Query 009283
Match_columns 538
No_of_seqs 219 out of 1705
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 23:00:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009283.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009283hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 3E-101 1E-105 834.9 57.7 492 25-534 2-542 (552)
2 3sqr_A Laccase; multicopper ox 100.0 3E-97 1E-101 797.6 50.9 468 24-533 65-564 (580)
3 1v10_A Laccase; multicopper bl 100.0 2.8E-97 1E-101 797.6 48.0 492 1-535 1-513 (521)
4 1zpu_A Iron transport multicop 100.0 3E-96 1E-100 790.5 52.2 473 25-533 1-503 (534)
5 3t6v_A Laccase; beta barrel, o 100.0 1.9E-95 6E-100 775.2 49.8 467 27-534 5-492 (495)
6 3pxl_A Laccase; 4-copper prote 100.0 4.8E-95 1.6E-99 772.0 51.0 465 27-534 4-492 (499)
7 2q9o_A Laccase-1; multicopper 100.0 1.3E-93 4.3E-98 774.8 49.2 476 23-534 30-544 (559)
8 1hfu_A Laccase 1; oxidoreducta 100.0 1.3E-93 4.6E-98 766.4 46.6 463 28-535 6-492 (503)
9 2xu9_A Laccase; oxidoreductase 100.0 3.5E-87 1.2E-91 706.1 40.5 400 22-511 12-439 (439)
10 2uxt_A Protein SUFI, SUFI; oxi 100.0 1.9E-86 6.4E-91 701.4 33.1 403 25-514 17-443 (451)
11 3abg_A Bilirubin oxidase; clea 100.0 3.6E-84 1.2E-88 695.2 38.8 417 26-514 36-477 (534)
12 3zx1_A Oxidoreductase, putativ 100.0 2.8E-83 9.5E-88 677.2 43.0 408 21-511 45-480 (481)
13 2wsd_A Spore coat protein A; o 100.0 2.5E-82 8.5E-87 680.8 41.2 428 25-514 24-512 (513)
14 3gyr_A PHS, phenoxazinone synt 100.0 1.3E-81 4.3E-86 693.6 40.0 441 24-515 30-594 (612)
15 3aw5_A Multicopper oxidase; be 100.0 2.5E-82 8.5E-87 668.8 31.6 389 26-510 20-447 (448)
16 3od3_A Blue copper oxidase CUE 100.0 2.4E-81 8.2E-86 662.0 38.0 411 25-510 16-488 (488)
17 2g23_A PHS, phenoxazinone synt 100.0 2.6E-79 8.8E-84 662.2 41.9 440 24-514 30-593 (612)
18 2j5w_A Ceruloplasmin, ferroxid 100.0 8.6E-55 3E-59 501.5 36.4 390 20-447 15-488 (1065)
19 3g5w_A Multicopper oxidase typ 100.0 1.2E-53 4E-58 430.5 31.5 266 25-297 1-278 (318)
20 2r7e_A Coagulation factor VIII 100.0 3.4E-56 1.2E-60 493.8 9.7 239 29-279 49-314 (742)
21 2zwn_A Two-domain type laccase 100.0 2.1E-52 7E-57 426.0 31.9 266 25-297 2-279 (339)
22 3kw8_A Laccase, putative coppe 100.0 1.2E-50 4E-55 401.3 25.0 246 22-516 3-269 (276)
23 2dv6_A Nitrite reductase; elec 100.0 1.8E-50 6.1E-55 428.4 27.2 398 23-515 25-436 (447)
24 1kbv_A ANIA, major outer membr 100.0 8.9E-50 3.1E-54 404.5 29.2 260 21-297 33-309 (327)
25 3tas_A Small laccase, multi-co 100.0 8.5E-50 2.9E-54 402.0 24.8 248 20-517 7-276 (313)
26 3t9w_A Small laccase, multi-co 100.0 6.7E-50 2.3E-54 399.7 23.0 137 21-166 24-178 (299)
27 3gdc_A Multicopper oxidase; be 100.0 6.1E-48 2.1E-52 384.2 29.1 232 25-279 33-273 (288)
28 2j5w_A Ceruloplasmin, ferroxid 100.0 3.3E-48 1.1E-52 446.8 20.0 385 43-514 616-1060(1065)
29 3cg8_A Laccase; oxidoreductase 100.0 1E-46 3.4E-51 383.6 27.4 243 23-515 45-309 (343)
30 2zoo_A Probable nitrite reduct 100.0 2.7E-46 9.2E-51 395.5 29.4 267 20-298 22-300 (442)
31 1mzy_A Copper-containing nitri 100.0 2.4E-45 8.2E-50 373.7 25.2 267 20-297 26-320 (333)
32 1oe1_A Dissimilatory copper-co 100.0 3.8E-45 1.3E-49 372.8 24.4 264 22-297 28-320 (336)
33 2bw4_A Copper-containing nitri 100.0 6.6E-45 2.3E-49 371.6 23.3 266 21-297 33-326 (340)
34 1sdd_B Coagulation factor V; c 100.0 6.3E-41 2.2E-45 369.9 26.0 263 23-294 3-326 (647)
35 2dv6_A Nitrite reductase; elec 100.0 3E-39 1E-43 342.2 31.0 255 24-297 161-435 (447)
36 1sdd_A Coagulation factor V; c 100.0 7.9E-42 2.7E-46 343.0 7.1 211 46-279 50-285 (306)
37 2r7e_B Coagulation factor VIII 100.0 1.1E-40 3.7E-45 370.2 12.5 248 23-279 130-441 (770)
38 2r7e_A Coagulation factor VIII 100.0 5.7E-37 1.9E-41 339.9 5.9 216 53-279 448-696 (742)
39 3gdc_A Multicopper oxidase; be 100.0 1.7E-30 5.7E-35 258.4 15.0 230 188-512 54-288 (288)
40 3g5w_A Multicopper oxidase typ 100.0 1.6E-29 5.3E-34 254.5 13.3 247 189-514 23-278 (318)
41 2zwn_A Two-domain type laccase 100.0 5.5E-29 1.9E-33 253.2 15.6 245 188-513 23-278 (339)
42 1sdd_A Coagulation factor V; c 99.9 3E-25 1E-29 222.4 2.4 232 191-513 52-301 (306)
43 1sdd_B Coagulation factor V; c 99.9 5.8E-22 2E-26 218.5 17.6 239 200-512 68-327 (647)
44 2bw4_A Copper-containing nitri 99.9 2.2E-21 7.4E-26 197.6 19.1 256 188-514 59-326 (340)
45 1kbv_A ANIA, major outer membr 99.9 8.2E-22 2.8E-26 199.3 15.3 245 188-514 58-309 (327)
46 2r7e_B Coagulation factor VIII 99.9 5.3E-23 1.8E-27 228.4 1.4 237 200-511 198-455 (770)
47 1mzy_A Copper-containing nitri 99.8 5.3E-20 1.8E-24 186.8 19.5 259 188-514 52-320 (333)
48 2zoo_A Probable nitrite reduct 99.8 3.4E-19 1.2E-23 187.9 16.0 248 188-515 48-300 (442)
49 1oe1_A Dissimilatory copper-co 99.8 2.1E-18 7.2E-23 175.2 20.3 258 188-514 53-320 (336)
50 2xu9_A Laccase; oxidoreductase 99.7 4.2E-15 1.4E-19 156.2 21.2 230 26-279 146-425 (439)
51 2uxt_A Protein SUFI, SUFI; oxi 99.7 5.7E-15 1.9E-19 155.5 21.9 234 26-279 152-426 (451)
52 3cvb_A Plastocyanin; cupredoxi 99.6 5.4E-17 1.8E-21 135.9 3.4 90 52-145 14-105 (105)
53 1v10_A Laccase; multicopper bl 99.6 6.7E-14 2.3E-18 150.0 21.4 227 45-279 191-476 (521)
54 3kw8_A Laccase, putative coppe 99.6 5.5E-15 1.9E-19 145.6 11.7 99 48-148 157-268 (276)
55 1hfu_A Laccase 1; oxidoreducta 99.6 9E-14 3.1E-18 148.4 21.9 248 28-279 143-455 (503)
56 3t6v_A Laccase; beta barrel, o 99.5 7.2E-13 2.5E-17 140.6 18.3 232 44-279 167-456 (495)
57 2cal_A Rusticyanin; iron respi 99.5 2.2E-13 7.5E-18 121.5 11.3 98 42-144 47-154 (154)
58 3zx1_A Oxidoreductase, putativ 99.5 2.4E-12 8.2E-17 135.8 20.9 238 27-279 181-466 (481)
59 1zpu_A Iron transport multicop 99.4 8.2E-12 2.8E-16 134.0 23.2 229 45-279 167-466 (534)
60 3pxl_A Laccase; 4-copper prote 99.4 2.7E-12 9.1E-17 136.3 17.5 231 45-279 166-456 (499)
61 1aoz_A Ascorbate oxidase; oxid 99.4 6.9E-12 2.4E-16 135.4 20.5 204 58-279 205-510 (552)
62 1iby_A Nitrosocyanin; RED copp 99.4 1.7E-12 5.7E-17 109.7 11.5 104 28-145 3-112 (112)
63 3cg8_A Laccase; oxidoreductase 99.4 8.4E-13 2.9E-17 133.8 11.4 104 48-153 198-314 (343)
64 2q9o_A Laccase-1; multicopper 99.4 1.2E-11 4.3E-16 133.4 20.4 233 45-279 195-506 (559)
65 3od3_A Blue copper oxidase CUE 99.4 3.2E-11 1.1E-15 127.2 20.6 247 27-279 151-475 (488)
66 3aw5_A Multicopper oxidase; be 99.3 2.1E-11 7.3E-16 128.0 18.6 226 27-279 138-434 (448)
67 1fwx_A Nitrous oxide reductase 99.3 3E-12 1E-16 136.5 10.8 95 41-147 497-594 (595)
68 2g23_A PHS, phenoxazinone synt 99.3 8.4E-11 2.9E-15 127.2 22.1 230 46-279 255-576 (612)
69 2aan_A Auracyanin A; cupredoxi 99.2 9.4E-12 3.2E-16 109.4 7.6 93 411-510 36-138 (139)
70 2wsd_A Spore coat protein A; o 99.2 9.2E-11 3.2E-15 125.4 16.5 216 45-279 230-495 (513)
71 3abg_A Bilirubin oxidase; clea 99.2 8.8E-11 3E-15 125.8 16.3 225 45-279 201-460 (534)
72 2ov0_A Amicyanin; beta-sandwic 99.2 3.2E-11 1.1E-15 100.5 8.9 78 51-144 27-105 (105)
73 3cvb_A Plastocyanin; cupredoxi 99.2 2.9E-11 9.9E-16 100.7 7.3 85 410-511 19-104 (105)
74 3sqr_A Laccase; multicopper ox 99.1 2.2E-09 7.5E-14 115.4 21.3 228 45-279 225-529 (580)
75 2gim_A Plastocyanin; beta shee 99.1 1.4E-10 4.8E-15 96.7 8.5 83 56-145 19-106 (106)
76 3tas_A Small laccase, multi-co 99.1 1.1E-09 3.7E-14 109.6 13.5 100 48-148 163-274 (313)
77 3t9w_A Small laccase, multi-co 99.0 1.8E-09 6.1E-14 107.2 12.1 100 48-148 179-290 (299)
78 2aan_A Auracyanin A; cupredoxi 99.0 1.4E-09 4.7E-14 95.4 10.0 90 53-144 31-139 (139)
79 3gyr_A PHS, phenoxazinone synt 98.9 3.4E-08 1.2E-12 108.1 20.6 90 189-279 459-576 (612)
80 1qhq_A Protein (auracyanin); e 98.9 8.2E-09 2.8E-13 90.5 12.5 91 54-145 30-140 (140)
81 2gim_A Plastocyanin; beta shee 98.9 2.9E-09 9.8E-14 88.6 8.2 85 410-511 20-105 (106)
82 4hci_A Cupredoxin 1; structura 98.9 5.8E-09 2E-13 85.9 8.6 79 51-144 22-100 (100)
83 2plt_A Plastocyanin; electron 98.8 2.9E-09 9.8E-14 87.3 5.5 79 57-144 18-98 (98)
84 3c75_A Amicyanin; copper prote 98.8 1.2E-08 4E-13 88.4 9.0 78 51-144 54-132 (132)
85 1pcs_A Plastocyanin; electron 98.8 3.6E-09 1.2E-13 86.7 3.8 81 56-144 18-98 (98)
86 1qhq_A Protein (auracyanin); e 98.8 1.8E-08 6.2E-13 88.3 8.5 96 411-511 34-139 (140)
87 1bxv_A Plastocyanin; copper pr 98.7 2E-08 6.9E-13 80.9 7.4 74 56-144 18-91 (91)
88 1pcs_A Plastocyanin; electron 98.7 1.3E-08 4.4E-13 83.3 6.2 78 410-510 19-97 (98)
89 1b3i_A PETE protein, protein ( 98.7 6E-08 2.1E-12 79.1 8.5 76 57-144 19-97 (97)
90 2plt_A Plastocyanin; electron 98.7 5.4E-08 1.9E-12 79.6 8.2 80 410-510 18-97 (98)
91 1kdj_A Plastocyanin; electron 98.7 5.1E-08 1.8E-12 80.4 7.8 79 56-144 16-102 (102)
92 3erx_A Pseudoazurin; copper pr 98.6 8.5E-08 2.9E-12 81.6 8.4 75 57-146 21-95 (123)
93 1bxv_A Plastocyanin; copper pr 98.6 8.9E-08 3E-12 77.1 8.1 72 410-510 19-90 (91)
94 1byp_A Protein (plastocyanin); 98.6 1.4E-07 4.8E-12 77.2 9.2 76 57-144 17-99 (99)
95 1plc_A Plastocyanin; electron 98.6 1.4E-07 4.9E-12 77.2 9.1 77 56-144 16-99 (99)
96 3tu6_A Pseudoazurin (blue copp 98.6 8E-08 2.8E-12 82.2 7.1 77 56-147 22-98 (127)
97 3ef4_A Pseudoazurin, blue copp 98.6 1.2E-07 4.2E-12 80.5 8.0 75 57-146 22-96 (124)
98 1b3i_A PETE protein, protein ( 98.6 3.8E-08 1.3E-12 80.3 4.1 77 411-510 20-96 (97)
99 1iby_A Nitrosocyanin; RED copp 98.5 2.4E-07 8.4E-12 77.7 7.9 73 411-511 39-111 (112)
100 1byp_A Protein (plastocyanin); 98.4 4.8E-07 1.6E-11 74.0 8.0 82 410-510 17-98 (99)
101 4hci_A Cupredoxin 1; structura 98.4 8.7E-07 3E-11 72.7 8.1 71 411-510 29-99 (100)
102 1iuz_A Plastocyanin; electron 98.4 4.6E-07 1.6E-11 74.0 5.9 77 56-144 17-98 (98)
103 1kdj_A Plastocyanin; electron 98.3 4.7E-07 1.6E-11 74.5 5.7 84 410-510 17-101 (102)
104 1paz_A Pseudoazurin precursor; 98.3 1.2E-06 4.2E-11 74.5 8.3 76 56-146 20-95 (123)
105 1cuo_A Protein (azurin ISO-2); 98.3 1.9E-06 6.4E-11 73.9 8.2 91 54-145 15-129 (129)
106 1pmy_A Pseudoazurin; electron 98.3 1.5E-06 5.2E-11 73.9 7.5 76 56-146 20-95 (123)
107 1id2_A Amicyanin; beta barrel, 98.2 8.8E-06 3E-10 67.3 10.0 76 53-144 30-106 (106)
108 1plc_A Plastocyanin; electron 98.2 2.4E-06 8.2E-11 69.8 6.2 83 409-510 16-98 (99)
109 3ay2_A Lipid modified azurin p 98.1 3.9E-06 1.3E-10 74.9 7.2 92 53-145 54-167 (167)
110 3sbq_A Nitrous-oxide reductase 98.1 1E-05 3.5E-10 84.7 10.0 92 45-146 546-638 (638)
111 1nwp_A Azurin; electron transp 98.0 3E-05 1E-09 66.2 9.9 91 53-144 14-128 (128)
112 2iaa_C Azurin; quinoprotein, t 98.0 3.5E-05 1.2E-09 65.8 9.9 92 53-145 13-128 (128)
113 2ccw_A Azurin II, AZN-2; elect 98.0 1.3E-05 4.5E-10 68.6 7.3 91 54-145 15-129 (129)
114 2cal_A Rusticyanin; iron respi 98.0 1.4E-05 4.6E-10 70.9 7.6 87 410-510 61-153 (154)
115 2ux6_A Pseudoazurin; type-1 co 98.0 1.6E-05 5.5E-10 67.4 7.5 73 57-146 21-93 (122)
116 2ov0_A Amicyanin; beta-sandwic 97.9 1.8E-05 6.1E-10 65.4 7.3 71 411-510 34-104 (105)
117 1fwx_A Nitrous oxide reductase 97.9 3.1E-05 1.1E-09 82.7 9.3 75 410-513 513-593 (595)
118 3ef4_A Pseudoazurin, blue copp 97.5 0.00016 5.6E-09 61.1 6.5 77 410-515 22-98 (124)
119 3tu6_A Pseudoazurin (blue copp 97.3 0.00025 8.6E-09 60.4 5.8 76 410-514 23-98 (127)
120 3erx_A Pseudoazurin; copper pr 97.3 0.00041 1.4E-08 58.7 7.0 74 410-512 21-94 (123)
121 3fsa_A Azurin; copper, cupredo 97.2 0.0018 6E-08 54.5 9.8 87 54-144 15-125 (125)
122 1iuz_A Plastocyanin; electron 97.2 0.00094 3.2E-08 54.0 8.0 80 410-510 18-97 (98)
123 1id2_A Amicyanin; beta barrel, 97.2 0.00077 2.6E-08 55.5 7.3 71 411-510 35-105 (106)
124 3c75_A Amicyanin; copper prote 97.1 0.0011 3.8E-08 56.8 7.2 71 411-510 61-131 (132)
125 2cua_A Protein (CUA); CUA cent 97.0 0.0038 1.3E-07 53.6 9.5 73 57-145 60-135 (135)
126 1paz_A Pseudoazurin precursor; 96.8 0.0033 1.1E-07 53.1 7.7 74 411-513 22-95 (123)
127 3s8f_B Cytochrome C oxidase su 96.7 0.0088 3E-07 53.2 9.7 83 49-145 85-168 (168)
128 1pmy_A Pseudoazurin; electron 96.5 0.0045 1.5E-07 52.3 6.7 38 472-513 58-95 (123)
129 3sbq_A Nitrous-oxide reductase 96.5 0.0072 2.5E-07 63.5 8.8 75 410-511 558-636 (638)
130 3ay2_A Lipid modified azurin p 96.3 0.012 3.9E-07 52.4 8.3 91 411-511 59-166 (167)
131 2ux6_A Pseudoazurin; type-1 co 96.1 0.016 5.3E-07 48.8 7.5 71 411-512 22-92 (122)
132 1cuo_A Protein (azurin ISO-2); 95.8 0.026 8.9E-07 47.9 7.8 93 410-511 18-128 (129)
133 2cua_A Protein (CUA); CUA cent 95.4 0.05 1.7E-06 46.5 8.1 70 412-511 62-134 (135)
134 2iaa_C Azurin; quinoprotein, t 95.4 0.064 2.2E-06 45.4 8.7 91 411-511 18-127 (128)
135 2ccw_A Azurin II, AZN-2; elect 95.0 0.14 4.8E-06 43.3 9.5 96 411-511 19-128 (129)
136 1nwp_A Azurin; electron transp 94.7 0.14 4.8E-06 43.2 8.8 92 411-510 19-127 (128)
137 3s8f_B Cytochrome C oxidase su 93.7 0.25 8.5E-06 43.7 8.6 72 412-511 95-167 (168)
138 3fsa_A Azurin; copper, cupredo 93.1 0.52 1.8E-05 39.4 9.1 93 410-510 18-124 (125)
139 3isy_A Bsupi, intracellular pr 89.8 4 0.00014 33.7 11.1 71 207-278 16-101 (120)
140 1cyx_A CYOA; electron transpor 77.8 3.2 0.00011 37.7 5.7 76 411-514 42-119 (205)
141 1cyx_A CYOA; electron transpor 71.2 8.8 0.0003 34.8 6.7 74 57-144 41-115 (205)
142 2f1e_A Protein APAG; APAG prot 64.9 6 0.00021 33.0 4.0 49 68-116 34-88 (127)
143 3hb3_B Cytochrome C oxidase su 64.2 10 0.00034 36.6 6.0 76 411-514 190-266 (298)
144 3isy_A Bsupi, intracellular pr 64.1 59 0.002 26.6 10.9 75 43-128 20-100 (120)
145 1yew_A Particulate methane mon 63.4 16 0.00055 35.8 7.2 69 44-118 251-336 (382)
146 2gsm_B Cytochrome C oxidase su 62.8 10 0.00036 35.8 5.8 76 411-514 172-248 (262)
147 1xvs_A Protein APAG; MCSG APC2 62.2 6 0.00021 32.9 3.5 49 68-116 33-87 (126)
148 1xq4_A Protein APAG; all beta 60.5 8.3 0.00028 32.7 4.1 49 68-116 38-92 (139)
149 1v54_B Cytochrome C oxidase po 59.8 12 0.00042 34.5 5.6 77 410-514 140-217 (227)
150 2gsm_B Cytochrome C oxidase su 58.9 26 0.0009 33.0 7.8 75 57-146 171-247 (262)
151 3hb3_B Cytochrome C oxidase su 57.2 29 0.00099 33.4 7.9 77 57-147 189-266 (298)
152 2r39_A FIXG-related protein; s 56.9 27 0.00093 28.3 6.7 46 210-265 34-81 (118)
153 1tza_A APAG protein, SOR45; st 55.9 7.4 0.00025 32.7 3.0 49 68-116 33-87 (134)
154 1v54_B Cytochrome C oxidase po 46.4 30 0.001 31.9 5.9 76 56-146 139-216 (227)
155 2wtp_A ORF131 protein, CZCE; m 46.3 7.9 0.00027 32.2 1.6 23 58-85 72-94 (131)
156 1nep_A EPV20, BNPC2, epididyma 46.2 25 0.00086 29.2 4.9 69 48-117 18-95 (130)
157 1fft_B Ubiquinol oxidase; elec 46.1 14 0.00049 35.8 3.8 75 411-513 152-228 (315)
158 1xwv_A DER F II; beta sheets, 45.7 29 0.00098 28.8 5.2 62 56-117 24-93 (129)
159 2x3c_A Toxic extracellular end 43.9 45 0.0016 32.7 7.1 15 103-117 96-110 (343)
160 3rfr_A PMOB; membrane, oxidore 43.6 60 0.002 32.2 7.6 76 66-142 301-410 (419)
161 1x9u_A Umecyanin; cupredoxin, 39.3 27 0.00093 28.5 3.9 77 58-147 27-107 (116)
162 4ac7_B Urease subunit beta; hy 35.9 54 0.0018 26.9 5.0 59 58-116 18-89 (126)
163 4ubp_B Protein (urease (chain 35.9 54 0.0018 26.9 5.0 59 58-116 18-89 (126)
164 3q48_A Chaperone CUPB2; IG fol 34.8 57 0.002 30.6 5.9 32 43-74 58-102 (257)
165 2r5o_A Putative ATP binding co 34.1 1E+02 0.0036 27.0 7.3 85 190-279 53-146 (188)
166 2p9r_A Alpha-2-M, alpha-2-macr 31.9 75 0.0026 24.6 5.4 68 205-278 13-84 (102)
167 3idu_A Uncharacterized protein 31.8 2.1E+02 0.0073 23.4 10.0 66 204-278 28-96 (127)
168 2qjv_A Uncharacterized IOLB-li 30.0 1.9E+02 0.0066 27.1 8.6 62 212-278 50-111 (270)
169 2wtp_A ORF131 protein, CZCE; m 28.0 23 0.00079 29.4 1.6 21 200-220 70-90 (131)
170 2h7w_A Chagasin; beta-strands, 27.8 2.4E+02 0.0083 23.2 8.0 64 56-122 32-103 (131)
171 2xzz_A Protein-glutamine gamma 24.7 70 0.0024 25.3 3.9 54 65-123 22-79 (102)
172 1ws8_A Mavicyanin; oxidized fo 24.1 78 0.0027 25.3 4.1 37 111-148 71-107 (109)
173 3qga_A UREA2, fusion of urease 23.9 2.3E+02 0.0078 25.6 7.4 64 53-116 105-188 (225)
174 2x3c_A Toxic extracellular end 23.4 3.8E+02 0.013 26.0 9.8 46 232-278 67-127 (343)
175 1fft_B Ubiquinol oxidase; elec 22.9 44 0.0015 32.4 2.8 74 57-144 151-225 (315)
176 1x9u_A Umecyanin; cupredoxin, 21.1 85 0.0029 25.4 3.8 34 481-514 73-107 (116)
177 1jer_A Cucumber stellacyanin; 20.4 1.2E+02 0.004 25.5 4.6 39 113-152 76-115 (138)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=3.3e-101 Score=834.94 Aligned_cols=492 Identities=29% Similarity=0.543 Sum_probs=393.6
Q ss_pred CeEEEEEEEEEEEecCCCeeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCC-CCceeeeccccCCCCCCCCCCCC-CCC
Q 009283 25 PYRFFNWNVTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALD-EPFLISWNGVQQRRNSWQDGVYG-TNC 102 (538)
Q Consensus 25 ~~~~~~l~~~~~~~~~~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~~~~~DG~~~-tq~ 102 (538)
.+|+|+|+|++..+.+||.++.+|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||+++.+++++||+++ |||
T Consensus 2 ~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq~ 81 (552)
T 1aoz_A 2 QIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQC 81 (552)
T ss_dssp CEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTBC
T ss_pred eEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCcccccC
Confidence 5799999999999999999999999999999999999999999999999998 99999999999999899999999 999
Q ss_pred CCCCCCeEEEEEEecCCccceeeecCchhhhhcceeeEEEEecCCCCCCCCCCCCCceEEEEeeecccChhhHHHHhccC
Q 009283 103 PIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSG 182 (538)
Q Consensus 103 ~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~ 182 (538)
+|+||++|+|+|++ +++||||||||.+.|+.+||+|+|||++++....++ ..|+|++|+++||+++....+...+...
T Consensus 82 ~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~~ 159 (552)
T 1aoz_A 82 AINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSSK 159 (552)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSS-CCSEEEEEEEEEECSSCHHHHHHHTTSS
T ss_pred CcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCC-CCCccceEEeecccCCCHHHHHhhhhcc
Confidence 99999999999999 699999999999999999999999999986555556 3468999999999998765554333221
Q ss_pred --CCCCCCCeEEEcCCCCC------------------------CceEEEecCCEEEEEEEecCCCceEEEEEeCCeeEEE
Q 009283 183 --SDLPFPDGLVINGRGSN------------------------ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLV 236 (538)
Q Consensus 183 --~~~~~~~~~liNG~~~~------------------------~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~vi 236 (538)
.....++.++|||+... .+.++|++|++|||||||+|..+.+.|+|+||+|+||
T Consensus 160 ~~~~~~~~~~~liNG~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi 239 (552)
T 1aoz_A 160 PIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVV 239 (552)
T ss_dssp SCCCCCSCSEEEETTBCCSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEE
T ss_pred cccCCCCCCeEEECCccccCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEE
Confidence 12245789999999842 0179999999999999999999999999999999999
Q ss_pred EEcCeecccceecEEEEcCCCeEEEEEEe-CCCCcceEEEEEeecc-CCccceEEEEEecCCCCC--CCCCCCCCCC-cc
Q 009283 237 EVEGTHTLQNTYDSLDIHLGQSYSVLVRA-DQPPQGYYIVISTRFT-SQVLSATSVLHYSNSAGS--VSGPPPGGPT-TQ 311 (538)
Q Consensus 237 a~DG~~~~p~~~~~v~l~pgeR~dv~v~~-~~~~g~y~i~~~~~~~-~~~~~~~ail~y~~~~~~--~~~~~p~~P~-~~ 311 (538)
++||.+++|+.++++.|+|||||||+|++ ++++|+|||++....+ .......|+|+|.++... ...+.|..|. .+
T Consensus 240 ~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~ 319 (552)
T 1aoz_A 240 EADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDD 319 (552)
T ss_dssp EETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESSCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCTTC
T ss_pred EECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcccCCCCCccEEEEEEECCCCCCCCCCCCCCCCCcccc
Confidence 99999999999999999999999999999 4568999999987543 234578899999876531 1111222221 11
Q ss_pred ccchhhhhhhhcccCCCCCCCCCCCCCCCccccccceEEEEecccCCCCCeEeEEECCeeecCCCCchhhhcccCCCCcc
Q 009283 312 IDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVF 391 (538)
Q Consensus 312 ~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~P~l~~~~~~~~g~~ 391 (538)
..... ...+. .+....+.+.+ ...++++.+.......++...|+|||++|..++.|+|.+.+.++.|.|
T Consensus 320 ~~~~~--~~~l~-~l~~~~~~~~~--------~~~~~~~~l~~~~~~~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~ 388 (552)
T 1aoz_A 320 FDRSK--NFTYR-ITAAMGSPKPP--------VKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAF 388 (552)
T ss_dssp HHHHH--HHHTT-CCBCTTCCCCC--------SSCSEEEEEEEEEEEETTEEEEEETTEEECCCSSCHHHHHHTTCTTSS
T ss_pred ccccc--ccccc-ccccCCCCCCC--------CCCcEEEEEEEeeccCCCeEEEEECCCccCCCCCCHHHHHhhcCcccc
Confidence 11000 00111 11110011111 134566666543222345678999999999889999988766666666
Q ss_pred ccCCCCC---------CC-CCCCcceeeEEEEccCCcEEEEEEEcCCC------CCCCccccCCCceEEeecCCCCCCCC
Q 009283 392 SVGSIPD---------NP-TGGGAYLQTSVMAADFRGFAEVVFENPED------TLQSWHIDGHNFFAVGMDGGEWTPAS 455 (538)
Q Consensus 392 ~~~~~~~---------~p-~~~~~~~~~~~~~~~~g~~v~~~l~N~~~------~~HP~HlHG~~F~Vl~~~~g~~~~~~ 455 (538)
+.+.... .| .....+.++.++.++.|++|+|+|+|.+. +.||||||||+||||+++.|.|++..
T Consensus 389 ~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~ 468 (552)
T 1aoz_A 389 DQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEE 468 (552)
T ss_dssp CCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGG
T ss_pred ccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCccc
Confidence 5322111 01 11244667888999999999999999874 45999999999999999988887744
Q ss_pred CCCcCCCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhhhhcceEEEEEEecCCCcCCccCCCCCchhcccccc
Q 009283 456 RLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAV 534 (538)
Q Consensus 456 ~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~p~~~~~~~~~~p~~~~~c~~~~ 534 (538)
...+|+.+|.|||||.|+++||++|||+|||||.|+|||||++|++.|||++|.+. +++ ++++|+++++|+.++
T Consensus 469 ~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~-~~~----~~~~P~~~~~C~~~~ 542 (552)
T 1aoz_A 469 ESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEG-VEK----VGRIPTKALACGGTA 542 (552)
T ss_dssp GGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC-GGG----CCCCCHHHHSSHHHH
T ss_pred ccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeC-chh----hccCCcchhhhhccC
Confidence 56789999999999999999999999999999999999999999999999999874 332 367899999999875
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=3e-97 Score=797.56 Aligned_cols=468 Identities=24% Similarity=0.354 Sum_probs=373.7
Q ss_pred CCeEEEEEEEEEEEecCCCeeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCC-CCceeeeccccCCCCCCCCCCCC-CC
Q 009283 24 SPYRFFNWNVTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALD-EPFLISWNGVQQRRNSWQDGVYG-TN 101 (538)
Q Consensus 24 ~~~~~~~l~~~~~~~~~~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~~~~~DG~~~-tq 101 (538)
+.+++|+|++++..+.+||+.+.+|+|||++|||+|++++||+|+|+|+|+|+ ++++|||||++|.+++++||+++ ||
T Consensus 65 ~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vTq 144 (580)
T 3sqr_A 65 GVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVTQ 144 (580)
T ss_dssp CCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTTB
T ss_pred ceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCcccc
Confidence 45789999999999999999999999999999999999999999999999998 89999999999998899999999 99
Q ss_pred CCCCCCCeEEEEEEecCCccceeeecCchhhhhcceeeEEEEecCCCCCCCCCCCCCce-EEEEeeecccChhhHHHHhc
Q 009283 102 CPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASRPLIPVPFDPPAGDF-TILAGDWYKKNHTDLKAILD 180 (538)
Q Consensus 102 ~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~-~l~l~d~~~~~~~~~~~~~~ 180 (538)
|||+||++|+|+|++. ++||||||||.+.|+.+||+|+|||++++. .+| |.|. +|+|+||+++...++.....
T Consensus 145 ~pI~PG~sftY~f~~~-q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~--~~y---D~d~~~l~l~Dw~~~~~~~~~~~~~ 218 (580)
T 3sqr_A 145 CPIAPGDTLTYKFQVT-QYGTTWYHSHFSLQYGDGLFGPLIINGPAT--ADY---DEDVGVIFLQDWAHESVFEIWDTAR 218 (580)
T ss_dssp CCBCTTCEEEEEEECC-CCEEEEEEECSTTGGGGTCEEEEEEECCCS--SCC---SEEEEEEEEEEECSSCHHHHHHHHT
T ss_pred CCCCCCCeEEEEEECC-CCcceEEeecccccccCcCEEEEEeeCccc--CCC---CccceEEEEEEEecCCHHHHHHHHh
Confidence 9999999999999995 899999999999999999999999998763 334 7787 99999999998776654433
Q ss_pred cCCCCCCCCeEEEcCCCCC---------------CceEEEecCCEEEEEEEecCCCceEEEEEeCCeeEEEEEcCeeccc
Q 009283 181 SGSDLPFPDGLVINGRGSN---------------ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQ 245 (538)
Q Consensus 181 ~~~~~~~~~~~liNG~~~~---------------~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p 245 (538)
. ...+.+++++|||+... .+.++|++|++|||||||+|..+.+.|+|+||+|+||++||.+++|
T Consensus 219 ~-~~~~~~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~~v~P 297 (580)
T 3sqr_A 219 L-GAPPALENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVP 297 (580)
T ss_dssp T-SCCCCBSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEE
T ss_pred c-cCCCCCceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCccCCc
Confidence 3 23567899999999742 3799999999999999999999999999999999999999999999
Q ss_pred ceecEEEEcCCCeEEEEEEeCCCCcceEEEEEeecc----CCccceEEEEEecCCCCCCCCCCCCCCC-ccccchhhhhh
Q 009283 246 NTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFT----SQVLSATSVLHYSNSAGSVSGPPPGGPT-TQIDWSLEQAR 320 (538)
Q Consensus 246 ~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~----~~~~~~~ail~y~~~~~~~~~~~p~~P~-~~~~~~~~~~~ 320 (538)
+.++++.|+|||||||+|++++++|+|||++..... .......|||+|.++... .|..+. ...+..+.
T Consensus 298 ~~~~~l~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~----~P~~~~~~~~~~~~~--- 370 (580)
T 3sqr_A 298 YTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIA----NPTSVGTTPRGTCED--- 370 (580)
T ss_dssp EEESSEEECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCC----CCCCCCCCCCCCSCC---
T ss_pred eEeeEEEEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCC----CCCCCCCCccchhhc---
Confidence 999999999999999999999888999999976531 123468999999875421 111111 11000010
Q ss_pred hhcccCCCCCCCCCCCCCCCccccccceEEEEecccCCCCCeEeEEECCeeec-CCCCchhhhcccCCCCccccCCCCCC
Q 009283 321 SLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFI-PADTPLKLADYFKIPGVFSVGSIPDN 399 (538)
Q Consensus 321 ~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~-~p~~P~l~~~~~~~~g~~~~~~~~~~ 399 (538)
.....|.+..+.+.|. ....+.++.+. .++...|+|||++|. +++.|+|++.+. |. .+.
T Consensus 371 ~~~~~L~P~~~~~~~~------~~~~~~~l~~~-----~~~~~~w~iN~~s~~~~~~~P~L~~~~~---g~------~~~ 430 (580)
T 3sqr_A 371 EPVASLVPHLALDVGG------YSLVDEQVSSA-----FTNYFTWTINSSSLLLDWSSPTTLKIFN---NE------TIF 430 (580)
T ss_dssp SCGGGCCBSSCCBCCS------EEEEEEEEEEE-----ESSSEEEEETTBCCCCCTTSCHHHHHHT---TC------CCC
T ss_pred ccccccccCCCCCCCC------ccceEEEEEec-----cCCceeEEECCEecccCCCCCchhhhhc---CC------ccC
Confidence 0001233322222221 11223334342 245678999999997 578998876432 11 011
Q ss_pred CCCCCcceeeEEEEcc----CCcEEEEEEEcCC--CCCCCccccCCCceEEeecCCCCCCCC-CCCcCCCCCCceeeEEe
Q 009283 400 PTGGGAYLQTSVMAAD----FRGFAEVVFENPE--DTLQSWHIDGHNFFAVGMDGGEWTPAS-RLTYNLRDTISRCTVQV 472 (538)
Q Consensus 400 p~~~~~~~~~~~~~~~----~g~~v~~~l~N~~--~~~HP~HlHG~~F~Vl~~~~g~~~~~~-~~~~~~~~p~~rDTv~v 472 (538)
|. ...++.++ .|++|||+|+|.+ .+.||||||||+||||++|.|.|++.. +..+|+.+|.+|||+.|
T Consensus 431 ~~------~~~~~~~~~~~~~~~~VeiVi~n~~~~~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v 504 (580)
T 3sqr_A 431 PT------EYNVVALEQTNANEEWVVYVIEDLTGFGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAAL 504 (580)
T ss_dssp CG------GGCEEEECC----CCEEEEEEEECSSSCCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEE
T ss_pred CC------CcceeecccccCCCcEEEEEEeCCCccccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEe
Confidence 22 23344444 6999999999988 789999999999999999999998653 46799999999999999
Q ss_pred CCCCEEEEEEEccCcceeeeeecchhhhhcceEEEEEEecCCCcCCccCCCCCch-hccccc
Q 009283 473 YPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNA-LLCGRA 533 (538)
Q Consensus 473 p~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~p~~~~~~~~~~p~~~-~~c~~~ 533 (538)
+++||++|||++||||.|+|||||++|++.||+++|.+ .++++ .+..++|++. ..|..|
T Consensus 505 ~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e-~~~~i-~~~~~~~~~~~~~C~~~ 564 (580)
T 3sqr_A 505 PGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVE-SQSSI-AVKMTDTAIFEDTCANW 564 (580)
T ss_dssp CTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEE-SGGGC-CCCHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEE-CHHHH-hhccCCcHHHHHhhHHH
Confidence 99999999999999999999999999999999999976 45443 2222366664 588665
No 3
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=2.8e-97 Score=797.60 Aligned_cols=492 Identities=24% Similarity=0.339 Sum_probs=365.8
Q ss_pred CcchhhHHHHHHHHHHHhccccCCCeEEEEEEEEEEEecCCCe-eeEEEEEcCcCcCceEEEecCCEEEEEEEeCCC---
Q 009283 1 MASYSSICCLLLVFMLVSCTRGESPYRFFNWNVTYGDIYPLGV-KQQGILINGQFPGPSIEAVTNDNLIISVFNALD--- 76 (538)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~G~-~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~--- 76 (538)
|.++++++.++++++. . +.++...+|+|++++..+.+||+ .+++|+|||++|||+||+++||+|+|+|+|+|+
T Consensus 1 ~~~~~~~~~~~~~~~~-~--~~~~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~ 77 (521)
T 1v10_A 1 MPSFASLKSLVVLSLT-S--LSLAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDAN 77 (521)
T ss_dssp ------------------------CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTT
T ss_pred CchhHHHHHHHHHHhh-h--hhcccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCcc
Confidence 4555555554333333 2 22344568999999999999999 999999999999999999999999999999999
Q ss_pred --CCceeeeccccCCCCCCCCCCCC-CCCCCCCCCeEEEEEEecCCccceeeecCchhhhhcceeeEEEEecCCCC-CCC
Q 009283 77 --EPFLISWNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASRPLI-PVP 152 (538)
Q Consensus 77 --~~~siH~HG~~~~~~~~~DG~~~-tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~ 152 (538)
++++|||||+++.+++++||+++ |||+|.||++|+|+|++.+++||||||||.+.|+.+||+|+|||+++++. +.+
T Consensus 78 ~~~~tsiHwHGl~~~~~~~~DGv~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~ 157 (521)
T 1v10_A 78 MRRATSIHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSL 157 (521)
T ss_dssp SCCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGG
T ss_pred CCCCceEecCCeeccCCCccCCCcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCccccccc
Confidence 99999999999988899999999 99999999999999997678999999999999999999999999987532 223
Q ss_pred CCCCCCceEEEEeeecccChhhHHHHhccCCCCCCCCeEEEcCCCCC--------CceEEEecCCEEEEEEEecCCCceE
Q 009283 153 FDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSN--------ANTFTVDQGKTYRFRISNVGISTSI 224 (538)
Q Consensus 153 ~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~--------~p~~~v~~G~~~rlRliN~~~~~~~ 224 (538)
|+..++|++|+++||+++..+++.. ..+...+.+|.++|||+... .+.++|++|++|||||||+|..+.+
T Consensus 158 ~~~d~~e~~l~l~D~~~~~~~~~~~--~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~ 235 (521)
T 1v10_A 158 YDVDDASTVITIADWYHSLSTVLFP--NPNKAPPAPDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNY 235 (521)
T ss_dssp CSBCSGGGEEEEEEECSSCCC---------CCCSCCSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCE
T ss_pred CCCCCceeEEEEcccccCCHHHHhh--ccCCCCCCCCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccE
Confidence 5444579999999999987766532 12223467899999999841 1899999999999999999999999
Q ss_pred EEEEeCCeeEEEEEcCeecccceecEEEEcCCCeEEEEEEeCCCCcceEEEEEeeccCC---ccceEEEEEecCCCCCCC
Q 009283 225 NFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQ---VLSATSVLHYSNSAGSVS 301 (538)
Q Consensus 225 ~~~l~gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~---~~~~~ail~y~~~~~~~~ 301 (538)
.|+|+||+|+||++||.+++|+.++++.|+|||||||+|++++++|+|+|++....... .....++|+|.+.....+
T Consensus 236 ~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p 315 (521)
T 1v10_A 236 AFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEP 315 (521)
T ss_dssp EEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCC
T ss_pred EEEECCCeEEEEecCCccccceeeeeEEEcccceEEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCC
Confidence 99999999999999999999999999999999999999999977899999997653211 112369999987653211
Q ss_pred CCCCCCCCccccchhhhhhhhcccCCCCCCCCCCCCCCCccccccceEEEEecccCCCCCeEeEEECCeeecCCCCchhh
Q 009283 302 GPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKL 381 (538)
Q Consensus 302 ~~~p~~P~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~P~l~ 381 (538)
...+. +.. .+. +..+.+....+.|..... ...++++.+.... .+....|+|||++|..+..|+|.
T Consensus 316 ~~~~~-~~~----~~~-----~~~l~p~~~~~~p~~~~~---~~~~~~~~l~~~~--~~~~~~~~iNg~~~~~~~~P~l~ 380 (521)
T 1v10_A 316 TTSQN-SGT----ALN-----EANLIPLINPGAPGNPVP---GGADINLNLRIGR--NATTADFTINGAPFIPPTVPVLL 380 (521)
T ss_dssp CCCCC-CSC----BCC-----GGGCCBSSCCCCSSCSST---TCSSEEEECCEEC--CSSSSCCEESSCCCCCCSSCHHH
T ss_pred CCCCC-ccc----ccc-----hhhcccCCcccCCCcccC---CcceEEEEEEEec--CCceeEEEECCCcccCCCCchhh
Confidence 11000 000 011 011222211111111000 1234455544211 11224799999999988889887
Q ss_pred hcccCCCCccccCCCCCCCCCCCcceeeEEEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCC
Q 009283 382 ADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNL 461 (538)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~ 461 (538)
+.+. |.++.. ..+.+..++.++.|++|||+++| .+.||||||||+||||+++++. .+++
T Consensus 381 ~~~~---g~~~~~---------~~~~~~~~~~v~~g~~vei~l~N--~~~HP~HLHGh~F~Vl~~~~~~-------~~n~ 439 (521)
T 1v10_A 381 QILS---GVTNPN---------DLLPGGAVISLPANQVIEISIPG--GGNHPFHLHGHNFDVVRTPGSS-------VYNY 439 (521)
T ss_dssp HHHH---TCCCGG---------GSSSTTTEEEECTTCEEEEEEEC--CBSCEEEESSCCEEEEECTTCS-------CCCC
T ss_pred hhhc---CCcccc---------cCCCCceEEEecCCCEEEEEEcC--CCCCCEEEccceEEEEecCCCC-------cccc
Confidence 6432 211100 11123567889999999999999 6899999999999999997653 2577
Q ss_pred CCCCceeeEEe-CCCCEEEEEEEccCcceeeeeecchhhhhcceEEEEEEecCCCcCCccCCCCC-chhccccccC
Q 009283 462 RDTISRCTVQV-YPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPS-NALLCGRAVG 535 (538)
Q Consensus 462 ~~p~~rDTv~v-p~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~p~~~~~~~~~~p~-~~~~c~~~~~ 535 (538)
.+|.|||||.| ++++|++|||++||||.|+|||||++|++.|||++|.|... ++ .+..++|+ +.+.|..|..
T Consensus 440 ~~p~~rDTV~V~p~gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~-~~-~~~~~~p~~~~~~C~~~~~ 513 (521)
T 1v10_A 440 VNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIP-NI-PIANAISPAWDDLCPKYNA 513 (521)
T ss_dssp SSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESGG-GH-HHHSCCCHHHHTHHHHHTT
T ss_pred CCCCeeeeEEeCCCCcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCc-ch-hhccCCChHHhhhchhhhc
Confidence 89999999999 89999999999999999999999999999999999987543 32 23455675 5789988765
No 4
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-96 Score=790.45 Aligned_cols=473 Identities=25% Similarity=0.352 Sum_probs=371.3
Q ss_pred CeEEEEEEEEEEEecCCC-eeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCC-CCceeeeccccCCCCCCCCCCCC-CC
Q 009283 25 PYRFFNWNVTYGDIYPLG-VKQQGILINGQFPGPSIEAVTNDNLIISVFNALD-EPFLISWNGVQQRRNSWQDGVYG-TN 101 (538)
Q Consensus 25 ~~~~~~l~~~~~~~~~~G-~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~~~~~DG~~~-tq 101 (538)
++|+|+|++++..+.+|| ..+++|+|||++|||+|++++||+|+|+|+|+|+ ++++|||||+++..++++||+++ ||
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 478999999999999999 7999999999999999999999999999999999 99999999999998899999999 99
Q ss_pred CCCCCCCeEEEEEEecCCccceeeecCchhhhhcceeeEEEEecCCCCCCCCCCCCCceEEEEeeecccChhhHHHHh-c
Q 009283 102 CPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAIL-D 180 (538)
Q Consensus 102 ~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~-~ 180 (538)
|+|+||++|+|+|++++++||||||||.+.|+.+||+|+|||++++. ++ .+|+|++|+++||+++...++...+ .
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~---p~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 156 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF---PY-DYDEELSLSLSEWYHDLVTDLTKSFMS 156 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC---CS-CCSEEEEEEEEEECSSCHHHHHHHHSS
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC---CC-CCcceEEEEeeccccCCHHHHHHHHhc
Confidence 99999999999999976899999999999999999999999999753 33 4488999999999999877664332 2
Q ss_pred ---cCCCCCCCCeEEEcCCCCCCceEEEecCCEEEEEEEecCCCceEEEEEeCCeeEEEEEcCeecccceecEEEEcCCC
Q 009283 181 ---SGSDLPFPDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQ 257 (538)
Q Consensus 181 ---~~~~~~~~~~~liNG~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~~~v~l~pge 257 (538)
.....+.++.+||||+. .+.++|++||+|||||||+|..+.+.|+|+||+|+||++||.+++|+.++++.|+|||
T Consensus 157 ~~~~~g~~~~~d~~liNG~~--~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~l~~gq 234 (534)
T 1zpu_A 157 VYNPTGAEPIPQNLIVNNTM--NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQ 234 (534)
T ss_dssp TTCTTCCCCCCSEEEETTBS--SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESCEEECTTC
T ss_pred cccCCCCCCCCceEEECCCC--ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccccEeceEEECccc
Confidence 12234678999999999 8999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEeCCC-CcceEEEEEeecc-------CCccceEEEEEecCCCCCCCCCCCCCCC-ccccchhhhhhhhcccCCC
Q 009283 258 SYSVLVRADQP-PQGYYIVISTRFT-------SQVLSATSVLHYSNSAGSVSGPPPGGPT-TQIDWSLEQARSLRRNLTA 328 (538)
Q Consensus 258 R~dv~v~~~~~-~g~y~i~~~~~~~-------~~~~~~~ail~y~~~~~~~~~~~p~~P~-~~~~~~~~~~~~~~~~l~~ 328 (538)
||||+|++++. .++|+|++..... .......++|+|.++... |..+. ......+. . ..+.+
T Consensus 235 R~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~-----p~~~~~~~~~~~~~---~--~~l~p 304 (534)
T 1zpu_A 235 RYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAAL-----PTQNYVDSIDNFLD---D--FYLQP 304 (534)
T ss_dssp EEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCB-----CCCCCCSCSSCSCC---G--GGCCB
T ss_pred eEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCC-----CCCCcccccccccc---c--cccee
Confidence 99999999864 4789999876422 123467899999875421 11110 01000011 0 01111
Q ss_pred CCCCCCCCCCCCccccccceEEEEecccC-CCCCeEeEEECCeeecCCCCchhhhcccCCCCccccCCCCCCCCCCCcce
Q 009283 329 SGPRPNPQGSYHYGLINTTHTIRLQNTAP-TINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYL 407 (538)
Q Consensus 329 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~iNg~~f~~p~~P~l~~~~~~~~g~~~~~~~~~~p~~~~~~~ 407 (538)
....+.+ ...++++.+..... ..++...|+|||++|..+++|+|.+.+. .+.+.. ++. ....
T Consensus 305 ~~~~~~~--------~~~~~~~~l~~~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~--~~~~~~-----~~~--~~~~ 367 (534)
T 1zpu_A 305 YEKEAIY--------GEPDHVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTVLS--SGDQAN-----NSE--IYGS 367 (534)
T ss_dssp SSCCCCC--------CSCSEEEEEEEEEEECTTSCEEEEETTBCCCCCSSCHHHHHTT--SGGGTT-----CGG--GGCS
T ss_pred CCCCCCC--------CCCCeEEEEEEEeeccCCceeEEEECCCcccCCCCCceeeecc--cCcccC-----CCc--ccCC
Confidence 1111111 12345555543211 1345567999999999999998876532 121110 111 1111
Q ss_pred eeEEEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCC----------CCCCCCCCCcCCCCCCceeeEEeCCCCE
Q 009283 408 QTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGG----------EWTPASRLTYNLRDTISRCTVQVYPKSW 477 (538)
Q Consensus 408 ~~~~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g----------~~~~~~~~~~~~~~p~~rDTv~vp~~g~ 477 (538)
++.++.++.|++|+|+|+|.+.+.||||||||+||||+++.+ .|++.....+ ..+|.|||||.|++++|
T Consensus 368 ~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~-~~~p~~RDTv~V~pgg~ 446 (534)
T 1zpu_A 368 NTHTFILEKDEIVEIVLNNQDTGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAF-PEYPMRRDTLYVRPQSN 446 (534)
T ss_dssp SSCEEEECTTCEEEEEEEECSSSCEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCC-CSSCEEESEEEECTTCE
T ss_pred CceEEEeCCCCEEEEEEeCCCCCCCCeEecCCceEEEeecCCccccccCcccccCccccccc-cCCCCeeeEEEeCCCCE
Confidence 356788999999999999999899999999999999999864 3433222222 46899999999999999
Q ss_pred EEEEEEccCcceeeeeecchhhhhcceEEEEEEecCCCcCCcc--CCCCCch-hccccc
Q 009283 478 TAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDE--YPIPSNA-LLCGRA 533 (538)
Q Consensus 478 ~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~p~~~~~~~--~~~p~~~-~~c~~~ 533 (538)
++|||++||||.|+|||||++|++.|||++|.+. |+++ .+. .++|++. +.|..+
T Consensus 447 v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~-~~~~-~~~~~~~~p~~~~~~C~~~ 503 (534)
T 1zpu_A 447 FVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVED-PFGI-QDAHSQQLSENHLEVCQSC 503 (534)
T ss_dssp EEEEEECCSCEEEEEEECCHHHHHTTCEEEEEEC-HHHH-HHCGGGSCCHHHHHHHHHT
T ss_pred EEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEEC-cccc-ccccccCCChhHhhhhhcc
Confidence 9999999999999999999999999999999765 3332 222 5667765 577544
No 5
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=1.9e-95 Score=775.21 Aligned_cols=467 Identities=24% Similarity=0.371 Sum_probs=363.0
Q ss_pred EEEEEEEEEEEecCCCeeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCCC-----CceeeeccccCCCCCCCCCCCC-C
Q 009283 27 RFFNWNVTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDE-----PFLISWNGVQQRRNSWQDGVYG-T 100 (538)
Q Consensus 27 ~~~~l~~~~~~~~~~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~~-----~~siH~HG~~~~~~~~~DG~~~-t 100 (538)
.+|+|++++..+.+||+.+.+|+|||++|||+||+++||+|+|+|+|+|++ +++|||||++++.++++||+++ |
T Consensus 5 ~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 84 (495)
T 3t6v_A 5 PVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFIT 84 (495)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 379999999999999999999999999999999999999999999999985 7999999999998899999999 9
Q ss_pred CCCCCCCCeEEEEEEecCCccceeeecCchhhhhcceeeEEEEecCCCC-CCCCCCCCCceEEEEeeecccChhhHHHHh
Q 009283 101 NCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASRPLI-PVPFDPPAGDFTILAGDWYKKNHTDLKAIL 179 (538)
Q Consensus 101 q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~ 179 (538)
||+|+||++|+|+|++++++||||||||.+.|+.+||+|+|||+++++. ..+|+..++|++|+++||+++....+
T Consensus 85 q~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~---- 160 (495)
T 3t6v_A 85 QCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM---- 160 (495)
T ss_dssp BCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS----
T ss_pred cCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh----
Confidence 9999999999999999778999999999999999999999999987542 12354445678999999999865432
Q ss_pred ccCCCCCCCCeEEEcCCCC--------CCceEEEecCCEEEEEEEecCCCceEEEEEeCCeeEEEEEcCeecccceecEE
Q 009283 180 DSGSDLPFPDGLVINGRGS--------NANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSL 251 (538)
Q Consensus 180 ~~~~~~~~~~~~liNG~~~--------~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~~~v 251 (538)
.+.....+|+++|||++. ..+.++|++|++|||||||+|..+.+.|+|+||+|+||++||.+++|+.++++
T Consensus 161 -~~~~p~~~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l 239 (495)
T 3t6v_A 161 -GAGGAITADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEI 239 (495)
T ss_dssp -CSSSCCCCSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBE
T ss_pred -ccCCCCCCcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEEeeeE
Confidence 122234789999999863 24789999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCeEEEEEEeCCCCcceEEEEEeeccCC---ccceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhcccCCC
Q 009283 252 DIHLGQSYSVLVRADQPPQGYYIVISTRFTSQ---VLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTA 328 (538)
Q Consensus 252 ~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~---~~~~~ail~y~~~~~~~~~~~p~~P~~~~~~~~~~~~~~~~~l~~ 328 (538)
.|+|||||||+|++++++|+|||++....... .....|+|+|.++....+ ....+..... .+. +..|.+
T Consensus 240 ~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p--~~~~~~~~~~-~~~-----~~~L~p 311 (495)
T 3t6v_A 240 QIFAAQRYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADP--VTVASTVHTK-CLI-----ETDLHP 311 (495)
T ss_dssp EECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCC--CCCCCSSCSS-BCC-----GGGCCB
T ss_pred EEcCceEEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCC--CCCCCCCCcc-ccc-----cccccc
Confidence 99999999999999987899999997643221 123579999987642111 1111100000 000 112222
Q ss_pred CCCCCCCCCCCCccccccceEEEEecccCCCCCeEeEEECCeeecCCCCchhhhcccCCCCccccCCCCCCCCCCCccee
Q 009283 329 SGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQ 408 (538)
Q Consensus 329 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~P~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~ 408 (538)
....+.|... .. ...++++.+.... ++ ..|+|||++|..++.|+|++.+. |.+... .....
T Consensus 312 ~~~~~~p~~~-~~--~~~d~~~~l~~~~---~~-~~w~iNg~s~~~~~~P~L~~~~~---g~~~~~---------~~~~~ 372 (495)
T 3t6v_A 312 LSRNGVPGNP-HQ--GGADCNLNLSLGF---AC-GNFVINGVSFTPPTVPVLLQICS---GANTAA---------DLLPS 372 (495)
T ss_dssp SSCCCCSSCS-ST--TCSSEEEECCEEE---ET-TEEEETTBCCCCCSSCHHHHHHT---TCCSST---------TSSST
T ss_pred cccccCCCcc-CC--CCCcEEEEEEEEe---cC-cEEEEcCEecCCCCCcchhhhhc---CCcCcc---------cccCC
Confidence 2211111100 00 1234455443311 12 27999999999999998876532 222110 01112
Q ss_pred eEEEEccCCcEEEEEEE-cCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCC-CCEEEEEEEccC
Q 009283 409 TSVMAADFRGFAEVVFE-NPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYP-KSWTAVYVPLDN 486 (538)
Q Consensus 409 ~~~~~~~~g~~v~~~l~-N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~-~g~~~irf~adn 486 (538)
..++.++.|++|||+|+ |...+.||||||||+|+||++++. ..+|+.+|.+|||+.|++ ++|++|||++||
T Consensus 373 ~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh~F~vl~~~g~-------~~~n~~~P~~rDtv~v~~~g~~~~irf~adn 445 (495)
T 3t6v_A 373 GSVISLPSNSTIEIALPAGAAGGPHPFHLHGHDFAVSESASN-------STSNYDDPIWRDVVSIGGVGDNVTIRFCTDN 445 (495)
T ss_dssp TSEEEECTTCEEEEEEECCSSSCCCEEEETTCCEEEEECTTC-------CCCCSSSCCEESEEECCSTTCEEEEEEECCS
T ss_pred cceEEecCCCEEEEEEccCCCCCCcceeecCCcEEEEecCCC-------CCcccCCCCCccEEEcCCCCcEEEEEEEcCC
Confidence 45788999999999998 677789999999999999987532 347889999999999997 899999999999
Q ss_pred cceeeeeecchhhhhcceEEEEEEecCCCcCCccCCCCCch-hcccccc
Q 009283 487 VGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNA-LLCGRAV 534 (538)
Q Consensus 487 pG~w~~HCHil~H~d~GMm~~~~V~~p~~~~~~~~~~p~~~-~~c~~~~ 534 (538)
||.|+|||||++|++.|||++|. +.|+++ .+..++|++. ..|..|.
T Consensus 446 PG~W~~HCHi~~H~~~Gm~~~~~-e~~~~~-~~~~~~p~~~~~~C~~~~ 492 (495)
T 3t6v_A 446 PGPWFLHCHIDWHLDAGFAIVFA-EDIPNT-ASANPVPEAWSNLCPSYD 492 (495)
T ss_dssp CEEEEEEESCHHHHHTTCEEEEE-ETHHHH-HHHCCCCHHHHHHHHHHH
T ss_pred CeeEEEEecchhHhhcCCeEEEE-EChhHh-ccccCCCHHHHHHhhHhh
Confidence 99999999999999999999994 556543 2334577764 5897653
No 6
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=4.8e-95 Score=771.98 Aligned_cols=465 Identities=23% Similarity=0.396 Sum_probs=363.1
Q ss_pred EEEEEEEEEEEecCCCeeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCCC-----CceeeeccccCCCCCCCCCCCC-C
Q 009283 27 RFFNWNVTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDE-----PFLISWNGVQQRRNSWQDGVYG-T 100 (538)
Q Consensus 27 ~~~~l~~~~~~~~~~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~~-----~~siH~HG~~~~~~~~~DG~~~-t 100 (538)
.+|+|++++..+.+||+.+.+|+|||++|||+||+++||+|+|+|+|+|++ +++|||||++++.++++||+++ |
T Consensus 4 ~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 83 (499)
T 3pxl_A 4 PVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFIN 83 (499)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred ceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 479999999999999999999999999999999999999999999999985 7999999999998899999999 9
Q ss_pred CCCCCCCCeEEEEEEecCCccceeeecCchhhhhcceeeEEEEecCCCC-CCCCCCCCCceEEEEeeecccChhhHHHHh
Q 009283 101 NCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASRPLI-PVPFDPPAGDFTILAGDWYKKNHTDLKAIL 179 (538)
Q Consensus 101 q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~ 179 (538)
||+|+||++|+|+|++++++||||||||.+.|+.+||+|+|||+++.+. ..+|+..++|++|+++||+++....
T Consensus 84 q~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~----- 158 (499)
T 3pxl_A 84 QCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL----- 158 (499)
T ss_dssp BCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT-----
T ss_pred cCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc-----
Confidence 9999999999999999778999999999999999999999999986542 1235444567899999999976532
Q ss_pred ccCCCCCCCCeEEEcCCCC-------CCceEEEecCCEEEEEEEecCCCceEEEEEeCCeeEEEEEcCeecccceecEEE
Q 009283 180 DSGSDLPFPDGLVINGRGS-------NANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLD 252 (538)
Q Consensus 180 ~~~~~~~~~~~~liNG~~~-------~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~~~v~ 252 (538)
.+.....+++++|||++. ..+.++|++|++|||||||+|..+.+.|+|+||+|+||++||.+++|+.++++.
T Consensus 159 -~~~~p~~~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~ 237 (499)
T 3pxl_A 159 -GPRFPGGADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQ 237 (499)
T ss_dssp -SCSSCSSCSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESBEE
T ss_pred -ccCCCCCCcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceEeeeEE
Confidence 122334789999999964 257999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCeEEEEEEeCCCCcceEEEEEeeccCC---ccceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhcccCCCC
Q 009283 253 IHLGQSYSVLVRADQPPQGYYIVISTRFTSQ---VLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTAS 329 (538)
Q Consensus 253 l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~---~~~~~ail~y~~~~~~~~~~~p~~P~~~~~~~~~~~~~~~~~l~~~ 329 (538)
|+|||||||+|++++++|+|||++....... .....|+|+|.++....+.. +..+ ... .+. +.+|.+.
T Consensus 238 i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~-~~~~--~~~-~~~-----~~~L~p~ 308 (499)
T 3pxl_A 238 IFAAQRYSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTT-NQTT--SVK-PLN-----EVDLHPL 308 (499)
T ss_dssp ECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCC-CCCC--CSS-BCC-----GGGCCBS
T ss_pred ECCCcEEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCC-CCCC--CCc-ccc-----ccccccc
Confidence 9999999999999987899999997643221 12357999998764211110 0000 000 000 1122222
Q ss_pred CCCCCCCCCCCccccccceEEEEecccCCCCCeEeEEECCeeecCCCCchhhhcccCCCCccccCCCCCCCCCCCcceee
Q 009283 330 GPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQT 409 (538)
Q Consensus 330 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~P~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~~ 409 (538)
...+.|.... . ...++++.+.... ++ ..|+|||++|..|+.|+|++.+. |..... ......
T Consensus 309 ~~~~~p~~~~-~--~~~d~~~~l~~~~---~~-~~w~iNg~s~~~~~~P~L~~~~~---g~~~~~---------~~~~~~ 369 (499)
T 3pxl_A 309 VSTPVPGAPS-S--GGVDKAINMAFNF---NG-SNFFINGASFVPPTVPVLLQILS---GAQTAQ---------DLLPSG 369 (499)
T ss_dssp SCCCCSSCSS-T--TCSSEEEECCEEE---CS-SCEEETTBCCCCCSSCHHHHHHT---TCCSTT---------TSSSTT
T ss_pred ccccCCCccc-C--CCCcEEEEEEEEe---cC-cEEEEcCEecCCCCCchhhhhhc---CCcccc---------ccCCCc
Confidence 2111111000 0 1234555544321 12 37999999999999998876532 221110 011124
Q ss_pred EEEEccCCcEEEEEEE---cCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCC---CCEEEEEEE
Q 009283 410 SVMAADFRGFAEVVFE---NPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYP---KSWTAVYVP 483 (538)
Q Consensus 410 ~~~~~~~g~~v~~~l~---N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~---~g~~~irf~ 483 (538)
.++.++.|++|||+|+ |...+.||||||||+|+||+.++. ..+|+.+|.+|||+.|++ ++|++|||+
T Consensus 370 ~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~~~g~-------~~~n~~~P~~rDtv~v~~~~pg~~~~irf~ 442 (499)
T 3pxl_A 370 SVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAGS-------TVYNYDNPIFRDVVSTGTPAAGDNVTIRFD 442 (499)
T ss_dssp SEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTTC-------CCCCSSSCCEESEEECCCGGGTCEEEEEEE
T ss_pred eeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEeccCC-------cccccCCCCccceEEcCCcCCCcEEEEEEE
Confidence 5788999999999999 566778999999999999987532 347889999999999997 999999999
Q ss_pred ccCcceeeeeecchhhhhcceEEEEEEecCCCcCCccCCCCCc-hhcccccc
Q 009283 484 LDNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSN-ALLCGRAV 534 (538)
Q Consensus 484 adnpG~w~~HCHil~H~d~GMm~~~~V~~p~~~~~~~~~~p~~-~~~c~~~~ 534 (538)
+||||.|+|||||++|++.|||++| ++.|+++ .+..++|++ ...|..|.
T Consensus 443 adnPG~W~~HCHi~~H~~~Gm~~~~-~e~~~~~-~~~~~~p~~~~~~C~~~~ 492 (499)
T 3pxl_A 443 TNNPGPWFLHCHIDFHLEGGFAVVM-AEDTPDV-KAVNPVPQAWSDLCPTYD 492 (499)
T ss_dssp CCSCEEEEEEESSHHHHHTTCEEEE-EESGGGH-HHHSCCCHHHHTHHHHHH
T ss_pred cCCCceEEEEeCChhHhhCCCcEEE-EEChhHh-ccccCCCHHHHHhhhHhh
Confidence 9999999999999999999999998 4666554 233456776 46897764
No 7
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=1.3e-93 Score=774.79 Aligned_cols=476 Identities=24% Similarity=0.371 Sum_probs=368.3
Q ss_pred CCCeEEEEEEEEEEE--ecCCCee-eEEEEEcCcCcCceEEEecCCEEEEEEEeCC-CCCceeeeccccCCCCCCCCCCC
Q 009283 23 ESPYRFFNWNVTYGD--IYPLGVK-QQGILINGQFPGPSIEAVTNDNLIISVFNAL-DEPFLISWNGVQQRRNSWQDGVY 98 (538)
Q Consensus 23 ~~~~~~~~l~~~~~~--~~~~G~~-~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l-~~~~siH~HG~~~~~~~~~DG~~ 98 (538)
.+.+++|+|++++.. +.+||+. +.+|+|||++|||+||+++||+|+|+|+|+| +++++|||||+++..++++||++
T Consensus 30 ~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~ 109 (559)
T 2q9o_A 30 TGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGAN 109 (559)
T ss_dssp CCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCB
T ss_pred CCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCC
Confidence 456799999999999 8899999 9999999999999999999999999999999 58999999999998889999999
Q ss_pred C-CCCCCCC-CCeEEEEEEecCCccceeeecCchhhhhcceeeEEEEecCCCCCCCCCCCCCce-EEEEeeecccChhhH
Q 009283 99 G-TNCPIPP-GKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASRPLIPVPFDPPAGDF-TILAGDWYKKNHTDL 175 (538)
Q Consensus 99 ~-tq~~i~p-G~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~-~l~l~d~~~~~~~~~ 175 (538)
+ |||+|.| |++|+|+|++. ++||||||||.+.|+.+||+|+|||++++. .+| |.|. +|+++||+++..+++
T Consensus 110 ~~tq~~I~P~G~~~~Y~f~~~-q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~--~~~---d~d~~~l~l~Dw~~~~~~~~ 183 (559)
T 2q9o_A 110 GVTECPIPPKGGQRTYRWRAR-QYGTSWYHSHFSAQYGNGVVGTIQINGPAS--LPY---DIDLGVFPITDYYYRAADDL 183 (559)
T ss_dssp TTTBCCBCTTTEEEEEEEECC-SCEEEEEEECSTTGGGGTCEEEEEEECCCS--SCC---SEEEEEEEEEEECSSCHHHH
T ss_pred ccccCccCCCCCeEEEEEECC-CCEEEEEEEcccchhcCCceEEEEecCCCc--CCC---cccceEEEEeccccCCHHHH
Confidence 9 9999999 99999999994 899999999999999999999999998763 334 7777 999999999987766
Q ss_pred HHHhccCCCCCCCCeEEEcCCCCC-------CceEEEecCCEEEEEEEecCCCceEEEEEeCCeeEEEEEcCeeccccee
Q 009283 176 KAILDSGSDLPFPDGLVINGRGSN-------ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTY 248 (538)
Q Consensus 176 ~~~~~~~~~~~~~~~~liNG~~~~-------~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~ 248 (538)
..... ....+.++.++|||+... .+.++|++|++|||||||+|..+.+.|+|+||+|+||++||.+++|+.+
T Consensus 184 ~~~~~-~~~~~~~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~ 262 (559)
T 2q9o_A 184 VHFTQ-NNAPPFSDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTV 262 (559)
T ss_dssp HHHHT-TSCCCCBSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEE
T ss_pred hhhhh-cCCCCccceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCcccCceEe
Confidence 43222 223467899999999843 4689999999999999999999999999999999999999999999999
Q ss_pred cEEEEcCCCeEEEEEEeCCCCcceEEEEEe--ec---cCCccceEEEEEecCCCCCCCCCCCCCCC-ccccchhhhhhhh
Q 009283 249 DSLDIHLGQSYSVLVRADQPPQGYYIVIST--RF---TSQVLSATSVLHYSNSAGSVSGPPPGGPT-TQIDWSLEQARSL 322 (538)
Q Consensus 249 ~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~--~~---~~~~~~~~ail~y~~~~~~~~~~~p~~P~-~~~~~~~~~~~~~ 322 (538)
+++.|+|||||||+|++++.+|+|||++.. .. ........++|+|.++... .|..+. ...+ . .+...
T Consensus 263 ~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~~----~P~~~~~~~~~--~-~~~~~ 335 (559)
T 2q9o_A 263 DSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGG----LPTDEGTPPVD--H-QCLDT 335 (559)
T ss_dssp SCEEECTTCEEEEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCCS----CCCCCCCCCCC--C-TTCCC
T ss_pred CeEEEccEEEEEEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCCC----CCCCCCCcCCC--c-ccccc
Confidence 999999999999999999778999999976 21 1223456899999876421 111110 0000 0 00000
Q ss_pred cccCCCCCCCCCCCCCCCccccccceEEEEecccCCCCCeEeEEECCeeecC-CCCchhhhcccCCCCccccCCCCCCCC
Q 009283 323 RRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIP-ADTPLKLADYFKIPGVFSVGSIPDNPT 401 (538)
Q Consensus 323 ~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~-p~~P~l~~~~~~~~g~~~~~~~~~~p~ 401 (538)
..+.+..+.+.|...+. ...++++.+.... ..++...|+|||++|.. +..|+|.+.+. |. ...|
T Consensus 336 -~~l~p~~~~~~p~~~~~---~~~~~~~~~~~~~-~~~~~~~~~iNg~s~~~~~~~P~L~~~~~---g~------~~~~- 400 (559)
T 2q9o_A 336 -LDVRPVVPRSVPVNSFV---KRPDNTLPVALDL-TGTPLFVWKVNGSDINVDWGKPIIDYILT---GN------TSYP- 400 (559)
T ss_dssp -SCCCBSSCCBCCCTTCC---CCGGGEEEEEEEC-SSSSSCEEEETTBCCCCCTTSCHHHHHHH---TC------CCCC-
T ss_pred -cccccCCCCCCCCcccc---cceeEEEEEEeec-CCCceEEEEECCEecccCCCCCcHhHhhc---CC------ccCC-
Confidence 11222211111211110 1122344443311 12345689999999974 57887765432 11 0011
Q ss_pred CCCcceeeEEEEccC-CcEEEEEEEcCC----CCCCCccccCCCceEEeecC---------CCCCCC-CCCCcCCCCCCc
Q 009283 402 GGGAYLQTSVMAADF-RGFAEVVFENPE----DTLQSWHIDGHNFFAVGMDG---------GEWTPA-SRLTYNLRDTIS 466 (538)
Q Consensus 402 ~~~~~~~~~~~~~~~-g~~v~~~l~N~~----~~~HP~HlHG~~F~Vl~~~~---------g~~~~~-~~~~~~~~~p~~ 466 (538)
.+..++.++. ++|++|+++|.+ .+.||||||||+||||++++ |.|++. ....+++.+|.|
T Consensus 401 -----~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~ 475 (559)
T 2q9o_A 401 -----VSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPR 475 (559)
T ss_dssp -----GGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCE
T ss_pred -----CCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEEecccccccccccccccCccccccccccCCCCc
Confidence 1345566654 688999999976 68999999999999999987 666542 124578899999
Q ss_pred eeeEEeCCCCEEEEEEEccCcceeeeeecchhhhhcceEEEEEEecCCCcCCccCCC--CC-chhcccccc
Q 009283 467 RCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPI--PS-NALLCGRAV 534 (538)
Q Consensus 467 rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~p~~~~~~~~~~--p~-~~~~c~~~~ 534 (538)
||||.|++++|++|||++||||.|||||||++|++.|||++|.|. ++++ .+..++ |+ ..+.|..|.
T Consensus 476 RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~-~~~~-~~~~~~~~p~~~~~~C~~~~ 544 (559)
T 2q9o_A 476 RDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLER-PADL-RQRISQEDEDDFNRVCDEWR 544 (559)
T ss_dssp ESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEEC-HHHH-GGGCCHHHHHHHHHHHHHHH
T ss_pred cceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEEC-cchh-hhccccCCchhhhhhccccc
Confidence 999999999999999999999999999999999999999999875 3332 233444 66 468998764
No 8
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=1.3e-93 Score=766.45 Aligned_cols=463 Identities=26% Similarity=0.428 Sum_probs=361.4
Q ss_pred EEEEEEEEEEecCCCeeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCC-----CCceeeeccccCCCCCCCCCCCC-CC
Q 009283 28 FFNWNVTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALD-----EPFLISWNGVQQRRNSWQDGVYG-TN 101 (538)
Q Consensus 28 ~~~l~~~~~~~~~~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~-----~~~siH~HG~~~~~~~~~DG~~~-tq 101 (538)
+|+|++++..+.+||+.+++|+|||++ ||+||+++||+|+|+|+|+|+ ++++|||||+++..++++||+++ ||
T Consensus 6 ~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vtq 84 (503)
T 1hfu_A 6 VDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQ 84 (503)
T ss_dssp EEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred eEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCccccc
Confidence 699999999999999999999999999 999999999999999999999 99999999999988899999999 99
Q ss_pred CCCCCCCeEEEEEEecCCccceeeecCchhhhhcceeeEEEEecCCCC-CCCCCCCCCceEEEEeeecccChhhHHHHhc
Q 009283 102 CPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASRPLI-PVPFDPPAGDFTILAGDWYKKNHTDLKAILD 180 (538)
Q Consensus 102 ~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~ 180 (538)
|+|.||++|+|+|++.+++||||||||.+.|+.+||+|+|||+++++. +.+|+..++|++|+++||+++..+++..
T Consensus 85 ~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~~--- 161 (503)
T 1hfu_A 85 CPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQG--- 161 (503)
T ss_dssp CCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC----
T ss_pred CCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhcC---
Confidence 999999999999997678999999999999999999999999987532 2345444479999999999987665421
Q ss_pred cCCCCCCCCeEEEcCCCC-------CCceEEEecCCEEEEEEEecCCCceEEEEEeCCeeEEEEEcCeecccceecEEEE
Q 009283 181 SGSDLPFPDGLVINGRGS-------NANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDI 253 (538)
Q Consensus 181 ~~~~~~~~~~~liNG~~~-------~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~~~v~l 253 (538)
.+.++.++|||+.. ..+.++|++|++|||||||+|..+.+.|+|+||+|+||++||.+++|+.++++.|
T Consensus 162 ----~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l 237 (503)
T 1hfu_A 162 ----AAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQI 237 (503)
T ss_dssp ------CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEE
T ss_pred ----CCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCccccccccCeEEE
Confidence 14689999999983 1289999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEEEEeCCCCcceEEEEEeeccCC-------ccceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhcccC
Q 009283 254 HLGQSYSVLVRADQPPQGYYIVISTRFTSQ-------VLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNL 326 (538)
Q Consensus 254 ~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~-------~~~~~ail~y~~~~~~~~~~~p~~P~~~~~~~~~~~~~~~~~l 326 (538)
+|||||||+|++++++|+|+|++....... .....++|+|.++....+.. +..|.. . .+.. ..|
T Consensus 238 ~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~-~~~~~~-~--~l~~-----~~l 308 (503)
T 1hfu_A 238 FTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTT-SANPNP-A--QLNE-----ADL 308 (503)
T ss_dssp CTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCC-CCCSSC-C--BCCG-----GGC
T ss_pred cccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCC-CCCCcc-C--CCcc-----ccc
Confidence 999999999999977899999997642211 11246999998765221110 001100 0 1110 112
Q ss_pred CCCCCCCCCCCCCCccccccceEEEEecccCCCCCeEeEEECCeeecCCCCchhhhcccCCCCccccCCCCCCCCCCCcc
Q 009283 327 TASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAY 406 (538)
Q Consensus 327 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~P~l~~~~~~~~g~~~~~~~~~~p~~~~~~ 406 (538)
.+....+.|..... ...++++.+... .++. .|+|||++|..+..|+|.+.+. +.+... ..+
T Consensus 309 ~p~~~~~~p~~~~~---~~~~~~~~l~~~---~~~~-~~~iNg~~~~~~~~P~l~~~~~---g~~~~~---------~~~ 369 (503)
T 1hfu_A 309 HALIDPAAPGIPTP---GAADVNLRFQLG---FSGG-RFTINGTAYESPSVPTLLQIMS---GAQSAN---------DLL 369 (503)
T ss_dssp BBSSSCSCSSCSST---TCSSEEEECCEE---EETT-EEEETTBCCCCCSSCHHHHHHT---TCCSGG---------GSS
T ss_pred cccCccCCCCcccC---CcceEEEEEEee---ccCc-eEEECCCccCCCCCcchhhhhc---CCcccc---------cCC
Confidence 22211111111000 022344444321 1122 7999999999888898876532 221100 112
Q ss_pred eeeEEEEccCCcEEEEEEEc-CCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEe-CCCCEEEEEEEc
Q 009283 407 LQTSVMAADFRGFAEVVFEN-PEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQV-YPKSWTAVYVPL 484 (538)
Q Consensus 407 ~~~~~~~~~~g~~v~~~l~N-~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~v-p~~g~~~irf~a 484 (538)
.+..++.++.|++|||+++| .+.+.||||||||+||||+++++. .+++.+|.|||||.| ++++|++|||++
T Consensus 370 ~~~~~~~v~~g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V~ppg~~v~irf~a 442 (503)
T 1hfu_A 370 PAGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSS-------TYNFVNPVKRDVVSLGVTGDEVTIRFVT 442 (503)
T ss_dssp STTSEEEECSSCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCC-------CCCCSSBCEESEEECCSTTCEEEEEEEC
T ss_pred CCceEEEccCCCEEEEEEECCCCCCCCCEEEecceEEEEecCCCC-------ccccCCCCeeeeEEecCCCceEEEEEEc
Confidence 24567889999999999994 557899999999999999997653 257788999999999 999999999999
Q ss_pred cCcceeeeeecchhhhhcceEEEEEEecCCCcCCccCCCCC-chhccccccC
Q 009283 485 DNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPS-NALLCGRAVG 535 (538)
Q Consensus 485 dnpG~w~~HCHil~H~d~GMm~~~~V~~p~~~~~~~~~~p~-~~~~c~~~~~ 535 (538)
||||.|+|||||++|++.|||+.|.|... ++ .+..++|+ +.+.|..|..
T Consensus 443 dnPG~W~~HCHil~H~~~GM~~~~~v~~~-~~-~~~~~~p~~~~~~C~~~~~ 492 (503)
T 1hfu_A 443 DNPGPWFFHCHIEFHLMNGLAIVFAEDMA-NT-VDANNPPVEWAQLCEIYDD 492 (503)
T ss_dssp CSCEEEEEEESSHHHHHTTCEEEEEECHH-HH-HHHCCCCHHHHHHHHHHHT
T ss_pred CCCeeeeEecCchhHhhCCCeEEEEECch-hh-hhccCCChHHhhhccchhh
Confidence 99999999999999999999999988543 22 23455675 5789988764
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=3.5e-87 Score=706.10 Aligned_cols=400 Identities=19% Similarity=0.253 Sum_probs=324.6
Q ss_pred cCCCeEEEEEEEEEEEecCCCeeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCCCC
Q 009283 22 GESPYRFFNWNVTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTN 101 (538)
Q Consensus 22 ~~~~~~~~~l~~~~~~~~~~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~tq 101 (538)
+.+++++|+|+++++.++++|.++.+|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++. +++||++
T Consensus 12 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~~--- 86 (439)
T 2xu9_A 12 SQGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPIS--PKVDDPF--- 86 (439)
T ss_dssp CBTTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCC--TTTSCTT---
T ss_pred cCCCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCC--ccccCCc---
Confidence 45677899999999999999999999999999999999999999999999999999999999999875 4899987
Q ss_pred CCCCCCCeEEEEEEec-CCccceeeecCc----hhhhhcceeeEEEEecCCCCCCCCCCCCCceEEEEeeecccChhhH-
Q 009283 102 CPIPPGKNFTYVLQVK-DQIGSYFYFPSL----AFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDL- 175 (538)
Q Consensus 102 ~~i~pG~~~~Y~f~~~-~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~- 175 (538)
+.|.||++|+|+|+++ +++||||||||. +.|+.+||+|+|||+++.+..... ..++|++|+++||+++.....
T Consensus 87 ~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~-~~~~e~~l~l~D~~~~~~~~~~ 165 (439)
T 2xu9_A 87 LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAIPEL-REAEEHLLVLKDLALQGGRPAP 165 (439)
T ss_dssp CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGSHHH-HTSEEEEEEEEEECEETTEECC
T ss_pred ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccCccC-CCCCcEEEEEEeeeeCCCCcCC
Confidence 5699999999999986 479999999996 589999999999999865321111 347899999999998753100
Q ss_pred ---HHHhccCCCCCCCCeEEEcCCCCCCceEEEecCCEEEEEEEecCCCceEEEEEeCCeeEEEEEcCeec-ccceecEE
Q 009283 176 ---KAILDSGSDLPFPDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHT-LQNTYDSL 251 (538)
Q Consensus 176 ---~~~~~~~~~~~~~~~~liNG~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~-~p~~~~~v 251 (538)
...+ ....++.++|||+. .|.++|++| +|||||||+|+.+.+.|+|+||+|+||+.||.++ +|+.++++
T Consensus 166 ~~~~~~~----~g~~~~~~~iNG~~--~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~~p~~~~~l 238 (439)
T 2xu9_A 166 HTPMDWM----NGKEGDLVLVNGAL--RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSEL 238 (439)
T ss_dssp CCHHHHH----HCCCCSEEEETTEE--SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEEESCE
T ss_pred CCccccc----cCCCCCEEEECCcc--CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCCCCceEeceE
Confidence 0000 12357899999999 899999999 9999999999999999999999999999999997 79999999
Q ss_pred EEcCCCeEEEEEEeCCCCcceEEEEEeeccC------------------CccceEEEEEecCCCCCCCCCCCCCCCcccc
Q 009283 252 DIHLGQSYSVLVRADQPPQGYYIVISTRFTS------------------QVLSATSVLHYSNSAGSVSGPPPGGPTTQID 313 (538)
Q Consensus 252 ~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~------------------~~~~~~ail~y~~~~~~~~~~~p~~P~~~~~ 313 (538)
.|+|||||||+|++++ +|+|+|++...... ......++++|.+... ..++|..
T Consensus 239 ~l~pgeR~dv~v~~~~-~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~p~~------ 309 (439)
T 2xu9_A 239 LLAPGERAEVLVRLRK-EGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPK--PLPLPKA------ 309 (439)
T ss_dssp EECTTCEEEEEEECCS-SEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCC--CCCCCSC------
T ss_pred EECCceeEEEEEEcCC-CceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCc--cccCccc------
Confidence 9999999999999995 89999998643211 1124678888876541 1112210
Q ss_pred chhhhhhhhcccCCCCCCCCCCCCCCCccccccceEEEEecccCCCCCeEeEEECCeeecCCCCchhhhcccCCCCcccc
Q 009283 314 WSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSV 393 (538)
Q Consensus 314 ~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~P~l~~~~~~~~g~~~~ 393 (538)
+.+....+.+ ..++++.+.... .+ ..|+|||++|..+..+
T Consensus 310 ------------l~~~~~l~~~---------~~~r~~~l~~~~---~g-~~~~iNg~~~~~~~~~--------------- 349 (439)
T 2xu9_A 310 ------------LSPFPTLPAP---------VVTRRLVLTEDM---MA-ARFFINGQVFDHRRVD--------------- 349 (439)
T ss_dssp ------------CCCCCCCCCC---------SEEEEEEEEEEG---GG-TEEEETTBCCCTTCCC---------------
T ss_pred ------------CCCcccCCCC---------CcceEEEEEeec---cC-ceEeECCEECCCCCCc---------------
Confidence 0000001111 123666665422 11 3699999998532211
Q ss_pred CCCCCCCCCCCcceeeEEEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeC
Q 009283 394 GSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVY 473 (538)
Q Consensus 394 ~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp 473 (538)
+.++.|++|+|+|+|.+.+.||||||||+||||+++++.+ .+|.|||||.|+
T Consensus 350 ------------------~~~~~g~~~~~~~~N~~~~~HP~HLHG~~F~Vl~~~g~~~----------~~p~~rDTv~v~ 401 (439)
T 2xu9_A 350 ------------------LKGQAQTVEVWEVENQGDMDHPFHLHVHPFQVLSVGGRPF----------PYRAWKDVVNLK 401 (439)
T ss_dssp ------------------EEECTTCEEEEEEEECSSSCEEEEESSCCBEEEEETTEEC----------SSCCCBSEEEEC
T ss_pred ------------------eecCCCCEEEEEEEcCCCCCCCceeCCCcEEEEeeCCCCC----------CCCCCeEEEEeC
Confidence 3567899999999999999999999999999999976533 368999999999
Q ss_pred CCCEEEEEEEccCcceeeeeecchhhhhcceEEEEEEe
Q 009283 474 PKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVY 511 (538)
Q Consensus 474 ~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 511 (538)
++++++|||++||||.|||||||++|+|.|||+.|+|+
T Consensus 402 p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 402 AGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp TTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred CCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 99999999999999999999999999999999999984
No 10
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=1.9e-86 Score=701.36 Aligned_cols=403 Identities=18% Similarity=0.159 Sum_probs=321.9
Q ss_pred CeEEEEEEEEEEEecC-CCeeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCCCCCC
Q 009283 25 PYRFFNWNVTYGDIYP-LGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCP 103 (538)
Q Consensus 25 ~~~~~~l~~~~~~~~~-~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~tq~~ 103 (538)
.+++|+|++++..+++ +|..+.+|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++... +||+| ||+
T Consensus 17 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~--~~~ 92 (451)
T 2uxt_A 17 RGQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP--ARM 92 (451)
T ss_dssp SSCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG--GGC
T ss_pred CceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC--cCc
Confidence 3578999999999998 799999999999999999999999999999999999999999999998764 99998 899
Q ss_pred CCCCCeEEEEEEecCCccceeeecCc----hhhhhcceeeEEEEecCCCCCCCCCC--CCCceEEEEeeecccChhhHHH
Q 009283 104 IPPGKNFTYVLQVKDQIGSYFYFPSL----AFHKAAGGYGGIKIASRPLIPVPFDP--PAGDFTILAGDWYKKNHTDLKA 177 (538)
Q Consensus 104 i~pG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~l~d~~~~~~~~~~~ 177 (538)
|.||++|+|+|++.+++||||||||. +.|+.+||+|+|||++++....+++. .++|++|+++||+++.++++..
T Consensus 93 i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~~ 172 (451)
T 2uxt_A 93 MSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEY 172 (451)
T ss_dssp BCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEEC
T ss_pred CCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCceec
Confidence 99999999999996559999999997 78999999999999997643332222 4789999999999986654321
Q ss_pred HhccCCCCCCCCeEEEcCCCCCCceEEEecCCEEEEEEEecCCCceEEEEE-eCCeeEEEEEcCeec-ccceecEEEEcC
Q 009283 178 ILDSGSDLPFPDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRI-QGHKMLLVEVEGTHT-LQNTYDSLDIHL 255 (538)
Q Consensus 178 ~~~~~~~~~~~~~~liNG~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l-~gh~~~via~DG~~~-~p~~~~~v~l~p 255 (538)
. ........++.++|||+. .|.++|++| +|||||||+|+.+.+.|+| +||+|+||++||.++ +|..++++.|+|
T Consensus 173 ~-~~~~~~~~~d~~liNG~~--~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~~P~~~~~l~l~p 248 (451)
T 2uxt_A 173 N-EPGSGGFVGDTLLVNGVQ--SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAP 248 (451)
T ss_dssp C-CCSSSCCCCSEEEETTEE--SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEEEEEEESSEEECT
T ss_pred c-cccCCCCcCCEEEECCcc--cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccCCceEeceEEECc
Confidence 1 122234578999999999 899999999 9999999999999999999 899999999999987 799999999999
Q ss_pred CCeEEEEEEeCCCCcceEEEEEeecc-----------CCccceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhcc
Q 009283 256 GQSYSVLVRADQPPQGYYIVISTRFT-----------SQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRR 324 (538)
Q Consensus 256 geR~dv~v~~~~~~g~y~i~~~~~~~-----------~~~~~~~ail~y~~~~~~~~~~~p~~P~~~~~~~~~~~~~~~~ 324 (538)
||||||+|+++ +++.|+|++..... .......++++|........ +....| .
T Consensus 249 geR~dvlv~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~-~~~~~p---------------~ 311 (451)
T 2uxt_A 249 GERREILVDMS-NGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPL-VTDSLP---------------M 311 (451)
T ss_dssp TCEEEEEEECT-TCCCEEEEC----------------CCCCSCCEEEEEEECSCCC-----CCC---------------S
T ss_pred eeEEEEEEEeC-CCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcC-ccccCc---------------c
Confidence 99999999999 57899999765321 11123457788875431110 000001 1
Q ss_pred cCCCCCCCCCCCCCCCccccccceEEEEecccCCCCCeEeEEECCeeecCCCCchhhhcccCCCCccccCCCCCCCCCCC
Q 009283 325 NLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGG 404 (538)
Q Consensus 325 ~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~P~l~~~~~~~~g~~~~~~~~~~p~~~~ 404 (538)
.|.+....+. ....++++.+. + .|+|||++|..+..
T Consensus 312 ~L~~~~~~~~--------~~~~~~~~~l~-------~--~~~iNg~~f~~~~~--------------------------- 347 (451)
T 2uxt_A 312 RLLPTEIMAG--------SPIRSRDISLG-------D--DPGINGQLWDVNRI--------------------------- 347 (451)
T ss_dssp CSSSSCCCCC--------CCSEEEEEEEC-------S--SSSBTTBCCCTTCC---------------------------
T ss_pred ccCCCCCCCC--------CCcceEEEEEe-------e--EEEECCEeCCCCCC---------------------------
Confidence 1111111110 11334566553 1 59999999853211
Q ss_pred cceeeEEEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEc
Q 009283 405 AYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPL 484 (538)
Q Consensus 405 ~~~~~~~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~a 484 (538)
.+.++.|++|+|+|+|. +.||||||||+||||++++.. +++.+|.|||||.| +++++|+|++
T Consensus 348 ------~~~~~~G~~~~~~l~N~--~~HP~HLHGh~F~Vl~~~G~~--------~~~~~p~~rDTv~v--g~~~~i~~~~ 409 (451)
T 2uxt_A 348 ------DVTAQQGTWERWTVRAD--EPQAFHIEGVMFQIRNVNGAM--------PFPEDRGWKDTVWV--DGQVELLVYF 409 (451)
T ss_dssp ------CEEEETTCEEEEEEEEE--EEEEEEETTCEEEEEEETTBC--------CCGGGSSCBSEEEE--EEEEEEEEEC
T ss_pred ------cEEcCCCCEEEEEEECC--CCcCeEECCceEEEEeeCCcC--------CCcccCCCccEEEE--CCEEEEEEEe
Confidence 13567899999999997 689999999999999997532 35567999999999 8999999999
Q ss_pred cCcce----eeeeecchhhhhcceEEEEEEecCC
Q 009283 485 DNVGM----WNIRSENWARQYLGQQFYLRVYSSA 514 (538)
Q Consensus 485 dnpG~----w~~HCHil~H~d~GMm~~~~V~~p~ 514 (538)
||||. ||||||||+|+|.|||+.|+|.+.+
T Consensus 410 dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~ 443 (451)
T 2uxt_A 410 GQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVP 443 (451)
T ss_dssp CSCCBTTBCEEEEESSHHHHHTTCEEEEEEECSC
T ss_pred CCCCCCCCceEEeCCchhHHhCCCcEEEEEccCc
Confidence 99988 9999999999999999999997543
No 11
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=3.6e-84 Score=695.23 Aligned_cols=417 Identities=14% Similarity=0.143 Sum_probs=324.6
Q ss_pred eEEEEEEEEEEE--ecCCCeeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCCCCCC
Q 009283 26 YRFFNWNVTYGD--IYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCP 103 (538)
Q Consensus 26 ~~~~~l~~~~~~--~~~~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~tq~~ 103 (538)
+++|+|++++.. +.++|..+.+|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++.. .+||++ ||+
T Consensus 36 ~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~DG~~--~~~ 111 (534)
T 3abg_A 36 IWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRA--AFDGWA--EDI 111 (534)
T ss_dssp CEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCCT--TTTTCS--SSC
T ss_pred eEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCCC--CCCCCC--CCC
Confidence 478999999765 56788889999999999999999999999999999999999999999998764 699986 899
Q ss_pred CCCCCeEEEEEEecCCccceeeecCch----hhhhcceeeEEEEecCCCCCCCCCC--CCCceEEEEeeecccChhhHHH
Q 009283 104 IPPGKNFTYVLQVKDQIGSYFYFPSLA----FHKAAGGYGGIKIASRPLIPVPFDP--PAGDFTILAGDWYKKNHTDLKA 177 (538)
Q Consensus 104 i~pG~~~~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~l~d~~~~~~~~~~~ 177 (538)
|.||++|+|+|++.+++||||||||.. .|+.+||+|+|||++++....+++. .+.|++|+++||+++.++++..
T Consensus 112 i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~~~ 191 (534)
T 3abg_A 112 TEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLVT 191 (534)
T ss_dssp BSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCBCC
T ss_pred CCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCceec
Confidence 999999999999965589999999974 5899999999999998765444432 2678999999999886554321
Q ss_pred HhccCCCCCCCCeEEEcCCCCCCceEEEecCCEEEEEEEecCCCceEEEEEeC-------CeeEEEEEcCee-cccceec
Q 009283 178 ILDSGSDLPFPDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQG-------HKMLLVEVEGTH-TLQNTYD 249 (538)
Q Consensus 178 ~~~~~~~~~~~~~~liNG~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~g-------h~~~via~DG~~-~~p~~~~ 249 (538)
.. .......+|.++|||+. .|.++|++ ++|||||||+|+.+.+.|+|++ |+|+||++||++ .+|+.++
T Consensus 192 ~~-~~~~~~~gd~~lvNG~~--~p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa~DG~~~~~P~~~~ 267 (534)
T 3abg_A 192 TN-GELNSFWGDVIHVNGQP--WPFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTS 267 (534)
T ss_dssp CT-TCSSCCCCSEEEETTEE--SCBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEEETTEEEEEEEEES
T ss_pred cC-CCCccccCceeccCCcc--CceEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEEeCCCcccCceEec
Confidence 10 11123468999999999 89999998 5899999999999999999987 999999999985 5799999
Q ss_pred EEEEcCCCeEEEEEEeCCCCc-ceEEEEEeec--c----CCccceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhh
Q 009283 250 SLDIHLGQSYSVLVRADQPPQ-GYYIVISTRF--T----SQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSL 322 (538)
Q Consensus 250 ~v~l~pgeR~dv~v~~~~~~g-~y~i~~~~~~--~----~~~~~~~ail~y~~~~~~~~~~~p~~P~~~~~~~~~~~~~~ 322 (538)
++.|+|||||||+|++++.+| +|+|++.... + .......++++|.....+. .+.+. . +
T Consensus 268 ~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~-~~~~~----~----------~ 332 (534)
T 3abg_A 268 LLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTT-QPDTS----V----------V 332 (534)
T ss_dssp CEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSS-CSCCC----C----------C
T ss_pred eEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCc-CCCCC----C----------C
Confidence 999999999999999997667 6999874310 0 1112345888887544210 00000 0 0
Q ss_pred cccCCCCCCCCCCCCCCCccccccceEEEEecccCCCCCeEeEEECCeeecCCCCchhhhcccCCCCccccCCCCCCCCC
Q 009283 323 RRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTG 402 (538)
Q Consensus 323 ~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~P~l~~~~~~~~g~~~~~~~~~~p~~ 402 (538)
+..|.+.. .+.+. ...++++.+... ...|+|||++|..+..|++
T Consensus 333 P~~L~~~~-~p~~~-------~~~~~~~~~~~~------~~~w~iNG~~f~~~~~p~l---------------------- 376 (534)
T 3abg_A 333 PANLRDVP-FPSPT-------TNTPRQFRFGRT------GPTWTINGVAFADVQNRLL---------------------- 376 (534)
T ss_dssp CCCCCCCS-CCCCC-------CCCCEEEECSCC------CSTTCCCCBTTBCTTSCCC----------------------
T ss_pred ccccccCC-CCCCc-------cccceEEEEecc------CceeEECCcccCCCCCcce----------------------
Confidence 01111111 01111 124566666431 2369999999975444432
Q ss_pred CCcceeeEEEEccCCcEEEEEEEcCCC-CCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEE
Q 009283 403 GGAYLQTSVMAADFRGFAEVVFENPED-TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVY 481 (538)
Q Consensus 403 ~~~~~~~~~~~~~~g~~v~~~l~N~~~-~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~ir 481 (538)
++++.|++|+|+|+|.+. +.||||||||+||||+++.|.+.. ..+++.+ .|||||.|+|+++++||
T Consensus 377 ---------~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~---~~~~~~~-~~rDTV~v~pg~~v~I~ 443 (534)
T 3abg_A 377 ---------ANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNAR---TVMPYES-GLKDVVWLGRRETVVVE 443 (534)
T ss_dssp ---------CEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSS---CCCSGGG-SCBSEECCCSSEEEEEE
T ss_pred ---------eeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcC---cCCcccc-CCcCeEEcCCCCEEEEE
Confidence 235789999999999874 589999999999999996553321 1234455 89999999999999999
Q ss_pred EE-ccCcceeeeeecchhhhhcceEEEEEEecCC
Q 009283 482 VP-LDNVGMWNIRSENWARQYLGQQFYLRVYSSA 514 (538)
Q Consensus 482 f~-adnpG~w~~HCHil~H~d~GMm~~~~V~~p~ 514 (538)
|+ +||||.|||||||++|+|.|||+.|.|...+
T Consensus 444 ~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 444 AHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp EECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred EEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 98 8999999999999999999999999998655
No 12
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=2.8e-83 Score=677.21 Aligned_cols=408 Identities=20% Similarity=0.212 Sum_probs=316.6
Q ss_pred ccCCCeEEEEEEEEEEEecC-CCeeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCC
Q 009283 21 RGESPYRFFNWNVTYGDIYP-LGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYG 99 (538)
Q Consensus 21 ~~~~~~~~~~l~~~~~~~~~-~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~ 99 (538)
.+.+++++|+|++++..+++ +|..+++|+|||++|||+||+++||+|+|+|+|+|+++|+|||||+++ ++++||+|
T Consensus 45 ~~~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~--~~~~DG~p- 121 (481)
T 3zx1_A 45 SKEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPV--PPDQDGSP- 121 (481)
T ss_dssp CCSTTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCC--CGGGSCCT-
T ss_pred ccCCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCccc--CCccCCCc-
Confidence 35667899999999999986 699999999999999999999999999999999999999999999987 46799997
Q ss_pred CCCCCCCCCeEEEEEEecCC-ccceeeecCc----hhhhhcceeeEEEEecCCCCCCCCCCCCCceEEEEeeecccChhh
Q 009283 100 TNCPIPPGKNFTYVLQVKDQ-IGSYFYFPSL----AFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTD 174 (538)
Q Consensus 100 tq~~i~pG~~~~Y~f~~~~~-~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~ 174 (538)
||+|.||++|+|+|+++++ +||||||||. +.|+.+||+|+|||++++.....+ +.++ |+++||+++.+++
T Consensus 122 -q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~~---~~~~-l~l~D~~~~~~g~ 196 (481)
T 3zx1_A 122 -HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHL---KEKD-LMISDLRLDENAQ 196 (481)
T ss_dssp -TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTTS---EEEE-EEEEEECCBTTSC
T ss_pred -cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccccccCC---Ccee-EEEEEEeccCCCc
Confidence 8999999999999999643 7999999995 689999999999999987543333 4455 9999999886544
Q ss_pred HHH-HhccCCCCCCCCeEEEcCCCCCCceEEEecCCEEEEEEEecCCCceEEEEEeCCeeEEEEEcCeec-ccceecEEE
Q 009283 175 LKA-ILDSGSDLPFPDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHT-LQNTYDSLD 252 (538)
Q Consensus 175 ~~~-~~~~~~~~~~~~~~liNG~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~-~p~~~~~v~ 252 (538)
+.. ..........++.++|||+. .|.++|++|+ ||||||+|+.+.+.|+|+||.|+||++||.++ +|+.++++.
T Consensus 197 ~~~~~~~~~~~g~~gd~~lvNG~~--~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DGg~~~~P~~~~~l~ 272 (481)
T 3zx1_A 197 IPNNNLNDWLNGREGEFVLINGQF--KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKTIYKEELF 272 (481)
T ss_dssp CCCCCHHHHHHCCCCSEEEETTEE--SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETTEEEEEEEEESSEE
T ss_pred cccccchhhccCCcCCEEEECCcc--CceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCCCccCCceEeCeEE
Confidence 320 00000012467899999999 8999999998 99999999999999999999999999998765 699999999
Q ss_pred EcCCCeEEEEEEeCCCCcceEEEEEeeccC-----CccceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhcccCC
Q 009283 253 IHLGQSYSVLVRADQPPQGYYIVISTRFTS-----QVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLT 327 (538)
Q Consensus 253 l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~-----~~~~~~ail~y~~~~~~~~~~~p~~P~~~~~~~~~~~~~~~~~l~ 327 (538)
|+|||||||+|+++ +++.|.|++...... .......++++.... ...++|. .|.
T Consensus 273 l~pgeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~lP~------------------~l~ 331 (481)
T 3zx1_A 273 LSPASRVEVLIDAP-KDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKK--ENVELPK------------------NLK 331 (481)
T ss_dssp ECTTCEEEEEEECS-SCEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEEC--CCCCCCS------------------CSC
T ss_pred ECCccEEEEEEEcC-CCcEEEEEEecccccCccccCCCCceeEEEEecCC--CCccCCc------------------ccc
Confidence 99999999999998 578898887432210 011223333333211 1111221 011
Q ss_pred CCCCCCCCCCCCCccccccceEEEEecccCCCC-----Ce--------EeEEECCeeecCCCCchhhhcccCCCCccccC
Q 009283 328 ASGPRPNPQGSYHYGLINTTHTIRLQNTAPTIN-----GK--------QRYAVNSVSFIPADTPLKLADYFKIPGVFSVG 394 (538)
Q Consensus 328 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----g~--------~~~~iNg~~f~~p~~P~l~~~~~~~~g~~~~~ 394 (538)
+....+. ...++++.+........ +. ..|+|||+.|.. +.|
T Consensus 332 ~~~~~~~---------~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~-~~~---------------- 385 (481)
T 3zx1_A 332 IFKPSEE---------PKEFKEIIMSEDHMQMHGMMGKSEGELKIALASMFLINRKSYDL-KRI---------------- 385 (481)
T ss_dssp CCCCCCC---------CCEEEEEEEEECCSTTTTGGGCCHHHHHHHHHTTEEETTBCCCT-TCC----------------
T ss_pred CCCCCCC---------CCcEEEEEEeccchhcccccccccccccccccceeEECCEeCCC-CCc----------------
Confidence 1111111 12356666654211000 01 249999998842 111
Q ss_pred CCCCCCCCCCcceeeEEEEccCCcEEEEEEEcCCCCCCCccccCCCceEEee--cCCCCCCCCCCCcCCCCCCceeeEEe
Q 009283 395 SIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGM--DGGEWTPASRLTYNLRDTISRCTVQV 472 (538)
Q Consensus 395 ~~~~~p~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~--~~g~~~~~~~~~~~~~~p~~rDTv~v 472 (538)
.+.++.|++|+|+|.|.+.+.||||||||.|||+++ ++... ...++.|||||.|
T Consensus 386 ----------------~~~~~~G~~v~w~l~N~~~~~Hp~HlHG~~F~vl~~~~~g~~~--------~~~~~~~kDTv~v 441 (481)
T 3zx1_A 386 ----------------DLSSKLGVVEDWIVINKSHMDHPFHIHGTQFELISSKLNGKVQ--------KAEFRALRDTINV 441 (481)
T ss_dssp ----------------CEEEETTCCEEEEEEECSSSCEEEEETTCCEEEEEEEETTEEE--------ECSSCCEESEEEE
T ss_pred ----------------eEEeCCCCEEEEEEEcCCCCceeEEEeccEEEEEEecccCCCC--------CcccCcccceEEE
Confidence 145678999999999999999999999999999998 43221 1235789999999
Q ss_pred CCCCEEEEEEEccCcceeeeeecchhhhhcceEEEEEEe
Q 009283 473 YPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVY 511 (538)
Q Consensus 473 p~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 511 (538)
+|+++++|+|+|||||.||||||+++|+|.|||..|+|.
T Consensus 442 ~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 442 RPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp CTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred CCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 999999999999999999999999999999999999996
No 13
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=2.5e-82 Score=680.81 Aligned_cols=428 Identities=13% Similarity=0.130 Sum_probs=321.1
Q ss_pred CeEEEEEEEEEEEecC--CCeeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCCC----------------------Cce
Q 009283 25 PYRFFNWNVTYGDIYP--LGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDE----------------------PFL 80 (538)
Q Consensus 25 ~~~~~~l~~~~~~~~~--~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~~----------------------~~s 80 (538)
...+|+|++++...++ ++..+++|+|||++|||+|||++||+|+|+|+|+|++ +|+
T Consensus 24 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~ts 103 (513)
T 2wsd_A 24 EKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTV 103 (513)
T ss_dssp SCEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBC
T ss_pred CceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcE
Confidence 3456999999998765 4568999999999999999999999999999999975 899
Q ss_pred eeeccccCCCCCCCCCCCC---CCCCCCCCCeE---EEEEEecCCccceeeecCch----hhhhcceeeEEEEecCCCCC
Q 009283 81 ISWNGVQQRRNSWQDGVYG---TNCPIPPGKNF---TYVLQVKDQIGSYFYFPSLA----FHKAAGGYGGIKIASRPLIP 150 (538)
Q Consensus 81 iH~HG~~~~~~~~~DG~~~---tq~~i~pG~~~---~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~ 150 (538)
|||||+++. +.+||+|+ +||+|.||++| +|+|++.+++||||||||.. .|+++||+|+|||+++.+.+
T Consensus 104 iHwHGl~~~--~~~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~ 181 (513)
T 2wsd_A 104 VHLHGGVTP--DDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKR 181 (513)
T ss_dssp EEEETCCCC--GGGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGG
T ss_pred EEcCCCcCC--CccCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEecccccc
Confidence 999999875 56999984 88999999555 99999866799999999974 58999999999999976544
Q ss_pred CCCCCCCCceEEEEeeecccChhhHHHHhc-----------cCCCCCCCCeEEEcCCCCCCceEEEecCCEEEEEEEecC
Q 009283 151 VPFDPPAGDFTILAGDWYKKNHTDLKAILD-----------SGSDLPFPDGLVINGRGSNANTFTVDQGKTYRFRISNVG 219 (538)
Q Consensus 151 ~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~-----------~~~~~~~~~~~liNG~~~~~p~~~v~~G~~~rlRliN~~ 219 (538)
.+++.+++|++|+|+||+++.++++..... .......++.++|||+. .|.++|++| +|||||||+|
T Consensus 182 ~~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~--~p~~~v~~~-~~RlRliNa~ 258 (513)
T 2wsd_A 182 LKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKV--WPYLEVEPR-KYRFRVINAS 258 (513)
T ss_dssp GCCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEE--SCEEECCSS-EEEEEEEECC
T ss_pred ccCCCCCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCcc--cceEEecCC-EEEEEEEccC
Confidence 444456889999999999886544321110 00123467999999999 899999985 8999999999
Q ss_pred CCceEEEEEeCC-eeEEEEEcCeec-ccceecEEEEcCCCeEEEEEEeCCCCcceEEEEEeecc--C-CccceEEEEEec
Q 009283 220 ISTSINFRIQGH-KMLLVEVEGTHT-LQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFT--S-QVLSATSVLHYS 294 (538)
Q Consensus 220 ~~~~~~~~l~gh-~~~via~DG~~~-~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~--~-~~~~~~ail~y~ 294 (538)
+.+.+.|+|++| +|+||++||.++ +|+.++++.|+|||||||+|++++.+|++........+ . ......++++|.
T Consensus 259 ~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~ 338 (513)
T 2wsd_A 259 NTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSAGCGGDVNPETDANIMQFR 338 (513)
T ss_dssp SSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEECCCSSSSCCTTTTTEEEEEE
T ss_pred CcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCcEEEEEecccccccCCCCCCcceEEEE
Confidence 999999999999 999999999998 79999999999999999999999767774333222111 1 112345788887
Q ss_pred CCCCCCCCCCCCCCCccccchhhhhhhhcccCCCCCCCCCCCCCCCccccccceEEEEecccCCCCCeEeEEECCeeecC
Q 009283 295 NSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIP 374 (538)
Q Consensus 295 ~~~~~~~~~~p~~P~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~ 374 (538)
.+...........|. .+ ......+. .....++++.+..... ..+...|+|||++|..
T Consensus 339 ~~~~~~~~~~~~~p~-----~l----------~~~~~~~~-------~~~~~~~~~~l~~~~~-~~g~~~~~iNg~~~~~ 395 (513)
T 2wsd_A 339 VTKPLAQKDESRKPK-----YL----------ASYPSVQH-------ERIQNIRTLKLAGTQD-EYGRPVLLLNNKRWHD 395 (513)
T ss_dssp CCSCCSSCCCCCCCS-----BC----------SCCGGGCC-------CCEEEEEEEEEEEEEC-TTSCEEEEETTBCTTS
T ss_pred eccCcccCccCCCCc-----cc----------cCCCCccc-------CCCcceEEEEEEeecC-CCCCceEeECCccCCC
Confidence 543111000000110 01 00000000 0112345666654221 2345679999998843
Q ss_pred CCCchhhhcccCCCCccccCCCCCCCCCCCcceeeEEEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCC---C
Q 009283 375 ADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGE---W 451 (538)
Q Consensus 375 p~~P~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~---~ 451 (538)
+ . .+.++.|++|+|+|+|.+.+.||||||||+||||+++++. |
T Consensus 396 ~---~-------------------------------~~~~~~g~~~~w~l~N~~~~~HP~HlHG~~F~Vl~~~~~~~~~~ 441 (513)
T 2wsd_A 396 P---V-------------------------------TETPKVGTTEIWSIINPTRGTHPIHLHLVSFRVLDRRPFDIARY 441 (513)
T ss_dssp C---C-------------------------------CBCCBTTCEEEEEEEECSSSCEEEEESSCCEEEEEEEEBCHHHH
T ss_pred c---c-------------------------------cEecCCCCEEEEEEEcCCCCCcCEeEeCceEEEEEecCcccccc
Confidence 2 0 0235679999999999988999999999999999997521 1
Q ss_pred CCCC-------CCCcCCCCCCceeeEEeCCCCEEEEEEEc-cCcceeeeeecchhhhhcceEEEEEEecCC
Q 009283 452 TPAS-------RLTYNLRDTISRCTVQVYPKSWTAVYVPL-DNVGMWNIRSENWARQYLGQQFYLRVYSSA 514 (538)
Q Consensus 452 ~~~~-------~~~~~~~~p~~rDTv~vp~~g~~~irf~a-dnpG~w~~HCHil~H~d~GMm~~~~V~~p~ 514 (538)
++.. +......++.|||||.|+|+++++|+|++ ||||.|||||||++|+|.|||+.|+|.++.
T Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~~GMm~~~~V~~~~ 512 (513)
T 2wsd_A 442 QESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHEDYDMMRPMDITDPH 512 (513)
T ss_dssp HHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCEEEEEEBCC-
T ss_pred cccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhhhcCCceeEEEeCCC
Confidence 1100 00112234569999999999999999999 899999999999999999999999997654
No 14
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=1.3e-81 Score=693.61 Aligned_cols=441 Identities=15% Similarity=0.081 Sum_probs=309.5
Q ss_pred CCeEEEEEEEEEEEecC--CCeeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCCCC-----------------------
Q 009283 24 SPYRFFNWNVTYGDIYP--LGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEP----------------------- 78 (538)
Q Consensus 24 ~~~~~~~l~~~~~~~~~--~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~~~----------------------- 78 (538)
...+.|+|++++...++ ++..+++|+|||++|||+|+|++||+|+|+|+|+|+++
T Consensus 30 ~~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~ 109 (612)
T 3gyr_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCcccccc
Confidence 34578999999988765 55778999999999999999999999999999999754
Q ss_pred ------------------ceeeeccccCCCCCCCCCCCCCCCCCCCCCeEEEEEEecCCccceeeecCc----hhhhhcc
Q 009283 79 ------------------FLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSL----AFHKAAG 136 (538)
Q Consensus 79 ------------------~siH~HG~~~~~~~~~DG~~~tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~G 136 (538)
|+|||||+++. +.+||++ ||+|.||++|+|+|++.+++||||||||. +.|+.+|
T Consensus 110 ~~~~~~~~~~~~~~~~~~ttiHwHGl~~~--~~~DGv~--q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~G 185 (612)
T 3gyr_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTG--GGNDGWA--DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAG 185 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCC--TTTSCCG--GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTTT
T ss_pred ccccccccccccccCCCCceEEcCCCccC--CcccCcc--cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhcc
Confidence 67899999874 5799987 99999999999999997668999999995 6899999
Q ss_pred eeeEEEEecCCCCCCCCCCCCCceEEEEeeecccChhhHHHHh---------c--------cCCCCCCCCeEEEcCCCCC
Q 009283 137 GYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAIL---------D--------SGSDLPFPDGLVINGRGSN 199 (538)
Q Consensus 137 l~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~---------~--------~~~~~~~~~~~liNG~~~~ 199 (538)
|+|+|||+++++...+++.+++|++|+|+||+++.+....... . .......++.++|||+.
T Consensus 186 l~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~-- 263 (612)
T 3gyr_A 186 LYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRI-- 263 (612)
T ss_dssp CEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEE--
T ss_pred ceeEEEEcCccccccCCCCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCc--
Confidence 9999999998765555667789999999999887543321100 0 00123457899999999
Q ss_pred CceEEEecCCEEEEEEEecCCCceEEEEEeCC-------eeEEEEEcCeecc-cc------eecEEEEcCCCeEEEEEEe
Q 009283 200 ANTFTVDQGKTYRFRISNVGISTSINFRIQGH-------KMLLVEVEGTHTL-QN------TYDSLDIHLGQSYSVLVRA 265 (538)
Q Consensus 200 ~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh-------~~~via~DG~~~~-p~------~~~~v~l~pgeR~dv~v~~ 265 (538)
.|.+.|++ ++|||||||+|+.+.+.|+|++| +|+|||+||.+++ |+ .+++|.|+|||||||+|++
T Consensus 264 ~p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~pGeRydVlV~~ 342 (612)
T 3gyr_A 264 WPYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDF 342 (612)
T ss_dssp SCEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEEC
T ss_pred cceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEeccceEEEEEEEC
Confidence 89999976 57999999999999999999998 4999999999884 44 4568999999999999999
Q ss_pred CCCCcceEEEEEeeccC--------CccceEEEEEecCCCC--CCCCCCCCCCCcccc---chhhhhhhhcccCCCCCCC
Q 009283 266 DQPPQGYYIVISTRFTS--------QVLSATSVLHYSNSAG--SVSGPPPGGPTTQID---WSLEQARSLRRNLTASGPR 332 (538)
Q Consensus 266 ~~~~g~y~i~~~~~~~~--------~~~~~~ail~y~~~~~--~~~~~~p~~P~~~~~---~~~~~~~~~~~~l~~~~~~ 332 (538)
++.+|.++......... .......++++..... .....+|........ .......... .+.. ..
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~--~~ 419 (612)
T 3gyr_A 343 RALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHGHRLI-VLTP--PG 419 (612)
T ss_dssp TTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCEEEEE-EEEC--TT
T ss_pred CCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCcccccccccccccccccccccccccc-cccc--cc
Confidence 97777665544332111 1122345555543321 111111110000000 0000000000 0000 00
Q ss_pred CCCCCCCCccccccceEEEEeccc----------------CCCCCeEeEEECCeeecCCCCchhhhcccCCCCccccCCC
Q 009283 333 PNPQGSYHYGLINTTHTIRLQNTA----------------PTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSI 396 (538)
Q Consensus 333 ~~p~~~~~~~~~~~~~~~~~~~~~----------------~~~~g~~~~~iNg~~f~~p~~P~l~~~~~~~~g~~~~~~~ 396 (538)
.... ........+.... ........|.+|+..|.
T Consensus 420 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~----------------------- 469 (612)
T 3gyr_A 420 TKGS-------GGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTARTFN----------------------- 469 (612)
T ss_dssp CTTT-------TTCCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEEEEECSTT-----------------------
T ss_pred cccc-------cccccccccccccccccccccccceeeeccCCCccccccccCccCC-----------------------
Confidence 0000 0000000000000 00001122223322221
Q ss_pred CCCCCCCCcceeeEEEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCC----------------CCCcC
Q 009283 397 PDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPAS----------------RLTYN 460 (538)
Q Consensus 397 ~~~p~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~----------------~~~~~ 460 (538)
....+.++.|++|+|+|+|.+.+.||||||||+||||+++++.+.... ....+
T Consensus 470 -----------~~~~~~~~~g~~~~w~i~N~~~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (612)
T 3gyr_A 470 -----------DGLGFTIGEGTHEQWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLA 538 (612)
T ss_dssp -----------SCCCEEEETTCEEEEEEEECSSSCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCC
T ss_pred -----------CCcceEeCCCCEEEEEEEcCCCCCcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCcc
Confidence 123356789999999999999999999999999999998754332110 12345
Q ss_pred CCCCCceeeEEeCCCCEEEEEEE-ccCcceeeeeecchhhhhcceEEEEEEecCCC
Q 009283 461 LRDTISRCTVQVYPKSWTAVYVP-LDNVGMWNIRSENWARQYLGQQFYLRVYSSAN 515 (538)
Q Consensus 461 ~~~p~~rDTv~vp~~g~~~irf~-adnpG~w~~HCHil~H~d~GMm~~~~V~~p~~ 515 (538)
..++.|||||.|+++++++|||+ +||||.||||||||+|||.|||+.|+|++|+.
T Consensus 539 ~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~~ 594 (612)
T 3gyr_A 539 PNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPEA 594 (612)
T ss_dssp TTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHHH
T ss_pred cccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCcc
Confidence 67789999999999999999998 69999999999999999999999999998864
No 15
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=2.5e-82 Score=668.78 Aligned_cols=389 Identities=16% Similarity=0.202 Sum_probs=304.8
Q ss_pred eEEEEEEEEEEEecCCCeeeEEEEEcCc-CcCceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCCCCCCC
Q 009283 26 YRFFNWNVTYGDIYPLGVKQQGILINGQ-FPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPI 104 (538)
Q Consensus 26 ~~~~~l~~~~~~~~~~G~~~~~~~~Ng~-~pgP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~tq~~i 104 (538)
.++|+|++ |+|||+ +|||+||+++||+|+|+|+|+|+++++|||||+++. +++||+|+ |+|
T Consensus 20 ~~~~~l~~--------------~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~~~--~~i 81 (448)
T 3aw5_A 20 ATYIEATA--------------SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVN--WHNDAHPS--FAI 81 (448)
T ss_dssp CSEEEEET--------------TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCC--HHHHTCGG--GCB
T ss_pred CcEEEEEE--------------EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCC--CccCCCCC--ccC
Confidence 45677777 999999 999999999999999999999999999999999874 57999997 999
Q ss_pred CCCCeEEEEEEecCCccceeeecC----chhhhhcceeeEEEEecCCCCCCCCCCCCCceEEEEeeecccChhhHHHH--
Q 009283 105 PPGKNFTYVLQVKDQIGSYFYFPS----LAFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAI-- 178 (538)
Q Consensus 105 ~pG~~~~Y~f~~~~~~Gt~wYH~H----~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~-- 178 (538)
.||++|+|+|++++++|||||||| ++.|+.+||+|+|||++++.. .+++.+.+|++|+++||+++. +++...
T Consensus 82 ~PG~~~~Y~f~~~~~~GT~wYH~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~~d~~e~~l~l~D~~~~~-~~~~~~~~ 159 (448)
T 3aw5_A 82 TPGESYNYSFDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFKYGVNDLPLVISDRRFIG-GAPVYNPT 159 (448)
T ss_dssp CTTCEEEEEEECCSCSEEEEEEECCTTTHHHHHHTTCCEEEEEECTTTT-TTCCBTTTEEEEEEEEEEEET-TEEECCCC
T ss_pred CCCCEEEEEEEcCCCCCceEeccCCCCchHHHHhccceEEEEEeCCccc-cCCCCCCceEEEEEEeeccCC-Cccccccc
Confidence 999999999999767999999999 789999999999999998754 222222389999999999986 443210
Q ss_pred hccCCCCCCCCeEEEcCCCCCCceEEEecCCEEEEEEEecCCCceEEEEE--eC---CeeEEEEEcCeecc-cceecEEE
Q 009283 179 LDSGSDLPFPDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRI--QG---HKMLLVEVEGTHTL-QNTYDSLD 252 (538)
Q Consensus 179 ~~~~~~~~~~~~~liNG~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l--~g---h~~~via~DG~~~~-p~~~~~v~ 252 (538)
.........++.++|||+. .|.++|++| +|||||||+|+.+.+.|+| +| |+|+||++||.+++ |..++++.
T Consensus 160 ~~~~~~~~~~~~~liNG~~--~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~ 236 (448)
T 3aw5_A 160 PMEMIAGFLGNAVLVNGVK--DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALF 236 (448)
T ss_dssp HHHHHHCCCCSEEEETTEE--TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEE
T ss_pred ccccccCccccEEEECCcc--cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEE
Confidence 0001123467999999999 899999999 9999999999999999999 99 99999999999998 99999999
Q ss_pred EcCCCeEEEEEEeCCCCcceEEEEEeecc--------------CCccceEEEEEecCCCCCCCCCCCCCCCccccchhhh
Q 009283 253 IHLGQSYSVLVRADQPPQGYYIVISTRFT--------------SQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQ 318 (538)
Q Consensus 253 l~pgeR~dv~v~~~~~~g~y~i~~~~~~~--------------~~~~~~~ail~y~~~~~~~~~~~p~~P~~~~~~~~~~ 318 (538)
|+|||||||+|+++ .+.|+|++..... .......++++|.+..... . |. .+
T Consensus 237 l~pgeR~dvlv~~~--~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-p~-----~L-- 301 (448)
T 3aw5_A 237 LAPAERAEVVVELG--EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAV-----P-VE-----AL-- 301 (448)
T ss_dssp ECTTCEEEEEEEEC--SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCC-----C-CC-----CC--
T ss_pred ECCcceEEEEEECC--CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCC-----C-cc-----cc--
Confidence 99999999999998 3689999864321 1112456777886543211 0 10 01
Q ss_pred hhhhcccCCCCCCCCCCCCCCCccccccceEEEEecccCCCCCeEeEEECCeeecCCCCchhhhcccCCCCccccCCCCC
Q 009283 319 ARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPD 398 (538)
Q Consensus 319 ~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~P~l~~~~~~~~g~~~~~~~~~ 398 (538)
......+. ....++++.+... ...|+|||++|..+ .|+
T Consensus 302 --------~~lp~~~~--------~~~~~~~~~l~~~------~~~~~iNg~~~~~~-~p~------------------- 339 (448)
T 3aw5_A 302 --------SDPPPEPP--------KPTRTRRFALSLS------GMQWTINGMFWNAS-NPL------------------- 339 (448)
T ss_dssp --------SCCCCCCC--------CCSEEEEEEEEEE------TTEEEETTBCCCTT-CTT-------------------
T ss_pred --------CCCCCCCC--------CCCceEEEEEeCC------CceeeECCCcCCCC-CCc-------------------
Confidence 00000000 1134567777541 13599999998532 221
Q ss_pred CCCCCCcceeeEEEE-ccCCcEEEEEEEcCC-CCCCCccccCCCceEEeecCCCCCC-CCCCCc----CCCCCCceeeEE
Q 009283 399 NPTGGGAYLQTSVMA-ADFRGFAEVVFENPE-DTLQSWHIDGHNFFAVGMDGGEWTP-ASRLTY----NLRDTISRCTVQ 471 (538)
Q Consensus 399 ~p~~~~~~~~~~~~~-~~~g~~v~~~l~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~-~~~~~~----~~~~p~~rDTv~ 471 (538)
+. ++.|++|+|+|+|.+ .+.||||||||+||||++++ .+.. .....+ +..++.|||||.
T Consensus 340 -------------~~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~G-~~~~~~~~~~~~~~~~p~~~~~rDTv~ 405 (448)
T 3aw5_A 340 -------------FEHVSVEGVELWEIVNDKASMPHPMHLHGFPMWIIERKD-SPRQVAELAVDNRGRLPTDLGLKDTVL 405 (448)
T ss_dssp -------------CCCEEECEEEEEEEEECSSSCCEEEEESSSCBEEEEEES-CCHHHHTTCCSTTCCCGGGGSCBSEEE
T ss_pred -------------eeccCCCCeEEEEEEcCCCCCCcCEEECCceEEEEEecC-CCcccccccccccCCCccccCCccEEE
Confidence 22 467999999999998 78999999999999999963 3320 111122 234557999999
Q ss_pred eCCCCEEEEE--EE---ccCcceeeeeecchhhhhcceEEEEEE
Q 009283 472 VYPKSWTAVY--VP---LDNVGMWNIRSENWARQYLGQQFYLRV 510 (538)
Q Consensus 472 vp~~g~~~ir--f~---adnpG~w~~HCHil~H~d~GMm~~~~V 510 (538)
|+|+++++|+ |+ +||| |||||||++|+|.|||..|+|
T Consensus 406 v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~V 447 (448)
T 3aw5_A 406 IWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIAV 447 (448)
T ss_dssp ECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEEE
T ss_pred eCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhCCCceEEEe
Confidence 9999999665 99 9999 999999999999999999988
No 16
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=2.4e-81 Score=661.98 Aligned_cols=411 Identities=19% Similarity=0.226 Sum_probs=309.2
Q ss_pred CeEEEEEEEEEEEecCCCeeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCCCCCCC
Q 009283 25 PYRFFNWNVTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPI 104 (538)
Q Consensus 25 ~~~~~~l~~~~~~~~~~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~tq~~i 104 (538)
..++|+|++++..++++|..+.+|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++.. .+||+| ||+|
T Consensus 16 ~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~p--~~~i 91 (488)
T 3od3_A 16 ARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPG--EVDGGP--QGII 91 (488)
T ss_dssp TTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCCH--HHHCCT--TCCB
T ss_pred CCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccCc--ccCCCC--cCcC
Confidence 457899999999999999999999999999999999999999999999999999999999998854 699998 8999
Q ss_pred CCCCeEEEEEEecCCccceeeecCc----hhhhhcceeeEEEEecCCCCCCCCC--CCCCceEEEEeeecccChhhHHHH
Q 009283 105 PPGKNFTYVLQVKDQIGSYFYFPSL----AFHKAAGGYGGIKIASRPLIPVPFD--PPAGDFTILAGDWYKKNHTDLKAI 178 (538)
Q Consensus 105 ~pG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~--~~~~e~~l~l~d~~~~~~~~~~~~ 178 (538)
.||++|+|+|++.+++||||||||. +.|+.+||+|+|||++++....+++ ...+|++|+++||+++.++++...
T Consensus 92 ~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~~~ 171 (488)
T 3od3_A 92 PPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDYQ 171 (488)
T ss_dssp CTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBCCC
T ss_pred cCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCceecc
Confidence 9999999999996558999999996 6899999999999999765433332 235699999999999765433110
Q ss_pred hc--cCCCCCCCCeEEEcCCCCCCceEEEecCCEEEEEEEecCCCceEEEEE-eCCeeEEEEEcCeec-ccceecEEEEc
Q 009283 179 LD--SGSDLPFPDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRI-QGHKMLLVEVEGTHT-LQNTYDSLDIH 254 (538)
Q Consensus 179 ~~--~~~~~~~~~~~liNG~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l-~gh~~~via~DG~~~-~p~~~~~v~l~ 254 (538)
.. .......+|.++|||+. .|.+.+ +|++|||||||+|+.+.+.|+| +||+|+||++||.++ +|+.++++.|+
T Consensus 172 ~~~~~~~~g~~gd~~lvNG~~--~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~l~~P~~~~~l~l~ 248 (488)
T 3od3_A 172 LDVMTAAVGWFGDTLLTNGAI--YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVL 248 (488)
T ss_dssp CSHHHHHHCCCCSEEEETTBS--SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESCEEEC
T ss_pred ccccccccCCCCCEEEEcCCc--CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCcccCccEeceEEEC
Confidence 00 00112467899999999 788877 5689999999999999999999 699999999999987 79999999999
Q ss_pred CCCeEEEEEEeCCCCcceEEEEEeeccC-----CccceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhcccCCCC
Q 009283 255 LGQSYSVLVRADQPPQGYYIVISTRFTS-----QVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTAS 329 (538)
Q Consensus 255 pgeR~dv~v~~~~~~g~y~i~~~~~~~~-----~~~~~~ail~y~~~~~~~~~~~p~~P~~~~~~~~~~~~~~~~~l~~~ 329 (538)
|||||||+|+++ +++.|.+++...... .......+++...........+|. .|...
T Consensus 249 pGeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~------------------~L~~~ 309 (488)
T 3od3_A 249 MGERFEVLVEVN-DNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPD------------------TLSSL 309 (488)
T ss_dssp TTCEEEEEEEEC-TTCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCS------------------CCCCC
T ss_pred CCCEEEEEEEeC-CCceEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCc------------------ccccC
Confidence 999999999999 577899987542211 001112222222111000111111 01100
Q ss_pred CCCCCCCCCCCccccccceEEEEecc--------------------cC---------CCCCe-------------EeEEE
Q 009283 330 GPRPNPQGSYHYGLINTTHTIRLQNT--------------------AP---------TINGK-------------QRYAV 367 (538)
Q Consensus 330 ~~~~~p~~~~~~~~~~~~~~~~~~~~--------------------~~---------~~~g~-------------~~~~i 367 (538)
...+.. ....++++.+... .. ...|. ..|+|
T Consensus 310 ~~~~~~-------~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~I 382 (488)
T 3od3_A 310 PALPSL-------EGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKI 382 (488)
T ss_dssp CCCCCC-------TTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEE
T ss_pred CCCccc-------ccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccceeeE
Confidence 000000 0112344444210 00 00110 13899
Q ss_pred CCeeecCCCCchhhhcccCCCCccccCCCCCCCCCCCcceeeEEEEccCCcEEEEEEEcCC-CCCCCccccCCCceEEee
Q 009283 368 NSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPE-DTLQSWHIDGHNFFAVGM 446 (538)
Q Consensus 368 Ng~~f~~p~~P~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~l~N~~-~~~HP~HlHG~~F~Vl~~ 446 (538)
||+.|.. +.| .++++.|++|+|+|.|.+ .+.|||||||++|+|+++
T Consensus 383 NG~~~~~-~~~--------------------------------~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~ 429 (488)
T 3od3_A 383 NGQAFDM-NKP--------------------------------MFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSE 429 (488)
T ss_dssp TTBCCCT-TCC--------------------------------SEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEB
T ss_pred CCeeCCC-CCC--------------------------------ceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEecc
Confidence 9999852 112 145688999999999988 578999999999999999
Q ss_pred cCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEcc----CcceeeeeecchhhhhcceEEEEEE
Q 009283 447 DGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLD----NVGMWNIRSENWARQYLGQQFYLRV 510 (538)
Q Consensus 447 ~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad----npG~w~~HCHil~H~d~GMm~~~~V 510 (538)
++.... ..++.|||||.|+ +++++|+|++| +||.||||||+|+|||.|||..|+|
T Consensus 430 ~g~~~~--------~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~Hed~GMm~~f~V 488 (488)
T 3od3_A 430 NGKPPA--------AHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV 488 (488)
T ss_dssp TTBCCC--------GGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSHHHHHTTCEEEEEC
T ss_pred CCCccc--------cccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCchHHHhcCCcEEEEC
Confidence 754322 2346799999999 99999999974 5789999999999999999999986
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=2.6e-79 Score=662.19 Aligned_cols=440 Identities=16% Similarity=0.129 Sum_probs=316.5
Q ss_pred CCeEEEEEEEEEEEecC--CCeeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCCCC-----------------------
Q 009283 24 SPYRFFNWNVTYGDIYP--LGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEP----------------------- 78 (538)
Q Consensus 24 ~~~~~~~l~~~~~~~~~--~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~~~----------------------- 78 (538)
...++|+|++++...++ ++..+++|+|||++|||||+|++||+|+|+++|+|++.
T Consensus 30 ~~~~~~~l~~~~~~~~l~~~~~~t~~~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~~ 109 (612)
T 2g23_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCeEEEEEEEEEEEEEECCCCcceEEEEECCccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCcccccc
Confidence 44678999999998875 34689999999999999999999999999999999853
Q ss_pred ------------------ceeeeccccCCCCCCCCCCCCCCCCCCCCCeEEEEEEecCCccceeeecCch----hhhhcc
Q 009283 79 ------------------FLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLA----FHKAAG 136 (538)
Q Consensus 79 ------------------~siH~HG~~~~~~~~~DG~~~tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~----~q~~~G 136 (538)
+++||||+++.. .+||++ ||+|.||++|+|+|++.+++||||||||.. .|+.+|
T Consensus 110 p~~~g~~~~~~~~~~~~~tsiH~HG~~~~~--~~DG~p--~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~G 185 (612)
T 2g23_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTGG--GNDGWA--DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAG 185 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCCT--TTSCCG--GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTTT
T ss_pred cccccccccccccccCCceEEEcCCCCCCC--ccCCCC--cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhcc
Confidence 899999998864 599987 899999999999999966799999999974 599999
Q ss_pred eeeEEEEecCCCCCCCCCCCCCceEEEEeeecccChhh--HHH-------Hhcc---C-C----CCCCCCeEEEcCCCCC
Q 009283 137 GYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTD--LKA-------ILDS---G-S----DLPFPDGLVINGRGSN 199 (538)
Q Consensus 137 l~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~--~~~-------~~~~---~-~----~~~~~~~~liNG~~~~ 199 (538)
|+|+|||+++++.+.+++.+++|++|+|+||+++.+.. +.. .+.. + . ....+|.++|||+.
T Consensus 186 L~G~liV~~~~~~~~~lp~~d~d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~~-- 263 (612)
T 2g23_A 186 LYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRI-- 263 (612)
T ss_dssp CEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEE--
T ss_pred ceeEEEEcCcccccccCCCCcceEEEEEEEEeccCCcccccccccccccccccccccccCcccccCCcCCEEEECCcc--
Confidence 99999999976544445567999999999999975421 100 0010 1 0 12467999999999
Q ss_pred CceEEEecCCEEEEEEEecCCCceEEEEEeCC-------eeEEEEEcCeecc-cceec------EEEEcCCCeEEEEEEe
Q 009283 200 ANTFTVDQGKTYRFRISNVGISTSINFRIQGH-------KMLLVEVEGTHTL-QNTYD------SLDIHLGQSYSVLVRA 265 (538)
Q Consensus 200 ~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh-------~~~via~DG~~~~-p~~~~------~v~l~pgeR~dv~v~~ 265 (538)
.|.++|++| +|||||||+|+.+.+.|+|++| +|+|||+||.+++ |+.++ +|.|+|||||||+|++
T Consensus 264 ~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l~pgeR~dvlVd~ 342 (612)
T 2g23_A 264 WPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDF 342 (612)
T ss_dssp SCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEEC
T ss_pred CCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEECCcCeEEEEEEC
Confidence 899999999 9999999999999999999999 8999999999995 89998 9999999999999999
Q ss_pred CCCCc-ceEEEEEeeccCC-------ccceEEEEEec--CCCCCCCCCCCCC--C-CccccchhhhhhhhcccCCCCCCC
Q 009283 266 DQPPQ-GYYIVISTRFTSQ-------VLSATSVLHYS--NSAGSVSGPPPGG--P-TTQIDWSLEQARSLRRNLTASGPR 332 (538)
Q Consensus 266 ~~~~g-~y~i~~~~~~~~~-------~~~~~ail~y~--~~~~~~~~~~p~~--P-~~~~~~~~~~~~~~~~~l~~~~~~ 332 (538)
++.+| +|+|+........ ......++++. ......+..+|.. + ...+...+....... .+. .
T Consensus 343 ~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~~~~r~~-~~~--~-- 417 (612)
T 2g23_A 343 RALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHGHRLI-VLT--P-- 417 (612)
T ss_dssp TTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCEEEEE-EEC--C--
T ss_pred CCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCcccccceeEE-eec--c--
Confidence 97666 5777765321100 00111344443 2221111112210 0 000000000000000 000 0
Q ss_pred CCCCCCCCccccccceEEEEeccc---------------CCCCC-eEeEEECCeeecCCCCchhhhcccCCCCccccCCC
Q 009283 333 PNPQGSYHYGLINTTHTIRLQNTA---------------PTING-KQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSI 396 (538)
Q Consensus 333 ~~p~~~~~~~~~~~~~~~~~~~~~---------------~~~~g-~~~~~iNg~~f~~p~~P~l~~~~~~~~g~~~~~~~ 396 (538)
+. .. +.....+.+.+.... ...+| ...|+|||+.|.+
T Consensus 418 ~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~~---------------------- 470 (612)
T 2g23_A 418 PG---TK--GSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATFND---------------------- 470 (612)
T ss_dssp TT---CT--TSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECSTTS----------------------
T ss_pred cc---cc--ccccccceeeccccccccccccccccceeeeccCCceeEEEECCccCCC----------------------
Confidence 00 00 000000111111000 00122 2457788877642
Q ss_pred CCCCCCCCcceeeEEEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCC----------------CCCcC
Q 009283 397 PDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPAS----------------RLTYN 460 (538)
Q Consensus 397 ~~~p~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~----------------~~~~~ 460 (538)
...++++.|++|+|+|.|.+.+.||||||||.|||+++++..++..+ ...++
T Consensus 471 ------------~~~~~v~~G~~v~w~l~N~~~~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~ 538 (612)
T 2g23_A 471 ------------GLGFTIGEGTHEQWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLA 538 (612)
T ss_dssp ------------CCCEEEETTCEEEEEEEECSSSCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCC
T ss_pred ------------CCceEecCCCEEEEEEEeCCCCCCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCC
Confidence 11246788999999999999899999999999999998643221100 02244
Q ss_pred CCCCCceeeEEeCCCCEEEEEEEcc-CcceeeeeecchhhhhcceEEEEEEecCC
Q 009283 461 LRDTISRCTVQVYPKSWTAVYVPLD-NVGMWNIRSENWARQYLGQQFYLRVYSSA 514 (538)
Q Consensus 461 ~~~p~~rDTv~vp~~g~~~irf~ad-npG~w~~HCHil~H~d~GMm~~~~V~~p~ 514 (538)
..++.|||||.|+|+++++|+|+|| |||.||||||||+|+|.|||..|+|.+.+
T Consensus 539 ~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHil~Hed~GMm~~f~V~p~~ 593 (612)
T 2g23_A 539 PNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPE 593 (612)
T ss_dssp TTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHTTTCEEEEEEECHH
T ss_pred cccccccCeEEECCCcEEEEEEEeCCCCccEEEEeCchhHhhcCCceEEEECchh
Confidence 5567899999999999999999999 99999999999999999999999997543
No 18
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=8.6e-55 Score=501.47 Aligned_cols=390 Identities=14% Similarity=0.179 Sum_probs=268.0
Q ss_pred cccCCCeEEEEEEEEEEEecC--CC--------------------------eeeEEE-------EEcCc--------CcC
Q 009283 20 TRGESPYRFFNWNVTYGDIYP--LG--------------------------VKQQGI-------LINGQ--------FPG 56 (538)
Q Consensus 20 ~~~~~~~~~~~l~~~~~~~~~--~G--------------------------~~~~~~-------~~Ng~--------~pg 56 (538)
..+.+.+|+|.|.|.+..+.. .| +.+++. +||+. +||
T Consensus 15 ~~~~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~PG 94 (1065)
T 2j5w_A 15 TPAWAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVWLGFLG 94 (1065)
T ss_dssp -----CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGGGTTSC
T ss_pred cccccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccccccCCcC
Confidence 344567999999999987642 22 233344 57877 999
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceeeeccccCC----CCCCCCCCCC---CCCCCCCCCeEEEEEEecCC---------c
Q 009283 57 PSIEAVTNDNLIISVFNALDEPFLISWNGVQQR----RNSWQDGVYG---TNCPIPPGKNFTYVLQVKDQ---------I 120 (538)
Q Consensus 57 P~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~----~~~~~DG~~~---tq~~i~pG~~~~Y~f~~~~~---------~ 120 (538)
|+||+++||+|+|+|+|+|+++++|||||++++ +.+++||+++ +||+|+||++|+|+|+++++ +
T Consensus 95 P~Ir~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~~a 174 (1065)
T 2j5w_A 95 PIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNC 174 (1065)
T ss_dssp CCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSCSE
T ss_pred CeEEEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCCCc
Confidence 999999999999999999999999999999986 3356777774 79999999999999999754 4
Q ss_pred cceeeecCchh--hhhcceeeEEEEecCCCCCCCCC-CCCCceEEEEee------ecccChhhHHHHh-ccCCC----C-
Q 009283 121 GSYFYFPSLAF--HKAAGGYGGIKIASRPLIPVPFD-PPAGDFTILAGD------WYKKNHTDLKAIL-DSGSD----L- 185 (538)
Q Consensus 121 Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~~~~~~-~~~~e~~l~l~d------~~~~~~~~~~~~~-~~~~~----~- 185 (538)
||||||||.+. |+.+||+|+|||++++....+.+ ..|+|++|+++| |++... +.... +.+.. .
T Consensus 175 GT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~--~~~~~~~p~~~~~~~~~ 252 (1065)
T 2j5w_A 175 VTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDN--IKTYCSEPEKVDKDNED 252 (1065)
T ss_dssp EEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHH--HHHHCSCGGGCCTTCHH
T ss_pred eEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccch--hhhhhcCcccccccccc
Confidence 99999999864 56899999999999875433322 357899999995 444321 11111 01000 0
Q ss_pred --CCCCeEEEcCCCCC-CceEEEecCCEEEEEEEecCCC-ceEEEEEeCCeeEEEEEcCeecccceecEEEEcCCCeEEE
Q 009283 186 --PFPDGLVINGRGSN-ANTFTVDQGKTYRFRISNVGIS-TSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSV 261 (538)
Q Consensus 186 --~~~~~~liNG~~~~-~p~~~v~~G~~~rlRliN~~~~-~~~~~~l~gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv 261 (538)
..++.++|||+.+. .+.++|++||+|||||+|+|.. ..+.|+|+||.|+ ++|..+|++.|+||||+||
T Consensus 253 ~~~~~~~~~iNG~~~~~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~--------v~p~~~dtv~I~pGer~dV 324 (1065)
T 2j5w_A 253 FQQSNRMYSVNGYTFGSLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALT--------NKNYRIDTINLFPATLFDA 324 (1065)
T ss_dssp HHHHTEEEEETTEETTCCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEE--------ETTEEESEEEECBTCEEEE
T ss_pred ccccCcEEEECCccCCCCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEE--------ECCeeecEEEECCCcEEEE
Confidence 02357999999852 4789999999999999999975 6899999999999 3567899999999999999
Q ss_pred EEEeCCCCcceEEEEEeeccCCccceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhcccCCCCCC------CCCC
Q 009283 262 LVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGP------RPNP 335 (538)
Q Consensus 262 ~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~P~~~~~~~~~~~~~~~~~l~~~~~------~~~p 335 (538)
+|++++ +|.|+|+++..... .....+.++|.+.....+.+.|..+ .... .+.+++++.|++.+... .+++
T Consensus 325 lv~~~~-pG~y~i~~h~~~h~-~~Gm~~~~~V~~~~~~~~~~~~~g~-~~~~-~~i~A~e~~wdy~~~~~~~~~~~~~~~ 400 (1065)
T 2j5w_A 325 YMVAQN-PGEWMLSCQNLNHL-KAGLQAFFQVQECNKSSSKDNIRGK-HVRH-YYIAAEEIIWNYAPSGIDIFTKENLTA 400 (1065)
T ss_dssp EEECCS-CEEEEEEECSHHHH-HTTCEEEEEEECSCCCCCCCCCTTS-EEEE-EEEEEEEEEEESCTTSBCTTTCCBTTC
T ss_pred EEEeCC-CeeEEEEecCcchh-hCCCEEEEEEecCCCcccccccccc-ceeE-EEEeceecccccCCCCcccccccccCC
Confidence 999994 89999999864321 1246778888766543333332221 0111 23345666777765542 1222
Q ss_pred CCCCCccccccceEEEEecccCCCCCeEeEEECCeeecCCCCchhhhcccCCCCccccCCCCCCCCCCCcceeeEEEEcc
Q 009283 336 QGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAAD 415 (538)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~P~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~ 415 (538)
++++ ...+ |......+++++...++ +.|.+ +.|..+ ....|.....-...+++.++
T Consensus 401 ~~s~-------~~~~-l~~~~~~ig~~y~k~v~-~~y~d--------------~~f~~~-~~~~~~~~~~g~lgpvi~a~ 456 (1065)
T 2j5w_A 401 PGSD-------SAVF-FEQGTTRIGGSYKKLVY-REYTD--------------ASFTNR-KERGPEEEHLGILGPVIWAE 456 (1065)
T ss_dssp TTCT-------THHH-HCCBTTBCCSEEEEEEE-EEESS--------------TTCCSB-CCCCGGGGGGTTSCCCEEEE
T ss_pred Cccc-------chhh-hccCCcccCceEeeeee-ecccC--------------CceEEc-CcCCcccccccccCceEEEe
Confidence 2211 1111 33333345666666666 55532 122211 00011100111124678899
Q ss_pred CCcEEEEEEEcCCCCCCCccccCCCceEEeec
Q 009283 416 FRGFAEVVFENPEDTLQSWHIDGHNFFAVGMD 447 (538)
Q Consensus 416 ~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~ 447 (538)
.|++++++|.|.....|+||+||+.|++++.|
T Consensus 457 ~gd~i~i~f~N~~~~~~s~h~hG~~f~~~~~g 488 (1065)
T 2j5w_A 457 VGDTIRVTFHNKGAYPLSIEPIGVRFNKNNEG 488 (1065)
T ss_dssp TTEEEEEEEEECSSSCBCCEEESSBCCGGGCS
T ss_pred CCCEEEEEEEECCCCCccCcccceeeeccCCC
Confidence 99999999999999999999999999988753
No 19
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=1.2e-53 Score=430.54 Aligned_cols=266 Identities=21% Similarity=0.337 Sum_probs=225.1
Q ss_pred CeEEEEEEEEEEEecC-CCeeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCC-CCC
Q 009283 25 PYRFFNWNVTYGDIYP-LGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYG-TNC 102 (538)
Q Consensus 25 ~~~~~~l~~~~~~~~~-~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-tq~ 102 (538)
.+|+|+|++++..+++ +|..+.+|+|||++|||+|+|++||+|+|+|+|.++.+++|||||+++..++++||+|+ +||
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~ 80 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQH 80 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccc
Confidence 3789999999999987 58889999999999999999999999999999999999999999999988789999999 999
Q ss_pred CCCCCCeEEEEEEecCCccceeeecCchhhh---hcceeeEEEEecCCCCCCCCCCCCCceEEEEeeecccChhhHHHHh
Q 009283 103 PIPPGKNFTYVLQVKDQIGSYFYFPSLAFHK---AAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAIL 179 (538)
Q Consensus 103 ~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~---~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~ 179 (538)
+|.||++++|+|++ +++||||||||...+. .+||+|+|||++++..+.+. ..++|++|+++||+++..... .
T Consensus 81 ~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~-~~d~e~~l~l~dw~~~~~~~~---~ 155 (318)
T 3g5w_A 81 AIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEK-TVTKDYILMLSDWVSSWANKP---G 155 (318)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHH-TCCEEEEEEEEEECGGGTTCT---T
T ss_pred cCCCCCEEEEEEEc-CCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccc-cccceeEEEEEeecccccccc---c
Confidence 99999999999999 5899999999986543 48999999999875422111 348899999999987643211 1
Q ss_pred ccCCCCCCCCeEEEcCCCCC-CceEEEecCCEEEEEEEecCCCceEEEEEeCCeeEEEEEcCeec-ccceecEEEEcCCC
Q 009283 180 DSGSDLPFPDGLVINGRGSN-ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHT-LQNTYDSLDIHLGQ 257 (538)
Q Consensus 180 ~~~~~~~~~~~~liNG~~~~-~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~-~p~~~~~v~l~pge 257 (538)
..+.....++.++|||+.+. .+.++|++|++|||||+|++.. .|.|||+||.|+||+.||.++ +|..+|++.|+|||
T Consensus 156 ~~~~~~~~~d~~~ING~~~~~~~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~~~dtv~l~pge 234 (318)
T 3g5w_A 156 EGGIPGDVFDYYTINAKSFPETQPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPIKGDTVLIGPGE 234 (318)
T ss_dssp CCCCTTCCCCEEEETTBCBTSSCCEEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEEEESEEEECTTC
T ss_pred cCCCCCCcCcEEEEcCcCCCCCccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCccccEEEECCCC
Confidence 11222235789999999842 2459999999999999999976 799999999999999999998 68899999999999
Q ss_pred eEEEEEEeCCCCcceEEEEEeeccCC-----ccceEEEEEecCCC
Q 009283 258 SYSVLVRADQPPQGYYIVISTRFTSQ-----VLSATSVLHYSNSA 297 (538)
Q Consensus 258 R~dv~v~~~~~~g~y~i~~~~~~~~~-----~~~~~ail~y~~~~ 297 (538)
|+||+++++ .||.|.++++...... .....+.|+|.+..
T Consensus 235 r~~v~~~a~-~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 235 RYDVILNMD-NPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEEEEEECC-SCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EEEEEEECC-CCeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 999999999 7999999998753221 13457889998754
No 20
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=3.4e-56 Score=493.81 Aligned_cols=239 Identities=17% Similarity=0.224 Sum_probs=181.1
Q ss_pred EEEEEEEEEecCC-CeeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCCCCceeeeccccCCC----CCCCCCCC---CC
Q 009283 29 FNWNVTYGDIYPL-GVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRR----NSWQDGVY---GT 100 (538)
Q Consensus 29 ~~l~~~~~~~~~~-G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~----~~~~DG~~---~t 100 (538)
-.+++++....+. |..+..|+ ++|||+|||++||+|+|+|+|+|++++||||||+++.. .+++||++ .|
T Consensus 49 k~l~~~~~~~~~~~~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~~~~DG~p~~Dg~~~~~vt 125 (742)
T 2r7e_A 49 KTLFVEFTDHLFNIAKPRPPWM---GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKASEGAEYDDQTSQREKE 125 (742)
T ss_dssp CCCCCCCSSSCCCCSSCSTTTT---TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCCSSSSCCCSSCSCCSSSSS
T ss_pred EEEEEEecceEEECCccccccc---CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccCccccCCccCCCCcccccc
Confidence 3566666555654 66666664 89999999999999999999999999999999998752 33444443 27
Q ss_pred CCCCCCCCeEEEEEEecC---------CccceeeecCchh--hhhcceeeEEEEecCCCCCCCCCCCCCceEEEEee---
Q 009283 101 NCPIPPGKNFTYVLQVKD---------QIGSYFYFPSLAF--HKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGD--- 166 (538)
Q Consensus 101 q~~i~pG~~~~Y~f~~~~---------~~Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d--- 166 (538)
||+|+||++|+|+|++++ ++||||||||.+. |+.+||+|+|||+++...........+|+++++++
T Consensus 126 q~~I~PG~s~tY~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~~de 205 (742)
T 2r7e_A 126 DDKVFPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVFDE 205 (742)
T ss_dssp SSSCCTTCEECCEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEECCCC
T ss_pred cCcCCCCCeEEEEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeecccC
Confidence 999999999999999853 4699999999865 89999999999999764322111123788888764
Q ss_pred ---ecccChhhHHHHhccCCCCCCCCeEEEcCCCC-CCceEEEecCCEEEEEEEecCCCc-eEEEEEeCCeeEEEEEcCe
Q 009283 167 ---WYKKNHTDLKAILDSGSDLPFPDGLVINGRGS-NANTFTVDQGKTYRFRISNVGIST-SINFRIQGHKMLLVEVEGT 241 (538)
Q Consensus 167 ---~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~-~~p~~~v~~G~~~rlRliN~~~~~-~~~~~l~gh~~~via~DG~ 241 (538)
|+++........+.........+.++|||+.+ ..+.++|++|++|||||+|++... .|.|||+||.|+|++.
T Consensus 206 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ING~~~~~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~f~Vvg~--- 282 (742)
T 2r7e_A 206 GKSWHSETKNSLMQDRDAASARAWPKMHTVNGYVNRSLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRNH--- 282 (742)
T ss_dssp SSSSCCCCCC-------CCSCCCCCCCCEETTBCTBCCCCCEECSSSCEEEECCCCCSSSCCCCCCCTTCCCEETTE---
T ss_pred CccccccccccccccCCCccccccCceEEECCccCCCCcceEEcCCCEEEEEEEeCCCCCcceEEEECCCEEEEEeE---
Confidence 44432211000011111122356789999985 347899999999999999999875 7999999999999742
Q ss_pred ecccceecEEEEcCCCeEEEEEEeCCCCcceEEEEEee
Q 009283 242 HTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTR 279 (538)
Q Consensus 242 ~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 279 (538)
.+|++.|.|||+++|.++++ .+|.|.+.++..
T Consensus 283 -----~~Dtv~v~Pg~~~~v~~~~~-~pG~w~~hCH~~ 314 (742)
T 2r7e_A 283 -----RQASLEISPITFLTAQTLLM-DLGQFLLFCHIS 314 (742)
T ss_dssp -----ECCSCCCCTTCCCEEEECCC-SCSEECCCCCSS
T ss_pred -----ecceEEeCCCcEEEEEEEeC-CCeeEEEEeCCh
Confidence 37889999999999999998 689999988764
No 21
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=2.1e-52 Score=425.99 Aligned_cols=266 Identities=23% Similarity=0.412 Sum_probs=224.4
Q ss_pred CeEEEEEEEEEEEecCC-CeeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCC-CCC
Q 009283 25 PYRFFNWNVTYGDIYPL-GVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYG-TNC 102 (538)
Q Consensus 25 ~~~~~~l~~~~~~~~~~-G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-tq~ 102 (538)
.+++|+|++++..++++ |.++.+|+|||++|||+|+|++||+|+|+|+|.++++++|||||+++...+++||+|+ +||
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~ 81 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQ 81 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccC
Confidence 36899999999999875 9999999999999999999999999999999999999999999999988888999998 999
Q ss_pred CCCCCCeEEEEEEecCCccceeeecCchh--hhh-cceeeEEEEecCCCCCCCCCCCCCceEEEEeeecccChhhHHHHh
Q 009283 103 PIPPGKNFTYVLQVKDQIGSYFYFPSLAF--HKA-AGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAIL 179 (538)
Q Consensus 103 ~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~--q~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~ 179 (538)
+|.||++|+|+|+++ ++||||||||... |+. +||+|+|||+++.....+. ..++|++++++||+....... .
T Consensus 82 ~I~PG~~~~y~f~~~-~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~~-~~d~e~~l~l~d~~~~~~~~~---~ 156 (339)
T 2zwn_A 82 PIEAGDSYTYKFKAD-RIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIEK-RVTKDVIMMMSTWESAVADKY---G 156 (339)
T ss_dssp CBCTTCEEEEEEECC-SCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTGG-GCSEEEEEEEEEECGGGTTCT---T
T ss_pred ccCCCCeEEEEEECC-CCEEEEEEecCCchhhhhcCCceEeEEecCCCcccccc-cCCceEEEEeeheeccccccc---C
Confidence 999999999999995 8999999999764 888 9999999999865432111 347899999999987421110 0
Q ss_pred ccCCCCCCCCeEEEcCCCCC-CceEEEecCCEEEEEEEecCCCceEEEEEeCCeeEEEEEcCeecc-cceecEEEEcCCC
Q 009283 180 DSGSDLPFPDGLVINGRGSN-ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTL-QNTYDSLDIHLGQ 257 (538)
Q Consensus 180 ~~~~~~~~~~~~liNG~~~~-~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~-p~~~~~v~l~pge 257 (538)
..+.....++.++|||+.+. .+.++|++|++|||||+|++.. .|.|||+||.|+||+.||.+++ |..+|++.|+|||
T Consensus 157 ~~g~~~~~~~~~~ING~~~~~~~~~~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~DG~~~~~p~~~dtv~l~pg~ 235 (339)
T 2zwn_A 157 EGGTPMNVADYFSVNAKSFPLTQPLRVKKGDVVKIRFFGAGGG-IHAMHSHGHDMLVTHKDGLPLDSPYYADTVLVSPGE 235 (339)
T ss_dssp CCCSTTSCCCEEEETTBCTTSSCCEEECTTCEEEEEEEECSSS-CEEEEETTCCEEEEEETTEEEEEEEEESEEEECTTC
T ss_pred CCCCCccccceEEEccccCCCcccEEECCCCEEEEEEEeCCCc-eEEEEECCcEEEEEEeCCeecCCCcEEEEEEECCCC
Confidence 11112235789999999852 2459999999999999999965 8999999999999999999986 7889999999999
Q ss_pred eEEEEEEeCCCCcceEEEEEeecc-----CCccceEEEEEecCCC
Q 009283 258 SYSVLVRADQPPQGYYIVISTRFT-----SQVLSATSVLHYSNSA 297 (538)
Q Consensus 258 R~dv~v~~~~~~g~y~i~~~~~~~-----~~~~~~~ail~y~~~~ 297 (538)
|+||+|+++ .+|.|.++++.... .......++++|.+..
T Consensus 236 r~~v~~~~~-~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 236 RYDVIIEAD-NPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp EEEEEEECC-SCSEEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred EEEEEEEeC-CCeeEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 999999998 68999999876432 1223457899998754
No 22
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=1.2e-50 Score=401.29 Aligned_cols=246 Identities=17% Similarity=0.170 Sum_probs=196.8
Q ss_pred cCCCeEEEEEEEEEEEecCCCeeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCCCC
Q 009283 22 GESPYRFFNWNVTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTN 101 (538)
Q Consensus 22 ~~~~~~~~~l~~~~~~~~~~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~tq 101 (538)
+.+.+|+|+|++++. ..+.....+++|||++|||+||+++||+|+|+|+|+|+++++|||||+++.. .+||++.+|
T Consensus 3 ~~g~~~~~~l~~~~~--~~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~--~~DG~~~t~ 78 (276)
T 3kw8_A 3 AGGEVRHLKMYAEKL--ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI--SSDGTAMNK 78 (276)
T ss_dssp -CCCEEEEEEEEEEC--TTSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCCTTTT
T ss_pred CcceEEEEEEEEEeC--CCCceecceeccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccCC--ccCCCcCCc
Confidence 345689999999974 3344455778899999999999999999999999999999999999998864 699999899
Q ss_pred CCCCCCCeEEEEEEecC------------CccceeeecCc------hhhhhcceeeEEEEecCCCCCCCCCCCCCceEEE
Q 009283 102 CPIPPGKNFTYVLQVKD------------QIGSYFYFPSL------AFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTIL 163 (538)
Q Consensus 102 ~~i~pG~~~~Y~f~~~~------------~~Gt~wYH~H~------~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~ 163 (538)
|+|.||++|+|+|++++ ++||||||||. ..|+.+||+|+|||+++... . .|+|++++
T Consensus 79 ~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~--~---~drE~~l~ 153 (276)
T 3kw8_A 79 SDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV--L---PDATHTIV 153 (276)
T ss_dssp CSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC--C---CSEEEEEE
T ss_pred CCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCc--c---cccceEEE
Confidence 99999999999999963 37999999997 36899999999999997632 1 15666655
Q ss_pred EeeecccChhhHHHHhccCCCCCCCCeEEEcCCCCCCceEEEecCCEEEEEEEecCCCceEEEEEeCCeeEEEEEcCeec
Q 009283 164 AGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHT 243 (538)
Q Consensus 164 l~d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~ 243 (538)
+++| +|||+
T Consensus 154 l~~~------------------------~iNG~----------------------------------------------- 162 (276)
T 3kw8_A 154 FNDM------------------------TINNR----------------------------------------------- 162 (276)
T ss_dssp EETT------------------------EETTC-----------------------------------------------
T ss_pred eccc------------------------cccee-----------------------------------------------
Confidence 4221 11111
Q ss_pred ccceecEEEEcCCCeEEEEEEeCCCCcceEEEEEeeccCCccceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhc
Q 009283 244 LQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLR 323 (538)
Q Consensus 244 ~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~P~~~~~~~~~~~~~~~ 323 (538)
T Consensus 163 -------------------------------------------------------------------------------- 162 (276)
T 3kw8_A 163 -------------------------------------------------------------------------------- 162 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCCCCCCCCCCCccccccceEEEEecccCCCCCeEeEEECCeeecCCCCchhhhcccCCCCccccCCCCCCCCCC
Q 009283 324 RNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGG 403 (538)
Q Consensus 324 ~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~P~l~~~~~~~~g~~~~~~~~~~p~~~ 403 (538)
.|. .
T Consensus 163 -----------------------------------------------~~~--~--------------------------- 166 (276)
T 3kw8_A 163 -----------------------------------------------KPH--T--------------------------- 166 (276)
T ss_dssp -----------------------------------------------CTT--C---------------------------
T ss_pred -----------------------------------------------ccc--C---------------------------
Confidence 110 0
Q ss_pred CcceeeEEEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEE
Q 009283 404 GAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVP 483 (538)
Q Consensus 404 ~~~~~~~~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ 483 (538)
...++++.|++|+|+|.|.+.+.||||||||.|++++.| .+... ...+.+|||+.|+|++++.++|+
T Consensus 167 -----~p~i~v~~G~~vri~l~N~~~~~Hp~HlHG~~f~v~~~G--~~~~p------~~~~~~~Dtv~v~pg~~~~~~~~ 233 (276)
T 3kw8_A 167 -----GPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADNRTG--ILTGP------DDPSRVIDNKITGPADSFGFQII 233 (276)
T ss_dssp -----CCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESSSSS--SCCST------TCCCCEESEEEECTTCEEEEEEE
T ss_pred -----CCCEEEecCCEEEEEEecCCCcceeEEEccceeEEeccC--ccCCC------cccccCCccEEeCCCceEEEEEE
Confidence 001234669999999999988899999999999998643 23211 12246999999999999999999
Q ss_pred cc---CcceeeeeecchhhhhcceEEEEEEecCCCc
Q 009283 484 LD---NVGMWNIRSENWARQYLGQQFYLRVYSSANS 516 (538)
Q Consensus 484 ad---npG~w~~HCHil~H~d~GMm~~~~V~~p~~~ 516 (538)
++ |||.|+||||+++|++.|||+.|.|.++++.
T Consensus 234 ~~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~~~ 269 (276)
T 3kw8_A 234 AGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGT 269 (276)
T ss_dssp TTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTSC
T ss_pred eccCCCCCeEEEECCCchHhhCCCeEEEEEeCCCCC
Confidence 97 8999999999999999999999999988654
No 23
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=1.8e-50 Score=428.37 Aligned_cols=398 Identities=15% Similarity=0.119 Sum_probs=264.8
Q ss_pred CCCeEEEEEEEEEEEecCCCeeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCCCCC
Q 009283 23 ESPYRFFNWNVTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNC 102 (538)
Q Consensus 23 ~~~~~~~~l~~~~~~~~~~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~tq~ 102 (538)
.+.+++++++++.+.+.++| .+.+|||++ ||+|+|++||+|+|+|+|.+...+++||||... .++|
T Consensus 25 ~~~~~~~~~~~~~~~~~f~g---~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~----------~~~~ 90 (447)
T 2dv6_A 25 APVVFTLRTGIAEGRMVYIG---VGGDIDHKI-NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAA----------RSAI 90 (447)
T ss_dssp CCEEEEEEEEEETTEEEEEE---ESGGGTTCB-SCCEEEETTCEEEEEEECSSSSCBCCEETTTTE----------ECCC
T ss_pred CCceEEEEEEecccEEEEec---cceeecCCc-CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCc----------ccce
Confidence 33445566666655555554 456999999 999999999999999999998889999999631 1579
Q ss_pred CCCCCCeEEEEEEecCCccceeeecCchhhhhcceeeEEEEecCCCCCCC--CC---CCCCceEEEEeeecccChh--hH
Q 009283 103 PIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASRPLIPVP--FD---PPAGDFTILAGDWYKKNHT--DL 175 (538)
Q Consensus 103 ~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~--~~---~~~~e~~l~l~d~~~~~~~--~~ 175 (538)
+|.||++++|.|++. ++||||||||...|+.+||+|.|+|+++...... +. ....+++..+ |+...... .+
T Consensus 91 ~i~pG~~~~~~f~~~-~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~~~l 168 (447)
T 2dv6_A 91 VNGKNASSTFSFVAS-KVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKTVRIDL 168 (447)
T ss_dssp BCSTTBEEEEEEECC-SCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCEEEEEE
T ss_pred ecCCCCeEEEEEEcC-CCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcEEEEEE
Confidence 999999999999995 7999999999989999999999999987542210 00 0001111111 11000000 00
Q ss_pred H-HHhcc-CCCCCCCCeEEEcCCCCCCceEEEecCCEEEEEEEecCC-CceEEEEEeCCeeEEEEEcCeecccceecEEE
Q 009283 176 K-AILDS-GSDLPFPDGLVINGRGSNANTFTVDQGKTYRFRISNVGI-STSINFRIQGHKMLLVEVEGTHTLQNTYDSLD 252 (538)
Q Consensus 176 ~-~~~~~-~~~~~~~~~~liNG~~~~~p~~~v~~G~~~rlRliN~~~-~~~~~~~l~gh~~~via~DG~~~~p~~~~~v~ 252 (538)
. ..... .......+.+++||+.. .|.+++++|++|||||+|.+. ...+.+++||. ++.||.+ +++.
T Consensus 169 ~~~~~~~~~~~g~~~~~~~~NG~~p-gp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~----~~~DG~~------~~~~ 237 (447)
T 2dv6_A 169 ETVEVKGQLDDNTTYTYWTFNGKVP-GPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA----TGPGGAA------AFTQ 237 (447)
T ss_dssp EEEEEEEEEETTEEEEEEEETTBBS-CCCEEEETTCEEEEEEEECTTCSSCBCCEETTC----CSGGGGG------GGCC
T ss_pred EEEEEEEeccCCceeEEEEECCccC-CCeEEecCCCEEEEEEEeCCCCceeEEEeeccc----cCCCCCC------ccEE
Confidence 0 00000 00112346799999852 599999999999999999985 34677777774 3578873 2345
Q ss_pred EcCCCeEEEEEEeCCCCcceEEEEEeecc--CCccceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhcccCCCCC
Q 009283 253 IHLGQSYSVLVRADQPPQGYYIVISTRFT--SQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASG 330 (538)
Q Consensus 253 l~pgeR~dv~v~~~~~~g~y~i~~~~~~~--~~~~~~~ail~y~~~~~~~~~~~p~~P~~~~~~~~~~~~~~~~~l~~~~ 330 (538)
|.||||++++++++ .+|+||++++.... .......+.+.|.+.. .+|. .+.+..+.. . ++.....
T Consensus 238 i~pG~~~~~~~~~~-~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~-----~~P~---~d~~~~~~~-~--~~~~~~~- 304 (447)
T 2dv6_A 238 TDPGEETVVTFKAL-IPGIYVYHCATPSVPTHITNGMYGLLLVEPEG-----GLPQ---VDREFYVMQ-G--EIYTVKS- 304 (447)
T ss_dssp BCTTCEEEEEEECC-SCEEEEEECCSSSHHHHHHTTCEEEEEEECTT-----CSCC---CSEEEEEEE-E--EECBSSC-
T ss_pred eCCCCEEEEEEECC-CCeEEEEEeCCCChHHHHhCCCEEEEEEeCCC-----CCCC---CCeeEEEEe-c--ccccCCc-
Confidence 99999999999998 57999999875210 1112345667776432 1221 111100000 0 0100000
Q ss_pred CCCCCCCCCCccccccceEEEEecccCCCCCeEeEEECCeeecCCCCchhhhcccCCCCccccCCCCCCCCCCCcceeeE
Q 009283 331 PRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTS 410 (538)
Q Consensus 331 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~P~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~ 410 (538)
.... +.. .+.+... .......|.|||+.+... ...
T Consensus 305 --~~~~-----g~~----~~~~~~~--~~~~~~~~~iNG~~~~~~--------------------------------~~~ 339 (447)
T 2dv6_A 305 --FGTS-----GEQ----EMDYEKL--INEKPEYFLFNGSVGSLT--------------------------------RSH 339 (447)
T ss_dssp --TTCC-----EEC----CBBHHHH--HTTCCSEEEETTSTTCCC--------------------------------CCC
T ss_pred --cccc-----ccc----cCChHHh--hccCCCEEEECCcccCCC--------------------------------CCc
Confidence 0000 000 0000000 011234689999876210 012
Q ss_pred EEEccCCcEEEEEEEcCC-CCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCC-ceeeEEeCCCCEEEEEEEccCcc
Q 009283 411 VMAADFRGFAEVVFENPE-DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTI-SRCTVQVYPKSWTAVYVPLDNVG 488 (538)
Q Consensus 411 ~~~~~~g~~v~~~l~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~-~rDTv~vp~~g~~~irf~adnpG 488 (538)
.+.++.|++++|+|.|.+ ...||||||||+|+||+.+++.. ..|. +|||+.|++++++.|+|++||||
T Consensus 340 ~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG~~~----------~~p~~~~dtv~l~pg~r~~i~~~~~~pG 409 (447)
T 2dv6_A 340 PLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSVV----------SPPLIGVQTVSVPPGGATIVDFKIDRAG 409 (447)
T ss_dssp CEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGGCSS----------SCCEEEESEEEECTTEEEEEEEECCSCE
T ss_pred ceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCCccc----------CCCcccccEEEECCCcEEEEEEECCCCE
Confidence 367788999999999987 46899999999999999975421 2344 79999999999999999999999
Q ss_pred eeeeeecchhhhhcceEEEEEEecCCC
Q 009283 489 MWNIRSENWARQYLGQQFYLRVYSSAN 515 (538)
Q Consensus 489 ~w~~HCHil~H~d~GMm~~~~V~~p~~ 515 (538)
.|+||||+++|++.|||+.+.|..+..
T Consensus 410 ~~~~hch~~~h~~~Gm~~~~~v~~~~~ 436 (447)
T 2dv6_A 410 RYILVDHALSRLEHGLVGFLNVDGPKN 436 (447)
T ss_dssp EEEEEESSGGGGGGTCCEEEEECSCSC
T ss_pred EEEEEecCcCccccCCEEEEEEeCCCC
Confidence 999999999999999999999975543
No 24
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=8.9e-50 Score=404.53 Aligned_cols=260 Identities=22% Similarity=0.302 Sum_probs=220.8
Q ss_pred ccCCCeEEEEEEEEEEEecC-CCeeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCC--CCceeeeccccCCCCCCCCCC
Q 009283 21 RGESPYRFFNWNVTYGDIYP-LGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALD--EPFLISWNGVQQRRNSWQDGV 97 (538)
Q Consensus 21 ~~~~~~~~~~l~~~~~~~~~-~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~--~~~siH~HG~~~~~~~~~DG~ 97 (538)
.+.+++++|+|++++..+++ +|..+.+|+|||++|||+|+|++||+|+|+|+|.++ .++++||||+. .+||+
T Consensus 33 ~~~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~-----~~dG~ 107 (327)
T 1kbv_A 33 RDYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT-----GQGGG 107 (327)
T ss_dssp CSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGG
T ss_pred cCCCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc-----cCCCC
Confidence 45567889999999999987 799999999999999999999999999999999997 58999999984 37887
Q ss_pred CCCCCCCCCCCeEEEEEEecCCccceeeecCc---hhhhhcceeeEEEEecCCCCCCCCCCCCCceEEEEeeecccChhh
Q 009283 98 YGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSL---AFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTD 174 (538)
Q Consensus 98 ~~tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~---~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~ 174 (538)
+. +..|.||++++|+|++ +++||||||||. +.|+.+||+|+|||++++.. +..|+|++++++||++.....
T Consensus 108 ~~-~~~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~~----p~~d~e~~l~~~d~~~~~~~~ 181 (327)
T 1kbv_A 108 AA-ATFTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGL----PKVDKEFYIVQGDFYTKGKKG 181 (327)
T ss_dssp TT-TTCBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC----CCCSEEEEEEEEEECBSSCTT
T ss_pred Cc-ceeecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCCC----CCCceEEEEEeeeeeccCccc
Confidence 75 2359999999999999 589999999995 68999999999999986532 235889999999999874210
Q ss_pred --------HHHHhccCCCCCCCCeEEEcCCCCCC---ceEEEecCCEEEEEEEecCCCceEEEEEeCCeeEEEEEcCeec
Q 009283 175 --------LKAILDSGSDLPFPDGLVINGRGSNA---NTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHT 243 (538)
Q Consensus 175 --------~~~~~~~~~~~~~~~~~liNG~~~~~---p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~ 243 (538)
..... ...++.++|||+.+.. +.++|++||+|||||+|+|..+.+.|||+||.|+||+.||.++
T Consensus 182 ~~g~~~~~~~~~~-----~~~~~~~~iNG~~~~~~~~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~DG~~~ 256 (327)
T 1kbv_A 182 AQGLQPFDMDKAV-----AEQPEYVVFNGHVGALTGDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKL 256 (327)
T ss_dssp CCEEECBCHHHHH-----HTCCSEEEETTSTTTTSGGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSC
T ss_pred cccccccChhHhc-----cCCCceEEEcCcccCCCCceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcCCCcC
Confidence 11111 1356899999998532 5799999999999999999988999999999999999999999
Q ss_pred ccceecEEEEcCCCeEEEEEEeCCCCcceEEEEEeeccCCccceEEEEEecCCC
Q 009283 244 LQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSA 297 (538)
Q Consensus 244 ~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~ 297 (538)
+|..++++.|+||||+||+|+++ .+|.|+|+++...........|+++|.+..
T Consensus 257 ~p~~~d~l~l~pGer~dv~v~~~-~pG~y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 257 INENVQSTIVPAGGSAIVEFKVD-IPGNYTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp EECSBSEEEECTTEEEEEEEEEC-SCEEEEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred CCCceeEEEECCCCEEEEEEEeC-CCeEEEEEeccccccccCCcEEEEEECCCC
Confidence 99999999999999999999999 589999999765431123568999998764
No 25
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=8.5e-50 Score=402.01 Aligned_cols=248 Identities=19% Similarity=0.185 Sum_probs=197.3
Q ss_pred cccCCCeEEEEEEEEEEEecCCCee-eEEEEEcCcCcCceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCC
Q 009283 20 TRGESPYRFFNWNVTYGDIYPLGVK-QQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVY 98 (538)
Q Consensus 20 ~~~~~~~~~~~l~~~~~~~~~~G~~-~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~ 98 (538)
+.+.+.+++++|.++ ..++|.. ..++.+||++|||+||+++||+|+|+|+|+|++++||||||+++. +.+||++
T Consensus 7 ~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~--~~~dG~~ 81 (313)
T 3tas_A 7 APAGGEVKRIKLYAE---RLGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYE--ISSDGTK 81 (313)
T ss_dssp CCCCCCEEEEEEEEE---ECGGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCST
T ss_pred CCCCceEEEEEEEEE---EcCCCceeeeeecCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCC--ccCCCCc
Confidence 445557788888764 3456643 556788999999999999999999999999999999999999875 4699999
Q ss_pred CCCCCCCCCCeEEEEEEec------------CCccceeeecCch------hhhhcceeeEEEEecCCCCCCCCCCCCCce
Q 009283 99 GTNCPIPPGKNFTYVLQVK------------DQIGSYFYFPSLA------FHKAAGGYGGIKIASRPLIPVPFDPPAGDF 160 (538)
Q Consensus 99 ~tq~~i~pG~~~~Y~f~~~------------~~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~ 160 (538)
.+||+|.||++|+|+|++. +++||||||||.. .|+.+||+|+|||+++.. . ..|+|+
T Consensus 82 ~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~--~---~~d~e~ 156 (313)
T 3tas_A 82 QSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD--V---LPDRTH 156 (313)
T ss_dssp TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC--B---CCSEEE
T ss_pred cccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeecccc--c---cccccc
Confidence 9999999999999999863 3579999999963 458899999999998763 2 237888
Q ss_pred EEEEeeecccChhhHHHHhccCCCCCCCCeEEEcCCCCCCceEEEecCCEEEEEEEecCCCceEEEEEeCCeeEEEEEcC
Q 009283 161 TILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEG 240 (538)
Q Consensus 161 ~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG 240 (538)
+|+++||+ +||+.
T Consensus 157 ~l~~~d~t------------------------~Ng~~------------------------------------------- 169 (313)
T 3tas_A 157 TIVFNDMT------------------------INNRP------------------------------------------- 169 (313)
T ss_dssp EEEEETTE------------------------ETTCC-------------------------------------------
T ss_pred eeeccchh------------------------cccCC-------------------------------------------
Confidence 88876641 11110
Q ss_pred eecccceecEEEEcCCCeEEEEEEeCCCCcceEEEEEeeccCCccceEEEEEecCCCCCCCCCCCCCCCccccchhhhhh
Q 009283 241 THTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQAR 320 (538)
Q Consensus 241 ~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~P~~~~~~~~~~~~ 320 (538)
.+..|
T Consensus 170 ---------------------------------------------------------------~~~~~------------ 174 (313)
T 3tas_A 170 ---------------------------------------------------------------AHTGP------------ 174 (313)
T ss_dssp ---------------------------------------------------------------TTCCC------------
T ss_pred ---------------------------------------------------------------ccccc------------
Confidence 00000
Q ss_pred hhcccCCCCCCCCCCCCCCCccccccceEEEEecccCCCCCeEeEEECCeeecCCCCchhhhcccCCCCccccCCCCCCC
Q 009283 321 SLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNP 400 (538)
Q Consensus 321 ~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~P~l~~~~~~~~g~~~~~~~~~~p 400 (538)
T Consensus 175 -------------------------------------------------------------------------------- 174 (313)
T 3tas_A 175 -------------------------------------------------------------------------------- 174 (313)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCcceeeEEEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEE
Q 009283 401 TGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAV 480 (538)
Q Consensus 401 ~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~i 480 (538)
.+.++.|++|+|+|.|.+.+.||||||||.|+|+..+.... ....+.++||+.|.|++.+.+
T Consensus 175 ----------~l~v~~Ge~vr~~liN~g~~~hpfHlHGh~F~v~~~~~~~~--------~~~~~~~~Dtv~l~Pger~~v 236 (313)
T 3tas_A 175 ----------DFEATVGDRVEFVMITHGEYYHTFHLHGHRWADNRTGMLTG--------PDDPSQVIDNKICGPADSFGF 236 (313)
T ss_dssp ----------CEEEETTCEEEEEEEEESSCCEEEEETTCCEESSTTSSCCS--------TTCCCCEESEEEECTTCEEEE
T ss_pred ----------ccccccCCEEEEEEecccccceeeeecCCeeEEEEECCccC--------CCCCCeeeeEEEeCCCcceEE
Confidence 01123588899999999988999999999999998764321 123468999999999999888
Q ss_pred EEEc---cCcceeeeeecchhhhhcceEEEEEEecCCCcC
Q 009283 481 YVPL---DNVGMWNIRSENWARQYLGQQFYLRVYSSANSW 517 (538)
Q Consensus 481 rf~a---dnpG~w~~HCHil~H~d~GMm~~~~V~~p~~~~ 517 (538)
++.+ +|||.|+||||+++|++.|||+.|.|.++++.+
T Consensus 237 ~v~a~~~~nPG~w~~HCHi~~H~~~GM~~~f~V~~~d~~~ 276 (313)
T 3tas_A 237 QVIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTI 276 (313)
T ss_dssp EEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTCCC
T ss_pred EEEeccCCCCEeEEEEeCChHHHHCCCeEEEEEECCCCCC
Confidence 7764 689999999999999999999999999988653
No 26
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=6.7e-50 Score=399.68 Aligned_cols=137 Identities=20% Similarity=0.238 Sum_probs=110.2
Q ss_pred ccCCCeEEEEEEEEEEEecCCCeeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCCC
Q 009283 21 RGESPYRFFNWNVTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGT 100 (538)
Q Consensus 21 ~~~~~~~~~~l~~~~~~~~~~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~t 100 (538)
.+.+.+|+|+|.++...-.. ....++.+||++|||+|||++||+|+|+|+|+|++++||||||+++. +.+||++.+
T Consensus 24 ~~~~~~~~~~~~a~~~~~~~--~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~--~~~DG~~~~ 99 (299)
T 3t9w_A 24 RAQGTTRRITMYAEKISDEL--YGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYD--VNSDGTLMN 99 (299)
T ss_dssp ---CCEEEEEEEEEEEETTE--EEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCTTT
T ss_pred ccCCCEEEEEEEEEecCCCc--eeeeecCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccC--CccCCCccc
Confidence 55677899999988654221 33455667999999999999999999999999999999999999774 579999889
Q ss_pred CCCCCCCCeEEEEEEec------------CCccceeeecCch------hhhhcceeeEEEEecCCCCCCCCCCCCCceEE
Q 009283 101 NCPIPPGKNFTYVLQVK------------DQIGSYFYFPSLA------FHKAAGGYGGIKIASRPLIPVPFDPPAGDFTI 162 (538)
Q Consensus 101 q~~i~pG~~~~Y~f~~~------------~~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l 162 (538)
||+|.||++|+|+|+++ +++||||||||.. .|+.+||+|+|||+++.. . ..|+|+++
T Consensus 100 ~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~--~---~~d~e~~l 174 (299)
T 3t9w_A 100 GSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGD--L---LPKRQFTV 174 (299)
T ss_dssp TCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC--C---CCSEEEEE
T ss_pred cCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEecccc--c---Ccccccee
Confidence 99999999999999984 2579999999953 478899999999998653 1 22566666
Q ss_pred EEee
Q 009283 163 LAGD 166 (538)
Q Consensus 163 ~l~d 166 (538)
++++
T Consensus 175 ~~~~ 178 (299)
T 3t9w_A 175 VFND 178 (299)
T ss_dssp EEET
T ss_pred eeee
Confidence 5543
No 27
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=6.1e-48 Score=384.16 Aligned_cols=232 Identities=24% Similarity=0.314 Sum_probs=204.8
Q ss_pred CeEEEEEEEEEEEecCC-CeeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCC-CCC
Q 009283 25 PYRFFNWNVTYGDIYPL-GVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYG-TNC 102 (538)
Q Consensus 25 ~~~~~~l~~~~~~~~~~-G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-tq~ 102 (538)
.+++|+|++++..+++. |..+.+|+|||++|||+|++++||+|+|+|+|.++++++|||||++ .+++||+|+ +|+
T Consensus 33 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~---~~~~DG~p~~~~~ 109 (288)
T 3gdc_A 33 TLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVH---RATMDGTPGIGAG 109 (288)
T ss_dssp EEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCC---CGGGSCCTTSTTC
T ss_pred cEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEecccc---ccccCCCCCccce
Confidence 35889999999988764 9999999999999999999999999999999999999999999996 357999999 999
Q ss_pred CCCCCCeEEEEEEecCCccceeeecCch---hhhhcceeeEEEEecCCCCCCCCCCCCCceEEEEeeecccChhhHHHHh
Q 009283 103 PIPPGKNFTYVLQVKDQIGSYFYFPSLA---FHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAIL 179 (538)
Q Consensus 103 ~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~---~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~ 179 (538)
+|.||++++|+|++ +++||||||||.. .|+.+||+|+|||++++..+ ..++|++|+++||+.+.
T Consensus 110 ~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~~----~~d~e~~l~~~d~~~~~-------- 176 (288)
T 3gdc_A 110 SIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRP----PADDEMVMVMNGYNTDG-------- 176 (288)
T ss_dssp SBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCCC----CCSEEEEEEEEEECCSS--------
T ss_pred eECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeCCccCC----CCcceEEEEEeeEecCC--------
Confidence 99999999999999 5899999999986 79999999999999876432 23789999999998752
Q ss_pred ccCCCCCCCCeEEEcCCCCC--CceEEEecCCEEEEEEEecCCCc-eEEEEEeCCeeEEEEEcCeec-ccceecEEEEcC
Q 009283 180 DSGSDLPFPDGLVINGRGSN--ANTFTVDQGKTYRFRISNVGIST-SINFRIQGHKMLLVEVEGTHT-LQNTYDSLDIHL 255 (538)
Q Consensus 180 ~~~~~~~~~~~~liNG~~~~--~p~~~v~~G~~~rlRliN~~~~~-~~~~~l~gh~~~via~DG~~~-~p~~~~~v~l~p 255 (538)
...++.++|||+.+. .+.++++.|++|||||+|++... .|.|||+||.|+|++ +|..+ .|...|++.|.|
T Consensus 177 -----g~~~~~~~iNG~~~~~~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~-~g~~~~~~~~~Dtv~v~p 250 (288)
T 3gdc_A 177 -----GDDNEFYSVNGLPFHFMDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYP-TGTMLTPSEYTDTISQVQ 250 (288)
T ss_dssp -----TTCCSEEEETTSTTHHHHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEE-TTCCSSCSEEESEEEEET
T ss_pred -----CCCcceEEECcccccccCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEc-CCCccCCCceeeEEEeCC
Confidence 124678999999852 24799999999999999999654 799999999999987 55444 468899999999
Q ss_pred CCeEEEEEEeCCCCcceEEEEEee
Q 009283 256 GQSYSVLVRADQPPQGYYIVISTR 279 (538)
Q Consensus 256 geR~dv~v~~~~~~g~y~i~~~~~ 279 (538)
|||++|+++++ .||.|.+.++..
T Consensus 251 g~~~~v~~~~~-~pG~~~~hCH~~ 273 (288)
T 3gdc_A 251 GQRGILELRFP-YPGKFMFHAHKT 273 (288)
T ss_dssp TCEEEEEECCC-SCEEEEEECSSH
T ss_pred CceEEEEEECC-CCEEEEEEecCh
Confidence 99999999999 899999998753
No 28
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=3.3e-48 Score=446.79 Aligned_cols=385 Identities=11% Similarity=0.072 Sum_probs=260.5
Q ss_pred eeeEEEEEcCcCcC--ceEEEecCCEEEEEEEeCCCCCceeeeccccCCC-CCCCCCCCC-CCCCCCCCCeEEEEEEecC
Q 009283 43 VKQQGILINGQFPG--PSIEAVTNDNLIISVFNALDEPFLISWNGVQQRR-NSWQDGVYG-TNCPIPPGKNFTYVLQVKD 118 (538)
Q Consensus 43 ~~~~~~~~Ng~~pg--P~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~-~~~~DG~~~-tq~~i~pG~~~~Y~f~~~~ 118 (538)
..+.+.++||++|| |+|++++||+|+++|.|. .+.+||||+++.+ +.++||++. | |+|.||.+++|+|++ +
T Consensus 616 ~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~---g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~-~ 690 (1065)
T 2j5w_A 616 ESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA---GNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWP-D 690 (1065)
T ss_dssp HHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC---CSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECC-C
T ss_pred ccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC---CCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEec-C
Confidence 56899999999999 889999999999999976 5569999999988 899999998 7 999999999999999 5
Q ss_pred CccceeeecCchhhhhcceeeEEEEecCCCCCCCCCCCCCceEEEE----eeecccChhhHHHHh--ccCCC--------
Q 009283 119 QIGSYFYFPSLAFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILA----GDWYKKNHTDLKAIL--DSGSD-------- 184 (538)
Q Consensus 119 ~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l----~d~~~~~~~~~~~~~--~~~~~-------- 184 (538)
++||||||||.+.|+.+||.|.++|++......+...++.|.++++ .||++.....+...+ ..+..
T Consensus 691 ~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~~p~~~~~n~ 770 (1065)
T 2j5w_A 691 TEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQNVSNAFLDK 770 (1065)
T ss_dssp SCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTCCCCCTTTCC
T ss_pred CCeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCccCccceeecC
Confidence 8999999999999999999999999987543333235678889999 899998655432211 00100
Q ss_pred --CCCCC------eEEEcCCCC---------------CCceEEEecCCEEEEEEEecCCCceEEEEEeCCeeEEEEEcCe
Q 009283 185 --LPFPD------GLVINGRGS---------------NANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGT 241 (538)
Q Consensus 185 --~~~~~------~~liNG~~~---------------~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~ 241 (538)
...+. ++.+.+..+ ..|.|++++|+++++|+.|.... .+.++.+|. .+... |
T Consensus 771 ~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~~~-~~sih~HGl--~~~~~-~- 845 (1065)
T 2j5w_A 771 GEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMATR-PYSIHAHGV--QTESS-T- 845 (1065)
T ss_dssp TTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSSS-CBCCEESSC--BCSCS-C-
T ss_pred CCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCCCC-CceEeeccc--cccCC-C-
Confidence 00010 112222111 24899999999999999999654 677777664 33222 1
Q ss_pred ecccceecEEEEcCCCeEEEEEEeCCC---------CcceEEEEEeeccCC-ccceEEEEEecCCCCCCCCCCCCCCCcc
Q 009283 242 HTLQNTYDSLDIHLGQSYSVLVRADQP---------PQGYYIVISTRFTSQ-VLSATSVLHYSNSAGSVSGPPPGGPTTQ 311 (538)
Q Consensus 242 ~~~p~~~~~v~l~pgeR~dv~v~~~~~---------~g~y~i~~~~~~~~~-~~~~~ail~y~~~~~~~~~~~p~~P~~~ 311 (538)
...+.||++++..+.+.+. +|.||++.+.....+ .....+.|.+....... ....| .+
T Consensus 846 --------~~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~~~q~~~GL~G~liV~~~~~l~---~~~~~-~d 913 (1065)
T 2j5w_A 846 --------VTPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRRPYLK---VFNPR-RK 913 (1065)
T ss_dssp --------CCCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTHHHHHHTTCEEEEEEECCC--------CCC-CE
T ss_pred --------CceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCChHHhhhccccceeEecCccccc---ccCCC-cc
Confidence 1256899998888887642 258998876432111 11223334443322100 00111 11
Q ss_pred ccchhhh--hh-hhcc----cCCCCCCCCCCCCCCCccccccceEEEEecccCCCCCeEeEEECCeeecCCCCchhhhcc
Q 009283 312 IDWSLEQ--AR-SLRR----NLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADY 384 (538)
Q Consensus 312 ~~~~~~~--~~-~~~~----~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~P~l~~~~ 384 (538)
.+..+.. .. ...+ +..... +.|.. ... ... .+. .....|.|||..|..
T Consensus 914 ~D~~l~~~~~d~~~~~y~~~n~~~~~--~~P~~-v~~--~~~----~~~------~~~~~~~iNG~~~~~---------- 968 (1065)
T 2j5w_A 914 LEFALLFLVFDENESWYLDDNIKTYS--DHPEK-VNK--DDE----EFI------ESNKMHAINGRMFGN---------- 968 (1065)
T ss_dssp EEEEEEEEEEEGGGSTTHHHHHHHHC--SCGGG-CCT--TCH----HHH------HHTEEEEETTBCTTC----------
T ss_pred eEEEEEEEeecCCcceeeccCccccc--CCccc-cCc--chh----hhh------ccCceEEECCccCCC----------
Confidence 1111000 00 0000 000000 00000 000 000 000 012358889887631
Q ss_pred cCCCCccccCCCCCCCCCCCcceeeEEEEccCCcEEEEEEEcCC--CCCCCccccCCCceEEeecCCCCCCCCCCCcCCC
Q 009283 385 FKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPE--DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLR 462 (538)
Q Consensus 385 ~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~l~N~~--~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~ 462 (538)
...+.++.|++|+|+|.|.+ .+.||||||||.|+|++++
T Consensus 969 ------------------------~~~~~v~~G~~vr~~l~N~g~~~~~HpfHlHG~~F~vv~~~--------------- 1009 (1065)
T 2j5w_A 969 ------------------------LQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRG--------------- 1009 (1065)
T ss_dssp ------------------------CCCCEEETTCEEEEEEEECCSTTCCEEEEESSCCEEETTTT---------------
T ss_pred ------------------------CccEEeCCCCEEEEEEEeCCCCCcceeEEEcccEEEEEecC---------------
Confidence 11246788999999999985 4689999999999999763
Q ss_pred CCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhhhhcceEEEEEEecCC
Q 009283 463 DTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSA 514 (538)
Q Consensus 463 ~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~p~ 514 (538)
|.||||+.|+|+++++|+|++||||.|+||||+++|++.|||+.|+|.+.+
T Consensus 1010 -p~~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V~~~~ 1060 (1065)
T 2j5w_A 1010 -VYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNE 1060 (1065)
T ss_dssp -CEEESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEEECCC
T ss_pred -CceeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEEecCc
Confidence 579999999999999999999999999999999999999999999998654
No 29
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=1e-46 Score=383.63 Aligned_cols=243 Identities=19% Similarity=0.194 Sum_probs=193.0
Q ss_pred CCCeEEEEEEEEEEEecCCCeee-EEEEEcCcCcCceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCCCC
Q 009283 23 ESPYRFFNWNVTYGDIYPLGVKQ-QGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTN 101 (538)
Q Consensus 23 ~~~~~~~~l~~~~~~~~~~G~~~-~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~tq 101 (538)
.+.+++|+|++++. ++|... ..+.+||++|||+|+|++||+|+|+|+|.++++++|||||+.+. .++||++.+|
T Consensus 45 ~g~~~~~~l~~~~~---~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~--~~~DG~~~t~ 119 (343)
T 3cg8_A 45 GGEVRHLKMYAEKL---ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTAMNK 119 (343)
T ss_dssp CCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCTTTT
T ss_pred CCeEEEEEEEEEEc---cCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccC--CcCCCccccc
Confidence 34678999999875 345321 12234899999999999999999999999999999999999876 5799999889
Q ss_pred CCCCCCCeEEEEEEecC------------CccceeeecCc------hhhhhcceeeEEEEecCCCCCCCCCCCCCceEEE
Q 009283 102 CPIPPGKNFTYVLQVKD------------QIGSYFYFPSL------AFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTIL 163 (538)
Q Consensus 102 ~~i~pG~~~~Y~f~~~~------------~~Gt~wYH~H~------~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~ 163 (538)
|+|.||++++|+|++.+ ++||||||||. ..|+.+||+|+|||+++... . .|+|++++
T Consensus 120 ~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~--~---pd~e~~l~ 194 (343)
T 3cg8_A 120 SDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV--L---PDATHTIV 194 (343)
T ss_dssp CSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC--C---CSEEEEEE
T ss_pred ccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCC--C---CCceEEEE
Confidence 99999999999999842 35999999996 47899999999999987532 1 35677776
Q ss_pred EeeecccChhhHHHHhccCCCCCCCCeEEEcCCCCCCceEEEecCCEEEEEEEecCCCceEEEEEeCCeeEEEEEcCeec
Q 009283 164 AGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHT 243 (538)
Q Consensus 164 l~d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~ 243 (538)
++|| +|||+.
T Consensus 195 ~~d~------------------------~iNG~~---------------------------------------------- 204 (343)
T 3cg8_A 195 FNDM------------------------TINNRK---------------------------------------------- 204 (343)
T ss_dssp EETT------------------------EETTCC----------------------------------------------
T ss_pred cccc------------------------eecccC----------------------------------------------
Confidence 6543 455543
Q ss_pred ccceecEEEEcCCCeEEEEEEeCCCCcceEEEEEeeccCCccceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhc
Q 009283 244 LQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLR 323 (538)
Q Consensus 244 ~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~P~~~~~~~~~~~~~~~ 323 (538)
+ +..
T Consensus 205 -------------------------------------------------~-----------~~~---------------- 208 (343)
T 3cg8_A 205 -------------------------------------------------P-----------HTG---------------- 208 (343)
T ss_dssp -------------------------------------------------T-----------TCC----------------
T ss_pred -------------------------------------------------C-----------CCC----------------
Confidence 0 000
Q ss_pred ccCCCCCCCCCCCCCCCccccccceEEEEecccCCCCCeEeEEECCeeecCCCCchhhhcccCCCCccccCCCCCCCCCC
Q 009283 324 RNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGG 403 (538)
Q Consensus 324 ~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~P~l~~~~~~~~g~~~~~~~~~~p~~~ 403 (538)
T Consensus 209 -------------------------------------------------------------------------------- 208 (343)
T 3cg8_A 209 -------------------------------------------------------------------------------- 208 (343)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcceeeEEEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEE
Q 009283 404 GAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVP 483 (538)
Q Consensus 404 ~~~~~~~~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ 483 (538)
..+.++.|++|+|+|.|.+.+.||||||||.|+|+.. |.+.. ....+.|+||+.|+|++++.++|+
T Consensus 209 ------~~l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f~v~~~--G~~~~------p~~~~~~~Dtv~v~PG~~~~v~~~ 274 (343)
T 3cg8_A 209 ------PDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADNRT--GILTG------PDDPSRVIDNKITGPADSFGFQII 274 (343)
T ss_dssp ------CCEEEETTCEEEEEEEEESSCCEEEEETTCCEESSSS--SSCCS------TTCCCCEESEEEECTTCEEEEEEE
T ss_pred ------ccEEeCCCCEEEEEEEcCCccccccEecCcEEEEecc--CcccC------CCCcccceeeEEeCCCCEEEEEEE
Confidence 0023456999999999998889999999999999753 32221 112357999999999999999999
Q ss_pred c---cCcceeeeeecchhhhhcceEEEEEEecCCC
Q 009283 484 L---DNVGMWNIRSENWARQYLGQQFYLRVYSSAN 515 (538)
Q Consensus 484 a---dnpG~w~~HCHil~H~d~GMm~~~~V~~p~~ 515 (538)
+ ||||.|+||||+++|++.|||..|.|.+++.
T Consensus 275 ~~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~~ 309 (343)
T 3cg8_A 275 AGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 309 (343)
T ss_dssp TTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred ECCCCCCeeEEEeCCCHHHHhccCcEEEEEecCCC
Confidence 5 8999999999999999999999999987653
No 30
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=2.7e-46 Score=395.46 Aligned_cols=267 Identities=22% Similarity=0.258 Sum_probs=222.3
Q ss_pred cccCCCeEEEEEEEEEEEecC-CCeeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCC--CCceeeeccccCCCCCCCCC
Q 009283 20 TRGESPYRFFNWNVTYGDIYP-LGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALD--EPFLISWNGVQQRRNSWQDG 96 (538)
Q Consensus 20 ~~~~~~~~~~~l~~~~~~~~~-~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~--~~~siH~HG~~~~~~~~~DG 96 (538)
..+.+.+++|+|++++..+++ +|..+.+|+|||++|||+|++++||+|+|+|+|.++ .++++||||+.+ +||
T Consensus 22 ~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG 96 (442)
T 2zoo_A 22 NRDHSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGG 96 (442)
T ss_dssp CCSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGG
T ss_pred ccCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCC
Confidence 356677899999999999984 899999999999999999999999999999999986 499999999863 688
Q ss_pred CCCCCCCCCCCCeEEEEEEecCCccceeeecC---chhhhhcceeeEEEEecCCCCCCCCCCCCCceEEEEeeecccChh
Q 009283 97 VYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPS---LAFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHT 173 (538)
Q Consensus 97 ~~~tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H---~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~ 173 (538)
++.+ .+|.||++++|+|++ +++|||||||| ...|+.+||+|+|||++++.. +.+|+|++|+++||++....
T Consensus 97 ~~~~-~~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~----~~~d~e~~l~l~d~~~~~~~ 170 (442)
T 2zoo_A 97 GAES-SFTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGL----APVDREYYLVQGDFYTKGEF 170 (442)
T ss_dssp GGGG-CCBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC----CCCSEEEEEEEEEECBSSCT
T ss_pred CCcc-EEECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCCC----CCCCceEEEEeeeeeccCcc
Confidence 7752 269999999999999 58999999996 568999999999999986532 13489999999999987531
Q ss_pred h-HH-HHhc-cCCCCCCCCeEEEcCCCCCC---ceEEEecCCEEEEEEEecCCCceEEEEEeCCeeEEEEEcCeecccce
Q 009283 174 D-LK-AILD-SGSDLPFPDGLVINGRGSNA---NTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNT 247 (538)
Q Consensus 174 ~-~~-~~~~-~~~~~~~~~~~liNG~~~~~---p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~ 247 (538)
. .. ...+ .......++.++|||+.+.. +.+++++|++|||||+|+|..+.+.|+|+||.|+||+.||.+++|..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG~~~~p~~ 250 (442)
T 2zoo_A 171 GEAGLQPFDMAKAIDEDADYVVFNGSVGSTTDENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSLKNHN 250 (442)
T ss_dssp TCCEEECBCHHHHHTTCCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSCEECS
T ss_pred cccccccCChhHhccCCCCEEEECCCcCCCCCCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCCccCCCcc
Confidence 0 00 0000 00012467899999998532 68999999999999999998889999999999999999999999999
Q ss_pred ecEEEEcCCCeEEEEEEeCCCCcceEEEEEeeccCCccceEEEEEecCCCC
Q 009283 248 YDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSAG 298 (538)
Q Consensus 248 ~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~ 298 (538)
++++.|.||||+||+|+++ .+|.|+++++...........++++|.+...
T Consensus 251 ~~~~~l~pg~r~~v~v~~~-~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 251 VQTTLIPAGGAAIVEFKVE-VPGTFILVDHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp BSEEEECTTEEEEEEEECC-SCEEEEEEESSTHHHHTTSCEEEEEEESCCC
T ss_pred ceEEEECCCeeEEEEEEcC-CCCeEEEEecccccccccCceEEEEecCCCC
Confidence 9999999999999999999 6899999997643311235689999987653
No 31
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=2.4e-45 Score=373.67 Aligned_cols=267 Identities=18% Similarity=0.208 Sum_probs=209.6
Q ss_pred cccCCCeEEEEEEEEEEEecC-CCeeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCC
Q 009283 20 TRGESPYRFFNWNVTYGDIYP-LGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVY 98 (538)
Q Consensus 20 ~~~~~~~~~~~l~~~~~~~~~-~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~ 98 (538)
..+.+.+++|+|++++..+++ +|..+.+|+|||++|||+|++++||+|+|+|+|. .+++||||++++.....||.+
T Consensus 26 ~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~ 102 (333)
T 1mzy_A 26 AASGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGG 102 (333)
T ss_dssp CSSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGG
T ss_pred cCCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCC
Confidence 355567899999999999987 5999999999999999999999999999999999 689999999887654455555
Q ss_pred C-CCCCCCCCCeEEEEEEecCCccceeeecCch-----hhhhcceeeEEEEecCCCCC----CCCCCCCCceEEEEeeec
Q 009283 99 G-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLA-----FHKAAGGYGGIKIASRPLIP----VPFDPPAGDFTILAGDWY 168 (538)
Q Consensus 99 ~-tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~-----~q~~~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~l~d~~ 168 (538)
. + .|.||++++|+|++ +++||||||||.. .|+.+||+|+|||++++..+ .++ .+|+|++|+++||+
T Consensus 103 ~~~--~i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~ 178 (333)
T 1mzy_A 103 GLT--LINPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPV-RYDTVYYIGESDHY 178 (333)
T ss_dssp GGC--CBCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEEC
T ss_pred cee--EeCCCCEEEEEEEC-CCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCC-ccchheeeeeeeec
Confidence 4 5 49999999999999 5899999999975 69999999999999765321 122 44889999999999
Q ss_pred cc--ChhhHH----------HHhccCCCCCCCCeEEEcCCCCC---CceEEEecCCEEEEEEEecCCCceEEEEEeCCee
Q 009283 169 KK--NHTDLK----------AILDSGSDLPFPDGLVINGRGSN---ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKM 233 (538)
Q Consensus 169 ~~--~~~~~~----------~~~~~~~~~~~~~~~liNG~~~~---~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~ 233 (538)
+. .++.+. ..+.. .....++.++|||+.+. .+.++|++||+||||++|++....+ ..+++|.+
T Consensus 179 ~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ING~~~~~~~~~~l~v~~Ger~Rl~n~~~~~~~~~-h~i~~h~~ 256 (333)
T 1mzy_A 179 IPKDEDGTYMRFSDPSEGYEDMVAV-MDTLIPSHIVFNGAVGALTGEGALKAKVGDNVLFVHSQPNRDSRP-HLIGGHGD 256 (333)
T ss_dssp CCBCTTSCBCCCSSHHHHHHHHHHH-HTTTCCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCE-EEETCCEE
T ss_pred cCccccccccccccccccccchhHH-hhccCCcEEEECCcccccCCCcceEecCCCEEEEEECCCCCcccc-EEECCCCe
Confidence 83 211110 00000 01246789999999842 3679999999888877665543222 23788999
Q ss_pred EEEEEcCeeccc-c-eecEEEEcCCCeEEEEEEeCCCCcceEEEEEeeccCCccceEEEEEecCCC
Q 009283 234 LLVEVEGTHTLQ-N-TYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSA 297 (538)
Q Consensus 234 ~via~DG~~~~p-~-~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~ 297 (538)
+|++ ||.++++ . .++++.|+||||+||+|+++ .+|+|+++++...........++++|.+..
T Consensus 257 ~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~-~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 257 LVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFL-QPGVYAYVNHNLIEAVHKGATAHVLVEGEW 320 (333)
T ss_dssp EEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECC-SCEEEEEEESSHHHHHTTCCEEEEEEESCC
T ss_pred EEEe-CCcccCCCccCcceEEECCCceEEEEEEcC-CCEEEEEecChhhhHhhCCCEEEEEEcCCC
Confidence 9999 9999874 3 48999999999999999999 589999999875321124567899998754
No 32
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=3.8e-45 Score=372.81 Aligned_cols=264 Identities=19% Similarity=0.238 Sum_probs=205.4
Q ss_pred cCCCeEEEEEEEEEEEec--CCCeeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCC
Q 009283 22 GESPYRFFNWNVTYGDIY--PLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYG 99 (538)
Q Consensus 22 ~~~~~~~~~l~~~~~~~~--~~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~ 99 (538)
+.+++++|+|++++..++ +||..+.+|+|||++|||+|+|++||+|+|+|+|.+. ++||||+++++...+||.+.
T Consensus 28 ~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~---~~~~h~~~~h~~~~~~~~~~ 104 (336)
T 1oe1_A 28 SGPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT---NAMPHNVDFHGATGALGGAK 104 (336)
T ss_dssp CCCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTT---CCSCBCCEETTSCSGGGGGG
T ss_pred CCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCCC---CCccccceECCCCCCCCCcc
Confidence 455778999999999875 5699999999999999999999999999999999963 45666666655445666655
Q ss_pred -CCCCCCCCCeEEEEEEecCCccceeeecCc----hhhhhcceeeEEEEecCCCCC----CCCCCCCCceEEEEeeeccc
Q 009283 100 -TNCPIPPGKNFTYVLQVKDQIGSYFYFPSL----AFHKAAGGYGGIKIASRPLIP----VPFDPPAGDFTILAGDWYKK 170 (538)
Q Consensus 100 -tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~l~d~~~~ 170 (538)
++ |.||++++|+|++ +++||||||||. +.|+.+||+|+|||++++..+ .+. .+|+|++|+++||++.
T Consensus 105 ~~~--i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~-~~D~e~~l~~~D~~~~ 180 (336)
T 1oe1_A 105 LTN--VNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPL-HYDRAYTIGEFDLYIP 180 (336)
T ss_dssp GCC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEECCC
T ss_pred eEE--eCCCCEEEEEEEC-CCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcc-cCCceeEeeeeeeeec
Confidence 54 9999999999999 589999999996 479999999999999865321 122 4588999999999984
Q ss_pred C--hhhHH----------HHhccCCCCCCCCeEEEcCCCCC---CceEEEecCCEEEEEEEecCCCceEEEE-EeCCeeE
Q 009283 171 N--HTDLK----------AILDSGSDLPFPDGLVINGRGSN---ANTFTVDQGKTYRFRISNVGISTSINFR-IQGHKML 234 (538)
Q Consensus 171 ~--~~~~~----------~~~~~~~~~~~~~~~liNG~~~~---~p~~~v~~G~~~rlRliN~~~~~~~~~~-l~gh~~~ 234 (538)
. .+.+. ..+.. .....++.++|||+.+. .+.++|++||+||| +|++..+.+.++ +++|.|+
T Consensus 181 ~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~liNG~~~~~~~~~~l~v~~GervRl--in~~~~~~~~~~~i~gh~~~ 257 (336)
T 1oe1_A 181 KGPDGKYKDYATLAESYGDTVQV-MRTLTPSHIVFNGKVGALTGANALTAKVGETVLL--IHSQANRDTRPHLIGGHGDW 257 (336)
T ss_dssp BCTTSSBCCCSSTGGGHHHHHHH-HHTTCCSEEEETTSTTTTSGGGCEEEETTCEEEE--EEEESSSCBCEEETTCCEEE
T ss_pred cccCCceeecccccccccchhhH-hhcCCCCEEEECCeeccCCCCcceEcCCCCEEEE--EecCCCCccceEEECCcCce
Confidence 2 11111 00000 01246789999999853 38899999997765 666666555555 5999999
Q ss_pred EEEEcCeecccc--eecEEEEcCCCeEEEEEEeCCCCcceEEEEEeeccCCccceEEEEEecCCC
Q 009283 235 LVEVEGTHTLQN--TYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSA 297 (538)
Q Consensus 235 via~DG~~~~p~--~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~ 297 (538)
|++ ||.+++|. .++++.|+||||+||+|+++ .+|.|+++++...........|+++|.+..
T Consensus 258 Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~-~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~ 320 (336)
T 1oe1_A 258 VWE-TGKFANPPQRDLETWFIRGGSAGAALYTFK-QPGVYAYLNHNLIEAFELGAAGHIKVEGKW 320 (336)
T ss_dssp EET-TCCTTSCCEEEESBCCBCTTEEEEEEEECC-SCEEEEEEESSHHHHHTTSCEEEEEEESCC
T ss_pred EeC-CCcCcCCccccceEEEECCCCcEEEEEEcC-CCceEEEEechhhccccCCCeEEEEECCCC
Confidence 997 99999864 36899999999999999999 589999999864321123567899998765
No 33
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=6.6e-45 Score=371.64 Aligned_cols=266 Identities=17% Similarity=0.195 Sum_probs=206.1
Q ss_pred ccCCCeEEEEEEEEEEEecC--CCeeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCC
Q 009283 21 RGESPYRFFNWNVTYGDIYP--LGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVY 98 (538)
Q Consensus 21 ~~~~~~~~~~l~~~~~~~~~--~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~ 98 (538)
.+.+++++|+|++++..+++ ||..+.+|+|||++|||+|+|++||+|+|+|+|.+ +++||||+++++....||..
T Consensus 33 ~~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~~ 109 (340)
T 2bw4_A 33 KTGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGGG 109 (340)
T ss_dssp SSSCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGG
T ss_pred cCCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCCc
Confidence 45667899999999998874 59999999999999999999999999999999998 78999999877644344433
Q ss_pred C-CCCCCCCCCeEEEEEEecCCccceeeecCch----hhhhcceeeEEEEecCCCCC----CCCCCCCCceEEEEeeecc
Q 009283 99 G-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLA----FHKAAGGYGGIKIASRPLIP----VPFDPPAGDFTILAGDWYK 169 (538)
Q Consensus 99 ~-tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~l~d~~~ 169 (538)
. +| |.||++++|+|++. ++||||||||.. .|+.+||+|+|||++++..+ .+. .+++|++|+++||++
T Consensus 110 ~~~~--i~PG~~~~y~~~~~-~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~ 185 (340)
T 2bw4_A 110 ALTQ--VNPGEETTLRFKAT-KPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPL-TYDKIYYVGEQDFYV 185 (340)
T ss_dssp GGCC--BCTTEEEEEEEECC-SCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEE-CCSEEEEEEEEEECC
T ss_pred cceE--eCCCCEEEEEEECC-CCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCc-CcceeEEEeeeeeee
Confidence 3 54 99999999999995 799999999964 79999999999999865311 122 358899999999998
Q ss_pred c--ChhhHH----------HHhccCCCCCCCCeEEEcCCCCC---CceEEEecCCEEEEEEEecCCCceEEEEEeCCeeE
Q 009283 170 K--NHTDLK----------AILDSGSDLPFPDGLVINGRGSN---ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKML 234 (538)
Q Consensus 170 ~--~~~~~~----------~~~~~~~~~~~~~~~liNG~~~~---~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~ 234 (538)
. .++.+. ...+. .....++.++|||+.+. .+.++|++||++||++.|++.. .+..++++|.|+
T Consensus 186 ~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~iNG~~~~~~~~~~l~v~~G~r~Rl~n~~~~~~-~~~~~i~gh~~~ 263 (340)
T 2bw4_A 186 PKDEAGNYKKYETPGEAYEDAVKA-MRTLTPTHIVFNGAVGALTGDHALTAAVGERVLVVHSQANRD-TRPHLIGGHGDY 263 (340)
T ss_dssp CBCTTSCBCCCCSHHHHHHHHHHH-HHTTCCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSC-BCEEEETCCEEE
T ss_pred ccccCCcccccccccccccchhhH-hhcCCCCEEEECCccCCccCCCceEcCCCCEEEEEECCCCCc-cceEEecCcceE
Confidence 3 222110 00000 01246789999999853 2899999999887766665443 233358999999
Q ss_pred EEEEcCeecccc--eecEEEEcCCCeEEEEEEeCCCCcceEEEEEeeccCCccceEEEEEecCCC
Q 009283 235 LVEVEGTHTLQN--TYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSA 297 (538)
Q Consensus 235 via~DG~~~~p~--~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~ 297 (538)
|++ ||.++.+. .++++.|+||||+||+|+++ .+|.|+++++...........++++|.+..
T Consensus 264 Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~-~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 264 VWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFR-QPGVYAYVNHNLIEAFELGAAGHFKVTGEW 326 (340)
T ss_dssp EET-TCCTTSCCEEEESCCCBCTTEEEEEEEECC-SCEEEEEEESSHHHHHTTSCEEEEEEESCC
T ss_pred EeC-CCcccCCccccceEEEeCCCceEEEEEECC-CCeeeEEEcCchHHHHhCCCEEEEEECCCC
Confidence 997 99988653 57999999999999999999 589999999875311123456889998755
No 34
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=6.3e-41 Score=369.86 Aligned_cols=263 Identities=15% Similarity=0.163 Sum_probs=191.2
Q ss_pred CCCeEEEEEEEEEEEecCC-------------C-eeeE--EEEE----------------cCcCcCceEEEecCCEEEEE
Q 009283 23 ESPYRFFNWNVTYGDIYPL-------------G-VKQQ--GILI----------------NGQFPGPSIEAVTNDNLIIS 70 (538)
Q Consensus 23 ~~~~~~~~l~~~~~~~~~~-------------G-~~~~--~~~~----------------Ng~~pgP~i~v~~Gd~v~v~ 70 (538)
.+.+|+|-|-+.+..+... | +.++ ...| ++++|||+|+|++||+|+|+
T Consensus 3 ~~~~r~y~i~a~e~~w~y~~~~~~~~~~~~~~~~~y~k~v~~~ytd~~f~~~~~~~~~~~~~~~pGP~I~~~~Gd~v~v~ 82 (647)
T 1sdd_B 3 TGNRKYYYIAAEEISWDYSKFVQSDDVDYVPEDTVYKKVVFRKYLDSTFTKLDPQGEYEEHLGILGPVIRAEVDDVIQVR 82 (647)
T ss_dssp CCCEEEEEEEEEEEEEETTTTC--------CCCCEEEEEEEEEESSTTCCSBCCCCSTTGGGTTSCCCEEEETTCEEEEE
T ss_pred CCCeEEEEEEEEEEEEeCCCCCcccccCccccCCeEeEEEEEEecCCcccccccCCCcccccCCcCceEEEeCCCEEEEE
Confidence 3568899999988876322 2 2222 2334 34789999999999999999
Q ss_pred EEeCCCCCceeeeccccCCCCCCCCCCCC-C--------CCCCCCCCeEEEEEEecCC-----cc----ceeeecCch--
Q 009283 71 VFNALDEPFLISWNGVQQRRNSWQDGVYG-T--------NCPIPPGKNFTYVLQVKDQ-----IG----SYFYFPSLA-- 130 (538)
Q Consensus 71 ~~N~l~~~~siH~HG~~~~~~~~~DG~~~-t--------q~~i~pG~~~~Y~f~~~~~-----~G----t~wYH~H~~-- 130 (538)
|+|.|+++++|||||+++. +.+||+|+ + ||+|.||++|+|+|+++++ +| |||||||..
T Consensus 83 ~~N~l~~~~siH~HGl~~~--~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH~~~~ 160 (647)
T 1sdd_B 83 FKNLASRPYSLHAHGLSYE--KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPE 160 (647)
T ss_dssp ECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHH
T ss_pred EEECCCCceEEecCcceeC--CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccCCCCc
Confidence 9999999999999999875 57999997 6 8999999999999999754 57 999999984
Q ss_pred hhhhcceeeEEEEecCCCCCC--CCCCCCCceEEEEe------eecccChhhHHHHhccCCCCCCCCeEEEcCCCCCCce
Q 009283 131 FHKAAGGYGGIKIASRPLIPV--PFDPPAGDFTILAG------DWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNANT 202 (538)
Q Consensus 131 ~q~~~Gl~G~liV~~~~~~~~--~~~~~~~e~~l~l~------d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~p~ 202 (538)
.|+.+||+|+|||+++..... ..+..++|++|+++ ||+++.................++.++|||+.+..|.
T Consensus 161 ~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~p~ 240 (647)
T 1sdd_B 161 KDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRASSEVKNSHEFHAINGMIYNLPG 240 (647)
T ss_dssp HHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC---------------CCCEEEEETTBSSCCCC
T ss_pred ccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccCCcchhhcCceeccCCEecCCCC
Confidence 799999999999999764221 11234689999999 6766543221000000111235789999999854589
Q ss_pred EEEecCCEEEEEEEecCCCc-eEEEEEeCCeeEEEEEcCeecccceecEEEEcCCCeEEEEEEeCCCCcceEEEEEeecc
Q 009283 203 FTVDQGKTYRFRISNVGIST-SINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFT 281 (538)
Q Consensus 203 ~~v~~G~~~rlRliN~~~~~-~~~~~l~gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~ 281 (538)
++|++|++|||||+|++... .|.||+|||.|+|++.||. .++++.|+||||+||+|+++ .+|.|.++++....
T Consensus 241 l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~~-----~~d~v~l~pg~r~~v~~~~~-~pG~w~~hch~~~h 314 (647)
T 1sdd_B 241 LRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQH-----QLGVWPLLPGSFKTLEMKAS-KPGWWLLDTEVGEI 314 (647)
T ss_dssp CEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSCE-----EESSEEECTTEEEEEEEECC-SSEEEEEECCCHHH
T ss_pred eEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCCc-----ccceEEECCCeEEEEEEEec-cceEeecccCcccc
Confidence 99999999999999999864 8999999999999998864 58999999999999999999 57999999876422
Q ss_pred CCccceEEEEEec
Q 009283 282 SQVLSATSVLHYS 294 (538)
Q Consensus 282 ~~~~~~~ail~y~ 294 (538)
......+.+.+.
T Consensus 315 -~~~Gm~~~~~V~ 326 (647)
T 1sdd_B 315 -QRAGMQTPFLIV 326 (647)
T ss_dssp -HTTTCEEEEEEE
T ss_pred -cccccccceeee
Confidence 112334555553
No 35
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=3e-39 Score=342.18 Aligned_cols=255 Identities=16% Similarity=0.196 Sum_probs=210.5
Q ss_pred CCeEEEEEEEEEEEecC-CCeeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCC--CCceeeeccccCCCCCCCCCCCC-
Q 009283 24 SPYRFFNWNVTYGDIYP-LGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALD--EPFLISWNGVQQRRNSWQDGVYG- 99 (538)
Q Consensus 24 ~~~~~~~l~~~~~~~~~-~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~--~~~siH~HG~~~~~~~~~DG~~~- 99 (538)
+.++.++|+++.....+ +|....+|+|||++|||+|++++||+++|+|+|.++ ..++|||||+. .+||++.
T Consensus 161 ~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~-----~~DG~~~~ 235 (447)
T 2dv6_A 161 AKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGAT-----GPGGAAAF 235 (447)
T ss_dssp CCEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGGGGG
T ss_pred CcEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeecccc-----CCCCCCcc
Confidence 34567888887777666 688899999999999999999999999999999985 57999999984 3799886
Q ss_pred CCCCCCCCCeEEEEEEecCCccceeeecCch---hhhhcceeeEEEEecCCCCCCCCCCCCCceEEEEeeecccChh---
Q 009283 100 TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLA---FHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHT--- 173 (538)
Q Consensus 100 tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~---~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~--- 173 (538)
++ |.||++++|.|++. ++||||||||.. .|+.+||+|+|+|+++... +..++|++++++||++....
T Consensus 236 ~~--i~pG~~~~~~~~~~-~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~~----P~~d~~~~~~~~~~~~~~~~~~~ 308 (447)
T 2dv6_A 236 TQ--TDPGEETVVTFKAL-IPGIYVYHCATPSVPTHITNGMYGLLLVEPEGGL----PQVDREFYVMQGEIYTVKSFGTS 308 (447)
T ss_dssp CC--BCTTCEEEEEEECC-SCEEEEEECCSSSHHHHHHTTCEEEEEEECTTCS----CCCSEEEEEEEEEECBSSCTTCC
T ss_pred EE--eCCCCEEEEEEECC-CCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCCC----CCCCeeEEEEecccccCCccccc
Confidence 43 99999999999994 799999999963 7899999999999986532 23478899999999875321
Q ss_pred -----hHHHHhccCCCCCCCCeEEEcCCCCCC---ceEEEecCCEEEEEEEecCCCceEEEEEeCCeeEEEEEcCeeccc
Q 009283 174 -----DLKAILDSGSDLPFPDGLVINGRGSNA---NTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQ 245 (538)
Q Consensus 174 -----~~~~~~~~~~~~~~~~~~liNG~~~~~---p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p 245 (538)
...... ...++.++|||+.+.. +.+++++|++|||||+|++....|.|||+||.|+||+.||.++++
T Consensus 309 g~~~~~~~~~~-----~~~~~~~~iNG~~~~~~~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG~~~~~ 383 (447)
T 2dv6_A 309 GEQEMDYEKLI-----NEKPEYFLFNGSVGSLTRSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSVVSP 383 (447)
T ss_dssp EECCBBHHHHH-----TTCCSEEEETTSTTCCCCCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGGCSSSC
T ss_pred ccccCChHHhh-----ccCCCEEEECCcccCCCCCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCCcccCC
Confidence 011111 1246899999998532 479999999999999999988899999999999999999999876
Q ss_pred c--eecEEEEcCCCeEEEEEEeCCCCcceEEEEEeeccCCccceEEEEEecCCC
Q 009283 246 N--TYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSA 297 (538)
Q Consensus 246 ~--~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~ 297 (538)
. .+|++.|.||||++|+|+++ .+|.|+++++.... ......++++|.+..
T Consensus 384 p~~~~dtv~l~pg~r~~i~~~~~-~pG~~~~hch~~~h-~~~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 384 PLIGVQTVSVPPGGATIVDFKID-RAGRYILVDHALSR-LEHGLVGFLNVDGPK 435 (447)
T ss_dssp CEEEESEEEECTTEEEEEEEECC-SCEEEEEEESSGGG-GGGTCCEEEEECSCS
T ss_pred CcccccEEEECCCcEEEEEEECC-CCEEEEEEecCcCc-cccCCEEEEEEeCCC
Confidence 4 58999999999999999999 68999999987543 223457889997654
No 36
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=7.9e-42 Score=343.02 Aligned_cols=211 Identities=12% Similarity=0.184 Sum_probs=159.8
Q ss_pred EEEEEcCcCcCceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCC-C--------CCCCCCCCeEEEEEEe
Q 009283 46 QGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYG-T--------NCPIPPGKNFTYVLQV 116 (538)
Q Consensus 46 ~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-t--------q~~i~pG~~~~Y~f~~ 116 (538)
...++| ++|||+|+|++||+|+|+|+|.++++++|||||+++. +.+||++. + ||+|.||++|+|+|++
T Consensus 50 ~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~--~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~ 126 (306)
T 1sdd_A 50 PQSRTS-GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYS--KFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWII 126 (306)
T ss_dssp CCCSSC-CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCC--TTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEEC
T ss_pred cccccC-CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecc--cccCCCccCCCCcccccCCCccCCCCeEEEEEEe
Confidence 445678 5899999999999999999999999999999999853 34677664 2 7999999999999999
Q ss_pred cCC---------ccceeeecCchh--hhhcceeeEEEEecCCCC---CCCCCCCCCceEEEEeeecccChhhHHHHhccC
Q 009283 117 KDQ---------IGSYFYFPSLAF--HKAAGGYGGIKIASRPLI---PVPFDPPAGDFTILAGDWYKKNHTDLKAILDSG 182 (538)
Q Consensus 117 ~~~---------~Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~---~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~ 182 (538)
+++ +||||||||... |+.+||+|+|||+++... +.+. ..++|++++++||..+.. +
T Consensus 127 ~~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~-~~d~e~~l~~~d~d~~~~--~------- 196 (306)
T 1sdd_A 127 SEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQK-MFEKQHVLMFAVFDESKS--W------- 196 (306)
T ss_dssp CGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBS-SSCCCCCCBCCEEETTSS--S-------
T ss_pred CCccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcC-cccceEEEEEEecccccc--c-------
Confidence 644 379999999765 889999999999987431 1222 357899999999843211 0
Q ss_pred CCCCCCCeEEEcCCCC-CCceEEEecCCEEEEEEEecCCC-ceEEEEEeCCeeEEEEEcCeecccceecEEEEcCCCeEE
Q 009283 183 SDLPFPDGLVINGRGS-NANTFTVDQGKTYRFRISNVGIS-TSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYS 260 (538)
Q Consensus 183 ~~~~~~~~~liNG~~~-~~p~~~v~~G~~~rlRliN~~~~-~~~~~~l~gh~~~via~DG~~~~p~~~~~v~l~pgeR~d 260 (538)
....++.++|||+.+ ..|.++|++|++|||||+|+|.. ..|.||++||.|.+ ||. .+|++.|.||||+|
T Consensus 197 -~~~~~~~~~ING~~~~~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG~-----~~dtv~l~pger~~ 267 (306)
T 1sdd_A 197 -NQTSSLMYTVNGYVNGTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NHH-----KISAITLVSATSTT 267 (306)
T ss_dssp -SCCCCEEECSSSCCSSCCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TTE-----ECSCCCEETTCCBC
T ss_pred -ccCCCcceeeCCEecCCCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CCE-----EcceEEECCCcEEE
Confidence 012467899999984 23889999999999999999986 57889999999985 884 38999999999999
Q ss_pred EEEEeCCCCcceEEEEEee
Q 009283 261 VLVRADQPPQGYYIVISTR 279 (538)
Q Consensus 261 v~v~~~~~~g~y~i~~~~~ 279 (538)
++|+++ .+|.|+++++..
T Consensus 268 v~~~~~-~pG~~~~hch~~ 285 (306)
T 1sdd_A 268 ANMTVS-PEGRWTIASLIP 285 (306)
T ss_dssp ---------CCCCCBCCST
T ss_pred EEEEcC-CCeEEEEEeCCh
Confidence 999998 689999988753
No 37
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=1.1e-40 Score=370.19 Aligned_cols=248 Identities=13% Similarity=0.140 Sum_probs=195.5
Q ss_pred CCCeEEEEEEEEEEEe--cCCCe----------------eeE-EEEE-----cC-----------cCcCceEEEecCCEE
Q 009283 23 ESPYRFFNWNVTYGDI--YPLGV----------------KQQ-GILI-----NG-----------QFPGPSIEAVTNDNL 67 (538)
Q Consensus 23 ~~~~~~~~l~~~~~~~--~~~G~----------------~~~-~~~~-----Ng-----------~~pgP~i~v~~Gd~v 67 (538)
.+.+|+|.|.+++..+ .|+|. ++- .+.| ++ ++|||+|||++||+|
T Consensus 130 ~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~v 209 (770)
T 2r7e_B 130 QKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDNI 209 (770)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSCE
T ss_pred CCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCEE
Confidence 4678999999999875 45542 222 2333 33 589999999999999
Q ss_pred EEEEEeCCCCCceeeeccccCCCCCCCCCCCCCCCCCCCCCeEEEEEEecC---------CccceeeecCchh--hhhcc
Q 009283 68 IISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKD---------QIGSYFYFPSLAF--HKAAG 136 (538)
Q Consensus 68 ~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~tq~~i~pG~~~~Y~f~~~~---------~~Gt~wYH~H~~~--q~~~G 136 (538)
+|+|+|.++++++|||||+++..... ||++++||+|+||++|+|+|++++ ++||||||||.+. |+.+|
T Consensus 210 ~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~~G 288 (770)
T 2r7e_B 210 MVTFRNQASRPYSFYSSLISYEEDQR-QGAEPRKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVHSG 288 (770)
T ss_dssp EEEEECCSSSCCCCCBTTCCCCCCSS-SCTTTTSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHHTS
T ss_pred EEEEEECCCCCcceeecccccccccC-CCCcCccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHHhCC
Confidence 99999999999999999999977643 699989999999999999999974 7999999999875 89999
Q ss_pred eeeEEEEecCCCCCC--CCCCCCCceEEEEee------ecccChhhHHHHhccCC-----C---CCCCCeEEEcCCCC-C
Q 009283 137 GYGGIKIASRPLIPV--PFDPPAGDFTILAGD------WYKKNHTDLKAILDSGS-----D---LPFPDGLVINGRGS-N 199 (538)
Q Consensus 137 l~G~liV~~~~~~~~--~~~~~~~e~~l~l~d------~~~~~~~~~~~~~~~~~-----~---~~~~~~~liNG~~~-~ 199 (538)
|+|+|||+++..... .....++|++|++++ |+++.. +........ + ....+.++|||+.+ .
T Consensus 289 L~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~--~~~~~~~p~~~~~~d~~~~~~~~~~~ING~~~~~ 366 (770)
T 2r7e_B 289 LIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTEN--MERNCRAPCNIQMEDPTFKENYRFHAINGYIMDT 366 (770)
T ss_dssp CCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGG--GSSCSCCSSCCCSSSSSSTTTSCEECTTSCTTTT
T ss_pred ceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccc--hhhcccCccccccCCccccccCCccccCCccCCC
Confidence 999999999764221 112357899888754 444321 111110000 0 11235689999985 3
Q ss_pred CceEEEecCCEEEEEEEecCCC-ceEEEEEeCCeeEEEEEcCeecccceecEEEEcCCCeEEEEEEeCCCCcceEEEEEe
Q 009283 200 ANTFTVDQGKTYRFRISNVGIS-TSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVIST 278 (538)
Q Consensus 200 ~p~~~v~~G~~~rlRliN~~~~-~~~~~~l~gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~ 278 (538)
.+.++|++|++|||||+|++.. ..|.||||||.|+|++.||. .+|++.|.||||++|+|+++ .+|.|.++++.
T Consensus 367 ~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~~ad-~pG~w~~hcH~ 440 (770)
T 2r7e_B 367 LPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEMLPS-KAGIWRVECLI 440 (770)
T ss_dssp CCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEECCS-SCBCCCBCCCS
T ss_pred CCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEEEeC-CCCceEEEecc
Confidence 4789999999999999999865 47999999999999999974 58999999999999999998 68999998875
Q ss_pred e
Q 009283 279 R 279 (538)
Q Consensus 279 ~ 279 (538)
.
T Consensus 441 ~ 441 (770)
T 2r7e_B 441 G 441 (770)
T ss_dssp H
T ss_pred c
Confidence 3
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=5.7e-37 Score=339.90 Aligned_cols=216 Identities=18% Similarity=0.201 Sum_probs=168.7
Q ss_pred cCcCceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCC-----CCCC-CCCCCCCCCeEEEEEEecCCcc-----
Q 009283 53 QFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQD-----GVYG-TNCPIPPGKNFTYVLQVKDQIG----- 121 (538)
Q Consensus 53 ~~pgP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~D-----G~~~-tq~~i~pG~~~~Y~f~~~~~~G----- 121 (538)
.+|||+||+++||+|+|+|+|.+++++||||||+++. .+++| |++. +||+|.||++|+|+|++++++|
T Consensus 448 g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~d 526 (742)
T 2r7e_A 448 GILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSD 526 (742)
T ss_dssp CSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSSS
T ss_pred CCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCcccC
Confidence 5799999999999999999999999999999999874 44566 4565 8999999999999999975554
Q ss_pred ----ceeeecCch--hhhhcceeeEEEEecCCCCC---CCCCCCCCceEEEEeeecccCh----hhHHHHhccCCCC---
Q 009283 122 ----SYFYFPSLA--FHKAAGGYGGIKIASRPLIP---VPFDPPAGDFTILAGDWYKKNH----TDLKAILDSGSDL--- 185 (538)
Q Consensus 122 ----t~wYH~H~~--~q~~~Gl~G~liV~~~~~~~---~~~~~~~~e~~l~l~d~~~~~~----~~~~~~~~~~~~~--- 185 (538)
|||||||.. .|+.+||+|+|||+++.... .+. ..|+|++|++++|..+.+ ..+..........
T Consensus 527 ~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~-~~d~E~~l~~~~fde~~~wy~~~~~~~~~~~p~~v~~~ 605 (742)
T 2r7e_A 527 PRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQI-MSDKRNVILFSVFDENRSWYLTENIQRFLPNPAGVQLE 605 (742)
T ss_dssp CSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSS-CCSCCCEEEECBCCGGGSSCSHHHHHHHSSSSSCSCCC
T ss_pred CCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcC-CCCceEEEEeeccccccccccccchhhcccCchhcccc
Confidence 999999976 47899999999999875311 112 458899999975432211 1111111100000
Q ss_pred -----CCCCeEEEcCCCCCCceEEEecCCEEEEEEEecCCC-ceEEEEEeCCeeEEEEEcCeecccceecEEEEcCCCeE
Q 009283 186 -----PFPDGLVINGRGSNANTFTVDQGKTYRFRISNVGIS-TSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSY 259 (538)
Q Consensus 186 -----~~~~~~liNG~~~~~p~~~v~~G~~~rlRliN~~~~-~~~~~~l~gh~~~via~DG~~~~p~~~~~v~l~pgeR~ 259 (538)
.....++|||+.+....+.+++||+|||||+|+|.. ..|.|||+||.|+|+ +..+|++.|.||||+
T Consensus 606 ~~~~~~~~~~~~ING~~~~~~~l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~~~~Dtv~l~Pg~~~ 677 (742)
T 2r7e_A 606 DPEFQASNIMHSINGYVFDSLQLSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------MVYEDTLTLFPFSGE 677 (742)
T ss_dssp CHHHHGGGCCBCTTTTCSSCCCCCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------SSSBCSSCCCCCSSE
T ss_pred cccccccCceeeecCcCCCCCcEEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------ccceeEEEECCCcEE
Confidence 001247899998644458999999999999998764 468999999999986 567899999999999
Q ss_pred EEEEEeCCCCcceEEEEEee
Q 009283 260 SVLVRADQPPQGYYIVISTR 279 (538)
Q Consensus 260 dv~v~~~~~~g~y~i~~~~~ 279 (538)
+|+|+++ .+|.|.+.++..
T Consensus 678 ~v~~~ad-~pG~w~~hcH~~ 696 (742)
T 2r7e_A 678 TVFMSME-NPGLWILGCHNS 696 (742)
T ss_dssp ECCEECC-CCCCSCCEECCC
T ss_pred EEEEEcC-CCeEEEEEeCCc
Confidence 9999998 789999999865
No 39
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.97 E-value=1.7e-30 Score=258.40 Aligned_cols=230 Identities=16% Similarity=0.149 Sum_probs=165.9
Q ss_pred CCeEEEcCCCCCCceEEEecCCEEEEEEEecCCCceEEEEEeCCeeEEEEEcCeecccceecEEEEcCCCeEEEEEEeCC
Q 009283 188 PDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ 267 (538)
Q Consensus 188 ~~~~liNG~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~ 267 (538)
...+++||+.. .|.|+++.|+++++|+.|.... .+.+|+||.. ..+.||.+. .+...|.|||++++.++++
T Consensus 54 ~~~~~~ng~~p-gP~i~~~~Gd~v~v~~~N~~~~-~~~iH~HG~~--~~~~DG~p~----~~~~~i~PG~~~~y~f~~~- 124 (288)
T 3gdc_A 54 FKGWSYNGRIP-GPTLWAREGDALRIHFTNAGAH-PHTIHFHGVH--RATMDGTPG----IGAGSIAPGQSFTYEFDAT- 124 (288)
T ss_dssp EEEEEETTBSS-CCEEEEETTCEEEEEEEECSSS-CBCCEESSCC--CGGGSCCTT----STTCSBCTTCEEEEEEECC-
T ss_pred EEEEEECCccC-CCcEEEeCCCEEEEEEEeCCCC-cccEEecccc--ccccCCCCC----ccceeECCCCEEEEEEEcC-
Confidence 45899999974 6999999999999999999876 7889999975 356788764 3446789999999999997
Q ss_pred CCcceEEEEEeecc--CCccceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhcccCCCCCCCCCCCCCCCccccc
Q 009283 268 PPQGYYIVISTRFT--SQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLIN 345 (538)
Q Consensus 268 ~~g~y~i~~~~~~~--~~~~~~~ail~y~~~~~~~~~~~p~~P~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~ 345 (538)
++|+||+.++.... .......+.|.+..... .|..+.+..
T Consensus 125 ~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~--------~~~~d~e~~------------------------------ 166 (288)
T 3gdc_A 125 PFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEG--------RPPADDEMV------------------------------ 166 (288)
T ss_dssp SCEEEEEECCCSSHHHHHHTTCEEEEEEECSSC--------CCCCSEEEE------------------------------
T ss_pred CCccEEEEecCcchHHHHhCcCeEEEEEeCCcc--------CCCCcceEE------------------------------
Confidence 79999999986421 11112334444432210 010010000
Q ss_pred cceEEEEeccc-CCCCCeEeEEECCeeecCCCCchhhhcccCCCCccccCCCCCCCCCCCcceeeEEEEccCCcEEEEEE
Q 009283 346 TTHTIRLQNTA-PTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVF 424 (538)
Q Consensus 346 ~~~~~~~~~~~-~~~~g~~~~~iNg~~f~~p~~P~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~l 424 (538)
+.+..-. ........|+|||+.|.. . ...++++.|++|+|.|
T Consensus 167 ----l~~~d~~~~~g~~~~~~~iNG~~~~~-----~----------------------------~~~l~v~~Ge~vr~~l 209 (288)
T 3gdc_A 167 ----MVMNGYNTDGGDDNEFYSVNGLPFHF-----M----------------------------DFPVKVKQHELVRIHL 209 (288)
T ss_dssp ----EEEEEECCSSTTCCSEEEETTSTTHH-----H----------------------------HSCEEEETTCCEEEEE
T ss_pred ----EEEeeEecCCCCCcceEEECcccccc-----c----------------------------CcccccCCCCEEEEEE
Confidence 0000000 000113468999987631 0 0124678899999999
Q ss_pred EcCCCC--CCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhhhhc
Q 009283 425 ENPEDT--LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQYL 502 (538)
Q Consensus 425 ~N~~~~--~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~ 502 (538)
.|.+.. .||||||||.|+|++.+.. +..+.++||+.|+|+++++|+|++++||.|+||||+++|++.
T Consensus 210 ~N~g~~~~~H~fHlhG~~f~v~~~g~~-----------~~~~~~~Dtv~v~pg~~~~v~~~~~~pG~~~~hCH~~~H~~~ 278 (288)
T 3gdc_A 210 INVLEYDPINSFHIHGNFFHYYPTGTM-----------LTPSEYTDTISQVQGQRGILELRFPYPGKFMFHAHKTEFAEL 278 (288)
T ss_dssp EECCCSSSEEEEEETTCCEEEEETTCC-----------SSCSEEESEEEEETTCEEEEEECCCSCEEEEEECSSHHHHTT
T ss_pred EeCCCCCcceeEEEcCCEEEEEcCCCc-----------cCCCceeeEEEeCCCceEEEEEECCCCEEEEEEecChHHHhc
Confidence 999854 5999999999999975431 233589999999999999999999999999999999999999
Q ss_pred ceEEEEEEec
Q 009283 503 GQQFYLRVYS 512 (538)
Q Consensus 503 GMm~~~~V~~ 512 (538)
|||+.|+|.+
T Consensus 279 GM~~~~~V~~ 288 (288)
T 3gdc_A 279 GWMGFFEVSA 288 (288)
T ss_dssp TCEEEEEEEC
T ss_pred CCCEEEEEeC
Confidence 9999999863
No 40
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.96 E-value=1.6e-29 Score=254.52 Aligned_cols=247 Identities=17% Similarity=0.154 Sum_probs=169.4
Q ss_pred CeEEEcCCCCCCceEEEecCCEEEEEEEecCCCceEEEEEeCCeeEE-EEEcCeecccceecEEEEcCCCeEEEEEEeCC
Q 009283 189 DGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLL-VEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ 267 (538)
Q Consensus 189 ~~~liNG~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~v-ia~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~ 267 (538)
..+++||+.. .|.|+++.|+++++|+.|.... .+.+|+||....- .+.||.+. +....|.|||+++..++++
T Consensus 23 ~~~~~ng~~p-GP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG~~~~y~f~~~- 95 (318)
T 3g5w_A 23 HTFAFNGQVP-APLIHVMEGDDVTVNVTNMTTL-PHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPGDTFTYKFKAE- 95 (318)
T ss_dssp EEEEETTBSS-CCEEEEETTCEEEEEEEECSSS-CBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECC-
T ss_pred EEEEECCccC-CceEEEeCCCEEEEEEEeCCCC-ceeEEecCcCCCCCcccCCCcc----cccccCCCCCEEEEEEEcC-
Confidence 5799999863 6999999999999999999865 7889999986542 35788764 3446789999999999998
Q ss_pred CCcceEEEEEeeccCCc--cceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhcccCCCCCCCCCCCCCCCccccc
Q 009283 268 PPQGYYIVISTRFTSQV--LSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLIN 345 (538)
Q Consensus 268 ~~g~y~i~~~~~~~~~~--~~~~ail~y~~~~~~~~~~~p~~P~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~ 345 (538)
.+|+||+.++.....+. ....+.|.+..... .+.+... +.+..+. .. ++....... .. . +.
T Consensus 96 ~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~---~~~~~~~--d~e~~l~-l~--dw~~~~~~~-~~-~-----~~-- 158 (318)
T 3g5w_A 96 PAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNP---LPIEKTV--TKDYILM-LS--DWVSSWANK-PG-E-----GG-- 158 (318)
T ss_dssp SCEEEEEECCSSHHHHHHHSCCEEEEEEECSSC---CHHHHTC--CEEEEEE-EE--EECGGGTTC-TT-C-----CC--
T ss_pred CCEEEEEEccCChhhhhccCCCEEEEEEcCCCc---ccccccc--cceeEEE-EE--eeccccccc-cc-c-----CC--
Confidence 78999999876421110 12333444443220 0000000 0000000 00 000000000 00 0 00
Q ss_pred cceEEEEecccCCCCCeEeEEECCeeecCCCCchhhhcccCCCCccccCCCCCCCCCCCcceeeEEEEccCCcEEEEEEE
Q 009283 346 TTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFE 425 (538)
Q Consensus 346 ~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~P~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~l~ 425 (538)
........|.|||+.|.. ...++++.|++|+|+|.
T Consensus 159 -----------~~~~~~d~~~ING~~~~~----------------------------------~~~l~v~~G~~vrlrli 193 (318)
T 3g5w_A 159 -----------IPGDVFDYYTINAKSFPE----------------------------------TQPIRVKKGDVIRLRLI 193 (318)
T ss_dssp -----------CTTCCCCEEEETTBCBTS----------------------------------SCCEEECTTCEEEEEEE
T ss_pred -----------CCCCcCcEEEEcCcCCCC----------------------------------CccEEeCCCCEEEEEEE
Confidence 000112358999987621 11256788999999999
Q ss_pred cCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhhhh----
Q 009283 426 NPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQY---- 501 (538)
Q Consensus 426 N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d---- 501 (538)
|.+...||||||||.|+|+++++.. +..|.++||+.|+|++++.|+|++||||.|+||||+++|++
T Consensus 194 N~~~~~h~~hlhGh~f~vi~~dG~~----------~~~p~~~dtv~l~pger~~v~~~a~~pG~w~~hCH~~~H~~~g~~ 263 (318)
T 3g5w_A 194 GAGDHVHAIHTHGHISQIAFKDGFP----------LDKPIKGDTVLIGPGERYDVILNMDNPGLWMIHDHVDTHTTNGDK 263 (318)
T ss_dssp ECSSSCEEEEETTSCEEEEEETTEE----------EEEEEEESEEEECTTCEEEEEEECCSCSEEEEEESSGGGSCBTTB
T ss_pred eCCCceEEEEECCcEEEEEecCCcc----------cCCCccccEEEECCCCEEEEEEECCCCeeEEEEeccHHHhhccCc
Confidence 9988899999999999999986532 23467999999999999999999999999999999999998
Q ss_pred --cceEEEEEEecCC
Q 009283 502 --LGQQFYLRVYSSA 514 (538)
Q Consensus 502 --~GMm~~~~V~~p~ 514 (538)
.|||..+++....
T Consensus 264 ~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 264 PDGGIMTTIEYEEVG 278 (318)
T ss_dssp SSCBSEEEEEETTTC
T ss_pred CCCCCEEEEEECCCC
Confidence 5899999997543
No 41
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.96 E-value=5.5e-29 Score=253.18 Aligned_cols=245 Identities=16% Similarity=0.127 Sum_probs=165.4
Q ss_pred CCeEEEcCCCCCCceEEEecCCEEEEEEEecCCCceEEEEEeCCeeEEEEE---cCeecccceecEEEEcCCCeEEEEEE
Q 009283 188 PDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEV---EGTHTLQNTYDSLDIHLGQSYSVLVR 264 (538)
Q Consensus 188 ~~~~liNG~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~---DG~~~~p~~~~~v~l~pgeR~dv~v~ 264 (538)
...+++||+.. .|.|++++|+++|+||+|.+.. .+.+|.|| +.+.+. ||.+. ++...|.||||+++.++
T Consensus 23 ~~~~~~NG~~p-GP~I~v~~Gd~v~v~v~N~l~~-~~siH~HG--~~~~~~~~~DGvp~----vtq~~I~PG~~~~y~f~ 94 (339)
T 2zwn_A 23 YKVFGFNGQVP-GPLIHVQEGDDVIVNVTNNTSL-PHTIHWHG--VHQKGTWRSDGVPG----VTQQPIEAGDSYTYKFK 94 (339)
T ss_dssp EEEEEETTBSS-CCEEEEETTCEEEEEEEEESSS-CBCCEEET--CCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEE
T ss_pred EEEEEECCccC-CCeEEEECCCEEEEEEEECCCC-CccEEeCC--CCcCCCcccCCCCc----cccCccCCCCeEEEEEE
Confidence 35799999953 6999999999999999999875 45555555 555554 99863 45567999999999999
Q ss_pred eCCCCcceEEEEEeeccCC-c-cceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhcccCCCCCCCCCCCCCCCcc
Q 009283 265 ADQPPQGYYIVISTRFTSQ-V-LSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYG 342 (538)
Q Consensus 265 ~~~~~g~y~i~~~~~~~~~-~-~~~~ail~y~~~~~~~~~~~p~~P~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~ 342 (538)
++ .+|+||++++.....+ . ....+.+.+..... ..++.....+....+. ++..... ..+...
T Consensus 95 ~~-~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~---~~~~~~~d~e~~l~l~-----d~~~~~~-~~~~~~------ 158 (339)
T 2zwn_A 95 AD-RIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQP---LPIEKRVTKDVIMMMS-----TWESAVA-DKYGEG------ 158 (339)
T ss_dssp CC-SCEEEEEECCSSHHHHTTTSCCEEEEEEECSSC---CTTGGGCSEEEEEEEE-----EECGGGT-TCTTCC------
T ss_pred CC-CCEEEEEEecCCchhhhhcCCceEeEEecCCCc---ccccccCCceEEEEee-----heecccc-cccCCC------
Confidence 98 7899999987543111 1 12233333332211 0111100001000000 0000000 000000
Q ss_pred ccccceEEEEecccCCCCCeEeEEECCeeecCCCCchhhhcccCCCCccccCCCCCCCCCCCcceeeEEEEccCCcEEEE
Q 009283 343 LINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEV 422 (538)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~P~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~ 422 (538)
. . .......|.|||+.|.. ...+.++.|++++|
T Consensus 159 g----------~---~~~~~~~~~ING~~~~~----------------------------------~~~~~v~~G~~vrl 191 (339)
T 2zwn_A 159 G----------T---PMNVADYFSVNAKSFPL----------------------------------TQPLRVKKGDVVKI 191 (339)
T ss_dssp C----------S---TTSCCCEEEETTBCTTS----------------------------------SCCEEECTTCEEEE
T ss_pred C----------C---CccccceEEEccccCCC----------------------------------cccEEECCCCEEEE
Confidence 0 0 00112468899977521 12256788999999
Q ss_pred EEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhh---
Q 009283 423 VFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWAR--- 499 (538)
Q Consensus 423 ~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H--- 499 (538)
.|.|.+...||||||||.|+|++.++.. +.+|.++||+.|+|++++.|+|++|+||.|+||||+++|
T Consensus 192 rliN~~~~~h~~hlhGh~f~vi~~DG~~----------~~~p~~~dtv~l~pg~r~~v~~~~~~pG~w~~hch~~~H~~~ 261 (339)
T 2zwn_A 192 RFFGAGGGIHAMHSHGHDMLVTHKDGLP----------LDSPYYADTVLVSPGERYDVIIEADNPGRFIFHDHVDTHVTA 261 (339)
T ss_dssp EEEECSSSCEEEEETTCCEEEEEETTEE----------EEEEEEESEEEECTTCEEEEEEECCSCSEEEEEECCGGGSCB
T ss_pred EEEeCCCceEEEEECCcEEEEEEeCCee----------cCCCcEEEEEEECCCCEEEEEEEeCCCeeEEEEEechhhccc
Confidence 9999988899999999999999986532 233778999999999999999999999999999999999
Q ss_pred ---hhcceEEEEEEecC
Q 009283 500 ---QYLGQQFYLRVYSS 513 (538)
Q Consensus 500 ---~d~GMm~~~~V~~p 513 (538)
++.|||+.+++...
T Consensus 262 ~~~~~~gm~a~l~~~g~ 278 (339)
T 2zwn_A 262 GGKHPGGPITVIEYDGV 278 (339)
T ss_dssp TTBSSCSSEEEEEETTS
T ss_pred ccccCCCcEEEEEECCC
Confidence 88999999998653
No 42
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.90 E-value=3e-25 Score=222.40 Aligned_cols=232 Identities=13% Similarity=0.075 Sum_probs=139.2
Q ss_pred EEEcCCCCCCceEEEecCCEEEEEEEecCCCceEEEEEeCCeeEEEEEcCeecc----cceecEEEEcCCCeEEEEEEeC
Q 009283 191 LVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTL----QNTYDSLDIHLGQSYSVLVRAD 266 (538)
Q Consensus 191 ~liNG~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~----p~~~~~v~l~pgeR~dv~v~~~ 266 (538)
.++||.. .|.|++++|+++++||.|... ..+.+|.||..+. .+.||.+.. +...+...|.||||++..++++
T Consensus 52 ~~~n~~p--GP~I~v~~Gd~v~v~~~N~l~-~~~siH~HGl~~~-~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~ 127 (306)
T 1sdd_A 52 SRTSGLL--GPTLYAEVGDIMKVHFKNKAH-KPLSIHAQGIKYS-KFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIIS 127 (306)
T ss_dssp CSSCCSC--CCCEEEETTCEEEEEEEECSS-SCBCCEEESSCCC-TTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECC
T ss_pred cccCCcc--CCEEEEeCCCEEEEEEEECCC-CcccEeecceecc-cccCCCccCCCCcccccCCCccCCCCeEEEEEEeC
Confidence 4689877 899999999999999999875 4788888887743 257888752 2233457899999999999997
Q ss_pred CCC---------cceEEEEEeecc---CCccceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhcccCCCCCCCCC
Q 009283 267 QPP---------QGYYIVISTRFT---SQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPN 334 (538)
Q Consensus 267 ~~~---------g~y~i~~~~~~~---~~~~~~~ail~y~~~~~~~~~~~p~~P~~~~~~~~~~~~~~~~~l~~~~~~~~ 334 (538)
+.+ |+||++.+.... ...+.+. +|...... ... .+..+..+.+..+ -+
T Consensus 128 ~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~-liV~~~~~-~~~--~~~~~~~d~e~~l--------~~-------- 187 (306)
T 1sdd_A 128 EHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGP-LLICKKGT-LTE--DGTQKMFEKQHVL--------MF-------- 187 (306)
T ss_dssp GGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEE-EEEECTTC-BCT--TSSBSSSCCCCCC--------BC--------
T ss_pred CccCCCCCCCCceEEEEeccCCchhhhccCceEE-EEEccCCC-CCc--cCCcCcccceEEE--------EE--------
Confidence 543 699999875321 1233333 33332211 000 0000000000000 00
Q ss_pred CCCCCCccccccceEEEEecccCCCCCeEeEEECCeeecCCCCchhhhcccCCCCccccCCCCCCCCCCCcceeeEEEEc
Q 009283 335 PQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAA 414 (538)
Q Consensus 335 p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~P~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~ 414 (538)
.+ +.-..+. .......|.|||+.|.. .| .+++
T Consensus 188 -------~d------~d~~~~~-~~~~~~~~~ING~~~~~--~p--------------------------------~l~v 219 (306)
T 1sdd_A 188 -------AV------FDESKSW-NQTSSLMYTVNGYVNGT--MP--------------------------------DITV 219 (306)
T ss_dssp -------CE------EETTSSS-SCCCCEEECSSSCCSSC--CC--------------------------------CCCC
T ss_pred -------Ee------ccccccc-ccCCCcceeeCCEecCC--Cc--------------------------------ceEE
Confidence 00 0000000 00113457889977521 11 1346
Q ss_pred cCCcEEEEEEEcCCCC--CCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEccCcceeee
Q 009283 415 DFRGFAEVVFENPEDT--LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNI 492 (538)
Q Consensus 415 ~~g~~v~~~l~N~~~~--~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~ 492 (538)
+.|++++|.|.|.+.. .||||||||.|++ .| ..+||+.|.|++.+.|+|++++||.|+|
T Consensus 220 ~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~----dG---------------~~~dtv~l~pger~~v~~~~~~pG~~~~ 280 (306)
T 1sdd_A 220 CAHDHISWHLIGMSSGPELFSIHFNGQVLEQ----NH---------------HKISAITLVSATSTTANMTVSPEGRWTI 280 (306)
T ss_dssp CCC------BBCCCSSSCEECCBCSSTTCEE----TT---------------EECSCCCEETTCCBC--------CCCCC
T ss_pred cCCCEEEEEEEeCCCCCccEEEEECCcEeee----CC---------------EEcceEEECCCcEEEEEEEcCCCeEEEE
Confidence 7799999999999864 6999999999986 11 2589999999999999999999999999
Q ss_pred eecchhhhhcceEEEEEEecC
Q 009283 493 RSENWARQYLGQQFYLRVYSS 513 (538)
Q Consensus 493 HCHil~H~d~GMm~~~~V~~p 513 (538)
|||+++|++.|||+.|.|.+.
T Consensus 281 hch~~~H~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 281 ASLIPRHFQAGMQAYIDIKNC 301 (306)
T ss_dssp BCCSTTTGGGTCBCCC-----
T ss_pred EeCChHHHhcCCeEEEEEecC
Confidence 999999999999999998743
No 43
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.87 E-value=5.8e-22 Score=218.54 Aligned_cols=239 Identities=12% Similarity=0.152 Sum_probs=147.4
Q ss_pred CceEEEecCCEEEEEEEecCCCceEEEEEeCCeeEEEEEcCeeccc----ceecEEEEcCCCeEEEEEEeCCC-----Cc
Q 009283 200 ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQ----NTYDSLDIHLGQSYSVLVRADQP-----PQ 270 (538)
Q Consensus 200 ~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p----~~~~~v~l~pgeR~dv~v~~~~~-----~g 270 (538)
.|.|+++.|+++++||.|.... .+.+|.||.... .+.||.+... ..+....|.|||+++..+++++. +|
T Consensus 68 GP~I~~~~Gd~v~v~~~N~l~~-~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G 145 (647)
T 1sdd_B 68 GPVIRAEVDDVIQVRFKNLASR-PYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPG 145 (647)
T ss_dssp CCCEEEETTCEEEEEECCCSSS-CBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCSSS
T ss_pred CceEEEeCCCEEEEEEEECCCC-ceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCC
Confidence 6999999999999999999875 678888887664 4789987421 22345679999999999999864 57
Q ss_pred ----ceEEEEEeecc---CCccceEEEEEecCCCCCCCCCCCCCCCccccch--hhhhh-hhcccCCCCCCCCCCCCCCC
Q 009283 271 ----GYYIVISTRFT---SQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWS--LEQAR-SLRRNLTASGPRPNPQGSYH 340 (538)
Q Consensus 271 ----~y~i~~~~~~~---~~~~~~~ail~y~~~~~~~~~~~p~~P~~~~~~~--~~~~~-~~~~~l~~~~~~~~p~~~~~ 340 (538)
+||++.+.... ..++.+.-|++-.+.. .. .+..|..+.+.. +.... ...+.+.. +....+
T Consensus 146 ~~c~T~wYHsH~~~~~q~~~GL~G~lIV~~~~~~-~~---~~~~~~~~~e~~l~l~~~d~~~~w~~~~-----~~~~~~- 215 (647)
T 1sdd_B 146 SACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTL-DK---ETNMPVDMREFVLLFMVFDEKKSWYYDK-----KPTRSW- 215 (647)
T ss_dssp CSEEEEEEECCSSHHHHHTTTCEEEEEEECTTSS-CT---TSCCCSSCCEEEEEEEEEEGGGSSCCC-------------
T ss_pred CCceEEEEccCCCCcccccccCccCEEEeeCCCc-cc---ccCCCCcceeEEEEEEeecCcccccccc-----Cccccc-
Confidence 99999886421 1233333333222111 00 011121111111 10000 00011100 000000
Q ss_pred ccccccceEEEEecccCCCCCeEeEEECCeeecCCCCchhhhcccCCCCccccCCCCCCCCCCCcceeeEEEEccCCcEE
Q 009283 341 YGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFA 420 (538)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~P~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v 420 (538)
. ..+. .+ ......+.|||+.|. .| .+.++.|++|
T Consensus 216 -~--~~~~--~~------~~~~~~~~iNG~~~~---~p--------------------------------~l~v~~G~~v 249 (647)
T 1sdd_B 216 -R--RASS--EV------KNSHEFHAINGMIYN---LP--------------------------------GLRMYEQEWV 249 (647)
T ss_dssp -------------------CCCEEEEETTBSSC---CC--------------------------------CCEEETTCEE
T ss_pred -c--cCCc--ch------hhcCceeccCCEecC---CC--------------------------------CeEEcCCCEE
Confidence 0 0000 00 011346889998751 11 1456789999
Q ss_pred EEEEEcCCC--CCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchh
Q 009283 421 EVVFENPED--TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWA 498 (538)
Q Consensus 421 ~~~l~N~~~--~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~ 498 (538)
+|.|.|.+. +.||||+|||.|+|++.+ +.++||+.|.|++++.|+|++++||.|+||||+++
T Consensus 250 rlrliN~~~~~~~h~~hlhG~~f~vi~~d----------------~~~~d~v~l~pg~r~~v~~~~~~pG~w~~hch~~~ 313 (647)
T 1sdd_B 250 RLHLLNLGGSRDIHVVHFHGQTLLENGTQ----------------QHQLGVWPLLPGSFKTLEMKASKPGWWLLDTEVGE 313 (647)
T ss_dssp EEEEEECCCTTCCEEEEETTCCEEECSSS----------------CEEESSEEECTTEEEEEEEECCSSEEEEEECCCHH
T ss_pred EEEEEeCCCCCcceeEEEcCcEEEEecCC----------------CcccceEEECCCeEEEEEEEeccceEeecccCccc
Confidence 999999875 479999999999998653 34789999999999999999999999999999999
Q ss_pred hhhcceEEEEEEec
Q 009283 499 RQYLGQQFYLRVYS 512 (538)
Q Consensus 499 H~d~GMm~~~~V~~ 512 (538)
|++.|||+.|.|.+
T Consensus 314 h~~~Gm~~~~~V~~ 327 (647)
T 1sdd_B 314 IQRAGMQTPFLIVD 327 (647)
T ss_dssp HHTTTCEEEEEEEC
T ss_pred ccccccccceeeec
Confidence 99999999999964
No 44
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.87 E-value=2.2e-21 Score=197.65 Aligned_cols=256 Identities=12% Similarity=0.126 Sum_probs=157.4
Q ss_pred CCeEEEcCCCCCCceEEEecCCEEEEEEEecCC-CceEEEEEeCCeeEEEEEcCeecccceecEEEEcCCCeEEEEEEeC
Q 009283 188 PDGLVINGRGSNANTFTVDQGKTYRFRISNVGI-STSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRAD 266 (538)
Q Consensus 188 ~~~~liNG~~~~~p~~~v~~G~~~rlRliN~~~-~~~~~~~l~gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~ 266 (538)
...+++||+.. .|.|++++|+++|+|+.|... ...|.+++++... +.||..+ . .|.|||++++.++++
T Consensus 59 ~~~~~~ng~~p-gP~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~---~~~~~~~-----~--~i~PG~~~~y~~~~~ 127 (340)
T 2bw4_A 59 IHAMTFNGSVP-GPLMVVHENDYVELRLINPDTNTLLHNIDFHAATG---ALGGGAL-----T--QVNPGEETTLRFKAT 127 (340)
T ss_dssp EEEEEETTBSS-CCEEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGG-----C--CBCTTEEEEEEEECC
T ss_pred EEEEEECCCCC-CCcEEEcCCCEEEEEEEeCCCCCccCcceeCCcCC---CCCCccc-----e--EeCCCCEEEEEEECC
Confidence 45799999853 699999999999999999973 2467777877542 2234322 1 399999999999998
Q ss_pred CCCcceEEEEEeec-----cCCccceEEEEEecCCCC-CCCCCCCCCCCccccchhhhhhhhcccCCCCCCCCCCCCCCC
Q 009283 267 QPPQGYYIVISTRF-----TSQVLSATSVLHYSNSAG-SVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYH 340 (538)
Q Consensus 267 ~~~g~y~i~~~~~~-----~~~~~~~~ail~y~~~~~-~~~~~~p~~P~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~ 340 (538)
.+|+||++++... ....+.+. +.+..... ....+.|.. .+.+..+. ..++.+. ..+.+.+.
T Consensus 128 -~~Gt~wyH~h~~~~~~~~~~~Gl~G~--~iV~~~~~~~~~~~~p~~--~d~e~~l~---l~D~~~~-----~~~~g~~~ 194 (340)
T 2bw4_A 128 -KPGVFVYHCAPEGMVPWHVTSGMNGA--IMVLPRDGLKDEKGQPLT--YDKIYYVG---EQDFYVP-----KDEAGNYK 194 (340)
T ss_dssp -SCEEEEEECCCTTCHHHHHHTTCEEE--EEEECTBCEECTTSCEEC--CSEEEEEE---EEEECCC-----BCTTSCBC
T ss_pred -CCeEEEEEcCCCCchhhHHhCcCEEE--EEEccCcCcccccCCCcC--cceeEEEe---eeeeeec-----cccCCccc
Confidence 5999999998631 11233333 32322211 000000110 01110010 0011110 00000000
Q ss_pred -cccc--ccceEEEEecccCCCCCeEeEEECCeeecCCCCchhhhcccCCCCccccCCCCCCCCCCCcceeeEEEEccCC
Q 009283 341 -YGLI--NTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFR 417 (538)
Q Consensus 341 -~~~~--~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~P~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~g 417 (538)
+... .......... ......|.|||+.|.... ...++++.|
T Consensus 195 ~~~~~~~~~~~~~~~~~----~~~~~~~~iNG~~~~~~~--------------------------------~~~l~v~~G 238 (340)
T 2bw4_A 195 KYETPGEAYEDAVKAMR----TLTPTHIVFNGAVGALTG--------------------------------DHALTAAVG 238 (340)
T ss_dssp CCCSHHHHHHHHHHHHH----TTCCSEEEETTSTTTTSG--------------------------------GGCEEEETT
T ss_pred ccccccccccchhhHhh----cCCCCEEEECCccCCccC--------------------------------CCceEcCCC
Confidence 0000 0000000000 011236889998762100 123567889
Q ss_pred cEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCC-CceeeEEeCCCCEEEEEEEccCcceeeeeecc
Q 009283 418 GFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDT-ISRCTVQVYPKSWTAVYVPLDNVGMWNIRSEN 496 (538)
Q Consensus 418 ~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p-~~rDTv~vp~~g~~~irf~adnpG~w~~HCHi 496 (538)
++++|++.|.+...|++|+|||.|+|++ + |.+. ..| .++||+.|.+++.+.|.|++++||.|+||||+
T Consensus 239 ~r~Rl~n~~~~~~~~~~~i~gh~~~Vi~-d-G~~~---------~~p~~~~dtv~l~pGer~~v~v~~~~pG~y~~~~h~ 307 (340)
T 2bw4_A 239 ERVLVVHSQANRDTRPHLIGGHGDYVWA-T-GKFR---------NPPDLDQETWLIPGGTAGAAFYTFRQPGVYAYVNHN 307 (340)
T ss_dssp CEEEEEEEESSSCBCEEEETCCEEEEET-T-CCTT---------SCCEEEESCCCBCTTEEEEEEEECCSCEEEEEEESS
T ss_pred CEEEEEECCCCCccceEEecCcceEEeC-C-Cccc---------CCccccceEEEeCCCceEEEEEECCCCeeeEEEcCc
Confidence 9999988888778899999999999996 3 2221 112 25799999999999999999999999999999
Q ss_pred h-hhhhcceEEEEEEecCC
Q 009283 497 W-ARQYLGQQFYLRVYSSA 514 (538)
Q Consensus 497 l-~H~d~GMm~~~~V~~p~ 514 (538)
+ +|++.|||+.|+|..+.
T Consensus 308 ~~~h~~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 308 LIEAFELGAAGHFKVTGEW 326 (340)
T ss_dssp HHHHHTTSCEEEEEEESCC
T ss_pred hHHHHhCCCEEEEEECCCC
Confidence 9 69999999999997544
No 45
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.87 E-value=8.2e-22 Score=199.29 Aligned_cols=245 Identities=14% Similarity=0.091 Sum_probs=162.7
Q ss_pred CCeEEEcCCCCCCceEEEecCCEEEEEEEecCCC-ceEEEEEeCCeeEEEEEcCeecccceecEEEEcCCCeEEEEEEeC
Q 009283 188 PDGLVINGRGSNANTFTVDQGKTYRFRISNVGIS-TSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRAD 266 (538)
Q Consensus 188 ~~~~liNG~~~~~p~~~v~~G~~~rlRliN~~~~-~~~~~~l~gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~ 266 (538)
...+++||+.. .|.|+|++|+++++|++|.... ..+.+|+||.. +.||.+. ...|.|||++++.++++
T Consensus 58 ~~~~~~ng~~p-gP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~PG~~~~y~f~~~ 126 (327)
T 1kbv_A 58 YRYWTFDGDVP-GRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAPGRTSTFSFKAL 126 (327)
T ss_dssp EEEEEETTBSS-CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCTTEEEEEEEECC
T ss_pred EEEEEECCccC-CCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecCCCEEEEEEECC
Confidence 35799999853 6999999999999999999753 47888888863 5688642 12489999999999998
Q ss_pred CCCcceEEEEEeecc----CCccceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhcccCCCCCCCCCCCCCCCcc
Q 009283 267 QPPQGYYIVISTRFT----SQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYG 342 (538)
Q Consensus 267 ~~~g~y~i~~~~~~~----~~~~~~~ail~y~~~~~~~~~~~p~~P~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~ 342 (538)
.+|+||++++.... ..++. +.+.+.... ++|. .+.+..+-. -++....... .+ +
T Consensus 127 -~~Gt~wyH~h~~~~~~~~~~Gl~--G~~iV~~~~-----~~p~---~d~e~~l~~---~d~~~~~~~~--~~------g 184 (327)
T 1kbv_A 127 -QPGLYIYHCAVAPVGMHIANGMY--GLILVEPKE-----GLPK---VDKEFYIVQ---GDFYTKGKKG--AQ------G 184 (327)
T ss_dssp -SCEEEEEECCCSSHHHHHHTTCE--EEEEEECTT-----CCCC---CSEEEEEEE---EEECBSSCTT--CC------E
T ss_pred -CCeEEEEEeCCCChhhhhhcceE--EEEEEecCC-----CCCC---CceEEEEEe---eeeeccCccc--cc------c
Confidence 58999999864210 11223 333333322 1121 111111100 0111110000 00 0
Q ss_pred ccccceEEEEecccCCCCCeEeEEECCeeecCCCCchhhhcccCCCCccccCCCCCCCCCCCcceeeEEEEccCCcEEEE
Q 009283 343 LINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEV 422 (538)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~P~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~ 422 (538)
... +.+.... ......+.|||+.+... ....++++.|++++|
T Consensus 185 ~~~----~~~~~~~--~~~~~~~~iNG~~~~~~--------------------------------~~~~l~v~~G~~vRl 226 (327)
T 1kbv_A 185 LQP----FDMDKAV--AEQPEYVVFNGHVGALT--------------------------------GDNALKAKAGETVRM 226 (327)
T ss_dssp EEC----BCHHHHH--HTCCSEEEETTSTTTTS--------------------------------GGGCEEEETTEEEEE
T ss_pred ccc----cChhHhc--cCCCceEEEcCcccCCC--------------------------------CceeEEeCCCCEEEE
Confidence 000 0000000 01123578999765210 012356788999999
Q ss_pred EEEcCCC-CCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhhh-
Q 009283 423 VFENPED-TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQ- 500 (538)
Q Consensus 423 ~l~N~~~-~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~- 500 (538)
.|.|.+. ..|+||||||.|+||+.+++. ..|.++||+.|.||+.+.|.|++++||.|++|||++.|.
T Consensus 227 RliN~~~~~~~~~~l~Gh~f~vi~~DG~~-----------~~p~~~d~l~l~pGer~dv~v~~~~pG~y~l~~h~~~~~~ 295 (327)
T 1kbv_A 227 YVGNGGPNLVSSFHVIGEIFDKVYVEGGK-----------LINENVQSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFRAF 295 (327)
T ss_dssp EEEEEESSCCEEEEEETCCBSEEEGGGSS-----------CEECSBSEEEECTTEEEEEEEEECSCEEEEEEESSTHHHH
T ss_pred EEECCCCCCceeEEEeCCEEEEEEcCCCc-----------CCCCceeEEEECCCCEEEEEEEeCCCeEEEEEeccccccc
Confidence 9999874 579999999999999997652 226789999999999999999999999999999999995
Q ss_pred hcceEEEEEEecCC
Q 009283 501 YLGQQFYLRVYSSA 514 (538)
Q Consensus 501 d~GMm~~~~V~~p~ 514 (538)
..||++.++|....
T Consensus 296 ~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 296 NKGALGQLKVEGAE 309 (327)
T ss_dssp HSSCEEEEEEESCC
T ss_pred cCCcEEEEEECCCC
Confidence 88999999997543
No 46
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.85 E-value=5.3e-23 Score=228.43 Aligned_cols=237 Identities=11% Similarity=0.100 Sum_probs=151.0
Q ss_pred CceEEEecCCEEEEEEEecCCCceEEEEEeCCeeEEEEEcCeecccceecEEEEcCCCeEEEEEEeCC---------CCc
Q 009283 200 ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ---------PPQ 270 (538)
Q Consensus 200 ~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~---------~~g 270 (538)
.|.|+++.|++++++|.|.... .+.+|.||..+.....||.+- ..-.|.||++++..+++++ .+|
T Consensus 198 GP~Ir~~~GD~v~v~~~N~l~~-~~siH~HG~~~~~~~~dG~~~-----~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~G 271 (770)
T 2r7e_B 198 GPYIRAEVEDNIMVTFRNQASR-PYSFYSSLISYEEDQRQGAEP-----RKNFVKPNETKTYFWKVQHHMAPTKDEFDCK 271 (770)
T ss_dssp CCCCCCCSSSCEEEEEECCSSS-CCCCCBTTCCCCCCSSSCTTT-----TSSCCCSSCEEEEECCCCSSSSCCSSCCSEE
T ss_pred CCeEEEEcCCEEEEEEEECCCC-CcceeecccccccccCCCCcC-----ccCccCCCCeEEEEEEecCccCCccCCCCCe
Confidence 6999999999999999999764 778888887665443357642 2346899999999999875 568
Q ss_pred ceEEEEEeecc---CCccceEEEEEecCCCCCCCCCCCCCCCccccchhh--hhh---h--hcccCCCCCCCCCCCCCCC
Q 009283 271 GYYIVISTRFT---SQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLE--QAR---S--LRRNLTASGPRPNPQGSYH 340 (538)
Q Consensus 271 ~y~i~~~~~~~---~~~~~~~ail~y~~~~~~~~~~~p~~P~~~~~~~~~--~~~---~--~~~~l~~~~~~~~p~~~~~ 340 (538)
+||.+.+.... ..++. +.|.+....... +....+..+.+..+. ... + +..++.... ..|. .+.
T Consensus 272 t~wYHsh~~~~~q~~~GL~--G~liV~~~~~~~--~~~~~~~~d~E~vl~~~~~de~~swy~~~~~~~~~--~~p~-~~~ 344 (770)
T 2r7e_B 272 AWAYSSDVDLEKDVHSGLI--GPLLVCHTNTLN--PAHGRQVTVQEFALFFTIFDETKSWYFTENMERNC--RAPC-NIQ 344 (770)
T ss_dssp EEEECCCSSSSHHHHTSCC--EEEEEECSTTSC--SSSCCCCSSEEEECCCCEECCSSSSCTTGGGSSCS--CCSS-CCC
T ss_pred eEEeeccCCcHHHHhCCce--eeEEECCCcccc--cccCCCccceEEEEEEeecCccccchhccchhhcc--cCcc-ccc
Confidence 99998876432 12233 333333322110 000001011110000 000 0 000000000 0000 000
Q ss_pred ccccccceEEEEecccCCCCCeEeEEECCeeecCCCCchhhhcccCCCCccccCCCCCCCCCCCcceeeEEEEccCCcEE
Q 009283 341 YGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFA 420 (538)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~P~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v 420 (538)
.. +. .+ ......|.|||..|. . ...++++.|++|
T Consensus 345 ~~----d~--~~------~~~~~~~~ING~~~~--~--------------------------------~~~l~v~~Ge~v 378 (770)
T 2r7e_B 345 ME----DP--TF------KENYRFHAINGYIMD--T--------------------------------LPGLVMAQDQRI 378 (770)
T ss_dssp SS----SS--SS------TTTSCEECTTSCTTT--T--------------------------------CCCCCCCSSSCE
T ss_pred cC----Cc--cc------cccCCccccCCccCC--C--------------------------------CCCeEEeCCCEE
Confidence 00 00 00 011234778886541 0 112456789999
Q ss_pred EEEEEcCCCC--CCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchh
Q 009283 421 EVVFENPEDT--LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWA 498 (538)
Q Consensus 421 ~~~l~N~~~~--~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~ 498 (538)
+|.|.|.+.. .||||||||.|+|++.++ .++||+.|+|++++.|+|++|+||.|+||||+++
T Consensus 379 r~rliN~g~~~~~H~fHlhGh~f~Vv~~dg----------------~~~Dtv~l~Pg~~~~v~~~ad~pG~w~~hcH~~~ 442 (770)
T 2r7e_B 379 RWYLLSMGSNENIHSIHFSGHVFTVRKKEE----------------YKMALYNLYPGVFETVEMLPSKAGIWRVECLIGE 442 (770)
T ss_dssp EEECCCCCSSSCCCEEEBSSCCEECCSSSC----------------CEESEEECCTTCCCEEEECCSSCBCCCBCCCSHH
T ss_pred EEEEEeCCCCcceEEEEEcCCEEEEEecCC----------------ceeeEEEECCCeEEEEEEEeCCCCceEEEecccc
Confidence 9999998753 799999999999998642 2799999999999999999999999999999999
Q ss_pred hhhcceEEEEEEe
Q 009283 499 RQYLGQQFYLRVY 511 (538)
Q Consensus 499 H~d~GMm~~~~V~ 511 (538)
|++.|||..|.|.
T Consensus 443 H~~~GM~~~~~V~ 455 (770)
T 2r7e_B 443 HLHAGMSTLFLVY 455 (770)
T ss_dssp HHTTBCCCCCCBC
T ss_pred ccccccccccccc
Confidence 9999999999985
No 47
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.84 E-value=5.3e-20 Score=186.79 Aligned_cols=259 Identities=10% Similarity=0.050 Sum_probs=151.7
Q ss_pred CCeEEEcCCCCCCceEEEecCCEEEEEEEecCCC-ceEEEEEeCCeeEEEEEcCeecccceecEEEEcCCCeEEEEEEeC
Q 009283 188 PDGLVINGRGSNANTFTVDQGKTYRFRISNVGIS-TSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRAD 266 (538)
Q Consensus 188 ~~~~liNG~~~~~p~~~v~~G~~~rlRliN~~~~-~~~~~~l~gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~ 266 (538)
...+++||+.. .|.|++++|+++++|+.|.+.+ ..|.+++++.. ..||.. +. . .|.||+++++.++++
T Consensus 52 ~~~~~~ng~~p-gP~i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~----~~~~~~--~~--~--~i~PG~~~~y~f~~~ 120 (333)
T 1mzy_A 52 LQAMTFDGSIP-GPLMIVHEGDYVELTLINPPENTMPHNIDFHAAT----GALGGG--GL--T--LINPGEKVVLRFKAT 120 (333)
T ss_dssp EEEEEETTBSS-CCEEEEETTCEEEEEEEECTTCCSCBCCEETTSC----SGGGGG--GG--C--CBCTTEEEEEEEECC
T ss_pred EEEEEECCccC-CCcEEecCCCEEEEEEEECCCCcccccceecCCC----CCCCCC--ce--e--EeCCCCEEEEEEECC
Confidence 35789999863 6999999999999999999642 24555555432 122221 11 2 399999999999998
Q ss_pred CCCcceEEEEEeec------cCCccceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhcccCCCCCCCCCCCCCCC
Q 009283 267 QPPQGYYIVISTRF------TSQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYH 340 (538)
Q Consensus 267 ~~~g~y~i~~~~~~------~~~~~~~~ail~y~~~~~~~~~~~p~~P~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~ 340 (538)
.+|+||++++... ....+.+.-++ ..... ...+.+.+...+.+..+. .. ++.+.. ...+.+.
T Consensus 121 -~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV--~~~~~-~~~~~~~p~~~d~e~~l~-l~--D~~~~~-----~~~g~~~ 188 (333)
T 1mzy_A 121 -RAGAFVYHCAPGGPMIPWHVVSGMAGCIMV--LPRDG-LKDHEGKPVRYDTVYYIG-ES--DHYIPK-----DEDGTYM 188 (333)
T ss_dssp -SCEEEEEECCCSTTHHHHHHHTTCEEEEEE--ECTTC-CBCTTSCBCCCSEEEEEE-EE--EECCCB-----CTTSCBC
T ss_pred -CCEEEEEeecCCcccchhhhhCCCEEEEEE--ccCcC-ccccccCCCccchheeee-ee--eeccCc-----ccccccc
Confidence 6999999997642 11233333333 32211 000111000011111000 00 111100 0000000
Q ss_pred -ccccccceEEEEecccCCCCCeEeEEECCeeecCCCCchhhhcccCCCCccccCCCCCCCCCCCcceeeEEEEccCCcE
Q 009283 341 -YGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGF 419 (538)
Q Consensus 341 -~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~P~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ 419 (538)
+........-.+.. ........|.|||+.+..+. ...++++.|++
T Consensus 189 ~~~~~~~~~~~~~~~--~~~~~~~~~~ING~~~~~~~--------------------------------~~~l~v~~Ger 234 (333)
T 1mzy_A 189 RFSDPSEGYEDMVAV--MDTLIPSHIVFNGAVGALTG--------------------------------EGALKAKVGDN 234 (333)
T ss_dssp CCSSHHHHHHHHHHH--HTTTCCSEEEETTSTTTTSG--------------------------------GGCEEEETTCE
T ss_pred ccccccccccchhHH--hhccCCcEEEECCcccccCC--------------------------------CcceEecCCCE
Confidence 00000000000000 00011246889997642100 11256788999
Q ss_pred EEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCC-ceeeEEeCCCCEEEEEEEccCcceeeeeecchh
Q 009283 420 AEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTI-SRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWA 498 (538)
Q Consensus 420 v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~-~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~ 498 (538)
++|++.|.+...|++++|+|.|+|++ + |.+. ..|. ++||+.|.|++.+.+.|.+++||.|+||||+++
T Consensus 235 ~Rl~n~~~~~~~~~h~i~~h~~~Vi~-d-G~~~---------~~p~~~~dtv~l~pGer~~v~v~a~~pG~y~~~ch~~~ 303 (333)
T 1mzy_A 235 VLFVHSQPNRDSRPHLIGGHGDLVWE-T-GKFH---------NAPERDLETWFIRGGTAGAALYKFLQPGVYAYVNHNLI 303 (333)
T ss_dssp EEEEEEESSSCBCEEEETCCEEEEET-T-CCTT---------SCCEEEESBCCBCTTEEEEEEEECCSCEEEEEEESSHH
T ss_pred EEEEECCCCCccccEEECCCCeEEEe-C-Cccc---------CCCccCcceEEECCCceEEEEEEcCCCEEEEEecChhh
Confidence 99888777655566667889899987 3 3221 1122 689999999999999999999999999999999
Q ss_pred hh-hcceEEEEEEecCC
Q 009283 499 RQ-YLGQQFYLRVYSSA 514 (538)
Q Consensus 499 H~-d~GMm~~~~V~~p~ 514 (538)
|+ +.|||+.|+|..+.
T Consensus 304 h~~~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 304 EAVHKGATAHVLVEGEW 320 (333)
T ss_dssp HHHTTCCEEEEEEESCC
T ss_pred hHhhCCCEEEEEEcCCC
Confidence 97 99999999998644
No 48
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.80 E-value=3.4e-19 Score=187.88 Aligned_cols=248 Identities=13% Similarity=0.064 Sum_probs=163.8
Q ss_pred CCeEEEcCCCCCCceEEEecCCEEEEEEEecCCC-ceEEEEEeCCeeEEEEEcCeecccceecEEEEcCCCeEEEEEEeC
Q 009283 188 PDGLVINGRGSNANTFTVDQGKTYRFRISNVGIS-TSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRAD 266 (538)
Q Consensus 188 ~~~~liNG~~~~~p~~~v~~G~~~rlRliN~~~~-~~~~~~l~gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~ 266 (538)
...+++||+.. .|.|+++.|++++||+.|.... ..+.+|+||+. ..||... ...|.||+++++.++++
T Consensus 48 ~~~~~~ng~~p-gp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg~~~~y~f~~~ 116 (442)
T 2zoo_A 48 YVFWSFGETVP-GSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPGHTSTFNFKAL 116 (442)
T ss_dssp EEEEEETTBSS-CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTTCEEEEEEECC
T ss_pred EEEEEECCcCC-CCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCCCEEEEEEEcC
Confidence 35799999863 6999999999999999999642 57889999975 3677542 23589999999999998
Q ss_pred CCCcceEEEEEeecc-CC-ccceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhcccCCCCCCCCCCCCCCCcccc
Q 009283 267 QPPQGYYIVISTRFT-SQ-VLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLI 344 (538)
Q Consensus 267 ~~~g~y~i~~~~~~~-~~-~~~~~ail~y~~~~~~~~~~~p~~P~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~ 344 (538)
.+|.||++++.... .+ .....+.+.+.... +.| ..+.+..+- .. ++....... . .
T Consensus 117 -~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~-----~~~---~~d~e~~l~-l~--d~~~~~~~~--~---------~ 173 (442)
T 2zoo_A 117 -NPGLYIYHCATAPVGMHIANGMYGLILVEPKE-----GLA---PVDREYYLV-QG--DFYTKGEFG--E---------A 173 (442)
T ss_dssp -SCEEEEEECCCSSHHHHHHTTCEEEEEEECTT-----CCC---CCSEEEEEE-EE--EECBSSCTT--C---------C
T ss_pred -CCeEEEEecCCCChHHHHhCccEEEEEEeCCC-----CCC---CCCceEEEE-ee--eeeccCccc--c---------c
Confidence 69999999853210 01 11234444444322 111 111111110 00 111110000 0 0
Q ss_pred ccceEEEEecccCCCCCeEeEEECCeeecCCCCchhhhcccCCCCccccCCCCCCCCCCCcceeeEEEEccCCcEEEEEE
Q 009283 345 NTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVF 424 (538)
Q Consensus 345 ~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~P~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~l 424 (538)
. ...+.+... .......+.|||+.+... ....+.++.|++++|.|
T Consensus 174 ~-~~~~~~~~~--~~~~~~~~liNG~~~~~~--------------------------------~~~~l~v~~G~~vrlrl 218 (442)
T 2zoo_A 174 G-LQPFDMAKA--IDEDADYVVFNGSVGSTT--------------------------------DENSLTAKVGETVRLYI 218 (442)
T ss_dssp E-EECBCHHHH--HTTCCSEEEETTSTTTTS--------------------------------GGGCEEEETTCEEEEEE
T ss_pred c-cccCChhHh--ccCCCCEEEECCCcCCCC--------------------------------CCCceEeCCCCEEEEEE
Confidence 0 000000000 001123577899764210 00125678899999999
Q ss_pred EcCCC-CCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhh-hhc
Q 009283 425 ENPED-TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWAR-QYL 502 (538)
Q Consensus 425 ~N~~~-~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H-~d~ 502 (538)
.|.+. ..|+||+|||.|.|++.+++. ..|.+.|++.|.|++...+.|++++||.|++|||.+.| .+.
T Consensus 219 iN~~~~~~~~~~i~g~~~~vi~~DG~~-----------~~p~~~~~~~l~pg~r~~v~v~~~~~G~y~~~~~~~~~~~~~ 287 (442)
T 2zoo_A 219 GNGGPNLVSSFHVIGEIFDTVYVEGGS-----------LKNHNVQTTLIPAGGAAIVEFKVEVPGTFILVDHSIFRAFNK 287 (442)
T ss_dssp EEEESSCCEEEEEETCCBSEEEGGGSS-----------CEECSBSEEEECTTEEEEEEEECCSCEEEEEEESSTHHHHTT
T ss_pred EeCCCCCceeeEEcCCEEEEEecCCcc-----------CCCccceEEEECCCeeEEEEEEcCCCCeEEEEeccccccccc
Confidence 99764 579999999999999997642 22678899999999999999999999999999999999 599
Q ss_pred ceEEEEEEecCCC
Q 009283 503 GQQFYLRVYSSAN 515 (538)
Q Consensus 503 GMm~~~~V~~p~~ 515 (538)
|||+.+.|...+.
T Consensus 288 g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 288 GALAMLKVEGPDD 300 (442)
T ss_dssp SCEEEEEEESCCC
T ss_pred CceEEEEecCCCC
Confidence 9999999975543
No 49
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.80 E-value=2.1e-18 Score=175.24 Aligned_cols=258 Identities=14% Similarity=0.167 Sum_probs=155.0
Q ss_pred CCeEEEcCCCCCCceEEEecCCEEEEEEEecCCC-ceEEEEEeCCeeEEEEEcCeecccceecEEEEcCCCeEEEEEEeC
Q 009283 188 PDGLVINGRGSNANTFTVDQGKTYRFRISNVGIS-TSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRAD 266 (538)
Q Consensus 188 ~~~~liNG~~~~~p~~~v~~G~~~rlRliN~~~~-~~~~~~l~gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~ 266 (538)
...+++||+.. .|.|+++.|+++++|+.|.... ..|.++++++.. +.||..+ . .|.||+++++.++++
T Consensus 53 ~~~~~~ng~~p-gP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~---~~~~~~~-----~--~i~pG~~~~y~f~~~ 121 (336)
T 1oe1_A 53 LQAMTFNGSMP-GPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG---ALGGAKL-----T--NVNPGEQATLRFKAD 121 (336)
T ss_dssp EEEEEETTBSS-CCCEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGG-----C--CBCTTEEEEEEEECC
T ss_pred EEEEEECCccC-CCeEEEcCCCEEEEEEEcCCCCCccccceECCCCC---CCCCcce-----E--EeCCCCEEEEEEECC
Confidence 35799999853 6999999999999999998652 578888988753 2233322 1 399999999999998
Q ss_pred CCCcceEEEEEeecc-----CCccceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhcccCCCCCCCCCCCCCCC-
Q 009283 267 QPPQGYYIVISTRFT-----SQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYH- 340 (538)
Q Consensus 267 ~~~g~y~i~~~~~~~-----~~~~~~~ail~y~~~~~~~~~~~p~~P~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~- 340 (538)
.+|+||++++.... ...+.+.-+++ .... ...+.+.+...+.+..+. .. ++.+.. ...+.+.
T Consensus 122 -~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~--~~~~-~~~~~~~~~~~D~e~~l~-~~--D~~~~~-----~~~g~~~~ 189 (336)
T 1oe1_A 122 -RSGTFVYHCAPEGMVPWHVVSGMSGTLMVL--PRDG-LKDPQGKPLHYDRAYTIG-EF--DLYIPK-----GPDGKYKD 189 (336)
T ss_dssp -SCEEEEEECCCTTCHHHHHHTTCEEEEEEE--CTTC-CBCTTSCBCCCSEEEEEE-EE--EECCCB-----CTTSSBCC
T ss_pred -CCeEEEEecCCCCchhHHHhCCCeEEEEEe--cCcC-CcccccCcccCCceeEee-ee--eeeecc-----ccCCceee
Confidence 59999999986321 12333333333 2211 000111110011111000 00 011100 0000000
Q ss_pred cccc-ccceEEEEecccCCCCCeEeEEECCeeecCCCCchhhhcccCCCCccccCCCCCCCCCCCcceeeEEEEccCCcE
Q 009283 341 YGLI-NTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGF 419 (538)
Q Consensus 341 ~~~~-~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~P~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ 419 (538)
+... ..... .+.... ......+.|||+.+... +...+.++.|++
T Consensus 190 ~~~~~~~~~~-~~~~~~--~~~~~~~liNG~~~~~~--------------------------------~~~~l~v~~Ger 234 (336)
T 1oe1_A 190 YATLAESYGD-TVQVMR--TLTPSHIVFNGKVGALT--------------------------------GANALTAKVGET 234 (336)
T ss_dssp CSSTGGGHHH-HHHHHH--TTCCSEEEETTSTTTTS--------------------------------GGGCEEEETTCE
T ss_pred cccccccccc-hhhHhh--cCCCCEEEECCeeccCC--------------------------------CCcceEcCCCCE
Confidence 0000 00000 000000 00123577888764210 012356788999
Q ss_pred EEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCC-CceeeEEeCCCCEEEEEEEccCcceeeeeecchh
Q 009283 420 AEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDT-ISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWA 498 (538)
Q Consensus 420 v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p-~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~ 498 (538)
++|+..+.+...+++++|||.|.|+. + |.+. ..| .+.||+.|++|+.+.+.+.+++||.|+||||.+.
T Consensus 235 vRlin~~~~~~~~~~~i~gh~~~Vi~-D-G~~~---------~p~~~~~dtv~i~pGer~dvlv~~~~pG~y~~~~h~~~ 303 (336)
T 1oe1_A 235 VLLIHSQANRDTRPHLIGGHGDWVWE-T-GKFA---------NPPQRDLETWFIRGGSAGAALYTFKQPGVYAYLNHNLI 303 (336)
T ss_dssp EEEEEEESSSCBCEEETTCCEEEEET-T-CCTT---------SCCEEEESBCCBCTTEEEEEEEECCSCEEEEEEESSHH
T ss_pred EEEEecCCCCccceEEECCcCceEeC-C-CcCc---------CCccccceEEEECCCCcEEEEEEcCCCceEEEEechhh
Confidence 99876666656677778999999996 3 3221 112 2579999999999999999999999999999999
Q ss_pred hh-hcceEEEEEEecCC
Q 009283 499 RQ-YLGQQFYLRVYSSA 514 (538)
Q Consensus 499 H~-d~GMm~~~~V~~p~ 514 (538)
|. +.||++.|+|.+..
T Consensus 304 ~~~~~G~~~~~~V~~~~ 320 (336)
T 1oe1_A 304 EAFELGAAGHIKVEGKW 320 (336)
T ss_dssp HHHTTSCEEEEEEESCC
T ss_pred ccccCCCeEEEEECCCC
Confidence 86 99999999997543
No 50
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.66 E-value=4.2e-15 Score=156.17 Aligned_cols=230 Identities=13% Similarity=0.135 Sum_probs=161.3
Q ss_pred eEEEEEEEEEEEecC------------CCeeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCC-CCceeeeccccCCCCC
Q 009283 26 YRFFNWNVTYGDIYP------------LGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALD-EPFLISWNGVQQRRNS 92 (538)
Q Consensus 26 ~~~~~l~~~~~~~~~------------~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~~~ 92 (538)
.+++.|.+++-.... .|.....+++||+. .|.|+|++| ++++|+.|... ....+|++|..... -
T Consensus 146 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~v-i 222 (439)
T 2xu9_A 146 AEEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYL-I 222 (439)
T ss_dssp SEEEEEEEEEECEETTEECCCCHHHHHHCCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEE-E
T ss_pred CCcEEEEEEeeeeCCCCcCCCCccccccCCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEE-E
Confidence 456666665543221 13344689999996 699999999 99999999976 46789999976543 3
Q ss_pred CCCCCCC------CCCCCCCCCeEEEEEEecCCccceeeecCchhh--hh-cce--------------eeEEEEecC-CC
Q 009283 93 WQDGVYG------TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFH--KA-AGG--------------YGGIKIASR-PL 148 (538)
Q Consensus 93 ~~DG~~~------tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q--~~-~Gl--------------~G~liV~~~-~~ 148 (538)
..||.+. ....|.|||+++..+++. ++|.||++|+.... .. .|| ....+++-. ..
T Consensus 223 ~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~~-~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 301 (439)
T 2xu9_A 223 AADGGFLEEPLEVSELLLAPGERAEVLVRLR-KEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNP 301 (439)
T ss_dssp EETTEEEEEEEEESCEEECTTCEEEEEEECC-SSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSC
T ss_pred ecCCCCCCCceEeceEEECCceeEEEEEEcC-CCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCC
Confidence 6799752 235699999999999995 69999999974211 10 122 112222211 11
Q ss_pred CCCCCC-------CCC---CceEEEEeeecccChhhHHHHhccCCCCCCCCeEEEcCCCCCC--ceEEEecCCEEEEEEE
Q 009283 149 IPVPFD-------PPA---GDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNA--NTFTVDQGKTYRFRIS 216 (538)
Q Consensus 149 ~~~~~~-------~~~---~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~--p~~~v~~G~~~rlRli 216 (538)
.+.+.+ ... .+..+.+.- +. .+..++|||+.+.. +.+.++.|++++|+|.
T Consensus 302 ~~~~~p~~l~~~~~l~~~~~~r~~~l~~---------------~~---~g~~~~iNg~~~~~~~~~~~~~~g~~~~~~~~ 363 (439)
T 2xu9_A 302 KPLPLPKALSPFPTLPAPVVTRRLVLTE---------------DM---MAARFFINGQVFDHRRVDLKGQAQTVEVWEVE 363 (439)
T ss_dssp CCCCCCSCCCCCCCCCCCSEEEEEEEEE---------------EG---GGTEEEETTBCCCTTCCCEEECTTCEEEEEEE
T ss_pred ccccCcccCCCcccCCCCCcceEEEEEe---------------ec---cCceEeECCEECCCCCCceecCCCCEEEEEEE
Confidence 111110 000 000111100 00 11368999998743 4589999999999999
Q ss_pred ecCCCceEEEEEeCCeeEEEEEcCeec-ccceecEEEEcCCCeEEEEEEeCCCCcceEEEEEee
Q 009283 217 NVGISTSINFRIQGHKMLLVEVEGTHT-LQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTR 279 (538)
Q Consensus 217 N~~~~~~~~~~l~gh~~~via~DG~~~-~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 279 (538)
|.+.. .|.||||||.|+|++.+|... +|...|++.+.||+++.+.++++ .||.|.++|+..
T Consensus 364 N~~~~-~HP~HLHG~~F~Vl~~~g~~~~~p~~rDTv~v~p~~~v~i~f~ad-npG~w~~HCHil 425 (439)
T 2xu9_A 364 NQGDM-DHPFHLHVHPFQVLSVGGRPFPYRAWKDVVNLKAGEVARLLVPLR-EKGRTVFHCHIV 425 (439)
T ss_dssp ECSSS-CEEEEESSCCBEEEEETTEECSSCCCBSEEEECTTCEEEEEEECC-SCEEEEEEESSH
T ss_pred cCCCC-CCCceeCCCcEEEEeeCCCCCCCCCCeEEEEeCCCCEEEEEEEcC-CCCCEEEECCcc
Confidence 99865 799999999999999999876 47889999999999999999987 899999999864
No 51
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.65 E-value=5.7e-15 Score=155.50 Aligned_cols=234 Identities=16% Similarity=0.148 Sum_probs=152.5
Q ss_pred eEEEEEEEEEEEecCCC-----------eeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCC-CCceeee-ccccCCCCC
Q 009283 26 YRFFNWNVTYGDIYPLG-----------VKQQGILINGQFPGPSIEAVTNDNLIISVFNALD-EPFLISW-NGVQQRRNS 92 (538)
Q Consensus 26 ~~~~~l~~~~~~~~~~G-----------~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~-~~~siH~-HG~~~~~~~ 92 (538)
.+++.|.+++-....+| .....+++||+. .|+|+|++| ++++|+.|... ....+|+ ||..... -
T Consensus 152 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~v-i 228 (451)
T 2uxt_A 152 VDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHV-I 228 (451)
T ss_dssp TTEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEE-E
T ss_pred CceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEE-E
Confidence 45777777766554433 334689999984 699999999 99999999976 4678999 8865443 3
Q ss_pred CCCCCC----C--CCCCCCCCCeEEEEEEecCCccceeeecCchhhhhcceee-----------EE-EEecCCCCCCCCC
Q 009283 93 WQDGVY----G--TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYG-----------GI-KIASRPLIPVPFD 154 (538)
Q Consensus 93 ~~DG~~----~--tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G-----------~l-iV~~~~~~~~~~~ 154 (538)
..||.+ . .+..|.|||++++.++++ +.|+||++++........+.| ++ -+........+
T Consensus 229 ~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~-- 305 (451)
T 2uxt_A 229 SGDQGFLPAPVSVKQLSLAPGERREILVDMS-NGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLV-- 305 (451)
T ss_dssp ECSSSEEEEEEEESSEEECTTCEEEEEEECT-TCCCEEEEC----------------CCCCSCCEEEEEEECSCCC----
T ss_pred EeCCCccCCceEeceEEECceeEEEEEEEeC-CCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCc--
Confidence 589964 2 456799999999999995 689999999864332111111 11 11111100000
Q ss_pred CCCCceEEEEeeecccCh-hhHHHHhccCCCCCCCCeEEEcCCCCC--CceEEEecCCEEEEEEEecCCCceEEEEEeCC
Q 009283 155 PPAGDFTILAGDWYKKNH-TDLKAILDSGSDLPFPDGLVINGRGSN--ANTFTVDQGKTYRFRISNVGISTSINFRIQGH 231 (538)
Q Consensus 155 ~~~~e~~l~l~d~~~~~~-~~~~~~~~~~~~~~~~~~~liNG~~~~--~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh 231 (538)
..+.+..|..+..... ......+.-. ..++|||+.+. .+.+.++.|++++|+|+|. ..|.||||||
T Consensus 306 --~~~~p~~L~~~~~~~~~~~~~~~~~l~------~~~~iNg~~f~~~~~~~~~~~G~~~~~~l~N~---~~HP~HLHGh 374 (451)
T 2uxt_A 306 --TDSLPMRLLPTEIMAGSPIRSRDISLG------DDPGINGQLWDVNRIDVTAQQGTWERWTVRAD---EPQAFHIEGV 374 (451)
T ss_dssp ----CCCSCSSSSCCCCCCCSEEEEEEEC------SSSSBTTBCCCTTCCCEEEETTCEEEEEEEEE---EEEEEEETTC
T ss_pred --cccCccccCCCCCCCCCCcceEEEEEe------eEEEECCEeCCCCCCcEEcCCCCEEEEEEECC---CCcCeEECCc
Confidence 0000000000000000 0000000000 04679999874 3468999999999999997 4799999999
Q ss_pred eeEEEEEcCeec---ccceecEEEEcCCCeEEEEEEeCCCCcc----eEEEEEee
Q 009283 232 KMLLVEVEGTHT---LQNTYDSLDIHLGQSYSVLVRADQPPQG----YYIVISTR 279 (538)
Q Consensus 232 ~~~via~DG~~~---~p~~~~~v~l~pgeR~dv~v~~~~~~g~----y~i~~~~~ 279 (538)
.|+|++.||.+. +|..+|++.+ |+++.+.++++ .+|. |.++|+..
T Consensus 375 ~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~d-npg~~~g~w~~HCHil 426 (451)
T 2uxt_A 375 MFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFG-QPSWAHFPFYFNSQTL 426 (451)
T ss_dssp EEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECC-SCCBTTBCEEEEESSH
T ss_pred eEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeC-CCCCCCCceEEeCCch
Confidence 999999999876 3678999999 99999999998 5565 99999864
No 52
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.64 E-value=5.4e-17 Score=135.89 Aligned_cols=90 Identities=20% Similarity=0.296 Sum_probs=71.9
Q ss_pred CcCcCceEEEecCCEEEEEEEeCCCCCceeeeccccCCCC--CCCCCCCCCCCCCCCCCeEEEEEEecCCccceeeecCc
Q 009283 52 GQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRN--SWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSL 129 (538)
Q Consensus 52 g~~pgP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~--~~~DG~~~tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~ 129 (538)
-+|++|+|++++||+|+ ++|..+.++++||||..++.. ..+||.+.+++.|.||++++|.|++++++|+||||||
T Consensus 14 ~~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~- 90 (105)
T 3cvb_A 14 FQFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCA- 90 (105)
T ss_dssp SCEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEECT-
T ss_pred cEEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCcccccccccccccccccCCCCeEEEEEecCCCCeeEEEEeC-
Confidence 35788999999999975 679988999999999865421 0123322245679999999999998558999999999
Q ss_pred hhhhhcceeeEEEEec
Q 009283 130 AFHKAAGGYGGIKIAS 145 (538)
Q Consensus 130 ~~q~~~Gl~G~liV~~ 145 (538)
.|..+||.|.|+|++
T Consensus 91 -~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 91 -PHRGAGMVGKITVEG 105 (105)
T ss_dssp -TTGGGTCEEEEEECC
T ss_pred -CchhcCCEEEEEEcC
Confidence 677889999999974
No 53
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.58 E-value=6.7e-14 Score=149.99 Aligned_cols=227 Identities=15% Similarity=0.169 Sum_probs=153.0
Q ss_pred eEEEEEcCcCc---------CceEEEecCCEEEEEEEeCCC-CCceeeeccccCCCCCCCCCCCC-----CCCCCCCCCe
Q 009283 45 QQGILINGQFP---------GPSIEAVTNDNLIISVFNALD-EPFLISWNGVQQRRNSWQDGVYG-----TNCPIPPGKN 109 (538)
Q Consensus 45 ~~~~~~Ng~~p---------gP~i~v~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~~~~~DG~~~-----tq~~i~pG~~ 109 (538)
...+++||+.. -|+|+|++|+++++|+.|... ....+|++|..... -..||.+. ....|.|||+
T Consensus 191 ~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgqR 269 (521)
T 1v10_A 191 PDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTV-IEVDGVSHQPLTVDSLTIFAGQR 269 (521)
T ss_dssp CSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCE
T ss_pred CCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEE-EecCCccccceeeeeEEEcccce
Confidence 35789999743 189999999999999999976 46789999876543 36899752 3356999999
Q ss_pred EEEEEEecCCccceeeecCchh---hhhcceeeEEEEecCCCCCCCCCCCCCceEEEEeeecccCh------h-----hH
Q 009283 110 FTYVLQVKDQIGSYFYFPSLAF---HKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNH------T-----DL 175 (538)
Q Consensus 110 ~~Y~f~~~~~~Gt~wYH~H~~~---q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~------~-----~~ 175 (538)
++..+++++.+|.||.+++... ....|+..+++.........+..... +. ..+.+...... . ..
T Consensus 270 ~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~-~~-~~~~~~~l~p~~~~~~p~~~~~~~~ 347 (521)
T 1v10_A 270 YSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQN-SG-TALNEANLIPLINPGAPGNPVPGGA 347 (521)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCC-CS-CBCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCC-cc-cccchhhcccCCcccCCCcccCCcc
Confidence 9999999655799999998531 23334544555443222111110000 00 00000000000 0 00
Q ss_pred HH--HhccCCCCCCCCeEEEcCCCCC-----------------------CceEEEecCCEEEEEEEecCCCceEEEEEeC
Q 009283 176 KA--ILDSGSDLPFPDGLVINGRGSN-----------------------ANTFTVDQGKTYRFRISNVGISTSINFRIQG 230 (538)
Q Consensus 176 ~~--~~~~~~~~~~~~~~liNG~~~~-----------------------~p~~~v~~G~~~rlRliN~~~~~~~~~~l~g 230 (538)
.. .+..+.. .....|.|||+.+. .+.+.++.|++++++++| ...|.|||||
T Consensus 348 ~~~~~l~~~~~-~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N---~~~HP~HLHG 423 (521)
T 1v10_A 348 DINLNLRIGRN-ATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG---GGNHPFHLHG 423 (521)
T ss_dssp SEEEECCEECC-SSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC---CBSCEEEESS
T ss_pred eEEEEEEEecC-CceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC---CCCCCEEEcc
Confidence 00 0000000 01126789999863 145889999999999999 3479999999
Q ss_pred CeeEEEEEcCee----cccceecEEEE-cCCCeEEEEEEeCCCCcceEEEEEee
Q 009283 231 HKMLLVEVEGTH----TLQNTYDSLDI-HLGQSYSVLVRADQPPQGYYIVISTR 279 (538)
Q Consensus 231 h~~~via~DG~~----~~p~~~~~v~l-~pgeR~dv~v~~~~~~g~y~i~~~~~ 279 (538)
|.|+|++.+|.. .+|...|++.+ .||+++.+.++++ .||.|.++++..
T Consensus 424 h~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aD-NPG~W~~HCHi~ 476 (521)
T 1v10_A 424 HNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTD-NPGPWFLHCHID 476 (521)
T ss_dssp CCEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECC-SCEEEEEEESCH
T ss_pred ceEEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeC-CCeeEEEeeChH
Confidence 999999999875 35888999999 7999999999998 799999999874
No 54
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.58 E-value=5.5e-15 Score=145.56 Aligned_cols=99 Identities=19% Similarity=0.289 Sum_probs=84.9
Q ss_pred EEEcCcC--cCceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCC-------C--CCCCCCCCCeEEEEEEe
Q 009283 48 ILINGQF--PGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVY-------G--TNCPIPPGKNFTYVLQV 116 (538)
Q Consensus 48 ~~~Ng~~--pgP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~-------~--tq~~i~pG~~~~Y~f~~ 116 (538)
|+|||+. ++|.|++++||+|+++|.|.....+++||||...... .||.. . ....|.||++++|.|.+
T Consensus 157 ~~iNG~~~~~~p~i~v~~G~~vri~l~N~~~~~Hp~HlHG~~f~v~--~~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~ 234 (276)
T 3kw8_A 157 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIA 234 (276)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEET
T ss_pred cccceecccCCCCEEEecCCEEEEEEecCCCcceeEEEccceeEEe--ccCccCCCcccccCCccEEeCCCceEEEEEEe
Confidence 7999997 8999999999999999999999999999999765432 35431 1 33569999999999998
Q ss_pred cC--CccceeeecCchhhhhcceeeEEEEecCCC
Q 009283 117 KD--QIGSYFYFPSLAFHKAAGGYGGIKIASRPL 148 (538)
Q Consensus 117 ~~--~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~ 148 (538)
.+ .+|+||||||...|...||+|.++|.+++.
T Consensus 235 ~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 235 GEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred ccCCCCCeEEEECCCchHhhCCCeEEEEEeCCCC
Confidence 42 599999999999999999999999999765
No 55
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.58 E-value=9e-14 Score=148.41 Aligned_cols=248 Identities=13% Similarity=0.125 Sum_probs=161.5
Q ss_pred EEEEEEEEEEecCCCe-----eeEEEEEcCcCc--------CceEEEecCCEEEEEEEeCCC-CCceeeeccccCCCCCC
Q 009283 28 FFNWNVTYGDIYPLGV-----KQQGILINGQFP--------GPSIEAVTNDNLIISVFNALD-EPFLISWNGVQQRRNSW 93 (538)
Q Consensus 28 ~~~l~~~~~~~~~~G~-----~~~~~~~Ng~~p--------gP~i~v~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~~~~ 93 (538)
++.|.+++-....++. ....+++||+.. .|+|+|++|+++++|+.|... ....+|++|..... -.
T Consensus 143 e~~l~l~Dw~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~v-i~ 221 (503)
T 1hfu_A 143 NTIITLADWYHIPAPSIQGAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTI-IE 221 (503)
T ss_dssp TSEEEEEEECSSCGGGCC---CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EE
T ss_pred eEEEEEcccccCChHHhcCCCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEE-Ee
Confidence 4556665544333332 245789999753 289999999999999999975 46789998876543 36
Q ss_pred CCCCCC-----CCCCCCCCCeEEEEEEecCCccceeeecCch--hh-----hhcceeeEEEEecCCCCCCCCCCCCCceE
Q 009283 94 QDGVYG-----TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLA--FH-----KAAGGYGGIKIASRPLIPVPFDPPAGDFT 161 (538)
Q Consensus 94 ~DG~~~-----tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~--~q-----~~~Gl~G~liV~~~~~~~~~~~~~~~e~~ 161 (538)
.||.+. ....|.|||+++..+++.+.+|.||.+++.. .+ ...|+..+++.........+......+.
T Consensus 222 ~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~- 300 (503)
T 1hfu_A 222 VDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNP- 300 (503)
T ss_dssp ETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSC-
T ss_pred ccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCcc-
Confidence 899752 2345899999999999965579999999843 11 2344444555443221111110000000
Q ss_pred EEEeeecccCh--hhH---------HHHhccCCCCCCCCeEEEcCCCCCC-----------------------ceEEEec
Q 009283 162 ILAGDWYKKNH--TDL---------KAILDSGSDLPFPDGLVINGRGSNA-----------------------NTFTVDQ 207 (538)
Q Consensus 162 l~l~d~~~~~~--~~~---------~~~~~~~~~~~~~~~~liNG~~~~~-----------------------p~~~v~~ 207 (538)
..+.+...... ... ...+..... .....++|||+.+.. ..+.++.
T Consensus 301 ~~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~-~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~ 379 (503)
T 1hfu_A 301 AQLNEADLHALIDPAAPGIPTPGAADVNLRFQLG-FSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPR 379 (503)
T ss_dssp CBCCGGGCBBSSSCSCSSCSSTTCSSEEEECCEE-EETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECS
T ss_pred CCCccccccccCccCCCCcccCCcceEEEEEEee-ccCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccC
Confidence 00001000000 000 000000000 011268899998632 3578999
Q ss_pred CCEEEEEEEecCCCceEEEEEeCCeeEEEEEcCeec----ccceecEEEE-cCCCeEEEEEEeCCCCcceEEEEEee
Q 009283 208 GKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHT----LQNTYDSLDI-HLGQSYSVLVRADQPPQGYYIVISTR 279 (538)
Q Consensus 208 G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~----~p~~~~~v~l-~pgeR~dv~v~~~~~~g~y~i~~~~~ 279 (538)
|++++++++|......|.||||||.|+|++.+|... +|...|++.| .||+++.+.++++ .||.|.++++..
T Consensus 380 g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~ad-nPG~W~~HCHil 455 (503)
T 1hfu_A 380 NQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTD-NPGPWFFHCHIE 455 (503)
T ss_dssp SCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECC-SCEEEEEEESSH
T ss_pred CCEEEEEEECCCCCCCCCEEEecceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcC-CCeeeeEecCch
Confidence 999999999544345899999999999999998753 5788999999 7999999999998 899999999864
No 56
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.48 E-value=7.2e-13 Score=140.58 Aligned_cols=232 Identities=15% Similarity=0.138 Sum_probs=151.8
Q ss_pred eeEEEEEcCcC---------cCceEEEecCCEEEEEEEeCCC-CCceeeeccccCCCCCCCCCCCC-----CCCCCCCCC
Q 009283 44 KQQGILINGQF---------PGPSIEAVTNDNLIISVFNALD-EPFLISWNGVQQRRNSWQDGVYG-----TNCPIPPGK 108 (538)
Q Consensus 44 ~~~~~~~Ng~~---------pgP~i~v~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~~~~~DG~~~-----tq~~i~pG~ 108 (538)
....+++||+- +-|.|+|++|+++++|+.|... ....+|++|..... -..||.+. ....|.|||
T Consensus 167 ~~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGq 245 (495)
T 3t6v_A 167 TADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTI-IETDGVDSQELTVDEIQIFAAQ 245 (495)
T ss_dssp CCSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTC
T ss_pred CCcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEeCCcccCCEEeeeEEEcCce
Confidence 34689999962 3478999999999999999864 56788998876443 36899853 234599999
Q ss_pred eEEEEEEecCCccceeeecCch---hhhhcceeeEEEEecCCCCCCCCCCCCC-ceEEEEeeecccChhh----------
Q 009283 109 NFTYVLQVKDQIGSYFYFPSLA---FHKAAGGYGGIKIASRPLIPVPFDPPAG-DFTILAGDWYKKNHTD---------- 174 (538)
Q Consensus 109 ~~~Y~f~~~~~~Gt~wYH~H~~---~q~~~Gl~G~liV~~~~~~~~~~~~~~~-e~~l~l~d~~~~~~~~---------- 174 (538)
+++..+++.+.+|.||.++... .....|...+++.........|...... ... .+.+..+.....
T Consensus 246 R~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~-~~~~~~L~p~~~~~~p~~~~~~ 324 (495)
T 3t6v_A 246 RYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHTK-CLIETDLHPLSRNGVPGNPHQG 324 (495)
T ss_dssp EEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCSS-BCCGGGCCBSSCCCCSSCSSTT
T ss_pred EEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCcc-ccccccccccccccCCCccCCC
Confidence 9999999965569999998642 1222334344554443221111100000 000 000111000000
Q ss_pred -HHHHhccCCCCCCCCeEEEcCCCCC-----------------------CceEEEecCCEEEEEEEecCCCceEEEEEeC
Q 009283 175 -LKAILDSGSDLPFPDGLVINGRGSN-----------------------ANTFTVDQGKTYRFRISNVGISTSINFRIQG 230 (538)
Q Consensus 175 -~~~~~~~~~~~~~~~~~liNG~~~~-----------------------~p~~~v~~G~~~rlRliN~~~~~~~~~~l~g 230 (538)
....+... ....+..|+|||+.+. .+.+.++.|++|+|.|.|......|.||+||
T Consensus 325 ~~d~~~~l~-~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHG 403 (495)
T 3t6v_A 325 GADCNLNLS-LGFACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHG 403 (495)
T ss_dssp CSSEEEECC-EEEETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETT
T ss_pred CCcEEEEEE-EEecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcceeecC
Confidence 00000000 0001236889998752 1248999999999999843333489999999
Q ss_pred CeeEEEEEcCeec----ccceecEEEEcC-CCeEEEEEEeCCCCcceEEEEEee
Q 009283 231 HKMLLVEVEGTHT----LQNTYDSLDIHL-GQSYSVLVRADQPPQGYYIVISTR 279 (538)
Q Consensus 231 h~~~via~DG~~~----~p~~~~~v~l~p-geR~dv~v~~~~~~g~y~i~~~~~ 279 (538)
|.|+|++.+|... .|...|++.+.+ |+...+.++++ .||.|.++++..
T Consensus 404 h~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~ad-nPG~W~~HCHi~ 456 (495)
T 3t6v_A 404 HDFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTD-NPGPWFLHCHID 456 (495)
T ss_dssp CCEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECC-SCEEEEEEESCH
T ss_pred CcEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcC-CCeeEEEEecch
Confidence 9999999988654 588899999997 99999999998 899999999864
No 57
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.47 E-value=2.2e-13 Score=121.52 Aligned_cols=98 Identities=16% Similarity=0.243 Sum_probs=73.1
Q ss_pred CeeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCC------CCCCC--CCCCCCCC--eEE
Q 009283 42 GVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQD------GVYGT--NCPIPPGK--NFT 111 (538)
Q Consensus 42 G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~D------G~~~t--q~~i~pG~--~~~ 111 (538)
|...+.+.++|. ++|+|+|++||+|+|+++|... ...|.+.+...+.++.+ ..+.+ ...|.||+ +++
T Consensus 47 ~~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t 123 (154)
T 2cal_A 47 GFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTD 123 (154)
T ss_dssp TSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEE
T ss_pred CCccccccccCC-CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEEE
Confidence 444444556665 6799999999999999999732 44677777654433322 11110 12689999 999
Q ss_pred EEEEecCCccceeeecCchhhhhcceeeEEEEe
Q 009283 112 YVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIA 144 (538)
Q Consensus 112 Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 144 (538)
|.|++ ++|+||||||...|..+||.|.|+|+
T Consensus 124 ~tft~--~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 124 FTWHP--TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEECC--CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEE--CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 99997 79999999999899999999999984
No 58
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.46 E-value=2.4e-12 Score=135.76 Aligned_cols=238 Identities=15% Similarity=0.154 Sum_probs=158.4
Q ss_pred EEEEEEEEEEEecCCCe-------------eeEEEEEcCcCcCceEEEecCCEEEEEEEeCCC-CCceeeeccccCCCCC
Q 009283 27 RFFNWNVTYGDIYPLGV-------------KQQGILINGQFPGPSIEAVTNDNLIISVFNALD-EPFLISWNGVQQRRNS 92 (538)
Q Consensus 27 ~~~~l~~~~~~~~~~G~-------------~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~~~ 92 (538)
.+| |.++......+|. ....+++||+. .|+|.|++|+ ++|+.|... ....+|++|..... -
T Consensus 181 ~~~-l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~-~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~v-I 255 (481)
T 3zx1_A 181 EKD-LMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQF-KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFIL-V 255 (481)
T ss_dssp EEE-EEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEE-SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEE-E
T ss_pred cee-EEEEEEeccCCCccccccchhhccCCcCCEEEECCcc-CceEEecCCC--EEEEEecCCCeEEEEEECCCceEE-E
Confidence 344 6666655444442 23578999995 6899999999 999999975 66889999976443 4
Q ss_pred CCCCCC----C--CCCCCCCCCeEEEEEEecCCccceeeecCchhhhhccee----------eEEEEecCC-CCCC----
Q 009283 93 WQDGVY----G--TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGY----------GGIKIASRP-LIPV---- 151 (538)
Q Consensus 93 ~~DG~~----~--tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~----------G~liV~~~~-~~~~---- 151 (538)
+.||.. . ....|.|||+++..++++ +.|+|..-++.... .|+. .-+-+.... ..+.
T Consensus 256 a~DGg~~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~lP~~l~~ 332 (481)
T 3zx1_A 256 GTDGGLIEKTIYKEELFLSPASRVEVLIDAP-KDGNFKLESAYYDR--DKMMVKEEPNTLFLANINLKKENVELPKNLKI 332 (481)
T ss_dssp EETTEEEEEEEEESSEEECTTCEEEEEEECS-SCEEEEEEECCCCC--CCSSCCCCCCCEEEEEEEEECCCCCCCSCSCC
T ss_pred EcCCCccCCceEeCeEEECCccEEEEEEEcC-CCcEEEEEEecccc--cCccccCCCCceeEEEEecCCCCccCCccccC
Confidence 689742 2 345699999999999995 67887776653211 1111 111122111 0010
Q ss_pred --CCCCCCCceEEEEeeecccChhhHHHHhccCCCCC----CCCeEEEcCCCCC--CceEEEecCCEEEEEEEecCCCce
Q 009283 152 --PFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLP----FPDGLVINGRGSN--ANTFTVDQGKTYRFRISNVGISTS 223 (538)
Q Consensus 152 --~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~----~~~~~liNG~~~~--~p~~~v~~G~~~rlRliN~~~~~~ 223 (538)
+.+..+....+.++....+ .. .+....... ....++|||+.+. .+.++++.|++++|+|.|.+.. .
T Consensus 333 ~~~~~~~~~~r~~~l~~~~~~----~~-~~~~~~~~~~~~~~~~~~~iNG~~~~~~~~~~~~~~G~~v~w~l~N~~~~-~ 406 (481)
T 3zx1_A 333 FKPSEEPKEFKEIIMSEDHMQ----MH-GMMGKSEGELKIALASMFLINRKSYDLKRIDLSSKLGVVEDWIVINKSHM-D 406 (481)
T ss_dssp CCCCCCCCEEEEEEEEECCST----TT-TGGGCCHHHHHHHHHTTEEETTBCCCTTCCCEEEETTCCEEEEEEECSSS-C
T ss_pred CCCCCCCCcEEEEEEeccchh----cc-cccccccccccccccceeEECCEeCCCCCceEEeCCCCEEEEEEEcCCCC-c
Confidence 0111122233333321100 00 000000000 0124899999873 4779999999999999997765 8
Q ss_pred EEEEEeCCeeEEEEE--cCeecc---cceecEEEEcCCCeEEEEEEeCCCCcceEEEEEee
Q 009283 224 INFRIQGHKMLLVEV--EGTHTL---QNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTR 279 (538)
Q Consensus 224 ~~~~l~gh~~~via~--DG~~~~---p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 279 (538)
|.||||||.|+|++. ||.... +...|++.|.|||+..|.++++ .+|.|.+.|+..
T Consensus 407 Hp~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~~~~d-~pG~w~~HCHil 466 (481)
T 3zx1_A 407 HPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQD-FKGLRMYHCHIL 466 (481)
T ss_dssp EEEEETTCCEEEEEEEETTEEEECSSCCEESEEEECTTCEEEEEECCC-SCEEEEEEESSH
T ss_pred eeEEEeccEEEEEEecccCCCCCcccCcccceEEECCCCEEEEEEEcC-CCeeEEEEcCCh
Confidence 999999999999999 998764 4679999999999999999997 899999999764
No 59
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.44 E-value=8.2e-12 Score=133.97 Aligned_cols=229 Identities=11% Similarity=0.148 Sum_probs=148.4
Q ss_pred eEEEEEcCcCcCceEEEecCCEEEEEEEeCCC-CCceeeeccccCCCCCCCCCCCC-----CCCCCCCCCeEEEEEEecC
Q 009283 45 QQGILINGQFPGPSIEAVTNDNLIISVFNALD-EPFLISWNGVQQRRNSWQDGVYG-----TNCPIPPGKNFTYVLQVKD 118 (538)
Q Consensus 45 ~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~~~~~DG~~~-----tq~~i~pG~~~~Y~f~~~~ 118 (538)
...+++||+. .|+|+|++|+++++|+.|... ....+|++|..... -..||.+. ....|.|||+++..+++.+
T Consensus 167 ~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~ 244 (534)
T 1zpu_A 167 PQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTV-VEIDGITTEKNVTDMLYITVAQRYTVLVHTKN 244 (534)
T ss_dssp CSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCS
T ss_pred CceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEE-EeccCcCccccEeceEEECccceEEEEEEcCC
Confidence 4578999985 699999999999999999975 46778888875543 36899753 3356999999999999963
Q ss_pred C-ccceeeecCchhhhh-------cceeeEEEEecCCC-CCCCCCCCCCceEEEEeeecccC----------hhhHHHHh
Q 009283 119 Q-IGSYFYFPSLAFHKA-------AGGYGGIKIASRPL-IPVPFDPPAGDFTILAGDWYKKN----------HTDLKAIL 179 (538)
Q Consensus 119 ~-~Gt~wYH~H~~~q~~-------~Gl~G~liV~~~~~-~~~~~~~~~~e~~l~l~d~~~~~----------~~~~~~~~ 179 (538)
+ .|.||.......... ..-..+++...... .+.+.. ..++...+.+..... +..+.-.+
T Consensus 245 ~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~--~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~ 322 (534)
T 1zpu_A 245 DTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNY--VDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDV 322 (534)
T ss_dssp CSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCC--CSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEE
T ss_pred CCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCc--ccccccccccccceeCCCCCCCCCCCeEEEEEE
Confidence 3 578999976432210 11112233222111 111100 000000000000000 00000000
Q ss_pred ccCCCCCCCCeEEEcCCCCC--------------------------CceEEEecCCEEEEEEEecCCCceEEEEEeCCee
Q 009283 180 DSGSDLPFPDGLVINGRGSN--------------------------ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKM 233 (538)
Q Consensus 180 ~~~~~~~~~~~~liNG~~~~--------------------------~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~ 233 (538)
...........++|||+.+. ...+.++.|++++|.|.|.+.. .|.||||||.|
T Consensus 323 ~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~-~HP~HLHGh~F 401 (534)
T 1zpu_A 323 VMDNLKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQDTG-THPFHLHGHAF 401 (534)
T ss_dssp EEEECTTSCEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECSSS-CEEEEETTCCE
T ss_pred EeeccCCceeEEEECCCcccCCCCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCCCC-CCCeEecCCce
Confidence 00000011236789998752 2358899999999999998865 89999999999
Q ss_pred EEEEEcCe-----------e---------cccceecEEEEcCCCeEEEEEEeCCCCcceEEEEEee
Q 009283 234 LLVEVEGT-----------H---------TLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTR 279 (538)
Q Consensus 234 ~via~DG~-----------~---------~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 279 (538)
+|++.++. + ..|...|++.+.||+.+.+.++++ .||.|.++++..
T Consensus 402 ~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aD-NPG~W~~HCHi~ 466 (534)
T 1zpu_A 402 QTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKAD-NPGVWFFHCHIE 466 (534)
T ss_dssp EEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEEEEECC-SCEEEEEEECCH
T ss_pred EEEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEEEEEEeC-CCeeEEEEeCch
Confidence 99998853 1 236788999999999999999998 899999999864
No 60
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.42 E-value=2.7e-12 Score=136.26 Aligned_cols=231 Identities=12% Similarity=0.127 Sum_probs=150.0
Q ss_pred eEEEEEcCcC--------cCceEEEecCCEEEEEEEeCCC-CCceeeeccccCCCCCCCCCCCC-----CCCCCCCCCeE
Q 009283 45 QQGILINGQF--------PGPSIEAVTNDNLIISVFNALD-EPFLISWNGVQQRRNSWQDGVYG-----TNCPIPPGKNF 110 (538)
Q Consensus 45 ~~~~~~Ng~~--------pgP~i~v~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~~~~~DG~~~-----tq~~i~pG~~~ 110 (538)
...+++||+- +-|.|+|++|+++++|+.|... ....+|++|..... -..||.+. ....|.|||++
T Consensus 166 ~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGqR~ 244 (499)
T 3pxl_A 166 ADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTI-IEVDSVNSQPLEVDSIQIFAAQRY 244 (499)
T ss_dssp CSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESBEEECTTCEE
T ss_pred CcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEECCcccCceEeeeEEECCCcEE
Confidence 4689999972 3479999999999999999865 56789999976543 36899863 23459999999
Q ss_pred EEEEEecCCccceeeecCch--h-hhhcceeeEEEEecCCCCCCCCCCCCCceEEEEeeecccChhh-----------HH
Q 009283 111 TYVLQVKDQIGSYFYFPSLA--F-HKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTD-----------LK 176 (538)
Q Consensus 111 ~Y~f~~~~~~Gt~wYH~H~~--~-q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~-----------~~ 176 (538)
+..+++.+.+|.||..+... . ....|..-+++.........+........ ..+.+..+..... ..
T Consensus 245 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~-~~~~~~~L~p~~~~~~p~~~~~~~~d 323 (499)
T 3pxl_A 245 SFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSV-KPLNEVDLHPLVSTPVPGAPSSGGVD 323 (499)
T ss_dssp EEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCS-SBCCGGGCCBSSCCCCSSCSSTTCSS
T ss_pred EEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCC-cccccccccccccccCCCcccCCCCc
Confidence 99999965569999997632 1 11222322444443222111110000000 0001111000000 00
Q ss_pred HHhccCCCCCCCCeEEEcCCCCC-----------------------CceEEEecCCEEEEEEEecC--CCceEEEEEeCC
Q 009283 177 AILDSGSDLPFPDGLVINGRGSN-----------------------ANTFTVDQGKTYRFRISNVG--ISTSINFRIQGH 231 (538)
Q Consensus 177 ~~~~~~~~~~~~~~~liNG~~~~-----------------------~p~~~v~~G~~~rlRliN~~--~~~~~~~~l~gh 231 (538)
..+... ....+..++|||+.+. .+.+.++.|++|+|.|.|.+ ....|.||+|||
T Consensus 324 ~~~~l~-~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh 402 (499)
T 3pxl_A 324 KAINMA-FNFNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGH 402 (499)
T ss_dssp EEEECC-EEECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTC
T ss_pred EEEEEE-EEecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCCCccceecCC
Confidence 000000 0001236889998752 23588999999999999422 234799999999
Q ss_pred eeEEEEEcCeec----ccceecEEEEcC---CCeEEEEEEeCCCCcceEEEEEee
Q 009283 232 KMLLVEVEGTHT----LQNTYDSLDIHL---GQSYSVLVRADQPPQGYYIVISTR 279 (538)
Q Consensus 232 ~~~via~DG~~~----~p~~~~~v~l~p---geR~dv~v~~~~~~g~y~i~~~~~ 279 (538)
.|+|++.+|... .|...|++.+.+ |+...+.++++ .||.|.++++..
T Consensus 403 ~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~ad-nPG~W~~HCHi~ 456 (499)
T 3pxl_A 403 TFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTN-NPGPWFLHCHID 456 (499)
T ss_dssp CEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECC-SCEEEEEEESSH
T ss_pred cEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcC-CCceEEEEeCCh
Confidence 999999888643 588899999986 99999999998 899999999864
No 61
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.41 E-value=6.9e-12 Score=135.41 Aligned_cols=204 Identities=12% Similarity=0.140 Sum_probs=136.0
Q ss_pred eEEEecCCEEEEEEEeCCC-CCceeeeccccCCCCCCCCCCCC-----CCCCCCCCCeEEEEEEec-CCccceeeecCch
Q 009283 58 SIEAVTNDNLIISVFNALD-EPFLISWNGVQQRRNSWQDGVYG-----TNCPIPPGKNFTYVLQVK-DQIGSYFYFPSLA 130 (538)
Q Consensus 58 ~i~v~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~~~~~DG~~~-----tq~~i~pG~~~~Y~f~~~-~~~Gt~wYH~H~~ 130 (538)
+|+|++|+++++|+.|... ....+|++|..... -..||.+. ....|.||++++..+++. +.+|.||-+++..
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLV-VEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEEE-EEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 8999999999999999975 45778998875543 35899752 345699999999999993 3489999999854
Q ss_pred hhhhcc--eeeEEEEecCCC--CCC---C-CC--------------------------CCCCceEEEEeeecccChhhHH
Q 009283 131 FHKAAG--GYGGIKIASRPL--IPV---P-FD--------------------------PPAGDFTILAGDWYKKNHTDLK 176 (538)
Q Consensus 131 ~q~~~G--l~G~liV~~~~~--~~~---~-~~--------------------------~~~~e~~l~l~d~~~~~~~~~~ 176 (538)
.--.+. ..+.|-...... .+. + .+ ..++.+.+.++.-
T Consensus 284 ~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~--------- 354 (552)
T 1aoz_A 284 ARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQN--------- 354 (552)
T ss_dssp SSCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCTTCHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEEE---------
T ss_pred cCCCCCccEEEEEEECCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCCCCCCcEEEEEEEeec---------
Confidence 210111 123333322211 000 0 00 0011111111000
Q ss_pred HHhccCCCCCCCCeEEEcCCCCC---------------------------------------------CceEEEecCCEE
Q 009283 177 AILDSGSDLPFPDGLVINGRGSN---------------------------------------------ANTFTVDQGKTY 211 (538)
Q Consensus 177 ~~~~~~~~~~~~~~~liNG~~~~---------------------------------------------~p~~~v~~G~~~ 211 (538)
.......+.|||+.+. ...+.++.|+++
T Consensus 355 -------~~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v 427 (552)
T 1aoz_A 355 -------VINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVV 427 (552)
T ss_dssp -------EETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEE
T ss_pred -------cCCCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCEE
Confidence 0000113555655320 134889999999
Q ss_pred EEEEEecCC-----CceEEEEEeCCeeEEEEE-cCee----------cccceecEEEEcCCCeEEEEEEeCCCCcceEEE
Q 009283 212 RFRISNVGI-----STSINFRIQGHKMLLVEV-EGTH----------TLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIV 275 (538)
Q Consensus 212 rlRliN~~~-----~~~~~~~l~gh~~~via~-DG~~----------~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~ 275 (538)
+|.|.|.+. ...|.||||||.|+|++. +|.+ .+|...|++.+.||+.+.+.++++ .||.|.++
T Consensus 428 ~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aD-NPG~W~~H 506 (552)
T 1aoz_A 428 DVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVAD-NPGVWAFH 506 (552)
T ss_dssp EEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECC-SCEEEEEE
T ss_pred EEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcC-CCeEEEEE
Confidence 999999875 346999999999999998 4553 247789999999999999999998 89999999
Q ss_pred EEee
Q 009283 276 ISTR 279 (538)
Q Consensus 276 ~~~~ 279 (538)
++..
T Consensus 507 CHi~ 510 (552)
T 1aoz_A 507 CHIE 510 (552)
T ss_dssp ESSH
T ss_pred eeeh
Confidence 9874
No 62
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.40 E-value=1.7e-12 Score=109.74 Aligned_cols=104 Identities=18% Similarity=0.128 Sum_probs=77.9
Q ss_pred EEEEEEEEEEe-----cCCCeeeEE-EEEcCcCcCceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCCCC
Q 009283 28 FFNWNVTYGDI-----YPLGVKQQG-ILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTN 101 (538)
Q Consensus 28 ~~~l~~~~~~~-----~~~G~~~~~-~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~tq 101 (538)
.|.+.+..... ..+|..... ..||+++++|.|++++||+|+++++|.... +||+.... .|+ +
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~----~~~---~ 70 (112)
T 1iby_A 3 NFNVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPI-----SEGFSIDA----FGV---Q 70 (112)
T ss_dssp CEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSS-----CEEEEEGG----GTE---E
T ss_pred ceeEEEEeccCccccEEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCCC-----eEEEEEcC----CCc---e
Confidence 45555555432 345666555 599999999999999999999999999755 56654321 122 3
Q ss_pred CCCCCCCeEEEEEEecCCccceeeecCchhhhhcceeeEEEEec
Q 009283 102 CPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIAS 145 (538)
Q Consensus 102 ~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 145 (538)
..+.||++++|.|++ +++|+||||||...+... |.|.|+|.+
T Consensus 71 ~~i~pG~~~~~~f~~-~~~G~y~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 71 EVIKAGETKTISFTA-DKAGAFTIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp EEECTTCEEEEEEEC-CSCEEEEEBCSSSCTTTB-CCEEEEEEC
T ss_pred eEeCCCCEEEEEEEC-CCCEEEEEECCCCCchHH-CEEEEEEeC
Confidence 669999999999998 589999999986544333 999999974
No 63
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.40 E-value=8.4e-13 Score=133.80 Aligned_cols=104 Identities=18% Similarity=0.253 Sum_probs=84.7
Q ss_pred EEEcCcC--cCceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCC-------C--CCCCCCCCCeEEEEEEe
Q 009283 48 ILINGQF--PGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVY-------G--TNCPIPPGKNFTYVLQV 116 (538)
Q Consensus 48 ~~~Ng~~--pgP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~-------~--tq~~i~pG~~~~Y~f~~ 116 (538)
|+|||+. ..|.|++++||+|++++.|.....+.+|+||...... .+|.. . ....|.||++++|.|++
T Consensus 198 ~~iNG~~~~~~~~l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f~v~--~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~ 275 (343)
T 3cg8_A 198 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIA 275 (343)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEET
T ss_pred ceecccCCCCCccEEeCCCCEEEEEEEcCCccccccEecCcEEEEe--ccCcccCCCCcccceeeEEeCCCCEEEEEEEE
Confidence 6899986 4789999999999999999998999999999864332 23421 1 22459999999999996
Q ss_pred --cCCccceeeecCchhhhhcceeeEEEEecCCCCCCCC
Q 009283 117 --KDQIGSYFYFPSLAFHKAAGGYGGIKIASRPLIPVPF 153 (538)
Q Consensus 117 --~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~ 153 (538)
.+.+|+|+||||...+...||.|.++|.+++.....|
T Consensus 276 ~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~~~~P~y 314 (343)
T 3cg8_A 276 GEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTIPGY 314 (343)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTSCCSCC
T ss_pred CCCCCCeeEEEeCCCHHHHhccCcEEEEEecCCCCCCCC
Confidence 2579999999999999999999999999876543333
No 64
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.39 E-value=1.2e-11 Score=133.38 Aligned_cols=233 Identities=13% Similarity=0.095 Sum_probs=146.7
Q ss_pred eEEEEEcCcCc--------CceEEEecCCEEEEEEEeCCC-CCceeeeccccCCCCCCCCCCCC-----CCCCCCCCCeE
Q 009283 45 QQGILINGQFP--------GPSIEAVTNDNLIISVFNALD-EPFLISWNGVQQRRNSWQDGVYG-----TNCPIPPGKNF 110 (538)
Q Consensus 45 ~~~~~~Ng~~p--------gP~i~v~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~~~~~DG~~~-----tq~~i~pG~~~ 110 (538)
...+++||+.. -|+|+|++|+++++|+.|... ....+|++|..... -..||.+. ....|.|||++
T Consensus 195 ~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgeR~ 273 (559)
T 2q9o_A 195 SDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTV-IAADMVPVNAMTVDSLFLAVGQRY 273 (559)
T ss_dssp BSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEE
T ss_pred cceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEE-EecCCcccCceEeCeEEEccEEEE
Confidence 45789999863 379999999999999999976 45789999976543 35799863 33569999999
Q ss_pred EEEEEecCCccceeeecCc--hhh---hhcceeeEEEEecCCCCCCCCCC----CC----CceEE-EEeeecc-cCh--h
Q 009283 111 TYVLQVKDQIGSYFYFPSL--AFH---KAAGGYGGIKIASRPLIPVPFDP----PA----GDFTI-LAGDWYK-KNH--T 173 (538)
Q Consensus 111 ~Y~f~~~~~~Gt~wYH~H~--~~q---~~~Gl~G~liV~~~~~~~~~~~~----~~----~e~~l-~l~d~~~-~~~--~ 173 (538)
+..+++.+.+|.||..... ... .......+++.........|... .+ .+..+ -+..... ... .
T Consensus 274 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~ 353 (559)
T 2q9o_A 274 DVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGGLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSFVK 353 (559)
T ss_dssp EEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCCSCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTCCC
T ss_pred EEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCCCCCCCCCCcCCCcccccccccccCCCCCCCCccccc
Confidence 9999996557999988764 211 01111123333221111111100 00 00000 0000000 000 0
Q ss_pred hHHHHh--ccCCCCCCCCeEEEcCCCCC----Cc-----------------eEEEecCCEEEEEEEecCC----CceEEE
Q 009283 174 DLKAIL--DSGSDLPFPDGLVINGRGSN----AN-----------------TFTVDQGKTYRFRISNVGI----STSINF 226 (538)
Q Consensus 174 ~~~~~~--~~~~~~~~~~~~liNG~~~~----~p-----------------~~~v~~G~~~rlRliN~~~----~~~~~~ 226 (538)
.....+ ...........++|||+.+. .| .+.++.++.+++.++|... ...|.|
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~ 433 (559)
T 2q9o_A 354 RPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPM 433 (559)
T ss_dssp CGGGEEEEEEECSSSSSCEEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCEEE
T ss_pred ceeEEEEEEeecCCCceEEEEECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeCCCccccCCCCcE
Confidence 000000 00000112347899999862 12 3777777777776776643 458999
Q ss_pred EEeCCeeEEEEEcC---------ee------------cccceecEEEEcCCCeEEEEEEeCCCCcceEEEEEee
Q 009283 227 RIQGHKMLLVEVEG---------TH------------TLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTR 279 (538)
Q Consensus 227 ~l~gh~~~via~DG---------~~------------~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 279 (538)
|||||.|+|++.++ .. ..|...|++.|.+|+++.+.++++ .||.|.++++..
T Consensus 434 HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~ad-NPG~W~~HCHil 506 (559)
T 2q9o_A 434 HLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTD-NPGAWLFHCHIA 506 (559)
T ss_dssp EESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECC-SCEEEEEEECCH
T ss_pred EECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcC-CCeeEEEEecch
Confidence 99999999999986 22 146789999999999999999988 899999999874
No 65
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.35 E-value=3.2e-11 Score=127.17 Aligned_cols=247 Identities=16% Similarity=0.178 Sum_probs=154.3
Q ss_pred EEEEEEEEEEEecCCC--------------eeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCC-CCceeee-ccccCCC
Q 009283 27 RFFNWNVTYGDIYPLG--------------VKQQGILINGQFPGPSIEAVTNDNLIISVFNALD-EPFLISW-NGVQQRR 90 (538)
Q Consensus 27 ~~~~l~~~~~~~~~~G--------------~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~-~~~siH~-HG~~~~~ 90 (538)
.++.|.++.-....+| .....+++||+. .|.+.+ +|+++++|+.|... ....+++ +|.....
T Consensus 151 ~d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~-~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~v 228 (488)
T 3od3_A 151 DDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAI-YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYV 228 (488)
T ss_dssp TEEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBS-SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEE
T ss_pred cceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCc-CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEE
Confidence 3666777665543333 223578999985 588876 67899999999965 4567777 5754332
Q ss_pred CCCCCCCC----C--CCCCCCCCCeEEEEEEecCCccceeeecCchhhhh------cceeeEEEEec-----CCCCCC--
Q 009283 91 NSWQDGVY----G--TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKA------AGGYGGIKIAS-----RPLIPV-- 151 (538)
Q Consensus 91 ~~~~DG~~----~--tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~------~Gl~G~liV~~-----~~~~~~-- 151 (538)
-..||.+ . ....|.|||+++..++++ +.+.|+.-+....... +.-.-.+-|.+ ....+.
T Consensus 229 -Ia~DG~~l~~P~~~~~l~l~pGeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~L 306 (488)
T 3od3_A 229 -IASDGGLLPEPVKVSELPVLMGERFEVLVEVN-DNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTL 306 (488)
T ss_dssp -EEETTEEEEEEEEESCEEECTTCEEEEEEEEC-TTCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCSCC
T ss_pred -EEeCCCcccCccEeceEEECCCCEEEEEEEeC-CCceEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCccc
Confidence 3689853 2 345699999999999996 5777776554211100 00000122221 111111
Q ss_pred -CCC---C--C--CCceEEEEeeecccChh--hHHH-----Hhc------------cCCC--------CCCCCeEEEcCC
Q 009283 152 -PFD---P--P--AGDFTILAGDWYKKNHT--DLKA-----ILD------------SGSD--------LPFPDGLVINGR 196 (538)
Q Consensus 152 -~~~---~--~--~~e~~l~l~d~~~~~~~--~~~~-----~~~------------~~~~--------~~~~~~~liNG~ 196 (538)
+.+ . . .+++.+.+.. ..+..+ .+.+ .+. .|.. ......++|||+
T Consensus 307 ~~~~~~~~~~~~~~r~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~ 385 (488)
T 3od3_A 307 SSLPALPSLEGLTVRKLQLSMDP-MLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQ 385 (488)
T ss_dssp CCCCCCCCCTTCCEEEEEEEECH-HHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTB
T ss_pred ccCCCCcccccccceEEEEEecc-cccccccccccccccccccccccccccccccccCccccccccccccccceeeECCe
Confidence 110 0 1 1223333321 000000 0000 000 0000 001124799999
Q ss_pred CCC--CceEEEecCCEEEEEEEecCCCceEEEEEeCCeeEEEEEcCeeccc---ceecEEEEcCCCeEEEEEEeCC---C
Q 009283 197 GSN--ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQ---NTYDSLDIHLGQSYSVLVRADQ---P 268 (538)
Q Consensus 197 ~~~--~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p---~~~~~v~l~pgeR~dv~v~~~~---~ 268 (538)
.++ .+.++++.|+++||+|+|.+....|.|||||+.|+|++.||....+ ..+|++.|. ||+..|.+++++ .
T Consensus 386 ~~~~~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~ 464 (488)
T 3od3_A 386 AFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVLVKFNHDAPK 464 (488)
T ss_dssp CCCTTCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEEECBCSCCCG
T ss_pred eCCCCCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEEEEEeccCCCC
Confidence 874 4678999999999999999865589999999999999999987754 468999999 999999999974 3
Q ss_pred CcceEEEEEee
Q 009283 269 PQGYYIVISTR 279 (538)
Q Consensus 269 ~g~y~i~~~~~ 279 (538)
+|.|.++++..
T Consensus 465 ~G~~m~HCH~l 475 (488)
T 3od3_A 465 EHAYMAHCHLL 475 (488)
T ss_dssp GGCEEEEESSH
T ss_pred CCCEEEeCCch
Confidence 57899999763
No 66
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.35 E-value=2.1e-11 Score=128.01 Aligned_cols=226 Identities=15% Similarity=0.130 Sum_probs=149.9
Q ss_pred EEEEEEEEEEEecC-------------CCeeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCC-CCceeee--cc---cc
Q 009283 27 RFFNWNVTYGDIYP-------------LGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALD-EPFLISW--NG---VQ 87 (538)
Q Consensus 27 ~~~~l~~~~~~~~~-------------~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~-~~~siH~--HG---~~ 87 (538)
+++.|.+++-.... .|.....+++||+. .|+|+|++| ++++|+.|... ....+|+ +| ..
T Consensus 138 ~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~ 215 (448)
T 3aw5_A 138 NDLPLVISDRRFIGGAPVYNPTPMEMIAGFLGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVP 215 (448)
T ss_dssp TEEEEEEEEEEEETTEEECCCCHHHHHHCCCCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEEC
T ss_pred ceEEEEEEeeccCCCcccccccccccccCccccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCcc
Confidence 56667666554332 12234578999985 699999999 99999999976 5678999 77 43
Q ss_pred CCCCCCCCCCCC------CCCCCCCCCeEEEEEEecCCccceeeecCchhhhhc---c----------eeeEE--EEecC
Q 009283 88 QRRNSWQDGVYG------TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAA---G----------GYGGI--KIASR 146 (538)
Q Consensus 88 ~~~~~~~DG~~~------tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~---G----------l~G~l--iV~~~ 146 (538)
... -..||.+. ....|.|||+++..++++ .|.||..++....... + -...+ .+...
T Consensus 216 ~~v-ia~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~--~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (448)
T 3aw5_A 216 MRL-IAVDQGFLARPIEVRALFLAPAERAEVVVELG--EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGK 292 (448)
T ss_dssp EEE-EEETTEEEEEEEEESCEEECTTCEEEEEEEEC--SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEE
T ss_pred EEE-EEeCCCccCCceEeceEEECCcceEEEEEECC--CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCC
Confidence 332 35799752 234599999999999995 4788988763211000 0 11112 22121
Q ss_pred CCC--CCCCC-------CCCCceEEEEeeecccChhhHHHHhccCCCCCCCCeEEEcCCCCC--CceEE-EecCCEEEEE
Q 009283 147 PLI--PVPFD-------PPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSN--ANTFT-VDQGKTYRFR 214 (538)
Q Consensus 147 ~~~--~~~~~-------~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~--~p~~~-v~~G~~~rlR 214 (538)
... +.... ....+..+.+. .+ ...++|||+.+. .+.+. ++.|++++|+
T Consensus 293 ~~~~~p~~L~~lp~~~~~~~~~~~~~l~---------------~~-----~~~~~iNg~~~~~~~p~~~~~~~g~~v~~~ 352 (448)
T 3aw5_A 293 GEAVPVEALSDPPPEPPKPTRTRRFALS---------------LS-----GMQWTINGMFWNASNPLFEHVSVEGVELWE 352 (448)
T ss_dssp CCCCCCCCCSCCCCCCCCCSEEEEEEEE---------------EE-----TTEEEETTBCCCTTCTTCCCEEECEEEEEE
T ss_pred CCCCCccccCCCCCCCCCCCceEEEEEe---------------CC-----CceeeECCCcCCCCCCceeccCCCCeEEEE
Confidence 110 00000 00011111111 00 125899999874 35567 9999999999
Q ss_pred EEecCCCceEEEEEeCCeeEEEEEcCeec------------cc---ceecEEEEcCCCeEEEEEEeC---C-CCcceEEE
Q 009283 215 ISNVGISTSINFRIQGHKMLLVEVEGTHT------------LQ---NTYDSLDIHLGQSYSVLVRAD---Q-PPQGYYIV 275 (538)
Q Consensus 215 liN~~~~~~~~~~l~gh~~~via~DG~~~------------~p---~~~~~v~l~pgeR~dv~v~~~---~-~~g~y~i~ 275 (538)
|.|.+....|.||||||.|+|++.+|... .| ...|++.+.||+++.+.+++. . .| |.++
T Consensus 353 i~N~~~~~~HP~HLHG~~F~Vl~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~H 430 (448)
T 3aw5_A 353 IVNDKASMPHPMHLHGFPMWIIERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFH 430 (448)
T ss_dssp EEECSSSCCEEEEESSSCBEEEEEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEE
T ss_pred EEcCCCCCCcCEEECCceEEEEEecCCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEE
Confidence 99998344899999999999999999874 23 478999999999999996664 2 44 8888
Q ss_pred EEee
Q 009283 276 ISTR 279 (538)
Q Consensus 276 ~~~~ 279 (538)
|+..
T Consensus 431 CHil 434 (448)
T 3aw5_A 431 CHNL 434 (448)
T ss_dssp ESSH
T ss_pred cCCh
Confidence 8763
No 67
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.33 E-value=3e-12 Score=136.52 Aligned_cols=95 Identities=19% Similarity=0.204 Sum_probs=75.5
Q ss_pred CCeeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCCCCCCCCCCCeEEEEEEecCCc
Q 009283 41 LGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQI 120 (538)
Q Consensus 41 ~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~tq~~i~pG~~~~Y~f~~~~~~ 120 (538)
+++...+|++|++|++|+|++++||+|+++++|..+..-. +||+.+.. .|+ +..|.||++++|.|++ +++
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~----~gv---~~~i~PG~t~t~~Fta-~~p 566 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGN----YGV---AMEIGPQMTSSVTFVA-ANP 566 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETT----TTE---EEEECTTCEEEEEEEC-CSC
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecC----CCc---ceeeCCCCeEEEEEEC-CCC
Confidence 4678899999999999999999999999999998653111 46665432 233 2679999999999999 589
Q ss_pred cceeeecCc---hhhhhcceeeEEEEecCC
Q 009283 121 GSYFYFPSL---AFHKAAGGYGGIKIASRP 147 (538)
Q Consensus 121 Gt~wYH~H~---~~q~~~Gl~G~liV~~~~ 147 (538)
|+||||||. ..| .||+|.|+|++++
T Consensus 567 GtY~yhC~e~Cg~~H--~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 567 GVYWYYCQWFCHALH--MEMRGRMLVEPKE 594 (595)
T ss_dssp EEEEEECCSCCSTTC--TTCEEEEEEECC-
T ss_pred EEEEEECCCCCCCCc--cCCEEEEEEEcCC
Confidence 999999993 234 3999999999753
No 68
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.33 E-value=8.4e-11 Score=127.20 Aligned_cols=230 Identities=11% Similarity=0.051 Sum_probs=145.1
Q ss_pred EEEEEcCcCcCceEEEecCCEEEEEEEeCCC-CCceeeeccc-------cCCCCCCCCCCC----C--C------CCCCC
Q 009283 46 QGILINGQFPGPSIEAVTNDNLIISVFNALD-EPFLISWNGV-------QQRRNSWQDGVY----G--T------NCPIP 105 (538)
Q Consensus 46 ~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~-~~~siH~HG~-------~~~~~~~~DG~~----~--t------q~~i~ 105 (538)
..+++||+. .|.+.|++| ++++|+.|... ....+++.|. ... --..||.+ . . ...|.
T Consensus 255 d~~lVNG~~-~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~-vIa~DG~~l~~P~~~~~~~~~~~l~l~ 331 (612)
T 2g23_A 255 PYTTVNGRI-WPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVH-QIGSDGGLLPRPVPVDFDDTLPVLSAA 331 (612)
T ss_dssp SEEEETTEE-SCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEE-EEEETTEEEEEEEEECSSSSSSSEEEC
T ss_pred CEEEECCcc-CCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEE-EEEeCCeEccCCEEecccCcccEEEEC
Confidence 568999995 699999999 99999999975 5677888765 111 13578864 2 2 45689
Q ss_pred CCCeEEEEEEecCCccc-eeeecCchhhh------hc----ceeeEEEEecCC-CCC--CC------CCCCCCc-----e
Q 009283 106 PGKNFTYVLQVKDQIGS-YFYFPSLAFHK------AA----GGYGGIKIASRP-LIP--VP------FDPPAGD-----F 160 (538)
Q Consensus 106 pG~~~~Y~f~~~~~~Gt-~wYH~H~~~q~------~~----Gl~G~liV~~~~-~~~--~~------~~~~~~e-----~ 160 (538)
|||+++.-+++.+.+|+ ++-..-..... .+ +..--+.|..+. .+. .| +.....+ .
T Consensus 332 pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~~~~r 411 (612)
T 2g23_A 332 PAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHGHR 411 (612)
T ss_dssp TTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCEEE
T ss_pred CcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCccccccee
Confidence 99999999999755674 66554421110 01 111124454332 111 11 1000000 1
Q ss_pred EEEEe------------eecccChhhHHH-Hhc-cC-----CCCCCCCeEEEcCCCC-CCceEEEecCCEEEEEEEecCC
Q 009283 161 TILAG------------DWYKKNHTDLKA-ILD-SG-----SDLPFPDGLVINGRGS-NANTFTVDQGKTYRFRISNVGI 220 (538)
Q Consensus 161 ~l~l~------------d~~~~~~~~~~~-~~~-~~-----~~~~~~~~~liNG~~~-~~p~~~v~~G~~~rlRliN~~~ 220 (538)
.+++. -|.......-.. .+. .+ ........++|||+.+ +.+.++++.|++++|+|+|.+.
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~~~~~~~v~~G~~v~w~l~N~~~ 491 (612)
T 2g23_A 412 LIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATFNDGLGFTIGEGTHEQWTFLNLSP 491 (612)
T ss_dssp EEEECCTTCTTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECSTTSCCCEEEETTCEEEEEEEECSS
T ss_pred EEeeccccccccccccceeeccccccccccccccccceeeeccCCceeEEEECCccCCCCCceEecCCCEEEEEEEeCCC
Confidence 12221 011100000000 000 00 0001123588999976 3588999999999999999986
Q ss_pred CceEEEEEeCCeeEEEEEcCe------------------------ec---ccceecEEEEcCCCeEEEEEEeCCCCcceE
Q 009283 221 STSINFRIQGHKMLLVEVEGT------------------------HT---LQNTYDSLDIHLGQSYSVLVRADQPPQGYY 273 (538)
Q Consensus 221 ~~~~~~~l~gh~~~via~DG~------------------------~~---~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~ 273 (538)
. .|.||||+|.|+|++.+|. +. ++..+|++.|.|||++.|.++++..+|.|.
T Consensus 492 ~-~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~ 570 (612)
T 2g23_A 492 I-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFM 570 (612)
T ss_dssp S-CEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEE
T ss_pred C-CCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEEEeCCCCccEE
Confidence 5 8999999999999987542 11 123689999999999999999987789999
Q ss_pred EEEEee
Q 009283 274 IVISTR 279 (538)
Q Consensus 274 i~~~~~ 279 (538)
++|+..
T Consensus 571 ~HCHil 576 (612)
T 2g23_A 571 YHCHLL 576 (612)
T ss_dssp EEESSH
T ss_pred EEeCch
Confidence 999864
No 69
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.25 E-value=9.4e-12 Score=109.35 Aligned_cols=93 Identities=13% Similarity=0.056 Sum_probs=72.7
Q ss_pred EEEccCCcEEEEEEEcCCCC-CCCccccCCCceEEe-------ecC--CCCCCCCCCCcCCCCCCceeeEEeCCCCEEEE
Q 009283 411 VMAADFRGFAEVVFENPEDT-LQSWHIDGHNFFAVG-------MDG--GEWTPASRLTYNLRDTISRCTVQVYPKSWTAV 480 (538)
Q Consensus 411 ~~~~~~g~~v~~~l~N~~~~-~HP~HlHG~~F~Vl~-------~~~--g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~i 480 (538)
.++++.|++|+|+|.|.+.. .|.||+|+....+.. ... ..+.+.. ....++||..|.|++...+
T Consensus 36 ~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~------~~~~~~~t~~l~pGet~~v 109 (139)
T 2aan_A 36 ELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPAD------KSNIIAESPLANGNETVEV 109 (139)
T ss_dssp EEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSC------CTTEEEECCCBCTTCEEEE
T ss_pred eEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcc------cccccccccccCCCCEEEE
Confidence 46789999999999999888 899999987642211 100 0111100 1235889999999999999
Q ss_pred EEEccCcceeeeeecchhhhhcceEEEEEE
Q 009283 481 YVPLDNVGMWNIRSENWARQYLGQQFYLRV 510 (538)
Q Consensus 481 rf~adnpG~w~~HCHil~H~d~GMm~~~~V 510 (538)
.|.+++||.|.||||+..|.. ||+..+.|
T Consensus 110 ~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V 138 (139)
T 2aan_A 110 TFTAPAAGTYLYICTVPGHYP-LMQGKLVV 138 (139)
T ss_dssp EEECCSSEEEEEECCSTTTTT-TSEEEEEE
T ss_pred EEECCCCeEEEEEcCCCChHH-cCEEEEEE
Confidence 999999999999999999999 99999987
No 70
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.24 E-value=9.2e-11 Score=125.41 Aligned_cols=216 Identities=13% Similarity=0.073 Sum_probs=139.8
Q ss_pred eEEEEEcCcCcCceEEEecCCEEEEEEEeCCCC-Cceeeeccc-cCCCCCCCCCCC----C--CCCCCCCCCeEEEEEEe
Q 009283 45 QQGILINGQFPGPSIEAVTNDNLIISVFNALDE-PFLISWNGV-QQRRNSWQDGVY----G--TNCPIPPGKNFTYVLQV 116 (538)
Q Consensus 45 ~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~~-~~siH~HG~-~~~~~~~~DG~~----~--tq~~i~pG~~~~Y~f~~ 116 (538)
...+++||+. .|.|.++.| ++++|+.|.... ...+|+.|. ... .-..||.+ . ....|.|||+++..+++
T Consensus 230 ~d~~liNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~-via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~ 306 (513)
T 2wsd_A 230 GETILVNGKV-WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFI-QIGSDGGLLPRSVKLNSFSLAPAERYDIIIDF 306 (513)
T ss_dssp CSEEEETTEE-SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEE-EEEETTEEEEEEEEESEEEECTTCEEEEEEEC
T ss_pred cceEEECCcc-cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEE-EEccCCCcccCceEeCeEEECCeeeEEEEEEC
Confidence 3678999995 699999885 999999999764 578898886 333 23689953 2 23569999999999999
Q ss_pred cCCccceee-ecCch--hhhhcce-eeEEEEecCC--CCC--CCCCC--C----------CCceEEEEeeecccChhhHH
Q 009283 117 KDQIGSYFY-FPSLA--FHKAAGG-YGGIKIASRP--LIP--VPFDP--P----------AGDFTILAGDWYKKNHTDLK 176 (538)
Q Consensus 117 ~~~~Gt~wY-H~H~~--~q~~~Gl-~G~liV~~~~--~~~--~~~~~--~----------~~e~~l~l~d~~~~~~~~~~ 176 (538)
++.+|.++. ..-.. .....+. ...+-..... ..+ ...+. . +.+..+.+...
T Consensus 307 ~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~~--------- 377 (513)
T 2wsd_A 307 TAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAGT--------- 377 (513)
T ss_dssp GGGTTCEEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEEE---------
T ss_pred CCCCCcEEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEee---------
Confidence 644676332 11110 0000011 1222222111 000 00000 0 00011111100
Q ss_pred HHhccCCCCCCCCeEEEcCCCCCC-ceEEEecCCEEEEEEEecCCCceEEEEEeCCeeEEEEEcCe--------------
Q 009283 177 AILDSGSDLPFPDGLVINGRGSNA-NTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGT-------------- 241 (538)
Q Consensus 177 ~~~~~~~~~~~~~~~liNG~~~~~-p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~-------------- 241 (538)
+ .......++|||+.+.. ..+.++.|++++|.|.|.+.. .|.||||||.|+|++.+|.
T Consensus 378 --~----~~~g~~~~~iNg~~~~~~~~~~~~~g~~~~w~l~N~~~~-~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~~~~~ 450 (513)
T 2wsd_A 378 --Q----DEYGRPVLLLNNKRWHDPVTETPKVGTTEIWSIINPTRG-THPIHLHLVSFRVLDRRPFDIARYQESGELSYT 450 (513)
T ss_dssp --E----CTTSCEEEEETTBCTTSCCCBCCBTTCEEEEEEEECSSS-CEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBS
T ss_pred --c----CCCCCceEeECCccCCCcccEecCCCCEEEEEEEcCCCC-CcCEeEeCceEEEEEecCccccccccccccccc
Confidence 0 00111257899998743 456899999999999998865 8999999999999998762
Q ss_pred -ec------ccceecEEEEcCCCeEEEEEEeCCCCcceEEEEEee
Q 009283 242 -HT------LQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTR 279 (538)
Q Consensus 242 -~~------~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 279 (538)
+. ++..+|++.|.||+++.+.+++++.+|.|.++|+..
T Consensus 451 ~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil 495 (513)
T 2wsd_A 451 GPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHAL 495 (513)
T ss_dssp SCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCH
T ss_pred CCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCCh
Confidence 10 234789999999999999999965799999999864
No 71
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.24 E-value=8.8e-11 Score=125.79 Aligned_cols=225 Identities=14% Similarity=0.071 Sum_probs=139.5
Q ss_pred eEEEEEcCcCcCceEEEecCCEEEEEEEeCCC-CCceeeecc-------ccCCCCCCCCCCC----C--CCCCCCCCCeE
Q 009283 45 QQGILINGQFPGPSIEAVTNDNLIISVFNALD-EPFLISWNG-------VQQRRNSWQDGVY----G--TNCPIPPGKNF 110 (538)
Q Consensus 45 ~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~-~~~siH~HG-------~~~~~~~~~DG~~----~--tq~~i~pG~~~ 110 (538)
...+++||+ +.|.|.|+.| ++++|+.|... ....++++| .... .-..||.+ . ....|.|||++
T Consensus 201 gd~~lvNG~-~~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~-vIa~DG~~~~~P~~~~~l~l~pgeR~ 277 (534)
T 3abg_A 201 GDVIHVNGQ-PWPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLPFK-VIASDSGLLEHPADTSLLYISMAERY 277 (534)
T ss_dssp CSEEEETTE-ESCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCCEE-EEEETTEEEEEEEEESCEEECTTCEE
T ss_pred CceeccCCc-cCceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCccEE-EEEeCCCcccCceEeceEEECCccEE
Confidence 457899998 5799999985 99999999975 456788876 2222 23578852 2 34569999999
Q ss_pred EEEEEecCCcc-ceeeecCchhhhhc-------ceeeEEEEecCCCCCCCCCCCCCceEEEEeeec-ccChhhHHHHhcc
Q 009283 111 TYVLQVKDQIG-SYFYFPSLAFHKAA-------GGYGGIKIASRPLIPVPFDPPAGDFTILAGDWY-KKNHTDLKAILDS 181 (538)
Q Consensus 111 ~Y~f~~~~~~G-t~wYH~H~~~q~~~-------Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~-~~~~~~~~~~~~~ 181 (538)
+..+++++.+| +||........... ...+.+-.........+. ....+..+.... ..........+.-
T Consensus 278 dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~---~~~~P~~L~~~~~p~~~~~~~~~~~~ 354 (534)
T 3abg_A 278 EVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPD---TSVVPANLRDVPFPSPTTNTPRQFRF 354 (534)
T ss_dssp EEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSC---CCCCCCCCCCCSCCCCCCCCCEEEEC
T ss_pred EEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCC---CCCCccccccCCCCCCccccceEEEE
Confidence 99999964478 58876532100000 011222222111100000 000000000000 0000000000000
Q ss_pred CCCCCCCCeEEEcCCCCCC---c-eEEEecCCEEEEEEEecCCCceEEEEEeCCeeEEEEE-cCe---eccc---ceecE
Q 009283 182 GSDLPFPDGLVINGRGSNA---N-TFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEV-EGT---HTLQ---NTYDS 250 (538)
Q Consensus 182 ~~~~~~~~~~liNG~~~~~---p-~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~-DG~---~~~p---~~~~~ 250 (538)
. .....++|||+.+.. + .+.++.|++++|.|.|.+....|.||||||.|+|++. +|. ...+ ...|+
T Consensus 355 ~---~~~~~w~iNG~~f~~~~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~~~~~~~~~~rDT 431 (534)
T 3abg_A 355 G---RTGPTWTINGVAFADVQNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMPYESGLKDV 431 (534)
T ss_dssp S---CCCSTTCCCCBTTBCTTSCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSSCCCSGGGSCBSE
T ss_pred e---ccCceeEECCcccCCCCCcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcCcCCccccCCcCe
Confidence 0 011357899998732 2 4679999999999999886558999999999999998 663 1112 46899
Q ss_pred EEEcCCCeEEEEEE-eCCCCcceEEEEEee
Q 009283 251 LDIHLGQSYSVLVR-ADQPPQGYYIVISTR 279 (538)
Q Consensus 251 v~l~pgeR~dv~v~-~~~~~g~y~i~~~~~ 279 (538)
+.+.||+++.|.+. ++ .+|.|.++|+..
T Consensus 432 V~v~pg~~v~I~~~~ad-npG~w~~HCHil 460 (534)
T 3abg_A 432 VWLGRRETVVVEAHYAP-FPGVYMFHCHNL 460 (534)
T ss_dssp ECCCSSEEEEEEEECCS-CCEEEEEEESCH
T ss_pred EEcCCCCEEEEEEEECC-CCccEEEecChH
Confidence 99999999999998 55 899999999874
No 72
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.22 E-value=3.2e-11 Score=100.50 Aligned_cols=78 Identities=12% Similarity=0.154 Sum_probs=62.0
Q ss_pred cCcCcCceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCC-CCCCCCCCCeEEEEEEecCCccceeeecCc
Q 009283 51 NGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSL 129 (538)
Q Consensus 51 Ng~~pgP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~ 129 (538)
+..|..+.|++++||+|++ +|..+.++++|+++. .||... .+..|.||++++|.| +++|+|||||+.
T Consensus 27 ~~~F~P~~i~v~~Gd~V~~--~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~ 94 (105)
T 2ov0_A 27 KMKYETPELHVKVGDTVTW--INREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTP 94 (105)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEcCCEEEECCCCEEEE--EECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 3455578999999999654 699888899998863 356554 556699999999888 379999999986
Q ss_pred hhhhhcceeeEEEEe
Q 009283 130 AFHKAAGGYGGIKIA 144 (538)
Q Consensus 130 ~~q~~~Gl~G~liV~ 144 (538)
.. ||.|.|+|+
T Consensus 95 H~----gM~G~i~V~ 105 (105)
T 2ov0_A 95 HP----FMRGKVVVE 105 (105)
T ss_dssp CT----TCEEEEEEC
T ss_pred CC----CCEEEEEEC
Confidence 43 999999984
No 73
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.19 E-value=2.9e-11 Score=100.71 Aligned_cols=85 Identities=11% Similarity=0.017 Sum_probs=66.9
Q ss_pred EEEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEc-cCcc
Q 009283 410 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPL-DNVG 488 (538)
Q Consensus 410 ~~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~a-dnpG 488 (538)
..++++.|++|+| .|.+...|+||+||..|... . +. + .+....++..+.||+...++|.+ +.||
T Consensus 19 ~~i~v~~Gd~V~~--~N~~~~~H~v~~~~~~~~~~--~-g~-~---------~~~~~~~~~~i~pG~~~~~~f~~~~~~G 83 (105)
T 3cvb_A 19 ANVTVHPGDTVKW--VNNKLPPHNILFDDKQVPGA--S-KE-L---------ADKLSHSQLMFSPGESYEITFSSDFPAG 83 (105)
T ss_dssp SEEEECTTEEEEE--EECSSCCEEEEECTTSSGGG--C-HH-H---------HHHHCEEEEECSTTCEEEEEECTTSCSE
T ss_pred CEEEEcCCCEEEE--EECCCCCCeEEEeCCCCCcc--c-cc-c---------cccccccccccCCCCeEEEEEecCCCCe
Confidence 4578899999876 48777899999999877541 0 00 0 00112588999999999999998 7999
Q ss_pred eeeeeecchhhhhcceEEEEEEe
Q 009283 489 MWNIRSENWARQYLGQQFYLRVY 511 (538)
Q Consensus 489 ~w~~HCHil~H~d~GMm~~~~V~ 511 (538)
.|.|||| .|...||++.+.|.
T Consensus 84 ~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 84 TYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp EEEEECT--TTGGGTCEEEEEEC
T ss_pred eEEEEeC--CchhcCCEEEEEEc
Confidence 9999999 59999999999885
No 74
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=99.14 E-value=2.2e-09 Score=115.41 Aligned_cols=228 Identities=13% Similarity=0.090 Sum_probs=144.3
Q ss_pred eEEEEEcCcCc----------------CceEEEecCCEEEEEEEeCCC-CCceeeeccccCCCCCCCCCCCC-----CCC
Q 009283 45 QQGILINGQFP----------------GPSIEAVTNDNLIISVFNALD-EPFLISWNGVQQRRNSWQDGVYG-----TNC 102 (538)
Q Consensus 45 ~~~~~~Ng~~p----------------gP~i~v~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~~~~~DG~~~-----tq~ 102 (538)
-..+++||+.. .++|+|++|+++++|+.|... ....++++|..... -..||.+. ...
T Consensus 225 ~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~V-Ia~DG~~v~P~~~~~l 303 (580)
T 3sqr_A 225 LENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTV-IANDLVPIVPYTTDTL 303 (580)
T ss_dssp BSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESSE
T ss_pred CceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEE-EEeCCccCCceEeeEE
Confidence 34688999732 379999999999999999975 45689999976543 36799863 235
Q ss_pred CCCCCCeEEEEEEecCCccceeeecCchh-----hhhcceeeEEEEecCCCCCCCCCCCCCceE-EEEee--ecccChh-
Q 009283 103 PIPPGKNFTYVLQVKDQIGSYFYFPSLAF-----HKAAGGYGGIKIASRPLIPVPFDPPAGDFT-ILAGD--WYKKNHT- 173 (538)
Q Consensus 103 ~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~-----q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~-l~l~d--~~~~~~~- 173 (538)
.|.|||+++..+++.+.+|.||....... +.. +..-+++.........|-.. ..+.. ..+.+ ..+.+..
T Consensus 304 ~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~-~~~~aiL~Y~~~~~~~P~~~-~~~~~~~~~~~~~~~L~P~~~ 381 (580)
T 3sqr_A 304 LIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEA-ANATGILRYDSSSIANPTSV-GTTPRGTCEDEPVASLVPHLA 381 (580)
T ss_dssp EECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTG-GGCEEEEESSTTCCCCCCCC-CCCCCCCSCCSCGGGCCBSSC
T ss_pred EEccceEEEEEEEeCCCCCeEEEEEecccccCccCCC-CceEEEEEECCCCCCCCCCC-CCCccchhhcccccccccCCC
Confidence 69999999999999756899999987432 111 12223344332211111100 00000 00000 0000000
Q ss_pred -hHH------HHhccCCCCCCCCeEEEcCCCCC----Cc-----------------eEEE----ecCCEEEEEEEecC--
Q 009283 174 -DLK------AILDSGSDLPFPDGLVINGRGSN----AN-----------------TFTV----DQGKTYRFRISNVG-- 219 (538)
Q Consensus 174 -~~~------~~~~~~~~~~~~~~~liNG~~~~----~p-----------------~~~v----~~G~~~rlRliN~~-- 219 (538)
... ..+..+ ......+.|||..+. .| .+.+ +.|++|.|.|-|.+
T Consensus 382 ~~~~~~~~~~~~l~~~--~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~~ 459 (580)
T 3sqr_A 382 LDVGGYSLVDEQVSSA--FTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTGF 459 (580)
T ss_dssp CBCCSEEEEEEEEEEE--ESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSSS
T ss_pred CCCCCccceEEEEEec--cCCceeEEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCcc
Confidence 000 000000 011235678887641 11 2334 35999999999987
Q ss_pred CCceEEEEEeCCeeEEEEEcCe------------ecccceecEEEEcCCCeEEEEEEeCCCCcceEEEEEee
Q 009283 220 ISTSINFRIQGHKMLLVEVEGT------------HTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTR 279 (538)
Q Consensus 220 ~~~~~~~~l~gh~~~via~DG~------------~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 279 (538)
. ..|.||+|||.|+|++.+.. +..|...|++.+.|++...+.++++ .||.|.++++..
T Consensus 460 ~-~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~ad-NPG~W~~HCHi~ 529 (580)
T 3sqr_A 460 G-IWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLD-NPGSWLLHCHIA 529 (580)
T ss_dssp C-CCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESC-SCEEEEEEECSH
T ss_pred c-cceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcC-CCeeeEEEECcH
Confidence 4 48999999999999988432 2347789999999999999999999 899999999864
No 75
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=99.12 E-value=1.4e-10 Score=96.68 Aligned_cols=83 Identities=16% Similarity=0.297 Sum_probs=63.7
Q ss_pred CceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCC-----CCCCCCCCCCeEEEEEEecCCccceeeecCch
Q 009283 56 GPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVY-----GTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLA 130 (538)
Q Consensus 56 gP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~-----~tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~ 130 (538)
.+.|++++||+|++ +|....++++|+|+..... .+|.. .....+.||++++|.|++++++|+||||||
T Consensus 19 P~~i~v~~Gd~V~~--~n~~~~~H~~~~~~~~~~~---~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~-- 91 (106)
T 2gim_A 19 PAKLTIKPGDTVEF--LNNKVPPHNVVFDAALNPA---KSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE-- 91 (106)
T ss_dssp SSEEEECTTCEEEE--EECSSSCCCBEECSSSSTT---CCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT--
T ss_pred CCEEEECCCCEEEE--EECCCCCceEEEeCCCCcc---cccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC--
Confidence 37999999999755 5887778899988864321 23320 123458999999999987458999999999
Q ss_pred hhhhcceeeEEEEec
Q 009283 131 FHKAAGGYGGIKIAS 145 (538)
Q Consensus 131 ~q~~~Gl~G~liV~~ 145 (538)
.|...||.|.|+|.+
T Consensus 92 ~H~~~GM~G~i~V~~ 106 (106)
T 2gim_A 92 PHRGAGMVGKITVAG 106 (106)
T ss_dssp TTGGGTCEEEEEECC
T ss_pred ChhhcCcEEEEEEcC
Confidence 677889999999963
No 76
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.06 E-value=1.1e-09 Score=109.63 Aligned_cols=100 Identities=17% Similarity=0.213 Sum_probs=81.2
Q ss_pred EEEcCcC--cCceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCC-C-------CCCCCCCCeEEEEEEec
Q 009283 48 ILINGQF--PGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYG-T-------NCPIPPGKNFTYVLQVK 117 (538)
Q Consensus 48 ~~~Ng~~--pgP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-t-------q~~i~pG~~~~Y~f~~~ 117 (538)
|++||.. ..|.+.++.||+|++++.|.....+.+|+||..... ...||..+ . ...|.||+++++.+.+.
T Consensus 163 ~t~Ng~~~~~~~~l~v~~Ge~vr~~liN~g~~~hpfHlHGh~F~v-~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~ 241 (313)
T 3tas_A 163 MTINNRPAHTGPDFEATVGDRVEFVMITHGEYYHTFHLHGHRWAD-NRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAG 241 (313)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEES-STTSSCCSTTCCCCEESEEEECTTCEEEEEEETT
T ss_pred hhcccCCcccccccccccCCEEEEEEecccccceeeeecCCeeEE-EEECCccCCCCCCeeeeEEEeCCCcceEEEEEec
Confidence 6778763 368899999999999999999889999999976532 23455432 1 13489999999999873
Q ss_pred --CCccceeeecCchhhhhcceeeEEEEecCCC
Q 009283 118 --DQIGSYFYFPSLAFHKAAGGYGGIKIASRPL 148 (538)
Q Consensus 118 --~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~ 148 (538)
+.+|+|.||||...+...||.|.++|++++.
T Consensus 242 ~~~nPG~w~~HCHi~~H~~~GM~~~f~V~~~d~ 274 (313)
T 3tas_A 242 EGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 274 (313)
T ss_dssp TTTCSEEEEEEECSHHHHHTTCEEEEEEECTTC
T ss_pred cCCCCEeEEEEeCChHHHHCCCeEEEEEECCCC
Confidence 3489999999999999999999999998764
No 77
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.00 E-value=1.8e-09 Score=107.23 Aligned_cols=100 Identities=15% Similarity=0.149 Sum_probs=79.2
Q ss_pred EEEcCcCc--CceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCC--------CCCCCCCCCeEEEEEEec
Q 009283 48 ILINGQFP--GPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYG--------TNCPIPPGKNFTYVLQVK 117 (538)
Q Consensus 48 ~~~Ng~~p--gP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~--------tq~~i~pG~~~~Y~f~~~ 117 (538)
|.+||+.- -|.++++.||+|++++.|.....+++|+||...... ..|+... ....|.||+++++.+.+.
T Consensus 179 ~~~Ng~~~~~~p~l~v~~Ge~Vr~~liN~~~~~HpfHlHGh~F~v~-~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~ 257 (299)
T 3t9w_A 179 MMINNRAHHDAPTFEANLGERVEWIAIGHGSNFHTFHLHGHRWLDN-RTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAG 257 (299)
T ss_dssp TEETTCCTTCCCEEEEETTCEEEEEEEEESSCCCEEEETTCCEESS-SSSSCCSTTCCCCEESEEECCTTCEEEEEEETT
T ss_pred eeecCccccccccceecCCCEEEEEEEeccccceeeeEecceEEEE-ecccccCCcCCCCceeeEEeCCceeEEEEEEEe
Confidence 56777643 488999999999999999999999999999754321 2233221 113489999999998763
Q ss_pred --CCccceeeecCchhhhhcceeeEEEEecCCC
Q 009283 118 --DQIGSYFYFPSLAFHKAAGGYGGIKIASRPL 148 (538)
Q Consensus 118 --~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~ 148 (538)
+.+|+|+||||...+...||.|.+.|++.+.
T Consensus 258 ~~dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~~ 290 (299)
T 3t9w_A 258 EGVGPGMWMYHCHVQNHSDMGMAGMFLVRNADG 290 (299)
T ss_dssp TTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred eCCCCeeEEEEcCCHHHHhcCCeEEEEEECCCC
Confidence 3589999999999999999999999998764
No 78
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.00 E-value=1.4e-09 Score=95.38 Aligned_cols=90 Identities=9% Similarity=0.033 Sum_probs=67.2
Q ss_pred cCcCceEEEecCCEEEEEEEeCCCC-CceeeeccccC-----------------CCCCCCCCCC-CCCCCCCCCCeEEEE
Q 009283 53 QFPGPSIEAVTNDNLIISVFNALDE-PFLISWNGVQQ-----------------RRNSWQDGVY-GTNCPIPPGKNFTYV 113 (538)
Q Consensus 53 ~~pgP~i~v~~Gd~v~v~~~N~l~~-~~siH~HG~~~-----------------~~~~~~DG~~-~tq~~i~pG~~~~Y~ 113 (538)
+|--+.|+|++||+|+++++|.... .++++.|+... .-.+..+... .....|.||+++++.
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~ 110 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVT 110 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEE
T ss_pred EEcCCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEE
Confidence 3444789999999999999999777 88888887421 0000011100 112348999999999
Q ss_pred EEecCCccceeeecCchhhhhcceeeEEEEe
Q 009283 114 LQVKDQIGSYFYFPSLAFHKAAGGYGGIKIA 144 (538)
Q Consensus 114 f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 144 (538)
|+++ ++|+|+||||...|.. ||.|.|+|+
T Consensus 111 f~~~-~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 111 FTAP-AAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EECC-SSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EECC-CCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 9984 8999999999888888 999999984
No 79
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=98.94 E-value=3.4e-08 Score=108.14 Aligned_cols=90 Identities=12% Similarity=0.076 Sum_probs=75.3
Q ss_pred CeEEEcCCCCC-CceEEEecCCEEEEEEEecCCCceEEEEEeCCeeEEEEEcCeec------------------------
Q 009283 189 DGLVINGRGSN-ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHT------------------------ 243 (538)
Q Consensus 189 ~~~liNG~~~~-~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~------------------------ 243 (538)
..+.+||+.+. ...+.++.|++++|.|.|.+.. .|.||||||.|+|++.+|...
T Consensus 459 ~~~~~n~~~~~~~~~~~~~~g~~~~w~i~N~~~~-~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (612)
T 3gyr_A 459 KTYRRTARTFNDGLGFTIGEGTHEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPL 537 (612)
T ss_dssp EEEEEEECSTTSCCCEEEETTCEEEEEEEECSSS-CEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCC
T ss_pred ccccccCccCCCCcceEeCCCCEEEEEEEcCCCC-CcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCc
Confidence 45788888753 4678899999999999999876 799999999999998876422
Q ss_pred ---ccceecEEEEcCCCeEEEEEEeCCCCcceEEEEEee
Q 009283 244 ---LQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTR 279 (538)
Q Consensus 244 ---~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 279 (538)
++..+|++.+.+|+.+.|.+++.+.+|.|.++|+..
T Consensus 538 ~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil 576 (612)
T 3gyr_A 538 APNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLL 576 (612)
T ss_dssp CTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSH
T ss_pred ccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCCh
Confidence 122479999999999999999655899999999874
No 80
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.94 E-value=8.2e-09 Score=90.52 Aligned_cols=91 Identities=15% Similarity=0.149 Sum_probs=66.9
Q ss_pred CcCceEEEecCCEEEEEEEe--CCCCCceeeecccc------------CC----CCCCCCCCC--CCCCCCCCCCeEEEE
Q 009283 54 FPGPSIEAVTNDNLIISVFN--ALDEPFLISWNGVQ------------QR----RNSWQDGVY--GTNCPIPPGKNFTYV 113 (538)
Q Consensus 54 ~pgP~i~v~~Gd~v~v~~~N--~l~~~~siH~HG~~------------~~----~~~~~DG~~--~tq~~i~pG~~~~Y~ 113 (538)
|-.+.|+|++||+|+++++| .....++++.+... .. .-+..|... .....|.||++.++.
T Consensus 30 F~P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~~ 109 (140)
T 1qhq_A 30 FAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVT 109 (140)
T ss_dssp BSCSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEE
T ss_pred EeCCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEEE
Confidence 33479999999999999999 66678888877310 00 000001111 012458999999999
Q ss_pred EEecCCccceeeecCchhhhhcceeeEEEEec
Q 009283 114 LQVKDQIGSYFYFPSLAFHKAAGGYGGIKIAS 145 (538)
Q Consensus 114 f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 145 (538)
|++ +++|+|||||+...|...||.|.|+|.+
T Consensus 110 ~~~-~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 110 FRT-PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp EEC-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEe-CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 998 5899999999998888899999999974
No 81
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.91 E-value=2.9e-09 Score=88.65 Aligned_cols=85 Identities=14% Similarity=0.081 Sum_probs=64.0
Q ss_pred EEEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEc-cCcc
Q 009283 410 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPL-DNVG 488 (538)
Q Consensus 410 ~~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~a-dnpG 488 (538)
..++++.|++|+|+ |.+...|+||+|+..+.. . .|. .. ....+|++.+.||+...+.|.+ +.||
T Consensus 20 ~~i~v~~Gd~V~~~--n~~~~~H~~~~~~~~~~~--~-~g~----~~------~~~~~~~~~~~pG~~~~~~f~~~~~~G 84 (106)
T 2gim_A 20 AKLTIKPGDTVEFL--NNKVPPHNVVFDAALNPA--K-SAD----LA------KSLSHKQLLMSPGQSTSTTFPADAPAG 84 (106)
T ss_dssp SEEEECTTCEEEEE--ECSSSCCCBEECSSSSTT--C-CHH----HH------HHHCBCSCCCSTTCEEEEECCTTCCSE
T ss_pred CEEEECCCCEEEEE--ECCCCCceEEEeCCCCcc--c-ccc----cc------hhccccceeeCCCCEEEEEEecCCCCc
Confidence 34678999999886 777778999999765421 0 000 00 0011477889999999999988 7999
Q ss_pred eeeeeecchhhhhcceEEEEEEe
Q 009283 489 MWNIRSENWARQYLGQQFYLRVY 511 (538)
Q Consensus 489 ~w~~HCHil~H~d~GMm~~~~V~ 511 (538)
.|.|||| .|.+.||++.+.|.
T Consensus 85 ~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 85 EYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp EEEEECT--TTGGGTCEEEEEEC
T ss_pred eEEEEeC--ChhhcCcEEEEEEc
Confidence 9999999 69999999999885
No 82
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.87 E-value=5.8e-09 Score=85.85 Aligned_cols=79 Identities=14% Similarity=0.179 Sum_probs=63.4
Q ss_pred cCcCcCceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCCCCCCCCCCCeEEEEEEecCCccceeeecCch
Q 009283 51 NGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLA 130 (538)
Q Consensus 51 Ng~~pgP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~ 130 (538)
|..|-...|++++||+|++.++|.....+++...+.... ..+.||++.+|.|+. +++|+|.|+|.
T Consensus 22 ~~~F~P~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~~------------~~~~pg~~~~~~~t~-~~~G~Y~y~C~-- 86 (100)
T 4hci_A 22 DDYFNPNVITIPINESTTLLLKNKGKSEHTFTIKKLGID------------VVVESGKEKNITVKP-KSAGTYELICR-- 86 (100)
T ss_dssp TTEEESSEEEECTTSCEEEEEEECSSSCEEEEEGGGTEE------------EEECTTCEEEEEECC-CSCEEEEEECT--
T ss_pred CCEEeCCEEEECCCCEEEEEEEcCCCceEEEEEecCCcc------------eeecCCcceeEEEec-ccCceEEEECc--
Confidence 444544689999999999999999767766666554221 347999999999998 68999999996
Q ss_pred hhhhcceeeEEEEe
Q 009283 131 FHKAAGGYGGIKIA 144 (538)
Q Consensus 131 ~q~~~Gl~G~liV~ 144 (538)
.|...||.|.|+|+
T Consensus 87 ~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 87 YHLLKGMEGKVIVK 100 (100)
T ss_dssp TTGGGTCEEEEEEC
T ss_pred cccCCCCEEEEEEC
Confidence 46678999999995
No 83
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.83 E-value=2.9e-09 Score=87.29 Aligned_cols=79 Identities=18% Similarity=0.278 Sum_probs=59.0
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCC--CCCCCCCCCCCCeEEEEEEecCCccceeeecCchhhhh
Q 009283 57 PSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDG--VYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKA 134 (538)
Q Consensus 57 P~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG--~~~tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~ 134 (538)
+.|++++||+|+ ++|....++++|+|+...+. ..|. .+.....+.||+++++.|+ ++|+|+|||+ .|..
T Consensus 18 ~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~p~--~~~~~~~~~~~~~~~pG~~~~~tf~---~~G~y~y~C~--~H~~ 88 (98)
T 2plt_A 18 KTLTIKSGETVN--FVNNAGFPHNIVFDEDAIPS--GVNADAISRDDYLNAPGETYSVKLT---AAGEYGYYCE--PHQG 88 (98)
T ss_dssp SEEEECTTCEEE--EEECSSCCEEEEECGGGSCT--TCCHHHHCEEEEECSTTCEEEEECC---SCEEEEEECG--GGGG
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCCC--ccccccccccceecCCCCEEEEEeC---CCeEEEEEcC--Cccc
Confidence 789999999875 58987778999999864321 1111 0001235899999999774 6999999999 5777
Q ss_pred cceeeEEEEe
Q 009283 135 AGGYGGIKIA 144 (538)
Q Consensus 135 ~Gl~G~liV~ 144 (538)
.||.|.|+|+
T Consensus 89 ~gM~G~i~V~ 98 (98)
T 2plt_A 89 AGMVGKIIVQ 98 (98)
T ss_dssp GTCEEEEEEC
T ss_pred cCCeEEEEEC
Confidence 8999999984
No 84
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.81 E-value=1.2e-08 Score=88.41 Aligned_cols=78 Identities=13% Similarity=0.191 Sum_probs=56.1
Q ss_pred cCcCcCceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCC-CCCCCCCCCeEEEEEEecCCccceeeecCc
Q 009283 51 NGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSL 129 (538)
Q Consensus 51 Ng~~pgP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~ 129 (538)
+..|-.+.|++++||+|++ +|....++++++... .+|... ....+.||++++|.| +++|+|+|||-.
T Consensus 54 ~~~F~P~~i~V~~GdtV~~--~N~d~~~H~v~~~~~-------~~g~~~~~s~~l~pG~t~~~tF---~~~G~y~y~C~~ 121 (132)
T 3c75_A 54 KMKYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKG-------IVGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTP 121 (132)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred eeEEeCCEEEECCCCEEEE--EECCCCceEEEEeCC-------CCCcccccccccCCCCEEEEEc---CCCEEEEEEeCC
Confidence 3444447999999999765 588766777766432 122222 334589999999888 379999999975
Q ss_pred hhhhhcceeeEEEEe
Q 009283 130 AFHKAAGGYGGIKIA 144 (538)
Q Consensus 130 ~~q~~~Gl~G~liV~ 144 (538)
+ . ||.|.|+|+
T Consensus 122 H--~--gM~G~I~V~ 132 (132)
T 3c75_A 122 H--P--FMRGKVIVE 132 (132)
T ss_dssp C--T--TCEEEEEEC
T ss_pred C--c--CCEEEEEEC
Confidence 2 2 999999984
No 85
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.76 E-value=3.6e-09 Score=86.72 Aligned_cols=81 Identities=16% Similarity=0.260 Sum_probs=57.8
Q ss_pred CceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCCCCCCCCCCCeEEEEEEecCCccceeeecCchhhhhc
Q 009283 56 GPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAA 135 (538)
Q Consensus 56 gP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 135 (538)
.+.|++++||+|++ +|....+++++.++...++. ..++.......+.||+++++.| +++|+|+|||+ .|...
T Consensus 18 P~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~pg~-~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~~~C~--~H~~~ 89 (98)
T 1pcs_A 18 PSTVTIKAGEEVKW--VNNKLSPHNIVFDADGVPAD-TAAKLSHKGLLFAAGESFTSTF---TEPGTYTYYCE--PHRGA 89 (98)
T ss_dssp SSEEEECTTCEEEE--EECSSCCEEEEECCSSSCHH-HHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECG--GGTTT
T ss_pred CCEEEECCCCEEEE--EECCCCCcEEEEeCCCCCcc-ccccccccccccCCCCEEEEEc---CCCeEEEEEcC--Ccccc
Confidence 36899999998765 58766788888887532100 0000001124589999999987 37999999999 67778
Q ss_pred ceeeEEEEe
Q 009283 136 GGYGGIKIA 144 (538)
Q Consensus 136 Gl~G~liV~ 144 (538)
||.|.|+|+
T Consensus 90 gM~G~i~V~ 98 (98)
T 1pcs_A 90 GMVGKVVVE 98 (98)
T ss_dssp TCEEEEEEC
T ss_pred CCeEEEEEC
Confidence 999999984
No 86
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.76 E-value=1.8e-08 Score=88.31 Aligned_cols=96 Identities=11% Similarity=0.023 Sum_probs=71.2
Q ss_pred EEEccCCcEEEEEEEc--CCCCCCCccccCC--CceEEee-c-----CCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEE
Q 009283 411 VMAADFRGFAEVVFEN--PEDTLQSWHIDGH--NFFAVGM-D-----GGEWTPASRLTYNLRDTISRCTVQVYPKSWTAV 480 (538)
Q Consensus 411 ~~~~~~g~~v~~~l~N--~~~~~HP~HlHG~--~F~Vl~~-~-----~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~i 480 (538)
.++++.|++|+|++.| .+.+.|.||++.. .+.-+.. + ...+-+.. -....+++|..|.|++...+
T Consensus 34 ~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~t~~l~pG~~~~~ 108 (140)
T 1qhq_A 34 SLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPP-----DTPNALAWTAMLNAGESGSV 108 (140)
T ss_dssp EEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCT-----TCTTEEEECCCBCTTEEEEE
T ss_pred eEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCcc-----ccccccccceeeCCCceeEE
Confidence 3678899999999999 6668899999853 2211100 0 00010000 01235789999999999999
Q ss_pred EEEccCcceeeeeecchhhhhcceEEEEEEe
Q 009283 481 YVPLDNVGMWNIRSENWARQYLGQQFYLRVY 511 (538)
Q Consensus 481 rf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 511 (538)
.|.++.||.|.|||++..|...||...+.|.
T Consensus 109 ~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 109 TFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred EEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 9999999999999999999999999999885
No 87
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.74 E-value=2e-08 Score=80.91 Aligned_cols=74 Identities=23% Similarity=0.385 Sum_probs=56.0
Q ss_pred CceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCCCCCCCCCCCeEEEEEEecCCccceeeecCchhhhhc
Q 009283 56 GPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAA 135 (538)
Q Consensus 56 gP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 135 (538)
.+.|++++||+|++ +|.....++++.++.. . .. .....+.||+++++.| +++|+|||||+ .+...
T Consensus 18 P~~i~v~~Gd~V~~--~n~~~~~H~v~~~~~~---~-~~----~~~~~~~~g~~~~~~f---~~~G~y~~~C~--~H~~~ 82 (91)
T 1bxv_A 18 PSTIEIQAGDTVQW--VNNKLAPHNVVVEGQP---E-LS----HKDLAFSPGETFEATF---SEPGTYTYYCE--PHRGA 82 (91)
T ss_dssp SSEEEECTTCEEEE--EECSSCCEEEEETTCG---G-GC----EEEEECSTTCEEEEEC---CSCEEEEEECT--TTGGG
T ss_pred CCEEEECCCCEEEE--EECCCCCcEEEEeCCC---c-cC----cccceeCCCCEEEEEe---CCCEEEEEEeC--CCccC
Confidence 47899999999765 5876678888888721 0 00 0124589999988877 47999999999 56667
Q ss_pred ceeeEEEEe
Q 009283 136 GGYGGIKIA 144 (538)
Q Consensus 136 Gl~G~liV~ 144 (538)
||.|.|+|+
T Consensus 83 gM~g~i~V~ 91 (91)
T 1bxv_A 83 GMVGKIVVQ 91 (91)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEEC
Confidence 999999984
No 88
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.73 E-value=1.3e-08 Score=83.35 Aligned_cols=78 Identities=10% Similarity=-0.052 Sum_probs=60.5
Q ss_pred EEEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCc-eeeEEeCCCCEEEEEEEccCcc
Q 009283 410 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTIS-RCTVQVYPKSWTAVYVPLDNVG 488 (538)
Q Consensus 410 ~~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~-rDTv~vp~~g~~~irf~adnpG 488 (538)
..++++.|++|.|+ |.+...|.+|+|+..+- +.. .+.| +|+..+.||+...+.| +.||
T Consensus 19 ~~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~p--g~~---------------~~~~~~~~~~~~pG~~~~~tf--~~~G 77 (98)
T 1pcs_A 19 STVTIKAGEEVKWV--NNKLSPHNIVFDADGVP--ADT---------------AAKLSHKGLLFAAGESFTSTF--TEPG 77 (98)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEECCSSSC--HHH---------------HHHHCEEEEECSTTCEEEEEC--CSCE
T ss_pred CEEEECCCCEEEEE--ECCCCCcEEEEeCCCCC--ccc---------------cccccccccccCCCCEEEEEc--CCCe
Confidence 34788999999887 66667899999874321 100 0112 5789999999988866 7999
Q ss_pred eeeeeecchhhhhcceEEEEEE
Q 009283 489 MWNIRSENWARQYLGQQFYLRV 510 (538)
Q Consensus 489 ~w~~HCHil~H~d~GMm~~~~V 510 (538)
.|.|||| .|...||++.+.|
T Consensus 78 ~y~~~C~--~H~~~gM~G~i~V 97 (98)
T 1pcs_A 78 TYTYYCE--PHRGAGMVGKVVV 97 (98)
T ss_dssp EEEEECG--GGTTTTCEEEEEE
T ss_pred EEEEEcC--CccccCCeEEEEE
Confidence 9999999 5999999999987
No 89
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.67 E-value=6e-08 Score=79.14 Aligned_cols=76 Identities=20% Similarity=0.368 Sum_probs=56.9
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCC---CCCCCCCCCCeEEEEEEecCCccceeeecCchhhh
Q 009283 57 PSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVY---GTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHK 133 (538)
Q Consensus 57 P~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~---~tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~ 133 (538)
+.|++++||+| +++|....+++++.++.... +|.. .....+.||+++++.| +++|+|+|||+ .|.
T Consensus 19 ~~i~v~~G~~V--~~~n~~~~~H~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~--~H~ 86 (97)
T 1b3i_A 19 KALSISAGDTV--EFVMNKVGPHNVIFDKVPAG-----ESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCT--PHR 86 (97)
T ss_dssp SEEEECTTCEE--EEEECSSCCCCBEEEECCTT-----SCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECS--STT
T ss_pred CEEEECCCCEE--EEEECCCCCeEEEEeCCCCc-----cccccccccceecCCCCEEEEEe---CCCeEEEEEcc--Chh
Confidence 68999999985 55687666788888775321 1110 1124589999999987 47999999999 677
Q ss_pred hcceeeEEEEe
Q 009283 134 AAGGYGGIKIA 144 (538)
Q Consensus 134 ~~Gl~G~liV~ 144 (538)
..||.|.|+|+
T Consensus 87 ~~gM~G~i~V~ 97 (97)
T 1b3i_A 87 GAGMVGTITVE 97 (97)
T ss_dssp TTTCEEEEEEC
T ss_pred hcCCEEEEEEC
Confidence 78999999984
No 90
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.67 E-value=5.4e-08 Score=79.55 Aligned_cols=80 Identities=16% Similarity=0.065 Sum_probs=60.9
Q ss_pred EEEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEccCcce
Q 009283 410 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 489 (538)
Q Consensus 410 ~~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~ 489 (538)
..++++.|++|+| .|.+...|.+|+|+..+ ...++. ...++|+..+.||+...++| +.||.
T Consensus 18 ~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~------p~~~~~---------~~~~~~~~~~~pG~~~~~tf--~~~G~ 78 (98)
T 2plt_A 18 KTLTIKSGETVNF--VNNAGFPHNIVFDEDAI------PSGVNA---------DAISRDDYLNAPGETYSVKL--TAAGE 78 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECGGGS------CTTCCH---------HHHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCceEEEEeCCCC------CCcccc---------ccccccceecCCCCEEEEEe--CCCeE
Confidence 3578899999987 67777789999997422 000000 01257899999999988866 58999
Q ss_pred eeeeecchhhhhcceEEEEEE
Q 009283 490 WNIRSENWARQYLGQQFYLRV 510 (538)
Q Consensus 490 w~~HCHil~H~d~GMm~~~~V 510 (538)
|.|||| .|.+.||++.+.|
T Consensus 79 y~y~C~--~H~~~gM~G~i~V 97 (98)
T 2plt_A 79 YGYYCE--PHQGAGMVGKIIV 97 (98)
T ss_dssp EEEECG--GGGGGTCEEEEEE
T ss_pred EEEEcC--CccccCCeEEEEE
Confidence 999999 5999999999987
No 91
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.66 E-value=5.1e-08 Score=80.37 Aligned_cols=79 Identities=13% Similarity=0.110 Sum_probs=56.2
Q ss_pred CceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCC--------CCCCCCCCCCCCCCCeEEEEEEecCCccceeeec
Q 009283 56 GPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSW--------QDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFP 127 (538)
Q Consensus 56 gP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~--------~DG~~~tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~ 127 (538)
-+.|++++||+|+ ++|....+++++++.- .... +.+.......+.||+++++.| +++|+|+|||
T Consensus 16 P~~i~v~~G~tV~--~~n~~~~~H~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C 87 (102)
T 1kdj_A 16 PDSITVSAGEAVE--FTLVGETGHNIVFDIP---AGAPGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTFYC 87 (102)
T ss_dssp SSEEEECTTCCEE--EEECSSSCBCCEECCC---TTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEEEC
T ss_pred CCEEEECCCCEEE--EEECCCCCeEEEEeCc---ccccccccchhhcccccccceecCCCCEEEEEe---CCCeEEEEEe
Confidence 3789999999976 5688666777777631 0000 001101123589999999987 4799999999
Q ss_pred CchhhhhcceeeEEEEe
Q 009283 128 SLAFHKAAGGYGGIKIA 144 (538)
Q Consensus 128 H~~~q~~~Gl~G~liV~ 144 (538)
+ .|...||.|.|+|+
T Consensus 88 ~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 88 T--PHKSANMKGTLTVK 102 (102)
T ss_dssp S--TTGGGTCEEEEEEC
T ss_pred C--CCcccCCeEEEEEC
Confidence 9 77788999999984
No 92
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.63 E-value=8.5e-08 Score=81.61 Aligned_cols=75 Identities=13% Similarity=0.096 Sum_probs=53.6
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCCCCCCCCCCCeEEEEEEecCCccceeeecCchhhhhcc
Q 009283 57 PSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAG 136 (538)
Q Consensus 57 P~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~G 136 (538)
..|++++||+|++.++|. ++++..+.. ..-+|. ....+.||++++|.| +++|+|||+|. .|...|
T Consensus 21 ~~i~V~~GdtV~f~~~~~---~H~v~~~~~-----~~P~g~--~~f~~~pg~t~s~TF---~~pG~y~y~C~--~H~~~G 85 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDK---SHNVEAIKE-----ILPEGV--ESFKSKINESYTLTV---TEPGLYGVKCT--PHFGMG 85 (123)
T ss_dssp SEEEECTTEEEEEEESST---TCCCEECTT-----SSCTTC--CCCBCCTTCCEEEEE---CSCEEEEEECG--GGTTTT
T ss_pred CEEEECCCCEEEEEECCC---CceEEEcCC-----cCCCCc--cceecCCCCEEEEEe---CCCeEEEEEeC--CCCcCC
Confidence 799999999988777762 334333321 111232 123467999988888 37999999998 677789
Q ss_pred eeeEEEEecC
Q 009283 137 GYGGIKIASR 146 (538)
Q Consensus 137 l~G~liV~~~ 146 (538)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 3erx_A 86 MVGLVQVGDA 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred cEEEEEECCC
Confidence 9999999863
No 93
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.62 E-value=8.9e-08 Score=77.06 Aligned_cols=72 Identities=14% Similarity=0.101 Sum_probs=57.8
Q ss_pred EEEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEccCcce
Q 009283 410 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 489 (538)
Q Consensus 410 ~~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~ 489 (538)
..++++.|++|.|+ |.+...|.+|+|+. . +...++..+.||+...+.| +.||.
T Consensus 19 ~~i~v~~Gd~V~~~--n~~~~~H~v~~~~~---------~--------------~~~~~~~~~~~g~~~~~~f--~~~G~ 71 (91)
T 1bxv_A 19 STIEIQAGDTVQWV--NNKLAPHNVVVEGQ---------P--------------ELSHKDLAFSPGETFEATF--SEPGT 71 (91)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEETTC---------G--------------GGCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCCcEEEEeCC---------C--------------ccCcccceeCCCCEEEEEe--CCCEE
Confidence 34678999999876 66667899998872 0 0125778899999888766 89999
Q ss_pred eeeeecchhhhhcceEEEEEE
Q 009283 490 WNIRSENWARQYLGQQFYLRV 510 (538)
Q Consensus 490 w~~HCHil~H~d~GMm~~~~V 510 (538)
|.|||| .|...||.+.+.|
T Consensus 72 y~~~C~--~H~~~gM~g~i~V 90 (91)
T 1bxv_A 72 YTYYCE--PHRGAGMVGKIVV 90 (91)
T ss_dssp EEEECT--TTGGGTCEEEEEE
T ss_pred EEEEeC--CCccCCCEEEEEE
Confidence 999999 5999999999987
No 94
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.61 E-value=1.4e-07 Score=77.22 Aligned_cols=76 Identities=17% Similarity=0.332 Sum_probs=57.4
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCC-------CCCCCCCCCCeEEEEEEecCCccceeeecCc
Q 009283 57 PSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVY-------GTNCPIPPGKNFTYVLQVKDQIGSYFYFPSL 129 (538)
Q Consensus 57 P~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~-------~tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~ 129 (538)
+.|++++||+| +++|....++++++++...+ +|.. .....+.||+++++.|+ ++|+|+|||+
T Consensus 17 ~~i~v~~G~tV--~~~n~~~~~H~~~~~~~~~p-----~g~~~~~~~~~~~~~~~~~G~~~~~~f~---~~G~y~~~C~- 85 (99)
T 1byp_A 17 SDLSIASGEKI--TFKNNAGFPHNDLFDKKEVP-----AGVDVTKISMPEEDLLNAPGEEYSVTLT---EKGTYKFYCA- 85 (99)
T ss_dssp SEEEECTTEEE--EEEECSSCCBCCEECTTSSC-----TTCCHHHHSCCTTCCBCSTTCEEEEEEC---SCEEEEEECG-
T ss_pred CEEEECCCCEE--EEEECCCCcceEEEeCCCCc-----cccccccccccccceeeCCCCEEEEEeC---CCcEEEEEcC-
Confidence 68999999985 55888777888888874321 2221 11235799999988774 6999999999
Q ss_pred hhhhhcceeeEEEEe
Q 009283 130 AFHKAAGGYGGIKIA 144 (538)
Q Consensus 130 ~~q~~~Gl~G~liV~ 144 (538)
.|...||.|.|+|+
T Consensus 86 -~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 86 -PHAGAGMVGKVTVN 99 (99)
T ss_dssp -GGTTTTCEEEEEEC
T ss_pred -CccccCCEEEEEEC
Confidence 67778999999984
No 95
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.61 E-value=1.4e-07 Score=77.19 Aligned_cols=77 Identities=19% Similarity=0.308 Sum_probs=57.1
Q ss_pred CceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCC-------CCCCCCCCCCeEEEEEEecCCccceeeecC
Q 009283 56 GPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVY-------GTNCPIPPGKNFTYVLQVKDQIGSYFYFPS 128 (538)
Q Consensus 56 gP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~-------~tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H 128 (538)
.+.|++++||+|+ ++|....+++++.++...+ +|.. .....+.||+++++.|+ ++|+|+|||+
T Consensus 16 P~~i~v~~G~tV~--~~n~~~~~H~v~~~~~~~p-----~~~~~~~~~~~~~~~~~~~G~~~~~tf~---~~G~y~~~C~ 85 (99)
T 1plc_A 16 PSEFSISPGEKIV--FKNNAGFPHNIVFDEDSIP-----SGVDASKISMSEEDLLNAKGETFEVALS---NKGEYSFYCS 85 (99)
T ss_dssp SSEEEECTTCEEE--EEECSSCCBCCEECTTSSC-----TTCCHHHHCCCTTCCBCSTTCEEEEECC---SCEEEEEECG
T ss_pred CCEEEECCCCEEE--EEECCCCceEEEEeCCCCc-----ccccccccccccCccccCCCCEEEEEEC---CCceEEEEcC
Confidence 3789999999865 5888767788887764221 1211 11134799999988773 6999999999
Q ss_pred chhhhhcceeeEEEEe
Q 009283 129 LAFHKAAGGYGGIKIA 144 (538)
Q Consensus 129 ~~~q~~~Gl~G~liV~ 144 (538)
.|...||.|.|+|+
T Consensus 86 --~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 86 --PHQGAGMVGKVTVN 99 (99)
T ss_dssp --GGTTTTCEEEEEEC
T ss_pred --CCcccCCEEEEEEC
Confidence 67778999999984
No 96
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.58 E-value=8e-08 Score=82.18 Aligned_cols=77 Identities=17% Similarity=0.146 Sum_probs=53.5
Q ss_pred CceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCCCCCCCCCCCeEEEEEEecCCccceeeecCchhhhhc
Q 009283 56 GPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAA 135 (538)
Q Consensus 56 gP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 135 (538)
.+.|++++||+|.+.++|. ++++..+... .-||. ....+.||++++|.| +++|+|||||. .|...
T Consensus 22 P~~i~V~~GDtVtf~n~~~---~H~v~~~~~~-----~P~g~--~~f~s~pGet~s~TF---~~pG~y~y~C~--~H~~~ 86 (127)
T 3tu6_A 22 PAVIRAQPGDTVTFVAKDK---GHNSALMKGG-----APEGA--ETWKGKINEEITVTL---SKPGVYMYQCA--PHVGM 86 (127)
T ss_dssp SSEEEECTTCEEEEECSSS---SCCCEECTTC-----SCTTC--CCCBCCTTCCCEEEC---CSCEEEEEECT--TTGGG
T ss_pred CCEEEECCCCEEEEEECCC---CceEEEccCc-----CCCCc--cceecCCCCEEEEEe---CCCeEEEEEeC--CCCcC
Confidence 3799999999977666553 3333332110 11221 123467999988888 37999999998 46778
Q ss_pred ceeeEEEEecCC
Q 009283 136 GGYGGIKIASRP 147 (538)
Q Consensus 136 Gl~G~liV~~~~ 147 (538)
||.|.|+|.++.
T Consensus 87 GM~G~I~V~~~~ 98 (127)
T 3tu6_A 87 GMIGAIVVGEPA 98 (127)
T ss_dssp TCEEEEEESSCT
T ss_pred CcEEEEEECcCC
Confidence 999999998754
No 97
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.58 E-value=1.2e-07 Score=80.51 Aligned_cols=75 Identities=11% Similarity=0.022 Sum_probs=53.5
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCCCCCCCCCCCeEEEEEEecCCccceeeecCchhhhhcc
Q 009283 57 PSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAG 136 (538)
Q Consensus 57 P~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~G 136 (538)
..|++++||+|.+ +|.. .++++..+.... -+|. ....+.||++++|.| +.+|+|||||- .|...|
T Consensus 22 ~~i~V~~GDTV~f--~n~~-~~Hnv~~~~~~~-----p~g~--~~~~~~pg~t~s~TF---~~~G~y~Y~C~--~H~~~G 86 (124)
T 3ef4_A 22 GFVKVEAGDTVKF--VPTD-KSHNAESVREVW-----PEGV--APVKGGFSKEVVFNA---EKEGLYVLKCA--PHYGMG 86 (124)
T ss_dssp SEEEECTTCEEEE--ECSS-SSCCCEECTTTS-----CTTS--CCCBCCTTCCEEEEC---CSSEEEEEECT--TTGGGT
T ss_pred CEEEECCCCEEEE--EECC-CCccEEEeCCcC-----CCCc--cccccCCCCEEEEEe---CCCeEEEEEcC--CCCcCC
Confidence 7999999999754 4553 455555542211 1222 123468999988888 36999999996 677789
Q ss_pred eeeEEEEecC
Q 009283 137 GYGGIKIASR 146 (538)
Q Consensus 137 l~G~liV~~~ 146 (538)
|.|.|+|.++
T Consensus 87 M~G~I~V~~p 96 (124)
T 3ef4_A 87 MVVLVQVGKP 96 (124)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEECCC
Confidence 9999999874
No 98
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.55 E-value=3.8e-08 Score=80.33 Aligned_cols=77 Identities=13% Similarity=0.081 Sum_probs=58.9
Q ss_pred EEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEccCccee
Q 009283 411 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 490 (538)
Q Consensus 411 ~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 490 (538)
.++++.|++|.|+ |.+...|.+++++..+. .+. . ...+++..+.||+...+.| +.||.|
T Consensus 20 ~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~~-----~~~------~------~~~~~~~~~~~g~~~~~tf--~~~G~y 78 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNKVGPHNVIFDKVPAG-----ESA------P------ALSNTKLAIAPGSFYSVTL--GTPGTY 78 (97)
T ss_dssp EEEECTTCEEEEE--ECSSCCCCBEEEECCTT-----SCH------H------HHCBCCCCCSCSCCEEEEC--CSCSEE
T ss_pred EEEECCCCEEEEE--ECCCCCeEEEEeCCCCc-----ccc------c------cccccceecCCCCEEEEEe--CCCeEE
Confidence 4678999998886 76667899999876551 000 0 0114677888999888866 899999
Q ss_pred eeeecchhhhhcceEEEEEE
Q 009283 491 NIRSENWARQYLGQQFYLRV 510 (538)
Q Consensus 491 ~~HCHil~H~d~GMm~~~~V 510 (538)
.|||+ .|.+.||.+.+.|
T Consensus 79 ~y~C~--~H~~~gM~G~i~V 96 (97)
T 1b3i_A 79 SFYCT--PHRGAGMVGTITV 96 (97)
T ss_dssp EEECS--STTTTTCEEEEEE
T ss_pred EEEcc--ChhhcCCEEEEEE
Confidence 99999 6999999999987
No 99
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.50 E-value=2.4e-07 Score=77.68 Aligned_cols=73 Identities=16% Similarity=0.181 Sum_probs=57.7
Q ss_pred EEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEccCccee
Q 009283 411 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 490 (538)
Q Consensus 411 ~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 490 (538)
.+.++.|+.|+|.+.|.+...|-|++... + -+..+.||+...+.|.++.||.|
T Consensus 39 ~i~v~~G~~V~~~~~n~d~~~H~~~i~~~---------~------------------~~~~i~pG~~~~~~f~~~~~G~y 91 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKSPISEGFSIDAF---------G------------------VQEVIKAGETKTISFTADKAGAF 91 (112)
T ss_dssp EEEEETTCEEEEEEEECSSSCEEEEEGGG---------T------------------EEEEECTTCEEEEEEECCSCEEE
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEcCC---------C------------------ceeEeCCCCEEEEEEECCCCEEE
Confidence 46789999999999999866454443311 0 25678999999999999999999
Q ss_pred eeeecchhhhhcceEEEEEEe
Q 009283 491 NIRSENWARQYLGQQFYLRVY 511 (538)
Q Consensus 491 ~~HCHil~H~d~GMm~~~~V~ 511 (538)
.||||+..|... |.+.+.|.
T Consensus 92 ~~~C~~~~~~~~-M~g~i~V~ 111 (112)
T 1iby_A 92 TIWCQLHPKNIH-LPGTLNVV 111 (112)
T ss_dssp EEBCSSSCTTTB-CCEEEEEE
T ss_pred EEECCCCCchHH-CEEEEEEe
Confidence 999999776544 88888885
No 100
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.44 E-value=4.8e-07 Score=74.01 Aligned_cols=82 Identities=11% Similarity=0.029 Sum_probs=59.7
Q ss_pred EEEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEccCcce
Q 009283 410 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 489 (538)
Q Consensus 410 ~~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~ 489 (538)
..++++.|++|.| .|.+...|.+|+++..|. .+ ++.. .. ...+|++.+.||+...+.| +.||.
T Consensus 17 ~~i~v~~G~tV~~--~n~~~~~H~~~~~~~~~p-----~g-~~~~-----~~--~~~~~~~~~~~G~~~~~~f--~~~G~ 79 (99)
T 1byp_A 17 SDLSIASGEKITF--KNNAGFPHNDLFDKKEVP-----AG-VDVT-----KI--SMPEEDLLNAPGEEYSVTL--TEKGT 79 (99)
T ss_dssp SEEEECTTEEEEE--EECSSCCBCCEECTTSSC-----TT-CCHH-----HH--SCCTTCCBCSTTCEEEEEE--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCcceEEEeCCCCc-----cc-cccc-----cc--cccccceeeCCCCEEEEEe--CCCcE
Confidence 4578899999887 677777899999975441 00 0000 00 0124667788999888866 58999
Q ss_pred eeeeecchhhhhcceEEEEEE
Q 009283 490 WNIRSENWARQYLGQQFYLRV 510 (538)
Q Consensus 490 w~~HCHil~H~d~GMm~~~~V 510 (538)
|.|||+ .|.+.||.+.+.|
T Consensus 80 y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1byp_A 80 YKFYCA--PHAGAGMVGKVTV 98 (99)
T ss_dssp EEEECG--GGTTTTCEEEEEE
T ss_pred EEEEcC--CccccCCEEEEEE
Confidence 999999 5999999999987
No 101
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.38 E-value=8.7e-07 Score=72.65 Aligned_cols=71 Identities=13% Similarity=0.140 Sum_probs=58.5
Q ss_pred EEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEccCccee
Q 009283 411 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 490 (538)
Q Consensus 411 ~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 490 (538)
.++++.|++|.|++.|.+...|.|.+.+.. -...+.||+...+.|.++.||.|
T Consensus 29 ~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~---------------------------~~~~~~pg~~~~~~~t~~~~G~Y 81 (100)
T 4hci_A 29 VITIPINESTTLLLKNKGKSEHTFTIKKLG---------------------------IDVVVESGKEKNITVKPKSAGTY 81 (100)
T ss_dssp EEEECTTSCEEEEEEECSSSCEEEEEGGGT---------------------------EEEEECTTCEEEEEECCCSCEEE
T ss_pred EEEECCCCEEEEEEEcCCCceEEEEEecCC---------------------------cceeecCCcceeEEEecccCceE
Confidence 467899999999999998777776654321 12356788999999999999999
Q ss_pred eeeecchhhhhcceEEEEEE
Q 009283 491 NIRSENWARQYLGQQFYLRV 510 (538)
Q Consensus 491 ~~HCHil~H~d~GMm~~~~V 510 (538)
.|+|.. |...||.+.+.|
T Consensus 82 ~y~C~~--H~~~gM~G~i~V 99 (100)
T 4hci_A 82 ELICRY--HLLKGMEGKVIV 99 (100)
T ss_dssp EEECTT--TGGGTCEEEEEE
T ss_pred EEECcc--ccCCCCEEEEEE
Confidence 999985 999999999887
No 102
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.36 E-value=4.6e-07 Score=74.04 Aligned_cols=77 Identities=18% Similarity=0.171 Sum_probs=54.4
Q ss_pred CceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCC-----CCCCCCCCCCeEEEEEEecCCccceeeecCch
Q 009283 56 GPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVY-----GTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLA 130 (538)
Q Consensus 56 gP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~-----~tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~ 130 (538)
.+.|++++||+|++ +|.....+++....-.. -+|.- .....+.||+++++.| +++|+|+|+|..
T Consensus 17 P~~i~v~~GdtV~~--~n~~~~~H~v~~~~~~~-----p~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~- 85 (98)
T 1iuz_A 17 PSKISVAAGEAIEF--VNNAGFPHNIVFDEDAV-----PAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCEP- 85 (98)
T ss_dssp SSEEEECTTCEEEE--EECSSCCEEEEECTTSS-----CTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECTT-
T ss_pred CCEEEECCCCEEEE--EECCCCCEEEEEeCCCC-----ccccccccccccccccCCCCEEEEEc---CCCEEEEEEchh-
Confidence 47899999999655 58766677776654211 12221 0012489999998887 379999999974
Q ss_pred hhhhcceeeEEEEe
Q 009283 131 FHKAAGGYGGIKIA 144 (538)
Q Consensus 131 ~q~~~Gl~G~liV~ 144 (538)
|...||.|.|+|+
T Consensus 86 -H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 86 -HAGAGMKMTITVQ 98 (98)
T ss_dssp -TGGGTCEEEEEEC
T ss_pred -hccCCCEEEEEEC
Confidence 6667999999984
No 103
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.35 E-value=4.7e-07 Score=74.50 Aligned_cols=84 Identities=10% Similarity=-0.040 Sum_probs=58.3
Q ss_pred EEEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCc-eeeEEeCCCCEEEEEEEccCcc
Q 009283 410 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTIS-RCTVQVYPKSWTAVYVPLDNVG 488 (538)
Q Consensus 410 ~~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~-rDTv~vp~~g~~~irf~adnpG 488 (538)
..++++.|++|+|+ |.+...|.++++.-...- +.+... . ..+.+ .+++.+.||+...+.| +.||
T Consensus 17 ~~i~v~~G~tV~~~--n~~~~~H~~~~~~~~~~~-----~~~~~~-----~-~~~~~~~~~~~~~pG~~~~~tf--~~~G 81 (102)
T 1kdj_A 17 DSITVSAGEAVEFT--LVGETGHNIVFDIPAGAP-----GTVASE-----L-KAASMDENDLLSEDEPSFKAKV--STPG 81 (102)
T ss_dssp SEEEECTTCCEEEE--ECSSSCBCCEECCCTTCC-----HHHHHH-----H-HHTSCCTTCCBBTTBCEEEECC--CSCE
T ss_pred CEEEECCCCEEEEE--ECCCCCeEEEEeCccccc-----ccccch-----h-hcccccccceecCCCCEEEEEe--CCCe
Confidence 45788999999876 777678999987311100 000000 0 00122 3677788999888866 8999
Q ss_pred eeeeeecchhhhhcceEEEEEE
Q 009283 489 MWNIRSENWARQYLGQQFYLRV 510 (538)
Q Consensus 489 ~w~~HCHil~H~d~GMm~~~~V 510 (538)
.|.|||+ .|...||.+.+.|
T Consensus 82 ~y~y~C~--~H~~~gM~G~i~V 101 (102)
T 1kdj_A 82 TYTFYCT--PHKSANMKGTLTV 101 (102)
T ss_dssp EEEEECS--TTGGGTCEEEEEE
T ss_pred EEEEEeC--CCcccCCeEEEEE
Confidence 9999999 6999999999987
No 104
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.34 E-value=1.2e-06 Score=74.52 Aligned_cols=76 Identities=16% Similarity=0.133 Sum_probs=50.8
Q ss_pred CceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCCCCCCCCCCCeEEEEEEecCCccceeeecCchhhhhc
Q 009283 56 GPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAA 135 (538)
Q Consensus 56 gP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 135 (538)
.+.|++++||+|++ +|... ++++..+- ...-||.. .....||++++|.| +++|+|||+|. .|...
T Consensus 20 P~~i~V~~GdtV~f--~~~~~-~H~v~~~~-----~~~p~~~~--~~~~~pG~t~~~tF---~~~G~y~y~C~--~H~~~ 84 (123)
T 1paz_A 20 PAYIKANPGDTVTF--IPVDK-GHNVESIK-----DMIPEGAE--KFKSKINENYVLTV---TQPGAYLVKCT--PHYAM 84 (123)
T ss_dssp SSEEEECTTCEEEE--EESSS-SCCCEECT-----TCSCTTCC--CCBCCTTCCEEEEC---CSCEEEEEECT--TTGGG
T ss_pred CCEEEECCCCEEEE--EECCC-CeEEEEec-----ccCCCCcc--ceecCCCCEEEEEe---CCCEEEEEEeC--CcccC
Confidence 37999999999755 55432 44433321 11112221 12356999888777 37999999997 46778
Q ss_pred ceeeEEEEecC
Q 009283 136 GGYGGIKIASR 146 (538)
Q Consensus 136 Gl~G~liV~~~ 146 (538)
||.|.|+|.++
T Consensus 85 gM~G~I~V~~~ 95 (123)
T 1paz_A 85 GMIALIAVGDS 95 (123)
T ss_dssp TCEEEEEESSS
T ss_pred CCEEEEEEcCC
Confidence 99999999874
No 105
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.28 E-value=1.9e-06 Score=73.89 Aligned_cols=91 Identities=15% Similarity=0.075 Sum_probs=60.5
Q ss_pred CcCceEEEecC-CEEEEEEEeCCCCC-----cee--eeccccC-------C-C-----CCCCCCCCC-CCCCCCCCCeEE
Q 009283 54 FPGPSIEAVTN-DNLIISVFNALDEP-----FLI--SWNGVQQ-------R-R-----NSWQDGVYG-TNCPIPPGKNFT 111 (538)
Q Consensus 54 ~pgP~i~v~~G-d~v~v~~~N~l~~~-----~si--H~HG~~~-------~-~-----~~~~DG~~~-tq~~i~pG~~~~ 111 (538)
|--..|.|++| |+|+|+|+|....+ +++ --+|... . + .+..|..-. ....|.||++.+
T Consensus 15 F~p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~s 94 (129)
T 1cuo_A 15 YSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTS 94 (129)
T ss_dssp CSCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEE
T ss_pred EccCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEEE
Confidence 43358999999 99999999986432 332 2222100 0 0 000111111 123589999999
Q ss_pred EEEEec--CCccceeeecCchhhhhcceeeEEEEec
Q 009283 112 YVLQVK--DQIGSYFYFPSLAFHKAAGGYGGIKIAS 145 (538)
Q Consensus 112 Y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 145 (538)
+.|+++ .++|+|||.|-...|.. ||.|.|+|.+
T Consensus 95 vtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~~ 129 (129)
T 1cuo_A 95 VKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLEE 129 (129)
T ss_dssp EEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEEC
T ss_pred EEEeccccCCCceEEEEeCCCCchH-cCEEEEEEeC
Confidence 999984 37999999998777777 8999999963
No 106
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.28 E-value=1.5e-06 Score=73.94 Aligned_cols=76 Identities=12% Similarity=0.070 Sum_probs=51.1
Q ss_pred CceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCCCCCCCCCCCeEEEEEEecCCccceeeecCchhhhhc
Q 009283 56 GPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAA 135 (538)
Q Consensus 56 gP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 135 (538)
.+.|++++||+|+ ++|... ++++..+. ...-||.. ...+.||++++|.| +++|+|+|+|. .|...
T Consensus 20 P~~i~V~~GdtV~--f~n~~~-~H~v~~~~-----~~~p~~~~--~~~~~pG~t~~~tF---~~~G~y~y~C~--~H~~~ 84 (123)
T 1pmy_A 20 PALVRLKPGDSIK--FLPTDK-GHNVETIK-----GMAPDGAD--YVKTTVGQEAVVKF---DKEGVYGFKCA--PHYMM 84 (123)
T ss_dssp SSEEEECTTCEEE--EECSSS-SCCCEECT-----TSSCTTCC--CCBCCTTSCEEEEC---CSCEEEEEECS--TTTTT
T ss_pred CCEEEECCCCEEE--EEECCC-CcEEEEec-----ccCCCCcc--ceecCCCCEEEEEe---CCCeEEEEEeC--Ccccc
Confidence 3799999999965 555532 43333321 11112221 13467999988877 36999999997 46678
Q ss_pred ceeeEEEEecC
Q 009283 136 GGYGGIKIASR 146 (538)
Q Consensus 136 Gl~G~liV~~~ 146 (538)
||.|.|+|.++
T Consensus 85 gM~G~I~V~~~ 95 (123)
T 1pmy_A 85 GMVALVVVGDK 95 (123)
T ss_dssp TCEEEEEESSC
T ss_pred CCEEEEEEcCC
Confidence 99999999864
No 107
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.19 E-value=8.8e-06 Score=67.33 Aligned_cols=76 Identities=13% Similarity=0.207 Sum_probs=52.2
Q ss_pred cCcCceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCC-CCCCCCCCCeEEEEEEecCCccceeeecCchh
Q 009283 53 QFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAF 131 (538)
Q Consensus 53 ~~pgP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~ 131 (538)
.|--+.|++++||+|++ +|.....+++...... .|... ....+.||+++++.| +++|+|+|+|-..
T Consensus 30 ~F~P~~i~V~~G~tV~~--~N~d~~~H~v~~~~~~-------~~~~~~~s~~l~~g~~~~~tf---~~~G~y~~~C~~H- 96 (106)
T 1id2_A 30 KYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTPH- 96 (106)
T ss_dssp EESSSEEEECTTCEEEE--EECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSC-
T ss_pred EEeCCEEEECCCCEEEE--EECCCCcEEEEEeCCC-------CCcccccccccCCCCEEEEEe---CCCEEEEEEeCCC-
Confidence 34347999999999765 5876555555544321 11111 223588999999888 3799999999752
Q ss_pred hhhcceeeEEEEe
Q 009283 132 HKAAGGYGGIKIA 144 (538)
Q Consensus 132 q~~~Gl~G~liV~ 144 (538)
. ||.|.|+|+
T Consensus 97 -~--~M~G~I~V~ 106 (106)
T 1id2_A 97 -P--FMRGKVIVE 106 (106)
T ss_dssp -T--TCEEEEEEC
T ss_pred -C--CCEEEEEEC
Confidence 2 999999984
No 108
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.17 E-value=2.4e-06 Score=69.79 Aligned_cols=83 Identities=13% Similarity=0.027 Sum_probs=58.6
Q ss_pred eEEEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEccCcc
Q 009283 409 TSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVG 488 (538)
Q Consensus 409 ~~~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG 488 (538)
...++++.|++|.| .|.+...|.++++...+- .+ .+. ... ...++.+.+.||+...+.| +.||
T Consensus 16 P~~i~v~~G~tV~~--~n~~~~~H~v~~~~~~~p-----~~-~~~-----~~~--~~~~~~~~~~~G~~~~~tf--~~~G 78 (99)
T 1plc_A 16 PSEFSISPGEKIVF--KNNAGFPHNIVFDEDSIP-----SG-VDA-----SKI--SMSEEDLLNAKGETFEVAL--SNKG 78 (99)
T ss_dssp SSEEEECTTCEEEE--EECSSCCBCCEECTTSSC-----TT-CCH-----HHH--CCCTTCCBCSTTCEEEEEC--CSCE
T ss_pred CCEEEECCCCEEEE--EECCCCceEEEEeCCCCc-----cc-ccc-----ccc--ccccCccccCCCCEEEEEE--CCCc
Confidence 34578899999887 677777899999865330 00 000 000 0113556788999887765 6899
Q ss_pred eeeeeecchhhhhcceEEEEEE
Q 009283 489 MWNIRSENWARQYLGQQFYLRV 510 (538)
Q Consensus 489 ~w~~HCHil~H~d~GMm~~~~V 510 (538)
.|.|||+ .|...||.+.+.|
T Consensus 79 ~y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1plc_A 79 EYSFYCS--PHQGAGMVGKVTV 98 (99)
T ss_dssp EEEEECG--GGTTTTCEEEEEE
T ss_pred eEEEEcC--CCcccCCEEEEEE
Confidence 9999999 5999999999987
No 109
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.13 E-value=3.9e-06 Score=74.90 Aligned_cols=92 Identities=15% Similarity=0.094 Sum_probs=60.9
Q ss_pred cCcCceEEE-ecCCEEEEEEEeCCCCC-----ceeee--ccc---------cCCC---CCCCCCCCC-CCCCCCCCCeEE
Q 009283 53 QFPGPSIEA-VTNDNLIISVFNALDEP-----FLISW--NGV---------QQRR---NSWQDGVYG-TNCPIPPGKNFT 111 (538)
Q Consensus 53 ~~pgP~i~v-~~Gd~v~v~~~N~l~~~-----~siH~--HG~---------~~~~---~~~~DG~~~-tq~~i~pG~~~~ 111 (538)
+|--..|.| +.||+|+|+|+|....+ +++-+ +|. .... .+..|..-. ....|.||++++
T Consensus 54 ~F~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~s 133 (167)
T 3ay2_A 54 QFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESS 133 (167)
T ss_dssp CBSCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred eEecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEE
Confidence 454458999 99999999999996543 33221 221 0000 000111111 123589999999
Q ss_pred EEEEec-CCccceeeecCchhhhhcceeeEEEEec
Q 009283 112 YVLQVK-DQIGSYFYFPSLAFHKAAGGYGGIKIAS 145 (538)
Q Consensus 112 Y~f~~~-~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 145 (538)
+.|+++ -++|+|||+|-...|.. ||.|-|+|.+
T Consensus 134 vtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~~ 167 (167)
T 3ay2_A 134 LTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLVD 167 (167)
T ss_dssp EEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEEC
T ss_pred EEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEeC
Confidence 999974 16999999998777776 8999999963
No 110
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=98.08 E-value=1e-05 Score=84.68 Aligned_cols=92 Identities=14% Similarity=0.148 Sum_probs=63.5
Q ss_pred eEEEEEcCcCcCceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCCCCCCCCCCCeEEEEEEecCCcccee
Q 009283 45 QQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYF 124 (538)
Q Consensus 45 ~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~tq~~i~pG~~~~Y~f~~~~~~Gt~w 124 (538)
..+...+-.|-.+.|+|++||+|++.++|.....-.+ ||..+.. -|+ ...+.||++.++.|++ +++|+||
T Consensus 546 V~Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDVi--HSF~IPs----lGI---K~DaiPGrtnsvtFta-dkPGvY~ 615 (638)
T 3sbq_A 546 VYMTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVS--HGFVVVN----HGV---SMEISPQQTSSITFVA-DKPGLHW 615 (638)
T ss_dssp EEEEEETTEESCCEEEEETTCEEEEEEEECCCSTTCC--EEEEETT----TTE---EEEECTTCEEEEEEEC-CSCEEEE
T ss_pred EEEEEEcccccCCEEEEecCceeEEEEecCCcCCCce--eeeEecC----CCc---eeeeCCCCeEEEEEEc-CCCEEEE
Confidence 3445555566667999999999999999973211122 3332211 111 1348999999999999 5899999
Q ss_pred eecCch-hhhhcceeeEEEEecC
Q 009283 125 YFPSLA-FHKAAGGYGGIKIASR 146 (538)
Q Consensus 125 YH~H~~-~q~~~Gl~G~liV~~~ 146 (538)
|+|..- .....+|.|.|+|+++
T Consensus 616 y~CSE~CGa~Hs~M~G~ViVEPa 638 (638)
T 3sbq_A 616 YYCSWFCHALHMEMVGRMMVEPA 638 (638)
T ss_dssp EECCSCCSTTCTTCEEEEEEECC
T ss_pred EECCCcCCCCcccceEEEEEecC
Confidence 999842 2223579999999863
No 111
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=98.00 E-value=3e-05 Score=66.18 Aligned_cols=91 Identities=13% Similarity=0.102 Sum_probs=59.3
Q ss_pred cCcCceEEE-ecCCEEEEEEEeCCCCC-----ceeee--cccc-------CCCCCCCCCCC------C-CCCCCCCCCeE
Q 009283 53 QFPGPSIEA-VTNDNLIISVFNALDEP-----FLISW--NGVQ-------QRRNSWQDGVY------G-TNCPIPPGKNF 110 (538)
Q Consensus 53 ~~pgP~i~v-~~Gd~v~v~~~N~l~~~-----~siH~--HG~~-------~~~~~~~DG~~------~-tq~~i~pG~~~ 110 (538)
+|--..|.| ++||+|+|+++|....+ +++-+ .|.. +.....+|=++ . ....|.||++.
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (128)
T 1nwp_A 14 SFNTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEE
Confidence 343358999 99999999999996543 44332 2110 00000111111 1 12348999999
Q ss_pred EEEEEecC-Cccc-eeeecCchhhhhcceeeEEEEe
Q 009283 111 TYVLQVKD-QIGS-YFYFPSLAFHKAAGGYGGIKIA 144 (538)
Q Consensus 111 ~Y~f~~~~-~~Gt-~wYH~H~~~q~~~Gl~G~liV~ 144 (538)
++.|+++. ++|+ |||.|....|.. ||.|.|+|.
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 94 SVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp EEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred EEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 99999841 4776 999998777777 899999984
No 112
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=97.98 E-value=3.5e-05 Score=65.80 Aligned_cols=92 Identities=21% Similarity=0.151 Sum_probs=60.1
Q ss_pred cCcCceEEE-ecCCEEEEEEEeCCCCC-----ceeeecc-----------ccC----CCCCCCCCCCC-CCCCCCCCCeE
Q 009283 53 QFPGPSIEA-VTNDNLIISVFNALDEP-----FLISWNG-----------VQQ----RRNSWQDGVYG-TNCPIPPGKNF 110 (538)
Q Consensus 53 ~~pgP~i~v-~~Gd~v~v~~~N~l~~~-----~siH~HG-----------~~~----~~~~~~DG~~~-tq~~i~pG~~~ 110 (538)
+|--..|.| +.|++|+|+++|....+ +++-+=. +.. .-.+..|..-. ....|.||+++
T Consensus 13 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~ 92 (128)
T 2iaa_C 13 QFNTKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETD 92 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred eEecCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEE
Confidence 343458999 99999999999996543 4432211 100 00001111101 12358999999
Q ss_pred EEEEEec-CCccc-eeeecCchhhhhcceeeEEEEec
Q 009283 111 TYVLQVK-DQIGS-YFYFPSLAFHKAAGGYGGIKIAS 145 (538)
Q Consensus 111 ~Y~f~~~-~~~Gt-~wYH~H~~~q~~~Gl~G~liV~~ 145 (538)
++.|+++ =++|+ |+|.|....|.. ||.|.|+|.+
T Consensus 93 ~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~~ 128 (128)
T 2iaa_C 93 SVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELGS 128 (128)
T ss_dssp EEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEECC
T ss_pred EEEEeccccCCCceEEEEECCCChhH-CCEEEEEEeC
Confidence 9999984 15885 999998777777 8999999963
No 113
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=97.98 E-value=1.3e-05 Score=68.58 Aligned_cols=91 Identities=16% Similarity=0.084 Sum_probs=58.8
Q ss_pred CcCceEEE-ecCCEEEEEEEeCCCCC-----ceeee--ccc---------cC----CCCCCCCCCCC-CCCCCCCCCeEE
Q 009283 54 FPGPSIEA-VTNDNLIISVFNALDEP-----FLISW--NGV---------QQ----RRNSWQDGVYG-TNCPIPPGKNFT 111 (538)
Q Consensus 54 ~pgP~i~v-~~Gd~v~v~~~N~l~~~-----~siH~--HG~---------~~----~~~~~~DG~~~-tq~~i~pG~~~~ 111 (538)
|--..|.| ++||+|+|+|+|....+ +++-+ +|. .. .-.+..|..-. ....|.||++.+
T Consensus 15 F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~s 94 (129)
T 2ccw_A 15 YNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDS 94 (129)
T ss_dssp BSCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred EecceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEEE
Confidence 43358999 99999999999996543 33222 220 00 00001111101 123589999999
Q ss_pred EEEEec-CCccc-eeeecCchhhhhcceeeEEEEec
Q 009283 112 YVLQVK-DQIGS-YFYFPSLAFHKAAGGYGGIKIAS 145 (538)
Q Consensus 112 Y~f~~~-~~~Gt-~wYH~H~~~q~~~Gl~G~liV~~ 145 (538)
+.|+++ -++|+ |||.|....|.. ||.|.|+|.+
T Consensus 95 vtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~~ 129 (129)
T 2ccw_A 95 VTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLGS 129 (129)
T ss_dssp EEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEECC
T ss_pred EEEeccccCCCceEEEEeCCCChhH-cCEEEEEEeC
Confidence 999984 04665 999998777776 8999999963
No 114
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=97.98 E-value=1.4e-05 Score=70.88 Aligned_cols=87 Identities=13% Similarity=0.026 Sum_probs=59.3
Q ss_pred EEEEccCCcEEEEEEEcCC-CCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCce---eeEEeCCCC--EEEEEEE
Q 009283 410 SVMAADFRGFAEVVFENPE-DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISR---CTVQVYPKS--WTAVYVP 483 (538)
Q Consensus 410 ~~~~~~~g~~v~~~l~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~r---DTv~vp~~g--~~~irf~ 483 (538)
+.++++.|++|.+++.|.+ ...|-|-++. .+. .+... + ...+... -+..|.||+ ...+.|+
T Consensus 61 p~i~V~~GD~V~~~~tN~~~~~~H~~~i~~-------~~~-~~~~~-~----~~~~~~~~~~~~~~i~PG~sgt~t~tft 127 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTNKGFGHSFDITK-------KGP-PYAVM-P----VIDPIVAGTGFSPVPKDGKFGYTDFTWH 127 (154)
T ss_dssp CEEEECTTCEEEEEEEECCTTCCCCCEEES-------CCS-CCCSS-C----CCCSEEEEBCCCCCCBTTBEEEEEEEEC
T ss_pred CEEEEeCCCEEEEEEEcCCCCeeeEEEEee-------cCc-chhcc-c----cccccccccccccccCCCCceEEEEEEE
Confidence 3578999999999999974 4456555442 111 11100 0 0000000 112567899 9999999
Q ss_pred ccCcceeeeeecchhhhhcceEEEEEE
Q 009283 484 LDNVGMWNIRSENWARQYLGQQFYLRV 510 (538)
Q Consensus 484 adnpG~w~~HCHil~H~d~GMm~~~~V 510 (538)
+ .||.|.||||+--|...||-..+.|
T Consensus 128 ~-~pGtY~y~C~~~gH~~~GM~G~IiV 153 (154)
T 2cal_A 128 P-TAGTYYYVCQIPGMAATGMFGKIVV 153 (154)
T ss_dssp C-CSEEEEEECCSTTTGGGTCEEEEEE
T ss_pred E-CCceEEEECCCCCHHHCCCEEEEEE
Confidence 9 9999999999999999999999887
No 115
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=97.97 E-value=1.6e-05 Score=67.45 Aligned_cols=73 Identities=11% Similarity=0.047 Sum_probs=48.5
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCCCCCCCCCCCeEEEEEEecCCccceeeecCchhhhhcc
Q 009283 57 PSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAG 136 (538)
Q Consensus 57 P~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~G 136 (538)
+.|++++||+|.+ +|... .++++...- ..-+|. ....+.||++++|.| +++|+|||+|... . .
T Consensus 21 ~~i~V~~GdtV~f--~n~d~-~H~v~~~~~-----~~p~~~--~~~~~~~g~t~~~tF---~~~G~y~y~C~~H--~--~ 83 (122)
T 2ux6_A 21 ASLKVAPGDTVTF--IPTDK-GHNVETIKG-----MIPDGA--EAFKSKINENYKVTF---TAPGVYGVKCTPH--P--F 83 (122)
T ss_dssp SEEEECTTEEEEE--EESSS-SCCCEECTT-----CSCTTC--CCCBCCTTCCEEEEE---CSCEEEEEEETTE--E--E
T ss_pred CEEEECCCCEEEE--EECCC-CcEEEEccc-----ccCCCc--ceeecCCCCEEEEEe---CCCEEEEEEeCCC--c--c
Confidence 7899999998655 56533 444443321 011221 123467999988888 3799999999753 2 2
Q ss_pred eeeEEEEecC
Q 009283 137 GYGGIKIASR 146 (538)
Q Consensus 137 l~G~liV~~~ 146 (538)
|.|.|+|.+.
T Consensus 84 M~G~I~V~~~ 93 (122)
T 2ux6_A 84 MVGVVQVGDA 93 (122)
T ss_dssp EEEEEEESSS
T ss_pred CEEEEEEeCC
Confidence 9999999873
No 116
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.94 E-value=1.8e-05 Score=65.35 Aligned_cols=71 Identities=10% Similarity=-0.004 Sum_probs=50.7
Q ss_pred EEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEccCccee
Q 009283 411 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 490 (538)
Q Consensus 411 ~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 490 (538)
.++++.|++|+|+ |.+...|.+|+|... .|. +.+ +.-.+.||+...+.| +.||.|
T Consensus 34 ~i~v~~Gd~V~~~--N~d~~~H~v~~~~~~-------~g~-------------~~~-~~~~~~pG~~~~~tf--~~~G~y 88 (105)
T 2ov0_A 34 ELHVKVGDTVTWI--NREAMPHNVHFVAGV-------LGE-------------AAL-KGPMMKKEQAYSLTF--TEAGTY 88 (105)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTT-------SSS-------------SCE-ECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCCEEEEEcCCC-------CCc-------------ccc-cccccCCCCEEEEEe--CCCEEE
Confidence 4678899999885 777778999988521 111 001 222367888776665 899999
Q ss_pred eeeecchhhhhcceEEEEEE
Q 009283 491 NIRSENWARQYLGQQFYLRV 510 (538)
Q Consensus 491 ~~HCHil~H~d~GMm~~~~V 510 (538)
.|||++ |. ||.+.+.|
T Consensus 89 ~y~C~~--H~--gM~G~i~V 104 (105)
T 2ov0_A 89 DYHCTP--HP--FMRGKVVV 104 (105)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--CC--CCEEEEEE
Confidence 999998 65 99998877
No 117
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.87 E-value=3.1e-05 Score=82.68 Aligned_cols=75 Identities=9% Similarity=0.052 Sum_probs=60.5
Q ss_pred EEEEccCCcEEEEEEEcCCC---CCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEccC
Q 009283 410 SVMAADFRGFAEVVFENPED---TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDN 486 (538)
Q Consensus 410 ~~~~~~~g~~v~~~l~N~~~---~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adn 486 (538)
..+.++.|+.|+|.+.|.+. ..|.|+++++.+. ..+.||+...++|+++.
T Consensus 513 p~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~---------------------------~~i~PG~t~t~~Fta~~ 565 (595)
T 1fwx_A 513 ESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA---------------------------MEIGPQMTSSVTFVAAN 565 (595)
T ss_dssp SEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEECCS
T ss_pred CEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc---------------------------eeeCCCCeEEEEEECCC
Confidence 45778999999999999643 3688888764321 45778999999999999
Q ss_pred cceeeeeecc---hhhhhcceEEEEEEecC
Q 009283 487 VGMWNIRSEN---WARQYLGQQFYLRVYSS 513 (538)
Q Consensus 487 pG~w~~HCHi---l~H~d~GMm~~~~V~~p 513 (538)
||.|.||||. ..|. ||...+.|.++
T Consensus 566 pGtY~yhC~e~Cg~~H~--gM~G~IiV~p~ 593 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALHM--EMRGRMLVEPK 593 (595)
T ss_dssp CEEEEEECCSCCSTTCT--TCEEEEEEECC
T ss_pred CEEEEEECCCCCCCCcc--CCEEEEEEEcC
Confidence 9999999993 4564 99999999765
No 118
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=97.49 E-value=0.00016 Score=61.15 Aligned_cols=77 Identities=9% Similarity=0.094 Sum_probs=52.9
Q ss_pred EEEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEccCcce
Q 009283 410 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 489 (538)
Q Consensus 410 ~~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~ 489 (538)
..++++.|++|+|+..+ ..|-+..+.. .+... .+.+.+.+++...+.| +.||.
T Consensus 22 ~~i~V~~GDTV~f~n~~---~~Hnv~~~~~----------~~p~g------------~~~~~~~pg~t~s~TF--~~~G~ 74 (124)
T 3ef4_A 22 GFVKVEAGDTVKFVPTD---KSHNAESVRE----------VWPEG------------VAPVKGGFSKEVVFNA--EKEGL 74 (124)
T ss_dssp SEEEECTTCEEEEECSS---SSCCCEECTT----------TSCTT------------SCCCBCCTTCCEEEEC--CSSEE
T ss_pred CEEEECCCCEEEEEECC---CCccEEEeCC----------cCCCC------------ccccccCCCCEEEEEe--CCCeE
Confidence 45788999999998654 4666655421 11100 0122345777666655 89999
Q ss_pred eeeeecchhhhhcceEEEEEEecCCC
Q 009283 490 WNIRSENWARQYLGQQFYLRVYSSAN 515 (538)
Q Consensus 490 w~~HCHil~H~d~GMm~~~~V~~p~~ 515 (538)
|.|||- .|...||.+.+.|.+|.+
T Consensus 75 y~Y~C~--~H~~~GM~G~I~V~~p~~ 98 (124)
T 3ef4_A 75 YVLKCA--PHYGMGMVVLVQVGKPVN 98 (124)
T ss_dssp EEEECT--TTGGGTCEEEEEESSCTT
T ss_pred EEEEcC--CCCcCCCEEEEEECCCCC
Confidence 999997 599999999999987643
No 119
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=97.34 E-value=0.00025 Score=60.37 Aligned_cols=76 Identities=12% Similarity=-0.039 Sum_probs=50.8
Q ss_pred EEEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEccCcce
Q 009283 410 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 489 (538)
Q Consensus 410 ~~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~ 489 (538)
..++++.|++|.|++.|. .|-+..+.. .+. +.. +.+.+.|++...+.| +.||.
T Consensus 23 ~~i~V~~GDtVtf~n~~~---~H~v~~~~~----------~~P-~g~-----------~~f~s~pGet~s~TF--~~pG~ 75 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDK---GHNSALMKG----------GAP-EGA-----------ETWKGKINEEITVTL--SKPGV 75 (127)
T ss_dssp SEEEECTTCEEEEECSSS---SCCCEECTT----------CSC-TTC-----------CCCBCCTTCCCEEEC--CSCEE
T ss_pred CEEEECCCCEEEEEECCC---CceEEEccC----------cCC-CCc-----------cceecCCCCEEEEEe--CCCeE
Confidence 457889999999988773 354443311 011 000 112224677655555 89999
Q ss_pred eeeeecchhhhhcceEEEEEEecCC
Q 009283 490 WNIRSENWARQYLGQQFYLRVYSSA 514 (538)
Q Consensus 490 w~~HCHil~H~d~GMm~~~~V~~p~ 514 (538)
|.|||-. |...||.+.+.|.++.
T Consensus 76 y~y~C~~--H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 76 YMYQCAP--HVGMGMIGAIVVGEPA 98 (127)
T ss_dssp EEEECTT--TGGGTCEEEEEESSCT
T ss_pred EEEEeCC--CCcCCcEEEEEECcCC
Confidence 9999995 9999999999998653
No 120
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=97.34 E-value=0.00041 Score=58.73 Aligned_cols=74 Identities=8% Similarity=0.017 Sum_probs=51.2
Q ss_pred EEEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEccCcce
Q 009283 410 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 489 (538)
Q Consensus 410 ~~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~ 489 (538)
..++++.|++|.|++.|. .|-+..+.. .+.. .. +-+.+.|++...+.| +.||.
T Consensus 21 ~~i~V~~GdtV~f~~~~~---~H~v~~~~~----------~~P~-g~-----------~~f~~~pg~t~s~TF--~~pG~ 73 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDK---SHNVEAIKE----------ILPE-GV-----------ESFKSKINESYTLTV--TEPGL 73 (123)
T ss_dssp SEEEECTTEEEEEEESST---TCCCEECTT----------SSCT-TC-----------CCCBCCTTCCEEEEE--CSCEE
T ss_pred CEEEECCCCEEEEEECCC---CceEEEcCC----------cCCC-Cc-----------cceecCCCCEEEEEe--CCCeE
Confidence 357889999999999883 355544311 1110 00 111234677666666 89999
Q ss_pred eeeeecchhhhhcceEEEEEEec
Q 009283 490 WNIRSENWARQYLGQQFYLRVYS 512 (538)
Q Consensus 490 w~~HCHil~H~d~GMm~~~~V~~ 512 (538)
|.|+|- .|...||-+.+.|.+
T Consensus 74 y~y~C~--~H~~~GM~G~I~V~~ 94 (123)
T 3erx_A 74 YGVKCT--PHFGMGMVGLVQVGD 94 (123)
T ss_dssp EEEECG--GGTTTTCEEEEEESS
T ss_pred EEEEeC--CCCcCCcEEEEEECC
Confidence 999999 499999999999986
No 121
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=97.25 E-value=0.0018 Score=54.49 Aligned_cols=87 Identities=15% Similarity=0.156 Sum_probs=55.4
Q ss_pred CcCceEEEec-CCEEEEEEEeCCCCC-----cee--e---------eccccCCC----CCCCCCCCC-CCCCCCCCCeEE
Q 009283 54 FPGPSIEAVT-NDNLIISVFNALDEP-----FLI--S---------WNGVQQRR----NSWQDGVYG-TNCPIPPGKNFT 111 (538)
Q Consensus 54 ~pgP~i~v~~-Gd~v~v~~~N~l~~~-----~si--H---------~HG~~~~~----~~~~DG~~~-tq~~i~pG~~~~ 111 (538)
|--..|.|++ |++|+|+|+|....+ +++ - --|+.... -+..|-.-. ...-|.||++++
T Consensus 15 F~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~ 94 (125)
T 3fsa_A 15 FNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDS 94 (125)
T ss_dssp BSCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEE
T ss_pred EecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEE
Confidence 4446899986 999999999997542 321 1 11221100 001121111 123489999999
Q ss_pred EEEEec--CCccceeeecCchhhhhcceeeEEEEe
Q 009283 112 YVLQVK--DQIGSYFYFPSLAFHKAAGGYGGIKIA 144 (538)
Q Consensus 112 Y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 144 (538)
..|+.+ .++|+|.|-|. .|. ||.|.++|.
T Consensus 95 vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 95 VTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 999985 26999999999 565 899999983
No 122
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.24 E-value=0.00094 Score=54.01 Aligned_cols=80 Identities=15% Similarity=0.081 Sum_probs=54.7
Q ss_pred EEEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEccCcce
Q 009283 410 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 489 (538)
Q Consensus 410 ~~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~ 489 (538)
..++++.|++|.|+ |.+...|-+.+... .+.. .++. ...-.+...+.+|+...+.| +.||.
T Consensus 18 ~~i~v~~GdtV~~~--n~~~~~H~v~~~~~----------~~p~----g~~~-~~~~~~~~~~~~g~~~~~tf--~~~G~ 78 (98)
T 1iuz_A 18 SKISVAAGEAIEFV--NNAGFPHNIVFDED----------AVPA----GVDA-DAISYDDYLNSKGETVVRKL--STPGV 78 (98)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEECTT----------SSCT----TCCH-HHHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCCEEEEEeCC----------CCcc----cccc-ccccccccccCCCCEEEEEc--CCCEE
Confidence 45788999999886 66656776665531 1100 0000 00113456788999887766 79999
Q ss_pred eeeeecchhhhhcceEEEEEE
Q 009283 490 WNIRSENWARQYLGQQFYLRV 510 (538)
Q Consensus 490 w~~HCHil~H~d~GMm~~~~V 510 (538)
|.|+|-+ |...||-+.+.|
T Consensus 79 y~y~C~~--H~~~gM~G~I~V 97 (98)
T 1iuz_A 79 YGVYCEP--HAGAGMKMTITV 97 (98)
T ss_dssp EEEECTT--TGGGTCEEEEEE
T ss_pred EEEEchh--hccCCCEEEEEE
Confidence 9999987 998999999887
No 123
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.21 E-value=0.00077 Score=55.46 Aligned_cols=71 Identities=11% Similarity=-0.072 Sum_probs=49.4
Q ss_pred EEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEccCccee
Q 009283 411 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 490 (538)
Q Consensus 411 ~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 490 (538)
.++++.|++|.|+ |.+...|-+++....- +. .-.++-.+.+|+...+.| +.||.|
T Consensus 35 ~i~V~~G~tV~~~--N~d~~~H~v~~~~~~~-------~~--------------~~~~s~~l~~g~~~~~tf--~~~G~y 89 (106)
T 1id2_A 35 EVTIKAGETVYWV--NGEVMPHNVAFKKGIV-------GE--------------DAFRGEMMTKDQAYAITF--NEAGSY 89 (106)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTTS-------SS--------------SCEECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCcEEEEEeCCCC-------Cc--------------ccccccccCCCCEEEEEe--CCCEEE
Confidence 4678899999887 7776677766543210 00 001333466788777766 799999
Q ss_pred eeeecchhhhhcceEEEEEE
Q 009283 491 NIRSENWARQYLGQQFYLRV 510 (538)
Q Consensus 491 ~~HCHil~H~d~GMm~~~~V 510 (538)
.|+|-+ |. ||.+.+.|
T Consensus 90 ~~~C~~--H~--~M~G~I~V 105 (106)
T 1id2_A 90 DYFCTP--HP--FMRGKVIV 105 (106)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--CC--CCEEEEEE
Confidence 999988 65 99998877
No 124
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.08 E-value=0.0011 Score=56.84 Aligned_cols=71 Identities=11% Similarity=-0.079 Sum_probs=50.4
Q ss_pred EEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEccCccee
Q 009283 411 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 490 (538)
Q Consensus 411 ~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 490 (538)
.++++.|++|+|+ |.+...|-+++.... .+. .. -|+-.+.||+...+.| +.||.|
T Consensus 61 ~i~V~~GdtV~~~--N~d~~~H~v~~~~~~-------~g~-------------~~-~~s~~l~pG~t~~~tF--~~~G~y 115 (132)
T 3c75_A 61 EVTIKAGETVYWV--NGEVMPHNVAFKKGI-------VGE-------------DA-FRGEMMTKDQAYAITF--NEAGSY 115 (132)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTT-------SSS-------------SC-EECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCceEEEEeCCC-------CCc-------------cc-ccccccCCCCEEEEEc--CCCEEE
Confidence 4678999999886 777667877764321 000 01 1333467888877776 789999
Q ss_pred eeeecchhhhhcceEEEEEE
Q 009283 491 NIRSENWARQYLGQQFYLRV 510 (538)
Q Consensus 491 ~~HCHil~H~d~GMm~~~~V 510 (538)
.|||-+ |. ||.+.+.|
T Consensus 116 ~y~C~~--H~--gM~G~I~V 131 (132)
T 3c75_A 116 DYFCTP--HP--FMRGKVIV 131 (132)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--Cc--CCEEEEEE
Confidence 999988 66 99998887
No 125
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.96 E-value=0.0038 Score=53.59 Aligned_cols=73 Identities=18% Similarity=0.285 Sum_probs=53.4
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCCCCCCCCCCCeEEEEEEecCCccceeeecCc--h-hhh
Q 009283 57 PSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSL--A-FHK 133 (538)
Q Consensus 57 P~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~--~-~q~ 133 (538)
..|.+..|++|++.++|. +. .|+..... -|. ...+.||+.-++.|++ +++|+|+|+|.. + .|
T Consensus 60 ~~l~Vp~G~~V~~~vts~-DV-----~Hsf~ip~----~~~---k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H- 124 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSP-DV-----IHGFHVEG----TNI---NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH- 124 (135)
T ss_dssp SSEEEETTSEEEEEEEBS-SS-----CEEEEETT----SSC---EEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTS-
T ss_pred CEEEEcCCCEEEEEEEeC-Cc-----cceEEecC----CCc---eeEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCc-
Confidence 489999999999999997 32 24443321 111 1347899999999998 689999999963 2 33
Q ss_pred hcceeeEEEEec
Q 009283 134 AAGGYGGIKIAS 145 (538)
Q Consensus 134 ~~Gl~G~liV~~ 145 (538)
.+|.|.++|.+
T Consensus 125 -~~M~g~v~V~~ 135 (135)
T 2cua_A 125 -QNMFGTIVVKE 135 (135)
T ss_dssp -TTCEEEEEEEC
T ss_pred -CCCEEEEEEEC
Confidence 58999998863
No 126
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=96.80 E-value=0.0033 Score=53.09 Aligned_cols=74 Identities=8% Similarity=-0.003 Sum_probs=47.9
Q ss_pred EEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEccCccee
Q 009283 411 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 490 (538)
Q Consensus 411 ~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 490 (538)
.++++.|++|.|+..+. .|-+.++ . +.. ++... .+.+.+|+...+ +++.||.|
T Consensus 22 ~i~V~~GdtV~f~~~~~---~H~v~~~-------~---~~~-p~~~~-----------~~~~~pG~t~~~--tF~~~G~y 74 (123)
T 1paz_A 22 YIKANPGDTVTFIPVDK---GHNVESI-------K---DMI-PEGAE-----------KFKSKINENYVL--TVTQPGAY 74 (123)
T ss_dssp EEEECTTCEEEEEESSS---SCCCEEC-------T---TCS-CTTCC-----------CCBCCTTCCEEE--ECCSCEEE
T ss_pred EEEECCCCEEEEEECCC---CeEEEEe-------c---ccC-CCCcc-----------ceecCCCCEEEE--EeCCCEEE
Confidence 46789999998876653 3544443 1 100 00000 112346776554 45889999
Q ss_pred eeeecchhhhhcceEEEEEEecC
Q 009283 491 NIRSENWARQYLGQQFYLRVYSS 513 (538)
Q Consensus 491 ~~HCHil~H~d~GMm~~~~V~~p 513 (538)
.|+|-. |...||-+.+.|.++
T Consensus 75 ~y~C~~--H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 75 LVKCTP--HYAMGMIALIAVGDS 95 (123)
T ss_dssp EEECTT--TGGGTCEEEEEESSS
T ss_pred EEEeCC--cccCCCEEEEEEcCC
Confidence 999985 999999999999863
No 127
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=96.66 E-value=0.0088 Score=53.17 Aligned_cols=83 Identities=14% Similarity=0.195 Sum_probs=58.2
Q ss_pred EEcCcCcCceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCCCCCCCCCCCeEEEEEEecCCccceeeecC
Q 009283 49 LINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPS 128 (538)
Q Consensus 49 ~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H 128 (538)
..+-++--..|.+..|++|++.++|. +-. |+...+. . |. +..+.||+.-++.|++ +++|+|++.|.
T Consensus 85 a~~~~f~Pn~l~VP~G~~Vr~~vTS~-DVi-----Hsf~IP~---l-gi---k~da~PG~~n~~~~~~-~kpG~y~g~Cs 150 (168)
T 3s8f_B 85 AFAFGYQPNPIEVPQGAEIVFKITSP-DVI-----HGFHVEG---T-NI---NVEVLPGEVSTVRYTF-KRPGEYRIICN 150 (168)
T ss_dssp EETTEEESSSEEEETTSEEEEEEECS-SSC-----EEEEETT---S-SC---EEEECTTBCEEEEEEC-CSCEEEEEECC
T ss_pred EEeceEecCEEEEeCCCeEEEEEecC-Cce-----EEEEECC---C-Ce---EEEecCCceeEEEEEe-CCCEEEEEECC
Confidence 33334433689999999999999997 333 3433221 1 11 1336799999999998 68999999998
Q ss_pred c-hhhhhcceeeEEEEec
Q 009283 129 L-AFHKAAGGYGGIKIAS 145 (538)
Q Consensus 129 ~-~~q~~~Gl~G~liV~~ 145 (538)
. -.....+|.|-++|++
T Consensus 151 e~CG~~Hs~M~g~V~V~e 168 (168)
T 3s8f_B 151 QYCGLGHQNMFGTIVVKE 168 (168)
T ss_dssp SCCSTTGGGCEEEEEEEC
T ss_pred cCCCCCcCCCEEEEEEeC
Confidence 3 3344568999999873
No 128
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=96.55 E-value=0.0045 Score=52.26 Aligned_cols=38 Identities=13% Similarity=0.155 Sum_probs=30.7
Q ss_pred eCCCCEEEEEEEccCcceeeeeecchhhhhcceEEEEEEecC
Q 009283 472 VYPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSS 513 (538)
Q Consensus 472 vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~p 513 (538)
+.+|+...+. ++.||.|.|+|-. |...||.+.+.|.++
T Consensus 58 ~~pG~t~~~t--F~~~G~y~y~C~~--H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 58 TTVGQEAVVK--FDKEGVYGFKCAP--HYMMGMVALVVVGDK 95 (123)
T ss_dssp CCTTSCEEEE--CCSCEEEEEECST--TTTTTCEEEEEESSC
T ss_pred cCCCCEEEEE--eCCCeEEEEEeCC--ccccCCEEEEEEcCC
Confidence 3577765554 4789999999985 999999999999863
No 129
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.45 E-value=0.0072 Score=63.50 Aligned_cols=75 Identities=11% Similarity=0.122 Sum_probs=58.6
Q ss_pred EEEEccCCcEEEEEEEcCC---CCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEccC
Q 009283 410 SVMAADFRGFAEVVFENPE---DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDN 486 (538)
Q Consensus 410 ~~~~~~~g~~v~~~l~N~~---~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adn 486 (538)
..+.++.|+.|+|+++|.+ +..|-|.+.+... -+.+.||....+.|+++.
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGI---------------------------K~DaiPGrtnsvtFtadk 610 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGV---------------------------SMEISPQQTSSITFVADK 610 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE---------------------------EEEECTTCEEEEEEECCS
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecCCCc---------------------------eeeeCCCCeEEEEEEcCC
Confidence 4577899999999999974 4567776654321 125668999999999999
Q ss_pred cceeeeeecchhhh-hcceEEEEEEe
Q 009283 487 VGMWNIRSENWARQ-YLGQQFYLRVY 511 (538)
Q Consensus 487 pG~w~~HCHil~H~-d~GMm~~~~V~ 511 (538)
||.|.+||...-|. |.+|.+.+.|.
T Consensus 611 PGvY~y~CSE~CGa~Hs~M~G~ViVE 636 (638)
T 3sbq_A 611 PGLHWYYCSWFCHALHMEMVGRMMVE 636 (638)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEE
T ss_pred CEEEEEECCCcCCCCcccceEEEEEe
Confidence 99999999976664 56888888775
No 130
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=96.33 E-value=0.012 Score=52.37 Aligned_cols=91 Identities=7% Similarity=0.000 Sum_probs=61.2
Q ss_pred EEEc-cCCcEEEEEEEcCCCCCC-CccccCCCceEEeecC-----------C--CCCCCCCCCcCCCCCCceeeEEeCCC
Q 009283 411 VMAA-DFRGFAEVVFENPEDTLQ-SWHIDGHNFFAVGMDG-----------G--EWTPASRLTYNLRDTISRCTVQVYPK 475 (538)
Q Consensus 411 ~~~~-~~g~~v~~~l~N~~~~~H-P~HlHG~~F~Vl~~~~-----------g--~~~~~~~~~~~~~~p~~rDTv~vp~~ 475 (538)
.+++ +.|+.|.|+|.|.+.... -| +|.|-+...+. + .+-+.. .......+..|.||
T Consensus 59 ~itV~kaG~~Vtv~~~N~g~~p~~~m---~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~------d~~vl~~t~~l~pG 129 (167)
T 3ay2_A 59 DIQVSKACKEFTITLKHTGTQPKASM---GHNLVIAKAEDMDGVFKDGVGAADTDYVKPD------DARVVAHTKLIGGG 129 (167)
T ss_dssp EEEEETTCSSEEEEEEECSCSCHHHH---CBCCEEEEGGGHHHHHHHHGGGGGGTTSCTT------CTTEEEECCCBCTT
T ss_pred eEEEecCCCEEEEEEEECCCCccccc---cceEEeccCcchhhhHHHhhhcccccccccc------ccchhccceeeCCC
Confidence 3678 899999999999985420 00 12333332210 0 000000 01134556778999
Q ss_pred CEEEEEEEcc--CcceeeeeecchhhhhcceEEEEEEe
Q 009283 476 SWTAVYVPLD--NVGMWNIRSENWARQYLGQQFYLRVY 511 (538)
Q Consensus 476 g~~~irf~ad--npG~w~~HCHil~H~d~GMm~~~~V~ 511 (538)
+...|.|.++ .||.|-|+|-+--|.. ||-+.+.|.
T Consensus 130 et~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 130 EESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp CEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred CEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 9999999987 8999999999988888 899999885
No 131
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=96.07 E-value=0.016 Score=48.82 Aligned_cols=71 Identities=6% Similarity=-0.023 Sum_probs=45.7
Q ss_pred EEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEccCccee
Q 009283 411 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 490 (538)
Q Consensus 411 ~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 490 (538)
.++++.|++|.|+.. +. .|-++++. +.+... . ..+.+.+++...+.| +.||.|
T Consensus 22 ~i~V~~GdtV~f~n~--d~-~H~v~~~~----------~~~p~~-~-----------~~~~~~~g~t~~~tF--~~~G~y 74 (122)
T 2ux6_A 22 SLKVAPGDTVTFIPT--DK-GHNVETIK----------GMIPDG-A-----------EAFKSKINENYKVTF--TAPGVY 74 (122)
T ss_dssp EEEECTTEEEEEEES--SS-SCCCEECT----------TCSCTT-C-----------CCCBCCTTCCEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEEEC--CC-CcEEEEcc----------cccCCC-c-----------ceeecCCCCEEEEEe--CCCEEE
Confidence 467899999988744 32 45555543 111110 0 011234677766665 899999
Q ss_pred eeeecchhhhhcceEEEEEEec
Q 009283 491 NIRSENWARQYLGQQFYLRVYS 512 (538)
Q Consensus 491 ~~HCHil~H~d~GMm~~~~V~~ 512 (538)
.|+|-+ |.. |.+.+.|.+
T Consensus 75 ~y~C~~--H~~--M~G~I~V~~ 92 (122)
T 2ux6_A 75 GVKCTP--HPF--MVGVVQVGD 92 (122)
T ss_dssp EEEETT--EEE--EEEEEEESS
T ss_pred EEEeCC--Ccc--CEEEEEEeC
Confidence 999987 665 999999976
No 132
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=95.82 E-value=0.026 Score=47.90 Aligned_cols=93 Identities=12% Similarity=0.007 Sum_probs=61.5
Q ss_pred EEEEccCC-cEEEEEEEcCCCCCCCccccCCCceEEeecC-----------C---CCCCCCCCCcCCCCCCceeeEEeCC
Q 009283 410 SVMAADFR-GFAEVVFENPEDTLQSWHIDGHNFFAVGMDG-----------G---EWTPASRLTYNLRDTISRCTVQVYP 474 (538)
Q Consensus 410 ~~~~~~~g-~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~-----------g---~~~~~~~~~~~~~~p~~rDTv~vp~ 474 (538)
..++++.| +.|.+++.|.+... -=-=+|.|-+...+. + .+-+.. ..-....+..|.|
T Consensus 18 ~~i~V~~G~~~vtv~~~N~g~~~--~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~------~~~~~~~t~~l~p 89 (129)
T 1cuo_A 18 RSISVPASCAEFTVNFEHKGHMP--KTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPG------DKRVIAFTPIIGG 89 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSSSC--HHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTT------CTTCSEECCCBCT
T ss_pred CeEEEcCCCeEEEEEEEECCCCc--ccccccceEEecCcchhhhHHHhhhccccccccccc------cccceeeeeEECC
Confidence 34788999 99999999987542 000023343333220 0 010000 0012345667889
Q ss_pred CCEEEEEEEcc---CcceeeeeecchhhhhcceEEEEEEe
Q 009283 475 KSWTAVYVPLD---NVGMWNIRSENWARQYLGQQFYLRVY 511 (538)
Q Consensus 475 ~g~~~irf~ad---npG~w~~HCHil~H~d~GMm~~~~V~ 511 (538)
|+...+.|.++ .||.|-|.|-+--|.. ||-+.+.|.
T Consensus 90 Get~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 90 GEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp TCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred CCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 99999999997 8999999999888888 899998885
No 133
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.41 E-value=0.05 Score=46.52 Aligned_cols=70 Identities=14% Similarity=0.184 Sum_probs=51.1
Q ss_pred EEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEccCcceee
Q 009283 412 MAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWN 491 (538)
Q Consensus 412 ~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~ 491 (538)
+.++.|+.|+|.+.|.+ ..|- |.|-+.+ . -+.+.||....+.|.++.||.|.
T Consensus 62 l~Vp~G~~V~~~vts~D-V~Hs-------f~ip~~~------------------~--k~d~~PG~~~~~~~~~~~~G~y~ 113 (135)
T 2cua_A 62 IEVPQGAEIVFKITSPD-VIHG-------FHVEGTN------------------I--NVEVLPGEVSTVRYTFKRPGEYR 113 (135)
T ss_dssp EEEETTSEEEEEEEBSS-SCEE-------EEETTSS------------------C--EEEECBTBCEEEEEECCSCEEEE
T ss_pred EEEcCCCEEEEEEEeCC-ccce-------EEecCCC------------------c--eeEeCCCCcEEEEEEcCCCEEEE
Confidence 56789999999999975 3333 4442111 0 13456788889999999999999
Q ss_pred eeecc---hhhhhcceEEEEEEe
Q 009283 492 IRSEN---WARQYLGQQFYLRVY 511 (538)
Q Consensus 492 ~HCHi---l~H~d~GMm~~~~V~ 511 (538)
++|.. ..| .+|-..+.|.
T Consensus 114 ~~C~e~CG~~H--~~M~g~v~V~ 134 (135)
T 2cua_A 114 IICNQYCGLGH--QNMFGTIVVK 134 (135)
T ss_dssp EECCSCCSTTS--TTCEEEEEEE
T ss_pred EECcccCCCCc--CCCEEEEEEE
Confidence 99976 445 5888888875
No 134
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=95.40 E-value=0.064 Score=45.40 Aligned_cols=91 Identities=5% Similarity=-0.096 Sum_probs=59.9
Q ss_pred EEEc-cCCcEEEEEEEcCCCCC-----CCccccCCCceEEeecCCCCCC--------CCCCCcCC-CC-CCceeeEEeCC
Q 009283 411 VMAA-DFRGFAEVVFENPEDTL-----QSWHIDGHNFFAVGMDGGEWTP--------ASRLTYNL-RD-TISRCTVQVYP 474 (538)
Q Consensus 411 ~~~~-~~g~~v~~~l~N~~~~~-----HP~HlHG~~F~Vl~~~~g~~~~--------~~~~~~~~-~~-p~~rDTv~vp~ 474 (538)
.+++ +.|+.|.+++.|.+... |-|-| ...+ .... .....|-. .+ .....|-.|.|
T Consensus 18 ~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi-------~~~~--~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~p 88 (128)
T 2iaa_C 18 SIVVDKTCKEFTINLKHTGKLPKAAMGHNVVV-------SKKS--DESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGG 88 (128)
T ss_dssp EEEECTTCSEEEEEEEECSCSCHHHHCBCCEE-------EETT--HHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCT
T ss_pred EEEEecCCcEEEEEEEECCCCcccCCCceEEE-------cccc--chhhHHHhhhhccccccccccccchhhccceeeCC
Confidence 4678 78999999999998553 55432 2211 0000 00000000 01 12345667899
Q ss_pred CCEEEEEEEcc--Ccce-eeeeecchhhhhcceEEEEEEe
Q 009283 475 KSWTAVYVPLD--NVGM-WNIRSENWARQYLGQQFYLRVY 511 (538)
Q Consensus 475 ~g~~~irf~ad--npG~-w~~HCHil~H~d~GMm~~~~V~ 511 (538)
|+...+.|.+. .||. |-|.|-+--|.. ||-+.+.|.
T Consensus 89 Ges~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 89 GETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp TCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred CCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 99999999998 8995 999999988888 999999884
No 135
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=94.96 E-value=0.14 Score=43.32 Aligned_cols=96 Identities=9% Similarity=-0.076 Sum_probs=59.8
Q ss_pred EEEc-cCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCC--------CCCCCcCC-CC-CCceeeEEeCCCCEEE
Q 009283 411 VMAA-DFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTP--------ASRLTYNL-RD-TISRCTVQVYPKSWTA 479 (538)
Q Consensus 411 ~~~~-~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~--------~~~~~~~~-~~-p~~rDTv~vp~~g~~~ 479 (538)
.+++ +.|+.|.+++.|.+... -=-=+|.|-+...+. ... .....|-. .+ .....+..|.||+...
T Consensus 19 ~i~V~k~G~~vtv~~~N~g~~p--~~~m~H~~vi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~s 94 (129)
T 2ccw_A 19 EIVVDKSCKQFTMHLKHVGKMA--KVAMGHNLVLTKDAD--KQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDS 94 (129)
T ss_dssp EEEECTTCSEEEEEEEECSCCC--HHHHCBCCEEEEGGG--HHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred eEEEecCCCEEEEEEEECCCcc--cccCcceEEEcCccc--hhhhHHHhhhhcccccccccccccceeeeeEECCCCEEE
Confidence 4678 78999999999998542 000022333332210 000 00000000 01 1233566789999999
Q ss_pred EEEEcc--Ccce-eeeeecchhhhhcceEEEEEEe
Q 009283 480 VYVPLD--NVGM-WNIRSENWARQYLGQQFYLRVY 511 (538)
Q Consensus 480 irf~ad--npG~-w~~HCHil~H~d~GMm~~~~V~ 511 (538)
+.|.++ .||. |-|.|-+--|.. ||-+.+.|.
T Consensus 95 vtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 95 VTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp EEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred EEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 999998 7876 999999988888 899999884
No 136
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=94.67 E-value=0.14 Score=43.24 Aligned_cols=92 Identities=9% Similarity=-0.070 Sum_probs=59.4
Q ss_pred EEEc-cCCcEEEEEEEcCCCCC-----CCccccCCCceEEeecCC------CCCCCCCCCc-CCCC-CCceeeEEeCCCC
Q 009283 411 VMAA-DFRGFAEVVFENPEDTL-----QSWHIDGHNFFAVGMDGG------EWTPASRLTY-NLRD-TISRCTVQVYPKS 476 (538)
Q Consensus 411 ~~~~-~~g~~v~~~l~N~~~~~-----HP~HlHG~~F~Vl~~~~g------~~~~~~~~~~-~~~~-p~~rDTv~vp~~g 476 (538)
.+++ +.|+.|.+++.|.+... |-|-| ...+.- .........| .-.+ .....|-.|.||+
T Consensus 19 ~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi-------~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGe 91 (128)
T 1nwp_A 19 DIAIDKSCKTFTVELTHSGSLPKNVMGHNLVI-------SKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGE 91 (128)
T ss_dssp EEEECTTCSEEEEEEEECSSCCHHHHCBCCEE-------EEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTC
T ss_pred EEEEecCCCEEEEEEEECCCCcccCCCceEEE-------ccccchhhHHHHHhhccccccccccccchhheeeeeeCCCC
Confidence 4788 79999999999988542 55433 221100 0000000000 0001 1234555789999
Q ss_pred EEEEEEEcc--Ccce-eeeeecchhhhhcceEEEEEE
Q 009283 477 WTAVYVPLD--NVGM-WNIRSENWARQYLGQQFYLRV 510 (538)
Q Consensus 477 ~~~irf~ad--npG~-w~~HCHil~H~d~GMm~~~~V 510 (538)
...+.|.+. .||. |-|.|-+--|.. ||-+.+.|
T Consensus 92 t~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V 127 (128)
T 1nwp_A 92 KDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTL 127 (128)
T ss_dssp EEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEE
T ss_pred EEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEE
Confidence 999999997 7887 999999988888 89988876
No 137
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=93.68 E-value=0.25 Score=43.73 Aligned_cols=72 Identities=15% Similarity=0.224 Sum_probs=53.6
Q ss_pred EEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEccCcceee
Q 009283 412 MAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWN 491 (538)
Q Consensus 412 ~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~ 491 (538)
+.++.|+.|++.++|.+ ..|-|-+= +.+ . -+.+.||....+.|.++.||.|.
T Consensus 95 l~VP~G~~Vr~~vTS~D-ViHsf~IP-------~lg-----------------i---k~da~PG~~n~~~~~~~kpG~y~ 146 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSPD-VIHGFHVE-------GTN-----------------I---NVEVLPGEVSTVRYTFKRPGEYR 146 (168)
T ss_dssp EEEETTSEEEEEEECSS-SCEEEEET-------TSS-----------------C---EEEECTTBCEEEEEECCSCEEEE
T ss_pred EEEeCCCeEEEEEecCC-ceEEEEEC-------CCC-----------------e---EEEecCCceeEEEEEeCCCEEEE
Confidence 56789999999999974 44555432 111 1 12345788889999999999999
Q ss_pred eeecc-hhhhhcceEEEEEEe
Q 009283 492 IRSEN-WARQYLGQQFYLRVY 511 (538)
Q Consensus 492 ~HCHi-l~H~d~GMm~~~~V~ 511 (538)
+.|.. --+.+.+|.+.+.|.
T Consensus 147 g~Cse~CG~~Hs~M~g~V~V~ 167 (168)
T 3s8f_B 147 IICNQYCGLGHQNMFGTIVVK 167 (168)
T ss_dssp EECCSCCSTTGGGCEEEEEEE
T ss_pred EECCcCCCCCcCCCEEEEEEe
Confidence 99995 455678999998885
No 138
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=93.07 E-value=0.52 Score=39.39 Aligned_cols=93 Identities=12% Similarity=0.099 Sum_probs=58.9
Q ss_pred EEEEccC-CcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCC---C----C-CCCc-CC-CCCCceeeEEeCCCCEE
Q 009283 410 SVMAADF-RGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTP---A----S-RLTY-NL-RDTISRCTVQVYPKSWT 478 (538)
Q Consensus 410 ~~~~~~~-g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~---~----~-~~~~-~~-~~p~~rDTv~vp~~g~~ 478 (538)
.-++++. |+.|.++|.|.+..+ --.=||.| ||+... .... + . ...| .- .......|..|.||+..
T Consensus 18 ~~i~V~~~Ge~V~~~l~N~G~~p--~~~M~Hn~-Vl~~~~-~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~ 93 (125)
T 3fsa_A 18 NAITVDKSCKQFTVNLSHPGNLP--KNVMGHNW-VLSTAA-DMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (125)
T ss_dssp SEEEECTTCSEEEEEEECCSSCC--HHHHCBCC-EEEEHH-HHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred CEEEEecCCCEEEEEEEECCccc--ccccCceE-EEcccc-hHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEE
Confidence 3477876 999999999998542 11113444 443311 0000 0 0 0011 00 12356678889999999
Q ss_pred EEEEEcc---CcceeeeeecchhhhhcceEEEEEE
Q 009283 479 AVYVPLD---NVGMWNIRSENWARQYLGQQFYLRV 510 (538)
Q Consensus 479 ~irf~ad---npG~w~~HCHil~H~d~GMm~~~~V 510 (538)
.|.|.+. .+|.|-|-|- -|. ||-+.+.|
T Consensus 94 ~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V 124 (125)
T 3fsa_A 94 SVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTL 124 (125)
T ss_dssp EEEEEGGGC---CCEEEECS--SST--TCEEEEEE
T ss_pred EEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEE
Confidence 9999997 8999999999 688 99998876
No 139
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=89.82 E-value=4 Score=33.68 Aligned_cols=71 Identities=15% Similarity=0.363 Sum_probs=51.4
Q ss_pred cCCEE--EEEEEecCCCceEEEEEe-CCee--EEEEEcCeecc--------cceecEEEEcCCCeEEEEEEeCC--CCcc
Q 009283 207 QGKTY--RFRISNVGISTSINFRIQ-GHKM--LLVEVEGTHTL--------QNTYDSLDIHLGQSYSVLVRADQ--PPQG 271 (538)
Q Consensus 207 ~G~~~--rlRliN~~~~~~~~~~l~-gh~~--~via~DG~~~~--------p~~~~~v~l~pgeR~dv~v~~~~--~~g~ 271 (538)
.|+.+ .|.+.|.+.. ...+.+. |+.+ .|...+|..+- ........|.|||...+-.+.++ +||.
T Consensus 16 ~g~~v~~~ltv~N~s~~-~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSER-AIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECSSS-CEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCCCC-cEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 45555 6778999886 5777764 5554 44444577652 23467899999999999999884 5799
Q ss_pred eEEEEEe
Q 009283 272 YYIVIST 278 (538)
Q Consensus 272 y~i~~~~ 278 (538)
|.+.+-.
T Consensus 95 Ytl~a~l 101 (120)
T 3isy_A 95 YEVKVTF 101 (120)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9998754
No 140
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=77.79 E-value=3.2 Score=37.65 Aligned_cols=76 Identities=12% Similarity=0.066 Sum_probs=54.5
Q ss_pred EEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEccCccee
Q 009283 411 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 490 (538)
Q Consensus 411 ~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 490 (538)
.+.++.|+.|++.|++.+ .. |.|+|-+.+. ..| +-||....+.|.++.||.|
T Consensus 42 ~l~lP~g~~V~~~lTS~D-Vi-------HSF~IP~lgv-----------------K~d---aiPGr~n~l~~~~~~pG~y 93 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSNS-VM-------HSFFIPRLGS-----------------QIY---AMAGMQTRLHLIANEPGTY 93 (205)
T ss_dssp EEEEETTSCEEEEEEESS-SC-------EEEEEGGGTE-----------------EEE---ECTTCCEEEEECCSSSEEE
T ss_pred eEEEeCCCEEEEEEecCC-ce-------eeEEecccCc-----------------EEE---ecCCceEEEEEEeCCCeEE
Confidence 467899999999999875 33 3555543321 123 3368888899999999999
Q ss_pred eeeecchhhh-hcceEEEEEEe-cCC
Q 009283 491 NIRSENWARQ-YLGQQFYLRVY-SSA 514 (538)
Q Consensus 491 ~~HCHil~H~-d~GMm~~~~V~-~p~ 514 (538)
...|-.+-.. +..|-..++|+ +++
T Consensus 94 ~g~CsE~CG~~Hs~M~~~v~vv~~~~ 119 (205)
T 1cyx_A 94 DGICAEICGPGHSGMKFKAIATPDRA 119 (205)
T ss_dssp EEEECSCCSTTSTTCCEEEEEESSHH
T ss_pred EEEcccccccchhhceEEEEEECCHH
Confidence 9999876555 45666778777 543
No 141
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=71.17 E-value=8.8 Score=34.79 Aligned_cols=74 Identities=14% Similarity=-0.008 Sum_probs=52.1
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCCCCCCCCCCCeEEEEEEecCCccceeeecCc-hhhhhc
Q 009283 57 PSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSL-AFHKAA 135 (538)
Q Consensus 57 P~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~-~~q~~~ 135 (538)
..|.+..|+.|++.+++. +.- ||..++. . +.+.-+-||..-...|.+ +++|+|+..|.- -...-.
T Consensus 41 n~l~lP~g~~V~~~lTS~-DVi-----HSF~IP~---l----gvK~daiPGr~n~l~~~~-~~pG~y~g~CsE~CG~~Hs 106 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSN-SVM-----HSFFIPR---L----GSQIYAMAGMQTRLHLIA-NEPGTYDGICAEICGPGHS 106 (205)
T ss_dssp SEEEEETTSCEEEEEEES-SSC-----EEEEEGG---G----TEEEEECTTCCEEEEECC-SSSEEEEEEECSCCSTTST
T ss_pred ceEEEeCCCEEEEEEecC-Cce-----eeEEecc---c----CcEEEecCCceEEEEEEe-CCCeEEEEEcccccccchh
Confidence 479999999999999987 222 3443321 0 112346789999999998 689999999982 222234
Q ss_pred ceeeEEEEe
Q 009283 136 GGYGGIKIA 144 (538)
Q Consensus 136 Gl~G~liV~ 144 (538)
.|.+.++|.
T Consensus 107 ~M~~~v~vv 115 (205)
T 1cyx_A 107 GMKFKAIAT 115 (205)
T ss_dssp TCCEEEEEE
T ss_pred hceEEEEEE
Confidence 588888887
No 142
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=64.92 E-value=6 Score=33.01 Aligned_cols=49 Identities=27% Similarity=0.333 Sum_probs=31.0
Q ss_pred EEEEEeCCCCCc---eeeeccccCCCC---CCCCCCCCCCCCCCCCCeEEEEEEe
Q 009283 68 IISVFNALDEPF---LISWNGVQQRRN---SWQDGVYGTNCPIPPGKNFTYVLQV 116 (538)
Q Consensus 68 ~v~~~N~l~~~~---siH~HG~~~~~~---~~~DG~~~tq~~i~pG~~~~Y~f~~ 116 (538)
.|++.|..+.+. +=||.=.+..+. -..+||-|.|.-|.||++|+|.=-.
T Consensus 34 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~YtSg~ 88 (127)
T 2f1e_A 34 SIRIQNAGAVPARLVARHWQITDGNGRTEQVDGEGVVGEQPWLRPGEAFHYTSGV 88 (127)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEESSBTTBCCEECTTCEEEEEEEE
T ss_pred EEEEEeCCCCCEEEEeceEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEeCCc
Confidence 467788766553 347764432211 1257777788889999988886443
No 143
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=64.25 E-value=10 Score=36.65 Aligned_cols=76 Identities=7% Similarity=0.067 Sum_probs=54.6
Q ss_pred EEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEccCccee
Q 009283 411 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 490 (538)
Q Consensus 411 ~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 490 (538)
.+.++.|+.|++.+++.+ ..|- |+|-+.+. ..| +-||....+.|.++.||.|
T Consensus 190 ~lvlP~g~~V~~~ltS~D-ViHs-------f~iP~lg~-----------------k~d---aiPG~~n~~~~~~~~~G~y 241 (298)
T 3hb3_B 190 PVVVPVGKKVLVQVTATD-VIHA-------WTIPAFAV-----------------KQD---AVPGRIAQLWFSVDQEGVY 241 (298)
T ss_dssp CEEEESSSEEEEEEEESS-SCEE-------EEEGGGTE-----------------EEE---ECTTCCEEEEEECSSSEEE
T ss_pred eEEEEcCCEEEEEEEeCC-ccce-------eeEcccCc-----------------eEE---ecCCceEEEEEEeCCCEEE
Confidence 467899999999999875 3344 44422211 123 3467888899999999999
Q ss_pred eeeecchh-hhhcceEEEEEEecCC
Q 009283 491 NIRSENWA-RQYLGQQFYLRVYSSA 514 (538)
Q Consensus 491 ~~HCHil~-H~d~GMm~~~~V~~p~ 514 (538)
...|.-+- .-|..|-..++|++++
T Consensus 242 ~g~CsE~CG~~Hs~M~~~v~vvs~~ 266 (298)
T 3hb3_B 242 FGQCSELCGINHAYMPIVVKAVSQE 266 (298)
T ss_dssp EECCCSCCSTTTTSCCEEEEEECHH
T ss_pred EEEcccccCcCccCCeeEEEEEcHH
Confidence 99999644 3466777888888765
No 144
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=64.12 E-value=59 Score=26.62 Aligned_cols=75 Identities=13% Similarity=0.152 Sum_probs=49.5
Q ss_pred eeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCCCC----CCCCCCCeEEEEEEecC
Q 009283 43 VKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTN----CPIPPGKNFTYVLQVKD 118 (538)
Q Consensus 43 ~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~tq----~~i~pG~~~~Y~f~~~~ 118 (538)
....+-..|-+-=.=+|+...|.+..+.|.+.-. ...| -|+||-..+| ..|.||++.+|+...++
T Consensus 20 v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G---~~Vw--------rwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~ 88 (120)
T 3isy_A 20 IKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEH---KERY--------RYSKEKMFTQAFQNLTLESGETYDFSDVWKE 88 (120)
T ss_dssp EEEEEEEEECSSSCEEEEESSSCCEEEEEECTTC---CEEE--------ETTTTCCCCCCCEEEEECTTCEEEEEEEESS
T ss_pred EEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCC---CEEE--------EccccchhhhhhceEEECCCCEEEEEEEeCC
Confidence 3444445554433347888888888888887522 1222 1467765555 34999999999999973
Q ss_pred --CccceeeecC
Q 009283 119 --QIGSYFYFPS 128 (538)
Q Consensus 119 --~~Gt~wYH~H 128 (538)
.+|+|..+.-
T Consensus 89 ~~~pG~Ytl~a~ 100 (120)
T 3isy_A 89 VPEPGTYEVKVT 100 (120)
T ss_dssp CCCSEEEEEEEE
T ss_pred CCCCccEEEEEE
Confidence 4899987753
No 145
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=63.40 E-value=16 Score=35.81 Aligned_cols=69 Identities=16% Similarity=0.280 Sum_probs=39.6
Q ss_pred eeEEEEEcCcCcCceEEEecCCEEEEEEEeCCCCCce--------eeeccccCC--CCCCCC------CCCC-CCCCCCC
Q 009283 44 KQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFL--------ISWNGVQQR--RNSWQD------GVYG-TNCPIPP 106 (538)
Q Consensus 44 ~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~~~~s--------iH~HG~~~~--~~~~~D------G~~~-tq~~i~p 106 (538)
..++..-+=+.||-++++ .++|+|+.+.+.. ++|=.-.+. .+.+-| |... ...||.|
T Consensus 251 ~~~v~~A~Y~vpgR~l~~------~~~VtN~g~~pvrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~gL~vsd~~pI~P 324 (382)
T 1yew_A 251 SVKVEDATYRVPGRAMRM------KLTITNHGNSPIRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGLSVSDNSPLAP 324 (382)
T ss_dssp EEEEEEEEEESSCSEEEE------EEEEEECSSSCEEEEEEECSSCEEECTTTCCCCSCCCGGGEETTCEEESCCSCBCT
T ss_pred EEEeeccEEecCCcEEEE------EEEEEcCCCCceEeeeEEeccEEEeCCcccccCCCChHHhhccCCceeCCCCCcCC
Confidence 344433333478888764 5888998875543 344332111 011111 2222 3478999
Q ss_pred CCeEEEEEEecC
Q 009283 107 GKNFTYVLQVKD 118 (538)
Q Consensus 107 G~~~~Y~f~~~~ 118 (538)
||+.+.+.++.|
T Consensus 325 GETr~~~v~a~d 336 (382)
T 1yew_A 325 GETRTVDVTASD 336 (382)
T ss_dssp TCEEEEEEEEEC
T ss_pred CceeEEEEEeeh
Confidence 999999999853
No 146
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=62.78 E-value=10 Score=35.82 Aligned_cols=76 Identities=8% Similarity=0.093 Sum_probs=54.7
Q ss_pred EEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEccCccee
Q 009283 411 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 490 (538)
Q Consensus 411 ~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 490 (538)
.+.++.|+.|++.+++.+ ..| .|+|-+.+. ..| +-||....+.|.++.||.|
T Consensus 172 ~l~lP~g~~v~~~~tS~D-ViH-------sf~ip~l~~-----------------k~d---a~PG~~n~~~~~~~~~G~y 223 (262)
T 2gsm_B 172 AMVVPVNKTVVVQVTGAD-VIH-------SWTVPAFGV-----------------KQD---AVPGRLAQLWFRAEREGIF 223 (262)
T ss_dssp CEEEETTSEEEEEEEESS-SCE-------EEEEGGGTE-----------------EEE---ECBTCCEEEEEECCSCEEE
T ss_pred eEEEecCCEEEEEEEECc-ccc-------eeeecccCc-----------------eEE---ecCCceeEEEEecCCcEEE
Confidence 467899999999999875 333 455533321 234 3367788899999999999
Q ss_pred eeeecchhhh-hcceEEEEEEecCC
Q 009283 491 NIRSENWARQ-YLGQQFYLRVYSSA 514 (538)
Q Consensus 491 ~~HCHil~H~-d~GMm~~~~V~~p~ 514 (538)
...|--+-.. +..|-..++|++++
T Consensus 224 ~g~Cse~CG~~H~~M~~~v~vv~~~ 248 (262)
T 2gsm_B 224 FGQCSELCGISHAYMPITVKVVSEE 248 (262)
T ss_dssp EECCCSCCSTTGGGCCEEEEEECHH
T ss_pred EEEChHhcccCcccCeEEEEEEcHH
Confidence 9999865544 55677778887664
No 147
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=62.24 E-value=6 Score=32.94 Aligned_cols=49 Identities=20% Similarity=0.277 Sum_probs=30.8
Q ss_pred EEEEEeCCCCCc---eeeeccccCCCC---CCCCCCCCCCCCCCCCCeEEEEEEe
Q 009283 68 IISVFNALDEPF---LISWNGVQQRRN---SWQDGVYGTNCPIPPGKNFTYVLQV 116 (538)
Q Consensus 68 ~v~~~N~l~~~~---siH~HG~~~~~~---~~~DG~~~tq~~i~pG~~~~Y~f~~ 116 (538)
.|++.|....+. +=||.=.+..+. -..+||-|.|.-|.||++|+|.=-.
T Consensus 33 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~YtSg~ 87 (126)
T 1xvs_A 33 LITIKNLSSQTVQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTYSSGT 87 (126)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTCCEEEEEEESBTTBCCEECTTCEEEEEEEE
T ss_pred EEEEEECCCCCEEEEecEEEEEeCCCCEEEEECCceEcCCCcCCCCCceEEeCCc
Confidence 477778766553 347754332211 1246776788889999988886544
No 148
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=60.46 E-value=8.3 Score=32.66 Aligned_cols=49 Identities=20% Similarity=0.317 Sum_probs=30.9
Q ss_pred EEEEEeCCCCCc---eeeeccccCCCC---CCCCCCCCCCCCCCCCCeEEEEEEe
Q 009283 68 IISVFNALDEPF---LISWNGVQQRRN---SWQDGVYGTNCPIPPGKNFTYVLQV 116 (538)
Q Consensus 68 ~v~~~N~l~~~~---siH~HG~~~~~~---~~~DG~~~tq~~i~pG~~~~Y~f~~ 116 (538)
.|++.|....+. +=||.=.+..+. -..+||-|.|.-|.||++|+|.=-.
T Consensus 38 ~ItI~N~~~~~vQL~sRhW~ItD~~G~~~eV~G~GVVGeqPvL~PGe~F~YtSg~ 92 (139)
T 1xq4_A 38 TVRITNTGSHPAQVISRHWIITDGEERVQEVRGLGVVGQQPLLAPGETFEYTSGC 92 (139)
T ss_dssp EEEEEECSSSCEEEEEEEEEEECTTSCEEEEEEESSSSCCCEECTTCEEEEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEcCCc
Confidence 466778766553 347754432211 1246777788889999988886544
No 149
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=59.80 E-value=12 Score=34.50 Aligned_cols=77 Identities=5% Similarity=0.048 Sum_probs=54.2
Q ss_pred EEEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEccCcce
Q 009283 410 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 489 (538)
Q Consensus 410 ~~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~ 489 (538)
+.+.++.|+.|++.+++.+ -.| +|+|-+.| ...|. -||..-.+.|.++.||.
T Consensus 140 n~lvlP~~~~Vr~~vtS~D-ViH-------sf~vP~lg-----------------~K~Da---iPGr~n~~~~~~~~~G~ 191 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSED-VLH-------SWAVPSLG-----------------LKTDA---IPGRLNQTTLMSSRPGL 191 (227)
T ss_dssp SCEEEETTSCEEEEEEESS-SCE-------EEEEGGGT-----------------EEEEE---CTTCCEEEEECCSSCEE
T ss_pred ceEEEecCCEEEEEEEeCc-ccc-------eeeecccC-----------------cEEEe---cCCceEEEEEecCCcEE
Confidence 3467899999999999876 334 45553332 12343 35777888999999999
Q ss_pred eeeeecchhhh-hcceEEEEEEecCC
Q 009283 490 WNIRSENWARQ-YLGQQFYLRVYSSA 514 (538)
Q Consensus 490 w~~HCHil~H~-d~GMm~~~~V~~p~ 514 (538)
|...|.-+-.. |.-|-..++|++++
T Consensus 192 y~g~Cse~CG~~Hs~M~~~v~vv~~~ 217 (227)
T 1v54_B 192 YYGQCSEICGSNHSFMPIVLELVPLK 217 (227)
T ss_dssp EEECCCSCCSTTGGGCCEEEEEECHH
T ss_pred EEEEehhhcccccccCeEEEEEEcHH
Confidence 99999875554 45566777777664
No 150
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=58.87 E-value=26 Score=33.03 Aligned_cols=75 Identities=16% Similarity=0.115 Sum_probs=51.6
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCCCCCCCCCCCeEEEEEEecCCccceeeecC--chhhhh
Q 009283 57 PSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPS--LAFHKA 134 (538)
Q Consensus 57 P~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H--~~~q~~ 134 (538)
..|.+..|+.|++.+++. +--++...-.+.. +..+-||..-...|.+ +++|+|+..|. .+.. -
T Consensus 171 n~l~lP~g~~v~~~~tS~-DViHsf~ip~l~~------------k~da~PG~~n~~~~~~-~~~G~y~g~Cse~CG~~-H 235 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGA-DVIHSWTVPAFGV------------KQDAVPGRLAQLWFRA-EREGIFFGQCSELCGIS-H 235 (262)
T ss_dssp SCEEEETTSEEEEEEEES-SSCEEEEEGGGTE------------EEEECBTCCEEEEEEC-CSCEEEEECCCSCCSTT-G
T ss_pred ceEEEecCCEEEEEEEEC-cccceeeecccCc------------eEEecCCceeEEEEec-CCcEEEEEEChHhcccC-c
Confidence 469999999999999987 3322322222211 1235788888889998 68999999998 2322 2
Q ss_pred cceeeEEEEecC
Q 009283 135 AGGYGGIKIASR 146 (538)
Q Consensus 135 ~Gl~G~liV~~~ 146 (538)
..|.+.+.|.++
T Consensus 236 ~~M~~~v~vv~~ 247 (262)
T 2gsm_B 236 AYMPITVKVVSE 247 (262)
T ss_dssp GGCCEEEEEECH
T ss_pred ccCeEEEEEEcH
Confidence 348888877654
No 151
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=57.18 E-value=29 Score=33.39 Aligned_cols=77 Identities=18% Similarity=0.076 Sum_probs=52.7
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCCCCCCCCCCCeEEEEEEecCCccceeeecCc-hhhhhc
Q 009283 57 PSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSL-AFHKAA 135 (538)
Q Consensus 57 P~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~-~~q~~~ 135 (538)
..|.+..|+.|++.+++. +--++...-.+. -+.-.-||..-+..|.+ +++|+|+..|.. -+....
T Consensus 189 N~lvlP~g~~V~~~ltS~-DViHsf~iP~lg------------~k~daiPG~~n~~~~~~-~~~G~y~g~CsE~CG~~Hs 254 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTAT-DVIHAWTIPAFA------------VKQDAVPGRIAQLWFSV-DQEGVYFGQCSELCGINHA 254 (298)
T ss_dssp SCEEEESSSEEEEEEEES-SSCEEEEEGGGT------------EEEEECTTCCEEEEEEC-SSSEEEEECCCSCCSTTTT
T ss_pred ceEEEEcCCEEEEEEEeC-CccceeeEcccC------------ceEEecCCceEEEEEEe-CCCEEEEEEcccccCcCcc
Confidence 579999999999999996 222222222221 11335789988999998 689999999982 223334
Q ss_pred ceeeEEEEecCC
Q 009283 136 GGYGGIKIASRP 147 (538)
Q Consensus 136 Gl~G~liV~~~~ 147 (538)
.|.+.+.|.+++
T Consensus 255 ~M~~~v~vvs~~ 266 (298)
T 3hb3_B 255 YMPIVVKAVSQE 266 (298)
T ss_dssp SCCEEEEEECHH
T ss_pred CCeeEEEEEcHH
Confidence 588888887643
No 152
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=56.93 E-value=27 Score=28.34 Aligned_cols=46 Identities=15% Similarity=0.372 Sum_probs=31.6
Q ss_pred EEEEEEEecCCC-ceEEEEEeCC-eeEEEEEcCeecccceecEEEEcCCCeEEEEEEe
Q 009283 210 TYRFRISNVGIS-TSINFRIQGH-KMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRA 265 (538)
Q Consensus 210 ~~rlRliN~~~~-~~~~~~l~gh-~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~ 265 (538)
.|+|+|+|.+.. +.+.|++.|. .+.++ | + ..+.+.|||..++-|..
T Consensus 34 ~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~---g----~---~~i~v~~g~~~~~~v~v 81 (118)
T 2r39_A 34 TYTLKVINKTQQVQEYNLDVKGLNDVSWY---G----K---QTIQVEPGEVLNLPMSL 81 (118)
T ss_dssp EEEEEEEECSSSCEEEEEEEESCSSCEEE---S----C---CEEEECTTCEEEEEEEE
T ss_pred EEEEEEEECCCCCEEEEEEEeCCcccEEe---C----C---CcEEECCCCEEEEEEEE
Confidence 699999999866 4667777774 23332 2 1 14899999987766654
No 153
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=55.93 E-value=7.4 Score=32.75 Aligned_cols=49 Identities=20% Similarity=0.345 Sum_probs=30.6
Q ss_pred EEEEEeCCCCCc---eeeeccccCCCC---CCCCCCCCCCCCCCCCCeEEEEEEe
Q 009283 68 IISVFNALDEPF---LISWNGVQQRRN---SWQDGVYGTNCPIPPGKNFTYVLQV 116 (538)
Q Consensus 68 ~v~~~N~l~~~~---siH~HG~~~~~~---~~~DG~~~tq~~i~pG~~~~Y~f~~ 116 (538)
.|++.|....+. +=||.=.+..+. -..+||-|.|.-|.||++|+|.=-.
T Consensus 33 ~ItI~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVGeqP~L~PGe~F~YtSg~ 87 (134)
T 1tza_A 33 TITIINLGEQAAKLETRHWIITDANGKTSEVQGAGVVGETPTIPPNTAYQYTSGT 87 (134)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEEESBTTBCCEECTTEEEEEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEEcCceEcCCCcCCCCCceEEcCCc
Confidence 466678766543 346654332211 1246776788889999988886544
No 154
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=46.38 E-value=30 Score=31.85 Aligned_cols=76 Identities=12% Similarity=-0.032 Sum_probs=50.9
Q ss_pred CceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCCCCCCCCCCCeEEEEEEecCCccceeeecC--chhhh
Q 009283 56 GPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPS--LAFHK 133 (538)
Q Consensus 56 gP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H--~~~q~ 133 (538)
...+.+..|..|++.++.. +--++...-.+.. .+| .-||..-...|.+ +++|+|+..|. .|..
T Consensus 139 dn~lvlP~~~~Vr~~vtS~-DViHsf~vP~lg~----K~D--------aiPGr~n~~~~~~-~~~G~y~g~Cse~CG~~- 203 (227)
T 1v54_B 139 DNRVVLPMEMTIRMLVSSE-DVLHSWAVPSLGL----KTD--------AIPGRLNQTTLMS-SRPGLYYGQCSEICGSN- 203 (227)
T ss_dssp SSCEEEETTSCEEEEEEES-SSCEEEEEGGGTE----EEE--------ECTTCCEEEEECC-SSCEEEEECCCSCCSTT-
T ss_pred CceEEEecCCEEEEEEEeC-cccceeeecccCc----EEE--------ecCCceEEEEEec-CCcEEEEEEehhhcccc-
Confidence 3679999999999999986 3333332222211 233 5678888888888 68999999998 2322
Q ss_pred hcceeeEEEEecC
Q 009283 134 AAGGYGGIKIASR 146 (538)
Q Consensus 134 ~~Gl~G~liV~~~ 146 (538)
..-|.+.+.+.++
T Consensus 204 Hs~M~~~v~vv~~ 216 (227)
T 1v54_B 204 HSFMPIVLELVPL 216 (227)
T ss_dssp GGGCCEEEEEECH
T ss_pred cccCeEEEEEEcH
Confidence 2347777776653
No 155
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=46.27 E-value=7.9 Score=32.22 Aligned_cols=23 Identities=4% Similarity=0.264 Sum_probs=19.2
Q ss_pred eEEEecCCEEEEEEEeCCCCCceeeecc
Q 009283 58 SIEAVTNDNLIISVFNALDEPFLISWNG 85 (538)
Q Consensus 58 ~i~v~~Gd~v~v~~~N~l~~~~siH~HG 85 (538)
-|.|+.|++|++.+.|. ++-|.=
T Consensus 72 ~InV~~GETVrF~v~nk-----t~~W~F 94 (131)
T 2wtp_A 72 YVNVDSGETVAFRAGEK-----IVAWTF 94 (131)
T ss_dssp EEEEETTCEEEEEETTE-----EEEEEE
T ss_pred EEEecCCCEEEEEeCCc-----EEEEEE
Confidence 39999999999999998 555554
No 156
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=46.19 E-value=25 Score=29.17 Aligned_cols=69 Identities=17% Similarity=0.255 Sum_probs=39.4
Q ss_pred EEEcCcCcCceEEEecCCEEEEEEEeCCC---CCceeee----ccccCCC-CCCCCCCC-CCCCCCCCCCeEEEEEEec
Q 009283 48 ILINGQFPGPSIEAVTNDNLIISVFNALD---EPFLISW----NGVQQRR-NSWQDGVY-GTNCPIPPGKNFTYVLQVK 117 (538)
Q Consensus 48 ~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~---~~~siH~----HG~~~~~-~~~~DG~~-~tq~~i~pG~~~~Y~f~~~ 117 (538)
..++|- +.+.=.+++|..+.+.+.=..+ ....... .|+..+- .+..|+=. ++.|||.+|+.++|.+.++
T Consensus 18 V~V~~C-~~~PC~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~lp 95 (130)
T 1nep_A 18 VNVSPC-PTQPCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKLP 95 (130)
T ss_dssp EEEESC-SSSSEEEETTCEEEEEEEEEESSCBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEEE
T ss_pred EEECCC-CCCCCEEEcCCeEEEEEEEEcccccceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEeE
Confidence 344442 2455667888888888772222 2222222 3333321 12234432 3679999999999998875
No 157
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=46.06 E-value=14 Score=35.84 Aligned_cols=75 Identities=11% Similarity=0.103 Sum_probs=52.2
Q ss_pred EEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEccCccee
Q 009283 411 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 490 (538)
Q Consensus 411 ~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 490 (538)
.+.++.|+.|++.+++.+ -.| .|+|-+.+. ..| .-||....+.|.++.||.|
T Consensus 152 ~l~lP~g~~V~~~lTS~D-ViH-------sf~IP~lg~-----------------k~D---aiPGr~n~~~~~~~~~G~y 203 (315)
T 1fft_B 152 EIAFPANTPVYFKVTSNS-VMN-------SFFIPRLGS-----------------QIY---AMAGMQTRLHLIANEPGTY 203 (315)
T ss_dssp BCCCCSSSEEEEEECBSS-SCE-------EEEEGGGTE-----------------EEE---ECBTSCEEEEEECCSCBCC
T ss_pred eEEEeCCCEEEEEEEeCC-ccc-------eeeecccCc-----------------EEe---ecCCcceeeEEecCCCeEE
Confidence 356789999999999876 334 455533321 234 3357788899999999999
Q ss_pred eeeecchhhh-hcceEEEEEEe-cC
Q 009283 491 NIRSENWARQ-YLGQQFYLRVY-SS 513 (538)
Q Consensus 491 ~~HCHil~H~-d~GMm~~~~V~-~p 513 (538)
...|--+-.. |..|-..++|+ ++
T Consensus 204 ~g~CsE~CG~~Hs~M~~~v~vv~~~ 228 (315)
T 1fft_B 204 DGISASYSGPGFSGMKFKAIATPDR 228 (315)
T ss_dssp EEBCCSCCSTTTTTCCEECCBCSST
T ss_pred EEeccccchhhHHhccceEEEecCH
Confidence 9999875555 44566777776 44
No 158
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=45.69 E-value=29 Score=28.78 Aligned_cols=62 Identities=8% Similarity=0.115 Sum_probs=36.4
Q ss_pred CceEEEecCCEEEEEEEeCCCC---Cc--eee--eccccCCCC-CCCCCCCCCCCCCCCCCeEEEEEEec
Q 009283 56 GPSIEAVTNDNLIISVFNALDE---PF--LIS--WNGVQQRRN-SWQDGVYGTNCPIPPGKNFTYVLQVK 117 (538)
Q Consensus 56 gP~i~v~~Gd~v~v~~~N~l~~---~~--siH--~HG~~~~~~-~~~DG~~~tq~~i~pG~~~~Y~f~~~ 117 (538)
.+.=.+++|+.+.+.+.=..++ .. .+| ..|+..+-+ ...|+=-++.|||.+|+.++|.+..+
T Consensus 24 ~~pC~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~~g~~ip~p~~~~daC~~~~CPl~~G~~~~y~~~~~ 93 (129)
T 1xwv_A 24 SDPCIIHRGKPFTLEALFDANQNTKTAKIEIKASLDGLEIDVPGIDTNACHFMKCPLVKGQQYDAKYTWN 93 (129)
T ss_dssp TSCEEEETTSEEEEEEEEECCSCBSCCEEEEEEEETTEEECCCSCCCBGGGTSCSSBCTTCEEEEEEEEE
T ss_pred CCCCEEeCCCeEEEEEEEECCCccceEEEEEEEEEcCEEeecCCCCCCccCCccCcccCCEEEEEEEEeE
Confidence 3455678888888887722221 11 222 234443321 12233223679999999999998774
No 159
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=43.86 E-value=45 Score=32.75 Aligned_cols=15 Identities=20% Similarity=0.337 Sum_probs=13.4
Q ss_pred CCCCCCeEEEEEEec
Q 009283 103 PIPPGKNFTYVLQVK 117 (538)
Q Consensus 103 ~i~pG~~~~Y~f~~~ 117 (538)
.|+||++.+.+|.+.
T Consensus 96 ~L~pG~Sve~~~dla 110 (343)
T 2x3c_A 96 LLKAGQSLTVQAEVS 110 (343)
T ss_dssp EECTTCEEEEEEECT
T ss_pred EeCCCCeEEEEEehh
Confidence 399999999999984
No 160
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=43.57 E-value=60 Score=32.20 Aligned_cols=76 Identities=21% Similarity=0.311 Sum_probs=0.0
Q ss_pred EEEEEEEeCCCCCce--------eeeccccCCCCC--CCC------CCCCCCCCCCCCCeEEEEEEecCCc---------
Q 009283 66 NLIISVFNALDEPFL--------ISWNGVQQRRNS--WQD------GVYGTNCPIPPGKNFTYVLQVKDQI--------- 120 (538)
Q Consensus 66 ~v~v~~~N~l~~~~s--------iH~HG~~~~~~~--~~D------G~~~tq~~i~pG~~~~Y~f~~~~~~--------- 120 (538)
++.++|+|+.+++.. ++|-.-.+.... +.| |.. +..||.|||+.+.+.++.+.+
T Consensus 301 ~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~-s~~pI~PGETrt~~V~a~da~WeveRL~~l 379 (419)
T 3rfr_A 301 TINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLS-NDDVIAPGESKEIVVKIQDARWDIERLSDL 379 (419)
T ss_dssp EEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCC-CCCCBCTTCEEEEEEEEECHHHHHTTGGGG
T ss_pred EEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccCCC-CCCCcCCCcceEEEEEeehHHHHHHHHhhh
Q ss_pred ---------cceeeecCchhhhhcceeeEEE
Q 009283 121 ---------GSYFYFPSLAFHKAAGGYGGIK 142 (538)
Q Consensus 121 ---------Gt~wYH~H~~~q~~~Gl~G~li 142 (538)
|..++.+-.+..+..=+.|++|
T Consensus 380 ~~D~dSrfgGLLfF~d~~G~r~i~~I~~pvI 410 (419)
T 3rfr_A 380 AYDTDSQVGGLLFFFTPDGKRFAAEIGGPVI 410 (419)
T ss_dssp GGSSSCEEEEEEEEECSSSCEEEEEEEEECE
T ss_pred hcCchhheeEEEEEEcCCCCEEEEeccCccc
No 161
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=39.31 E-value=27 Score=28.45 Aligned_cols=77 Identities=9% Similarity=0.112 Sum_probs=46.4
Q ss_pred eEEEecCCEEEEEEEeCCCCCceeee---ccccCCCCCCCCCCCCCCCCCCCCCeEEEEEEecCCccceeeecCchhhhh
Q 009283 58 SIEAVTNDNLIISVFNALDEPFLISW---NGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKA 134 (538)
Q Consensus 58 ~i~v~~Gd~v~v~~~N~l~~~~siH~---HG~~~~~~~~~DG~~~tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~ 134 (538)
.++++.||.|++++... .+++.- -+... -. ..++. .....| ...+++ +.+|++||-|-...|=.
T Consensus 27 ~~~f~vGD~L~F~y~~~---~HsV~~V~~~~y~~-C~-~~~~~----~~~~~G---~~~v~l-~~~G~~yFic~~~~HC~ 93 (116)
T 1x9u_A 27 GKTFRVGDELEFDFAAG---MHDVAVVTKDAFDN-CK-KENPI----SHMTTP---PVKIML-NTTGPQYYICTVGDHCR 93 (116)
T ss_dssp TCCEETTCEEEECCCTT---TCCEEEECHHHHHT-TC-CSSCS----EEECSS---SEEEEC-CSCEEEEEECCSTTTTT
T ss_pred cccCcCCCEEEEEecCC---CCeEEEEChhhcCc-cC-CCCCc----cccCCC---CeEEEE-CCCCCEEEECCCCCccc
Confidence 36899999999988643 222211 01100 00 01110 011223 246777 57999999999888888
Q ss_pred cceeeEE-EEecCC
Q 009283 135 AGGYGGI-KIASRP 147 (538)
Q Consensus 135 ~Gl~G~l-iV~~~~ 147 (538)
.||...| .|....
T Consensus 94 ~Gmkl~In~V~~~~ 107 (116)
T 1x9u_A 94 VGQKLSINVVGAGG 107 (116)
T ss_dssp TTCEEEEEEECC--
T ss_pred cCCEEEEEEECCCC
Confidence 9999999 887654
No 162
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=35.95 E-value=54 Score=26.86 Aligned_cols=59 Identities=24% Similarity=0.254 Sum_probs=40.1
Q ss_pred eEEEecC-CEEEEEEEeCCCCCce--eeeccccCCCCCCCCCC---------C-CCCCCCCCCCeEEEEEEe
Q 009283 58 SIEAVTN-DNLIISVFNALDEPFL--ISWNGVQQRRNSWQDGV---------Y-GTNCPIPPGKNFTYVLQV 116 (538)
Q Consensus 58 ~i~v~~G-d~v~v~~~N~l~~~~s--iH~HG~~~~~~~~~DG~---------~-~tq~~i~pG~~~~Y~f~~ 116 (538)
.|++++| .++.++|+|.-+.+.- -|+|=..+......|=. | ||..-..||++.+.+...
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV~ 89 (126)
T 4ac7_B 18 EIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELTE 89 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEEE
T ss_pred CEEeCCCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEEE
Confidence 4777787 6899999999988754 57777766544333321 2 244457888888777764
No 163
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=35.95 E-value=54 Score=26.86 Aligned_cols=59 Identities=24% Similarity=0.254 Sum_probs=40.1
Q ss_pred eEEEecC-CEEEEEEEeCCCCCce--eeeccccCCCCCCCCCC---------C-CCCCCCCCCCeEEEEEEe
Q 009283 58 SIEAVTN-DNLIISVFNALDEPFL--ISWNGVQQRRNSWQDGV---------Y-GTNCPIPPGKNFTYVLQV 116 (538)
Q Consensus 58 ~i~v~~G-d~v~v~~~N~l~~~~s--iH~HG~~~~~~~~~DG~---------~-~tq~~i~pG~~~~Y~f~~ 116 (538)
.|++++| .++.++|+|.-+.+.- -|+|=..+......|=. | ||..-..||++.+.+...
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV~ 89 (126)
T 4ubp_B 18 EIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELTE 89 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEEE
T ss_pred CEEeCCCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEEE
Confidence 4777787 6899999999988754 57777766544333321 2 244457888888777764
No 164
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=34.77 E-value=57 Score=30.57 Aligned_cols=32 Identities=16% Similarity=0.234 Sum_probs=22.2
Q ss_pred eeeEEEEEcCc---------Cc----CceEEEecCCEEEEEEEeC
Q 009283 43 VKQQGILINGQ---------FP----GPSIEAVTNDNLIISVFNA 74 (538)
Q Consensus 43 ~~~~~~~~Ng~---------~p----gP~i~v~~Gd~v~v~~~N~ 74 (538)
...++|.-+|. .| .|..|+++|+.=.||+...
T Consensus 58 ~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl~pg~~q~lRI~~~ 102 (257)
T 3q48_A 58 VLAQAWIDDGRQDVPPEELQVPFSVTPAVTRVEPNGGAVLRIAYL 102 (257)
T ss_dssp EEEEEEEESSCCSSCGGGGCCSEEEESSEEEECTTEEEEEEEEEC
T ss_pred EEEEEEEEcCCCccCcccccCCEEEcCCEEEECCCCceEEEEEEC
Confidence 44566777652 12 5888999998888888653
No 165
>2r5o_A Putative ATP binding component of ABC- transporter; immunoglobulin fold, carbohydrate binding, domain swapping, O antigen export; HET: PG4; 1.30A {Escherichia coli}
Probab=34.10 E-value=1e+02 Score=26.99 Aligned_cols=85 Identities=7% Similarity=-0.033 Sum_probs=47.8
Q ss_pred eEEEcCCCCCCceEEEecCCEEEEEEEecCCCceEEEEEeCCeeEEEEEcCeecccc----eecEE--E-EcCCCeEEEE
Q 009283 190 GLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQN----TYDSL--D-IHLGQSYSVL 262 (538)
Q Consensus 190 ~~liNG~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~----~~~~v--~-l~pgeR~dv~ 262 (538)
..+.|..+ .+.-.+..|+.+++|+-=......-.+.+ .|.+...+|..+--. ....+ . +.+|+.+.+.
T Consensus 53 v~l~d~~G--~~~~~~~~Ge~v~l~i~~~~~~~i~~~v~---G~~Ik~~~G~~I~g~nT~~~~~~~~~~~~~~G~~~~v~ 127 (188)
T 2r5o_A 53 YHIQSAGV--DFPPSLTGNQQTDFLMKVVFEYDFDCVVP---GILIKTLDGLFLYGTNSFLASEGRENISVSRGDVRVFK 127 (188)
T ss_dssp EEEEETTE--ESCSSEETTCEEEEEEEEEESSCEEEEEE---EEEEEETTCCEEEEEEHHHHTTTCCCEEECTTCEEEEE
T ss_pred EEEEECCC--CEeeEEeCCCEEEEEEEEEECCcCCccEE---EEEEECCCCCEEEecCcccccccccccccCCCCEEEEE
Confidence 34556555 45556789999888766544432222221 244445566655210 01112 3 6789976655
Q ss_pred EEeCC--CCcceEEEEEee
Q 009283 263 VRADQ--PPQGYYIVISTR 279 (538)
Q Consensus 263 v~~~~--~~g~y~i~~~~~ 279 (538)
+.++- .+|+|.+.+...
T Consensus 128 f~f~l~L~~G~Y~lsv~i~ 146 (188)
T 2r5o_A 128 FSLPVDLNSGDYLLSFGIS 146 (188)
T ss_dssp EEEECCBCSEEEEEEEEEE
T ss_pred EEEecccCCCeEEEEEEEe
Confidence 55442 689999987653
No 166
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=31.85 E-value=75 Score=24.62 Aligned_cols=68 Identities=13% Similarity=0.117 Sum_probs=36.2
Q ss_pred EecCCEEEEEEEecCCCceEEEEEeCC--eeEEEEEcCeecccceecEEEEcCCCeEEEEEEeCC--CCcceEEEEEe
Q 009283 205 VDQGKTYRFRISNVGISTSINFRIQGH--KMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ--PPQGYYIVIST 278 (538)
Q Consensus 205 v~~G~~~rlRliN~~~~~~~~~~l~gh--~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~--~~g~y~i~~~~ 278 (538)
-+|||++++|++--... ... ..+. .+++..-+|+.+.. ..........++..+.+++ ..|.|.|++..
T Consensus 13 YrPGetV~~~~~~~~~~-~~p--~~~~~~~v~l~dp~g~~v~~---~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~ 84 (102)
T 2p9r_A 13 YKPGQTVKFRVVSMDEN-FHP--LNELIPLVYIQDPKGNRIAQ---WQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQK 84 (102)
T ss_dssp ECTTCEEEEEEEEECGG-GCB--CCCEEEEEEEECTTSCEEEE---EEEEECBTTEEEEEEECCSSCCCEEEEEEEEC
T ss_pred cCCCCEEEEEEEEECCC-CcC--CCCCceEEEEECCCCCEEEE---EEeecCCCCEEEEEEECCCCCCCeeEEEEEEE
Confidence 48999999997754322 111 1111 23444455554311 1122223445666666654 45899998865
No 167
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=31.78 E-value=2.1e+02 Score=23.40 Aligned_cols=66 Identities=12% Similarity=0.056 Sum_probs=44.3
Q ss_pred EEecCCEE--EEEEEecCCCceEEEEEeCCeeEEEEEcCeecccceecEEEEcCCCeEEEEEEeCC-CCcceEEEEEe
Q 009283 204 TVDQGKTY--RFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ-PPQGYYIVIST 278 (538)
Q Consensus 204 ~v~~G~~~--rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~-~~g~y~i~~~~ 278 (538)
.+.+|+.+ +..+-|.|....-.+.+ .+ -.||..+. ...+.|++|+.-.+.+.... .+|.|.+.+..
T Consensus 28 ~v~~G~~~ti~vtV~N~G~~~a~~~~V-----~l-yvng~~v~---t~~v~La~G~s~tv~f~~~~~~~G~~~v~AvV 96 (127)
T 3idu_A 28 VVGVNKLAEYEVHVKNLGGIGVPSTKV-----RV-YINGTLYK---NWTVSLGPKEEKVLTFNWTPTQEGMYRINATV 96 (127)
T ss_dssp EECTTCCEEEEEEEEECSSSCEEEEEE-----EE-EETTEEEE---EEEEEECTTCEEEEEEEECCSSCEEEEEEEEE
T ss_pred cccCCCEEEEEEEEEECCCCccCCcEE-----EE-EECCEEEe---eEEeccCCCCeEEEEEEEEcCCCcEEEEEEEE
Confidence 67888877 56688999875443332 22 23776543 22457999999888887653 56888887754
No 168
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=30.05 E-value=1.9e+02 Score=27.12 Aligned_cols=62 Identities=6% Similarity=-0.115 Sum_probs=36.5
Q ss_pred EEEEEecCCCceEEEEEeCCeeEEEEEcCeecccceecEEEEcCCCeEEEEEEeCCCCcceEEEEEe
Q 009283 212 RFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVIST 278 (538)
Q Consensus 212 rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~ 278 (538)
-+=|||.+.. ..+.++|..+..++.--..-+...-+.+.|..|. +|.|++. .++.+++..+.
T Consensus 50 E~~iv~l~G~--~~V~~~g~~~~~~g~R~svF~~~~p~~lYvp~g~--~v~i~a~-~~~~~~v~sAp 111 (270)
T 2qjv_A 50 ERCLVLVAGL--ASVXAADSFFYRIGQRMSPFERIPAYSVYLPHHT--EAXVTAE-TDLELAVCSAP 111 (270)
T ss_dssp EEEEEEEESC--EEEEETTEEEEEECCCSSGGGCSCCCEEEECSSC--CEEEEES-SSEEEEEEEEE
T ss_pred EEEEEEecce--EEEEECCEEEeccccccccccCCCCcEEEECCCC--EEEEEec-CCceEEEEeee
Confidence 4557777664 4567777777665321111111123789999999 5666666 45667666554
No 169
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=28.02 E-value=23 Score=29.42 Aligned_cols=21 Identities=29% Similarity=0.387 Sum_probs=17.0
Q ss_pred CceEEEecCCEEEEEEEecCC
Q 009283 200 ANTFTVDQGKTYRFRISNVGI 220 (538)
Q Consensus 200 ~p~~~v~~G~~~rlRliN~~~ 220 (538)
.-.|.|++||+|||.+.|-+-
T Consensus 70 ~k~InV~~GETVrF~v~nkt~ 90 (131)
T 2wtp_A 70 MRYVNVDSGETVAFRAGEKIV 90 (131)
T ss_dssp CCEEEEETTCEEEEEETTEEE
T ss_pred CeEEEecCCCEEEEEeCCcEE
Confidence 355999999999999988443
No 170
>2h7w_A Chagasin; beta-strands, immunoglobulin-fold, hydrolase inhibitor; 1.70A {Trypanosoma cruzi} SCOP: b.1.26.1 PDB: 2nnr_A 2oul_B 3cbj_B 3cbk_B 3e1z_A 2fo8_A 2nqd_A*
Probab=27.76 E-value=2.4e+02 Score=23.20 Aligned_cols=64 Identities=13% Similarity=0.180 Sum_probs=36.4
Q ss_pred CceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCC--------CCCCCCCCCCCeEEEEEEecCCccc
Q 009283 56 GPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGV--------YGTNCPIPPGKNFTYVLQVKDQIGS 122 (538)
Q Consensus 56 gP~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~--------~~tq~~i~pG~~~~Y~f~~~~~~Gt 122 (538)
|-+|.++.||++.|.|.-+-... --|.=.......-.|++ |-....+..|....+.|++. ++|+
T Consensus 32 ~~~I~v~~Ge~~~I~L~~NPTTG--Y~W~~~~~~~~~L~~~~~~v~~~y~p~~~~~vGagG~~~w~f~A~-~~G~ 103 (131)
T 2h7w_A 32 GATLTVAVGELVEIQLPSNPTTG--FAWYFEGGTKESPNESMFTVENKYFPPDSKLLGAGGTEHFHVTVK-AAGT 103 (131)
T ss_dssp TCEEEECTTCEEEEEEEECGGGS--CEEEBTTTBSSCSCTTTEEEEEEEECCTTCCTTCCEEEEEEEEEC-SSEE
T ss_pred CCEEEEeCCCEEEEEeCCCCCCC--eEEEEecCCCccccccceeecceeeeCCCCCcCCCcEEEEEEEEc-cCce
Confidence 66999999999999999763222 22222111111112322 11112356677888888885 6775
No 171
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=24.70 E-value=70 Score=25.27 Aligned_cols=54 Identities=15% Similarity=0.004 Sum_probs=34.7
Q ss_pred CEEEEEEEeCCCCC---ceeeeccccCCCCCCCCCCCCCCCCCCCCCeEEEEEEec-CCccce
Q 009283 65 DNLIISVFNALDEP---FLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVK-DQIGSY 123 (538)
Q Consensus 65 d~v~v~~~N~l~~~---~siH~HG~~~~~~~~~DG~~~tq~~i~pG~~~~Y~f~~~-~~~Gt~ 123 (538)
=.+.|.|+|-|+.+ ..++..|.-. ..+.-.....|.||++..+++... -.+|..
T Consensus 22 l~v~vsf~NPL~~~L~~c~~~vEG~GL-----~~~~~~~~~~v~pg~~~~~~~~~~P~~~G~~ 79 (102)
T 2xzz_A 22 CEVQIVFKNPLPVTLTNVVFRLEGSGL-----QRPKILNVGDIGGNETVTLRQSFVPVRPGPR 79 (102)
T ss_dssp EEEEEEEECCSSSCBCSEEEEEEETTT-----EEEEEEEECCBCTTCEEEEEEEECCCSCSSC
T ss_pred EEEEEEEECCCCCcccCEEEEEECCCC-----CcceEEEcCcCCCCCEEEEEEEEecCcccce
Confidence 35788999999854 4567767422 111101124599999999999883 457753
No 172
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=24.06 E-value=78 Score=25.31 Aligned_cols=37 Identities=14% Similarity=0.273 Sum_probs=0.0
Q ss_pred EEEEEecCCccceeeecCchhhhhcceeeEEEEecCCC
Q 009283 111 TYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASRPL 148 (538)
Q Consensus 111 ~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~ 148 (538)
...+++ +.+|++||-|-...|=..||...|.|.....
T Consensus 71 ~~~v~L-~~~G~~yFic~~~gHC~~GmKl~I~V~~~~s 107 (109)
T 1ws8_A 71 ADSIPL-KRPGTFYFLCGIPGHCQLGQKVEIKVDPGSS 107 (109)
T ss_dssp EEEEEC-CSSEEEEEECCSTTTTTTTCEEEEEECC---
T ss_pred CEEEEE-CCCcCEEEECCCCCcccCCCEEEEEEcCCCC
No 173
>3qga_A UREA2, fusion of urease beta and gamma subunits; iron metalloenzyme, alpha-beta barrel, hydrolase; HET: FME KCX; 3.00A {Helicobacter mustelae} PDB: 3qgk_A*
Probab=23.95 E-value=2.3e+02 Score=25.58 Aligned_cols=64 Identities=19% Similarity=0.055 Sum_probs=42.2
Q ss_pred cCcCce-------EEEecC-CEEEEEEEeCCCCCce--eeeccccCCCCCCCCCC---------C-CCCCCCCCCCeEEE
Q 009283 53 QFPGPS-------IEAVTN-DNLIISVFNALDEPFL--ISWNGVQQRRNSWQDGV---------Y-GTNCPIPPGKNFTY 112 (538)
Q Consensus 53 ~~pgP~-------i~v~~G-d~v~v~~~N~l~~~~s--iH~HG~~~~~~~~~DG~---------~-~tq~~i~pG~~~~Y 112 (538)
..||-. |++++| .++.+.|+|..+.+.- -|+|=..+...-..|=. | ||..-..||++.+.
T Consensus 105 ~~PGei~~~~~g~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V 184 (225)
T 3qga_A 105 FKAGEIKFASDKDIELNAGKEITELKVTNKGPKSLHVGSHFHFFEANRALEFDREKAYGKRLDIPSGNTLRIGAGETKTV 184 (225)
T ss_dssp CCTTCEECSCSCCEETTTTCCCEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEE
T ss_pred CCCCeEeccCCCceecCCCCceEEEEEEECCCCceeeccccchhhcCchhhccHHHhCCcccccCCCCeEeeCCCCeeEE
Confidence 457755 666776 5899999999988754 57777766543333321 2 24445778888877
Q ss_pred EEEe
Q 009283 113 VLQV 116 (538)
Q Consensus 113 ~f~~ 116 (538)
+...
T Consensus 185 ~LV~ 188 (225)
T 3qga_A 185 HLIP 188 (225)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7764
No 174
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=23.41 E-value=3.8e+02 Score=26.05 Aligned_cols=46 Identities=22% Similarity=0.211 Sum_probs=33.2
Q ss_pred eeEEEEEcCeecc----------cceecEEEEcCCCeEEEEEEeCC-----CCcceEEEEEe
Q 009283 232 KMLLVEVEGTHTL----------QNTYDSLDIHLGQSYSVLVRADQ-----PPQGYYIVIST 278 (538)
Q Consensus 232 ~~~via~DG~~~~----------p~~~~~v~l~pgeR~dv~v~~~~-----~~g~y~i~~~~ 278 (538)
.|.| ..||..++ |...+-+.|+|||.+++.|++.. .+|.|.+.+..
T Consensus 67 ~~~V-~~~G~~v~f~Gi~~~~~~~~~d~f~~L~pG~Sve~~~dla~~ydLs~gG~y~v~~~g 127 (343)
T 2x3c_A 67 LFLV-ERDGQPVSYEGALIKRAAPTDKDFQLLKAGQSLTVQAEVSGLYDMSAQGQYSIRYQL 127 (343)
T ss_dssp CEEE-EETTEECCBCSCCCCCCCCCGGGEEEECTTCEEEEEEECTTTBTCCSCEEEEEEEC-
T ss_pred eEEE-EeCCcccceeeEEEeccCCChhhcEEeCCCCeEEEEEehhhccccCCCceEEEEEee
Confidence 4555 47777652 22346789999999999999864 56889988754
No 175
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=22.94 E-value=44 Score=32.40 Aligned_cols=74 Identities=11% Similarity=-0.065 Sum_probs=49.8
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceeeeccccCCCCCCCCCCCCCCCCCCCCCeEEEEEEecCCccceeeecCc-hhhhhc
Q 009283 57 PSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSL-AFHKAA 135 (538)
Q Consensus 57 P~i~v~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~~~tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~-~~q~~~ 135 (538)
..|.+..|..|++.++.. +--++...-.+. .+.-.-||..-...|.+ +++|+|+..|.. -+.--.
T Consensus 151 n~l~lP~g~~V~~~lTS~-DViHsf~IP~lg------------~k~DaiPGr~n~~~~~~-~~~G~y~g~CsE~CG~~Hs 216 (315)
T 1fft_B 151 NEIAFPANTPVYFKVTSN-SVMNSFFIPRLG------------SQIYAMAGMQTRLHLIA-NEPGTYDGISASYSGPGFS 216 (315)
T ss_dssp SBCCCCSSSEEEEEECBS-SSCEEEEEGGGT------------EEEEECBTSCEEEEEEC-CSCBCCEEBCCSCCSTTTT
T ss_pred ceEEEeCCCEEEEEEEeC-CccceeeecccC------------cEEeecCCcceeeEEec-CCCeEEEEeccccchhhHH
Confidence 468899999999999876 222232222221 12336788888889998 699999999972 222234
Q ss_pred ceeeEEEEe
Q 009283 136 GGYGGIKIA 144 (538)
Q Consensus 136 Gl~G~liV~ 144 (538)
.|.+.++|.
T Consensus 217 ~M~~~v~vv 225 (315)
T 1fft_B 217 GMKFKAIAT 225 (315)
T ss_dssp TCCEECCBC
T ss_pred hccceEEEe
Confidence 577877776
No 176
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=21.06 E-value=85 Score=25.43 Aligned_cols=34 Identities=15% Similarity=0.072 Sum_probs=27.7
Q ss_pred EEEccCcceeeeeecchhhhhcceEEEE-EEecCC
Q 009283 481 YVPLDNVGMWNIRSENWARQYLGQQFYL-RVYSSA 514 (538)
Q Consensus 481 rf~adnpG~w~~HCHil~H~d~GMm~~~-~V~~p~ 514 (538)
.|..+.+|.+-|=|=...|=..||-+.+ .|..+.
T Consensus 73 ~v~l~~~G~~yFic~~~~HC~~Gmkl~In~V~~~~ 107 (116)
T 1x9u_A 73 KIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAGG 107 (116)
T ss_dssp EEECCSCEEEEEECCSTTTTTTTCEEEEEEECC--
T ss_pred EEEECCCCCEEEECCCCCccccCCEEEEEEECCCC
Confidence 4556889999999999999999999999 776543
No 177
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=20.38 E-value=1.2e+02 Score=25.48 Aligned_cols=39 Identities=13% Similarity=0.231 Sum_probs=0.0
Q ss_pred EEEe-cCCccceeeecCchhhhhcceeeEEEEecCCCCCCC
Q 009283 113 VLQV-KDQIGSYFYFPSLAFHKAAGGYGGIKIASRPLIPVP 152 (538)
Q Consensus 113 ~f~~-~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~ 152 (538)
.|++ . .+|++||-|-...|=..||...|.|......+.+
T Consensus 76 ~v~L~~-~~G~~YFicg~~gHC~~GmKl~I~V~~~~~~~~~ 115 (138)
T 1jer_A 76 VIERLD-ELGMHYFVCTVGTHCSNGQKLSINVVAANATVSM 115 (138)
T ss_dssp EEEECC-SSEEEEEECCSTTTGGGTCEEEEEEECCC-----
T ss_pred EEEecc-CCcCEEEEcCCCCccccCCEEEEEEcCCCCCCCC
Done!