BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009284
(538 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255542852|ref|XP_002512489.1| 3-5 exonuclease, putative [Ricinus communis]
gi|223548450|gb|EEF49941.1| 3-5 exonuclease, putative [Ricinus communis]
Length = 570
Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/563 (69%), Positives = 454/563 (80%), Gaps = 44/563 (7%)
Query: 1 MGLEERVAESCINGHKADCAWTVSVHTFSDITNISPVVFLYLLKECYIHGTCKATRKFRA 60
MGLEE + I KA+ T+ +H FSD+T +SPVVFLYLLKECYIHG+CKAT+KFRA
Sbjct: 1 MGLEETID---IKKDKANQTLTICLHAFSDLTYVSPVVFLYLLKECYIHGSCKATKKFRA 57
Query: 61 LQQQVSQALCNSPEPGPATFIVRCLYVLPIFGVYSEGFSHLIISALRRHQKTTVNSADST 120
LQQQV Q L NSP+ GPATF++ CL+VLPIFG+YSEGFSHLI+SALRR K + S D+
Sbjct: 58 LQQQVHQVLDNSPKSGPATFVIHCLHVLPIFGLYSEGFSHLIVSALRRFLKLSPTSEDTL 117
Query: 121 QAKEIAAYLFLDITGGFVDHDEKLMVKILEAFDVRLTDIEKAITQLKAQNEHRFDTAKTV 180
QAK +AA LFLDI GG VDHDE+L++KI+EAFDV+LT+IE AI +LKA+N++RFDTAK
Sbjct: 118 QAKGLAAQLFLDIVGGLVDHDERLLIKIVEAFDVKLTNIEAAIQRLKARNDNRFDTAKKF 177
Query: 181 IEQYIFAMIDSQSYMTAVSLLEHFSIRQSGESFLLKMIQNKEFKAAEKWATFMGKPIL-- 238
+EQYIF +++SQSYMTAV+LLEHFSIRQSG+SFLLKM+ NK+ +AAEKWATFMGKP+L
Sbjct: 178 VEQYIFKLVESQSYMTAVTLLEHFSIRQSGQSFLLKMMDNKQSQAAEKWATFMGKPMLCL 237
Query: 239 ----------LKRLAE----------------------------KACWDIAEAKTKGDKR 260
LK E KA WD+AEAKT GD++
Sbjct: 238 LVQEYVDRNMLKHAYETIKKNNLKEEFPDIYHKCKESLLKKLAKKALWDLAEAKTHGDRQ 297
Query: 261 LLEYLVYLAMEAGYSEKVDELCERYSLEGFLKTREPEAGFVHSRFLHLKELVVEDIIWVD 320
L+EYLVYLAMEAGYSEKVDELC+RYSLEGFLK +E E+ H RFL L E VEDI+WVD
Sbjct: 298 LVEYLVYLAMEAGYSEKVDELCDRYSLEGFLKGKELES-LPHGRFLQLNEFAVEDIVWVD 356
Query: 321 EVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV 380
EVDGL A HIEGCKVVG+DCEWKPN+ KG K NKVSIMQIASD+MVFIFDLIKL EDV
Sbjct: 357 EVDGLCGATGHIEGCKVVGLDCEWKPNFEKGSKPNKVSIMQIASDKMVFIFDLIKLFEDV 416
Query: 381 PDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGG 440
PD LD+CLTRILQSP ILKLGYNFQCD KQLA SYGEL+CFKHYEMLLDIQNV +EP+GG
Sbjct: 417 PDTLDNCLTRILQSPRILKLGYNFQCDTKQLAQSYGELKCFKHYEMLLDIQNVCREPRGG 476
Query: 441 LSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSE 500
LSGLA+K+LGAGLNKTRRNSNWEQRPLSQ+QLEYAALDAVVL+ IFHH+R+ S+P D+SE
Sbjct: 477 LSGLAKKLLGAGLNKTRRNSNWEQRPLSQHQLEYAALDAVVLIHIFHHIRNHSEPADISE 536
Query: 501 GHDKIEWKSYIVSHMDNPKKSKK 523
GH+KI+WKSYIVSHMDNP+K KK
Sbjct: 537 GHEKIKWKSYIVSHMDNPQKGKK 559
>gi|224123698|ref|XP_002330186.1| predicted protein [Populus trichocarpa]
gi|222871642|gb|EEF08773.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 756 bits (1952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/552 (67%), Positives = 429/552 (77%), Gaps = 40/552 (7%)
Query: 1 MGLEERVAESCINGHKADCAWTVSVHTFSDITNISPVVFLYLLKECYIHGTCKATRKFRA 60
MG+EE V E + K D T+SVHTFSD+T SPVVFLYLLKECY HGTCKAT KFR
Sbjct: 1 MGIEEGVVELHDDKGKIDKKLTISVHTFSDLTYTSPVVFLYLLKECYAHGTCKATNKFRI 60
Query: 61 LQQQVSQALCNSPEPGPATFIVRCLYVLPIFGVYSEGFSHLIISALRRHQKTTVNSADST 120
LQQ+V AL NSP+PGPATF+V CLYVLPIFG++ EGFSHLIISALRR S D++
Sbjct: 61 LQQKVYHALENSPQPGPATFVVWCLYVLPIFGLHCEGFSHLIISALRRFLNLAPISEDTS 120
Query: 121 QAKEIAAYLFLDITGGFVDHDEKLMVKILEAFDVRLTDIEKAITQLKAQNEHRFDTAKTV 180
+AK IAA LFLDI GG VDHDE+++VKILE FDV+L D+++A+ QL Q++++ DTAKT+
Sbjct: 121 KAKVIAARLFLDIVGGLVDHDERIVVKILEVFDVKLADVDEALCQLNVQDDYKPDTAKTL 180
Query: 181 IEQYIFAMIDSQSYMTAVSLLEHFSIRQSGESFLLKMIQNKEFKAAEKWATFMGKPIL-- 238
+E YIF +IDSQSYMTA SLLEHFSIR SG+SFL+KM+QNK+ +AAEKWATFMGK +L
Sbjct: 181 VEDYIFKLIDSQSYMTAASLLEHFSIRHSGQSFLVKMMQNKQSRAAEKWATFMGKSMLCA 240
Query: 239 --------------------------------------LKRLAEKACWDIAEAKTKGDKR 260
LK+LAEKA WD+AEAKT GDK+
Sbjct: 241 LVQEYADQNMLKQAYETIKKNDLKQEFPDVYHKCKESSLKKLAEKALWDLAEAKTHGDKQ 300
Query: 261 LLEYLVYLAMEAGYSEKVDELCERYSLEGFLKTREPEAGFVHSRFLHLKELVVEDIIWVD 320
LLEYLVYLAMEA YSEKVDELCERYSLEGFL +E E + S++LHL EL VE+IIWVD
Sbjct: 301 LLEYLVYLAMEACYSEKVDELCERYSLEGFLNVKESEGSVLQSKYLHLDELAVENIIWVD 360
Query: 321 EVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV 380
EVDGL AI HIEGCKVVG+DCEWKPNYVKG K NKVSIMQIASD+ VFIFDLIKL ED+
Sbjct: 361 EVDGLCAAISHIEGCKVVGLDCEWKPNYVKGSKPNKVSIMQIASDKTVFIFDLIKLFEDI 420
Query: 381 PDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGG 440
PD+LD+CL+RILQSP ILKLGYNFQCDIKQLAHSYGEL CF +YE LLDIQNVFK+ +GG
Sbjct: 421 PDILDNCLSRILQSPRILKLGYNFQCDIKQLAHSYGELRCFNNYEKLLDIQNVFKDARGG 480
Query: 441 LSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSE 500
LSGLAEKILG GLNKTRRNSNWE RPL NQLEYAALDA VL+ IFHH + SQ +
Sbjct: 481 LSGLAEKILGTGLNKTRRNSNWELRPLGHNQLEYAALDAAVLVHIFHHFHNHSQSAGFPD 540
Query: 501 GHDKIEWKSYIV 512
GHDKIEWKS+IV
Sbjct: 541 GHDKIEWKSHIV 552
>gi|225450638|ref|XP_002278277.1| PREDICTED: uncharacterized protein LOC100254615 [Vitis vinifera]
gi|296089752|emb|CBI39571.3| unnamed protein product [Vitis vinifera]
Length = 586
Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/557 (60%), Positives = 412/557 (73%), Gaps = 43/557 (7%)
Query: 1 MGLEERVAESCINGHKADCAWTVSVHTFSDITNISPVVFLYLLKECYIHGTCKATRKFRA 60
MGLEE V E N K AWT+ +H++SD++ +SPVVFLYLLKECY +GTC AT KF A
Sbjct: 1 MGLEETVTELHNNKDKTHQAWTICMHSYSDLSCVSPVVFLYLLKECYAYGTCTATAKFHA 60
Query: 61 LQQQVSQALCNSPEPGPATFIVRCLYVLPIFGVYSEGFSHLIISALRRHQKTTVNSADST 120
LQQ+V Q L N+P+PGPA FI CLYVLP+FG YSEGFSHL+IS LRR K+ + D
Sbjct: 61 LQQRVQQVLHNTPQPGPAIFIAHCLYVLPLFGSYSEGFSHLVISGLRRFLKSGSSQEDLL 120
Query: 121 QAKEIAAYLFLDITGGFVDHDEKLMVKILEAFDVRLTDIEKAITQLKAQNEHRFDTAKTV 180
+A+ +AA LFLDI GFV+HDE++++K+LE FDV+LT+IEK I +N+ D AK
Sbjct: 121 EARNVAAQLFLDIVAGFVNHDERIVIKVLEVFDVKLTNIEKVIGNSAMKNDSVLDAAKKF 180
Query: 181 IEQYIFAMIDSQSYMTAVSLLEHFSIRQSGESFLLKMIQNKEFKAAEKWATFMGKPIL-- 238
+E YI ++DS+SYMTAV+L++ FSI+ +G+ FLLKM+Q ++FKAAEK+AT G +L
Sbjct: 181 VEGYIHQLMDSRSYMTAVALIQQFSIQTAGQPFLLKMLQTRQFKAAEKYATHKGMDMLCL 240
Query: 239 --------------------------------------LKRLAEKACWDIAEAKTKGDKR 260
LK+LAEK CWDIAE KT D++
Sbjct: 241 LVQEYVNMNMLKDAYDVIKKNNLRQEFPDIYHKCKESSLKKLAEKGCWDIAEVKTNSDRQ 300
Query: 261 LLEYLVYLAMEAGYSEKVDELCERYSLEGFLKTREPEAGFVHSRFLHLKELVVEDIIWVD 320
L+EYLVYLAMEAGY+EKVDELC+RYSLEGF+K +E E + R+L++ ELVVE IIWVD
Sbjct: 301 LIEYLVYLAMEAGYTEKVDELCDRYSLEGFVKAKEAEISPLSCRYLNINELVVEGIIWVD 360
Query: 321 EVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV 380
EV+GLH A C+IEGCKV+GIDCEWKPNY KG K NKVSI+Q+AS++ FIFDLIKLA DV
Sbjct: 361 EVNGLHNASCYIEGCKVLGIDCEWKPNYEKGSKPNKVSILQVASEKRAFIFDLIKLATDV 420
Query: 381 PDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGG 440
PDVLD+CL IL S ILKLGYNFQCD+ QL SYGEL+CFKH+EMLLDIQN+FKEP+GG
Sbjct: 421 PDVLDNCLISILHSSRILKLGYNFQCDVNQLTQSYGELKCFKHFEMLLDIQNMFKEPRGG 480
Query: 441 LSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSE 500
LSGLA+K+LGAGLNKTRRNSNWEQRPLSQ+QLEYAALDA VL+ IF S T E
Sbjct: 481 LSGLAKKVLGAGLNKTRRNSNWEQRPLSQHQLEYAALDAAVLVHIF---SKGSPATTFPE 537
Query: 501 GHDKIEWKSYIVSHMDN 517
G K EWKSYIV+HMDN
Sbjct: 538 GQAKNEWKSYIVAHMDN 554
>gi|449520229|ref|XP_004167136.1| PREDICTED: uncharacterized LOC101205010 [Cucumis sativus]
Length = 580
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/560 (59%), Positives = 415/560 (74%), Gaps = 44/560 (7%)
Query: 1 MGLEERVAESCINGHKADCAWTVSVHTFSDITNISPVVFLYLLKECYIHGTCKATRKFRA 60
MG ++ VAE + AW ++VH+ SD++ ISPVVFLYLLKECYI GT KAT+KFR
Sbjct: 1 MGFDQTVAEPLDPIDQTHLAWKITVHSLSDLSYISPVVFLYLLKECYIRGTLKATKKFRF 60
Query: 61 LQQQVSQALCNSPEPGPATFIVRCLYVLPIFGVYSEGFSHLIISALRRHQKTTVNSADST 120
LQQQV L N P+PGPATF++RCLYVLPIFG+YSEGFSHLI SAL+R K + AD
Sbjct: 61 LQQQVHLVLHNGPQPGPATFVIRCLYVLPIFGLYSEGFSHLITSALQRFLKVVITPADLD 120
Query: 121 QAKEIAAYLFLDITGGFVDHDEKLMVKILEAFDVRLTDIEKAITQLKAQNEHRFDTAKTV 180
+AK++AA LF+DI GGF+ HD++++VKI++ FDV+L+D+EK + + KA+N D+AK
Sbjct: 121 EAKDLAAQLFIDIVGGFIAHDDRIVVKIIQIFDVQLSDVEKVMFESKARNRCSSDSAKDF 180
Query: 181 IEQYIFAMIDSQSYMTAVSLLEHFSIRQSGESFLLKMIQNKEFKAAEKWATFMGKPIL-- 238
+EQY+ ++++Q Y TAV +LEHFSI QSG+S L M+QN EFKAAEKWATFMGK +L
Sbjct: 181 VEQYVSELLETQGYATAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGKQMLHL 240
Query: 239 --------------------------------------LKRLAEKACWDIAEAKTKGDKR 260
LK LAEK CWD+AEAK +++
Sbjct: 241 LVQELINRNKLKSAYGVIKKNDLQKEFPDVYQKCKESSLKNLAEKGCWDVAEAKANNNRQ 300
Query: 261 LLEYLVYLAMEAGYSEKVDELCERYSLEGFLKTREPEAGF---VHSRFLHLKELVVEDII 317
LEYLVYLA+EAGY EKVDELC RYSL GFL +E E + + + +L L +L+ +I+
Sbjct: 301 FLEYLVYLALEAGYFEKVDELCTRYSLTGFLNIKEREGSYEQKLPNHYLDLNQLIDGNIL 360
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
W+D D LH+A CHIE CKVVGIDCEWKPNY+KG K NKVSIMQIAS++M FIFDLIKL
Sbjct: 361 WIDNADALHRATCHIEECKVVGIDCEWKPNYIKGKKPNKVSIMQIASEKMAFIFDLIKLY 420
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEP 437
+DVPD+LD+CLTRILQS ILKLGYNF CD+KQL+HSY L+CFKHYEMLLDIQN+F +
Sbjct: 421 DDVPDILDNCLTRILQSSSILKLGYNFLCDVKQLSHSYESLKCFKHYEMLLDIQNIF-DH 479
Query: 438 KGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
GGLSGLA+K+LGAGLNKTRRNS+WEQRPL+ NQLEYAALDAVVL+ IF HVR SQP+
Sbjct: 480 SGGLSGLAQKVLGAGLNKTRRNSDWEQRPLTVNQLEYAALDAVVLVHIFQHVRDQSQPST 539
Query: 498 VSEGHDKIEWKSYIVSHMDN 517
+EG ++E KS+IVSHMDN
Sbjct: 540 TTEGETRLERKSFIVSHMDN 559
>gi|449435970|ref|XP_004135767.1| PREDICTED: uncharacterized protein LOC101205010 [Cucumis sativus]
Length = 580
Score = 694 bits (1791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/560 (59%), Positives = 415/560 (74%), Gaps = 44/560 (7%)
Query: 1 MGLEERVAESCINGHKADCAWTVSVHTFSDITNISPVVFLYLLKECYIHGTCKATRKFRA 60
MG ++ VAE + AW ++VH+ SD++ ISPVVFLYLLKECYI GT KAT+KFR
Sbjct: 1 MGFDQTVAEPLDPIDQTHLAWKITVHSLSDLSYISPVVFLYLLKECYIRGTLKATKKFRF 60
Query: 61 LQQQVSQALCNSPEPGPATFIVRCLYVLPIFGVYSEGFSHLIISALRRHQKTTVNSADST 120
LQQQV L N P+PGPATF++RCLYVLPIFG+YSEGFSHLI SAL+R K + AD
Sbjct: 61 LQQQVHLVLHNGPQPGPATFVIRCLYVLPIFGLYSEGFSHLITSALQRFLKVVITPADLD 120
Query: 121 QAKEIAAYLFLDITGGFVDHDEKLMVKILEAFDVRLTDIEKAITQLKAQNEHRFDTAKTV 180
+AK++AA LF+DI GGF+ HD++++VKI++ FDV+L+D+EK + + KA+N D+AK
Sbjct: 121 EAKDLAAQLFIDIVGGFIAHDDRIVVKIIQIFDVQLSDVEKVMFESKARNRCSSDSAKDF 180
Query: 181 IEQYIFAMIDSQSYMTAVSLLEHFSIRQSGESFLLKMIQNKEFKAAEKWATFMGKPIL-- 238
+EQY+ ++++Q Y TAV +LEHFSI QSG+S L M+QN EFKAAEKWATFMGK +L
Sbjct: 181 VEQYVSELLETQGYATAVDVLEHFSIHQSGQSLLYGMLQNNEFKAAEKWATFMGKQMLHL 240
Query: 239 --------------------------------------LKRLAEKACWDIAEAKTKGDKR 260
LK LAEK CWD+AEAK +++
Sbjct: 241 LVQELINRNKLKSAYGVIKKNDLQKEFPDVYQKCKESSLKNLAEKGCWDVAEAKANNNRQ 300
Query: 261 LLEYLVYLAMEAGYSEKVDELCERYSLEGFLKTREPEAGF---VHSRFLHLKELVVEDII 317
LEYLVYLA+EAGY EKVDELC RYSL GFL +E E + + + +L L +L+ +I+
Sbjct: 301 FLEYLVYLALEAGYFEKVDELCTRYSLTGFLNIKEREGSYEQKLPNHYLDLNQLIDGNIL 360
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
W+D D LH+A CHIE CKVVGIDCEWKPNY+KG K NKVSIMQIAS++M FIFDLIKL
Sbjct: 361 WIDNADALHRATCHIEECKVVGIDCEWKPNYIKGKKPNKVSIMQIASEKMAFIFDLIKLY 420
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEP 437
+DVPD+LD+CLTRILQS ILKLGYNF CD+KQL+HSY L+CFKHYEMLLDIQN+F +
Sbjct: 421 DDVPDILDNCLTRILQSSSILKLGYNFLCDVKQLSHSYESLKCFKHYEMLLDIQNIF-DH 479
Query: 438 KGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
GGLSGLA+K+LGAGLNKTRRNS+WEQRPL+ NQLEYAALDAVVL+ IF HVR SQP+
Sbjct: 480 SGGLSGLAQKVLGAGLNKTRRNSDWEQRPLTVNQLEYAALDAVVLVHIFQHVRDQSQPST 539
Query: 498 VSEGHDKIEWKSYIVSHMDN 517
+EG ++E KS+IVSHMDN
Sbjct: 540 TTEGETRLERKSFIVSHMDN 559
>gi|356576837|ref|XP_003556536.1| PREDICTED: uncharacterized protein LOC100797818 [Glycine max]
Length = 571
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/564 (59%), Positives = 418/564 (74%), Gaps = 49/564 (8%)
Query: 1 MGLEERVAESCINGHKADCAWTVSVHTFSDITNISPVVFLYLLKECYIHGTCKATRKFRA 60
MGLEE VA++ A T+ H F D+T++SPVVFL+LLK+CY +GTCKAT KFRA
Sbjct: 1 MGLEENVAKTSTTKDDASQMLTLCTHAFYDLTHVSPVVFLFLLKKCYYYGTCKATAKFRA 60
Query: 61 LQQQVSQALCNSPEPGPATFIVRCLYVLPIFGVYSEGFSHLIISALRRH-QKTTVNSADS 119
LQ QV L N P+PGPATFIV+C+YV P+F +S+GF+HLIISALRR +++T+ + DS
Sbjct: 61 LQHQVHLVLHNDPKPGPATFIVQCMYVSPLFEDHSQGFTHLIISALRRFLKRSTITTEDS 120
Query: 120 TQAKEIAAYLFLDITGGFVDHDEKLMVKILEAFDVRLTDIEKAITQLKAQNEHRFDTAKT 179
+ K++ A+L +DI G + HDEK+++K+LE FDV+LT++EKA+ Q+K ++E + TA
Sbjct: 121 LEVKDLVAHLLVDIIRGQIHHDEKIVMKLLEIFDVKLTNVEKAMCQIKEKHELSYGTANE 180
Query: 180 VIEQYIFAMIDSQSYMTAVSLLEHFSIRQSGESFLLKMIQNKEFKAAEKWATFMGKPIL- 238
+EQYI ++ SQ YMTAV+L+E FSI Q G+SFLL MIQ+ +FKAAEKWATFMGKP+L
Sbjct: 181 FVEQYIVELVKSQFYMTAVTLIEQFSIHQYGQSFLLDMIQSNQFKAAEKWATFMGKPMLS 240
Query: 239 ---------------------------------------LKRLAEKACWDIAEAKTKGDK 259
LK LAEK CWD+AEA+T D+
Sbjct: 241 TLVEEFIERNMLKNAYEIIKKNNLKQDFPDVYKRCKESSLKNLAEKGCWDVAEARTNNDR 300
Query: 260 RLLEYLVYLAMEAGYSEKVDELCERYSLEGFLKTREPEAGFVHSRFLHLKELVVEDIIWV 319
+L+EYLVYLA+EAGY EKVDELC+RY L+ FL + PE + R+LHL EL+V+ IIWV
Sbjct: 301 QLMEYLVYLALEAGYMEKVDELCDRYCLDRFLDIKVPETSNLQGRYLHLDELLVDSIIWV 360
Query: 320 DEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAED 379
DEV+GL A HI+G KV+G+DCEWKPNYVKG K NKVSIMQIAS++MVFIFDLIKL ++
Sbjct: 361 DEVEGLLDATRHIKGFKVIGLDCEWKPNYVKGSKPNKVSIMQIASEKMVFIFDLIKLHKE 420
Query: 380 VPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKG 439
VPD+LD CL+ IL SP ILKLGYNFQCD KQLA+SY EL CFK+YEMLLDIQNVFKEP+G
Sbjct: 421 VPDILDDCLSCILLSPRILKLGYNFQCDAKQLAYSYEELRCFKNYEMLLDIQNVFKEPRG 480
Query: 440 GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVS 499
GL+GLAEKILGA LNKTRRNSNWEQRPL+ NQLEYAALDAVVL+ IFHH+
Sbjct: 481 GLAGLAEKILGASLNKTRRNSNWEQRPLTPNQLEYAALDAVVLVHIFHHLP--------G 532
Query: 500 EGHDKIEWKSYIVSHMDNPKKSKK 523
+GHDK EWKS IVSH +N KK KK
Sbjct: 533 QGHDKSEWKSCIVSHTENAKKFKK 556
>gi|356535024|ref|XP_003536049.1| PREDICTED: uncharacterized protein LOC100788595 [Glycine max]
Length = 566
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/566 (58%), Positives = 411/566 (72%), Gaps = 51/566 (9%)
Query: 1 MGLEERVAESCINGHKADCAWTVSVHTFSDITNISPVVFLYLLKECYIHGTCKATRKFRA 60
M L+E VA++ A WT+ H F D+T++SPVVFL+LLKECY +GTCKA+ KFRA
Sbjct: 1 MSLKENVAKTGNTEDNASQMWTLCKHAFYDLTHVSPVVFLFLLKECYYYGTCKASTKFRA 60
Query: 61 LQQQVSQALCNSPEPGPATFIVRCLYVLPIFGVYSEGFSHLIISALRRH-QKTTVNSADS 119
LQ QV L N P+P PATFIV+C+YV P+F +S+GF+HLIISALRR +++T + DS
Sbjct: 61 LQHQVHLVLSNDPKPEPATFIVQCMYVSPLFEDHSQGFTHLIISALRRFLKRSTTTTEDS 120
Query: 120 TQAKEIAAYLFLDITGGFVDHDEKLMVKILEAFDVRLTDIEKAITQLKAQNEHRFDTAKT 179
+ K++ A+L +DI G +DHDEK+++K+LE FDV+LT++EKA+ Q+K +++ TAK
Sbjct: 121 LEVKDLVAHLLVDIIWGQIDHDEKIVLKLLEIFDVKLTNVEKAMCQIKEKHDLSCGTAKE 180
Query: 180 VIEQYIFAMIDSQSYMTAVSLLEHFSIRQSGESFLLKMIQNKEFKAAEKWATFMGKPIL- 238
+EQYI ++ SQ YMTAV+L+E FS+ Q G+SFLL MIQ+ +FKAAEKWATFMGK +L
Sbjct: 181 FVEQYIVELVKSQLYMTAVTLIEQFSVYQYGQSFLLDMIQSNQFKAAEKWATFMGKQMLS 240
Query: 239 ---------------------------------------LKRLAEKACWDIAEAKTKGDK 259
LK LAEK CW++AEA+ D+
Sbjct: 241 TLVEEFIERNMLKNAHEIIKKNNLKQDFPDVYKRCKESSLKNLAEKGCWEVAEARINNDR 300
Query: 260 RLLEYLVYLAMEAGYSEKVDELCERYSLEGFLKTREPEAGFVHSRFLHLKELVVEDIIWV 319
+L+EYLVYLAMEAGY EKVDELC+RYSL FL PE + +L+L EL+VE IIWV
Sbjct: 301 QLMEYLVYLAMEAGYMEKVDELCDRYSLSRFLDINVPETSNLQGHYLNLDELLVESIIWV 360
Query: 320 DEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAED 379
DEV+GL A HIEG KV+G+DCEWKPNY+KG K NKVSIMQIAS++ FIFDLIKL ++
Sbjct: 361 DEVEGLLDATRHIEGFKVIGLDCEWKPNYIKGSKPNKVSIMQIASEDSAFIFDLIKLHKE 420
Query: 380 VPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKG 439
VPD+LD+CL+RIL SP ILKLGYNFQCD KQLA+SY EL CFK+YEMLLDIQNVFKEP+G
Sbjct: 421 VPDILDNCLSRILLSPRILKLGYNFQCDAKQLAYSYEELRCFKNYEMLLDIQNVFKEPRG 480
Query: 440 GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVS 499
GL+GL EKILGA LNKTRRNSNWEQRPL+ +QLEYAALDAVVL+ IF H+ C
Sbjct: 481 GLAGLTEKILGASLNKTRRNSNWEQRPLTPHQLEYAALDAVVLVHIFRHL-PC------- 532
Query: 500 EGH--DKIEWKSYIVSHMDNPKKSKK 523
+GH DK EWKS IVS +N KK KK
Sbjct: 533 QGHNKDKSEWKSCIVSLTENAKKFKK 558
>gi|388502398|gb|AFK39265.1| unknown [Medicago truncatula]
Length = 553
Score = 625 bits (1613), Expect = e-176, Method: Compositional matrix adjust.
Identities = 324/557 (58%), Positives = 391/557 (70%), Gaps = 60/557 (10%)
Query: 1 MGLEERVAESCINGHKADCAWTVSVHTFSDITNISPVVFLYLLKECYIHGTCKATRKFRA 60
MGLEE VAE KA WT+ HTF D++N+SPVVF+++LKECY HG CKAT KFRA
Sbjct: 1 MGLEENVAEV---DDKA--RWTLCKHTFYDLSNVSPVVFMFMLKECYYHGNCKATVKFRA 55
Query: 61 LQQQVSQALCNSPEPGPATFIVRCLYVLPIFGVYSEGFSHLIISALRR---HQKTTVNSA 117
LQ+Q+ L N P+PGPATFIV+CLYV P+F S+GF+HL+IS+ RR K T+ +
Sbjct: 56 LQEQLCLVLHNDPKPGPATFIVQCLYVSPVFDNQSQGFTHLVISSFRRFLKRSKPTI-TE 114
Query: 118 DSTQAKEIAAYLFLDITGGFVDHDEKLMVKILEAFDVRLTDIEKAITQLKAQNEHRFDTA 177
DS K AAYL ++I G + HDE +++KILE FDV+L ++EKA+ Q K ++ A
Sbjct: 115 DSLDIKNSAAYLLVNIIRGQIKHDEMIVMKILETFDVKLPNVEKALCQNKEKDYLSCGKA 174
Query: 178 KTVIEQYIFAMIDSQSYMTAVSLLEHFSIRQSGESFLLKMIQNKEFKAAEKWATFMGKPI 237
+ +IEQY F ++ SQ Y AV+L+EHFSI G+SFLL MI++ +FKAAEKWATFMGKP+
Sbjct: 175 QELIEQYTFELVKSQLYTIAVTLMEHFSISHYGQSFLLDMIKSNQFKAAEKWATFMGKPM 234
Query: 238 L----------------------------------------LKRLAEKACWDIAEAKTKG 257
L LK LAEK CWD+AEA+
Sbjct: 235 LSILIEEFVQRNMLNDAYQIIKKNNLKQDFPDVYKRCKESSLKSLAEKGCWDVAEARINN 294
Query: 258 DKRLLEYLVYLAMEAGYSEKVDELCERYSLEGFLKTREPEAGFVHSRFLHLKELVVEDII 317
D++L+EYLVYLAMEAGY EKVDELCERYSL+ FL + E +LHL+EL+VEDII
Sbjct: 295 DRQLMEYLVYLAMEAGYMEKVDELCERYSLDRFLDIKVLETSIPQGNYLHLEELMVEDII 354
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
WVD+V+GL A C IE KV+G+DCEWKPNYVKG K NKVSIMQIAS++ FI DLIKL
Sbjct: 355 WVDDVEGLLDATCQIEDAKVIGLDCEWKPNYVKGSKPNKVSIMQIASEKKAFILDLIKLH 414
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEP 437
+VP+ LDSCLTRIL SPGILKLGYNFQCDIKQLAHSY ELECFK Y+ LLDIQ VFK+P
Sbjct: 415 REVPERLDSCLTRILLSPGILKLGYNFQCDIKQLAHSYEELECFKKYKRLLDIQKVFKDP 474
Query: 438 KGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
+GGL+ LAEKILGAGLNKTRRNS+WEQRPL+ NQLEYAALDAVVL+ IF P
Sbjct: 475 RGGLAKLAEKILGAGLNKTRRNSDWEQRPLTPNQLEYAALDAVVLVHIF--------PQL 526
Query: 498 VSEGHDKIEWKSYIVSH 514
+G EWKS I SH
Sbjct: 527 PDQGD---EWKSCIESH 540
>gi|357441841|ref|XP_003591198.1| hypothetical protein MTR_1g083820 [Medicago truncatula]
gi|355480246|gb|AES61449.1| hypothetical protein MTR_1g083820 [Medicago truncatula]
Length = 553
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 322/556 (57%), Positives = 390/556 (70%), Gaps = 58/556 (10%)
Query: 1 MGLEERVAESCINGHKADCAWTVSVHTFSDITNISPVVFLYLLKECYIHGTCKATRKFRA 60
MGLEE VAE KA WT+ HTF D++N+SPVVF+++LKECY HG CKAT KFRA
Sbjct: 1 MGLEENVAEV---DDKA--RWTLCKHTFYDLSNVSPVVFMFMLKECYYHGNCKATVKFRA 55
Query: 61 LQQQVSQALCNSPEPGPATFIVRCLYVLPIFGVYSEGFSHLIISALRRHQKTT--VNSAD 118
LQ+Q+ L N P+PGPATFIV+CLYV P+F S+GF+HL+IS+ RR K + + D
Sbjct: 56 LQEQLCLVLHNDPKPGPATFIVQCLYVSPVFDNQSQGFTHLVISSFRRFLKRSKPTITED 115
Query: 119 STQAKEIAAYLFLDITGGFVDHDEKLMVKILEAFDVRLTDIEKAITQLKAQNEHRFDTAK 178
S K AAYL ++I G + HDE +++KILE FDV+L ++EKA+ Q K ++ A+
Sbjct: 116 SLDIKNSAAYLLVNIIRGQIKHDEMIVMKILETFDVKLPNVEKALCQNKEKDYLSCGKAQ 175
Query: 179 TVIEQYIFAMIDSQSYMTAVSLLEHFSIRQSGESFLLKMIQNKEFKAAEKWATFMGKPIL 238
+IEQY F ++ SQ Y AV+L+EHFSI G+SFLL MI++ +FKAAEKWATFMGKP+L
Sbjct: 176 ELIEQYTFELVKSQLYTIAVTLMEHFSISHYGQSFLLDMIKSNQFKAAEKWATFMGKPML 235
Query: 239 ----------------------------------------LKRLAEKACWDIAEAKTKGD 258
LK LAEK CWD+AEA+ D
Sbjct: 236 SILIEEFVQRNMLNDAYQIIKKNNLKQDFPDVYKRCKESSLKSLAEKGCWDVAEARINND 295
Query: 259 KRLLEYLVYLAMEAGYSEKVDELCERYSLEGFLKTREPEAGFVHSRFLHLKELVVEDIIW 318
++L+EYLVYLAMEAGY EKVDELCERYSL+ FL + E +LHL+EL+VEDIIW
Sbjct: 296 RQLMEYLVYLAMEAGYMEKVDELCERYSLDRFLDIKVLETSIPQGNYLHLEELMVEDIIW 355
Query: 319 VDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAE 378
VD+V+GL A C IE KV+G+DCEWKPNYVKG K NKVSIMQIAS++ FI DLIKL
Sbjct: 356 VDDVEGLLDATCQIEDAKVIGLDCEWKPNYVKGSKPNKVSIMQIASEKKAFILDLIKLHR 415
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPK 438
+VP+ LDSCLTRIL SPGILKLGYNFQCDIKQLAHSY ELECFK Y+ LLDIQ VFK+P+
Sbjct: 416 EVPERLDSCLTRILLSPGILKLGYNFQCDIKQLAHSYEELECFKKYKRLLDIQKVFKDPR 475
Query: 439 GGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDV 498
GGL+ LAEKILGAGLNKTRRNS+WEQRPL+ NQLEYAALDAVVL+ IF +
Sbjct: 476 GGLAKLAEKILGAGLNKTRRNSDWEQRPLTPNQLEYAALDAVVLVHIFRQLP-------- 527
Query: 499 SEGHDKIEWKSYIVSH 514
+G EWKS I SH
Sbjct: 528 DQGD---EWKSCIESH 540
>gi|334183377|ref|NP_176027.2| 3'-5' exonuclease domain-containing protein [Arabidopsis thaliana]
gi|332195255|gb|AEE33376.1| 3'-5' exonuclease domain-containing protein [Arabidopsis thaliana]
Length = 589
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 327/579 (56%), Positives = 406/579 (70%), Gaps = 46/579 (7%)
Query: 1 MGLEERVAESCINGHKADCAWTVSVHTFSDITNISPVVFLYLLKECYIHGTCKATRKFRA 60
MGL+ + A+ + + A TV +H FSD+T +SPVVFLYLLKECY HG+ KAT+KF+A
Sbjct: 1 MGLDSKEADLEVIRDEKSEANTVCLHAFSDLTYVSPVVFLYLLKECYKHGSLKATKKFQA 60
Query: 61 LQQQVSQALCNSPEPGPATFIVRCLYVLPIFGVYSEGFSHLIISALRRHQKTT---VNSA 117
LQ QV + L N P+PGPATFI+ CL +LP+FGVY EGFSHL+ISALRR KT +
Sbjct: 61 LQYQVHRVLANKPQPGPATFIINCLTLLPLFGVYGEGFSHLVISALRRFFKTVSEPTSEE 120
Query: 118 DSTQAKEIAAYLFLDITGGFVDHDEKLMVKILEAFDVRLTDIEKAITQLKAQNEHRFDTA 177
D A+++AA FL GG + +DEK+MV L FDVRLT I++A++ + + F
Sbjct: 121 DICLARKLAAQFFLATVGGSLTYDEKVMVHTLRVFDVRLTSIDEALSISEVWQRYGFACG 180
Query: 178 KTVIEQYIFAMIDSQSYMTAVSLLEHFSIRQSGESFLLKMIQNKEFKAAEKWATFMGKPI 237
+EQYI +I S+S+MTAV+LLEHFS R GE+FL +M+++K F+AAE+WATFMG+P
Sbjct: 181 NAFLEQYISDLIKSKSFMTAVTLLEHFSFRFPGETFLQQMVEDKNFQAAERWATFMGRPS 240
Query: 238 L----------------------------------------LKRLAEKACWDIAEAKTKG 257
L LK LAEKACWD+AE KTKG
Sbjct: 241 LCILVQEYGSRNMLKQAYNIINKNYLQHDFPELYHKCKESALKVLAEKACWDVAEIKTKG 300
Query: 258 DKRLLEYLVYLAMEAGYSEKVDELCERYSLEGFLKTREPEAGFVHSRFLHLKELVVEDII 317
D++LL+YLVYLA+EAGY EKVDELC+RYSL+G K RE E FV FL L +L VED++
Sbjct: 301 DRQLLKYLVYLAVEAGYLEKVDELCDRYSLQGLPKAREAEVAFVEKSFLRLNDLAVEDVV 360
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
WVDEV+ L KA +EGC+VVGIDCEWKPNY+KG K NKVSIMQI SD +FI DLIKL
Sbjct: 361 WVDEVNELRKATSFLEGCRVVGIDCEWKPNYIKGSKQNKVSIMQIGSDTKIFILDLIKLY 420
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEP 437
D ++LD+CL+ ILQS LKLGYNFQCDIKQLA SYG+L+CF+ Y+MLLDIQNVF EP
Sbjct: 421 NDASEILDNCLSHILQSKSTLKLGYNFQCDIKQLALSYGDLKCFERYDMLLDIQNVFNEP 480
Query: 438 KGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
GGL+GL +KILG LNKTRRNS+WEQRPLSQNQLEYAALDA VL+ IF HVR P D
Sbjct: 481 FGGLAGLTKKILGVSLNKTRRNSDWEQRPLSQNQLEYAALDAAVLIHIFRHVRD-HPPHD 539
Query: 498 VSEGHDKIEWKSYIVSHMDNPKKSKKRPTIKKETESGAN 536
S + +WKS+IVSHM++PKK KK+ T++ A+
Sbjct: 540 SSS--ETTQWKSHIVSHMESPKKLKKKTPKSNPTQTSAS 576
>gi|297848138|ref|XP_002891950.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337792|gb|EFH68209.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 569
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 318/558 (56%), Positives = 398/558 (71%), Gaps = 49/558 (8%)
Query: 1 MGL--EERVAESCINGHKADCAWTVSVHTFSDITNISPVVFLYLLKECYIHGTCKATRKF 58
MGL EE I KA+ A TV +H+FSD+T +SPVVFLYLLKECY HG+ KAT+KF
Sbjct: 1 MGLDSEEEAELVVIKDEKAE-ANTVCLHSFSDLTYVSPVVFLYLLKECYKHGSLKATKKF 59
Query: 59 RALQQQVSQALCNSPEPGPATFIVRCLYVLPIFGVYSEGFSHLIISALRRHQKTT---VN 115
+ALQ +V Q L N P+PGPATFI++CL VLP+FGVY EGFSHL+ISALRR K+
Sbjct: 60 QALQYRVHQVLANKPQPGPATFIIKCLTVLPMFGVYGEGFSHLVISALRRFFKSVSEPTT 119
Query: 116 SADSTQAKEIAAYLFLDITGGFVDHDEKLMVKILEAFDVRLTDIEKAITQLKAQNEHRFD 175
D + A+++AA FL GG + +DEK+M+ L+ FDV LT I++A++ + + F
Sbjct: 120 EEDMSSARKLAAQFFLATVGGSLTYDEKVMMHTLKVFDVGLTSIDEALSVSEVWQGYGFA 179
Query: 176 TAKTVIEQYIFAMIDSQSYMTAVSLLEHFSIRQSGESFLLKMIQNKEFKAAEKWATFMGK 235
+ +EQYI +I S+S+MTAV+LLEHFS R GE+FL +M+++K+F+AAE+WATFMG+
Sbjct: 180 SGNAFLEQYISDLIKSKSFMTAVTLLEHFSFRFPGETFLQQMVEDKDFQAAERWATFMGR 239
Query: 236 PIL----------------------------------------LKRLAEKACWDIAEAKT 255
P L LK LAEKACWD+AE KT
Sbjct: 240 PSLCILVQEYGSRNMLKQAYHVINKNYLQQDFPELYHKCKESALKVLAEKACWDVAENKT 299
Query: 256 KGDKRLLEYLVYLAMEAGYSEKVDELCERYSLEGFLKTREPEAGFVHSRFLHLKELVVED 315
KGD++LL+YLVYLAMEAGY EKV+ELC+RYSL+G K +E E FV FL L +L VED
Sbjct: 300 KGDRQLLKYLVYLAMEAGYLEKVNELCDRYSLQGLRKAQEAEVAFVQKSFLRLNDLAVED 359
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
++WVDEV+ L KA +EGC+VVGIDCEWKPNY+KG K NKVSIMQI SD +FI DLIK
Sbjct: 360 VVWVDEVNELRKATSFLEGCRVVGIDCEWKPNYIKGSKQNKVSIMQIGSDTKIFILDLIK 419
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK 435
L D ++LD+CL++ILQS LKLGYNFQCD+KQLA SYG+L+CF+ Y+MLLDIQNVFK
Sbjct: 420 LYNDATEMLDNCLSQILQSKSTLKLGYNFQCDVKQLALSYGDLKCFERYDMLLDIQNVFK 479
Query: 436 EPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQP 495
EP GGL+GL +KILG LNKTRRNS+WEQRPL+QNQLEYAALDA VL+ IF HVR P
Sbjct: 480 EPFGGLAGLTKKILGVSLNKTRRNSDWEQRPLTQNQLEYAALDAAVLIHIFRHVRD-HPP 538
Query: 496 TDVSEGHDKIEWKSYIVS 513
D S + ++WKS+IVS
Sbjct: 539 HDSSS--ETVQWKSHIVS 554
>gi|12321757|gb|AAG50917.1|AC069159_18 3'-5' exonuclease, putative [Arabidopsis thaliana]
Length = 582
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 318/570 (55%), Positives = 391/570 (68%), Gaps = 60/570 (10%)
Query: 1 MGLEERVAESCINGHKADCAWTVSVHTFSDITNISPVVFLYLLKECYIHGTCKATRKFRA 60
MGL+ + A+ + + A TV +H FSD+T +SPVVFLYLLKECY HG+ KAT+KF+A
Sbjct: 1 MGLDSKEADLEVIRDEKSEANTVCLHAFSDLTYVSPVVFLYLLKECYKHGSLKATKKFQA 60
Query: 61 LQQQVSQALCNSPEPGPATFIVRCLYVLPIFGVYSEGFSHLIISALRRHQKTT---VNSA 117
LQ QV + L N P+PGPATFI+ CL +LP+FGVY EGFSHL+ISALRR KT +
Sbjct: 61 LQYQVHRVLANKPQPGPATFIINCLTLLPLFGVYGEGFSHLVISALRRFFKTVSEPTSEE 120
Query: 118 DSTQAKEIAAYLFLDITGGFVDHDEKLMVKILEAFDVRLTDIEKAITQLKAQNEHRFDTA 177
D A+++AA FL GG + +DEK+MV L FDVRLT I++A++ + + F
Sbjct: 121 DICLARKLAAQFFLATVGGSLTYDEKVMVHTLRVFDVRLTSIDEALSISEVWQRYGFACG 180
Query: 178 KTVIEQYIFAMIDSQSYMTAVSLLEHFSIRQSGESFLLKMIQNKEFKAAEKWATFMGKPI 237
+EQYI +I S+S+MTAV+LLEHFS R GE+FL +M+++K F+AAE+WATFMG+P
Sbjct: 181 NAFLEQYISDLIKSKSFMTAVTLLEHFSFRFPGETFLQQMVEDKNFQAAERWATFMGRPS 240
Query: 238 L----------------------------------------LKRLAEKACWDIAEAKTKG 257
L LK LAEKACWD+AE KTKG
Sbjct: 241 LCILVQEYGSRNMLKQAYNIINKNYLQHDFPELYHKCKESALKVLAEKACWDVAEIKTKG 300
Query: 258 DKRLLEYLVYLAMEAGYSEKVDELCERYSLEGFLKTREPEAGFVHSRFLHLKELVVEDII 317
D++LL+YLVYLA+EAGY EKVDELC+RYSL+G K RE E FV FL L +L VED++
Sbjct: 301 DRQLLKYLVYLAVEAGYLEKVDELCDRYSLQGLPKAREAEVAFVEKSFLRLNDLAVEDVV 360
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
WVDEV+ L KA +EGC+VVGIDCEWKPNY+KG K NKVSIMQI SD +FI DLIKL
Sbjct: 361 WVDEVNELRKATSFLEGCRVVGIDCEWKPNYIKGSKQNKVSIMQIGSDTKIFILDLIKLY 420
Query: 378 EDVPDVLDSCLTRILQSPGILKL--------------GYNFQCDIKQLAHSYGELECFKH 423
D ++LD+CL+ ILQS LKL GYNFQCDIKQLA SYG+L+CF+
Sbjct: 421 NDASEILDNCLSHILQSKSTLKLVSLTEDYPDHKLSSGYNFQCDIKQLALSYGDLKCFER 480
Query: 424 YEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLL 483
Y+MLLDIQNVF EP GGL+GL +KILG LNKTRRNS+WEQRPLSQNQLEYAALDA VL+
Sbjct: 481 YDMLLDIQNVFNEPFGGLAGLTKKILGVSLNKTRRNSDWEQRPLSQNQLEYAALDAAVLI 540
Query: 484 QIFHHVRSCSQPTDVSEGHDKIEWKSYIVS 513
IF HVR P D S + +WKS+IVS
Sbjct: 541 HIFRHVRD-HPPHDSSS--ETTQWKSHIVS 567
>gi|357441845|ref|XP_003591200.1| hypothetical protein MTR_1g083820 [Medicago truncatula]
gi|355480248|gb|AES61451.1| hypothetical protein MTR_1g083820 [Medicago truncatula]
Length = 519
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 301/518 (58%), Positives = 365/518 (70%), Gaps = 55/518 (10%)
Query: 40 LYLLKECYIHGTCKATRKFRALQQQVSQALCNSPEPGPATFIVRCLYVLPIFGVYSEGFS 99
+++LKECY HG CKAT KFRALQ+Q+ L N P+PGPATFIV+CLYV P+F S+GF+
Sbjct: 1 MFMLKECYYHGNCKATVKFRALQEQLCLVLHNDPKPGPATFIVQCLYVSPVFDNQSQGFT 60
Query: 100 HLIISALRR---HQKTTVNSADSTQAKEIAAYLFLDITGGFVDHDEKLMVKILEAFDVRL 156
HL+IS+ RR K T+ + DS K AAYL ++I G + HDE +++KILE FDV+L
Sbjct: 61 HLVISSFRRFLKRSKPTI-TEDSLDIKNSAAYLLVNIIRGQIKHDEMIVMKILETFDVKL 119
Query: 157 TDIEKAITQLKAQNEHRFDTAKTVIEQYIFAMIDSQSYMTAVSLLEHFSIRQSGESFLLK 216
++EKA+ Q K ++ A+ +IEQY F ++ SQ Y AV+L+EHFSI G+SFLL
Sbjct: 120 PNVEKALCQNKEKDYLSCGKAQELIEQYTFELVKSQLYTIAVTLMEHFSISHYGQSFLLD 179
Query: 217 MIQNKEFKAAEKWATFMGKPIL-------------------------------------- 238
MI++ +FKAAEKWATFMGKP+L
Sbjct: 180 MIKSNQFKAAEKWATFMGKPMLSILIEEFVQRNMLNDAYQIIKKNNLKQDFPDVYKRCKE 239
Query: 239 --LKRLAEKACWDIAEAKTKGDKRLLEYLVYLAMEAGYSEKVDELCERYSLEGFLKTREP 296
LK LAEK CWD+AEA+ D++L+EYLVYLAMEAGY EKVDELCERYSL+ FL +
Sbjct: 240 SSLKSLAEKGCWDVAEARINNDRQLMEYLVYLAMEAGYMEKVDELCERYSLDRFLDIKVL 299
Query: 297 EAGFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNK 356
E +LHL+EL+VEDIIWVD+V+GL A C IE KV+G+DCEWKPNYVKG K NK
Sbjct: 300 ETSIPQGNYLHLEELMVEDIIWVDDVEGLLDATCQIEDAKVIGLDCEWKPNYVKGSKPNK 359
Query: 357 VSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYG 416
VSIMQIAS++ FI DLIKL +VP+ LDSCLTRIL SPGILKLGYNFQCDIKQLAHSY
Sbjct: 360 VSIMQIASEKKAFILDLIKLHREVPERLDSCLTRILLSPGILKLGYNFQCDIKQLAHSYE 419
Query: 417 ELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAA 476
ELECFK Y+ LLDIQ VFK+P+GGL+ LAEKILGAGLNKTRRNS+WEQRPL+ NQLEYAA
Sbjct: 420 ELECFKKYKRLLDIQKVFKDPRGGLAKLAEKILGAGLNKTRRNSDWEQRPLTPNQLEYAA 479
Query: 477 LDAVVLLQIFHHVRSCSQPTDVSEGHDKIEWKSYIVSH 514
LDAVVL+ IF + +G EWKS I SH
Sbjct: 480 LDAVVLVHIFRQLP--------DQGD---EWKSCIESH 506
>gi|326508692|dbj|BAJ95868.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 562
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 288/564 (51%), Positives = 388/564 (68%), Gaps = 48/564 (8%)
Query: 1 MG-LEERVAESCINGHKADCAWTVSVHTFSDITNISPVVFLYLLKECYIHGTCKATRKFR 59
MG L+ R E+C + K + ++ +H+FSD++++S F+YLLK+CY +GT KAT KFR
Sbjct: 1 MGRLKARAQEACESNQKNE-HRSICLHSFSDLSHVSAATFMYLLKDCYFYGTLKATAKFR 59
Query: 60 ALQQQVSQALCNSPEPGPATFIVRCLYVLPIFG-VYSEGFSHLIISALRRHQKTTVNSAD 118
LQQQV +AL N+P+PGP T+IV+C+Y++P+ G ++EGFSH++IS+LR + D
Sbjct: 60 ILQQQVKRALNNAPQPGPFTYIVQCMYIIPLLGQSHAEGFSHMLISSLRHLKSVESVQKD 119
Query: 119 STQAKEIAAYLFLDITGGFVDHDEKLMVKILEAFDVRLTDIEKAITQLKAQNEHRFDTAK 178
AK +AA L LDI V H+E+++VK+LE FD+ L D+ A+ + +E A+
Sbjct: 120 FIDAKCLAARLVLDILASVVPHEERILVKLLETFDIELKDMAHALCGSELGDED-LAAAR 178
Query: 179 TVIEQYIFAMIDSQSYMTAVSLLEHFSIRQSGESFLLKMIQNKEFKAAEKWATFMGKPIL 238
++Q++ + S+SY+TAV+L+ FSI+ E FL+++I +K++KAAE+WA FMGK ++
Sbjct: 179 EHLKQHVQCFMQSESYVTAVALITRFSIQCCDEKFLIELIGSKQYKAAEEWAAFMGKEMI 238
Query: 239 ----------------------------------------LKRLAEKACWDIAEAKTKGD 258
LK+LAEK CWD+AE + K D
Sbjct: 239 ILIIQKYVDVKMLKSANALVKQYDLAEEFPDVNYLYKESSLKKLAEKGCWDVAEVRAKKD 298
Query: 259 KRLLEYLVYLAMEAGYSEKVDELCERYSLEGFLKTREPEAGFVHSRFLHLKELVVEDIIW 318
+L+EYLVYLAMEAGY EKVDELCERYSLEG++ + PE S +L LK+L++E+I+W
Sbjct: 299 TKLMEYLVYLAMEAGYIEKVDELCERYSLEGYVNSLVPEEVMCQSDYLELKKLILEEIVW 358
Query: 319 VDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAE 378
VDEV GL A +IE CK++G+DCEWKPNY KG + NKV+I+QIASD+ FIFDLIKL E
Sbjct: 359 VDEVKGLLSATSYIEACKIIGVDCEWKPNYEKGSRPNKVAIIQIASDKKAFIFDLIKLYE 418
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPK 438
D P LD C RI+ S ILKLGYN QCD+ QL SYGEL CF+ YEMLLDIQ +FKE
Sbjct: 419 DDPKALDCCFRRIMCSSNILKLGYNLQCDLHQLTQSYGELLCFQSYEMLLDIQKLFKETT 478
Query: 439 GGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPT-D 497
GGLSGL++KILGAGLNKTRRNS+WEQRPLSQNQ EYAALDA VL+ IFHHVR QP
Sbjct: 479 GGLSGLSKKILGAGLNKTRRNSDWEQRPLSQNQKEYAALDAAVLVHIFHHVR--GQPQFG 536
Query: 498 VSEGHDKIEWKSYIVSHMDNPKKS 521
V+EG + +EW+S+IVS ++ + +
Sbjct: 537 VNEGRE-VEWRSHIVSRVNRARST 559
>gi|115463391|ref|NP_001055295.1| Os05g0357100 [Oryza sativa Japonica Group]
gi|55168078|gb|AAV43946.1| unknown protein [Oryza sativa Japonica Group]
gi|113578846|dbj|BAF17209.1| Os05g0357100 [Oryza sativa Japonica Group]
gi|215716995|dbj|BAG95358.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218196622|gb|EEC79049.1| hypothetical protein OsI_19612 [Oryza sativa Indica Group]
gi|222631262|gb|EEE63394.1| hypothetical protein OsJ_18206 [Oryza sativa Japonica Group]
Length = 580
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 285/560 (50%), Positives = 381/560 (68%), Gaps = 64/560 (11%)
Query: 22 TVSVHTFSDITNISPVVFLYLLKECYIHGTCKATRKFRALQQQVSQALCNSPEPGPATFI 81
++ +H+FSD++++S F+YLLK+CY++GT KAT KF+ LQ QV + L N P+PGP T++
Sbjct: 22 SLCLHSFSDLSHVSAATFMYLLKDCYLYGTDKATPKFKILQLQVKRVLNNDPQPGPFTYV 81
Query: 82 VRCLYVLPIFG-VYSEGFSHLIISALRRHQKTTVNSADSTQAKEIAAYLFLDITGGFVDH 140
V+C+Y++P+ G ++EGFSH++IS+LR + D AK +AA L LDI V H
Sbjct: 82 VQCMYIVPLLGKTHAEGFSHMLISSLRHLKSVESVQKDFLDAKHLAARLILDIVASIVPH 141
Query: 141 DEKLMVKILEAFDVRLTDIEKAITQLKAQNEHRFDTAKTVIEQYIFAMIDSQSYMTAVSL 200
+E++++K+LEA+D+ L D+ A+ + +E AK ++QY+ +++S+SY+TAV+L
Sbjct: 142 EERILIKLLEAYDIELRDMADALYGSELGDED-LVKAKEHLKQYVQCLMESESYVTAVNL 200
Query: 201 LEHFSIRQSGESFLLKMIQNKEFKAAEKWATFMGKPIL---------------------- 238
+ FSI+ ESFL K+I+N +AAEKWA FMG ++
Sbjct: 201 ITRFSIQCYDESFLTKLIENNHLEAAEKWAVFMGNEMICLIIQTYLDIKMLKRANELVKQ 260
Query: 239 ------------------LKRLAEKACWDIAEAKTKGDKRLLEYLVYLAMEAGYSEKVDE 280
LK+LAEK CWDIAE + K + +L+EYLVYLAMEAGY EKV+E
Sbjct: 261 HDLTEKFPDVNYLYKESVLKKLAEKGCWDIAEVRAKKETKLMEYLVYLAMEAGYMEKVEE 320
Query: 281 LCERYSLEGFLKT------------------REPEAGFVHSRFLHLKELVVEDIIWVDEV 322
LC+RYSLEG++ + PE S +L LKEL++EDIIWVDE+
Sbjct: 321 LCQRYSLEGYVNSLGNHKHQRYLSYINICSPAVPEEICCGSDYLDLKELILEDIIWVDEI 380
Query: 323 DGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPD 382
DGL +I +IE CK++G+DCEWKPN+ KG K NKVSI+QIASD+ FIFDLIKL ED P
Sbjct: 381 DGLLNSISYIEACKIIGVDCEWKPNFEKGSKPNKVSIIQIASDKKAFIFDLIKLYEDDPK 440
Query: 383 VLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLS 442
VLDSC RI+ S ILKLGYN QCD+ QL+ SYGEL+CF+ YEMLLDIQ +FK GGLS
Sbjct: 441 VLDSCFRRIMCSSNILKLGYNLQCDLHQLSQSYGELKCFQSYEMLLDIQKLFKGTTGGLS 500
Query: 443 GLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPT-DVSEG 501
GL++KILGAGLNKTRRNSNWEQRPL+QNQ EYAALDAVVL+ IFHHV+ QP V+EG
Sbjct: 501 GLSKKILGAGLNKTRRNSNWEQRPLTQNQKEYAALDAVVLVHIFHHVK--GQPQFGVTEG 558
Query: 502 HDKIEWKSYIVSHMDNPKKS 521
K+EWKS+IVS + N + +
Sbjct: 559 C-KVEWKSHIVSRVKNSRST 577
>gi|357134047|ref|XP_003568631.1| PREDICTED: probable exonuclease mut-7 homolog [Brachypodium
distachyon]
Length = 523
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 272/519 (52%), Positives = 360/519 (69%), Gaps = 46/519 (8%)
Query: 40 LYLLKECYIHGTCKATRKFRALQQQVSQALCNSPEPGPATFIVRCLYVLPIFG-VYSEGF 98
+YLLK+ Y++GT KAT KFR LQQQV AL N+P+PGP T+IV+C+Y++P+ G ++EGF
Sbjct: 1 MYLLKDSYLYGTHKATLKFRILQQQVKSALHNAPQPGPFTYIVQCMYIVPLLGHSHAEGF 60
Query: 99 SHLIISALRRHQKTTVNSADSTQAKEIAAYLFLDITGGFVDHDEKLMVKILEAFDVRLTD 158
SH++IS+LR + D AK +AA L LDI V H+E+++VK+LE FD+ L D
Sbjct: 61 SHMLISSLRHLKSMESVQEDFIDAKCLAAQLVLDILASVVPHEERILVKLLETFDIELKD 120
Query: 159 IEKAITQLKAQNEHRFDTAKTVIEQYIFAMIDSQSYMTAVSLLEHFSIRQSGESFLLKMI 218
+ A+ K + + + ++QY+ + S+SY+TAV+L+ FSI+ ESFL+ ++
Sbjct: 121 MAHALYGSKL-DFGDVEKTREHLKQYVQCFMKSESYVTAVALITRFSIQCCDESFLITLM 179
Query: 219 QNKEFKAAEKWATFMGKPIL---------------------------------------- 238
+ +FK AE+WA FMGK ++
Sbjct: 180 GSNQFKEAEEWAAFMGKEMIVVLIQKYLDIKMLKGANELVKQYDLTEEFPDVNYLYKESS 239
Query: 239 LKRLAEKACWDIAEAKTKGDKRLLEYLVYLAMEAGYSEKVDELCERYSLEGFLKTREPEA 298
LK+LAEK CWD+AE + K + +L+EYLVYLAMEAGY EKVDELC+RYSLEG+ + PE
Sbjct: 240 LKKLAEKGCWDVAEVRAKKETKLMEYLVYLAMEAGYMEKVDELCQRYSLEGYANSLVPEE 299
Query: 299 GFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS 358
F S +L LK L++E+I+WVDE++GL A +IE CK++G+DCEWKPN+ KG + NKVS
Sbjct: 300 VFCRSDYLDLKTLILEEIVWVDEIEGLLNATSYIEACKIIGVDCEWKPNFEKGSRPNKVS 359
Query: 359 IMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGEL 418
I+QIASD+ FIFDLIKL ED P LD C RI+ S +LKLGYN QCD+ QL+ SYGEL
Sbjct: 360 IIQIASDKKAFIFDLIKLYEDDPKALDCCFRRIMCSSNLLKLGYNLQCDLHQLSQSYGEL 419
Query: 419 ECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALD 478
+CF+ YEMLLDIQ +FKE GGLSGL++KILGAGLNKTRRNSNWE+RPLSQNQ EYAALD
Sbjct: 420 QCFQSYEMLLDIQKLFKETTGGLSGLSKKILGAGLNKTRRNSNWEKRPLSQNQKEYAALD 479
Query: 479 AVVLLQIFHHVRSCSQPT-DVSEGHDKIEWKSYIVSHMD 516
AVVL+ IFHHVR QP V+EG ++EWKS+IVS ++
Sbjct: 480 AVVLVHIFHHVR--GQPQFGVTEGR-QVEWKSHIVSRVN 515
>gi|242087595|ref|XP_002439630.1| hypothetical protein SORBIDRAFT_09g017250 [Sorghum bicolor]
gi|241944915|gb|EES18060.1| hypothetical protein SORBIDRAFT_09g017250 [Sorghum bicolor]
Length = 562
Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust.
Identities = 274/567 (48%), Positives = 378/567 (66%), Gaps = 50/567 (8%)
Query: 1 MGLEERVAESCINGHKADCAWTVSVHTFSDITNISPVVFLYLLKECYIHGTCKATRKFRA 60
MG E+V ++ D ++ +H FSD++++ F+YLLK+CY +GT KAT KF+
Sbjct: 1 MGCFEQVTPEGPETNQHDEQRSIRLHAFSDLSHVPAATFIYLLKDCYGYGTNKATSKFKI 60
Query: 61 LQQQVSQALCNSPEPGPATFIVRCLYVLPIFG-VYSEGFSHLIISALRRHQKTTVNSADS 119
L Q V AL N P+PGP T++V+C+Y++P+ G YSEGFSH++ S+LR + D
Sbjct: 61 LMQLVKVALHNGPQPGPFTYVVQCMYIVPLLGKTYSEGFSHMLTSSLRHLKSVESVQKDF 120
Query: 120 TQAKEIAAYLFLDITGGFVDHDEKLMVKILEAFDVRLTDIEKAITQLKAQNEHRFDTAKT 179
+AK +AA L LDI V H+ ++++K+LE F++ L D+ A+ + ++ A+
Sbjct: 121 LEAKHLAAQLVLDILDSVVPHENRILIKLLETFEIELRDMAHALYGSELYDD--LMKARE 178
Query: 180 VIEQYIFAMIDSQSYMTAVSLLEHFSIRQSGESFLLKMIQNKEFKAAEKWATFMGKPI-- 237
+ Q + ++S+S AV+L+ FSI+ ESF++K+I+N + + AE+ ATFMGK +
Sbjct: 179 HLRQQVKRCMESESNAVAVALITRFSIQCCDESFIIKLIENNQLEIAEECATFMGKEMIS 238
Query: 238 --------------------------------------LLKRLAEKACWDIAEAKTKGDK 259
L+K+LAEK CWDIAE + K +
Sbjct: 239 LVIQKYLDTKMLKSANKLVKEHELTEDFPDVSYLYKESLVKKLAEKGCWDIAETRAKKET 298
Query: 260 RLLEYLVYLAMEAGYSEKVDELCERYSLEGFLKTREPEAGFVHSRFLHLKELVVEDIIWV 319
+LLEYLVYLAMEAGY EKVDELC+RYSLE ++ + PE F S +L LK+L VE+I+WV
Sbjct: 299 KLLEYLVYLAMEAGYMEKVDELCQRYSLESYVDSLVPEKVFCVSDYLDLKKLDVEEIVWV 358
Query: 320 DEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAED 379
DE++GL A +IE CK++G+DCEW+PN+ K K +KVSI+QIASD++ FIFDLIKL ED
Sbjct: 359 DEINGLLSATSNIEACKIIGMDCEWRPNFEKNTKPSKVSIIQIASDKVAFIFDLIKLYED 418
Query: 380 VPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKG 439
P LDSCL RI+ S ILKLGY+ QCD+ QL SYGEL+CF+ YEMLLD+Q +FK G
Sbjct: 419 DPKTLDSCLRRIMCSSKILKLGYDIQCDLHQLTQSYGELDCFQSYEMLLDMQKLFKGVTG 478
Query: 440 GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH-HVRSCSQPTDV 498
GLSGL+++ILGAGLNK+RRNSNWEQRPL+QNQ EYAALDAVVL+ IFH H+R +Q V
Sbjct: 479 GLSGLSKEILGAGLNKSRRNSNWEQRPLTQNQKEYAALDAVVLVHIFHEHMRRQAQ-FGV 537
Query: 499 SEGHDKIEWKSYIVSHMDNPKKSKKRP 525
SEG K+EWKS++VS ++ S +RP
Sbjct: 538 SEG-SKVEWKSHVVSRVN----SMRRP 559
>gi|413948990|gb|AFW81639.1| hypothetical protein ZEAMMB73_173155 [Zea mays]
gi|413948991|gb|AFW81640.1| hypothetical protein ZEAMMB73_173155 [Zea mays]
Length = 404
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 163/399 (40%), Positives = 244/399 (61%), Gaps = 42/399 (10%)
Query: 1 MGLEERVAESCINGHKADCAWTVSVHTFSDITNISPVVFLYLLKECYIHGTCKATRKFRA 60
MG E+V ++ D ++ +H FSD++++ F+YLLK+CY +GT KAT KF+
Sbjct: 1 MGRFEQVTPEGPETNQHDEQRSIRLHAFSDLSHVPAATFIYLLKDCYGYGTNKATSKFKI 60
Query: 61 LQQQVSQALCNSPEPGPATFIVRCLYVLPIFG-VYSEGFSHLIISALRRHQKTTVNSADS 119
L Q V AL N P+PGP T++V+C+Y++P+ G YSEGFSH++ S+L+ + D
Sbjct: 61 LMQLVKVALHNGPQPGPFTYVVQCMYIVPLLGKTYSEGFSHMLTSSLKHLKSVESAQKDF 120
Query: 120 TQAKEIAAYLFLDITGGFVDHDEKLMVKILEAFDVRLTDIEKAITQLKAQNEHRFDTAKT 179
+AK +AA L LDI V H+ +++VK+LE F++ L D+ +A+ ++ A+
Sbjct: 121 LEAKHLAAQLVLDILDSIVPHENRILVKLLETFEIELRDMARALYD-SELDDGDLMKARE 179
Query: 180 VIEQYIFAMIDSQSYMTAVSLLEHFSIRQSGESFLLKMIQNKEFKAAEKWATFMGKPIL- 238
+ Q + ++S+S AV+L+ HFSI+ ESF++K+I+N + + AE+ A FMGK ++
Sbjct: 180 HLRQQVKRCMESESNALAVTLITHFSIQCCDESFIIKLIKNNQLEIAEQCAIFMGKEMIS 239
Query: 239 ---------------------------------------LKRLAEKACWDIAEAKTKGDK 259
+K+LAEK CWDIAE + K D
Sbjct: 240 LVVQKYLDMKMLKSANKLVKEHELTEEFPDVSYLYKESSVKKLAEKGCWDIAETRAKKDT 299
Query: 260 RLLEYLVYLAMEAGYSEKVDELCERYSLEGFLKTREPEAGFVHSRFLHLKELVVEDIIWV 319
+LLEYLVYLAMEAGY EKVDELC+RYS+EG++ + PE F S +L LK+L VE+I+WV
Sbjct: 300 KLLEYLVYLAMEAGYMEKVDELCKRYSIEGYVDSLVPEKVFCVSDYLDLKKLDVEEIVWV 359
Query: 320 DEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS 358
DE++GL A IE CK++G+DCEW+PN+ K K +KV+
Sbjct: 360 DEINGLLNATSDIEACKIIGMDCEWRPNFEKNTKSSKVT 398
>gi|357441843|ref|XP_003591199.1| hypothetical protein MTR_1g083820 [Medicago truncatula]
gi|355480247|gb|AES61450.1| hypothetical protein MTR_1g083820 [Medicago truncatula]
Length = 301
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 149/297 (50%), Positives = 193/297 (64%), Gaps = 42/297 (14%)
Query: 40 LYLLKECYIHGTCKATRKFRALQQQVSQALCNSPEPGPATFIVRCLYVLPIFGVYSEGFS 99
+++LKECY HG CKAT KFRALQ+Q+ L N P+PGPATFIV+CLYV P+F S+GF+
Sbjct: 1 MFMLKECYYHGNCKATVKFRALQEQLCLVLHNDPKPGPATFIVQCLYVSPVFDNQSQGFT 60
Query: 100 HLIISALRRHQKTT--VNSADSTQAKEIAAYLFLDITGGFVDHDEKLMVKILEAFDVRLT 157
HL+IS+ RR K + + DS K AAYL ++I G + HDE +++KILE FDV+L
Sbjct: 61 HLVISSFRRFLKRSKPTITEDSLDIKNSAAYLLVNIIRGQIKHDEMIVMKILETFDVKLP 120
Query: 158 DIEKAITQLKAQNEHRFDTAKTVIEQYIFAMIDSQSYMTAVSLLEHFSIRQSGESFLLKM 217
++EKA+ Q K ++ A+ +IEQY F ++ SQ Y AV+L+EHFSI G+SFLL M
Sbjct: 121 NVEKALCQNKEKDYLSCGKAQELIEQYTFELVKSQLYTIAVTLMEHFSISHYGQSFLLDM 180
Query: 218 IQNKEFKAAEKWATFMGKPIL--------------------------------------- 238
I++ +FKAAEKWATFMGKP+L
Sbjct: 181 IKSNQFKAAEKWATFMGKPMLSILIEEFVQRNMLNDAYQIIKKNNLKQDFPDVYKRCKES 240
Query: 239 -LKRLAEKACWDIAEAKTKGDKRLLEYLVYLAMEAGYSEKVDELCERYSLEGFLKTR 294
LK LAEK CWD+AEA+ D++L+EYLVYLAMEAGY EKVDELCERYSL+ FL +
Sbjct: 241 SLKSLAEKGCWDVAEARINNDRQLMEYLVYLAMEAGYMEKVDELCERYSLDRFLDIK 297
>gi|325186923|emb|CCA21467.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 1069
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 107/193 (55%), Gaps = 16/193 (8%)
Query: 311 LVVEDIIWVDEVDGLHKA----ICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDE 366
L E +I VD L +A + I + + ID EW+P + +K SI+QIA +
Sbjct: 874 LPTEGVILVDSEAKLREAHKVLVSSIHPVQKIAIDSEWRPETSRKSMSSKCSIVQIACKD 933
Query: 367 MVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEM 426
FIFDL+ L + D +++ +LQS I+KL YNFQ D+K+L +S+ E CF+
Sbjct: 934 HSFIFDLMTLK--MKD-METMFAHLLQSTEIVKLVYNFQGDLKRLKYSFPEAACFEEIRN 990
Query: 427 LLDI---------QNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAAL 477
++D+ +N GLS LA+ LG L K + S+WEQRPLS Q+EYAAL
Sbjct: 991 VVDLAKPDPILAAENNLARKSRGLSDLAKSSLGFPLCKRMQRSDWEQRPLSSAQIEYAAL 1050
Query: 478 DAVVLLQIFHHVR 490
DA VLL I+ +R
Sbjct: 1051 DAYVLLMIYERLR 1063
>gi|293334477|ref|NP_001168997.1| uncharacterized protein LOC100382828 [Zea mays]
gi|223974363|gb|ACN31369.1| unknown [Zea mays]
Length = 98
Score = 120 bits (302), Expect = 1e-24, Method: Composition-based stats.
Identities = 60/91 (65%), Positives = 76/91 (83%), Gaps = 3/91 (3%)
Query: 426 MLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
M+LD+Q +FK GGLSGL+++ILGAGLNKTRRNSNWEQRPL+QNQ EYAALDAVVL+ I
Sbjct: 1 MVLDMQKLFKGVTGGLSGLSKEILGAGLNKTRRNSNWEQRPLTQNQKEYAALDAVVLVHI 60
Query: 486 FH-HVRSCSQPTDVSEGHDKIEWKSYIVSHM 515
FH H+R +Q VSEG ++EW+S++VS +
Sbjct: 61 FHEHMRRQAQ-FGVSEG-SRVEWRSHVVSRV 89
>gi|291224294|ref|XP_002732140.1| PREDICTED: Probable exonuclease mut-7 homolog [Saccoglossus
kowalevskii]
Length = 1166
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 112/208 (53%), Gaps = 29/208 (13%)
Query: 313 VEDIIWVDEVDGLHK-AICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIF 371
VE I VD DGL+K A + ++GID EW+P + C+ KVS++Q+AS + VFI
Sbjct: 443 VEHIQMVDSEDGLNKCAEILFKPGAIIGIDSEWRPAFGPICEPVKVSLLQLASIDAVFIL 502
Query: 372 DLIKLAEDVP-DVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDI 430
D++ L++ V D+L + ++ + ILKLGY DIK L SY + + ++D+
Sbjct: 503 DMMTLSQCVDVDILKDFMLKLFTTHDILKLGYGIDGDIKMLFKSYPLMRNAADLQRIVDL 562
Query: 431 ----QNVFKEPK-----------------------GGLSGLAEKILGAGLNKTRRNSNWE 463
+N+ KE GLS L ++ LG LNK R S+WE
Sbjct: 563 SVLTRNIQKESPELLQNSSTTEDASGEGSGKKGKEKGLSELVQRCLGKPLNKMERLSDWE 622
Query: 464 QRPLSQNQLEYAALDAVVLLQIFHHVRS 491
+RPL Q QL YAALDA LL+++ H+R+
Sbjct: 623 RRPLRQAQLIYAALDAYCLLEVYDHIRN 650
>gi|270003369|gb|EEZ99816.1| hypothetical protein TcasGA2_TC002596 [Tribolium castaneum]
Length = 1249
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 98/180 (54%), Gaps = 21/180 (11%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRI 391
++ +VVGIDCEWKPN+ G + N++++MQIAS + VFI D+I + VP + +
Sbjct: 775 LQDVEVVGIDCEWKPNF--GSQKNELALMQIASRKNVFILDIISIGTKVPHLWQELGKFL 832
Query: 392 LQSPGILKLGYNFQCDIKQLAHSYGELECF-----------------KHYEMLLDIQNVF 434
+ ILKLG+ F DI + HS EL K+ +++L +
Sbjct: 833 FNNCDILKLGFGFTSDILMIKHSLPELNFTPKQVGFLDLLSLWKLLEKYPKVVLPYEVQG 892
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQ 494
P L L + LG L+K+ + SNWE+RPL +QL YAALDA L++++ ++ C +
Sbjct: 893 SGP--SLGTLVNQCLGRPLDKSDQFSNWEKRPLRNSQLVYAALDAYCLIEVYDVIKGCCE 950
>gi|359070742|ref|XP_002691738.2| PREDICTED: probable exonuclease mut-7 homolog [Bos taurus]
Length = 1026
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 103/186 (55%), Gaps = 25/186 (13%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV----PDVLDSC 387
++ +VVG+D EW+P++ G + +VS+MQ+A + VF+ DL +L+ P
Sbjct: 446 LQPGQVVGVDLEWRPSFGTGGR-PRVSLMQVAVEGRVFLLDLPRLSSPAGGQGPRAFSQL 504
Query: 388 LTRILQSPGILKLGYNFQCDIKQLAHSYGEL-ECFKHYEMLLDIQNVFKE---------- 436
++++L P I KLGY D++ L SY L + + + LD+ V ++
Sbjct: 505 VSQLLSDPSITKLGYGMAGDLRSLGTSYPALAQAGQKLQGGLDLLQVHRQMRVADRPAPA 564
Query: 437 ------PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
P+G LS L +++LG L+KT++ SNW++RPL + QL YAA DA LL+++ +
Sbjct: 565 VDGAAGPRG-LSLLVQQVLGKPLDKTQQLSNWDRRPLGEGQLVYAAADAYCLLEVYWAL- 622
Query: 491 SCSQPT 496
C +P
Sbjct: 623 -CREPA 627
>gi|440894519|gb|ELR46950.1| Putative exonuclease mut-7-like protein, partial [Bos grunniens
mutus]
Length = 855
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 103/186 (55%), Gaps = 25/186 (13%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV----PDVLDSC 387
++ +VVG+D EW+P++ G + +VS+MQ+A + VF+ DL +L+ P
Sbjct: 384 LQPGQVVGVDLEWRPSFGTGGR-PRVSLMQVAVEGRVFLLDLPRLSSPAGGQGPRAFSQL 442
Query: 388 LTRILQSPGILKLGYNFQCDIKQLAHSYGEL-ECFKHYEMLLDIQNVFKE---------- 436
++++L P I KLGY D++ L SY L + + + LD+ V ++
Sbjct: 443 VSQLLSDPSITKLGYGMAGDLRSLGTSYPALAQAGQKLQGGLDLLQVHRQMRVADRPAPA 502
Query: 437 ------PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
P+G LS L +++LG L+KT++ SNW++RPL + QL YAA DA LL+++ +
Sbjct: 503 VDGAAGPRG-LSLLVQQVLGKPLDKTQQLSNWDRRPLGEGQLVYAAADAYCLLEVYWAL- 560
Query: 491 SCSQPT 496
C +P
Sbjct: 561 -CREPA 565
>gi|384244778|gb|EIE18276.1| hypothetical protein COCSUDRAFT_68365 [Coccomyxa subellipsoidea
C-169]
Length = 840
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 100/186 (53%), Gaps = 19/186 (10%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKP--NYVKGC-KMNKVSIMQIASDEMVFIFDLI 374
+VD GL +A +E V+G+DCEW+P +G + VS++QIAS V + D+
Sbjct: 606 FVDSAAGLAQAASLLEEAAVLGLDCEWEPCTESRRGSDRHPPVSLLQIASRRHVVVLDMA 665
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF 434
L + LD+ LT +L S ++K G DI QLA S+ ++ F + LL++ + F
Sbjct: 666 ALHQVAQ--LDALLTMLLCSNDVIKAGVGVVEDIGQLARSFPAIQAFTNCRGLLELGSAF 723
Query: 435 KEPKG--------------GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAV 480
+ + GLS +AE LG L+K+ + S W +RPLS+ QL YAALDA+
Sbjct: 724 SQSEAAQLGMQAVQKKHGPGLSAMAEACLGRPLDKSMQMSRWNRRPLSERQLTYAALDAL 783
Query: 481 VLLQIF 486
+ I+
Sbjct: 784 ASVLIY 789
>gi|358422031|ref|XP_001788105.2| PREDICTED: probable exonuclease mut-7 homolog [Bos taurus]
Length = 952
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 103/186 (55%), Gaps = 25/186 (13%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV----PDVLDSC 387
++ +VVG+D EW+P++ G + +VS+MQ+A + VF+ DL +L+ P
Sbjct: 446 LQPGQVVGVDLEWRPSFGTGGR-PRVSLMQVAVEGRVFLLDLPRLSSPAGGQGPRAFSQL 504
Query: 388 LTRILQSPGILKLGYNFQCDIKQLAHSYGEL-ECFKHYEMLLDIQNVFKE---------- 436
++++L P I KLGY D++ L SY L + + + LD+ V ++
Sbjct: 505 VSQLLSDPSITKLGYGMAGDLRSLGTSYPALAQAGQKLQGGLDLLQVHRQMRVADRPAPA 564
Query: 437 ------PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
P+G LS L +++LG L+KT++ SNW++RPL + QL YAA DA LL+++ +
Sbjct: 565 VDGAAGPRG-LSLLVQQVLGKPLDKTQQLSNWDRRPLGEGQLVYAAADAYCLLEVYWAL- 622
Query: 491 SCSQPT 496
C +P
Sbjct: 623 -CREPA 627
>gi|449015749|dbj|BAM79151.1| unknown ribonuclease [Cyanidioschyzon merolae strain 10D]
Length = 1224
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 95/189 (50%), Gaps = 27/189 (14%)
Query: 338 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV--PDVLDSCLTRILQSP 395
VG+D EW+P G + + +++QIA VF+ DL+++ D L+ L R+ +SP
Sbjct: 588 VGLDVEWRPVRTSGLQ-PRCALLQIAFPADVFLVDLLRIDADALFAMRLNEALRRLFRSP 646
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEP------------------ 437
ILK+G+ F D +L HSY L CF L D+ + E
Sbjct: 647 AILKVGFCFSSDFVRLRHSYLGLSCFDAIVALRDLDRIGSEGTDAFCADLATLVGRTSVR 706
Query: 438 -KG----GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSC 492
+G GL+ L LG +K R S+WE RPL++ Q+EYAALDA VLL + HV C
Sbjct: 707 RRGRLTVGLAQLVAVFLGRAFDKRPRCSDWEARPLTRAQIEYAALDAWVLLALRRHV-PC 765
Query: 493 SQPTDVSEG 501
+ + + G
Sbjct: 766 ASASLIRTG 774
>gi|449675992|ref|XP_002154256.2| PREDICTED: probable exonuclease mut-7 homolog [Hydra
magnipapillata]
Length = 610
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 142/277 (51%), Gaps = 30/277 (10%)
Query: 284 RYSL-EGFLKTREPEAGFVHSRFLHLKELVVEDIIWVDEVDGLHKA-ICHIEGCKVVGID 341
++SL GFL + +A + ++F K L ++D+I VD + L +A + +V+G D
Sbjct: 320 QFSLSNGFLSAEKAQA--LENQFYKFK-LPLKDVIIVDTIPKLIEAEKILFKPKQVIGFD 376
Query: 342 CEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKL--AEDVPDVLDSCLTRILQSPGILK 399
EWKP++ + + +KVS +Q+A + VFI D+++L A+ + L + S ++K
Sbjct: 377 TEWKPSFTRAGEQDKVSTLQLAVIDKVFIVDMLQLYVADSAENALREFFYKFFTSKDVVK 436
Query: 400 LGYNFQCDIKQLAHSYGELECF-KHYEMLLDI----QNVFKEP--------------KGG 440
+GY D+K L + ++ F + L+D+ + + K P + G
Sbjct: 437 IGYGIVGDLKILIGMFAYMKEFILNASNLVDLNEISEKILKYPVTNAYLYPVQSVQNEKG 496
Query: 441 LSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSE 500
LS L ++LG L+KT + S+W++RPLS NQ++YAALDA LL+++ + T +
Sbjct: 497 LSLLIYRLLGQSLDKTFQVSDWDKRPLSTNQIQYAALDAFCLLEVYKVLNKIVFETQIKV 556
Query: 501 G---HDKIEW-KSYIVSHMDNPKKSKKRPTIKKETES 533
+ K++W K V K K+ KK ES
Sbjct: 557 NMLENVKLKWLKPTNVPIQRKDKYEKRNELQKKNVES 593
>gi|427785563|gb|JAA58233.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 598
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 120/216 (55%), Gaps = 21/216 (9%)
Query: 303 SRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQI 362
S++L L+ + + D+ VD DGL I I+ VVGID EWKP G +++S++Q+
Sbjct: 347 SKYLPLR-IDLCDVHMVDTADGLDTCIEVIKDYDVVGIDAEWKPTM--GLTPSRLSLVQL 403
Query: 363 ASDEMVFIFDLIKLAEDVPD-VLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY----GE 417
A + V++ D++KL+E + + T +L S ILKLG+ D+K LA + G+
Sbjct: 404 AVWDNVYVLDMLKLSEILSEEQWGQLYTDVLSSNEILKLGFGIAEDLKLLAETIKLPGGK 463
Query: 418 LE-----CFKHYEMLLDIQNVFKE--PK----GGLSGLAEKILGAGLNKTRRNSNWEQRP 466
++ C ++ D + K PK GLS L +LG LNK + S+WE RP
Sbjct: 464 VQNVVDLCSFAEKLRCDCPTLMKPVVPKERGHKGLSELTRTLLGLPLNKDEQCSDWENRP 523
Query: 467 LSQNQLEYAALDAVVLLQIFHHV--RSCSQPTDVSE 500
L Q+Q++YAALDA LLQ++ + R+ +Q ++ E
Sbjct: 524 LRQSQMKYAALDAFCLLQLYEELYKRADAQQINLRE 559
>gi|194226096|ref|XP_001492084.2| PREDICTED: probable exonuclease mut-7 homolog [Equus caballus]
Length = 870
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 97/176 (55%), Gaps = 20/176 (11%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
+VG+D EW+P++ G + +VS+MQ+A + VF+ DL+ L++ + R+L P
Sbjct: 404 LVGVDLEWRPSFGTGGR-PQVSLMQVAVEGHVFLLDLLVLSQ-TSQAFSQLVLRLLSDPS 461
Query: 397 ILKLGYNFQCDIKQLAHSYGEL-ECFKHYEMLLDIQNVFKE-------------PKG--G 440
I KLGY D++ L S L K LD+Q V ++ KG G
Sbjct: 462 ITKLGYGMAGDLRSLGASCPALAHVEKQLRGSLDLQQVHRQMRVVDMPAPSVDGTKGPRG 521
Query: 441 LSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPT 496
LS L +++LG L+K ++ SNW++RPLS+ QL YAA DA LL+++ + C PT
Sbjct: 522 LSLLVQQVLGKPLDKRQQLSNWDRRPLSEAQLVYAATDAYCLLEVYRVL--CRDPT 575
>gi|145345029|ref|XP_001417026.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577252|gb|ABO95319.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 497
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 35/215 (16%)
Query: 302 HSRFLHLKELVVEDIIWVDEVDGLHKAI-----------------CHIEGCKVVGIDCEW 344
+ R+ L + + + WVD+VDGL +A + +G+D EW
Sbjct: 49 NDRYTPLPNVPEDRVYWVDDVDGLKRATEVVLALAAAGTDENETSTSVRTPPCLGLDAEW 108
Query: 345 KPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA-----EDVPDVLDSCLTRILQSPGILK 399
+P V+++QIA+ E VF+ DL+ A E + D L +L S G+ K
Sbjct: 109 RPG-----DNTPVALLQIATREEVFLIDLLATAPRSAGESLNVATDELLKAVLWSEGVYK 163
Query: 400 LGYNFQCDIKQLAHSYGELECFKHYEM-LLDIQNVF------KEP-KGGLSGLAEKILGA 451
LG++F D+K++ SY L ++ L+D++ + K P + GL+ L +++G
Sbjct: 164 LGFSFAYDVKRMKASYSHLSVWEEKSRNLVDVKQLAYAAMPNKTPLRCGLAVLTRQVIGC 223
Query: 452 GLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
L+K + S+W +RPL+++Q+ YAA D L IF
Sbjct: 224 LLDKKEQCSDWGKRPLTESQMAYAAADGYSLCLIF 258
>gi|308801591|ref|XP_003078109.1| Predicted 3'-5' exonuclease (ISS) [Ostreococcus tauri]
gi|116056560|emb|CAL52849.1| Predicted 3'-5' exonuclease (ISS) [Ostreococcus tauri]
Length = 1313
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 181/424 (42%), Gaps = 97/424 (22%)
Query: 143 KLMVKILEAFDVRLTDIEKAITQLKAQNEHRFDTAKTVIEQYIFAMIDSQSYMTAVSLLE 202
+ +V+++E F + L D+ A D A + +YI ID +A++L+
Sbjct: 146 RPVVRLIETFGLELEDLSFASR----------DEASDAVTRYINEQIDRGKQRSAMALVF 195
Query: 203 HFSIRQSGE-SFLLKMIQNKEFKAAEKWATFMGKPILLKRLAEKACWDIAEAKTKG---- 257
HF++ Q LL ++Q KE+ A ++A+ +P L K+ E D E
Sbjct: 196 HFNLDQFATFETLLGLVQAKEYTIALEFASM--EPRLTKQWIELCINDGVENHNHASLRN 253
Query: 258 ---------------DKRLLEYLVYLAMEAGYSE--------KVDELCERYSLEGFLKTR 294
D R + Y ++ G DE +R+ +E T
Sbjct: 254 AYKAVTTFKLEHEFPDVRTVYYKSTISRMIGKGSFEAALRRAGSDEELQRWVVESLAATD 313
Query: 295 EPEAGFVHSR-----------------------FLHLKELVVEDIIWVDEVDGLHKAI-C 330
+ E ++ F L + ++VD+ L +A
Sbjct: 314 QFEYAVEYANRCGLYFNCDANELAEIQARRRATFFQLPRHLDGACVFVDDEKSLLEASHR 373
Query: 331 HIEGCKVVGIDCEWKPNYVKGCKM-----NKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
++ ++GID EW + + ++V+I+QIAS V I D+ KL PD L+
Sbjct: 374 YLWNQGMIGIDTEWGADVGEDADNADRSGDEVAILQIASQLGVVILDVPKLLYSCPDTLE 433
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK---------- 435
+ + ++ + +LKLG+ Q D+++L+ + + FK + ++D+Q ++K
Sbjct: 434 TTIGKMFEDEEVLKLGFAVQEDLRRLSKCH---KAFKTVQGVVDLQKLWKLLVSKARTRS 490
Query: 436 --------------EPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVV 481
+P G LS L +LG L+K R S+W +RPL+Q+Q+EYAALDA
Sbjct: 491 VSAPWSTEAELLRYQPVG-LSALVAAVLGKPLDKMMRMSDWSRRPLTQSQMEYAALDAWT 549
Query: 482 LLQI 485
L+++
Sbjct: 550 LVEV 553
>gi|335281300|ref|XP_003122404.2| PREDICTED: probable exonuclease mut-7 homolog [Sus scrofa]
Length = 1150
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 98/186 (52%), Gaps = 25/186 (13%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV----PDVLDSC 387
++ +VV +D EW+P++ G + + S+MQ+A + VF+ DL +L P
Sbjct: 672 LQPGQVVSVDLEWRPSFGVGGR-PQASLMQVAVEGRVFLLDLPQLLSPARGQEPQAFSQL 730
Query: 388 LTRILQSPGILKLGYNFQCDIKQLAHSYGEL-ECFKHYEMLLDIQNVFKE---------- 436
++R+L P I KLGY D++ L S L + K LD+ V K+
Sbjct: 731 VSRLLADPSITKLGYGMAGDLRSLGASCPALAQAQKQLRGSLDLLQVHKQLRVVDAPAPG 790
Query: 437 ------PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
P+G LS L +++LG L+KT++ SNW++RPL + QL YAA DA LL+++ +
Sbjct: 791 VDGAAGPRG-LSLLVQQVLGKPLDKTQQLSNWDRRPLGEEQLVYAAADAYCLLEVYWAL- 848
Query: 491 SCSQPT 496
C +P
Sbjct: 849 -CREPA 853
>gi|328776161|ref|XP_391887.3| PREDICTED: probable exonuclease mut-7 homolog [Apis mellifera]
Length = 954
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 93/173 (53%), Gaps = 20/173 (11%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRI 391
++G +VGID EWKP + G K +++++QIA+ + V+I D+ + ++ +
Sbjct: 410 LDGVSIVGIDSEWKPCF--GTKQTELALIQIATKDNVYIIDVTTMGNKFTELWAKLALVL 467
Query: 392 LQSPGILKLGYNFQCDIKQLAHSYGELECFKHY-EMLLDIQNVFKE-------------- 436
++ ILKLG+ D+ + S L K Y + LDI N++K+
Sbjct: 468 FENKNILKLGFGIAQDMTVIRSSLPALSKIKIYGQGYLDIVNLWKKLVEDYKFVFPHESD 527
Query: 437 ---PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
K LS L E LG LNK+ + SNWEQRPL ++Q+ YAALDA LL+I+
Sbjct: 528 DQFTKKNLSKLVELCLGQKLNKSDQFSNWEQRPLRESQIIYAALDAYCLLEIY 580
>gi|380016821|ref|XP_003692371.1| PREDICTED: LOW QUALITY PROTEIN: probable exonuclease mut-7 homolog
[Apis florea]
Length = 938
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 93/173 (53%), Gaps = 20/173 (11%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRI 391
++G +VGID EWKP + G K +++++QIA+ + V+I D+ + ++ +
Sbjct: 394 LDGISIVGIDSEWKPCF--GTKQTELALIQIATKDNVYIIDVTTMGNKFTELWAKLALVL 451
Query: 392 LQSPGILKLGYNFQCDIKQLAHSYGELECFKHY-EMLLDIQNVFKE-------------- 436
++ ILKLG+ D+ + S L K Y + LDI N++K+
Sbjct: 452 FENKSILKLGFGIAQDMTVIRSSLPALSKIKIYGQGYLDIVNLWKKLVEDYKFVFPHESD 511
Query: 437 ---PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
K LS L E LG LNK+ + SNWEQRPL ++Q+ YAALDA LL+I+
Sbjct: 512 DQFTKKNLSKLVELCLGQKLNKSDQFSNWEQRPLRESQIIYAALDAYCLLEIY 564
>gi|410979605|ref|XP_003996172.1| PREDICTED: probable exonuclease mut-7 homolog [Felis catus]
Length = 973
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 92/170 (54%), Gaps = 21/170 (12%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAE----DVPDVLDSCLTRI 391
+VVG+D EW+P++ G + + S+MQ+A + VF+ DL L+ V ++R+
Sbjct: 503 QVVGVDVEWRPSFGTGGR-PQASVMQLAVEGRVFLMDLPVLSRPAGGQVSKAFSRLVSRL 561
Query: 392 LQSPGILKLGYNFQCDIKQLAHSYGEL-ECFKHYEMLLDIQNVFKE------PKGG---- 440
L P + KLGY D++ L S L K LD+ V ++ P GG
Sbjct: 562 LSDPSVTKLGYGLAGDLRSLGASCPALAHVEKQLRGGLDLLRVHRQMRVVNMPAGGTYEA 621
Query: 441 -----LSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
LS L +++LG L+KT++ SNW++RPLS+ QL YAA DA LL++
Sbjct: 622 RGLRGLSLLVQQVLGKPLDKTQQLSNWDRRPLSEGQLVYAAADAYCLLEV 671
>gi|301781518|ref|XP_002926188.1| PREDICTED: LOW QUALITY PROTEIN: probable exonuclease mut-7 homolog
[Ailuropoda melanoleuca]
Length = 849
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 118/236 (50%), Gaps = 31/236 (13%)
Query: 293 TREPEAGFVHSRFLHLK-ELVVEDIIWVDEVDGLHKAICH----IEGCKVVGIDCEWKPN 347
+R PE F R + + + EDI ++ + L + H ++ +VVG+D EW+P+
Sbjct: 357 SRTPEMPFEDRRVDYYQLPIAREDIHFLASWEDLAR---HEDELLQPGQVVGVDLEWRPS 413
Query: 348 YVKGCKMNKVSIMQIASDEMVFIFDLIKLAE----DVPDVLDSCLTRILQSPGILKLGYN 403
+ G + + SIMQ+A + VF+ D+ L+ V ++++L P I KLGY
Sbjct: 414 FGTGGR-PQASIMQVAVEGRVFLLDVRVLSRPAGGQVSQAFSRLVSQLLSDPSITKLGYG 472
Query: 404 FQCDIKQLAHSYGEL-ECFKHYEMLLDIQNVFK-------------EPKG--GLSGLAEK 447
D++ L S L K LD+ V + E +G GLS L ++
Sbjct: 473 MAGDLRSLGASCPALAHVEKQLRGSLDLLQVHRQMRAVDKPALGRGEARGLRGLSLLVQQ 532
Query: 448 ILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSEGHD 503
+LG L+K+++ SNW++RPLS+ QL YAA DA LL ++ + C +P S D
Sbjct: 533 VLGKPLDKSQQLSNWDRRPLSEGQLVYAAADAYCLLGVYQAL--CREPASFSLPED 586
>gi|281345331|gb|EFB20915.1| hypothetical protein PANDA_015792 [Ailuropoda melanoleuca]
Length = 723
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 118/236 (50%), Gaps = 31/236 (13%)
Query: 293 TREPEAGFVHSRFLHLK-ELVVEDIIWVDEVDGLHKAICH----IEGCKVVGIDCEWKPN 347
+R PE F R + + + EDI ++ + L + H ++ +VVG+D EW+P+
Sbjct: 318 SRTPEMPFEDRRVDYYQLPIAREDIHFLASWEDLAR---HEDELLQPGQVVGVDLEWRPS 374
Query: 348 YVKGCKMNKVSIMQIASDEMVFIFDLIKLAE----DVPDVLDSCLTRILQSPGILKLGYN 403
+ G + + SIMQ+A + VF+ D+ L+ V ++++L P I KLGY
Sbjct: 375 FGTGGR-PQASIMQVAVEGRVFLLDVRVLSRPAGGQVSQAFSRLVSQLLSDPSITKLGYG 433
Query: 404 FQCDIKQLAHSYGEL-ECFKHYEMLLDIQNVFK-------------EPKG--GLSGLAEK 447
D++ L S L K LD+ V + E +G GLS L ++
Sbjct: 434 MAGDLRSLGASCPALAHVEKQLRGSLDLLQVHRQMRAVDKPALGRGEARGLRGLSLLVQQ 493
Query: 448 ILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSEGHD 503
+LG L+K+++ SNW++RPLS+ QL YAA DA LL ++ + C +P S D
Sbjct: 494 VLGKPLDKSQQLSNWDRRPLSEGQLVYAAADAYCLLGVYQAL--CREPASFSLPED 547
>gi|345806145|ref|XP_003435395.1| PREDICTED: probable exonuclease mut-7 homolog [Canis lupus
familiaris]
Length = 921
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 102/192 (53%), Gaps = 23/192 (11%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRI 391
++ +VVG+D EW+P++ G + + SIMQ+A VF+ DL L++ R+
Sbjct: 385 LQPGQVVGVDLEWRPSFGTGGR-PQASIMQVAVGGRVFLLDLPLLSQPTGGQASQAFCRL 443
Query: 392 ----LQSPGILKLGYNFQCDIKQLAHS-----------YGELECFK-HYEM-LLDIQNVF 434
L P I KLGY D++ L S G L+ + H +M + D+ +
Sbjct: 444 VSQLLSDPSITKLGYGMAGDLRSLGASCPTLAHVEKQLRGGLDLLQVHRQMRIADMPALG 503
Query: 435 K-EPKG--GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
+ E +G GLS L +++LG L+K ++ SNW++RPLS+ QL YAA DA LL+++ +
Sbjct: 504 RGEARGLRGLSLLVQQVLGRPLDKAQQLSNWDRRPLSEEQLVYAAADAYCLLEVYQTL-- 561
Query: 492 CSQPTDVSEGHD 503
C +P S D
Sbjct: 562 CREPASFSLSED 573
>gi|299472524|emb|CBN77309.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 648
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 99/212 (46%), Gaps = 25/212 (11%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKL-----AEDVPDVLDS 386
+ G + VG+D E P N+ +++Q+A+ VF+FDLI L + +V D+
Sbjct: 443 VPGVRCVGLDVENSPT------TNRATLLQVATSTDVFLFDLIALLGRAASLEVSRQFDA 496
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDI----QNVFKEPKGGLS 442
+ +L P I+KLG++F D L ++ F+ LL++ V LS
Sbjct: 497 TVEDLLTDPHIVKLGFSFAHDATALRKTFPSARGFRRIAALLEVGELSSAVLGRSTPSLS 556
Query: 443 GLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV------RSCSQPT 496
E LG L+KT S W+ RPL+ +Q+ YAALDA L+ IF + R + P
Sbjct: 557 KTCEAWLGKPLDKTECASKWDVRPLTADQVRYAALDAHCLVGIFEEMLLERGGRLAATPG 616
Query: 497 DVSEGHDKIE----WKSYIVSHMDNPKKSKKR 524
S+G W +V+++D P R
Sbjct: 617 TRSDGSGNENPHRWWTGRLVANIDGPSSHHSR 648
>gi|348677929|gb|EGZ17746.1| hypothetical protein PHYSODRAFT_560259 [Phytophthora sojae]
Length = 1489
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 104/182 (57%), Gaps = 8/182 (4%)
Query: 307 HLKELVVED-IIWVDEVDGLHKA--ICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIA 363
+LK + +D II VD + L A + + +G+D EW+P+ + +K SI+Q+A
Sbjct: 866 YLKIPLAQDRIIVVDNDEALSAATELLMRDSVTRLGLDAEWRPD-SRAAVPSKCSILQVA 924
Query: 364 SDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKH 423
D+ VFIFD +++A + D L+ + S I K+G+ DIK+L S+ +++CF
Sbjct: 925 CDDYVFIFDFVEMA--LGD-LEELFEHLFASERIAKIGFAIDGDIKRLRWSFPDVKCFDT 981
Query: 424 YEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLL 483
+ +LD E L+ + ++ LG L+K ++ S+WE+RPL+ Q+ YAALDA LL
Sbjct: 982 FVNVLDFSFETLEATTHLTYI-KQALGYPLSKLQQKSDWERRPLTPQQVAYAALDAYCLL 1040
Query: 484 QI 485
+
Sbjct: 1041 ML 1042
>gi|383853373|ref|XP_003702197.1| PREDICTED: probable exonuclease mut-7 homolog [Megachile rotundata]
Length = 938
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 89/168 (52%), Gaps = 20/168 (11%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
+VGID EWKP + G K +++++QIA++ V+I D+ + P++ + ++
Sbjct: 409 IVGIDSEWKPCF--GTKQTEIALIQIATETNVYILDVTTMGNKSPELWTELALTLFENKN 466
Query: 397 ILKLGYNFQCDIKQL-----------AHSYGELECFKHYEMLL-DIQNVFKE------PK 438
ILKLG+ D+ + H G ++ +++L+ D + VF K
Sbjct: 467 ILKLGFGIAQDMSVMRESLPALSKIKTHGQGYVDIVHLWQILVNDYKFVFPHESNDHCTK 526
Query: 439 GGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
LS L E LG LNK+ + SNWEQRPL Q+ YAALDA LL+I+
Sbjct: 527 QSLSKLVELCLGQKLNKSDQFSNWEQRPLRSGQITYAALDAYCLLEIY 574
>gi|427779777|gb|JAA55340.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 626
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 119/244 (48%), Gaps = 49/244 (20%)
Query: 303 SRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQI 362
S++L L+ + + D+ VD DGL I I+ VVGID EWKP G +++S++Q+
Sbjct: 347 SKYLPLR-IDLCDVHMVDTADGLDTCIEVIKDYDVVGIDAEWKPTM--GLTPSRLSLVQL 403
Query: 363 ASDEMVFIFDLIKLAEDVP-DVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY----GE 417
A + V++ D++KL+E + + T +L S ILKLG+ D+K LA + G+
Sbjct: 404 AVWDNVYVLDMLKLSEILSEEQWGQLYTDVLSSNEILKLGFGIAEDLKLLAETIKLPGGK 463
Query: 418 LE-----CFKHYEMLLDIQNVFKEPKG--------------------------------- 439
++ C ++ D K P G
Sbjct: 464 VQNVVDLCSFAEKLRCDCPXTIKLPGGKVQNVVDLCSFAEKLRCDCPTLMKPVVPKERGH 523
Query: 440 -GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV--RSCSQPT 496
GLS L +LG LNK + S+WE RPL Q+Q++YAALDA LLQ++ + R+ +Q
Sbjct: 524 KGLSELTRTLLGLPLNKDEQCSDWENRPLRQSQMKYAALDAFCLLQLYEELYKRADAQQI 583
Query: 497 DVSE 500
++ E
Sbjct: 584 NLRE 587
>gi|449283146|gb|EMC89845.1| putative exonuclease mut-7 like protein [Columba livia]
Length = 730
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 96/183 (52%), Gaps = 26/183 (14%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV-----PDVLDSCLTR 390
+VVGID EWKP++ K +VS++Q+A + VF+ DL +L E + L + R
Sbjct: 360 QVVGIDMEWKPSFGMVGK-PRVSLLQLALHDEVFLLDLPRLLEQAVMEAEKEKLPHFIQR 418
Query: 391 ILQSPGILKLGYNFQCDIKQLAHSYGEL-ECFKHYEMLLDIQNVFKE------------- 436
+ I KLGY D+ LA ++ L + K + ++D+ + K+
Sbjct: 419 LYSDAAITKLGYGMSGDLSSLAATWSALKDTDKQAQGVVDLLTIDKQVDVVSPEQSDEDR 478
Query: 437 ----PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSC 492
P+ GLS L + +LG L+KT + SNWE+RPL + Q+ YAA DA LL+I+ + C
Sbjct: 479 GCRQPEKGLSLLVQHVLGKPLDKTEQLSNWEKRPLREEQILYAASDAYCLLEIYEKL--C 536
Query: 493 SQP 495
P
Sbjct: 537 KDP 539
>gi|308802033|ref|XP_003078330.1| 3'-5' exonuclease, putative (ISS) [Ostreococcus tauri]
gi|116056782|emb|CAL53071.1| 3'-5' exonuclease, putative (ISS) [Ostreococcus tauri]
Length = 1013
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 31/208 (14%)
Query: 305 FLHLKELVVEDIIWVDEVDGLHKAICHIEGC-------------KVVGIDCEWKPNYVKG 351
F L + E + WVD+V+GL A + +G+D EW+P
Sbjct: 361 FATLPNVPAERVRWVDDVEGLRAATDAVRALGGSGEASTSARAPPCIGLDAEWRPG---- 416
Query: 352 CKMNKVSIMQIASDEMVFIFDLIKLA-----EDVPDVLDSCLTRILQSPGILKLGYNFQC 406
V+++QIA+ VF+ DL+ A E + D D L +L S + KLG++F
Sbjct: 417 -DNTPVALLQIATRGEVFLVDLLATAPRSAGEALNDATDELLQAVLWSEDVYKLGFSFAY 475
Query: 407 DIKQLAHSYGELECF-KHYEMLLDIQNVF--KEP-----KGGLSGLAEKILGAGLNKTRR 458
DIK++ SY L+ + + + L+D++ + P + GL+ L ++ G L+K +
Sbjct: 476 DIKRMKASYSHLKVWSERSKNLVDVKQLAFASSPSKMSLRCGLAVLTRQVTGFTLDKKEQ 535
Query: 459 NSNWEQRPLSQNQLEYAALDAVVLLQIF 486
S+W +RPL++ Q+ YAA D L IF
Sbjct: 536 CSDWGKRPLTEGQIAYAAADGHSLCLIF 563
>gi|441623909|ref|XP_003279887.2| PREDICTED: probable exonuclease mut-7 homolog [Nomascus leucogenys]
Length = 788
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 111/220 (50%), Gaps = 26/220 (11%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV----PDVLDSCLTRI 391
+VVG+D EW P +V G + + S++Q+A + VF+ D++ L++ + ++
Sbjct: 362 QVVGVDLEWTPVFVAGGR-PRPSLLQVAVEGHVFLLDILALSQPPTGQGAQAFSRLVAQL 420
Query: 392 LQSPGILKLGYNFQCDIKQLAHS-----YGELECFKHYEMLL-----DIQNV----FKEP 437
L P I KLGY D+++L S + E + ++LL + N+
Sbjct: 421 LSDPSITKLGYGMVGDLQKLGTSCPTLAHVEKQILGSIDLLLVHRQMRVANMPAPGMDRA 480
Query: 438 KG--GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQP 495
+G GLS L +++LG L+KT++ SNW++RPL + QL YAA DA LL++ H C +P
Sbjct: 481 RGLRGLSLLVQQVLGTALDKTQQLSNWDRRPLCEEQLIYAAADAYCLLEV--HQALCREP 538
Query: 496 TDVSEGHDKIEWKSYIVSHMDNPKKSKKRPTIKKETESGA 535
D S H + P ++K P + K + S A
Sbjct: 539 ARFHLSEDLA--GSRRPRHRERP-GAQKPPGLPKASASAA 575
>gi|428172826|gb|EKX41732.1| hypothetical protein GUITHDRAFT_112147 [Guillardia theta CCMP2712]
Length = 1559
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 103/198 (52%), Gaps = 26/198 (13%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI-----KLAEDVPDVLD------ 385
+VG+D EWK + G ++++ SI+Q+A + IFDL+ K A D L
Sbjct: 761 LVGLDVEWKAVFKAG-EVSRASILQVAFRRNILIFDLLWMCREKEATKEEDELSRGDGGL 819
Query: 386 ---SCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQN----VFKEPK 438
L +L +P I+KLG++ + D+++L +SY CF LLD+ +
Sbjct: 820 YGGGILHDLLVNPNIIKLGFDLKNDLEKLRNSYPLSSCFLFVSSLLDVSKWSLKLLGRSG 879
Query: 439 GGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDV 498
L + LG L+K + S+WE RPLS+ Q++YAALDA LL +F + PT +
Sbjct: 880 NSLKKTVQACLGKDLDKRMQISDWEARPLSEEQVQYAALDAHCLLSVFDSI-----PT-M 933
Query: 499 SEGHDKIE-WKSYIVSHM 515
E + K+E W+ ++S +
Sbjct: 934 RERNKKLEDWRELVLSSV 951
>gi|391325253|ref|XP_003737153.1| PREDICTED: uncharacterized protein LOC100901281 [Metaseiulus
occidentalis]
Length = 452
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 109/202 (53%), Gaps = 25/202 (12%)
Query: 294 REPEAGFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCK 353
REP G +FL L + + +VD VD A+ ++ C ++G D EWKPN KG
Sbjct: 220 REPSPG----QFLTL-SVPWSSVHFVDTVDSYLDAVEYLNECSILGFDSEWKPN--KGPI 272
Query: 354 MNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAH 413
+++++Q+AS++ VF+FD++ L + + + L I P LKLG++ + D K L
Sbjct: 273 --RMALLQVASEDKVFLFDVMALHKILTFGDWTLLKSIFTDPNKLKLGFDTRDDSKLLED 330
Query: 414 SYGELECFKHYEMLLDIQNVFK-EPK-------------GGLSGLAEKILGAGLNKTRRN 459
G L +M + ++ + K P+ GLS L +LG LNK+++
Sbjct: 331 FMGPLSMSSVTDMGVVMRAMEKLRPECMYQRDGYVFPVVRGLSRLCNILLGRPLNKSKKL 390
Query: 460 S--NWEQRPLSQNQLEYAALDA 479
S NWE+RPL+++ LEYAALDA
Sbjct: 391 SMTNWEKRPLARSSLEYAALDA 412
>gi|348677647|gb|EGZ17464.1| hypothetical protein PHYSODRAFT_351203 [Phytophthora sojae]
Length = 406
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 95/166 (57%), Gaps = 13/166 (7%)
Query: 331 HIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIA-----SDEMVFIFDLIKLAEDVPDVLD 385
+ +++G+D E +P + K N +++QIA E VFI DL +L V +
Sbjct: 42 RLRSAQLMGLDTETRPTWGKTRGPNPCALLQIAVRDASHTEEVFILDLRRLPATV---YN 98
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLA 445
S LT + S I+KLG +F D+K+LA SY + CF + ++++ ++ G + L+
Sbjct: 99 STLTSVFLSKKIIKLGQSFLQDLKELAQSYPQASCFTVCKGVVEVNDLSIALAGAHNPLS 158
Query: 446 -EKI----LGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
+K+ L L KT++ SNWE+RPL+ +QL YAA DA+VL+ ++
Sbjct: 159 LQKLVFFYLHRKLAKTQQMSNWERRPLTASQLHYAAADALVLIHLY 204
>gi|299473129|emb|CBN78705.1| Similarity to ribonuclease D (RNase D) [Ectocarpus siliculosus]
Length = 1260
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 86/179 (48%), Gaps = 29/179 (16%)
Query: 340 IDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI-----KLAEDVPD------------ 382
+DCEW+P V G N V ++Q+A+ E F+ D++ K A D
Sbjct: 673 VDCEWRPARVAGTPANPVCLLQLAAGERTFVVDMLHVCRPKSAAAATDAVEETASGLTKR 732
Query: 383 --VLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK----- 435
+L+ L +L SPG++K+G + D + L SY + CF+ ++++ +V
Sbjct: 733 EALLEEALGAVLGSPGVVKVGLGPKADFQSLIRSYPHMPCFRRVCGVVNLCHVASNASSL 792
Query: 436 -----EPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
+ K LS L +LG L+K+ + S+W RPLS Q YAALDA L + +
Sbjct: 793 RGKPADEKASLSRLCNVVLGKPLDKSEQCSDWGNRPLSGRQKRYAALDARATLLVHREL 851
>gi|303272145|ref|XP_003055434.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463408|gb|EEH60686.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 590
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 98/210 (46%), Gaps = 32/210 (15%)
Query: 304 RFLHLKELVVEDIIWVDEVDGLHKAICHI----------EG-CKVVGIDCEWKPNYVKGC 352
R L + E + WV +V G+ + EG VVG+D EWKP
Sbjct: 80 RGQTLPPVPPERVHWVCDVAGVEAMRAAVLSDERNPTTAEGHPPVVGLDGEWKPG----- 134
Query: 353 KMNKVSIMQIASDEMVFIFDLIKLAE-DVP--DVLDSCLTRILQSPGILKLGYNFQCDIK 409
VSI+Q+A+ F+ DL A D P D LD+ L +L S I KLG++F D+
Sbjct: 135 SRTPVSILQVATRADAFVVDLFATAPPDAPASDALDAFLADLLGSERIYKLGFSFGYDLS 194
Query: 410 QLAHSYGELECFK------HYEMLLDIQNVFK-------EPKGGLSGLAEKILGAGLNKT 456
++ SY L + ++D++ V + GL+ L + LGA L+K
Sbjct: 195 RMRASYPHLRSLRVGAGHPQPRAMIDVKQVANVASANRMNTRVGLATLTKFTLGATLSKA 254
Query: 457 RRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
+ S+W +RPL+ QL YAA DA L IF
Sbjct: 255 EQCSDWSRRPLTAAQLSYAAADAFYLCVIF 284
>gi|119608788|gb|EAW88382.1| hypothetical protein FLJ20433, isoform CRA_b [Homo sapiens]
Length = 390
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 110/226 (48%), Gaps = 30/226 (13%)
Query: 330 CHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV----PDVLD 385
CH +VVG+D EW P +V G + + S++Q+A + VF+ D++ L++
Sbjct: 72 CH----QVVGVDVEWTPVFVAGGR-PRPSLLQVAVEGHVFLLDVLALSQPPTGQGAQAFS 126
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHS-----YGELECFKHYEMLL--DIQNVFKEPK 438
+ ++L P I KLGY D+++L S + E + ++LL V P
Sbjct: 127 RLVAQLLSDPSITKLGYGMVGDLQKLGTSCPALAHVEKQILGGMDLLLVHRQMRVASVPA 186
Query: 439 G---------GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
GLS L +++LG L+KT++ SNW++RPL + Q+ YAA DA LL++ H
Sbjct: 187 PAVDRARELRGLSLLVQQVLGTALDKTQQLSNWDRRPLYEEQVIYAAADAYCLLEV--HQ 244
Query: 490 RSCSQPTDVSEGHDKIEWKSYIVSHMDNPKKSKKRPTIKKETESGA 535
C +P D S H + P ++K P ++K + A
Sbjct: 245 ALCREPARFHLSEDLA--GSRRPRHRERP-GARKPPGLQKASAPAA 287
>gi|242022456|ref|XP_002431656.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212516964|gb|EEB18918.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 734
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 99/188 (52%), Gaps = 18/188 (9%)
Query: 315 DIIWVDEVDGLHKAICHI-EGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDL 373
+I +D K + I +G KVVG+D EWKP + G K +++++ QIA+ +V++ D+
Sbjct: 355 NIYLIDSTCSFSKFLIDITDGVKVVGLDAEWKPCF--GLKKSELALFQIATRHVVYLLDI 412
Query: 374 IKLAEDVPDVLDSCLTRIL-QSPGILKLGYNFQCDIKQLAHSYGELECFKHYEM-LLDIQ 431
I L+ VP+ L + IL +P ILKLG+ Q D + L E LLD++
Sbjct: 413 IALSSVVPENLWIRFSEILFGNPNILKLGFGLQGDFTIIQEKLLGLHGIIIPETSLLDLE 472
Query: 432 --------NVFKEPKGG-----LSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALD 478
N F P L+ E LG L+K+ + S+WE+RPL +Q+ YAALD
Sbjct: 473 ILWRVLQNNNFTFPHAASVSSTLNSFIEFCLGEKLDKSNQFSDWEKRPLRHSQIVYAALD 532
Query: 479 AVVLLQIF 486
A LL+ +
Sbjct: 533 AYCLLEAY 540
>gi|326435716|gb|EGD81286.1| hypothetical protein PTSG_11323 [Salpingoeca sp. ATCC 50818]
Length = 1526
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 81/143 (56%), Gaps = 11/143 (7%)
Query: 350 KGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIK 409
+G + +VSI+QIA + + I D++ L P + +T + P I+K+G+ F D+K
Sbjct: 648 EGKQKQRVSILQIARHDALVILDMLALE---PAHFHAFVTDLFADPAIIKVGFAFDGDMK 704
Query: 410 QLAHSYGELECFKHYEMLLDIQNVFKE------PK-GGLSGLAEKILGAGLNKTRRNSNW 462
L ++ + ECF LLD+Q+ F+ PK GGL L + L+KT + SNW
Sbjct: 705 MLRKTFPDAECFSTLRSLLDLQS-FRHALTSAGPKSGGLKELVRHFMHKPLDKTEQMSNW 763
Query: 463 EQRPLSQNQLEYAALDAVVLLQI 485
+RPL+ +QL YAALDA V + +
Sbjct: 764 NRRPLTPSQLHYAALDAHVCVSL 786
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 10/118 (8%)
Query: 239 LKRLAEKACWDIAEAKTKGDKRLLEYLVYLAMEAGYSEKVDELCERYSLEGFLKTREPEA 298
++ K +D+A G+ L Y++ + ++ G+ K + C + LE + +
Sbjct: 456 IEHFVSKNLFDLAAVAATGNIDLRTYMIDMLVQRGHIGKAHDYCRMWGLESDCNIDDDKL 515
Query: 299 GFVHSR----FLHLKELVVEDIIWVDEVDGLHKA----ICHIEGCKV--VGIDCEWKP 346
H R FL L + + + +++V + GL A + +V VG+DCEW+P
Sbjct: 516 KAFHIRRAREFLTLPQHLYDSLLFVQDAAGLAAAREVLLRPWPDARVALVGLDCEWRP 573
>gi|145344201|ref|XP_001416625.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576851|gb|ABO94918.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 614
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 129/280 (46%), Gaps = 37/280 (13%)
Query: 239 LKRLAEKACWDIAEAKTKGDKRLLEYLVYLAMEAGYSEKVDELCERYSLEGFLKTREPEA 298
+ R+ K +++A + + L E++V E E R LE E E
Sbjct: 311 IARMIAKGQFEVALKRAGAEINLQEFVVESLAAIEQFEYALEFANRCGLEFDCDPVELEK 370
Query: 299 GFVHSR--FLHLKELVVED--IIWVDEVDGLHK-AICHIEGCKVVGIDCEWKPNYVKGCK 353
R F L E + D +++VD+ LH + ++ K +GID EW +
Sbjct: 371 LVARRRATFFQLPEHLSLDANVVFVDDAKSLHYISERYLANKKDIGIDTEWGAAVGEDAD 430
Query: 354 ---MNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQ 410
++V+ +Q+AS++ V I DL L + P+ L++ + R+ Q +LKLG+ Q D+++
Sbjct: 431 KEDTSQVATLQLASEDGVAILDLPVLVQSCPEALEATIGRMFQDDKVLKLGFAVQEDLRR 490
Query: 411 LAHSYGELECFKHYEMLLDIQNVFK--------------------------EPKGGLSGL 444
LA + F + + D+Q+++K +P G LS +
Sbjct: 491 LAKCHPA--SFGNVRNVADLQSLWKLAVSKARMTKETRDFPWATDEELSRYQPVG-LSTM 547
Query: 445 AEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQ 484
+LG L+KT R S+W +RPL+ Q YAALDA L++
Sbjct: 548 VAAVLGKPLDKTMRMSDWSKRPLTAQQRVYAALDAWTLVE 587
>gi|357436407|ref|XP_003588479.1| hypothetical protein MTR_1g007660 [Medicago truncatula]
gi|355477527|gb|AES58730.1| hypothetical protein MTR_1g007660 [Medicago truncatula]
Length = 512
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 91/169 (53%), Gaps = 22/169 (13%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIA----SDEMVFIFDLIKLAEDVPDVLDSCLTRIL 392
+VG+D EWKP VS++QIA DE+VF+ DLI L + + + L +L
Sbjct: 34 LVGLDAEWKPVRTHQNSFPTVSLLQIACQLGDDEVVFLLDLISLP--LSSIWEP-LREML 90
Query: 393 QSPGILKLGYNFQCDIKQLAHSYGELEC---FKHYEMLLDIQNVFKE---PKGG------ 440
S ILKLG+ F+ D+ L+ ++ E C F E LDI +V+ K G
Sbjct: 91 VSADILKLGFRFKQDLVYLSSTFCEQGCNPGFDKVEPYLDITSVYNHLQFKKNGRIASKQ 150
Query: 441 ---LSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
LS + ++LG L+K + S+W QRPL++ Q+ YAA+DA LL IF
Sbjct: 151 NKSLSTICGELLGITLSKELQCSDWSQRPLTEEQMTYAAMDAHCLLGIF 199
>gi|21753501|dbj|BAC04356.1| unnamed protein product [Homo sapiens]
Length = 758
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 110/226 (48%), Gaps = 30/226 (13%)
Query: 330 CHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV----PDVLD 385
CH +VVG+D EW P +V G + + S++Q+A + VF+ D++ L++
Sbjct: 392 CH----QVVGVDVEWTPVFVAGGR-PRPSLLQVAVEGHVFLLDVLALSQPPTGQGAQAFS 446
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHS-----YGELECFKHYEMLL--DIQNVFKEPK 438
+ ++L P I KLGY D+++L S + E + ++LL V P
Sbjct: 447 RLVAQLLSDPSITKLGYGMVGDLQKLGTSCPALAHVEKQILGGMDLLLVHRQMRVASVPA 506
Query: 439 G---------GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
GLS L +++LG L+KT++ SNW++RPL + Q+ YAA DA LL++ H
Sbjct: 507 PAVDRARELRGLSLLVQQVLGTALDKTQQLSNWDRRPLYEEQVIYAAADAYCLLEV--HQ 564
Query: 490 RSCSQPTDVSEGHDKIEWKSYIVSHMDNPKKSKKRPTIKKETESGA 535
C +P D S H + P ++K P ++K + A
Sbjct: 565 ALCREPARFHLSEDLA--GSRRPRHRERP-GARKPPGLQKASAPAA 607
>gi|168037922|ref|XP_001771451.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677178|gb|EDQ63651.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 565
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 105/213 (49%), Gaps = 40/213 (18%)
Query: 314 EDIIWVD--EVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIA-------- 363
E I++VD + + +E +V +D EWKP G +VSIMQI+
Sbjct: 28 ERILFVDSPRTEEFEVFLIALEEAMIVAMDAEWKPVRRAGVS-PRVSIMQISCRIRKDEF 86
Query: 364 --SDEMVFIFDLIKL-AEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELE- 419
+E++F+ DL+ L A D L + +L SP ILKLG+ F+ D L+ S+ E
Sbjct: 87 ITGEEVIFVLDLLALSAADFAFPLKT----MLCSPRILKLGFAFKQDQLHLSASFPGPEA 142
Query: 420 --CFKHYEMLLDIQNVFKE----------PKG---------GLSGLAEKILGAGLNKTRR 458
CF E +DI ++KE KG L+ +++ +LG L K +
Sbjct: 143 NGCFDKVEPYIDIAKLYKEFLHVNFSNLKHKGKRFVLGGTHSLTAISKAVLGHPLCKDAQ 202
Query: 459 NSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
SNWEQRPLSQ+Q+ YAA D LL +F + S
Sbjct: 203 CSNWEQRPLSQDQILYAAADTHCLLALFDTLLS 235
>gi|145279204|ref|NP_060290.3| probable exonuclease mut-7 homolog [Homo sapiens]
gi|308153580|sp|Q8N9H8.3|MUT7_HUMAN RecName: Full=Probable exonuclease mut-7 homolog; AltName:
Full=Exonuclease 3'-5' domain-containing protein 3
Length = 876
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 110/226 (48%), Gaps = 30/226 (13%)
Query: 330 CHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV----PDVLD 385
CH +VVG+D EW P +V G + + S++Q+A + VF+ D++ L++
Sbjct: 392 CH----QVVGVDVEWTPVFVAGGR-PRPSLLQVAVEGHVFLLDVLALSQPPTGQGAQAFS 446
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHS-----YGELECFKHYEMLL--DIQNVFKEPK 438
+ ++L P I KLGY D+++L S + E + ++LL V P
Sbjct: 447 RLVAQLLSDPSITKLGYGMVGDLQKLGTSCPALAHVEKQILGGMDLLLVHRQMRVASVPA 506
Query: 439 G---------GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
GLS L +++LG L+KT++ SNW++RPL + Q+ YAA DA LL++ H
Sbjct: 507 PAVDRARELRGLSLLVQQVLGTALDKTQQLSNWDRRPLCEEQVIYAAADAYCLLEV--HQ 564
Query: 490 RSCSQPTDVSEGHDKIEWKSYIVSHMDNPKKSKKRPTIKKETESGA 535
C +P D S H + P ++K P ++K + A
Sbjct: 565 ALCREPARFHLSEDLA--GSRRPRHRERP-GARKPPGLQKASAPAA 607
>gi|397492286|ref|XP_003817058.1| PREDICTED: probable exonuclease mut-7 homolog [Pan paniscus]
Length = 878
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 110/226 (48%), Gaps = 30/226 (13%)
Query: 330 CHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV----PDVLD 385
CH +VVG+D EW P +V G + + S++Q+A + VF+ D++ L++
Sbjct: 392 CH----QVVGVDLEWTPVFVAGGR-PRPSLLQVAVEGHVFLLDVLALSQPPTGQGAQAFS 446
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHS-----YGELECFKHYEMLL--DIQNVFKEPK 438
+ ++L P I KLGY D+++L S + E + ++LL V P
Sbjct: 447 RLVAQLLSDPSITKLGYGMVEDLQKLGTSCPALAHVEKQILGGIDLLLVHRQMRVASVPA 506
Query: 439 GG---------LSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
G LS L +++LG L+KT++ SNW++RPL Q Q+ YAA DA LL++ H
Sbjct: 507 PGVDRARELRGLSLLVQQVLGTALDKTQQLSNWDRRPLCQEQVIYAAADAYCLLEV--HQ 564
Query: 490 RSCSQPTDVSEGHDKIEWKSYIVSHMDNPKKSKKRPTIKKETESGA 535
C +P D S H + P ++K P ++K + A
Sbjct: 565 ALCREPARFCLSEDLA--GSRRPRHRERP-GAQKPPGLQKASAPAA 607
>gi|307176637|gb|EFN66105.1| Probable exonuclease mut-7-like protein [Camponotus floridanus]
Length = 1053
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 99/185 (53%), Gaps = 20/185 (10%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRI 391
++ +VGID EWKP++ G K +++++QIA+++ V+I D+ L ++P++ +
Sbjct: 397 LKNVTIVGIDLEWKPSF--GTKQPELALIQIATEDNVYILDVTTLGNELPELWVELGLTL 454
Query: 392 LQSPGILKLGYNFQCDIKQLAHSYGELECFK-HYEMLLDIQNVFKE---------PKGG- 440
+ I+K+G+ DI + +S L K H + LD+ ++++ P G
Sbjct: 455 FGNKNIVKIGFGIAHDITVIRNSIPALSSIKNHGQGYLDLMILWRKLTEDYNFIFPYKGD 514
Query: 441 -------LSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCS 493
LS L E G L+K+ + SNWE RPL ++Q+ YAALDA LL+I+ + S
Sbjct: 515 PNFTSKSLSKLVELCFGQRLDKSDQFSNWELRPLRESQIIYAALDAYCLLEIYKVLADYS 574
Query: 494 QPTDV 498
D+
Sbjct: 575 ADMDI 579
>gi|301095852|ref|XP_002897025.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108454|gb|EEY66506.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 414
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 94/163 (57%), Gaps = 13/163 (7%)
Query: 334 GCKVVGIDCEWKPNYVKGCKMNKVSIMQIA-----SDEMVFIFDLIKLAEDVPDVLDSCL 388
+V+G D E +P + K + N +++QIA E VFI DL+ L+ V ++ L
Sbjct: 42 NAQVMGFDTETRPIWSKHQRRNPCALLQIAVRDANQKEEVFILDLLHLS---AKVYNTTL 98
Query: 389 TRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLA-EK 447
T + S ++KLG +F D+++LA SY + CF + ++++ ++ G + L+ +K
Sbjct: 99 TNVFLSKTVVKLGQSFYQDLQELAESYPQASCFTVCKGVVEVNDLSISLAGAHNPLSLQK 158
Query: 448 I----LGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
+ L L KT++ SNW +RPL+ +QL YAA DA+VL+ ++
Sbjct: 159 LVFFYLHHKLTKTQQMSNWARRPLTPSQLHYAAADALVLIHLY 201
>gi|119608789|gb|EAW88383.1| hypothetical protein FLJ20433, isoform CRA_c [Homo sapiens]
Length = 876
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 110/226 (48%), Gaps = 30/226 (13%)
Query: 330 CHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV----PDVLD 385
CH +VVG+D EW P +V G + + S++Q+A + VF+ D++ L++
Sbjct: 392 CH----QVVGVDVEWTPVFVAGGR-PRPSLLQVAVEGHVFLLDVLALSQPPTGQGAQAFS 446
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHS-----YGELECFKHYEMLL--DIQNVFKEPK 438
+ ++L P I KLGY D+++L S + E + ++LL V P
Sbjct: 447 RLVAQLLSDPSITKLGYGMVGDLQKLGTSCPALAHVEKQILGGMDLLLVHRQMRVASVPA 506
Query: 439 G---------GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
GLS L +++LG L+KT++ SNW++RPL + Q+ YAA DA LL++ H
Sbjct: 507 PAVDRARELRGLSLLVQQVLGTALDKTQQLSNWDRRPLYEEQVIYAAADAYCLLEV--HQ 564
Query: 490 RSCSQPTDVSEGHDKIEWKSYIVSHMDNPKKSKKRPTIKKETESGA 535
C +P D S H + P ++K P ++K + A
Sbjct: 565 ALCREPARFHLSEDLA--GSRRPRHRERP-GARKPPGLQKASAPAA 607
>gi|16549645|dbj|BAB70838.1| unnamed protein product [Homo sapiens]
Length = 599
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 110/226 (48%), Gaps = 30/226 (13%)
Query: 330 CHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV----PDVLD 385
CH +VVG+D EW P +V G + + S++Q+A + VF+ D++ L++
Sbjct: 115 CH----QVVGVDVEWTPVFVAGGR-PRPSLLQVAVEGHVFLLDVLALSQPPTGQGAQAFS 169
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHS-----YGELECFKHYEMLL--DIQNVFKEPK 438
+ ++L P I KLGY D+++L S + E + ++LL V P
Sbjct: 170 RLVAQLLSDPSITKLGYGMVGDLQKLGTSCPALAHVEKQILGGMDLLLVHRQMRVASVPA 229
Query: 439 G---------GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
GLS L +++LG L+KT++ SNW++RPL + Q+ YAA DA LL++ H
Sbjct: 230 PAVDRARELRGLSLLVQQVLGTALDKTQQLSNWDRRPLYEEQVIYAAADAYCLLEV--HQ 287
Query: 490 RSCSQPTDVSEGHDKIEWKSYIVSHMDNPKKSKKRPTIKKETESGA 535
C +P D S H + P ++K P ++K + A
Sbjct: 288 ALCREPARFHLSEDLA--GSRRPRHRERP-GARKPPGLQKASAPAA 330
>gi|340716154|ref|XP_003396566.1| PREDICTED: probable exonuclease mut-7 homolog [Bombus terrestris]
Length = 943
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 90/173 (52%), Gaps = 20/173 (11%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRI 391
++ +VGID EWKP + G K ++++QIA+ V+I D+ + + ++ +
Sbjct: 419 LKDVSIVGIDLEWKPCF--GTKQTGLALIQIATKANVYILDVTTIGNKLTELWIKLSKAL 476
Query: 392 LQSPGILKLGYNFQCDIKQLAHSYGELECFK-HYEMLLDIQNVFKE-------------- 436
++ ILKLG+ D+ + +S K + LDI +++K+
Sbjct: 477 FENRNILKLGFGIAQDVTVIRNSLSAFSKIKISGQGYLDIVHLWKKLVEDYKFVFPHESD 536
Query: 437 ---PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
K LS L E LG LNK+ + SNWEQRPL ++Q+ YAALDA LL+I+
Sbjct: 537 EQFTKKNLSKLVELCLGQKLNKSDQFSNWEQRPLRESQIIYAALDAYCLLEIY 589
>gi|350396853|ref|XP_003484688.1| PREDICTED: probable exonuclease mut-7 homolog [Bombus impatiens]
Length = 942
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 91/176 (51%), Gaps = 26/176 (14%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRI 391
+ +VGID EWKP + G K +++++QIA+ V+I D+ + + ++ +
Sbjct: 418 LRDVSIVGIDLEWKPCF--GTKQTELALIQIATKANVYILDVTTIGNKLIELWIKLSKAL 475
Query: 392 LQSPGILKLGYNFQCDIKQLAHSYGELE----CFKHYEMLLDIQNVFKE----------- 436
++ ILKLG+ DI + +S C + Y LDI +++K+
Sbjct: 476 FENRNILKLGFGIAQDITVIRNSLPAFSKIKICGQGY---LDIVHLWKKLVEDYKFVFPH 532
Query: 437 ------PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
K LS L E LG LNK+ + SNWEQRPL ++Q+ YAALDA LL+I+
Sbjct: 533 ESDEQFTKKNLSKLVELCLGQKLNKSDQFSNWEQRPLRESQIIYAALDAYCLLEIY 588
>gi|22759879|dbj|BAC10986.1| HBE269 [Homo sapiens]
Length = 514
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 110/226 (48%), Gaps = 30/226 (13%)
Query: 330 CHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV----PDVLD 385
CH +VVG+D EW P +V G + + S++Q+A + VF+ D++ L++
Sbjct: 72 CH----QVVGVDVEWTPVFVAGGR-PRPSLLQVAVEGHVFLLDVLALSQPPTGQGAQAFS 126
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHS-----YGELECFKHYEMLL--DIQNVFKEPK 438
+ ++L P I KLGY D+++L S + E + ++LL V P
Sbjct: 127 RLVAQLLSDPSITKLGYGMVGDLQKLGTSCPALAHVEKQILGGMDLLLVHRQMRVASVPA 186
Query: 439 G---------GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
GL+ L +++LG L+KT++ SNW++RPL + Q+ YAA DA LL++ H
Sbjct: 187 PAVDRARELRGLTLLVQQVLGTALDKTQQLSNWDRRPLYEEQVIYAAADAYCLLEV--HQ 244
Query: 490 RSCSQPTDVSEGHDKIEWKSYIVSHMDNPKKSKKRPTIKKETESGA 535
C +P D S H + P ++K P ++K + A
Sbjct: 245 ALCREPARFHLSEDLA--GSRRPRHRERP-GARKPPGLQKASAPAA 287
>gi|403357653|gb|EJY78455.1| 3'-5' exonuclease family protein [Oxytricha trifallax]
Length = 678
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
K +G+D EW+P K S+ QI+ + ++ D + L LD L+ +
Sbjct: 358 KYIGVDSEWRPQLTK-FHNTAPSLFQISGAKSAYLIDFVSLKHSA--YLDKKLSDLFSHE 414
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK-----EPKGGLSGLAEKILG 450
+ +G++F D++Q A + L+ ++ + +D Q F P GL+ ++EK+ G
Sbjct: 415 AVCIVGFSFNSDVEQFARKFPNLKFYRFIKNFIDAQYYFSVVTLSPPMTGLAKVSEKVFG 474
Query: 451 AGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSEGHDKI 505
+ K + SNWE+RPL +Q Y ALDA +L+ + + + P + + + K+
Sbjct: 475 KPICKREQMSNWERRPLRLSQQHYGALDAFILVDLINKLAEDGHPKNSIDKYIKV 529
>gi|301091688|ref|XP_002896023.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262095658|gb|EEY53710.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 575
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 105/244 (43%), Gaps = 66/244 (27%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCK---MNKVSIMQIASDEMVFIF 371
+I++VD L + + H+ +G D EWK + K +++Q+AS E F+
Sbjct: 324 NIVFVDTPTALQQCVGHLIEQPAIGFDSEWKAVHEVASSEGTAAKCALLQLASREKAFVV 383
Query: 372 DLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQL-AHSYGELECFKHYEMLLDI 430
D++ L E + L + QS ++KLG++ + D+K L + G ML+D+
Sbjct: 384 DVVALIEH-----GNILLPLFQSESVIKLGFDTRGDVKALRSFLTGNYTAENVMSMLVDL 438
Query: 431 QNVFK----------EPKGG---------------------------------------- 440
Q V + E KGG
Sbjct: 439 QAVTRKLPTQKGTKVEVKGGDGSSSNANTLVANSEATGTETRSRKWKHTRSKASENDASA 498
Query: 441 ------LSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQ 494
L+ +A LG L+K R SNWE+RPL+Q QL YAALDA VL+QI++ ++
Sbjct: 499 NSSRLGLAAIAATYLGLPLDKRARMSNWERRPLTQAQLHYAALDAHVLVQIYYKMQE-QH 557
Query: 495 PTDV 498
P DV
Sbjct: 558 PVDV 561
>gi|332030729|gb|EGI70405.1| Putative exonuclease mut-7-like protein [Acromyrmex echinatior]
Length = 955
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 113/215 (52%), Gaps = 24/215 (11%)
Query: 292 KTREPEAGFVHSRFLHLKELVVEDIIWVDEVDGLHKAICH-IEGCKVVGIDCEWKPNYVK 350
KT EP V+ H+ +L E+I VD + + + + +VGID EWKP++
Sbjct: 321 KTWEPSEDNVN---YHILKLPRENIKLVDNGRLFEEFLDNGLRDVNIVGIDLEWKPSF-- 375
Query: 351 GCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQ 410
G K ++++MQ+A+++ V+I D+ + + + ++ + + + I+K+G+ D+
Sbjct: 376 GTKQPELALMQVATEDNVYILDVTTIGDKLLELWNELGLVLFGNKDIIKIGFGIAQDMTV 435
Query: 411 LAHSYGELECFK-HYEMLLDIQNVFKE---------PKGG--------LSGLAEKILGAG 452
+ +S L K H + LD+ ++++ P G LS L E G
Sbjct: 436 IRNSLPALSSIKTHGQGYLDLMLLWRKLVEEYNFVFPYKGDPNFTNRSLSKLVELCFGQR 495
Query: 453 LNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
L+K+ + SNWE RPL ++Q+ YAALDA LL+I++
Sbjct: 496 LDKSDQFSNWELRPLRESQIIYAALDAYCLLEIYN 530
>gi|449477771|ref|XP_002190738.2| PREDICTED: probable exonuclease mut-7 homolog [Taeniopygia guttata]
Length = 837
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 103/220 (46%), Gaps = 37/220 (16%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV-----PDVLDSCLTR 390
+VVG+D EWKP++ K +V+++Q+A + VF+ DL +L E + L +
Sbjct: 387 QVVGVDMEWKPSFGMVGK-PRVALLQLALKDEVFLLDLPQLLEQAETEGEKEKLPHFIQM 445
Query: 391 ILQSPGILKLGYNFQCDIKQLAHSYGEL-ECFKHYEMLLDI------------------- 430
+ I KLGY D+ LA + L + K + ++D+
Sbjct: 446 LYSDATITKLGYGMSGDLSSLAATCSTLKDTEKQMQGVVDLLAVDKQLQWGKDSRKVDGL 505
Query: 431 -------QNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLL 483
Q ++P+ GLS L + +LG L+KT + SNWE+RPL + Q+ YAA DA LL
Sbjct: 506 SPEHSHEQRGVRQPEKGLSLLVQHVLGKPLDKTEQLSNWEKRPLREEQILYAASDAYCLL 565
Query: 484 QIFHHVRSCSQPTDVSEGHDKIEWKSYIVSHMDNPKKSKK 523
+I+ R C P G D + S + P+ K+
Sbjct: 566 EIYE--RLCKDPESFGLGSDLTD--SLVGKQSKKPRAKKQ 601
>gi|167536930|ref|XP_001750135.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771297|gb|EDQ84965.1| predicted protein [Monosiga brevicollis MX1]
Length = 1125
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 8/163 (4%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
++G+D EWKP + V+I+Q+A+ + + I D + L D L ++
Sbjct: 466 ILGLDSEWKPRTLSHAD-EPVAILQLATRDALVILDTLALPSSS---YDPWLLQLWTDET 521
Query: 397 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK----EPKGGLSGLAEKILGAG 452
++K G+ F+ D+ +L HS CF+ +++++ K + L L + G
Sbjct: 522 VVKTGFAFKGDMTKLRHSAPSARCFEALHAFVELEHAAKAYCADWGASLGSLTATVFGRH 581
Query: 453 LNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQP 495
LNK R S+W QRPL++ QL YAALDA + +++ + + P
Sbjct: 582 LNKVDRMSDWSQRPLTKRQLHYAALDAWICVKLLERLLTEPGP 624
>gi|301100864|ref|XP_002899521.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262103829|gb|EEY61881.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1101
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 94/183 (51%), Gaps = 33/183 (18%)
Query: 338 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGI 397
+G+D EW+P+ + +K SI+Q+A D+ VFIFD +++A + D L+ + S I
Sbjct: 922 LGLDAEWRPDS-RATVPSKCSILQVACDDYVFIFDFMEMA--IGD-LEELFEHLFTSDTI 977
Query: 398 LKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQ-NVF---------------------- 434
+K+G+ DIK+L S+ E++CF + +LD + F
Sbjct: 978 VKIGFAINGDIKRLRWSFPEVKCFDTFVNVLDFSFDTFVATTHLADGTIIPTQSDDTSSL 1037
Query: 435 ------KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHH 488
+ + GLS ++ L L+K ++ S+WE+RPL+ Q+ YAALDA LL +
Sbjct: 1038 DKLQRRRRRQKGLSTYIKQALELPLSKLQQKSDWERRPLTTQQVGYAALDAYCLLMLQDA 1097
Query: 489 VRS 491
V S
Sbjct: 1098 VAS 1100
>gi|307103312|gb|EFN51573.1| hypothetical protein CHLNCDRAFT_140064 [Chlorella variabilis]
Length = 969
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 92/184 (50%), Gaps = 24/184 (13%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKL-AEDVPDVLDSCLTRILQSP 395
V+G+D EW+P+ G + S++QI++D V++ DL+ L + D L + + +L S
Sbjct: 427 VLGLDLEWQPD---GENSSPPSLLQISTDAEVWLVDLLALTGREAGDALAAAIVPVLSSD 483
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK----EPKG------------ 439
+ KLG D ++LA + F LD+ +++ E G
Sbjct: 484 RVYKLGCGIASDFRKLARHHPA--AFSLARGCLDLSTLWRSCHIEQTGKRSTAGYKKRVG 541
Query: 440 --GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
LS LA+ +LG L+K+++ S+W +RPLS QLEYAALDA + IF + P
Sbjct: 542 EVSLSVLAQSVLGKPLDKSQQVSDWGRRPLSSQQLEYAALDAHAAVLIFRGMGQLHHPYR 601
Query: 498 VSEG 501
+G
Sbjct: 602 TRQG 605
>gi|403301404|ref|XP_003941380.1| PREDICTED: probable exonuclease mut-7 homolog [Saimiri boliviensis
boliviensis]
Length = 874
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 26/220 (11%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPD----VLDSCLTRI 391
+VV +D EW P +V G + + S++Q+A + VF+ D+ L + +T++
Sbjct: 394 QVVAVDLEWTPVFVAGGR-PRPSLLQVAMEGHVFLLDIQALTQPPAGQGARAFSQLVTQL 452
Query: 392 LQSPGILKLGYNFQCDIKQLAHS-----YGELECFKHYEMLL--------DIQNVFKEPK 438
L P I KLGY D+++L S + E + ++LL + +
Sbjct: 453 LSDPSITKLGYGMAGDLQKLGTSCPALAHVEKQVLGGVDLLLVHRQMRVAGMPTPGVDGA 512
Query: 439 GGLSGLA---EKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQP 495
GGL GL+ +++LG L+KT++ SNW++RPL + +L YAA DA LL++ H C +P
Sbjct: 513 GGLRGLSLLVQQVLGTTLDKTQQLSNWDRRPLCEEKLIYAAADAYCLLEV--HQALCREP 570
Query: 496 TDVSEGHDKIEWKSYIVSHMDNPKKSKKRPTIKKETESGA 535
D S H + P +++ P+++ + S A
Sbjct: 571 ARFHLSGDLA--GSQRPRHRERP-GTEEPPSLQDASASAA 607
>gi|348687566|gb|EGZ27380.1| hypothetical protein PHYSODRAFT_321189 [Phytophthora sojae]
Length = 337
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 96/210 (45%), Gaps = 39/210 (18%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS---IMQIASDEMVFIF 371
+I++V L ++ VVG D EWK V N + ++Q+AS + F+
Sbjct: 112 NIVFVGAPKALRSCAQYLMKQPVVGFDAEWKAIRVCAEPNNPTAPCALIQLASRDKAFVV 171
Query: 372 DLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFK-HYEMLLDI 430
D+++L+ D L + QS +LKLG+N D+K E K L+D+
Sbjct: 172 DMVELSGH-----DHILAPLFQSDQVLKLGFNPTGDVKVFRPLLAEGGTTKFSITALVDL 226
Query: 431 QNVFKEPKG------------------------------GLSGLAEKILGAGLNKTRRNS 460
Q V + +G GLS +AE LG L+K R S
Sbjct: 227 QAVARNLRGSGSSVNSNNPYAGCGDDNNCSTTGNEAFKEGLSAVAETYLGLPLDKRVRMS 286
Query: 461 NWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
+WE RPL++ QL YAALDA VLLQI+ ++
Sbjct: 287 DWEGRPLTRAQLHYAALDAHVLLQIYDKMQ 316
>gi|346227088|ref|ZP_08848230.1| 3'-5' exonuclease [Anaerophaga thermohalophila DSM 12881]
gi|346227138|ref|ZP_08848280.1| 3'-5' exonuclease [Anaerophaga thermohalophila DSM 12881]
Length = 192
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 95/177 (53%), Gaps = 23/177 (12%)
Query: 327 KAICHI----EGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPD 382
K I H+ +++G D E KP++ KG + V+++Q++++E F+F L
Sbjct: 29 KQITHVVEKLRNERIIGFDTETKPSFKKGVSHD-VALLQLSTEEEAFLFRLNMTG----- 82
Query: 383 VLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGG-- 440
+ LT++L +PGI K+G + D++ L H L F E +DIQ + PK G
Sbjct: 83 -FNGALTQLLSNPGIKKVGVGIRDDLRGLQH----LNNFTP-EGFIDIQEL--APKYGIE 134
Query: 441 ---LSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQ 494
L LA +LG ++K +R SNWE LS+ Q+ YAA DA V L+I++ ++ +
Sbjct: 135 VLSLKDLAGLLLGIRISKRQRLSNWEADSLSEGQILYAATDAWVALKIYNKIKKMKR 191
>gi|405964657|gb|EKC30115.1| Putative exonuclease mut-7-like protein [Crassostrea gigas]
Length = 737
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 140/327 (42%), Gaps = 68/327 (20%)
Query: 210 GESFLLKMIQNKEF----KAAEKWATFMGKPILLKRLAEKACWDIAEAKTKGDKRLLEYL 265
E+ L++++ ++ K+A KWA F P EK + E + KRL E
Sbjct: 175 NETLQLELVEQLQWYNDAKSAAKWANFYKIP------DEKLSHPVIEER----KRLAEGP 224
Query: 266 VYLAMEAGYSEKVDELCERYSLEGFLKTREPEAGFVHSRFLHLKELVVEDIIWVDEVDGL 325
G E ++ E S++G + + L I VD +
Sbjct: 225 TSAPAAVGGEESWED--ELMSVDGM------------DAYYYKLNLDPSSIQLVDTKEKY 270
Query: 326 HKAICHIEGCKV-VGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVL 384
H+ I + + +G+D EWKP++ G ++++MQ A+ + +F+ D+I L +
Sbjct: 271 HECISRLSRPGLTIGVDSEWKPSF--GNTTQRIALMQFATSDQIFLLDMITLHSLLHKSD 328
Query: 385 DSCLTRILQ-SPGILKLGYNFQCDIKQLAHSYGEL-ECFKHYEMLLDIQ----------- 431
L L + ++KLGY F D+K + +Y L E H + +D++
Sbjct: 329 WFLLANALFCNEEMIKLGYGFDSDLKMVVKTYPFLKEPLTHLKRTVDLEKLAAKVIDKAI 388
Query: 432 NVFKEPKG------------------------GLSGLAEKILGAGLNKTRRNSNWEQRPL 467
N+ + G GLS L + G LNK + S+WE+RPL
Sbjct: 389 NLMPDTVGDSDDEGLEDKDSGVNVKFQAVEQRGLSELVRQCFGKPLNKGEQMSDWERRPL 448
Query: 468 SQNQLEYAALDAVVLLQIFHHVRSCSQ 494
Q++YAALDA VLL+++ ++ ++
Sbjct: 449 RNTQIQYAALDAFVLLEVYERLKETAK 475
>gi|260802943|ref|XP_002596351.1| hypothetical protein BRAFLDRAFT_215559 [Branchiostoma floridae]
gi|229281606|gb|EEN52363.1| hypothetical protein BRAFLDRAFT_215559 [Branchiostoma floridae]
Length = 503
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 27/177 (15%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVP-DVLDSCLTRILQSP 395
+VG+D EW+P++ +VSI+Q+A + V+I D+I L ++ L + +L S
Sbjct: 36 MVGLDAEWRPSFGNTLITQRVSIVQLAIKDKVYILDMIALVQNTEMGKLQDFFSSLLASQ 95
Query: 396 GILKLGYNFQCDIKQLAHSYGEL-ECFKHYEMLLDIQNVFKEPKG--------------- 439
++ +GY D + L SY L E + ++D+ +V K
Sbjct: 96 DVIIIGYGIDGDFQMLGRSYPFLREALSKRKSVIDLSHVHKANPALLTFDAGETTDDDFT 155
Query: 440 ----------GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
GLS L ++ LG L KT + S+WE+RPL + Q+ YA+LDA LL+++
Sbjct: 156 GEASAKSDAHGLSQLVQQCLGLPLAKTEQLSDWERRPLRKAQILYASLDAYCLLEVY 212
>gi|195656427|gb|ACG47681.1| hypothetical protein [Zea mays]
Length = 89
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 58/88 (65%)
Query: 1 MGLEERVAESCINGHKADCAWTVSVHTFSDITNISPVVFLYLLKECYIHGTCKATRKFRA 60
MG E+V ++ D ++ +H FSD++++ F+YLLK+CY +GT KAT KF+
Sbjct: 1 MGRFEQVTPEGPETNQHDEQRSIRLHAFSDLSHVPAATFIYLLKDCYGYGTNKATSKFKI 60
Query: 61 LQQQVSQALCNSPEPGPATFIVRCLYVL 88
L Q V AL N P+PGP T++V+C+Y++
Sbjct: 61 LMQLVKVALHNGPQPGPFTYVVQCMYIV 88
>gi|224138694|ref|XP_002322878.1| predicted protein [Populus trichocarpa]
gi|222867508|gb|EEF04639.1| predicted protein [Populus trichocarpa]
Length = 80
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 48/65 (73%)
Query: 293 TREPEAGFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGC 352
++E EA + S++LHL EL VE+IIWVDEVDGL HIEG KVVG+DCE K N+VKG
Sbjct: 2 SKEFEASVLQSKYLHLDELAVENIIWVDEVDGLRAVTSHIEGYKVVGLDCEMKSNFVKGS 61
Query: 353 KMNKV 357
K KV
Sbjct: 62 KPKKV 66
>gi|345496472|ref|XP_001601894.2| PREDICTED: probable exonuclease mut-7 homolog [Nasonia vitripennis]
Length = 978
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 88/174 (50%), Gaps = 20/174 (11%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRI 391
+ VVGID EWKP++ + +++++QIA++ V+I D+ L V + +
Sbjct: 410 LRNVNVVGIDSEWKPSF--SIRKPELALIQIATETNVYILDVTTLGNKVQHLWSELGITL 467
Query: 392 LQSPGILKLGYNFQCDIKQLAHSY-----------GELECFKHYEMLLDIQNVFKEPKG- 439
+ ILKLG+ DI + S G L+ ++ LL N KG
Sbjct: 468 FNNRSILKLGFGIAHDIAVIRESLPALSNIRACGDGYLDLSHLWKKLLKEDNFVFPFKGD 527
Query: 440 ------GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
LS L E LG LNK+ + SNWE+RPL ++Q+ YA+LDA LL++++
Sbjct: 528 ECFTNENLSKLVELCLGQRLNKSDQFSNWERRPLRESQILYASLDAYCLLEVYN 581
>gi|363740369|ref|XP_415556.3| PREDICTED: probable exonuclease mut-7 homolog [Gallus gallus]
Length = 999
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 40/208 (19%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV-----PDVLDSCLTR 390
++VGID EW+P++ K +VS++Q+A + VF+ DL +L E + L + R
Sbjct: 387 QIVGIDMEWRPSFGMVGK-PRVSLLQLAVRDEVFLLDLPRLLEQAEVKGEKEKLPHFIQR 445
Query: 391 ILQSPGILKLGYNFQCDIKQLAHSYGELECF-KHYEMLLDIQNV---------------- 433
+ I KLGY D+ LA + L+ K + ++D+ +
Sbjct: 446 LYSDATITKLGYGMSGDLSSLAATCSTLKGMDKQSQSVVDLLTIDKLLQKSSTDWKKGGL 505
Query: 434 ---------------FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALD 478
++P+ GLS L + +LG L+KT + SNWE+RPL + Q+ YAA D
Sbjct: 506 KVDVLSPEQSCEDGGLRQPEKGLSLLVQHVLGKPLDKTEQMSNWEKRPLREEQILYAASD 565
Query: 479 AVVLLQIFHHVRSCSQPTDVSEGHDKIE 506
A LL+++ + C P D E
Sbjct: 566 AYCLLEVYEKL--CKDPESFGLSSDLTE 591
>gi|330998346|ref|ZP_08322170.1| 3'-5' exonuclease [Paraprevotella xylaniphila YIT 11841]
gi|329568452|gb|EGG50257.1| 3'-5' exonuclease [Paraprevotella xylaniphila YIT 11841]
Length = 206
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
+A+ ++ V+G+D E +P++ KGC +NKV+++Q+++D+ F+F L + V DS
Sbjct: 36 RAVDYLLASAVLGVDTETRPSFRKGC-VNKVALLQVSTDDTCFLFRL-----NYIGVTDS 89
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAE 446
+ R+LQ +LK+G + + D L H GE E + + L D F L L
Sbjct: 90 -VKRLLQDENVLKVGLSLRDDFASL-HKRGEFEP-RAFLDLQDYVRAFGIEDMSLQKLYA 146
Query: 447 KILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
I G ++K +R +NWE L++ Q YAA DA ++++ + + + D
Sbjct: 147 NIFGQKISKGQRLTNWEADVLTEGQKLYAATDAWACIRLYRELEALRENKD 197
>gi|294944235|ref|XP_002784154.1| 3-5 exonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239897188|gb|EER15950.1| 3-5 exonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 368
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 88/177 (49%), Gaps = 7/177 (3%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
++ +D V+ +A + ++G D E KP+ V G NK +I+QIAS + ++ + +
Sbjct: 62 VMIIDTVEEDARAADAFDKETLLGFDSETKPSLVPGVT-NKTAIIQIASSSVCGVWRVRQ 120
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK 435
L DVL LT++L P I K ++ + + L+C ++ L +
Sbjct: 121 L-----DVLPPTLTKLLTDPSITKASQGATSEVTTVYREFSGLKCQGFVDLHLLAMGLRC 175
Query: 436 EPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSC 492
P+ L GL L L K R SNWEQ PLS +QLEYAA DA V Q+ +R+
Sbjct: 176 TPRS-LQGLCALFLHKRLLKAERISNWEQVPLSPSQLEYAATDAWVSRQVLEAMRAA 231
>gi|326671072|ref|XP_003199355.1| PREDICTED: probable exonuclease mut-7 homolog [Danio rerio]
Length = 847
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 96/189 (50%), Gaps = 24/189 (12%)
Query: 319 VDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAE 378
++EVD +A+ ++ VVG+D EW+ + +V+++Q+A + VF+ DL A
Sbjct: 446 LEEVDKCREAV--LKSGSVVGMDMEWRAGF-GTVSSQRVALIQLAVQDQVFLLDLCAHAI 502
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGEL-ECFKHYEMLLDIQNVFKE- 436
+ +L ILKLGY D++ L ++ +L E E +LD+ + +E
Sbjct: 503 SHHSTTVDFIRALLSDKKILKLGYGMSGDLRSLVSTWPDLREEPMKMEGVLDLLLIHQEL 562
Query: 437 ------PKG-------------GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAAL 477
KG GLS L +++LG LNK+ + SNWE+RPL +QL YAA
Sbjct: 563 QRCWLGNKGCRSVEVSEGPAEKGLSLLVQQVLGKPLNKSEQLSNWERRPLRTSQLRYAAA 622
Query: 478 DAVVLLQIF 486
DA LL I+
Sbjct: 623 DAYCLLDIY 631
>gi|390364698|ref|XP_798576.3| PREDICTED: probable exonuclease mut-7 homolog [Strongylocentrotus
purpuratus]
Length = 207
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 13/148 (8%)
Query: 343 EWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKL-AEDVPDVLDSCLTRILQSPGILKLG 401
EWKP + + K+ KV++ QIA+ E V++ D+ L + D++ + R+LQS ILKLG
Sbjct: 2 EWKPPFNRTQKV-KVAVCQIATHEKVYLLDMRALWVPETKDIVKTFFQRLLQSEDILKLG 60
Query: 402 YNFQCDIKQLAHSYGEL-ECFKHYEMLLDIQNVFKE----------PKGGLSGLAEKILG 450
+ D K L+ S+ E+ E K + +DI + K GL+ L G
Sbjct: 61 FGISGDYKMLSQSFLEVQEALKGEKRTVDINGLSKRILQMISAPVNSSFGLTDLVHFCFG 120
Query: 451 AGLNKTRRNSNWEQRPLSQNQLEYAALD 478
L+K R S+WE+RPLSQ Q+ YA ++
Sbjct: 121 KNLDKRDRMSDWEKRPLSQAQMTYAGIN 148
>gi|345315003|ref|XP_001510635.2| PREDICTED: probable exonuclease mut-7 homolog, partial
[Ornithorhynchus anatinus]
Length = 846
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 103/217 (47%), Gaps = 45/217 (20%)
Query: 320 DEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA-- 377
+EV G + ++ +VVGID EWKP++ + +VSI+Q+A + VF+ DL++++
Sbjct: 454 EEVAGWKDVV--LQAGQVVGIDMEWKPSF-GAVRKPRVSILQMAVEGHVFLLDLLEVSKP 510
Query: 378 ------EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECF-KHYEMLLDI 430
E+ + + + P I KLGY D++ LA S L K + +LD+
Sbjct: 511 EDRRGEEEENEAFAHFIQELYLDPSITKLGYGMLGDLRNLASSGPALRDLDKQVQGVLDL 570
Query: 431 -------------------------QNVFKEPKG------GLSGLAEKILGAGLNKTRRN 459
Q+ E +G GLS L +++LG L+K +
Sbjct: 571 FQIDKQLQKRPGQRKKSSRPVDVLAQDPGPEARGAKRAEKGLSLLVQRVLGKPLDKAEQL 630
Query: 460 SNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPT 496
S+WE+RPL Q+ YAA DA LL+++ + C P
Sbjct: 631 SDWERRPLRPAQILYAASDAYCLLEVYRAL--CDDPA 665
>gi|426225953|ref|XP_004007122.1| PREDICTED: probable exonuclease mut-7 homolog [Ovis aries]
Length = 764
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 80/167 (47%), Gaps = 30/167 (17%)
Query: 335 CKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAE----DVPDVLDSCLTR 390
C+VVG+D EW+P++ G + +VS+MQ+A + VF+ DL +L+ P ++R
Sbjct: 352 CQVVGVDLEWRPSFGAGGR-PRVSLMQVAVEGRVFLLDLPQLSNPAGGQAPRAFSQLVSR 410
Query: 391 ILQSPGILKLGYNFQCDIKQLAHSYGEL-ECFKHYEMLLDIQNVFKEPKGGLSGLAEKIL 449
+L P I KLGY D++ L SY L + + + LD+ V
Sbjct: 411 LLSDPSITKLGYGMAGDLRSLGASYPALAQAGQQLQGGLDLLQVH--------------- 455
Query: 450 GAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPT 496
R+ RPL + QL YAA DA LL++F + C +P
Sbjct: 456 -------RQXXXXXXRPLGEGQLVYAAADAYCLLEVFWAL--CREPA 493
>gi|326930167|ref|XP_003211223.1| PREDICTED: probable exonuclease mut-7 homolog [Meleagris gallopavo]
Length = 916
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 43/226 (19%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
W D V K + + ++VGID EWKP++ K +VS++Q+A + VF+ DL +L
Sbjct: 372 WEDMVQCCEKVL---QPGQIVGIDMEWKPSFGMVGK-PRVSLLQLAVRDEVFLLDLPQLL 427
Query: 378 EDV-----PDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECF-KHYEMLLDIQ 431
E + L + + I KLGY D+ LA + L+ K + ++D+
Sbjct: 428 EQAEVKGEKEKLPHIIQMLYSDATITKLGYGMSGDLSSLAATCSTLKGMDKQSQSVVDLL 487
Query: 432 NV-------------------------------FKEPKGGLSGLAEKILGAGLNKTRRNS 460
+ ++P+ GLS L + +LG L+KT + S
Sbjct: 488 TIDKLLQKSSIDWKKGSLKVDALSPEQSCEDEGLRQPEKGLSLLVQHVLGKPLDKTEQMS 547
Query: 461 NWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSEGHDKIE 506
NWE+RPL + Q+ YAA DA LL+++ + C P D E
Sbjct: 548 NWEKRPLREEQILYAASDAYCLLEVYEKL--CKDPESFGLSSDLTE 591
>gi|332882913|ref|ZP_08450520.1| 3'-5' exonuclease [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|357046813|ref|ZP_09108432.1| 3'-5' exonuclease [Paraprevotella clara YIT 11840]
gi|332679121|gb|EGJ52111.1| 3'-5' exonuclease [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|355530332|gb|EHG99745.1| 3'-5' exonuclease [Paraprevotella clara YIT 11840]
Length = 206
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 90/173 (52%), Gaps = 13/173 (7%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDL--IKLAEDVPDVL 384
+A+ ++ V+G+D E +P++ KGC NKV+++Q+++D+ F+F L I + E V
Sbjct: 36 RAVDYLLASAVLGVDTETRPSFRKGC-TNKVALLQVSTDDTCFLFRLNHIGVTESVK--- 91
Query: 385 DSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGL 444
R+LQ +LK+G + + D L H GE E + + L D F L L
Sbjct: 92 -----RLLQDENVLKVGLSLRDDFASL-HKRGEFEP-RAFLDLQDYVRAFGIEDMSLQKL 144
Query: 445 AEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
I G ++K +R +NWE L++ Q YAA DA ++++ + + + D
Sbjct: 145 YANIFGQKISKGQRLTNWEADVLTEGQKLYAATDAWACIRLYRELETLKENND 197
>gi|313205201|ref|YP_004043858.1| 3'-5' exonuclease [Paludibacter propionicigenes WB4]
gi|312444517|gb|ADQ80873.1| 3'-5' exonuclease [Paludibacter propionicigenes WB4]
Length = 231
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 94/181 (51%), Gaps = 19/181 (10%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
I VD++ + AI + KVVGID E KP++ +G +KVS++QI++ + F+F L K
Sbjct: 23 ITLVDDLSKIQPAIAELRKSKVVGIDTETKPSFTRGT-YHKVSLVQISTLDHCFLFRLNK 81
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLA--HSYGELECFKHYEMLLDIQNV 433
+ D P + L L I K+G + + D+ L H++ C +DIQ +
Sbjct: 82 I--DFP----AALAEFLSDENIKKIGLSLRDDLNGLNKHHAFKPANC-------VDIQTI 128
Query: 434 FKE---PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
+ + GL + + G ++K++R +NWE L++ Q YAA DA LQI+ +
Sbjct: 129 VQSYGILELGLQKIYAILFGKKISKSQRLTNWENPELTEQQQRYAATDAWASLQIYLQLM 188
Query: 491 S 491
S
Sbjct: 189 S 189
>gi|334312267|ref|XP_001374708.2| PREDICTED: probable exonuclease mut-7 homolog [Monodelphis
domestica]
Length = 1091
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 125/272 (45%), Gaps = 59/272 (21%)
Query: 262 LEYLVYLAMEAGYSEKVDELCERYSLEGFLKTREPEAGFVHSRFLHLKELVVEDIIWVDE 321
++ LV E+ Y K+D+ + Y + R +H FLH W +E
Sbjct: 361 IQSLVEETKESTYDSKMDKKNDYYYQLPIARER------IH--FLH---------TW-EE 402
Query: 322 VDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVP 381
VD I ++ +VVGID EW+P++ +VS++QIA+ E V++ DL++ ++
Sbjct: 403 VDKCRDVI--LQPGQVVGIDMEWRPSFGL-VGRPRVSVLQIATKEHVYLLDLLQFSKLDK 459
Query: 382 DVLDSCLTRILQS----PGILKLGYNFQCDIKQLAHSYGEL-ECFKHYEMLLDIQNVFK- 435
+ + L + S P I KLGY D+ L+ +Y L E K + +LD+ V K
Sbjct: 460 EEKEKELCHFIWSLFSEPSITKLGYGMSGDLCSLSTTYPALREMEKQAQGILDLLQVDKQ 519
Query: 436 --------------------EPKG----------GLSGLAEKILGAGLNKTRRNSNWEQR 465
EP GLS L + +LG L+K + SNWE+R
Sbjct: 520 LQKNSGLWKKHHIPVDSLCQEPSSKTKRTRHAEKGLSLLVQNLLGKPLDKREQLSNWEKR 579
Query: 466 PLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
PL + Q+ YAA DA LL+++ + C P +
Sbjct: 580 PLREEQILYAASDAYCLLEVYEVL--CKDPAN 609
>gi|390458575|ref|XP_002743563.2| PREDICTED: probable exonuclease mut-7 homolog [Callithrix jacchus]
Length = 846
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 95/181 (52%), Gaps = 23/181 (12%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVP----DVLDSCLTRI 391
+VVG+D EW ++ G + + S++Q+A++ VF+ D++ + + ++
Sbjct: 413 QVVGVDLEWTLVFIAGGR-PRPSLLQVATEGCVFLLDILAFTQPPAGQGAQAFSQLVAQL 471
Query: 392 LQSPGILKLGYNFQCDIKQLAHS-----YGELECFKHYEMLLDIQNV----FKEP----K 438
L P I KLGY D+++L S + E + ++LL + + P
Sbjct: 472 LSDPSITKLGYGMAGDLQKLGMSCPILAHVEKQVLGGVDLLLVHRQMRMAGMPTPGMARA 531
Query: 439 GGLSGLA---EKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQP 495
GGL GL+ +++LG L+KT++ SNW++RPL + QL YAA DA LL++ H C +P
Sbjct: 532 GGLRGLSLLVQQVLGTTLDKTQQLSNWDRRPLFEEQLIYAAADAYCLLEV--HQALCREP 589
Query: 496 T 496
Sbjct: 590 A 590
>gi|34540197|ref|NP_904676.1| 3'-5' exonuclease [Porphyromonas gingivalis W83]
gi|34396509|gb|AAQ65575.1| 3'-5' exonuclease domain protein [Porphyromonas gingivalis W83]
Length = 188
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 95/181 (52%), Gaps = 11/181 (6%)
Query: 319 VDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAE 378
+D+ + +AI + + +G D E +P++V+G + V++MQ++++ F+F L +
Sbjct: 13 IDKPQAIPEAIRLLSASRTIGFDTETRPSFVRGAR-PSVALMQMSTETDCFLFRLNMI-- 69
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDIQNVFKEP 437
D+P+ L ++L++PGILK+G + D+ + E F + L +
Sbjct: 70 DIPEELQ----QLLENPGILKVGLSLSDDMTVIRRRKPIEPAGFVELQRLCPAYGIRD-- 123
Query: 438 KGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
L + + G ++K++R +NWE R L+ Q YAALDA L+IF+ + + PT
Sbjct: 124 -ASLQKIYAILFGRRISKSQRLTNWEARTLTAAQQSYAALDAWACLRIFNQLMTLPTPTP 182
Query: 498 V 498
V
Sbjct: 183 V 183
>gi|188995460|ref|YP_001929712.1| 3'-5' exonuclease [Porphyromonas gingivalis ATCC 33277]
gi|334147267|ref|YP_004510196.1| 3'-5' exonuclease domain-containing protein [Porphyromonas
gingivalis TDC60]
gi|419970137|ref|ZP_14485647.1| 3'-5' exonuclease [Porphyromonas gingivalis W50]
gi|188595140|dbj|BAG34115.1| probable 3'-5' exonuclease [Porphyromonas gingivalis ATCC 33277]
gi|333804423|dbj|BAK25630.1| 3'-5' exonuclease domain-containing protein [Porphyromonas
gingivalis TDC60]
gi|392611552|gb|EIW94288.1| 3'-5' exonuclease [Porphyromonas gingivalis W50]
Length = 200
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 95/181 (52%), Gaps = 11/181 (6%)
Query: 319 VDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAE 378
+D+ + +AI + + +G D E +P++V+G + V++MQ++++ F+F L +
Sbjct: 25 IDKPQAIPEAIRLLSASRTIGFDTETRPSFVRGAR-PSVALMQMSTETDCFLFRLNMI-- 81
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDIQNVFKEP 437
D+P+ L ++L++PGILK+G + D+ + E F + L +
Sbjct: 82 DIPEELQ----QLLENPGILKVGLSLSDDMTVIRRRKPIEPAGFVELQRLCPAYGIRD-- 135
Query: 438 KGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
L + + G ++K++R +NWE R L+ Q YAALDA L+IF+ + + PT
Sbjct: 136 -ASLQKIYAILFGRRISKSQRLTNWEARTLTAAQQSYAALDAWACLRIFNQLMTLPTPTP 194
Query: 498 V 498
V
Sbjct: 195 V 195
>gi|303284617|ref|XP_003061599.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456929|gb|EEH54229.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1174
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 125/297 (42%), Gaps = 51/297 (17%)
Query: 239 LKRLAEKACWDIAEAKTKGDKRLLEYLVYLAMEAGYSEKVDELCERYSLEGFLKTREPEA 298
L+ LA + WD+A A D + + L E +K + +
Sbjct: 394 LRALAREGRWDVANALAGEDAASIALMKTLTAEEDAMKKTRS--DLPPAPAPAPAPANDD 451
Query: 299 GFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCK----- 353
G +RFL L ++ I+ VD V+ L +AI ++ V+G+D EWKP+ +
Sbjct: 452 GDGDARFLSL-DIPPASILLVDAVETLDRAIDALKDDVVIGLDTEWKPDPPSAPRGRRRA 510
Query: 354 ----------------MNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGI 397
N +++Q+A + V + D++ L +V + L IL +P I
Sbjct: 511 KWQPRNAGKKTERPPPRNPTALVQLAGERGVVLVDMLALRSSSVEVA-AALRAILTAPRI 569
Query: 398 LK--------------------LGYNFQCDIKQLAHSY-GEL-ECFKHYEMLLDIQNVFK 435
+G+ + D+ +LA SY G + + + L +Q
Sbjct: 570 RTAAGASERELERHLIKTPPTVVGWGLRDDLSRLAASYPGPIADAVRDVASALCLQE-LS 628
Query: 436 EPKG---GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
P+G GLS E LG GL+K++ S+W +RPL+ QL YAA DA V +++
Sbjct: 629 GPRGHRPGLSAACEAWLGRGLDKSQTTSDWSRRPLTAAQLAYAAQDARVCVRLLREA 685
>gi|391336495|ref|XP_003742615.1| PREDICTED: probable exonuclease mut-7 homolog [Metaseiulus
occidentalis]
Length = 629
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 94/175 (53%), Gaps = 21/175 (12%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV-PDVLDSCLTRILQSP 395
V+G+D EWKP + + ++S++Q+A+ + V++FD++KL+E + P+ S R+ +P
Sbjct: 378 VIGVDAEWKPA-MGLLQKTRLSLIQMATRQKVYLFDVLKLSETISPEDWASFYERVFDNP 436
Query: 396 GILKLGYNFQCDIKQLAHSYGE---LECFKHYEMLLDI--------------QNVFKEPK 438
LG+ DI++L G + FK ++ D Q + K
Sbjct: 437 TGCILGFGIAEDIRKLEALSGTSLYMTYFKDLMIVRDALFTHRPDLMESVVDQKILKN-H 495
Query: 439 GGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV-RSC 492
GLS L ++LG L+K+ + S+WE RPL +Q+ YAALDA L++ + + R C
Sbjct: 496 NGLSRLTCRLLGYPLDKSEQCSDWENRPLRPSQVHYAALDAHCLIRCWDELARRC 550
>gi|224824622|ref|ZP_03697729.1| 3'-5' exonuclease [Pseudogulbenkiania ferrooxidans 2002]
gi|224603115|gb|EEG09291.1| 3'-5' exonuclease [Pseudogulbenkiania ferrooxidans 2002]
Length = 222
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 87/165 (52%), Gaps = 25/165 (15%)
Query: 335 CKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTR---I 391
C+V+G D E +P + KG + ++Q+A+ ++F + +LA+ LTR I
Sbjct: 67 CRVLGFDTESRPTFHKGETSSGPHLVQLATATHAYLFPVERLAD---------LTRLRMI 117
Query: 392 LQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPK-----GGLSGLAE 446
L+SP I K+G+ D+++L G +EC L+DI +F++P G + +A
Sbjct: 118 LESPAIRKVGFELGSDVQRLRAKLG-IEC----AALVDIGRLFRQPGEHRTVGAVQAVA- 171
Query: 447 KILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
++ G K++R SNW LS+ Q YA DA V LQ++H +
Sbjct: 172 RLFGQCFRKSKRQSTSNWASPVLSEAQCVYAGNDAYVALQVYHEL 216
>gi|384246296|gb|EIE19787.1| ribonuclease H-like protein [Coccomyxa subellipsoidea C-169]
Length = 200
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 83/159 (52%), Gaps = 12/159 (7%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
+V ID EW+P++ G ++V++MQ+A+ + +L +P VL L+ P
Sbjct: 23 LVAIDLEWRPDF--GAGQSRVALMQLATSSCAVLIRTCRLKHQLPPVL----AEFLRDPT 76
Query: 397 ILKLGYNFQ-CDIKQLAHSY--GELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGL 453
I+ G+ + D ++ S+ G F H+ L + + GL L ++LG L
Sbjct: 77 IVLCGFGWDGSDENKMQASFRMGR-ASFPHFIDLQRVSVAMGYHRYGLGSLTARVLGFEL 135
Query: 454 NKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
K+RR SNWE R L+Q Q+ YAALDA++ QIF +R
Sbjct: 136 PKSRRVSMSNWEARRLTQGQVVYAALDALITGQIFRALR 174
>gi|347538650|ref|YP_004846074.1| 3'-5' exonuclease [Pseudogulbenkiania sp. NH8B]
gi|345641827|dbj|BAK75660.1| 3'-5' exonuclease [Pseudogulbenkiania sp. NH8B]
Length = 200
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 87/165 (52%), Gaps = 25/165 (15%)
Query: 335 CKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTR---I 391
C+V+G D E +P + KG + ++Q+A+ ++F + +LA+ LTR I
Sbjct: 45 CRVLGFDTESRPTFHKGETSSGPHLVQLATATHAYLFPVERLAD---------LTRLRMI 95
Query: 392 LQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPK-----GGLSGLAE 446
L+SP I K+G+ D+++L G +EC L+DI +F++P G + +A
Sbjct: 96 LESPAIRKVGFELGSDVQRLRAKLG-IEC----AALVDIGRLFRQPGEHRTVGAVQAVA- 149
Query: 447 KILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
++ G K++R SNW LS+ Q YA DA V LQ++H +
Sbjct: 150 RLFGQCFRKSKRQSTSNWASPVLSEAQRVYAGNDAYVALQVYHEL 194
>gi|348513863|ref|XP_003444460.1| PREDICTED: probable exonuclease mut-7 homolog [Oreochromis
niloticus]
Length = 864
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 110/218 (50%), Gaps = 33/218 (15%)
Query: 297 EAGFVHSRFLHLKELVVEDIIWVDEVDGLHK--AICHIEGCKVVGIDCEWKPNYVKGC-K 353
E+ H + L + + +VD + L + +I EG VVG+D EW+P + GC
Sbjct: 330 ESAQSHCEKFYQVPLTKDKVHFVDTPEALERCQSIVLKEGV-VVGVDMEWQPTF--GCIS 386
Query: 354 MNKVSIMQIASDEMVFIFDLI--KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQL 411
+V+++Q+A + VF+ DL + E P+ + + + +LKLGY D+K L
Sbjct: 387 TQQVALIQLAVSDRVFLVDLCARRFCEH-PETI-RFIRSLFSQQSVLKLGYGMAGDLKCL 444
Query: 412 AHSYGEL-ECFKHYEMLLDIQNVFKE------------PK----------GGLSGLAEKI 448
++ +L E E +LD+ ++ K+ PK GLS L +++
Sbjct: 445 LATWPQLQEDPLKMEGMLDLLSIHKKIQHSALSRTHNGPKEVLVGEDCAEKGLSLLVQQV 504
Query: 449 LGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
LG L+KT + SNWE+RPL +Q+ YA DA LL+++
Sbjct: 505 LGRPLDKTEQMSNWEKRPLRISQIRYAVADAYCLLEVY 542
>gi|424513358|emb|CCO65980.1| predicted protein [Bathycoccus prasinos]
Length = 568
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 85/181 (46%), Gaps = 33/181 (18%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV---------PDVLDSC 387
V+G+DCEWKP VS+ Q+A+ E V++ D+ D + D+
Sbjct: 145 VLGLDCEWKPG-----DNTPVSLFQVATRENVYLLDVFAFMMDTGGGGEEKGTAEAFDAF 199
Query: 388 LTRILQSPGILKLGYNFQCDIKQLAHSYGELE----CFKHYEMLLDIQNV---------- 433
L + ++ ++KLG+ F DIK+L SY LE + + +D++ +
Sbjct: 200 LKLLFENETLIKLGFGFDYDIKRLRMSYAPLEETLSMDRRKKGWIDVRELAYTADAVSSH 259
Query: 434 ----FKEPKG-GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHH 488
+K K GL+ L IL L+K + S+W QRPLS Q YAA DA L+ I
Sbjct: 260 NKRKYKHQKRVGLAALTRDILKCNLDKKCQVSDWSQRPLSDPQQRYAATDAYSLISILDV 319
Query: 489 V 489
V
Sbjct: 320 V 320
>gi|356554607|ref|XP_003545636.1| PREDICTED: LOW QUALITY PROTEIN: probable exonuclease mut-7 homolog
[Glycine max]
Length = 499
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 90/161 (55%), Gaps = 17/161 (10%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIA-SDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG+D EWKP V+ +V+++QIA D VF+ DL+ L + D L +L SP
Sbjct: 34 VVGLDAEWKP--VRR-SFPRVAVLQIACGDSAVFVLDLLSLPLSS--LWDP-LRELLLSP 87
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE--------PK--GGLSGLA 445
ILKLG+ F+ D+ L+ ++ F E LDI++V+ PK LS +
Sbjct: 88 DILKLGFGFKQDLVYLSSTFASHGGFDKVEPYLDIKSVYNHLQHNKKHVPKQSKSLSTIC 147
Query: 446 EKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
++LG L+K + S+W RPL++ Q+ YAA+DA LL IF
Sbjct: 148 TEVLGFSLSKELQCSDWSYRPLTEEQITYAAMDAHCLLDIF 188
>gi|255549190|ref|XP_002515649.1| 3-5 exonuclease, putative [Ricinus communis]
gi|223545192|gb|EEF46701.1| 3-5 exonuclease, putative [Ricinus communis]
Length = 523
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 33/183 (18%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIA-----------SDEMVFIFDL--IKLAEDVPDV 383
++G+D EWKP V+++Q+A ++ +VF+ DL I+L+
Sbjct: 34 IIGLDAEWKPVRGHQSTFPTVALLQLACQLRPQFGSDSAESLVFLLDLSLIRLSS----- 88
Query: 384 LDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELEC---FKHYEMLLDIQNVF------ 434
+ L + SP ILKLG+ F+ D+ L+ ++ C F E LDI +++
Sbjct: 89 IWKLLKEVFASPDILKLGFRFKQDLVYLSSTFCSQGCDPGFHKVEPYLDITSIYHFLQHK 148
Query: 435 ----KEPK--GGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHH 488
K PK L+ + ++LG L+K + S+W RPL++ Q YAA+DA LL+IF+
Sbjct: 149 QRGRKIPKETKSLATICNEVLGISLSKELQCSDWSHRPLTEEQKAYAAIDAHCLLEIFNV 208
Query: 489 VRS 491
R+
Sbjct: 209 FRA 211
>gi|346466965|gb|AEO33327.1| hypothetical protein [Amblyomma maculatum]
Length = 182
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 84/161 (52%), Gaps = 17/161 (10%)
Query: 345 KPNYVKGCKMNKVSIMQIASDEMVFIFDLIKL-AEDVPDVLDSCLTRILQSPGILKLGYN 403
KP + G ++++I+Q+A + VFI D+++L AE D + IL S ILKLGY
Sbjct: 1 KPAF--GLIPSRLAIIQLAVWDCVFILDMLRLVAELQSSDWDKLFSEILSSHKILKLGYG 58
Query: 404 FQCDIKQLAHSYGELE---------CFKHYEMLLDIQNVFK--EPKGGLSGLAE---KIL 449
D++ +A + + C ++ D V K +P+ GLAE L
Sbjct: 59 IAEDLRLVAETVKQPNAKVSRVVDLCNFAQKLRQDYPRVIKPVDPRRKCKGLAELTYSTL 118
Query: 450 GAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
G LNK+ R SNWE RPL +Q YAALDA LLQI+ ++
Sbjct: 119 GLPLNKSERCSNWENRPLRPSQTVYAALDAYCLLQIYEELK 159
>gi|118361377|ref|XP_001013917.1| 3'-5' exonuclease family protein [Tetrahymena thermophila]
gi|89295684|gb|EAR93672.1| 3'-5' exonuclease family protein [Tetrahymena thermophila SB210]
Length = 1490
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 145/311 (46%), Gaps = 65/311 (20%)
Query: 236 PILLKRLAEKAC----------WDIAEAKTKGDKRLLEYLV-YLAMEAGYSE-------- 276
P L+ R+ +K W+ AE + +LL YLV L + Y E
Sbjct: 979 PQLVDRMEKKKVAKILQDCNQNWEKAEERINSQSQLLFYLVDLLVQKKKYQEAASIISRH 1038
Query: 277 --------KVDELCERYSLEGFLKTREPEA---------GF---------VHSRFLHLKE 310
++D L + L L+ + GF ++L L+E
Sbjct: 1039 QLNKIFQTQIDSLASHFELNQLLQDKSQNTMLNRILERDGFGPTEVLCFLEQEKYLTLEE 1098
Query: 311 LVVE--DIIWVDEVDGLHK-AICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEM 367
+ D+ ++D+++ K A+ + K++G D E+ P + K K ++ +Q+A++
Sbjct: 1099 CGINQTDVYFIDQINQDFKIAVEILTKSKLIGFDSEFIPRWNKFEK-GGIATLQLATNNK 1157
Query: 368 VFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYG-----ELECFK 422
+FIFD IKL E+ LD +T + ++ ILK+G++ DI ++ ++ +++ F+
Sbjct: 1158 IFIFDTIKLLEN-EQFLD-FVTYLFENENILKIGHSIWQDINEMDKTFKAKKEMKIKSFQ 1215
Query: 423 H----YEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALD 478
Y+ L+++NV L + +IL ++K + S+W +RPL + Q+ YAALD
Sbjct: 1216 DVGIIYKEALNLENV-----SSLKQMCYQILKQKISKYEQISDWSKRPLRKCQIHYAALD 1270
Query: 479 AVVLLQIFHHV 489
A++ L ++ +
Sbjct: 1271 ALLPLMLYEQI 1281
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 141/307 (45%), Gaps = 50/307 (16%)
Query: 236 PILLKRLAEKAC---------WDIAEAKTKGDKRLLEYLVYLAMEAGYSEKVDELCERYS 286
P+L+ ++ +K W+ AE + +K +L YLV E G +++ + +R+
Sbjct: 255 PLLISKMEKKHIEKVLPSPDDWEKAEERVHTNKEVLCYLVETLKEQGKNDEAVSIVKRHQ 314
Query: 287 LE---------------------------GFLKTREPEAGFVHSRFLHLKELVV--EDII 317
L+ GF + E G ++HL + + ED++
Sbjct: 315 LDQLDYYKEHIQQINNSGKYVPNRILEKDGFGPSEEIIFGQGSGTYIHLSQFDIQEEDVV 374
Query: 318 WVDEVDGLHKAICHIE----GCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDL 373
++ + + +E K+VG D E+ + K K VSI+Q+A ++IFD
Sbjct: 375 FIYDTKEQKQIFQEVEKTILNSKIVGFDSEFASQWNKFEK-GGVSIIQLAVQNKIYIFDA 433
Query: 374 IKLAED--VPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECF---KHYEMLL 428
+ L + + + C T + +S I+K G++ D+ ++ ++ + F ++ L
Sbjct: 434 LNLLVNKFSQEFFNFCKT-LFESKQIIKAGHSISTDLNEMEKTFKSEKKFDLNNFVDIAL 492
Query: 429 DIQNVFK-EPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
+++F L + +K+L ++K + SNW++RPL ++Q+ YAA+DA ++++++
Sbjct: 493 LNRDIFSLANTASLKFMVQKLLNLQMSKFEQISNWDRRPLRKSQIHYAAVDAFIVIKLYE 552
Query: 488 HVRSCSQ 494
+ Q
Sbjct: 553 KLVQIQQ 559
>gi|198438094|ref|XP_002131917.1| PREDICTED: similar to MUTator family member (mut-7) [Ciona
intestinalis]
Length = 921
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 34/222 (15%)
Query: 291 LKTREPEAGFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHI-EGCKVVGIDCEWKPNYV 349
L ++ + ++F LK L + +I VD + L K +I VGID EW
Sbjct: 338 LGSQSTQNKITQNQFHQLK-LPLTSVIVVDNEELLQKCYENILNNNSCVGIDSEWA---F 393
Query: 350 KGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSC-----LTRILQSPGILKLGYNF 404
+ V+I+Q+A V++ D+ +++C L ++++S LKLGY
Sbjct: 394 STSNTDGVAILQLAVQSNVYLLDVFNFTNQ----MNTCTLGLFLAKLIKSKNHLKLGYGL 449
Query: 405 QCDIKQLAHSYGELE--------------CFKH----YEMLLDIQNVFKE--PKGGLSGL 444
D+++LA S L+ KH Y LL ++N E GLS L
Sbjct: 450 NEDMQKLACSIPLLKEALQASVRVLDFHIVLKHACRLYPKLLAMENDADELCKHSGLSKL 509
Query: 445 AEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
A + LG L+K+ + S+WE+RPL Q+ YAALDA LL+I+
Sbjct: 510 ALQTLGQALDKSEQISDWERRPLRVTQVTYAALDAFCLLEIY 551
>gi|297808445|ref|XP_002872106.1| hypothetical protein ARALYDRAFT_489298 [Arabidopsis lyrata subsp.
lyrata]
gi|297317943|gb|EFH48365.1| hypothetical protein ARALYDRAFT_489298 [Arabidopsis lyrata subsp.
lyrata]
Length = 508
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 91/175 (52%), Gaps = 28/175 (16%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIA--------SDEM--VFIFDLIKLAEDVPDVLDS 386
++ +D EWKP + V+++Q+A DE+ VF+ DL + +P V +
Sbjct: 30 IIALDAEWKPQHSNTSSFPTVTLLQVACRLSYATDDDEVSDVFLIDLTSI--HLPSVWE- 86
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELEC---FKHYEMLLDIQNVF--------- 434
L + SP +LKLG+ F+ D+ L+ ++ + C F+ + LDI +++
Sbjct: 87 LLNEMFVSPDVLKLGFRFKQDLVYLSSTFTQHGCEGGFQEVKQYLDITSIYNYLQHKRFG 146
Query: 435 -KEPKG--GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
K PK L+ + +++L L+K + S+W RPL++ Q YAA DA LLQIF
Sbjct: 147 RKAPKDIKSLAAICKEMLDISLSKELQCSDWSYRPLTEEQKLYAATDAHCLLQIF 201
>gi|218263130|ref|ZP_03477349.1| hypothetical protein PRABACTJOHN_03030 [Parabacteroides johnsonii
DSM 18315]
gi|423341720|ref|ZP_17319435.1| hypothetical protein HMPREF1077_00865 [Parabacteroides johnsonii
CL02T12C29]
gi|218222915|gb|EEC95565.1| hypothetical protein PRABACTJOHN_03030 [Parabacteroides johnsonii
DSM 18315]
gi|409220608|gb|EKN13563.1| hypothetical protein HMPREF1077_00865 [Parabacteroides johnsonii
CL02T12C29]
Length = 193
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 95/180 (52%), Gaps = 19/180 (10%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
II +D + KA+ ++ + VG D E +P++ KG + K+S+MQI++DE F+F L +
Sbjct: 26 IIVIDTLKDTEKAVSYLSEFQAVGFDTETRPSFKKGQRY-KISLMQISTDEACFLFRLNR 84
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYE--MLLDIQNV 433
+ D+P VL+ L + + K+G + + D +G ++ K + LD+QN
Sbjct: 85 I--DIPKVLEEFLA----NEKVQKIGLSLRDD-------FGAMQKRKDIQPANFLDLQNY 131
Query: 434 ---FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
F L + + ++K +R SNWE LS Q +YAALDA L+I++ ++
Sbjct: 132 VGQFGIEDASLQKIYAILFNKKISKGQRLSNWEADVLSDAQKKYAALDAWACLKIYNQLK 191
>gi|317475897|ref|ZP_07935153.1| 3'-5' exonuclease [Bacteroides eggerthii 1_2_48FAA]
gi|316907930|gb|EFV29628.1| 3'-5' exonuclease [Bacteroides eggerthii 1_2_48FAA]
Length = 210
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 94/178 (52%), Gaps = 9/178 (5%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
+A+ +++ C ++GID E +P++ KG + +KV+++Q++S+E F+F L +P ++
Sbjct: 35 RAVAYLKKCPILGIDSETRPSFTKG-QSHKVALLQVSSEEHCFLFRLNLTGLTLPIIM-- 91
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAE 446
+L++PGI K+G + + D L H E E L + F L +
Sbjct: 92 ----LLENPGITKVGLSLRDDFMML-HKRAPFEQRACVE-LQEYVRTFGIQDRSLQKIYA 145
Query: 447 KILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSEGHDK 504
+ G ++K++R SNWE L+ +Q +YAA DA L I++ ++ + D D+
Sbjct: 146 ILFGEKISKSQRLSNWEAEMLTPSQQQYAATDAWACLNIYNRLQELKRTGDFEMAIDE 203
>gi|218129756|ref|ZP_03458560.1| hypothetical protein BACEGG_01335 [Bacteroides eggerthii DSM 20697]
gi|217987866|gb|EEC54191.1| 3'-5' exonuclease [Bacteroides eggerthii DSM 20697]
Length = 210
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 94/178 (52%), Gaps = 9/178 (5%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
+A+ +++ C ++GID E +P++ KG + +KV+++Q++S+E F+F L +P ++
Sbjct: 35 RAVAYLKKCPILGIDSETRPSFTKG-QSHKVALLQVSSEEHCFLFRLNLTGLTLPIIM-- 91
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAE 446
+L++PGI K+G + + D L H E E L + F L +
Sbjct: 92 ----LLENPGITKVGLSLRDDFMML-HKRAPFEQRACVE-LQEYVRTFGIQDRSLQKIYA 145
Query: 447 KILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSEGHDK 504
+ G ++K++R SNWE L+ +Q +YAA DA L I++ ++ + D D+
Sbjct: 146 ILFGEKISKSQRLSNWEAEMLTPSQQQYAATDAWACLNIYNRLQELKRTGDFEMAIDE 203
>gi|356550873|ref|XP_003543807.1| PREDICTED: probable exonuclease mut-7 homolog [Glycine max]
Length = 506
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 90/161 (55%), Gaps = 17/161 (10%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIA-SDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG+D EWKP V+ +V+++QIA D VF+ DL+ L L + L +L SP
Sbjct: 35 VVGLDAEWKP--VRRL-FPRVAVLQIACGDSAVFLLDLLSLPLSS---LWAPLRELLLSP 88
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE--------PK--GGLSGLA 445
ILKLG+ F+ D+ L+ ++ F E LDI++V+ PK LS +
Sbjct: 89 DILKLGFGFKQDLVYLSSTFASHGGFDKVEPYLDIKSVYNHLQHNKKHVPKQSKSLSTIC 148
Query: 446 EKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
++LG L+K + S+W RPL++ Q+ YAA+DA LL IF
Sbjct: 149 AEVLGFSLSKELQCSDWSHRPLTEEQITYAAMDAHCLLDIF 189
>gi|194759149|ref|XP_001961812.1| GF15154 [Drosophila ananassae]
gi|190615509|gb|EDV31033.1| GF15154 [Drosophila ananassae]
Length = 627
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 26/197 (13%)
Query: 310 ELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVF 369
+L VE +I +D + + ++ + + +D EW N C +++ ++QIA+D+ V+
Sbjct: 406 DLPVESLIIIDTAVKFDEMLNDLQRQQTIYLDSEWLQNI---CGESQLCLLQIATDQFVY 462
Query: 370 IFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYG---ELECFKHYEM 426
+ D + P+ +++ + ILK+G++ CD+ L S L HY
Sbjct: 463 LIDCLARESIQPEQWRLLGSKVFNNVNILKVGFSMACDLSVLQRSLPLQLRLHTPHHY-- 520
Query: 427 LLDIQNVFKEPK-----------------GGLSGLAEKILGAGLNKTRRNSNWEQRPLSQ 469
LD+++++ + K G LS L+ LG LNK+ + SNW RPL
Sbjct: 521 -LDLRSLWLQLKKQHTGVELPFGNINRAGGALSDLSFLCLGKKLNKSNQCSNWTNRPLRH 579
Query: 470 NQLEYAALDAVVLLQIF 486
Q+ YAA+DA L IF
Sbjct: 580 EQIIYAAIDARCLFLIF 596
>gi|346466963|gb|AEO33326.1| hypothetical protein [Amblyomma maculatum]
Length = 190
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 85/161 (52%), Gaps = 17/161 (10%)
Query: 345 KPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV-PDVLDSCLTRILQSPGILKLGYN 403
KP + G ++++I+Q+A + VFI D+++L ++ D + IL S ILKLGY
Sbjct: 1 KPAF--GLIPSRLAIIQLAVWDYVFILDMLRLVGELQASDWDKLFSEILSSHKILKLGYG 58
Query: 404 FQCDIKQLAHSYGELE---------CFKHYEMLLDIQNVFK--EPKGGLSGLAE---KIL 449
D++ +A + + C ++ D V K +P+ GLAE L
Sbjct: 59 IAEDLRLVAETVMQPNAKVSRVLDLCNFAQKLRHDYPGVIKPVDPRRKCKGLAELTYSTL 118
Query: 450 GAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
G LNK+ R SNWE+RPL +Q YAALDA LLQI+ ++
Sbjct: 119 GLPLNKSERCSNWEKRPLRPSQTVYAALDAYCLLQIYEELK 159
>gi|242000324|ref|XP_002434805.1| conserved hypothetical protein [Ixodes scapularis]
gi|215498135|gb|EEC07629.1| conserved hypothetical protein [Ixodes scapularis]
Length = 492
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 115/237 (48%), Gaps = 38/237 (16%)
Query: 303 SRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQI 362
S+FL L+ + + D+ VD DG A C IE KV G ++S++Q+
Sbjct: 260 SKFLSLR-IDLSDVHMVDTPDGF--ARC-IEVLKVRG----------------RLSLVQL 299
Query: 363 ASDEMVFIFDLIKLAEDVPDV-LDSCLTRILQSPGILKLGYNFQCDIKQL---------- 411
A + V++ D++KL+E + + T IL S ILKLGY D+K L
Sbjct: 300 AVWDGVYVLDILKLSEVLGESHWRQLYTEILSSDDILKLGYGIVEDLKLLSEVAKCPSAK 359
Query: 412 AHSYGELECF------KHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQR 465
A ++ +L F KH ++ + +E KG LS L +LG LNK + S+WE R
Sbjct: 360 ARNFIDLCSFSEKLRQKHPSLMKPVIPKDREHKG-LSELTRTLLGLPLNKDEQCSDWENR 418
Query: 466 PLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSEGHDKIEWKSYIVSHMDNPKKSK 522
PL +Q+ YAALDA LLQ++ + ++ D++ E + D P+K K
Sbjct: 419 PLRSSQMRYAALDAFCLLQVYEELFKRAEGEDMNLRELIQEVRDSEAVRRDKPRKYK 475
>gi|379731252|ref|YP_005323448.1| 3'-5' exonuclease [Saprospira grandis str. Lewin]
gi|378576863|gb|AFC25864.1| 3'-5' exonuclease [Saprospira grandis str. Lewin]
Length = 194
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 92/174 (52%), Gaps = 13/174 (7%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
+II ++ + L +A+ + CK++G D E KP++ KG + + VS++Q+A + VF
Sbjct: 23 EIITIETEEQLEEALLALNQCKILGFDTESKPSFRKG-EYHPVSLIQLAMPDKVF----- 76
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKH--YEMLLDIQN 432
L ++ L + ++P I+K G + DI+ L L FK ++ + DI
Sbjct: 77 -LIRNLKSGFSDGLKALFENPKIVKAGPALRDDIRDLQR----LRPFKAKGFKDIADIAK 131
Query: 433 VFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
+ G L LG ++K+++ SNWE+ PLSQ Q YAA DA + L+I+
Sbjct: 132 ANGIQQMGARNLTAIFLGKRISKSQQTSNWEREPLSQAQNFYAATDAYLGLKIY 185
>gi|424841170|ref|ZP_18265795.1| ribonuclease D [Saprospira grandis DSM 2844]
gi|395319368|gb|EJF52289.1| ribonuclease D [Saprospira grandis DSM 2844]
Length = 194
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 91/174 (52%), Gaps = 13/174 (7%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
+II V+ + L +A+ + CK++G D E KP++ KG + VS++Q+A + VF+ +
Sbjct: 23 EIITVETEEQLEEALLALNQCKILGFDTESKPSFRKG-EYYPVSLIQLAMPDKVFLIRNL 81
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECF--KHYEMLLDIQN 432
K L + ++P I+K G + DI+ L L F K ++ + DI
Sbjct: 82 KSG------FSDGLKALFENPKIVKAGPALRDDIRDLQR----LRPFTAKGFKDIADIAK 131
Query: 433 VFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
+ G L LG ++K+++ SNWE+ PLSQ Q YAA DA + L+I+
Sbjct: 132 ANGIQQMGARNLTAIFLGKRISKSQQTSNWEREPLSQAQNFYAATDAYLGLKIY 185
>gi|320352196|ref|YP_004193535.1| 3'-5' exonuclease [Desulfobulbus propionicus DSM 2032]
gi|320120698|gb|ADW16244.1| 3'-5' exonuclease [Desulfobulbus propionicus DSM 2032]
Length = 210
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 88/171 (51%), Gaps = 17/171 (9%)
Query: 328 AICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSC 387
A H+ ++G D E +P + KG K + S++Q+A+D +V++F L ++ P
Sbjct: 43 AAAHLSRAALLGFDTETRPAFRKGQKFSP-SLLQLATDSVVYLFQLQQIGLAQP------ 95
Query: 388 LTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKG----GLSG 443
L IL P I+K G D++ L GELE F+ + +D+ + + +G GL G
Sbjct: 96 LRAILSDPTIIKAGVAPDFDLRSL----GELEPFEP-DGFVDLARMARR-RGVHNHGLRG 149
Query: 444 LAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQ 494
LA + G ++K+ R +NW L+ Q+ YAA DA + +I+ + Q
Sbjct: 150 LAALVCGVRISKSARTTNWANAELTPQQIRYAATDAWIGREIYLRLNGWPQ 200
>gi|357610676|gb|EHJ67090.1| hypothetical protein KGM_03049 [Danaus plexippus]
Length = 839
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 100/196 (51%), Gaps = 22/196 (11%)
Query: 314 EDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDL 373
E+I+ +D + + I + C ++ DCEWKP++ G ++++++QI + + V++ D
Sbjct: 378 ENILIIDTAEKFDELISKLSNCPIISFDCEWKPSF--GAAKSRMALIQIGTFDQVYLIDT 435
Query: 374 IKLAEDVPDVLDS-CLTR--ILQSPGILKLGYNFQCDIKQLAHSYGELECFK-----HYE 425
+ L + S C +L + I+KLG+ + D+ ++ L K +
Sbjct: 436 LILNN--KQYMGSWCRFNKYVLDNAEIIKLGFGVEQDLNEMKSLIIGLNNIKVKGEGLLD 493
Query: 426 MLLDIQNVFK--------EPKGG--LSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYA 475
+ L +N+ K GG LS L + G L K+ + SNWE RPL Q+ YA
Sbjct: 494 LGLLWKNLVKCGLSLPSNSDNGGNSLSSLVQTCFGLPLEKSEQCSNWELRPLRNTQIHYA 553
Query: 476 ALDAVVLLQIFHHVRS 491
ALDA VLL+I+ ++++
Sbjct: 554 ALDAFVLLEIYKYLQN 569
>gi|395506589|ref|XP_003757614.1| PREDICTED: probable exonuclease mut-7 homolog, partial [Sarcophilus
harrisii]
Length = 752
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 99/197 (50%), Gaps = 37/197 (18%)
Query: 320 DEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAED 379
+EVD + ++ +VVGID EW+P++ +VS++QIA+ E V++ DL++
Sbjct: 267 EEVDKCRDVV--LQPGQVVGIDMEWRPSF-GLVGRPRVSVLQIATKEHVYLLDLLQF--- 320
Query: 380 VPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGEL-ECFKHYEMLLDIQNVFKE-- 436
+++ Q +L Y D+ L+ +Y L E K + +LD+ V K+
Sbjct: 321 ---------SKLDQEEKEKELCYGMSGDLCSLSTTYPALREMEKQAQGILDLLQVDKQVR 371
Query: 437 --------------PK---GGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDA 479
P+ GLS L + +LG L+KT + SNWE+RPL + Q+ YAA DA
Sbjct: 372 MGVSSSLPSFITKSPRQAEKGLSLLVQNLLGKPLDKTEQLSNWEKRPLREEQILYAASDA 431
Query: 480 VVLLQIFHHVRSCSQPT 496
LL+++ + C P
Sbjct: 432 YCLLEVYEML--CKDPA 446
>gi|354604512|ref|ZP_09022501.1| hypothetical protein HMPREF9450_01416 [Alistipes indistinctus YIT
12060]
gi|353347091|gb|EHB91367.1| hypothetical protein HMPREF9450_01416 [Alistipes indistinctus YIT
12060]
Length = 191
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 97/179 (54%), Gaps = 23/179 (12%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
+I+ VD +A ++ ++G D E +P++ KG NKVS++Q++S E F+F L
Sbjct: 24 EIVVVDTPAAFEEACAYLATQPLIGFDTETRPSFSKGV-TNKVSLLQLSSGERAFLFRLN 82
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHY--EMLLDIQN 432
K+A L+ L R+++SP + K+G + D+K L+ +H+ + +D+Q+
Sbjct: 83 KIA------LEKPLLRLMESPSVTKIGAAIRDDLKG-------LQKLRHFTPKGFIDLQS 129
Query: 433 VFKEPKGGLSGLAEKILGA-----GLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
+ + G++ L+ + + A ++K +R SNWE L+ Q YAA DA V +I+
Sbjct: 130 IVGQ--YGITDLSLRKMAAITLQIKVSKAQRLSNWEAANLTPAQQLYAATDAWVSREIY 186
>gi|307104422|gb|EFN52676.1| hypothetical protein CHLNCDRAFT_54323 [Chlorella variabilis]
Length = 529
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 83/161 (51%), Gaps = 13/161 (8%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
V ID EWKP G +V++MQ+AS + + + +L +P L + L P
Sbjct: 156 CVAIDLEWKPEGWAGGGPTRVALMQLASATVAVLVRVCRLGFRMPPSLRA----FLSDPD 211
Query: 397 ILKLGYNF-QCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKG----GLSGLAEKILGA 451
+ +G+++ D ++ ++GE + + LD+Q V G GL+ L +++LG
Sbjct: 212 LTFIGFSWDSSDEVKMRQTFGEGR-RELFPRFLDLQQVGAS-LGYHGFGLAALTKRVLGF 269
Query: 452 GLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
L K R+ SNWE R LS Q++Y ALDAVV IF +R
Sbjct: 270 ALPKCRKVTMSNWEARQLSARQVQYGALDAVVTGHIFRGLR 310
>gi|329962096|ref|ZP_08300107.1| 3'-5' exonuclease [Bacteroides fluxus YIT 12057]
gi|328530744|gb|EGF57602.1| 3'-5' exonuclease [Bacteroides fluxus YIT 12057]
Length = 231
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 93/176 (52%), Gaps = 19/176 (10%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
KA+ +++GC ++GID E +P++ KG +KV+++Q++S+E F+F L +P
Sbjct: 35 KAVTYLKGCPLLGIDSETRPSFTKG-HSHKVALLQVSSEEHCFLFRLNLTGLTLP----- 88
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELE---C--FKHYEMLLDIQNVFKEPKGGL 441
+ +L++PG+ K+G + + D L H E C + Y IQ+ L
Sbjct: 89 -IITLLETPGVTKVGLSLRDDFMML-HKRAPFEQRACIELQEYVRTFGIQD------KSL 140
Query: 442 SGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
+ + G ++K++R SNWE LS++Q YAA DA L I++ ++ + D
Sbjct: 141 QKIYGILFGEKISKSQRLSNWEADVLSESQKLYAATDAWACLNIYNKLQELKRTGD 196
>gi|195401270|ref|XP_002059237.1| GJ16284 [Drosophila virilis]
gi|194156111|gb|EDW71295.1| GJ16284 [Drosophila virilis]
Length = 621
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 26/209 (12%)
Query: 310 ELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVF 369
+L E ++ VD + + H++ +++ +D EW N C N++ ++QIA+ V+
Sbjct: 399 DLPDECLLIVDTAATFERMLQHLQREQIIYMDSEWMQNV---CAQNQLCLLQIATTHNVY 455
Query: 370 IFDLIKLAEDVPDVLDSCL-TRILQSPGILKLGYNFQCDIKQLAHSYG---ELECFKHYE 425
+ D + + + + L + +P ILK+G++ D+ L S L HY
Sbjct: 456 LIDCLASRQALHEEHWRALGANVFNNPNILKVGFSMLNDLSVLQRSLPLQLRLHMPHHY- 514
Query: 426 MLLDIQNVFKE---------PKG-------GLSGLAEKILGAGLNKTRRNSNWEQRPLSQ 469
LD++NV+ E P G L+ L+ LG LNK + SNW RPL +
Sbjct: 515 --LDLRNVWLELKKRHGVELPYGNVNRAGDALTDLSMLCLGKKLNKANQCSNWANRPLRR 572
Query: 470 NQLEYAALDAVVLLQIFHHVRSCSQPTDV 498
Q+ YAA+DA LL I+ + SC +V
Sbjct: 573 EQILYAAIDARCLLLIYDCLMSCVADINV 601
>gi|384494557|gb|EIE85048.1| hypothetical protein RO3G_09758 [Rhizopus delemar RA 99-880]
Length = 1413
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 79/156 (50%), Gaps = 17/156 (10%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASD--EMVFIFDLIKLAEDVPDVLDSCLTRILQ- 393
V GID EW P + K ++MQIASD +F+ DL L +L + +ILQ
Sbjct: 1028 VCGIDTEWVPAFATLGNPVKTALMQIASDIGGYIFLLDLKTLLSSENKMLYKLVEKILQF 1087
Query: 394 ---SPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPK----------GG 440
ILK+ ++F D + L S + + + LLD++++ PK GG
Sbjct: 1088 LFEDEEILKIAFDFTGDFQLLYQSIPSSKSW-NVAKLLDLKSLTSPPKPNAENGQPITGG 1146
Query: 441 LSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAA 476
L+G+ LG LNK ++ SNWE+RPL++ Q YA
Sbjct: 1147 LAGVVSTYLGCTLNKRQQISNWEKRPLTEEQAIYAG 1182
>gi|167751882|ref|ZP_02424009.1| hypothetical protein ALIPUT_00124 [Alistipes putredinis DSM 17216]
gi|167660123|gb|EDS04253.1| 3'-5' exonuclease [Alistipes putredinis DSM 17216]
Length = 203
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 96/179 (53%), Gaps = 19/179 (10%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
I+ VD L +A ++ V+G D E +P++ G +N+V+++Q++S E F+F L K
Sbjct: 28 IVVVDSEPRLREACRYLAAQPVIGFDTETRPSFRAGV-VNRVALLQLSSPEQSFLFRLCK 86
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEM--LLDIQNV 433
+ LD + +IL++ ILK+G + + D++ L + +H++ +D+Q +
Sbjct: 87 IP------LDKAIVKILENKEILKIGADVKGDLRALHN-------IRHFQEAGFVDLQEL 133
Query: 434 FKE---PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
E + L L+ +LG ++K +R SNWE L+ Q YAA DA V +I+ +
Sbjct: 134 AGEWGIEEKSLRKLSAIVLGQRVSKAQRLSNWEAAQLTDKQQFYAATDAWVCTRIYDRL 192
>gi|359490814|ref|XP_002271858.2| PREDICTED: probable exonuclease mut-7 homolog [Vitis vinifera]
Length = 513
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 31/178 (17%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIA-----------SDEMVFIFDLIKLAEDVPDVLD 385
++G+D EWKP + VS++Q+A + +VF+ DL ++ +
Sbjct: 28 LIGLDAEWKPIRTQQSSFPTVSLLQLACQLGPRLGPDSAKSLVFLLDLSAISLSS---IY 84
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHSYGELEC---FKHYEMLLDIQNVF-------- 434
L + SP +LKLG+ F+ D+ L+ ++ C F E LDI +++
Sbjct: 85 ELLRDVFVSPDVLKLGFRFKQDLIYLSSTFCSQGCDPGFDRVEPFLDITSIYNYLQHKSL 144
Query: 435 -----KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
KE K L+ + +++LG L+K + S+W RPL++ Q YAA DA LL+IF+
Sbjct: 145 GRRIPKETKS-LASICKELLGISLSKELQCSDWSHRPLTEEQKTYAATDAHCLLEIFN 201
>gi|302143936|emb|CBI23041.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 31/178 (17%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIA-----------SDEMVFIFDLIKLAEDVPDVLD 385
++G+D EWKP + VS++Q+A + +VF+ DL ++ +
Sbjct: 28 LIGLDAEWKPIRTQQSSFPTVSLLQLACQLGPRLGPDSAKSLVFLLDLSAISLSS---IY 84
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHSYGELEC---FKHYEMLLDIQNVF-------- 434
L + SP +LKLG+ F+ D+ L+ ++ C F E LDI +++
Sbjct: 85 ELLRDVFVSPDVLKLGFRFKQDLIYLSSTFCSQGCDPGFDRVEPFLDITSIYNYLQHKSL 144
Query: 435 -----KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
KE K L+ + +++LG L+K + S+W RPL++ Q YAA DA LL+IF+
Sbjct: 145 GRRIPKETKS-LASICKELLGISLSKELQCSDWSHRPLTEEQKTYAATDAHCLLEIFN 201
>gi|429740976|ref|ZP_19274645.1| 3'-5' exonuclease [Porphyromonas catoniae F0037]
gi|429159645|gb|EKY02142.1| 3'-5' exonuclease [Porphyromonas catoniae F0037]
Length = 254
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 88/180 (48%), Gaps = 27/180 (15%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
KA+ I VGID E +P++ G + + VS++QIA+DE F+F L + L
Sbjct: 86 RKAVAKIRRASCVGIDTETRPSFKAGVRYD-VSLLQIATDEECFLFRLNMIG------LT 138
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQL-------AHSYGELE--CFKHYEMLLDIQNVFKE 436
L +L+ P ILK+G + + D+ L A S+ EL+ C + L + ++
Sbjct: 139 KSLIGLLEDPSILKVGLSLKDDLSALNRRETFTAASFVELQRLCGGYGIRELSLLKIY-- 196
Query: 437 PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPT 496
I ++K +R SNWE + LS Q+ YAALDA L+I+ + + P+
Sbjct: 197 ---------AIIFAERMSKAQRMSNWEDKVLSPAQIHYAALDAWASLRIYQTLLASPTPS 247
>gi|195114732|ref|XP_002001921.1| GI14516 [Drosophila mojavensis]
gi|193912496|gb|EDW11363.1| GI14516 [Drosophila mojavensis]
Length = 625
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 26/209 (12%)
Query: 310 ELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVF 369
+L E +I VD ++ + H++ ++ +D EW N C N++ ++QIA+ V+
Sbjct: 403 DLPDECLIIVDSFPIFNRMLKHLQREHIIYLDSEWMQNV---CAQNQLCLLQIATTCNVY 459
Query: 370 IFDLIKLAEDVPDVLDSCL-TRILQSPGILKLGYNFQCDIKQLAHSYG---ELECFKHYE 425
+ D + + + L + +P ILK+G++ D+ L S L HY
Sbjct: 460 LIDCLASRPALEEQHWRALGATVFNNPNILKVGFSMLNDLSVLQRSLPLQLRLHMPHHY- 518
Query: 426 MLLDIQNVFKEPK----------------GGLSGLAEKILGAGLNKTRRNSNWEQRPLSQ 469
LD++NV+ E K L+ L+ LG LNKT + SNW RPL +
Sbjct: 519 --LDLRNVWLELKKRQGVELPFGNVNRAGDALTDLSMLCLGKKLNKTNQCSNWANRPLRR 576
Query: 470 NQLEYAALDAVVLLQIFHHVRSCSQPTDV 498
Q+ YAA+DA LL I+ + SC +V
Sbjct: 577 EQILYAAIDARCLLLIYACLSSCVPDINV 605
>gi|268573488|ref|XP_002641721.1| C. briggsae CBR-MUT-7 protein [Caenorhabditis briggsae]
Length = 896
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 113/210 (53%), Gaps = 23/210 (10%)
Query: 338 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKL-AEDVPDVLDSCLTR-ILQSP 395
VG D EWKP+ + +K++I+Q+ + V + D ++L E VPD+L + + ++P
Sbjct: 430 VGFDSEWKPSNLITANSSKIAIIQLFFKDKVLLVDCVELEKEKVPDLLWERFAKGLFETP 489
Query: 396 GILKLGYNFQCDIK---QLAHSYGEL---------ECFKHYEMLLDIQ-NVFKEPKGG-- 440
+ +G++ + D++ +L G L + + E + DI ++ + PK
Sbjct: 490 KLKLIGFDMRNDLEAIIELPALKGRLNLEQIKNAYDLKRLAENICDIDMDILELPKKTFK 549
Query: 441 LSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSE 500
L+ L + +LG L+KT + SNW+ RPL + Q+ YAALDAVV++ F + +Q E
Sbjct: 550 LADLTQYLLGQVLDKTEQCSNWQCRPLRKKQILYAALDAVVVVNTFKKILEKTQ-----E 604
Query: 501 GHDKIEWKSYIV-SHMDNPKKSKKRPTIKK 529
++ ++ S + S++ PKK + + ++K
Sbjct: 605 RNEDVDVPSVVKNSNVLAPKKERDQKVMRK 634
>gi|15237941|ref|NP_197822.1| 3'-5' exonuclease domain-containing protein [Arabidopsis thaliana]
gi|10177895|dbj|BAB11227.1| unnamed protein product [Arabidopsis thaliana]
gi|30102678|gb|AAP21257.1| At5g24340 [Arabidopsis thaliana]
gi|110743600|dbj|BAE99637.1| hypothetical protein [Arabidopsis thaliana]
gi|332005912|gb|AED93295.1| 3'-5' exonuclease domain-containing protein [Arabidopsis thaliana]
Length = 505
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 29/174 (16%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIA---------SDEMVFIFDLIKLAEDVPDVLDSC 387
++ +D EWKP + V+++Q+A SD VF+ DL + +P V +
Sbjct: 30 IIALDAEWKPQHSNTSSFPTVTLLQVACRLSHATDVSD--VFLIDLSSI--HLPSVWE-L 84
Query: 388 LTRILQSPGILKLGYNFQCDIKQLAHSYGELEC---FKHYEMLLDIQNVF---------- 434
L + SP +LKLG+ F+ D+ L+ ++ + C F+ + LDI +++
Sbjct: 85 LNDMFVSPDVLKLGFRFKQDLVYLSSTFTQHGCEGGFQEVKQYLDITSIYNYLQHKRFGR 144
Query: 435 KEPKG--GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
K PK L+ + +++L L+K + S+W RPL++ Q YAA DA LLQIF
Sbjct: 145 KAPKDIKSLAAICKEMLDISLSKELQCSDWSYRPLTEEQKLYAATDAHCLLQIF 198
>gi|371775971|ref|ZP_09482293.1| 3'-5' exonuclease [Anaerophaga sp. HS1]
Length = 195
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 89/166 (53%), Gaps = 19/166 (11%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
K++G D E KP++ KG N +S++Q++++E F+F L + LTR+L +P
Sbjct: 43 KIIGFDTETKPSFKKGVS-NNISLLQLSTEEEAFLFRLNITG------FNGELTRLLSNP 95
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGG-----LSGLAEKILG 450
I K+G + D++ L L+ F + +DIQ + PK G L LA +LG
Sbjct: 96 KIKKIGVGIRDDLRGLQR----LKKFTP-KGFVDIQEL--APKYGIEVLSLKSLAGLLLG 148
Query: 451 AGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPT 496
++K +R SNWE LS+ Q YAA DA L+I++ +++ T
Sbjct: 149 IRISKRQRLSNWEADALSEGQKLYAATDAWAALKIYNKIKNMKPVT 194
>gi|319901369|ref|YP_004161097.1| 3'-5' exonuclease [Bacteroides helcogenes P 36-108]
gi|319416400|gb|ADV43511.1| 3'-5' exonuclease [Bacteroides helcogenes P 36-108]
Length = 220
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 91/171 (53%), Gaps = 9/171 (5%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
KA+ +++ C ++GID E +P++ KG + +KV+++Q++S+E F+F L +P
Sbjct: 35 KAVAYLKSCTLLGIDSETRPSFTKG-QSHKVALLQVSSEEHCFLFRLNLTGLTLP----- 88
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAE 446
+ +L++P + K+G + + D L H E E L + F L +
Sbjct: 89 -VITLLENPNVTKVGLSLRDDFMML-HKRAPFEQHACIE-LQEYVRAFGIQDKSLQKIYG 145
Query: 447 KILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
+ G ++K++R SNWE LS++Q +YAA DA L I++ ++ + D
Sbjct: 146 ILFGEKISKSQRLSNWEADMLSESQKQYAATDAWACLNIYNRLQELKRTGD 196
>gi|329956986|ref|ZP_08297554.1| 3'-5' exonuclease [Bacteroides clarus YIT 12056]
gi|328523743|gb|EGF50835.1| 3'-5' exonuclease [Bacteroides clarus YIT 12056]
Length = 210
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 92/174 (52%), Gaps = 15/174 (8%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
+A+ +++ C ++GID E +P++ KG + +KV+++QI+S+E F+F L +P ++
Sbjct: 35 RAVAYLKQCSILGIDSETRPSFTKG-QSHKVALLQISSEEHCFLFRLNLTGLTLPIIM-- 91
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELE---CFKHYEMLLDIQNVFKEPKGGLSG 443
+L++PG+ K+G + + D L H E C + E + F L
Sbjct: 92 ----LLENPGVTKVGLSLRDDFMML-HKRAPFEQRACIELQEYV----RTFGIQDKSLQK 142
Query: 444 LAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
+ + ++K++R SNWE L+ +Q +YAA DA L I++ ++ + D
Sbjct: 143 IYAILFKEKISKSQRLSNWEAEVLTPSQQQYAATDAWACLNIYNRLQELKRTGD 196
>gi|301627207|ref|XP_002942768.1| PREDICTED: probable exonuclease mut-7 homolog [Xenopus (Silurana)
tropicalis]
Length = 654
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 90/196 (45%), Gaps = 42/196 (21%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTR----- 390
+VVG+D EW+P + G VS++Q+A E VF+ DL++L + TR
Sbjct: 291 QVVGVDMEWRPMF-GGLGKQTVSLVQLALREEVFLLDLLQLNAPGAGANGTQRTREELIR 349
Query: 391 ----ILQSPGILKLGYNFQCDIKQLAHSYGE-LECFKHYEMLLDIQNVFKE-------PK 438
+ I KL Y+ DI+ L + E L K +LD+ V K+ P+
Sbjct: 350 FIKDLFLCAAITKLSYSVLGDIQNLEATDPEFLGLEKQTRGILDLYTVHKQLQRVPHRPR 409
Query: 439 G------------------------GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEY 474
G GLS L ILG L+KT + SNW++RPL + Q+ Y
Sbjct: 410 GKREPVDVLADGPPSEDGLAPQSEKGLSLLVRDILGKPLDKTEQLSNWDKRPLREQQILY 469
Query: 475 AALDAVVLLQIFHHVR 490
AA DA LL+++ +R
Sbjct: 470 AAADAYCLLEVYDVLR 485
>gi|313673321|ref|YP_004051432.1| 3'-5' exonuclease [Calditerrivibrio nitroreducens DSM 19672]
gi|312940077|gb|ADR19269.1| 3'-5' exonuclease [Calditerrivibrio nitroreducens DSM 19672]
Length = 201
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 96/178 (53%), Gaps = 15/178 (8%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
+I+++D + L + + K+VG D E KP++ K K N +S++QIA++ F+F L
Sbjct: 32 EILYIDSDEKLKE--IKLPEDKLVGFDTETKPSFKKKIK-NHLSLIQIATENKAFLFHLK 88
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF 434
++ + S + L +P I K+G DIK++ + +E K+ +D+Q +
Sbjct: 89 QIKDK------SIIFEYLNNPEITKIGAGIADDIKKI-NELSNIEILKN--SFMDLQFIA 139
Query: 435 KE---PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
K+ P+ L L+ L + K+ + SNW++ PL+ Q+ YAA DA + L+I+ +
Sbjct: 140 KQMNLPRTNLRFLSAYFLNKRIIKSSQTSNWDKYPLTPKQMLYAATDAWICLKIYKKI 197
>gi|302810633|ref|XP_002987007.1| hypothetical protein SELMODRAFT_425875 [Selaginella moellendorffii]
gi|300145172|gb|EFJ11850.1| hypothetical protein SELMODRAFT_425875 [Selaginella moellendorffii]
Length = 797
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 89/189 (47%), Gaps = 26/189 (13%)
Query: 319 VDEVDG--LHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIA--------SDEMV 368
VD +DG + ++ V+ +D EWKP V G +VS++QIA ++V
Sbjct: 18 VDSIDGEAFQGFLLALQESSVIALDAEWKPVSVAGTH-PRVSLLQIACRKRDFGPESDLV 76
Query: 369 FIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLL 428
FI D++ + L L L++ ILKLG+ + D+ LA S F E +
Sbjct: 77 FIVDVLSIPASA---LLQPLEEALETSRILKLGFKLRQDLINLAASLSSTASFS-CEPYI 132
Query: 429 DIQNVFKEPK-----------GGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAAL 477
DI ++ E K LS + + G L K+ + S+WE RPL++ Q+ YAA
Sbjct: 133 DIGKLYHEVKRKNPRKLPGDTPSLSHICRDVFGRPLCKSLQCSDWELRPLTEEQISYAAA 192
Query: 478 DAVVLLQIF 486
DA LL I
Sbjct: 193 DAHCLLAIL 201
>gi|302807740|ref|XP_002985564.1| hypothetical protein SELMODRAFT_122415 [Selaginella moellendorffii]
gi|300146770|gb|EFJ13438.1| hypothetical protein SELMODRAFT_122415 [Selaginella moellendorffii]
Length = 442
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 26/197 (13%)
Query: 311 LVVEDIIWVDEVDG--LHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIA----- 363
L I VD +DG + ++ V+ +D EWKP V G +VS++QIA
Sbjct: 10 LPPSSIRLVDSIDGEAFQGFLLALQESSVIALDAEWKPVLVAGMH-PRVSLLQIACRKRD 68
Query: 364 ---SDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELEC 420
++VFI D++ + L L L++ ILKLG+ + D+ LA S
Sbjct: 69 FGPESDLVFIVDVLSIPASA---LLQPLEEALETSRILKLGFKLRQDLINLAASLSSTAS 125
Query: 421 FKHYEMLLDIQNVFKEPK-----------GGLSGLAEKILGAGLNKTRRNSNWEQRPLSQ 469
F E +DI ++ E K LS + + G L K+ + S+WE RPL++
Sbjct: 126 FS-CEPYIDIGKLYHEVKRKNPRKLPGDTPSLSHICRDVFGRPLCKSLQCSDWELRPLTE 184
Query: 470 NQLEYAALDAVVLLQIF 486
Q+ YAA DA LL I
Sbjct: 185 EQISYAAADAHCLLAIL 201
>gi|317480691|ref|ZP_07939778.1| 3'-5' exonuclease [Bacteroides sp. 4_1_36]
gi|316903198|gb|EFV25065.1| 3'-5' exonuclease [Bacteroides sp. 4_1_36]
Length = 207
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 90/171 (52%), Gaps = 9/171 (5%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
KA+ +++ C ++GID E +P++ KG +++KV+++QI+S+E F+F L +P
Sbjct: 35 KAVAYLKSCPLLGIDSETRPSFTKG-QIHKVALLQISSEEHCFLFRLNLTGLTLP----- 88
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAE 446
+ +L++P + K+G + + D L H E E L + F L +
Sbjct: 89 -VITLLENPSVTKVGLSLRDDFMML-HKRAPFEQHACIE-LQEYVRAFGIQDKSLQKIYA 145
Query: 447 KILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
+ G ++K++R SNWE L++ Q YAA DA L I++ ++ + D
Sbjct: 146 ILFGEKISKSQRLSNWEAETLTEPQKLYAATDAWACLNIYNRLQELKRTGD 196
>gi|313887168|ref|ZP_07820864.1| 3'-5' exonuclease [Porphyromonas asaccharolytica PR426713P-I]
gi|332300419|ref|YP_004442340.1| 3'-5' exonuclease [Porphyromonas asaccharolytica DSM 20707]
gi|312923397|gb|EFR34210.1| 3'-5' exonuclease [Porphyromonas asaccharolytica PR426713P-I]
gi|332177482|gb|AEE13172.1| 3'-5' exonuclease [Porphyromonas asaccharolytica DSM 20707]
Length = 206
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 94/186 (50%), Gaps = 18/186 (9%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
+I+ VD + + A+ +E C ++G+D E KP + K + V+++Q++S+ ++F +
Sbjct: 21 EIVVVDSLPQVESAVAALEQCAIIGMDTESKPVF-KKYERQSVALIQLSSESCCYLFRIN 79
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF 434
K+ +P L L R ILK+G + D +QL EL H + +D+Q +
Sbjct: 80 KIG--IPPRLQGLLER----EDILKVGLDLCGDRRQLRRFSPEL----HPQGFVDLQRL- 128
Query: 435 KEPKGGLSGLAEK-----ILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
P G+ L + + G ++K + +NWE L+ Q YAALDA L+I+H +
Sbjct: 129 -TPAYGIHDLGLQKIYAILFGEKISKRAQLTNWEAATLTPAQQSYAALDAYACLRIYHRL 187
Query: 490 RSCSQP 495
S P
Sbjct: 188 ESEPMP 193
>gi|167765134|ref|ZP_02437247.1| hypothetical protein BACSTE_03520 [Bacteroides stercoris ATCC
43183]
gi|167696762|gb|EDS13341.1| 3'-5' exonuclease [Bacteroides stercoris ATCC 43183]
Length = 210
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
+A+ +++ C ++GID E +P++ KG + +KV+++QI+S+E F+F L +P +
Sbjct: 35 RAVAYLKKCSILGIDSETRPSFTKG-QSHKVALLQISSEEHCFLFRLNLTGLTLPVIT-- 91
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELE---CFKHYEMLLDIQNVFKEPKGGLSG 443
+L++P + K+G + + D L H E C + E + F L
Sbjct: 92 ----LLETPAVTKVGLSLRDDFMML-HKRAPFEQRGCIELQEYV----RTFGIQDRSLQK 142
Query: 444 LAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
+ + G ++K++R SNWE L+ +Q +YAA DA L I++ ++ + D
Sbjct: 143 IYAILFGEKISKSQRLSNWEADVLTPSQQQYAATDAWACLNIYNRLQELKRTGD 196
>gi|320165962|gb|EFW42861.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 1379
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 17/165 (10%)
Query: 330 CHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLT 389
H V+G D EW+P + + N V++MQI+++E ++ + P L S L
Sbjct: 773 THFSKTNVIGFDAEWRPE--QKNEFNGVAVMQISTEEACLLYQ-----RNGPGALPSQLL 825
Query: 390 RILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQN----VFKE--PKGGLSG 443
R+L +LK+G D+K++ ++G L +E +++ VFK+ + GL
Sbjct: 826 RLLTDTSVLKVGVGVADDLKRVQRAFG-LPKQTQFEPAVELGTWSRLVFKDLPTQPGLKS 884
Query: 444 LAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIF 486
LA G LNK++R S W + PLS NQL YA DA + IF
Sbjct: 885 LA-AYCGVALNKSKRITMSAWNRIPLSTNQLIYAVQDAWISFFIF 928
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 30/211 (14%)
Query: 282 CERYSLEGFLKTREPEAGFVHSRFLHLKELVVEDIIWVDEVDGLHKAIC-HIEGCKVVGI 340
C +S + KT+ P F S K + D+++ ++ I H ++G+
Sbjct: 283 CTHHSTLIWYKTQLPALLFQQS-----KAVFPVDVLYTTSEQAANEYIQEHFATTSLIGL 337
Query: 341 DCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKL 400
D EW P + + + N VS++Q+A++ ++ ++ + L S L ++L + +LK+
Sbjct: 338 DLEWHPEF-QAKQFNGVSLIQLATETKCLLYHQPRV-----ESLPSELAKLLANRAVLKV 391
Query: 401 GYNFQCDIKQLAHSYGELECFK----HYEMLLDIQN----VFKEPKG--GLSGLAEKILG 450
G D+ +L + C H E + D+ VF + +G GL LA + G
Sbjct: 392 GIGISNDLARLRRA-----CINSGHVHLESIFDLGALSLLVFSDLRGAPGLRSLATRC-G 445
Query: 451 AGLNKTRR--NSNWEQRPLSQNQLEYAALDA 479
+NK ++ S W++ PL+ QL YA DA
Sbjct: 446 LAINKAKQVSMSAWDRIPLNHTQLVYAVQDA 476
>gi|440747264|ref|ZP_20926524.1| 3'- 5' exonuclease domain protein [Mariniradius saccharolyticus
AK6]
gi|436484510|gb|ELP40502.1| 3'- 5' exonuclease domain protein [Mariniradius saccharolyticus
AK6]
Length = 199
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 95/177 (53%), Gaps = 18/177 (10%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
DI+ VD ++ + + + IE K +G D E KP++ KG + +KV++MQ+A++++ F+ +
Sbjct: 22 DIVLVDRMEQVREVLDEIERHKHLGFDTETKPSFTKGTQ-HKVALMQLATEDIAFLIRIN 80
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLA---HSYGELECFKHYEML--LD 429
++ VP+ L +LQS + K+G D++ L + F + L +
Sbjct: 81 QIG--VPE----ELLEVLQSRSVTKIGAAVLDDLRALQKIKRGFVPGNFFDLNDELKKVG 134
Query: 430 IQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
QNV G+ LA +L ++K+ + SNWE L++ Q+ YAA DA LQ+F
Sbjct: 135 FQNV------GVRNLAAMVLNMRISKSEQVSNWEASTLTEKQMVYAATDAWACLQVF 185
>gi|268573492|ref|XP_002641723.1| Hypothetical protein CBG10060 [Caenorhabditis briggsae]
Length = 729
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 121/247 (48%), Gaps = 18/247 (7%)
Query: 291 LKTREPEAGFVHSRFLHLKE--LVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNY 348
L+T +PE F+ E ++ + E++ L + +E VG D E++P +
Sbjct: 342 LRTSQPEEEVTEQLFVFENEQKYPIKIVKTESELEDLCVEMDEVENGTFVGYDSEFRPGH 401
Query: 349 VKGCKMNKVSIMQIASDEMVFIFDLIKLA-EDVPDVLDSCLTR-ILQSPGILKLGYNFQC 406
+ KV+ +Q+ + ++ D ++L E +PD + L + I +S + +G++ +
Sbjct: 402 LTDTNTIKVATIQLCFHDTTYLIDCVELENEKLPDKMWIRLYQSIFESKKLTVVGFDLKH 461
Query: 407 DIKQLAHSYGELECFK------------HYEMLLDIQ-NVFKEPKG-GLSGLAEKILGAG 452
DI+ L + + FK E+L++I N+ K L L+E++L
Sbjct: 462 DIEALFSIHPIRQQFKIEDIENFVCVRRFSEILMEIDINILNLSKSCRLVNLSEELLDIT 521
Query: 453 LNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSEGHDKIEWKSYIV 512
++K+ +N NW RPL ++Q+ YA +D+VV+L++F V +Q + DK+ +S +
Sbjct: 522 IDKSEQNGNWMSRPLRKSQIVYATMDSVVVLKVFEKVLELAQKYEQPLEIDKLMEESRVA 581
Query: 513 SHMDNPK 519
+ M K
Sbjct: 582 AFMKKEK 588
>gi|160889123|ref|ZP_02070126.1| hypothetical protein BACUNI_01544 [Bacteroides uniformis ATCC 8492]
gi|270296116|ref|ZP_06202316.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|156861130|gb|EDO54561.1| 3'-5' exonuclease [Bacteroides uniformis ATCC 8492]
gi|270273520|gb|EFA19382.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 207
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 90/171 (52%), Gaps = 9/171 (5%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
KA+ +++ C ++GID E +P++ KG +++KV+++QI+S+E F+F L +P
Sbjct: 35 KAVAYLKSCPLLGIDSETRPSFTKG-QIHKVALLQISSEEHCFLFRLNLTGLTLP----- 88
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAE 446
+ +L++P + K+G + + D L H E E L + F L +
Sbjct: 89 -VITLLENPSVTKVGLSLRDDFMML-HKRAPFEQHACIE-LQEYVRAFGIQDKSLQKIYA 145
Query: 447 KILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
+ G ++K++R SNWE L++ Q YAA DA L I++ ++ + D
Sbjct: 146 ILFGEKISKSQRLSNWEAETLTEPQKLYAATDAWACLNIYNKLQELKRTGD 196
>gi|423303634|ref|ZP_17281633.1| hypothetical protein HMPREF1072_00573 [Bacteroides uniformis
CL03T00C23]
gi|423307643|ref|ZP_17285633.1| hypothetical protein HMPREF1073_00383 [Bacteroides uniformis
CL03T12C37]
gi|392687998|gb|EIY81289.1| hypothetical protein HMPREF1072_00573 [Bacteroides uniformis
CL03T00C23]
gi|392689512|gb|EIY82789.1| hypothetical protein HMPREF1073_00383 [Bacteroides uniformis
CL03T12C37]
Length = 207
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 90/171 (52%), Gaps = 9/171 (5%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
KA+ +++ C ++GID E +P++ KG +++KV+++QI+S+E F+F L +P
Sbjct: 35 KAVAYLKSCPLLGIDSETRPSFTKG-QIHKVALLQISSEEHCFLFRLNLTGLTLP----- 88
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAE 446
+ +L++P + K+G + + D L H E E L + F L +
Sbjct: 89 -VITLLENPSVTKVGLSLRDDFMML-HKRAPFEQHACIE-LQEYVRAFGIQDKSLQKIYA 145
Query: 447 KILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
+ G ++K++R SNWE L++ Q YAA DA L I++ ++ + D
Sbjct: 146 ILFGEKISKSQRLSNWEAETLTEPQKLYAATDAWACLNIYNKLQELKRTGD 196
>gi|308501869|ref|XP_003113119.1| CRE-MUT-7 protein [Caenorhabditis remanei]
gi|308265420|gb|EFP09373.1| CRE-MUT-7 protein [Caenorhabditis remanei]
Length = 943
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 84/173 (48%), Gaps = 25/173 (14%)
Query: 338 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAED-VPDVLDSCLTRILQSPG 396
VG D EWKP+ + +K++I+Q+ + V++ D ++L E +PD R L
Sbjct: 447 VGFDSEWKPSNLTSINSSKIAIIQLYFKDKVYLVDCVQLEEKRLPDERWQEFARQLFGSK 506
Query: 397 ILK-LGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF-------------------KE 436
LK +G++ + D+ + L + + IQN F K
Sbjct: 507 NLKIIGFDMRNDLDAII----ALPALRETLAIDSIQNCFDLKRLAENICEIDMEILDLKR 562
Query: 437 PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L+ L + +LG L+KT + SNW+ RPL +NQL YAALDAVV++ F +
Sbjct: 563 KTFKLADLTQSLLGQTLDKTEQCSNWQSRPLRKNQLLYAALDAVVVVLTFEKI 615
>gi|154494239|ref|ZP_02033559.1| hypothetical protein PARMER_03589 [Parabacteroides merdae ATCC
43184]
gi|423724766|ref|ZP_17698908.1| hypothetical protein HMPREF1078_02805 [Parabacteroides merdae
CL09T00C40]
gi|154086101|gb|EDN85146.1| 3'-5' exonuclease [Parabacteroides merdae ATCC 43184]
gi|409236726|gb|EKN29532.1| hypothetical protein HMPREF1078_02805 [Parabacteroides merdae
CL09T00C40]
Length = 193
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 94/180 (52%), Gaps = 19/180 (10%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
II +D + + KA+ ++ + VG D E +P++ KG + K+S+MQI++DE F+F L +
Sbjct: 26 IIVIDTLRDVEKAVGYLSEFQSVGFDTETRPSFKKGQRY-KISLMQISTDEACFLFRLNR 84
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYE--MLLDIQNV 433
+ +P+ L+ L + +LK+G + + D +G + + LD+QN
Sbjct: 85 IG--IPEALEEFLA----NEKVLKIGLSLRDD-------FGAMRKRTDIQPANFLDLQNY 131
Query: 434 ---FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
F L + + ++K +R SNWE LS Q +YAALDA L+I++ ++
Sbjct: 132 VGQFGIEDASLQKIYAILFNKKISKGQRLSNWEADVLSDAQKKYAALDAWACLKIYNQLK 191
>gi|398343905|ref|ZP_10528608.1| ribonuclease III [Leptospira inadai serovar Lyme str. 10]
Length = 389
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 91/187 (48%), Gaps = 27/187 (14%)
Query: 312 VVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIF 371
+ D I VD + L A+ + + ID E Y +KV ++QI+S +IF
Sbjct: 3 IQSDYIVVDNIRSLQLALITLAQSDCISIDTESSGYY---TYYSKVCLIQISSKGKNYIF 59
Query: 372 DLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEM----- 426
D I+LA DV S L + ++P ILK+ ++ DIK L + FK +
Sbjct: 60 DPIRLA----DV--SGLGPLFENPAILKIFHSASDDIKALKRDF----SFKFVNIADTMF 109
Query: 427 ---LLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLL 483
LLD++ + L L E L+K + SNWE+RPL ++QL+YAALD V L
Sbjct: 110 SSRLLDLE------QNSLLYLVEHYHKVKLSKKEQKSNWEKRPLDKSQLQYAALDTVYLE 163
Query: 484 QIFHHVR 490
I+ +R
Sbjct: 164 SIWEKMR 170
>gi|398348927|ref|ZP_10533630.1| ribonuclease III [Leptospira broomii str. 5399]
Length = 389
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 91/187 (48%), Gaps = 27/187 (14%)
Query: 312 VVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIF 371
+ D I VD V L A+ + + ID E Y +KV ++QI+S +IF
Sbjct: 3 IQSDYIVVDNVRSLQLALITLGQSDCISIDTESSGYY---TYYSKVCLIQISSKGKNYIF 59
Query: 372 DLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEM----- 426
D I+LA DV S L + ++P ILK+ ++ DIK L + FK +
Sbjct: 60 DPIRLA----DV--SGLGPLFENPAILKIFHSASDDIKALKRDF----SFKFVNIADTMF 109
Query: 427 ---LLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLL 483
LLD++ + L L E L+K + SNWE+RPL ++QL+YAALD V L
Sbjct: 110 SSRLLDLE------QNSLLYLVEHYHKVKLSKKEQKSNWEKRPLDKSQLQYAALDTVYLE 163
Query: 484 QIFHHVR 490
I+ +R
Sbjct: 164 SIWEKMR 170
>gi|255086371|ref|XP_002509152.1| predicted protein [Micromonas sp. RCC299]
gi|226524430|gb|ACO70410.1| predicted protein [Micromonas sp. RCC299]
Length = 1227
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 125/307 (40%), Gaps = 57/307 (18%)
Query: 234 GKPILLKRLAEKACWDIAE----------AKTKGDKRLLEYLVYLAMEAGYSEKVDELCE 283
G+ L+RLA WD+AE A +G + + A AG+SE
Sbjct: 370 GREGRLRRLAAAGRWDVAEQLAGEDVQARALVRGLRDAAATVAAEANGAGWSEWAAGHGA 429
Query: 284 RYSLEGFLKTREPEAGFVHSRFLHLK-ELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDC 342
E + ++ R +L +L + W D+ L + + V+GID
Sbjct: 430 LGGGG-ASTAAEVDQSYLPRRMRYLPLDLPRGAVRWADDARSLAACVAALSLDAVIGIDS 488
Query: 343 EWKPNYVKGCKM-------------------NKVSIMQIASDEMVFIFDLIKLAEDVPDV 383
EW P+ G + +++Q++ + V + D KL + P
Sbjct: 489 EWVPDGSFGASGSSRRSGNSKGSSGARRRLESPTALLQLSGERCVALLDATKLGRECPGA 548
Query: 384 LDSCLTRIL------------------QSPGILKLGYNFQCDIKQLAHSY-GEL-ECFKH 423
S L IL + P ++ G+ D+++LA SY GE+ + +
Sbjct: 549 FASALRGILSDARGGSESTSQNDVKSARPPAVV--GFGVADDLRRLACSYPGEVADAVRS 606
Query: 424 YEMLLDIQNVFKE----PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDA 479
+L +Q + + GLS + + +LG L+K R +W +RPL+++Q+ Y A DA
Sbjct: 607 IPRVLCLQRAAIDRGHGSQPGLSSVCQALLGQPLDKRERCGDWSRRPLTESQVAYGAQDA 666
Query: 480 VVLLQIF 486
VLL+I
Sbjct: 667 RVLLRIM 673
>gi|346467133|gb|AEO33411.1| hypothetical protein [Amblyomma maculatum]
Length = 210
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 82/160 (51%), Gaps = 16/160 (10%)
Query: 351 GCKMNKVSIMQIASDEMVFIFDLIKL-AEDVPDVLDSCLTRILQSPGILKLGYNFQCDIK 409
G +K++++Q+A + VFI D+ KL AE D + +L S ILKLGY D++
Sbjct: 5 GLMPSKLALIQLAVWDCVFILDVPKLVAELQGSDWDELFSEVLSSHSILKLGYGIAEDLR 64
Query: 410 QLAHSYGELE---------CFKHYEMLLDIQNVFKE--PKGGLSGLAEK---ILGAGLNK 455
LA + C ++ D +V K PK GLAE +LG LNK
Sbjct: 65 LLADTVMRPSAKVNRVVDLCNFTQKLQRDYPSVIKPVYPKLNCKGLAELTHLMLGLPLNK 124
Query: 456 TRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHH-VRSCSQ 494
R S+WE+RPL +Q YAALDA LLQI+ V+ C +
Sbjct: 125 NERCSDWEKRPLRPSQTVYAALDAYCLLQIYEELVKRCEE 164
>gi|228471306|ref|ZP_04056112.1| 3- 5 exonuclease domain protein [Porphyromonas uenonis 60-3]
gi|228306948|gb|EEK16046.1| 3- 5 exonuclease domain protein [Porphyromonas uenonis 60-3]
Length = 206
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 93/186 (50%), Gaps = 18/186 (9%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
+I+ VD + + A+ +E C ++G+D E KP + K + V+++Q++S+ ++F +
Sbjct: 21 EIVVVDSLPQVESAVAALEQCAIIGMDTESKPVF-KKYERQSVALIQLSSESCCYLFRIN 79
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF 434
K+ +P L L R ILK+G + D +QL EL H + +D+Q +
Sbjct: 80 KIG--IPPRLQGLLER----EDILKVGLDLCGDRRQLRRFSPEL----HPQGFVDLQRL- 128
Query: 435 KEPKGGLSGLAEK-----ILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
P G+ L + + ++K + SNWE L+ Q YAALDA L+I+H +
Sbjct: 129 -TPAYGIHDLGLQKIYAILFAEKISKRAQLSNWEAATLTPAQQSYAALDAYACLRIYHRL 187
Query: 490 RSCSQP 495
S P
Sbjct: 188 ESEPMP 193
>gi|326513036|dbj|BAK03425.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 490
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 100/220 (45%), Gaps = 45/220 (20%)
Query: 325 LHKAICHIEGCKVVGIDCEWKPN--------------YVKGCKMNKVSIMQIA-----SD 365
L I + ++V D EWKP ++ V+++Q+A
Sbjct: 25 LSHLIQSLSTARIVAFDAEWKPRCRAPSAPSDDASPAPRNPAQLPTVTVLQLACRGEDGG 84
Query: 366 EMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY-GELEC---F 421
VF+ DL LA + D+ + L + + P +LKLG+ F+ D+ L+ ++ L C F
Sbjct: 85 NEVFVVDL--LAVPLADLW-APLRELFERPDVLKLGFRFKQDLVYLSATFTAALGCDSGF 141
Query: 422 KHYEMLLDIQNVFKEPKG------------GLSGLAEKILGAGLNKTRRNSNWEQRPLSQ 469
E LD+ NV+ KG L+ + E++L L+K + S+W RPLS+
Sbjct: 142 NRVEPFLDVTNVYYYLKGHDTQTRLPKETKSLASICEELLNVSLSKELQCSDWSCRPLSE 201
Query: 470 NQLEYAALDAVVLLQI---FHHVRS----CSQPTDVSEGH 502
Q++YAA DA LL I FH S CS + S+ H
Sbjct: 202 GQIQYAASDAYYLLYIFDLFHQKVSIEEKCSSTAEASDEH 241
>gi|78357431|ref|YP_388880.1| 3'-5' exonuclease [Desulfovibrio alaskensis G20]
gi|78219836|gb|ABB39185.1| 3'-5' exonuclease [Desulfovibrio alaskensis G20]
Length = 201
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 19/173 (10%)
Query: 323 DGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDL--IKLAEDV 380
D L A+ + +++G D E +P + KG KMN S++Q A+ +MV++ L + +E +
Sbjct: 36 DELEAALRALHSEELIGFDTETRPTFRKG-KMNLPSLIQFAARDMVYLIHLGWVAFSEGI 94
Query: 381 PDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE---P 437
DVL SP I+K G + DIK L +L CF+ ++D+ V +E
Sbjct: 95 QDVL--------SSPHIVKTGVAVRDDIKDLK----KLACFED-AAVVDLGEVARELGME 141
Query: 438 KGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
GL LA +L ++K + SNW LS+ Q+ YAA DA V +I +R
Sbjct: 142 THGLRNLAANLLEFRISKAAQCSNWSNLELSRQQISYAATDAWVSREIHLRMR 194
>gi|410926767|ref|XP_003976844.1| PREDICTED: probable exonuclease mut-7 homolog [Takifugu rubripes]
Length = 898
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 97/182 (53%), Gaps = 32/182 (17%)
Query: 337 VVGIDCEWKPNYVKGCKMNK-VSIMQIASDEMVFIFDLIKLAEDV---PDVLDSCLTRIL 392
VVG+D EW+P + GC ++ V++MQ+A + VF+ D+ AE P+ + S + +
Sbjct: 369 VVGVDMEWQPTF--GCSSSQQVALMQLAVTDQVFLLDVC--AEGFGQHPETV-SFIRSLF 423
Query: 393 QSPGILKLGYNFQCDIKQLAHSYGEL-ECFKHYEMLLDIQNVFKE--------------- 436
S +LKLGY+ D++ + ++ + E + +LD+ NV ++
Sbjct: 424 SSKNVLKLGYSTSGDLRCVLSTWPQFSEEPLVTQGVLDLVNVHQKIQRSKVNRTQNGSKE 483
Query: 437 -------PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
+ GLS L +++LG L+K + SNW++RPL +Q+ YA DA LL+++ +
Sbjct: 484 VLVGEGSAEKGLSLLVQQVLGRPLDKREQMSNWKKRPLRASQIRYAVADAYCLLEVYTVL 543
Query: 490 RS 491
+S
Sbjct: 544 KS 545
>gi|412985318|emb|CCO20343.1| predicted protein [Bathycoccus prasinos]
Length = 422
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 87/179 (48%), Gaps = 18/179 (10%)
Query: 307 HLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDE 366
HL EL+ E I V+ H+ V+G D E +P + K K NKV+++Q AS
Sbjct: 29 HLSELLKEKDI-TRSVESRHRYA-------VIGFDTETRPTFSKVAKKNKVALVQFASKN 80
Query: 367 MVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQL-AHSYG----ELECF 421
+ + L + VP++ +T+IL+ + LG+ + D+K+L YG E
Sbjct: 81 VACLIHLASMNGKVPEM----MTKILREKEYVLLGFGIKTDLKELKTEHYGNEDKESVDV 136
Query: 422 KHYEMLLDIQNVFKEPKGGLSGLAEKI-LGAGLNKTRRNSNWEQRPLSQNQLEYAALDA 479
+ L I VFK + G+ G+A L K + SNWE PL + Q++YAA DA
Sbjct: 137 NAFIDLATISEVFKHERPGMKGMANHFGLDVEKPKAVQISNWENSPLREGQVKYAAEDA 195
>gi|224135103|ref|XP_002321984.1| predicted protein [Populus trichocarpa]
gi|222868980|gb|EEF06111.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 92/177 (51%), Gaps = 31/177 (17%)
Query: 337 VVGIDCEWKPNYVKG----CKMNKVSIMQIA------SDEM-VFIFDLIKLAEDVPDVLD 385
++G+D EWKP ++G VS++Q+A SDE F+ DL + +P + +
Sbjct: 34 IIGLDAEWKP--IRGQTHQPTFPTVSLLQLACQLGHDSDESETFLLDLHSVP--LPSIWE 89
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHSYGELEC---FKHYEMLLDIQNVF-------- 434
L SP ILKLG+ F+ D+ L+ ++ C F E LDI +++
Sbjct: 90 -LLRETFVSPDILKLGFKFKQDLVYLSSTFCLQGCDPGFDKVEPYLDITSIYYQMQHKQQ 148
Query: 435 --KEPK--GGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
K PK L+ + +++LG L+K + S+W RPL++ Q YAA DA LL+IF+
Sbjct: 149 GRKGPKETKSLATICKEVLGISLSKELQCSDWSHRPLTEEQKTYAAADAHCLLKIFN 205
>gi|294868076|ref|XP_002765369.1| hypothetical protein Pmar_PMAR002368 [Perkinsus marinus ATCC 50983]
gi|239865388|gb|EEQ98086.1| hypothetical protein Pmar_PMAR002368 [Perkinsus marinus ATCC 50983]
Length = 1005
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 22/200 (11%)
Query: 313 VEDIIWVDEVDGLHKAICHIEGCK-VVGIDCEWKPNYV---KGCKMNKVSIMQIASDEMV 368
V D+ + V L + I E + ++G+D EW + GC N+ ++Q+A+ + V
Sbjct: 445 VRDVHLITTVSELKQLISEWEAERTIIGLDSEWSIFRLVLDPGC--NQADLVQLATSDNV 502
Query: 369 FIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHS--YGELECFKHYEM 426
++ D+ E + D + R+++S I+ +G+ D++ L S G
Sbjct: 503 YLVDIYAGEEGLIDEI----GRLVESNNIIVVGFGIAGDLRVLRSSGMEGTRGGVSSPHR 558
Query: 427 LLDIQNV----FKEPKG------GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAA 476
++D+ ++ KG GL+ + + LG L+K R SNW +RPLS Q+EYA+
Sbjct: 559 IVDLNDLVDGYLPSRKGSSKHQRGLTEVVKYFLGKPLSKVMRLSNWRRRPLSYRQVEYAS 618
Query: 477 LDAVVLLQIFHHVRSCSQPT 496
LDA+VLL+ ++S P+
Sbjct: 619 LDAIVLLKCIEKIQSSIDPS 638
>gi|409198156|ref|ZP_11226819.1| 3'-5' exonuclease [Marinilabilia salmonicolor JCM 21150]
Length = 206
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 98/177 (55%), Gaps = 19/177 (10%)
Query: 319 VDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAE 378
+++ D + + + + K +G D E KP++ KG + +S++Q+++ + ++F L
Sbjct: 25 IEDPDHVSEIVERLLKEKAIGFDTETKPSFKKGVSHD-ISLLQLSTKDEAYLFRLPNTG- 82
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPK 438
+ LT+++ +PG++K+G + DI+ L +L F + +++Q + PK
Sbjct: 83 -----FNGSLTKLMNNPGVVKVGVGIRDDIRGLK----QLNNFVP-KGFVELQEM--APK 130
Query: 439 GG-----LSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
G L LA +LG ++K +R SNWE + LS+ Q+ YAA DA V L+I++ ++
Sbjct: 131 YGIEVLSLKNLAGLLLGFRVSKRQRLSNWEAQELSEGQILYAATDAWVSLEIYNKLK 187
>gi|345567854|gb|EGX50756.1| hypothetical protein AOL_s00054g842 [Arthrobotrys oligospora ATCC
24927]
Length = 911
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 90/196 (45%), Gaps = 19/196 (9%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNK------VSIMQIASDEMVF 369
I +V +VD + E K +G D EW PN + +N S++Q+A+ E V
Sbjct: 319 IHYVTDVDEMETVSKLFENDKAIGFDMEWVPNSILKPTVNDRDIRNCASVIQVANQERVA 378
Query: 370 IFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLA-----HSYGELECFKHY 424
IF L K L L +IL+ P ILK+G + + D+ +L+ + G LE +
Sbjct: 379 IFHLAKFPATTKKFLAPTLKKILEDPSILKMGVSIKGDMTRLSTLINVNPAGVLELSHFH 438
Query: 425 EMLLDIQNVFKEP----KGGLSGLAEKILGAGLNKTR-RNSNWEQRPLSQNQLEYAALDA 479
++ + P L+ L ++ L LNK R SNW R L+ +Q YAA DA
Sbjct: 439 SLVFAAEGNVPAPGKSLPASLTNLCKEHLKLPLNKGDVRTSNW-SRELNDDQKFYAANDA 497
Query: 480 VVLLQIFHHV--RSCS 493
+++ + R C+
Sbjct: 498 YASYRVYEAIEERRCA 513
>gi|237721388|ref|ZP_04551869.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229449184|gb|EEO54975.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 219
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 88/174 (50%), Gaps = 13/174 (7%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
KA+ +++ V+GID E +P++ KG + +KV+++QI+S+E F+F L P
Sbjct: 34 EKAVAYLQSRAVIGIDSETRPSFTKG-QSHKVALLQISSEECCFLFRLNMTGLTQP---- 88
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQL--AHSYGELECFKHYEMLLDIQNVFKEPKGGLSG 443
L +L++P ++K+G + + D L + + C + L D F L
Sbjct: 89 --LVDLLENPAVIKVGLSLKDDFMMLHKRAPFTQQSCIE----LQDYVRQFGIQDKSLQK 142
Query: 444 LAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
+ + ++K++R SNWE LS Q +YAA DA L I++ ++ Q D
Sbjct: 143 IYAILFKEKISKSQRLSNWEADVLSDGQKQYAATDAWACLNIYNLLQELKQTGD 196
>gi|409394863|ref|ZP_11246010.1| 3'-5' exonuclease [Pseudomonas sp. Chol1]
gi|409120512|gb|EKM96856.1| 3'-5' exonuclease [Pseudomonas sp. Chol1]
Length = 228
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 83/166 (50%), Gaps = 21/166 (12%)
Query: 329 ICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCL 388
I + C VG D E +P + G ++Q+A+ ++F + VP +++
Sbjct: 40 IGELRACPCVGFDTESRPTFRVGEVSTGPHLIQLATPTQAYLFQVA-----VPGCVEAAR 94
Query: 389 TRILQSPGILKLGYNFQCDIKQLAHSYG-EL-ECFKHYEMLLDIQNV--FKEPKG--GLS 442
T ILQ+P +LK+G+ + D +L G EL C LD+ V +++ KG GL
Sbjct: 95 T-ILQAPDVLKIGFGLKADRSRLRGRLGIELANC-------LDLGTVLRYQDRKGQVGLR 146
Query: 443 GLAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIF 486
G +LGA ++K+RR SNW LS+ Q YAA DA L +F
Sbjct: 147 GAVAGVLGARIHKSRRVTTSNWASAELSEAQQVYAANDAYAALHVF 192
>gi|383114532|ref|ZP_09935294.1| hypothetical protein BSGG_1297 [Bacteroides sp. D2]
gi|313693762|gb|EFS30597.1| hypothetical protein BSGG_1297 [Bacteroides sp. D2]
Length = 219
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 88/174 (50%), Gaps = 13/174 (7%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
KA+ +++ V+GID E +P++ KG + +KV+++QI+S+E F+F L P
Sbjct: 34 EKAVAYLQSRPVIGIDSETRPSFTKG-QSHKVALLQISSEECCFLFRLNMTGLTQP---- 88
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQL--AHSYGELECFKHYEMLLDIQNVFKEPKGGLSG 443
L +L++P ++K+G + + D L + + C + L D F L
Sbjct: 89 --LVDLLENPAVIKVGLSLKDDFMMLHKRAPFTQQSCIE----LQDYVRQFGIQDKSLQK 142
Query: 444 LAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
+ + ++K++R SNWE LS Q +YAA DA L I++ ++ Q D
Sbjct: 143 IYAILFKEKISKSQRLSNWEADVLSDGQKQYAATDAWACLNIYNLLQELKQTGD 196
>gi|115436116|ref|NP_001042816.1| Os01g0300000 [Oryza sativa Japonica Group]
gi|14495214|dbj|BAB60933.1| unknown protein [Oryza sativa Japonica Group]
gi|15623802|dbj|BAB67862.1| unknown protein [Oryza sativa Japonica Group]
gi|113532347|dbj|BAF04730.1| Os01g0300000 [Oryza sativa Japonica Group]
gi|125525536|gb|EAY73650.1| hypothetical protein OsI_01539 [Oryza sativa Indica Group]
gi|125570051|gb|EAZ11566.1| hypothetical protein OsJ_01433 [Oryza sativa Japonica Group]
gi|215686527|dbj|BAG88780.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 201
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 89/186 (47%), Gaps = 16/186 (8%)
Query: 312 VVEDIIWVDE-VDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFI 370
V D+ DE G+ A G +VG+DCEWKPN+V K +KV+++Q+ + E +
Sbjct: 21 VTSDVAAADEWARGVRAAARGGRGL-IVGLDCEWKPNHVS-WKTSKVAVLQLCAGERFCL 78
Query: 371 FDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDI 430
+ A VP + +L P + +G D +L YG + C + L D
Sbjct: 79 VLQLFYANRVP----PAVADLLGDPSVRLVGIGVGEDAAKLEADYG-VWCAAPVD-LEDA 132
Query: 431 QN-----VFKEPKGGLSGLAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLL 483
N V + GL G A ++LG + K RR SNWE+R L Q+EYA +DA V
Sbjct: 133 CNRRLGLVGTGRRLGLKGYAREVLGMAMEKPRRVTMSNWEKRELDPAQVEYACIDAYVSY 192
Query: 484 QIFHHV 489
++ V
Sbjct: 193 KLGERV 198
>gi|160887119|ref|ZP_02068122.1| hypothetical protein BACOVA_05135 [Bacteroides ovatus ATCC 8483]
gi|293370879|ref|ZP_06617424.1| 3'-5' exonuclease [Bacteroides ovatus SD CMC 3f]
gi|299148614|ref|ZP_07041676.1| 3'-5' exonuclease domain protein [Bacteroides sp. 3_1_23]
gi|336414892|ref|ZP_08595235.1| hypothetical protein HMPREF1017_02343 [Bacteroides ovatus
3_8_47FAA]
gi|423288786|ref|ZP_17267637.1| hypothetical protein HMPREF1069_02680 [Bacteroides ovatus
CL02T12C04]
gi|423295051|ref|ZP_17273178.1| hypothetical protein HMPREF1070_01843 [Bacteroides ovatus
CL03T12C18]
gi|156107530|gb|EDO09275.1| 3'-5' exonuclease [Bacteroides ovatus ATCC 8483]
gi|292634095|gb|EFF52639.1| 3'-5' exonuclease [Bacteroides ovatus SD CMC 3f]
gi|298513375|gb|EFI37262.1| 3'-5' exonuclease domain protein [Bacteroides sp. 3_1_23]
gi|335941753|gb|EGN03604.1| hypothetical protein HMPREF1017_02343 [Bacteroides ovatus
3_8_47FAA]
gi|392669984|gb|EIY63470.1| hypothetical protein HMPREF1069_02680 [Bacteroides ovatus
CL02T12C04]
gi|392674074|gb|EIY67524.1| hypothetical protein HMPREF1070_01843 [Bacteroides ovatus
CL03T12C18]
Length = 219
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 88/174 (50%), Gaps = 13/174 (7%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
KA+ +++ V+GID E +P++ KG + +KV+++QI+S+E F+F L P
Sbjct: 34 EKAVAYLQSRPVIGIDSETRPSFTKG-QSHKVALLQISSEECCFLFRLNMTGLTQP---- 88
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQL--AHSYGELECFKHYEMLLDIQNVFKEPKGGLSG 443
L +L++P ++K+G + + D L + + C + L D F L
Sbjct: 89 --LVDLLENPAVIKVGLSLKDDFMMLHKRAPFTQQSCIE----LQDYVRQFGIQDKSLQK 142
Query: 444 LAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
+ + ++K++R SNWE LS Q +YAA DA L I++ ++ Q D
Sbjct: 143 IYAILFKEKISKSQRLSNWEADVLSDGQKQYAATDAWACLNIYNLLQELKQTGD 196
>gi|427383689|ref|ZP_18880409.1| hypothetical protein HMPREF9447_01442 [Bacteroides oleiciplenus YIT
12058]
gi|425728394|gb|EKU91252.1| hypothetical protein HMPREF9447_01442 [Bacteroides oleiciplenus YIT
12058]
Length = 215
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 94/183 (51%), Gaps = 19/183 (10%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
KA+ +++ ++GID E +P++ KG + +KV+++Q++S+E F+F L + +P
Sbjct: 35 KAVTYLKQYPLLGIDSETRPSFTKG-QSHKVALLQVSSEEDCFLFRLNQTGLTLP----- 88
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELE---C--FKHYEMLLDIQNVFKEPKGGL 441
+ +L+SP + K+G + + D L H E C + Y + IQ+ L
Sbjct: 89 -IISLLESPSVTKIGLSLRDDFMML-HKRAPFEQRACIELQEYVRMFGIQD------KSL 140
Query: 442 SGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSEG 501
+ + G ++K++R SNWE L++ Q +YAA DA L I++ ++ D
Sbjct: 141 QKIYGILFGEKISKSQRLSNWEAEHLTEPQKQYAATDAWACLNIYNRLQELKTTGDYELA 200
Query: 502 HDK 504
D+
Sbjct: 201 PDE 203
>gi|413947987|gb|AFW80636.1| hypothetical protein ZEAMMB73_312807 [Zea mays]
Length = 214
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
+VG+DCEWKPNY + +KV+I+Q+ + + + L + D + + + L P
Sbjct: 58 IVGLDCEWKPNY-RSWTTSKVAILQLCAGDRCLVLQLFYV-----DRIPASIRSFLADPD 111
Query: 397 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF----KEPKGGLSGLAEKILGAG 452
+ +G D +LA YG L C E+ + P+ GL G A ++LG
Sbjct: 112 VFFVGIGVGEDAAKLATDYG-LTCASPVELESRCNDYLGYYTGGPRLGLKGYAREVLGLV 170
Query: 453 LNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
+ K R SNWE+ L Q+ YA +DA V ++ V
Sbjct: 171 MEKPRGVTMSNWEKHDLEDAQIRYACIDAYVSYKLGEKV 209
>gi|427783841|gb|JAA57372.1| Putative 3-5 exonuclease [Rhipicephalus pulchellus]
Length = 599
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 87/178 (48%), Gaps = 13/178 (7%)
Query: 320 DEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAED 379
+ V+ L +C G ++G+DCEW P Y K + NK++++Q+A + + L++L +
Sbjct: 53 ERVEALFLELCRQSG--ILGLDCEWVP-YGKKERNNKIALLQLAPTKDFSV--LLRLCKM 107
Query: 380 VPD----VLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYG--ELECFKHYEMLLDIQNV 433
+P+ VL L +L I+KLG D +L YG C +L +
Sbjct: 108 LPNEDASVLPESLRAVLDDESIVKLGVAVCNDASKLRRDYGLSVRGCLDLRYVLTYFPEL 167
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
P GL A ILG + T SNWE LS+ Q++YAA D ++ +QIF +
Sbjct: 168 RHYPAAGLKKQALAILGTHMGDTTELTCSNWEADTLSEAQVDYAATDVLLPVQIFEQI 225
>gi|427797585|gb|JAA64244.1| Putative 3-5 exonuclease, partial [Rhipicephalus pulchellus]
Length = 614
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 87/178 (48%), Gaps = 13/178 (7%)
Query: 320 DEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAED 379
+ V+ L +C G ++G+DCEW P Y K + NK++++Q+A + + L++L +
Sbjct: 68 ERVEALFLELCRQSG--ILGLDCEWVP-YGKKERNNKIALLQLAPTKDFSV--LLRLCKM 122
Query: 380 VPD----VLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYG--ELECFKHYEMLLDIQNV 433
+P+ VL L +L I+KLG D +L YG C +L +
Sbjct: 123 LPNEDASVLPESLRAVLDDESIVKLGVAVCNDASKLRRDYGLSVRGCLDLRYVLTYFPEL 182
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
P GL A ILG + T SNWE LS+ Q++YAA D ++ +QIF +
Sbjct: 183 RHYPAAGLKKQALAILGTHMGDTTELTCSNWEADTLSEAQVDYAATDVLLPVQIFEQI 240
>gi|170051623|ref|XP_001861848.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167872804|gb|EDS36187.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 925
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 90/186 (48%), Gaps = 23/186 (12%)
Query: 319 VDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAE 378
VD + + +V D EWKP + N+V+++Q+A+ + V++ D++
Sbjct: 436 VDSREKFFAMTSDLSQQSLVAFDSEWKPTFGGA---NEVAVIQLATRDDVYLVDVLVSQL 492
Query: 379 DVPDVLDSCLTRILQSPGILKLGYN-------FQCDIKQLAHSYG--------ELEC-FK 422
D S L + +LKL + FQ + SYG +L+ ++
Sbjct: 493 QGSDW--SELASVFNRDDVLKLAFAPSTDFNMFQKALPAFNVSYGPQSGSTILDLQVLWR 550
Query: 423 HYEMLLDIQNVFKE--PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAV 480
+ + Q FKE LS L++ LG L+K+ + SNW QRPL + Q++YAALDA
Sbjct: 551 KVDAIKSFQFPFKEEITNQNLSNLSKLCLGKKLDKSNQFSNWAQRPLRREQIQYAALDAY 610
Query: 481 VLLQIF 486
VLLQI+
Sbjct: 611 VLLQIY 616
>gi|327281940|ref|XP_003225703.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Anolis carolinensis]
Length = 619
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 86/176 (48%), Gaps = 10/176 (5%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIA-SDEMVFIFDLIKLAEDVPDVLDSCLTR 390
+E C V+GIDCEW G K VS++Q+A + + + L L D VL L
Sbjct: 98 LEYCPVLGIDCEWVS--ADGKKAKPVSLLQLAVASGLCILLRLTHLTID-GQVLPKTLLH 154
Query: 391 ILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLS--GLAEKI 448
IL S ILK+G D +L YG + L ++ P+ GLS LAEKI
Sbjct: 155 ILGSGSILKVGVGCWEDAYKLLRDYGVIVKGTVDLRYLAMRQRKALPQNGLSLKSLAEKI 214
Query: 449 LGAGLNKT--RRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS--CSQPTDVSE 500
L L+K+ R SNWE L++ Q+ YAA DA V + +F H+ C P SE
Sbjct: 215 LNYSLDKSFHLRCSNWEVEELAEEQITYAARDAQVSVALFLHLLGLPCISPAADSE 270
>gi|255089332|ref|XP_002506588.1| predicted protein [Micromonas sp. RCC299]
gi|226521860|gb|ACO67846.1| predicted protein [Micromonas sp. RCC299]
Length = 1038
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 55/202 (27%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAED----------------V 380
VVG+D EW+P+ K + V+++Q+A+ F+ D+ L
Sbjct: 591 VVGLDAEWRPH-----KHSPVALLQVATRREAFLVDVASLMRRDEGGDRYDRYDDRYDAN 645
Query: 381 PDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY-GELECFKHYE-------------- 425
+ D+ L +L +P +++LG+ F+ D+ +L Y G L +
Sbjct: 646 AEAFDAFLRDLLDAPDVVRLGFGFEYDLSRLRRGYAGRLSSLERRRENANDEDTDERRVN 705
Query: 426 -----------MLLDIQNVF--------KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRP 466
++D++ + K + GL+ L +LGA ++KT + S+WE+RP
Sbjct: 706 EFGETGHALGTRIVDVKALALCAFPDKQKLTRVGLATLVASVLGAYVDKTEQCSDWERRP 765
Query: 467 LSQNQLEYAALDAVVLLQIFHH 488
L+ +Q++YAA DA VL +F
Sbjct: 766 LTTDQVDYAAADAHVLTVLFDR 787
>gi|402846843|ref|ZP_10895152.1| 3'-5' exonuclease [Porphyromonas sp. oral taxon 279 str. F0450]
gi|402267535|gb|EJU16930.1| 3'-5' exonuclease [Porphyromonas sp. oral taxon 279 str. F0450]
Length = 186
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 89/174 (51%), Gaps = 15/174 (8%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
+ + ++GID E +P++ G + +VS++QIA++E F+F L K+ L
Sbjct: 18 RRVAMRLRRAGILGIDTETRPSFTAGVRY-EVSLLQIATEEECFLFRLNKMG------LP 70
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV---FKEPKGGLS 442
L +L+ P I+K+G + + DI L+ E F +++Q + + + GL
Sbjct: 71 KSLISLLEDPAIIKVGLSLRDDITALSRR----EAFTPGS-FVELQKLCGGYGIRELGLQ 125
Query: 443 GLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPT 496
+ + ++K++R S+WE + LS Q YAALDA L+I+ + + P+
Sbjct: 126 KIYAILFAERMSKSQRMSDWEAKKLSPAQAHYAALDAWASLRIYTTLMALPAPS 179
>gi|393781320|ref|ZP_10369520.1| hypothetical protein HMPREF1071_00388 [Bacteroides salyersiae
CL02T12C01]
gi|392676904|gb|EIY70325.1| hypothetical protein HMPREF1071_00388 [Bacteroides salyersiae
CL02T12C01]
Length = 213
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 92/168 (54%), Gaps = 17/168 (10%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
KA+ +++ +++GID E +P++ KG + +KV+++QI+SDE F+F L L
Sbjct: 35 KAVAYLQAQQILGIDSETRPSFTKG-QSHKVALLQISSDECCFLFRLNMTG------LTQ 87
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAE 446
L +L++P I+K+G + + D L H + + +++Q+ F P G +
Sbjct: 88 SLIGLLENPEIIKVGLSLRDDFMML-HKRAPF----NQQGCIELQD-FVRPFGIQDKSLQ 141
Query: 447 KILG----AGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
KI G ++K++R SNWE L+ Q +YAA DA L I++ ++
Sbjct: 142 KIYGILFKEKISKSQRLSNWEADVLTDAQKQYAATDAWACLNIYNRLQ 189
>gi|388513329|gb|AFK44726.1| unknown [Lotus japonicus]
Length = 206
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 77/154 (50%), Gaps = 12/154 (7%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
+VG+D EW+PN + K N V+++Q+ D +F +I A +PD L S L +P
Sbjct: 51 IVGLDIEWRPN-TQAFKNNPVALLQLCVDHRCLVFQIIH-APSIPDSLSS----FLSNPQ 104
Query: 397 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEP---KGGLSGLAEKILGAGL 453
+G Q D+ +L ++ V+ +P K GL L +++LG +
Sbjct: 105 HTFVGVGIQGDVDKLLKDRS-FTVANAVDLRTLAAEVYGDPEMMKAGLKALTQRVLGMNV 163
Query: 454 NKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQI 485
K ++ S W+ R LS Q++YAA+DA V +I
Sbjct: 164 EKPKKISTSKWDDRYLSVEQVQYAAIDAFVSFEI 197
>gi|423347256|ref|ZP_17324943.1| hypothetical protein HMPREF1060_02615 [Parabacteroides merdae
CL03T12C32]
gi|409218513|gb|EKN11484.1| hypothetical protein HMPREF1060_02615 [Parabacteroides merdae
CL03T12C32]
Length = 193
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 19/180 (10%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
II +D + + KA+ ++ + VG D E +P++ KG + K+S+MQI++DE F+F L +
Sbjct: 26 IIVIDTLRDVEKAVGYLSEFQSVGFDTETRPSFKKGQRY-KISLMQISTDEACFLFRLNR 84
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYE--MLLDIQNV 433
+ +P+ L+ L + + K+G + + D +G + + LD+QN
Sbjct: 85 IG--IPEALEEFLA----NEKVQKIGLSLRDD-------FGAMRKRTDIQPANFLDLQNY 131
Query: 434 ---FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
F L + + ++K +R SNWE LS Q +YAALDA L+I++ ++
Sbjct: 132 VGQFGIEDASLQKIYAILFNKKISKGQRLSNWEADILSDAQKKYAALDAWACLKIYNQLK 191
>gi|443895572|dbj|GAC72918.1| predicted 3'-5' exonuclease [Pseudozyma antarctica T-34]
Length = 624
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 22/182 (12%)
Query: 334 GCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQ 393
G +G+D EW N+ + N+ +++Q+ S M+ + + ++ VP +L + ILQ
Sbjct: 186 GPGPMGLDLEW--NFTRFGGANRTALLQLCSSRMILVIHMSAMSHRVPPLLRT----ILQ 239
Query: 394 SPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK--EPKG--------GLSG 443
P I+K G + D +L Y H +L++ N+ K +P L
Sbjct: 240 DPSIIKTGVAIRNDALKLQRDYA-----IHMRNVLELSNLAKLAQPARWASVGTLISLRD 294
Query: 444 LAEKILGAGLNKTR-RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSEGH 502
L LG L K R S+WE PL Q Q+EYAA D L++ + PT +
Sbjct: 295 LTRIYLGRRLRKGDVRVSDWETFPLDQEQIEYAASDTFASLEVLRAIAEYFTPTPPDKER 354
Query: 503 DK 504
D+
Sbjct: 355 DR 356
>gi|423212341|ref|ZP_17198870.1| hypothetical protein HMPREF1074_00402 [Bacteroides xylanisolvens
CL03T12C04]
gi|392694787|gb|EIY88013.1| hypothetical protein HMPREF1074_00402 [Bacteroides xylanisolvens
CL03T12C04]
Length = 222
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 88/174 (50%), Gaps = 13/174 (7%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
+A+ +++ V+GID E +P++ KG + +KV+++QI+S+E F+F L P
Sbjct: 34 ERAVAYLQSRSVIGIDSETRPSFTKG-QSHKVALLQISSEECCFLFRLNMTGLTQP---- 88
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQL--AHSYGELECFKHYEMLLDIQNVFKEPKGGLSG 443
L +L++P ++K+G + + D L + + C + L D F L
Sbjct: 89 --LVDLLENPAVIKVGLSLKDDFMMLHKRAPFTQQSCIE----LQDYVRQFGIQDKSLQK 142
Query: 444 LAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
+ + ++K++R SNWE LS Q +YAA DA L I++ ++ Q D
Sbjct: 143 IYAILFKEKISKSQRLSNWEADVLSDGQKQYAATDAWACLNIYNLLQELKQTGD 196
>gi|195352042|ref|XP_002042524.1| GM23271 [Drosophila sechellia]
gi|194124393|gb|EDW46436.1| GM23271 [Drosophila sechellia]
Length = 625
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 26/198 (13%)
Query: 310 ELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVF 369
+L E +I VD+ D + + H++ V+ +D EW + C N++ ++QIA+D V+
Sbjct: 404 DLPDECLIIVDKADQFDRMLYHLQQECVIYLDSEWMQSV---CGDNQLCVLQIATDHNVY 460
Query: 370 IFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYG---ELECFKHYEM 426
+ D + + I + I K+G++ D+ L S L+ HY
Sbjct: 461 LIDCLARESLRSEHWRLLGANIFNNVNIRKVGFSMVSDLSVLQRSLPLQLRLQMPHHY-- 518
Query: 427 LLDIQNVFKEPK-----------------GGLSGLAEKILGAGLNKTRRNSNWEQRPLSQ 469
LD++N++ E K L+ L+ LG LNK+ + SNW RPL +
Sbjct: 519 -LDLRNLWLELKKQRFGVELPFGNVNRAGDALTDLSLACLGKKLNKSNQCSNWANRPLRR 577
Query: 470 NQLEYAALDAVVLLQIFH 487
Q+ YAA+DA LL I++
Sbjct: 578 EQILYAAIDARCLLLIYN 595
>gi|34394896|dbj|BAC84412.1| unknown protein [Oryza sativa Japonica Group]
Length = 501
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 57/218 (26%)
Query: 337 VVGIDCEWKPN----------------YVKGCKMNKVSIMQIASDEM----------VFI 370
VV +D EWKP + V+++Q+A VF+
Sbjct: 40 VVALDAEWKPRRRGPAVADDPSAAAAATPPPLQFPTVTLLQVACRGDGDGGGAAAAEVFV 99
Query: 371 FDL--IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY----GELECFKHY 424
DL + LAE L L + + P +LKLG+ F+ D+ L+ ++ G F+
Sbjct: 100 VDLLAVPLAE-----LREPLRELFERPEVLKLGFRFKQDLVYLSATFAAALGSSAGFERV 154
Query: 425 EMLLDIQNVFKEPKG------------GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQL 472
E LD+ N + KG L+ + E++LG L+K + S+W RPLS+ Q+
Sbjct: 155 EPFLDVTNAYYYLKGHDMQKRLPRETKSLATICEELLGVYLSKELQCSDWSYRPLSEGQI 214
Query: 473 EYAALDAVVLLQIF----HHVRSCSQ--PTD--VSEGH 502
+YAA DA LL IF +R+ + PT+ S+GH
Sbjct: 215 QYAASDAYYLLDIFDLFHQKIRTEGKCLPTNELTSDGH 252
>gi|262408617|ref|ZP_06085163.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294646256|ref|ZP_06723909.1| 3'-5' exonuclease [Bacteroides ovatus SD CC 2a]
gi|294805802|ref|ZP_06764678.1| 3'-5' exonuclease [Bacteroides xylanisolvens SD CC 1b]
gi|336406968|ref|ZP_08587610.1| hypothetical protein HMPREF0127_04923 [Bacteroides sp. 1_1_30]
gi|345511326|ref|ZP_08790870.1| hypothetical protein BSAG_01819 [Bacteroides sp. D1]
gi|229444317|gb|EEO50108.1| hypothetical protein BSAG_01819 [Bacteroides sp. D1]
gi|262353482|gb|EEZ02576.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638389|gb|EFF56754.1| 3'-5' exonuclease [Bacteroides ovatus SD CC 2a]
gi|294446978|gb|EFG15569.1| 3'-5' exonuclease [Bacteroides xylanisolvens SD CC 1b]
gi|335948443|gb|EGN10151.1| hypothetical protein HMPREF0127_04923 [Bacteroides sp. 1_1_30]
Length = 222
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 88/174 (50%), Gaps = 13/174 (7%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
+A+ +++ V+GID E +P++ KG + +KV+++QI+S+E F+F L P
Sbjct: 34 ERAVAYLQSRSVIGIDSETRPSFTKG-QSHKVALLQISSEECCFLFRLNMTGLTQP---- 88
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQL--AHSYGELECFKHYEMLLDIQNVFKEPKGGLSG 443
L +L++P ++K+G + + D L + + C + L D F L
Sbjct: 89 --LVDLLENPAVIKVGLSLKDDFMMLHKRAPFTQQSCIE----LQDYVRQFGIQDKSLQK 142
Query: 444 LAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
+ + ++K++R SNWE LS Q +YAA DA L I++ ++ Q D
Sbjct: 143 IYAILFKEKISKSQRLSNWEADVLSDGQKQYAATDAWACLNIYNLLQELKQTGD 196
>gi|115471903|ref|NP_001059550.1| Os07g0452400 [Oryza sativa Japonica Group]
gi|113611086|dbj|BAF21464.1| Os07g0452400 [Oryza sativa Japonica Group]
Length = 501
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 87/194 (44%), Gaps = 49/194 (25%)
Query: 337 VVGIDCEWKPN----------------YVKGCKMNKVSIMQIASDEM----------VFI 370
VV +D EWKP + V+++Q+A VF+
Sbjct: 40 VVALDAEWKPRRRGPAVADDPSAAAAATPPPLQFPTVTLLQVACRGDGDGGGAAAAEVFV 99
Query: 371 FDL--IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY----GELECFKHY 424
DL + LAE L L + + P +LKLG+ F+ D+ L+ ++ G F+
Sbjct: 100 VDLLAVPLAE-----LREPLRELFERPEVLKLGFRFKQDLVYLSATFAAALGSSAGFERV 154
Query: 425 EMLLDIQNVFKEPKG------------GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQL 472
E LD+ N + KG L+ + E++LG L+K + S+W RPLS+ Q+
Sbjct: 155 EPFLDVTNAYYYLKGHDMQKRLPRETKSLATICEELLGVYLSKELQCSDWSYRPLSEGQI 214
Query: 473 EYAALDAVVLLQIF 486
+YAA DA LL IF
Sbjct: 215 QYAASDAYYLLDIF 228
>gi|384489817|gb|EIE81039.1| hypothetical protein RO3G_05744 [Rhizopus delemar RA 99-880]
Length = 326
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 24/210 (11%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
V G+D EW P ++KG + K+S++QI + + + +F + ++ + L L ++
Sbjct: 114 VFGVDFEWPPTFIKGQREKKISLIQICAAKTILLFQVGRMKK-----LPQELQNFFENKE 168
Query: 397 ILKLGYNFQCDIKQLAHSYG-------ELECFKHYEMLLDIQNVFKEPKGGLSGLAEKIL 449
+LK G N + D ++L +G EL + DI L L L
Sbjct: 169 LLKTGVNIKMDGQKLYRDFGIKTNGLVELMTLANLSKSSDITRTHHR---SLRALTAIFL 225
Query: 450 GAGLNKTR-RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSEGHDKIEWK 508
+ K + R SNW LS NQ +YAALDA QI+ ++ EG + + +
Sbjct: 226 KQKMAKGKVRMSNWSAPVLSPNQKKYAALDAYASYQIYQTIK--------KEGIENVPIE 277
Query: 509 SYIVSHMDNPKKSKKRPTIKKETESGANYH 538
+ ++ PK KK T K E + H
Sbjct: 278 HLLHQNLSTPKVEKKPKTQMKTAEKKSTSH 307
>gi|298481453|ref|ZP_06999645.1| 3'-5' exonuclease domain protein [Bacteroides sp. D22]
gi|295086916|emb|CBK68439.1| Ribonuclease D [Bacteroides xylanisolvens XB1A]
gi|298272317|gb|EFI13886.1| 3'-5' exonuclease domain protein [Bacteroides sp. D22]
Length = 222
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 88/174 (50%), Gaps = 13/174 (7%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
+A+ +++ V+GID E +P++ KG + +KV+++QI+S+E F+F L P
Sbjct: 34 ERAVAYLQSRSVIGIDSETRPSFTKG-QSHKVALLQISSEECCFLFRLNMTGLTQP---- 88
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQL--AHSYGELECFKHYEMLLDIQNVFKEPKGGLSG 443
L +L++P ++K+G + + D L + + C + L D F L
Sbjct: 89 --LVDLLENPAVIKVGLSLKDDFMMLHKRAPFTQQSCIE----LQDYVRQFGIQDKSLQK 142
Query: 444 LAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
+ + ++K++R SNWE LS Q +YAA DA L I++ ++ Q D
Sbjct: 143 IYAILFKEKISKSQRLSNWEADVLSDGQKQYAATDAWACLNIYNLLQELKQTGD 196
>gi|402220892|gb|EJU00962.1| ribonuclease H-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 338
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 20/160 (12%)
Query: 338 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGI 397
+G D EW+PNYVKG + N S++Q+ + + + + + L +L +P I
Sbjct: 88 LGFDTEWRPNYVKGGRENWTSLIQLGDEHNILLIQISAM-----QYFPESLRELLSNPAI 142
Query: 398 LKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK--EP-------KGGLSGLAEKI 448
+K+G + D +L H +LE + LLD+ + K +P GL+ L E
Sbjct: 143 VKVGVGIRGDAFKL-HREQQLE----FSSLLDLADFAKLVDPDKWAPNRNPGLAALCETY 197
Query: 449 LGAGLNKTR-RNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
L L K + SNWE P+++ +YAA DA V +IF
Sbjct: 198 LERTLKKGKITKSNWEMNPMTKAMQDYAANDAHVSFKIFR 237
>gi|17554336|ref|NP_499105.1| Protein MUT-7 [Caenorhabditis elegans]
gi|466063|sp|P34607.1|MUT7_CAEEL RecName: Full=Probable exonuclease mut-7; AltName: Full=Exonuclease
3'-5' domain-containing protein 3 homolog
gi|3881488|emb|CAA80137.1| Protein MUT-7 [Caenorhabditis elegans]
Length = 910
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 21/209 (10%)
Query: 338 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKL--AEDVPDVLDSCLTRILQSP 395
VG D EWKP+ + +K++I+Q+ V++ D ++L A D +R+
Sbjct: 432 VGFDSEWKPSNLTAVHDSKIAIIQLFFKNCVWLVDCVELEKANMADDWWQKFASRLFGDS 491
Query: 396 GILKLGYNFQCDIKQLA-----HSYGELECFKHY-------EMLLDIQ-NVFKEPKGG-- 440
+ +G++ + D+ +A S ++E K+ E + DI + + PK
Sbjct: 492 PVKVVGFDMRNDLDAMATIPALKSSMKIEDTKNAFDLKRLAENVCDIDMEILELPKKTFK 551
Query: 441 LSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSE 500
L+ L +LG L+KT + SNW+ RPL + Q+ YAALDAVV+++ F + S + +
Sbjct: 552 LADLTHYLLGLELDKTEQCSNWQCRPLRKKQIVYAALDAVVVVETFKKILSIVEEKNKDA 611
Query: 501 GHDKIEWKSYIVSHMDNPKKSKKRPTIKK 529
+KI +S +++ PKK K + +K
Sbjct: 612 DIEKIVRESNVMA----PKKDKGHKSYRK 636
>gi|125558189|gb|EAZ03725.1| hypothetical protein OsI_25856 [Oryza sativa Indica Group]
Length = 501
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 87/194 (44%), Gaps = 49/194 (25%)
Query: 337 VVGIDCEWKPN----------------YVKGCKMNKVSIMQIASDEM----------VFI 370
VV +D EWKP + V+++Q+A VF+
Sbjct: 40 VVALDAEWKPRRRGPAVADDPSAAAAATPPPPQFPTVTLLQVACRGDGDGGGAAAAEVFV 99
Query: 371 FDL--IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY----GELECFKHY 424
DL + LAE L L + + P +LKLG+ F+ D+ L+ ++ G F+
Sbjct: 100 VDLLAVPLAE-----LREPLRELFERPEVLKLGFRFKQDLVYLSATFAAALGSSAGFERV 154
Query: 425 EMLLDIQNVFKEPKG------------GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQL 472
E LD+ N + KG L+ + E++LG L+K + S+W RPLS+ Q+
Sbjct: 155 EPFLDVTNAYYYLKGHDMQKRLPRETKSLATICEELLGVYLSKELQCSDWSYRPLSEGQI 214
Query: 473 EYAALDAVVLLQIF 486
+YAA DA LL IF
Sbjct: 215 QYAASDAYYLLDIF 228
>gi|410100003|ref|ZP_11294968.1| hypothetical protein HMPREF1076_04146 [Parabacteroides goldsteinii
CL02T12C30]
gi|409216558|gb|EKN09542.1| hypothetical protein HMPREF1076_04146 [Parabacteroides goldsteinii
CL02T12C30]
Length = 194
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 23/181 (12%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
I+ +D KA+ ++ + VG D E +P++ KG + K+S+MQI++DE F+F L +
Sbjct: 26 ILVIDTEKDADKAVSYLTQFEAVGFDTETRPSFKKGTRY-KISLMQISTDEACFLFRLNR 84
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEM----LLDIQ 431
+ +P L+ L + ILK+G + + D +G + K ++ LD+Q
Sbjct: 85 IG--IPQSLEDFLV----NDKILKIGLSLRDD-------FGAMR--KRTDIKPANFLDLQ 129
Query: 432 NV---FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHH 488
N F L + + ++K +R SNWE L++ Q +YAALDA L+I++
Sbjct: 130 NYVGQFGIEDASLQKIYAILFDKKISKGQRLSNWEADVLTEQQKKYAALDAWACLKIYNQ 189
Query: 489 V 489
+
Sbjct: 190 L 190
>gi|255693419|ref|ZP_05417094.1| 3'-5' exonuclease domain protein [Bacteroides finegoldii DSM 17565]
gi|423302015|ref|ZP_17280038.1| hypothetical protein HMPREF1057_03179 [Bacteroides finegoldii
CL09T03C10]
gi|260620806|gb|EEX43677.1| 3'-5' exonuclease [Bacteroides finegoldii DSM 17565]
gi|408471106|gb|EKJ89638.1| hypothetical protein HMPREF1057_03179 [Bacteroides finegoldii
CL09T03C10]
Length = 214
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 87/171 (50%), Gaps = 13/171 (7%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
KA+ +++ V+GID E +P++ KG + +KV+++QI+S+E F+F L P
Sbjct: 34 EKAVAYLQSRSVIGIDSETRPSFTKG-QSHKVALLQISSEECCFLFRLNMTGLTRP---- 88
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQL--AHSYGELECFKHYEMLLDIQNVFKEPKGGLSG 443
L +L++P ++K+G + + D L + + C + L D F L
Sbjct: 89 --LVDLLENPDVIKVGLSLKDDFMMLHKRAPFNQQNCIE----LQDYVRQFGIQDKSLQK 142
Query: 444 LAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQ 494
+ + ++K++R SNWE LS Q +YAA DA L I++ ++ Q
Sbjct: 143 IYAILFKEKISKSQRLSNWEADVLSDGQKQYAATDAWACLNIYNLLQELKQ 193
>gi|156089519|ref|XP_001612166.1| 3'-5' exonuclease domain containing protein [Babesia bovis]
gi|154799420|gb|EDO08598.1| 3'-5' exonuclease domain containing protein [Babesia bovis]
Length = 230
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 20/181 (11%)
Query: 316 IIWVDEVDGLH--KAICHIEGCKVVGIDCEWKPNYV-----KGCKMNKVSIMQIASDEMV 368
I+ +D + H + + K VG D E+ P+Y + + +++QIAS+++
Sbjct: 35 IVLIDSENAEHYQDSAAALLSTKCVGFDLEYVPDYYASIHRQSFDRTRPAVIQIASNDIC 94
Query: 369 FIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLL 428
++ + K+ L S ++ IL P ILK+ + D++ + +G +
Sbjct: 95 LVYLMYKIGH-----LPSSVSHILSDPDILKISHGAPSDMRLMYRHFG-----VRSRSFV 144
Query: 429 DIQNVFKEPK---GGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
D+Q+V +E + L + +++LG L+K ++ SNWE LSQ Q++YAA DA V L
Sbjct: 145 DLQSVCEELQLRPCSLKSVVQRVLGLRLSKKQQCSNWEAAELSQQQIKYAATDAWVTLAA 204
Query: 486 F 486
F
Sbjct: 205 F 205
>gi|325282020|ref|YP_004254562.1| 3'-5' exonuclease [Odoribacter splanchnicus DSM 20712]
gi|324313829|gb|ADY34382.1| 3'-5' exonuclease [Odoribacter splanchnicus DSM 20712]
Length = 203
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 85/164 (51%), Gaps = 23/164 (14%)
Query: 338 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGI 397
+G D E +P++ KG ++ KVS++Q+A E VF+F L K L R+L SP I
Sbjct: 48 LGFDTETRPSFRKG-EIYKVSLLQLAVPERVFLFRLNKCG------FQPALVRLLASPRI 100
Query: 398 LKLGYNFQCD---IKQLAH----SYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILG 450
+K+G + D +++LA S+ +L+ + Y + D S L I G
Sbjct: 101 IKIGVGIRDDNRNLRKLADFTPASFVDLQEYAGYFGIED---------KSFSKLMAIIFG 151
Query: 451 AGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQ 494
++K +R SNWE L++ Q+ YAA DA L+++ + + ++
Sbjct: 152 VKISKRQRTSNWEAPALTEAQIRYAATDAWGALKMYQRLAAFAE 195
>gi|116793719|gb|ABK26855.1| unknown [Picea sitchensis]
Length = 204
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 12/157 (7%)
Query: 334 GCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQ 393
G ++VG D EW+P++ +G + N +++Q+ +D I ++ L D + L L+
Sbjct: 46 GQEIVGFDMEWRPSFQRGWE-NDTALLQLCTDNGCLIIQMLFL-----DFIPEALVSFLK 99
Query: 394 SPGILKLGYNFQCDIKQLAHSYGELECFKHYEM-LLDIQNVFKE--PKGGLSGLAEKILG 450
PG+ +G + D +L + +G LEC E+ L + + + + GL GLA+++LG
Sbjct: 100 DPGVKLVGVGIERDAAKLMNDHG-LECGGQVELGALAAEKLERRELKQAGLKGLAKEVLG 158
Query: 451 AGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQI 485
L+K + SNW L Q++YA +DA V L I
Sbjct: 159 LRLSKPKSISMSNWAWAILQHRQIQYACIDAFVSLAI 195
>gi|392597116|gb|EIW86438.1| ribonuclease H-like protein [Coniophora puteana RWD-64-598 SS2]
Length = 366
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 86/173 (49%), Gaps = 22/173 (12%)
Query: 338 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGI 397
+G D EWKPNY KG N V+I+Q+A+D ++ + + + E + L +L+SP
Sbjct: 54 LGFDLEWKPNYRKGEAENPVAIVQLANDNLILLLQVSAMTE-----FPASLRVLLESPDF 108
Query: 398 LKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEP-KG------GLSGLAEKILG 450
LK G Q D ++L Y ++ C E+ ++ + KG GL+ L E
Sbjct: 109 LKAGVGIQHDCQKLYRDY-QVSCRNCVELAFLARSADNDQWKGKYSSPIGLARLLEAYEN 167
Query: 451 AGLNKTR-RNSNWEQRPLSQNQLEYAALDAVV-------LLQIFHHVRSCSQP 495
L K + + SNWE R L+ NQ +YAA DA V L+Q+ H + + P
Sbjct: 168 YTLAKGKVQRSNWE-RHLTDNQQDYAANDAYVGSRLYSRLIQMAHEMPTLPLP 219
>gi|224023974|ref|ZP_03642340.1| hypothetical protein BACCOPRO_00691 [Bacteroides coprophilus DSM
18228]
gi|224017196|gb|EEF75208.1| hypothetical protein BACCOPRO_00691 [Bacteroides coprophilus DSM
18228]
Length = 204
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 89/172 (51%), Gaps = 8/172 (4%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
KA+ ++ +VG+D E +P++ KG +N+V+++Q+A+ + F+F L + +PD L+
Sbjct: 35 RKAVAYLNSHALVGVDTETRPSFRKGM-VNQVALLQVATADACFLFRLNHIG--LPDFLE 91
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLA 445
L +LK+G + + D + L+ + ++ L D F + L +
Sbjct: 92 EFLQN-----DVLKVGLSLKDDFRMLSRRNRQDPRTGNWVELQDYVPHFGIEEMSLQKIY 146
Query: 446 EKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
+ G ++KT+R SNWE L++ Q YAA DA ++I+ ++ + D
Sbjct: 147 ALLFGEKISKTQRLSNWEAETLTEAQQLYAATDAWACVRIYEYLEELRRTGD 198
>gi|145476719|ref|XP_001424382.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391446|emb|CAK56984.1| unnamed protein product [Paramecium tetraurelia]
Length = 510
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 96/181 (53%), Gaps = 17/181 (9%)
Query: 316 IIWVDEVD-GLHKAICHIEGCKVVGIDCE----WKPNYVKGCKMNKVSIMQIASDEMVFI 370
II++D++D A I VG DCE W + G K V +QIA+ F+
Sbjct: 316 IIFIDKIDENYFDAWKCIHSSNAVGYDCEHVTPWTKLDLDGFK---VCFVQIATSSHAFL 372
Query: 371 FDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDI 430
FD KL + + + + ++L++ GILK+G + + D+K +Y +L+ K ++++
Sbjct: 373 FDYQKLKD--SEEFKNDVRQLLENVGILKIGLSLKDDLKHTV-NYLKLKNIK-IGSIVEL 428
Query: 431 QNVFKEPKG-----GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
Q+ FK +G L+ ++E L+K SNWE RPL + Q YAALDA++ LQI
Sbjct: 429 QSCFKVLEGDQKLRSLAYISEFYFKKKLSKFDTCSNWEYRPLRKAQAHYAALDAIISLQI 488
Query: 486 F 486
+
Sbjct: 489 Y 489
>gi|29349740|ref|NP_813243.1| hypothetical protein BT_4332 [Bacteroides thetaiotaomicron
VPI-5482]
gi|298384013|ref|ZP_06993574.1| 3'-5' exonuclease domain protein [Bacteroides sp. 1_1_14]
gi|383120679|ref|ZP_09941404.1| hypothetical protein BSIG_2318 [Bacteroides sp. 1_1_6]
gi|29341650|gb|AAO79437.1| 3'-5' exonuclease-like protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|251840275|gb|EES68357.1| hypothetical protein BSIG_2318 [Bacteroides sp. 1_1_6]
gi|298263617|gb|EFI06480.1| 3'-5' exonuclease domain protein [Bacteroides sp. 1_1_14]
Length = 216
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 84/164 (51%), Gaps = 13/164 (7%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
KA+ +++ ++GID E +P++ KG + +KV+++QI+SDE F+F L P
Sbjct: 34 EKAVAYLQSQPILGIDSETRPSFTKG-QSHKVALLQISSDECCFLFRLNMTGLTQP---- 88
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQL--AHSYGELECFKHYEMLLDIQNVFKEPKGGLSG 443
L +L++P ++K+G + + D L + + C + L D F L
Sbjct: 89 --LVDLLENPAVIKVGLSLKDDFMMLHKRAPFTQQSCIE----LQDYVRQFGIQDKSLQK 142
Query: 444 LAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
+ + ++K++R SNWE LS Q +YAA DA L I++
Sbjct: 143 IYAILFKEKISKSQRLSNWEADVLSDGQKQYAATDAWACLNIYN 186
>gi|333029171|ref|ZP_08457232.1| 3'-5' exonuclease [Bacteroides coprosuis DSM 18011]
gi|332739768|gb|EGJ70250.1| 3'-5' exonuclease [Bacteroides coprosuis DSM 18011]
Length = 211
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 15/175 (8%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
KAI + ++GID E +P +VKG K KV+++QI++D + F+F L KL VP++++
Sbjct: 34 RKAIEILNAQTILGIDSETRPAFVKG-KSYKVALLQISTDNICFLFRLNKLGL-VPELIE 91
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE---PKGGLS 442
+L++P I K+G + + D L FK E +D+Q K L
Sbjct: 92 -----LLENPNIKKIGLSLRDDFMMLRKRAS----FKQ-ENCIDLQEYVKHFGIKDKSLQ 141
Query: 443 GLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
+ + ++K +R SNWE L+ Q YAA DA L+I++ + Q D
Sbjct: 142 KIYAILFKEKISKAQRLSNWEAVELTDAQQRYAATDAWSCLRIYNFLEELKQSGD 196
>gi|303235739|ref|ZP_07322346.1| 3'-5' exonuclease [Prevotella disiens FB035-09AN]
gi|302484186|gb|EFL47174.1| 3'-5' exonuclease [Prevotella disiens FB035-09AN]
Length = 230
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 89/170 (52%), Gaps = 19/170 (11%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
KA+ ++ ++GID E +P + KG K +KV+++Q+++ ++ F+F L + + S
Sbjct: 44 KAVDYLLSADILGIDSETRPVFCKG-KHHKVALLQVSTHDVCFLFRLNLIG------MPS 96
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAE 446
C+ R+L+ + K+G + D L H + K +D+QN+ +E G+ L+
Sbjct: 97 CIIRLLEDTTVTKVGLSLHDDFMML-HKRTDFTTGK----FIDLQNIVQE--FGIEDLSL 149
Query: 447 KILGAGL-----NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
+ L A L K + SNWE LS Q YAA DA +QI+ +R+
Sbjct: 150 QKLYANLFHERITKREQLSNWEAPILSDKQKLYAATDAWACIQIYERLRA 199
>gi|389751885|gb|EIM92958.1| ribonuclease H-like protein [Stereum hirsutum FP-91666 SS1]
Length = 230
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 74/153 (48%), Gaps = 12/153 (7%)
Query: 343 EWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGY 402
EWKPN+ KG N V+++QI S+E + I + ++ +LD L SP + K G
Sbjct: 2 EWKPNFSKGLPENPVAVVQIGSEESILIVQISAMSAFPQTLLD-----FLASPHVFKAGV 56
Query: 403 NFQCDIKQLAHSYGEL--ECFKHYEMLLDIQNVFKEP---KGGLSGLAEKILGAGLNKTR 457
Q D K+L YG C + +K P GL+ L E L L K R
Sbjct: 57 GIQGDCKKLWKDYGVSINACVDLSPLARSCDPQWKGPYRNPIGLARLTEMYLDRRLPKGR 116
Query: 458 -RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
+ S+W R LS QLEYAA DA+ L I++ +
Sbjct: 117 VQRSDW-SRALSSLQLEYAANDAISALAIYYRL 148
>gi|326432840|gb|EGD78410.1| hypothetical protein PTSG_09106 [Salpingoeca sp. ATCC 50818]
Length = 1063
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 96/195 (49%), Gaps = 33/195 (16%)
Query: 316 IIWVDEVDGLHKAI--CHIEGCKV---------VGIDCEWKPNYVKGCKMNKVSIMQIAS 364
+ W+D GL + + H+ +V VGID EW+ V ++MQIA
Sbjct: 873 VAWIDTEQGLCEMVDCLHVRASEVSSVDGRPMLVGIDTEWRQPRVA------CTVMQIAV 926
Query: 365 DEMVFIFDLI------KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAH----- 413
+ V+I D + + A+ V +L+ + + LG++F+ D++ +
Sbjct: 927 CDSVWIVDTLIHTKTKQYAQHVAALLEF----LFACEHVHVLGFSFKDDVRHIIPLCPVL 982
Query: 414 SYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLE 473
+ L F + L+ Q + K+ + LS E++ G LNK + SNWE+RPL ++QLE
Sbjct: 983 ASKPLVSFTDVQQLVRRQ-LKKKGQPSLSLACERVFGRPLNKMEQCSNWERRPLRRDQLE 1041
Query: 474 YAALDAVVLLQIFHH 488
YAA+DA L+ I+ H
Sbjct: 1042 YAAIDAWCLIGIYSH 1056
>gi|224538568|ref|ZP_03679107.1| hypothetical protein BACCELL_03462 [Bacteroides cellulosilyticus
DSM 14838]
gi|423221874|ref|ZP_17208344.1| hypothetical protein HMPREF1062_00530 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224519812|gb|EEF88917.1| hypothetical protein BACCELL_03462 [Bacteroides cellulosilyticus
DSM 14838]
gi|392645292|gb|EIY39021.1| hypothetical protein HMPREF1062_00530 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 215
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 91/171 (53%), Gaps = 23/171 (13%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
KA+ +++ ++GID E +P++ KG + +KV+++Q++S+E F+F L +P
Sbjct: 35 KAVTYLKKYSLLGIDSETRPSFTKG-QSHKVALLQVSSEEDCFLFRLNLTGLTLP----- 88
Query: 387 CLTRILQSPGILKLGYNFQCDIKQL-------AHSYGELECFKHYEMLLDIQNVFKEPKG 439
+ +L+SP + K+G + + D L HS EL+ Y + IQ+
Sbjct: 89 -IISLLESPSVTKVGLSLRDDFMMLHKRAPFEQHSCIELQ---EYVRMFGIQD------K 138
Query: 440 GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
L + + G ++K++R SNWE L++ Q +YAA DA L I++ ++
Sbjct: 139 SLQKIYGILFGEKISKSQRLSNWEAEHLTEPQKQYAATDAWACLNIYNRLQ 189
>gi|357059998|ref|ZP_09120772.1| hypothetical protein HMPREF9332_00329 [Alloprevotella rava F0323]
gi|355376888|gb|EHG24128.1| hypothetical protein HMPREF9332_00329 [Alloprevotella rava F0323]
Length = 210
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 22/184 (11%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
+A+ +E K++GID E +P++ KG ++V+++QIA++++ F+F L +P
Sbjct: 36 RAVAALEKSKILGIDTETRPSFRKGV-FHQVALLQIANEDICFLFRLNSFGF-IP----- 88
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE---PKGGLSG 443
L ++L + ILK+G + + DI LA + + + LD+Q+ KE L
Sbjct: 89 SLRKLLANKEILKIGLSLKDDIHMLAQRHAFVP-----DHFLDLQDYVKEMGIQDMSLQK 143
Query: 444 LAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDA---VVLLQIFHHVRSCS----QPT 496
L + ++K + SNWE LS Q YAA DA ++L H+R +P
Sbjct: 144 LFANVFHLRISKNAQLSNWEADVLSPAQKTYAATDAYSCIMLYNELKHLRETGFILLKPQ 203
Query: 497 DVSE 500
VSE
Sbjct: 204 PVSE 207
>gi|380694086|ref|ZP_09858945.1| hypothetical protein BfaeM_08908 [Bacteroides faecis MAJ27]
Length = 216
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 84/164 (51%), Gaps = 13/164 (7%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
KA+ +++ ++GID E +P++ KG + +KV+++QI+SDE F+F L P
Sbjct: 34 EKAVAYLKSQPILGIDSETRPSFTKG-QSHKVALLQISSDECCFLFRLNMTGLTQP---- 88
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQL--AHSYGELECFKHYEMLLDIQNVFKEPKGGLSG 443
L +L++P ++K+G + + D L + + C + L D F L
Sbjct: 89 --LVDLLENPAVIKVGLSLKDDFMMLHKRAPFTQQSCIE----LQDYVRQFGIQDKSLQK 142
Query: 444 LAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
+ + ++K++R SNWE LS Q +YAA DA L I++
Sbjct: 143 IYAILFKEKISKSQRLSNWEADVLSDGQKQYAATDAWACLNIYN 186
>gi|357122944|ref|XP_003563173.1| PREDICTED: probable exonuclease mut-7 homolog [Brachypodium
distachyon]
Length = 492
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 91/193 (47%), Gaps = 42/193 (21%)
Query: 332 IEGCKVVGIDCEWKPNY--------VKGCK--------MNKVSIMQIASD-----EMVFI 370
+ +VV +D EWKP V G V+++Q+A VF+
Sbjct: 32 LAAARVVALDAEWKPRRRGASAPGPVDGASPALPNPPLFPTVTVLQLACRGEEGCSEVFV 91
Query: 371 FDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY----GELECFKHYEM 426
DL LA + D+ + L ++ + P LKLG+ F+ D+ L+ ++ G F E
Sbjct: 92 VDL--LAVPLADLW-APLRQLFERPDALKLGFRFKQDLVYLSATFTAALGSDSRFDRVEA 148
Query: 427 LLDIQNVF-------------KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLE 473
LD+ NV+ KE K L+ + E++L L+K + S+W RPLS+ Q++
Sbjct: 149 FLDVTNVYYYLMGHDRQKRLPKETKS-LATICEELLNVSLSKELQCSDWSCRPLSEGQIQ 207
Query: 474 YAALDAVVLLQIF 486
YAA DA LL IF
Sbjct: 208 YAASDAYYLLDIF 220
>gi|153807650|ref|ZP_01960318.1| hypothetical protein BACCAC_01932 [Bacteroides caccae ATCC 43185]
gi|423217361|ref|ZP_17203857.1| hypothetical protein HMPREF1061_00630 [Bacteroides caccae
CL03T12C61]
gi|149130012|gb|EDM21224.1| 3'-5' exonuclease [Bacteroides caccae ATCC 43185]
gi|392628520|gb|EIY22546.1| hypothetical protein HMPREF1061_00630 [Bacteroides caccae
CL03T12C61]
Length = 214
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 84/164 (51%), Gaps = 13/164 (7%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
KA+ ++ ++GID E +P++ KG + +KV+++QI+S+E F+F L P
Sbjct: 34 EKAVAYLLSQPILGIDSETRPSFTKG-QSHKVALLQISSEECCFLFRLNMTGLTQP---- 88
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAH--SYGELECFKHYEMLLDIQNVFKEPKGGLSG 443
L +L++PGI+K+G + + D L + + C + L D F L
Sbjct: 89 --LVDLLENPGIIKVGLSLKDDFMMLHKRAPFNQQSCIE----LQDYVRQFGIQDKSLQK 142
Query: 444 LAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
+ + ++K++R SNWE LS Q +YAA DA L I++
Sbjct: 143 IYAILFKEKISKSQRLSNWEADVLSDGQKQYAATDAWACLNIYN 186
>gi|189467792|ref|ZP_03016577.1| hypothetical protein BACINT_04184 [Bacteroides intestinalis DSM
17393]
gi|189436056|gb|EDV05041.1| 3'-5' exonuclease [Bacteroides intestinalis DSM 17393]
Length = 210
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 94/185 (50%), Gaps = 19/185 (10%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
KA+ +++ ++GID E +P++ KG + +KV+++Q++S++ F+F L +P
Sbjct: 35 KAVTYLKQYPLLGIDSETRPSFTKG-QSHKVALLQVSSEKDCFLFRLNLTGLTLP----- 88
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELE---C--FKHYEMLLDIQNVFKEPKGGL 441
+ +L+SP + K+G + + D L H E C + Y + IQ+ L
Sbjct: 89 -IISLLESPSVTKVGLSLRDDFMML-HKRAPFEQRACIELQEYVRMFGIQD------KSL 140
Query: 442 SGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSEG 501
+ + G ++K++R SNWE L++ Q +YAA DA L I++ ++ D
Sbjct: 141 QKIYGILFGEKISKSQRLSNWEAEHLTEPQKQYAATDAWACLNIYNRLQELKISGDYELA 200
Query: 502 HDKIE 506
D+ E
Sbjct: 201 PDETE 205
>gi|345892380|ref|ZP_08843202.1| hypothetical protein HMPREF1022_01862 [Desulfovibrio sp.
6_1_46AFAA]
gi|345047282|gb|EGW51148.1| hypothetical protein HMPREF1022_01862 [Desulfovibrio sp.
6_1_46AFAA]
Length = 216
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 15/167 (8%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
+A+ + V+G D E +P + KG K+N S++Q+A++ V++ L L
Sbjct: 34 QALPDLRADGVLGFDTETRPTFRKG-KINAPSLIQLATERAVYLVQLAWLP------FGP 86
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV---FKEPKGGLSG 443
L IL P ++K G + D+++L+ L F+ L+D+ N K P GL
Sbjct: 87 HLAEILADPNVIKAGVGIRDDMRELSR----LHDFEPAG-LVDLGNAARAHKLPSQGLRT 141
Query: 444 LAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
LA + G ++K + SNW LSQ Q+ YAA DA + IF +R
Sbjct: 142 LAANLFGWRISKGSQCSNWSLMELSQRQIAYAATDAWIGRLIFLRMR 188
>gi|303325512|ref|ZP_07355955.1| 3'- 5' exonuclease domain protein [Desulfovibrio sp. 3_1_syn3]
gi|302863428|gb|EFL86359.1| 3'- 5' exonuclease domain protein [Desulfovibrio sp. 3_1_syn3]
Length = 216
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 15/167 (8%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
+A+ + V+G D E +P + KG K+N S++Q+A++ V++ L L
Sbjct: 34 QALPDLRADGVLGFDTETRPTFRKG-KINAPSLIQLATERAVYLVQLAWLP------FGP 86
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV---FKEPKGGLSG 443
L IL P ++K G + D+++L+ L F+ L+D+ N K P GL
Sbjct: 87 HLAEILADPNVIKAGVGIRDDMRELSR----LHDFEPAG-LVDLGNAARAHKLPSQGLRT 141
Query: 444 LAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
LA + G ++K + SNW LSQ Q+ YAA DA + IF +R
Sbjct: 142 LAANLFGWRISKGSQCSNWSLMELSQRQIAYAATDAWIGRLIFLRMR 188
>gi|157110292|ref|XP_001651037.1| hypothetical protein AaeL_AAEL005527 [Aedes aegypti]
gi|122068562|sp|Q179T2.1|MUT7_AEDAE RecName: Full=Probable exonuclease mut-7 homolog; AltName:
Full=Exonuclease 3'-5' domain-containing protein 3
homolog
gi|108878761|gb|EAT42986.1| AAEL005527-PA [Aedes aegypti]
Length = 719
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 22/189 (11%)
Query: 319 VDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAE 378
VD D + + + ++ D EWKP + N+VS++Q+A+ + V++ D++ +++
Sbjct: 440 VDSKDKFYAMLSDLCRQSMIAFDSEWKPTFGGA---NEVSLIQLATWDDVYMIDVM-VSQ 495
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAH---SYGELECFKHYEMLLDIQ---- 431
P + + +LKL + DI S+ + + +LD+Q
Sbjct: 496 LEPLDWAALAKNVFNRDDVLKLSFAPSTDISMFQKALPSFNVMYSSQSTSAILDLQLLWR 555
Query: 432 -----NVFKEP------KGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAV 480
+ F+ P L+ L LG L+K+ + SNW QRPL + QL YAALDA
Sbjct: 556 HVERFDSFRFPYHEESVNQNLANLVRLCLGKKLDKSNQFSNWAQRPLRKEQLRYAALDAF 615
Query: 481 VLLQIFHHV 489
LL+I+ +
Sbjct: 616 CLLEIYDAI 624
>gi|313145540|ref|ZP_07807733.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|423279805|ref|ZP_17258718.1| hypothetical protein HMPREF1203_02935 [Bacteroides fragilis HMW
610]
gi|424662129|ref|ZP_18099166.1| hypothetical protein HMPREF1205_02515 [Bacteroides fragilis HMW
616]
gi|313134307|gb|EFR51667.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|404577918|gb|EKA82654.1| hypothetical protein HMPREF1205_02515 [Bacteroides fragilis HMW
616]
gi|404584793|gb|EKA89437.1| hypothetical protein HMPREF1203_02935 [Bacteroides fragilis HMW
610]
Length = 215
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 21/167 (12%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
KA+ +++ ++GID E +P++ KG +KV+++QI+SDE F+F L P
Sbjct: 35 KAVAYLQSQAILGIDSETRPSFTKG-HSHKVALLQISSDECCFLFRLNMTGLTQP----- 88
Query: 387 CLTRILQSPGILKLGYNFQCDIKQL--AHSYGELECFKHYEMLLDIQNVFKEPKGGLSGL 444
+ +L++P ++K+G + + D L + + C + E + P G
Sbjct: 89 -IIELLENPEVIKVGLSLKDDFMMLHKRAPFNQQACIELQE--------YVRPFGIQDKS 139
Query: 445 AEKILG----AGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
+KI G ++K++R SNWE L+ Q +YAA DA L I+H
Sbjct: 140 LQKIYGILFREKISKSQRLSNWEADVLTDAQKQYAATDAWACLNIYH 186
>gi|53712323|ref|YP_098315.1| hypothetical protein BF1031 [Bacteroides fragilis YCH46]
gi|60680496|ref|YP_210640.1| 3'-5' exonuclease [Bacteroides fragilis NCTC 9343]
gi|336408541|ref|ZP_08589032.1| hypothetical protein HMPREF1018_01047 [Bacteroides sp. 2_1_56FAA]
gi|375357352|ref|YP_005110124.1| putative 3'-5' exonuclease [Bacteroides fragilis 638R]
gi|383117263|ref|ZP_09938009.1| hypothetical protein BSHG_0617 [Bacteroides sp. 3_2_5]
gi|423248984|ref|ZP_17230000.1| hypothetical protein HMPREF1066_01010 [Bacteroides fragilis
CL03T00C08]
gi|423256706|ref|ZP_17237634.1| hypothetical protein HMPREF1067_04278 [Bacteroides fragilis
CL03T12C07]
gi|423258685|ref|ZP_17239608.1| hypothetical protein HMPREF1055_01885 [Bacteroides fragilis
CL07T00C01]
gi|423264343|ref|ZP_17243346.1| hypothetical protein HMPREF1056_01033 [Bacteroides fragilis
CL07T12C05]
gi|423269089|ref|ZP_17248061.1| hypothetical protein HMPREF1079_01143 [Bacteroides fragilis
CL05T00C42]
gi|423273350|ref|ZP_17252297.1| hypothetical protein HMPREF1080_00950 [Bacteroides fragilis
CL05T12C13]
gi|423281785|ref|ZP_17260670.1| hypothetical protein HMPREF1204_00208 [Bacteroides fragilis HMW
615]
gi|52215188|dbj|BAD47781.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
gi|60491930|emb|CAH06690.1| putative 3'-5' exonuclease [Bacteroides fragilis NCTC 9343]
gi|251947416|gb|EES87698.1| hypothetical protein BSHG_0617 [Bacteroides sp. 3_2_5]
gi|301162033|emb|CBW21577.1| putative 3'-5' exonuclease [Bacteroides fragilis 638R]
gi|335935762|gb|EGM97710.1| hypothetical protein HMPREF1018_01047 [Bacteroides sp. 2_1_56FAA]
gi|387776265|gb|EIK38365.1| hypothetical protein HMPREF1055_01885 [Bacteroides fragilis
CL07T00C01]
gi|392648705|gb|EIY42393.1| hypothetical protein HMPREF1067_04278 [Bacteroides fragilis
CL03T12C07]
gi|392656531|gb|EIY50169.1| hypothetical protein HMPREF1066_01010 [Bacteroides fragilis
CL03T00C08]
gi|392702398|gb|EIY95544.1| hypothetical protein HMPREF1079_01143 [Bacteroides fragilis
CL05T00C42]
gi|392706609|gb|EIY99732.1| hypothetical protein HMPREF1056_01033 [Bacteroides fragilis
CL07T12C05]
gi|392707951|gb|EIZ01064.1| hypothetical protein HMPREF1080_00950 [Bacteroides fragilis
CL05T12C13]
gi|404582826|gb|EKA87517.1| hypothetical protein HMPREF1204_00208 [Bacteroides fragilis HMW
615]
Length = 216
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 21/168 (12%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
KA+ +++ ++GID E +P++ KG +KV+++QI+SDE F+F L P
Sbjct: 34 QKAVAYLQSQAILGIDSETRPSFTKG-HSHKVALLQISSDECCFLFRLNMTGLTQP---- 88
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQL--AHSYGELECFKHYEMLLDIQNVFKEPKGGLSG 443
+ +L+ P ++K+G + + D L + + C + E + P G
Sbjct: 89 --IIELLEDPKVIKVGLSLKDDFMMLHKRAPFNQQACIELQE--------YVRPFGIQDK 138
Query: 444 LAEKILG----AGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
+KI G ++K++R SNWE L+ Q +YAA DA L I+H
Sbjct: 139 SLQKIYGILFSEKISKSQRLSNWEADVLTDAQKQYAATDAWACLNIYH 186
>gi|311748079|ref|ZP_07721864.1| 3'- 5' exonuclease domain protein [Algoriphagus sp. PR1]
gi|126574723|gb|EAZ79104.1| 3'- 5' exonuclease domain protein [Algoriphagus sp. PR1]
Length = 201
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 92/181 (50%), Gaps = 17/181 (9%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
++ +D+ + + +A + ++G D E KP + +G +N+V+++Q+++ F+F L
Sbjct: 22 EMFLIDQKEDVEEAAEFLSKQSIIGFDTETKPAFRRGV-INQVALLQLSTATQAFLFRLN 80
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAH---SYGELECFKHYEML--LD 429
++ E PD L IL+ I+K+G DIK LA S+ L F + L +
Sbjct: 81 EIGE-FPD----SLRNILEKESIVKVGAAVHDDIKGLAKLTDSFFPLSFFDLNDELKKVG 135
Query: 430 IQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
NV G+ L +L ++K+ + SNWE L++ Q YAA DA L++F +
Sbjct: 136 FHNV------GVRNLCAMVLKMRISKSEQVSNWEAEVLTEKQQRYAATDAWACLEVFKKL 189
Query: 490 R 490
+
Sbjct: 190 K 190
>gi|418749157|ref|ZP_13305449.1| 3'-5' exonuclease [Leptospira licerasiae str. MMD4847]
gi|418757399|ref|ZP_13313587.1| 3'-5' exonuclease domain / HRDC domain multi-domain protein
[Leptospira licerasiae serovar Varillal str. VAR 010]
gi|384117070|gb|EIE03327.1| 3'-5' exonuclease domain / HRDC domain multi-domain protein
[Leptospira licerasiae serovar Varillal str. VAR 010]
gi|404276226|gb|EJZ43540.1| 3'-5' exonuclease [Leptospira licerasiae str. MMD4847]
Length = 389
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 90/183 (49%), Gaps = 27/183 (14%)
Query: 312 VVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIF 371
+ D I VD V L A+ + + ID E Y +KV ++QI+S +IF
Sbjct: 3 IQSDYIVVDNVRSLQLALITLSQSDCLSIDTESSGYY---TYYSKVCLIQISSKGKNYIF 59
Query: 372 DLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEM----- 426
D I+L +D+ + L + ++P ILK+ ++ DIK L +G FK +
Sbjct: 60 DPIRL-DDL-----NGLGPLFENPNILKIFHSASDDIKALKRDFG----FKFINIADTMF 109
Query: 427 ---LLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLL 483
LLD++ + L L E L+K + SNWE+RPL ++QL+YAALD V L
Sbjct: 110 SSRLLDLE------QNSLLYLVEHYHKVKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLE 163
Query: 484 QIF 486
I+
Sbjct: 164 SIW 166
>gi|390941796|ref|YP_006405557.1| ribonuclease D [Belliella baltica DSM 15883]
gi|390415224|gb|AFL82802.1| ribonuclease D [Belliella baltica DSM 15883]
Length = 200
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 94/181 (51%), Gaps = 18/181 (9%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
+I+ V+ +D + + + + ++G D E KP + KG N VS++Q+++ ++ F+ L
Sbjct: 22 EIVLVNSMDQVQEVVDELSMHDLIGFDTETKPAFRKGV-YNYVSLLQLSTSDVAFLIRLN 80
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQL---AHSYGELECFKHYEML--LD 429
++ L + +I++ P +LK+G D++ L A + F + L +
Sbjct: 81 EIG------LPKEIQKIMEDPSVLKIGAAVLDDLRALRKHAEDFTPASFFDLNDQLKKVG 134
Query: 430 IQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
QN+ G+ LA +L ++K+ + SNWE L++ Q+ YAA DA V L+I+ +
Sbjct: 135 FQNI------GVRNLAAMVLEIRISKSEQVSNWEAPTLTEKQMLYAATDAWVCLEIYKKL 188
Query: 490 R 490
+
Sbjct: 189 Q 189
>gi|265762514|ref|ZP_06091082.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|263255122|gb|EEZ26468.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 216
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 21/168 (12%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
KA+ +++ ++GID E +P++ KG +KV+++QI+SDE F+F L P
Sbjct: 34 QKAVVYLQSQTILGIDSETRPSFTKG-HSHKVALLQISSDECCFLFRLNMTGLTQP---- 88
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAH--SYGELECFKHYEMLLDIQNVFKEPKGGLSG 443
+ +L+ P ++K+G + + D L + + C + E + P G
Sbjct: 89 --IIELLEDPKVIKVGLSLKDDFMMLHKRAPFNQQACIELQE--------YVRPFGIQDK 138
Query: 444 LAEKILG----AGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
+KI G ++K++R SNWE L+ Q +YAA DA L I+H
Sbjct: 139 SLQKIYGILFSEKISKSQRLSNWEADVLTDAQKQYAATDAWACLNIYH 186
>gi|225437612|ref|XP_002271430.1| PREDICTED: Werner Syndrome-like exonuclease-like [Vitis vinifera]
Length = 196
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 82/179 (45%), Gaps = 21/179 (11%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
WV+ + +++ G +VG+DCEW P ++ G N+++ +Q+ D I L
Sbjct: 28 WVNTILAVYRG-----GDMIVGLDCEWSPTFLSGTS-NRIATLQLCVDTKCLILQLF--- 78
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELEC-----FKHYEMLLDIQN 432
D + L +P + +G + D +L Y EL+C +
Sbjct: 79 --YTDYIPQSFKNFLSNPAVTFVGVEVESDAMKLRDEY-ELDCQETSNIRALACSFWPNR 135
Query: 433 VFKEPKGGLSGLAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
++ P GL LA +I+G + K +SNWE R LS Q+EYA++DA +I H +
Sbjct: 136 WYRRP--GLKDLAFQIVGLLMQKPIHVCSSNWEARILSNEQVEYASIDAYASYRIGHRL 192
>gi|213409039|ref|XP_002175290.1| conserved hypothetical protein [Schizosaccharomyces japonicus
yFS275]
gi|212003337|gb|EEB08997.1| conserved hypothetical protein [Schizosaccharomyces japonicus
yFS275]
Length = 315
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 20/183 (10%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
+++V+ GL+K + ++ V+G D EW VS++QI + +++ + L +
Sbjct: 102 VVYVNSEAGLNKYMHELQSSPVLGFDMEW-------TYRTPVSMIQICTSKLILLVHLTR 154
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY-----GELECFKHYEMLLDI 430
+ P+ L +++SP +K G Q D +L ++ G E Y +D
Sbjct: 155 MRIYSPEYFPRRLKELMESPDHIKCGVAIQGDATRLLKAFQVSSKGLCE-LSRYARAVDP 213
Query: 431 QNVFKEPKG------GLSGLAEKILGAGLNKTR-RNSNWEQRPLSQNQLEYAALDAVVLL 483
+ P+ L+ LA + LG L+K + SNW+Q L +QL+YAA+D L
Sbjct: 214 ETWIGNPRTSGNRLIALTKLAHQYLGLPLDKGPVQVSNWDQGKLKASQLQYAAIDVYASL 273
Query: 484 QIF 486
QIF
Sbjct: 274 QIF 276
>gi|428170043|gb|EKX38971.1| hypothetical protein GUITHDRAFT_143786 [Guillardia theta CCMP2712]
Length = 694
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 21/175 (12%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
+GID EWKP + + N+VS+MQ+++ K + + L ++++
Sbjct: 512 AIGIDAEWKP-IRRTNERNRVSLMQLSTTTNECRRGSWKKPKG--QLFCQSLKNVVENSK 568
Query: 397 ILKLGYNFQCDIKQLAHSYGELECF----------KHYEMLLDIQNVFKEPK-------G 439
I+KLG+ + DI+++ ++ + + D+ + K +
Sbjct: 569 IVKLGFELRDDIRKIRQVGADMTQLGPLVEADAQDRQVNGVFDLSHWAKSSRPRTKKYQS 628
Query: 440 GLSGLAEKIL-GAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCS 493
L+GL+ ++L GA LNK + S+W QRPLS QL YAALDA+VLL +F S
Sbjct: 629 SLAGLSREVLDGAELNKEQAMSDWSQRPLSAPQLRYAALDALVLLPLFKEAAKSS 683
>gi|340353938|ref|ZP_08676733.1| hypothetical protein HMPREF9144_2545 [Prevotella pallens ATCC
700821]
gi|339607858|gb|EGQ12781.1| hypothetical protein HMPREF9144_2545 [Prevotella pallens ATCC
700821]
Length = 227
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 103/205 (50%), Gaps = 29/205 (14%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
I+ + E + +KA+ + ++GID E +P + KG + +KV+++Q+++ ++ F+F L
Sbjct: 27 IVVITETEA-NKAVDFLLSADILGIDSETRPVFKKG-QHHKVALLQVSTKDVCFLFRLNL 84
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK 435
+ + +C+ R+L+ +LK+G + D L H E + + +D+QN+
Sbjct: 85 IG------MPACIVRLLEDTTVLKVGLSLHDDFSML-HQRAEFKIGR----FIDLQNIVS 133
Query: 436 EPKGGLSGLAEKILGAGL-----NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF---- 486
E G+ L+ + L A L K ++ SNWE L++ Q YAA DA +Q++
Sbjct: 134 E--FGIEDLSLQKLYANLFHERITKRQQLSNWEAPILTEQQKIYAATDAWTCIQLYERLE 191
Query: 487 -----HHVRSCSQPTDVSEGHDKIE 506
H+ + PTD E I+
Sbjct: 192 ELHKTHNYETVIVPTDEPETTKNID 216
>gi|260805242|ref|XP_002597496.1| hypothetical protein BRAFLDRAFT_156042 [Branchiostoma floridae]
gi|229282761|gb|EEN53508.1| hypothetical protein BRAFLDRAFT_156042 [Branchiostoma floridae]
Length = 505
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDE-MVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
V+G DCEW +G VS++Q+AS +F + +L + + C+ +L +
Sbjct: 1 VLGFDCEW---VTRGGTTRPVSLLQLASRTGECGLFRVCRLNDGT---IPRCVRDLLANK 54
Query: 396 GILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLN 454
+LK+G D ++L YG + L + K GL LAE++LG ++
Sbjct: 55 NVLKVGVACWEDSRRLERDYGITVRGCVDLRHLAIRHKSLQSGKLGLQALAEQVLGVKMD 114
Query: 455 KTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
K+R R SNWE LS+ Q+ YAA DA+V + IF
Sbjct: 115 KSRTVRCSNWEASKLSEEQITYAANDALVSVDIF 148
>gi|299140705|ref|ZP_07033843.1| 3'-5' exonuclease domain protein [Prevotella oris C735]
gi|298577671|gb|EFI49539.1| 3'-5' exonuclease domain protein [Prevotella oris C735]
Length = 223
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 89/175 (50%), Gaps = 10/175 (5%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
I + E D KA+ ++ C ++G+D E +P + KG + +KV+++Q+AS + F+F L
Sbjct: 27 ITVISEADA-DKAVDYLLSCDILGVDTETRPTFHKG-EQHKVALLQVASHDTCFLFRLND 84
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK 435
+ + + + R+L+ + K+G ++ DI L H E E ++ L DI
Sbjct: 85 IG------MPASVIRLLEDRTVPKIGLSWHDDILSL-HRRSEFEP-GYFIDLQDIVGKIG 136
Query: 436 EPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
L L I ++K +R +NWE L+ Q +YAA DA ++++ +R
Sbjct: 137 IKDLSLQKLYANIFHQKISKRQRLTNWEAGVLTDKQKQYAATDAWTCIKLYEEIR 191
>gi|125987467|ref|XP_001357496.1| GA21642 [Drosophila pseudoobscura pseudoobscura]
gi|54645828|gb|EAL34566.1| GA21642 [Drosophila pseudoobscura pseudoobscura]
Length = 625
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 22/196 (11%)
Query: 310 ELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVF 369
+L + +I VD + H++ ++ +D EW N C +++ ++QIA+ V+
Sbjct: 402 DLADDCLITVDTATQFDLMLGHLQREHIIYMDSEWVQNV---CGESQLCLLQIATVRNVY 458
Query: 370 IFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIK------------QLAHSYGE 417
+ D + D + + + ILK+G++ D+ QL+H Y +
Sbjct: 459 LIDCLARQSITADHWRALGADVFNNMNILKVGFSMYSDLTVLQRSLPLQLRLQLSHHYLD 518
Query: 418 LECF------KHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQ 471
L + Y + L NV LS L+ LG LNK+ + SNW RPL ++Q
Sbjct: 519 LRTLWLELKKQRYAIRLPFGNV-NRAGDALSDLSLVCLGKKLNKSNQCSNWANRPLRRDQ 577
Query: 472 LEYAALDAVVLLQIFH 487
+ YAA+DA L+ I++
Sbjct: 578 ILYAAIDARCLMLIYN 593
>gi|226503994|ref|NP_001150086.1| LOC100283715 [Zea mays]
gi|195636594|gb|ACG37765.1| 3-5 exonuclease/ nucleic acid binding protein [Zea mays]
Length = 200
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 16/173 (9%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
W+DE+ +H+ H VVG+D EW+P++ + +K +I+Q+ IF L+ A
Sbjct: 30 WLDEILSVHRRRLH---KLVVGLDVEWRPSFSRA--YSKTAILQLCVGRRCLIFQLLH-A 83
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEP 437
+ VP+ LD L P +G D+++L + Y +LE ++ P
Sbjct: 84 DYVPNTLD----EFLSDPDYTFVGVGVAADVERLENDY-DLEVANAEDLAELAAKEMGHP 138
Query: 438 ---KGGLSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQI 485
GL G+A ++ A + K + R W+ LS Q+EYA +DA V ++
Sbjct: 139 DLRNAGLQGIARVVMDAHVEKPQWVRTGPWDASSLSDEQIEYATIDAFVSFEV 191
>gi|419955518|ref|ZP_14471645.1| 3'-5' exonuclease [Pseudomonas stutzeri TS44]
gi|387967688|gb|EIK51986.1| 3'-5' exonuclease [Pseudomonas stutzeri TS44]
Length = 228
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 90/184 (48%), Gaps = 21/184 (11%)
Query: 311 LVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFI 370
L I+ + L AI + C VG D E +P + G ++Q+A+ ++
Sbjct: 22 LTAAHIVMPADATALASAIGELRACPCVGFDTESRPTFRVGEVSTGPHLIQLATPTQAYL 81
Query: 371 FDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYG-EL-ECFKHYEMLL 428
F + VP +++ T ILQ+P +LK+G+ + D +L G EL C L
Sbjct: 82 FQVA-----VPGCVEAART-ILQAPDVLKIGFGLKADRSRLRGRLGIELANC-------L 128
Query: 429 DIQNV--FKEPKG--GLSGLAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVL 482
D+ V +++ KG GL G +LGA ++K+RR SNW LS+ Q YAA DA
Sbjct: 129 DLGTVLRYQDRKGQVGLRGAVAGVLGARIHKSRRVATSNWASAKLSEVQQAYAANDAYAA 188
Query: 483 LQIF 486
LQ+F
Sbjct: 189 LQVF 192
>gi|291239803|ref|XP_002739809.1| PREDICTED: exonuclease 3-5 domain containing 2-like [Saccoglossus
kowalevskii]
Length = 682
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 88/178 (49%), Gaps = 25/178 (14%)
Query: 321 EVDGLHKAIC-HIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAED 379
+VD L + +C +V+G+DCEW V G N VS++Q+++ + ++ + ++
Sbjct: 150 QVDALSRRLCLQNTEWQVLGLDCEWVS--VDG-HPNPVSLLQLSTLDYCYLIQIHRIQPM 206
Query: 380 VPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELE---------CFKHYEMLLDI 430
+P+ CL ILQ ILK+G D K+L H Y L F+H L
Sbjct: 207 LPE----CLIDILQDKSILKVGVGIMEDAKKLLHDYKMLVRGCVDLRTFTFRHRPQLK-- 260
Query: 431 QNVFKEPKGGLSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
+ G L+ L+ +ILG ++K+ R NWE S Q+ YAA DAV +QIF
Sbjct: 261 ----RCITGSLADLSYEILGKEMDKSLDVRCGNWEAVDFSDVQISYAAEDAVSSVQIF 314
>gi|414881130|tpg|DAA58261.1| TPA: 3-5 exonuclease/ nucleic acid binding protein [Zea mays]
Length = 200
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 16/173 (9%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
W+DE+ +H+ H VVG+D EW+P++ + +K +I+Q+ IF L+ A
Sbjct: 30 WLDEILSVHRRRLH---KLVVGLDVEWRPSFSRA--YSKTAILQLCVGRRCLIFQLLH-A 83
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEP 437
+ VP+ LD L P +G D+++L + Y +LE ++ P
Sbjct: 84 DYVPNTLD----EFLSDPDYTFVGVGVAADVERLENDY-DLEVANAEDLAELAAKEMGHP 138
Query: 438 ---KGGLSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQI 485
GL G+A ++ A + K + R W+ LS Q+EYA +DA V ++
Sbjct: 139 DLRNAGLQGIARVVMDAHVEKPQWVRTGPWDASSLSDEQIEYATIDAFVSFEV 191
>gi|281425845|ref|ZP_06256758.1| 3- 5 exonuclease domain protein [Prevotella oris F0302]
gi|281400106|gb|EFB30937.1| 3- 5 exonuclease domain protein [Prevotella oris F0302]
Length = 227
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 89/175 (50%), Gaps = 10/175 (5%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
I + E D KA+ ++ C ++G+D E +P + KG + +KV+++Q+AS + F+F L
Sbjct: 31 ITVISEADA-DKAVDYLLSCDILGVDTETRPTFHKG-EQHKVALLQVASHDTCFLFRLND 88
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK 435
+ + + + R+L+ + K+G ++ DI L H E E ++ L DI
Sbjct: 89 IG------MPASVIRLLEDRTVPKIGLSWHDDILSL-HRRSEFEP-GYFIDLQDIVGKIG 140
Query: 436 EPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
L L I ++K +R +NWE L+ Q +YAA DA ++++ +R
Sbjct: 141 IKDLSLQKLYANIFHQKISKRQRLTNWEAGVLTDKQKQYAATDAWTCIKLYEEIR 195
>gi|403221686|dbj|BAM39818.1| uncharacterized protein TOT_020000089 [Theileria orientalis strain
Shintoku]
Length = 249
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 83/163 (50%), Gaps = 11/163 (6%)
Query: 328 AICHIEGCKVVGIDCEWKPNYV----KGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDV 383
+I H+ K++G D E P+Y + K SI+QI D + FI+ L K+ VP+
Sbjct: 72 SIDHLLDTKLIGFDLEHVPDYYTFVNSSSRKCKPSIVQICGDSVCFIYLLYKIGH-VPE- 129
Query: 384 LDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSG 443
L+RIL S +LK+ + D++ + YG C +++ L+D+ + L
Sbjct: 130 ---SLSRILDSKDMLKVAHGAPSDMRLMFRHYGT-RC-RNFVDLIDLCSRNNISPASLKN 184
Query: 444 LAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
E +L L K ++ SNWE L+ +Q+ YA+ DA V +IF
Sbjct: 185 ATESVLKLKLCKKQQCSNWEAEELNSDQISYASTDAWVAREIF 227
>gi|195051841|ref|XP_001993181.1| GH13217 [Drosophila grimshawi]
gi|193900240|gb|EDV99106.1| GH13217 [Drosophila grimshawi]
Length = 632
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 26/197 (13%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
+I VD + H++ +++ +D EW N C N++ ++QIA+ V++ D +
Sbjct: 416 LIIVDTAPIFEHMLQHLQREQIIYMDAEWMQNV---CVQNQLCLLQIATTHNVYLIDCLA 472
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYG---ELECFKHYEMLLDIQN 432
D + + + ILK+G++ D+ L S L HY LD++
Sbjct: 473 NQALHEDHWRALGATVFNNVNILKVGFSMLNDLSVLQRSLPLQLRLHMPHHY---LDLRT 529
Query: 433 VFKE----------PKGGLSGLAEKI-------LGAGLNKTRRNSNWEQRPLSQNQLEYA 475
V+ E P G L+ + + LG LNK + SNW RPL + Q+ YA
Sbjct: 530 VWLELKKQRHGIELPFGNLNRAGDALTDLTMLCLGKKLNKANQCSNWANRPLRREQILYA 589
Query: 476 ALDAVVLLQIFHHVRSC 492
A+DA LL I+ + C
Sbjct: 590 AIDARCLLHIYDCLTGC 606
>gi|115457358|ref|NP_001052279.1| Os04g0225100 [Oryza sativa Japonica Group]
gi|38344132|emb|CAD39842.2| OSJNBb0072N21.11 [Oryza sativa Japonica Group]
gi|113563850|dbj|BAF14193.1| Os04g0225100 [Oryza sativa Japonica Group]
Length = 211
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 19/182 (10%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNY-VKGCKMNKVSIMQIASDEMVFIFDLIKL 376
W+ E +H++ H VVG+D EW+P V G V+++Q+ D +F ++
Sbjct: 39 WLGETYRIHRSCGHP---LVVGLDVEWRPAAPVPG----PVAVLQLCVDRRCLVFQILH- 90
Query: 377 AEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE 436
A+ VPD L +R L P +G + D +L YG LE + ++ +
Sbjct: 91 ADYVPDAL----SRFLADPRFTFVGVGVRDDAARLRVGYG-LEVPRAVDLRALAADTLGR 145
Query: 437 P---KGGLSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
P + GL L +++G ++K R S W++R LS++Q +YA DA ++ + +
Sbjct: 146 PDLRRAGLRALVREVMGVQMDKPHHVRVSAWDKRNLSEDQFKYACADAFASREVGRRLYT 205
Query: 492 CS 493
C+
Sbjct: 206 CN 207
>gi|195580608|ref|XP_002080127.1| GD21649 [Drosophila simulans]
gi|194192136|gb|EDX05712.1| GD21649 [Drosophila simulans]
Length = 422
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 26/198 (13%)
Query: 310 ELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVF 369
+L E +I VD+ D + + H++ V+ +D EW + C N++ ++QIA+ V+
Sbjct: 201 DLPDECLIIVDKADQFDRMLYHLQQECVIYLDSEWMQSV---CGDNQLCVLQIATGHNVY 257
Query: 370 IFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYG---ELECFKHYEM 426
+ D + + I + I K+G++ D+ L S L+ HY
Sbjct: 258 LIDCLARESLRSEHWRLLGANIFNNVNIRKVGFSMVSDLSVLQRSLPLQLRLQMPHHY-- 315
Query: 427 LLDIQNVFKEPK-----------------GGLSGLAEKILGAGLNKTRRNSNWEQRPLSQ 469
LD++N++ E K L+ L+ LG LNK+ + SNW RPL +
Sbjct: 316 -LDLRNLWLELKKQRFGVELPFGNVNRAGDALTDLSLACLGKKLNKSNQCSNWANRPLRR 374
Query: 470 NQLEYAALDAVVLLQIFH 487
Q+ YAA+DA LL I++
Sbjct: 375 EQILYAAIDARCLLLIYN 392
>gi|436840612|ref|YP_007324990.1| 3'-5' exonuclease [Desulfovibrio hydrothermalis AM13 = DSM 14728]
gi|432169518|emb|CCO22886.1| 3'-5' exonuclease [Desulfovibrio hydrothermalis AM13 = DSM 14728]
Length = 198
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
I +D + + AI + CK++G D E +P + KG S++Q+A+D+ V++ L
Sbjct: 28 IKLIDNEEDVPDAIAKLSKCKLLGFDTETRPVFRKGLSYPP-SLIQLATDDCVYLLHLSH 86
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECF--KHYEMLLDIQNV 433
++ L + ++L S I+K G D+K+L ++ F K + L D+
Sbjct: 87 IS------LSDYIKKLLSSADIIKTGVAVINDVKELR----QVSPFDGKGFVDLGDLARS 136
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
+ GL LA +LG ++K + SNW ++ L+ QL YAA DA V +I+
Sbjct: 137 LEMQTNGLRNLAANLLGFRISKGVQCSNWGRKELTPQQLTYAATDAWVSREIY 189
>gi|224051280|ref|XP_002200511.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 1
[Taeniopygia guttata]
Length = 621
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 102/223 (45%), Gaps = 29/223 (13%)
Query: 300 FVHSRFLHLKELVVEDIIWV------DEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCK 353
F F ++ + DI+ V D V+ L K +E V+GIDCEW V+G K
Sbjct: 65 FRSPTFFWIERTLGADIVIVSEQEEWDHVEPLLKK--ELEKWPVLGIDCEWV--SVEG-K 119
Query: 354 MNKVSIMQIASDEMVFIFDLIKLAEDVPD--VLDSCLTRILQSPGILKLGYNFQCDIKQL 411
N VS++Q+AS + I L++L V L L I+ +LK+G D +L
Sbjct: 120 ANPVSLLQMASSSGLCI--LVRLPRLVASGQTLPKTLLDIMADSAVLKVGVGCWEDACKL 177
Query: 412 AHSYG-------ELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTR--RNSNW 462
H YG +L + + N L LAEK+L L+K+ R SNW
Sbjct: 178 LHDYGLAVKGSMDLRYLAMRQRKDLLHNCL-----SLKSLAEKVLNFPLDKSPHVRCSNW 232
Query: 463 EQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSEGHDKI 505
E L+Q+Q+ YAA DA V + +F H+ + EG + +
Sbjct: 233 EAEELTQDQVLYAARDAQVSVAVFFHLLGFTSLPATPEGENSV 275
>gi|242057157|ref|XP_002457724.1| hypothetical protein SORBIDRAFT_03g012385 [Sorghum bicolor]
gi|241929699|gb|EES02844.1| hypothetical protein SORBIDRAFT_03g012385 [Sorghum bicolor]
Length = 183
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 14/145 (9%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
+VG+DCEWKPNY + +KV+I+Q+ + + L+ + D + + + L P
Sbjct: 31 IVGLDCEWKPNY-RSWTTSKVAILQLCAGTRCLVLQLLYV-----DRVPASVRSFLADPD 84
Query: 397 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKG-----GLSGLAEKILGA 451
+L +G D+ +L YG L C H ++ + G GL G AE++LG
Sbjct: 85 VLFVGIGVGEDVAKLDADYG-LTCAAHVDLESRCNDYLGRYTGVGRRLGLKGYAEEVLGL 143
Query: 452 GLNKTR--RNSNWEQRPLSQNQLEY 474
+ K R SNWE+ L + Q+ Y
Sbjct: 144 FMEKPRGVTMSNWEKHDLEEAQIRY 168
>gi|365118495|ref|ZP_09337059.1| hypothetical protein HMPREF1033_00405 [Tannerella sp.
6_1_58FAA_CT1]
gi|363649538|gb|EHL88649.1| hypothetical protein HMPREF1033_00405 [Tannerella sp.
6_1_58FAA_CT1]
Length = 209
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 9/176 (5%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
II V + KAI ++ ++G+D E +P++ KG K + V+++QIA+++ F+F + +
Sbjct: 26 IIVVQNKQDIEKAISYLSDFPILGVDTETRPSFRKG-KSHTVALIQIATEDTCFLFRINR 84
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK 435
L + ++P I K+G + + D L H E K + L F
Sbjct: 85 TG------FTPTLKTLFENPNITKIGLSLKDDFSML-HKIAPFEP-KGFIELQSYVKQFN 136
Query: 436 EPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
L + + G ++K++R SNWE LS Q YAA DA ++I+ + +
Sbjct: 137 IEDMSLQKIYAILFGKKISKSQRLSNWEADILSDAQKRYAATDAWACVRIYKSLST 192
>gi|392571798|gb|EIW64970.1| ribonuclease H-like protein [Trametes versicolor FP-101664 SS1]
Length = 428
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
+++ D ++AI + KV+G D EWKPN++KG N V+++Q+AS ++V + +
Sbjct: 42 LVYCQNADATNEAIAQLN-SKVLGFDLEWKPNFIKGRPENPVALVQLASADLVLLIHIFH 100
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYG--ELECFKHYEMLLDIQNV 433
+ L +L ++K G Q D K+L YG C + + N
Sbjct: 101 MP-----TFPERLRDLLADEAVVKAGVGIQKDCKKLFTDYGVDTRNCVDLSLLARTVDNA 155
Query: 434 -----FKEPKGGLSGLAEKILGAGLNKTR-RNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
+ P GL+ L E L K R + SNWE PL Q +YAA D+ L ++
Sbjct: 156 RWKGKYASPI-GLARLCETYEELTLQKGRVQTSNWE-LPLDPRQQDYAANDSHAGLTLY 212
>gi|195155440|ref|XP_002018612.1| GL25861 [Drosophila persimilis]
gi|194114765|gb|EDW36808.1| GL25861 [Drosophila persimilis]
Length = 625
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 22/190 (11%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
+I VD + H++ ++ +D EW N C +++ ++QIA+ V++ D +
Sbjct: 408 LITVDTATQFDLMLGHLQREHIIYMDSEWVQNV---CGESQLCLLQIATVRNVYLIDCLA 464
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIK------------QLAHSYGELECF-- 421
D + + + ILK+G++ D+ QL+H Y +L
Sbjct: 465 RQSITADHWRALGADVFNNMNILKVGFSMYSDLTVLQRSLPLQLRLQLSHHYLDLRTLWL 524
Query: 422 ----KHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAAL 477
+ Y + L NV LS L+ LG LNK+ + SNW RPL + Q+ YAA+
Sbjct: 525 ELKKQRYAIRLPFGNV-NRAGDALSDLSLVCLGKKLNKSNQCSNWANRPLRREQILYAAI 583
Query: 478 DAVVLLQIFH 487
DA L+ I++
Sbjct: 584 DARCLMLIYN 593
>gi|393786954|ref|ZP_10375086.1| hypothetical protein HMPREF1068_01366 [Bacteroides nordii
CL02T12C05]
gi|392658189|gb|EIY51819.1| hypothetical protein HMPREF1068_01366 [Bacteroides nordii
CL02T12C05]
Length = 215
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 90/167 (53%), Gaps = 21/167 (12%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
KA+ +++ V+GID E +P++ KG + +KV+++QI+S+E F+F L L
Sbjct: 35 KAVAYLQAQSVLGIDSETRPSFTKG-QSHKVALLQISSNECCFLFRLNMTG------LTP 87
Query: 387 CLTRILQSPGILKLGYNFQCDIKQL--AHSYGELECFKHYEMLLDIQNVFKEPKGGLSGL 444
L +L++P ++K+G + + D L + + C +++Q+ + P G L
Sbjct: 88 SLIGLLENPEVIKVGLSLRDDFMMLHKRAPFTQQGC-------VELQDYVR-PFGILDKS 139
Query: 445 AEKILG----AGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
+KI G ++K++R SNWE L+ Q +YAA DA L I++
Sbjct: 140 LQKIYGILFKEKISKSQRLSNWEADVLTDAQKQYAATDAWACLHIYN 186
>gi|384249941|gb|EIE23421.1| ribonuclease H-like protein [Coccomyxa subellipsoidea C-169]
Length = 590
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 88/177 (49%), Gaps = 17/177 (9%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDL--IKLAEDVPDVLDSCLTRILQ 393
KV +DCEW PN G + + V+++ IAS V + L ++L +PD L L+
Sbjct: 352 KVFALDCEWVPNLKHG-ERHPVALLTIASASHVVLLRLCKMRLGGKLPDDL----MEFLE 406
Query: 394 SPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE------PKGGLSGLAEK 447
P + LG + D+++L +SYG K ++ L+D+Q V +E + GL L +
Sbjct: 407 HPDMQFLGTGWASDVRELEYSYGIPS--KTWDGLVDLQKVVREMFPGQDQRIGLKHLVWQ 464
Query: 448 ILGAGLNK--TRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSEGH 502
LG K +WE + L++ Q+ YA LDA+ + +IF +R + E H
Sbjct: 465 FLGFWPPKGCAITLGDWEAQWLTRAQINYAMLDALYVGEIFRCMRCLQEQWQAEEWH 521
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 79/152 (51%), Gaps = 12/152 (7%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA-EDVPDVLDSCLTRILQS 394
KV +DCEW+P+Y +G + N V+++ IAS V + L ++ D +L + L L
Sbjct: 48 KVFALDCEWRPSYRRG-ERNPVALLTIASQHHVTLIRLCRMYFRD--GLLPATLMDFLCD 104
Query: 395 PGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK----EPKGGLSGLAEKILG 450
G LG + D L +SYG + + ++ LLDIQ V K + + GL + + LG
Sbjct: 105 GGCHFLGSGWSSDSSALEYSYGVPK--ETWQGLLDIQAVSKSINPQLRVGLQSMVQHYLG 162
Query: 451 AGLNKTR--RNSNWEQRPLSQNQLEYAALDAV 480
K+ +WE + LS Q+ YAALDA+
Sbjct: 163 FRPPKSSIITMGDWEAQWLSDAQINYAALDAL 194
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 355 NKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHS 414
N+V+++ IA+ + V + L ++ D DVL L L+ G LG + D L S
Sbjct: 198 NRVALLTIATPDRVLLLRLCRMHLD-GDVLPDVLLDFLEDEGNHFLGNGWTSDSSALEFS 256
Query: 415 YGELECFKHYEMLLDIQNVFK----EPKGGLSGLAEKILGAGLNKTRRNS--NWEQRPLS 468
Y + L+DIQ++ + E + GL LG K + + +WE LS
Sbjct: 257 YDIQR--GTWNRLIDIQHIARQMNDEMRVGLKQTVRHYLGFYPPKGPQITLGDWEAFRLS 314
Query: 469 QNQLEYAALDAVVLLQI 485
+ Q+ YAALDA+ + +I
Sbjct: 315 EAQINYAALDALYVGEI 331
>gi|195475951|ref|XP_002090246.1| GE12998 [Drosophila yakuba]
gi|194176347|gb|EDW89958.1| GE12998 [Drosophila yakuba]
Length = 625
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 32/201 (15%)
Query: 310 ELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVF 369
+L E +I VD+ + + + H++ V+ +D EW + C N++ ++QIA+ V+
Sbjct: 404 DLPDECLIIVDKAEQFDRMLYHLQQECVIYLDSEWMQSV---CGDNQLCVLQIATGHNVY 460
Query: 370 IFDLI---KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHS---YGELECFKH 423
+ D + L E+ +L + I + I K+G++ D+ L S + L+ H
Sbjct: 461 LIDCLARESLCEEHWRLLGA---NIFNNVNIRKVGFSMVSDLSVLQRSLPLHLRLQMPHH 517
Query: 424 YEMLLDIQNVFKE----------PKG-------GLSGLAEKILGAGLNKTRRNSNWEQRP 466
Y LD++N++ E P G L+ L+ LG LNK+ + SNW RP
Sbjct: 518 Y---LDLRNLWLELKKQRFGVELPFGNVNRAGDALTDLSLACLGKKLNKSNQCSNWANRP 574
Query: 467 LSQNQLEYAALDAVVLLQIFH 487
L + Q+ YAA+DA LL I++
Sbjct: 575 LRREQILYAAMDARCLLLIYN 595
>gi|429726584|ref|ZP_19261371.1| 3'-5' exonuclease [Prevotella sp. oral taxon 473 str. F0040]
gi|429145890|gb|EKX88970.1| 3'-5' exonuclease [Prevotella sp. oral taxon 473 str. F0040]
Length = 205
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
II + + ++A+ + K+VGID E +P++ +G + +KV+++QIA+ ++ F+F L
Sbjct: 25 IIVIQSENEANRAVAFLRTQKIVGIDTETRPSFRRG-QQHKVALIQIATPDICFLFRLNY 83
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK 435
+ PD L ++L+ I K+G + + DI QL Y +H+ L I
Sbjct: 84 MG--FPD----SLIKLLEDTQIAKVGLSLKDDIHQLEQRYPGFSP-QHFIDLQQIATRMG 136
Query: 436 EPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
L+ L ++K + SNWE L + Q YAA DA L ++ ++
Sbjct: 137 IEDMSLAKLFANFFRQRISKNAQLSNWEADALDEKQRVYAATDASACLLLYSRMQ 191
>gi|449456993|ref|XP_004146233.1| PREDICTED: probable exonuclease mut-7 homolog [Cucumis sativus]
gi|449522385|ref|XP_004168207.1| PREDICTED: probable exonuclease mut-7 homolog [Cucumis sativus]
Length = 524
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 89/179 (49%), Gaps = 32/179 (17%)
Query: 337 VVGIDCEWKPNYV--KGCKMNKVSIMQIA--------SDEMVFIFDLIKLAEDVP-DVLD 385
++ +D EWKP + +VS++QIA +D + F+ DL+ VP +
Sbjct: 35 LIALDAEWKPLQTPDQHSSFPRVSLLQIACQFHSDHRNDSVAFLLDLLS----VPLSSIW 90
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHSYGELEC-----FKHYEMLLDIQNVF----KE 436
L + SP +LKLG+ F+ D+ L+ ++ E +DI +++ +
Sbjct: 91 HLLRDVFVSPYVLKLGFRFKQDLVYLSTTFSSYGGGGVSGLDRIEPFMDIASIYYHLQHK 150
Query: 437 PKG--------GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
KG L+ + ++LG L+K + S+W RPL++ Q+ YAA+DA LL+IF+
Sbjct: 151 QKGRKLHKQSKSLTAICSEVLGFSLSKELQCSDWSVRPLTEEQIAYAAMDAHCLLEIFN 209
>gi|156400872|ref|XP_001639016.1| predicted protein [Nematostella vectensis]
gi|156226141|gb|EDO46953.1| predicted protein [Nematostella vectensis]
Length = 485
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 82/155 (52%), Gaps = 15/155 (9%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASD-EMVFIFDLIKLAEDVPDVLDSCLTRILQS 394
K VG+DCEW KG + V+++QIA+ F+ L K++ VP L +L+
Sbjct: 2 KFVGLDCEWVNK--KGVLSHPVALLQIATPLNDCFLIRLCKMSGAVPPTLKG----LLED 55
Query: 395 PGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQN-VFKEPKGGLSGLAEKILGAGL 453
+LK G D K+L+ ++G +D+++ V ++ K L LA++ LG +
Sbjct: 56 RAVLKFGVGIMDDAKKLSDTFGLA-----VSGCVDLRHLVLRQGKLSLGALAQRFLGVRM 110
Query: 454 NKT--RRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
+K+ + SNWE LS Q+ YAA DA+V + +F
Sbjct: 111 DKSWHVQCSNWEVEHLSDRQVAYAANDAIVAVHVF 145
>gi|443310846|ref|ZP_21040485.1| DNA segregation ATPase, FtsK/SpoIIIE family [Synechocystis sp. PCC
7509]
gi|442779111|gb|ELR89365.1| DNA segregation ATPase, FtsK/SpoIIIE family [Synechocystis sp. PCC
7509]
Length = 885
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 103/199 (51%), Gaps = 29/199 (14%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCE---WKPNYVKGCKMNKVSIMQIASDEMV---- 368
+ ++ + D + K I + K++ +D E W+ K+S++Q ASD++
Sbjct: 1 MFYLTKPDEITKVIDKLALAKILWLDTETADWQ------TSKPKISLIQ-ASDDLTDTTG 53
Query: 369 ---FIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGE-LECFKHY 424
++ D++ D P+++ + +++ + I K+ +N D+K L + + C
Sbjct: 54 TKAYVLDVL----DKPELVTYFINKVMANSKIEKVFHNANYDLKFLGKDQAKNVTC--TL 107
Query: 425 EMLLDIQNVFKE----PKGGLSGLAEKILG-AGLNKTRRNSNWEQRPLSQNQLEYAALDA 479
++ +++ FKE P L LAE++ G + ++KT ++SNW QRPL+ +QLEYA LD+
Sbjct: 108 QLARKLRHSFKEVAQLPNLKLKTLAEELCGFSNVDKTEQSSNWRQRPLTNSQLEYANLDS 167
Query: 480 VVLLQIFHHVRSCSQPTDV 498
V L QI + S P +
Sbjct: 168 VYLAQIHRRLLEISNPNQI 186
>gi|356566624|ref|XP_003551530.1| PREDICTED: Werner Syndrome-like exonuclease-like [Glycine max]
Length = 220
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 27/180 (15%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
W+ DG+ + +VG+D EW+PNY + N V+ +Q+ + IF +I A
Sbjct: 45 WLPNNDGVRR-----RNNLMVGLDVEWRPNYQPNTQPNPVATLQLCTGHRCLIFQIIH-A 98
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE- 436
+P + L L +P I G + D ++L Y H + D++ + E
Sbjct: 99 PSIP----AALISFLANPNITFFGVGIRADAEKLLVDYN-----LHVANVRDLRPLAVER 149
Query: 437 ---------PKGGLSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ GL+ LA +LG + K + S W+ R L++ Q++YA +DA + +I
Sbjct: 150 LSRAFYPDVSQAGLATLARHVLGVAVEKPQWITRSRWDDRRLTKEQVQYATIDAFLSYEI 209
>gi|410028432|ref|ZP_11278268.1| ribonuclease D [Marinilabilia sp. AK2]
Length = 200
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 92/179 (51%), Gaps = 14/179 (7%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
+I+ V+ D + + + ++G D E +P++ KG + VS++Q+A++E F+ L
Sbjct: 22 EIVLVNSKDQIKEVAAELNRHSLLGFDTETRPSFRKGTQY-YVSLLQLATEETAFLIRLN 80
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF 434
++ + + + IL+ P I+K+G D++ L ++ H E D+ +
Sbjct: 81 EIG------MPAVIQEILEDPQIIKIGAAVLDDLRALR----KVAVGFHPESFFDLNDEL 130
Query: 435 KE---PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
K+ G+ LA +L ++K+ + SNWE L++ Q YAA DA V L+I+ ++
Sbjct: 131 KKVGFQNIGVRNLAAMVLNMRISKSEQVSNWEAAELTEKQQLYAATDAWVCLEIYKKLQ 189
>gi|255953481|ref|XP_002567493.1| Pc21g04470 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589204|emb|CAP95344.1| Pc21g04470 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1240
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 14/184 (7%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVK-GCKMNKVSIMQIASDEMVFIFD--LIKLAEDVPDV 383
+A+ H G KV+G D EWK + VS++QIA++E + +F L K A + D+
Sbjct: 1027 EAVQHFLGSKVIGFDMEWKAQASSLDSIQSNVSVIQIANEERIALFQIALFKPARSLEDL 1086
Query: 384 LDSCLTRILQSPGILKLGYNFQCDIKQLAHSYG-----ELECFKHYEML---LDIQNVFK 435
+ L R+++SP + K+G + + D +L G E Y+++ D N+
Sbjct: 1087 VSPSLKRLVESPDVTKVGVSIKADCTRLRKYLGIDAKATFELSHLYKLVKYGKDNPNLVN 1146
Query: 436 EPKGGLSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCS 493
+ LS + G L K+ R +W R LS Q++YAA D +++FH + +
Sbjct: 1147 KRGVNLSEQINEHFGLPLEKSDDVRCGDWT-RALSYRQVQYAATDPYACVRLFHAMEAKR 1205
Query: 494 QPTD 497
Q D
Sbjct: 1206 QAMD 1209
>gi|225450557|ref|XP_002277523.1| PREDICTED: Werner Syndrome-like exonuclease-like [Vitis vinifera]
Length = 210
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 87/178 (48%), Gaps = 20/178 (11%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
WV E+ +H VVG+D EW+P+ ++ NK + +Q+ D+ I L +
Sbjct: 43 WVREILSIHAG-----KPMVVGLDIEWRPHPIRSMS-NKSATLQLCIDDKCLILQLFYMD 96
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEML-LDIQ---NV 433
E +P+ L S L +G DI +L + YG L+C + ++ L +Q
Sbjct: 97 E-IPESLKS----FLADSNFTFVGIEVGDDIAKLKNEYG-LDCSRSADIRDLAMQRWPGR 150
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
F+ P GL LA ++ + K + SNWE R LS+NQ+EYA +DA +I H +
Sbjct: 151 FRRP--GLKDLAWEVTNLPMKKPKHVSMSNWEARVLSENQIEYACIDAYASYKIGHKL 206
>gi|167999688|ref|XP_001752549.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696449|gb|EDQ82788.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 439
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 74/153 (48%), Gaps = 12/153 (7%)
Query: 339 GIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGIL 398
G+D EW+P + KG N +++Q++ +E + L + D+L + L +L +P I
Sbjct: 251 GLDIEWRPTFQKGDYHN-AALLQLSLEECCLLVQLRFI-----DMLPASLKSLLANPNIK 304
Query: 399 KLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEP---KGGLSGLAEKILGAGLNK 455
G D K+L YG L C E+ + K K G++ L EK+LG K
Sbjct: 305 MGGVGILADTKKLKKDYG-LICAGEVELTTLAVSTLKNTSLKKSGIATLTEKVLGVPYEK 363
Query: 456 TRR--NSNWEQRPLSQNQLEYAALDAVVLLQIF 486
+R SNWE R L+ Q+ YAA DA + I
Sbjct: 364 NKRVTMSNWENRDLTYAQIHYAAADAWLSYSIM 396
>gi|395334008|gb|EJF66384.1| ribonuclease H-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 419
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 86/184 (46%), Gaps = 27/184 (14%)
Query: 303 SRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQI 362
+R ++++ + D+ AI ++ KV+G D EW+PN++KG N V+++Q+
Sbjct: 50 TRLVYIQNPITADV-----------AISQLD-SKVLGFDLEWRPNFIKGNPENPVALVQL 97
Query: 363 ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQL--AHSYGELEC 420
AS++ + + + P+ L +L P ++K G Q D K+L H C
Sbjct: 98 ASEDTILLIH-VSFMHAFPE----KLKELLLDPNVVKAGVGIQKDCKKLWIDHRVDTRNC 152
Query: 421 FKHYEMLLDIQNV-----FKEPKGGLSGLAEKILGAGLNKTR-RNSNWEQRPLSQNQLEY 474
+ + N + P GLS L E LNK + + SNWE RPL Q EY
Sbjct: 153 VDLSLLARTVDNARWKGKYANPI-GLSRLCETYEDLTLNKGKIQTSNWE-RPLDLRQQEY 210
Query: 475 AALD 478
AA D
Sbjct: 211 AAND 214
>gi|320165604|gb|EFW42503.1| hypothetical protein CAOG_07346 [Capsaspora owczarzaki ATCC 30864]
Length = 1153
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 92/222 (41%), Gaps = 47/222 (21%)
Query: 328 AICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSC 387
A H+ G VVG+D EW+P + + +++Q+A+ + + D L V L
Sbjct: 686 AYLHVPGT-VVGMDTEWRPTVMNSKGSSATALLQLATRDRTILIDTCVLRGAV---LGQF 741
Query: 388 LTRILQSPGILKLGYNFQCDIKQL----------------AHSYGELEC----------- 420
+ R+ + K+GY D+ L A + G L
Sbjct: 742 VDRLFSDAAVTKIGYAMTGDMSALQMSCTPDPPPSSATGTAGASGSLPAKIRSARKKEPR 801
Query: 421 ---FKHYEMLLDIQNV---------FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLS 468
F L+D+ + F GL+GL +L L+K ++ S+WE+RPL
Sbjct: 802 GHHFPAIRSLIDLAQLTSHAGVVAQFGVIAPGLAGLVRAVLKKTLDKRQQMSDWERRPLR 861
Query: 469 QNQLEYAALDAVVLLQIFHHVRSCSQPTDV----SEGHDKIE 506
Q+ YAALDA LL++ + + + D ++ HD+ +
Sbjct: 862 PAQVHYAALDAFCLLKLHDLMDAAMKAFDAAHPPAQSHDRAQ 903
>gi|404450237|ref|ZP_11015222.1| ribonuclease D [Indibacter alkaliphilus LW1]
gi|403764197|gb|EJZ25111.1| ribonuclease D [Indibacter alkaliphilus LW1]
Length = 200
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 96/177 (54%), Gaps = 10/177 (5%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
+II V+ + +H+A + ++G D E +P++ KG + +VS++Q+++ E+ F+F L
Sbjct: 22 EIILVETEEQIHEAAQELNRHTLIGFDTETRPSFRKGVQY-QVSLLQLSTAEVAFLFRLH 80
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV- 433
++ L S + IL++P I+K+G D++ L + +++ +++ V
Sbjct: 81 QIG------LPSSIKAILENPKIVKIGAAVLDDLRGLKKISIGFQPKSFFDLNAELKKVG 134
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
F G+ L+ +L ++K+ + SNWE L+ Q YAA DA V L+++ ++
Sbjct: 135 FHNV--GVRNLSAMVLDIRISKSEQVSNWEAPELTDKQKVYAATDAWVCLEVYKKLQ 189
>gi|393244516|gb|EJD52028.1| ribonuclease H-like protein [Auricularia delicata TFB-10046 SS5]
Length = 471
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 19/158 (12%)
Query: 338 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGI 397
+G D EW+P Y++G NKV+ +QI + + + + L VP + L ++++ +
Sbjct: 148 LGFDMEWRPTYIRGRGENKVATIQICDSQTIIVAQVSAL-RKVP----AALKKLIEDKDV 202
Query: 398 LKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEP-KGG------LSGLAEKILG 450
+K G N D ++L YG L + L+D+ + K+ KGG LS L K L
Sbjct: 203 VKCGLNIMGDGQKLLRDYGVLG-----QNLVDLGEMSKQADKGGHSGRTALSALVGKYLK 257
Query: 451 AGLNKTR-RNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
L K R S+WE R L+Q+Q+ YAA DA L++++
Sbjct: 258 HHLEKGPVRMSDWE-RYLTQDQIRYAANDAFCGLELYN 294
>gi|116309147|emb|CAH66248.1| OSIGBa0101A01.4 [Oryza sativa Indica Group]
Length = 211
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 88/182 (48%), Gaps = 19/182 (10%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNY-VKGCKMNKVSIMQIASDEMVFIFDLIKL 376
W+ E +H++ H VVG+D EW+P V G V+++Q+ D +F ++
Sbjct: 39 WLGETYRIHRSCGHP---LVVGLDVEWRPAAPVPG----PVAVLQLCVDRRCLVFQILH- 90
Query: 377 AEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE 436
A+ +PD L +R L P +G + D +L YG LE + ++ +
Sbjct: 91 ADYLPDAL----SRFLADPRYTFVGVGVRDDAARLRVGYG-LEVPRAVDLRALAADTLGR 145
Query: 437 P---KGGLSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
P + GL L +++G ++K R S W++R LS++Q +YA DA ++ + +
Sbjct: 146 PDLRRAGLRALVREVMGVQMDKPHHVRVSAWDKRNLSEDQFKYACTDAFASREVGRRLYT 205
Query: 492 CS 493
C+
Sbjct: 206 CN 207
>gi|395504159|ref|XP_003756424.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2
[Sarcophilus harrisii]
Length = 620
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 29/220 (13%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPD--VLDSCLT 389
+E C V+GIDCEW K C +S++Q+AS I L++L + + L L
Sbjct: 98 LEQCPVLGIDCEWVNIEGKACP---ISLLQMASPTGRCI--LLRLPKLISGKAALPQTLL 152
Query: 390 RILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEM--LLDIQNVFKEPK-----GGLS 442
IL+ ILK+G + D +L Y H + LD++N+ + + GLS
Sbjct: 153 DILEDSKILKVGVGCREDASKLLQDY-------HLTVRGCLDLRNLAMKQRRDLLQNGLS 205
Query: 443 --GLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDV 498
LAE IL LNK+ R SNW+ L++ Q+ YAA DA + + +F H+ C +
Sbjct: 206 LKSLAETILNFPLNKSLLLRCSNWDAEELTEEQVAYAARDAQISVALFLHLLGCPLSMNS 265
Query: 499 SEGHD-KIEWKSYIV---SHMDNPKKSKKRPTIKKETESG 534
++ D + W+ ++ +D P K +I E G
Sbjct: 266 TKNRDVETSWEKVLMKCKDLVDRPFHGKGNNSIMGEESIG 305
>gi|313674143|ref|YP_004052139.1| 3'-5' exonuclease [Marivirga tractuosa DSM 4126]
gi|312940841|gb|ADR20031.1| 3'-5' exonuclease [Marivirga tractuosa DSM 4126]
Length = 194
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 90/176 (51%), Gaps = 15/176 (8%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
+I V++ + + I + +++G D E KP + KG + N VS++Q+A++E VF+ +
Sbjct: 23 EITLVEKDEDWEEVIPKLWKAEILGFDTEAKPVFKKG-QYNPVSLIQLATEEEVFLIRNL 81
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF 434
L RI + P I+K G D+K L +L F+ E DI ++
Sbjct: 82 MCG------FHGDLVRIFEDPSIIKTGAAIHDDLKDLQ----KLRKFRP-EGFEDIGSIA 130
Query: 435 KEP---KGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
++ + G L L ++K ++ SNWE+ L+Q Q++YAA DA + L+++
Sbjct: 131 RQNGMLQSGAKNLTAIFLNKRISKAQQTSNWEKSELTQAQIDYAATDAYLGLKVYE 186
>gi|324504376|gb|ADY41890.1| Exonuclease mut-7, partial [Ascaris suum]
Length = 953
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 98/218 (44%), Gaps = 49/218 (22%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
+I +D + L + I + ++GID EWKP ++ + +V+++Q++ ++ D++K
Sbjct: 419 VIMIDTIMALRQLIEVFKTSSIIGIDTEWKPMFLS--TVEQVALLQVSIPSCSYLVDVVK 476
Query: 376 LAEDVPDV-LDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV- 433
L ++V + + + +KLG++F D++ L ++ LE M D++NV
Sbjct: 477 LEDEVSEEEWIEFFKALFCTESSIKLGFDFANDMRVLRATFPFLE-----SMQPDMKNVI 531
Query: 434 ----------------FKEPKG------------------------GLSGLAEKILGAGL 453
P G L+ L +ILG L
Sbjct: 532 CIMKLATSLMSENSASLDLPTGEAHGSDSNENTTDESPSDEQQLHFKLTDLCYRILGEPL 591
Query: 454 NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
+K + NW RPL Q++YAA+DA L++I+ +++
Sbjct: 592 DKREQIGNWAMRPLRPEQMKYAAMDAYCLIKIYDRMKA 629
>gi|4455316|emb|CAB36851.1| putative protein [Arabidopsis thaliana]
gi|7268091|emb|CAB78429.1| putative protein [Arabidopsis thaliana]
Length = 313
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 78/161 (48%), Gaps = 19/161 (11%)
Query: 334 GCKVVGIDCEWKPNYVKGCKMNKVSIMQIASD----EMVFIFDLIKLAEDVPDVLDSCLT 389
G VG+D EW+P++ KG KV+ +QI D +++ IF +P L
Sbjct: 126 GIAFVGLDIEWRPSFRKGVLPGKVATVQICVDSNYCDVMHIFH-----SGIP----QSLQ 176
Query: 390 RILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQN--VFKEPKGGLSGLAEK 447
+++ ++K+G D +L H YG K E L D+ N + + K GL+ L E
Sbjct: 177 HLIEDSTLVKVGIGIDGDSVKLFHDYG--VSIKDVEDLSDLANQKIGGDKKWGLASLTET 234
Query: 448 ILGAGLNKTRRN--SNWEQRPLSQNQLEYAALDAVVLLQIF 486
++ L K R NWE PLS+ QL+YAA DA ++
Sbjct: 235 LVCKELLKPNRIRLGNWEFYPLSKQQLQYAATDAYASWHLY 275
>gi|42572893|ref|NP_974543.1| Werner Syndrome-like exonuclease [Arabidopsis thaliana]
gi|75327902|sp|Q84LH3.1|WEX_ARATH RecName: Full=Werner Syndrome-like exonuclease
gi|28195109|gb|AAO33765.1| Werner Syndrome-like exonuclease [Arabidopsis thaliana]
gi|38603882|gb|AAR24686.1| At4g13870 [Arabidopsis thaliana]
gi|332657939|gb|AEE83339.1| Werner Syndrome-like exonuclease [Arabidopsis thaliana]
Length = 288
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 78/161 (48%), Gaps = 19/161 (11%)
Query: 334 GCKVVGIDCEWKPNYVKGCKMNKVSIMQIASD----EMVFIFDLIKLAEDVPDVLDSCLT 389
G VG+D EW+P++ KG KV+ +QI D +++ IF +P L
Sbjct: 126 GIAFVGLDIEWRPSFRKGVLPGKVATVQICVDSNYCDVMHIFH-----SGIP----QSLQ 176
Query: 390 RILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQN--VFKEPKGGLSGLAEK 447
+++ ++K+G D +L H YG K E L D+ N + + K GL+ L E
Sbjct: 177 HLIEDSTLVKVGIGIDGDSVKLFHDYG--VSIKDVEDLSDLANQKIGGDKKWGLASLTET 234
Query: 448 ILGAGLNKTRRN--SNWEQRPLSQNQLEYAALDAVVLLQIF 486
++ L K R NWE PLS+ QL+YAA DA ++
Sbjct: 235 LVCKELLKPNRIRLGNWEFYPLSKQQLQYAATDAYASWHLY 275
>gi|30682626|ref|NP_193123.2| Werner Syndrome-like exonuclease [Arabidopsis thaliana]
gi|11121455|emb|CAC14871.1| exonuclease [Arabidopsis thaliana]
gi|332657938|gb|AEE83338.1| Werner Syndrome-like exonuclease [Arabidopsis thaliana]
Length = 285
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 78/161 (48%), Gaps = 19/161 (11%)
Query: 334 GCKVVGIDCEWKPNYVKGCKMNKVSIMQIASD----EMVFIFDLIKLAEDVPDVLDSCLT 389
G VG+D EW+P++ KG KV+ +QI D +++ IF +P L
Sbjct: 126 GIAFVGLDIEWRPSFRKGVLPGKVATVQICVDSNYCDVMHIFH-----SGIP----QSLQ 176
Query: 390 RILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQN--VFKEPKGGLSGLAEK 447
+++ ++K+G D +L H YG K E L D+ N + + K GL+ L E
Sbjct: 177 HLIEDSTLVKVGIGIDGDSVKLFHDYG--VSIKDVEDLSDLANQKIGGDKKWGLASLTET 234
Query: 448 ILGAGLNKTRRN--SNWEQRPLSQNQLEYAALDAVVLLQIF 486
++ L K R NWE PLS+ QL+YAA DA ++
Sbjct: 235 LVCKELLKPNRIRLGNWEFYPLSKQQLQYAATDAYASWHLY 275
>gi|308809271|ref|XP_003081945.1| Werner Syndrome-like exonuclease (ISS) [Ostreococcus tauri]
gi|116060412|emb|CAL55748.1| Werner Syndrome-like exonuclease (ISS) [Ostreococcus tauri]
Length = 455
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 7/155 (4%)
Query: 339 GIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGIL 398
G D EW+ + KG +K S++QIA+ ++ LA L R +
Sbjct: 115 GFDMEWRVTFKKGAGESKTSLVQIAAASADLKRKVVVLARIHTAGLTRAFKRWCRDSSRG 174
Query: 399 KLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF-----KEPKGGLSGLAEKILGAGL 453
K G+N + D ++LA +G +E + E+ F P L+ L E +LG L
Sbjct: 175 KTGFNARGDARKLARDHG-VEISRVIELNALAAERFPGGCPSAPSWSLARLCEHVLGKTL 233
Query: 454 NKTR-RNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
K + R SNWE+ L++NQ++YAA+DA L ++
Sbjct: 234 PKDKTRMSNWEREKLNENQIKYAAMDAWASLMVYR 268
>gi|145521320|ref|XP_001446515.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413993|emb|CAK79118.1| unnamed protein product [Paramecium tetraurelia]
Length = 513
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 109/217 (50%), Gaps = 23/217 (10%)
Query: 290 FLKTR-EPEAGFVHSR---FLHLKELVVED--IIWVDEVDGLH-KAICHIEGCKVVGIDC 342
FLK +P F+ +LH K+ + I+ VD++D + A I VG DC
Sbjct: 287 FLKDEFKPAEEFISDEIGVYLHCKDFGYPENHIVIVDKIDQNYLDAWKCINQSNAVGYDC 346
Query: 343 E----WKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGIL 398
E W +G K V ++QIA+ VF+FD KL E + ++++L++ IL
Sbjct: 347 EHITPWTKLDYQGFK---VCLVQIATSNHVFLFDYQKLKE--FQEFKNDVSQLLENVEIL 401
Query: 399 KLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK----EPK-GGLSGLAEKILGAGL 453
K+G + + D+K +Y +L ++++ FK +PK L+ ++E L
Sbjct: 402 KIGLSLKDDLKHTV-NYLKLNNI-IIRSIIELSTCFKVLEGDPKLRSLAYISEFYFKKKL 459
Query: 454 NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
+K SNWE RPL + Q+ YAALDA+ LQ+F ++
Sbjct: 460 SKYDTCSNWEYRPLRKAQIHYAALDAIASLQVFQTMK 496
>gi|326498999|dbj|BAK05990.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 212
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 85/173 (49%), Gaps = 16/173 (9%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
W+ ++ +++ + H +VG+D EW+P++ G N V+++Q+ IF L+
Sbjct: 31 WLRQIRYVYRWVYH---KLIVGLDVEWRPSF--GRAQNPVALLQLCVGRRCLIFQLLH-- 83
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEP 437
D + L R L P +G Q D+ +L +G LE ++ + + P
Sbjct: 84 ---ADFIPLALRRFLADPDFRFVGVGVQNDVDRLNDDHG-LEVANVVDLRSLAADEMRRP 139
Query: 438 ---KGGLSGLAEKILGAGLNKTRRNS--NWEQRPLSQNQLEYAALDAVVLLQI 485
+ GL +A ++GA L+K RR + W+ LSQ Q++YA +DA V ++
Sbjct: 140 WLRQAGLKDVAGVVMGANLHKPRRVTMGPWDACRLSQEQIQYACIDAFVSFEV 192
>gi|406998744|gb|EKE16630.1| 3'-5' exonuclease [uncultured bacterium]
Length = 203
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 19/166 (11%)
Query: 328 AICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSC 387
A+ + +G D E KP ++KG ++Q+A+D ++F + +L E
Sbjct: 39 ALSALLAVDAIGFDTESKPTFLKGEASTGPHLVQLATDSQAYLFPISRLFE------TKA 92
Query: 388 LTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEK 447
L IL+SP +LK+G+ D L G C +LD+ + P G + K
Sbjct: 93 LKTILESPAVLKIGFGLGNDHSVLKSRLGIAAC-----NVLDLGEKLRGP-GHRGTVGAK 146
Query: 448 I-----LGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIF 486
+ G L K+++ SNW LS+ QL YAA DA V L+++
Sbjct: 147 VAVAHFFGQKLQKSKKIGTSNWANARLSERQLLYAANDAHVALKLY 192
>gi|333383430|ref|ZP_08475090.1| hypothetical protein HMPREF9455_03256 [Dysgonomonas gadei ATCC
BAA-286]
gi|332827669|gb|EGK00408.1| hypothetical protein HMPREF9455_03256 [Dysgonomonas gadei ATCC
BAA-286]
Length = 181
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 88/182 (48%), Gaps = 10/182 (5%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
II V KA +++ +G D E +P + KG +++++MQ+++D+ F+F L
Sbjct: 8 IIVVQSESEAEKAAAYLKKQTAIGFDTETRPAFRKGVS-HQIALMQLSTDDTCFLFRLNI 66
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK 435
+ +PD CL IL +P I K+G + + D + E+ ++N
Sbjct: 67 IG--LPD----CLAEILVNPAIKKIGLSLKDDFSAIHKRNAAFVPSNFIELQSFVKNYGI 120
Query: 436 EPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHH--VRSCS 493
E GL + + ++K +R SNWE LS Q YAA+DA L+I++ VR +
Sbjct: 121 E-DNGLQRIYGILFEKRISKGQRLSNWEADVLSDAQKMYAAIDAWACLKIYNELKVREKT 179
Query: 494 QP 495
P
Sbjct: 180 AP 181
>gi|302831237|ref|XP_002947184.1| hypothetical protein VOLCADRAFT_87286 [Volvox carteri f.
nagariensis]
gi|300267591|gb|EFJ51774.1| hypothetical protein VOLCADRAFT_87286 [Volvox carteri f.
nagariensis]
Length = 847
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 86/162 (53%), Gaps = 15/162 (9%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
+++ ID EW+P V G +++ V+++Q++S + + + D+P L S L+ P
Sbjct: 622 RLIAIDLEWRPETVSG-RVSPVALLQLSSASVCVVVRTCCMGYDLPPALRS----FLKDP 676
Query: 396 GILKLGYNF-QCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKG----GLSGLAEKILG 450
+ LG+ + D ++ ++G + LD+Q V G GLS L++ +LG
Sbjct: 677 AHVLLGFGWDSADELKMQGTFGIGR--ADFRRFLDLQEVAAS-LGYHGFGLSRLSQLVLG 733
Query: 451 AGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
L+K++ SNW L+ +QL+YA+LD +V Q+F +R
Sbjct: 734 LPLHKSKAISRSNWAAPQLTSHQLKYASLDVLVAGQLFRALR 775
>gi|431798163|ref|YP_007225067.1| ribonuclease D [Echinicola vietnamensis DSM 17526]
gi|430788928|gb|AGA79057.1| ribonuclease D [Echinicola vietnamensis DSM 17526]
Length = 203
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 92/182 (50%), Gaps = 18/182 (9%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
DI+ +++ + +A+ ++ +G D E +P++ KG + VS++Q+++ E F+F L
Sbjct: 22 DIVLIEDEKLVPEAVAELKKYSKIGFDTETRPSFKKGVHHD-VSLLQLSTPERAFLFRLN 80
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIK---QLAHSYGELECFKHYEML--LD 429
+ + + +L+ P +K+G + DIK +L S+ + F E L +
Sbjct: 81 HVG------FPTSVRSLLEDPNQVKIGAAVRDDIKALKKLEPSFRQASFFDLNEELKKVG 134
Query: 430 IQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
NV G+ L+ +L ++K+ + SNWE L+ Q YAA DA L++F+ +
Sbjct: 135 FHNV------GVRNLSAMVLNIRISKSEQVSNWEAEELTPKQQLYAATDAWACLEVFNEL 188
Query: 490 RS 491
S
Sbjct: 189 YS 190
>gi|441500572|ref|ZP_20982729.1| 3'- 5' exonuclease domain protein [Fulvivirga imtechensis AK7]
gi|441435723|gb|ELR69110.1| 3'- 5' exonuclease domain protein [Fulvivirga imtechensis AK7]
Length = 196
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 91/176 (51%), Gaps = 24/176 (13%)
Query: 320 DEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAED 379
+++ G+ K I G K VG D E KP + KG ++N+VS++QIA+++ V++ +
Sbjct: 30 EQIPGILKKIA---GEKAVGFDTETKPAFKKG-QVNEVSLVQIATEKEVYLIRINFTG-- 83
Query: 380 VPDVLDSCLTRILQSPGILKLGYNFQ---CDIKQLAHSYGELECFKHYEMLLDIQNVFKE 436
L L R L+ LK+G + D+K+L H H + +++ + K
Sbjct: 84 ----LTKELIRFLEDEKHLKIGVALRDDLIDLKKLTHF--------HPQGFIELNKLVKG 131
Query: 437 ---PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
GL L ILG ++K+ + SNWE L++ Q+ YAA DA V L++++ +
Sbjct: 132 IGIESNGLRKLTAIILGFRISKSAQISNWESEMLTEKQVNYAATDAWVCLKMYNEL 187
>gi|425766974|gb|EKV05562.1| hypothetical protein PDIP_82420 [Penicillium digitatum Pd1]
gi|425780125|gb|EKV18143.1| hypothetical protein PDIG_10910 [Penicillium digitatum PHI26]
Length = 630
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 32/183 (17%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVK-GCKMNKVSIMQIASDEMVFIFD--LIKLAEDVPDV 383
+A+ H G KV+G D EWK + VS++QIA++E + +F L K A + D+
Sbjct: 417 EAVQHFLGSKVIGFDMEWKAQASGWDSIQSNVSVIQIANEERIALFQIALFKPARSLEDL 476
Query: 384 LDSCLTRILQSPGILKLGYNFQCDIK--------------QLAHSYGELECFKHYEMLLD 429
+ L R+++SP I+K+G + + D +L+H Y ++ K L++
Sbjct: 477 VSPSLKRLVESPDIMKVGVSIKADCTRLRKYLGIDAKATFELSHLYKLIKYGKDNPKLVN 536
Query: 430 IQNVFKEPKGGLSGLAEKI---LGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQ 484
+ V L+E+I G L K+ R +W R LS Q++YAA D ++
Sbjct: 537 KRGV---------NLSEQIKEHFGLPLEKSDDVRCGDWT-RALSYRQVQYAATDPYACVR 586
Query: 485 IFH 487
+FH
Sbjct: 587 LFH 589
>gi|359406866|ref|ZP_09199511.1| 3'-5' exonuclease [Prevotella stercorea DSM 18206]
gi|357554666|gb|EHJ36378.1| 3'-5' exonuclease [Prevotella stercorea DSM 18206]
Length = 206
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 89/163 (54%), Gaps = 9/163 (5%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
+A+ ++ C V+G+D E +P + +G + +KV+++Q+A+ + F+F L + +PD
Sbjct: 36 RAVDYLLTCDVLGVDTETRPAFRRG-QNHKVALLQVATHDQCFLFRLNHIG--LPD---- 88
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAE 446
L R+L + + +G ++ D+ L H E E ++ I N+ E K L L
Sbjct: 89 SLVRLLSNKLVPMIGLSWHDDLLSL-HRRREFEPGWFIDIQDIIGNIGVEDKS-LQKLYA 146
Query: 447 KILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
+ G ++K +R +NWE L+ Q EYAA+DA +++++ +
Sbjct: 147 NLFGEKISKRQRLTNWEADVLTDKQKEYAAIDAWACIKLYNEI 189
>gi|414589140|tpg|DAA39711.1| TPA: hypothetical protein ZEAMMB73_184842 [Zea mays]
Length = 618
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 92/203 (45%), Gaps = 59/203 (29%)
Query: 337 VVGIDCEWKPNYVKGC------------------------KMNKVSIMQIA---SDEM-- 367
VV +D EWKP +G K V+++Q+A SD
Sbjct: 149 VVALDAEWKPRR-RGSPAAADPAALGDDTTPASETSPAPPKFPTVTLLQVACRFSDGGGG 207
Query: 368 ------VFIFDL--IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY-GEL 418
VF+ DL + LA+ L + L + + P LKLG+ F+ D+ L+ ++ L
Sbjct: 208 EGERSEVFVVDLLSVPLAD-----LWAPLRELFERPETLKLGFRFKQDLVYLSSTFSAAL 262
Query: 419 EC---FKHYEMLLDIQNVFKEPKG------------GLSGLAEKILGAGLNKTRRNSNWE 463
C F E LD+ N++ KG L+ + E++LG L+K + S+W
Sbjct: 263 GCDSGFDRVEPFLDVTNIYYYLKGHDRQKKLPKETKSLATICEELLGILLSKELQCSDWS 322
Query: 464 QRPLSQNQLEYAALDAVVLLQIF 486
RPLS+ Q++YAA DA LL IF
Sbjct: 323 CRPLSEGQIQYAASDAYYLLDIF 345
>gi|145352247|ref|XP_001420464.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580698|gb|ABO98757.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 389
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Query: 339 GIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGIL 398
G D EWK ++ +G +K S++QIA L+ LA L R +
Sbjct: 43 GFDMEWKVSFKRGAGESKTSLVQIAVANEDLSEKLVVLARIHTAGLTRRFKRWTRDGARG 102
Query: 399 KLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK-----EPKGGLSGLAEKILGAGL 453
K G+N + D ++L YG LE + E+ + + F+ P L+ L E +LG L
Sbjct: 103 KTGFNVRGDARKLVRDYG-LEPSRVIELSVLAKERFEGGCPSAPSWSLARLCEHVLGKTL 161
Query: 454 NKTR-RNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
K + R SNWE+ L+++Q++YAA+DA L ++
Sbjct: 162 PKDKTRMSNWEREELNESQIKYAAMDAWASLLVYR 196
>gi|340351101|ref|ZP_08674069.1| hypothetical protein HMPREF9419_2302 [Prevotella nigrescens ATCC
33563]
gi|339606719|gb|EGQ11686.1| hypothetical protein HMPREF9419_2302 [Prevotella nigrescens ATCC
33563]
Length = 227
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
KA+ + ++GID E +P + KG + +KV+++Q+++ ++ F+F L + +
Sbjct: 36 QKAVDFLLSADILGIDSETRPVFKKG-QHHKVALLQVSTKDVCFLFRLNLIG------MP 88
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLA 445
SC+ R+L+ ILK+G + D L H + + + +D+QN+ E G+ L+
Sbjct: 89 SCIVRLLEDTTILKVGLSLHDDFMML-HQRRDFKIGR----FIDLQNMVSE--FGIEDLS 141
Query: 446 EKILGAGL-----NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
+ L A L K ++ SNWE L++ Q YAA DA +QI+ ++
Sbjct: 142 LQKLYANLFHERITKRQQLSNWEAPILTEQQKIYAATDAWTCIQIYERLQ 191
>gi|20129683|ref|NP_610094.1| nibbler [Drosophila melanogaster]
gi|75027007|sp|Q9VIF1.1|MUT7_DROME RecName: Full=Probable exonuclease mut-7 homolog; AltName:
Full=Exonuclease 3'-5' domain-containing protein 3
homolog
gi|7298759|gb|AAF53970.1| nibbler [Drosophila melanogaster]
gi|356461056|gb|AET07634.1| RE72821p1 [Drosophila melanogaster]
Length = 625
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 26/198 (13%)
Query: 310 ELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVF 369
+L E +I V++ D + + H++ V+ +D EW + C N++ ++QIA+ V+
Sbjct: 404 DLPDECLIIVNKADEFDRMLYHLQQECVIYLDSEWMQSV---CGDNQLCVLQIATGHNVY 460
Query: 370 IFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYG---ELECFKHYEM 426
+ D + + I + I K+G++ D+ L S L+ HY
Sbjct: 461 LIDCLARESLRSEHWRLLGANIFNNVNIRKVGFSMVSDLSVLQRSLPLQLRLQMPHHY-- 518
Query: 427 LLDIQNVFKEPK-----------------GGLSGLAEKILGAGLNKTRRNSNWEQRPLSQ 469
LD++N++ E K L+ L+ LG LNK+ + SNW RPL +
Sbjct: 519 -LDLRNLWLELKKQRFGVELPFGNVNRAGDALTDLSLACLGKKLNKSNQCSNWANRPLRR 577
Query: 470 NQLEYAALDAVVLLQIFH 487
Q+ YAA+DA L+ I++
Sbjct: 578 EQILYAAIDARCLMLIYN 595
>gi|294940026|ref|XP_002782641.1| hypothetical protein Pmar_PMAR021190 [Perkinsus marinus ATCC 50983]
gi|239894493|gb|EER14436.1| hypothetical protein Pmar_PMAR021190 [Perkinsus marinus ATCC 50983]
Length = 1103
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 123/292 (42%), Gaps = 53/292 (18%)
Query: 236 PILLKRLAEKACWDIAEAKTKGDKRLLEYLVYLAMEAGYSEKVDELCERYSLEGFLKTRE 295
P++++++ C+D+ +K +K + Y+ + Y + LC++ + + +K +
Sbjct: 834 PMVIQKVCR--CFDVEPSKVSIEKAVERYVAARGEDTAYIAGLRLLCQQCNSDAHMKAAQ 891
Query: 296 ----------PEAGF-----VHSRFLHLKELVVED-----------IIWVDEVDGLHKAI 329
P G H H + +V + WV L +
Sbjct: 892 ERPDQAQLWNPVKGANSRIASHHSPTHFEPIVRGQMPLVMLSSEVPVKWVSSEMELDDCV 951
Query: 330 CHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLT 389
I + +GID EW ++ Q+AS++ V++ D++ L S L
Sbjct: 952 RDISQYRTIGIDVEWSSG-------PGAALFQVASEDTVYLIDMLVPEIRQSSTLFSTLR 1004
Query: 390 RILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKIL 449
R+ + LG++ D++++ EC ++D+Q + +G L L
Sbjct: 1005 RVRRV-----LGFSISADLERIPQLK---ECG-----VIDVQ---VDKRGSLQRHVAGQL 1048
Query: 450 GAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSEG 501
GA L+KT + S W RPLS++Q YAALDA LL + H+R P D + G
Sbjct: 1049 GAYLDKTEQCSEWADRPLSESQKNYAALDAYTLLALDAHIRGV--PDDGALG 1098
>gi|21428342|gb|AAM49831.1| GM01690p [Drosophila melanogaster]
Length = 625
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 26/198 (13%)
Query: 310 ELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVF 369
+L E +I V++ D + + H++ V+ +D EW + C N++ ++QIA+ V+
Sbjct: 404 DLPDECLIIVNKADEFDRMLYHLQQECVIYLDSEWMQSV---CGDNQLCVLQIATGHNVY 460
Query: 370 IFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYG---ELECFKHYEM 426
+ D + + I + I K+G++ D+ L S L+ HY
Sbjct: 461 LIDCLARESLRSEHWRLLGANIFNNVNIRKVGFSMVSDLSVLQRSLPLQLRLQMPHHY-- 518
Query: 427 LLDIQNVFKEPK-----------------GGLSGLAEKILGAGLNKTRRNSNWEQRPLSQ 469
LD++N++ E K L+ L+ LG LNK+ + SNW RPL +
Sbjct: 519 -LDLRNLWLELKKQRFGVELPFGNVNRAGDALTDLSLACLGKKLNKSNQCSNWANRPLRR 577
Query: 470 NQLEYAALDAVVLLQIFH 487
Q+ YAA+DA L+ I++
Sbjct: 578 EQILYAAIDARCLMLIYN 595
>gi|445120102|ref|ZP_21379244.1| hypothetical protein HMPREF0662_02319 [Prevotella nigrescens F0103]
gi|444839362|gb|ELX66433.1| hypothetical protein HMPREF0662_02319 [Prevotella nigrescens F0103]
Length = 227
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
KA+ + ++GID E +P + KG + +KV+++Q+++ ++ F+F L + +
Sbjct: 36 QKAVDFLLSADILGIDSETRPVFKKG-QHHKVALLQVSTKDVCFLFRLNLIG------MP 88
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLA 445
SC+ R+L+ ILK+G + D L H + + + +D+QN+ E G+ L+
Sbjct: 89 SCIVRLLEDTTILKVGLSLHDDFMML-HQRRDFKIGR----FIDLQNMVSE--FGIEDLS 141
Query: 446 EKILGAGL-----NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
+ L A L K ++ SNWE L++ Q YAA DA +QI+ ++
Sbjct: 142 LQKLYANLFHERITKRQQLSNWEAPILTEQQKIYAATDAWTCIQIYERLQ 191
>gi|299473101|emb|CBN77494.1| 3\'-5\' exonuclease family protein [Ectocarpus siliculosus]
Length = 192
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 90/182 (49%), Gaps = 20/182 (10%)
Query: 338 VGIDCEWKPNYVKGCKMNKVSIMQIAS-----DEMVFIFDLIKLAEDV--PDVLDSCLTR 390
+ ID E +P++ G + + S++Q+A+ +E V + DL+ L + + P+ L L+
Sbjct: 1 MSIDTETQPSFAVG-EWHPTSLLQVATRDADGEEDVLVIDLLSLKDGLLLPESLSEALSG 59
Query: 391 ILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGG---------- 440
SP ++KLG D+ +++ ++ E + +L++ + + GG
Sbjct: 60 PFGSPNVVKLGVGLANDLDEMSFAFEETPFLEQVPGVLNLNALNTKLTGGACNDQGIPRD 119
Query: 441 --LSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDV 498
L LA LG L+K ++ S W +RPL Q+ YAA DA+V L++F + DV
Sbjct: 120 LGLRKLASMYLGRSLSKRQQMSRWARRPLQSAQVNYAACDALVALRVFDALLLALGSLDV 179
Query: 499 SE 500
E
Sbjct: 180 GE 181
>gi|168037523|ref|XP_001771253.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677494|gb|EDQ63964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 188
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 79/151 (52%), Gaps = 12/151 (7%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
KV G+D EW+P++ KG + +K++++QI ++ I ++ L D + + L L+ P
Sbjct: 35 KVFGLDAEWRPSFRKGVE-HKIALLQICGEDDCLIVQMLYL-----DSIPTELVNFLKDP 88
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPK---GGLSGLAEKILGAG 452
I G + D +L +G LEC ++ +V P+ GL LA+ ++
Sbjct: 89 SIKFPGVGIKGDALKLKRDWG-LECNGAIDLTTLAASVLGRPELKAAGLKSLAKVVMDYD 147
Query: 453 LNKTRR--NSNWEQRPLSQNQLEYAALDAVV 481
+ K +R SNW + L + Q+EYA+LDA V
Sbjct: 148 MAKPKRVTMSNWAKPILDKVQVEYASLDAWV 178
>gi|150006113|ref|YP_001300857.1| hypothetical protein BVU_3624 [Bacteroides vulgatus ATCC 8482]
gi|149934537|gb|ABR41235.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
Length = 216
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 8/162 (4%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
KA+ +++ ++VG+D E +P++ +G +KV+++QI++ + F+F L ++ +PD L
Sbjct: 35 EKAVAYLKDQRIVGVDTETRPSFKRGT-THKVALLQISTQDTCFLFRLNRIG--MPDSLQ 91
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLA 445
L LK+G + + D L ++ L D F L +
Sbjct: 92 EFLM-----SNTLKIGLSLKDDFNSLRKREDVHPDRGNWIELQDYVGRFGIADRSLQKIF 146
Query: 446 EKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
+ G ++K++R SNWE LS+ Q YAA DA ++I++
Sbjct: 147 ANLFGQKISKSQRLSNWEAEVLSEGQKLYAATDAWACVEIYN 188
>gi|356567868|ref|XP_003552137.1| PREDICTED: Werner Syndrome-like exonuclease-like [Glycine max]
Length = 292
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 78/178 (43%), Gaps = 19/178 (10%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASD-EMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
+G D EWKP + KG KV++MQI D + LI + L +L+ P
Sbjct: 121 AIGFDIEWKPTFRKGVPPGKVAVMQICGDTRHCHVLHLIHSG------IPQNLQLLLEDP 174
Query: 396 GILKLGYNFQCDIKQLAHSY-----GELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILG 450
+LK+G D ++ Y G + H Q + + K GL+ L EK+L
Sbjct: 175 TVLKVGAGIDGDAVKVFRDYNISVKGVTDLSFHAN-----QKLGGDHKWGLASLTEKLLS 229
Query: 451 AGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSEGHDKIE 506
L K R NWE LS+ QLEYAA DA ++ ++ V++ +++
Sbjct: 230 KQLKKPNKIRLGNWEAPVLSKEQLEYAATDAFASWCLYQAIKDLPDAQKVTDRSGQVD 287
>gi|300727989|ref|ZP_07061367.1| 3- 5 exonuclease domain protein [Prevotella bryantii B14]
gi|299774831|gb|EFI71445.1| 3- 5 exonuclease domain protein [Prevotella bryantii B14]
Length = 229
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 88/169 (52%), Gaps = 19/169 (11%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
KA+ ++ ++G D E +P + +G K NKVS++Q+ + E+ F+F L + L
Sbjct: 37 KAVNYLLDSDILGFDTETRPVFRRG-KQNKVSLLQVCNREICFLFRLNRTG------LTP 89
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAE 446
+ R+L+ + K+G ++ D+ L H G+ E E+ QN+ PK G+ +
Sbjct: 90 AIIRLLEDTRVTKIGLSWHDDLLGL-HKLGDFEAGSFVEL----QNL--APKIGIEDKSL 142
Query: 447 KILGAGL-----NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
+ + A L +K++R +NWE L +Q YAA DA +QI+ ++
Sbjct: 143 QKIYANLFHQKISKSQRLTNWEADVLKDSQKLYAATDAWTCIQIYDELQ 191
>gi|255015322|ref|ZP_05287448.1| hypothetical protein B2_15541 [Bacteroides sp. 2_1_7]
gi|410104298|ref|ZP_11299211.1| hypothetical protein HMPREF0999_02983 [Parabacteroides sp. D25]
gi|409234107|gb|EKN26937.1| hypothetical protein HMPREF0999_02983 [Parabacteroides sp. D25]
Length = 193
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 87/166 (52%), Gaps = 19/166 (11%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
KA+ ++ +VG D E +P++ KG + K+S+MQI++D+ F+F L + +P+ L+
Sbjct: 37 KAVEYLLRFPIVGFDTETRPSFKKGQRY-KISLMQISTDDTCFLFRLNHIG--IPESLE- 92
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYE--MLLDIQNV---FKEPKGGL 441
+ L+S LK+G + + D +G + E LD+QN F L
Sbjct: 93 ---KFLKSSSTLKIGLSLRDD-------FGAIRKRSDIEPANFLDLQNYVGQFGIEDASL 142
Query: 442 SGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
+ + ++K +R +NWE L+ +Q +YAALDA L+I++
Sbjct: 143 QKIYAILFQKKISKGQRLTNWEADVLTDSQKKYAALDAWACLRIYN 188
>gi|118387584|ref|XP_001026896.1| 3'-5' exonuclease family protein [Tetrahymena thermophila]
gi|89308663|gb|EAS06651.1| 3'-5' exonuclease family protein [Tetrahymena thermophila SB210]
Length = 567
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 7/157 (4%)
Query: 332 IEGCKVVGIDCEWKPNYVK-GCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTR 390
+E K +G+D E++P K ++++Q+A+ F+FD + L + L
Sbjct: 399 LESAKQIGLDGEFRPAVTKLDNNSQSLALLQLATQNYCFLFDPMALKNEKEYEL--LQQN 456
Query: 391 ILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILG 450
I Q+P ILK+G+ DI +A FK L + V K P+ S L+
Sbjct: 457 IFQNPNILKIGHTISGDISMVASQLNGQLNFKGSLDLAKLHKV-KNPEQKQSSLS---FI 512
Query: 451 AGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
A + SNW QRPL + Q+ Y ALDA + + +++
Sbjct: 513 AKFQLGEQTSNWSQRPLREAQIHYGALDAYISIALYN 549
>gi|150007050|ref|YP_001301793.1| hypothetical protein BDI_0393 [Parabacteroides distasonis ATCC
8503]
gi|256840209|ref|ZP_05545717.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|262381047|ref|ZP_06074185.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|298377471|ref|ZP_06987423.1| 3'-5' exonuclease domain protein [Bacteroides sp. 3_1_19]
gi|301311285|ref|ZP_07217213.1| 3'-5' exonuclease domain protein [Bacteroides sp. 20_3]
gi|423331015|ref|ZP_17308799.1| hypothetical protein HMPREF1075_00812 [Parabacteroides distasonis
CL03T12C09]
gi|423338251|ref|ZP_17315994.1| hypothetical protein HMPREF1059_01919 [Parabacteroides distasonis
CL09T03C24]
gi|149935474|gb|ABR42171.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
8503]
gi|256737481|gb|EEU50807.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|262296224|gb|EEY84154.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|298265490|gb|EFI07151.1| 3'-5' exonuclease domain protein [Bacteroides sp. 3_1_19]
gi|300830859|gb|EFK61501.1| 3'-5' exonuclease domain protein [Bacteroides sp. 20_3]
gi|409231323|gb|EKN24177.1| hypothetical protein HMPREF1075_00812 [Parabacteroides distasonis
CL03T12C09]
gi|409234995|gb|EKN27818.1| hypothetical protein HMPREF1059_01919 [Parabacteroides distasonis
CL09T03C24]
Length = 193
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 87/166 (52%), Gaps = 19/166 (11%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
KA+ ++ +VG D E +P++ KG + K+S+MQI++D+ F+F L + +P+ L+
Sbjct: 37 KAVEYLLRFPIVGFDTETRPSFKKGQRY-KISLMQISTDDTCFLFRLNHIG--IPESLE- 92
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYE--MLLDIQNV---FKEPKGGL 441
+ L+S LK+G + + D +G + E LD+QN F L
Sbjct: 93 ---KFLKSSSTLKIGLSLRDD-------FGAIRKRSDIEPANFLDLQNYVGQFGIEDASL 142
Query: 442 SGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
+ + ++K +R +NWE L+ +Q +YAALDA L+I++
Sbjct: 143 QKIYAILFQKKISKGQRLTNWEADVLTDSQKKYAALDAWACLRIYN 188
>gi|321455674|gb|EFX66801.1| hypothetical protein DAPPUDRAFT_331718 [Daphnia pulex]
Length = 224
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 31/185 (16%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVP-DVLDS--CLTRILQ 393
VVG+D EW P + K +++QIA+ + +F+ D+ L ED V++S + +
Sbjct: 16 VVGVDIEWPPF----GTLAKATVLQIATHDKIFLLDIFSLREDKSCSVINSQQLIGDLFG 71
Query: 394 SPGILKLGYNFQCDIKQLAHSY-GELECFKHYEMLLDIQNVFKEPKGGL-SGLAEKILGA 451
+ ILKLGY + D+ L+ S G + K +DI+N++ + S L +L
Sbjct: 72 NRHILKLGYGLKEDLHVLSRSLPGIGDVSKSIVNWIDIKNLWSNIETKYPSFLPPAVLND 131
Query: 452 G----------------------LNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
G L+K + S+W++RPL +Q YAALDA LL+++ ++
Sbjct: 132 GDTCSQETHKGLSGLVKLLLGLPLDKKEQFSDWQKRPLRTSQFIYAALDAFCLLEVYDYL 191
Query: 490 RSCSQ 494
+ SQ
Sbjct: 192 QKRSQ 196
>gi|294955496|ref|XP_002788534.1| hypothetical protein Pmar_PMAR010065 [Perkinsus marinus ATCC 50983]
gi|239904075|gb|EER20330.1| hypothetical protein Pmar_PMAR010065 [Perkinsus marinus ATCC 50983]
Length = 663
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 124/292 (42%), Gaps = 53/292 (18%)
Query: 236 PILLKRLAEKACWDIAEAKTKGDKRLLEYLVYLAMEAGYSEKVDELCERYSLEGFLKTRE 295
P++++++ C+D+ +K +K + Y+ + Y + LC++ + + +K +
Sbjct: 394 PMVIQKVCR--CFDVEPSKVSIEKAVERYVAARGEDTAYIAGLRLLCQQCNSDAHMKAAQ 451
Query: 296 ----------PEAGF-----VHSRFLHLKELVVED-----------IIWVDEVDGLHKAI 329
P G H HL+ +V + + WV +
Sbjct: 452 ERPDQAQLWNPVKGANLRIASHHSPTHLEPIVRGEMPLVTLSSEVPVKWVSSEMEFDDCV 511
Query: 330 CHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLT 389
I + +GID EW ++ Q+AS++ V++ D++ L S L
Sbjct: 512 RDISQYRTIGIDVEWSSG-------PGAALFQVASEDTVYLIDMLVPEIRQSSTLFSTLR 564
Query: 390 RILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKIL 449
R+ + LG++ D++++ EC ++D+Q + +G L L
Sbjct: 565 RVRRV-----LGFSISADLERIPQLK---ECG-----VIDVQ---VDKRGSLQRHVAGQL 608
Query: 450 GAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSEG 501
GA L+KT + S W RPLS++Q YAALDA LL + H+R P D + G
Sbjct: 609 GAYLDKTEQCSEWADRPLSESQKNYAALDAYTLLALDAHIRGV--PDDGALG 658
>gi|294775292|ref|ZP_06740815.1| 3'-5' exonuclease [Bacteroides vulgatus PC510]
gi|294450869|gb|EFG19346.1| 3'-5' exonuclease [Bacteroides vulgatus PC510]
Length = 216
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 8/162 (4%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
KA+ +++ ++VG+D E +P++ +G +KV+++QI++ + F+F L ++ +PD L
Sbjct: 35 EKAVAYLKDQRIVGVDTETRPSFKRGT-THKVALLQISTQDTCFLFRLNRIG--MPDSLQ 91
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLA 445
L LK+G + + D L ++ L D F L +
Sbjct: 92 EFLM-----SDTLKIGLSLKDDFNSLRKREDVHPDRGNWIELQDYVGRFGIADRSLQKIF 146
Query: 446 EKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
+ G ++K++R SNWE LS+ Q YAA DA ++I++
Sbjct: 147 ANLFGQKISKSQRLSNWEAEVLSEGQKLYAATDAWACVEIYN 188
>gi|423314256|ref|ZP_17292190.1| hypothetical protein HMPREF1058_02802 [Bacteroides vulgatus
CL09T03C04]
gi|392683026|gb|EIY76364.1| hypothetical protein HMPREF1058_02802 [Bacteroides vulgatus
CL09T03C04]
Length = 216
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 8/162 (4%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
KA+ +++ ++VG+D E +P++ +G +KV+++QI++ + F+F L ++ +PD L
Sbjct: 35 EKAVAYLKDQRIVGVDTETRPSFKRGT-THKVALLQISTQDTCFLFRLNRIG--MPDSLQ 91
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLA 445
L LK+G + + D L ++ L D F L +
Sbjct: 92 EFLM-----SDTLKIGLSLKDDFNSLRKREDVHPDRGNWIELQDYVGRFGIADRSLQKIF 146
Query: 446 EKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
+ G ++K++R SNWE LS+ Q YAA DA ++I++
Sbjct: 147 ANLFGQKISKSQRLSNWEAEVLSEGQKLYAATDAWACVEIYN 188
>gi|121711303|ref|XP_001273267.1| 3'-5' exonuclease/helicase (Wrn), putative [Aspergillus clavatus
NRRL 1]
gi|119401418|gb|EAW11841.1| 3'-5' exonuclease/helicase (Wrn), putative [Aspergillus clavatus
NRRL 1]
Length = 391
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 16/170 (9%)
Query: 336 KVVGIDCEWKPNYVKGCKM-NKVSIMQIASDEMVFIFD--LIKLAEDVPDVLDSCLTRIL 392
KV+G D EWKP K + + VS++QIA+ E + +F L K A+ D + + L +IL
Sbjct: 145 KVIGFDMEWKPQATKSAGIRSNVSLIQIANSERIALFQIALFKPAKKAEDFVAASLRKIL 204
Query: 393 QSPGILKLGYNFQCDIKQLAH-----SYGELECFKHYEML----LDIQNVFKEPKGGLSG 443
+SP I+K+G + D +L + G LE Y+++ + + + K P LS
Sbjct: 205 ESPEIMKVGVTIKADCTRLRKYLGIDTRGTLELSHLYKLVKYSESNPKLINKRPV-SLSD 263
Query: 444 LAEKILGAGLNK--TRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
E+ G L K R SNW L+ Q++YAA D ++F + +
Sbjct: 264 QVEEHFGMPLEKDGNVRCSNWATA-LNYRQVQYAATDPYACFRLFDTMNT 312
>gi|296415644|ref|XP_002837496.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633368|emb|CAZ81687.1| unnamed protein product [Tuber melanosporum]
Length = 970
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 337 VVGIDCEWKPNYVKGCKMNKV--SIMQIASDEMVFIFDLIKLAEDVPD--VLDSCLTRIL 392
++G D EW P K KV S+MQIA++ + +F ++ +PD ++ L R+L
Sbjct: 640 ILGFDLEWVPANYSASKSAKVNASLMQIANESDIALFHFARVPGQIPDFELVPPNLRRVL 699
Query: 393 QSPGILKLGYNFQCDIKQLA-----HSYGELECFKHYEMLLDIQNVFKEPKG---GLSGL 444
+S I+K G + D K+++ HS G E + ++ D++ + LS L
Sbjct: 700 ESENIMKAGVSVTGDAKRVSKFLGVHSAGIFELSDLWNLVHDVRTLAGSITRRLIALSRL 759
Query: 445 AEKILGAGLNKT-RRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
E+ L L+K+ R SNW LS Q++YAA DA ++F
Sbjct: 760 TEECLYLPLDKSASRISNWAVE-LSNKQVQYAANDAYAAFRVF 801
>gi|406883317|gb|EKD30934.1| hypothetical protein ACD_77C00446G0004 [uncultured bacterium]
Length = 200
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 83/167 (49%), Gaps = 24/167 (14%)
Query: 328 AICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSC 387
AI ++ K++G D E KP + K N V+++Q++ + FIF L L +
Sbjct: 37 AIEYLGNHKIIGFDTETKPVFQANSKRNGVALLQLSGPDKAFIFRLTSLG------MPES 90
Query: 388 LTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEK 447
L IL + I+K+G D++ L + + +D+Q+V G G++EK
Sbjct: 91 LCEILSTKKIIKVGAAVNEDLRGLLRYTAFVP-----KGFVDLQHV-----GMNWGISEK 140
Query: 448 --------ILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
ILG ++K+++ SNWE LS Q+ YAA+DA V Q++
Sbjct: 141 SVRKMAAIILGVRVSKSQQLSNWEADELSPGQINYAAIDAWVCQQMY 187
>gi|159465862|ref|XP_001691139.1| hypothetical protein CHLREDRAFT_180814 [Chlamydomonas reinhardtii]
gi|158270331|gb|EDO96190.1| predicted protein [Chlamydomonas reinhardtii]
Length = 284
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 83/159 (52%), Gaps = 9/159 (5%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
+V+ ID EW+P V G + + V+++Q+AS + + + +L + +T L P
Sbjct: 90 RVIAIDLEWRPETVAG-RSSPVALVQLASATTCVLLRVSAMGY----ILPAPVTAFLSDP 144
Query: 396 GILKLGYNFQ-CDIKQLAHSYGELEC-FKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGL 453
++ LG+ + D ++ ++G + F+ + L ++ GL+ L ++LG L
Sbjct: 145 SLVILGFGWDGADEAKMKSTFGIGKARFRRFIDLQEVARTLGYHGYGLARLTRQVLGVPL 204
Query: 454 NKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
+K++ SNW L+ +QL+YA+LD + Q+F +R
Sbjct: 205 HKSKSVSRSNWAAPQLTAHQLKYASLDVLAAGQLFRALR 243
>gi|194878428|ref|XP_001974061.1| GG21519 [Drosophila erecta]
gi|190657248|gb|EDV54461.1| GG21519 [Drosophila erecta]
Length = 625
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 94/198 (47%), Gaps = 26/198 (13%)
Query: 310 ELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVF 369
+L E +I VD+ + + + H++ V+ +D EW + C N++ ++QIA+ V+
Sbjct: 404 DLPDECLIIVDKAEQFDRMLYHLQQEYVIYLDSEWMQSV---CGENQLCVLQIATGHNVY 460
Query: 370 IFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYG---ELECFKHYEM 426
+ D + + I + I K+G++ D+ L S L+ HY
Sbjct: 461 LIDCLARESLRSEHWRLLGANIFNNVNIRKVGFSMVSDLSVLQRSLPLQLRLQMPHHY-- 518
Query: 427 LLDIQNVFKE----------PKG-------GLSGLAEKILGAGLNKTRRNSNWEQRPLSQ 469
LD+++++ E P G L+ L+ LG LNK+ + SNW RPL +
Sbjct: 519 -LDLRSLWLELKKQRFGVELPFGNVNRAGDALTDLSLACLGKKLNKSNQCSNWANRPLRR 577
Query: 470 NQLEYAALDAVVLLQIFH 487
Q+ YAA+DA LL I++
Sbjct: 578 EQILYAAMDARCLLLIYN 595
>gi|383457201|ref|YP_005371190.1| ATP-dependent helicase [Corallococcus coralloides DSM 2259]
gi|380733211|gb|AFE09213.1| ATP-dependent helicase [Corallococcus coralloides DSM 2259]
Length = 917
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 87/179 (48%), Gaps = 25/179 (13%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
D+ WVD + L + +VVG+D E ++ + ++QIA+ F+ D +
Sbjct: 741 DVQWVDTLAALRAVSEELRAAEVVGLDVETALDF------GTLYLLQIATRTRTFLIDPL 794
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF 434
+ D+ ++D +L P LK+ +N + + + LA L+ + D
Sbjct: 795 AVG-DLQPIVD-----VLSGPTPLKVIHNARFERRVLAALGIALDG------VFDTLAAS 842
Query: 435 KEPKG-------GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
+ +G L+ + E+ LG L+K+ + SNW +RPL +QL YAALDA +LL ++
Sbjct: 843 RRARGTDALGGHSLAMVCERELGIVLDKSSQTSNWSRRPLEADQLSYAALDAEILLALY 901
>gi|167535101|ref|XP_001749225.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772378|gb|EDQ86031.1| predicted protein [Monosiga brevicollis MX1]
Length = 411
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 22/168 (13%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCL--TRILQ 393
+ + DCEW V ++ IMQ+A+ V++ D AE P V D C TR+LQ
Sbjct: 226 RPISFDCEWA-GTVSLYDDTRLGIMQLATKSAVYVID--ACAE--PGVFDFCAFATRLLQ 280
Query: 394 SPGILKLGYNFQCDIKQLAHSYGEL---------ECFKHYEMLLDIQNVFKE------PK 438
I+ G D + A GEL + + + + + + P+
Sbjct: 281 LTPIIGFGVMSDRDQLKSAGVDGELVGQRVLDVMDTVAQLQQTIPVPPTYPDKWQGSSPR 340
Query: 439 GGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
L+ L + ++G L K + ++WE+RPL L YAALDA VLLQ+
Sbjct: 341 ISLADLVQGLVGVSLAKHEQLADWERRPLRPESLHYAALDAYVLLQVL 388
>gi|345519834|ref|ZP_08799245.1| hypothetical protein BSFG_02749 [Bacteroides sp. 4_3_47FAA]
gi|254836293|gb|EET16602.1| hypothetical protein BSFG_02749 [Bacteroides sp. 4_3_47FAA]
Length = 216
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 8/162 (4%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
KA+ +++ ++VG+D E +P++ +G +KV+++QI++ + F+F L ++ +PD L
Sbjct: 35 EKAVAYLKDQRIVGVDTETRPSFKRGT-THKVALLQISTQDTCFLFRLNRIG--MPDSLQ 91
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLA 445
L LK+G + + D L ++ L D F L +
Sbjct: 92 EFLM-----SDTLKIGLSLKDDFNSLRRREDVHPDRGNWIELQDYVGRFGIADRSLQKIF 146
Query: 446 EKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
+ G ++K++R SNWE LS+ Q YAA DA ++I++
Sbjct: 147 ANLFGQKISKSQRLSNWEADVLSEGQKLYAATDAWACVEIYN 188
>gi|297800892|ref|XP_002868330.1| hypothetical protein ARALYDRAFT_493524 [Arabidopsis lyrata subsp.
lyrata]
gi|297314166|gb|EFH44589.1| hypothetical protein ARALYDRAFT_493524 [Arabidopsis lyrata subsp.
lyrata]
Length = 286
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 334 GCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQ 393
G +VG D EW+P+ KG KV+ +QI D + + V + L +++
Sbjct: 124 GRAIVGFDIEWRPSLRKGVLPGKVATVQICVDN-----NYCDVMHIVHSGIPQRLQHLIE 178
Query: 394 SPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQN--VFKEPKGGLSGLAEKILGA 451
++K+G D +L H YG K E L D+ N + E K GL+ L E ++
Sbjct: 179 DSTLVKVGIGIDGDSVKLFHDYG--VSIKDVEDLSDLANQKIGGEKKWGLASLTETLVCK 236
Query: 452 GLNKTRRN--SNWEQRPLSQNQLEYAALDAVVLLQIFH 487
L K R NWE PLS+ QL+YAA DA ++
Sbjct: 237 ELLKPNRIRLGNWEVYPLSKQQLQYAATDAYASWHLYQ 274
>gi|164656377|ref|XP_001729316.1| hypothetical protein MGL_3351 [Malassezia globosa CBS 7966]
gi|159103207|gb|EDP42102.1| hypothetical protein MGL_3351 [Malassezia globosa CBS 7966]
Length = 348
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 17/158 (10%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
+VG+D EW N+ G +M K ++ Q+A+ +F+ L ++ + +PD L +LQ P
Sbjct: 128 IVGLDLEW--NF--GLRMGKTAVAQLATANDIFVIHLSQM-KRLPDTL----VAMLQDPH 178
Query: 397 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGG------LSGLAEKILG 450
ILK G + D+ +L +G +E E+ + E G L L LG
Sbjct: 179 ILKSGVAVRQDLSKLQRDFG-IETCGALELSRIAWKLDPERWNGRRALISLRDLCAAYLG 237
Query: 451 AGLNK-TRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
L K R S+W Q PL+ Q+ YAA DA V L++ H
Sbjct: 238 CDLAKGPTRTSSWTQVPLTNEQITYAASDAYVSLELAH 275
>gi|291406467|ref|XP_002719588.1| PREDICTED: exonuclease 3'-5' domain containing 2 isoform 2
[Oryctolagus cuniculus]
Length = 620
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 119/262 (45%), Gaps = 23/262 (8%)
Query: 288 EGFLKTREPEAGFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPN 347
E L + P A + R LH K ++V D+++ L ++ +E V+GIDCEW
Sbjct: 57 EDQLHSSSPSASW-EERILHGKVVMVSQEAEWDQIEPLLRS--ELEDFPVLGIDCEWV-- 111
Query: 348 YVKGC--KMNKVSIMQIASDEMVFIFDLIKLAEDV--PDVLDSCLTRILQSPGILKLGYN 403
C K + +S++Q+AS + LI+L + VL L IL ILK+G
Sbjct: 112 ---NCEGKASPLSLLQMASTSGFCV--LIRLPKLTYGGRVLPRTLLDILADGTILKVGVG 166
Query: 404 FQCDIKQLAHSYGEL--ECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTR--RN 459
D +L YG C + + +N L LAE +L L+K+ R
Sbjct: 167 CSEDASKLLQDYGLAVRGCLDLRYLAVRQRNNLLRNGLSLKSLAETVLNFPLDKSLQLRC 226
Query: 460 SNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSC--SQPTDVSEGHDKIEWKSYI---VSH 514
SNW+ L+++Q+ YAA DA V + +F H+ S+ + V E D W+ +
Sbjct: 227 SNWDAENLTEDQVTYAARDAQVSVALFLHLLGYPFSRQSAVPESDDGAGWRKVLEKCRDM 286
Query: 515 MDNPKKSKKRPTIKKETESGAN 536
+D P +SK + +E A+
Sbjct: 287 VDIPFRSKAVSRLGEEVAGEAS 308
>gi|373460162|ref|ZP_09551918.1| hypothetical protein HMPREF9944_00182 [Prevotella maculosa OT 289]
gi|371956547|gb|EHO74333.1| hypothetical protein HMPREF9944_00182 [Prevotella maculosa OT 289]
Length = 216
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 95/187 (50%), Gaps = 20/187 (10%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
I V E D KA+ ++ ++G+D E +P + KG + +KV+++Q+AS + F+F L
Sbjct: 27 ITIVSETDA-DKAVDYLLSRDILGVDTETRPTFHKG-EQHKVALLQVASHDTCFLFRLND 84
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK 435
+ + + + R+L+ + K+G ++ DI L H E +D+QNV
Sbjct: 85 IG------MPASIIRLLEDQTVPKIGLSWHDDILSL-HRRTEFTP----GYFIDLQNVIG 133
Query: 436 EPKGGLSGLAEKILGAGL-----NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
E G+ L+ + L A L +K +R +NWE L+ Q +YAA DA ++++ V+
Sbjct: 134 EI--GIKDLSLQKLYANLFHQKISKRQRLTNWEADILNDKQKQYAATDAWSCIKLYEEVK 191
Query: 491 SCSQPTD 497
+ D
Sbjct: 192 RLHETKD 198
>gi|299755113|ref|XP_001828437.2| hypothetical protein CC1G_04408 [Coprinopsis cinerea okayama7#130]
gi|298411075|gb|EAU93429.2| hypothetical protein CC1G_04408 [Coprinopsis cinerea okayama7#130]
Length = 622
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 85/174 (48%), Gaps = 21/174 (12%)
Query: 338 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGI 397
+G D EWKPNYVKG K N+V+++Q+A+DEM+ + + + L LT IL+ P
Sbjct: 150 LGFDLEWKPNYVKGGKENRVALVQLANDEMILLIQVSAM-----HALPYKLTEILEDPSY 204
Query: 398 LKLGYNFQCDIKQLAHSY-GELECFKHYEMLL-DIQNV-----FKEPKGGLSGLAE---- 446
+K G Q D + + + + +L + N + P GL+ L E
Sbjct: 205 IKAGVGIQGDALKFFNDWMANVRSVVDLSLLARSVDNARWKGKYNHPI-GLARLVEVYHY 263
Query: 447 KILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSE 500
++L G K RR +NWE+ L+ + YAA DA ++ H+ + P + +
Sbjct: 264 RLLEKG--KIRR-TNWEKI-LNLEEQSYAANDAHAGYTLYRHLMGMADPANPPD 313
>gi|317051081|ref|YP_004112197.1| 3'-5' exonuclease [Desulfurispirillum indicum S5]
gi|316946165|gb|ADU65641.1| 3'-5' exonuclease [Desulfurispirillum indicum S5]
Length = 213
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 89/177 (50%), Gaps = 15/177 (8%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
H+A+ ++ C V+G D E +P + KG + S++Q+A+ V++F + + L
Sbjct: 41 HEALPALQQCPVLGFDTETRPTFRKG-QFFLPSLIQLATHNHVYLFQISRFN------LP 93
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE---PKGGLS 442
+ L I S I+K+G D+KQL ++ F + +DI ++ + GL
Sbjct: 94 AGLLEIFSSQHIVKVGAGLNYDVKQLQ----QIAAFDE-QSFVDIAHLATRLGIKQTGLR 148
Query: 443 GLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVS 499
L + G L+K R S+W ++ LS Q++YAA DA + +++ + S + + S
Sbjct: 149 TLCALLFGKRLSKKARCSDWSRKHLSAEQIKYAAADAWISRELYMALNSLLEKQNAS 205
>gi|347731627|ref|ZP_08864719.1| 3'-5' exonuclease family protein [Desulfovibrio sp. A2]
gi|347519577|gb|EGY26730.1| 3'-5' exonuclease family protein [Desulfovibrio sp. A2]
Length = 201
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 83/175 (47%), Gaps = 15/175 (8%)
Query: 319 VDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAE 378
V + D L AI + V+G D E +P + KG K+N S++Q+A ++V++F L L
Sbjct: 32 VRDEDELADAIDRLRDEDVLGFDTETRPTFRKG-KVNLPSLVQLACSDVVYLFQLNWLP- 89
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE-- 436
L +L P I+K G + DI+ L Y F ++ D+ V ++
Sbjct: 90 -----FGDALASVLSDPDIVKTGVAVRDDIRDLQKLY----AFNDAGVV-DLGEVARDLG 139
Query: 437 -PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
GL LA L ++K + SNW R L+ Q+ YAA DA V +I +R
Sbjct: 140 LETHGLRNLAANFLEVRISKGAQCSNWSNRELAPQQVLYAATDAWVSREIHLRMR 194
>gi|291406465|ref|XP_002719587.1| PREDICTED: exonuclease 3'-5' domain containing 2 isoform 1
[Oryctolagus cuniculus]
Length = 643
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 119/262 (45%), Gaps = 23/262 (8%)
Query: 288 EGFLKTREPEAGFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPN 347
E L + P A + R LH K ++V D+++ L ++ +E V+GIDCEW
Sbjct: 80 EDQLHSSSPSASW-EERILHGKVVMVSQEAEWDQIEPLLRS--ELEDFPVLGIDCEWV-- 134
Query: 348 YVKGC--KMNKVSIMQIASDEMVFIFDLIKLAEDV--PDVLDSCLTRILQSPGILKLGYN 403
C K + +S++Q+AS + LI+L + VL L IL ILK+G
Sbjct: 135 ---NCEGKASPLSLLQMASTSGFCV--LIRLPKLTYGGRVLPRTLLDILADGTILKVGVG 189
Query: 404 FQCDIKQLAHSYGEL--ECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTR--RN 459
D +L YG C + + +N L LAE +L L+K+ R
Sbjct: 190 CSEDASKLLQDYGLAVRGCLDLRYLAVRQRNNLLRNGLSLKSLAETVLNFPLDKSLQLRC 249
Query: 460 SNWEQRPLSQNQLEYAALDAVVLLQIFHHV--RSCSQPTDVSEGHDKIEWKSYI---VSH 514
SNW+ L+++Q+ YAA DA V + +F H+ S+ + V E D W+ +
Sbjct: 250 SNWDAENLTEDQVTYAARDAQVSVALFLHLLGYPFSRQSAVPESDDGAGWRKVLEKCRDM 309
Query: 515 MDNPKKSKKRPTIKKETESGAN 536
+D P +SK + +E A+
Sbjct: 310 VDIPFRSKAVSRLGEEVAGEAS 331
>gi|421618060|ref|ZP_16059041.1| 3'-5' exonuclease [Pseudomonas stutzeri KOS6]
gi|409780055|gb|EKN59700.1| 3'-5' exonuclease [Pseudomonas stutzeri KOS6]
Length = 212
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 11/182 (6%)
Query: 308 LKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEM 367
+ L + I+ AI I C VG D E KP + G + ++Q A+ +
Sbjct: 21 FQGLASDRIVMPASATEFAAAIASIRECPCVGFDTESKPTFRVGEASSGPHLVQFATTDQ 80
Query: 368 VFIFDLIKLAEDVPDVLDSCLTR-ILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEM 426
++F + VP L++ TR +LQ+P ++K+G+ + D +L + G +E + ++
Sbjct: 81 AYLFQV-----GVPGCLEA--TREVLQAPDVVKIGFGLKSDRSRLRNRLG-IELHSYIDL 132
Query: 427 LLDIQNVFKEPKGGLSGLAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQ 484
++ ++ + GL G IL + L+K+RR SNW LS+ Q YAA DA L+
Sbjct: 133 GTALRYQGRKGQVGLRGAVAGILASRLHKSRRVATSNWANAVLSEAQRAYAANDAYAALR 192
Query: 485 IF 486
+F
Sbjct: 193 VF 194
>gi|393777200|ref|ZP_10365493.1| 3'-5' exonuclease [Ralstonia sp. PBA]
gi|392715901|gb|EIZ03482.1| 3'-5' exonuclease [Ralstonia sp. PBA]
Length = 197
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 19/159 (11%)
Query: 335 CKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQS 394
+VG D E +P + KG ++Q A+ + ++F L A VP V+ + +LQ
Sbjct: 46 AGIVGFDTETRPVFTKGVDAGGPHLVQFATPDAAYLFQLHHPA--VPPVVRA----LLQD 99
Query: 395 PGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKG-----GLSGLAEKIL 449
G+LK+G+ + D +Q+A G +E E L+D+ F++ G G+ +L
Sbjct: 100 AGLLKVGFGLREDRRQIAARLG-IEA----ESLVDLSTHFRQ-HGMRRDVGVVTAVAMVL 153
Query: 450 GAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIF 486
K++R SNW L NQL YAA DA L ++
Sbjct: 154 QQAFQKSKRISTSNWAAERLRPNQLLYAANDAYAALMVY 192
>gi|319641711|ref|ZP_07996394.1| hypothetical protein HMPREF9011_01992 [Bacteroides sp. 3_1_40A]
gi|317386685|gb|EFV67581.1| hypothetical protein HMPREF9011_01992 [Bacteroides sp. 3_1_40A]
Length = 216
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 8/162 (4%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
KA+ +++ ++VG+D E +P++ +G +KV+++QI++ + F+F L ++ +PD L
Sbjct: 35 EKAVAYLKDQRIVGVDTETRPSFKRGT-THKVALLQISTQDTCFLFRLNRIG--MPDSLQ 91
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLA 445
L LK+G + + D L ++ L D F L +
Sbjct: 92 EFLM-----SDTLKIGLSLKDDFNSLRKREDVHPDRGNWIELQDYVGRFGIADRSLQKIF 146
Query: 446 EKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
+ G ++K++R SNWE LS+ Q YAA DA ++I++
Sbjct: 147 ANLFGQKISKSQRLSNWEADVLSEGQKLYAATDAWACVEIYN 188
>gi|356538051|ref|XP_003537518.1| PREDICTED: LOW QUALITY PROTEIN: Werner Syndrome-like
exonuclease-like [Glycine max]
Length = 210
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 77/173 (44%), Gaps = 22/173 (12%)
Query: 338 VGIDCEWKPNYVKGCKMNKVSIMQIASD-EMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
+G D EWKP + KG KV++MQI D + LI +P L +L+ P
Sbjct: 40 IGFDIEWKPTFRKGVPPGKVAVMQIYGDTRHCHVLHLIH--SGIP----XNLQLLLEDPT 93
Query: 397 ILKLGYNFQCDIKQLAHSY-----GELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGA 451
+LK+G D ++ Y G + H + + + K GL+ L EK+L
Sbjct: 94 VLKVGAGIDGDAVKVFRDYNISVKGVTDLSFHAN-----RKLGGDHKWGLASLTEKLLSK 148
Query: 452 GLNKTR--RNSNWEQRPLSQNQLEYAALDAVV---LLQIFHHVRSCSQPTDVS 499
L K R NWE LS+ QLEYAA DA L Q+ + + TD S
Sbjct: 149 QLKKPNKIRLGNWETPVLSKEQLEYAATDAFASWYLYQVIKDLPDAQKVTDRS 201
>gi|325297843|ref|YP_004257760.1| 3'-5' exonuclease [Bacteroides salanitronis DSM 18170]
gi|324317396|gb|ADY35287.1| 3'-5' exonuclease [Bacteroides salanitronis DSM 18170]
Length = 210
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 8/164 (4%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
KA+ ++ VVG+D E +P++ +G ++KV+++QIA+ + F+F L L +PD L+
Sbjct: 35 RKAVRYLNTHSVVGVDTETRPSFKRGT-VHKVALLQIATHDTCFLFRLNHLG--LPDFLE 91
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLA 445
L +LK+G + + D L ++ L D F + L +
Sbjct: 92 EFLQN-----NVLKVGLSLRDDFAMLRKRNQGDPRDGNWIELQDYVPRFGIEEKSLQKIY 146
Query: 446 EKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
+ G ++KT+R SNWE L++ Q YAA DA ++I+ ++
Sbjct: 147 ALLFGKKISKTQRLSNWEADVLTEAQQLYAATDAWACVEIYTYL 190
>gi|374287715|ref|YP_005034800.1| putative 3'-5' exonuclease [Bacteriovorax marinus SJ]
gi|301166256|emb|CBW25831.1| putative 3'-5' exonuclease [Bacteriovorax marinus SJ]
Length = 193
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 83/157 (52%), Gaps = 15/157 (9%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
++G D E +P++ KG + V+++Q++++ ++F L K+ L + L +L
Sbjct: 45 ILGFDTETRPSFKKGENYD-VALLQLSTENDAYLFRLNKMK------LPNELVDLLADEN 97
Query: 397 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE---PKGGLSGLAEKILGAGL 453
I+K G + DIK L +L FK E ++Q+V KE GL L L L
Sbjct: 98 IVKAGVAVRDDIKSLQ----KLNPFKE-ESFCELQDVAKELGVKNFGLRALCAIFLNYRL 152
Query: 454 NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
+K + +NWEQ L+Q Q+ YAA DA V LQI+ ++
Sbjct: 153 SKRAKITNWEQPKLTQAQIHYAACDAWVGLQIYKKMQ 189
>gi|308809972|ref|XP_003082295.1| ankyrin-like protein (ISS) [Ostreococcus tauri]
gi|116060763|emb|CAL57241.1| ankyrin-like protein (ISS) [Ostreococcus tauri]
Length = 876
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 17/155 (10%)
Query: 335 CKVVGIDCEWKPNYVKGCKMNKVSIMQI--ASDEMVFIFDLIKLAEDVPDVLDSCLTRIL 392
C+ DCEW+ +S +QI A FI D +++ +D L +
Sbjct: 588 CEAFSFDCEWR-------DPRPLSTLQISPAHTRETFIIDALRVGKDA---FSQFLIAVF 637
Query: 393 QSPGILKLGYNFQCDIKQLAHSYGELECFKHY--EMLLDIQNVFKEPKGGLSGLAEKILG 450
+ K+G+ + D +++ S G Y ++D+Q V L+ + LG
Sbjct: 638 GDFSVRKIGFAAEQDWRRIRISAGNAALPASYCNANVIDLQGV---ELVSLASVVADTLG 694
Query: 451 AGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
L+K + SNW+ RPLSQ QL YAALDA VLL I
Sbjct: 695 FALDKRCQRSNWDARPLSQQQLFYAALDAEVLLDI 729
>gi|317502960|ref|ZP_07961050.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
gi|315665926|gb|EFV05503.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
Length = 223
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 95/192 (49%), Gaps = 26/192 (13%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
KA+ ++ C ++G+D E +P + KG + +KV+++Q+AS + F+F L + +P
Sbjct: 37 KAVDYLLSCDILGVDTETRPMFRKG-EQHKVALLQVASRDTCFLFRLNDIG--IP----P 89
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE---PKGGLSG 443
+ R+L+ + K+G ++ D+ L + +E Y +D+Q++ KE L
Sbjct: 90 SVIRLLEDCTVPKIGLSWHDDLLSL---HRRVEFNPGY--FVDLQDIVKEIGIKDLSLQK 144
Query: 444 LAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR-----------SC 492
L I ++K +R +NWE LS Q YAA DA ++++ ++
Sbjct: 145 LYANIFHQKISKRQRLTNWEADVLSDKQKLYAATDAWACIKLYEEIKWLYKTKEYTLVVS 204
Query: 493 SQPTDVSEGHDK 504
S+P D H++
Sbjct: 205 SEPMDSDASHNE 216
>gi|333377065|ref|ZP_08468801.1| hypothetical protein HMPREF9456_00396 [Dysgonomonas mossii DSM
22836]
gi|332886278|gb|EGK06522.1| hypothetical protein HMPREF9456_00396 [Dysgonomonas mossii DSM
22836]
Length = 197
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 93/185 (50%), Gaps = 9/185 (4%)
Query: 307 HLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDE 366
+ +E+ II + E KA ++ C+ +G D E +P + KG +++++MQ+++ +
Sbjct: 13 YAQEVFPGRIIVIQEETEAKKACDYLSKCEAIGFDTETRPAFRKGV-THQIALMQLSTID 71
Query: 367 MVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEM 426
F+F L + +CL +L +P + K+G + + D + H L E+
Sbjct: 72 TCFLFRLNLIG------FPACLAELLVNPAVKKIGLSLKDDFSAI-HKRMSLAPANFVEL 124
Query: 427 LLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
+++ E GL + + ++K +R SNWE LS +Q YAALDA L+I+
Sbjct: 125 QSFVKDYGIE-DNGLQRIYGILFEKRISKGQRLSNWEVDVLSDSQKMYAALDAWACLRIY 183
Query: 487 HHVRS 491
+ +++
Sbjct: 184 NELKN 188
>gi|163782924|ref|ZP_02177919.1| DNA polymerase I (PolI) [Hydrogenivirga sp. 128-5-R1-1]
gi|159881604|gb|EDP75113.1| DNA polymerase I (PolI) [Hydrogenivirga sp. 128-5-R1-1]
Length = 576
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 103/202 (50%), Gaps = 19/202 (9%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
+V E L +A+ +E + ID E +++ + Q+ +E +F+ DL
Sbjct: 5 YVTEKAHLGRAVASLERVPYLFIDTE--------TTGDRIRLFQVGDEERIFVIDLF--- 53
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEP 437
D+P+ +D L ++ G++ G+N + D+K + G + + ++ ++ +
Sbjct: 54 -DLPEAVD-VLKELIAKKGVV--GHNLKFDLK-FMYPLG-IVPYATFDTMIG-SFLLGYE 106
Query: 438 KGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS-CSQPT 496
+ LS +AE++LG ++K+ + S+W + L++ Q+EYAA D +V+ ++F+ +R +
Sbjct: 107 RHSLSHVAERLLGYTMDKSLQLSDWSRTALTKQQIEYAATDVLVVRELFYKMREKLNALG 166
Query: 497 DVSEGHDKIEWKSYIVSHMDNP 518
+ G + + ++ V + NP
Sbjct: 167 ETDRGEELLRTRTARVFGLTNP 188
>gi|68074623|ref|XP_679228.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56499925|emb|CAH95040.1| conserved hypothetical protein [Plasmodium berghei]
Length = 661
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 93/234 (39%), Gaps = 76/234 (32%)
Query: 321 EVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV 380
E+D +++ + + VGID EW + K S++ ++ + V++ DL + +
Sbjct: 398 EIDNINRNLRMKKKSFYVGIDVEWN-------RKQKASVISFSTYKKVYVVDLFNIDYNY 450
Query: 381 PDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY------------------------- 415
++ IL++P I KL +NF CDI ++ +
Sbjct: 451 KLLVYKFFKWILENPFIYKLFFNFLCDIYIMSMYFKNISNLNAFINVIDLKKPLTVEKCN 510
Query: 416 -----------------------GELECFKH------YEMLLDIQNVFKEPKGGLSGLAE 446
+ E FK Y +I+N F EP+ ++ L +
Sbjct: 511 NEDIYNCNNIINTELMNRNILENNDTELFKKLANSSTYNFKKEIENKFNEPENIITALPK 570
Query: 447 KI---------------LGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
KI L L+K + SNW +RPLS+ Q+EYA LDA VL+ I
Sbjct: 571 KINKHYFKSLNDLCFQFLRKKLSKKLQLSNWNKRPLSKEQIEYAGLDAYVLIPI 624
>gi|338997813|ref|ZP_08636500.1| ribonuclease D [Halomonas sp. TD01]
gi|338765274|gb|EGP20219.1| ribonuclease D [Halomonas sp. TD01]
Length = 403
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 31/198 (15%)
Query: 299 GFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS 358
V +R L L W+D D L A + G +V+ +D E+ + + +
Sbjct: 19 AIVPTRKFALSSLAPSMYQWIDSADALDAACEQVAGARVIALDTEF---FRENTFFPVPA 75
Query: 359 IMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGE- 417
++Q + +M ++ D L +P Q +L H+ E
Sbjct: 76 LIQFTTGDMAYLVD------------------PLSTPCTASFRDLLQNSAIKLLHACSED 117
Query: 418 LECFKHYE-----MLLDIQ--NVF--KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLS 468
LE F+H+ L+D Q F + P G L E +G L K SNW +RPL+
Sbjct: 118 LEVFQHWAGVLPTPLIDTQVAQAFLGETPGMGYQKLVEHWMGETLPKEETRSNWLERPLT 177
Query: 469 QNQLEYAALDAVVLLQIF 486
+Q EYAALD + LL+++
Sbjct: 178 LSQCEYAALDVIYLLKVW 195
>gi|198277310|ref|ZP_03209841.1| hypothetical protein BACPLE_03522 [Bacteroides plebeius DSM 17135]
gi|198269808|gb|EDY94078.1| 3'-5' exonuclease [Bacteroides plebeius DSM 17135]
Length = 213
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 84/164 (51%), Gaps = 8/164 (4%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
KAI ++ +VG+D E +P++ KG +NKV+++Q+++ + F+F L L +PD L+
Sbjct: 35 RKAIDYLNTHVLVGVDTETRPSFRKGA-VNKVALLQVSTYDTCFLFRLNHLG--LPDFLE 91
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLA 445
L +LK+G + + D L + ++ L D F + L +
Sbjct: 92 EFLQN-----DVLKIGLSLKDDFAMLRRRNQKDPRMGNWVELQDYVASFGIEEKSLQKIY 146
Query: 446 EKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
+ ++K++R SNWE L++ Q YAA DA ++I+ ++
Sbjct: 147 ALLFQEKISKSQRLSNWEADTLTEAQQLYAATDAWACVRIYQYL 190
>gi|164515888|emb|CAP48106.1| putative integron gene cassette protein [uncultured bacterium]
Length = 199
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 11/161 (6%)
Query: 330 CHIEGCKV--VGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSC 387
H E CK VG D E KP++V G ++Q+++ + F+F + D
Sbjct: 41 AHSEICKSIHVGFDIESKPSFVAGQPRTGPHVLQLSTQQQAFLF------RPGNTICDEI 94
Query: 388 LTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEK 447
L I+QS I+K+G+ D + G ++ E+ + + + P+ GL
Sbjct: 95 LAEIIQSKTIIKVGFGLSSDRAPIQRKLG-VKLRSAIELSVLVHRLGYRPRVGLQSAVSI 153
Query: 448 ILGAGLNKTRRN--SNWEQRPLSQNQLEYAALDAVVLLQIF 486
+L L K+++ SNW + LS Q+ YAA DA LQ++
Sbjct: 154 VLNQYLQKSKKLTLSNWNAKLLSARQILYAANDAYASLQVY 194
>gi|255083480|ref|XP_002504726.1| predicted protein [Micromonas sp. RCC299]
gi|226519994|gb|ACO65984.1| predicted protein [Micromonas sp. RCC299]
Length = 1648
Score = 65.5 bits (158), Expect = 7e-08, Method: Composition-based stats.
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 36/180 (20%)
Query: 332 IEGCKVVGIDCEWKPNYVKG--CKMNKVSIMQIASDE----------MVFIFDLIKL--A 377
+E C VVG+DCEW+P G +M VS++QIA+ V + D L
Sbjct: 1139 LESCSVVGVDCEWRPGRRSGDDAQMAPVSLLQIAAGASAAQDPTIGARVVLVDCFALLGP 1198
Query: 378 EDVPDVLDSC---LTRILQSPGILKLGYNFQCDIKQLAHSYGE------------LECFK 422
P+ + C + R+ + + G+ D+++L SY E + C +
Sbjct: 1199 RAAPEAAEECVNFIARVFER--CVLCGFGVASDVRRLLASYPERFQKRFAGVSCRVVCVR 1256
Query: 423 HYEMLLDIQNVFKEPK-GGLSGLAEKILGA-GLNKTRRNSNWEQRPLSQNQLEYAALDAV 480
+ F+E + GL+ + + LG ++K+++ S+W RPL++ Q+ YAALDA+
Sbjct: 1257 EAAIGF---RFFRERECRGLAAMCARALGGRAIDKSQQRSDWGARPLTRAQISYAALDAL 1313
>gi|167625422|ref|YP_001675716.1| 3'-5' exonuclease [Shewanella halifaxensis HAW-EB4]
gi|167355444|gb|ABZ78057.1| 3'-5' exonuclease [Shewanella halifaxensis HAW-EB4]
Length = 297
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 86/189 (45%), Gaps = 18/189 (9%)
Query: 317 IWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCK-MNKVSIMQIASDEMVFIFDLIK 375
I V +D L AI IE +G D E + KG + N +S++QIA+ ++F +
Sbjct: 94 ISVVTLDSLQMAIADIEAQSWIGFDTETAATFEKGRRNTNPISLIQIATATHCYLFRMQA 153
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQ---N 432
+ + V LT ++ + +LK+G + DI + + +LD+ N
Sbjct: 154 INIEPFKV---ALTPVMSNEHLLKIGIGLRSDINGMKRDFD-----MSIAAMLDLNWLMN 205
Query: 433 VFKEPKG-GLSGLAEKILGAGLNKTRRN--SNWEQ---RPLSQNQLEYAALDAVVLLQIF 486
PK G A +L L K+++ SNW + PLS+ QL+YAA D V L I
Sbjct: 206 QLGAPKQLGTQQAAATVLALKLPKSKKVTLSNWSKPLTEPLSELQLQYAAADTFVALDIL 265
Query: 487 HHVRSCSQP 495
H V + P
Sbjct: 266 HAVTAQVAP 274
>gi|15606966|ref|NP_214348.1| DNA polymerase I (PolI) [Aquifex aeolicus VF5]
gi|6015000|sp|O67779.1|DPO1_AQUAE RecName: Full=DNA polymerase I; Short=POL I
gi|2984205|gb|AAC07735.1| DNA polymerase I (PolI) [Aquifex aeolicus VF5]
Length = 574
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 19/204 (9%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
D +V +GL KAI +E + +D E +++ ++QI +E ++ DL
Sbjct: 2 DFEYVTGEEGLKKAIKRLENSPYLYLDTE--------TTGDRIRLVQIGDEENTYVIDLY 53
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF 434
++ + P L +++ GI+ G+N + D+K L + YG M+ +
Sbjct: 54 EIQDIEP------LRKLINERGIV--GHNLKFDLKYL-YRYGIFPSATFDTMIASY--LL 102
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQ 494
+ L+ + +LG ++K+ + S+W LS QL+YAA D +VL ++F +R
Sbjct: 103 GYERHSLNHIVSNLLGYSMDKSYQTSDWGASVLSDAQLKYAANDVIVLRELFPKMRDMLN 162
Query: 495 PTDVSEGHDKIEWKSYIVSHMDNP 518
D G + ++ ++ + + +P
Sbjct: 163 ELDAERGEELLKTRTAKIFDLKSP 186
>gi|288800138|ref|ZP_06405597.1| 3'-5' exonuclease domain protein [Prevotella sp. oral taxon 299
str. F0039]
gi|288333386|gb|EFC71865.1| 3'-5' exonuclease domain protein [Prevotella sp. oral taxon 299
str. F0039]
Length = 210
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 87/173 (50%), Gaps = 13/173 (7%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
+A+ ++ +++G+D E +P++ KG +KVS++Q+AS ++ F+F L + L +
Sbjct: 37 RAVEYLMQQEILGVDTETRPSFSKGIT-HKVSLLQVASHDVCFLFRLNMIG------LPN 89
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFK--HYEMLLDIQNVFKEPKGGLSGL 444
CL R+L++ I +G ++ D+ L + FK H+ L I L L
Sbjct: 90 CLIRLLENNYIPMIGLSWNDDLLALRKR----KEFKPGHFIDLQKIVGAIGIEDLSLQKL 145
Query: 445 AEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
+ G ++K +R SNW+ L+ Q YAA+DA +Q++ + D
Sbjct: 146 YANVFGEKISKRQRLSNWDHEVLNDKQKTYAAIDAWACIQLYEEIARLITTND 198
>gi|336399777|ref|ZP_08580577.1| 3'-5' exonuclease [Prevotella multisaccharivorax DSM 17128]
gi|336069513|gb|EGN58147.1| 3'-5' exonuclease [Prevotella multisaccharivorax DSM 17128]
Length = 217
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 86/166 (51%), Gaps = 15/166 (9%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
KA+ ++ ++G+D E KP + KG + NKV+++Q+++ + F+F L +
Sbjct: 37 KAVDYLLKSDIMGVDTETKPAFHKG-QQNKVALLQVSNRDTCFLFRLNFTG------ITP 89
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE---PKGGLSG 443
+ R+L+ G+ K+G ++ DI+ L E F+ +D+Q++ E L
Sbjct: 90 AIQRLLEDKGVKKIGLSWHDDIRGLEAR----EPFQP-GFFIDLQDIVGEIGIQDLSLQK 144
Query: 444 LAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
+ I ++K +R +NWE LS Q +YAA+DA ++I+ +
Sbjct: 145 IYANIFHEKISKRQRLTNWEAPTLSDKQKQYAAIDAWSCIKIYEEI 190
>gi|445495924|ref|ZP_21462968.1| 3'-5' exonuclease domain-containing protein [Janthinobacterium sp.
HH01]
gi|444792085|gb|ELX13632.1| 3'-5' exonuclease domain-containing protein [Janthinobacterium sp.
HH01]
Length = 220
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 338 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGI 397
+G D E KP + KG ++Q ++D ++F ++ + + L +L++P +
Sbjct: 49 IGFDTESKPTFTKGETSTGPHLIQFSTDHKAYLF---QIGSSISAPMREVLQAVLEAPAL 105
Query: 398 LKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTR 457
LK+G+ D+K+L H+ + ++ + ++ + G K G L K++
Sbjct: 106 LKVGFGLSDDVKRL-HAKLAIRAAGVVDLSVALRTPGQRNDLGAKTAVAKFFGQKLQKSK 164
Query: 458 R--NSNWEQRPLSQNQLEYAALDAVVLLQIFHH 488
+ +NW L++ Q+ YAA DA V L+++ H
Sbjct: 165 KISTTNWALPRLNEKQILYAADDAQVALRVYRH 197
>gi|242277603|ref|YP_002989732.1| 3'-5' exonuclease [Desulfovibrio salexigens DSM 2638]
gi|242120497|gb|ACS78193.1| 3'-5' exonuclease [Desulfovibrio salexigens DSM 2638]
Length = 198
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 9/171 (5%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
I +D + + AI + C+++G D E +P + KG S++Q+A+++ VF+ L
Sbjct: 28 IKLIDREEDVPAAIEELSRCELLGFDTETRPVFRKGVSYPP-SLIQLATEDCVFLLHLNH 86
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK 435
++ L + +L S I+K G D+K+L E K + L D+ +
Sbjct: 87 IS------LSDHIKEVLSSADIIKTGVAVINDVKEL-RDVSPFEG-KGFVDLGDLARSLE 138
Query: 436 EPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
GL LA +LG ++K + SNW ++ L+ Q+ YAA DA V +I+
Sbjct: 139 MQTNGLRNLAANLLGFRISKGVQCSNWGRKELTPQQITYAATDAWVSREIY 189
>gi|125546566|gb|EAY92705.1| hypothetical protein OsI_14456 [Oryza sativa Indica Group]
Length = 231
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 17/163 (10%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
W+ E +H++ H VVG+D EW+P V+++Q+ D +F ++ A
Sbjct: 39 WLGETYRIHRSCGHP---LVVGLDVEWRP---AAPVPGPVAVLQLCVDRRCLVFQILH-A 91
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEP 437
+ VPD L+R L P +G + D +L YG LE + ++ + P
Sbjct: 92 DYVPD----ALSRFLADPRFTFVGVGVRDDAARLRVGYG-LEVPRAVDLRALAADTLGRP 146
Query: 438 ---KGGLSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYA 475
+ GL L +++G ++K R S W++R LS++Q +YA
Sbjct: 147 DLRRAGLRALVREVMGVQMDKPHHVRVSAWDKRNLSEDQFKYA 189
>gi|308501811|ref|XP_003113090.1| hypothetical protein CRE_25297 [Caenorhabditis remanei]
gi|308265391|gb|EFP09344.1| hypothetical protein CRE_25297 [Caenorhabditis remanei]
Length = 793
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 86/175 (49%), Gaps = 17/175 (9%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAE-DVPD-VLDSCLT 389
+E +G D E+KP ++ +++++ +Q+ +E VF+ D + L + D+ + +
Sbjct: 444 VEEGTYIGYDSEFKPGHLTDSSISRMATIQLFFNEKVFLVDCVILEKIDISEGMWKKFFE 503
Query: 390 RILQSPGILKLGYNFQCDIKQL-----------AHSYGELECFKHYEMLLDIQNV----F 434
+ S + +G++ + D++ L C K + +L+ +
Sbjct: 504 SLFHSKKLTVIGFDMKNDMEALFTVRPIRDDFRQEDVKNFICVKRFVEILNEYDASILSL 563
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
+ L L E++L ++KT + NW+ RPL +NQ+ YA+LDAV++L +F +
Sbjct: 564 TKKSCRLITLVEELLNLTMDKTEQTGNWQCRPLRKNQIVYASLDAVIVLDLFRKI 618
>gi|156363461|ref|XP_001626062.1| predicted protein [Nematostella vectensis]
gi|156212924|gb|EDO33962.1| predicted protein [Nematostella vectensis]
Length = 363
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 337 VVGIDCEWKPNYVK---GCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQ 393
+G+D EW+P ++ G K NK + +Q+A + + L + D+ L L +L
Sbjct: 87 AIGMDIEWRPQFIPKKLGGKENKTATLQLAVNHSCLVLHLFHMRLDL---LPRSLLNVLG 143
Query: 394 SPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKG-GLSGLAEKILGAG 452
+ ILK+G D +L E+ C + + + + G GL LA+ ILG
Sbjct: 144 NIRILKVGSGISGDAVKLLRDT-EILCNGRSDTQVYAKVLALNQDGTGLKKLAKTILGIE 202
Query: 453 LNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
L+K + SNWE PL+ Q YAALDA V ++F
Sbjct: 203 LDKPKYISLSNWELFPLTYEQASYAALDAWVSFKLF 238
>gi|328770378|gb|EGF80420.1| hypothetical protein BATDEDRAFT_88588 [Batrachochytrium
dendrobatidis JAM81]
Length = 715
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 27/166 (16%)
Query: 338 VGIDCEWKPNYVKGCKMNKVSIMQIA-----SDEMVFIFDLIKLAEDVPDVLDSC--LTR 390
+GID EW Y +G +++SI QIA + V+I DL L D+ ++C LT
Sbjct: 553 IGIDAEW---YNQGS--DRMSIFQIAVLLNDTSRRVYILDLFNL-----DLTETCNVLTA 602
Query: 391 ILQSPGILKLGYNFQCDIKQLAH-------SYGELECFK-HYEMLLDI--QNVFKEPKGG 440
+ S I LG++ D+K+L Y ++ K E+ D ++ K+ + G
Sbjct: 603 LFSSKRITTLGFDGVQDLKKLNALMPNLPLPYNLVDLNKLSMELFADKLKRHDIKKQQLG 662
Query: 441 LSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
LS L +L L+K R ++W +RPL Q QL YAA D+ VL+ I+
Sbjct: 663 LSDLVLVVLDKTLDKRVRLTDWNRRPLRQCQLTYAASDSDVLIDIY 708
>gi|436735997|ref|YP_007318125.1| DNA-directed DNA polymerase [Gloeocapsa sp. PCC 7428]
gi|428267598|gb|AFZ33542.1| DNA-directed DNA polymerase [Gloeocapsa sp. PCC 7428]
Length = 598
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 14/183 (7%)
Query: 308 LKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGC--KMNKVSIMQIA-S 364
L++ + + + + L + + I+ + GIDCE G K +++ ++QIA
Sbjct: 9 LRDYSTPNYLLIQDEKTLARQLKAIQSTALFGIDCE-----TTGLDPKRDRLRLVQIAVP 63
Query: 365 DEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHS-YGELECFKH 423
V + DL +A P L L ++L SP LK+G+N + + + L + G F
Sbjct: 64 HARVLLIDLFAIA---PKHLKP-LRQLLNSPA-LKIGHNLKFEWQFLTQAGLGLAHPFFD 118
Query: 424 YEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLL 483
++ I + + K L +A K+LG LNK+ ++SN+ Q L+ QL YAA+DA +LL
Sbjct: 119 TQLAYRIWSAGIKTKLSLKSVASKLLGVKLNKSLQHSNFAQAELTSQQLRYAAIDAAILL 178
Query: 484 QIF 486
++
Sbjct: 179 DLY 181
>gi|388851398|emb|CCF54983.1| uncharacterized protein [Ustilago hordei]
Length = 620
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 22/167 (13%)
Query: 334 GCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQ 393
G +G+D EW N + ++ +++QI S ++ I L ++ +P +L + IL+
Sbjct: 204 GPGPMGLDLEW--NISRFVGASRTALLQICSPTLIVILHLSAMSHRIPPLLRT----ILE 257
Query: 394 SPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK--EPKG--------GLSG 443
P I+K G + D +L Y F H L++ N+ K +P+ L
Sbjct: 258 DPTIIKTGVAIKNDALKLQRDY-----FIHTRNALELGNLAKLAQPQKWAGVNHLISLRD 312
Query: 444 LAEKILGAGLNK-TRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L LG L K + R S+WE+ PL + Q+EYAA D L++ +
Sbjct: 313 LTRIYLGKKLKKDSVRVSDWERFPLEKGQIEYAASDTFASLEVLRAI 359
>gi|237708989|ref|ZP_04539470.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|229457051|gb|EEO62772.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
Length = 221
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 81/162 (50%), Gaps = 8/162 (4%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
KA+ +++ ++VG+D E +P++ +G +KV+++QI++ + F+F L ++ +PD L
Sbjct: 40 EKAVAYLKDQRIVGVDTETRPSFKRGT-THKVALLQISTQDTCFLFRLNRIG--MPDSLQ 96
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLA 445
L LK+G + + D L ++ L D F L +
Sbjct: 97 EFLM-----SDTLKIGLSLKDDFNSLRKRENVHPDRGNWIELQDYVGRFGIADRSLQKIF 151
Query: 446 EKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
+ ++K++R SNWE LS+ Q YAA DA ++I++
Sbjct: 152 ANLFDQKISKSQRLSNWEADVLSEGQKLYAATDAWACVEIYN 193
>gi|387131822|ref|YP_006297795.1| 3'-5' exonuclease [Prevotella intermedia 17]
gi|386374670|gb|AFJ07519.1| 3'-5' exonuclease [Prevotella intermedia 17]
Length = 227
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 85/165 (51%), Gaps = 9/165 (5%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
+KA+ ++ ++GID E +P + KG + +KV+++Q+++ ++ F+F L + +
Sbjct: 36 NKAVDYLLSADILGIDSETRPVFKKG-QHHKVALLQVSTRDICFLFRLNLIG------MP 88
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLA 445
C+ R+L+ +LK+G + D L H + + + L DI + F L L
Sbjct: 89 PCIIRLLEDTTVLKVGLSLHDDFMML-HQRANFKKGRFID-LQDIVSQFGIEDLSLQKLY 146
Query: 446 EKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
+ + K ++ SNWE L++ Q YAA DA +QI+ ++
Sbjct: 147 ANLFHERITKRQQLSNWEAPVLTEQQKTYAATDAWTCIQIYERLQ 191
>gi|170048985|ref|XP_001853674.1| 3'-5' exonuclease [Culex quinquefasciatus]
gi|167870951|gb|EDS34334.1| 3'-5' exonuclease [Culex quinquefasciatus]
Length = 755
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 26/206 (12%)
Query: 331 HIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDE-MVFIFDLIKLAEDVPDVLDSCLT 389
H +++G DCEW + K + V+++Q+AS + + + L ++ P+ L
Sbjct: 66 HCRDYRILGFDCEW---VTEKGKRHPVALLQLASHQGLCALIRLCQMKRIPPE-----LG 117
Query: 390 RILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKG----GLSGLA 445
+L PGILK+G D + L Y E LD++++ + + G++ LA
Sbjct: 118 ELLNDPGILKVGIGAIEDAQLLRSDYN-----LKVESALDLRHLAERCRVPGPYGMARLA 172
Query: 446 EKILGAGLNK--TRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH----HVRSCSQPTDVS 499
EK LG L+K R S+WE LS+ QL+YAA DA V +++F V C T
Sbjct: 173 EKSLGLQLDKHWRVRASDWEALELSERQLKYAANDAHVAVELFRLYADRVLRCGIFTTRK 232
Query: 500 EGHDKI--EWKSYIVSHMDNPKKSKK 523
+ D + E + ++ +P KS+K
Sbjct: 233 KWFDSLMTEIECFLDQRYKDPPKSQK 258
>gi|406898744|gb|EKD42224.1| hypothetical protein ACD_73C00257G0002 [uncultured bacterium]
Length = 203
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 89/174 (51%), Gaps = 15/174 (8%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
+ +V L +A ++ +VG+D E +P + G + + S++QIA+ V++F L +
Sbjct: 25 VYFVKNTQDLERAQLELQNEPIVGVDTETQPAFRAG-QFHLPSLVQIATSRCVYLFPLKR 83
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK 435
L D VL +L + I+K G D QL + E + ++D+ +V +
Sbjct: 84 L--DCSKVL----AELLGNSAIIKAGIGLSHDFLQLRLHFPFQE-----KNVVDLASVAR 132
Query: 436 E---PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
+ + G+ LA LG ++K ++ SNW + L+QNQ+ YAA DA V +++
Sbjct: 133 KNGMEQTGVRNLAALFLGIRISKGQKTSNWGRTELTQNQIIYAATDAWVCRELY 186
>gi|406661714|ref|ZP_11069828.1| ribonuclease D [Cecembia lonarensis LW9]
gi|405554465|gb|EKB49550.1| ribonuclease D [Cecembia lonarensis LW9]
Length = 200
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 93/177 (52%), Gaps = 10/177 (5%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
DI+ V+ D + + ++ ++G D E +P++ KG + VS++Q+A++++ F+ L
Sbjct: 22 DIVLVNSKDQIKEVALELDRHSLLGFDTETRPSFRKGTQY-YVSLLQLATEDVAFLIRLN 80
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV- 433
++ P + IL+ P ++K+G D++ L E +++ +++ V
Sbjct: 81 EIGMPGP------IQEILEDPEVIKIGAAVLDDLRGLRKVSIGFEPQSFFDLNDELKKVG 134
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
F+ G+ LA +L ++K+ + SNWE L+ Q YAA DA V L+I+ ++
Sbjct: 135 FQNI--GVRNLAAMVLQMRISKSEQVSNWEAVELTDRQQLYAATDAWVCLEIYKKLQ 189
>gi|170590466|ref|XP_001899993.1| 3'-5' exonuclease family protein [Brugia malayi]
gi|158592625|gb|EDP31223.1| 3'-5' exonuclease family protein [Brugia malayi]
Length = 331
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 58/214 (27%)
Query: 332 IEGCKVVGIDCEWKPNYV-----------------KGCKMNKVSIMQIASDEMVFIFDLI 374
IE ++GID EWKP ++ G + +V++ QI ++ D+I
Sbjct: 35 IEEADLIGIDTEWKPLFICTNERLKTFLEIARKVSVGLSLLQVALFQICVQHCSYLVDVI 94
Query: 375 KLAEDVPDVLDSCLTRILQS----PGILKLGYNFQCDIKQLAHSYGELECFKHYE----- 425
L E+V + + TR ++ +KLG++F D+K L SY L+ + +
Sbjct: 95 TL-ENV--LTEEQWTRFFKALFCDSTAIKLGFDFLNDLKVLRASYPYLQPLEEMKNVVCI 151
Query: 426 ------------MLLDIQNVFKEPKGG-----------------LSGLAEKILGAGLNKT 456
LD + P L+ L K+LG L+KT
Sbjct: 152 LKLVKSLLASNPAFLDFSDSINLPLSSETENLLDIVSDETVHFRLTDLCRKVLGQALDKT 211
Query: 457 RRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
+ NW RPL + Q++YAA+D LL +++ ++
Sbjct: 212 EQIGNWAMRPLRREQMKYAAMDGYCLLNLYNKLK 245
>gi|449295362|gb|EMC91384.1| hypothetical protein BAUCODRAFT_80005, partial [Baudoinia
compniacensis UAMH 10762]
Length = 213
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 17/181 (9%)
Query: 331 HIEGCKVVGIDCEWKPNYVKGCKMNK-VSIMQIASDEMVFIFDLIKLAEDVPD-VLDSCL 388
H G V+G D EW+P K + VS++Q+A ++ + + + A + P ++ + L
Sbjct: 27 HFLGQPVLGFDIEWEPMVKKTAPAKQNVSLIQLAIEDRIILIHVALFAGNGPQQLMPTSL 86
Query: 389 TRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEM--------LLDIQNVFKEPKGG 440
IL+S ++K+G N Q D +++ H Y ++ +E+ D + + K KG
Sbjct: 87 RMILESDSVMKVGVNIQGDARRI-HEYLGVQMRAQFELSHLYKVVTFTDRKAINKTLKGA 145
Query: 441 -LSGLAEKILGAGLNKTR-RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV---RSCSQP 495
L + IL L K R S+W R LS+ Q +Y+A DA ++FH + R +P
Sbjct: 146 SLQAQVKNILLLPLKKDDVRVSSWS-RALSKEQSDYSASDAYAGFRLFHALEAKRKAMEP 204
Query: 496 T 496
T
Sbjct: 205 T 205
>gi|265755584|ref|ZP_06090205.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|345516624|ref|ZP_08796113.1| hypothetical protein BSEG_03084 [Bacteroides dorei 5_1_36/D4]
gi|423232236|ref|ZP_17218637.1| hypothetical protein HMPREF1063_04457 [Bacteroides dorei
CL02T00C15]
gi|423241855|ref|ZP_17222966.1| hypothetical protein HMPREF1065_03589 [Bacteroides dorei
CL03T12C01]
gi|423242747|ref|ZP_17223823.1| hypothetical protein HMPREF1064_00029 [Bacteroides dorei
CL02T12C06]
gi|229436866|gb|EEO46943.1| hypothetical protein BSEG_03084 [Bacteroides dorei 5_1_36/D4]
gi|263234190|gb|EEZ19783.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|392624537|gb|EIY18617.1| hypothetical protein HMPREF1063_04457 [Bacteroides dorei
CL02T00C15]
gi|392640383|gb|EIY34184.1| hypothetical protein HMPREF1065_03589 [Bacteroides dorei
CL03T12C01]
gi|392647190|gb|EIY40894.1| hypothetical protein HMPREF1064_00029 [Bacteroides dorei
CL02T12C06]
Length = 216
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 81/162 (50%), Gaps = 8/162 (4%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
KA+ +++ ++VG+D E +P++ +G +KV+++QI++ + F+F L ++ +PD L
Sbjct: 35 EKAVAYLKDQRIVGVDTETRPSFKRGT-THKVALLQISTQDTCFLFRLNRIG--MPDSLQ 91
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLA 445
L LK+G + + D L ++ L D F L +
Sbjct: 92 EFLM-----SDTLKIGLSLKDDFNSLRKRENVHPDRGNWIELQDYVGRFGIADRSLQKIF 146
Query: 446 EKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
+ ++K++R SNWE LS+ Q YAA DA ++I++
Sbjct: 147 ANLFDQKISKSQRLSNWEADVLSEGQKLYAATDAWACVEIYN 188
>gi|409078182|gb|EKM78546.1| hypothetical protein AGABI1DRAFT_76197 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 415
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 87/185 (47%), Gaps = 26/185 (14%)
Query: 332 IEGC--KVVGIDCEWKPNYV--KGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSC 387
IEG V +D EW N+ G + KVS++QIA ++ V + I P S
Sbjct: 119 IEGLCPGAVAMDLEWMVNFSGSAGQRERKVSVVQIADNKGVILVIQINNMRRFP----SR 174
Query: 388 LTRILQSPGILKLGYNFQCDIKQLAHSYG----ELECFKHYEMLLDIQNVFKEPKGGLSG 443
L ++++P + K+G N D K+L YG L + +++D V K L+
Sbjct: 175 LQALIENPDVAKVGVNILNDGKKLFRDYGILAKNLVELGSFALIVDPSPVAKRKIVSLAK 234
Query: 444 LAE----KILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH------HVRSCS 493
L E +IL G R SNWE +PLS+ Q EYAA DA L +++ + SCS
Sbjct: 235 LVEHYCQRILEKG---EERISNWE-KPLSKKQQEYAANDAHSSLMVYNELLILSRIYSCS 290
Query: 494 QPTDV 498
DV
Sbjct: 291 LEGDV 295
>gi|157133260|ref|XP_001656205.1| 3-5 exonuclease [Aedes aegypti]
gi|108870910|gb|EAT35135.1| AAEL012690-PA [Aedes aegypti]
Length = 771
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 331 HIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDE-MVFIFDLIKLAEDVPDVLDSCLT 389
H +V+G DCEW + K + V+++Q+A+ + + L ++ P+ L
Sbjct: 65 HCREFRVLGFDCEW---VNEQGKRHPVALLQLATHRGLCALIRLCEMKRIPPE-----LG 116
Query: 390 RILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE---PKG-GLSGLA 445
+L P I+K+G D K L H Y E LD++++ P G++ LA
Sbjct: 117 ELLNDPAIVKVGVGPLEDAKLLRHDYN-----LKVESTLDLRHLADRCGVPGPYGMAKLA 171
Query: 446 EKILGAGLNK--TRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
EK LG L+K R SNWE L++ Q++YAA DA V +++F
Sbjct: 172 EKTLGVKLDKHWRIRASNWENAQLTERQIQYAASDAHVAVELF 214
>gi|426194182|gb|EKV44114.1| hypothetical protein AGABI2DRAFT_209861 [Agaricus bisporus var.
bisporus H97]
Length = 415
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 87/185 (47%), Gaps = 26/185 (14%)
Query: 332 IEGC--KVVGIDCEWKPNYV--KGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSC 387
IEG V +D EW N+ G + KVS++QIA ++ V + I P S
Sbjct: 119 IEGLCPGAVAMDLEWMVNFSGSAGQRERKVSVVQIADNKGVILVIQINNMRRFP----SR 174
Query: 388 LTRILQSPGILKLGYNFQCDIKQLAHSYG----ELECFKHYEMLLDIQNVFKEPKGGLSG 443
L ++++P + K+G N D K+L YG L + +++D V K L+
Sbjct: 175 LQALIENPDVAKVGVNILNDGKKLFRDYGILAKNLVELGSFALIVDPSPVAKRKIVSLAK 234
Query: 444 LAE----KILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH------HVRSCS 493
L E +IL G R SNWE +PLS+ Q EYAA DA L +++ + SCS
Sbjct: 235 LVEHYCQRILEKG---EERISNWE-KPLSKKQQEYAANDAHSSLMVYNELLILSRIYSCS 290
Query: 494 QPTDV 498
DV
Sbjct: 291 LEGDV 295
>gi|393911852|gb|EFO26611.2| hypothetical protein LOAG_01867 [Loa loa]
Length = 925
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 45/198 (22%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRI 391
IE ++GID EWKP ++ C +V++ QI ++ D+I L EDV + T+
Sbjct: 424 IEEADLIGIDTEWKPLFM--CTSERVALFQICVRRCSYLVDVITL-EDV--LTKEQWTQF 478
Query: 392 LQ-----SPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGG------ 440
+ SP I KLG++F D++ L S+ L+ + + ++ + + K
Sbjct: 479 FKALFSDSPAI-KLGFDFLNDLRVLHASFPYLQPLEEMKNVICVLKLVKNLLTSNPAFLD 537
Query: 441 ----------------------------LSGLAEKILGAGLNKTRRNSNWEQRPLSQNQL 472
L+ L + +LG L+KT + NW RPL + Q+
Sbjct: 538 FGHSANLSLSSRNENLLDAVSDETVHFRLTDLCQMVLGEALDKTEQIGNWAMRPLRREQM 597
Query: 473 EYAALDAVVLLQIFHHVR 490
+YAA+D LL ++ ++
Sbjct: 598 KYAAMDGYCLLDLYDKLK 615
>gi|405977154|gb|EKC41618.1| Exonuclease 3'-5' domain-containing protein 2 [Crassostrea gigas]
Length = 860
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 85/169 (50%), Gaps = 16/169 (9%)
Query: 329 ICHI---EGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEM-VFIFDLIKLAEDVPDVL 384
CH + KV+G+DCEW + G + VS++Q+A+ + + L K++E VP+
Sbjct: 300 FCHRILKQNIKVIGLDCEWVSH---GKRALPVSLLQVATPKGDCGLVRLSKMSE-VPE-- 353
Query: 385 DSCLTRILQSPGILKLGYNFQCDIKQLAHSYGEL--ECFKHYEMLLDIQNVFKEPKGGLS 442
L +I+Q ILK+G D K+L YG C +L ++ +F L
Sbjct: 354 --SLHQIMQDRSILKVGVAVVDDGKKLGRDYGITVQGCVDLRYVLARVRGIFNVKTESLR 411
Query: 443 GLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
+ +++L + K R NWE ++ Q++YAA DA+V + IF H+
Sbjct: 412 EITKEVLDVVIEKDAAVRRGNWEAETYTEAQIDYAAKDALVGVDIFTHL 460
>gi|242054351|ref|XP_002456321.1| hypothetical protein SORBIDRAFT_03g033960 [Sorghum bicolor]
gi|241928296|gb|EES01441.1| hypothetical protein SORBIDRAFT_03g033960 [Sorghum bicolor]
Length = 210
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 86/181 (47%), Gaps = 19/181 (10%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNY-VKGCKMNKVSIMQIASDEMVFIFDLIKL 376
W++E +H+ H+ +VG+D EW+P V G V+++QI D +F +++
Sbjct: 38 WLEETYRIHRRCRHM---LIVGLDVEWRPAAPVPG----PVAVLQICVDRRCLVFQILR- 89
Query: 377 AEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE 436
A+ VPD L + L +G + D +L YG LE + ++ +
Sbjct: 90 ADYVPDAL----SDFLADRRFTFVGVGIRDDAAKLRDGYG-LEVPRTVDLRRLAARTLGK 144
Query: 437 P---KGGLSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
P + GL L ++LG + K R S W++R LS+ Q +YA DA +++ + +
Sbjct: 145 PDLRRAGLQRLVWEVLGVQMEKPHHVRVSAWDKRKLSKAQFKYACADAFASMEVGQELYT 204
Query: 492 C 492
C
Sbjct: 205 C 205
>gi|312068949|ref|XP_003137453.1| hypothetical protein LOAG_01867 [Loa loa]
Length = 911
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 45/198 (22%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRI 391
IE ++GID EWKP ++ C +V++ QI ++ D+I L EDV + T+
Sbjct: 410 IEEADLIGIDTEWKPLFM--CTSERVALFQICVRRCSYLVDVITL-EDV--LTKEQWTQF 464
Query: 392 LQ-----SPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGG------ 440
+ SP I KLG++F D++ L S+ L+ + + ++ + + K
Sbjct: 465 FKALFSDSPAI-KLGFDFLNDLRVLHASFPYLQPLEEMKNVICVLKLVKNLLTSNPAFLD 523
Query: 441 ----------------------------LSGLAEKILGAGLNKTRRNSNWEQRPLSQNQL 472
L+ L + +LG L+KT + NW RPL + Q+
Sbjct: 524 FGHSANLSLSSRNENLLDAVSDETVHFRLTDLCQMVLGEALDKTEQIGNWAMRPLRREQM 583
Query: 473 EYAALDAVVLLQIFHHVR 490
+YAA+D LL ++ ++
Sbjct: 584 KYAAMDGYCLLDLYDKLK 601
>gi|395761651|ref|ZP_10442320.1| 3'-5' exonuclease [Janthinobacterium lividum PAMC 25724]
Length = 215
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 80/153 (52%), Gaps = 8/153 (5%)
Query: 338 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGI 397
+G D E KP +VKG ++Q+A+D++ ++F + P + + L IL+S
Sbjct: 42 IGFDTESKPTFVKGESSTGPHLIQLATDDIAYLFQV----GSAPALALAELKAILESTTT 97
Query: 398 LKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTR 457
+K+G+ D+K+L + G + + ++ + ++ + G + +A K G L K++
Sbjct: 98 IKVGFGLSDDVKRLRNKLG-IAPAQVLDLSVALRGGQRNDLGAKTAVA-KFFGLHLQKSK 155
Query: 458 R--NSNWEQRPLSQNQLEYAALDAVVLLQIFHH 488
+ +NW L++ Q+ YAA DA V L+++
Sbjct: 156 KISTTNWATSRLTEKQILYAADDAQVALRVYRR 188
>gi|242048348|ref|XP_002461920.1| hypothetical protein SORBIDRAFT_02g010640 [Sorghum bicolor]
gi|241925297|gb|EER98441.1| hypothetical protein SORBIDRAFT_02g010640 [Sorghum bicolor]
Length = 505
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 89/202 (44%), Gaps = 58/202 (28%)
Query: 337 VVGIDCEWKPNYVKGC-------------------------KMNKVSIMQIA-------- 363
VV +D EWKP +G K V+++Q+A
Sbjct: 37 VVALDAEWKPRR-RGSPAAAAPAALGDGSTSLALEASPAPPKFPTVTLLQVACRFGDGSE 95
Query: 364 -SDEMVFIFDL--IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY-GELE 419
VF+ DL + LA+ L + L + + P LKLG+ F+ D+ L+ ++ L
Sbjct: 96 GERSEVFVVDLLSVPLAD-----LWAPLRELFERPDALKLGFRFKQDLVYLSATFSAALG 150
Query: 420 C---FKHYEMLLDIQNVFKEPKG------------GLSGLAEKILGAGLNKTRRNSNWEQ 464
C F E LD+ N++ KG L+ + E++L L+K + S+W
Sbjct: 151 CDSGFDRVEPFLDVTNIYYYLKGHDRQKKLPKETKSLATICEELLSVFLSKELQCSDWSC 210
Query: 465 RPLSQNQLEYAALDAVVLLQIF 486
RPLS+ Q++YAA DA LL IF
Sbjct: 211 RPLSEGQIQYAASDAYYLLGIF 232
>gi|388504098|gb|AFK40115.1| unknown [Lotus japonicus]
Length = 209
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 72/163 (44%), Gaps = 20/163 (12%)
Query: 338 VGIDCEWKPNYVKGCKMNKVSIMQIASD-EMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
+G D EW+P++V+G KV++MQI D + LI + L +L+ P
Sbjct: 44 IGFDIEWRPSFVRGVPPGKVAVMQICGDTSHCHVLHLIHSG------IPQNLQLLLEDPT 97
Query: 397 ILKLGYNFQCDIKQLAHSYG------ELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILG 450
LK+G D ++ Y E F E L N K GL+ L E +L
Sbjct: 98 FLKVGAGIGSDASKVFRDYNVSVKGVEDLSFHANEKLGGGIN-----KWGLAALTETVLS 152
Query: 451 AGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
L K R NWE LS+ QL+YAA DA ++ +++
Sbjct: 153 KQLKKPNKIRLGNWETPVLSKEQLQYAATDAFASWYLYEAIKN 195
>gi|449678427|ref|XP_004209087.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Hydra magnipapillata]
Length = 637
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 25/173 (14%)
Query: 330 CHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA--EDVPDVLDSC 387
C E VG+DCEW N + + V+++Q++ I+ + +L+ E+ P
Sbjct: 105 CFQENLHFVGLDCEWVSN-----EKSHVALIQLSLGTTCLIYRIPQLSINEEFP----FQ 155
Query: 388 LTRILQSPGILKLGYNFQCDIKQLAHSYG-ELECFKHYEML-------LDIQNVFKEPK- 438
L ++L++P ILK G D+++L HS+G + F +L + +N E K
Sbjct: 156 LKKLLENPKILKFGVAIYEDVRRL-HSHGVAVRGFVDLRILAQRCLPFITTKNSEDENKY 214
Query: 439 --GGLSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
GL L+ K+L L+K+R + SNW LS+ Q+ YAA DA+ L++F+
Sbjct: 215 KGMGLQSLSYKLLNMNLDKSRNIQCSNWHATDLSKEQILYAAKDAIASLEVFY 267
>gi|198423738|ref|XP_002125788.1| PREDICTED: similar to exonuclease 3-5 domain-like 2 [Ciona
intestinalis]
Length = 572
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 86/169 (50%), Gaps = 18/169 (10%)
Query: 325 LHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVL 384
L + + ++ KV+G DCEW K K V+++Q+A+ V + LI+L+ L
Sbjct: 71 LDRFVQELQYAKVIGFDCEWTS---KSGKPQPVALLQLATVSGVCL--LIRLSH-YRGPL 124
Query: 385 DSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV---FKEPKG-- 439
L IL +K+G D +L H YG + +D++++ KE K
Sbjct: 125 PVRLQSILSDASYIKVGVGPMEDANKLLHDYGIV-----VSGCVDLRSLAVRTKETKNSL 179
Query: 440 GLSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
GL GLA+ LG +NK + + S W+ LSQ Q++YAA DA++ ++F
Sbjct: 180 GLKGLAQSYLGVTMNKQKHIQCSAWDAPSLSQEQIDYAANDALIAAKVF 228
>gi|91788599|ref|YP_549551.1| 3'-5' exonuclease [Polaromonas sp. JS666]
gi|91697824|gb|ABE44653.1| 3'-5' exonuclease [Polaromonas sp. JS666]
Length = 198
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 19/167 (11%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
KA+ + G +G D E +P + K + I+Q+++ E +IF L +D
Sbjct: 38 KALEELAGTAALGFDTESRPTFAKNEASDGPHIVQLSTLEKAYIFQL----QDAD--CRR 91
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKG-----GL 441
+ +++SP I+K G+ D ++L +G + +LD+ VF++ KG G+
Sbjct: 92 AVAMLMESPAIIKAGFGLGDDRRRLISKFG-----VDPQGVLDLNTVFRK-KGYRKDMGV 145
Query: 442 SGLAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIF 486
G + K+R+ SNW LS Q+ YAA DA L++F
Sbjct: 146 RGAVAVVFNKRFIKSRKATTSNWANSKLSDAQIIYAANDAYAALRVF 192
>gi|341877730|gb|EGT33665.1| hypothetical protein CAEBREN_26343 [Caenorhabditis brenneri]
Length = 790
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 94/184 (51%), Gaps = 17/184 (9%)
Query: 320 DEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAED 379
++++ L + +E +G D E+KP ++ ++++IMQ+ ++ F+ D ++L +
Sbjct: 431 EQLENLCSELDTVEEGVFIGYDSEFKPFHLVDTLKSRMAIMQLFFNKRAFLIDWVELENN 490
Query: 380 VPD--VLDSCLTRILQSPGILKLGYNFQCD------IKQLAHSYGELE-----CFKHYEM 426
D ++ + S + +G++ + D ++ + Y + C K +
Sbjct: 491 SVDDKLVKKFFESLFMSKKLKVIGFDIKNDMEALFTVRAIKDDYKPEDIKNAICVKRFAD 550
Query: 427 LLDIQNV----FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVL 482
+L+ N ++ ++ L E ++G ++K+ + NW+ RPL +NQ+ YAALDAV +
Sbjct: 551 ILNDLNPKILNMEKRTSKMAVLVENLIGWKMDKSEQCGNWQARPLRKNQIVYAALDAVAV 610
Query: 483 LQIF 486
+++F
Sbjct: 611 VELF 614
>gi|258648581|ref|ZP_05736050.1| 3'-5' exonuclease domain protein [Prevotella tannerae ATCC 51259]
gi|260851360|gb|EEX71229.1| 3'-5' exonuclease domain protein [Prevotella tannerae ATCC 51259]
Length = 201
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 94/188 (50%), Gaps = 19/188 (10%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
D+ + ++ + +A+ + +++GID E +P++ KG ++KV+++Q+A++++ +F L
Sbjct: 24 DVKVIQRIEDVTQAVEQLSSSEILGIDTETRPSFRKGT-IHKVALLQVANEDLCCLFQLS 82
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLA--HSYGELECFKHYEMLLDIQN 432
PD L +L + I K+G + + D L+ H + C +D+Q+
Sbjct: 83 CFGF-APD-----LIHLLSNKAIKKVGLSLKDDFFMLSKRHKFDPQNC-------VDLQD 129
Query: 433 VFKE---PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
KE L L + ++K+ + SNWE +Q+Q YAA DA L+++ +
Sbjct: 130 YVKEMGIKDMSLQKLFANVFHQRISKSAQLSNWEAPIYTQSQKLYAATDAYACLKLYKEL 189
Query: 490 RSCSQPTD 497
+ + D
Sbjct: 190 KRLKETND 197
>gi|390337133|ref|XP_791289.2| PREDICTED: probable exonuclease mut-7 homolog [Strongylocentrotus
purpuratus]
Length = 508
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Query: 314 EDIIWVDEVDGLHKAICHIEGCK--VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIF 371
E II V G+ + + I + +VGID EW+P++ K +KV++ QIA+ E ++
Sbjct: 399 ERIILVSTATGIQQCLADITSKQNPMVGIDMEWRPSFSPTQK-SKVALCQIATHETAYLL 457
Query: 372 DLIKL-AEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECF 421
D+ L + D++ ++LQS ILKLG+ D K L HS+ + F
Sbjct: 458 DMTALWVSETKDIVKDFFQQLLQSEEILKLGFEISGDYKNLGHSFPDSRNF 508
>gi|410621252|ref|ZP_11332101.1| 3'-5' exonuclease [Glaciecola pallidula DSM 14239 = ACAM 615]
gi|410159256|dbj|GAC27475.1| 3'-5' exonuclease [Glaciecola pallidula DSM 14239 = ACAM 615]
Length = 212
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 322 VDGLHKA---ICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAE 378
V +HKA I HI V+G D E KP + KG ++QI++ E VF+F
Sbjct: 26 VSDIHKAKLAIEHISEYAVLGFDTESKPCFSKGEISTGPHLIQISTLEKVFLF-----PA 80
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK-EP 437
+V + ++ L IL++ I K+G+ + D L+ +G ++ ++ IQ K E
Sbjct: 81 EVTEAVN-LLLPILENVHIKKVGFGLKADSVLLSRKFG-IDIAGTIDLANSIQRRLKLEN 138
Query: 438 KGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDA 479
G IL L+K + SNW RPL+ Q++YA+ DA
Sbjct: 139 TIGARNSVAMILRKKLSKIVQMSNWSARPLNPKQIQYASNDA 180
>gi|222628416|gb|EEE60548.1| hypothetical protein OsJ_13896 [Oryza sativa Japonica Group]
Length = 166
Score = 63.2 bits (152), Expect = 3e-07, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 337 VVGIDCEWKPNY-VKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG+D EW+P V G V+++Q+ D +F ++ A+ VPD L +R L P
Sbjct: 10 VVGLDVEWRPAAPVPG----PVAVLQLCVDRRCLVFQILH-ADYVPDAL----SRFLADP 60
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEP---KGGLSGLAEKILGAG 452
+G + D +L YG LE + ++ + P + GL L +++G
Sbjct: 61 RFTFVGVGVRDDAARLRVGYG-LEVPRAVDLRALAADTLGRPDLRRAGLRALVREVMGVQ 119
Query: 453 LNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCS 493
++K R S W++R LS++Q +YA DA ++ + +C+
Sbjct: 120 MDKPHHVRVSAWDKRNLSEDQFKYACADAFASREVGRRLYTCN 162
>gi|282860304|ref|ZP_06269373.1| 3'-5' exonuclease [Prevotella bivia JCVIHMP010]
gi|424899382|ref|ZP_18322924.1| ribonuclease D [Prevotella bivia DSM 20514]
gi|282586901|gb|EFB92137.1| 3'-5' exonuclease [Prevotella bivia JCVIHMP010]
gi|388591582|gb|EIM31821.1| ribonuclease D [Prevotella bivia DSM 20514]
Length = 225
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 91/185 (49%), Gaps = 15/185 (8%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
I+ V +G A+ ++ ++GID E +P++ KG + +KV+++Q+++ E+ F+F L
Sbjct: 26 IVVVKTAEGASAAVDYLLQSDILGIDTETRPSFKKGIR-HKVALLQVSTREVCFLFRL-- 82
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK 435
++ + DS + R+L+ + K+G + D + L FK +D+Q+ K
Sbjct: 83 ---NIIGITDSII-RLLEDTSVPKIGLSLHDDFRMLNKRV----TFKP-GYFIDLQDYVK 133
Query: 436 E---PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSC 492
+ L L + G + K + +NWE L+ Q YA+ DA + ++ ++
Sbjct: 134 DLGIHDLSLQKLYANVFGEKIVKREQLTNWENTELTDKQKRYASTDAWTCINLYLKMKEL 193
Query: 493 SQPTD 497
+ D
Sbjct: 194 KETGD 198
>gi|387152866|ref|YP_005701802.1| 3'-5' exonuclease [Desulfovibrio vulgaris RCH1]
gi|311233310|gb|ADP86164.1| 3'-5' exonuclease [Desulfovibrio vulgaris RCH1]
Length = 201
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 15/172 (8%)
Query: 325 LHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVL 384
L A+ + V+G D E +P + KG K+N S++Q+A ++V++ L VP L
Sbjct: 38 LADALDVLRSDSVLGFDTETRPTFRKG-KVNLPSLVQLACADVVYLIQL----NWVP--L 90
Query: 385 DSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE---PKGGL 441
L +L P I+K G + DI+ L Y F+ ++ D+ V ++ GL
Sbjct: 91 GEMLADLLSDPAIIKTGVAVRDDIRDLQKLY----AFRDGGVV-DLGEVARDLGLETHGL 145
Query: 442 SGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCS 493
LA LG ++K + SNW R L Q+ YAA DA V +I +R+
Sbjct: 146 RNLAANFLGIRISKGAQCSNWSNRELGPQQVVYAATDAWVSREIHISMRNLG 197
>gi|46579495|ref|YP_010303.1| 3' exoribonuclease [Desulfovibrio vulgaris str. Hildenborough]
gi|120602955|ref|YP_967355.1| 3'-5' exonuclease [Desulfovibrio vulgaris DP4]
gi|46448909|gb|AAS95562.1| 3'- 5' exonuclease domain protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|120563184|gb|ABM28928.1| 3'-5' exonuclease [Desulfovibrio vulgaris DP4]
Length = 202
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 15/172 (8%)
Query: 325 LHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVL 384
L A+ + V+G D E +P + KG K+N S++Q+A ++V++ L VP L
Sbjct: 39 LADALDVLRSDSVLGFDTETRPTFRKG-KVNLPSLVQLACADVVYLIQL----NWVP--L 91
Query: 385 DSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE---PKGGL 441
L +L P I+K G + DI+ L Y F+ ++ D+ V ++ GL
Sbjct: 92 GEMLADLLSDPAIIKTGVAVRDDIRDLQKLY----AFRDGGVV-DLGEVARDLGLETHGL 146
Query: 442 SGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCS 493
LA LG ++K + SNW R L Q+ YAA DA V +I +R+
Sbjct: 147 RNLAANFLGIRISKGAQCSNWSNRELGPQQVVYAATDAWVSREIHISMRNLG 198
>gi|341877604|gb|EGT33539.1| CBN-MUT-7 protein [Caenorhabditis brenneri]
Length = 862
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 99/212 (46%), Gaps = 34/212 (16%)
Query: 338 VGIDCEWKPNYVKGCKM----NKVSIMQIA-------SDE-------MVFIFDLIKL-AE 378
VG D EWKP V K +KV ++ + SD+ +FI + ++
Sbjct: 436 VGFDSEWKPTNVTSNKQLFFADKVWLVDVVELGNANVSDDWWQKFAVKLFIDNKFRIIGF 495
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQC-DIKQLAHSYGELECFKHYEMLLDIQNVFKEP 437
D+ + LD+ LT I LK+ C D+K+LA + C E+L + FK
Sbjct: 496 DMRNDLDAMLT-IPALKNFLKIEKINNCFDLKRLAENI----CDVDMEILELPKKTFK-- 548
Query: 438 KGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
L+ L L L+KT + SNW+ RPL +NQ+ YAALDAVV++ F + + D
Sbjct: 549 ---LADLTLHFLNVTLDKTEQCSNWQCRPLRKNQIIYAALDAVVVVDTFRKIMEITLERD 605
Query: 498 VSEGHDKIEWKSYIVSHMDNPKKSKKRPTIKK 529
S I S +++ PKK K T++K
Sbjct: 606 SSIDMANIVNNSNVLA----PKKEKSSKTVRK 633
>gi|406896263|gb|EKD40613.1| 3'-5' exonuclease [uncultured bacterium]
Length = 289
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 15/170 (8%)
Query: 325 LHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVL 384
L +AI + ++G D E +P Y KG + S++Q+A ++ V++F L L L
Sbjct: 125 LSQAIQALATETILGFDTETRPAYHKG-ESYLPSLLQLAGEKEVYLFQLRHLG------L 177
Query: 385 DSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPK---GGL 441
+ L IL P ++K G D+++L +L FK +D+ + K+ + GL
Sbjct: 178 PAPLREILADPKVVKAGVALAYDLQELH----KLARFKP-AGFVDLGTLAKKAEIKNHGL 232
Query: 442 SGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
GLA +LG + K + SNW + L+ Q++YAA DA V +++ +R
Sbjct: 233 RGLAAVLLGFRIAKGAQTSNWARDVLAPAQIQYAATDAWVGRELYLKLRP 282
>gi|374387211|ref|ZP_09644698.1| hypothetical protein HMPREF9449_03084 [Odoribacter laneus YIT
12061]
gi|373222606|gb|EHP44976.1| hypothetical protein HMPREF9449_03084 [Odoribacter laneus YIT
12061]
Length = 180
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 17/179 (9%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
++I V+E + +A+ ++ +G D E +P + KG + + VS++Q+A+ E V++F L
Sbjct: 12 EVIVVEEAKNVEEAVRYLAAHTCLGFDTETRPAFHKG-ETHPVSLLQLAAPEKVYLFRLN 70
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF 434
K L +L I K+G + DI+ L +L F+ +D+Q F
Sbjct: 71 KCG------FSMALRNLLAEKRIAKIGVGIRDDIRALR----KLGNFQPAS-FIDLQE-F 118
Query: 435 KEPKG----GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
P G S L I ++K +R SNW+ L+ +Q++YAA DA L+++ +
Sbjct: 119 VVPYGIEEKSFSKLMAIIFQVKISKRQRVSNWDAPVLTSSQIKYAATDAWGALRMYEEL 177
>gi|345880256|ref|ZP_08831811.1| hypothetical protein HMPREF9431_00475 [Prevotella oulorum F0390]
gi|343923610|gb|EGV34296.1| hypothetical protein HMPREF9431_00475 [Prevotella oulorum F0390]
Length = 210
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 92/179 (51%), Gaps = 20/179 (11%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
I ++E D KA+ ++ C ++G+D E +P + KG + +KV+++Q+A+ + F+F L
Sbjct: 27 ITIINESDA-DKAVDYLLSCDILGVDTETRPTFKKG-QQHKVALLQVATHDTCFLFRLSD 84
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK 435
+ L + R+L+ I K+G ++ D+ L+ + +D+QN+
Sbjct: 85 IG------LPKSVIRLLEDKQIPKVGLSWHDDLLSLSKREKFTPGY-----FIDLQNLVG 133
Query: 436 EPKGGLSGLAEKILGAGL-----NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
G+ L+ + + A L +K +R +NWE L++ Q +YAA DA + ++ +
Sbjct: 134 TL--GIKDLSLQKIYANLFHQKISKRQRLTNWEADVLNEKQKQYAATDAWTCINLYEEI 190
>gi|346470423|gb|AEO35056.1| hypothetical protein [Amblyomma maculatum]
Length = 609
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 90/200 (45%), Gaps = 20/200 (10%)
Query: 304 RFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIA 363
R K +V + EV+ L +CH VVG+DCEW V C+ N V+++Q+A
Sbjct: 44 RLFTSKVVVCSSLEEFKEVEELFLKLCHESS--VVGLDCEWVS--VGKCRRN-VALLQLA 98
Query: 364 -SDEMVFIFDLIKLAED---------VPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAH 413
S + + + K+ D +P DS L +L I+K+G D +L H
Sbjct: 99 PSRDFSVLLRICKMFPDAAGGMRGQCLPGFPDS-LRDLLDDYCIVKVGVAICDDSYKLFH 157
Query: 414 SYG--ELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILG--AGLNKTRRNSNWEQRPLSQ 469
YG C +L + P GL A ILG A +K S+WE LS
Sbjct: 158 DYGLSVRGCLDLRHVLRLFPELNGYPVAGLKTQARTILGVQADTSKVHTCSDWEADALSS 217
Query: 470 NQLEYAALDAVVLLQIFHHV 489
Q++YAA D ++ +QIF +
Sbjct: 218 AQVDYAASDVILSVQIFDQI 237
>gi|348578015|ref|XP_003474779.1| PREDICTED: Werner syndrome ATP-dependent helicase-like [Cavia
porcellus]
Length = 1486
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 16/175 (9%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
V+G D EW P Y KG K+++V+++Q+ S+ ++F + ++ V L +L++
Sbjct: 78 VIGFDMEWPPTYSKG-KLSRVALIQLCVSESKCYLFHISSMS-----VFPQGLKMLLENE 131
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQN--VFKEPKGGLSGLAEKILGAGL 453
I K G + D +L + K + L D+ N + L+GL + + G L
Sbjct: 132 AIKKAGVGIEGDQWKLLRDFDIK--LKSFVELTDVANQKLKSTEIWSLNGLVKHLFGKQL 189
Query: 454 --NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCS---QPTDVSEGHD 503
+K+ R SNW PLS++Q YAA DA L I+ + S S Q D ++G +
Sbjct: 190 LKDKSVRCSNWSNFPLSEDQKLYAATDAYAGLIIYQKLESLSDAVQRFDTNKGEE 244
>gi|395849609|ref|XP_003797414.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 [Otolemur
garnettii]
Length = 625
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 108/234 (46%), Gaps = 16/234 (6%)
Query: 286 SLEGFLKTREPEAGFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWK 345
S E L + P A + R L K + V D ++ L ++ +E V+GIDCEW
Sbjct: 59 SEESQLSSTAPRASW-EKRLLEAKVVTVSQEAEWDHIEPLLRS--ELEDFPVLGIDCEWV 115
Query: 346 PNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV--PDVLDSCLTRILQSPGILKLGYN 403
++G K N +S++Q+AS + + L++L + + L L +L ILK+G
Sbjct: 116 --NLEG-KANPLSLLQMASPSGLCV--LVRLPKLICGGKTLPRTLLDVLADGTILKVGVG 170
Query: 404 FQCDIKQLAHSYGEL--ECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTR--RN 459
D +L YG + C + L +N L LAE +L L+K+ R
Sbjct: 171 CSEDASKLLQDYGLVVRGCLDLRYLALRQRNNLLCNGLSLKSLAETVLNFPLDKSLLLRC 230
Query: 460 SNWEQRPLSQNQLEYAALDAVVLLQIFHHV--RSCSQPTDVSEGHDKIEWKSYI 511
SNW+ L+ +Q+ YAA DA + + +F H+ S+ + V D W+ +
Sbjct: 231 SNWDAETLTDDQVTYAARDAQISVALFLHLLGYPFSRNSPVETNDDHSAWRRVL 284
>gi|359689033|ref|ZP_09259034.1| ribonuclease D [Leptospira licerasiae serovar Varillal str.
MMD0835]
Length = 372
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 27/167 (16%)
Query: 328 AICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSC 387
A+ + + ID E Y +KV ++QI+S +IFD I+L +D+ +
Sbjct: 2 ALITLSQSDCLSIDTESSGYY---TYYSKVCLIQISSKGKNYIFDPIRL-DDL-----NG 52
Query: 388 LTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEM--------LLDIQNVFKEPKG 439
L + ++P ILK+ ++ DIK L +G FK + LLD++ +
Sbjct: 53 LGPLFENPNILKIFHSASDDIKALKRDFG----FKFINIADTMFSSRLLDLE------QN 102
Query: 440 GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
L L E L+K + SNWE+RPL ++QL+YAALD V L I+
Sbjct: 103 SLLYLVEHYHKVKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLESIW 149
>gi|376297792|ref|YP_005169022.1| 3'-5' exonuclease [Desulfovibrio desulfuricans ND132]
gi|323460354|gb|EGB16219.1| 3'-5' exonuclease [Desulfovibrio desulfuricans ND132]
Length = 204
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 84/173 (48%), Gaps = 10/173 (5%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
+I+ V L +A+ + ++G D E +P + KG K S++Q+A+ E ++F L
Sbjct: 32 NILVVRTESDLEQALSGMRASSLLGFDTETRPVFKKGKKPGPPSLLQLATAECAYVFQLG 91
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLA-HSYGELECFKHYEMLLDIQNV 433
L LD + IL + ILK G + DI L H+ + F L I
Sbjct: 92 VLP------LDKGVCDILANRRILKTGVAVRDDILGLQKHARFKPSGFVD---LSSITAK 142
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
+ GL +A +LG ++K+ + SNW + LS+ Q+ YAA DA + +++
Sbjct: 143 YNLQTHGLRNMAANLLGFRISKSAQCSNWAKDKLSRQQVLYAATDAWISRELY 195
>gi|291514664|emb|CBK63874.1| Ribonuclease D [Alistipes shahii WAL 8301]
Length = 202
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
V+G D E +P++ G +VS++Q+++ + ++F L K+ P + ++L+
Sbjct: 49 VIGFDTETRPSFRPGVTF-RVSLLQLSTPTVCYLFRLNKIPLAKP------ILQLLEDRR 101
Query: 397 ILKLGYNFQCDIKQLAHSYGELECFKHYE--MLLDIQNVFKEPKGG---LSGLAEKILGA 451
ILK+G + D++ L +H+ +D+Q + E G L L+ +LG
Sbjct: 102 ILKIGADVAGDLRSLRQ-------IRHFRDGGFVDLQGIAPEWGIGEKSLRKLSAIVLGR 154
Query: 452 GLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHH-VRSCSQP 495
++K +R SNWE L+ Q YAA DA V +I+ +R+ +P
Sbjct: 155 RVSKAQRLSNWEAATLTDKQQLYAATDAWVCTRIYEQLLRTPKKP 199
>gi|328698648|ref|XP_001946371.2| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Acyrthosiphon pisum]
Length = 522
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 17/160 (10%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
++G+DCEW + V+++QIA + + LI+L++ + S L+ IL +
Sbjct: 59 ILGLDCEW---VTQNGIRQPVALLQIADNNG--MCSLIRLSK--FKTIPSSLSDILSNSN 111
Query: 397 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEP---KGGLSGLAEKILGAGL 453
I+K+G D L + Y + +D++ + KE + LS LA K+LG L
Sbjct: 112 IIKVGVAILDDAHLLMNDYN-----INVSGCIDLRYLAKESCLEERSLSALAFKLLGCEL 166
Query: 454 NKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
+K R S+WE L+ Q EYAALDA V ++IF +R+
Sbjct: 167 DKDWHVRASDWEAEELNDRQTEYAALDAYVAVKIFEQLRN 206
>gi|298705697|emb|CBJ28935.1| similar to Werner syndrome protein [Ectocarpus siliculosus]
gi|299115153|emb|CBN75519.1| similar to Werner syndrome protein [Ectocarpus siliculosus]
Length = 727
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 9/147 (6%)
Query: 330 CHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIA-SDEMVFIFDLIKLAEDVPDV-LDSC 387
C ++G V+G+DCEW+P+ + G N VS +Q++ D + F L + +
Sbjct: 108 CQLQG-NVLGLDCEWEPS-LAGTTPNPVSTVQLSLPDGTAYCFQLQRGNKKTTSSNFPKA 165
Query: 388 LTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE-PKGGLSGLAE 446
L +L++P I K+G N D L YG +E ++ + + E P L+G+A
Sbjct: 166 LQNLLENPSIAKVGVNINSDATYLERDYG-IEVANTVDLRTYARQCWVETPSRSLAGMAS 224
Query: 447 KILGAGLNKTR--RNSNWEQRPLSQNQ 471
+LG L K R+S W PLS NQ
Sbjct: 225 SLLGRQLPKDPVIRSSRWSS-PLSDNQ 250
>gi|225450559|ref|XP_002277541.1| PREDICTED: Werner Syndrome-like exonuclease-like [Vitis vinifera]
Length = 208
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 20/178 (11%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
WV E+ ++ VVG+D EW+PN + NK + +Q+ + I L +
Sbjct: 40 WVQEILSIYAG-----KPMVVGLDIEWRPNRIPSMS-NKSATLQLCINNKCLILQLFYMD 93
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEM-LLDIQ---NV 433
E +P L L +G DI +L + YG LEC ++ +L +Q
Sbjct: 94 E-IPQSLKG----FLLDSNFTFVGVEVGADIDKLKNEYG-LECSCSADVRILAMQRWPGR 147
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
F+ P GL LA +++ + K + SNWE R L++NQ+EYA +DA +I H +
Sbjct: 148 FRRP--GLKDLAWEVVNLRMKKPKHVCMSNWEARVLNENQVEYACIDAYASYRIGHKL 203
>gi|404486095|ref|ZP_11021289.1| hypothetical protein HMPREF9448_01716 [Barnesiella intestinihominis
YIT 11860]
gi|404337423|gb|EJZ63877.1| hypothetical protein HMPREF9448_01716 [Barnesiella intestinihominis
YIT 11860]
Length = 211
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 91/179 (50%), Gaps = 13/179 (7%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
II +D A+ + K++G D E +P + KG K N V+++Q+++ + ++F + +
Sbjct: 28 IIVIDNERAADNAVLQLNNEKIIGFDTETRPTFKKG-KSNHVALIQLSTHDTCYLFRINR 86
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAH-SYGEL--ECFKHYEMLLDIQN 432
+ + +L++ +LK+G + + D L+ + G+ F + + N
Sbjct: 87 IG------FTPAIKNLLENESLLKVGISLKDDFCMLSRLNSGQFIPRNFIELQKFVKKYN 140
Query: 433 VFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
+ + + G+ ++G ++K +R SNWE L++NQ YAA DA ++I+ ++S
Sbjct: 141 IEDQSLQKIYGI---VIGKKISKGQRLSNWEADHLTENQQLYAATDAWSCIKIYEVLKS 196
>gi|212558246|gb|ACJ30700.1| 3'-5' exonuclease [Shewanella piezotolerans WP3]
Length = 294
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 19/187 (10%)
Query: 323 DGLHKAICHIEGCKVVGIDCEWKPNYVKGCK-MNKVSIMQIASDEMVFIFDLIKLAEDVP 381
D L AI I + +G D E + KG + N VS++QIA+ ++F ++ +V
Sbjct: 100 DTLAAAITDINAQQWIGFDTETAATFEKGRRNSNPVSLIQIATASHCYLFRMV--GRNV- 156
Query: 382 DVLDSCLTRIL-QSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE---- 436
+ + L +L + ILKLG + D+ + + + +LD+ + +
Sbjct: 157 SIFKAALAEVLSEQSNILKLGIGLRSDVNAMKRDFNIV-----LSPMLDLNWLMNQLGAA 211
Query: 437 PKGGLSGLAEKILGAGLNKTRRN--SNWE---QRPLSQNQLEYAALDAVVLLQIFHHVRS 491
+ G +A +L L K++R SNW PLS Q+ YAA DA+V L I+H + +
Sbjct: 212 KQMGTVQIAASVLSLKLPKSKRVTLSNWALPLDMPLSNEQVLYAATDALVALDIYHGLFA 271
Query: 492 CSQPTDV 498
+P V
Sbjct: 272 QLEPYKV 278
>gi|443693142|gb|ELT94573.1| hypothetical protein CAPTEDRAFT_228908 [Capitella teleta]
Length = 584
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 14/157 (8%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDE-MVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
V+G+DCEW G V+++QIA+ + + L K+ D+P L +L
Sbjct: 90 VLGLDCEWCQKSSFG-----VALLQIATHSGLCLLIRLYKMQADIP----RGLVELLADK 140
Query: 396 GILKLGYNFQCDIKQLAHSYG--ELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGL 453
ILK+G D +L +S+ L C + L D + + L+ LAE+ +G +
Sbjct: 141 KILKVGVAITSDADKLFNSFDLCTLGCVELCN-LADRSRIRMDEGRSLAALAEQTVGLRI 199
Query: 454 NK-TRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
+K R+ NWE LS+ Q+ YAA DA++ ++IF +
Sbjct: 200 DKGVVRSGNWEADVLSEAQVMYAATDALIAVRIFTRL 236
>gi|399216327|emb|CCF73015.1| unnamed protein product [Babesia microti strain RI]
Length = 333
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 87/191 (45%), Gaps = 9/191 (4%)
Query: 345 KPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNF 404
+P++ C M +++QI+ E+ +++L + D L L ++L++P I K+ +
Sbjct: 121 RPSFTANCSMPCPTVIQISGPEVCLVYNLKSMGITADDKLPDSLVQVLKNPNITKVSHG- 179
Query: 405 QCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQ 464
D L Y ++EC + L + L G +G L+KT + SNW+
Sbjct: 180 NSDF-YLLKRYFDVECINTVD-LYRVCVAINSKSRSLQGAVAIYMGLNLDKTLQKSNWDS 237
Query: 465 RPLSQNQLEYAALDAVVLLQIFHHVRS----CSQPTDVSEGHDKIEWKSYIVSHMDNPKK 520
L+++Q++YAA DA + + +R+ P + S E SY +++DN
Sbjct: 238 EQLTEDQIKYAATDAWISREFLISLRARYGLSRLPCETSNQTKTEENASY--TNIDNCLT 295
Query: 521 SKKRPTIKKET 531
K P ++
Sbjct: 296 QTKVPYTNNQS 306
>gi|212692047|ref|ZP_03300175.1| hypothetical protein BACDOR_01542 [Bacteroides dorei DSM 17855]
gi|212665439|gb|EEB26011.1| 3'-5' exonuclease [Bacteroides dorei DSM 17855]
Length = 216
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 81/162 (50%), Gaps = 8/162 (4%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
KA+ +++ ++VG+D E +P++ +G +KV+++QI++ + F+F L ++ +P+ L
Sbjct: 35 EKAVAYLKDQRIVGVDTETRPSFKRGT-THKVALLQISTQDTCFLFRLNRIG--MPNSLQ 91
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLA 445
L LK+G + + D L ++ L D F L +
Sbjct: 92 EFLM-----SDTLKIGLSLKDDFNSLRKRENVHPDRGNWIELQDYVGRFGIADRSLQKIF 146
Query: 446 EKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
+ ++K++R SNWE LS+ Q YAA DA ++I++
Sbjct: 147 ANLFDQKISKSQRLSNWEADVLSEGQKLYAATDAWACVEIYN 188
>gi|390945448|ref|YP_006409208.1| ribonuclease D [Alistipes finegoldii DSM 17242]
gi|390422017|gb|AFL76523.1| ribonuclease D [Alistipes finegoldii DSM 17242]
Length = 209
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 19/155 (12%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
VVG D E +P++ G +VS++Q+++ ++ F+F L K+ P + ++L++
Sbjct: 55 VVGFDTETRPSFRPGISY-RVSLLQLSTPQLCFLFRLNKIPLAKP------ILQVLETDS 107
Query: 397 ILKLGYNFQCDIKQLAHSYGELECFKHYE--MLLDIQNVFKE---PKGGLSGLAEKILGA 451
ILK+G + D++ L +H+ +D+Q++ E L L+ +L
Sbjct: 108 ILKIGADVAGDLRSLRQ-------IRHFRDGGFVDLQSIAPEWGIEDKSLRKLSAIVLRQ 160
Query: 452 GLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
++K +R SNWE L+ Q YAA DA V I+
Sbjct: 161 RVSKAQRLSNWEAATLTDKQKLYAATDAWVCTAIY 195
>gi|334366675|ref|ZP_08515600.1| 3'-5' exonuclease [Alistipes sp. HGB5]
gi|313157179|gb|EFR56609.1| 3'-5' exonuclease [Alistipes sp. HGB5]
Length = 203
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 19/158 (12%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
VVG D E +P++ G +VS++Q+++ ++ F+F L K+ P + ++L++
Sbjct: 49 VVGFDTETRPSFRPGISY-RVSLLQLSTPQLCFLFRLNKIPLAKP------ILQVLETDS 101
Query: 397 ILKLGYNFQCDIKQLAHSYGELECFKHYE--MLLDIQNVFKE---PKGGLSGLAEKILGA 451
ILK+G + D++ L +H+ +D+Q++ E L L+ +L
Sbjct: 102 ILKIGADVAGDLRSLRQ-------IRHFRDGGFVDLQSIAPEWGIEDKSLRKLSAIVLRQ 154
Query: 452 GLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
++K +R SNWE L+ Q YAA DA V I+ +
Sbjct: 155 RVSKAQRLSNWEAATLTDKQKLYAATDAWVCTAIYDKL 192
>gi|260950129|ref|XP_002619361.1| hypothetical protein CLUG_00520 [Clavispora lusitaniae ATCC 42720]
gi|238846933|gb|EEQ36397.1| hypothetical protein CLUG_00520 [Clavispora lusitaniae ATCC 42720]
Length = 738
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 22/180 (12%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCE---WKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
WVD VD L + I + + ID E ++ Y C +MQI++ E +I D +
Sbjct: 221 WVDTVDALQEMIEALRSSTEIAIDLEHHDYRSYYGITC------LMQISNREQDWIVDTL 274
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF 434
L +D+ D L I +P ILK+ + DI L G + L D +
Sbjct: 275 ALHDDLRD-----LNEIFANPAILKVLHGANMDIIWLQRDLG-----LYIVSLFDTYHAS 324
Query: 435 KE---PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
K+ PK L+ L E +K + ++W RPL+ ++YA D LL I+ +R+
Sbjct: 325 KKLGFPKFSLAYLLENFAHFKTSKKYQLADWRIRPLTDAMMQYARADTHFLLNIYDQLRN 384
>gi|242001434|ref|XP_002435360.1| 3-5 exonuclease, putative [Ixodes scapularis]
gi|215498690|gb|EEC08184.1| 3-5 exonuclease, putative [Ixodes scapularis]
Length = 587
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 80/156 (51%), Gaps = 9/156 (5%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASD-EMVFIFDLIKLAEDVPDV-LDSCLTRILQS 394
V+G+D EW V+G + ++V+++Q+A + + L + E+ V L L IL+
Sbjct: 59 VLGLDSEW--TTVQGHR-HRVALLQLAPNANFSVLLRLCQFTEEASTVTLPESLRDILKD 115
Query: 395 PGILKLGYNFQCDIKQLAHSYG--ELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAG 452
I+K+G D +L YG C L + + PK GL L+E +LG
Sbjct: 116 VKIIKVGVGVIDDAHKLFQDYGIDVWGCLDLRHALGCLPELGHFPKVGLRSLSESLLGVS 175
Query: 453 LNKT--RRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
+K+ R SNWE L++ Q+ YAA DA++ +QIF
Sbjct: 176 PDKSWRLRCSNWEADVLTEKQIRYAADDALLAVQIF 211
>gi|384171974|ref|YP_005553351.1| putative 3'-5' exonuclease [Arcobacter sp. L]
gi|345471584|dbj|BAK73034.1| putative 3'-5' exonuclease [Arcobacter sp. L]
Length = 220
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 25/181 (13%)
Query: 319 VDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAE 378
V+ + L + I+ +G D E KP + KG N V ++Q+A+ + F+ + ++
Sbjct: 33 VNTSEQLENVMNSIQLTPFIGFDSEQKPTFKKGQADNGVCLIQLATKDKCFLIQIKQIKN 92
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEM----LLDIQNVF 434
P L L+ I+K+G + D + L FK + + ++D++++F
Sbjct: 93 LKP------LINFLEDDKIIKIGTGLKGDNEAL---------FKQFNLRVKSMIDLEDIF 137
Query: 435 KEPKG----GLSGLAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFHH 488
K+ G A IL L K++ SNWE + LS Q++YA+ DA V+ +
Sbjct: 138 KKLSSKNQIGAKKAASIILNKKLQKSKNMSRSNWENKELSSGQIKYASEDATVVYDVMDK 197
Query: 489 V 489
+
Sbjct: 198 I 198
>gi|348687564|gb|EGZ27378.1| hypothetical protein PHYSODRAFT_553959 [Phytophthora sojae]
Length = 588
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQ 494
K + GL+ +AE LG L+K R S+WE+RPL+ QL+YAALDA VL+QI++ ++
Sbjct: 512 KSSRLGLTAIAETYLGLPLDKRARMSDWERRPLTPAQLQYAALDAHVLVQIYYKMQE-QH 570
Query: 495 PTDVSEG 501
P D E
Sbjct: 571 PADAFEA 577
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 9/126 (7%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMN---KVSIMQIASDEMVFIF 371
+II+VD L + H+ +G D EWK ++ ++ K ++MQ+AS E F+
Sbjct: 329 NIIFVDTPAALQACVDHLVTQPAIGFDSEWKAVHISADPVDAPAKCALMQLASREKAFVV 388
Query: 372 DLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKH-YEMLLDI 430
D++ L + L + QS ++KLG++ + D+K L +H ML+D+
Sbjct: 389 DVLALYDH-----GHILAPLFQSDSVVKLGFDTRGDVKALRPFLSGGYATEHVMSMLVDL 443
Query: 431 QNVFKE 436
Q V K+
Sbjct: 444 QAVTKK 449
>gi|71908088|ref|YP_285675.1| 3'-5' exonuclease [Dechloromonas aromatica RCB]
gi|71847709|gb|AAZ47205.1| 3'-5' exonuclease [Dechloromonas aromatica RCB]
Length = 217
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 73/159 (45%), Gaps = 21/159 (13%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
V+G D E KP ++KG ++Q+A+DE VF+ + A L RIL +
Sbjct: 48 VIGFDTESKPTFLKGEVSTGPHLVQLATDEHVFLLPVAFAANH------EVLRRILSAAD 101
Query: 397 ILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDIQNVFKEPKGGLSGLAEKI-----LG 450
ILK+G D L G EL +LD+ + P G + K+ G
Sbjct: 102 ILKVGLGLGNDRSVLRSRLGIELNN------VLDLGEAMRGP-GHRGTVGAKVAVAHYFG 154
Query: 451 AGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
K+++ SNW L++ QL YAA DA V LQ++H
Sbjct: 155 QKFQKSKKVGTSNWANPRLNERQLLYAANDAHVALQLYH 193
>gi|334310653|ref|XP_001378586.2| PREDICTED: exonuclease 3'-5' domain-containing protein 2
[Monodelphis domestica]
Length = 586
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 102/218 (46%), Gaps = 25/218 (11%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDV--LDSCLT 389
+E C V+GIDCEW VKG K VS++Q+AS I LI+L + + L
Sbjct: 64 LEQCPVLGIDCEWV--NVKG-KARPVSLLQMASPTGYCI--LIRLPKLISGEAGFPQTLV 118
Query: 390 RILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE------PKG-GLS 442
+L+ ILK+G D +L Y LD++N+ P G L
Sbjct: 119 DLLEDSRILKVGVGCWEDASKLLREYD-----LTVRGCLDLRNLAMRQRRDLLPNGLSLK 173
Query: 443 GLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSE 500
LAE IL L+K+ R+SNW+ L++ Q+ YAA DA + + +F H+ + ++
Sbjct: 174 FLAETILSFPLDKSPLLRSSNWDAEDLTKEQVAYAARDAQISVALFLHLLEYPLSMNSTQ 233
Query: 501 -GHDKIEWKSYIV---SHMDNPKKSKKRPTIKKETESG 534
G ++ W+ ++ +D P K + +E SG
Sbjct: 234 NGDNETTWEKILMKCQDLVDIPFHGKGNSSNTREENSG 271
>gi|262193925|ref|YP_003265134.1| 3'-5' exonuclease [Haliangium ochraceum DSM 14365]
gi|262077272|gb|ACY13241.1| 3'-5' exonuclease [Haliangium ochraceum DSM 14365]
Length = 925
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 37/183 (20%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
+ +VD+ L +A + G VG+D E + ++Q+A+ E + D
Sbjct: 756 VRYVDQQAALEQACAALLGEPRVGLDVE------TTLFDRALCLVQLAAPEYTVVID--- 806
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF- 434
A V D+ ++ +L S ++K+ +N Q E F+ M DI+NVF
Sbjct: 807 -ARAVDDL--GPVSELLASRAVVKIIHNAQF----------ERSVFRKLGM--DIENVFD 851
Query: 435 ------------KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVL 482
+E GL + + LG L+K + S+W QRPL+Q QL+YAALDA VL
Sbjct: 852 TLKVSRRLRGRKREGGHGLGAVCARELGRELDKHEQRSDWTQRPLTQRQLDYAALDAEVL 911
Query: 483 LQI 485
L +
Sbjct: 912 LAL 914
>gi|313220222|emb|CBY31081.1| unnamed protein product [Oikopleura dioica]
Length = 597
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 94/211 (44%), Gaps = 34/211 (16%)
Query: 335 CKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMV----FIFDLIKLAEDVPDVLDSCLTR 390
C VG+DCEW NK ++MQI+ F+ L K+ D+ + L
Sbjct: 72 CNFVGLDCEW-------VGKNKTALMQISVSTPAGIKCFLIRLCKV--DIRICYE--LMA 120
Query: 391 ILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEM-LLDIQNVFKEPK---GGLSGLAE 446
L+ ++KLG D K+L+ + F + D++ + GGL+ L
Sbjct: 121 FLRDEDVVKLGCGIDGDFKRLSEV--DFVIFHPATISFFDLRQIIPATNYQNGGLANLTR 178
Query: 447 KILGAGLNKTRRN--SNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSE-GHD 503
+ILG LNK R SNWE LS Q YAA DAV LQI + + E G
Sbjct: 179 QILGRKLNKDYRVRCSNWEADTLSNEQKTYAADDAVCALQILGKL--------IQELGES 230
Query: 504 KIEWKSYIVSHMDNPKKSKKRPTIKKETESG 534
++++ +I + + K K +P K+ +SG
Sbjct: 231 RVQY--FINEYKNTVFKQKSKPNKDKKEKSG 259
>gi|388508770|gb|AFK42451.1| unknown [Medicago truncatula]
Length = 311
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 32/226 (14%)
Query: 289 GFLKTREPEAGF----VHSR-FLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCE 343
G LKTR P F ++SR F +++ V + + ++E + + I +G D E
Sbjct: 93 GHLKTRLPVMKFCGKIMYSRTFTDVEKAVTKFLKIIEEK---KRDMIQIP----IGFDIE 145
Query: 344 WKPNYVKGCKMNKVSIMQIASD-EMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGY 402
W+P + +G K ++MQI D + LI + L +L+ +LK+G
Sbjct: 146 WRPTFKRGVPPGKTAVMQICCDTNHCLVLHLIHSG------IPRNLQLLLEDSSVLKVGA 199
Query: 403 NFQCDIKQLAHSYGELECFKHYEMLLDI-----QNVFKEP-KGGLSGLAEKILGAGLNKT 456
D +++ Y F + + D+ Q + P K GL+ L EK+L L K
Sbjct: 200 GIGGDASKVSRDY-----FISIKGVEDLSYHANQKLGGGPNKWGLASLTEKLLSKQLKKP 254
Query: 457 R--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSE 500
R NWE LS+ QLEYAA DA ++ ++ +V++
Sbjct: 255 SKIRMGNWETPYLSKEQLEYAATDAFASWFLYQTIKDLPDAQEVAD 300
>gi|145546781|ref|XP_001459073.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426896|emb|CAK91676.1| unnamed protein product [Paramecium tetraurelia]
Length = 403
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 82/182 (45%), Gaps = 12/182 (6%)
Query: 314 EDIIWV-DEVDGLHKAICHIEGCKVVGIDCEW---KPNYVKGCKMNKVSIMQIASDEMVF 369
ED+ + DE + I I GID E P +MNKV ++QIA + +F
Sbjct: 222 EDVYLIEDEAQLTDEIIEEILNAPQTGIDTESFQEIPQTKFTSRMNKVCLLQIALPQKIF 281
Query: 370 IFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCD----IKQLAHSYGELECFKHYE 425
I + L L + S LK+G N + D + Q+ S +L
Sbjct: 282 ILNSANLTSSCK--YQQFLVKYATSNA-LKIGQNLRQDFLSLLGQIRASGVQLNQIIELS 338
Query: 426 MLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
L Q +E K LS K+LG L+K + SNW++RPL Q+ YAALDA + L +
Sbjct: 339 ELFQ-QKFPQEKKTNLSFQCSKLLGKELDKVEQISNWQRRPLRNAQIHYAALDAYICLHL 397
Query: 486 FH 487
++
Sbjct: 398 YN 399
>gi|343083203|ref|YP_004772498.1| 3'-5' exonuclease [Cyclobacterium marinum DSM 745]
gi|342351737|gb|AEL24267.1| 3'-5' exonuclease [Cyclobacterium marinum DSM 745]
Length = 200
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 86/172 (50%), Gaps = 8/172 (4%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
+II V++ L + + K++G D E +P + KG + V+++Q+++ + ++ +
Sbjct: 22 NIILVEDEKSLQEMEKDLLSSKIIGFDTETRPAFKKGVSYD-VALLQLSTTDNAYLIRIN 80
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF 434
S IL++P I+K+G + D+K L + +++ +++ V
Sbjct: 81 NFG------FPSSAKAILENPNIVKVGAAVRDDLKALKKISPHFKPDAFFDLNEELKRV- 133
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
G+ L+ +LG ++K+ + SNWE L+ Q+ YAA DA L+IF
Sbjct: 134 GFLNVGVRNLSAMVLGIRISKSEQVSNWEAPVLTSKQMLYAATDAWACLEIF 185
>gi|357462797|ref|XP_003601680.1| Werner syndrome ATP-dependent helicase [Medicago truncatula]
gi|355490728|gb|AES71931.1| Werner syndrome ATP-dependent helicase [Medicago truncatula]
Length = 311
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 32/226 (14%)
Query: 289 GFLKTREPEAGF----VHSR-FLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCE 343
G LKTR P F ++SR F +++ V + + ++E + + I +G D E
Sbjct: 93 GHLKTRLPVMKFCGKIMYSRTFTDVEKAVTKFLKIIEEK---KRDMIQIP----IGFDIE 145
Query: 344 WKPNYVKGCKMNKVSIMQIASD-EMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGY 402
W+P + +G K ++MQI D + LI + L +L+ +LK+G
Sbjct: 146 WRPTFKRGVPPGKTAVMQICCDTNHCLVLHLIHSG------IPRNLQLLLEDSSVLKVGA 199
Query: 403 NFQCDIKQLAHSYGELECFKHYEMLLDI-----QNVFKEP-KGGLSGLAEKILGAGLNKT 456
D +++ Y F + + D+ Q + P K GL+ L EK+L L K
Sbjct: 200 GIGGDASKVSRDY-----FISIKGVEDLSYHANQKLGGGPNKWGLASLTEKLLSKQLKKP 254
Query: 457 R--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSE 500
R NWE LS+ QLEYAA DA ++ ++ +V++
Sbjct: 255 SKIRMGNWETPYLSKEQLEYAATDAFASWFLYQTIKDLPDAQEVAD 300
>gi|363733349|ref|XP_001235033.2| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
helicase homolog [Gallus gallus]
Length = 1498
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 82/161 (50%), Gaps = 15/161 (9%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VG D EW P+Y KG KM K++++Q+ ++E ++F + ++ L R+L+
Sbjct: 88 AVGFDIEWPPSYTKG-KMAKIALIQLCVTEEKCYLFHISSMSG-----FPKGLKRLLEDE 141
Query: 396 GILKLGYNFQCDIKQLAHSYGELEC-FKHYEMLLDIQNVFKEPKG--GLSGLAEKILGAG 452
I K+G + D +L G+ E K + L D+ N + K L+GL + + G
Sbjct: 142 TIKKVGVGIEGDHWKL---MGDFEVKLKSFVELADVANEKLKCKEVWSLNGLVKHLFGKQ 198
Query: 453 L--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
L +K+ R NWE+ PL + Q YAA DA I+ +++
Sbjct: 199 LLKDKSIRCGNWEKFPLDEEQKLYAATDAYAGFIIYQKLKT 239
>gi|427403582|ref|ZP_18894464.1| hypothetical protein HMPREF9710_04060 [Massilia timonae CCUG 45783]
gi|425717565|gb|EKU80521.1| hypothetical protein HMPREF9710_04060 [Massilia timonae CCUG 45783]
Length = 205
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 15/170 (8%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
+A+ + +G D E KP + KG ++Q+A+ + ++F A V
Sbjct: 37 REALADLLASDAIGFDTESKPTFAKGEVSTGPHLVQLATLDTAWLFQTATPAGMALAV-- 94
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE-----PKGG 440
+ L +L+ +LK+G+ D+K+L +G +LD+ + P G
Sbjct: 95 TVLKPVLEDERVLKVGFGLGDDVKRLKSKFG-----IGLRNVLDLSTALRRRGERNPLGA 149
Query: 441 LSGLAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFHH 488
S + E+ G L K++R +NW LS QL+YAA DA L+I+
Sbjct: 150 RSAV-ERFFGQRLQKSKRITTTNWALPRLSDKQLQYAADDAHAALKIYRQ 198
>gi|410962527|ref|XP_003987820.1| PREDICTED: LOW QUALITY PROTEIN: exonuclease 3'-5' domain-containing
protein 2 [Felis catus]
Length = 621
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 90/190 (47%), Gaps = 17/190 (8%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDE----MVFIFDLIKLAEDVPDVLDSC 387
+E V+GIDCEW K + +S++Q+AS +V + LI+ + +P L
Sbjct: 99 LEDLPVLGIDCEW---VNSEGKASPLSLLQMASSSGFCVLVRLPKLIRGGKTLPXTL--- 152
Query: 388 LTRILQSPGILKLGYNFQCDIKQLAHSYGEL--ECFKHYEMLLDIQNVFKEPKGGLSGLA 445
IL ILK+G D +L YG + C + + +N L LA
Sbjct: 153 -LDILADGSILKVGVGSSEDASKLLQDYGLVVKGCLDLRYLAMRQRNNLLCNGLSLKSLA 211
Query: 446 EKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS--CSQPTDVSEG 501
E +L L+K+ R SNW+ L+++Q+ YAA DA + + +F H+ S+ + + E
Sbjct: 212 ETVLNFPLDKSLLLRCSNWDAENLTEDQVIYAARDAQISVALFLHLLGYRFSRNSTLDEN 271
Query: 502 HDKIEWKSYI 511
D + W+ +
Sbjct: 272 DDHMSWREVL 281
>gi|326918448|ref|XP_003205500.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
helicase-like [Meleagris gallopavo]
Length = 1569
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 13/160 (8%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VG D EW P+Y KG KM K++++QI + E ++F + ++ L R+L+
Sbjct: 159 AVGFDIEWPPSYAKG-KMAKIAVIQICVTKEKCYLFHISSMSG-----FPKGLKRLLEDE 212
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKG--GLSGLAEKILGAGL 453
I K G + D +L + E++ K + L D+ N + K L+GL + + G L
Sbjct: 213 TIKKAGVGIEGDHWKLMSDF-EVK-LKSFVELADVANEKLKCKEVWSLNGLVKHLFGKQL 270
Query: 454 --NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
+K+ R NWE+ PL + Q YAA DA L I+ +++
Sbjct: 271 LKDKSIRCGNWEKFPLDEEQKLYAATDAYAGLIIYQKLKN 310
>gi|313234915|emb|CBY24860.1| unnamed protein product [Oikopleura dioica]
Length = 812
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 94/211 (44%), Gaps = 34/211 (16%)
Query: 335 CKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMV----FIFDLIKLAEDVPDVLDSCLTR 390
C VG+DCEW NK ++MQI+ F+ L K+ D+ + L
Sbjct: 100 CNYVGLDCEW-------VGKNKTALMQISVSTPAGIKCFLIRLCKV--DIRICYE--LMA 148
Query: 391 ILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEM-LLDIQNVFKEPK---GGLSGLAE 446
L+ ++KLG D K+L+ + F + D++ + GGL+ L
Sbjct: 149 FLRDEDVVKLGCGIDGDFKRLSEV--DFVIFHPATISFFDLRQIIPATNYQNGGLANLTR 206
Query: 447 KILGAGLNKTRRN--SNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSE-GHD 503
+ILG LNK R SNWE LS Q YAA DAV LQI + + E G
Sbjct: 207 QILGRKLNKDYRVRCSNWEADTLSNEQKTYAADDAVCALQILGKL--------IQELGES 258
Query: 504 KIEWKSYIVSHMDNPKKSKKRPTIKKETESG 534
++++ +I + + K K +P K+ +SG
Sbjct: 259 RVQY--FINEYKNTVFKQKSKPNKDKKEKSG 287
>gi|302697639|ref|XP_003038498.1| hypothetical protein SCHCODRAFT_103723 [Schizophyllum commune H4-8]
gi|300112195|gb|EFJ03596.1| hypothetical protein SCHCODRAFT_103723, partial [Schizophyllum
commune H4-8]
Length = 644
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 14/162 (8%)
Query: 338 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGI 397
VG D EWKP YV G N+V+++Q+A + + + + ++ + L +L+ P +
Sbjct: 59 VGFDMEWKPVYVSGQAENRVALVQVADGDHIVLVQVSQM-----QLFPEQLRLLLEDPSV 113
Query: 398 LKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV----FKEPKGGLSGLAEKI---LG 450
K G D ++L +G + ++ L ++V +K P GLA I
Sbjct: 114 AKTGVGISGDAQKLYRDHG-ISMSNVVDLGLMTRSVDNANWKGPYSSPIGLARLIDFYEK 172
Query: 451 AGLNKTR-RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
L K R SNWE+ PLS Q +YAA DA ++ +R+
Sbjct: 173 RELRKGRISRSNWEKVPLSDEQKQYAANDAHCAWVLYGRLRT 214
>gi|409051283|gb|EKM60759.1| hypothetical protein PHACADRAFT_48952, partial [Phanerochaete
carnosa HHB-10118-sp]
Length = 258
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 75/159 (47%), Gaps = 15/159 (9%)
Query: 339 GIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGIL 398
G D EWKP Y KG K N V+++Q+A++E V + + + P +L ++L P +
Sbjct: 48 GFDLEWKPCYRKGQKENPVALVQLANEETVLLIHITAIRLFPPSLL-----QVLWDPAYI 102
Query: 399 KLGYNFQCDIKQLAHSY--GELECFKHYEMLLDIQNV-----FKEPKGGLSGLAEKILGA 451
K G Q D K+L + Y C + + N + +P GL+ L E
Sbjct: 103 KCGVGIQGDCKKLWNDYQVNTRNCVDLALLARTVDNARWKGKYSQPI-GLARLCETYEEL 161
Query: 452 GLNKTR-RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L K + SNWE LS+ Q++YAA D L IF +
Sbjct: 162 SLTKGKITRSNWEAV-LSEAQVQYAANDCHSGLTIFKRL 199
>gi|37523316|ref|NP_926693.1| ribonuclease D [Gloeobacter violaceus PCC 7421]
gi|35214320|dbj|BAC91688.1| glr3747 [Gloeobacter violaceus PCC 7421]
Length = 195
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 83/183 (45%), Gaps = 10/183 (5%)
Query: 319 VDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQI--ASDEMVFIFDLIKL 376
V E L + + + KV+ +D E + N+VS++Q+ + E V + D +
Sbjct: 11 VTETAQLSELVDRWQTRKVLAVDTETAHWHQVSTGKNRVSLLQVWDGTSEAVSVIDCFAV 70
Query: 377 AEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE 436
L + + + +++ I+KL +N D+ L + +M I +
Sbjct: 71 D------LTAFVEKTMRNWEIVKLIHNAPYDLAYLGGAAQARSVVCTLQMARSIPTSRRG 124
Query: 437 P--KGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQ 494
+ L L+ LG L+K + SNW RPL+ QL+YAALD V I+ H+R+ +
Sbjct: 125 ALERNSLKALSAHFLGIELDKRYQASNWALRPLTAEQLDYAALDPWVTFHIWEHMRALVE 184
Query: 495 PTD 497
P +
Sbjct: 185 PEN 187
>gi|298713371|emb|CBJ33586.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 818
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 16/175 (9%)
Query: 330 CHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIA-SDEMVFIFDLIKLAEDV-PDVLDSC 387
C +G V+G+DCEW+P + G V +Q+A D +F L + + P ++
Sbjct: 180 CATQGM-VLGMDCEWEPAF-NGSSERPVCTLQLALPDGTSSLFHLQRGGRGITPSTFNTN 237
Query: 388 LTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE-----PKGGLS 442
L R+L I K+G + D K+L Y ++E ++D+++ + P L+
Sbjct: 238 LKRLLGDLAITKVGVAVKGDGKRLQRDY-DVET----RGMVDLRSYARACWVDLPCRSLA 292
Query: 443 GLAEKILGAGLNK--TRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQP 495
G+ LG L+K R S+W + L+ NQ+EYA LDA + + + P
Sbjct: 293 GMTATALGKYLSKDAAGRFSHWSRPELTPNQIEYACLDAYAAVLLHAEIGKFKDP 347
>gi|390604235|gb|EIN13626.1| ribonuclease H-like protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 443
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 83/187 (44%), Gaps = 24/187 (12%)
Query: 313 VEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFD 372
+ D I D+V + I+ + VG D EWKP +VK N V+++QIAS + +
Sbjct: 50 IRDHITADDV------LSGIQADEPVGFDLEWKPVFVKDAPQNPVALVQIASSTLTLLLQ 103
Query: 373 LIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY--GELECFKHYEMLLDI 430
+ + L +L++P K+G D K+L Y C + + +
Sbjct: 104 VSAMQR-----FPQRLKTLLENPAQRKVGVAILDDCKKLFRDYHINVRSCVELALLARSV 158
Query: 431 QNV-----FKEPKGGLSGLAEKILG---AGLNKTRRNSNWEQRPLSQNQLEYAALDAVVL 482
N + P GL+ L E G G K +R SNWE LS Q EYAA DA
Sbjct: 159 DNANWKGKYSHPL-GLARLLETYKGFTLEGKGKIQR-SNWEAL-LSDKQQEYAANDAHAG 215
Query: 483 LQIFHHV 489
L I++H+
Sbjct: 216 LAIYNHL 222
>gi|212704372|ref|ZP_03312500.1| hypothetical protein DESPIG_02427 [Desulfovibrio piger ATCC 29098]
gi|212672197|gb|EEB32680.1| 3'-5' exonuclease [Desulfovibrio piger ATCC 29098]
Length = 201
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 319 VDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAE 378
V ++ KA+ ++ +V+G D E +P++ KG ++N S++Q+A+ V++ L
Sbjct: 30 VRSLEDWEKALPDLQQEQVLGFDTETRPSFRKG-RVNTPSLVQLATARAVYLVQLSWWP- 87
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE-- 436
L +L P ++K G D+++LA Y FK M+ D+ V +
Sbjct: 88 -----FGPELAGLLADPAVIKAGVAIGDDMRELARLY----PFKPAGMV-DLGMVARAHQ 137
Query: 437 -PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
GL LA + G ++K + SNW LS+ Q+ YAA DA + I+ +R
Sbjct: 138 LTTQGLRTLAANLFGQRISKGPQCSNWSVMELSKRQVIYAATDAWIGRAIYLRMR 192
>gi|149057893|gb|EDM09136.1| rCG43045, isoform CRA_b [Rattus norvegicus]
Length = 1335
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 84/167 (50%), Gaps = 15/167 (8%)
Query: 331 HIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLT 389
H+ VVG D EW P Y +G K ++V+++Q+ S+ ++F + ++ V L
Sbjct: 66 HLSDGDVVGFDMEWPPIYKQG-KRSRVAVIQLCVSESKCYLFHISSMS-----VFPQGLK 119
Query: 390 RILQSPGILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDIQN--VFKEPKGGLSGLAE 446
+L++ I K G + D +L + +LE F L D+ N + L+GL +
Sbjct: 120 MLLENKSIRKAGVGIEGDQWKLLRDFDVKLESFVE---LTDVANRKLKCAETWSLNGLVK 176
Query: 447 KILGAGL--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
+LG L +K+ R SNW PLS++Q YAA DA L I+ + +
Sbjct: 177 HVLGKQLLKDKSIRCSNWSDFPLSEDQKLYAATDAYAGLIIYQKLEN 223
>gi|82793580|ref|XP_728099.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23484273|gb|EAA19664.1| Streptococcus pyogenes AMV256, putative [Plasmodium yoelii yoelii]
Length = 713
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 98/247 (39%), Gaps = 82/247 (33%)
Query: 314 EDIIWVD------EVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEM 367
EDI +D E++ +++ + + VGID EW + K S++ ++ +
Sbjct: 437 EDIYNIDYNNNLTEIENINRNLRMKKKKFYVGIDVEWN-------RKQKASVISFSTCKK 489
Query: 368 VFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY------------ 415
V++ DL + + ++ L IL++P I KL +NF CDI ++ +
Sbjct: 490 VYVVDLFNIDYNYKLLVYKFLKWILENPFIYKLFFNFLCDIYIMSMYFKNISNLNTFINV 549
Query: 416 ------------------------------------GELECFKH------YEMLLDIQNV 433
+ E FK Y +I+N
Sbjct: 550 IDLKKPLSVEKCNNGDIYNCNNIINAELMNRNILENNDTELFKKLTNSSTYNFKKEIENK 609
Query: 434 FKEPKGGLSGLAEKI---------------LGAGLNKTRRNSNWEQRPLSQNQLEYAALD 478
F P+ ++ L +KI L L+K + SNW +RPLS+ Q+EYA LD
Sbjct: 610 FNGPENIITALPKKINKHYFKSLNDLCFQFLRKKLSKKLQLSNWNKRPLSKEQIEYAGLD 669
Query: 479 AVVLLQI 485
A VL+ I
Sbjct: 670 AYVLIPI 676
>gi|147818277|emb|CAN64722.1| hypothetical protein VITISV_026723 [Vitis vinifera]
Length = 219
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 20/178 (11%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
WV E+ ++ VVG+D EW+PN + NK + +Q+ + I L +
Sbjct: 51 WVQEILSIYAG-----KPMVVGLDIEWRPNRIPSMS-NKSATLQLCINNKCLILQLFYMD 104
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEM-LLDIQ---NV 433
E +P L L +G DI +L + YG LEC ++ +L +Q
Sbjct: 105 E-IPQSLKG----FLLDSNFTFVGVEVGADIDKLKNEYG-LECSCSADVRILAMQRWPGR 158
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
F+ P GL LA +++ + K + SNWE R L++NQ++YA +DA +I H +
Sbjct: 159 FRRP--GLKDLAWEVVNLRMKKPKHVCMSNWEARVLNENQVDYACIDAYASYRIGHKL 214
>gi|389746389|gb|EIM87569.1| hypothetical protein STEHIDRAFT_139203 [Stereum hirsutum FP-91666
SS1]
Length = 1192
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 103/264 (39%), Gaps = 49/264 (18%)
Query: 248 WDIAEAKTKGDKRLLEYLVYLAMEAGYSEKVDELCERYSLEGFLKTREPEAGFVHSRFLH 307
+D A ++ DK+L ++ YS + D + + P AG H+
Sbjct: 165 FDGARPASRTDKQLTS-TSKTTVKKPYSNRSDSRTTSSASRTPVTDDPPVAGSSHTAASS 223
Query: 308 LKELVVEDIIWVD--------------EVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCK 353
+ + + + D E D L +A+ VG D EW
Sbjct: 224 KSQSKMPNFTYGDYFPRPIVRYVTNAAEADELVQALN-----GPVGFDMEW--------- 269
Query: 354 MNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAH 413
+ K +++QI M+ + L + P V +++SP I K+G N + D +L
Sbjct: 270 VKKTALVQICDASMILLIQLSAIHSVPPKV-----KALIESPSIPKMGVNIRNDGVKLLR 324
Query: 414 SY----------GELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTR-RNSNW 462
Y G L C + ++ P L+ + L LNK R SNW
Sbjct: 325 DYDVCARNLVELGALACQSDSR----FEEIYHRPIVSLAKVVAFYLRRTLNKGPVRTSNW 380
Query: 463 EQRPLSQNQLEYAALDAVVLLQIF 486
E++PLS+ Q+EYAA DA L ++
Sbjct: 381 ERKPLSKEQMEYAANDAYCALLVY 404
>gi|109504268|ref|XP_001059940.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog isoform 1
[Rattus norvegicus]
gi|392354016|ref|XP_002728460.2| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Rattus
norvegicus]
Length = 1400
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 84/167 (50%), Gaps = 15/167 (8%)
Query: 331 HIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLT 389
H+ VVG D EW P Y +G K ++V+++Q+ S+ ++F + ++ V L
Sbjct: 66 HLSDGDVVGFDMEWPPIYKQG-KRSRVAVIQLCVSESKCYLFHISSMS-----VFPQGLK 119
Query: 390 RILQSPGILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDIQN--VFKEPKGGLSGLAE 446
+L++ I K G + D +L + +LE F L D+ N + L+GL +
Sbjct: 120 MLLENKSIRKAGVGIEGDQWKLLRDFDVKLESFVE---LTDVANRKLKCAETWSLNGLVK 176
Query: 447 KILGAGL--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
+LG L +K+ R SNW PLS++Q YAA DA L I+ + +
Sbjct: 177 HVLGKQLLKDKSIRCSNWSDFPLSEDQKLYAATDAYAGLIIYQKLEN 223
>gi|354472198|ref|XP_003498327.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Cricetulus griseus]
Length = 620
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 20/204 (9%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDE----MVFIFDLIKLAEDVPDVLDSC 387
+E V+GIDCEW ++G K + +S++Q+AS ++ + LI + +P L
Sbjct: 98 LEDFPVLGIDCEWV--NLEG-KASPLSLLQMASPSGFCSLIRLPRLIYGGKTLPRTL--- 151
Query: 388 LTRILQSPGILKLGYNFQCDIKQLAHSYGEL--ECFKHYEMLLDIQNVFKEPKGGLSGLA 445
IL ILK+G D +L YG + C + + N L LA
Sbjct: 152 -LDILADGTILKVGVGCSEDANKLLQDYGLIVRGCLDLRYLAMKQGNNILCNGLSLKSLA 210
Query: 446 EKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV--RSCSQPTDVSEG 501
E IL L+K+ R SNWE L+++Q+ YAA DA + + +F H+ S+ + E
Sbjct: 211 ETILNFPLDKSLLLRCSNWEAENLTEDQVTYAARDAQISVALFLHLLGYPLSRNSYEEEN 270
Query: 502 HDKIEWKSYI---VSHMDNPKKSK 522
+D++ W+ + + +D P +SK
Sbjct: 271 NDQVNWRKVLEKCRAMVDIPFRSK 294
>gi|399155667|ref|ZP_10755734.1| putative 3'-5' exonuclease [SAR324 cluster bacterium SCGC
AAA001-C10]
Length = 252
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 89/176 (50%), Gaps = 15/176 (8%)
Query: 319 VDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAE 378
+ E + +AI + V+G D E +P + KG + + VS++Q+++ E F+F L L
Sbjct: 56 ITESKDVSEAIKILRQESVLGFDTETRPTFKKGDQYS-VSLLQLSTREEAFLFRLNYLG- 113
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE-- 436
+P+ L S +L P ILK+G DI+ L +L F E +++ N+ +
Sbjct: 114 -LPEELAS----LLADPDILKVGVAILDDIRALQ----KLRKF-DAEGFVELSNIGSDLG 163
Query: 437 -PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
GL LA G ++K + +NWE+ L+ +Q YAA DA + L++ + S
Sbjct: 164 IVTCGLRNLAAIFFGVRISKKEQLTNWERPDLNSSQCLYAATDAWICLKMLSFLES 219
>gi|325180763|emb|CCA15173.1| LETM1 and EFhand domaincontaining protein 1 putative [Albugo
laibachii Nc14]
Length = 1136
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 22/181 (12%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRI 391
++ K+VGID E +P + N VS++QI++ + V+++ + + L L +
Sbjct: 146 LQNVKIVGIDTECRPRFDSNKANNPVSLIQISTIDTVYLYRIKR-----QQPLPPLLGHL 200
Query: 392 LQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE---PKGGLSGLAEKI 448
L SP ++K+G++ + D K L S + + LD + K + GL L +
Sbjct: 201 LASPHVIKVGHSLRDDCKSLRES----KLVERVSSTLDTLPIAKRLGCSRPGLKTLCQIF 256
Query: 449 LGAGLNKTRRNSNWEQRPLSQNQLEYAALDA----VVLLQIFH------HVRSCSQPTDV 498
L L+K + S+WE LS Q++YAA DA +V+L++ HVR + TD
Sbjct: 257 LDHNLSKKMQLSDWESPDLSVKQIQYAATDAWAPLLVILKMLQFKEARDHVRMKTYGTDK 316
Query: 499 S 499
S
Sbjct: 317 S 317
>gi|348510943|ref|XP_003443004.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Oreochromis niloticus]
Length = 640
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 76/160 (47%), Gaps = 8/160 (5%)
Query: 337 VVGIDCEW-KPNYV--KGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQ 393
V+G DCEW K + V KG K VS++Q+AS + I + L +L+
Sbjct: 122 VLGFDCEWVKTSAVSAKG-KAAVVSLLQMASYSGLCILVRLLPFRSSQQPFPHSLMEVLR 180
Query: 394 SPGILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDIQNVFKEPKG-GLSGLAEKILGA 451
+P ILK+G D K+L YG L C L Q G L LA +L
Sbjct: 181 NPHILKVGVGCYEDGKRLTRDYGLSLTCTVDLRHLALRQKQTSVSNGLSLKSLAADVLKI 240
Query: 452 GLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L+K+ R S+WE L+Q Q+ YAA DA V + +F H+
Sbjct: 241 SLDKSPEVRCSDWEADQLTQEQMTYAARDAQVSIALFLHL 280
>gi|449499575|ref|XP_002193489.2| PREDICTED: Werner syndrome ATP-dependent helicase homolog
[Taeniopygia guttata]
Length = 1497
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 85/163 (52%), Gaps = 13/163 (7%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VG D EW P Y KG +M K +++Q+ +++ ++F + +A L R+L+
Sbjct: 155 AVGFDIEWPPAYTKG-RMAKTAVIQMCVTEDKCYLFHVSSMAG-----FPKGLKRLLEDE 208
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKG--GLSGLAEKILGAGL 453
I K+G + D +L + E++ K + L D+ N + K L+GL + + G L
Sbjct: 209 TIKKVGVGIEGDQWKLMSDF-EIK-LKSFVELADVANEKLKCKETWSLNGLVKHLFGRQL 266
Query: 454 --NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQ 494
+++ R SNWEQ PL++ Q YAA DA ++ +++ S+
Sbjct: 267 LKDQSVRCSNWEQFPLNEEQKLYAATDAYAGYIVYEKLKNMSK 309
>gi|426233582|ref|XP_004010795.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 [Ovis
aries]
Length = 622
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 13/188 (6%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV--PDVLDSCLT 389
IE V+GIDCEW K + +S++Q+AS + L++L + + L L
Sbjct: 100 IEDFPVLGIDCEW---VNSEGKASPLSLLQMASPSGFCV--LVRLPKLICGGKTLPKTLL 154
Query: 390 RILQSPGILKLGYNFQCDIKQLAHSYGEL--ECFKHYEMLLDIQNVFKEPKGGLSGLAEK 447
IL ILK+G D +L YG + C + + +N L L+E
Sbjct: 155 DILADGTILKVGVGCSEDASKLLQDYGLIVKGCLDLRYLAMRQRNNLLSNGLSLKSLSET 214
Query: 448 ILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV--RSCSQPTDVSEGHD 503
+L L+K+ R SNW+ LS++Q+ YAA DA + + +F H+ S+ + + E D
Sbjct: 215 VLNFPLDKSLLLRCSNWDAENLSEDQVIYAARDAQISVALFLHLLGYPFSRNSTLEENDD 274
Query: 504 KIEWKSYI 511
I W+ +
Sbjct: 275 HIVWRKIL 282
>gi|321452322|gb|EFX63735.1| hypothetical protein DAPPUDRAFT_118908 [Daphnia pulex]
Length = 341
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 89/190 (46%), Gaps = 31/190 (16%)
Query: 314 EDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDL 373
E+I W+ +G+H+ + + VVG+D EW P + K +++QIA+ + +F+ D+
Sbjct: 141 ENIHWICSWEGVHEFLGIVSKSTVVGVDIEWPP----FGTLAKATVLQIATHDKIFLLDI 196
Query: 374 IKLAEDVP-DVLDS--CLTRILQSPGILKLGYNFQCDIKQLAHSY-GELECFKHYEMLLD 429
L ED V++S + + + ILKLGY + D+ L+ S G + K +D
Sbjct: 197 FSLREDKSCSVINSQQLIGDLFGNRHILKLGYGLKEDLHVLSRSLPGIGDVSKSIVNWID 256
Query: 430 IQNVFKEPKGGL-SGLAEKILGAG----------------------LNKTRRNSNWEQRP 466
I+N++ + S L +L G L+K + S+W++RP
Sbjct: 257 IKNLWSNIETKYPSFLPPAVLNDGDTCSQETHKGLSGLVKLLLGLPLDKKEQFSDWQKRP 316
Query: 467 LSQNQLEYAA 476
L +Q YA
Sbjct: 317 LRTSQFIYAG 326
>gi|390366383|ref|XP_797941.3| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Strongylocentrotus purpuratus]
Length = 570
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 18/186 (9%)
Query: 315 DIIWVDEVDGLHKAICHI----EGCKVVGIDCEWKPNYVKGCKMNKVSIMQIAS--DEMV 368
DI +D HKA+ + KV+G+DCEW K + V+++Q++S ++
Sbjct: 55 DIFVIDSSSAYHKAVESFAEATKQMKVIGLDCEW---VTKDGQRQPVALLQLSSPVNQSC 111
Query: 369 FIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELE--CFKHYEM 426
+F L +L ++P+ S LT ILQ LK+G D K+L + Y + C +
Sbjct: 112 LLFRLDQLDGELPE---SILT-ILQDRNTLKVGVGVIGDAKRLLNDYQIITHGCLDLRHL 167
Query: 427 LL-DIQNVFKEPKGGLSGLAEKILGAGLNKTRRN--SNWEQRPLSQNQLEYAALDAVVLL 483
L + + L LA +L + K R +WE PLS+ Q+ YA DAV+
Sbjct: 168 ALRHLSRTLRGRSLSLRELASIVLQHEMAKDDRVRCGDWEAVPLSKEQIHYAVDDAVIGA 227
Query: 484 QIFHHV 489
IF V
Sbjct: 228 AIFLRV 233
>gi|323345482|ref|ZP_08085705.1| 3'-5' exonuclease domain protein [Prevotella oralis ATCC 33269]
gi|323093596|gb|EFZ36174.1| 3'-5' exonuclease domain protein [Prevotella oralis ATCC 33269]
Length = 212
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 92/180 (51%), Gaps = 27/180 (15%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIF--DLIKLAEDVPDVL 384
+A+ ++ ++G+D E +P + KG +++KVS++Q+A+ ++ F+F ++I + +DV
Sbjct: 37 EAVDYLLSSDILGVDTETRPTFKKG-QIHKVSLLQVATKDICFLFRLNMIGINDDVK--- 92
Query: 385 DSCLTRILQSPGILKLGYNFQCDI----KQLAHSYGELECFKHYEMLLDIQNVFKE---P 437
R+L++ + +G ++ DI K+ A + G +D+QN+ E
Sbjct: 93 -----RLLENKSVPMIGLSWHDDILALHKRRAFNPG---------YFIDLQNIVGELGIK 138
Query: 438 KGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
L L I ++K ++ +NW+ L+ Q EYAA DA + +++ + Q D
Sbjct: 139 DLSLQKLYANIFHQKISKRQQLTNWDADVLNDKQKEYAATDAWACVMLYNEIMHLKQSGD 198
>gi|357130643|ref|XP_003566957.1| PREDICTED: Werner Syndrome-like exonuclease-like [Brachypodium
distachyon]
Length = 201
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 13/179 (7%)
Query: 322 VDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVP 381
V+G + I G VVG+D EW+P+ + N V+++Q+ IF L+
Sbjct: 28 VEGWLREIRSFLGDLVVGLDVEWRPS--RCSSQNPVALLQLCVGHRCLIFQLLH-----A 80
Query: 382 DVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEP---K 438
D + L+ L + +G Q D+++L+ + EL ++ + F P +
Sbjct: 81 DFVPPALSEFLADLNVRFVGVGVQDDVERLSDDH-ELNVANAKDLRELAADGFHMPELRQ 139
Query: 439 GGLSGLAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQP 495
GL +A ++GA L K +R W+ LS Q++YA +DA V +I + + P
Sbjct: 140 AGLQAIARTVMGANLQKPQRVRMGPWDAYCLSHEQIKYACIDAFVSFEIGRKLLTGDYP 198
>gi|145525585|ref|XP_001448609.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416164|emb|CAK81212.1| unnamed protein product [Paramecium tetraurelia]
Length = 498
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 11/182 (6%)
Query: 314 EDIIWVDEVDGLHKAIC-HIEGCKVVGIDCEWKPNYVKGC--KMNKVSIMQIASDEMVFI 370
ED++ +++ + L I I GID E + + N+V + QIA +++
Sbjct: 318 EDVVLIEDEEALDDEIIDQILKASQTGIDTESYQDIPQNTFSAKNQVCLFQIALPNKIYL 377
Query: 371 FDLIKLAEDVPDVLDSCLTRILQSPGILKLGYN----FQCDIKQLAHSYGELECFKHYEM 426
+ L + L + S LK+G N F C + Q+ +L F
Sbjct: 378 LNTTNLVNSIK--YQQFLVQ-YASSDCLKIGQNIKMDFLCLLVQIGKQDVDLRNFIELSQ 434
Query: 427 LLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
L Q E K LS +++LG L+K + S+W++RPL Q+ YAALDA++ L ++
Sbjct: 435 LFR-QKYPDEKKTNLSFQCQRLLGKELDKVEQISHWQKRPLRSAQIHYAALDAIICLHLY 493
Query: 487 HH 488
+H
Sbjct: 494 NH 495
>gi|404405990|ref|ZP_10997574.1| ribonuclease D [Alistipes sp. JC136]
Length = 202
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 94/188 (50%), Gaps = 24/188 (12%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
I+ V++ + +A + +G D E +P++ G +VS++Q+++ + ++F L K
Sbjct: 28 ILLVEQERDIAEACKQLAQQPQIGFDTETRPSFRPGVTF-RVSLLQLSTPTVCYLFRLNK 86
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYE--MLLDIQNV 433
+ L + ++L++ +LK+G + D++ L +H+ +D+Q +
Sbjct: 87 IP------LAKPILQLLENKEVLKIGADVAGDLRSLRQ-------IRHFRDGGFVDLQTI 133
Query: 434 FKEPKGG-----LSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHH 488
P+ G L L+ +LG ++K +R SNWE L+ Q YAA DA V +I+
Sbjct: 134 --APQWGIEEKSLRKLSAIVLGQRVSKAQRLSNWEAATLTDKQQLYAATDAWVCTRIYEQ 191
Query: 489 -VRSCSQP 495
+R+ +P
Sbjct: 192 LLRTPKKP 199
>gi|357120544|ref|XP_003561987.1| PREDICTED: Werner Syndrome-like exonuclease-like [Brachypodium
distachyon]
Length = 199
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 75/160 (46%), Gaps = 30/160 (18%)
Query: 337 VVGIDCEWKPNYVKGCK----MNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRIL 392
+VG+DCEWKP C +KV+I+Q+ I + + + VP + S L
Sbjct: 44 LVGLDCEWKP-----CDHLPVPSKVAILQLCVGTSCLILQMFYV-DRVPAGIRS----FL 93
Query: 393 QSPGILKLGYNFQCDIKQLAHSYG---------ELECFKHYEMLLDIQNVFKEPKGGLSG 443
P + +G D +LA YG E C +H L I+++F+ + GL G
Sbjct: 94 GDPTVRCVGIGVGEDCGKLAVDYGIVCAAPVDLEDRCNQH----LGIRSLFRN-RLGLKG 148
Query: 444 LAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVV 481
+ILG + K R SNWE R LS Q+ YA +DA V
Sbjct: 149 YTREILGLTMAKPRHVTMSNWETRDLSVAQVVYACIDAYV 188
>gi|355697852|gb|EHH28400.1| Werner syndrome ATP-dependent helicase [Macaca mulatta]
Length = 1431
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 88/173 (50%), Gaps = 18/173 (10%)
Query: 325 LHKAIC-HIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPD 382
L + IC + VVG D EW P Y KG K+ KV+++Q+ S+ ++F + ++
Sbjct: 65 LSEDICMSLSDGDVVGFDMEWPPLYNKG-KLGKVALIQLCVSESKCYLFHISSMS----- 118
Query: 383 VLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPK---- 438
V L +L++ I K G + D +L + K++ L D+ N K+ K
Sbjct: 119 VFPQGLKMLLENKAIKKAGVGIEGDQWKLLRDFDIK--LKNFVELTDVAN--KKLKCTET 174
Query: 439 GGLSGLAEKILGAGL--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
LSGL + +LG L +K+ R SNW + PL+++Q YAA DA I+ ++
Sbjct: 175 WSLSGLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATDAYAGFIIYRNL 227
>gi|109086093|ref|XP_001085031.1| PREDICTED: Werner syndrome ATP-dependent helicase-like [Macaca
mulatta]
Length = 1432
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 88/173 (50%), Gaps = 18/173 (10%)
Query: 325 LHKAIC-HIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPD 382
L + IC + VVG D EW P Y KG K+ KV+++Q+ S+ ++F + ++
Sbjct: 65 LSEDICMSLSDGDVVGFDMEWPPLYNKG-KLGKVALIQLCVSESKCYLFHISSMS----- 118
Query: 383 VLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPK---- 438
V L +L++ I K G + D +L + K++ L D+ N K+ K
Sbjct: 119 VFPQGLKMLLENKAIKKAGVGIEGDQWKLLRDFDIK--LKNFVELTDVAN--KKLKCTET 174
Query: 439 GGLSGLAEKILGAGL--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
LSGL + +LG L +K+ R SNW + PL+++Q YAA DA I+ ++
Sbjct: 175 WSLSGLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATDAYAGFIIYRNL 227
>gi|157963247|ref|YP_001503281.1| 3'-5' exonuclease [Shewanella pealeana ATCC 700345]
gi|157848247|gb|ABV88746.1| 3'-5' exonuclease [Shewanella pealeana ATCC 700345]
Length = 292
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 18/183 (9%)
Query: 323 DGLHKAICHIEGCKVVGIDCEWKPNYVKGCK-MNKVSIMQIASDEMVFIFDLIKLAEDVP 381
D L A+ IE +G D E + KG + N +S++QIA+ ++F + E++
Sbjct: 100 DSLTAAVADIEAQTCIGFDTETAATFEKGRRNPNPISLIQIATPTHSYLFRM--QGENIV 157
Query: 382 DVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQ---NVFKEPK 438
+ + L IL +LK+G + D+ + + E+ +LD+ N PK
Sbjct: 158 PFM-AALAPILSGDKLLKVGIGLRSDLNAMKRDF-EISV----NSMLDLNWLMNQLGAPK 211
Query: 439 G-GLSGLAEKILGAGLNKTRRN--SNWEQ---RPLSQNQLEYAALDAVVLLQIFHHVRSC 492
G +A +L L K+++ SNW + PLS+ QL+YAA DA V L I + +
Sbjct: 212 QLGTQQMAATVLALKLPKSKKVTLSNWAKPLAEPLSELQLQYAAADAFVALDILYGLLEQ 271
Query: 493 SQP 495
+P
Sbjct: 272 LRP 274
>gi|170084825|ref|XP_001873636.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651188|gb|EDR15428.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 398
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 77/171 (45%), Gaps = 23/171 (13%)
Query: 339 GIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGIL 398
G D EWKPN+VKG N V+++Q+A+DE + + + + E + L IL S L
Sbjct: 55 GFDLEWKPNFVKGEGENPVALVQLANDETILLLQISAMKE-----FPTKLEEILGSSDFL 109
Query: 399 KLGYNFQCDIKQL--AHSYGELECFKHYEMLLDIQNVFKEPKGGLS-GLAE-------KI 448
K+G Q D ++L H C + I N + K S GLA ++
Sbjct: 110 KVGVAIQHDTQKLYKDHQVSTYNCVDLSLLARSIDNDRWKGKYNSSLGLARVIESYEYRL 169
Query: 449 LGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHH----VRSCSQP 495
LG G K R SNWE + L Q YAA DA I+ V S S P
Sbjct: 170 LGKG--KISR-SNWEGQ-LRDPQQLYAANDAHAGYTIYRRLIAMVNSSSTP 216
>gi|94987515|ref|YP_595448.1| ribonuclease D [Lawsonia intracellularis PHE/MN1-00]
gi|442556368|ref|YP_007366193.1| 3'-5' exonuclease domain protein [Lawsonia intracellularis N343]
gi|94731764|emb|CAJ55127.1| Ribonuclease D [Lawsonia intracellularis PHE/MN1-00]
gi|441493815|gb|AGC50509.1| 3'-5' exonuclease domain protein [Lawsonia intracellularis N343]
Length = 198
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 80/153 (52%), Gaps = 15/153 (9%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
V+G D E +P++ KG K +++Q+AS + V + L K VP L L IL
Sbjct: 50 VLGFDTEARPSFKKG-KSYPTALVQLASSQHVILIRLSK----VP--LGELLVNILSCAK 102
Query: 397 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPK---GGLSGLAEKILGAGL 453
I+K G DI+ L +L F+ E ++DI + + + GL LA ILG +
Sbjct: 103 IIKAGVAIHEDIRLLQ----KLHPFEA-EGIIDIAEMARRLQLKAQGLRTLAANILGCRV 157
Query: 454 NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
+K + SNWE++ LS Q+ YAA DA V +++
Sbjct: 158 SKAVQCSNWEKKELSPQQVLYAATDAWVGRELY 190
>gi|117924196|ref|YP_864813.1| 3'-5' exonuclease [Magnetococcus marinus MC-1]
gi|117607952|gb|ABK43407.1| 3'-5' exonuclease [Magnetococcus marinus MC-1]
Length = 238
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 15/175 (8%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
D++ V++ L AI + +V+G D E +P++ KG + +++Q+A +++V++F +
Sbjct: 31 DVVLVNQDQALPAAIAALRQERVLGFDTETRPSFRKGTSYDP-TLIQLAGEKVVYLFQIN 89
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF 434
L + P L +L I K+G DI+QL + FK +D+
Sbjct: 90 LLQDHRP------LAELLADTSIHKVGVGLSQDIRQLQAIF----SFKP-GGFVDVGETA 138
Query: 435 KE---PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
+ GL +A ++K + SNW Q L Q+ YAA DA + +++
Sbjct: 139 RHNNIATRGLRSMAAAFFHVRISKRAQCSNWAQEALQPFQIIYAATDAWISRELY 193
>gi|390443237|ref|ZP_10231033.1| transporter, nhac family protein [Nitritalea halalkaliphila LW7]
gi|389667079|gb|EIM78512.1| transporter, nhac family protein [Nitritalea halalkaliphila LW7]
Length = 714
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 18/176 (10%)
Query: 319 VDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAE 378
+D+ + + +A + V+G D E +P++ KG + KVS++Q++++E F+F L +
Sbjct: 541 IDKPEQVQEAFERLREETVIGFDTETRPSFRKGTQY-KVSLLQLSTNEEAFLFRLQHVG- 598
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIK---QLAHSYGELECFKHYEML--LDIQNV 433
+ +L++ ILK+G D++ +L ++ E F E L + QNV
Sbjct: 599 -----FPPQIKGLLENQDILKVGAAVLDDLRALRKLDPTFLEQNFFDLNEELKRVGFQNV 653
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
G+ L+ +L ++K+ + SNWE LS QL YAA DA L IF +
Sbjct: 654 ------GVRNLSAMVLNIRISKSEQVSNWEADMLSDKQLLYAATDAWACLAIFDRL 703
>gi|402877950|ref|XP_003902671.1| PREDICTED: Werner syndrome ATP-dependent helicase [Papio anubis]
Length = 1373
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 17/160 (10%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG D EW P Y KG K+ KV+++Q+ S+ ++F + ++ V L +L++
Sbjct: 78 VVGFDMEWPPLYNKG-KLGKVALIQLCVSESKCYLFHISSMS-----VFPQGLKMLLENK 131
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPK----GGLSGLAEKILGA 451
I K G + D +L + K++ L D+ N K+ K LSGL + +LG
Sbjct: 132 AIKKAGVGIEGDQWKLLRDFDIK--LKNFVELTDVAN--KKLKCTETWSLSGLVKHLLGK 187
Query: 452 GL--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L +K+ R SNW + PL+++Q YAA DA I+ ++
Sbjct: 188 QLLKDKSIRCSNWSKFPLTEDQKLYAATDAYAGFIIYRNL 227
>gi|301763301|ref|XP_002917070.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Ailuropoda melanoleuca]
gi|281349384|gb|EFB24968.1| hypothetical protein PANDA_005241 [Ailuropoda melanoleuca]
Length = 622
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 108/237 (45%), Gaps = 16/237 (6%)
Query: 288 EGFLKTREPEAGFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPN 347
E L P A + R L K + V D+++ L ++ +E C V+GIDCEW
Sbjct: 59 EDQLHAGAPRASW-EERILGAKVVTVSQEAEWDQIEPLLRS--ELEDCPVLGIDCEW--- 112
Query: 348 YVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV--PDVLDSCLTRILQSPGILKLGYNFQ 405
K + +S++Q+AS + L++L + + L L +L + K+G
Sbjct: 113 VNSEGKASPLSLLQVASPSGFCV--LVRLPKLICGGKTLPKTLLDMLVDGTVFKVGVGCS 170
Query: 406 CDIKQLAHSYGEL--ECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTR--RNSN 461
D +L YG + C + + N L LAE +L L+K+ R SN
Sbjct: 171 EDASRLLRDYGLVVKGCLDLRYLAVRQGNNLLCNGLSLKSLAETVLNFPLDKSLLLRCSN 230
Query: 462 WEQRPLSQNQLEYAALDAVVLLQIFHHV--RSCSQPTDVSEGHDKIEWKSYIVSHMD 516
W+ L+++Q+ YAA DA + + +F H+ S+ + + E +D + W+ + + D
Sbjct: 231 WDAENLTEDQVIYAARDAQISVALFLHLLGYPFSRNSTLDENNDHVGWRKVLENCQD 287
>gi|452852181|ref|YP_007493865.1| 3'-5' exonuclease (modular protein) [Desulfovibrio piezophilus]
gi|451895835|emb|CCH48714.1| 3'-5' exonuclease (modular protein) [Desulfovibrio piezophilus]
Length = 270
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 12/152 (7%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSC--LTRILQS 394
++G D E +P + KG K S++Q+A+ E V++F + ++L C L +L
Sbjct: 119 ILGFDTETRPVFKKGKKPGPPSLIQLATAEQVYVFQI--------NILRLCDGLCDLLAD 170
Query: 395 PGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLN 454
I K G + DI L + + + L DI GL +A +LG ++
Sbjct: 171 ESITKTGVAVRDDILGL-QRLADFDPAGFID-LSDISAKASMQTHGLRNMAANLLGFRIS 228
Query: 455 KTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
K+ + SNW + L+Q Q+ YAA DA V ++F
Sbjct: 229 KSAQCSNWAKEKLTQQQISYAATDAWVSRELF 260
>gi|314122235|ref|NP_001186629.1| exonuclease 3'-5' domain-containing protein 2 [Gallus gallus]
Length = 621
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 311 LVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDE---- 366
+V E W D V L K +E V+G+DCEW V+G K N VS++Q+AS
Sbjct: 83 VVSERQEW-DRVQPLLKT--ELEKWPVLGMDCEWV--SVEG-KANPVSLLQMASASGLCV 136
Query: 367 MVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYG-------ELE 419
+V + L+ + VP L I+ +LK+G D +L Y +L
Sbjct: 137 LVRLPRLVASGQPVPKTL----LDIMADDAVLKVGVGCWEDACKLLQDYSLPVKGSVDLR 192
Query: 420 CFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAAL 477
+ + N L LAEK+L L+K+ R SNWE L+Q+Q+ YAA
Sbjct: 193 YLAMRQRKDLLHNCL-----SLKSLAEKVLNCPLDKSPHMRCSNWEAEELTQDQVLYAAR 247
Query: 478 DAVVLLQIFHHVRSCSQPTDVSEGHDKIEWKSYIVSH----MDNPKKSKK 523
DA V + +F H+ + S+G + + ++S +D P K +K
Sbjct: 248 DAQVSVALFLHLLGFACLPATSKGENSVSGWEKVLSKCQGLVDIPFKGRK 297
>gi|320159696|ref|YP_004172920.1| putative ribonuclease D [Anaerolinea thermophila UNI-1]
gi|319993549|dbj|BAJ62320.1| putative ribonuclease D [Anaerolinea thermophila UNI-1]
Length = 380
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 85/209 (40%), Gaps = 29/209 (13%)
Query: 317 IWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKL 376
IWV L + + H+ C+ + +D E N + + ++ ++Q + ++ D +
Sbjct: 10 IWVATPTALRRMMNHLLACEQIAVDTE--SNGLHAYQ-EQICLIQFSVPGADYLVDPLA- 65
Query: 377 AEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE 436
V S L I +PGI K+ + + DI L +G F H + +
Sbjct: 66 -----SVNLSGLNEIFSNPGIEKVFHAAEYDILCLKRDFGF--TFTHLFDTMIAARILGR 118
Query: 437 PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHH-------- 488
+ GL+ L E+ G L+K + +NW +RPL L YA LD L+ + +H
Sbjct: 119 SEVGLAALLEEHFGVTLDKRYQRANWARRPLPPAMLNYARLDTHYLIDLRNHLAKELAER 178
Query: 489 ----------VRSCSQPTDVSEGHDKIEW 507
+R C P +E + W
Sbjct: 179 GLTALAEEDFLRVCETPAAPAESRPPMWW 207
>gi|91079648|ref|XP_968350.1| PREDICTED: similar to Cuticular protein 47Ef CG13214-PA [Tribolium
castaneum]
Length = 1009
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 43/164 (26%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRI 391
++ +VVGIDCEWKPN+ G F D++ + +P++
Sbjct: 687 LQDVEVVGIDCEWKPNFGFG-----------------FTSDILMIKHSLPEL-------- 721
Query: 392 LQSPGILKLGYNF---QCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKI 448
NF Q L + LE + + ++Q L L +
Sbjct: 722 -----------NFTPKQVGFLDLLSLWKLLEKYPKVVLPYEVQG----SGPSLGTLVNQC 766
Query: 449 LGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSC 492
LG L+K+ + SNWE+RPL +QL YAALDA L++++ ++ C
Sbjct: 767 LGRPLDKSDQFSNWEKRPLRNSQLVYAALDAYCLIEVYDVIKGC 810
>gi|356523237|ref|XP_003530248.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Glycine
max]
Length = 212
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 20/155 (12%)
Query: 337 VVGIDCEWKPNYVKGCKM-NKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
+VG+D EWKPN + N V+ +Q+ IF ++ A +P L S L +P
Sbjct: 58 IVGLDVEWKPNTRPNMQPPNPVATLQLCIGHNCLIFQIL-YAPLIPRALSS----FLNNP 112
Query: 396 GILKLGYNFQCDIKQLAHSY-------GELECFKHYEMLLDIQNVFKEPKGGLSGLAEKI 448
++ +G Q D +L Y GEL E+ VF+ GL+ L +
Sbjct: 113 DVIFVGVGIQEDADKLLRDYNLRVTNVGELRSLAAEEL-----QVFQLQWAGLAALGHYV 167
Query: 449 LGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVV 481
LG ++K S W+ R L+ Q+ YAA+DA V
Sbjct: 168 LGFEIDKPENVTMSRWDNRYLTDEQVAYAAIDAFV 202
>gi|158523201|ref|YP_001531071.1| 3'-5' exonuclease [Desulfococcus oleovorans Hxd3]
gi|158512027|gb|ABW68994.1| 3'-5' exonuclease [Desulfococcus oleovorans Hxd3]
Length = 382
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 83/182 (45%), Gaps = 19/182 (10%)
Query: 314 EDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDL 373
+ +V+ GL + + +E VV +D E + KV ++QI + F+ D
Sbjct: 7 QPFTFVNTPSGLAQVVHRLERVPVVAVDLEADSLH---HFTEKVCLIQIGVNGDAFLIDP 63
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYG-ELECFKHYEM---LLD 429
+ L++ S L PG++K+ + D++ L +G + E+ L
Sbjct: 64 LALSDL------SSLKPFFADPGVIKVLHGADYDVRSLYRDFGITITGLFDSEIASRFLG 117
Query: 430 IQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
+Q+ GL+ + + G ++K R +W QRPL + L YAALD L+ ++H +
Sbjct: 118 VQST------GLNDVVNRRFGVTMDKGCRKQDWTQRPLPEKMLSYAALDVRYLVDLYHQL 171
Query: 490 RS 491
++
Sbjct: 172 QN 173
>gi|302803390|ref|XP_002983448.1| hypothetical protein SELMODRAFT_118353 [Selaginella moellendorffii]
gi|300148691|gb|EFJ15349.1| hypothetical protein SELMODRAFT_118353 [Selaginella moellendorffii]
Length = 200
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASD-EMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
V+G D EWKP++ +G + +++Q+ D ++F + +P L ++L+
Sbjct: 42 VLGFDTEWKPSFERGAVPGRTAVLQLCLDSSRCYVFHIFH--SGIPPQLQ----KLLEEE 95
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNK 455
I K G D+ +L YG L Q + + LS LAE++ ++K
Sbjct: 96 TIWKAGIGISGDVSKLKLDYGVTVTGSVDLSALANQKLKRSQSWSLSSLAEELTCKVIDK 155
Query: 456 TR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
R +WE +PLS QL YAA DA L ++
Sbjct: 156 PTDIRCGDWELQPLSPAQLSYAATDAFASLHLYQ 189
>gi|261880482|ref|ZP_06006909.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270332821|gb|EFA43607.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 253
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 85/166 (51%), Gaps = 15/166 (9%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
KA+ ++ ++G+D E +P++ +G + ++V ++Q+++ + F+F L L P
Sbjct: 37 KAVDYLLSSDILGVDTETRPSFHRG-EQHQVCLLQVSNRDTCFLFRL-HLTGITP----- 89
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE---PKGGLSG 443
+ R+L+ + K+G ++ DI+ L E F + +D+Q++ E L
Sbjct: 90 AIKRLLEDTTVKKIGLSWHDDIRGLQAR----ENFTP-GLFVDLQDIVPELGVKDLSLQK 144
Query: 444 LAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L G ++K +R SNWE LS Q +YAA+DA + ++ +
Sbjct: 145 LYANFFGKKISKRQRLSNWEAAVLSDKQKQYAAIDAWSCIHLYEEI 190
>gi|359729247|ref|ZP_09267943.1| ribonuclease D [Leptospira weilii str. 2006001855]
gi|417777730|ref|ZP_12425544.1| 3'-5' exonuclease [Leptospira weilii str. 2006001853]
gi|410782027|gb|EKR66592.1| 3'-5' exonuclease [Leptospira weilii str. 2006001853]
Length = 388
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
D I VD + L + + + ID E Y +KV ++QI++ +I D +
Sbjct: 6 DYIVVDTIRSLQLVLITLSQADSISIDTESSGYY---TYFSKVCLIQISAKGKNYIIDPL 62
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDI---Q 431
KL LD L + + ILK+ ++ DIK L +G FK ++ + D
Sbjct: 63 KLQN-----LDG-LGNLFEDKKILKIFHSAIDDIKALKKDFG----FK-FQNIADTGFSS 111
Query: 432 NVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
+ + L+ L + L+K + SNWE+RPL ++QL+YAALD V L I+ ++
Sbjct: 112 RLLDHEQYSLTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLETIWEKMK 170
>gi|398332245|ref|ZP_10516950.1| ribonuclease III [Leptospira alexanderi serovar Manhao 3 str. L 60]
gi|456860990|gb|EMF79700.1| 3'-5' exonuclease [Leptospira weilii serovar Topaz str. LT2116]
Length = 388
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
D I VD + L + + + ID E Y +KV ++QI++ +I D +
Sbjct: 6 DYIVVDTIRSLQLVLITLSQADSISIDTESSGYY---TYFSKVCLIQISAKGKNYIIDPL 62
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDI---Q 431
KL LD L + + ILK+ ++ DIK L +G FK ++ + D
Sbjct: 63 KLQN-----LDG-LGNLFEDKKILKIFHSAIDDIKALKKDFG----FK-FQNIADTGFSS 111
Query: 432 NVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
+ + L+ L + L+K + SNWE+RPL ++QL+YAALD V L I+ ++
Sbjct: 112 RLLDHEQYSLTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLETIWEKMK 170
>gi|302812014|ref|XP_002987695.1| hypothetical protein SELMODRAFT_126531 [Selaginella moellendorffii]
gi|300144587|gb|EFJ11270.1| hypothetical protein SELMODRAFT_126531 [Selaginella moellendorffii]
Length = 184
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
V G+D EWKPN V G + NKV+++QI + I + + + +PD L L S
Sbjct: 29 VFGVDLEWKPNRVMG-EENKVALIQICGETECLIVQMCYI-DQIPDALVEFLKN--SSSK 84
Query: 397 ILKLGYNFQCDIKQLAHSYGELECFKHYEM-LLDIQNVFKEP--KGGLSGLAEKILGAGL 453
+ G + D ++L +G L C E+ +L + + + GL +A ++G G+
Sbjct: 85 AMFGGVGVKNDAEKLERDHG-LVCKGTVELGVLATEKLGNQQLRNQGLKKMASIVIGLGM 143
Query: 454 NKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
+K +R SNWE LS Q+ YA +DA V I + S
Sbjct: 144 DKPKRVTMSNWENLHLSDAQVNYACVDAWVSYAILQKLLS 183
>gi|70728873|ref|YP_258622.1| ribonuclease D [Pseudomonas protegens Pf-5]
gi|68343172|gb|AAY90778.1| ribonuclease D [Pseudomonas protegens Pf-5]
Length = 377
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI + ++ D
Sbjct: 4 DIHWIRDNDSLGQLCAQWQQLPFVALDTE----FMRVDTFYPIAALLQIGDGQRAYLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + P L +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LTIDNWQP------LAALLENPAVVKVVHACSEDLEVLLRLTGSLPA-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++LG L K S+W QRPLS+ Q+ YAA DAV L Q+F +R
Sbjct: 113 NLGFSMGYSRLVQEVLGIDLPKGETRSDWLQRPLSETQVSYAAEDAVHLAQVFTELRP 170
>gi|421099052|ref|ZP_15559712.1| 3'-5' exonuclease [Leptospira borgpetersenii str. 200901122]
gi|410797786|gb|EKR99885.1| 3'-5' exonuclease [Leptospira borgpetersenii str. 200901122]
Length = 388
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
D I VD + L + + + ID E Y +KV ++QI++ +I D +
Sbjct: 6 DYIVVDTIRSLQLVLITLSQADSISIDTESSGYY---TYFSKVCLIQISAKGKNYIIDPL 62
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDI---Q 431
KL LD L + + ILK+ ++ DIK L +G FK ++ + D
Sbjct: 63 KLQN-----LDG-LGNLFEDKKILKIFHSAIDDIKALKKDFG----FK-FQNIADTGFSS 111
Query: 432 NVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
+ + L+ L + L+K + SNWE+RPL ++QL+YAALD V L I+ ++
Sbjct: 112 RLLDHEQYSLTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLETIWEKMK 170
>gi|302802887|ref|XP_002983197.1| hypothetical protein SELMODRAFT_118004 [Selaginella moellendorffii]
gi|300148882|gb|EFJ15539.1| hypothetical protein SELMODRAFT_118004 [Selaginella moellendorffii]
Length = 184
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
V G+D EWKPN V G + NKV+++QI + I + + + +PD L L S
Sbjct: 29 VFGVDLEWKPNRVMG-EENKVALIQICGETECLIVQMCYI-DQIPDALVEFLKN--SSSK 84
Query: 397 ILKLGYNFQCDIKQLAHSYGELECFKHYEM-LLDIQNVFKEP--KGGLSGLAEKILGAGL 453
+ G + D ++L +G L C E+ +L + + + GL +A ++G G+
Sbjct: 85 AMFGGVGVKNDAEKLERDHG-LVCKGTVELGVLATEKLGNQRLRNQGLKKMASIVIGLGM 143
Query: 454 NKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
+K +R SNWE LS Q+ YA +DA V I + S
Sbjct: 144 DKPKRVTMSNWENLHLSDAQVNYACVDAWVSYAILQKLLS 183
>gi|317484427|ref|ZP_07943341.1| 3'-5' exonuclease [Bilophila wadsworthia 3_1_6]
gi|316924315|gb|EFV45487.1| 3'-5' exonuclease [Bilophila wadsworthia 3_1_6]
Length = 198
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 95/186 (51%), Gaps = 22/186 (11%)
Query: 308 LKELVVEDIIWVDEVDG-LHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDE 366
L L E + + + +G + +A+ ++ ++G D E +P++ KG K S++Q+A E
Sbjct: 21 LPMLAYEGEVMLVQTEGEMARALNFLKKETLLGFDTESRPSFKKG-KSYPTSLIQLAGSE 79
Query: 367 MVFIFDLIKLAEDVPDVLDSC--LTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHY 424
+V + L ++ C L +L PGI+K G + DI+ L +L F
Sbjct: 80 LVVLIRL--------NLTPFCGALAGLLADPGIIKAGVAIRDDIRALQ----KLHEFTPG 127
Query: 425 EMLLDIQNVFKEPKG----GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAV 480
L D+ + K+ +G GL LA +++G ++K + SNW ++ L+ Q+ YAA DA
Sbjct: 128 G-LADLAEMAKQ-RGIKAQGLRTLAAQLMGCRISKAAQCSNWAKKTLTPQQIRYAATDAW 185
Query: 481 VLLQIF 486
+ +I+
Sbjct: 186 IGREIY 191
>gi|317152629|ref|YP_004120677.1| 3'-5' exonuclease [Desulfovibrio aespoeensis Aspo-2]
gi|316942880|gb|ADU61931.1| 3'-5' exonuclease [Desulfovibrio aespoeensis Aspo-2]
Length = 203
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 80/162 (49%), Gaps = 12/162 (7%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
+A+ +EG ++G D E +P + KG + S++Q+A+ V++F + ++L
Sbjct: 43 QALREMEGETLLGFDTETRPVFKKGKRPGPPSLIQLATASCVYVFQI--------NLLPL 94
Query: 387 C--LTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGL 444
C L +L ++K G + DI L G + + L DI + GL +
Sbjct: 95 CNGLCDLLADKEVIKTGVAVRDDILGLQKMAGFTP--QQFIDLSDITAAARMQTHGLRNM 152
Query: 445 AEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
A +LG ++K+ + SNW + L+ Q+ YAA DA + +++
Sbjct: 153 AANLLGFRISKSAQCSNWAKEHLTPQQITYAATDAWISRELY 194
>gi|290490726|dbj|BAI79323.1| WRN helicase [Gallus gallus]
Length = 1498
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 15/161 (9%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VG D EW P+Y KG KM K++++Q+ ++E ++F + ++ L R+L+
Sbjct: 88 AVGFDIEWPPSYTKG-KMAKIALIQLCVTEEKCYLFHISSMSG-----FPKGLKRLLEDE 141
Query: 396 GILKLGYNFQCDIKQLAHSYGELEC-FKHYEMLLDIQNVFKEPKG--GLSGLAEKILGAG 452
I K+G + D +L G+ E K + L D+ N + K L+GL + + G
Sbjct: 142 TIKKVGVGIEGDHWKL---MGDFEVKLKSFVELADVANEKLKCKEVWSLNGLVKHLFGKQ 198
Query: 453 L--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
L +K+ R NWE+ PL + + YAA DA I+ +++
Sbjct: 199 LLKDKSIRCGNWEKFPLDEERKLYAATDAYAGFIIYQKLKN 239
>gi|120597845|ref|YP_962419.1| 3'-5' exonuclease [Shewanella sp. W3-18-1]
gi|120557938|gb|ABM23865.1| 3'-5' exonuclease [Shewanella sp. W3-18-1]
Length = 301
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 82/164 (50%), Gaps = 9/164 (5%)
Query: 319 VDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAE 378
V + D L + I +V+G D E + ++ +G + + +S++QIA+ + ++F LAE
Sbjct: 97 VVQPDELTTVLQSISKQRVIGFDTETRASFERGVQ-HPLSLIQIATHDTCYLFQHALLAE 155
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPK 438
+ L +L+ ILK+G + D + L +G + ++ + + +
Sbjct: 156 QL-----GLLKPVLEDENILKVGVGLRSDGQALTREWG-INVTPRLDLNWVLAQLGAGKE 209
Query: 439 GGLSGLAEKILGAGLNKTRRN--SNWEQRPLSQNQLEYAALDAV 480
G L +L ++K ++ SNW+Q PL+ Q+ YAALDA+
Sbjct: 210 MGTRQLVATLLQKRIDKPKKVTLSNWQQVPLTSTQIVYAALDAL 253
>gi|418720286|ref|ZP_13279484.1| 3'-5' exonuclease [Leptospira borgpetersenii str. UI 09149]
gi|418738363|ref|ZP_13294758.1| 3'-5' exonuclease [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
gi|410743264|gb|EKQ92007.1| 3'-5' exonuclease [Leptospira borgpetersenii str. UI 09149]
gi|410745856|gb|EKQ98764.1| 3'-5' exonuclease [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
gi|456888486|gb|EMF99469.1| 3'-5' exonuclease [Leptospira borgpetersenii str. 200701203]
Length = 388
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 85/184 (46%), Gaps = 27/184 (14%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
D I VD + L + + + ID E Y +KV ++QI++ +I D +
Sbjct: 6 DYIVVDTIRSLQLVLITLSQADSISIDTESSGYY---TYFSKVCLIQISAKGKNYIIDPL 62
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEM-------- 426
KL LD L + + ILK+ ++ DIK L +G FK + +
Sbjct: 63 KLQN-----LDG-LGNLFEDKKILKIFHSAIDDIKALKKDFG----FKFHNIADTGFSSR 112
Query: 427 LLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
LLD + L+ L + L+K + SNWE+RPL ++QL+YAALD V L I+
Sbjct: 113 LLDHEQY------SLTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLETIW 166
Query: 487 HHVR 490
++
Sbjct: 167 EKMK 170
>gi|116329422|ref|YP_799142.1| ribonuclease III [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116329974|ref|YP_799692.1| ribonuclease III [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|116122166|gb|ABJ80209.1| Ribonuclease III [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116123663|gb|ABJ74934.1| Ribonuclease III [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
Length = 388
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 85/184 (46%), Gaps = 27/184 (14%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
D I VD + L + + + ID E Y +KV ++QI++ +I D +
Sbjct: 6 DYIVVDTIRSLQLVLITLSQADSISIDTESSGYY---TYFSKVCLIQISAKGKNYIIDPL 62
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEM-------- 426
KL LD L + + ILK+ ++ DIK L +G FK + +
Sbjct: 63 KLQN-----LDG-LGNLFEDKKILKIFHSAIDDIKALKKDFG----FKFHNIADTGFSSR 112
Query: 427 LLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
LLD + L+ L + L+K + SNWE+RPL ++QL+YAALD V L I+
Sbjct: 113 LLDHEQY------SLTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLETIW 166
Query: 487 HHVR 490
++
Sbjct: 167 EKMK 170
>gi|388515667|gb|AFK45895.1| unknown [Medicago truncatula]
Length = 236
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 20/179 (11%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
W+ E L AI +G+D EW+PN +G + N + +Q+ ++ IF LI +
Sbjct: 68 WLLETQSLSPAI--------IGLDIEWRPNSQRG-QSNPAATLQLYTNNRCLIFQLIH-S 117
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEP 437
+P + L L +P +G + DI+++ Y L + ++ +V ++
Sbjct: 118 PSIP----TFLFTFLSNPNNRFVGVGIESDIEKIIEDYN-LTVANYVDLRNLAADVLEDR 172
Query: 438 ---KGGLSGLAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
+ G+ LAE++LG + K R S W+ L +Q++YA +DA + +I + S
Sbjct: 173 DLLRSGIKTLAERVLGKIVEKPSRITRSRWDNPMLDWDQVKYATVDAFLSFEIARRLYS 231
>gi|391335538|ref|XP_003742147.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Metaseiulus occidentalis]
Length = 744
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 15/160 (9%)
Query: 335 CKVVGIDCEWKPNYVKGCKMNKVSIMQIASD-EMVFIFDLIKLAEDVPDVLDSCLTRILQ 393
C+++G+DCEW N G + V+++Q+A + E+ + L ++ + + RIL
Sbjct: 87 CRLLGVDCEW-VNVNSGTHL--VALLQMAPNPELCVLIRLCQMQMPLE------VRRILA 137
Query: 394 SPGILKLGYNFQCDIKQLAHSYG-ELE-CFKHYEMLLDIQNVFKEPKG-GLSGLAEKILG 450
ILK G D ++L YG E+ C M L++ +G L+ L+ + G
Sbjct: 138 DHNILKFGVAIVEDARRLHTDYGVEMNGCLDLRYMALEMGCEENTSQGLSLATLSSRFAG 197
Query: 451 AGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHH 488
LNK+ R SNWE R L++ Q YAA DA ++I H
Sbjct: 198 YELNKSPLLRGSNWEARRLTKAQCVYAANDAFAGIRIARH 237
>gi|76628167|ref|XP_587937.2| PREDICTED: exonuclease 3'-5' domain-containing protein 2 [Bos
taurus]
gi|297479852|ref|XP_002691029.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 [Bos
taurus]
gi|296483016|tpg|DAA25131.1| TPA: exonuclease 3'-5' domain containing 2 [Bos taurus]
Length = 628
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 13/188 (6%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV--PDVLDSCLT 389
IE V+GIDCEW K + +S++Q+AS + L++L + + L L
Sbjct: 106 IEDFPVLGIDCEW---VNSEGKASPLSLLQMASPSGFCV--LVRLPKLICGGKTLPKTLL 160
Query: 390 RILQSPGILKLGYNFQCDIKQLAHSYGEL--ECFKHYEMLLDIQNVFKEPKGGLSGLAEK 447
IL ILK+G D +L YG + C + + +N L L+E
Sbjct: 161 DILADGTILKVGVGCSEDASKLLQDYGLVVKGCLDLRYLAMRQRNNLLSNGLSLKSLSET 220
Query: 448 ILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV--RSCSQPTDVSEGHD 503
+L L+K+ R SNW+ L+++Q+ YAA DA + + +F H+ S+ + + E D
Sbjct: 221 VLNFPLDKSLLLRCSNWDAENLTEDQVIYAARDAQISVALFLHLLGYPFSRNSTLEENDD 280
Query: 504 KIEWKSYI 511
I W+ +
Sbjct: 281 HIVWRKIL 288
>gi|440897356|gb|ELR49067.1| Exonuclease 3'-5' domain-containing protein 2 [Bos grunniens mutus]
Length = 627
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 13/188 (6%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV--PDVLDSCLT 389
IE V+GIDCEW K + +S++Q+AS + L++L + + L L
Sbjct: 105 IEDFPVLGIDCEW---VNSEGKASPLSLLQMASPSGFCV--LVRLPKLICGGKTLPKTLL 159
Query: 390 RILQSPGILKLGYNFQCDIKQLAHSYGEL--ECFKHYEMLLDIQNVFKEPKGGLSGLAEK 447
IL ILK+G D +L YG + C + + +N L L+E
Sbjct: 160 DILADGTILKVGVGCSEDASKLLQDYGLVVKGCLDLRYLAMRQRNNLLSNGLSLKSLSET 219
Query: 448 ILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV--RSCSQPTDVSEGHD 503
+L L+K+ R SNW+ L+++Q+ YAA DA + + +F H+ S+ + + E D
Sbjct: 220 VLNFPLDKSLLLRCSNWDAENLTEDQVIYAARDAQISVALFLHLLGYPFSRNSTLEENDD 279
Query: 504 KIEWKSYI 511
I W+ +
Sbjct: 280 HIVWRKIL 287
>gi|449274706|gb|EMC83784.1| Exonuclease 3'-5' domain-containing protein 2 [Columba livia]
Length = 607
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 90/185 (48%), Gaps = 20/185 (10%)
Query: 311 LVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDE---- 366
+V E W D V+ L K +E V+GIDCEW V+G K N VS++Q+AS
Sbjct: 83 IVSEQEEW-DRVEPLLKK--ELEQWPVLGIDCEWV--SVEG-KANPVSLLQMASFSGFCV 136
Query: 367 MVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYG---ELECFKH 423
+V + L+ + +P L I+ +LK+G D +L H YG +
Sbjct: 137 LVRLSRLVASGQTIPKTL----LDIMADSAVLKVGVGCWEDACKLLHDYGLPVKGSVDLR 192
Query: 424 YEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVV 481
Y + +++ L LAEK+L L+K+ R SNWE L+ +Q+ YAA DA V
Sbjct: 193 YLAMRQRKDLLHSCLS-LKSLAEKVLNCPLDKSPHVRCSNWEAEELTPDQVLYAARDAQV 251
Query: 482 LLQIF 486
+ +F
Sbjct: 252 SVALF 256
>gi|348573292|ref|XP_003472425.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Cavia porcellus]
Length = 619
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 96/190 (50%), Gaps = 18/190 (9%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV--PDVLDSCLT 389
+E V+G+DCEW ++G K + +S++Q+AS + L++L + +L L
Sbjct: 98 LEDFPVLGMDCEWV--NLEG-KASPLSLLQMASPSGFCV--LVRLPRLIYGGKMLPRTLL 152
Query: 390 RILQSPGILKLGYNFQCDIKQLAHSYGEL--ECFKHYEMLLDIQNVFKEPKGGLS--GLA 445
IL ILK+G D ++L YG + C + + +N+ GLS L+
Sbjct: 153 DILADATILKVGVGCSEDARKLLQDYGLIVRGCLDLRYLAVRQRNLLCS---GLSLKSLS 209
Query: 446 EKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSC--SQPTDVSEG 501
E +L L+K+ R SNW+ L+++Q+ YAA DA + + +F H+ C S+ + +
Sbjct: 210 ETVLNFPLDKSLLLRCSNWDAENLTEDQVTYAARDAQISVALFLHLLGCPFSRNSPMEAS 269
Query: 502 HDKIEWKSYI 511
D + W+ +
Sbjct: 270 IDHVGWRKVL 279
>gi|294654453|ref|XP_456510.2| exosome component 3'-5' exonuclease [Debaryomyces hansenii CBS767]
gi|199428893|emb|CAG84465.2| DEHA2A04334p [Debaryomyces hansenii CBS767]
Length = 776
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 82/181 (45%), Gaps = 22/181 (12%)
Query: 317 IWVDEVDGLHKAICHIEGCKVVGIDCE---WKPNYVKGCKMNKVSIMQIASDEMVFIFDL 373
IWVD VD L++ I + + ID E ++ Y C +MQI+S + +I D
Sbjct: 232 IWVDSVDVLNEMISLLSEQSEIAIDLEHHDYRSYYGIVC------LMQISSRDQDWIIDT 285
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+KL +D+ L ++ +P I+K+ + DI L G + L D +
Sbjct: 286 LKLRDDL-----ESLNKVFTNPDIVKVFHGAFMDIIWLQRDLG-----LYIVSLFDTYHA 335
Query: 434 FKE---PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
K+ PK L+ L E +K + ++W RPLS L YA D LL I+ +R
Sbjct: 336 SKKLGFPKFSLAYLLETFANFKTSKKYQLADWRIRPLSPPMLAYARSDTHFLLNIYDQLR 395
Query: 491 S 491
+
Sbjct: 396 N 396
>gi|111226700|ref|XP_642107.2| 3'-5' exonuclease domain-containing protein [Dictyostelium
discoideum AX4]
gi|90970724|gb|EAL68469.2| 3'-5' exonuclease domain-containing protein [Dictyostelium
discoideum AX4]
Length = 686
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 20/163 (12%)
Query: 337 VVGIDCEW-KPNYVKGCKMN----------KVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
++G D EW PN + K++ KV+++Q++S F+ + ++ E +P
Sbjct: 163 IIGFDAEWGNPNSIFDDKIDDKTTKTHYNHKVALIQLSSKNETFLIQVSQM-EKIP---- 217
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLA 445
L +IL P ++K+G D + ++ + K Y L+ I + GL+ LA
Sbjct: 218 ISLEQILTDPRLIKVGVAVSQDAATIFQTFSVVT--KGYVDLVPIARLTNYEGNGLASLA 275
Query: 446 EKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
++ LNK+ R +WE + LS +Q+ YAA DA V +IF
Sbjct: 276 LNVMNVTLNKSNKIRCGHWENKKLSNDQIHYAAADAWVGREIF 318
>gi|340345979|ref|ZP_08669109.1| 3'-5' exonuclease domain protein [Prevotella dentalis DSM 3688]
gi|433651659|ref|YP_007278038.1| ribonuclease D [Prevotella dentalis DSM 3688]
gi|339612966|gb|EGQ17762.1| 3'-5' exonuclease domain protein [Prevotella dentalis DSM 3688]
gi|433302192|gb|AGB28008.1| ribonuclease D [Prevotella dentalis DSM 3688]
Length = 271
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 88/168 (52%), Gaps = 19/168 (11%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
KA+ ++ ++G+D E KP + +G + ++V ++Q+++ F+F L L P
Sbjct: 37 KAVNYLLSSDILGVDTETKPAFHRG-EQHQVGLLQVSNRTTCFLFRL-NLTGITP----- 89
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAE 446
+ R+L+ + K+G ++ D++ L E F + +D+Q++ P+ G+ L+
Sbjct: 90 AIKRLLEDTSVKKVGLSWHDDLRGLQAK----EPFAP-GLFIDLQDMV--PQMGIEDLSL 142
Query: 447 KIL-----GAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
+ L G ++K +R SNWE L + Q +YAA+DA + ++ +
Sbjct: 143 QKLYANFFGRKISKRQRLSNWEAPILDERQKQYAAIDAWACIHLYEEI 190
>gi|356523231|ref|XP_003530245.1| PREDICTED: Werner Syndrome-like exonuclease-like [Glycine max]
Length = 238
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 25/179 (13%)
Query: 318 WVDEV--DGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
W+ V D H+ H + VG+D EW+PN + + N V+ +Q+ E +F ++
Sbjct: 66 WISTVLRDHQHQ---HQQRVLTVGLDIEWRPNTQRNMQ-NPVATLQLCVAERCLVFQILH 121
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYG-------ELECFKHYEMLL 428
+ +P L L P I +G Q D+++L Y +L F E L
Sbjct: 122 -SPSIP----PSLVSFLADPNITFVGVGIQEDMEKLLEDYNLNVANVRDLRSFA-AERLG 175
Query: 429 DIQNVFKEPKGGLSGLAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQI 485
D++ K + GL L ++LG + K +R S W+ L+ Q++YAA+DA + +I
Sbjct: 176 DLE--LK--RAGLKSLGLRVLGLEVAKPKRVTRSRWDNPWLTAQQVQYAAVDAFLSYEI 230
>gi|167516320|ref|XP_001742501.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779125|gb|EDQ92739.1| predicted protein [Monosiga brevicollis MX1]
Length = 880
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 44/157 (28%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
++VGID EW+ S++Q+A + VF+ D + P
Sbjct: 737 RLVGIDTEWR------SPRPTCSLIQVAMGDDVFLLDAV--------------------P 770
Query: 396 GILKLGYNFQC-DIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLN 454
G+ Y ++ D++ LA S+ + ++ + GL + +LG L+
Sbjct: 771 GMGDAAYAYEVVDVQPLAQSW-----------------LQRKKRPGLGTVVAAVLGQTLD 813
Query: 455 KTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
K + SNW++RPL +Q EYAA+DA L ++ + S
Sbjct: 814 KRNQCSNWDRRPLRPDQAEYAAIDAWCLAPLYEQLVS 850
>gi|237681098|ref|NP_598559.2| exonuclease 3'-5' domain-containing protein 2 [Mus musculus]
Length = 650
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 97/204 (47%), Gaps = 20/204 (9%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDE----MVFIFDLIKLAEDVPDVLDSC 387
+E V+GIDCEW ++G K + +S++Q+AS +V + LI +P
Sbjct: 128 LEDFPVLGIDCEWV--NLEG-KASPLSLLQMASPSGFCALVRLPRLIYGGRTLP----RT 180
Query: 388 LTRILQSPGILKLGYNFQCDIKQLAHSYGEL--ECFKHYEMLLDIQNVFKEPKGGLSGLA 445
L IL ILK+G D +L YG + C + + N L LA
Sbjct: 181 LLDILADGAILKVGVGCSEDANKLLQDYGLIVRGCLDLRYLAMKQGNNILCNGLSLKSLA 240
Query: 446 EKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV--RSCSQPTDVSEG 501
E IL L+K+ R SNW+ L+++Q+ YAA DA + + +F H+ S+ + E
Sbjct: 241 ETILNFPLDKSLLLRCSNWDAENLTEDQVTYAARDAQISVALFLHLLGYPFSRDSYEEES 300
Query: 502 HDKIEWKSYI---VSHMDNPKKSK 522
D+I W+ + + +D P +SK
Sbjct: 301 TDQINWQKALERCRNMVDIPFRSK 324
>gi|148670716|gb|EDL02663.1| exonuclease 3''-5'' domain-like 2, isoform CRA_a [Mus musculus]
Length = 652
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 97/204 (47%), Gaps = 20/204 (9%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDE----MVFIFDLIKLAEDVPDVLDSC 387
+E V+GIDCEW ++G K + +S++Q+AS +V + LI +P
Sbjct: 130 LEDFPVLGIDCEWV--NLEG-KASPLSLLQMASPSGFCALVRLPRLIYGGRTLP----RT 182
Query: 388 LTRILQSPGILKLGYNFQCDIKQLAHSYGEL--ECFKHYEMLLDIQNVFKEPKGGLSGLA 445
L IL ILK+G D +L YG + C + + N L LA
Sbjct: 183 LLDILADGAILKVGVGCSEDANKLLQDYGLIVRGCLDLRYLAMKQGNNILCNGLSLKSLA 242
Query: 446 EKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV--RSCSQPTDVSEG 501
E IL L+K+ R SNW+ L+++Q+ YAA DA + + +F H+ S+ + E
Sbjct: 243 ETILNFPLDKSLLLRCSNWDAENLTEDQVTYAARDAQISVALFLHLLGYPFSRDSYEEES 302
Query: 502 HDKIEWKSYI---VSHMDNPKKSK 522
D+I W+ + + +D P +SK
Sbjct: 303 TDQINWQKALERCRNMVDIPFRSK 326
>gi|426408211|ref|YP_007028310.1| ribonuclease D [Pseudomonas sp. UW4]
gi|426266428|gb|AFY18505.1| ribonuclease D [Pseudomonas sp. UW4]
Length = 377
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++Q+ E ++ D
Sbjct: 4 DIHWIRDNDSLGRFCAEWQQLPFVALDTE----FMRVDTFYPIAGLLQVGDGERAYLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + P L +L++P +LK+ + D++ L G L ++ L +
Sbjct: 60 LTIDNWQP------LAALLENPAVLKVVHACSEDLEVLLRLTGSLPA-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++LG L K S+W QRPLS+ Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLGIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAEVFVKLRP 170
>gi|74147230|dbj|BAE27515.1| unnamed protein product [Mus musculus]
Length = 650
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 97/204 (47%), Gaps = 20/204 (9%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDE----MVFIFDLIKLAEDVPDVLDSC 387
+E V+GIDCEW ++G K + +S++Q+AS +V + LI +P
Sbjct: 128 LEDFPVLGIDCEWV--NLEG-KASPLSLLQMASPSGFCALVRLPRLIYGGRTLP----RT 180
Query: 388 LTRILQSPGILKLGYNFQCDIKQLAHSYGEL--ECFKHYEMLLDIQNVFKEPKGGLSGLA 445
L IL ILK+G D +L YG + C + + N L LA
Sbjct: 181 LLDILADGAILKVGVGCSEDANKLLQDYGLIVRGCLDLRYLAMKQGNNILCNGLSLKSLA 240
Query: 446 EKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV--RSCSQPTDVSEG 501
E IL L+K+ R SNW+ L+++Q+ YAA DA + + +F H+ S+ + E
Sbjct: 241 ETILNFPLDKSLLLRCSNWDAENLTEDQVTYAARDAQISVALFLHLLGYPFSRDSYEEES 300
Query: 502 HDKIEWKSYI---VSHMDNPKKSK 522
D+I W+ + + +D P +SK
Sbjct: 301 TDQINWQKALERCRNMVDIPFRSK 324
>gi|414075892|ref|YP_006995210.1| hypothetical protein ANA_C10598 [Anabaena sp. 90]
gi|413969308|gb|AFW93397.1| hypothetical protein ANA_C10598 [Anabaena sp. 90]
Length = 909
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 89/201 (44%), Gaps = 18/201 (8%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASD---EMVFIFDLI 374
++ E ++K I + K + ID E Y K+ + ++ +D E +IFD++
Sbjct: 3 YLTEASEIYKQISQLSLSKTLWIDTEIADWYTDKPKLALIQVLANYTDLTGESAYIFDVL 62
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF 434
D PD+ + +I+ +P I K+ +N D+K L E ++ L I
Sbjct: 63 ----DKPDLAVYFINQIMVNPQIEKVFHNAGFDLKYLGK-----ELAQNVTCTLKIARKI 113
Query: 435 KEPKGGLSGLAEKILGAGL------NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHH 488
+ + L K L A L + S+W +RPL+Q QL YAA+D V L + +
Sbjct: 114 TKEVLETTNLKLKTLAAELCQFSHVDAEEGTSDWGKRPLTQKQLNYAAMDTVYLATVHYR 173
Query: 489 VRSCSQPTDVSEGHDKIEWKS 509
+ S P ++ + + KS
Sbjct: 174 LLEISNPDVINRVFNMVNHKS 194
>gi|281420237|ref|ZP_06251236.1| 3'-5' exonuclease domain protein [Prevotella copri DSM 18205]
gi|281405732|gb|EFB36412.1| 3'-5' exonuclease domain protein [Prevotella copri DSM 18205]
Length = 205
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 86/182 (47%), Gaps = 9/182 (4%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
I+ VD+ + A+ + ++G+D E +P++ +G + VS++Q+++ + ++F L
Sbjct: 25 IVVVDKPEDTEAAVNDLLSHYILGVDTETRPSFKRG-QAYHVSLLQVSTHDTCYLFRLHH 83
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK 435
+ + R+L+ + K+G ++ D+ QL H + ++ L D+ F
Sbjct: 84 TG------ITPAIIRLLEDTTVPKVGLSWHDDLLQL-HKRAAFKA-GYFIELQDVAKNFG 135
Query: 436 EPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQP 495
L L + ++K +R SNWE L ++Q YAA DA + ++ + S
Sbjct: 136 IADMSLQKLYANLFHQKISKAQRLSNWEASDLKESQALYAATDAWCCINLYEEFKRLSAT 195
Query: 496 TD 497
D
Sbjct: 196 GD 197
>gi|71004700|ref|XP_757016.1| hypothetical protein UM00869.1 [Ustilago maydis 521]
gi|46096710|gb|EAK81943.1| hypothetical protein UM00869.1 [Ustilago maydis 521]
Length = 646
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 78/185 (42%), Gaps = 35/185 (18%)
Query: 329 ICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCL 388
+ H G +G+D EW NY + +++ +++QI S ++ I ++ +P +L
Sbjct: 205 LLHCLGPGPMGLDLEW--NYSRA-GVHRTALVQICSSSLILIIHTSAMSHRIPPLL---- 257
Query: 389 TRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV--------FKEPKG- 439
ILQ P I+K G + D +L Y +D +NV +P
Sbjct: 258 KHILQDPSIVKTGVAIKNDALKLQRDYA-----------IDARNVVELSNFVKLAQPHRW 306
Query: 440 -------GLSGLAEKILGAGLNK-TRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
L L LG L K + R S+WE+ PL Q+EYAA D L++
Sbjct: 307 AGHSHLISLRDLTRIYLGRKLRKDSVRVSDWERYPLDAKQIEYAASDTFASLEVLRAAAE 366
Query: 492 CSQPT 496
+PT
Sbjct: 367 YFKPT 371
>gi|115438991|ref|NP_001043775.1| Os01g0660800 [Oryza sativa Japonica Group]
gi|55773822|dbj|BAD72360.1| hypothetical protein [Oryza sativa Japonica Group]
gi|55773961|dbj|BAD72488.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113533306|dbj|BAF05689.1| Os01g0660800 [Oryza sativa Japonica Group]
gi|125527143|gb|EAY75257.1| hypothetical protein OsI_03144 [Oryza sativa Indica Group]
Length = 199
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
+VG+D EW+P+Y G N V+++Q+ D IF L+ A+ VP L R L
Sbjct: 47 IVGLDVEWRPSY--GPAQNPVALLQLCVDRRCLIFQLL-YADYVP----GSLRRFLAGAA 99
Query: 397 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE--PKGGLSGLAEKILGAGLN 454
+G D ++L+ +G L Q + + + GL + ++GA L
Sbjct: 100 DCFVGVGVDKDAERLSDDHGLTVANTADLRPLAAQRLGRPELSQAGLQAVVRAVMGADLV 159
Query: 455 KTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
K +R S W+ LS Q+ YA +DA V ++ +
Sbjct: 160 KPQRVTMSRWDASCLSNEQIRYACIDAYVSFEVGRRL 196
>gi|323454533|gb|EGB10403.1| hypothetical protein AURANDRAFT_62671 [Aureococcus anophagefferens]
Length = 3786
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 290 FLKTREPEAGFVHSRFLHLKELVVED-------IIWVDEVDGLHKAICHIEGCKVVGIDC 342
FL +AG V RF LK+ + ++ +D+ G +A+ + + V +D
Sbjct: 2872 FLDNPARDAGGVLRRFDSLKDTSAPEKFSWSGPVVCIDDAAGDARALAALRDVRRVAVDM 2931
Query: 343 EWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGY 402
EW+ ++ + ++QI ++V+++ V D + + L IL++ GI K+G
Sbjct: 2932 EWRAQ-----PLSNIRVIQIGVKDVVYLWR-------VKDSVPAGLAAILRNEGIEKIGV 2979
Query: 403 NFQCDIKQLAHSYGELECFKHYEMLLDIQN-VFKEPKG--GLSGLAEKILGAGLNK---- 455
NFQ DI +L Y +E L D+ N K K L+ L ++L L+K
Sbjct: 2980 NFQGDITRLTKQYEGVEVKGEIIELSDLANDTLKSQKRRWSLADLVMELLNRTLDKELGG 3039
Query: 456 TRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
R W++ PL Q+ +YAA DA +
Sbjct: 3040 GGRYGRWDEWPLDQDAQQYAANDAAATFMV 3069
>gi|242058237|ref|XP_002458264.1| hypothetical protein SORBIDRAFT_03g030190 [Sorghum bicolor]
gi|241930239|gb|EES03384.1| hypothetical protein SORBIDRAFT_03g030190 [Sorghum bicolor]
Length = 202
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
W+ E+ +H+ + VG+D EW+P+Y N V+ +Q+ IF L+ A
Sbjct: 30 WIAEILSVHRP-GGVGYNITVGLDVEWRPSYRS--YQNPVATLQLCVGRSCLIFQLLH-A 85
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEP 437
+ VP L L GI G D ++L+ +G L+ ++ P
Sbjct: 86 DYVP----GALAEFLGDRGICFFGVGVAADAERLSDDHG-LQVANAVDLRGRAAECMNRP 140
Query: 438 ---KGGLSGLAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ GL L + ++G L K +R S W+ LS Q+ YA +DA V +I
Sbjct: 141 DLRQAGLRALVQAVMGVDLAKPQRVTMSRWDAYCLSHEQIRYACVDAFVSFEI 193
>gi|398805427|ref|ZP_10564401.1| ribonuclease D [Polaromonas sp. CF318]
gi|398091601|gb|EJL82038.1| ribonuclease D [Polaromonas sp. CF318]
Length = 198
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 19/187 (10%)
Query: 308 LKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEM 367
+ L ++ I V D +A+ + G V+G D E KP + K + I+Q+A+
Sbjct: 19 FERLGLDQIEVVSTADRAAQALKDLTGATVLGFDTESKPTFAKNEASDGPHIVQLATLHK 78
Query: 368 VFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEML 427
+IF L ED + +L SP ++K G+ D +++ G + +
Sbjct: 79 AWIFQL----EDAE--CRRAVGLVLSSPAVIKAGFGLGDDQRRIIRKLG-----TDLQGV 127
Query: 428 LDIQNVFKEPKG-----GLSGLAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAV 480
LD+ VF+E +G G+ G + K+++ SNW L++ Q+ YAA DA
Sbjct: 128 LDLNVVFRE-RGYRKDMGVRGAVAVMFNKRFLKSKKAATSNWANERLTEAQIVYAANDAY 186
Query: 481 VLLQIFH 487
L+++
Sbjct: 187 GALRVYQ 193
>gi|421095097|ref|ZP_15555810.1| 3'-5' exonuclease [Leptospira borgpetersenii str. 200801926]
gi|410361807|gb|EKP12847.1| 3'-5' exonuclease [Leptospira borgpetersenii str. 200801926]
Length = 439
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 85/184 (46%), Gaps = 27/184 (14%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
D I VD + L + + + ID E Y +KV ++QI++ +I D +
Sbjct: 57 DYIVVDTIRSLQLVLITLSQADSISIDTESSGYY---TYFSKVCLIQISAKGKNYIIDPL 113
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEM-------- 426
KL LD L + + ILK+ ++ DIK L +G FK + +
Sbjct: 114 KLQN-----LDG-LGNLFEDKKILKIFHSAIDDIKALKKDFG----FKFHNIADTGFSSR 163
Query: 427 LLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
LLD + L+ L + L+K + SNWE+RPL ++QL+YAALD V L I+
Sbjct: 164 LLDHEQY------SLTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLETIW 217
Query: 487 HHVR 490
++
Sbjct: 218 EKMK 221
>gi|405967601|gb|EKC32742.1| Werner syndrome ATP-dependent helicase-like protein [Crassostrea
gigas]
Length = 261
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 14/173 (8%)
Query: 325 LHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDV 383
L+ + ++G VG D EW +Y G + K +++Q+ S + +IF L + +P V
Sbjct: 82 LNTTLTDVDGPSFVGFDMEWPVSYRPG-RQEKTAVLQLCTSADKCYIFHLSCIG-GIPPV 139
Query: 384 LDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDI-----QNVFKEPK 438
L ++L SP + K+G Q D +L YG ++D+ Q + +
Sbjct: 140 L----GQLLSSPRVRKVGVGIQSDFWKLERDYGLSVAPILKSCVVDLSLYANQVLGSKET 195
Query: 439 GGLSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L GL + + +NK R S+W + PL+ Q YAA DA V I+ +
Sbjct: 196 WSLDGLVKHLFQRKINKNPIVRKSDWSEFPLTDIQKSYAATDAYVSYLIYEKL 248
>gi|408388348|gb|EKJ68034.1| hypothetical protein FPSE_11845 [Fusarium pseudograminearum CS3096]
Length = 547
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 24/168 (14%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
KV+G D EW + VS++QIAS V +F + +D D + +I++
Sbjct: 186 KVIGFDLEWLIRHRNTDPRVNVSLIQIASPSRVALFHVALYPKD--DFVAPTFKKIMEDE 243
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSG------------ 443
+ K+G + D +L ++ G +E +L++ ++FK K SG
Sbjct: 244 SVTKVGVCIKGDCTRLKNNLG-IES----RGVLELSHLFKLVKYSKSGELKRINKIMVNL 298
Query: 444 --LAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
+++LG L K R+SNW PLS+ Q+ Y+A DA V LQ++H
Sbjct: 299 AAQTQEVLGLPLFKGNDVRSSNW-MLPLSEQQISYSASDAYVGLQLYH 345
>gi|229496277|ref|ZP_04389997.1| 3'-5' exonuclease domain protein [Porphyromonas endodontalis ATCC
35406]
gi|229316855|gb|EEN82768.1| 3'-5' exonuclease domain protein [Porphyromonas endodontalis ATCC
35406]
Length = 213
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 31/213 (14%)
Query: 293 TREPEAGFVHSRF----LHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNY 348
T+E A H+ F +HL E E D+ +E VVG D E KP +
Sbjct: 9 TKEEIATLSHTAFFPGQIHLVETAEEAEAIFDQ----------LERQSVVGFDTESKPCF 58
Query: 349 VKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDI 408
+G + +V+++QI++ E ++ + K L L +P ILK+G + + D
Sbjct: 59 TRG-ETAEVALIQISTLEDAYLIRVNKTD------FTPRLKAFLANPNILKVGLSLRDDY 111
Query: 409 KQLAHSYGELECFKHYEMLLDIQNV---FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQR 465
K + E++ E +++Q++ + GL + I G ++K++R +NWE
Sbjct: 112 KVMRRR-AEVQP----EGFIELQSLCPAYGIRDAGLQNIYAIIFGERISKSQRVTNWESP 166
Query: 466 PLSQNQLEYAALDAVVLLQIFHHV--RSCSQPT 496
LS Q YAALDA L+I++ + R P+
Sbjct: 167 TLSFKQQLYAALDAYACLRIYNALMERPIPHPS 199
>gi|418293339|ref|ZP_12905249.1| 3'-5' exonuclease [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
gi|379064732|gb|EHY77475.1| 3'-5' exonuclease [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
Length = 211
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 311 LVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFI 370
+ E I D A I +G D E KP + G + ++Q A+ E ++
Sbjct: 24 ITYERIFTPATPDEFRVAADEIAAFSCIGFDTESKPTFKVGEVSSGPHLIQFATPEKAYL 83
Query: 371 FDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDI 430
F + P +++ + +LQ+ I+K+G+ + D +L S +++ + ++ +
Sbjct: 84 FQI-----GAPGCIEAARS-VLQARDIVKIGFGLKSDRSRL-RSKLDIQPNQLLDLGSTL 136
Query: 431 QNVFKEPKGGLSGLAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIF 486
+ K+ + GL G IL A +NK+R SNW + L+ Q YAA DA LQ+F
Sbjct: 137 RYQGKKGQVGLRGAVAGILNARINKSRSVATSNWARAVLTPAQQIYAANDAYAALQVF 194
>gi|304383100|ref|ZP_07365575.1| conserved hypothetical protein [Prevotella marshii DSM 16973]
gi|304335786|gb|EFM02041.1| conserved hypothetical protein [Prevotella marshii DSM 16973]
Length = 218
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 85/176 (48%), Gaps = 15/176 (8%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
II V + KA+ + ++GID E +P + KG + +KVS++Q+++++ F+F L
Sbjct: 26 IIVVQSKEEADKAVAFLLSQTILGIDTETRPAFKKG-QTHKVSLLQVSTNDTCFLFRLNM 84
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK 435
+ L S + L+ + K+G + D+ L + +D+Q+ K
Sbjct: 85 IG------LTSSIKYFLEDSTVPKIGLSLGDDVMALQKRGSFIPG-----NFIDLQDHVK 133
Query: 436 E---PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHH 488
E GL+ L I G ++K + +NW+ L++ Q YAA DA ++++
Sbjct: 134 EIGIQDLGLAKLYANIFGQRISKREQLTNWDADVLTEKQKRYAATDAWACIKLYEE 189
>gi|298705698|emb|CBJ28936.1| hypothetical protein Esi_0124_0050 [Ectocarpus siliculosus]
Length = 955
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 12/151 (7%)
Query: 332 IEGCK----VVGIDCEWKPNYVKGCKMNKVSIMQIA-SDEMVFIFDLIKLAEDVPDV-LD 385
I+GC+ V+G+DCEW+P+ + G N VS +Q++ D + F L + +
Sbjct: 413 IDGCQLQGNVLGLDCEWEPS-LGGTTPNPVSTVQLSLPDGTAYCFQLQRGNKKTTSSNFP 471
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE-PKGGLSGL 444
L +L++P I K+G N D L YG +E ++ + + E P L+G+
Sbjct: 472 KALQNLLENPSIAKVGVNINSDATYLERDYG-IEVANTVDLRTYARQCWVETPSRSLAGM 530
Query: 445 AEKILGAGLNKTR--RNSNWEQRPLSQNQLE 473
A +LG L K R S W PLS +Q+
Sbjct: 531 ASSLLGRQLPKDPVIRLSRWSS-PLSDDQVR 560
>gi|296221953|ref|XP_002756974.1| PREDICTED: Werner syndrome ATP-dependent helicase [Callithrix
jacchus]
Length = 1433
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 15/160 (9%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQS 394
++VG D EW P Y KG K+ KV+++Q+ S+ ++F + ++ V L +L++
Sbjct: 77 EMVGFDMEWPPVYNKG-KLGKVALIQLCVSESKCYLFHISSMS-----VFPQGLKMLLEN 130
Query: 395 PGILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDIQNVFKEPKG--GLSGLAEKILGA 451
I K G + D +L + +LE F L D+ N + K L+GL + +LG
Sbjct: 131 KAIKKAGVGIEGDQWKLLRDFDVKLENFVE---LTDVANKKLKCKETWSLNGLVKHLLGK 187
Query: 452 GL--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L +K+ R SNW + PL+++Q YAA DA I+ +
Sbjct: 188 QLLKDKSIRCSNWSKFPLTEDQKLYAATDAYAGFVIYRKL 227
>gi|242058239|ref|XP_002458265.1| hypothetical protein SORBIDRAFT_03g030200 [Sorghum bicolor]
gi|241930240|gb|EES03385.1| hypothetical protein SORBIDRAFT_03g030200 [Sorghum bicolor]
Length = 201
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 27/179 (15%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
W+DEV +H+ H VVG+D EW+P++ + +K +I+Q+ +F +++ A
Sbjct: 30 WLDEVLAVHRRRLH---KLVVGLDVEWRPSFSRA--YSKTAILQLCVGRRCLVFQILR-A 83
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLL--------- 428
VP L L G +G + D ++L YG LE ++
Sbjct: 84 GYVPIALAEFLG---DDSGYTFVGVGVEADAQRLCDDYG-LEVGHTVDLAYLAAEKMERR 139
Query: 429 DIQNVFKEPKGGLSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQI 485
D++N GL G+A ++ A + K + R W+ LS Q++YA +DA V ++
Sbjct: 140 DLRN------AGLKGIAAAVMDAHVEKPQSVRIGPWDAYDLSDEQVKYATIDAFVSFEV 192
>gi|50949608|emb|CAH10568.1| hypothetical protein [Homo sapiens]
Length = 272
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 25/217 (11%)
Query: 291 LKTRE---PEAGFVHS---------RFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVV 338
L +RE PE +HS R L K + V D+++ L ++ +E V+
Sbjct: 48 LGSRELPPPEDDQLHSSAPRSSWKERILKAKVVTVSQEAEWDQIEPLLRS--ELEDFPVL 105
Query: 339 GIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV--PDVLDSCLTRILQSPG 396
GIDCEW ++G K + +S++Q+AS + + L++L + + L L IL
Sbjct: 106 GIDCEWV--NLEG-KASPLSLLQMASPSGLCV--LVRLPKLICGGKTLPRTLLDILADGT 160
Query: 397 ILKLGYNFQCDIKQLAHSYGEL--ECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLN 454
ILK+G D +L YG + C + + +N L LAE +L L+
Sbjct: 161 ILKVGVGCSEDASKLLQDYGLVVRGCLDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLD 220
Query: 455 KTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
K+ R SNW+ L+++Q+ YAA DA + + +F H+
Sbjct: 221 KSLLLRCSNWDAETLTEDQVIYAARDAQISVALFLHL 257
>gi|226533262|ref|NP_001141102.1| uncharacterized protein LOC100273185 [Zea mays]
gi|194702630|gb|ACF85399.1| unknown [Zea mays]
gi|413950814|gb|AFW83463.1| hypothetical protein ZEAMMB73_986096 [Zea mays]
Length = 202
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 14/173 (8%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
W+ E+ LH+ + +VG+D EW+P++ G N V+ +Q+ IF L+ A
Sbjct: 30 WIAEILALHRPGSNGYSI-IVGLDVEWRPSF--GPHQNPVATLQLCVGHSCLIFQLL-YA 85
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEP 437
+ VP L L GI +G + D ++L+ +G L ++ P
Sbjct: 86 DYVP----GALAEFLGDRGIRFVGVGVEADAERLSDDHG-LVVANAEDLRGRAAERMNRP 140
Query: 438 ---KGGLSGLAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ GL L + ++G L K +R S W+ LS Q++YA +DA V ++
Sbjct: 141 DLRQAGLRALVQVVMGVNLVKPQRVTMSRWDASCLSYEQIKYACIDAFVSFEV 193
>gi|354566787|ref|ZP_08985958.1| 3'-5' exonuclease [Fischerella sp. JSC-11]
gi|353544446|gb|EHC13900.1| 3'-5' exonuclease [Fischerella sp. JSC-11]
Length = 313
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 84/180 (46%), Gaps = 18/180 (10%)
Query: 324 GLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASD---EMVFIFDLIKLAEDV 380
+ I ++ ID E K +++ + ++ +D + ++I D++ D+
Sbjct: 16 AIRSQIAEFTQRSILWIDTEVADYKSKNPRLSLIQVLDDPTDMSGDRIYILDVL----DL 71
Query: 381 PDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQN-----VFK 435
PD++ + +I+ +P I K+ +N D+K L + K+ LD+ +
Sbjct: 72 PDIVADFIAQIMINPAIEKVFHNASYDVKFLGNKKA-----KNVTCTLDMAKKIPYYILP 126
Query: 436 EPKGGLSGLAEKILG-AGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQ 494
P L LA K+ ++K + S+W QRPL++ Q+EYA LD + L Q+ + +Q
Sbjct: 127 LPNYKLKTLANKLCKFLHVDKQEQTSDWGQRPLTEEQIEYAYLDCIYLAQVHSRLIELNQ 186
>gi|218885986|ref|YP_002435307.1| 3'-5' exonuclease [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218756940|gb|ACL07839.1| 3'-5' exonuclease [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 201
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 15/169 (8%)
Query: 325 LHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVL 384
L A+ + V+G D E +P + KG K+N S++Q+A ++V++F L L
Sbjct: 38 LADAVDRLRDEDVLGFDTETRPTFRKG-KVNLPSLVQLACSDVVYLFQLNWLP------F 90
Query: 385 DSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE---PKGGL 441
L +L I+K G + DI+ L + F ++ D+ V ++ GL
Sbjct: 91 GEALATVLSDADIVKTGVAVRDDIRDLQKLF----AFNDAGVV-DLGEVARDLGLETHGL 145
Query: 442 SGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
LA L ++K + SNW R L+ Q+ YAA DA V +I +R
Sbjct: 146 RNLAANFLEVRISKGAQCSNWSNRELAPQQVLYAATDAWVSREIHLRMR 194
>gi|322696271|gb|EFY88066.1| putative Werner syndrome helicase [Metarhizium acridum CQMa 102]
Length = 551
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 15/170 (8%)
Query: 331 HIEGCKVVGIDCEWKPNYVKGC-KMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLT 389
H G V+G+D EW P + + VS++QIAS + +F + AE D++ L
Sbjct: 195 HFLGEAVLGLDLEWFPYASRSSGPRDNVSLIQIASPGRIGLFHVAMFAEGEDDLVAPTLR 254
Query: 390 RILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV----FKEPK------G 439
IL+ P + K+G + Q D +L Y +++ +E+ + V K PK
Sbjct: 255 TILEDPNVSKVGVHIQGDCTRL-KKYLDVQVRGIFELSHLYKQVKYTAAKTPKLINKVAV 313
Query: 440 GLSGLAEKILGAGLNK--TRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
LS IL L K R+SNW +R L Q+ Y+A DA +Q++H
Sbjct: 314 ALSTQVHDILKLPLFKGDVVRSSNWMKR-LYYKQVLYSASDAYAGIQLYH 362
>gi|302784546|ref|XP_002974045.1| hypothetical protein SELMODRAFT_100501 [Selaginella moellendorffii]
gi|300158377|gb|EFJ25000.1| hypothetical protein SELMODRAFT_100501 [Selaginella moellendorffii]
Length = 200
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASD-EMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
V+G D EWKP++ +G + +++Q+ D ++F + +P L ++L+
Sbjct: 42 VLGFDTEWKPSFERGAVPGRTAVLQLCLDSSRCYVFHIFH--SGIPPQLQ----KLLEEE 95
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNK 455
I K G D+ +L YG + Q + + LS LAE++ ++K
Sbjct: 96 TISKAGIGISGDVSKLKLDYGVTVTGSVDLSAMANQKLKRSQSWSLSSLAEELTCKVIDK 155
Query: 456 TR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
R +WE +PLS QL YAA DA L ++
Sbjct: 156 PTDIRCGDWELQPLSPAQLSYAATDAFASLHLYQ 189
>gi|195625840|gb|ACG34750.1| hypothetical protein [Zea mays]
Length = 202
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 14/173 (8%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
W+ E+ LH+ + +VG+D EW+P++ G N V+ +Q+ IF L+ A
Sbjct: 30 WIAEILALHRPGSNGYSI-IVGLDVEWRPSF--GPHXNPVATLQLCVGHSCLIFQLL-YA 85
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEP 437
+ VP L L GI +G + D ++L+ +G L ++ P
Sbjct: 86 DYVP----GALAEFLGDRGIRFVGVGVEADAERLSDDHG-LVVANAEDLRGRAAERMNRP 140
Query: 438 ---KGGLSGLAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ GL L + ++G L K +R S W+ LS Q++YA +DA V ++
Sbjct: 141 DLRQAGLRALVQVVMGVNLVKPQRVTMSRWDASCLSYEQIKYACIDAFVSFEV 193
>gi|403294330|ref|XP_003938145.1| PREDICTED: Werner syndrome ATP-dependent helicase [Saimiri
boliviensis boliviensis]
Length = 1430
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 17/160 (10%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG D EW P Y KG K+ KV+++Q+ S+ ++F + ++ V L +L++
Sbjct: 78 VVGFDMEWPPVYNKG-KLGKVALIQLCVSESKCYLFHISSMS-----VFPQGLKMLLENK 131
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPK----GGLSGLAEKILGA 451
I K G + D +L + K++ L D+ N K+ K L+GL + +LG
Sbjct: 132 AIKKAGVGIEGDQWKLLRDFDVK--LKNFVELTDVAN--KKLKCIETWSLNGLIKHLLGK 187
Query: 452 GL--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L +K+ R SNW + PL+++Q YAA DA I+ +
Sbjct: 188 QLLKDKSIRCSNWSKFPLTEDQKLYAATDAYAGFIIYRKL 227
>gi|154275864|ref|XP_001538777.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150413850|gb|EDN09215.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 808
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
Query: 337 VVGIDCEWKPN-YVKGCKMNKVSIMQIASDEMVFIFDL--IKLAEDVPDVLDSCLTRILQ 393
+VG+D EWK + ++ VS++Q+AS E + IF L A + +L L RIL+
Sbjct: 599 IVGLDVEWKAQASAQDSLVDNVSVIQLASKERIAIFHLALFNPANSLQHLLSPTLKRILE 658
Query: 394 SPGILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDIQNVFKEPK---GGLSGLAEKI- 448
SP I+K+G + D +L G + L + PK L LA+++
Sbjct: 659 SPDIVKVGVAIRADCTRLYKYLGIRTDNICEVSRLHKVVKHHLNPKLIDKRLVNLAQQVE 718
Query: 449 --LGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
LG L+K R W ++ L+ Q++Y A D LQ+FH
Sbjct: 719 EHLGLPLDKDPEIRCGGWSKK-LNYRQVQYVATDPYAALQLFH 760
>gi|375256792|ref|YP_005015959.1| 3'-5' exonuclease [Tannerella forsythia ATCC 43037]
gi|363407096|gb|AEW20782.1| 3'-5' exonuclease [Tannerella forsythia ATCC 43037]
Length = 198
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 88/179 (49%), Gaps = 13/179 (7%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
I+ VD + + +A+ + + VG D E +P++ K + +KV++MQ++++ + ++F L
Sbjct: 27 IVVVDRPEEVGQAVRILSASRCVGFDTETRPSFKKN-QHHKVALMQLSTENVCYLFRLNH 85
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK 435
L +P+ L + L+ I K+G + D + +L +D+Q +
Sbjct: 86 LG-GIPEPLIA----FLKDERITKIGLSLPDDFHMMRERVKDLRPAG----FIDLQKIMP 136
Query: 436 E---PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
+ L + + G ++K R +NW+ L+ Q YAALDA L+I+ ++S
Sbjct: 137 SYGIEEASLQKIYAILFGKKISKRTRLTNWDADILTDAQQNYAALDAWACLRIYQLLKS 195
>gi|152995426|ref|YP_001340261.1| 3'-5' exonuclease [Marinomonas sp. MWYL1]
gi|150836350|gb|ABR70326.1| 3'-5' exonuclease [Marinomonas sp. MWYL1]
Length = 195
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 10/171 (5%)
Query: 311 LVVEDI-IWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVF 369
L + DI I +EVD +AI +E +G D E KP + KG S++Q+A++ F
Sbjct: 18 LGLSDIHIVENEVDA-EQAIKALENETSLGFDTESKPIFQKGQVSPGPSLIQLATESKAF 76
Query: 370 IFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLD 429
+F P + + +IL +P I K+G+ + D K+L + +++ ++ +
Sbjct: 77 LF-----PTRFPSAV-AAAKQILSNPKIKKIGFGIKDDNKELRNKL-DIDICNTQDLSVT 129
Query: 430 IQNVFKEPKG-GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDA 479
++ + E G +LG L K + SNW PL ++Q+ YAA DA
Sbjct: 130 LKQLAGEKNTIGARAAVAMVLGKRLGKGAQKSNWGAYPLKEHQILYAANDA 180
>gi|354474937|ref|XP_003499686.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog
[Cricetulus griseus]
gi|344242328|gb|EGV98431.1| Werner syndrome ATP-dependent helicase-like [Cricetulus griseus]
Length = 1405
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 79/159 (49%), Gaps = 15/159 (9%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIA-SDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
V+G D EW P Y G K N+V+++Q+ S+ ++F + ++ V L +L++
Sbjct: 78 VIGFDMEWPPIYKHG-KRNRVAVIQLCMSESKCYLFHISSMS-----VFPQGLKMLLENK 131
Query: 396 GILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDIQN--VFKEPKGGLSGLAEKILGAG 452
I K G + D +L + +LE F L DI N + L+GL + ILG
Sbjct: 132 SIKKAGVGIEGDQWKLLRDFEIKLESFVE---LTDIANEKLKCAETWSLNGLVKHILGKQ 188
Query: 453 L--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L +K+ R SNW PL+ +Q YAA DA L I+ +
Sbjct: 189 LLKDKSIRCSNWSNFPLTDDQKLYAATDAYAGLAIYEKL 227
>gi|157133254|ref|XP_001656202.1| hypothetical protein AaeL_AAEL012676 [Aedes aegypti]
gi|157133256|ref|XP_001656203.1| hypothetical protein AaeL_AAEL012676 [Aedes aegypti]
gi|108870907|gb|EAT35132.1| AAEL012676-PB [Aedes aegypti]
gi|108870908|gb|EAT35133.1| AAEL012676-PA [Aedes aegypti]
Length = 257
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 331 HIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTR 390
H E V+G DCEW G KV+++Q+AS + I + +P L +
Sbjct: 39 HCEDYPVLGFDCEWWCTSSMG-NNRKVALLQLASAGGLCILVQMTRLHSIPQEL----SD 93
Query: 391 ILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILG 450
+L + ILK+G D +L YG L ++ Q + G+ LA+ +LG
Sbjct: 94 LLHNDRILKVGIGPLADGIKLHQDYG-LALRGTMDLQTLAQRLDVPVPYGMKALAKSVLG 152
Query: 451 AGLNKTRRN--SNWEQRPLSQNQLEYAALDAVVLLQIF 486
++K + SNWE+ L++ Q++YA+ DA+V L+IF
Sbjct: 153 FEMDKKKNVILSNWERPLLTKRQIDYASKDAIVGLEIF 190
>gi|319945089|ref|ZP_08019351.1| 3'-5' exonuclease [Lautropia mirabilis ATCC 51599]
gi|319741659|gb|EFV94084.1| 3'-5' exonuclease [Lautropia mirabilis ATCC 51599]
Length = 228
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 19/179 (10%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
+A I VVG D E KP +V+G + ++Q AS E ++F L A
Sbjct: 24 QQAADEIGALSVVGFDTESKPVFVRGQTQDGPHLVQFASAERAWLFPLQDPA------CA 77
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK----EPKGGL 441
+ +L P +LK+G+ D QL +G + L+D+ ++ G+
Sbjct: 78 QAVAGLLARPELLKVGFGLAGDRAQLLARFGVAP-----QGLVDLDQTYRALGYRASLGI 132
Query: 442 SGLAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDV 498
G K++ S+W ++PLS Q YAA DA +I+ + C+Q DV
Sbjct: 133 RMAMAVTFGRYFEKSKSIGTSDWSRQPLSAAQCRYAAHDAWGAFRIYEAL--CAQGIDV 189
>gi|218439906|ref|YP_002378235.1| 3'-5' exonuclease [Cyanothece sp. PCC 7424]
gi|218172634|gb|ACK71367.1| 3'-5' exonuclease [Cyanothece sp. PCC 7424]
Length = 308
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASD---EMVFIFD 372
+++ + + + I + K++ +D E K +++ + ++ D +IFD
Sbjct: 1 MLYFTQSEDIQALIDDLTEVKILWLDTESTDLNSKKSRLSLIQVLAYPEDTNGSRTYIFD 60
Query: 373 LIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGE-LECFKHYEMLLDIQ 431
++ D PD++D + +I+ + I K+ +N Q D++ L + + C +
Sbjct: 61 VL----DNPDIVDYFIEKIMVNDQINKIFHNAQHDLQFLGGKKAKNVTCTLKLSKTIPY- 115
Query: 432 NVFKEPKGGLSGLAEKILG-AGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
++ P L L E + ++K + S+W QRPLSQ QL+YA +D V L I +
Sbjct: 116 HILPVPNHTLKTLTEYLTDFKNVSKEEQTSDWSQRPLSQKQLDYAKMDPVYLAHIHGRLL 175
Query: 491 SCSQPTDVSEGHDKI 505
+Q ++ D +
Sbjct: 176 ELNQQSNPDPNQDNL 190
>gi|322704992|gb|EFY96581.1| putative Werner syndrome helicase [Metarhizium anisopliae ARSEF 23]
Length = 545
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 37/181 (20%)
Query: 331 HIEGCKVVGIDCEWKP--NYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCL 388
H G V+G D EW P + G + N VS++QIAS + +F + A+ D++ L
Sbjct: 195 HFLGEAVLGFDLEWFPYASRSSGTREN-VSLIQIASPGRIGLFHVAMFAKGEDDLVAPAL 253
Query: 389 TRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF-------------- 434
I++ P + K+G + Q D ++ + G + +Q VF
Sbjct: 254 RTIMEDPNVSKVGVHIQGDCTRMKNYLG-----------VQVQGVFELSHLYKQVKYTAT 302
Query: 435 KEPK------GGLSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
K PK LS IL L K R+SNW +R L Q+ YAA DA +Q++
Sbjct: 303 KTPKLINKVTVALSTQVHDILKLPLFKGDIVRSSNWMKR-LDYKQILYAASDAYAGIQLY 361
Query: 487 H 487
H
Sbjct: 362 H 362
>gi|428313009|ref|YP_007123986.1| ribonuclease D [Microcoleus sp. PCC 7113]
gi|428254621|gb|AFZ20580.1| ribonuclease D [Microcoleus sp. PCC 7113]
Length = 312
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 9/152 (5%)
Query: 366 EMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHS-YGELECFKHY 424
E V +FD++ + P ++ + +I+ + I K+ +N D+K L S + C +
Sbjct: 63 EQVSVFDVL----EQPSLVAEFIEQIMLNSAIEKVFHNASYDLKLLGKSKVKNVTCT--F 116
Query: 425 EMLLDIQN-VFKEPKGGLSGLAEKILG-AGLNKTRRNSNWEQRPLSQNQLEYAALDAVVL 482
EM I + P L LA+++ L+KT + S+W +RPLS NQL YA +DAV +
Sbjct: 117 EMAKKIPYYLLPVPNHKLKTLADQLCPLPPLDKTEQGSDWGRRPLSANQLYYAKMDAVYV 176
Query: 483 LQIFHHVRSCSQPTDVSEGHDKIEWKSYIVSH 514
Q+ H + +P +E + + + + H
Sbjct: 177 AQVHHQLLQIREPEPATEDIEALTMRYRQIEH 208
>gi|183219597|ref|YP_001837593.1| putative ribonuclease D [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189909736|ref|YP_001961291.1| ribonuclease III [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167774412|gb|ABZ92713.1| Ribonuclease III [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167778019|gb|ABZ96317.1| Putative ribonuclease D (RNase D) [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 406
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 11/175 (6%)
Query: 312 VVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIF 371
+ + I VD L A+ ++ K++ ID E Y KV ++QI S+ ++
Sbjct: 3 INSNYILVDTAKALDLALINLRQSKIMSIDTESSGYY---TYYPKVCLIQINSNGKNYLI 59
Query: 372 DLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQ 431
D +K+ S L + + P ILK+ ++ Q DIK L +G F + +
Sbjct: 60 DPLKITNL------SALGPLFEDPNILKIFHSAQDDIKALKRDFGF--KFVNTADTMISS 111
Query: 432 NVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
+ + LS + E L+K + SNWE RPL + QL+YAALD L I+
Sbjct: 112 RLLSLEQSSLSFVVEHYHKVTLSKVEQKSNWEIRPLQKQQLKYAALDTAYLESIW 166
>gi|350587033|ref|XP_001925126.4| PREDICTED: exonuclease 3'-5' domain-containing protein 2 [Sus
scrofa]
Length = 624
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 17/185 (9%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDE----MVFIFDLIKLAEDVPDVLDSCLTRIL 392
V+GIDCEW ++G K + +S++Q+AS +V + LI + +P L IL
Sbjct: 107 VLGIDCEWV--NLEG-KASPLSLLQMASPSGFCVLVRLPKLISGGKTLPKTL----LDIL 159
Query: 393 QSPGILKLGYNFQCDIKQLAHSYGEL--ECFKHYEMLLDIQNVFKEPKGGLSGLAEKILG 450
ILK+G D +L YG + C + + +N L LAE +L
Sbjct: 160 ADGTILKVGVGCSEDASKLLQDYGLVVKGCLDLRYLAMRHRNNLLSNGLSLKSLAETVLN 219
Query: 451 AGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV--RSCSQPTDVSEGHDKIE 506
L+K+ R SNW+ L+++Q+ YAA DA + + +F + S+ + E +D+I
Sbjct: 220 FPLDKSLLLRCSNWDAENLTEDQVIYAARDAQISVALFLRLLGYPFSRNSTPEENNDRIG 279
Query: 507 WKSYI 511
W+ +
Sbjct: 280 WRKVL 284
>gi|46124885|ref|XP_386996.1| hypothetical protein FG06820.1 [Gibberella zeae PH-1]
Length = 547
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 24/168 (14%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
KV+G D EW + VS++QIAS V +F + +D D + +I++
Sbjct: 186 KVIGFDLEWLIRHRNTDPRVNVSLIQIASPSRVALFHVALYPKD--DFVAPTFKKIMEDE 243
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSG------------ 443
+ K+G + D +L ++ G +E +L++ ++FK K SG
Sbjct: 244 SVTKVGVCIKGDCTRLKNNLG-IES----RGVLELSHLFKLVKYSKSGELKRINKIMVNL 298
Query: 444 --LAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
+++LG L K R+SNW PLS+ Q+ Y+A DA V LQ++H
Sbjct: 299 AAQTQEVLGLPLFKGNDVRSSNW-MLPLSEQQISYSASDAYVGLQLYH 345
>gi|225556093|gb|EEH04383.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 963
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 25/169 (14%)
Query: 337 VVGIDCEWKPN-YVKGCKMNKVSIMQIASDEMVFIFDL--IKLAEDVPDVLDSCLTRILQ 393
+VG+D EWK + ++ VS++Q+AS E + IF L A + +L L RIL+
Sbjct: 754 IVGLDVEWKAQASAQDSLVDNVSVIQLASKERIAIFHLALFNPANSLQHLLSPTLKRILE 813
Query: 394 SPGILKLGYNFQCDIKQLAHSYG-------EL----ECFKHY--EMLLDIQNVFKEPKGG 440
SP I+K+G + D +L G E+ + KH+ L+D + V
Sbjct: 814 SPDIVKVGVAIRADCTRLYKFLGIRTNNICEVSRLHKVVKHHLNPKLIDKRLV------N 867
Query: 441 LSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
L+ E+ LG L+K R W ++ L+ Q++Y A D LQ+FH
Sbjct: 868 LAQQVEEHLGLPLDKDPEIRCGGWSKK-LNYRQVQYVATDPYAALQLFH 915
>gi|417403409|gb|JAA48511.1| Putative exonuclease 3'-5' domain-containing protein 2 [Desmodus
rotundus]
Length = 623
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 20/234 (8%)
Query: 288 EGFLKTREPEAGFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPN 347
E L + P A + R L K + V D+++ L ++ ++ V+GIDCEW
Sbjct: 60 EDQLHSTAPRATW-EERILDAKVVTVSQEAEWDQIEPLLRS--ELQDFPVLGIDCEWV-- 114
Query: 348 YVKGCKMNKVSIMQIASDE----MVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYN 403
++G K + +S++Q+AS +V + L+ +P L S IL ILK+G
Sbjct: 115 NLEG-KASPLSLLQMASPSGFCVLVRLPKLMCGGRTLPKTLLS----ILADGTILKVGVG 169
Query: 404 FQCDIKQLAHSYGEL--ECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTR--RN 459
D +L YG + C + + +N L LAE +L L+K+ R
Sbjct: 170 CSEDASKLLQDYGLVVKGCLDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLDKSLVLRC 229
Query: 460 SNWEQRPLSQNQLEYAALDAVVLLQIFHHV--RSCSQPTDVSEGHDKIEWKSYI 511
SNW+ L+++Q+ YAA DA + + +F H+ S+ + + E +D W+ +
Sbjct: 230 SNWDAEDLTEDQVIYAARDAQISVALFLHLLGYPFSRNSTLEESNDLTGWRKVL 283
>gi|291386094|ref|XP_002709593.1| PREDICTED: Werner syndrome protein [Oryctolagus cuniculus]
Length = 1416
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 13/158 (8%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG D EW P Y KG K ++V+++Q+ S+ ++F + ++ V L +L++
Sbjct: 78 VVGFDMEWPPVYTKG-KSSRVALIQLCVSESKCYLFHISSMS-----VFPQGLKMLLENK 131
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQN--VFKEPKGGLSGLAEKILGAGL 453
I K G + D +L + K + L D+ N + L+GL + +LG L
Sbjct: 132 AIKKAGIGIEGDQWKLLRDFDIK--LKSFVELTDVANEKLKCAETWSLNGLVKHLLGKQL 189
Query: 454 --NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
+K+ R SNW PL+++Q YAA DA L I+ +
Sbjct: 190 LKDKSIRCSNWSNFPLTEDQKLYAATDAYAGLIIYRKL 227
>gi|262194484|ref|YP_003265693.1| 3'-5' exonuclease [Haliangium ochraceum DSM 14365]
gi|262077831|gb|ACY13800.1| 3'-5' exonuclease [Haliangium ochraceum DSM 14365]
Length = 925
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 37/181 (20%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
+ +VD+ L +A + G VG+D E + ++Q+A+ E + D
Sbjct: 756 VRYVDQQAALEQACAALLGEPRVGLDVE------TTLFDRALCLVQLAAPEYTVVID--- 806
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF- 434
A V D+ ++ +L S ++K+ +N Q E F+ M DI+NVF
Sbjct: 807 -ARAVDDL--GPVSELLASRAVVKIIHNAQF----------ERSVFRKLGM--DIENVFD 851
Query: 435 ------------KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVL 482
+E GL + + LG L+K + S+W RPL+Q QL+YAALDA VL
Sbjct: 852 TLKVSRRLRGRKREGGHGLGAVCARELGRELDKHEQRSDWTLRPLTQRQLDYAALDAEVL 911
Query: 483 L 483
L
Sbjct: 912 L 912
>gi|345888291|ref|ZP_08839391.1| hypothetical protein HMPREF0178_02165 [Bilophila sp. 4_1_30]
gi|345040888|gb|EGW45105.1| hypothetical protein HMPREF0178_02165 [Bilophila sp. 4_1_30]
Length = 176
Score = 58.2 bits (139), Expect = 1e-05, Method: Composition-based stats.
Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 27/181 (14%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
+++ V + +A+ ++ ++G D E +P++ KG K S++Q+A E+V LI
Sbjct: 7 EVMLVQTEGEMARALNFLKKETLLGFDTESRPSFKKG-KSYPTSLIQLAGSELVV---LI 62
Query: 375 KLAEDVPDVLDSC--LTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEM----LL 428
+L ++ C L +L PGI+K G + DI+ L K +E L
Sbjct: 63 RL-----NLTPFCGALAGLLADPGIIKAGVAIRDDIRALQ---------KLHEFTPGGLA 108
Query: 429 DIQNVFKE---PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
D+ + K+ GL LA +++G ++K + SNW ++ L+ Q+ YAA DA + +I
Sbjct: 109 DLAEMAKQRGIKAQGLRTLAAQLMGCRISKAAQCSNWAKKTLTPQQVRYAATDAWIGREI 168
Query: 486 F 486
+
Sbjct: 169 Y 169
>gi|88800842|ref|ZP_01116397.1| ribonuclease D [Reinekea blandensis MED297]
gi|88776415|gb|EAR07635.1| ribonuclease D [Reinekea sp. MED297]
Length = 380
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 79/182 (43%), Gaps = 32/182 (17%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKM-NKVSIMQIASDEMVFIFDLIKL 376
W+D L + V+ +D E +V+ + ++Q+ ++ V++ D +++
Sbjct: 7 WIDNNAALAQVADEWAAASVIALDTE----FVRTDSFYAHLGLIQVGIEDQVWLIDPLQI 62
Query: 377 AEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK- 435
+ P L R+L P I+K+ + D + LAH G +++QNVF
Sbjct: 63 NDWAP------LVRVLSDPAIVKVLHALSEDAEVLAHHLG-----------VELQNVFDT 105
Query: 436 EPKGGLSG---------LAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
+ G G L E I L K S+W QRPL+ Q YAA D + L +++
Sbjct: 106 QIAAGFLGHPVQMSYARLVEAICDVELPKEATRSDWLQRPLADEQCFYAAADVLWLYRVY 165
Query: 487 HH 488
H
Sbjct: 166 QH 167
>gi|426195548|gb|EKV45477.1| hypothetical protein AGABI2DRAFT_186278 [Agaricus bisporus var.
bisporus H97]
Length = 870
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 79/177 (44%), Gaps = 14/177 (7%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
W+ DGL + + + +D E ++ + + +MQI++ E F+ D+I L
Sbjct: 264 WISNPDGLQNMLTKLRAASEIAVDLE---HHSYRTYLGFLCLMQISTREEDFVVDVIALR 320
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYG--ELECFKHYEMLLDIQNVFK 435
+++ L + P I+K+ + + DI L + + F Y + +
Sbjct: 321 DEM-----EVLNEVFTDPKIVKVFHGAESDIVWLQQDFNLYVVNLFDTYHA----SKLLE 371
Query: 436 EPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSC 492
P+ GL+ L E +K + ++W RPL + LEYA D LL I+ ++R+
Sbjct: 372 FPRHGLANLLEMYCDYIPDKRYQLADWRIRPLPKEMLEYARSDTHFLLFIYDNLRNA 428
>gi|157133258|ref|XP_001656204.1| hypothetical protein AaeL_AAEL012676 [Aedes aegypti]
gi|108870909|gb|EAT35134.1| AAEL012676-PC [Aedes aegypti]
Length = 200
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 331 HIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTR 390
H E V+G DCEW G KV+++Q+AS + I + +P L +
Sbjct: 39 HCEDYPVLGFDCEWWCTSSMG-NNRKVALLQLASAGGLCILVQMTRLHSIPQEL----SD 93
Query: 391 ILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILG 450
+L + ILK+G D +L YG L ++ Q + G+ LA+ +LG
Sbjct: 94 LLHNDRILKVGIGPLADGIKLHQDYG-LALRGTMDLQTLAQRLDVPVPYGMKALAKSVLG 152
Query: 451 AGLNKTRRN--SNWEQRPLSQNQLEYAALDAVVLLQIFH 487
++K + SNWE+ L++ Q++YA+ DA+V L+IF
Sbjct: 153 FEMDKKKNVILSNWERPLLTKRQIDYASKDAIVGLEIFR 191
>gi|406962736|gb|EKD89001.1| hypothetical protein ACD_34C00239G0001 [uncultured bacterium]
Length = 380
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 11/175 (6%)
Query: 317 IWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKL 376
+WV+ GL +A +E + +D E + KV ++QI+S E F+FD +
Sbjct: 10 VWVNSSQGLTEAFQALESQSRIAVDTESNSLF---SYQEKVCLIQISSPETDFVFDPFEF 66
Query: 377 AEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE 436
++ S L + Q+P K+ + + D+ L Y + ++ ++ +
Sbjct: 67 SDL------SLLGSLFQNPKQEKIFHASEYDLICLKRDY-HFKFINIFDTMI-ASRILGA 118
Query: 437 PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
P+ GL L + L+K + +NW RPL L+YA LD L ++ + S
Sbjct: 119 PQVGLGSLLQNYFDINLDKKYQRANWGLRPLPPEMLDYARLDTYYLFKLRDRLES 173
>gi|289740869|gb|ADD19182.1| putative 3'-5' exonuclease [Glossina morsitans morsitans]
Length = 568
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 15/177 (8%)
Query: 316 IIWVDEVDGLHKAI----CHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIF 371
++ + ++ K + H KV+G DCEW V G + V+++Q+ S+
Sbjct: 54 VVLIQNINDCQKVVNILKSHCSDYKVLGFDCEWV--TVSGSR-RPVALLQLCSNRGYCAL 110
Query: 372 DLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQ 431
+ +P L +L ++K+G + D ++LA YG + +++
Sbjct: 111 FRLCCIRQIPKSLRD----LLADEEVIKVGVDPGYDAQKLAQDYG-VGVASTFDLRYLAT 165
Query: 432 NVFKEPKGGLSGLAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIF 486
V ++P+G L+ L+ +L L+K R SNWE + L++ Q+EYAA DA V ++IF
Sbjct: 166 MVGRKPEG-LAKLSLSVLKVTLDKHWRLSCSNWEAKDLTEKQIEYAANDAFVAVEIF 221
>gi|145550275|ref|XP_001460816.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428647|emb|CAK93419.1| unnamed protein product [Paramecium tetraurelia]
Length = 720
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 294 REPEAGFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCK 353
+E +GF+ ++ E + I ++D V+ L I ++ G D E+ +Y
Sbjct: 312 QEDPSGFIQFSDFNIHE---DQIQFIDSVEKLLLIKDLILNAQITGFDTEF-CHYFDEFA 367
Query: 354 MNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAH 413
+ V+IMQI+++ V+I D+ L E + L L S I K+G++ D +A
Sbjct: 368 IGGVAIMQISTENNVYIIDIFNLREKLE--LLQFLNNYFASNKI-KIGHSVWNDFTVMAQ 424
Query: 414 SYG---ELECFKHYEMLLDIQNVFKEPKGG--LSGLAEKILGAGLNKTRRNSNWEQRPLS 468
+ +E ++ VF E K L+ ++ G L+K SNW++RPL
Sbjct: 425 NMNLDQTVEPKNIVDLTFLYNEVFPENKNNVSLANQVYQLFGKKLSKKECFSNWQRRPLR 484
Query: 469 QNQLEYAALDAVVLLQIFHHVRSCSQ 494
+ QL Y A+DA + + ++ + Q
Sbjct: 485 KCQLHYGAMDAYICIALYLKLNQLKQ 510
>gi|409075144|gb|EKM75528.1| hypothetical protein AGABI1DRAFT_79866 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 882
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 79/177 (44%), Gaps = 14/177 (7%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
W+ DGL + + + +D E ++ + + +MQI++ E F+ D+I L
Sbjct: 244 WISTPDGLQNMLTKLRAASEIAVDLE---HHSYRTYLGFLCLMQISTREEDFVVDVIALR 300
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYG--ELECFKHYEMLLDIQNVFK 435
+++ L + P I+K+ + + DI L + + F Y + +
Sbjct: 301 DEM-----EVLNEVFTDPKIVKVFHGAESDIVWLQQDFNLYVVNLFDTYHA----SKLLE 351
Query: 436 EPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSC 492
P+ GL+ L E +K + ++W RPL + LEYA D LL I+ ++R+
Sbjct: 352 FPRHGLANLLEMYCDYIPDKRYQLADWRIRPLPKEMLEYARSDTHFLLFIYDNLRNA 408
>gi|398888278|ref|ZP_10642709.1| ribonuclease D [Pseudomonas sp. GM55]
gi|398191107|gb|EJM78308.1| ribonuclease D [Pseudomonas sp. GM55]
Length = 377
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++Q+ E ++ D
Sbjct: 4 DIHWIRDNDSLGRLCAEWQQLPFVALDTE----FMRVDTFYPIAGLLQVGDGERAYLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + P L +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LTIDNWQP------LAALLENPAVVKVVHACSEDLEVLLRLTGSLPA-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++LG L K S+W QRPLS+ Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLGIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAEVFVKLRP 170
>gi|320168640|gb|EFW45539.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 385
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 335 CKVVGIDCEWKPNYVKGCKMNKVSIMQIASDE-MVFIFDLIKLAEDVPDVLDSCLTRILQ 393
+G D EW +++G K +++Q+A + ++F LI++ + +P L +L
Sbjct: 206 APALGFDIEWFAPFIRGQKARPTALLQLAVENGPCYLFHLIQM-QGIP----PALQELLA 260
Query: 394 SPGILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAG 452
I K+G + D+ +L Y ++ E L ++ V + L L +K L
Sbjct: 261 DSRIAKVGVGIKNDVTRLVRDYSLKVNGAVDLEELAAVRVVPLRTRWSLQALVQKTLNCL 320
Query: 453 LNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
L+K+ R NWE+ PLS EYAA DA LQ +
Sbjct: 321 LDKSSELRLGNWEEAPLSWEMQEYAANDAHASLQTY 356
>gi|121605515|ref|YP_982844.1| 3'-5' exonuclease [Polaromonas naphthalenivorans CJ2]
gi|120594484|gb|ABM37923.1| 3'-5' exonuclease [Polaromonas naphthalenivorans CJ2]
Length = 198
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 19/168 (11%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
+A+ ++G +G D E KP + K I+Q+++ E +IF L ED
Sbjct: 38 RALEELDGVTALGFDTESKPTFAKNEASTGPHIVQLSTLEQAYIFQL----EDAE--CRR 91
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKG-----GL 441
+ +L++ ++K G+ D +++ H G + +LD+ VF+E +G G+
Sbjct: 92 AVAVLLETHRVIKAGFGLGDDRRRIIHKLG-----VDPQGVLDLNTVFRE-RGYRKDMGV 145
Query: 442 SGLAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
G + K+R+ SNW L ++QL YAA DA L+++
Sbjct: 146 RGAVAVMFNRRFIKSRKATTSNWANVHLQESQLIYAANDAYAALRVYQ 193
>gi|74216614|dbj|BAE37741.1| unnamed protein product [Mus musculus]
Length = 650
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 20/204 (9%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDE----MVFIFDLIKLAEDVPDVLDSC 387
+E V+GIDCEW ++G K + +S++Q+AS +V + LI +P
Sbjct: 128 LEDFPVLGIDCEWV--NLEG-KASPLSLLQMASPSGFCALVRLPRLIYGGRTLP----RT 180
Query: 388 LTRILQSPGILKLGYNFQCDIKQLAHSYGEL--ECFKHYEMLLDIQNVFKEPKGGLSGLA 445
L IL ILK+G D +L YG + C + + N L LA
Sbjct: 181 LLDILADGAILKVGVGCSEDANKLLQDYGLIVRGCLDLRYLAMKQGNNILCNGLSLKSLA 240
Query: 446 EKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV--RSCSQPTDVSEG 501
E IL L+K+ R +NW+ L+++Q+ YAA DA + + +F H+ S+ + E
Sbjct: 241 ETILNFPLDKSLLLRCNNWDAENLTEDQVTYAARDAQISVALFLHLLGYPFSRDSYEEES 300
Query: 502 HDKIEWKSYI---VSHMDNPKKSK 522
D+I W+ + + +D P +SK
Sbjct: 301 TDQINWQKALERCRNMVDIPFRSK 324
>gi|397507299|ref|XP_003824138.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 1
[Pan paniscus]
gi|397507301|ref|XP_003824139.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 2
[Pan paniscus]
gi|397507303|ref|XP_003824140.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 3
[Pan paniscus]
gi|397507305|ref|XP_003824141.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 4
[Pan paniscus]
Length = 621
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 25/217 (11%)
Query: 291 LKTRE---PEAGFVHS---------RFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVV 338
L +RE PE +HS R L K + V D+++ L ++ +E V+
Sbjct: 48 LGSRELPPPEDDQLHSSAPRSSWEERILKAKVVTVSQEAEWDQIEPLLRS--ELEDFPVL 105
Query: 339 GIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV--PDVLDSCLTRILQSPG 396
GIDCEW ++G K + +S++Q+AS + + L++L + + L L IL
Sbjct: 106 GIDCEWV--NLEG-KASPLSLLQMASPSGLCV--LVRLPKLICGGKTLPRTLLDILADGT 160
Query: 397 ILKLGYNFQCDIKQLAHSYGEL--ECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLN 454
ILK+G D +L YG + C + + +N L LAE +L L+
Sbjct: 161 ILKVGVGCSEDASKLLQDYGLIVRGCLDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLD 220
Query: 455 KTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
K+ R SNW+ L+++Q+ YAA DA + + +F H+
Sbjct: 221 KSLLLRCSNWDAETLTEDQVIYAARDAQISVALFLHL 257
>gi|119482642|ref|XP_001261349.1| 3'-5' exonuclease/helicase (Wrn), putative [Neosartorya fischeri
NRRL 181]
gi|119409504|gb|EAW19452.1| 3'-5' exonuclease/helicase (Wrn), putative [Neosartorya fischeri
NRRL 181]
Length = 383
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 36/229 (15%)
Query: 337 VVGIDCEWKPNYVKGCKM-NKVSIMQIASDEMVFIFD--LIKLAEDVPDVLDSCLTRILQ 393
V+G D EWKP + + N VS++QIA+ E + +F L K A D + L +IL+
Sbjct: 153 VIGFDMEWKPQSSRSASIQNNVSLIQIANAERIALFQIALFKPARTPEDFISPSLRKILE 212
Query: 394 SPGILKLGYNFQCD--------------IKQLAHSYGELECFKHYEMLLDIQNVFKEPKG 439
SP I K G + D I +L+H Y ++ + L++ + V
Sbjct: 213 SPKITKAGVAIKADCTRLKNFLGINVRGIFELSHLYKLVKYCQSDPALINRRPV------ 266
Query: 440 GLSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV---RSCSQ 494
LS E+ G L K R +W L+ Q++YAA D+ L +F+ + R
Sbjct: 267 NLSEQVEEHFGLPLAKDDDVRCGDWSTA-LNYRQVQYAANDSYACLCLFNTMDAKRRALT 325
Query: 495 PTDVSEGHDKIEWKSYIVSHMDNPKKSKK-------RPTIKKETESGAN 536
P H +++ +V +D + K +P + ETE A+
Sbjct: 326 PMPPLPAHAELDQPIRLVEELDVGTTNNKPVEPQVIKPAVCLETEDDAS 374
>gi|73963367|ref|XP_547872.2| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 1
[Canis lupus familiaris]
Length = 623
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 117/254 (46%), Gaps = 19/254 (7%)
Query: 288 EGFLKTREPEAGFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPN 347
E L+ P A + R L K + V D+++ L ++ +E V+GIDCEW
Sbjct: 60 EDQLRPSAPRASW-EERILGAKVVTVSQEAEWDQIEPLLRS--ELEDFPVLGIDCEW--- 113
Query: 348 YVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV--PDVLDSCLTRILQSPGILKLGYNFQ 405
+ + +S++Q+AS + L++L + + L L IL ILK+G
Sbjct: 114 VNSEGRASPLSLLQMASPSGFCV--LVRLPKLICGGKTLPKTLLDILADGTILKVGVGCS 171
Query: 406 CDIKQLAHSYGEL--ECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTR--RNSN 461
D +L YG + C + + +N L LAE +L L+K+ R SN
Sbjct: 172 EDASKLLQDYGLVVKGCLDLRYLAVRQRNNLLCNGLSLKSLAETVLNFPLDKSLLLRCSN 231
Query: 462 WEQRPLSQNQLEYAALDAVVLLQIFHHV--RSCSQPTDVSEGHDKIEWKSYI---VSHMD 516
W+ L+++Q+ YAA DA + + +F H+ S+ + + +D I W+ + +D
Sbjct: 232 WDAENLTEDQVIYAARDAQISVALFLHLLGYPFSRNSTLDGYNDHIGWRKVLEKCQDMVD 291
Query: 517 NPKKSKKRPTIKKE 530
P +SK +++E
Sbjct: 292 IPFRSKGISRLREE 305
>gi|386782259|ref|NP_001247993.1| exonuclease 3'-5' domain-containing protein 2 [Macaca mulatta]
gi|380814300|gb|AFE79024.1| exonuclease 3'-5' domain-containing protein 2 isoform 1 [Macaca
mulatta]
gi|384947988|gb|AFI37599.1| exonuclease 3'-5' domain-containing protein 2 isoform 1 [Macaca
mulatta]
Length = 620
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 94/184 (51%), Gaps = 14/184 (7%)
Query: 312 VVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIF 371
V ++ W D+++ L ++ +E V+GIDCEW ++G K + +S++Q+AS + +
Sbjct: 82 VSQEAEW-DQIEPLLRS--ELEDFPVLGIDCEWV--NLEG-KASPLSLLQMASPSGLCV- 134
Query: 372 DLIKLAEDV--PDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGEL--ECFKHYEML 427
LI+L + + L L IL ILK+G D +L YG + C +
Sbjct: 135 -LIRLPKLICGGKTLPRTLLNILADGTILKVGVGCSEDASKLLQDYGLVVRGCLDLRYLA 193
Query: 428 LDIQNVFKEPKGGLSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ +N L LAE +L L+K+ R SNW+ L+++Q+ YAA DA + + +
Sbjct: 194 MRQRNNLLCNGLSLKSLAETVLNFPLDKSLLLRCSNWDAETLTEDQVIYAARDAQISVAL 253
Query: 486 FHHV 489
F H+
Sbjct: 254 FLHL 257
>gi|353241035|emb|CCA72874.1| hypothetical protein PIIN_06810 [Piriformospora indica DSM 11827]
Length = 525
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRI 391
+ G KVVG D EWKP + + N+VS++QIASD+ V + L D + + +
Sbjct: 150 VNGVKVVGFDLEWKPMH-NAQQYNRVSLVQIASDDEVLLIQL-----DGSTKFPAAVKTL 203
Query: 392 LQSPGILKLGYNFQCDIKQLAHSYG-ELECF 421
L+SP ILK+G + D+ +L + ++ C+
Sbjct: 204 LESPHILKVGAGIEGDVAKLKKDWDVDIRCY 234
>gi|212532415|ref|XP_002146364.1| 3'-5' exonuclease/helicase (Wrn), putative [Talaromyces marneffei
ATCC 18224]
gi|210071728|gb|EEA25817.1| 3'-5' exonuclease/helicase (Wrn), putative [Talaromyces marneffei
ATCC 18224]
Length = 973
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 87/177 (49%), Gaps = 21/177 (11%)
Query: 327 KAICHIEGCKVVGIDCEWKP--NYVKGCKMNKVSIMQIASDEMVFIFDLIKL-AEDVPDV 383
+A K++G D EWKP G K N VS++QIA++E + +F + ++ D+
Sbjct: 727 RAAALFSDSKLLGFDIEWKPQAQTTSGIKSN-VSLIQIANEERIALFHIALFKGNEIHDL 785
Query: 384 LDSCLTRILQSPGILKLGYNFQCDIKQLAH-----SYGELECFKHYEMLLDIQNVFKEPK 438
+ L +L+S +K+G + + D ++ + G+ E Y++ ++ +PK
Sbjct: 786 VPPSLKLLLESTDTVKVGVSIKADCSRIRRHLDIDTRGQFELSHLYKL---VKYGSTQPK 842
Query: 439 G------GLSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
L+ E++LG L K R S+W +PL Q++YAA DA + +++
Sbjct: 843 SVNRRAVNLAQQVEELLGLPLRKDSDVRKSDW-TKPLDYAQVQYAASDAYACICLYN 898
>gi|443312267|ref|ZP_21041886.1| ribonuclease D [Synechocystis sp. PCC 7509]
gi|442777737|gb|ELR88011.1| ribonuclease D [Synechocystis sp. PCC 7509]
Length = 307
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 80/158 (50%), Gaps = 18/158 (11%)
Query: 356 KVSIMQIASD------EMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIK 409
K+S++Q+ S E V I D++ D P + D + +I+ +P I K+ +N + D+K
Sbjct: 38 KLSLIQVLSSYSANLTENVAILDVL----DDPKITDIFVQKIMLNPEIEKVFHNAKYDLK 93
Query: 410 QLAHSYGE-LECFKHYEMLLDIQN-VFKEPKGGLSGLAEKILG-AGLNKTRRNSNWEQRP 466
L + E + C EM DI + P L LAE + ++K+++ S+W +RP
Sbjct: 94 FLGKTKAENVTC--TLEMAKDIPYYLLPLPDLTLKTLAESLCDIVAVDKSQQASDWGKRP 151
Query: 467 LSQNQLEYAALDAVVLLQIFH---HVRSCSQPTDVSEG 501
L+ QL YA LD V L + H++S + P +E
Sbjct: 152 LTATQLTYANLDPVYLYMVHQKLLHLKSVTNPNPNNEN 189
>gi|402876535|ref|XP_003902017.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 1
[Papio anubis]
gi|402876537|ref|XP_003902018.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 2
[Papio anubis]
gi|402876539|ref|XP_003902019.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 3
[Papio anubis]
gi|402876543|ref|XP_003902021.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 5
[Papio anubis]
Length = 620
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 94/184 (51%), Gaps = 14/184 (7%)
Query: 312 VVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIF 371
V ++ W D+++ L ++ +E V+GIDCEW ++G K + +S++Q+AS + +
Sbjct: 82 VSQEAEW-DQIEPLLRS--ELEDFPVLGIDCEWV--NLEG-KASPLSLLQMASPSGLCV- 134
Query: 372 DLIKLAEDV--PDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGEL--ECFKHYEML 427
LI+L + + L L IL ILK+G D +L YG + C +
Sbjct: 135 -LIRLPKLICGGKTLPRTLLNILADGTILKVGVGCSEDASKLLQDYGLVVRGCLDLRYLA 193
Query: 428 LDIQNVFKEPKGGLSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ +N L LAE +L L+K+ R SNW+ L+++Q+ YAA DA + + +
Sbjct: 194 MRQRNNLLCNGLSLKSLAETVLNFPLDKSLLLRCSNWDAETLTEDQVIYAARDAQISVAL 253
Query: 486 FHHV 489
F H+
Sbjct: 254 FLHL 257
>gi|255085362|ref|XP_002505112.1| predicted protein [Micromonas sp. RCC299]
gi|226520381|gb|ACO66370.1| predicted protein [Micromonas sp. RCC299]
Length = 514
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 92/194 (47%), Gaps = 31/194 (15%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDE-----MVFIFDLIKLAEDVPD---VLDSC 387
++VG+D E +P+ VKG + V+++Q+ + + + ++ + L+ P+ V S
Sbjct: 106 RLVGLDVEARPSRVKGV-THPVALVQVTTPDNRGCLLAHVYGAMGLSPPTPNRPYVPGSA 164
Query: 388 LT-------RILQSPGILKLGYNFQCDIKQLAHSYGELE------------CFKH-YEML 427
+T R+L P +L +G D++Q+A + E+ C + + L
Sbjct: 165 VTKFPPLLARLLHDPNVLPVGQGVAEDLRQIARCFPEVTNPGVPKGGAEPGCRRGAFVDL 224
Query: 428 LDIQNVFKEPKGGLSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQI 485
I + + P GL LA+ + ++K + + S+W + PL+ Q+ YAA DA + L +
Sbjct: 225 ASIVDFYDVPASGLGRLAQHCGFSDVSKPKSVQVSDWSRTPLTDAQVRYAAQDACLSLWV 284
Query: 486 FHHVRSCSQPTDVS 499
+ + P V+
Sbjct: 285 LERLFAIYAPPGVN 298
>gi|115456978|ref|NP_001052089.1| Os04g0129200 [Oryza sativa Japonica Group]
gi|38346519|emb|CAE03814.2| OSJNBa0027H09.14 [Oryza sativa Japonica Group]
gi|113563660|dbj|BAF14003.1| Os04g0129200 [Oryza sativa Japonica Group]
gi|116317897|emb|CAH65924.1| OSIGBa0131J24.2 [Oryza sativa Indica Group]
Length = 298
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 25/177 (14%)
Query: 329 ICHIEGCKV-----VGIDCEWKPNYVKGCKMNKVSIMQIASDEM-VFIFDLIKLAEDVPD 382
+C IE K +G D EW+P +G KV++MQ+ + ++ +I VP
Sbjct: 117 LCKIETMKASGQVSLGFDLEWRPFPRRGDPPCKVAVMQLCMERTRCYVMHIIH--SGVPP 174
Query: 383 VLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV------FKE 436
VL S +L+ +K+G D +++ + Y H + L+D+ N+ F
Sbjct: 175 VLKS----LLEDSSSVKVGICIDNDARKMFNDYD-----VHVQPLMDLSNLANAKLGFPP 225
Query: 437 PKGGLSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
+ L+ L E + L K R NWE LS+ QL+YAA DA + ++ ++S
Sbjct: 226 KRWSLASLTEMVTCRELPKPSNIRMGNWEAYVLSKQQLQYAATDAYISWHLYEVLQS 282
>gi|356566626|ref|XP_003551531.1| PREDICTED: Werner Syndrome-like exonuclease-like [Glycine max]
Length = 213
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 20/159 (12%)
Query: 333 EGCKVVGIDCEWKPNYVKGCKM-NKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRI 391
+ K+VG+D EW+PN + N V+ +Q+ D IF ++ A VP LT
Sbjct: 54 DNLKIVGLDVEWRPNTQSNSQQPNPVATLQLCIDHNCLIFQILH-ATLVP----RALTSF 108
Query: 392 LQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQN-------VFKEPKGGLSGL 444
L + + +G + D ++L Y H +D+++ VF GL+ L
Sbjct: 109 LANRHVKFVGVGVRDDAQKLLRDYN-----LHVANAVDLRSLAEQKLKVFWLGSAGLAAL 163
Query: 445 AEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVV 481
LG +NK S W+ R L+ Q++YA +DA V
Sbjct: 164 GRFFLGVDINKPHHITTSLWDNRFLTHEQVQYATIDAFV 202
>gi|426377284|ref|XP_004055398.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 1
[Gorilla gorilla gorilla]
gi|426377286|ref|XP_004055399.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 2
[Gorilla gorilla gorilla]
gi|426377288|ref|XP_004055400.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 3
[Gorilla gorilla gorilla]
gi|426377290|ref|XP_004055401.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 4
[Gorilla gorilla gorilla]
Length = 621
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 25/217 (11%)
Query: 291 LKTRE---PEAGFVHS---------RFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVV 338
L +RE PE +HS R L K + V D+++ L ++ +E V+
Sbjct: 48 LGSRELPPPEDDQLHSSAPRSSWEERILKAKVVTVSQEAEWDQIEPLLRS--ELEDFPVL 105
Query: 339 GIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV--PDVLDSCLTRILQSPG 396
GIDCEW ++G K + +S++Q+AS + + L++L + + L L IL
Sbjct: 106 GIDCEWV--NLEG-KASPLSLLQMASPSGLCV--LVRLPKLICGGKTLPRTLLDILADGT 160
Query: 397 ILKLGYNFQCDIKQLAHSYGEL--ECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLN 454
ILK+G D +L YG + C + + +N L LAE +L L+
Sbjct: 161 ILKVGVGCSEDASKLLQDYGLVVRGCLDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLD 220
Query: 455 KTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
K+ R SNW+ L+++Q+ YAA DA + + +F H+
Sbjct: 221 KSLLLRCSNWDAETLTEDQVIYAARDAQISVALFLHL 257
>gi|298373694|ref|ZP_06983683.1| 3'-5' exonuclease domain protein [Bacteroidetes oral taxon 274 str.
F0058]
gi|298274746|gb|EFI16298.1| 3'-5' exonuclease domain protein [Bacteroidetes oral taxon 274 str.
F0058]
Length = 194
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 86/173 (49%), Gaps = 19/173 (10%)
Query: 319 VDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAE 378
+D + + A+ + +VVG D E KP++ G K NK+++MQI++ + F+F L + +
Sbjct: 27 IDSANEVATAVDCLMQEEVVGFDTETKPSFTHG-KSNKIALMQISTAKKCFLFRLQMIGK 85
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHY--EMLLDIQNVFKE 436
L L++ I K+G D++ L + + + +D+Q + +
Sbjct: 86 S------EALKNFLENEKIKKIGLALHGDLRNL-------RVWDKFTPKNFIDLQKIVIQ 132
Query: 437 ---PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
+ GL + I G ++K+++ SNWE + L+Q Q YAA DA +I+
Sbjct: 133 YGIEELGLQRIYAIIFGKKISKSQQLSNWEAKILNQAQQIYAATDAWACREIY 185
>gi|149737203|ref|XP_001500310.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 1
[Equus caballus]
Length = 625
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 16/229 (6%)
Query: 291 LKTREPEAGFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVK 350
L+ P A + + L K + V D+++ L ++ +E V+GIDCEW ++
Sbjct: 65 LRPSAPRASW-EEKILEAKVVTVSHGAEWDQIEPLLRS--ELEDFPVLGIDCEWV--NLE 119
Query: 351 GCKMNKVSIMQIASDEMVFIFDLIKLAEDV--PDVLDSCLTRILQSPGILKLGYNFQCDI 408
G K + +S++Q+AS + L++L + V L L IL ILK+G D
Sbjct: 120 G-KASPLSLLQMASPSGFCV--LVRLPKLVCGGKTLPKTLLDILADDTILKVGVGCSEDA 176
Query: 409 KQLAHSYGEL--ECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTR--RNSNWEQ 464
+L YG + C + + +N L LAE +L L+K+ R SNW+
Sbjct: 177 SKLLQDYGLVVKGCLDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLDKSLLLRCSNWDA 236
Query: 465 RPLSQNQLEYAALDAVVLLQIFHHV--RSCSQPTDVSEGHDKIEWKSYI 511
L+++Q+ YAA DA + + +F H+ S+ + E D W+ +
Sbjct: 237 ENLTEDQVIYAARDAQISVALFLHLLGYPFSRNSTPEENSDCTGWRKVL 285
>gi|85860425|ref|YP_462627.1| ribonuclease D [Syntrophus aciditrophicus SB]
gi|85723516|gb|ABC78459.1| ribonuclease D [Syntrophus aciditrophicus SB]
Length = 339
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 85/193 (44%), Gaps = 35/193 (18%)
Query: 310 ELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKP-NYVKGCKMNKVSIMQIASDEMV 368
+++ +WVD + +A ++ ++ +D E+ +Y + K+ ++Q+ + +
Sbjct: 50 DVIENSWMWVDSEAKVEEAREDLDSSSLISLDTEYDSMHYFR----EKLCLVQVRASKRT 105
Query: 369 FIFDLIKLAEDVPDVLDSCLTR-ILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEML 427
++FD + +D R P +LK+ + DI+ L YG
Sbjct: 106 YVFDPF-------NGIDLQFLRPYFADPRLLKVTHAGDNDIRILKRDYG----------- 147
Query: 428 LDIQNVFKEPKGG---------LSGLAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAA 476
+ +N+F + LS + E+ LG + KT++ S WE RPLS+ QL YA
Sbjct: 148 FEFRNIFDTHRAAHMLGSQYLALSSIIEQYLGVEIEKTKKMQRSKWEARPLSEGQLRYAV 207
Query: 477 LDAVVLLQIFHHV 489
D L ++ H+
Sbjct: 208 QDTAYLADLYRHL 220
>gi|190689663|gb|ACE86606.1| exonuclease 3'-5' domain-like 2 protein [synthetic construct]
gi|190691025|gb|ACE87287.1| exonuclease 3'-5' domain-like 2 protein [synthetic construct]
Length = 621
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 25/217 (11%)
Query: 291 LKTRE---PEAGFVHS---------RFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVV 338
L +RE PE +HS R L K + V D+++ L ++ +E V+
Sbjct: 48 LGSRELPPPEDDQLHSSAPRSSWKERILKAKVVTVSQEAEWDQIEPLLRS--ELEDFPVL 105
Query: 339 GIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV--PDVLDSCLTRILQSPG 396
GIDCEW ++G K + +S++Q+AS + + L++L + + L L IL
Sbjct: 106 GIDCEWV--NLEG-KASPLSLLQMASPSGLCV--LVRLPKLICGGKTLPRTLLDILADGT 160
Query: 397 ILKLGYNFQCDIKQLAHSYGEL--ECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLN 454
ILK+G D +L YG + C + + +N L LAE +L L+
Sbjct: 161 ILKVGVGCSEDASKLLQDYGLVVRGCLDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLD 220
Query: 455 KTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
K+ R SNW+ L+++Q+ YAA DA + + +F H+
Sbjct: 221 KSLLLRCSNWDAETLTEDQVIYAARDAQISVALFLHL 257
>gi|114653639|ref|XP_510030.2| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 8
[Pan troglodytes]
gi|332842572|ref|XP_001141128.2| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 2
[Pan troglodytes]
gi|332842574|ref|XP_003314457.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 [Pan
troglodytes]
gi|410224142|gb|JAA09290.1| exonuclease 3'-5' domain containing 2 [Pan troglodytes]
gi|410301904|gb|JAA29552.1| exonuclease 3'-5' domain containing 2 [Pan troglodytes]
gi|410353307|gb|JAA43257.1| exonuclease 3'-5' domain containing 2 [Pan troglodytes]
Length = 621
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 25/217 (11%)
Query: 291 LKTRE---PEAGFVHS---------RFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVV 338
L +RE PE +HS R L K + V D+++ L ++ +E V+
Sbjct: 48 LGSRELPPPEDDQLHSSAPRSSWEERILKAKVVTVSQEAEWDQIEPLLRS--ELEDFPVL 105
Query: 339 GIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV--PDVLDSCLTRILQSPG 396
GIDCEW ++G K + +S++Q+AS + + L++L + + L L IL
Sbjct: 106 GIDCEWV--NLEG-KASPLSLLQMASPSGLCV--LVRLPKLICGGKTLPRTLLDILADGT 160
Query: 397 ILKLGYNFQCDIKQLAHSYGEL--ECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLN 454
ILK+G D +L YG + C + + +N L LAE +L L+
Sbjct: 161 ILKVGVGCSEDASKLLQDYGLVVRGCLDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLD 220
Query: 455 KTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
K+ R SNW+ L+++Q+ YAA DA + + +F H+
Sbjct: 221 KSLLLRCSNWDAETLTEDQVIYAARDAQISVALFLHL 257
>gi|407939760|ref|YP_006855401.1| 3'-5' exonuclease [Acidovorax sp. KKS102]
gi|407897554|gb|AFU46763.1| 3'-5' exonuclease [Acidovorax sp. KKS102]
Length = 222
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 25/166 (15%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRI 391
+ G G D E KP +V+G + I+Q+A+ E ++F L + C R+
Sbjct: 66 LAGASAWGFDTESKPTFVQGEASDGPHIVQLATLERAWVFQLHE---------PGCRARV 116
Query: 392 ---LQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKG-----GLSG 443
L G+ K G+ D K++ H G +L++ VF++ +G G+ G
Sbjct: 117 AELLALRGVTKAGFGLGDDTKRIQHKLGV-----QPADVLELNTVFRQ-RGYRKDMGVKG 170
Query: 444 LAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
+ K+++ SNW LS+ QL YAA DA L++F+
Sbjct: 171 AVAVLFNRRFIKSKKAATSNWANARLSEAQLVYAANDAWAALRVFN 216
>gi|357130647|ref|XP_003566959.1| PREDICTED: Werner Syndrome-like exonuclease-like [Brachypodium
distachyon]
Length = 194
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 20/175 (11%)
Query: 313 VEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFD 372
VED W+ E+ + + H +VG+D EW+P+Y + N+V+++Q+ IF
Sbjct: 28 VED--WIQEIYSSYHRLLHK---LIVGLDVEWRPSYSR--VQNRVALLQLCVGRHCLIFQ 80
Query: 373 LIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQN 432
L+ A+ +P+ L+ L P + Q D +L+ + +++ ++ +
Sbjct: 81 LLH-ADYIPEALEE----FLDDPDFRFVDVGVQDDADRLSQDH-DVDVANTEDLRQLAAD 134
Query: 433 VFKEPKGGLSGLAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQI 485
F P L + ++GA L K R W+ LSQ Q+EYA +DA V +I
Sbjct: 135 GFHMP-----ALRQSVMGANLQKPHRVRMGPWDASCLSQEQIEYACIDAFVSFEI 184
>gi|194380670|dbj|BAG58488.1| unnamed protein product [Homo sapiens]
Length = 621
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 25/217 (11%)
Query: 291 LKTRE---PEAGFVHS---------RFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVV 338
L +RE PE +HS R L K + V D+++ L ++ +E V+
Sbjct: 48 LGSRELPPPEDDQLHSSAPRSSWKERILKAKVVTVSQEAEWDQIEPLLRS--ELEDFPVL 105
Query: 339 GIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV--PDVLDSCLTRILQSPG 396
GIDCEW ++G K + +S++Q+AS + + L++L + + L L IL
Sbjct: 106 GIDCEWV--NLEG-KASPLSLLQMASPSGLCV--LVRLPKLICGGKTLPRTLLDILADGT 160
Query: 397 ILKLGYNFQCDIKQLAHSYGEL--ECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLN 454
ILK+G D +L YG + C + + +N L LAE +L L+
Sbjct: 161 ILKVGVGCSEDASKLLQDYGLVVRGCLDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLD 220
Query: 455 KTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
K+ R SNW+ L+++Q+ YAA DA + + +F H+
Sbjct: 221 KSLLLRCSNWDAETLTEDQVIYAARDAQISVALFLHL 257
>gi|432099984|gb|ELK28878.1| Werner syndrome ATP-dependent helicase [Myotis davidii]
Length = 1398
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 80/159 (50%), Gaps = 13/159 (8%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG D EW P Y KG K+++V+++Q+ S+ ++F + ++ V L +L++
Sbjct: 89 VVGFDMEWPPVYSKG-KLSRVALIQLCVSESKCYLFHISSMS-----VFPQGLKMLLENE 142
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQN--VFKEPKGGLSGLAEKILGAGL 453
I K+G + D +L + K + L D+ N + L+GL + + G L
Sbjct: 143 AIKKVGVGIEGDQWKLLRDFDIK--LKSFVELTDVANEKLSSSETWSLNGLVKHLFGKQL 200
Query: 454 --NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
+K+ R SNW+ PL++ Q YAA DA I+ ++
Sbjct: 201 LKDKSIRCSNWKNYPLTEVQKLYAATDAYAGFIIYQKLQ 239
>gi|351708674|gb|EHB11593.1| Exonuclease 3'-5' domain-containing protein 2 [Heterocephalus
glaber]
Length = 612
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 12/184 (6%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV--PDVLDSCLT 389
+E V+GIDCEW ++G K + +S++Q+AS + + L++L + + L L
Sbjct: 91 LEDFPVLGIDCEWV--NLEG-KASPLSLLQMASPSGLCV--LVRLPKLIYGGKTLPKTLL 145
Query: 390 RILQSPGILKLGYNFQCDIKQLAHSYGEL--ECFKHYEMLLDIQNVFKEPKGGLSGLAEK 447
IL ILK+G D +L YG + C + +N L LAE
Sbjct: 146 DILADGTILKVGVGCSEDASKLLQDYGLMVRGCLDLRYLATRQRNSLLCSGLSLKSLAET 205
Query: 448 ILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSEG-HDK 504
+L L+K+ R SNW+ L+++Q+ YAA DA + + +F H+ + +E D
Sbjct: 206 VLNFPLDKSLLLRCSNWDAENLTEDQVTYAARDAQISVALFLHLLGHPFSKNSAEASSDP 265
Query: 505 IEWK 508
I W+
Sbjct: 266 IGWR 269
>gi|410252096|gb|JAA14015.1| exonuclease 3'-5' domain containing 2 [Pan troglodytes]
Length = 621
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 25/217 (11%)
Query: 291 LKTRE---PEAGFVHS---------RFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVV 338
L +RE PE +HS R L K + V D+++ L ++ +E V+
Sbjct: 48 LGSRELPPPEDDQLHSSAPRSSWEERILKAKVVTVSQEAEWDQIEPLLRS--ELEDFPVL 105
Query: 339 GIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV--PDVLDSCLTRILQSPG 396
GIDCEW ++G K + +S++Q+AS + + L++L + + L L IL
Sbjct: 106 GIDCEWV--NLEG-KASPLSLLQMASPSGLCV--LVRLPKLICGGKTLPRTLLDILADGT 160
Query: 397 ILKLGYNFQCDIKQLAHSYGEL--ECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLN 454
ILK+G D +L YG + C + + +N L LAE +L L+
Sbjct: 161 ILKVGVGCSEDASKLLQDYGLVVRGCLDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLD 220
Query: 455 KTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
K+ R SNW+ L+++Q+ YAA DA + + +F H+
Sbjct: 221 KSLLLRCSNWDAETLTEDQVIYAARDAQISVALFLHL 257
>gi|359684501|ref|ZP_09254502.1| ribonuclease D [Leptospira santarosai str. 2000030832]
gi|410449393|ref|ZP_11303448.1| 3'-5' exonuclease [Leptospira sp. Fiocruz LV3954]
gi|410016618|gb|EKO78695.1| 3'-5' exonuclease [Leptospira sp. Fiocruz LV3954]
Length = 388
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
D I VD + L + ++ + +D E Y +KV ++QI++ +I D +
Sbjct: 6 DYIVVDTIRSLQLVLINLGQADSLSVDTESSGYY---TYFSKVCLIQISAKGKNYILDPL 62
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDI---Q 431
KL LD T + ++ ILK+ ++ DIK L +G ++ + D
Sbjct: 63 KLRN-----LDGLGT-LFENKKILKIFHSAIDDIKALKKDFG-----FQFQNIADTGFSS 111
Query: 432 NVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
+ + L+ L + L+K + SNWE+RPL ++QL+YAALD V L I+ ++
Sbjct: 112 RLLDHEQYSLTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLETIWEKMK 170
>gi|301129155|ref|NP_001180289.1| exonuclease 3'-5' domain-containing protein 2 isoform 1 [Homo
sapiens]
gi|301129157|ref|NP_001180290.1| exonuclease 3'-5' domain-containing protein 2 isoform 1 [Homo
sapiens]
gi|301129159|ref|NP_001180291.1| exonuclease 3'-5' domain-containing protein 2 isoform 1 [Homo
sapiens]
gi|301129161|ref|NP_001180292.1| exonuclease 3'-5' domain-containing protein 2 isoform 1 [Homo
sapiens]
gi|410516875|sp|Q9NVH0.2|EXD2_HUMAN RecName: Full=Exonuclease 3'-5' domain-containing protein 2;
AltName: Full=Exonuclease 3'-5' domain-like-containing
protein 2
gi|119601391|gb|EAW80985.1| exonuclease 3'-5' domain-like 2, isoform CRA_b [Homo sapiens]
Length = 621
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 25/217 (11%)
Query: 291 LKTRE---PEAGFVHS---------RFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVV 338
L +RE PE +HS R L K + V D+++ L ++ +E V+
Sbjct: 48 LGSRELPPPEDDQLHSSAPRSSWKERILKAKVVTVSQEAEWDQIEPLLRS--ELEDFPVL 105
Query: 339 GIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV--PDVLDSCLTRILQSPG 396
GIDCEW ++G K + +S++Q+AS + + L++L + + L L IL
Sbjct: 106 GIDCEWV--NLEG-KASPLSLLQMASPSGLCV--LVRLPKLICGGKTLPRTLLDILADGT 160
Query: 397 ILKLGYNFQCDIKQLAHSYGEL--ECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLN 454
ILK+G D +L YG + C + + +N L LAE +L L+
Sbjct: 161 ILKVGVGCSEDASKLLQDYGLVVRGCLDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLD 220
Query: 455 KTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
K+ R SNW+ L+++Q+ YAA DA + + +F H+
Sbjct: 221 KSLLLRCSNWDAETLTEDQVIYAARDAQISVALFLHL 257
>gi|398863884|ref|ZP_10619426.1| ribonuclease D [Pseudomonas sp. GM78]
gi|398246299|gb|EJN31795.1| ribonuclease D [Pseudomonas sp. GM78]
Length = 377
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++Q+ E ++ D
Sbjct: 4 DIHWIRDNDSLGRFCTEWQQLPFVALDTE----FMRVDTFYPIAGLLQVGDGERAYLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + P L +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LTIDNWQP------LAALLENPAVVKVVHACSEDLEVLLRLTGSLPA-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++LG L K S+W QRPLS+ Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLGIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAEVFVKLRP 170
>gi|297695392|ref|XP_002824927.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 1
[Pongo abelii]
gi|297695394|ref|XP_002824928.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 2
[Pongo abelii]
gi|297695396|ref|XP_002824929.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 3
[Pongo abelii]
gi|395746023|ref|XP_003778376.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 [Pongo
abelii]
Length = 621
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 25/217 (11%)
Query: 291 LKTRE---PEAGFVHS---------RFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVV 338
L +RE PE +HS R L K + V D+++ L ++ +E V+
Sbjct: 48 LGSRELPPPEDDQLHSSAPRSSWEERILKAKVVTVSQEAEWDQIEPLLRS--ELEDFPVL 105
Query: 339 GIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV--PDVLDSCLTRILQSPG 396
GIDCEW ++G K + +S++Q+AS + + L++L + + L L IL
Sbjct: 106 GIDCEWV--NLEG-KASPLSLLQMASPSGLCV--LVRLPKLICGGKTLPRTLLDILADGT 160
Query: 397 ILKLGYNFQCDIKQLAHSYGEL--ECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLN 454
ILK+G D +L YG + C + + +N L LAE +L L+
Sbjct: 161 ILKVGVGCSEDASKLLQDYGLVVRGCLDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLD 220
Query: 455 KTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
K+ R SNW+ L+++Q+ YAA DA + + +F H+
Sbjct: 221 KSLLLRCSNWDAETLTEDQVIYAARDAQISVALFLHL 257
>gi|241948847|ref|XP_002417146.1| exosome component 3'-5' exonuclease [Candida dubliniensis CD36]
gi|223640484|emb|CAX44736.1| exosome complex exonuclease RRP6, putative [Candida dubliniensis
CD36]
Length = 776
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 20/201 (9%)
Query: 296 PEAGFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCE---WKPNYVKGC 352
P+A S + K+ IWVD V+ LHK + ++ + +D E ++ Y C
Sbjct: 209 PDAILAKSDPIPPKDWSTTKAIWVDTVEELHKMVPELKKSTEIAVDLEHHDYRSYYGIVC 268
Query: 353 KMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLA 412
+MQI+S E +I D + L +D+ + L + P I+K+ + DI L
Sbjct: 269 ------LMQISSREQDWIVDTLVLRDDL-----TVLNEVFADPNIVKVFHGAFMDIIWLQ 317
Query: 413 HSYG--ELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQN 470
G + F Y P+ L+ L E +K + ++W RPLS
Sbjct: 318 RDLGLYVVSLFDTYHA----SRALGFPRFSLAYLLEVYAHFKTSKQYQLADWRIRPLSPP 373
Query: 471 QLEYAALDAVVLLQIFHHVRS 491
L YA D LL I+ +++
Sbjct: 374 MLAYARSDTHFLLFIYDQLKN 394
>gi|398958756|ref|ZP_10677721.1| ribonuclease D [Pseudomonas sp. GM33]
gi|398145975|gb|EJM34744.1| ribonuclease D [Pseudomonas sp. GM33]
Length = 377
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++Q+ + ++ D
Sbjct: 4 DIHWIRDNDSLGRFCAEWQQLPFVALDTE----FMRVDTFYPIAGLLQVGDGKRAYLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + P L +L++P +LK+ + D++ L G L ++ L +
Sbjct: 60 LTIDNWQP------LAALLENPAVLKVVHACSEDLEVLLRLTGSLPA-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++LG L K S+W QRPLS+ Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLGIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAEVFVKLRP 170
>gi|169615583|ref|XP_001801207.1| hypothetical protein SNOG_10950 [Phaeosphaeria nodorum SN15]
gi|111060329|gb|EAT81449.1| hypothetical protein SNOG_10950 [Phaeosphaeria nodorum SN15]
Length = 637
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 13/215 (6%)
Query: 285 YSLEGFLKTREPEAGFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEW 344
Y L GF +R + + R + + +I++ + K + VVG D EW
Sbjct: 19 YRLLGFDSSRPAKKCWWSYRMYKNADNKLPEILYSKTKEDSEKIVKQFLNEPVVGFDMEW 78
Query: 345 KPN-YVKGCKMNKVSIMQIASDEMVFIFDL-IKLAEDVPDVLDSCLTRILQSPGILKLGY 402
N + K NK+ ++QIAS+ + + + + + V D++ L ++++ P I KLG
Sbjct: 79 PWNDWKKETLQNKIGLIQIASESKIGLIHIGLHPGKTVQDIIAPSLKKLIEDPSIGKLGV 138
Query: 403 N-FQCDIKQLAHSY-----GELECFKHYEMLLDIQNVFKEPKGGLSGLA---EKILGAGL 453
D +L + G +E Y ++ N + + LA E LG L
Sbjct: 139 GILHADFARLRRFFKLSPRGAVELSHLYRLVKFGGNKPEHVSTKMVSLARIVEDQLGHPL 198
Query: 454 NKTR-RNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
K R SNW +PLS +Q+ YAA DA ++H
Sbjct: 199 YKGDVRTSNWS-KPLSTDQINYAAGDAYAGYMLYH 232
>gi|220905226|ref|YP_002480538.1| 3'-5' exonuclease [Desulfovibrio desulfuricans subsp. desulfuricans
str. ATCC 27774]
gi|219869525|gb|ACL49860.1| 3'-5' exonuclease [Desulfovibrio desulfuricans subsp. desulfuricans
str. ATCC 27774]
Length = 214
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 15/159 (9%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
++G D E +P++ KG + N +++Q+A+ V++ L L L +L +P
Sbjct: 47 SILGFDTETRPSFRKG-RRNSPALIQLATARAVYLIQLSWLP------FGPHLADLLANP 99
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEM--LLDIQNVFKEPKGGLSGLAEKILGAGL 453
+K G + D++ LA +L F+ + L + K P GL LA G +
Sbjct: 100 VQVKAGVGIRDDMRDLA----KLHDFEPAGLVDLGGVARAHKLPSQGLRTLAANFFGWRV 155
Query: 454 NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSC 492
+K + SNW LS Q+ YAA DA + IF +R C
Sbjct: 156 SKGSQCSNWSLPELSARQIAYAATDAWIGRLIF--IRMC 192
>gi|451927487|gb|AGF85365.1| exonuclease [Moumouvirus goulette]
Length = 407
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 335 CKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQS 394
K +G D E + G K+ K SI+QI+S+E I + K+ L L +
Sbjct: 141 VKFIGFDTETN---ITG-KVEKPSIIQISSNEKNLIVQINKMT-----TLPEKLYELFSD 191
Query: 395 PGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKG-------GLSGLAEK 447
I+K+G + + D + + EL+C K L D+ +F K GL LA
Sbjct: 192 SNIIKIGVSIKNDANNITKYFSELKCMKSVLDLSDLAKIFIPNKFENKINDIGLKTLAAY 251
Query: 448 ILGAGL-NKTR---RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
ILG + NK + SNW L+ +Q+ YA D+ + L++F+ + + S D
Sbjct: 252 ILGVYVENKDLCDVKKSNWNDEILTIDQVNYAITDSWISLEMFNKLVTDSNSYD 305
>gi|45659084|ref|YP_003170.1| ribonuclease D [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|294828464|ref|NP_714272.2| ribonuclease D [Leptospira interrogans serovar Lai str. 56601]
gi|386075688|ref|YP_005990008.1| ribonuclease D [Leptospira interrogans serovar Lai str. IPAV]
gi|417761741|ref|ZP_12409746.1| 3'-5' exonuclease [Leptospira interrogans str. 2002000624]
gi|417771399|ref|ZP_12419294.1| 3'-5' exonuclease [Leptospira interrogans serovar Pomona str.
Pomona]
gi|417772941|ref|ZP_12420827.1| 3'-5' exonuclease [Leptospira interrogans str. 2002000621]
gi|417785994|ref|ZP_12433691.1| 3'-5' exonuclease [Leptospira interrogans str. C10069]
gi|418667421|ref|ZP_13228833.1| 3'-5' exonuclease [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|418671067|ref|ZP_13232422.1| 3'-5' exonuclease [Leptospira interrogans str. 2002000623]
gi|418683302|ref|ZP_13244507.1| 3'-5' exonuclease [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|418692063|ref|ZP_13253144.1| 3'-5' exonuclease [Leptospira interrogans str. FPW2026]
gi|418702415|ref|ZP_13263323.1| 3'-5' exonuclease [Leptospira interrogans serovar Bataviae str.
L1111]
gi|418704115|ref|ZP_13264995.1| 3'-5' exonuclease [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|418710116|ref|ZP_13270898.1| 3'-5' exonuclease [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|418728912|ref|ZP_13287481.1| 3'-5' exonuclease [Leptospira interrogans str. UI 12758]
gi|421083604|ref|ZP_15544478.1| 3'-5' exonuclease [Leptospira santarosai str. HAI1594]
gi|421101603|ref|ZP_15562215.1| 3'-5' exonuclease [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|421115524|ref|ZP_15575929.1| 3'-5' exonuclease [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|421126273|ref|ZP_15586510.1| 3'-5' exonuclease [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421135637|ref|ZP_15595758.1| 3'-5' exonuclease [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|45602330|gb|AAS71807.1| ribonuclease D [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|293386317|gb|AAN51290.2| ribonuclease D [Leptospira interrogans serovar Lai str. 56601]
gi|353459480|gb|AER04025.1| ribonuclease D [Leptospira interrogans serovar Lai str. IPAV]
gi|400324875|gb|EJO77159.1| 3'-5' exonuclease [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|400358126|gb|EJP14242.1| 3'-5' exonuclease [Leptospira interrogans str. FPW2026]
gi|409942474|gb|EKN88086.1| 3'-5' exonuclease [Leptospira interrogans str. 2002000624]
gi|409946596|gb|EKN96605.1| 3'-5' exonuclease [Leptospira interrogans serovar Pomona str.
Pomona]
gi|409950823|gb|EKO05345.1| 3'-5' exonuclease [Leptospira interrogans str. C10069]
gi|410012826|gb|EKO70912.1| 3'-5' exonuclease [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410020301|gb|EKO87105.1| 3'-5' exonuclease [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410368775|gb|EKP24151.1| 3'-5' exonuclease [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410433965|gb|EKP78302.1| 3'-5' exonuclease [Leptospira santarosai str. HAI1594]
gi|410436223|gb|EKP85342.1| 3'-5' exonuclease [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|410577276|gb|EKQ40272.1| 3'-5' exonuclease [Leptospira interrogans str. 2002000621]
gi|410581930|gb|EKQ49736.1| 3'-5' exonuclease [Leptospira interrogans str. 2002000623]
gi|410757024|gb|EKR18642.1| 3'-5' exonuclease [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|410758584|gb|EKR24813.1| 3'-5' exonuclease [Leptospira interrogans serovar Bataviae str.
L1111]
gi|410766337|gb|EKR37024.1| 3'-5' exonuclease [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|410769574|gb|EKR44805.1| 3'-5' exonuclease [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|410776315|gb|EKR56294.1| 3'-5' exonuclease [Leptospira interrogans str. UI 12758]
gi|455667095|gb|EMF32456.1| 3'-5' exonuclease [Leptospira interrogans serovar Pomona str. Fox
32256]
gi|455792168|gb|EMF43937.1| 3'-5' exonuclease [Leptospira interrogans serovar Lora str. TE
1992]
gi|456823784|gb|EMF72221.1| 3'-5' exonuclease [Leptospira interrogans serovar Canicola str.
LT1962]
gi|456966971|gb|EMG08438.1| 3'-5' exonuclease [Leptospira interrogans serovar Grippotyphosa
str. LT2186]
Length = 388
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
D I VD L + ++ + +D E Y +KV ++QI++ +I D +
Sbjct: 6 DYIVVDTARSLQLVLINLSQADSISVDTESSGYY---TYFSKVCLIQISAKGKNYIIDPL 62
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDI---Q 431
KL L+S L + + ILK+ ++ DIK L +G ++ + D
Sbjct: 63 KLQN-----LES-LGNLFEDKKILKIFHSAIDDIKALKKDFG-----FQFQNIADTGFSS 111
Query: 432 NVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
+ + L+ L + L+K + SNWE+RPL ++QL+YAALD V L I+ ++
Sbjct: 112 RLLDHEQYSLTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLETIWEKMK 170
>gi|409073194|gb|EKM73966.1| hypothetical protein AGABI1DRAFT_95962, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 595
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 91/211 (43%), Gaps = 31/211 (14%)
Query: 322 VDGLHKAICHIEGCKVVGIDCEWK----PNYVKGCKMNKVSIMQIASDEMVFIFDL-IKL 376
VDG H A VG D EW P G + K +++QIA V++ + L
Sbjct: 128 VDGGHIA---------VGFDTEWNVEISPQGYIG-QSGKTAVIQIAYQNRVYVLQISTAL 177
Query: 377 AEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE 436
AE L L +L+ P + K+G D+ +L + E F +D+ + KE
Sbjct: 178 AEGK---LPQKLKLLLEHPRVFKVGRLINIDLSRLQSACHETCIFTGG---VDLAKLAKE 231
Query: 437 -------PKGGLSGLAEKILGAGLNKT---RRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
K GL+ L +L LNK R N WE L+Q QLEYAA DA V L ++
Sbjct: 232 RGLIHDISKCGLADLCALVLKKRLNKMTLIRLNEQWENANLTQEQLEYAAKDACVSLLVY 291
Query: 487 HHVRSCSQPTDVSEGHDKIEWKSYIVSHMDN 517
+ S PT +S+ I +V DN
Sbjct: 292 EQLMKLSIPTPLSKSDVLISHSPILVYSTDN 322
>gi|195644322|gb|ACG41629.1| hypothetical protein [Zea mays]
Length = 202
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 14/173 (8%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
W+ E+ LH+ + +VG+D EW+P++ G N V+ +Q+ IF L+ A
Sbjct: 30 WIAEILALHRPGSNGYSI-IVGLDVEWRPSF--GPHQNPVATLQLCVGHSCLIFQLL-YA 85
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEP 437
+ VP L L GI +G + D ++L+ +G L ++ P
Sbjct: 86 DYVP----GALAEFLGDRGIRFVGVGVEADAERLSDDHG-LVVANAEDLRXRXAERMXRP 140
Query: 438 ---KGGLSGLAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ GL + ++G L K +R S W+ LS Q++YA +DA V ++
Sbjct: 141 DLRQAGLRAXVQVVMGVNLVKPQRVTMSRWDASCLSYEQIKYACIDAFVSFEV 193
>gi|421121879|ref|ZP_15582169.1| 3'-5' exonuclease [Leptospira interrogans str. Brem 329]
gi|410345216|gb|EKO96335.1| 3'-5' exonuclease [Leptospira interrogans str. Brem 329]
Length = 388
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
D I VD L + ++ + +D E Y +KV ++QI++ +I D +
Sbjct: 6 DYIVVDTARSLQLVLINLSQADSISVDTESSGYY---TYFSKVCLIQISAKGKNYIIDPL 62
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDI---Q 431
KL L+S L + + ILK+ ++ DIK L +G ++ + D
Sbjct: 63 KLQN-----LES-LGNLFEDKKILKIFHSAIDDIKALKKDFG-----FQFQNIADTGFSS 111
Query: 432 NVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
+ + L+ L + L+K + SNWE+RPL ++QL+YAALD V L I+ ++
Sbjct: 112 RLLDHEQYSLTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLETIWEKMK 170
>gi|108760811|ref|YP_634116.1| ribonuclease D [Myxococcus xanthus DK 1622]
gi|108464691|gb|ABF89876.1| putative ribonuclease D [Myxococcus xanthus DK 1622]
Length = 389
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 81/187 (43%), Gaps = 19/187 (10%)
Query: 319 VDEVD--GLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKL 376
VD VD G A +E + + +D E + ++ +Q+A+D+ VF+ D ++
Sbjct: 9 VDVVDASGEESATRTLEAAREIAVDLEADSMHAFRARL---CFLQLATDDQVFLLDTLQ- 64
Query: 377 AEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQ---NV 433
P V+ L ++ P K + Q D++ LA E + L D +
Sbjct: 65 ----PGVVPGMLAPLMADPARTKFFHAAQGDLQFLA------EVGVRVQGLFDTHRAATL 114
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCS 493
PK GL+ LA + LG L K + S++ RPL EY A D L ++ VR
Sbjct: 115 LGWPKVGLADLARERLGVELPKEHQQSDFSIRPLPPGMREYIANDVRYLCELGRQVRDAC 174
Query: 494 QPTDVSE 500
+ D+ E
Sbjct: 175 READILE 181
>gi|358054859|dbj|GAA99072.1| hypothetical protein E5Q_05761 [Mixia osmundae IAM 14324]
Length = 566
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 21/162 (12%)
Query: 338 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGI 397
+G+D EW + K + NKVS++QI + I+ I + VP VL + +L+ +
Sbjct: 259 LGMDLEWNVSKRK-AQTNKVSLVQICDARQIIIYQ-IPPGQGVPQVLRA----LLEDAAV 312
Query: 398 LKLGYNFQCDIKQLAHSYGELECFKHYEM-----LLDIQNVFKEPK----GGLSGL-AEK 447
K+G N D K+L + +++C E+ L+D + K+ LSG+ EK
Sbjct: 313 WKIGVNIGNDGKKLEKDH-DVDCKGLLELTKAARLVDAPTLEKKRAIVSLQELSGIYLEK 371
Query: 448 ILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L G +T S+WE RPL+ Q+ YAA D LQIF +
Sbjct: 372 YLPKGEVRT---SDWE-RPLTSEQVNYAAHDVFAGLQIFRRL 409
>gi|222628291|gb|EEE60423.1| hypothetical protein OsJ_13625 [Oryza sativa Japonica Group]
Length = 290
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 25/177 (14%)
Query: 329 ICHIEGCKV-----VGIDCEWKPNYVKGCKMNKVSIMQIASDEM-VFIFDLIKLAEDVPD 382
+C IE K +G D EW+P +G KV++MQ+ + ++ +I VP
Sbjct: 117 LCKIETMKASGQVSLGFDLEWRPFPRRGDPPCKVAVMQLCMERTRCYVMHIIH--SGVPP 174
Query: 383 VLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV------FKE 436
VL S +L+ +K+G D +++ + Y H + L+D+ N+ F
Sbjct: 175 VLKS----LLEDSSSVKVGICIDNDARKMFNDYD-----VHVQPLMDLSNLANAKLGFPP 225
Query: 437 PKGGLSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
+ L+ L E + L K R NWE LS+ QL+YAA DA + ++ ++S
Sbjct: 226 KRWSLASLTEMVTCRELPKPSNIRMGNWEAYVLSKQQLQYAATDAYISWHLYEVLQS 282
>gi|456983567|gb|EMG19831.1| 3'-5' exonuclease [Leptospira interrogans serovar Copenhageni str.
LT2050]
Length = 388
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
D I VD L + ++ + +D E Y +KV ++QI++ +I D +
Sbjct: 6 DYIVVDTARSLQLVLINLSQADSISVDTESSGYY---TYFSKVCLIQISAKGKNYIIDPL 62
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDI---Q 431
KL L+S L + + ILK+ ++ DIK L +G ++ + D
Sbjct: 63 KLQN-----LES-LGNLFEDKKILKIFHSAIDDIKALKKDFG-----FQFQNIADTGFSS 111
Query: 432 NVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
+ + L+ L + L+K + SNWE+RPL ++QL+YAALD V L I+ ++
Sbjct: 112 RLLDHEQYSLTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLETIWEKMK 170
>gi|374299652|ref|YP_005051291.1| ribonuclease D [Desulfovibrio africanus str. Walvis Bay]
gi|332552588|gb|EGJ49632.1| ribonuclease D [Desulfovibrio africanus str. Walvis Bay]
Length = 409
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 85/192 (44%), Gaps = 16/192 (8%)
Query: 298 AGFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKG-CKMNK 356
AG L +V + I V + L + + GC VG+D E +V+
Sbjct: 8 AGGYEGPAPELPGVVDSEAILVQSAEALGELCSRLRGCDAVGMDTE----FVRSRTYFPT 63
Query: 357 VSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAH--S 414
+ ++Q+ +D VF+ D + + + P L IL P ++K+ ++ Q D++ L +
Sbjct: 64 LGLIQLVADGGVFLVDPLGVDDLSP------LVEILADPRLIKIFHSCQEDLEALYYLCG 117
Query: 415 YGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEY 474
+ F + F+ G L + + G L+K SNW +RPLS++QL Y
Sbjct: 118 FAPGPVFDTQVAASFLGYGFQP---GYGSLVKALFGVELDKDETRSNWIKRPLSESQLIY 174
Query: 475 AALDAVVLLQIF 486
AA D L ++
Sbjct: 175 AAQDVRYLPAMY 186
>gi|255573515|ref|XP_002527682.1| 3-5 exonuclease, putative [Ricinus communis]
gi|223532913|gb|EEF34681.1| 3-5 exonuclease, putative [Ricinus communis]
Length = 211
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 27/194 (13%)
Query: 301 VHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIM 360
+H+ H LV + W+ E G + +VG+D EW+PN+ + + N V+ +
Sbjct: 27 IHTLVTHSPSLVEQ---WLIETQGQNNQT----QPTIVGLDVEWRPNFSRHIE-NPVATL 78
Query: 361 QIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELEC 420
Q+ I+ LI + +P L L++ + G + D+++L YG
Sbjct: 79 QLCIGSRCLIYQLIH-SPRIP----QSLFDFLKNSSYVFAGVGIESDVEKLVEDYG---- 129
Query: 421 FKHYEMLLDIQNVFKEPKG-------GLSGLAEKILGAGLNKTRR--NSNWEQRPLSQNQ 471
+++++ V E G GL L +++LG + K +R S W+ LS +Q
Sbjct: 130 -LSVGNVMELRRVAAESLGVKELKNAGLKELVKQVLGKEIQKPKRVTMSRWDSMWLSHDQ 188
Query: 472 LEYAALDAVVLLQI 485
++YA LDA V +I
Sbjct: 189 VQYACLDAFVCSEI 202
>gi|225848519|ref|YP_002728682.1| DNA polymerase I [Sulfurihydrogenibium azorense Az-Fu1]
gi|225643280|gb|ACN98330.1| DNA polymerase I [Sulfurihydrogenibium azorense Az-Fu1]
Length = 586
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 20/171 (11%)
Query: 355 NKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHS 414
+KV ++QI + E +F+ D K+ D L L +L+S GI+ G+N + D+K LA +
Sbjct: 43 DKVRLIQIGTQEDIFVIDAFKVERDT---LKEFLKEVLESKGIV--GHNLKFDLKFLATN 97
Query: 415 YGE-----LECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQ 469
+ + F ++L N K LS +A ++ ++KT + S W L++
Sbjct: 98 FDVYPKVVFDTFIASKILAKGDN---SQKHSLSAVAVRLTDEEVDKTYQTSPWWVENLTK 154
Query: 470 NQLEYAALDAVVLLQIFHH--VRSCSQPTDVSEGHDKIEWKSYIVSHMDNP 518
Q+EY+A D VL IF VR + T H K ++Y V + NP
Sbjct: 155 EQIEYSAKDIEVLRSIFREQVVRLNEEQT-----HLKSSGETYKVFGVVNP 200
>gi|218442029|ref|YP_002380358.1| cell division protein FtsK [Cyanothece sp. PCC 7424]
gi|218174757|gb|ACK73490.1| cell divisionFtsK/SpoIIIE [Cyanothece sp. PCC 7424]
Length = 648
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 89/184 (48%), Gaps = 16/184 (8%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASD---EMVFIFDLI 374
++ + + + AI + K + +D E Y +++ + I+ + V++ D++
Sbjct: 3 YLTKPEDIKTAISKLVHYKTLWLDTEIADWYTPNPRLSLIQILTNPKNIEENNVYVLDVL 62
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDI---- 430
D PD++ + +I+++P I K+ +N DIK L G E K+ L I
Sbjct: 63 ----DKPDLIQDFINQIMKNPQIEKVFHNASFDIKYL----GGKEEVKNVTCTLKIAKKI 114
Query: 431 -QNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
++ P L LAE + + + ++ S+W +RPL++ QL YA +D V L + H++
Sbjct: 115 GKHSLNVPNLKLKTLAEYLCNLPIVEDQQASDWGKRPLTELQLNYAKMDVVYLANVHHYL 174
Query: 490 RSCS 493
+ +
Sbjct: 175 LTLN 178
>gi|7595900|gb|AAF64490.1|AF241636_1 WRN protein [Mus musculus]
Length = 1401
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG D EW P Y G K ++V+++Q+ S+ ++F + ++ V L +L++
Sbjct: 72 VVGFDMEWPPIYKPG-KRSRVAVIQLCVSENKCYLFHISSMS-----VFPQGLKMLLENK 125
Query: 396 GILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDIQN--VFKEPKGGLSGLAEKILGAG 452
I K G + D +L + +LE F L D+ N + L+GL + +LG
Sbjct: 126 SIKKAGVGIEGDQWKLLRDFDVKLESFVE---LTDVANEKLKCAETWSLNGLVKHVLGKQ 182
Query: 453 L--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L +K+ R SNW PL+++Q YAA DA L I+ +
Sbjct: 183 LLKDKSIRCSNWSNFPLTEDQKLYAATDAYAGLIIYQKL 221
>gi|170763502|ref|NP_035851.3| Werner syndrome ATP-dependent helicase homolog [Mus musculus]
gi|170763504|ref|NP_001116294.1| Werner syndrome ATP-dependent helicase homolog [Mus musculus]
gi|342187359|sp|O09053.3|WRN_MOUSE RecName: Full=Werner syndrome ATP-dependent helicase homolog;
AltName: Full=Exonuclease WRN
gi|3885838|gb|AAC78077.1| Wrn protein [Mus musculus]
gi|29748014|gb|AAH50921.1| Wrn protein [Mus musculus]
gi|38173728|gb|AAH60700.1| Wrn protein [Mus musculus]
Length = 1401
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG D EW P Y G K ++V+++Q+ S+ ++F + ++ V L +L++
Sbjct: 72 VVGFDMEWPPIYKPG-KRSRVAVIQLCVSESKCYLFHISSMS-----VFPQGLKMLLENK 125
Query: 396 GILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDIQN--VFKEPKGGLSGLAEKILGAG 452
I K G + D +L + +LE F L D+ N + L+GL + +LG
Sbjct: 126 SIKKAGVGIEGDQWKLLRDFDVKLESFVE---LTDVANEKLKCAETWSLNGLVKHVLGKQ 182
Query: 453 L--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L +K+ R SNW PL+++Q YAA DA L I+ +
Sbjct: 183 LLKDKSIRCSNWSNFPLTEDQKLYAATDAYAGLIIYQKL 221
>gi|403346454|gb|EJY72625.1| 3'-5' exonuclease domain containing protein [Oxytricha trifallax]
Length = 661
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 26/170 (15%)
Query: 331 HIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTR 390
+ E C ++G+DCE + +S++QI +++ F+FD++KL + L CL
Sbjct: 87 NYESCIILGVDCEGL------SRTQPLSLVQIGNEDKCFLFDILKL-----NGLPKCLKN 135
Query: 391 ILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLD---IQNVFKEPKG---GLSGL 444
+L+ P I+K+ ++F D L Y + C + ++ + I EP+ L+ L
Sbjct: 136 VLEDPDIIKIFHDFCEDTAALVQQYN-VHCDRVFDTQIAHRIINQDSDEPRDQNISLNHL 194
Query: 445 AEKILGAGLNKT--------RRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
++ + ++ + W QRPLSQ EYAA D + L ++
Sbjct: 195 LKEYIQVENDQKETICSYMKKEPGFWWQRPLSQIMQEYAAQDVIFLPSVY 244
>gi|114046520|ref|YP_737070.1| 3'-5' exonuclease [Shewanella sp. MR-7]
gi|113887962|gb|ABI42013.1| 3'-5' exonuclease [Shewanella sp. MR-7]
Length = 303
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 89/174 (51%), Gaps = 9/174 (5%)
Query: 310 ELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVF 369
E+ VE + + D L A+ + V+G D E + ++ +G + + +S++Q+A+ + +
Sbjct: 95 EIRVEMRVELVTPDTLATALQQLSSESVLGFDTETRASFERGVQ-HPLSLVQLATSDTCY 153
Query: 370 IFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLD 429
+F L E + + L +L++ ILK+G + D + L + +++ ++
Sbjct: 154 LFQRAVLGERLAE-----LKPLLENEQILKVGIGLRGDGQALKRDW-DIQVSPRLDLNWA 207
Query: 430 IQNVFKEPKGGLSGLAEKILGAGLNKTRRN--SNWEQRPLSQNQLEYAALDAVV 481
+ + + G L +L ++K ++ SNW+Q PLSQ Q++YA LDA+
Sbjct: 208 MAQLGAGKEMGTRQLVAALLHKRIDKPKKITLSNWQQVPLSQAQIQYAVLDALA 261
>gi|398925909|ref|ZP_10662148.1| ribonuclease D [Pseudomonas sp. GM48]
gi|398171503|gb|EJM59405.1| ribonuclease D [Pseudomonas sp. GM48]
Length = 377
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++Q+ E ++ D
Sbjct: 4 DIHWIRDNDSLGRLCAEWQQLPFVALDTE----FMRVDTFYPIAGLLQVGDGERAYLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + P +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LSIDNWQP------FAALLENPAVVKVVHACSEDLEVLLRLTGSLPA-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++LG L K S+W QRPLS+ Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLGIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAEVFVKLRP 170
>gi|2130973|dbj|BAA20269.1| WRN typeI [Mus musculus]
gi|2130975|dbj|BAA20270.1| WRN typeII [Mus musculus]
Length = 1401
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG D EW P Y G K ++V+++Q+ S+ ++F + ++ V L +L++
Sbjct: 72 VVGFDMEWPPIYKPG-KRSRVAVIQLCVSENKCYLFHISSMS-----VFPQGLKMLLENK 125
Query: 396 GILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDIQN--VFKEPKGGLSGLAEKILGAG 452
I K G + D +L + +LE F L D+ N + L+GL + +LG
Sbjct: 126 SIKKAGVGIEGDQWKLLRDFDVKLESFVE---LTDVANEKLKCAETWSLNGLVKHVLGKQ 182
Query: 453 L--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L +K+ R SNW PL+++Q YAA DA L I+ +
Sbjct: 183 LLKDKSIRCSNWSNFPLTEDQKLYAATDAYAGLIIYQKL 221
>gi|407261615|ref|XP_003946318.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Mus
musculus]
Length = 1434
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG D EW P Y G K ++V+++Q+ S+ ++F + ++ V L +L++
Sbjct: 139 VVGFDMEWPPIYKPG-KRSRVAVIQLCVSENKCYLFHISSMS-----VFPQGLKMLLENK 192
Query: 396 GILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDIQN--VFKEPKGGLSGLAEKILGAG 452
I K G + D +L + +LE F L D+ N + L+GL + +LG
Sbjct: 193 SIKKAGVGIEGDQWKLLRDFDVKLESFVE---LTDVANEKLKCAETWSLNGLVKHVLGKQ 249
Query: 453 L--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L +K+ R SNW PL+++Q YAA DA L I+ +
Sbjct: 250 LLKDKSIRCSNWSNFPLTEDQKLYAATDAYAGLIIYQKL 288
>gi|418746085|ref|ZP_13302416.1| 3'-5' exonuclease [Leptospira santarosai str. CBC379]
gi|410792916|gb|EKR90840.1| 3'-5' exonuclease [Leptospira santarosai str. CBC379]
Length = 388
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
D I VD + L + ++ + +D E Y +KV ++QI++ +I D +
Sbjct: 6 DYIVVDTIRSLQLVLINLGQADSLSVDTESSGYY---TYFSKVCLIQISAKGKNYILDPL 62
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDI---Q 431
KL LD T + ++ ILK+ ++ DIK L +G ++ + D
Sbjct: 63 KLRN-----LDGLGT-LFENKKILKIFHSAIDDIKALKKDFG-----FQFQNIADTGFSS 111
Query: 432 NVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
+ + L+ L + L+K + SNWE+RPL ++QL+YAALD V L I+ ++
Sbjct: 112 RLLDHEQYSLTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLETIWGKMK 170
>gi|418679035|ref|ZP_13240300.1| 3'-5' exonuclease [Leptospira kirschneri serovar Grippotyphosa str.
RM52]
gi|418685440|ref|ZP_13246616.1| 3'-5' exonuclease [Leptospira kirschneri serovar Grippotyphosa str.
Moskva]
gi|418740873|ref|ZP_13297249.1| 3'-5' exonuclease [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|421089663|ref|ZP_15550467.1| 3'-5' exonuclease [Leptospira kirschneri str. 200802841]
gi|421131604|ref|ZP_15591784.1| 3'-5' exonuclease [Leptospira kirschneri str. 2008720114]
gi|400320450|gb|EJO68319.1| 3'-5' exonuclease [Leptospira kirschneri serovar Grippotyphosa str.
RM52]
gi|410001487|gb|EKO52083.1| 3'-5' exonuclease [Leptospira kirschneri str. 200802841]
gi|410356978|gb|EKP04263.1| 3'-5' exonuclease [Leptospira kirschneri str. 2008720114]
gi|410740048|gb|EKQ84770.1| 3'-5' exonuclease [Leptospira kirschneri serovar Grippotyphosa str.
Moskva]
gi|410751468|gb|EKR08445.1| 3'-5' exonuclease [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 388
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
D I VD L + ++ + +D E Y +KV ++QI++ +I D +
Sbjct: 6 DYIVVDTTRSLQLVLINLSQADSISVDTESSGYY---TYFSKVCLIQISAKGKNYIIDPL 62
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDI---Q 431
KL L+S L + + ILK+ ++ DIK L +G ++ + D
Sbjct: 63 KLQN-----LES-LGNLFEDKKILKIFHSAIDDIKALKKDFG-----FQFQNIADTGFSS 111
Query: 432 NVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
+ + L+ L + L+K + SNWE+RPL ++QL+YAALD V L I+ ++
Sbjct: 112 RLLDHEQYSLTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLETIWAKMK 170
>gi|418752957|ref|ZP_13309213.1| 3'-5' exonuclease [Leptospira santarosai str. MOR084]
gi|422002805|ref|ZP_16350040.1| ribonuclease D [Leptospira santarosai serovar Shermani str. LT 821]
gi|409966640|gb|EKO34481.1| 3'-5' exonuclease [Leptospira santarosai str. MOR084]
gi|417258550|gb|EKT87937.1| ribonuclease D [Leptospira santarosai serovar Shermani str. LT 821]
Length = 388
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
D I VD + L + ++ + +D E Y +KV ++QI++ +I D +
Sbjct: 6 DYIVVDTIRSLQLVLINLGQADSLSVDTESSGYY---TYFSKVCLIQISAKGKNYILDPL 62
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDI---Q 431
KL LD T + ++ ILK+ ++ DIK L +G ++ + D
Sbjct: 63 KLRN-----LDGLGT-LFENKKILKIFHSAIDDIKALKKDFG-----FQFQNIADTGFSS 111
Query: 432 NVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
+ + L+ L + L+K + SNWE+RPL ++QL+YAALD V L I+ ++
Sbjct: 112 RLLDHEQYSLTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLETIWGKMK 170
>gi|398340441|ref|ZP_10525144.1| ribonuclease III [Leptospira kirschneri serovar Bim str. 1051]
gi|418693755|ref|ZP_13254804.1| 3'-5' exonuclease [Leptospira kirschneri str. H1]
gi|421106132|ref|ZP_15566708.1| 3'-5' exonuclease [Leptospira kirschneri str. H2]
gi|409958332|gb|EKO17224.1| 3'-5' exonuclease [Leptospira kirschneri str. H1]
gi|410008854|gb|EKO62514.1| 3'-5' exonuclease [Leptospira kirschneri str. H2]
Length = 388
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
D I VD L + ++ + +D E Y +KV ++QI++ +I D +
Sbjct: 6 DYIVVDTTRSLQLVLINLSQADSISVDTESSGYY---TYFSKVCLIQISAKGKNYIIDPL 62
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDI---Q 431
KL L+S L + + ILK+ ++ DIK L +G ++ + D
Sbjct: 63 KLQN-----LES-LGNLFEDKKILKIFHSAIDDIKALKKDFG-----FQFQNIADTGFSS 111
Query: 432 NVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
+ + L+ L + L+K + SNWE+RPL ++QL+YAALD V L I+ ++
Sbjct: 112 RLLDHEQYSLTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLETIWAKMK 170
>gi|332228976|ref|XP_003263664.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 1
[Nomascus leucogenys]
gi|332228978|ref|XP_003263665.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 2
[Nomascus leucogenys]
gi|332228980|ref|XP_003263666.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 3
[Nomascus leucogenys]
gi|332228982|ref|XP_003263667.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 4
[Nomascus leucogenys]
Length = 621
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 103/217 (47%), Gaps = 25/217 (11%)
Query: 291 LKTRE---PEAGFVHS---------RFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVV 338
L +RE PE +HS R L K + V D+++ L ++ +E V+
Sbjct: 48 LGSRELPPPEDDQLHSSAPRSSWEERILKAKVVTVSQEAEWDQIEPLLRS--ELEDFPVL 105
Query: 339 GIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV--PDVLDSCLTRILQSPG 396
GIDCEW ++G K + +S++Q+AS + + L++L + + L L IL
Sbjct: 106 GIDCEWV--NLEG-KASPLSLLQMASPSGLCV--LVRLPKLICGGKTLPRTLLDILADGT 160
Query: 397 ILKLGYNFQCDIKQLAHSYGEL--ECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLN 454
ILK+G D +L YG + C + + +N L LAE +L L+
Sbjct: 161 ILKVGVGCSEDASKLLQDYGLVVRGCLDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLD 220
Query: 455 KTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
K+ R SNW L+++Q+ YAA DA + + +F H+
Sbjct: 221 KSLLLRCSNWNAETLTEDQVIYAARDAQISVALFLHL 257
>gi|148703462|gb|EDL35409.1| Werner syndrome homolog (human) [Mus musculus]
Length = 1385
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG D EW P Y G K ++V+++Q+ S+ ++F + ++ V L +L++
Sbjct: 72 VVGFDMEWPPIYKPG-KRSRVAVIQLCVSENKCYLFHISSMS-----VFPQGLKMLLENK 125
Query: 396 GILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDIQN--VFKEPKGGLSGLAEKILGAG 452
I K G + D +L + +LE F L D+ N + L+GL + +LG
Sbjct: 126 SIKKAGVGIEGDQWKLLRDFDVKLESFVE---LTDVANEKLKCAETWSLNGLVKHVLGKQ 182
Query: 453 L--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L +K+ R SNW PL+++Q YAA DA L I+ +
Sbjct: 183 LLKDKSIRCSNWSNFPLTEDQKLYAATDAYAGLIIYQKL 221
>gi|74142907|dbj|BAE42489.1| unnamed protein product [Mus musculus]
Length = 862
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG D EW P Y G K ++V+++Q+ S+ ++F + ++ V L +L++
Sbjct: 72 VVGFDMEWPPIYKPG-KRSRVAVIQLCVSESKCYLFHISSMS-----VFPQGLKMLLENK 125
Query: 396 GILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDIQN--VFKEPKGGLSGLAEKILGAG 452
I K G + D +L + +LE F L D+ N + L+GL + +LG
Sbjct: 126 SIKKAGVGIEGDQWKLLRDFDVKLESFVE---LTDVANEKLKCAETWSLNGLVKHVLGKQ 182
Query: 453 L--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L +K+ R SNW PL+++Q YAA DA L I+ +
Sbjct: 183 LLKDKSIRCSNWSNFPLTEDQKLYAATDAYAGLIIYQKL 221
>gi|428311726|ref|YP_007122703.1| ribonuclease D [Microcoleus sp. PCC 7113]
gi|428253338|gb|AFZ19297.1| ribonuclease D [Microcoleus sp. PCC 7113]
Length = 186
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 90/187 (48%), Gaps = 13/187 (6%)
Query: 317 IWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASD---EMVFIFDL 373
+++ + ++ I + CK++ +D E + +++ + + +D E +I D+
Sbjct: 3 LYLTQSADIYSLITQLASCKILWLDTEVADWHTPNPRLSLIQALTEPTDLIGESAYILDV 62
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLA--HSYGELEC-FKHYEMLL-- 428
+ D P ++ + +I+ +P I K+ +N D++ L + C FK L
Sbjct: 63 L----DKPKLVTYFVNQIMANPNIEKVFHNASFDVRYLGGKEQVKNVTCTFKMVNKLTKK 118
Query: 429 DIQNVFKEPKGGLSGLAEKILG-AGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
+N+ K L LA ++ + ++ + S+W QRPL++ QL+YA +D V L +
Sbjct: 119 SRRNLLKISNKKLKTLAVELCQFSNVDTEEQQSDWGQRPLTEKQLQYAKMDTVYLAHVHR 178
Query: 488 HVRSCSQ 494
H+ + S+
Sbjct: 179 HLLALSK 185
>gi|74196546|dbj|BAE34397.1| unnamed protein product [Mus musculus]
Length = 265
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG D EW P Y G K ++V+++Q+ S+ ++F + ++ V L +L++
Sbjct: 72 VVGFDMEWPPIYKPG-KRSRVAVIQLCVSENKCYLFHISSMS-----VFPQGLKMLLENK 125
Query: 396 GILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDIQN--VFKEPKGGLSGLAEKILGAG 452
I K G + D +L + +LE F L D+ N + L+GL + +LG
Sbjct: 126 SIKKAGVGIEGDQWKLLRDFDVKLESFVE---LTDVANEKLKCAETWSLNGLVKHVLGKQ 182
Query: 453 L--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L +K+ R SNW PL+++Q YAA DA L I+ +
Sbjct: 183 LLKDKSIRCSNWSNFPLTEDQKLYAATDAYAGLIIYQKL 221
>gi|3851581|gb|AAC72359.1| Wrn protein [Mus musculus]
Length = 988
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG D EW P Y G K ++V+++Q+ S+ ++F + ++ V L +L++
Sbjct: 72 VVGFDMEWPPIYKPG-KRSRVAVIQLCVSENKCYLFHISSMS-----VFPQGLKMLLENK 125
Query: 396 GILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDIQN--VFKEPKGGLSGLAEKILGAG 452
I K G + D +L + +LE F L D+ N + L+GL + +LG
Sbjct: 126 SIKKAGVGIEGDQWKLLRDFDVKLESFVE---LTDVANEKLKCAETWSLNGLVKHVLGKQ 182
Query: 453 L--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L +K+ R SNW PL+++Q YAA DA L I+ +
Sbjct: 183 LLKDKSIRCSNWSNFPLTEDQKLYAATDAYAGLIIYQKL 221
>gi|428316728|ref|YP_007114610.1| 3'-5' exonuclease [Oscillatoria nigro-viridis PCC 7112]
gi|428240408|gb|AFZ06194.1| 3'-5' exonuclease [Oscillatoria nigro-viridis PCC 7112]
Length = 430
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 82/160 (51%), Gaps = 13/160 (8%)
Query: 329 ICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASD---EMVFIFDLIKLAEDVPDVLD 385
I K++ +D E +Y +++ + ++ ++D + F+ D++ D P++
Sbjct: 14 IAKFYQAKILWVDTEIA-DYKSNPRLSLIQVLADSTDSTGDATFLLDVL----DKPELAK 68
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHSYGE-LECFKHYEMLLDIQN-VFKEPKGGLSG 443
+ +I+ +P I K+ +N DI+ L + + + C +M I + P L
Sbjct: 69 DFINQIMVNPDIEKVLHNASYDIRFLGNDDAQNVTC--TLQMTKKIPAYILPLPNRQLKT 126
Query: 444 LAEKILG-AGLNKTRRNSNWEQRPLSQNQLEYAALDAVVL 482
L E + G A ++KT ++ +W +RPL+Q QLEYA +DAV L
Sbjct: 127 LIETLCGIAYVDKTEQSGDWAKRPLTQKQLEYAKMDAVYL 166
>gi|74227079|dbj|BAE38334.1| unnamed protein product [Mus musculus]
Length = 789
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG D EW P Y G K ++V+++Q+ S+ ++F + ++ V L +L++
Sbjct: 72 VVGFDMEWPPIYKPG-KRSRVAVIQLCVSENKCYLFHISSMS-----VFPQGLKMLLENK 125
Query: 396 GILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDIQN--VFKEPKGGLSGLAEKILGAG 452
I K G + D +L + +LE F L D+ N + L+GL + +LG
Sbjct: 126 SIKKAGVGIEGDQWKLLRDFDVKLESFVE---LTDVANEKLKCAETWSLNGLVKHVLGKQ 182
Query: 453 L--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L +K+ R SNW PL+++Q YAA DA L I+ +
Sbjct: 183 LLKDKSIRCSNWSNFPLTEDQKLYAATDAYAGLIIYQKL 221
>gi|410612462|ref|ZP_11323540.1| 3'-5' exonuclease [Glaciecola psychrophila 170]
gi|410168004|dbj|GAC37429.1| 3'-5' exonuclease [Glaciecola psychrophila 170]
Length = 198
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
KA+ +E +G D E KP + KG +++Q+A++ F+F P + S
Sbjct: 34 KALKELETEVCLGFDTESKPIFRKGQTSPGPTLIQLATENKAFLF-----PTRFPFAVSS 88
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF-KEPKGGLSGLA 445
IL +P I K+G+ + D K+L H + ++ ++++++ E + G
Sbjct: 89 A-GAILCNPSIQKIGFGIKGDNKELRHKL-NINIVNTQDLSVELKHIVGDENQIGARAAV 146
Query: 446 EKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDA 479
+L L K + SNW Q PL ++Q+ YAA DA
Sbjct: 147 AMVLKYRLGKGAQKSNWGQYPLHEHQILYAANDA 180
>gi|126030364|pdb|2E6L|A Chain A, Structure Of Mouse Wrn Exonuclease Domain
gi|126030365|pdb|2E6M|A Chain A, Structure Of Mouse Werner Exonuclease Domain
Length = 208
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG D EW P Y G K ++V+++Q+ S+ ++F + ++ V L +L++
Sbjct: 42 VVGFDMEWPPIYKPG-KRSRVAVIQLCVSESKCYLFHISSMS-----VFPQGLKMLLENK 95
Query: 396 GILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDIQN--VFKEPKGGLSGLAEKILGAG 452
I K G + D +L + +LE F L D+ N + L+GL + +LG
Sbjct: 96 SIKKAGVGIEGDQWKLLRDFDVKLESFVE---LTDVANEKLKCAETWSLNGLVKHVLGKQ 152
Query: 453 L--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDV 498
L +K+ R SNW PL+++Q YAA DA L I+ + + V
Sbjct: 153 LLKDKSIRCSNWSNFPLTEDQKLYAATDAYAGLIIYQKLGNLGDTVQV 200
>gi|429739228|ref|ZP_19272989.1| 3'-5' exonuclease [Prevotella saccharolytica F0055]
gi|429157434|gb|EKY00031.1| 3'-5' exonuclease [Prevotella saccharolytica F0055]
Length = 212
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 86/169 (50%), Gaps = 19/169 (11%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
+A+ ++ ++GID E +P++ KG + +KVS++Q+A+ F+F L + +
Sbjct: 36 ERAVDYLLSSDILGIDTETRPSFRKG-ETHKVSLLQVATRTTCFLFRLNYIG------IT 88
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLA 445
+ R+L++ + +G + DI L FK M +D+QN+ + G+ L+
Sbjct: 89 PAILRLLENREVPMVGLSLHDDILSLRKRTE----FKP-GMFIDLQNIVGDI--GIEDLS 141
Query: 446 EKILGAGL-----NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
+ L A L +K +R +NW+ L+ Q YAALDA + ++ +
Sbjct: 142 LQKLYANLFHQKISKRQRLTNWDSDVLNDKQKVYAALDAWACINLYEEI 190
>gi|47210358|emb|CAF90237.1| unnamed protein product [Tetraodon nigroviridis]
Length = 624
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 7/154 (4%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
V+G+DCEW KG K + VS++Q+A+ + + ++ L +L+ P
Sbjct: 120 VLGLDCEWV--SAKG-KASSVSLLQMATYSGLCVLVRLQAFRSCQQPFPLSLAEVLRDPR 176
Query: 397 ILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDIQNVFKEPKG-GLSGLAEKILGAGLN 454
+ K+G D ++L YG L C L Q K G L LA +L L+
Sbjct: 177 VFKVGVGCYEDGRRLTRDYGLSLSCTVDLRYLALRQRDTKVNNGLSLKSLAADLLNVCLD 236
Query: 455 KTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
K+ R S+WE LS Q+ YAA DA V + +F
Sbjct: 237 KSLDVRCSDWEADQLSPEQVTYAARDAQVSVALF 270
>gi|399910265|ref|ZP_10778579.1| ribonuclease D [Halomonas sp. KM-1]
Length = 376
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 82/184 (44%), Gaps = 25/184 (13%)
Query: 312 VVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKV-SIMQIASDEMVFI 370
+ +I W+D + L A + G +V+ +D E + + + V +++Q +S ++
Sbjct: 3 LTPEIRWIDTPEALDAACAEVAGAEVIALDTE----FFREKTFHPVPALIQFSSGGPAWL 58
Query: 371 FDLIKLAEDVPDVLDSCLT--RILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLL 428
D V+ C R L G LKL + D++ LAH G L+
Sbjct: 59 VD---------PVVVHCTDAFRRLLGEGPLKLLHASSEDLEVLAHWAG-----VSVAPLV 104
Query: 429 DIQN----VFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQ 484
D Q + ++P G + G L K S+W QRPLS++Q YAALD V LL+
Sbjct: 105 DTQVAQALLGEDPAMGYQRMVHHWTGETLPKDETRSDWLQRPLSESQRLYAALDVVYLLK 164
Query: 485 IFHH 488
++
Sbjct: 165 VWER 168
>gi|146294019|ref|YP_001184443.1| 3'-5' exonuclease [Shewanella putrefaciens CN-32]
gi|145565709|gb|ABP76644.1| 3'-5' exonuclease [Shewanella putrefaciens CN-32]
Length = 298
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 76/147 (51%), Gaps = 9/147 (6%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
+V+G D E + ++ +G + + +S++QIA+ + ++F LAE + L +L+
Sbjct: 114 RVIGFDTETRASFERGVQ-HPLSLIQIATHDTCYLFQHALLAERL-----GLLKPVLEDE 167
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNK 455
ILK+G + D + L +G + ++ + + + G L +L ++K
Sbjct: 168 NILKVGVGLRSDGQALTREWG-INVTPRLDLNWVLAQLGAGKEMGTRQLVATLLQKRIDK 226
Query: 456 TRRN--SNWEQRPLSQNQLEYAALDAV 480
++ SNW+Q PL+ Q+ YAALDA+
Sbjct: 227 PKKVTLSNWQQVPLTSTQIVYAALDAL 253
>gi|423096745|ref|ZP_17084541.1| ribonuclease D [Pseudomonas fluorescens Q2-87]
gi|397886382|gb|EJL02865.1| ribonuclease D [Pseudomonas fluorescens Q2-87]
Length = 377
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI + ++ D
Sbjct: 4 DIHWIRDNDSLGQFCAEWQQLPFVALDTE----FMRVDTFYPIAGLLQIGDGKRAYLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + P L +L++P +LK+ + D++ L G L ++ L +
Sbjct: 60 LTIDNWQP------LAALLENPAVLKVLHACSEDLEVLLRLTGSLPA-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++LG L K S+W QRPLS Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLGIELPKGETRSDWLQRPLSDTQISYAAEDAVHLAEVFVQLRP 170
>gi|343426732|emb|CBQ70260.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 628
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 77/174 (44%), Gaps = 37/174 (21%)
Query: 334 GCKVVGIDCEWKPNY-VKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRIL 392
G +G+D EW N+ +G ++ +++QI S ++ I L ++ +P +L + IL
Sbjct: 199 GPGPMGLDLEW--NFSARGS--HRTALLQICSPSLILIIHLSAMSHRIPPLLKT----IL 250
Query: 393 QSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV--------FKEPKG----- 439
Q P ++K G + D +L Y +D +NV +P+
Sbjct: 251 QDPAVIKTGVAIRNDALKLQRDYA-----------IDTRNVVELSTLAKLAQPRRWAHTR 299
Query: 440 ---GLSGLAEKILGAGLNKTR-RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L L LG L K R S+WE+ PL +Q+EYAA D L++ V
Sbjct: 300 YLISLRDLTRVYLGRRLRKDGVRVSDWERFPLDAHQIEYAASDTFASLEVLRAV 353
>gi|242775502|ref|XP_002478657.1| 3'-5' exonuclease/helicase (Wrn), putative [Talaromyces stipitatus
ATCC 10500]
gi|218722276|gb|EED21694.1| 3'-5' exonuclease/helicase (Wrn), putative [Talaromyces stipitatus
ATCC 10500]
Length = 1028
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 87/182 (47%), Gaps = 25/182 (13%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKP--NYVKGCKMNKVSIMQIASDEMVFIFDL 373
+ + ++ +A +V+G D EW+P G K N VS++QIA++E + +F +
Sbjct: 773 VYYCKNLEQAERAAALFSASEVLGFDIEWRPQAQTTSGIKSN-VSLIQIANEERIGLFHI 831
Query: 374 IKL-AEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQN 432
++ D++ L ++L+S +K+G + + D ++ G + L ++ +
Sbjct: 832 ALFRGNEIHDLVPPSLRQLLESTTTVKVGVSIKADCSRVRRHLG-----INTRSLFELSH 886
Query: 433 VFKEPKGG-------------LSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAAL 477
++K K G L+ E++LG L K R S+W +PL Q++YAA
Sbjct: 887 LYKLVKYGTTQPKLVDRRTVNLAQQVEEVLGLPLKKDGDVRKSDW-TKPLDYAQVQYAAS 945
Query: 478 DA 479
DA
Sbjct: 946 DA 947
>gi|167555226|ref|NP_001107878.1| exonuclease 3'-5' domain-containing protein 2 [Danio rerio]
gi|166796362|gb|AAI59254.1| Zgc:175195 protein [Danio rerio]
Length = 617
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 102/212 (48%), Gaps = 21/212 (9%)
Query: 293 TREPEAGFVHSRFLHLKELVVEDIIWVD---EVDGLHKAICH-IEGCKVVGIDCEWKPNY 348
++EP A V + L L+ E + + + D L A+ + V+G+DCEW
Sbjct: 57 SQEPSAPPVSQKPLRAHTLLEEPPVVISSPQDWDNLWPALQKDLSMYPVLGLDCEWVKRV 116
Query: 349 ---VKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQ 405
VKG +++ VS++Q++S + L++L L L +L+ +LK+G
Sbjct: 117 RVSVKG-RVSAVSLLQLSSFTGRCV--LVRLLAFQNAQLPKSLIVLLRDQRVLKVGVGCY 173
Query: 406 CDIKQLAHSYG-ELEC---FKHYEMLLDIQNVFKEPKGGLS--GLAEKILGAGLNKT--R 457
D K+LA +G L C ++ + Q V GLS LAE +L L+K+
Sbjct: 174 EDGKRLAQDHGLTLSCTVDLRYLALRRSKQAVLT---NGLSLKSLAEDLLNVTLDKSVEL 230
Query: 458 RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
R S+WE LS Q+ YAA DA + + +F H+
Sbjct: 231 RCSDWEAEELSPEQITYAARDAQISIALFFHL 262
>gi|374855272|dbj|BAL58133.1| DNA polymerase I [uncultured Acidobacteria bacterium]
Length = 589
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
V+G+D E ++ ++QIA+ E +F+ DL L D+L +L+
Sbjct: 25 VLGVDTE---TTALDPYQGRIRLLQIATPEDIFVLDLFALGLQALDILRP----VLEGEQ 77
Query: 397 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK---EPKGGLSGLAEKILGAGL 453
+K+ +N + D K L H G +E + ++ +L Q V + GL+ +A++ L +
Sbjct: 78 PVKVLHNAKFDAKMLRHHAG-IELGRVFDTMLASQLVAAGDMTKRHGLADVAQRYLRERV 136
Query: 454 NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
K + S+W LS+ QLEYAA D +LL +
Sbjct: 137 EKAPQLSDWSGE-LSRGQLEYAARDVAILLPL 167
>gi|334116592|ref|ZP_08490684.1| 3'-5' exonuclease [Microcoleus vaginatus FGP-2]
gi|333461412|gb|EGK90017.1| 3'-5' exonuclease [Microcoleus vaginatus FGP-2]
Length = 431
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 37/172 (21%)
Query: 329 ICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEM---VFIFDLIKLAEDVPDVLD 385
I K++ +D E +Y +++ + ++ ++D F+ D++ D P++
Sbjct: 14 ITKFSQAKILWVDTEIA-DYKSNPRLSLIQVLADSTDSTGDGTFLLDVL----DKPELAK 68
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV------------ 433
+ +I+ +P I K+ +N DI+ L + D+QNV
Sbjct: 69 DFVNQIMVNPDIEKVFHNASYDIRFLGND--------------DVQNVTCTLKMARQIPY 114
Query: 434 --FKEPKGGLSGLAEKILG-AGLNKTRRNSNWEQRPLSQNQLEYAALDAVVL 482
P L L E + G A ++KT ++ +W +RPL+Q QLEYA +DAV L
Sbjct: 115 YILPLPNRQLKTLIETLCGIAYVDKTEQSGDWAKRPLTQKQLEYAKMDAVYL 166
>gi|403264513|ref|XP_003924522.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 1
[Saimiri boliviensis boliviensis]
Length = 621
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 94/192 (48%), Gaps = 13/192 (6%)
Query: 304 RFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIA 363
R L K + V D++ L ++ ++ V+GIDCEW ++G K + +S++Q+A
Sbjct: 73 RILKAKVVTVSQEAEWDQIQPLLRS--ELQDFPVLGIDCEWV--NLEG-KASPLSLLQMA 127
Query: 364 SDEMVFIFDLIKLAEDV--PDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGEL--E 419
S + + LI+L + + L L IL ILK+G D +L YG +
Sbjct: 128 SPSGLCV--LIRLPKLICGGKTLPRTLLDILADGTILKVGVGCSEDASKLLQDYGLVVRG 185
Query: 420 CFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAAL 477
C + + +N L LAE +L L+K+ R SNW+ L+++Q+ YAA
Sbjct: 186 CLDLRYLAMWQRNNLLSNGLSLKSLAETVLNFPLDKSLLLRCSNWDAETLTEDQVIYAAR 245
Query: 478 DAVVLLQIFHHV 489
DA + + +F H+
Sbjct: 246 DAQISVALFLHL 257
>gi|359477935|ref|XP_003632043.1| PREDICTED: LOW QUALITY PROTEIN: Werner Syndrome-like
exonuclease-like [Vitis vinifera]
Length = 331
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 10/162 (6%)
Query: 334 GCKVVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRIL 392
G ++G D EW+P + KG K ++MQI + ++ +I +P L S +L
Sbjct: 151 GQAILGFDIEWRPTFRKGVSQGKAAVMQICGGNSHCYVMHIIH--SGIPRNLXS----LL 204
Query: 393 QSPGILKLGYNFQCD-IKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGA 451
+ P +K+G D +K ++ + L + + K GL L E ++
Sbjct: 205 EDPTSIKVGVGIANDAVKVFKDHSVSVKDLEDLSYLANQKLGGDAKKWGLGSLTEMLISK 264
Query: 452 GLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
L K R NWE LS+ QLEYAA DA ++ ++S
Sbjct: 265 QLLKPNKIRLGNWEADVLSKAQLEYAATDAFASWYLYEVLKS 306
>gi|392420946|ref|YP_006457550.1| 3'-5' exonuclease [Pseudomonas stutzeri CCUG 29243]
gi|390983134|gb|AFM33127.1| 3'-5' exonuclease [Pseudomonas stutzeri CCUG 29243]
Length = 211
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 17/182 (9%)
Query: 311 LVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFI 370
L I+ D A+ I G +G D E KP + G + ++Q A+ ++
Sbjct: 24 LTSASIVTPATADEFRAAVEEIMGFACIGFDTESKPTFKVGEVSSGPHLIQFATPAKAYL 83
Query: 371 FDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDI 430
F + VP +++ + ILQ+P + K+G+ + D +L +G+L LLD+
Sbjct: 84 FRI-----GVPGCIEAA-SAILQAPALAKIGFGLKSDRSRL---HGKLGI--RPASLLDL 132
Query: 431 QNVF----KEPKGGLSGLAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQ 484
+V K+ + GL G +L A ++K+R SNW L+ Q YAA DA L+
Sbjct: 133 GSVLRYQGKKGQVGLRGAVAAVLDARIDKSRSVATSNWANPALTDAQQAYAANDAYAALR 192
Query: 485 IF 486
+F
Sbjct: 193 VF 194
>gi|261190752|ref|XP_002621785.1| 3'-5' exonuclease/helicase [Ajellomyces dermatitidis SLH14081]
gi|239591208|gb|EEQ73789.1| 3'-5' exonuclease/helicase [Ajellomyces dermatitidis SLH14081]
Length = 1112
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 13/169 (7%)
Query: 331 HIEGCKVVGIDCEWKPN-YVKGCKMNKVSIMQIASDEMVFIFDL--IKLAEDVPDVLDSC 387
H VVG+D EWK + ++ VS++Q+AS E + +F L A ++
Sbjct: 836 HFLSETVVGLDLEWKAQASTRDALVDNVSMIQLASKERIAVFHLALFNPANSPQHLVSPT 895
Query: 388 LTRILQSPGILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDIQNVFKEPK---GGLSG 443
L R+L+SP ++K+G + D +L G + L + PK L
Sbjct: 896 LKRLLESPELVKVGVAIRADCTRLYKFLGLQTTNLCEVSRLHKVVKHHLNPKLINKRLVN 955
Query: 444 LAEKI---LGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
LAE++ LG L+K R W ++ L+ Q++Y A D LQ+FH
Sbjct: 956 LAEQVEEHLGLPLDKDPEIRCGGWSKK-LNYRQVQYVATDPYAALQLFH 1003
>gi|119487547|ref|ZP_01621157.1| hypothetical protein L8106_26862 [Lyngbya sp. PCC 8106]
gi|119455716|gb|EAW36852.1| hypothetical protein L8106_26862 [Lyngbya sp. PCC 8106]
Length = 309
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 100/209 (47%), Gaps = 32/209 (15%)
Query: 323 DGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIM----QIASDEMVFIFDLIKLAE 378
+ + I + +++ +D E +Y +++ + ++ +I SD + ++FD++
Sbjct: 8 ESIQAVISQLSSAEILWLDTEVA-DYKNKPRLSLIQVLTTPNEIKSDHL-YLFDVL---- 61
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGE-LEC-------FKHYEMLLDI 430
D P++ + I+ +P I K+ +N D+K L + + C +Y LL +
Sbjct: 62 DQPELTTLFIEEIMANPAIEKVFHNANYDLKLLGKKQSKNVTCTLVMAKKIPYY--LLPV 119
Query: 431 QNVFKEPKGGLSGLAEKILG--AGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH- 487
P L LA + LG ++K ++S+W QRPL++ QLEYA +D V L QI
Sbjct: 120 ------PNYQLKTLATQ-LGDFTNIDKQEQSSDWGQRPLTEKQLEYAQMDVVYLAQIHQC 172
Query: 488 --HVRSCSQPTDVSEGHDKIEWKSYIVSH 514
++ + P +E +K+ + ++H
Sbjct: 173 LLKLQPLASPDPTTEDLNKLATRYQEIAH 201
>gi|70987206|ref|XP_749082.1| 3'-5' exonuclease/helicase (Wrn) [Aspergillus fumigatus Af293]
gi|66846712|gb|EAL87044.1| 3'-5' exonuclease/helicase (Wrn), putative [Aspergillus fumigatus
Af293]
gi|159123147|gb|EDP48267.1| 3'-5' exonuclease/helicase (Wrn), putative [Aspergillus fumigatus
A1163]
Length = 419
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 29/202 (14%)
Query: 337 VVGIDCEWKPNYVKGCKM-NKVSIMQIASDEMVFIFD--LIKLAEDVPDVLDSCLTRILQ 393
V+G D EWKP + + N VS++QIA+ E + +F L K A D + L +IL+
Sbjct: 190 VIGFDMEWKPQSSRSASIQNNVSLIQIANAERIALFQIALFKPARRPEDFISPSLRKILE 249
Query: 394 SPGILKLGYNFQCD--------------IKQLAHSYGELECFKHYEMLLDIQNVFKEPKG 439
S I K G + D I +L+H Y ++ + L++ ++V
Sbjct: 250 SSEITKAGVAIKADCTRLKNFLGINVRGIFELSHLYKLVKYCQSDPALINRRSV------ 303
Query: 440 GLSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV---RSCSQ 494
LS E+ G L K R +W L+ Q++YAA D+ L +F+ + R
Sbjct: 304 NLSEQVEEHFGLPLAKDDDVRCGDWTT-ALNYRQVQYAATDSYACLCLFNTMDAKRRALT 362
Query: 495 PTDVSEGHDKIEWKSYIVSHMD 516
PT H +++ +V +D
Sbjct: 363 PTPPLPAHAELDQPIRLVEDLD 384
>gi|325269880|ref|ZP_08136490.1| hypothetical protein HMPREF9141_1700 [Prevotella multiformis DSM
16608]
gi|324987853|gb|EGC19826.1| hypothetical protein HMPREF9141_1700 [Prevotella multiformis DSM
16608]
Length = 224
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 17/175 (9%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
KA+ ++ ++GID E +P + KG + +KV+++Q E+ F+F L L +PD
Sbjct: 37 KAVNYLLSRDIIGIDTETRPTFRKG-QHHKVALLQACDKEVCFLFRLNLLG--MPD---- 89
Query: 387 CLTRILQSPGILKLGYNFQCDIKQL----AHSYGELECFKHYEMLLDIQNVFKEPKGGLS 442
C+ R L+ + K+G + D+ L A G + Y L I+++ L
Sbjct: 90 CIKRFLEDTTVPKVGLSLGDDMLMLHQRSAFKPGYFIDLQDYVKSLGIEDM------SLQ 143
Query: 443 GLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
L + + K + SNWE + LS Q YA+ DA + ++ + D
Sbjct: 144 KLYANVFHERITKREQLSNWENQILSDKQKLYASTDAWTCINLYERLHELKHTGD 198
>gi|239614893|gb|EEQ91880.1| 3'-5' exonuclease/helicase [Ajellomyces dermatitidis ER-3]
Length = 1112
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 13/169 (7%)
Query: 331 HIEGCKVVGIDCEWKPN-YVKGCKMNKVSIMQIASDEMVFIFDL--IKLAEDVPDVLDSC 387
H VVG+D EWK + ++ VS++Q+AS E + +F L A ++
Sbjct: 836 HFLSETVVGLDLEWKAQASTRDALVDNVSMIQLASKERIAVFHLALFNPANSPQHLVSPT 895
Query: 388 LTRILQSPGILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDIQNVFKEPK---GGLSG 443
L R+L+SP ++K+G + D +L G + L + PK L
Sbjct: 896 LKRLLESPELVKVGVAIRADCTRLYKFLGLQTTNLCEVSRLHKVVKHHLNPKLINKRLVN 955
Query: 444 LAEKI---LGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
LAE++ LG L+K R W ++ L+ Q++Y A D LQ+FH
Sbjct: 956 LAEQVEEHLGLPLDKDPEIRCGGWSKK-LNYRQVQYVATDPYAALQLFH 1003
>gi|294673634|ref|YP_003574250.1| 3'-5' exonuclease [Prevotella ruminicola 23]
gi|294472246|gb|ADE81635.1| 3'-5' exonuclease [Prevotella ruminicola 23]
Length = 217
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 86/174 (49%), Gaps = 15/174 (8%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
+A+ ++ V+G D E +P++ KG +K S++Q+++ F+F L + L
Sbjct: 37 RAVDYLLAQPVLGFDTETRPSFKKGVH-HKCSLLQVSTSNCCFLFRLNHIG------LCP 89
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE---PKGGLSG 443
+ R+L + K+G ++ D L H G+ E + +D+Q++ ++ L+
Sbjct: 90 AVKRLLADNTVTKVGLAWRNDALGL-HQLGDFEMGE----FVDLQDMARKIGIEDQSLAK 144
Query: 444 LAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
L + G ++K + +NWE+ L +Q YAA DA +Q+++ + + D
Sbjct: 145 LYANVFGERISKREQLTNWERDVLDDHQKRYAATDAWACVQLYNEFKRMIENND 198
>gi|428204663|ref|YP_007083252.1| ribonuclease D [Pleurocapsa sp. PCC 7327]
gi|427982095|gb|AFY79695.1| ribonuclease D [Pleurocapsa sp. PCC 7327]
Length = 306
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 83/169 (49%), Gaps = 12/169 (7%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASD---EMVFIFDLI 374
++ E D + +AI + K++ ID E K +++ V ++ +D + V I D++
Sbjct: 3 YLTEPDRISQAIANYAQAKILWIDTEIADYQSKKPRLSLVQVLDDPTDVKGDRVAILDVL 62
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGE-LECFKHYEMLLDIQN- 432
D ++D + +I+ +P I K+ +N D + L S + C EM I
Sbjct: 63 ----DRTQLIDEFIDKIMANPAIEKVFHNASFDCRFLGRSRARNVTC--TLEMAQKIPYY 116
Query: 433 VFKEPKGGLSGLAEKILG-AGLNKTRRNSNWEQRPLSQNQLEYAALDAV 480
+ L+ LAE++ + +NKT + +W RPL++ QLEYA +D V
Sbjct: 117 ILPLSNYKLATLAEQLCHFSKVNKTEQGGDWSLRPLTEQQLEYAKMDVV 165
>gi|238484333|ref|XP_002373405.1| exosome complex exonuclease Rrp6, putative [Aspergillus flavus
NRRL3357]
gi|220701455|gb|EED57793.1| exosome complex exonuclease Rrp6, putative [Aspergillus flavus
NRRL3357]
Length = 434
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 95/220 (43%), Gaps = 16/220 (7%)
Query: 276 EKVDELCERYSLEGFLKT-REPEAGFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEG 334
EK E +R E ++ R PE+ + S + + +VD ++G+ + + ++
Sbjct: 179 EKSVESSDRNPYETEIRAARYPESTYAVSSPVPYQPWESTTATFVDTLEGVKEMLEELKS 238
Query: 335 CKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK-LAEDVPDVLDSCLTRILQ 393
K + ID E ++ VS+MQI++ + ++ D +K E++ L +
Sbjct: 239 AKEIAIDLE---HHDVHSYQGLVSLMQISTRDKDWVVDTLKPWREEL-----QMLNEVFA 290
Query: 394 SPGILKLGYNFQCDIKQLAHSYG--ELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGA 451
P ILK+ + DI L G + F Y PK L L +K +
Sbjct: 291 DPSILKVFHGSSMDIIWLQRDLGLYVVGMFDTYHAAC----ALNYPKRSLKFLLQKFVNF 346
Query: 452 GLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
+K + ++W RP+ + +YA D LL IF H+R+
Sbjct: 347 EADKRYQMADWRIRPIPEGMFDYARSDTHYLLHIFDHLRN 386
>gi|406878482|gb|EKD27373.1| 3'-5' exonuclease [uncultured bacterium]
Length = 342
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 9/161 (5%)
Query: 331 HIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTR 390
+I+ ++G D E KP++ KG + N +S++QI++ IF + K + + L
Sbjct: 37 YIKNQPILGFDTESKPSFKKG-ENNPISLIQISTRTHACIFKIDK------EGITKGLKD 89
Query: 391 ILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILG 450
IL+ ILK+G ++K+L +G + + + I L LA L
Sbjct: 90 ILEDEKILKIGQEPSYELKKLNTEHGLTP--RGFADICKIAAFCNCTPRTLKALAAIFLQ 147
Query: 451 AGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
++K + SNW + L++ Q+ YAA DA V L+++ ++S
Sbjct: 148 IRISKQEQTSNWNRPKLTEKQVLYAATDAWVTLEVYLKMKS 188
>gi|363750290|ref|XP_003645362.1| hypothetical protein Ecym_3030 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888996|gb|AET38545.1| Hypothetical protein Ecym_3030 [Eremothecium cymbalariae
DBVPG#7215]
Length = 747
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 20/181 (11%)
Query: 317 IWVDEVDGLHKAICHIEGCKVVGIDCE---WKPNYVKGCKMNKVSIMQIASDEMVFIFDL 373
IWVD + L+ + ++ K + +D E ++ Y C +MQI++ E ++ D
Sbjct: 216 IWVDNITALNDMLNGLKNVKEIAVDLEHHDYRSYYGLVC------LMQISTRESDWLVDT 269
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYG--ELECFKHYEMLLDIQ 431
I L +D+ L I P ILK+ + DI L G + F Y
Sbjct: 270 IALRQDL-----QVLNEIFTDPSILKVFHGAFMDIIWLQRDLGLYVVSLFDTYHA----S 320
Query: 432 NVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
PK L+ L E +K + ++W RPLS+ YA D LL I+ +R+
Sbjct: 321 RALGFPKHSLAYLLETFANFKTSKKYQLADWRIRPLSKPMKTYARADTHFLLNIYDKLRN 380
Query: 492 C 492
Sbjct: 381 S 381
>gi|327352334|gb|EGE81191.1| 3'-5' exonuclease/helicase [Ajellomyces dermatitidis ATCC 18188]
Length = 1064
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 13/169 (7%)
Query: 331 HIEGCKVVGIDCEWKPN-YVKGCKMNKVSIMQIASDEMVFIFDL--IKLAEDVPDVLDSC 387
H VVG+D EWK + ++ VS++Q+AS E + +F L A ++
Sbjct: 836 HFLSETVVGLDLEWKAQASTRDALVDNVSMIQLASKERIAVFHLALFNPANSPQHLVSPT 895
Query: 388 LTRILQSPGILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDIQNVFKEPK---GGLSG 443
L R+L+SP ++K+G + D +L G + L + PK L
Sbjct: 896 LKRLLESPELVKVGVAIRADCTRLYKFLGLQTTNLCEVSRLHKVVKHHLNPKLINKRLVN 955
Query: 444 LAEKI---LGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
LAE++ LG L+K R W ++ L+ Q++Y A D LQ+FH
Sbjct: 956 LAEQVEEHLGLPLDKDPEIRCGGWSKK-LNYRQVQYVATDPYAALQLFH 1003
>gi|330808098|ref|YP_004352560.1| ribonuclease D [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|423695883|ref|ZP_17670373.1| ribonuclease D [Pseudomonas fluorescens Q8r1-96]
gi|327376206|gb|AEA67556.1| ribonuclease D [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|388009164|gb|EIK70415.1| ribonuclease D [Pseudomonas fluorescens Q8r1-96]
Length = 377
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI + ++ D
Sbjct: 4 DIHWIRDNDSLGQFCAEWQQLPFVALDTE----FMRVDTFYPIAGLLQIGDGKRAYLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + P L +L++P +LK+ + D++ L G L ++ L +
Sbjct: 60 LTIDNWQP------LAALLENPAVLKVLHACSEDLEVLLRLTGSLPA-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++LG L K S+W QRPLS+ Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLGIELPKGETRSDWLQRPLSETQISYAAEDAVHLAEVFVLLRP 170
>gi|226502476|ref|NP_001149685.1| Werner syndrome ATP-dependent helicase [Zea mays]
gi|195629436|gb|ACG36359.1| Werner syndrome ATP-dependent helicase [Zea mays]
gi|414880611|tpg|DAA57742.1| TPA: werner syndrome ATP-dependent helicase [Zea mays]
Length = 204
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 11/153 (7%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
+ G+D EW+P V G V+++QI D +F +++ A+ +PD L+R L
Sbjct: 50 IAGLDVEWRPARVPGPV--PVAVLQICVDHRCLVFQILQ-ADYIPD----ALSRFLADRR 102
Query: 397 ILKLGYNFQCDIKQLAHSY--GELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLN 454
+G D+ +L Y G + D V + + GL L +++G +
Sbjct: 103 FTFVGVGISGDVAKLRAGYRLGVASAVDLRVLAADTLEVPELLRAGLQTLVWEVMGVQMV 162
Query: 455 KTR--RNSNWEQRPLSQNQLEYAALDAVVLLQI 485
K R S W+ LS++QL+YA DA ++
Sbjct: 163 KPHHVRVSAWDTPTLSEDQLKYACADAFASFEV 195
>gi|224129176|ref|XP_002328909.1| predicted protein [Populus trichocarpa]
gi|222839339|gb|EEE77676.1| predicted protein [Populus trichocarpa]
Length = 323
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 14/174 (8%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
++G D EWKP++ G K ++MQI A+ + + + + L +L+
Sbjct: 151 IIGFDIEWKPSFTTGVLPGKAAVMQICANTSLCHVMHIFHSG------ITPSLQFLLEDS 204
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEML--LDIQNVFKEPKG-GLSGLAEKILGAG 452
++K+G D ++ Y K E L L Q + +PK GL LA+ ++
Sbjct: 205 KLVKVGIGIGGDCAKVFRDYNA--SVKSVEDLSYLANQKLDGKPKTWGLQALAKILVCKE 262
Query: 453 LNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSEGHDK 504
L K R NW+ LS+ QL+YAA DA Q++ ++S D ++ K
Sbjct: 263 LQKPNKIRLGNWQVDVLSKEQLQYAATDAFASWQLYQVLKSLPDAKDATDSTSK 316
>gi|405355820|ref|ZP_11024932.1| Ribonuclease D [Chondromyces apiculatus DSM 436]
gi|397091092|gb|EJJ21919.1| Ribonuclease D [Myxococcus sp. (contaminant ex DSM 436)]
Length = 378
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 17/183 (9%)
Query: 321 EVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV 380
+ +G +A +E + + +D E + ++ +Q+A+D VF+ D ++
Sbjct: 2 DAEGEERATRQLEQAREIAVDLEADSMHAFRARL---CFLQLATDAEVFLLDTLQ----- 53
Query: 381 PDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQ---NVFKEP 437
P V+ L ++ P K + Q D++ LA E + L D + P
Sbjct: 54 PGVVPDMLAPLMADPARTKFFHAAQGDLQFLA------EVGVRVQGLFDTHRAATLLGWP 107
Query: 438 KGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
K GL+ LA + LG L K + S++ RPL EY A D L ++ VR + D
Sbjct: 108 KVGLADLARERLGVELPKEHQQSDFSIRPLPPGMREYIANDVRYLCELGRQVRDACREAD 167
Query: 498 VSE 500
+ E
Sbjct: 168 ILE 170
>gi|296215361|ref|XP_002807292.1| PREDICTED: LOW QUALITY PROTEIN: exonuclease 3'-5' domain-containing
protein 2 [Callithrix jacchus]
Length = 621
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 19/195 (9%)
Query: 304 RFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIA 363
R L K + V D+++ L ++ ++ V+GIDCEW ++G + + +S++Q+A
Sbjct: 73 RILKAKVVTVSQEAEWDQIEPLLRS--ELQDFPVLGIDCEWV--NLEG-RASPLSLLQMA 127
Query: 364 SDEMVFIFDLIKLAEDV--PDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGEL--E 419
S + + LI+L + + L L IL ILK+G D +L YG +
Sbjct: 128 SPSGLCV--LIRLPKLICGGKTLPRTLLDILADGTILKVGVGCSEDASKLLQDYGLVVRG 185
Query: 420 CFK-HYEMLLDIQNVFKEPKGGLS--GLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEY 474
C Y + +N+ GLS LAE +L L+K+ R SNW+ L+++Q+ Y
Sbjct: 186 CLDLRYLAMWQRKNLLS---NGLSLKSLAETVLNFSLDKSLVLRCSNWDAETLTEDQVIY 242
Query: 475 AALDAVVLLQIFHHV 489
AA DA + + +F H+
Sbjct: 243 AARDAQISVALFLHL 257
>gi|378949376|ref|YP_005206864.1| ribonuclease D [Pseudomonas fluorescens F113]
gi|359759390|gb|AEV61469.1| Ribonuclease D [Pseudomonas fluorescens F113]
Length = 377
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI + ++ D
Sbjct: 4 DIHWIRDNDSLGQFCAEWQQLPFVALDTE----FMRVDTFYPIAGLLQIGDGKRAYLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + P L +L++P +LK+ + D++ L G L ++ L +
Sbjct: 60 LTIDNWQP------LAALLENPAVLKVLHACSEDLEVLLRLTGSLPA-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++LG L K S+W QRPLS+ Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLGIELPKGETRSDWLQRPLSETQISYAAEDAVHLAEVFVLLRP 170
>gi|49118127|gb|AAH73087.1| FFA-1 protein [Xenopus laevis]
Length = 1434
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 87/182 (47%), Gaps = 21/182 (11%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
V+G D EW P Y KG K KV+++Q+ S++ ++F + +A L R+L+
Sbjct: 72 VLGFDIEWPPVYTKG-KTGKVALIQVCVSEKKCYLFHISPMAG-----FPKGLKRLLEDE 125
Query: 396 GILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLN 454
+ K+G + D +L Y +L+ F + + + KE K L+GL + + L
Sbjct: 126 SVRKVGVGIEGDQWKLMSDYELKLKGFIELSEMANQKLRCKE-KWSLNGLIKHLFKEQLI 184
Query: 455 K--TRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSEGHDKIEWKSYIV 512
K + R SNW+ PL+++Q YAA DA L I+ + EG D E S+ V
Sbjct: 185 KESSVRCSNWDIFPLTEDQKLYAATDAYAGLLIYKKL----------EGMDAHESDSFRV 234
Query: 513 SH 514
Sbjct: 235 GR 236
>gi|77457615|ref|YP_347120.1| ribonuclease D [Pseudomonas fluorescens Pf0-1]
gi|398979427|ref|ZP_10688437.1| ribonuclease D [Pseudomonas sp. GM25]
gi|77381618|gb|ABA73131.1| putative ribonuclease [Pseudomonas fluorescens Pf0-1]
gi|398135857|gb|EJM24962.1| ribonuclease D [Pseudomonas sp. GM25]
Length = 377
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++Q+ + ++ D
Sbjct: 4 DIHWIRDNDSLAQFCAEWQQLPFVALDTE----FMRVDTFYPIAGLLQVGDGKRAYLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + P L +L++P +LK+ + D++ L G L ++ L +
Sbjct: 60 LTINAWQP------LAALLENPAVLKVLHACSEDLEVLLRLTGSLPA-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++LG L K S+W QRPLS Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLGIELPKGETRSDWLQRPLSDTQISYAAEDAVHLAEVFVQLRP 170
>gi|408791723|ref|ZP_11203333.1| 3'-5' exonuclease [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408463133|gb|EKJ86858.1| 3'-5' exonuclease [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 406
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 11/172 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
+ I VD L A+ ++ K++ ID E Y KV ++QI S+ ++ D +
Sbjct: 6 NYILVDTAKALDLALINLRQSKIMSIDTESSGYY---TYYPKVCLIQINSNGKNYLIDPL 62
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF 434
K+ S L + + ILK+ ++ Q DIK L +G E + ++ + +
Sbjct: 63 KITNL------SALGPLFKDENILKIFHSAQDDIKALKRDFG-FEFVNTADTMISSRLLS 115
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
E + LS + E L+K + SNWE RPL + QL+YAALD L I+
Sbjct: 116 LE-QSSLSHVVEHYHKVTLSKVEQKSNWEIRPLQKQQLKYAALDTAYLESIW 166
>gi|418715523|ref|ZP_13275644.1| 3'-5' exonuclease [Leptospira interrogans str. UI 08452]
gi|418727334|ref|ZP_13285929.1| 3'-5' exonuclease [Leptospira interrogans str. UI 12621]
gi|409959575|gb|EKO23345.1| 3'-5' exonuclease [Leptospira interrogans str. UI 12621]
gi|410788424|gb|EKR82142.1| 3'-5' exonuclease [Leptospira interrogans str. UI 08452]
Length = 388
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
D I VD L + ++ + +D E Y +KV ++QI++ +I D +
Sbjct: 6 DYIVVDTARSLQLVLINLSQADSISVDTESSGYY---TYFSKVCLIQISAKGKNYIIDPL 62
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDI---Q 431
KL L++ L + + ILK+ ++ DIK L +G ++ + D
Sbjct: 63 KLQN-----LEN-LGNLFEDKKILKIFHSAIDDIKALKKDFG-----FQFQNIADTGFSS 111
Query: 432 NVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
+ + L+ L + L+K + SNWE+RPL ++QL+YAALD V L I+ ++
Sbjct: 112 RLLDHEQYSLTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLETIWEKMK 170
>gi|159464517|ref|XP_001690488.1| hypothetical protein CHLREDRAFT_188311 [Chlamydomonas reinhardtii]
gi|158279988|gb|EDP05747.1| predicted protein [Chlamydomonas reinhardtii]
Length = 162
Score = 56.2 bits (134), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAE-DVPDV----------- 383
+VV IDCEW P + + VSI+Q+ + + ++I DL++L D P
Sbjct: 44 QVVAIDCEWAP-FERNQPKTPVSILQVGTRDRIYIVDLLQLLRPDSPAAAADDGKRGGGR 102
Query: 384 --LDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFK 422
+ L+ +L SP ++ +G+ Q D+ +L SY L CF+
Sbjct: 103 AAVSDFLSAVLCSPRVVVVGFQLQSDLDRLQESYPHLPCFQ 143
>gi|84995770|ref|XP_952607.1| DNA binding protein [Theileria annulata strain Ankara]
gi|65302768|emb|CAI74875.1| DNA binding protein, putative [Theileria annulata]
Length = 247
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 336 KVVGIDCEWKPNYVKGC----KMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRI 391
K++G D E+ P+Y K K SI+QI D FI+ + K+ +P+ +
Sbjct: 80 KLLGFDLEYVPDYYSNLDYSYKRCKPSIVQICGDSTCFIYLIYKIGY-IPN------KGM 132
Query: 392 LQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGA 451
+ IL++ + D++ L YG +C ++ L D+ + L E +L
Sbjct: 133 FITSFILQVSHGAPSDMRLLFKHYGT-KC-TNFVDLKDLCKDYNIYPASLKNATESVLNL 190
Query: 452 GLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
LNK ++ SNWE L +Q+ YA+ DA V +IF
Sbjct: 191 KLNKKQQCSNWEADKLVPDQISYASTDAWVTREIF 225
>gi|346325283|gb|EGX94880.1| 3'-5' exonuclease/helicase (Wrn), putative [Cordyceps militaris
CM01]
Length = 451
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 22/169 (13%)
Query: 337 VVGIDCEWKPNYVK---GCKMNKVSIMQIASDEMVFIFD--LIKLAEDVPDVLDSCLTRI 391
V+G D EW Y + G + N VS++QIAS + +F L D D++ +
Sbjct: 86 VLGFDLEWL-AYARRGDGPRAN-VSLIQIASPSRIGLFHVALFPRDNDDGDLVAPAFRAL 143
Query: 392 LQSPGILKLGYNFQCDIKQL-----AHSYGELECFKHYEML---LDIQN---VFKEPKGG 440
++ P +LK+G + Q D +L + G LE Y+++ D Q + K P
Sbjct: 144 VEDPAVLKVGVHIQADCTRLRTFLGVAARGVLELSHLYKLVKYARDAQRRKLINKVPVA- 202
Query: 441 LSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
L+ +++L L K + R+SNW PL+ QL Y+A DA LQ++H
Sbjct: 203 LATQVQEVLKLPLFKGQSVRSSNWSI-PLTSKQLTYSAADAYAGLQLYH 250
>gi|294056543|ref|YP_003550201.1| 3'-5' exonuclease [Coraliomargarita akajimensis DSM 45221]
gi|293615876|gb|ADE56031.1| 3'-5' exonuclease [Coraliomargarita akajimensis DSM 45221]
Length = 211
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 13/170 (7%)
Query: 319 VDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAE 378
++ ++ + + + +G D E +P + KG + +++Q+A+ + V++F + K
Sbjct: 37 LNTIEEMEAVVPQLLKSSHLGFDTETRPTFKKG-EYYPPALIQLATADCVYLFRISKSET 95
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK--E 436
P L IL+SP ILK G + D+++L +E F+ L + K
Sbjct: 96 LQP------LKAILESPQILKTGIGIKEDVRELRA----MEDFQPSGFLEITELTLKLGY 145
Query: 437 PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
GL L +L ++K + SNW ++ L Q Q+ YAA DA V +++
Sbjct: 146 ENRGLRPLTGLLLNGRISKAAQVSNWARQELDQKQIRYAATDAWVSRELY 195
>gi|2645409|gb|AAB87366.1| homolog of human Werners syndrome protein [Mus musculus]
Length = 643
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 79/159 (49%), Gaps = 15/159 (9%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG D EW P Y G K ++V+++Q+ S+ ++F + ++ V L +L++
Sbjct: 72 VVGFDMEWPPIYKPG-KRSRVAVIQLCVSENKCYLFHISSMS-----VFPQGLKMLLENK 125
Query: 396 GILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDIQN--VFKEPKGGLSGLAEKILGAG 452
I K G + D +L + +LE F L D+ N + L+GL + +LG
Sbjct: 126 SIKKAGVGIEGDQWKLLRDFDVKLESFVE---LTDVANEKLKCAETWSLNGLVKHVLGKQ 182
Query: 453 L--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L +K+ R SNW PL+++Q YAA DA I+ +
Sbjct: 183 LLKDKSIRCSNWSNFPLTEDQKLYAATDAYAGFIIYRKI 221
>gi|331005546|ref|ZP_08328920.1| Ribonuclease D [gamma proteobacterium IMCC1989]
gi|330420648|gb|EGG94940.1| Ribonuclease D [gamma proteobacterium IMCC1989]
Length = 383
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 25/140 (17%)
Query: 357 VSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYG 416
+ ++QIA + V++ D + +++ P + +LQ+P I+K+ + D++ +++G
Sbjct: 56 IGLLQIADENGVYLIDPLAISDTQP------MADVLQNPAIVKVVHACSEDLEVFQYAFG 109
Query: 417 ELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGL---------NKTRRNSNWEQRPL 467
L E L D Q G +G I A L K S+W QRPL
Sbjct: 110 VLP-----ESLFDTQVA-----AGFAGYGSSIGYANLLREIKRIDIPKQETRSDWLQRPL 159
Query: 468 SQNQLEYAALDAVVLLQIFH 487
S QL YAALD LL+I+
Sbjct: 160 SDAQLRYAALDVEYLLEIYR 179
>gi|224139642|ref|XP_002323207.1| predicted protein [Populus trichocarpa]
gi|222867837|gb|EEF04968.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 19/158 (12%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
+VG+D EW+PN + + N V+ +Q+++ IF L+ +P L L+ + +
Sbjct: 61 IVGLDVEWRPNRFRRIE-NPVATLQLSAGNDCLIFQLLHCPTGIPQSLHDFLSDMTYT-- 117
Query: 397 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKG-------GLSGLAEKIL 449
+G + D+K+L Y EL +D++ + E G G+ LA ++L
Sbjct: 118 --FVGVGIEGDVKKLTEDY-ELSVGN----AVDLRGLAAEKLGDSRWKNSGVKRLAREVL 170
Query: 450 GAGLNKTRRN--SNWEQRPLSQNQLEYAALDAVVLLQI 485
G + K +R S W+ L+ Q++YA LDA + +I
Sbjct: 171 GKEIEKPKRITLSRWDNPWLTPAQVQYACLDAFLSCKI 208
>gi|410633405|ref|ZP_11344051.1| 3'-5' exonuclease [Glaciecola arctica BSs20135]
gi|410147120|dbj|GAC20918.1| 3'-5' exonuclease [Glaciecola arctica BSs20135]
Length = 199
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 12/167 (7%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
DII E+D ++ A+ +E +G D E KP + KG +++Q+A+ F+F
Sbjct: 24 DIIET-ELDAVN-ALKELETEICLGFDTESKPIFRKGQTSPGPTLIQLATATKAFLF--- 78
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF 434
P + S IL +P I K+G+ + D K+L + ++ ++ ++++N+
Sbjct: 79 --PTKFPFAI-STAKAILCNPNIQKVGFGLKGDKKELRNKL-SIDIANTQDLSVELKNLV 134
Query: 435 --KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDA 479
K+ G + +A +L + L K + SNW Q PL Q+Q+ YAA DA
Sbjct: 135 GDKDLIGARAAVA-MVLKSRLGKGAQRSNWAQYPLQQHQILYAANDA 180
>gi|417767687|ref|ZP_12415623.1| 3'-5' exonuclease [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|400349705|gb|EJP01993.1| 3'-5' exonuclease [Leptospira interrogans serovar Bulgarica str.
Mallika]
Length = 388
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 17/179 (9%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
D I VD L + ++ + +D E Y +KV ++QI++ +I D +
Sbjct: 6 DYIVVDTARSLQLVLINLSQADSISVDTESSGYY---TYFSKVCLIQISAKGKNYIIDPL 62
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDI---Q 431
KL L+S L + + ILK+ ++ DIK L +G ++ + D
Sbjct: 63 KLQN-----LES-LGNLFEDKKILKIFHSAIDDIKALKKDFG-----FQFQNIADTGFSS 111
Query: 432 NVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
+ + L+ L + L+K + SNWE+RPL ++Q +YAALD V L I+ ++
Sbjct: 112 RLLDHEQYSLTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQFQYAALDTVYLETIWEKMK 170
>gi|89267461|emb|CAJ83573.1| Werner syndrome homolog (human) [Xenopus (Silurana) tropicalis]
Length = 1171
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 88/176 (50%), Gaps = 20/176 (11%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
V+G D EW P Y KG K KV+++Q+ S++ ++F + +A L R+L+
Sbjct: 72 VLGFDIEWPPIYTKG-KTGKVALIQVCVSEKKCYLFHISPMAG-----FPKGLRRLLEDE 125
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQN--VFKEPKGGLSGLAEKILGAGL 453
+ K+G + D +L Y EL+ K + L ++ N + + K L+GL + + L
Sbjct: 126 SVKKVGVGIEGDQWKLMSDY-ELK-LKGFIELSEVANQKLRCKEKWSLNGLVKHLFKKQL 183
Query: 454 --NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSEGHDKIEW 507
+ + R SNW+ PLS +Q YAA DA L I+ Q + + H+K+ +
Sbjct: 184 LKDSSIRCSNWDIFPLSTDQKLYAASDAYAGLLIY-------QKLECMDAHEKVSF 232
>gi|197122666|ref|YP_002134617.1| 3'-5' exonuclease [Anaeromyxobacter sp. K]
gi|196172515|gb|ACG73488.1| 3'-5' exonuclease [Anaeromyxobacter sp. K]
Length = 288
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 84/170 (49%), Gaps = 13/170 (7%)
Query: 317 IWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKL 376
++V + D L + + + G +V+ +D E +V +V ++Q+++ F+ D I +
Sbjct: 10 VFVSDPDALSRLLDALAGERVLALDTESNSFHVY---RERVCLLQLSTRAQDFVVDPISV 66
Query: 377 AEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE 436
DV L IL G + + D++ L YG + ++ ++ + + +
Sbjct: 67 -----DV--RPLGEILCD-GREVVLHGADYDVRCLHREYG-WRIPRLFDTMIAARRLGR- 116
Query: 437 PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
P GLS L E G L+K + S+W +RPL+ +QL YAALD LL +F
Sbjct: 117 PGLGLSALVEAHFGVRLSKAFQRSDWGRRPLTPDQLAYAALDTHFLLPLF 166
>gi|332240842|ref|XP_003269596.1| PREDICTED: Werner syndrome ATP-dependent helicase [Nomascus
leucogenys]
Length = 1433
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 82/160 (51%), Gaps = 17/160 (10%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG D EW P Y KG K+ KV+++Q+ S+ ++F + ++ V L +L++
Sbjct: 78 VVGFDMEWPPLYNKG-KLGKVALIQLCVSESKCYLFHISSMS-----VFPQGLKMLLENK 131
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPK----GGLSGLAEKILGA 451
+ K G + D +L + K++ L D+ N K+ K L+ L + +LG
Sbjct: 132 AVKKAGVGIEGDQWKLLRDFDIK--LKNFVELTDVAN--KKLKCTETWSLNSLVKHLLGK 187
Query: 452 GL--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L +K+ R SNW + PL+++Q YAA DA I+ ++
Sbjct: 188 QLLKDKSIRCSNWSKFPLTEDQKLYAATDAYAGFIIYRNL 227
>gi|298245785|ref|ZP_06969591.1| 3'-5' exonuclease [Ktedonobacter racemifer DSM 44963]
gi|297553266|gb|EFH87131.1| 3'-5' exonuclease [Ktedonobacter racemifer DSM 44963]
Length = 402
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 86/177 (48%), Gaps = 17/177 (9%)
Query: 317 IWVDEVDGLHKAICHIEGCKVVGIDCEWK-----PNYVKGCKMNKVSIMQIASDEMVFIF 371
+W++ + L A+ ++ VV ID E+ G + +++++Q+A ++ F+
Sbjct: 37 LWIENSEQLLHAVELLKQSPVVAIDAEFTQVRSLSAESNGSTVPRLALLQLAIEKQCFVV 96
Query: 372 DLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECF--KHYEMLLD 429
D ++L + P L ++ P ++ L + D++ +A E F +Y++
Sbjct: 97 DTLRLKDLSP------LNTVVSDPDVIVLLHGAGADLRVMA----ERGVFVAHYYDLEAT 146
Query: 430 IQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
++VF + + L+ + + L+K+ + ++W +RPL + YAA DA L ++
Sbjct: 147 SRSVFGQHESSLAAMLWRAFHMRLDKSLQRTDWTRRPLPPAMVAYAARDAEATLALY 203
>gi|344273945|ref|XP_003408779.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Loxodonta africana]
Length = 619
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 102/213 (47%), Gaps = 30/213 (14%)
Query: 296 PEAGFVHS---------RFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKP 346
PEA +HS R L K + V D+ + L K+ +E V+G DCEW
Sbjct: 54 PEAVRLHSSAPRASWEERILQAKVVTVSQEEEWDQTEPLLKS--ELEDFPVLGFDCEWV- 110
Query: 347 NYVKGCKMNKVSIMQIASDE-MVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQ 405
++G +++ +S++Q+AS + + L KL L L IL ILK+G
Sbjct: 111 -NLEG-RVSPLSLLQMASPSGLCVLLRLPKLIRGG-KTLPRTLLDILADGNILKVGVGCS 167
Query: 406 CDIKQLAHSYGELECFKHYEMLLDIQNVFKEPK-----GGLS--GLAEKILGAGLNKTR- 457
D +L YG + K Y LD++ + + GLS LAE +L L+K+
Sbjct: 168 EDASKLLEDYGLV--VKGY---LDLRYLAMRQRDSLLCNGLSLKSLAETVLNFPLDKSLL 222
Query: 458 -RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
R SNW+ L+++Q+ YAA DA + + +F H+
Sbjct: 223 LRCSNWDAENLTEDQVIYAARDAQISVALFLHL 255
>gi|159487409|ref|XP_001701715.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280934|gb|EDP06690.1| predicted protein [Chlamydomonas reinhardtii]
Length = 795
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 78/369 (21%), Positives = 133/369 (36%), Gaps = 88/369 (23%)
Query: 184 YIFAMIDSQSYMTAVSLLEHFSIRQSGESFLLKMIQNKEFKAAEKWATFMGKPILLKRLA 243
Y+ ID+ +A FS+RQ I+ + +++ L RLA
Sbjct: 59 YVQICIDADRLKSAARATRLFSLRQE-----FPDIEARYRRSS------------LARLA 101
Query: 244 EKACWDIAEAKTKGDKRLLEYLVYLAMEAGYSEKVDELCERYSLEGFLKTR--EPEAGFV 301
K W +A A D L L+ +EAG +E +R+ L L +PEA
Sbjct: 102 SKRVWGVAAAFVGTDAELQTELLRAMVEAGEGGLAEEYRKRFGLPPALMAALIDPEALAA 161
Query: 302 HS-----RFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNK 356
++L L L + +IW D
Sbjct: 162 QEAARAAKYLPLA-LPSDRVIWADG-------------------------PEGLAAAAEA 195
Query: 357 VSIMQIASDEMVFIFDLIKL---------------------------AEDVPDVLDSCLT 389
++ Q+A+ + +FDLI L + VL +
Sbjct: 196 LAGAQVATADWAVLFDLIALCGPGSSSSAAAAPGGEQEAAAADATAATTPLDAVLLPLFS 255
Query: 390 RILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKIL 449
R G L LG+ D+ +L+ SY + F+ LD+ +++ ++
Sbjct: 256 RTPAEGGCLVLGFGLSGDLAKLSGSYPAVAAFRRVAATLDVWELWRA----------HLI 305
Query: 450 GAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSEGHDKIEWKS 509
+ S+WE RPLS Q+ YAA DA VL++++ +R+ P V++ + ++ S
Sbjct: 306 AQAQAARPKVSDWEARPLSARQMTYAAQDAHVLVRLYGELRN-RLPAGVADQVEAVKTVS 364
Query: 510 YIVSHMDNP 518
Y +P
Sbjct: 365 YTAGASPSP 373
>gi|428301369|ref|YP_007139675.1| 3'-5' exonuclease [Calothrix sp. PCC 6303]
gi|428237913|gb|AFZ03703.1| 3'-5' exonuclease [Calothrix sp. PCC 6303]
Length = 303
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 20/162 (12%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASD---EMVFIFDLIKLAEDVPDVLDSCLTRIL 392
K + ID E K +++ + I+ D E ++IFD++ + P+++D ++ ++
Sbjct: 21 KTLWIDTEVADFKTKKPRLSLIQILSNPEDMTGEDIYIFDVL----EQPELVDKFVSAVM 76
Query: 393 QSPGILKLGYNFQCDIKQLAHSYGE-----LECFKHYEM-LLDIQNVFKEPKGGLSGLAE 446
+P I K+ +N + D+K L E LE K LL + N L LA+
Sbjct: 77 CNPEIEKIFHNAKYDLKFLGGKKAENVTCTLEMAKEIPFYLLPVDNY------QLKTLAQ 130
Query: 447 KILG-AGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
++ ++K ++ S+W QRPL+ Q++YA LD + L Q++
Sbjct: 131 ELCNFTDIDKLQQTSDWAQRPLTDEQIDYAYLDCIYLAQVYQ 172
>gi|413948992|gb|AFW81641.1| hypothetical protein ZEAMMB73_685214, partial [Zea mays]
Length = 61
Score = 55.8 bits (133), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/51 (58%), Positives = 40/51 (78%), Gaps = 3/51 (5%)
Query: 466 PLSQNQLEYAALDAVVLLQIFH-HVRSCSQPTDVSEGHDKIEWKSYIVSHM 515
PL+QNQ EYAALDAVVL+ IFH H+R +Q VSEG ++EW+S++VS +
Sbjct: 4 PLTQNQKEYAALDAVVLVHIFHEHMRRQAQ-FGVSEG-SRVEWRSHVVSRV 52
>gi|50306309|ref|XP_453127.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642261|emb|CAH00223.1| KLLA0D01309p [Kluyveromyces lactis]
Length = 744
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 77/181 (42%), Gaps = 20/181 (11%)
Query: 317 IWVDEVDGLHKAICHIEGCKVVGIDCE---WKPNYVKGCKMNKVSIMQIASDEMVFIFDL 373
IWVD V+GL+K + + ID E ++ Y C +MQI+ E +I D
Sbjct: 214 IWVDTVEGLNKMKDELSKATELAIDLEHHDYRSYYGIVC------LMQISDREHDWIVDT 267
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGE--LECFKHYEMLLDIQ 431
I L E++ L I P + K+ + DI L G + F Y
Sbjct: 268 IALREEL-----YILNDIFTDPNVTKVLHGAFMDIIWLQRDLGLYIVGLFDTYHA----S 318
Query: 432 NVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
+ PK L+ L E+ +K + ++W RPL++ L YA D LL IF +R+
Sbjct: 319 RMLGFPKHSLAYLLERFANFKTSKKYQLADWRIRPLTKPMLAYARADTHFLLNIFDKLRN 378
Query: 492 C 492
Sbjct: 379 S 379
>gi|398912875|ref|ZP_10656174.1| ribonuclease D [Pseudomonas sp. GM49]
gi|398181586|gb|EJM69141.1| ribonuclease D [Pseudomonas sp. GM49]
Length = 377
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI ++ D
Sbjct: 4 DIHWIRDNDSLGRLCAEWQQLPFVALDTE----FMRVDTFYPIAGLLQIGDGVRAYLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + P L +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LTIDNWQP------LAALLENPAVVKVVHACSEDLEVLLRLTGSLPA-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++LG L K S+W QRPLS+ Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLGIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAEVFVKLRP 170
>gi|288817697|ref|YP_003432044.1| DNA polymerase I [Hydrogenobacter thermophilus TK-6]
gi|384128458|ref|YP_005511071.1| DNA-directed DNA polymerase [Hydrogenobacter thermophilus TK-6]
gi|288787096|dbj|BAI68843.1| DNA polymerase I [Hydrogenobacter thermophilus TK-6]
gi|308751295|gb|ADO44778.1| DNA-directed DNA polymerase [Hydrogenobacter thermophilus TK-6]
Length = 576
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 72/131 (54%), Gaps = 8/131 (6%)
Query: 356 KVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY 415
K+ ++Q+ ++E VFI DL + D L L GI+ G+N + D+K L + Y
Sbjct: 35 KIRLVQLGNNEDVFIVDLFETGSYGVDFLKDLLV----DKGIV--GHNLKYDLKFL-YRY 87
Query: 416 GELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYA 475
G +E + ++ ++ Q + + + L +A LG L+K+ + SNW + LS+ QLEYA
Sbjct: 88 G-IEPYAVFDTMIASQLLGELDRHSLQKVAMHYLGEVLDKSLQMSNWGRAVLSKEQLEYA 146
Query: 476 ALDAVVLLQIF 486
ALD ++ ++
Sbjct: 147 ALDVKMVRDLY 157
>gi|195500059|ref|XP_002097212.1| GE24622 [Drosophila yakuba]
gi|194183313|gb|EDW96924.1| GE24622 [Drosophila yakuba]
Length = 583
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 13/168 (7%)
Query: 331 HIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDE-MVFIFDLIKLAEDVPDVLDSCLT 389
H + KV+G DCEW G V+++Q++S + +F L + + D+ D
Sbjct: 73 HCQTFKVLGFDCEW---ITVGGSRRPVALLQLSSHRGLCALFRLCHMKQIPKDLRD---- 125
Query: 390 RILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKIL 449
+L+ ++K+G Q D +L+H YG + ++ +P+G L L++ L
Sbjct: 126 -LLEDDAVIKVGVAPQEDAIKLSHDYG-VGVASTLDLRFLCVMAGHKPEG-LGKLSKTHL 182
Query: 450 GAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQP 495
L+K R SNWE + L QL+YAA DA++ + I+ + QP
Sbjct: 183 NYTLDKHWRLACSNWEAKNLEPKQLDYAANDALMAVAIYQKLCRDLQP 230
>gi|113969320|ref|YP_733113.1| 3'-5' exonuclease [Shewanella sp. MR-4]
gi|113884004|gb|ABI38056.1| 3'-5' exonuclease [Shewanella sp. MR-4]
Length = 299
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 82/161 (50%), Gaps = 9/161 (5%)
Query: 323 DGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPD 382
D L A+ + V+G D E + ++ G + + +S++Q+A+ + ++F L E + +
Sbjct: 104 DTLATALQQLSSESVLGFDTETRASFEPGVQ-HPLSLVQLATSDTCYLFQRAVLGERLAE 162
Query: 383 VLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLS 442
L +L++ ILK+G + D + L + +++ ++ + + + G
Sbjct: 163 -----LKPLLENERILKVGIGLRGDGQALKRDW-DIQVSPRLDLNWAMAQLGAGKEMGTR 216
Query: 443 GLAEKILGAGLNKTRRN--SNWEQRPLSQNQLEYAALDAVV 481
L +L ++K ++ SNW+Q PLSQ Q++YAALD +
Sbjct: 217 QLVAALLHKRIDKPKKITLSNWQQVPLSQAQIQYAALDTLA 257
>gi|86158027|ref|YP_464812.1| 3'-5' exonuclease [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774538|gb|ABC81375.1| 3'-5' exonuclease [Anaeromyxobacter dehalogenans 2CP-C]
Length = 294
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 84/170 (49%), Gaps = 13/170 (7%)
Query: 317 IWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKL 376
++V + D L + + + G +V+ +D E +V +V ++Q+++ F+ D I +
Sbjct: 14 VFVSDPDALTRLLDALAGERVLALDTESNSFHVY---RERVCLLQLSTRTQDFVVDPISV 70
Query: 377 AEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE 436
DV L IL G + + D++ L YG + ++ ++ + + +
Sbjct: 71 -----DV--RPLGEILCD-GREVVLHGADYDVRCLHREYG-WRIPRLFDTMIAARRLGR- 120
Query: 437 PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
P GLS L E G L+K + S+W +RPL+ +QL YAALD LL +F
Sbjct: 121 PGLGLSALVESHFGVRLSKAFQRSDWGRRPLTPDQLAYAALDTHFLLPLF 170
>gi|301619865|ref|XP_002939304.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Xenopus
(Silurana) tropicalis]
Length = 1431
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 81/158 (51%), Gaps = 13/158 (8%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
V+G D EW P Y KG K KV+++Q+ S++ ++F + +A L R+L+
Sbjct: 72 VLGFDIEWPPIYTKG-KTGKVALIQVCVSEKKCYLFHISPMAG-----FPKGLRRLLEDE 125
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQN--VFKEPKGGLSGLAEKILGAGL 453
+ K+G + D +L Y EL+ K + L ++ N + + K L+GL + + L
Sbjct: 126 SVKKVGVGIEGDQWKLMSDY-ELK-LKGFIELSEVANQKLRCKEKWSLNGLVKHLFKKQL 183
Query: 454 --NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
+ + R SNW+ PLS +Q YAA DA L I+ +
Sbjct: 184 LKDSSIRCSNWDIFPLSTDQKLYAASDAYAGLLIYQKL 221
>gi|422660413|ref|ZP_16722825.1| ribonuclease D [Pseudomonas syringae pv. lachrymans str. M302278]
gi|331019018|gb|EGH99074.1| ribonuclease D [Pseudomonas syringae pv. lachrymans str. M302278]
Length = 377
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 12/177 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI + ++ D
Sbjct: 4 DIHWIRDDDSLARHCAQWQSLPFVALDTE----FMRVDTFYPIAALLQIGDGQSAWLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + + P L+ +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LLINDWAP------LSALLENPAVIKVVHACSEDLEVLLRLTGSLPV-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
G S L +++L L K S+W QRPLS Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLNIDLPKGETRSDWLQRPLSDTQISYAAEDAVHLAELFAILR 169
>gi|392397230|ref|YP_006433831.1| ribonuclease D [Flexibacter litoralis DSM 6794]
gi|390528308|gb|AFM04038.1| ribonuclease D [Flexibacter litoralis DSM 6794]
Length = 449
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 81/185 (43%), Gaps = 29/185 (15%)
Query: 313 VEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFD 372
+ + I++ + L KA C + ID E+ N + ++QI + +++ D
Sbjct: 51 IPNPIYIKTFEELEKAALKWNKCNQIAIDTEFDDN--NNYYGRHLCLVQIYDKDKIYLID 108
Query: 373 LIKLAEDVPDVLDSCLTRILQSPGILKL-----------GYNFQCDIKQLAHSYGELECF 421
+KL ++ + L +L++P + K+ G C IK + +
Sbjct: 109 TVKLEGNI-----NPLLAVLENPNVEKIFHSCSSDLIVVGDVCNCAIKNIQ------DTA 157
Query: 422 KHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVV 481
Y LL N GL L E+ L L K + S+W +RPLS++QL YAA D +
Sbjct: 158 LMYRFLLKSHNDI-----GLQSLVEEKLNIELEKQEQVSDWAKRPLSKSQLIYAATDVIY 212
Query: 482 LLQIF 486
L ++F
Sbjct: 213 LFELF 217
>gi|17557121|ref|NP_499104.1| Protein ZK1098.3 [Caenorhabditis elegans]
gi|732219|sp|P34603.2|YO63_CAEEL RecName: Full=Uncharacterized protein ZK1098.3
gi|3881492|emb|CAA80141.1| Protein ZK1098.3 [Caenorhabditis elegans]
Length = 784
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 338 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAE--DVPDVLDSCLTRILQSP 395
+G D E+KP ++ ++++I+Q+ + ++ + + + DV + +S
Sbjct: 447 IGYDSEFKPYHLIDVSTSRLAIIQLFFKDKAWLINCVAIDNLASRDDVWIRLYKGLFESN 506
Query: 396 GILKLGYNFQCDIKQL-----------AHSYGELECFKHYE-----MLLDIQNVFKEPKG 439
+G++ + DI+ + + + C K + +DI N+
Sbjct: 507 KFSIVGFDIRQDIEAMFTVPSINKNFKIENIQNVICVKSLAENVNALSMDILNL-STKTS 565
Query: 440 GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVS 499
LS LA+ ++G ++K+ + NW+ RPL +NQ+ YA +DAV + ++F + +V
Sbjct: 566 KLSVLADHLVGLKMDKSEQCGNWQCRPLRRNQIIYAVMDAVAVFEVFQKI------VEVV 619
Query: 500 EGHDKIEWKSYIVSHMDNPKKSKKR 524
H+ K + SHM KK K R
Sbjct: 620 RKHELDAEKLLVESHMITVKKEKVR 644
>gi|254411454|ref|ZP_05025231.1| FtsK/SpoIIIE family, putative [Coleofasciculus chthonoplastes PCC
7420]
gi|196181955|gb|EDX76942.1| FtsK/SpoIIIE family, putative [Coleofasciculus chthonoplastes PCC
7420]
Length = 862
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 72/145 (49%), Gaps = 16/145 (11%)
Query: 356 KVSIMQIASD------EMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIK 409
++S++QI +D + +IFD++ D PD++ + +I+ +P I K+ +N D+K
Sbjct: 37 RLSLIQILADPTDRTGDRAYIFDVL----DNPDIVRDFVAQIMVNPNIEKVFHNASFDLK 92
Query: 410 QLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGL------NKTRRNSNWE 463
L + ++++ + ++ +S K L L +KT ++S+W
Sbjct: 93 FLGGKHQAQNVTCTFKLVRKLTKKSRKTPLQVSNKQLKTLAVELCHFTNVDKTEQSSDWG 152
Query: 464 QRPLSQNQLEYAALDAVVLLQIFHH 488
QRPL+ QL YA +D V L + H
Sbjct: 153 QRPLTPKQLHYAKMDTVYLAHVHRH 177
>gi|367017047|ref|XP_003683022.1| hypothetical protein TDEL_0G04440 [Torulaspora delbrueckii]
gi|359750685|emb|CCE93811.1| hypothetical protein TDEL_0G04440 [Torulaspora delbrueckii]
Length = 735
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 20/201 (9%)
Query: 297 EAGFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCE---WKPNYVKGCK 353
E+ V S + K + +WVD ++ L I ++ + +D E ++ Y C
Sbjct: 192 ESVIVKSEPIPSKPWETTEALWVDNIEVLKTMISDLKSVTEIAVDLEHHDYRSYYGIVC- 250
Query: 354 MNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAH 413
+MQI++ E ++ D I L +D+ L + +P ILK+ + DI L
Sbjct: 251 -----LMQISTRERDYLIDTIALRDDL-----QILNEVFANPKILKVFHGAFMDIIWLQR 300
Query: 414 SYG--ELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQ 471
G + F + P+ L+ L EK +K + ++W RPLS+
Sbjct: 301 DLGLYVVSLFDTFHA----SRAIGLPRHSLAYLLEKFANFKTSKKYQLADWRLRPLSKAM 356
Query: 472 LEYAALDAVVLLQIFHHVRSC 492
YA D LL I+ +R+
Sbjct: 357 NAYARADTHFLLNIYDQLRNT 377
>gi|83645396|ref|YP_433831.1| ribonuclease D [Hahella chejuensis KCTC 2396]
gi|83633439|gb|ABC29406.1| ribonuclease D [Hahella chejuensis KCTC 2396]
Length = 398
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 85/178 (47%), Gaps = 22/178 (12%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKV-SIMQIASDEMVFIFDLIKL 376
W+D L +A+ +E + +D E +++G +++Q+ + V++ D++K+
Sbjct: 19 WIDTPAALQEALLRLEKTDWLAVDTE----FIRGTTFYPAPALLQLYDRQCVYLVDMLKI 74
Query: 377 AEDVPDVLDSCLTRILQSPGILKLGYNFQCDIK-----QLAHSYGELECFKHYEMLLDIQ 431
+ S ++R+ +S ILK+ + D++ L+ G ++ + LLD
Sbjct: 75 TDW------SGVSRLFESRDILKVVHACSEDLELFNCVGLSQPCGLIDT-QVANALLD-- 125
Query: 432 NVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
E GL L + LG L K S+W QRPL+ Q++YA D VVL ++ +
Sbjct: 126 ---GELNEGLQSLVRQNLGIELEKHATRSDWTQRPLTDKQIQYAQEDVVVLWPLYQKL 180
>gi|21356549|ref|NP_650075.1| CG6744, isoform A [Drosophila melanogaster]
gi|386765579|ref|NP_001247048.1| CG6744, isoform B [Drosophila melanogaster]
gi|10726453|gb|AAF54639.2| CG6744, isoform A [Drosophila melanogaster]
gi|19528113|gb|AAL90171.1| AT25352p [Drosophila melanogaster]
gi|383292644|gb|AFH06366.1| CG6744, isoform B [Drosophila melanogaster]
Length = 583
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Query: 331 HIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDE-MVFIFDLIKLAEDVPDVLDSCLT 389
H + KV+G DCEW G V+++Q++S + +F L + + D L
Sbjct: 73 HCQTFKVLGFDCEW---ITVGGSRRPVALLQLSSHRGLCALFRLCHMKQIPQD-----LR 124
Query: 390 RILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKIL 449
+L+ ++K+G Q D +L+H YG + ++ +P+G L L++ L
Sbjct: 125 ELLEDDSVIKVGVAPQEDAMKLSHDYG-VGVASTLDLRFLCVMAGHKPEG-LGKLSKTHL 182
Query: 450 GAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQP 495
L+K R SNWE + L QL+YAA DA++ + I+ + QP
Sbjct: 183 NYTLDKHWRLACSNWEAKTLEPKQLDYAANDALMAVAIYQKLCRDLQP 230
>gi|229442293|gb|AAI72837.1| Werner syndrome protein [synthetic construct]
Length = 281
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 82/160 (51%), Gaps = 17/160 (10%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG D EW P Y +G K+ KV+++Q+ S+ ++F + ++ V L +L++
Sbjct: 78 VVGFDMEWPPLYNRG-KLGKVALIQLCVSESKCYLFHVSSMS-----VFPQGLKMLLENK 131
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPK----GGLSGLAEKILGA 451
+ K G + D +L + K++ L D+ N K+ K L+ L + +LG
Sbjct: 132 AVKKAGVGIEGDQWKLLRDFDIK--LKNFVELTDVAN--KKLKCTETWSLNSLVKHLLGK 187
Query: 452 GL--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L +K+ R SNW + PL+++Q YAA DA I+ ++
Sbjct: 188 QLLKDKSIRCSNWSKFPLTEDQKLYAATDAYAGFIIYRNL 227
>gi|194743424|ref|XP_001954200.1| GF18156 [Drosophila ananassae]
gi|190627237|gb|EDV42761.1| GF18156 [Drosophila ananassae]
Length = 586
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 13/159 (8%)
Query: 331 HIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDE-MVFIFDLIKLAEDVPDVLDSCLT 389
H + KV+G DCEW G V+++Q++S + + +F L + + D L
Sbjct: 73 HCQKFKVLGFDCEW---ITVGGSRRPVALLQLSSHQGLCALFRLCHMKQIPKD-----LR 124
Query: 390 RILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKIL 449
+L+ ++K+G Q D +L+H YG + ++ +P+G L L+ + L
Sbjct: 125 ELLEDDAVIKVGVAPQEDAMKLSHDYG-VGVASTLDLRFLCVMAGHKPEG-LGKLSFRHL 182
Query: 450 GAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIF 486
L+K R SNWE + L QL YAA DA+V + I+
Sbjct: 183 DYPLDKNWRLACSNWEAKQLEPPQLNYAANDALVAVAIY 221
>gi|28871074|ref|NP_793693.1| ribonuclease D [Pseudomonas syringae pv. tomato str. DC3000]
gi|28854324|gb|AAO57388.1| ribonuclease D [Pseudomonas syringae pv. tomato str. DC3000]
Length = 377
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 12/177 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI + ++ D
Sbjct: 4 DIHWIRDDDSLARHCAQWQSLPFVALDTE----FMRVDTFYPIAALLQIGDGQSAWLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + + P L+ +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LLINDWAP------LSALLENPAVIKVVHACSEDLEVLLRLTGSLPV-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
G S L +++L L K S+W QRPLS Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLNIDLPKGETRSDWLQRPLSDTQISYAAEDAVHLAELFAILR 169
>gi|119491955|ref|XP_001263472.1| exosome component 3'-5' exonuclease [Neosartorya fischeri NRRL 181]
gi|119411632|gb|EAW21575.1| exosome complex exonuclease Rrp6, putative [Neosartorya fischeri
NRRL 181]
Length = 765
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 86/198 (43%), Gaps = 13/198 (6%)
Query: 296 PEAGFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMN 355
PE+ + S + + +VD ++G+ + + ++ K + ID E ++
Sbjct: 205 PESTYTVSHPVEYQPFESTAATFVDTLEGVKEMLSELKSAKEIAIDLE---HHDVHSYHG 261
Query: 356 KVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY 415
VS+MQI++ + ++ D +K + +L+ + PGILK+ + DI L
Sbjct: 262 LVSLMQISTRDKDWVVDTLKPWREELQILN----EVFADPGILKVLHGSSMDIIWLQRDL 317
Query: 416 G--ELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLE 473
G + F Y PK L L +K + +K + ++W RPL +
Sbjct: 318 GLYVVGMFDTYHAAC----ALNYPKRSLKFLLQKFVNFEADKRYQMADWRIRPLPSGMFD 373
Query: 474 YAALDAVVLLQIFHHVRS 491
YA D LL I+ H+R+
Sbjct: 374 YARSDTHYLLYIYDHLRN 391
>gi|431904509|gb|ELK09892.1| Exonuclease 3'-5' domain-containing protein 2 [Pteropus alecto]
Length = 259
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 26/221 (11%)
Query: 331 HIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDE----MVFIFDLIKLAEDVPDVLDS 386
+E +GIDCEW ++G K + +S++Q+AS +V + LI + +P L
Sbjct: 7 ELEDFPALGIDCEWV--NLEG-KASPLSLLQMASPSGFCVLVRLPKLICGGKTLPKTL-- 61
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGEL--ECFK-HYEMLLDIQNVFKEPKGGLS- 442
IL ILK+G D +L YG + C Y ++ N+ GLS
Sbjct: 62 --LNILADGAILKVGVGCSEDASKLLQDYGLVVKGCLDLRYLAMMQRNNLLCN---GLSL 116
Query: 443 -GLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS--CSQPTD 497
LAE +L L+K+ R SNW+ L+++Q+ YAA DA + + +F + S+ +
Sbjct: 117 KSLAEAVLNFPLDKSLVLRCSNWDAENLTEDQVIYAARDAQISVALFLRLLGYPFSRNSP 176
Query: 498 VSEGHDKIEWKSYI---VSHMDNPKKSKKRPTIKKETESGA 535
+ E D + W+ + +D P +SK+ + +E A
Sbjct: 177 LEENSDLVGWRKVLEKCQDVVDIPFRSKEMSRLGEEVNGEA 217
>gi|213969693|ref|ZP_03397828.1| ribonuclease D [Pseudomonas syringae pv. tomato T1]
gi|301383544|ref|ZP_07231962.1| ribonuclease D [Pseudomonas syringae pv. tomato Max13]
gi|302062110|ref|ZP_07253651.1| ribonuclease D [Pseudomonas syringae pv. tomato K40]
gi|302130100|ref|ZP_07256090.1| ribonuclease D [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|213925501|gb|EEB59061.1| ribonuclease D [Pseudomonas syringae pv. tomato T1]
Length = 377
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 12/177 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI + ++ D
Sbjct: 4 DIHWIRDDDSLARHCAQWQSLPFVALDTE----FMRVDTFYPIAALLQIGDGQSAWLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + + P L+ +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LLINDWAP------LSALLENPAVIKVVHACSEDLEVLLRLTGSLPV-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
G S L +++L L K S+W QRPLS Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLNIDLPKGETRSDWLQRPLSDTQISYAAEDAVHLAELFAILR 169
>gi|289549017|ref|YP_003474005.1| DNA-directed DNA polymerase [Thermocrinis albus DSM 14484]
gi|289182634|gb|ADC89878.1| DNA-directed DNA polymerase [Thermocrinis albus DSM 14484]
Length = 575
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 73/132 (55%), Gaps = 8/132 (6%)
Query: 355 NKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHS 414
+++ ++Q+ +F+ DL +L E VL L +L G++ G+N + D+K L
Sbjct: 34 DRLRLVQLGGQGEIFLLDLFELGER--GVL--FLKELLSQKGVV--GHNLKFDLKYLYRY 87
Query: 415 YGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEY 474
+ +E + ++ ++ Q + + + L +A LG L+K+ + S+W R L++ QLEY
Sbjct: 88 H--IEPYAVFDTMVASQLLAELDRHSLQSVAMHYLGQVLDKSLQLSDWGSRVLTKAQLEY 145
Query: 475 AALDAVVLLQIF 486
AALD VV+ +F
Sbjct: 146 AALDVVVVRDLF 157
>gi|403158310|ref|XP_003307622.2| hypothetical protein PGTG_00572 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375163765|gb|EFP74616.2| hypothetical protein PGTG_00572 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1125
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 92/209 (44%), Gaps = 53/209 (25%)
Query: 319 VDEVDGLHKAICH-----------IEGCKVVGI--DCEWKPNYVKGCKMNKVSIMQIASD 365
+ E+ L K++C+ +EG V + D EW + V+G + N+ +++Q+ S
Sbjct: 467 ISELPQLIKSLCNDGISLPSGRSELEGGPYVAVAFDMEWTISRVRGHE-NRTAVIQLGSR 525
Query: 366 EMVFIFDLIKLAEDVP----DVLDSCLTRILQSPGILKLGYNFQCD-------------- 407
V I ++++ DV ++ SCL L +P I+K+G + D
Sbjct: 526 SQVLI---VQISSDVAWRAQGIMPSCLIDFLVNPQIVKIGVGIRNDGLKLIRDHKLGQKP 582
Query: 408 -------IKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNS 460
+ +L + G+ +C Y L+ +Q + + L KI R S
Sbjct: 583 FLNSFLELSRLVRALGQPDCASGYSRLISLQQIVAD---HLKVYLPKI-------DTRTS 632
Query: 461 NWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
+W +PL+ Q++YAA D + +++ H+
Sbjct: 633 DWA-KPLTATQIDYAASDVIATVRVTMHL 660
>gi|288802306|ref|ZP_06407746.1| 3'-5' exonuclease domain protein [Prevotella melaninogenica D18]
gi|288335273|gb|EFC73708.1| 3'-5' exonuclease domain protein [Prevotella melaninogenica D18]
Length = 224
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 17/168 (10%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
KA+ ++ ++GID E +P + KG + KV+++Q E+ F+F L + VPD
Sbjct: 36 EKAVNYLLSKDIIGIDTETRPVFKKG-QRRKVALLQACDREVCFLFRLNLIG--VPD--- 89
Query: 386 SCLTRILQSPGILKLGYNFQCDI----KQLAHSYGELECFKHYEMLLDIQNVFKEPKGGL 441
C+ R L+ + K+G + D+ ++L G + Y L I+++ L
Sbjct: 90 -CIKRFLEDTTVPKVGLSLGDDMLMLHQRLDFKPGYFIDLQDYVKSLGIEDM------SL 142
Query: 442 SGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L + + K + SNWE LS Q YA+ DA ++++ +
Sbjct: 143 QKLYANVFQERITKREQLSNWENEILSDKQKIYASTDAWTCIKLYERL 190
>gi|242056095|ref|XP_002457193.1| hypothetical protein SORBIDRAFT_03g003040 [Sorghum bicolor]
gi|241929168|gb|EES02313.1| hypothetical protein SORBIDRAFT_03g003040 [Sorghum bicolor]
Length = 242
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 82/197 (41%), Gaps = 24/197 (12%)
Query: 331 HIEGCKVVGIDCEWKPNYVK--GCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCL 388
H VG+ +W P + K G + +Q+ S I+ + + VP +L
Sbjct: 49 HSAAGLTVGLGVQWTPPFRKLPGGAEPRPGTLQLCSGNRCLIYQIARAGGVVPKIL---- 104
Query: 389 TRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKI 448
R L I Y D ++L +G LE L++Q ++ +A+++
Sbjct: 105 RRFLADARITFAVYGVASDCRKLRAHHG-LELGS----TLELQGAAGMGNASMAEMADRL 159
Query: 449 LG---AGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSC--------SQP 495
LG G+ K+RR S W+ LS+ Q+ YA +DA + + H+R S P
Sbjct: 160 LGIVRGGVEKSRRISTSTWDGPRLSRGQVRYACVDAFLSRCLGEHIRRDMASDDEYESDP 219
Query: 496 TDVSEGHDKIEWKSYIV 512
D S+ EW+S V
Sbjct: 220 DDGSDSTAGEEWESDAV 236
>gi|115396098|ref|XP_001213688.1| exosome component 3'-5' exonuclease [Aspergillus terreus NIH2624]
gi|114193257|gb|EAU34957.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 761
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 13/198 (6%)
Query: 296 PEAGFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMN 355
P+ +V S + +VD V+G+ + + ++ K + ID E ++
Sbjct: 205 PDPTYVESPPVDYLPFESTTATFVDTVEGVKEMLGELKAAKEIAIDLE---HHDVHSYHG 261
Query: 356 KVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY 415
VS+MQI++ E ++ D +K + +L+ T P ILK+ + DI L
Sbjct: 262 LVSLMQISTREKDWVVDTLKPWREELQMLNEVFT----DPSILKVLHGSSMDIIWLQRDL 317
Query: 416 GE--LECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLE 473
G + F Y PK L L +K + +K + ++W RPL +
Sbjct: 318 GLYIVGMFDTYHAAC----ALNYPKRSLKYLLQKFVNFEADKRYQMADWRIRPLPSGMFD 373
Query: 474 YAALDAVVLLQIFHHVRS 491
YA D LL I+ H+R+
Sbjct: 374 YARSDTHYLLHIYDHLRN 391
>gi|288870561|ref|ZP_06409803.1| DNA-directed DNA polymerase [Clostridium hathewayi DSM 13479]
gi|288866720|gb|EFC99018.1| DNA-directed DNA polymerase [Clostridium hathewayi DSM 13479]
Length = 653
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 77/137 (56%), Gaps = 13/137 (9%)
Query: 355 NKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHS 414
+++ ++QI++ + + +I A +PD +CL +L +P K+ +N + D+ Q
Sbjct: 113 DRLRLIQISAPGIPVL--VIDCAAFLPDGF-ACLKELLNTPS-EKIFHNARFDL-QFLMG 167
Query: 415 YGELECFKHYEMLLDIQNVFKEP-----KGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQ 469
G ++CF ++ +L Q P K GL+ +A+ LG L+KT + +W+ L+
Sbjct: 168 IG-IDCFPVFDTMLAAQ--LLRPCGGPLKAGLAVVADHYLGIKLDKTEQTGSWDSASLTG 224
Query: 470 NQLEYAALDAVVLLQIF 486
+QL YAALDA +LL+++
Sbjct: 225 SQLAYAALDAWILLKLY 241
>gi|195329844|ref|XP_002031620.1| GM26098 [Drosophila sechellia]
gi|194120563|gb|EDW42606.1| GM26098 [Drosophila sechellia]
Length = 583
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Query: 331 HIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDE-MVFIFDLIKLAEDVPDVLDSCLT 389
H + KV+G DCEW G V+++Q++S + +F L + + D L
Sbjct: 73 HCQTFKVLGFDCEW---ITVGGSRRPVALLQLSSHRGLCALFRLCHMKQIPKD-----LR 124
Query: 390 RILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKIL 449
+L+ ++K+G Q D +L+H YG + ++ +P+G L L++ L
Sbjct: 125 ELLEDDDVIKVGVAPQEDAMKLSHDYG-VGVASTLDLRFLCVMAGHKPEG-LGKLSKTHL 182
Query: 450 GAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQP 495
L+K R SNWE + L QL+YAA DA++ + I+ + QP
Sbjct: 183 NYTLDKHWRLACSNWEAKTLEPKQLDYAANDALMAVAIYQKLCRDLQP 230
>gi|308810304|ref|XP_003082461.1| Exosome 3'-5' exoribonuclease complex, subunit PM/SCL-100 (Rrp6)
(ISS) [Ostreococcus tauri]
gi|116060929|emb|CAL57407.1| Exosome 3'-5' exoribonuclease complex, subunit PM/SCL-100 (Rrp6)
(ISS) [Ostreococcus tauri]
Length = 701
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 19/182 (10%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKP-NYVKGCKMNKVSIMQIASDEMVFIFDLI 374
++ VD D L + H+E CK +D E KG +MQ+++ E F+ D++
Sbjct: 119 LVVVDTEDALEELATHLEQCKEFAVDLEHHSYRSFKGF----TCLMQVSTREKDFVVDVL 174
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDI--- 430
L V D L + P LK+ + D++ L +G + C L D
Sbjct: 175 ALRSLVRD----ALGKAFADPNTLKVMHGADNDVQWLQKDFGIFVSC------LFDTGQA 224
Query: 431 QNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
V + P L+ L + G NK + ++W RPL++ L+YA D LL ++ ++
Sbjct: 225 ARVLELPSKALAYLLQHYCGIKANKKFQLADWRVRPLTREMLDYARGDTHYLLYVYDELK 284
Query: 491 SC 492
Sbjct: 285 KA 286
>gi|225440183|ref|XP_002278250.1| PREDICTED: Werner Syndrome-like exonuclease [Vitis vinifera]
Length = 213
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 20/152 (13%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
+VG+D EW+P++ + N V+ +Q+ IF L+ A +P + L L++PG
Sbjct: 58 IVGLDVEWRPSFNPQIE-NPVATLQLCVGRSCLIFQLLH-APAIP----ASLNAFLRNPG 111
Query: 397 ILKLGYNFQCDIKQLAHSYG-------ELECFKHYEMLLDIQNVFKEPKGGLSGLAEKIL 449
+G D+++L +G +L +E+ N + GL L ++L
Sbjct: 112 YTFVGVGIDDDLEKLVGDHGLGVSNAVDLRGLAAHEL-----NKMELRNAGLKRLGLEVL 166
Query: 450 GAGLNKTRRN--SNWEQRPLSQNQLEYAALDA 479
G + K RR S W+ LS +Q++YA +DA
Sbjct: 167 GKEVQKPRRVTLSRWDNFYLSTDQVQYACVDA 198
>gi|88705065|ref|ZP_01102777.1| ribonuclease D [Congregibacter litoralis KT71]
gi|88700760|gb|EAQ97867.1| ribonuclease D [Congregibacter litoralis KT71]
Length = 370
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 34/198 (17%)
Query: 319 VDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAE 378
V+ D L A+ + G + +D E+ + ++++Q+ +D+ ++ D + ++
Sbjct: 6 VENDDSLRGALASLAGADEIAVDTEF---MRRNSYYPHIALLQLCTDDHAWLIDPLTISN 62
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHY-----EMLLDIQNV 433
LD G+ L + C IK L +LE F+H+ L+D Q
Sbjct: 63 -----LD----------GLRALLTDSAC-IKVLHSCSEDLEVFRHWLGVLPSPLVDTQRA 106
Query: 434 FKE-PKG---GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
KG G L +++LG L+K S+W +RPLS++Q YAALD + L+ + +
Sbjct: 107 TALLGKGFGLGYRALVKELLGVELDKGETRSDWLKRPLSESQCHYAALDVLELVPAWRIL 166
Query: 490 RSCSQPTDVSEGHDKIEW 507
R +++E +++W
Sbjct: 167 R------ELAEEQGRMQW 178
>gi|50286743|ref|XP_445801.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525107|emb|CAG58720.1| unnamed protein product [Candida glabrata]
Length = 737
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 22/181 (12%)
Query: 317 IWVDEVDGLHKAICHIEGCKVVGIDCE---WKPNYVKGCKMNKVSIMQIASDEMVFIFDL 373
IWVD ++ L + ++ + +D E ++ Y C +MQI++ +I D
Sbjct: 214 IWVDNINSLQDMMQELKKSSEIAVDLEHHDFRSYYGLVC------LMQISTRTQDYIVDT 267
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
I L +D+ L + +P I K+ + DI L G + L D +
Sbjct: 268 IALRDDL-----KMLNEVFTNPLITKVFHGAFMDIIWLQRDLG-----LYIVSLFDTFHA 317
Query: 434 FKE---PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
K PK L+ L EK +K + ++W +RPLS+ + YA D LL IF +R
Sbjct: 318 SKALGLPKHSLAYLLEKYANFKTSKKYQLADWRRRPLSKAMMAYARADTHFLLNIFDQMR 377
Query: 491 S 491
+
Sbjct: 378 N 378
>gi|429327222|gb|AFZ78982.1| 3-5 exonuclease domain containing protein [Babesia equi]
Length = 245
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 11/175 (6%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCK----MNKVSIMQIASDEMVFIF 371
II V+ + ++ I + VG D E+ P+Y + K S++QI D I+
Sbjct: 56 IIDNTNVNEYNTSVEQILNTRCVGFDLEYLPDYYASIREISDRRKPSLVQICGDSTCLIY 115
Query: 372 DLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQ 431
+ K+ + L IL + ILK+ + D+ L +G + C ++ LL I
Sbjct: 116 LIYKIG-----YIPLSLLNILNNTNILKVSHGAPSDMLLLYRHFGTI-C-TNFVDLLKIC 168
Query: 432 NVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
K L +L L+K ++ SNWE + L+ Q+ YA+ DA V QI+
Sbjct: 169 RENKIHPTTLQNATAHVLNLKLSKRQQCSNWEAKTLTTEQIAYASTDAWVTRQIY 223
>gi|289743269|gb|ADD20382.1| putative salivary expressed 3'-5' exonuclease [Glossina morsitans
morsitans]
Length = 339
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 20/184 (10%)
Query: 319 VDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAE 378
VD ++ L + H KV+G DCEW G N V+++Q+AS ++
Sbjct: 57 VDTINTLRE---HCRHYKVLGFDCEW---ITVGRVRNPVALLQLASPNGFCGLFRLRHMH 110
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV---FK 435
+P+ L + +L+ I+K+G + D ++L YG + DI+ + +
Sbjct: 111 HIPESLKN----LLRDKEIIKVGVDPAGDARKLQEDYG-----IYVASTFDIRYLAVMIR 161
Query: 436 EPKGGLSGLAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCS 493
GL L+ +L K SNWE L +Q+EYAA DA ++IF H+ +
Sbjct: 162 CKPLGLEKLSRSLLNVDFVKRGYIGRSNWEFDKLDDDQVEYAANDAFAGVEIFKHLANRL 221
Query: 494 QPTD 497
+P +
Sbjct: 222 KPRN 225
>gi|238575785|ref|XP_002387790.1| hypothetical protein MPER_13270 [Moniliophthora perniciosa FA553]
gi|215448580|gb|EEB88720.1| hypothetical protein MPER_13270 [Moniliophthora perniciosa FA553]
Length = 361
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 338 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGI 397
VG+D EWKPN G + N+V+++Q+A+ F+ + K+ L + +T +L+SP I
Sbjct: 27 VGLDIEWKPNR-HGDQHNEVAMLQLATGTETFLIHVAKIGH-----LPTIVTNLLESPLI 80
Query: 398 LKLGYNFQCDIKQLAHSY--GELECFKHYEMLLDIQNV-FKE--------PKG------- 439
K G Q D+K+L + C + L I + F+E P+G
Sbjct: 81 WKAGVGIQEDVKKLHRDFHVSITSCVDLSMLALSIDCLQFEERTGIYSAIPRGIENTAEK 140
Query: 440 ------------GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLE 473
LS LA+ G L K ++WE++ L+Q + E
Sbjct: 141 HRTYKGHIKRAIALSKLAKSYAGMELTKNNAMTDWEKKDLTQEEKE 186
>gi|386314733|ref|YP_006010898.1| 3'-5' exonuclease [Shewanella putrefaciens 200]
gi|319427358|gb|ADV55432.1| 3'-5' exonuclease [Shewanella putrefaciens 200]
Length = 301
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 78/158 (49%), Gaps = 9/158 (5%)
Query: 325 LHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVL 384
L + I +V+G D E + ++ +G + + +S++QIA+ + ++F L E +
Sbjct: 103 LTTVLQSISKQRVIGFDTETRASFERGVQ-HPLSLIQIATHDTCYLFQHALLDEQL---- 157
Query: 385 DSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGL 444
L +L+ ILK+G + D + L +G + ++ + + + G L
Sbjct: 158 -GLLKPVLEDENILKVGVGLRSDGQALTREWG-INVTPRLDLNWVLAQLGAGKEMGTRQL 215
Query: 445 AEKILGAGLNKTRRN--SNWEQRPLSQNQLEYAALDAV 480
+L ++K ++ SNW+Q PL+ Q+ YAALDA+
Sbjct: 216 VATLLQKRIDKPKKVTLSNWQQVPLTSTQIVYAALDAL 253
>gi|432954565|ref|XP_004085540.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Oryzias latipes]
Length = 623
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 7/157 (4%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
V+G+DCEW VKG + ++VS++Q+++ + + + + +L+ P
Sbjct: 116 VLGLDCEWV--SVKG-RASEVSLLQMSTYSGLCALVRLLVFRNGQRAFPLSFVELLKDPK 172
Query: 397 ILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDIQNVFKEPKG-GLSGLAEKILGAGLN 454
+LK+G D K+L +G L C L Q G L LA +L L+
Sbjct: 173 VLKVGVGCYEDGKRLTRDHGLVLSCTVDLRYLAMRQRRTAADNGLSLKSLAADLLNFSLD 232
Query: 455 KTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
K+ R S+WE L+ NQ+ YAA DA V + +F H+
Sbjct: 233 KSPELRCSDWEADQLTLNQVTYAARDAQVAVALFLHL 269
>gi|412992429|emb|CCO18409.1| predicted protein [Bathycoccus prasinos]
Length = 394
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 39/205 (19%)
Query: 314 EDIIWVDEV--DGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIF 371
E ++++D + + + ++ KV+ DCE V+ + K++++QIA + +F+
Sbjct: 146 EQVVFIDSYTSEAFTQCVLELKRAKVIAYDCEG----VRLSRTGKITLLQIAIPKKIFLI 201
Query: 372 DLIKLA-EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDI 430
D++ + ++V D L I++S ILKL Y+ + D L H + + + +LD+
Sbjct: 202 DVMTIGGKEV--FTDGGLKDIIESEEILKLAYDVRMDSDALFHQHDVV-----LKNVLDL 254
Query: 431 QNVFKEPKGGLSGLAEKILGAGLNKTRRNSN-------------------------WEQR 465
Q + + G+ E + +RR +N W +R
Sbjct: 255 QLLDIAIRRAAGGIVEHLPSLSKTVSRRLTNAEILVCEDLKKRVKNMYTSVEDGDLWARR 314
Query: 466 PLSQNQLEYAALDAVVLLQIFHHVR 490
PL + YAALDA VL+++ +R
Sbjct: 315 PLIDDARRYAALDAWVLMKLDQAMR 339
>gi|392559323|gb|EIW52507.1| hypothetical protein TRAVEDRAFT_24023 [Trametes versicolor
FP-101664 SS1]
Length = 1484
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 10/163 (6%)
Query: 333 EGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRIL 392
+ V D EW + G +V+++QIA + +++ ED L S L L
Sbjct: 599 DSLATVAFDMEWPVDTSNGIH-GRVALIQIAYQQSIYLIQTSSFIEDGKIRLPSSLLTFL 657
Query: 393 QSPGILKLGYNFQCDIKQL----AHSYGELECFKHYEM--LLDIQNVFKEPKGGLSGLAE 446
+SP K+G N D K+L S G+ H E+ L +N GL+ L
Sbjct: 658 RSPLYRKVGVNIGADFKKLFADCGFSLGDPVFAGHVELGALAVSRNAAMRRGVGLADLVR 717
Query: 447 KILGAGLNK---TRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
+L LNK R ++ W R L + + YAALD + ++
Sbjct: 718 NVLRRSLNKDPNIRVSTRWADRELLPDFVAYAALDVYAVWAVY 760
>gi|434391355|ref|YP_007126302.1| 3'-5' exonuclease [Gloeocapsa sp. PCC 7428]
gi|428263196|gb|AFZ29142.1| 3'-5' exonuclease [Gloeocapsa sp. PCC 7428]
Length = 309
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 17/175 (9%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEM---VFIFD 372
++++ + ++ I K + +D E +++ + ++ SD + V I D
Sbjct: 1 MLYLRDASEINALIAQYTHKKTLWVDTEIADFNTHNPRLSLIQVLGDPSDTIGKTVVILD 60
Query: 373 LIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGE-----LECFKHYEML 427
+I D P+++++ + I+ SP I K+ + D+K L + + LE K+
Sbjct: 61 VI----DQPEIVENFIDSIMCSPTIEKVFHQASYDLKFLGKNKAKNVTCTLEMAKNIPYY 116
Query: 428 LDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVL 482
L P L L E + ++KT + S+W QRPLS QL YA +D V L
Sbjct: 117 L-----LPLPNFSLKTLVEALYHINVDKTEQTSDWGQRPLSDIQLNYAKMDPVYL 166
>gi|157823431|ref|NP_001102185.1| exonuclease 3'-5' domain-containing protein 2 [Rattus norvegicus]
gi|149025011|gb|EDL81378.1| exonuclease 3''-5'' domain-like 2 (predicted) [Rattus norvegicus]
gi|183986019|gb|AAI66432.1| Exdl2 protein [Rattus norvegicus]
Length = 648
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 20/204 (9%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDE----MVFIFDLIKLAEDVPDVLDSC 387
+E V+GIDCEW ++G K + +S++Q+AS +V + LI + +P
Sbjct: 126 LEDFPVLGIDCEWV--NLEG-KASPLSLLQMASPSGFCALVRLPRLIYGGKTLP----RT 178
Query: 388 LTRILQSPGILKLGYNFQCDIKQLAHSYGEL--ECFKHYEMLLDIQNVFKEPKGGLSGLA 445
L IL ILK+G D +L YG + C + + N L LA
Sbjct: 179 LLDILADGTILKVGVGCSEDANKLLQDYGLIVRGCLDLRYLAMKQGNSVLCNGLSLKSLA 238
Query: 446 EKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV--RSCSQPTDVSEG 501
E +L L+K+ R SNW+ L+++Q+ YAA DA + + +F H+ S+ + E
Sbjct: 239 ETLLNFPLDKSLLLRCSNWDAENLTEDQVTYAARDAQISVALFLHLLGYPFSRNSYEEEN 298
Query: 502 HDKIEWKSYI---VSHMDNPKKSK 522
+ +I W+ + +D P +SK
Sbjct: 299 NGQINWQKVLEKCRDMVDIPFRSK 322
>gi|374585390|ref|ZP_09658482.1| 3'-5' exonuclease [Leptonema illini DSM 21528]
gi|373874251|gb|EHQ06245.1| 3'-5' exonuclease [Leptonema illini DSM 21528]
Length = 377
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 76/185 (41%), Gaps = 29/185 (15%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
D I++D L A ++ + +D E Y +++ ++QI++D FI D +
Sbjct: 3 DYIYIDRQQPLDLAYSVLDKAPYLAVDTESSGYY---TYYSELCLIQISTDSQHFIIDTL 59
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF 434
E L I I K+ + D+ + YG NVF
Sbjct: 60 AKLEL------QRLAHIFAGQNIPKIFHAAASDMGEFRRQYG-----------WSFANVF 102
Query: 435 ---------KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ L L ++ +G L K + SNW +RPL+++QL+YA LD V L QI
Sbjct: 103 DTHMAARYLRHEACSLLALVQRYVGVELEKKEQKSNWMKRPLTKSQLDYAHLDTVYLYQI 162
Query: 486 FHHVR 490
++
Sbjct: 163 MQQMK 167
>gi|351715433|gb|EHB18352.1| Werner syndrome ATP-dependent helicase [Heterocephalus glaber]
Length = 1411
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
V+G D EW P Y KG K+++V+++Q+ S+ ++F + ++ V L +L++
Sbjct: 78 VIGFDMEWPPIYNKG-KLSRVALVQLCVSESKCYLFHISSMS-----VFPQGLKMLLENE 131
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPK----GGLSGLAEKILGA 451
I K G + D +L + K + L D+ N ++ K L+GL + + G
Sbjct: 132 TIKKAGVGIEGDQWKLLRDFDIK--LKSFVELTDVAN--QKLKCMEIWSLNGLVKHLFGK 187
Query: 452 GL--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
L +K+ R SNW PLS++Q YAA DA L I+ + S
Sbjct: 188 QLLKDKSIRCSNWSIFPLSEDQKLYAATDAYAGLIIYQKLES 229
>gi|434404737|ref|YP_007147622.1| ribonuclease D [Cylindrospermum stagnale PCC 7417]
gi|428258992|gb|AFZ24942.1| ribonuclease D [Cylindrospermum stagnale PCC 7417]
Length = 306
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 18/163 (11%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIM---QIASDEMVFIFDLIKLAEDVPDVLDSCLTRIL 392
K + ID E + K++ + I+ Q S + V++ D++ D PDV+D+ + +I+
Sbjct: 21 KTLWIDTEVADYKSRKPKLSLIQILDNPQDMSGDCVYLLDVL----DQPDVIDNFIEQIM 76
Query: 393 QSPGILKLGYNFQCDIKQLAHSYGE-----LECFKHYEMLLDIQNVFKEPKGGLSGLAEK 447
+ I K+ +N D+K L + + LE K L P L LA +
Sbjct: 77 VNSAIEKVFHNASFDLKFLGNKQAKNITCTLEMAKKIPYYL-----LPLPNYQLKTLATE 131
Query: 448 ILG-AGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
+ ++K + S+W +RPL++ Q+EYA LD + L Q+ H+
Sbjct: 132 LCKFNNIDKQEQTSDWGKRPLTEEQIEYAYLDCIYLAQVHWHL 174
>gi|306921707|dbj|BAJ17933.1| Werner syndrome, RecQ helicase-like [synthetic construct]
Length = 1432
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 82/160 (51%), Gaps = 17/160 (10%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG D EW P Y +G K+ KV+++Q+ S+ ++F + ++ V L +L++
Sbjct: 78 VVGFDMEWPPLYNRG-KLGKVALIQLCVSESKCYLFHISSMS-----VFPQGLKMLLENK 131
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPK----GGLSGLAEKILGA 451
+ K G + D +L + K++ L D+ N K+ K L+ L + +LG
Sbjct: 132 AVKKAGVGIEGDQWKLLRDFDIK--LKNFVELTDVAN--KKLKCTETWSLNSLVKHLLGK 187
Query: 452 GL--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L +K+ R SNW + PL+++Q YAA DA I+ ++
Sbjct: 188 QLLKDKSIRCSNWSKFPLTEDQKLYAATDAYAGFIIYRNL 227
>gi|169767462|ref|XP_001818202.1| exosome component 3'-5' exonuclease [Aspergillus oryzae RIB40]
gi|83766057|dbj|BAE56200.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391871959|gb|EIT81108.1| exosome 3'-5' exoribonuclease [Aspergillus oryzae 3.042]
Length = 760
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 95/220 (43%), Gaps = 16/220 (7%)
Query: 276 EKVDELCERYSLEGFLKT-REPEAGFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEG 334
EK E +R E ++ R PE+ + S + + +VD ++G+ + + ++
Sbjct: 179 EKSVESSDRNPYETEIRAARYPESTYAVSSPVPYQPWESTTATFVDTLEGVKEMLEELKS 238
Query: 335 CKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK-LAEDVPDVLDSCLTRILQ 393
K + ID E ++ VS+MQI++ + ++ D +K E++ L +
Sbjct: 239 AKEIAIDLE---HHDVHSYQGLVSLMQISTRDKDWVVDTLKPWREEL-----QMLNEVFA 290
Query: 394 SPGILKLGYNFQCDIKQLAHSYG--ELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGA 451
P ILK+ + DI L G + F Y PK L L +K +
Sbjct: 291 DPSILKVFHGSSMDIIWLQRDLGLYVVGMFDTYHAAC----ALNYPKRSLKFLLQKFVNF 346
Query: 452 GLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
+K + ++W RP+ + +YA D LL IF H+R+
Sbjct: 347 EADKRYQMADWRIRPIPEGMFDYARSDTHYLLHIFDHLRN 386
>gi|426359284|ref|XP_004046910.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
helicase [Gorilla gorilla gorilla]
Length = 1429
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 82/160 (51%), Gaps = 17/160 (10%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG D EW P Y +G K+ KV+++Q+ S+ ++F + ++ V L +L++
Sbjct: 78 VVGFDMEWPPLYNRG-KLGKVALIQLCVSESKCYLFHISSMS-----VFPQGLKMLLENK 131
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPK----GGLSGLAEKILGA 451
+ K G + D +L + K++ L D+ N K+ K L+ L + +LG
Sbjct: 132 AVKKAGVGIEGDQWKLLRDFDIK--LKNFVELTDVAN--KKLKCTETWSLNSLVKHLLGK 187
Query: 452 GL--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L +K+ R SNW + PL+++Q YAA DA I+ ++
Sbjct: 188 QLLKDKSIRCSNWSKFPLTEDQKLYAATDAYAGFIIYRNL 227
>gi|99032230|pdb|2FBT|A Chain A, Wrn Exonuclease
gi|99032231|pdb|2FBV|A Chain A, Wrn Exonuclease, Mn Complex
gi|99032232|pdb|2FBX|A Chain A, Wrn Exonuclease, Mg Complex
gi|99032233|pdb|2FBY|A Chain A, Wrn Exonuclease, Eu Complex
gi|99032234|pdb|2FC0|A Chain A, Wrn Exonuclease, Mn Dgmp Complex
Length = 205
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 85/160 (53%), Gaps = 17/160 (10%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG D EW P Y +G K+ KV+++Q+ S+ ++F + ++ V L +L++
Sbjct: 47 VVGFDMEWPPLYNRG-KLGKVALIQLCVSESKCYLFHVSSMS-----VFPQGLKMLLENK 100
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPK----GGLSGLAEKILGA 451
+ K G + D +L + +++ K++ L D+ N K+ K L+ L + +LG
Sbjct: 101 AVKKAGVGIEGDQWKLLRDF-DIK-LKNFVELTDVAN--KKLKCTETWSLNSLVKHLLGK 156
Query: 452 GL--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L +K+ R SNW + PL+++Q YAA DA I+ ++
Sbjct: 157 QLLKDKSIRCSNWSKFPLTEDQKLYAATDAYAGFIIYRNL 196
>gi|397521446|ref|XP_003830806.1| PREDICTED: Werner syndrome ATP-dependent helicase [Pan paniscus]
Length = 1405
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 82/160 (51%), Gaps = 17/160 (10%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG D EW P Y +G K+ KV+++Q+ S+ ++F + ++ V L +L++
Sbjct: 78 VVGFDMEWPPLYNRG-KLGKVALIQLCVSESKCYLFHISSMS-----VFPQGLKMLLENK 131
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPK----GGLSGLAEKILGA 451
+ K G + D +L + K++ L D+ N K+ K L+ L + +LG
Sbjct: 132 AVKKAGVGIEGDQWKLLRDFDIK--LKNFVELTDVAN--KKLKCTETWSLNSLVKHLLGK 187
Query: 452 GL--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L +K+ R SNW + PL+++Q YAA DA I+ ++
Sbjct: 188 QLLKDKSIRCSNWSKFPLTEDQKLYAATDAYAGFIIYRNL 227
>gi|288927674|ref|ZP_06421521.1| 3'-5' exonuclease domain protein [Prevotella sp. oral taxon 317
str. F0108]
gi|288330508|gb|EFC69092.1| 3'-5' exonuclease domain protein [Prevotella sp. oral taxon 317
str. F0108]
Length = 209
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 86/176 (48%), Gaps = 19/176 (10%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
KA+ + ++G+D E +P++ KG + + VS++Q+++ ++ F+F L + +
Sbjct: 39 KAVDFLLSRDILGVDTETRPSFKKG-ETHMVSLLQVSTSDVCFLFRLNHIG------ITP 91
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAE 446
+ R+L++ + +G + D+ L F +D+Q++ E G+ L+
Sbjct: 92 AILRLLENKAVPMVGLSLHDDMLSLHKRVAFTPGF-----FIDLQDLVGEL--GIEDLSL 144
Query: 447 KILGAGL-----NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
+ L A L +K +R +NW+ L+ Q YAALDA + ++ + Q D
Sbjct: 145 QKLYANLFHQKISKRQRLTNWDSDVLNDKQKAYAALDAWACINLYKEILRLKQSGD 200
>gi|346465417|gb|AEO32553.1| hypothetical protein [Amblyomma maculatum]
Length = 181
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 18/150 (12%)
Query: 356 KVSIMQIASDEMVFIFDLIKLAEDV-PDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHS 414
K +++Q+A + VFI D++KL ++ D L+ I S IL LGY D++ LA
Sbjct: 10 KSALIQLAVWDFVFILDVLKLETELQASDWDKLLSEIWSSHRILMLGYGIAEDLRLLAER 69
Query: 415 YGELE---------CFKHYEMLLDIQNVFKE--PK---GGLSGLAEKILGAGLNKTRRNS 460
+ C ++ D V K P+ GLS L LG LNK++R S
Sbjct: 70 VMQPNANLAQXXNLCNFTQKVRHDYPRVIKPVYPRRNCKGLSELTYLTLGLPLNKSQRCS 129
Query: 461 NWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
NWE+R L +Q+ D+ LLQI+ ++
Sbjct: 130 NWEKRSLRPSQI---VQDSYCLLQIYEELK 156
>gi|114619614|ref|XP_528104.2| PREDICTED: Werner syndrome ATP-dependent helicase [Pan troglodytes]
Length = 1432
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 82/160 (51%), Gaps = 17/160 (10%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG D EW P Y +G K+ KV+++Q+ S+ ++F + ++ V L +L++
Sbjct: 78 VVGFDMEWPPLYNRG-KLGKVALIQLCVSESKCYLFHISSMS-----VFPQGLKMLLENK 131
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPK----GGLSGLAEKILGA 451
+ K G + D +L + K++ L D+ N K+ K L+ L + +LG
Sbjct: 132 AVKKAGVGIEGDQWKLLRDFDIK--LKNFVELTDVAN--KKLKCTETWSLNSLVKHLLGK 187
Query: 452 GL--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L +K+ R SNW + PL+++Q YAA DA I+ ++
Sbjct: 188 QLLKDKSIRCSNWSKFPLTEDQKLYAATDAYAGFIIYRNL 227
>gi|119583828|gb|EAW63424.1| Werner syndrome, isoform CRA_a [Homo sapiens]
Length = 1405
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 82/160 (51%), Gaps = 17/160 (10%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG D EW P Y +G K+ KV+++Q+ S+ ++F + ++ V L +L++
Sbjct: 78 VVGFDMEWPPLYNRG-KLGKVALIQLCVSESKCYLFHVSSMS-----VFPQGLKMLLENK 131
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPK----GGLSGLAEKILGA 451
+ K G + D +L + K++ L D+ N K+ K L+ L + +LG
Sbjct: 132 AVKKAGVGIEGDQWKLLRDFDIK--LKNFVELTDVAN--KKLKCTETWSLNSLVKHLLGK 187
Query: 452 GL--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L +K+ R SNW + PL+++Q YAA DA I+ ++
Sbjct: 188 QLLKDKSIRCSNWSKFPLTEDQKLYAATDAYAGFIIYRNL 227
>gi|119583830|gb|EAW63426.1| Werner syndrome, isoform CRA_c [Homo sapiens]
Length = 1406
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 82/160 (51%), Gaps = 17/160 (10%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG D EW P Y +G K+ KV+++Q+ S+ ++F + ++ V L +L++
Sbjct: 78 VVGFDMEWPPLYNRG-KLGKVALIQLCVSESKCYLFHVSSMS-----VFPQGLKMLLENK 131
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPK----GGLSGLAEKILGA 451
+ K G + D +L + K++ L D+ N K+ K L+ L + +LG
Sbjct: 132 AVKKAGVGIEGDQWKLLRDFDIK--LKNFVELTDVAN--KKLKCTETWSLNSLVKHLLGK 187
Query: 452 GL--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L +K+ R SNW + PL+++Q YAA DA I+ ++
Sbjct: 188 QLLKDKSIRCSNWSKFPLTEDQKLYAATDAYAGFIIYRNL 227
>gi|225849884|ref|YP_002730118.1| DNA polymerase I [Persephonella marina EX-H1]
gi|225644858|gb|ACO03044.1| DNA polymerase I [Persephonella marina EX-H1]
Length = 584
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 92/179 (51%), Gaps = 16/179 (8%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKM--NKVSIMQIASDEMVFIFDLIK 375
++ ++D K++ + K + ID E + +K+ ++QI + +F++D+ +
Sbjct: 5 YITQIDEAVKSLEAFKEDKYLFIDTEVAVKSFEDIDFFNDKIRLIQIGNYSKIFVYDMFR 64
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKH--YEMLLDIQNV 433
+ + L +L++ G++ G+N + DIK L ++G F ++ ++ Q +
Sbjct: 65 IPQ-----FSEHLKELLENKGVI--GHNLKFDIKFLKTNFG---IFPQIVFDTMIASQLL 114
Query: 434 FKEP--KGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
++ K LS L+ ++ L+K+++ S W + L++ QL YAA D VL +IF +R
Sbjct: 115 SEDSREKHSLSALSYRLTDNHLDKSQQRSPWGIKNLTEEQLRYAAKDVQVLREIFPVLR 173
>gi|222825102|dbj|BAH22259.1| putative ribonuclease D [Wolbachia endosymbiont of Cadra cautella]
Length = 394
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 99/197 (50%), Gaps = 21/197 (10%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
K + ID E+ N + K+S++QI+ E FI D + VP++ S + +++ +
Sbjct: 22 KFIAIDTEFIRNNLTYYP--KLSLIQISYGEKSFIVDAL-----VPEIDLSFIKKMMLNQ 74
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEM-LLDIQNV-----FKEPKGGLSGLAEKIL 449
GI+K+ ++ + DI+ L L FK + D Q + G S + E+
Sbjct: 75 GIIKVFHSCRQDIESL------LTVFKCVPTPIFDTQVAAMFCHYYHDFIGYSKVVEQYQ 128
Query: 450 GAGLNKTR-RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV-RSCSQPTDVSEGHDKIEW 507
G L+K + +NS+W +RPLS++QL+YA D V L ++ + + +S +++E
Sbjct: 129 GIALDKIKAKNSDWLRRPLSEDQLDYAINDVVYLYDLYQILCNKLEESNRMSWFQEEMEL 188
Query: 508 KSYIVSHMDNPKKSKKR 524
I ++ +PK + +R
Sbjct: 189 LVDINKYLHSPKDAWRR 205
>gi|119583829|gb|EAW63425.1| Werner syndrome, isoform CRA_b [Homo sapiens]
Length = 1436
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 82/160 (51%), Gaps = 17/160 (10%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG D EW P Y +G K+ KV+++Q+ S+ ++F + ++ V L +L++
Sbjct: 78 VVGFDMEWPPLYNRG-KLGKVALIQLCVSESKCYLFHVSSMS-----VFPQGLKMLLENK 131
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPK----GGLSGLAEKILGA 451
+ K G + D +L + K++ L D+ N K+ K L+ L + +LG
Sbjct: 132 AVKKAGVGIEGDQWKLLRDFDIK--LKNFVELTDVAN--KKLKCTETWSLNSLVKHLLGK 187
Query: 452 GL--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L +K+ R SNW + PL+++Q YAA DA I+ ++
Sbjct: 188 QLLKDKSIRCSNWSKFPLTEDQKLYAATDAYAGFIIYRNL 227
>gi|89901599|ref|YP_524070.1| 3'-5' exonuclease [Rhodoferax ferrireducens T118]
gi|89346336|gb|ABD70539.1| 3'-5' exonuclease [Rhodoferax ferrireducens T118]
Length = 198
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 19/163 (11%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRI 391
+ V G D E KP + K + I+Q+A+ + ++F L A + + +
Sbjct: 43 LSAATVWGFDTESKPTFFKDQVSDGPHIVQLATLDQAWVFQLHDPA------CRAVVAHL 96
Query: 392 LQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKG-----GLSGLAE 446
L PG K G+ D K++ G +E +L++ VF++ +G G+ G
Sbjct: 97 LALPGFTKAGFGLGDDRKRIQSKLG-VEVVG----MLELNTVFRQ-RGYRKDMGVKGAVA 150
Query: 447 KILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
+ K+++ SNW LSQ QL YAA DA +++FH
Sbjct: 151 VLFNQRFIKSKKATTSNWALPSLSQAQLVYAANDAYAAVRVFH 193
>gi|353327707|ref|ZP_08970034.1| ribonuclease D [Wolbachia endosymbiont wVitB of Nasonia
vitripennis]
Length = 376
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 99/203 (48%), Gaps = 33/203 (16%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
K + ID E+ N + K+S++QI+ E FI D + VP++ S + +++ +
Sbjct: 6 KFIAIDTEFIRNNLTYYP--KLSLIQISYGEKSFIVDAL-----VPEIDLSFIKKMMLNQ 58
Query: 396 GILKLGYNFQCDIKQLAHSY------------GELECFKHYEMLLDIQNVFKEPKGGLSG 443
GI+K+ ++ + DI+ L + + C +++ + G S
Sbjct: 59 GIIKVFHSCRQDIESLLTVFKCVPTPIFDTQVAAMFCHYYHDFI------------GYSK 106
Query: 444 LAEKILGAGLNKTR-RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV-RSCSQPTDVSEG 501
+ E+ G L+K + +NS+W +RPLS++QL+YA D V L ++ + + +S
Sbjct: 107 VVEQYQGIALDKIKAKNSDWLRRPLSEDQLDYAINDVVYLYDLYQILCNKLEESNRMSWF 166
Query: 502 HDKIEWKSYIVSHMDNPKKSKKR 524
+++E I ++ +PK + +R
Sbjct: 167 QEEMELLVDINKYLHSPKDAWRR 189
>gi|1280208|gb|AAC41981.1| unnamed protein product [Homo sapiens]
gi|3719421|gb|AAC63361.1| WRN [Homo sapiens]
gi|6272686|gb|AAF06162.1| WRN [Homo sapiens]
gi|60461921|gb|AAX21098.1| Werner syndrome helicase [Homo sapiens]
Length = 1432
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 82/160 (51%), Gaps = 17/160 (10%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG D EW P Y +G K+ KV+++Q+ S+ ++F + ++ V L +L++
Sbjct: 78 VVGFDMEWPPLYNRG-KLGKVALIQLCVSESKCYLFHVSSMS-----VFPQGLKMLLENK 131
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPK----GGLSGLAEKILGA 451
+ K G + D +L + K++ L D+ N K+ K L+ L + +LG
Sbjct: 132 AVKKAGVGIEGDQWKLLRDFDIK--LKNFVELTDVAN--KKLKCTETWSLNSLVKHLLGK 187
Query: 452 GL--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L +K+ R SNW + PL+++Q YAA DA I+ ++
Sbjct: 188 QLLKDKSIRCSNWSKFPLTEDQKLYAATDAYAGFIIYRNL 227
>gi|422299641|ref|ZP_16387202.1| ribonuclease D [Pseudomonas avellanae BPIC 631]
gi|407988396|gb|EKG30945.1| ribonuclease D [Pseudomonas avellanae BPIC 631]
Length = 377
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 12/177 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI + ++ D
Sbjct: 4 DIHWIRDDDSLARHCAQWQSLPFVALDTE----FMRVDTFYPIAALLQIGDGQSAWLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + + P L+ +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LLINDWAP------LSALLENPDVIKVVHACSEDLEVLLRLTGSLPV-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
G S L +++L L K S+W QRPLS Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLNIDLPKGETRSDWLQRPLSDTQISYAAEDAVHLAELFAILR 169
>gi|345781559|ref|XP_539984.3| PREDICTED: Werner syndrome ATP-dependent helicase [Canis lupus
familiaris]
Length = 1412
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 13/158 (8%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG D EW P Y K K ++V+++Q+ S+ ++F + ++ V L +L++
Sbjct: 78 VVGFDMEWPPVYTKR-KPSRVALIQLCVSENKCYLFHISSMS-----VFPQGLKMLLENE 131
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQN--VFKEPKGGLSGLAEKILGAGL 453
I K G + D ++L + +++ K++ L D+ N + L+GL + + G L
Sbjct: 132 AIKKAGVGIKGDQRKLLCDF-DID-LKNFVELTDVANEKLKCTETWSLNGLVKHLFGKQL 189
Query: 454 NKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
K R R SNW PL+++Q YAA DA L I+ +
Sbjct: 190 LKDRSIRCSNWGDFPLTEDQKLYAATDAYAGLIIYQKL 227
>gi|110735439|ref|NP_000544.2| Werner syndrome ATP-dependent helicase [Homo sapiens]
gi|322510082|sp|Q14191.2|WRN_HUMAN RecName: Full=Werner syndrome ATP-dependent helicase; AltName:
Full=DNA helicase, RecQ-like type 3; Short=RecQ3;
AltName: Full=Exonuclease WRN; AltName: Full=RecQ
protein-like 2
gi|37953299|gb|AAR05448.1| Werner syndrome [Homo sapiens]
Length = 1432
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 82/160 (51%), Gaps = 17/160 (10%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG D EW P Y +G K+ KV+++Q+ S+ ++F + ++ V L +L++
Sbjct: 78 VVGFDMEWPPLYNRG-KLGKVALIQLCVSESKCYLFHVSSMS-----VFPQGLKMLLENK 131
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPK----GGLSGLAEKILGA 451
+ K G + D +L + K++ L D+ N K+ K L+ L + +LG
Sbjct: 132 AVKKAGVGIEGDQWKLLRDFDIK--LKNFVELTDVAN--KKLKCTETWSLNSLVKHLLGK 187
Query: 452 GL--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L +K+ R SNW + PL+++Q YAA DA I+ ++
Sbjct: 188 QLLKDKSIRCSNWSKFPLTEDQKLYAATDAYAGFIIYRNL 227
>gi|398989100|ref|ZP_10692585.1| ribonuclease D [Pseudomonas sp. GM24]
gi|399012536|ref|ZP_10714856.1| ribonuclease D [Pseudomonas sp. GM16]
gi|398115369|gb|EJM05153.1| ribonuclease D [Pseudomonas sp. GM16]
gi|398148360|gb|EJM37041.1| ribonuclease D [Pseudomonas sp. GM24]
Length = 377
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + + L + + V +D E +++ ++ ++Q+ + ++ D
Sbjct: 4 DIHWIRDNESLAQFCAEWQQLPFVALDTE----FMRVDTFYPIAGLLQVGDGKRAYLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + P L +L++P +LK+ + D++ L G L ++ L +
Sbjct: 60 LTINAWQP------LAALLENPAVLKVLHACSEDLEVLLRLTGSLPA-PMFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++LG L K S+W QRPLS Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLGIELPKGETRSDWLQRPLSDTQISYAAEDAVHLAEVFVQLRP 170
>gi|330789845|ref|XP_003283009.1| hypothetical protein DICPUDRAFT_146576 [Dictyostelium purpureum]
gi|325087081|gb|EGC40462.1| hypothetical protein DICPUDRAFT_146576 [Dictyostelium purpureum]
Length = 662
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 83/155 (53%), Gaps = 12/155 (7%)
Query: 337 VVGIDCEW-KPNYVKGCK--MNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQ 393
++G D EW N + C+ +KV+++Q++S V+ LI++++ +P + S L +IL
Sbjct: 171 IIGFDAEWSNQNQYQECEGYPHKVALIQLSSKTDVY---LIQISQ-MPTIPQS-LEQILV 225
Query: 394 SPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGL 453
P ++K+G D + S+ + K L+ I + GL+ LA +L A +
Sbjct: 226 DPRLIKVGVAISQDAATIFSSFSIVT--KGCVDLVPIGRLTNYQGNGLASLALNVLNANI 283
Query: 454 NKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
+K R S+WE + L+ Q+ YAA+DA + +IF
Sbjct: 284 DKNNLIRCSHWENKNLTSEQVMYAAIDAWIGREIF 318
>gi|312375236|gb|EFR22650.1| hypothetical protein AND_14417 [Anopheles darlingi]
Length = 782
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 14/167 (8%)
Query: 322 VDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVP 381
V LH+ H + KV+G DCEW N + V+++Q+AS + LI+L +
Sbjct: 65 VSKLHR---HCQEYKVLGFDCEWVSNQ---GQRRPVALLQLASHRGLCA--LIRLC--MI 114
Query: 382 DVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGL 441
+ L L +L I+K+G + D + L Y +L+ ++ + EP G+
Sbjct: 115 NKLPQELYDLLNDDNIIKVGVSPYEDARLLREDY-KLKVESTLDLRFMAERAGLEP-FGI 172
Query: 442 SGLAEKILGAGLNK--TRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
+ LA ++LG L+K R S+WE LS Q++YAA DA V +++F
Sbjct: 173 ARLANEVLGLTLDKHWKIRCSDWEAPDLSDRQIKYAASDAHVAVELF 219
>gi|198454637|ref|XP_001359658.2| GA19827 [Drosophila pseudoobscura pseudoobscura]
gi|198132885|gb|EAL28808.2| GA19827 [Drosophila pseudoobscura pseudoobscura]
Length = 578
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 325 LHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDE-MVFIFDLIKLAEDVPDV 383
L++ H + KVVG DCEW G V+++Q++S + + +F L + + D+
Sbjct: 63 LNELRTHCQSFKVVGFDCEW---ITVGGSRRPVALLQLSSHKGLCALFRLCTMRQIPKDL 119
Query: 384 LDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSG 443
D +L+ ++K+G Q D K+LAH YG + ++ +P+G L
Sbjct: 120 RD-----LLEDEAVIKVGVAPQDDAKKLAHDYG-VGVASTLDLRFLAVMAGHKPEG-LGK 172
Query: 444 LAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
LA+ + L+K R SNWE + L +Q++YAA DA+ + IF + S +P +
Sbjct: 173 LAKTHVDFVLDKNWRLACSNWEAKQLETSQIDYAANDALAAVAIFQKLSSDLEPRN 228
>gi|315608200|ref|ZP_07883192.1| 3'-5' exonuclease domain protein [Prevotella buccae ATCC 33574]
gi|315250169|gb|EFU30166.1| 3'-5' exonuclease domain protein [Prevotella buccae ATCC 33574]
Length = 215
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 89/187 (47%), Gaps = 19/187 (10%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
I+ + D KA+ ++ ++G D E KP + +G + +KV+++Q+A+ + +F L
Sbjct: 26 IVTIISPDDTKKAVDYLLSSDILGFDTETKPVFRRG-QHSKVALLQVANRDACILFRLNY 84
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEM--LLDIQNV 433
+ S + R+L+ + K+G ++ DI L K +++ +D+Q++
Sbjct: 85 TG------MTSDIIRLLEDNTVKKIGLSWHDDILSLQRR-------KPFQVGSFIDLQDI 131
Query: 434 FKE---PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
+ L L + ++K +R +NWE L +Q +YAA DA ++++ +
Sbjct: 132 VGDLGIEDRSLQKLYANLFQEKISKNQRLTNWEADVLKDSQKQYAATDAWTCIKLYEEIE 191
Query: 491 SCSQPTD 497
+ D
Sbjct: 192 RLKRTGD 198
>gi|422631988|ref|ZP_16697165.1| ribonuclease D [Pseudomonas syringae pv. pisi str. 1704B]
gi|330941897|gb|EGH44622.1| ribonuclease D [Pseudomonas syringae pv. pisi str. 1704B]
Length = 377
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI + ++ D
Sbjct: 4 DIHWIRDDDSLARHCAQWQSLPFVALDTE----FMRVDTFYPIAALLQIGDGQSAWLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + + P L+ +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LLINDWRP------LSALLENPDVIKVLHACSEDLEVLLRLTGSLPV-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++L L K S+W QRPLS+ Q+ YAA DAV L ++F +R+
Sbjct: 113 NLGFSMGYSRLVQEVLDIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAELFTILRA 170
>gi|344304844|gb|EGW35076.1| hypothetical protein SPAPADRAFT_53425 [Spathaspora passalidarum
NRRL Y-27907]
Length = 756
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 83/186 (44%), Gaps = 16/186 (8%)
Query: 309 KELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCE---WKPNYVKGCKMNKVSIMQIASD 365
K+ + IWVD V+ L K + ++ + +D E ++ Y C +MQI++
Sbjct: 219 KDWSTTEAIWVDTVEELTKMVTVLQSSTEIAVDLEHHDYRTYYGIVC------LMQISNR 272
Query: 366 EMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYE 425
+ +I D + L +D+ + L + P I+K+ + DI L G L ++
Sbjct: 273 DQDWIIDTLALRDDL-----TVLNTVFTDPSIVKVFHGAFMDIIWLQRDLG-LYIVSLFD 326
Query: 426 MLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+N+ PK L+ L E +K + ++W RPLS + YA D LL I
Sbjct: 327 TYCASKNL-GFPKHSLAYLLETFAHFKTSKKYQLADWRIRPLSHPMMAYARSDTHFLLNI 385
Query: 486 FHHVRS 491
+ +R+
Sbjct: 386 YDQLRN 391
>gi|351727341|ref|NP_001238437.1| uncharacterized protein LOC100527339 [Glycine max]
gi|255632121|gb|ACU16413.1| unknown [Glycine max]
Length = 208
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 21/158 (13%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
++VG+D EW K KM KV+I+Q+ + I L + +++P L S L
Sbjct: 56 RIVGLDTEWTT--AKKPKM-KVAILQLCIENKCLIIQLFHM-DNIPQSLRS----FLMDS 107
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE------PKGGLSGLAEKIL 449
+G D++ L + YG LEC K +D+ + KE G L LA++++
Sbjct: 108 NFEFVGVGVINDLRMLKNDYG-LECNKG----IDVSLLAKEKWPHRISSGALKYLAKELV 162
Query: 450 GAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQI 485
G + K++ S W+ + L+Q Q+EYA +DA +I
Sbjct: 163 GLEMEKSKAVCTSEWQSKELTQTQIEYACIDAYASFKI 200
>gi|398871648|ref|ZP_10626961.1| ribonuclease D [Pseudomonas sp. GM74]
gi|398205901|gb|EJM92679.1| ribonuclease D [Pseudomonas sp. GM74]
Length = 377
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI + D
Sbjct: 4 DIHWIRDNDSLGRLCAEWQQLPFVALDTE----FMRVDTFYPIAGLLQIGDGVRACLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + P L +L++P +LK+ + D++ L G L ++ L +
Sbjct: 60 LTIDNWQP------LATLLENPAVLKVVHACSEDLEVLLRLTGSLPA-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++LG L K S+W QRPLS+ Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLGIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAEVFVKLRP 170
>gi|195156982|ref|XP_002019375.1| GL12271 [Drosophila persimilis]
gi|194115966|gb|EDW38009.1| GL12271 [Drosophila persimilis]
Length = 578
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 325 LHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDE-MVFIFDLIKLAEDVPDV 383
L++ H + KVVG DCEW G V+++Q++S + + +F L + + D+
Sbjct: 63 LNELRTHCQSFKVVGFDCEW---ITVGGSRRPVALLQLSSHKGLCALFRLCTMRQIPKDL 119
Query: 384 LDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSG 443
D +L+ ++K+G Q D K+LAH YG + ++ +P+G L
Sbjct: 120 RD-----LLEDEAVIKVGVAPQDDAKKLAHDYG-VGVASTLDLRFLAVMAGHKPEG-LGK 172
Query: 444 LAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
LA+ + L+K R SNWE + L +Q++YAA DA+ + IF + S +P +
Sbjct: 173 LAKTHVDFVLDKNWRLACSNWEAKQLETSQIDYAANDALAAVAIFQKLSSDLEPRN 228
>gi|220917449|ref|YP_002492753.1| 3'-5' exonuclease [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955303|gb|ACL65687.1| 3'-5' exonuclease [Anaeromyxobacter dehalogenans 2CP-1]
Length = 288
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 84/170 (49%), Gaps = 13/170 (7%)
Query: 317 IWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKL 376
++V + D L + + + G +V+ +D E +V +V ++Q+++ F+ D I +
Sbjct: 10 VFVSDPDALSRLLDALAGERVLALDTESNSFHVY---RERVCLLQLSTRAQDFVVDPISV 66
Query: 377 AEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE 436
DV L IL G + + D++ L YG + ++ ++ + + +
Sbjct: 67 -----DV--RPLGEILCD-GREVVLHGADYDVRCLHREYG-WRIPRLFDTMIAARRLGR- 116
Query: 437 PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
P GLS L E G L+K + S+W +RPL+ +QL YA+LD LL +F
Sbjct: 117 PGLGLSALVEAHFGVRLSKAFQRSDWGRRPLTPDQLAYASLDTHFLLPLF 166
>gi|402308871|ref|ZP_10827874.1| 3'-5' exonuclease [Prevotella sp. MSX73]
gi|400374840|gb|EJP27754.1| 3'-5' exonuclease [Prevotella sp. MSX73]
Length = 215
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 89/187 (47%), Gaps = 19/187 (10%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
I+ + D KA+ ++ ++G D E KP + +G + +KV+++Q+A+ + +F L
Sbjct: 26 IVTIISPDDTKKAVDYLLSSDILGFDTETKPVFRRG-QHSKVALLQVANRDACILFRLNY 84
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEM--LLDIQNV 433
+ S + R+L+ + K+G ++ DI L K +++ +D+Q++
Sbjct: 85 TG------MTSDIIRLLEDRTVKKIGLSWHDDILSLQRR-------KPFQVGSFIDLQDI 131
Query: 434 FKE---PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
+ L L + ++K +R +NWE L +Q +YAA DA ++++ +
Sbjct: 132 VGDLGIEDRSLQKLYANLFQEKISKNQRLTNWEADVLKDSQKQYAATDAWTCIKLYEEIE 191
Query: 491 SCSQPTD 497
+ D
Sbjct: 192 RLKRTGD 198
>gi|388582483|gb|EIM22788.1| ribonuclease H-like protein [Wallemia sebi CBS 633.66]
Length = 337
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 86/179 (48%), Gaps = 19/179 (10%)
Query: 338 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGI 397
VG D EWK ++ K K + +I+Q+ D+++ + L ++E +P+ L ++L
Sbjct: 43 VGFDMEWKVDFRKSAKQRRTAIVQLCDDKLILVLHLHHMSE-IPN----ELIKLLTDKQR 97
Query: 398 LKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKG------GLSGLAEKILGA 451
K+G N D ++ + + +++ E+ +++ G L L E +L
Sbjct: 98 YKIGVNVSNDGRKFYNDF-KIQLNSLLELTYLAKSIHSAELGSNRVLISLDKLTEFLLQE 156
Query: 452 GLNK-TRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD-----VSEGHDK 504
L+K T R +WE + L+ Q+EYAA D Q+F + S S T+ V + +DK
Sbjct: 157 RLDKGTERVGDWENK-LNWKQIEYAANDVYASYQMFDKLSSQSTETNFDKFLVDKDYDK 214
>gi|398993941|ref|ZP_10696872.1| ribonuclease D [Pseudomonas sp. GM21]
gi|398133446|gb|EJM22646.1| ribonuclease D [Pseudomonas sp. GM21]
Length = 377
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI ++ D
Sbjct: 4 DIHWIRDNDSLGQFCAEWQQLPFVALDTE----FMRVDTFYPIAGLLQIGDGVRAYLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + P L +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LTIDNWQP------LAALLENPAVVKVVHACSEDLEVLLRLTGSLPA-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++LG L K S+W QRPLS Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLGIDLPKGETRSDWLQRPLSDTQISYAAEDAVHLAEVFVQLRP 170
>gi|373500567|ref|ZP_09590947.1| hypothetical protein HMPREF9140_01065 [Prevotella micans F0438]
gi|371953370|gb|EHO71197.1| hypothetical protein HMPREF9140_01065 [Prevotella micans F0438]
Length = 213
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 15/167 (8%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
KA+ ++ ++GID E +P + KG +KV+++Q+ ++ F+F L + +P
Sbjct: 37 KAVDYLLAQDILGIDTETRPVFKKG-HHHKVALLQVCDRKVCFLFRLNIIG--IP----P 89
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV---FKEPKGGLSG 443
+ R+L+ I K+G + D+ L H + E +D+QN+ F L
Sbjct: 90 SVIRLLEDTTIPKIGLSLTDDMLMLHHR-AKFEPGN----FIDLQNIVEQFGIEDKSLQK 144
Query: 444 LAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
L I G + K + SNWE + L+ Q Y A DA ++I+ ++
Sbjct: 145 LYANIFGERIVKREQLSNWENQVLTDKQKIYGATDAWTCIRIYERLQ 191
>gi|365093477|ref|ZP_09330542.1| 3'-5' exonuclease [Acidovorax sp. NO-1]
gi|363414357|gb|EHL21507.1| 3'-5' exonuclease [Acidovorax sp. NO-1]
Length = 240
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 25/159 (15%)
Query: 339 GIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRI---LQSP 395
G D E KP +V+ + I+Q+A+ E ++F L C R+ L
Sbjct: 73 GFDTESKPTFVRDEPSDGPHIVQLATLERAWVFQLHN---------PGCRARVAELLALR 123
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKG-----GLSGLAEKILG 450
G+ K G+ D K++ H G +L++ VF++ +G G+ G +
Sbjct: 124 GVTKAGFGLGDDTKRIQHKLGVQPA-----DVLELNTVFRQ-QGYRKDMGVKGAVAVLFN 177
Query: 451 AGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
K+++ SNW L++ QL YAA DA L++FH
Sbjct: 178 KRFIKSKKAATSNWANARLTEAQLVYAANDAWAALRVFH 216
>gi|338211062|ref|YP_004655113.1| 3'-5' exonuclease [Runella slithyformis DSM 19594]
gi|336304879|gb|AEI47981.1| 3'-5' exonuclease [Runella slithyformis DSM 19594]
Length = 383
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 31/173 (17%)
Query: 323 DGLHKAICHIEGCKVVGIDCEWKPN-YVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVP 381
+ K + H+ G + ID E+ N Y G + ++QIA+ + ++ D +P
Sbjct: 11 EEFEKVVKHLSGLEAFAIDTEFDHNHYAYGFTL---CLIQIAAPDTCYLIDPF----SIP 63
Query: 382 DVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEP---- 437
D+ + L R+L+ K+ ++ D++ L H +G C +N+F
Sbjct: 64 DL--TSLWRVLEDERSEKVFHDCGEDLR-LLHLHG---C--------SPRNIFDTSVAAK 109
Query: 438 -----KGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
K GLS + ++LG +K ++ SNW +RPL QLEYAA D + LL +
Sbjct: 110 MLSFEKIGLSSVLNELLGVESSKKKQQSNWLKRPLLPLQLEYAATDVIHLLAL 162
>gi|242053889|ref|XP_002456090.1| hypothetical protein SORBIDRAFT_03g030280 [Sorghum bicolor]
gi|241928065|gb|EES01210.1| hypothetical protein SORBIDRAFT_03g030280 [Sorghum bicolor]
Length = 239
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 78/160 (48%), Gaps = 21/160 (13%)
Query: 337 VVGIDCEWKP--NYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQS 394
+VG+D EW+ ++ G + N+++++Q+ +F + A+ VP + L L +
Sbjct: 58 IVGLDTEWRVVVSHDDGYRDNRMAVLQLCVGHRCLVFQTVH-ADYVP----AALRAFLAN 112
Query: 395 PGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE-------PKGGLSGLAEK 447
P +G + D+++L +C +D+++V E + GL L +
Sbjct: 113 PDHRFVGVSVDGDVERL-----YCDCKILVATPVDLRHVAAEVLSRPELRRAGLKALVRE 167
Query: 448 ILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQI 485
++G + K + S W +RPLS Q+ YAA+DA V ++
Sbjct: 168 VMGVVMEKPKHVTMSRWSRRPLSPEQVRYAAIDAFVSYEV 207
>gi|288925838|ref|ZP_06419769.1| 3'-5' exonuclease domain protein [Prevotella buccae D17]
gi|288337493|gb|EFC75848.1| 3'-5' exonuclease domain protein [Prevotella buccae D17]
Length = 212
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 89/187 (47%), Gaps = 19/187 (10%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
I+ + D KA+ ++ ++G D E KP + +G + +KV+++Q+A+ + +F L
Sbjct: 26 IVTIISPDDTKKAVDYLLSSDILGFDTETKPVFRRG-QHSKVALLQVANRDACILFRLNY 84
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEM--LLDIQNV 433
+ S + R+L+ + K+G ++ DI L K +++ +D+Q++
Sbjct: 85 TG------MTSDIIRLLEDRTVKKIGLSWHDDILSLQRR-------KPFQVGSFIDLQDI 131
Query: 434 FKE---PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
+ L L + ++K +R +NWE L +Q +YAA DA ++++ +
Sbjct: 132 VGDLGIEDRSLQKLYANLFQEKISKNQRLTNWEADVLKDSQKQYAATDAWTCIKLYEEIE 191
Query: 491 SCSQPTD 497
+ D
Sbjct: 192 RLKRTGD 198
>gi|440907539|gb|ELR57678.1| Werner syndrome ATP-dependent helicase [Bos grunniens mutus]
Length = 1430
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG D EW P Y KG +++V+++Q+ ++ ++F + ++ L +L++
Sbjct: 76 VVGFDIEWPPAYKKGT-LSRVALIQLCVAESKCYLFHISSMSG-----FPQGLKMLLENE 129
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEP-----KGGLSGLAEKILG 450
I K G + D +L + + + ++++ +V E L+GL + + G
Sbjct: 130 AIKKAGVGIEQDQWKLLRDFD-----INLKSIVELTDVANEKLKCIETWSLNGLVKYLFG 184
Query: 451 AGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDV 498
L K R R SNW + PL+++Q YAA DA I+ + + S P +
Sbjct: 185 KQLLKDRSIRCSNWSRFPLTEDQKVYAATDAYAGFIIYQKLANLSDPVQI 234
>gi|424071287|ref|ZP_17808713.1| ribonuclease D [Pseudomonas syringae pv. avellanae str. ISPaVe037]
gi|407999220|gb|EKG39607.1| ribonuclease D [Pseudomonas syringae pv. avellanae str. ISPaVe037]
Length = 377
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI + ++ D
Sbjct: 4 DIHWIRDDDSLARHCAQWQSLPFVALDTE----FMRVDTFYPIAALLQIGDGQSAWLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + + P L+ +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LLINDWRP------LSALLENPDVIKVVHACSEDLEVLLRLTGSLPV-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++L L K S+W QRPLS+ Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLDIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAELFTILRP 170
>gi|358389648|gb|EHK27240.1| hypothetical protein TRIVIDRAFT_229052 [Trichoderma virens Gv29-8]
Length = 628
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 23/167 (13%)
Query: 337 VVGIDCEWKPNYVK---GCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQ 393
V+G+D EW + K G + N VS++QIAS + + + + D D+L +I+
Sbjct: 218 VIGLDLEWM-KFAKRTDGARQN-VSLIQIASPSRIALIH-VAVFSDKEDLLGPSFRKIMD 274
Query: 394 SPGILKLGYNFQCDIKQLAHSYG-------ELE-CFKHYEMLLDIQNVFKEPKGGLSGLA 445
+P + K+G N D +L + G EL ++ + L + N+ + GL LA
Sbjct: 275 NPNVSKVGVNIVPDCTRLKNHLGVTVRGIFELSHLYRVVKFLPEQPNLVHK---GLVSLA 331
Query: 446 EKI-----LGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
++ L + R NW +R LS Q++YAA DA LQ+++
Sbjct: 332 TQVEDQLLLPLYKGQMVRTGNWMRR-LSTQQIDYAASDAYAGLQLYY 377
>gi|422664872|ref|ZP_16724745.1| ribonuclease D [Pseudomonas syringae pv. aptata str. DSM 50252]
gi|330975291|gb|EGH75357.1| ribonuclease D [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 377
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI + ++ D
Sbjct: 4 DIHWIRDDDSLARHCAQWQSLPFVALDTE----FMRVDTFYPIAALLQIGDGQSAWLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + + P L+ +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LLINDWRP------LSALLENPDVIKVVHACSEDLEVLLRLTGSLPV-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++L L K S+W QRPLS+ Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLDIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAELFTILRP 170
>gi|424066641|ref|ZP_17804105.1| ribonuclease D [Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|440719626|ref|ZP_20900051.1| ribonuclease D [Pseudomonas syringae BRIP34876]
gi|440728871|ref|ZP_20909073.1| ribonuclease D [Pseudomonas syringae BRIP34881]
gi|443644899|ref|ZP_21128749.1| Ribonuclease D [Pseudomonas syringae pv. syringae B64]
gi|408002098|gb|EKG42362.1| ribonuclease D [Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|440360654|gb|ELP97917.1| ribonuclease D [Pseudomonas syringae BRIP34881]
gi|440367480|gb|ELQ04542.1| ribonuclease D [Pseudomonas syringae BRIP34876]
gi|443284916|gb|ELS43921.1| Ribonuclease D [Pseudomonas syringae pv. syringae B64]
Length = 377
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI + ++ D
Sbjct: 4 DIHWIRDDDSLARHCAQWQSLPFVALDTE----FMRVDTFYPIAALLQIGDGQSAWLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + + P L+ +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LLINDWRP------LSALLENPDVIKVVHACSEDLEVLLRLTGSLPV-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++L L K S+W QRPLS+ Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLDIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAELFTILRP 170
>gi|126175491|ref|YP_001051640.1| 3'-5' exonuclease [Shewanella baltica OS155]
gi|386342237|ref|YP_006038603.1| 3'-5' exonuclease [Shewanella baltica OS117]
gi|125998696|gb|ABN62771.1| 3'-5' exonuclease [Shewanella baltica OS155]
gi|334864638|gb|AEH15109.1| 3'-5' exonuclease [Shewanella baltica OS117]
Length = 315
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 89/186 (47%), Gaps = 13/186 (6%)
Query: 291 LKTREPEAGFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVK 350
L TR +A +++ +E ++ E D + + ++ +V+G D E + ++ +
Sbjct: 90 LATRIDDADMAALTAFEFQQIHIE-VVQPSEFDAV---VARLQAEQVLGFDTETRASFER 145
Query: 351 GCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQ 410
G + + +S++QIA+ + ++F L E + L +L+ ILK+G + D +
Sbjct: 146 GVQ-HPLSLIQIATADACYLFQHAILGEQF-----TQLKTVLEDENILKVGVGLRSDAQA 199
Query: 411 LAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRN--SNWEQRPLS 468
L +G + ++ + + E + G L +LG ++K ++ SNW+ PLS
Sbjct: 200 LKRQWG-INVASKLDLNWALAQLGAEKEMGTRQLVATLLGTRIDKPKKITLSNWQHVPLS 258
Query: 469 QNQLEY 474
Q++Y
Sbjct: 259 GAQIDY 264
>gi|302187116|ref|ZP_07263789.1| ribonuclease D [Pseudomonas syringae pv. syringae 642]
Length = 377
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI + ++ D
Sbjct: 4 DIHWIRDDDSLARHCAQWQSLPFVALDTE----FMRVDTFYPIAALLQIGDGQSAWLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + + P L+ +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LLINDWRP------LSALLENPDVIKVVHACSEDLEVLLRLTGSLPV-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++L L K S+W QRPLS+ Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLDIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAELFTILRP 170
>gi|427726009|ref|YP_007073286.1| 3'-5' exonuclease [Leptolyngbya sp. PCC 7376]
gi|427357729|gb|AFY40452.1| 3'-5' exonuclease [Leptolyngbya sp. PCC 7376]
Length = 306
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 18/179 (10%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASD---EMVFIFDLI 374
++ D + AI ++ ++ +D E K ++ + I ++D E V IFD++
Sbjct: 3 YLQNPDDIIAAIARLKFAPILWVDTEVADFRSKQPHLSLIQISANSADLTGEQVLIFDVL 62
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGE-----LECFKHYEMLLD 429
D P++++ + I+ I K+ +N D K L + + LE K L
Sbjct: 63 ----DRPELVEHFIQEIMVDEAIAKVFHNAAFDRKYLGKTKAKNIICTLELAKKIPYYL- 117
Query: 430 IQNVFKEPKGGLSGLAEKILG-AGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
+P L LAE + ++K + S W RPLS QLEYA LD V Q+ H
Sbjct: 118 ----APKPDNSLKSLAEHLCHFPKVDKELQGSEWGDRPLSAAQLEYAKLDPVYTAQVHH 172
>gi|134080969|emb|CAK41483.1| unnamed protein product [Aspergillus niger]
Length = 428
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 80/168 (47%), Gaps = 22/168 (13%)
Query: 336 KVVGIDCEWKPNYVK-GCKMNKVSIMQIASDEMVFIFD--LIKLAEDVPDVLDSCLTRIL 392
K++G D EWK + VS++QIA+ E + +F L + + D++ L +I+
Sbjct: 220 KILGFDMEWKAQASAWNSIQDNVSLIQIANRERIALFHVALFRPGRKISDLVPPSLKQII 279
Query: 393 QSPGILKLGYNFQCDIKQL-------AHSYGELECFKHYEMLL-----DIQNVFKEPKGG 440
+SP I KLG + + D +L AH EL H L+ + + + K P
Sbjct: 280 ESPDITKLGVSIKADCTRLRKYLKVDAHGIFELS---HLHKLVKYCQTNPKLINKRP-VN 335
Query: 441 LSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
LS E+ LG L K R S+W LS Q++YAA D+ + +F
Sbjct: 336 LSEQVEEHLGLPLEKAEDVRCSDWTVS-LSYRQVQYAASDSYACICLF 382
>gi|422619719|ref|ZP_16688406.1| ribonuclease D [Pseudomonas syringae pv. japonica str. M301072]
gi|330900086|gb|EGH31505.1| ribonuclease D [Pseudomonas syringae pv. japonica str. M301072]
Length = 377
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI + ++ D
Sbjct: 4 DIHWIRDDDSLARHCAQWQSLPFVALDTE----FMRVDTFYPIAALLQIGDGQSAWLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + + P L+ +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LLINDWRP------LSALLENPDVIKVVHACSEDLEVLLRLTGSLPV-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++L L K S+W QRPLS+ Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLDIDLPKGETRSDWLQRPLSETQITYAAEDAVHLAELFTILRP 170
>gi|292617367|ref|XP_697980.4| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Danio
rerio]
Length = 1361
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 80/162 (49%), Gaps = 19/162 (11%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VG D EW P++ KG K KV+++Q+ AS++ ++F + ++ P L L+
Sbjct: 66 AVGFDLEWPPSFTKG-KTKKVAMVQLCASEDKCYLFHISSMSGFPPG-----LKMFLEDE 119
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEP-----KGGLSGLAEKILG 450
I+K+G + D +L Y + ++D+ ++ E K L GL + +L
Sbjct: 120 NIMKVGVGIEGDKWKLLSDYD-----IKLKNIVDLSDLANEKLRCCEKWSLDGLVKHLLK 174
Query: 451 AGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
L K + R S+W+ L+++Q YAA DA L I+ ++
Sbjct: 175 KQLFKDKLVRCSHWDDFSLTEDQKRYAATDAYAGLLIYQKLQ 216
>gi|159127645|gb|EDP52760.1| exosome complex exonuclease Rrp6, putative [Aspergillus fumigatus
A1163]
Length = 764
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 296 PEAGFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMN 355
PE+ + S + + +VD ++G+ + + ++ K + ID E ++
Sbjct: 205 PESTYTVSPPVEYQPFESTAATFVDTLEGVKEMLSELKSAKEIAIDLE---HHDVHSYHG 261
Query: 356 KVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY 415
VS+MQI++ + ++ D +K + +L+ + PGILK+ + DI L
Sbjct: 262 LVSLMQISTRDKDWVVDTLKPWREELQILN----EVFADPGILKVLHGSSMDIIWLQRDL 317
Query: 416 G--ELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLE 473
G + F Y PK L L K + +K + ++W RPL +
Sbjct: 318 GLYVVGMFDTYHAAC----ALNYPKRSLKFLLHKFVNFEADKRYQMADWRIRPLPSGMFD 373
Query: 474 YAALDAVVLLQIFHHVRS 491
YA D LL I+ H+R+
Sbjct: 374 YARSDTHYLLYIYDHLRN 391
>gi|212528170|ref|XP_002144242.1| exosome component 3'-5' exonuclease [Talaromyces marneffei ATCC
18224]
gi|210073640|gb|EEA27727.1| exosome complex exonuclease Rrp6, putative [Talaromyces marneffei
ATCC 18224]
Length = 795
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 87/199 (43%), Gaps = 15/199 (7%)
Query: 296 PEAGFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMN 355
PE+ +V + + + + +WVD +G+ + + ++ + +D E ++
Sbjct: 208 PESAYVAAPPVDFGPVESTEAVWVDTPEGVAEMVKELKKANEIAVDLE---HHDMHTYYG 264
Query: 356 KVSIMQIASDEMVFIFDLIK-LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHS 414
VS+MQI++ + ++ D ++ ED+ L + P ILK+ + DI L
Sbjct: 265 LVSLMQISTRDKDWVVDTLQPWREDL-----QQLNEVFADPNILKVFHGSTMDIVWLQRD 319
Query: 415 YG--ELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQL 472
G + F Y + PK L L EK +K + ++W RPL++ L
Sbjct: 320 LGLYVVGLFDTYHAAV----ALGFPKRSLKFLLEKYARYEADKKYQMADWRLRPLTEEML 375
Query: 473 EYAALDAVVLLQIFHHVRS 491
YA D LL I+ +R+
Sbjct: 376 RYARADTHYLLYIYDCLRN 394
>gi|70999828|ref|XP_754631.1| exosome complex exonuclease Rrp6 [Aspergillus fumigatus Af293]
gi|66852268|gb|EAL92593.1| exosome complex exonuclease Rrp6, putative [Aspergillus fumigatus
Af293]
Length = 764
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 296 PEAGFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMN 355
PE+ + S + + +VD ++G+ + + ++ K + ID E ++
Sbjct: 205 PESTYTVSPPVEYQPFESTAATFVDTLEGVKEMLSELKSAKEIAIDLE---HHDVHSYHG 261
Query: 356 KVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY 415
VS+MQI++ + ++ D +K + +L+ + PGILK+ + DI L
Sbjct: 262 LVSLMQISTRDKDWVVDTLKPWREELQILN----EVFADPGILKVLHGSSMDIIWLQRDL 317
Query: 416 G--ELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLE 473
G + F Y PK L L K + +K + ++W RPL +
Sbjct: 318 GLYVVGMFDTYHAAC----ALNYPKRSLKFLLHKFVNFEADKRYQMADWRIRPLPSGMFD 373
Query: 474 YAALDAVVLLQIFHHVRS 491
YA D LL I+ H+R+
Sbjct: 374 YARSDTHYLLYIYDHLRN 391
>gi|428215240|ref|YP_007088384.1| DNA segregation ATPase FtsK [Oscillatoria acuminata PCC 6304]
gi|428003621|gb|AFY84464.1| DNA segregation ATPase, FtsK/SpoIIIE family [Oscillatoria acuminata
PCC 6304]
Length = 863
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 21/152 (13%)
Query: 356 KVSIMQIASDE------MVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIK 409
++S++Q+ + E +I D+++ E ++ +++I+ +P I K+ +N D++
Sbjct: 38 RLSLIQVLAQETDCTGDFAYILDVLEKRE----LVQEFISKIMANPDIEKVFHNSSYDLR 93
Query: 410 QLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGL------NKTRRNSNWE 463
L S + + L K + G+S L K L A L + ++S+W
Sbjct: 94 FLGKSQSQ-----NVTCTLKWARKLKRDRLGVSNLKLKTLAAELCQFSDIHTEEQSSDWG 148
Query: 464 QRPLSQNQLEYAALDAVVLLQIFHHVRSCSQP 495
QRPLSQ QL YA +D V L Q++ ++ ++P
Sbjct: 149 QRPLSQRQLTYAKMDTVYLAQVYLKLKQFTEP 180
>gi|422651784|ref|ZP_16714576.1| ribonuclease D [Pseudomonas syringae pv. actinidiae str. M302091]
gi|330964859|gb|EGH65119.1| ribonuclease D [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 377
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 12/177 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI + ++ D
Sbjct: 4 DIHWIRDDDSLARHCAQWQSLPFVALDTE----FMRVDTFYPIAALLQIGDGQSAWLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + P L+ +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LLINNWAP------LSALLENPDVIKVVHACSEDLEVLLRLTGSLPV-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
G S L +++L L K S+W QRPLS Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLNIDLPKGETRSDWLQRPLSDTQISYAAEDAVHLAELFAILR 169
>gi|399004514|ref|ZP_10707136.1| ribonuclease D [Pseudomonas sp. GM18]
gi|398119286|gb|EJM08988.1| ribonuclease D [Pseudomonas sp. GM18]
Length = 377
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI ++ D
Sbjct: 4 DIHWIRDNDSLGQFCTEWQQLPFVALDTE----FMRVDTFYPIAGLLQIGDGVRAYLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + P L +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LTIDNWQP------LAALLENPAVVKVVHACSEDLEVLLRLTGSLPA-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L + +LG L K S+W QRPLS Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQDVLGIDLPKGETRSDWLQRPLSDTQISYAAEDAVHLAEVFVQLRP 170
>gi|300864534|ref|ZP_07109398.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300337492|emb|CBN54546.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 880
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 90/184 (48%), Gaps = 34/184 (18%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCE---WK-PNYVKGCKMNKVSIMQIASD------ 365
+ ++ + + + AI +++ D E W+ PN ++S++QI +D
Sbjct: 1 MFYLTKANDIQAAITKFATAEIIWADTEVADWQTPN-------PRLSLIQILADPNDLTG 53
Query: 366 EMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGE-LECFKHY 424
+ +I D++ D P+++++ + I+ +P I K+ +N D++ L + + + C
Sbjct: 54 DFAYILDVL----DKPELVENFIDLIMANPTIEKVFHNSSYDLRYLGKTQAKNVTCTWKI 109
Query: 425 EMLLDIQNVFKEPKGGLSGLAEKILGAGL------NKTRRNSNWEQRPLSQNQLEYAALD 478
L ++ + + P L K L AGL NK + S+W +RPL+Q QL+YA +D
Sbjct: 110 AQKLSLERL-QVPNRQL-----KTLAAGLCKFTEINKQEQTSDWGRRPLTQKQLDYAKMD 163
Query: 479 AVVL 482
V L
Sbjct: 164 TVYL 167
>gi|422676385|ref|ZP_16735715.1| ribonuclease D [Pseudomonas syringae pv. aceris str. M302273]
gi|330974089|gb|EGH74155.1| ribonuclease D [Pseudomonas syringae pv. aceris str. M302273]
Length = 377
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI + ++ D
Sbjct: 4 DIHWIRDDDSLARHCAQWQSLPFVALDTE----FMRVDTFYPIAALLQIGDGQSAWLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + + P L+ +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LLINDWRP------LSALLENPDVIKVVHACSEDLEVLLRLTGSLPV-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++L L K S+W QRPLS+ Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLDIDLPKGETRSDWLQRPLSETQVSYAAEDAVHLAELFTILRP 170
>gi|66044808|ref|YP_234649.1| ribonuclease D [Pseudomonas syringae pv. syringae B728a]
gi|63255515|gb|AAY36611.1| Ribonuclease D [Pseudomonas syringae pv. syringae B728a]
Length = 377
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI + ++ D
Sbjct: 4 DIHWIRDDDSLARHCAQWQSLPFVALDTE----FMRVDTFYPIAALLQIGDGQSAWLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + + P L+ +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LLINDWRP------LSALLENPDVIKVVHACSEDLEVLLRLTGSLPV-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++L L K S+W QRPLS+ Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLDIDLPKGETRSDWLQRPLSETQVSYAAEDAVHLAELFTILRP 170
>gi|262380470|ref|ZP_06073624.1| 3'-5' exonuclease [Acinetobacter radioresistens SH164]
gi|262297916|gb|EEY85831.1| 3'-5' exonuclease [Acinetobacter radioresistens SH164]
Length = 218
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 25/166 (15%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
VVG D E KP + +G ++Q+A+ E VF+F L PD+L+ L IL +
Sbjct: 51 VVGFDSESKPTFRRGEISTGPHLIQLATAEKVFLFQL------NPDILN-FLKPILANQK 103
Query: 397 ILKLGYNFQCDIKQLAHSYGELE-------CFKHYEMLLDIQNVFKEPKGGLSGLAEKIL 449
+K+G+ + D+ EL+ CF + FK+P GL +
Sbjct: 104 QVKVGFGLKNDVHLFQKKGIELQSTVELSKCFSAFG--------FKQPV-GLKNAVALLF 154
Query: 450 GAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCS 493
K+++ S+W LS Q+ YAA D L +F +R S
Sbjct: 155 QQNFPKSKKISMSDWSNMRLSSAQIGYAAADVYAALLVFQELRKRS 200
>gi|114775667|ref|ZP_01451235.1| ribonuclease D [Mariprofundus ferrooxydans PV-1]
gi|114553778|gb|EAU56159.1| ribonuclease D [Mariprofundus ferrooxydans PV-1]
Length = 398
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 88/175 (50%), Gaps = 10/175 (5%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
I +++ D L +A + C+V+ +D E+ + + + +++QI + ++ D I
Sbjct: 6 IEFINTPDQLRQAAATMAECQVLCVDTEF---HRESTFYPEFALLQIYGNGQCWVIDPIT 62
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK 435
+ +D+ V D I+ +P ILK+ + + DI+ + + G L ++ + +
Sbjct: 63 I-KDLAPVWD-----IMLNPAILKVFHAARQDIEIIFNEAGGLP-LPLFDTQVAAALLGY 115
Query: 436 EPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
+ G L ++I L K ++W+ RPL++ Q+ YAA D + L+ +F H++
Sbjct: 116 GQQVGFGNLVQRITKKLLPKGESFTDWKARPLTKKQMAYAADDVIWLMPVFQHLK 170
>gi|188996542|ref|YP_001930793.1| DNA-directed DNA polymerase [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931609|gb|ACD66239.1| DNA-directed DNA polymerase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 587
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 86/167 (51%), Gaps = 12/167 (7%)
Query: 355 NKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHS 414
+K+ ++QI +E F+ DL+K+ P+V+ + + ++++ GI+ G+N + D+K L +
Sbjct: 44 DKIRLIQIGDEENTFVIDLLKIN---PEVVKNHIQNLIENKGII--GHNLKFDLKFLKTN 98
Query: 415 YGELECFKHYEMLLDIQNVFK---EPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQ 471
L ++ ++ Q + K + LS A++ + ++KT + S W + LS Q
Sbjct: 99 LNILPKIV-FDTMIASQILAKGDSNQRHSLSASAKRFVSLDVDKTYQKSPWWAKDLSSEQ 157
Query: 472 LEYAALDAVVLLQIFHHVRSCSQPTDVSEGHDKIEWKSYIVSHMDNP 518
+EYAA D L +F ++ ++ H K +++ V + NP
Sbjct: 158 IEYAAKDIDTLRHLFKEEKNQLNQDNL---HKKASGETFKVFGVINP 201
>gi|254416561|ref|ZP_05030312.1| 3'-5' exonuclease domain protein [Coleofasciculus chthonoplastes
PCC 7420]
gi|196176527|gb|EDX71540.1| 3'-5' exonuclease domain protein [Coleofasciculus chthonoplastes
PCC 7420]
Length = 303
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 87/202 (43%), Gaps = 31/202 (15%)
Query: 330 CHIEGCKVVGIDCEWKPNYVKGCKMN--KVSIMQIASD------EMVFIFDLIKLAEDVP 381
C I C I W V K + ++S++Q+ +D E V I D++ P
Sbjct: 12 CAIASCTQASI--LWLDTEVADYKTDTPQLSLIQVLADGNDLTAESVGILDVLY----QP 65
Query: 382 DVLDSCLTRILQSPGILKLGYNFQCDIKQLA-HSYGELEC-------FKHYEMLLDIQNV 433
++ D + +++ +P I K+ +N D K L H + C +Y + +
Sbjct: 66 ELADEFIAKVMYNPAIEKVFHNASYDRKFLGKHKAKNVTCTLELAKTIPYYRLPV----- 120
Query: 434 FKEPKGGLSGLAEKI-LGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSC 492
P L L E + ++KT + +W +RPLS QL+YAA D V + + H+
Sbjct: 121 ---PNYQLKTLTEYFGICPQVDKTEQTGDWRKRPLSPRQLDYAAKDVVYVAHLHRHLLDL 177
Query: 493 SQPTDVSEGHDKIEWKSYIVSH 514
+QP +E + + + + H
Sbjct: 178 AQPDPATEDIEALTLRYRQIEH 199
>gi|381204919|ref|ZP_09911990.1| putative 3'-5' exonuclease [SAR324 cluster bacterium JCVI-SC
AAA005]
Length = 222
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 14/159 (8%)
Query: 336 KVVGIDCEWKPNYVKGCKMNK--VSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQ 393
K++ +D E + G K+N+ + ++Q+ D + L P+ L R+LQ
Sbjct: 25 KLIAVDTE-----LHGLKINRDNICLVQLGDDARN-----VTLIRPNPERPPKNLKRLLQ 74
Query: 394 SPGILKLGYNFQCDIKQLAHSYGEL-ECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAG 452
+ KL + D+ S G + E F+ +++ I + + G L L E++L
Sbjct: 75 DSSVRKLFHFALTDVAFFEVSMGIIVENFRCTKVMSKIVRTYTDSHG-LKNLCEELLSIE 133
Query: 453 LNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
++K ++ +NW L+Q+QLEYAA D L+ I+H + S
Sbjct: 134 ISKQQQQTNWASPNLTQSQLEYAASDVYHLIDIYHQLES 172
>gi|323456411|gb|EGB12278.1| hypothetical protein AURANDRAFT_61313 [Aureococcus anophagefferens]
Length = 701
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 16/153 (10%)
Query: 333 EGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRIL 392
G VVG+D EW+P +++Q+A+ V++ DL+ L + V+ + L +L
Sbjct: 349 RGDDVVGVDAEWEPE-----TDGPAAVLQVATRAAVYVVDLVALDGEALTVVGAALDAVL 403
Query: 393 QSPGILKLGYNFQCDIKQLAHSYGELECFKHYEM--LLDIQNVFKEPKGGLSGLAEKILG 450
+ + +G+ D+++ A ++ L ++ L D LSGLA +LG
Sbjct: 404 EK--AVVVGFAVGNDLERAAAAHPALAGLRNATTRELRDYAGSSS-----LSGLAGALLG 456
Query: 451 AGLNKTRRNSNW--EQRPLSQNQLEYAALDAVV 481
L+K + S W RPL + YAALDA V
Sbjct: 457 VRLDKRLQCSAWGVGARPLPDAWVAYAALDAYV 489
>gi|99079868|ref|YP_612022.1| 3'-5' exonuclease [Ruegeria sp. TM1040]
gi|99036148|gb|ABF62760.1| 3'-5' exonuclease [Ruegeria sp. TM1040]
Length = 204
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 27/173 (15%)
Query: 337 VVGIDCE---WKPNYVKGCKMNKVSIMQIAS-DEMVFIFDLIKLAEDVPDVLDSCLTRIL 392
VV IDCE P+ + C ++Q++S D + + K D P+ LT +L
Sbjct: 19 VVAIDCETMGLNPHRDRLC------VVQMSSGDGDAHLVQIAKGQTDAPN-----LTAML 67
Query: 393 QSPGILKLGYNFQCDIKQLAHSYGELE----CFKHYEMLLDIQNVFKEPKGGLSGLAEKI 448
+P +LKL + + DI L H +G L C K L+ + + + GL L + +
Sbjct: 68 TNPDVLKLFHYGRFDIAALYHRFGALAAPVYCTKIASRLV---RTYTD-RHGLKNLTQDL 123
Query: 449 LGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSEG 501
LG ++K ++ S+W L++ Q++YAA D + L H +R V EG
Sbjct: 124 LGQDISKQQQMSDWGAETLTRAQMDYAASDVLHL----HRLRDALDQRLVREG 172
>gi|381152499|ref|ZP_09864368.1| ribonuclease D [Methylomicrobium album BG8]
gi|380884471|gb|EIC30348.1| ribonuclease D [Methylomicrobium album BG8]
Length = 387
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 22/206 (10%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEW---KPNYVKGCKMNKVSIMQIASDEMVFIFD 372
I ++D L + I + ID E+ K Y K C ++QIA+ + V D
Sbjct: 6 IEYIDAPAQLAELCTRIHSTPWIAIDTEFLREKTYYPKFC------LLQIATPDWVACVD 59
Query: 373 LIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQN 432
I L LD L L +PGI+K+ ++ + D++ G+L ++ +
Sbjct: 60 PIALPR-----LDE-LFEALYNPGIVKVLHSSRQDLEIFYQLTGKLPS-PIFDTQVAAPL 112
Query: 433 VFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSC 492
+ + G + L +L LNK ++W +RPL++ +++YAA D + L +I+ +R
Sbjct: 113 LGYQDNPGYAMLVSHLLNVNLNKAHTRADWSKRPLTEEEIQYAADDVIYLCRIYQLMR-- 170
Query: 493 SQPTDVSEGHDKIEWKSYIVSHMDNP 518
D +++W + + NP
Sbjct: 171 ----DKLSALGRLDWLQPDFAELSNP 192
>gi|384249267|gb|EIE22749.1| hypothetical protein COCSUDRAFT_47679 [Coccomyxa subellipsoidea
C-169]
Length = 400
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 31/194 (15%)
Query: 300 FVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSI 359
S ++HL + ++ V++ + +A ++ V +D EW+P K C S+
Sbjct: 8 LTPSDYIHLPDDWA--VLLVNDENTFIQAWEIVDDAYVCALDAEWEPYTSKPC----ASL 61
Query: 360 MQIA------SDEMVFIFDLIKLAEDVPDV-LDSCLTRILQSPGILKLGYNFQCDIKQLA 412
+Q A +++ + + D E VP + L L +I + +LK+GY D++ +A
Sbjct: 62 VQAAVRTRGSAEQYLLLMDF----EAVPKLDLRRLLQKIFRDRAMLKVGYGLLMDLRAIA 117
Query: 413 HSYG--ELECFKHYEMLLDIQNVFKE--PKG----------GLSGLAEKILGAGLNKTRR 458
G C + +DI ++ + KG GL+GL E LG L+K +
Sbjct: 118 TGLGGEGTGCVSVVDPFIDIGSLHRALYSKGTPGIAKVEGKGLAGLVEVQLGQRLDKRLQ 177
Query: 459 NSNWEQRPLSQNQL 472
S+W QRPL +Q+
Sbjct: 178 CSSWSQRPLQPDQI 191
>gi|374623203|ref|ZP_09695717.1| ribonuclease D [Ectothiorhodospira sp. PHS-1]
gi|373942318|gb|EHQ52863.1| ribonuclease D [Ectothiorhodospira sp. PHS-1]
Length = 381
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 23/214 (10%)
Query: 327 KAICH-IEGCKVVGIDCEW---KPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPD 382
+A+C +E C + +D E+ K Y + C ++Q+A+ ++V D + L + P
Sbjct: 14 EALCRDLESCAWLALDTEFIREKTYYPQLC------LIQVATPDLVACIDPLALEDLAP- 66
Query: 383 VLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLS 442
L R+L+ P +LK+ + D++ H G + ++ + + + G
Sbjct: 67 -----LDRLLRRPDLLKVLHAAGQDLEIFYHRDGTVPA-PIFDTQVAASLLGHGDQIGYG 120
Query: 443 GLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSEGH 502
L + +LG L K ++W +RPL QL YAA D L Q + +R D E
Sbjct: 121 KLIQAVLGVELEKGHSRTDWARRPLDPEQLTYAADDVRYLAQAYPLIR------DALERS 174
Query: 503 DKIEWKSYIVSHMDNPKKSKKRPTIKKETESGAN 536
++ W + +P + P G N
Sbjct: 175 GRLTWLEEDFRRLADPTGYEPAPDAMWRRLKGIN 208
>gi|221503925|gb|EEE29602.1| 3'-5' exonuclease domain-containing protein, putative [Toxoplasma
gondii VEG]
Length = 1048
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 77/189 (40%), Gaps = 42/189 (22%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
VV +D EW + S++ +A++ VF+ DL+ L L + +P
Sbjct: 811 VVALDLEWTLPHA-------ASVLSLATESRVFLVDLVNDNPVYKATLLQMLRWLFANPF 863
Query: 397 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQ------NVFKEPKGG---------- 440
I KL Y DI +L + G + +D++ N +E + G
Sbjct: 864 IAKLMYQASGDITKLFFALGAVGSPGALVHCIDLRKGRHLANAERELREGVIAKEHFLEK 923
Query: 441 -------------------LSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVV 481
L + ++L A L+K+ + SNW RPL+ +Q YAALDA V
Sbjct: 924 NEEETPERYMRPVKRRFPSLQEMCRQVLHADLDKSEQRSNWNMRPLTASQAHYAALDAYV 983
Query: 482 LLQIFHHVR 490
L+ + +R
Sbjct: 984 LILLEAALR 992
>gi|437596497|ref|ZP_20796309.1| ribonuclease D, partial [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|435249656|gb|ELO29431.1| ribonuclease D, partial [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
Length = 194
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 80/171 (46%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 3 ETDDALASLCEAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 58
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 59 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 107
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G++ + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 108 RPLSWGVAAMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 158
>gi|384920805|ref|ZP_10020805.1| exonuclease, putative [Citreicella sp. 357]
gi|384465335|gb|EIE49880.1| exonuclease, putative [Citreicella sp. 357]
Length = 204
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 80/151 (52%), Gaps = 17/151 (11%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VV IDCE + + +++ ++Q+ A D + + + D P+ L+R+L P
Sbjct: 19 VVAIDCETMGLHPQ---RDRLCVVQLSAGDGHAHLVQIERGQTDAPN-----LSRLLADP 70
Query: 396 GILKLGYNFQCDIKQLAHSYGELE----CFKHYEMLLDIQNVFKEPKGGLSGLAEKILGA 451
+LKL + + DI + H++G L C K L+ + + + GL L++++LG
Sbjct: 71 DVLKLFHYGRFDIAAMYHAFGTLAQPVWCTKIASRLV---RTYTD-RHGLRNLSQELLGI 126
Query: 452 GLNKTRRNSNWEQRPLSQNQLEYAALDAVVL 482
++K +++S+W L++ Q++YAA D + L
Sbjct: 127 DMSKQQQSSDWGAPDLTRAQIDYAASDVLHL 157
>gi|297741701|emb|CBI32833.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 14/172 (8%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
W+ +++ +H+ H +VG+D EW+PN + N V+I+Q+ IF L+ A
Sbjct: 38 WIGDIEHIHRHRLHK---LIVGLDIEWRPNNAR--YTNPVAILQLCVGRRCLIFQLL-YA 91
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLA--HSYGELECFKHYEMLLDIQNVFK 435
++P + L L +G Q D ++L H+ + + N +
Sbjct: 92 PEIP----TSLIDFLGDTDYTFVGVGIQADSQKLLNDHNLRVGNVVDLAVLAARVLNTRE 147
Query: 436 EPKGGLSGLAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQI 485
G+ LA ++LG + K + S W+ LS Q+ YA +DA V ++
Sbjct: 148 LRNAGIKRLAREVLGREVEKPKHVARSRWDTDWLSDAQVHYACVDAFVSFEV 199
>gi|145354761|ref|XP_001421645.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581883|gb|ABO99938.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 389
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 73/156 (46%), Gaps = 8/156 (5%)
Query: 336 KVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQS 394
+ +G D E KPN+ K +N +++Q+A++ + L + + P L + + +
Sbjct: 67 RFIGFDVETKPNFTKNVANVNAPALVQLANERGCVLVHLASMRGETPPTLRA----LCED 122
Query: 395 PGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKI-LGAGL 453
G + +G D++ + ++G + Y + I F + GL ++ + A
Sbjct: 123 AGSIFVGNGVWSDMRDVDWAFGTKS--RGYVDVGVIAQTFGHSRHGLKAMSARYGYDAEK 180
Query: 454 NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
K+ + SNWE+ PL Q++Y A DA + L + +
Sbjct: 181 PKSVQTSNWEKSPLEAKQIDYGAKDAALGLWVLKQL 216
>gi|237844623|ref|XP_002371609.1| 3'-5' exonuclease domain-containing protein [Toxoplasma gondii
ME49]
gi|211969273|gb|EEB04469.1| 3'-5' exonuclease domain-containing protein [Toxoplasma gondii
ME49]
Length = 1045
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 77/189 (40%), Gaps = 42/189 (22%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
VV +D EW + S++ +A++ VF+ DL+ L L + +P
Sbjct: 808 VVALDLEWTLPHA-------ASVLSLATESRVFLVDLVNDNPVYKATLLQMLRWLFANPF 860
Query: 397 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQ------NVFKEPKGG---------- 440
I KL Y DI +L + G + +D++ N +E + G
Sbjct: 861 IAKLMYQASGDITKLFFALGAVGSPGALVHCIDLRKGRHLANAERELREGVIAKEHFLEK 920
Query: 441 -------------------LSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVV 481
L + ++L A L+K+ + SNW RPL+ +Q YAALDA V
Sbjct: 921 NEEETPERYMRPVKRRFPSLQEMCRQVLHADLDKSEQRSNWNMRPLTASQAHYAALDAYV 980
Query: 482 LLQIFHHVR 490
L+ + +R
Sbjct: 981 LILLEAALR 989
>gi|345306474|ref|XP_001508312.2| PREDICTED: Werner syndrome ATP-dependent helicase-like
[Ornithorhynchus anatinus]
Length = 1751
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 81/158 (51%), Gaps = 13/158 (8%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
V+G D EW P Y KG K+ +V+++Q+ SD+ ++F + ++ L +L++
Sbjct: 329 VIGFDIEWPPTYSKG-KLGRVALIQLCVSDQKCYLFHISSMSG-----FPKGLKMLLENE 382
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQN--VFKEPKGGLSGLAEKILGAGL 453
I K G + D +L + E++ K + L D+ N + + K L+ L + + L
Sbjct: 383 AIRKAGVGIEGDQWKLLSDF-EIK-LKSFVELADVANEKLKCKEKWSLNSLVKHLFNKQL 440
Query: 454 --NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
+K R S+W++ PL+++Q YAA DA I+ +
Sbjct: 441 LKDKAIRCSSWDEFPLTEDQKLYAATDAYAGFIIYQKL 478
>gi|398854783|ref|ZP_10611319.1| ribonuclease D [Pseudomonas sp. GM80]
gi|398234335|gb|EJN20213.1| ribonuclease D [Pseudomonas sp. GM80]
Length = 377
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + + L + + V +D E +++ ++ ++Q+ + ++ D
Sbjct: 4 DIHWIRDNESLAQFCAEWQQLPFVALDTE----FMRVDTFYPIAGLLQVGDGKRAYLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + P L +L++P +LK+ + D++ L G L ++ L +
Sbjct: 60 LTINAWQP------LAALLENPAVLKVLHACSEDLEVLLRLTGSLPA-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L + +LG L K S+W QRPLS Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQAVLGIELPKGETRSDWLQRPLSDTQISYAAEDAVHLAEVFVQLRP 170
>gi|327314590|ref|YP_004330027.1| 3'-5' exonuclease [Prevotella denticola F0289]
gi|326944244|gb|AEA20129.1| 3'-5' exonuclease [Prevotella denticola F0289]
Length = 224
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 17/175 (9%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
KA+ ++ ++GID E +P + KG + +KV+++Q E+ F+F L + +PD
Sbjct: 37 KAVNYLLSRDIIGIDTETRPVFRKG-QHHKVALLQACDREVCFLFRLNIIG--IPD---- 89
Query: 387 CLTRILQSPGILKLGYNFQCDIKQL----AHSYGELECFKHYEMLLDIQNVFKEPKGGLS 442
C+ R L+ + K+G + D+ L A G + Y L I+++ L
Sbjct: 90 CVKRFLEDTTVPKVGLSLGDDMLMLHQRSAFKPGYFIDLQDYVKSLGIEDM------SLQ 143
Query: 443 GLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
L + + K + SNWE + L+ Q YA+ DA + ++ + D
Sbjct: 144 KLYANVFHERITKREQLSNWENQILNDKQKLYASTDAWTCINLYERLHELKHTGD 198
>gi|444911412|ref|ZP_21231587.1| Ribonuclease D [Cystobacter fuscus DSM 2262]
gi|444718170|gb|ELW58986.1| Ribonuclease D [Cystobacter fuscus DSM 2262]
Length = 388
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 14/148 (9%)
Query: 356 KVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY 415
++ +Q+A+D VF+FD ++ P V S L R+++ P K + D+ LA
Sbjct: 45 RLCFLQLATDTDVFLFDTLQ-----PGVHPSLLARVMEDPERTKFFHAASGDLPFLA--- 96
Query: 416 GELECFKHYEMLLDIQ---NVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQL 472
E L D + PK GL+ LA + LG L K + S++ RPL
Sbjct: 97 ---EAGVRVRGLFDTHRAATLLGWPKVGLADLARERLGVELPKEHQQSDFALRPLPPGMR 153
Query: 473 EYAALDAVVLLQIFHHVRSCSQPTDVSE 500
+Y A D L+++ VR + DV E
Sbjct: 154 DYIANDVRYLVELGRQVREECRKADVLE 181
>gi|431927181|ref|YP_007240215.1| ribonuclease D [Pseudomonas stutzeri RCH2]
gi|431825468|gb|AGA86585.1| ribonuclease D [Pseudomonas stutzeri RCH2]
Length = 384
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 17/165 (10%)
Query: 328 AICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSC 387
A+ I +G D E KP + G + ++Q A+ E ++ + +P ++
Sbjct: 41 AVAEILQASCIGFDTESKPTFKVGEVSSGPHLIQFATAERAYLLRV-----GMPGCTEAA 95
Query: 388 LTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF----KEPKGGLSG 443
+LQ+PGI+K+G+ + D HS + LLD+ +V K+ + GL G
Sbjct: 96 RA-VLQAPGIVKIGFGLKSD-----HSRLRSKLNIQPVSLLDLGSVLRYQGKKGQVGLRG 149
Query: 444 LAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIF 486
ILG + K+RR SNW L++ Q YAA DA L++F
Sbjct: 150 AVAGILGTRIEKSRRVATSNWANARLTEAQQAYAANDAYAALRVF 194
>gi|398875377|ref|ZP_10630554.1| ribonuclease D [Pseudomonas sp. GM67]
gi|398886982|ref|ZP_10641816.1| ribonuclease D [Pseudomonas sp. GM60]
gi|398186628|gb|EJM73998.1| ribonuclease D [Pseudomonas sp. GM60]
gi|398208032|gb|EJM94773.1| ribonuclease D [Pseudomonas sp. GM67]
Length = 377
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI ++ D
Sbjct: 4 DIHWIRDNDSLGRFCAEWQQLPYVALDTE----FMRVDTFYPIAGLLQIGDGVRAYLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + P L +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LTIDNWQP------LAALLENPAVVKVVHACSEDLEVLLRLTGSLPA-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++LG L K S+W QRPLS Q+ YAA DA+ L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLGIDLPKGETRSDWLQRPLSDTQISYAAEDALHLAEVFVQLRP 170
>gi|422404486|ref|ZP_16481538.1| ribonuclease D, partial [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330877463|gb|EGH11612.1| ribonuclease D [Pseudomonas syringae pv. glycinea str. race 4]
Length = 307
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI + ++ D
Sbjct: 4 DIHWIRDDDSLARHCAEWQLLPFVALDTE----FMRVDTFYPIAALLQIGDGQSAWLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + + P L+ +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LLINDWQP------LSALLENPDVIKVVHACSEDLEVLLRLTGSLPV-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++L L K S+W QRPLS+ Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLNIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAELFSILRP 170
>gi|254282849|ref|ZP_04957817.1| ribonuclease D [gamma proteobacterium NOR51-B]
gi|219679052|gb|EED35401.1| ribonuclease D [gamma proteobacterium NOR51-B]
Length = 372
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 32/183 (17%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
WVD GL + + + V ID E++ + +V+++QIA+ + V++ D + L
Sbjct: 5 WVDSDRGLAEVVAQVIDGDFVAIDTEFR---RRDTFWPEVALVQIATADQVWLIDPLPLT 61
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGE-LECFKHYEMLLDIQNVFKE 436
+ P L +LQ + + ++ HS GE LE F+ + +L +F
Sbjct: 62 DTGP------LAELLQ-----------KSTLTKVLHSAGEDLEVFQAWLGVLP-SPLFDT 103
Query: 437 PKG--------GLS--GLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
K GLS L E + L+K NS+W RPL+ Q YAA D L+ ++
Sbjct: 104 QKAAALLGYGFGLSYAKLVEAVCQVSLDKDETNSDWLVRPLTSAQCRYAAQDVTYLVDVY 163
Query: 487 HHV 489
+
Sbjct: 164 SRL 166
>gi|170596587|ref|XP_001902821.1| 3'-5' exonuclease family protein [Brugia malayi]
gi|158589271|gb|EDP28335.1| 3'-5' exonuclease family protein [Brugia malayi]
Length = 704
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%)
Query: 440 GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVS 499
GLS L E++LG L+KT + S W++RPL QL YAALDA +L ++ + D+S
Sbjct: 623 GLSALCERVLGKPLDKTEQCSVWDRRPLRDLQLRYAALDAYCMLMLYEKCVDWASRLDLS 682
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 338 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGI 397
VG+D EW +YV +K +I+Q+A +FI D+ ++ D+ L + ++ +
Sbjct: 439 VGVDAEWS-SYVS---YSKATILQLAIPCHIFIIDVDEIKADI---LVNFFEKLFVEWKL 491
Query: 398 LKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK 435
LK+GY F D+ QL + H + L+ I + K
Sbjct: 492 LKIGYQFDEDLIQLRSAVQHCSALYHPKNLICIGKIVK 529
>gi|147777289|emb|CAN60287.1| hypothetical protein VITISV_011782 [Vitis vinifera]
Length = 208
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 14/172 (8%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
W+ +++ +H+ H +VG+D EW+PN + N V+I+Q+ IF L+ A
Sbjct: 38 WIGDIEHIHRHRLHK---LIVGLDIEWRPNNAR--YTNPVAILQLCVGRRCLIFQLL-YA 91
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLA--HSYGELECFKHYEMLLDIQNVFK 435
++P + L L +G Q D ++L H+ + + N +
Sbjct: 92 PEIP----TSLIDFLGDTDYTFVGVGIQADSQKLLNDHNLRVGNVVDLAVLAARVLNTRE 147
Query: 436 EPKGGLSGLAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQI 485
G+ LA ++LG + K + S W+ LS Q+ YA +DA V ++
Sbjct: 148 LRNAGIKRLAREVLGREVEKPKHVARSRWDTDWLSDAQVHYACVDAFVSFEV 199
>gi|437248783|ref|ZP_20715074.1| ribonuclease D, partial [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
gi|435167609|gb|ELN53516.1| ribonuclease D, partial [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
Length = 330
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 80/171 (46%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 3 ETDDALASLCEAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 58
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 59 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 107
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G++ + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 108 RPLSWGVAAMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 158
>gi|431805515|ref|YP_007232416.1| ribonuclease D [Liberibacter crescens BT-1]
gi|430799490|gb|AGA64161.1| Ribonuclease D [Liberibacter crescens BT-1]
Length = 383
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 12/161 (7%)
Query: 359 IMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGEL 418
++QIA+ +M I D + ++ S ++ +P I+K+ + + DI+ + H ++
Sbjct: 41 LIQIATPKMGIIIDPLD-----SEINLSAFFNLMLNPSIVKVFHAARQDIEIIFHMSRQI 95
Query: 419 ECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALD 478
+ + F+E L K+LG ++K+ R +NW QRPLS QL+YA D
Sbjct: 96 PTPIFDTQVAAMVCGFRE-SISYDTLVRKLLGQQIDKSSRFTNWHQRPLSSKQLDYALAD 154
Query: 479 AVVLLQIFHHVRSCSQPTDVSEGHDKIEWKSYIVSHMDNPK 519
L +I+ +++ + T S EW +S ++NP+
Sbjct: 155 VTYLCEIYTILKAELEQTKRS------EWLKEEMSILENPQ 189
>gi|325856853|ref|ZP_08172351.1| 3'-5' exonuclease [Prevotella denticola CRIS 18C-A]
gi|325483226|gb|EGC86203.1| 3'-5' exonuclease [Prevotella denticola CRIS 18C-A]
Length = 224
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 17/175 (9%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
KA+ ++ ++GID E +P + KG + +KV+++Q E+ F+F L + +PD
Sbjct: 37 KAVNYLLSRDIIGIDTETRPVFRKG-QHHKVALLQACDREVCFLFRLNIIG--IPD---- 89
Query: 387 CLTRILQSPGILKLGYNFQCDIKQL----AHSYGELECFKHYEMLLDIQNVFKEPKGGLS 442
C+ R L+ + K+G + D+ L A G + Y L I+++ L
Sbjct: 90 CVKRFLEDTTVPKVGLSLGDDMLMLHQRSAFKPGYFIDLQDYVKSLGIEDM------SLQ 143
Query: 443 GLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
L + + K + SNWE + L+ Q YA+ DA + ++ + D
Sbjct: 144 KLYANVFHERITKREQLSNWENQILNDKQKLYASTDAWTCINLYERLHELKHTGD 198
>gi|342878458|gb|EGU79795.1| hypothetical protein FOXB_09654 [Fusarium oxysporum Fo5176]
Length = 557
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 32/173 (18%)
Query: 336 KVVGIDCEWKPNYVKGCKMN-----KVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTR 390
KV+G D EW +V N VS++QIAS V +F + +D D + R
Sbjct: 184 KVIGFDLEW---FVARGPANSNPRRNVSLIQIASPSRVGLFHVALFPKD--DFVAPTFKR 238
Query: 391 ILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKI-- 448
I++ + K+G + D +L ++ G + + +L++ +++K K +G ++I
Sbjct: 239 IMEDESVTKVGVAIKGDCTRLKNNLG-----INSKGILELSHLYKLVKYSKAGELDRINK 293
Query: 449 ------------LGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
LG L K R+SNW R LS +Q+ Y+A DA V LQ+++
Sbjct: 294 VMVSLAVQTQEMLGLPLFKGDDVRSSNWMMR-LSADQIAYSASDAYVGLQLYY 345
>gi|403371484|gb|EJY85623.1| 3'-5' exonuclease family protein [Oxytricha trifallax]
Length = 1077
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 83/183 (45%), Gaps = 24/183 (13%)
Query: 318 WVDEVDGLHKAICHIE----GCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDL 373
W+D L +I I+ C ++ +D E+ C V ++QI++ ++ D+
Sbjct: 833 WIDSQQQLEASIKEIKEELSHCNLLSVDIEYHNLAKHTCI---VCLIQISTYSKDYVIDV 889
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECF--KHYEMLLDIQ 431
+K E V + I P I+K+ + DI+ LA +L+ F ++ Q
Sbjct: 890 LKTKEFVAQYI----QEIFVDPSIVKIFHGCDSDIQILA---SDLDIFVVNLFDTARAYQ 942
Query: 432 NVFKEPKGG--------LSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLL 483
+FK P+ L L +K LG L+K + S+W RPL Q ++YA D+ L+
Sbjct: 943 AIFKLPENAPKHVDLTSLESLCDKFLGIQLDKFFQVSDWRIRPLPQGMMDYARSDSHFLI 1002
Query: 484 QIF 486
++
Sbjct: 1003 PLY 1005
>gi|398941935|ref|ZP_10670028.1| ribonuclease D [Pseudomonas sp. GM41(2012)]
gi|398161300|gb|EJM49536.1| ribonuclease D [Pseudomonas sp. GM41(2012)]
Length = 377
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI ++ D
Sbjct: 4 DIHWIRDNDSLGQFCAEWQQLPFVALDTE----FMRVDTFYPIAGLLQIGDGVRAYLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + P L +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LSIDNWQP------LAALLENPAVVKVVHACSEDLEVLLRLTGSLPA-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++LG L K S+W QRPLS Q+ YAA DA+ L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLGIDLPKGETRSDWLQRPLSDTQISYAAEDALHLAEVFVQLRP 170
>gi|359787365|ref|ZP_09290421.1| ribonuclease D [Halomonas sp. GFAJ-1]
gi|359295382|gb|EHK59652.1| ribonuclease D [Halomonas sp. GFAJ-1]
Length = 377
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 74/179 (41%), Gaps = 31/179 (17%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
W+D + L A + V+ +D E+ + + +++Q + E ++ D
Sbjct: 11 WIDNAEALDAACAQVAAAPVIALDTEF---FRENTFFPVPALLQFTAGEQAYLVD----- 62
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGE-LECFKHYEMLL-------D 429
L +P Q D +L H+ E LE F+H+ +L
Sbjct: 63 -------------PLTTPCTAAFRQLLQNDAVKLLHACSEDLEVFQHWAGVLPSPLADTQ 109
Query: 430 IQNVF--KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
+ F + P G L E +G L K SNW RPL+ +Q EYAALD + LL+++
Sbjct: 110 VAQAFLGETPGMGYQKLVELWMGETLPKEETRSNWLVRPLTPSQCEYAALDVIYLLKVW 168
>gi|426256366|ref|XP_004021811.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
helicase [Ovis aries]
Length = 1446
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 19/170 (11%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG D EW P Y KG + +V+++Q+ S+ ++F + + V L +L++
Sbjct: 76 VVGFDIEWPPVYKKGT-LGRVALIQLCVSESKCYLFHISSML-----VFPQGLKMLLENE 129
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEP-----KGGLSGLAEKILG 450
I K G + D +L + + ++++ +V E L+GL + + G
Sbjct: 130 AIKKAGVGIEQDQWKLLRDFD-----VKLKSIVELTDVANEKLKCIETWSLNGLVKYLFG 184
Query: 451 AGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDV 498
L K R R SNW + PL+++Q YAA DA I+ + + P +
Sbjct: 185 KQLLKDRSVRCSNWSKFPLTEDQKVYAATDAYAGFIIYQKLANLRDPVQI 234
>gi|357043134|ref|ZP_09104833.1| hypothetical protein HMPREF9138_01305 [Prevotella histicola F0411]
gi|355368730|gb|EHG16143.1| hypothetical protein HMPREF9138_01305 [Prevotella histicola F0411]
Length = 228
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 15/167 (8%)
Query: 326 HKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLD 385
KA+ ++ +VGID E +P + KG + KV+++Q E+ F+F L + +PD
Sbjct: 40 EKAVDYLLSRDIVGIDTETRPVFKKG-QHRKVALLQACDREVCFLFRLNLIG--IPD--- 93
Query: 386 SCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE---PKGGLS 442
C+ R L+ + K+G + D+ L C +D+Q+ K L
Sbjct: 94 -CIKRFLEDTTVPKVGLSLTDDMLMLHQ-----RCDFKPGYFIDLQDYVKSLGIEDMSLQ 147
Query: 443 GLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L + + K + SNWE L+ Q YA+ DA ++++ +
Sbjct: 148 KLYANVFHERITKREQLSNWENEILNDKQKIYASTDAWTCIKLYERL 194
>gi|448747752|ref|ZP_21729407.1| Ribonuclease D [Halomonas titanicae BH1]
gi|445564695|gb|ELY20812.1| Ribonuclease D [Halomonas titanicae BH1]
Length = 383
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 31/179 (17%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
W+D + L A + V+ +D E+ + + +++Q + E ++ D + +
Sbjct: 18 WLDTPEALDAACEQVADASVIALDTEF---FRENTFFPVPALVQFTAGEEAYLIDPVAV- 73
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGE-LECFKHY-----EMLLDIQ 431
P K Q +L H+ E LE F+H+ E L+D Q
Sbjct: 74 -----------------PCTDKFRALLQNSAIKLLHACSEDLEVFQHWAGVLPEPLIDTQ 116
Query: 432 NV----FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
V + P G L E +G L K SNW RPLS Q +YAALD + LL+++
Sbjct: 117 VVQGFLGENPGMGYQKLVEFWVGETLPKEETRSNWLLRPLSPAQCQYAALDVIYLLKVW 175
>gi|303275682|ref|XP_003057135.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461487|gb|EEH58780.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 297
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 25/173 (14%)
Query: 338 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGI 397
VG D EWKPNYV+G N+V+++Q+ + + + L+ A D+L ++ P +
Sbjct: 92 VGFDVEWKPNYVRGEPPNRVALLQLHARGLSVLTRLVGHATLHADIL-----ALMTHPNV 146
Query: 398 LKLGYNFQCDIKQLAHSYGELECFK-----------------HYEMLLDIQNVFKEPKG- 439
+ +G + D+++LA + L D+ G
Sbjct: 147 ILVGVGVKQDVRKLARDFPGGGGGDAAATTTTTKTTKTTTTVRVAELADVARRLGHEGGC 206
Query: 440 GLSGLAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
GL LA + +KT+R +NWE+ LS ++ Y + DA + + + +R
Sbjct: 207 GLKALALANDVSTSHKTKRLTMTNWEKPTLSPPEVRYGSQDASLGVDVAEKLR 259
>gi|389685256|ref|ZP_10176580.1| ribonuclease D [Pseudomonas chlororaphis O6]
gi|388550909|gb|EIM14178.1| ribonuclease D [Pseudomonas chlororaphis O6]
Length = 377
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 83/178 (46%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++Q+ + ++ D
Sbjct: 4 DIHWIRDNDSLGQFCTEWQKLPFVALDTE----FMRVDTFYPIAGLLQVGDGQRAYLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + + P L +L++ ++K+ + D++ L G L ++ L +
Sbjct: 60 LTIDDWQP------LAALLENSAVVKVVHACSEDLEVLLRLTGSLPA-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++LG L K S+W QRPLS+ Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLGIELPKGETRSDWLQRPLSETQVSYAAEDAVHLAEVFTQLRP 170
>gi|428773149|ref|YP_007164937.1| 3'-5' exonuclease [Cyanobacterium stanieri PCC 7202]
gi|428687428|gb|AFZ47288.1| 3'-5' exonuclease [Cyanobacterium stanieri PCC 7202]
Length = 295
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 83/172 (48%), Gaps = 10/172 (5%)
Query: 323 DGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASD---EMVFIFDLIKLAED 379
D + I ++ +++ +D E K +++ + ++ ++ +IFD++ +
Sbjct: 7 DEIQDIILDLKEAEILWVDTEVADYKTKNPRLSLIQVLAYPNNVDGSRTYIFDVL----N 62
Query: 380 VPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDI-QNVFKEPK 438
P++ D + I+ + GI K+ +N Q D++ L + F +E+ I ++
Sbjct: 63 KPEITDFFIEHIMSNKGIRKVFHNAQYDLRFLGKREAK-NIFCTFELAKSIPHHILPVKS 121
Query: 439 GGLSGLAEKILG-AGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L L E ++K + +W RPL+QNQ++YA +D V L Q++ ++
Sbjct: 122 KSLKKLTEYFTDFQDIDKDEQGGDWGIRPLTQNQIKYAQMDCVYLAQVYKYL 173
>gi|452747008|ref|ZP_21946814.1| 3'-5' exonuclease [Pseudomonas stutzeri NF13]
gi|452009121|gb|EME01348.1| 3'-5' exonuclease [Pseudomonas stutzeri NF13]
Length = 211
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 17/189 (8%)
Query: 304 RFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIA 363
R L I+ D A I G +G D E KP + G + ++Q A
Sbjct: 17 RLPRFDGLAPTSIVTPSNADEFRTAAEEIMGFACIGFDTESKPTFKVGEVSSGPHLIQFA 76
Query: 364 SDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKH 423
+ ++F + VP +++ ILQ+P +K+G+ + D +L +G+L
Sbjct: 77 TPAKAYLFRI-----GVPGCVEAA-GAILQAPAPVKIGFGLKSDRSRL---HGKLGI--R 125
Query: 424 YEMLLDIQNVF----KEPKGGLSGLAEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAAL 477
LLD+ +V K+ + GL G +L A + K+R SNW L++ Q YAA
Sbjct: 126 PASLLDLGSVLRYQGKKGQVGLRGAVAAVLDARIEKSRSVATSNWANPVLTEAQQAYAAN 185
Query: 478 DAVVLLQIF 486
DA L++F
Sbjct: 186 DAYAALRVF 194
>gi|395847404|ref|XP_003796366.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
helicase [Otolemur garnettii]
Length = 1432
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 17/162 (10%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG D EW P + KG K +V+++Q+ S+ ++F + ++ V L +L++
Sbjct: 77 VVGFDLEWPPVFRKG-KHGRVALIQLCVSESKCYLFHISAMS-----VFPQGLKMLLENE 130
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPK----GGLSGLAEKILGA 451
+ K G Q D +L + K + L D+ N K+ K L+GL + + G
Sbjct: 131 TVKKAGVGIQGDEWKLLRDFDVK--LKSFVELTDVAN--KKLKCIETWSLNGLVKHLFGK 186
Query: 452 GL--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
L +K+ R S+W PL+++Q YAA DA L I+ + +
Sbjct: 187 QLLKDKSVRCSDWSNYPLTEDQKLYAATDAYAGLIIYRKLET 228
>gi|282879856|ref|ZP_06288583.1| 3'-5' exonuclease [Prevotella timonensis CRIS 5C-B1]
gi|281306250|gb|EFA98283.1| 3'-5' exonuclease [Prevotella timonensis CRIS 5C-B1]
Length = 215
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 82/166 (49%), Gaps = 15/166 (9%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
KA+ + ++G+D E +P + KG + KVS++Q+A+ + F+F L L +
Sbjct: 36 KAVDFLLKQSILGVDTETRPVFRKG-QSYKVSLLQVATHDTCFLFRLNILG------ITP 88
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE---PKGGLSG 443
+ R+L++ +G ++ D+ L H + FK +D+Q++ + L
Sbjct: 89 SIKRLLENTETKMIGLSWHDDLLAL-HKRSD---FKKGN-FIDLQDIVGDLGIKDLSLQK 143
Query: 444 LAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L I ++K +R +NW LS+ Q +YAA DA +Q++ +
Sbjct: 144 LYANIFRQKISKRQRLTNWNNETLSEKQKQYAATDAWACIQLYEEI 189
>gi|398839457|ref|ZP_10596704.1| ribonuclease D [Pseudomonas sp. GM102]
gi|398906633|ref|ZP_10653534.1| ribonuclease D [Pseudomonas sp. GM50]
gi|398112791|gb|EJM02645.1| ribonuclease D [Pseudomonas sp. GM102]
gi|398172749|gb|EJM60605.1| ribonuclease D [Pseudomonas sp. GM50]
Length = 377
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI ++ D
Sbjct: 4 DIHWIRDNDSLGQFCAEWQQLPFVALDTE----FMRVDTFYPIAGLLQIGDGVRAYLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + P L +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LTIDNWQP------LAALLENPAVVKVVHACSEDLEVLLRLTGSLPA-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++LG L K S+W QRPLS Q+ YAA DA+ L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLGIDLPKGETRSDWLQRPLSDTQISYAAEDALHLAEVFVQLRP 170
>gi|421358737|ref|ZP_15809034.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|421362707|ref|ZP_15812959.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|421367907|ref|ZP_15818100.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|421387750|ref|ZP_15837749.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|421391853|ref|ZP_15841819.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|421394943|ref|ZP_15844882.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|421403191|ref|ZP_15853045.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|421425915|ref|ZP_15875549.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|421433424|ref|ZP_15882984.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|421441236|ref|ZP_15890706.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|436811308|ref|ZP_20530188.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|436815681|ref|ZP_20533232.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|436847010|ref|ZP_20539642.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|436851272|ref|ZP_20541871.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|436858037|ref|ZP_20546557.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|436865212|ref|ZP_20551179.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|436875615|ref|ZP_20557522.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|436883262|ref|ZP_20561691.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|436887877|ref|ZP_20564206.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|436896333|ref|ZP_20569089.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|436906312|ref|ZP_20575158.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|436911740|ref|ZP_20577569.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|436920095|ref|ZP_20582834.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|436930402|ref|ZP_20588627.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|436935692|ref|ZP_20591132.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|436942881|ref|ZP_20595827.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|436951625|ref|ZP_20600680.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|436964666|ref|ZP_20606302.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|436971359|ref|ZP_20609752.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|436985428|ref|ZP_20614948.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|436991604|ref|ZP_20617615.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|437012181|ref|ZP_20624694.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|437020848|ref|ZP_20627659.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|437029861|ref|ZP_20631043.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|437042501|ref|ZP_20636092.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|437052335|ref|ZP_20641758.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|437058212|ref|ZP_20645059.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|437069192|ref|ZP_20651147.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|437075903|ref|ZP_20654266.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|437086535|ref|ZP_20660544.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|437095490|ref|ZP_20664594.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|437117567|ref|ZP_20670010.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|437125885|ref|ZP_20674154.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|437134625|ref|ZP_20679049.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|437146992|ref|ZP_20686544.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|437167274|ref|ZP_20698592.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|437265867|ref|ZP_20720682.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|437282096|ref|ZP_20729097.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|437308316|ref|ZP_20735357.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|437402361|ref|ZP_20751804.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|437442342|ref|ZP_20757818.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|437462481|ref|ZP_20762632.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|437478411|ref|ZP_20767424.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|437497819|ref|ZP_20773553.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|437500883|ref|ZP_20774185.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|437529790|ref|ZP_20780449.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|437553217|ref|ZP_20783859.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|437575102|ref|ZP_20789898.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|437601368|ref|ZP_20797612.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|437614193|ref|ZP_20801820.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|437645808|ref|ZP_20808884.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|437655734|ref|ZP_20810522.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|437674696|ref|ZP_20816618.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|437695478|ref|ZP_20822119.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|437711975|ref|ZP_20826967.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|437720308|ref|ZP_20828794.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|395986427|gb|EJH95591.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|395987177|gb|EJH96340.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|395990531|gb|EJH99662.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|396008575|gb|EJI17509.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|396010816|gb|EJI19728.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|396013680|gb|EJI22567.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|396030222|gb|EJI38957.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|396055768|gb|EJI64245.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|396061828|gb|EJI70244.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|396064839|gb|EJI73222.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|434963939|gb|ELL56961.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|434973797|gb|ELL66185.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|434977174|gb|ELL69323.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|434986574|gb|ELL78225.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|434990189|gb|ELL81739.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|434995206|gb|ELL86523.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|434996247|gb|ELL87563.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|435001707|gb|ELL92796.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|435009587|gb|ELM00373.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|435014889|gb|ELM05446.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|435016222|gb|ELM06748.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|435025985|gb|ELM16116.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|435028160|gb|ELM18240.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|435032057|gb|ELM22001.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|435038530|gb|ELM28311.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|435043080|gb|ELM32797.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|435048523|gb|ELM38088.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|435052092|gb|ELM41594.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|435057648|gb|ELM47017.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|435062268|gb|ELM51450.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|435063501|gb|ELM52649.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|435068181|gb|ELM57210.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|435079476|gb|ELM68187.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|435082895|gb|ELM71506.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|435084426|gb|ELM73012.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|435090935|gb|ELM79336.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|435092610|gb|ELM80965.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|435094025|gb|ELM82364.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|435102681|gb|ELM90784.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|435105200|gb|ELM93237.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|435109867|gb|ELM97813.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|435113005|gb|ELN00863.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|435116966|gb|ELN04678.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|435120104|gb|ELN07706.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|435134622|gb|ELN21748.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|435151896|gb|ELN38535.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|435168714|gb|ELN54546.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|435177231|gb|ELN62563.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|435185911|gb|ELN70767.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|435205963|gb|ELN89526.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|435211513|gb|ELN94610.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|435219147|gb|ELO01510.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|435221230|gb|ELO03503.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|435224904|gb|ELO06843.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|435239162|gb|ELO19769.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|435244864|gb|ELO24971.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|435245067|gb|ELO25154.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|435245518|gb|ELO25603.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|435261138|gb|ELO40299.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|435263849|gb|ELO42882.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|435272296|gb|ELO50714.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|435272701|gb|ELO51087.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|435277754|gb|ELO55686.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|435277939|gb|ELO55817.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|435287870|gb|ELO64975.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|435294878|gb|ELO71443.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
Length = 375
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 80/171 (46%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 7 ETDDALASLCEAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 62
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 63 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 111
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G++ + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 112 RPLSWGVAAMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 162
>gi|205357371|ref|ZP_02347252.2| ribonuclease D [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|205322073|gb|EDZ09912.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
Length = 375
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 7 ETDDALASLCEAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 62
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 63 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 111
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 112 RPLSWGFAAMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 162
>gi|421885169|ref|ZP_16316370.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
gi|379985231|emb|CCF88643.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
Length = 375
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 7 ETDDALASLCEAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 62
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 63 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 111
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 112 RPLSWGFAAMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 162
>gi|378955325|ref|YP_005212812.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|409249848|ref|YP_006885663.1| RNase D, processes tRNA precursor [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|320085676|emb|CBY95454.1| RNase D, processes tRNA precursor [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|357205936|gb|AET53982.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
Length = 371
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 3 ETDDALASLCEAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 58
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 59 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 107
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 108 RPLSWGFAAMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 158
>gi|375118800|ref|ZP_09763967.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Dublin
str. SD3246]
gi|326623067|gb|EGE29412.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Dublin
str. SD3246]
Length = 371
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 3 ETDDALASLCEAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 58
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 59 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 107
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 108 RPLSWGFAAMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 158
>gi|145352778|ref|XP_001420714.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580949|gb|ABO99007.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 176
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 17/171 (9%)
Query: 319 VDEVDGLHKAICHIEGCKVVGIDCEWKP-NYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
V+ VD L + H+E CK +D E KG +MQI++ E F+ D++ L
Sbjct: 10 VETVDALEELAAHLEECKEFAVDLEHHSYRSFKGF----TCLMQISTRERDFVVDVLALR 65
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDI---QNVF 434
V D L + LK+ + D++ L +G L D V
Sbjct: 66 SHVRDAL----GKAFADADKLKVMHGADNDVQWLQKDFGMF-----VSCLFDTGQAARVL 116
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ P GL+ L G NK + ++W RPL++ +EYA D LL +
Sbjct: 117 ELPSKGLAYLLHHYCGIKANKRFQLADWRLRPLTKEMVEYARGDTHHLLYV 167
>gi|118348280|ref|XP_001007615.1| 3'-5' exonuclease family protein [Tetrahymena thermophila]
gi|89289382|gb|EAR87370.1| 3'-5' exonuclease family protein [Tetrahymena thermophila SB210]
Length = 964
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 28/182 (15%)
Query: 318 WVDEVDGLHKAIC--HIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
+++++D I IE + GID E+ K + V +QI++ M F+ D +
Sbjct: 753 FINQIDSDESRILKEEIEKNSIFGIDLEYYSEN-KDKNLGFVCTIQISTVNMDFMIDAMA 811
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF- 434
L + +L+ L + +K+ + + DIK L + + +DI N+F
Sbjct: 812 LRNQINQLLNKSL---FLNKTKIKILHGCENDIKWLKNDFD-----------IDIVNLFD 857
Query: 435 ----------KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQ 484
K+ L L++ LG L+K+ + S+W RPL + YA +D+ +LL+
Sbjct: 858 TMFAEMIIKNKQQSYSLKNLSQDYLGVELDKSYQISDWRIRPLPTPMMNYARVDSFILLR 917
Query: 485 IF 486
+F
Sbjct: 918 LF 919
>gi|418021934|ref|ZP_12660921.1| 3'-5' exonuclease [Shewanella baltica OS625]
gi|353538159|gb|EHC07714.1| 3'-5' exonuclease [Shewanella baltica OS625]
Length = 315
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 79/162 (48%), Gaps = 12/162 (7%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
+++ E D + + ++ V+G D E + ++ +G + + +S++QIA+ + ++F
Sbjct: 113 EVVQPSEFDAV---VARLQAEPVLGFDTETRASFERGVQ-HPLSLIQIATADACYLFQHA 168
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF 434
L E + L +L+ ILK+G + D + L +G + ++ + +
Sbjct: 169 ILGEQF-----TQLKTVLEDENILKVGVGLRSDAQALKRQWG-INVTSKLDLNWALAQLG 222
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRN--SNWEQRPLSQNQLEY 474
E + G L +LG ++K ++ SNW+ PLS Q++Y
Sbjct: 223 AEKEMGTRQLVATLLGTRIDKPKKITLSNWQHVPLSGAQIDY 264
>gi|224089887|ref|XP_002308852.1| predicted protein [Populus trichocarpa]
gi|222854828|gb|EEE92375.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 87/195 (44%), Gaps = 23/195 (11%)
Query: 301 VHSRFLHLKELVVEDIIWVDEVD-GLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSI 359
+H+ H V W+ E LH+ + +VG+D EW+PN + + N V+
Sbjct: 27 IHTLVTHTPSFVN---TWIAETQQKLHQNNNPADHPLLVGLDIEWRPNRTRQIE-NPVAT 82
Query: 360 MQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELE 419
+Q+++ + IF L+ +P L L + +G + D+++L Y
Sbjct: 83 LQLSTGKDCLIFQLLHCPTGIP----QSLYDFLSNKNYTFVGVGIEGDVEKLVEGYD--- 135
Query: 420 CFKHYEMLLDIQNVFKEPKG-------GLSGLAEKILGAGLNKTRR--NSNWEQRPLSQN 470
+D++ + E G G+ L ++ILG + K +R S W+ L+ +
Sbjct: 136 --VSMGNAVDLRVLAAEKLGAEQWKNSGIKSLVKEILGKQIEKPKRVTMSRWDNEWLTGD 193
Query: 471 QLEYAALDAVVLLQI 485
Q++YA LDA + +I
Sbjct: 194 QVQYACLDAFLCYKI 208
>gi|437978303|ref|ZP_20853164.1| ribonuclease D, partial [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-5646]
gi|435338591|gb|ELP07812.1| ribonuclease D, partial [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-5646]
Length = 371
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 3 ETDDALASLCEAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 58
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 59 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 107
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 108 RPLSWGFAAMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 158
>gi|62180380|ref|YP_216797.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|194734944|ref|YP_002114851.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197248423|ref|YP_002146207.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|197301010|ref|ZP_02662940.2| ribonuclease D [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|205360221|ref|ZP_02681919.2| ribonuclease D [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|375114709|ref|ZP_09759879.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
gi|437838802|ref|ZP_20846059.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|440764753|ref|ZP_20943777.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Agona
str. SH11G1113]
gi|440768172|ref|ZP_20947145.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Agona
str. SH08SF124]
gi|440774621|ref|ZP_20953508.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Agona
str. SH10GFN094]
gi|452119992|ref|YP_007470240.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Javiana
str. CFSAN001992]
gi|62128013|gb|AAX65716.1| RNase D, processes tRNA precursor [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|194710446|gb|ACF89667.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197212126|gb|ACH49523.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|197289302|gb|EDY28669.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|205350690|gb|EDZ37321.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|322714855|gb|EFZ06426.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
gi|435298172|gb|ELO74414.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|436412844|gb|ELP10782.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Agona
str. SH10GFN094]
gi|436415436|gb|ELP13355.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Agona
str. SH11G1113]
gi|436418052|gb|ELP15938.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Agona
str. SH08SF124]
gi|451908996|gb|AGF80802.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Javiana
str. CFSAN001992]
Length = 375
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 7 ETDDALASLCEAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 62
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 63 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 111
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 112 RPLSWGFAAMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 162
>gi|409083098|gb|EKM83455.1| hypothetical protein AGABI1DRAFT_32248 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 374
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 80/180 (44%), Gaps = 24/180 (13%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
V G D EWKP + KG N VS++QIA+ E++ + + + E S L L +P
Sbjct: 68 VYGFDIEWKPTFRKGQPENPVSLIQIANHEVILLLQVSAMRE-----FPSKLHEFLVNPN 122
Query: 397 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK-----EPKG------GLSGLA 445
K G Q D K+L +C +D+ + + E KG GL+ +
Sbjct: 123 FGKAGAGIQGDTKKLYK-----DCRADVRNCVDLSLLARTVDNAEWKGRYNDPLGLARMT 177
Query: 446 EKILGAGLNKTR-RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSEGHDK 504
L K + SNWE L++ Q EYAA DA I+ + S P+ V++ H +
Sbjct: 178 AAYKDRKLVKGKITRSNWENL-LTEPQQEYAANDAHAGYVIYMRLMSM-MPSLVTQPHAR 235
>gi|198244835|ref|YP_002215323.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|445141369|ref|ZP_21385391.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Dublin
str. SL1438]
gi|445151870|ref|ZP_21390573.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Dublin
str. HWS51]
gi|197939351|gb|ACH76684.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|444851071|gb|ELX76166.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Dublin
str. SL1438]
gi|444855013|gb|ELX80066.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Dublin
str. HWS51]
Length = 375
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 7 ETDDALASLCEAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 62
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 63 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 111
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 112 RPLSWGFAAMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 162
>gi|195873245|ref|ZP_02696622.2| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|195634367|gb|EDX52719.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
Length = 375
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 7 ETDDALASLCEAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 62
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 63 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 111
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 112 RPLSWGFAAMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 162
>gi|417510301|ref|ZP_12175248.1| Ribonuclease D [Salmonella enterica subsp. enterica serovar
Senftenberg str. A4-543]
gi|418762956|ref|ZP_13319081.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35185]
gi|418765824|ref|ZP_13321905.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35199]
gi|418772533|ref|ZP_13328537.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21539]
gi|418777423|ref|ZP_13333352.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 33953]
gi|418778984|ref|ZP_13334891.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35188]
gi|418785893|ref|ZP_13341719.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21559]
gi|419788295|ref|ZP_14313986.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. Levine 1]
gi|419793681|ref|ZP_14319299.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. Levine 15]
gi|353646763|gb|EHC90084.1| Ribonuclease D [Salmonella enterica subsp. enterica serovar
Senftenberg str. A4-543]
gi|392616607|gb|EIW99039.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. Levine 15]
gi|392617809|gb|EIX00224.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. Levine 1]
gi|392732647|gb|EIZ89858.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21539]
gi|392735290|gb|EIZ92467.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35185]
gi|392739577|gb|EIZ96710.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35199]
gi|392743882|gb|EJA00944.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 33953]
gi|392750765|gb|EJA07725.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21559]
gi|392754434|gb|EJA11351.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35188]
Length = 371
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 3 ETDDALASLCEAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 58
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 59 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 107
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 108 RPLSWGFAAMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 158
>gi|205352517|ref|YP_002226318.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205359829|ref|ZP_02832566.2| ribonuclease D [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|207856676|ref|YP_002243327.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|375123325|ref|ZP_09768489.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|421370426|ref|ZP_15820591.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|421377914|ref|ZP_15828003.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|421382522|ref|ZP_15832568.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|421401207|ref|ZP_15851083.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|421410558|ref|ZP_15860339.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|421412823|ref|ZP_15862577.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|421416816|ref|ZP_15866535.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|421421811|ref|ZP_15871479.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|421431369|ref|ZP_15880954.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|421446826|ref|ZP_15896238.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|421447936|ref|ZP_15897332.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|436609465|ref|ZP_20513733.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|436717795|ref|ZP_20518902.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|436799058|ref|ZP_20523612.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|437139868|ref|ZP_20682132.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|437155284|ref|ZP_20691503.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|437163091|ref|ZP_20696445.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|437177227|ref|ZP_20703707.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|437186380|ref|ZP_20709609.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|437261268|ref|ZP_20718338.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|437286468|ref|ZP_20730122.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|437321170|ref|ZP_20738519.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|437335914|ref|ZP_20742831.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|437783039|ref|ZP_20836611.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|437813410|ref|ZP_20841812.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|437901829|ref|ZP_20849870.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|438090188|ref|ZP_20860490.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|438101081|ref|ZP_20864032.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|438112342|ref|ZP_20868939.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|438139817|ref|ZP_20874842.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|445129044|ref|ZP_21380592.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|445174933|ref|ZP_21397176.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|445184741|ref|ZP_21398859.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|445231196|ref|ZP_21405673.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|445254177|ref|ZP_21409151.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
gi|445334237|ref|ZP_21415131.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|445346500|ref|ZP_21418793.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|205272298|emb|CAR37177.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205342684|gb|EDZ29448.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|206708479|emb|CAR32800.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|326627575|gb|EGE33918.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|395997219|gb|EJI06260.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|395997630|gb|EJI06670.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|396006509|gb|EJI15472.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|396021272|gb|EJI30098.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|396022691|gb|EJI31504.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|396039911|gb|EJI48535.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|396041126|gb|EJI49749.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|396044993|gb|EJI53588.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|396053316|gb|EJI61813.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|396062408|gb|EJI70821.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|396074233|gb|EJI82524.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|434940016|gb|ELL46726.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|434960118|gb|ELL53525.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|434970190|gb|ELL62823.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|434985920|gb|ELL77600.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|435131273|gb|ELN18500.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|435138152|gb|ELN25179.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|435142341|gb|ELN29252.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|435154907|gb|ELN41465.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|435158755|gb|ELN45134.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|435163724|gb|ELN49860.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|435184365|gb|ELN69294.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|435196768|gb|ELN81092.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|435197879|gb|ELN82128.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|435296640|gb|ELO73003.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|435299297|gb|ELO75452.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|435316759|gb|ELO89872.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|435321037|gb|ELO93502.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|435324653|gb|ELO96581.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|435330420|gb|ELP01686.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|444854354|gb|ELX79418.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|444858791|gb|ELX83765.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|444863542|gb|ELX88363.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|444870399|gb|ELX94914.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|444875210|gb|ELX99424.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|444877874|gb|ELY02007.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|444889349|gb|ELY12802.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
Length = 375
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 7 ETDDALASLCEAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 62
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 63 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 111
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 112 RPLSWGFAAMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 162
>gi|417357637|ref|ZP_12132726.1| Ribonuclease D [Salmonella enterica subsp. enterica serovar Give
str. S5-487]
gi|353593472|gb|EHC51217.1| Ribonuclease D [Salmonella enterica subsp. enterica serovar Give
str. S5-487]
Length = 371
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 3 ETDDALASLCEAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 58
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 59 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 107
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 108 RPLSWGFAAMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 158
>gi|225679037|gb|EEH17321.1| exosome component 10 [Paracoccidioides brasiliensis Pb03]
Length = 827
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 13/199 (6%)
Query: 296 PEAGFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMN 355
P++ + S + K +VD ++G+H + ++ + ID E ++
Sbjct: 208 PQSTYSISPPVEYKSFDATTATFVDTLEGVHSMLAELKEATEIAIDLE---HHDVHSYHG 264
Query: 356 KVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY 415
V +MQI++ + +I D +K + VL+ T P ILK+ + DI L
Sbjct: 265 LVCLMQISTRDQDWIVDTLKPWREELQVLNEVFT----DPKILKVLHGSTMDIIWLQRDL 320
Query: 416 GE--LECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLE 473
G + F Y + PK L L EK + K + ++W RPL +
Sbjct: 321 GLYIVGLFDTYHGSV----ALNYPKRSLKFLLEKFVNFKAEKIYQMADWRLRPLLPGMFD 376
Query: 474 YAALDAVVLLQIFHHVRSC 492
YA D LL I+ H+R+
Sbjct: 377 YARSDTHYLLYIYDHIRNS 395
>gi|224583693|ref|YP_002637491.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|238912118|ref|ZP_04655955.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
gi|375001041|ref|ZP_09725381.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Infantis str. SARB27]
gi|417333312|ref|ZP_12116904.1| Ribonuclease D [Salmonella enterica subsp. enterica serovar Alachua
str. R6-377]
gi|418514942|ref|ZP_13081132.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Pomona
str. ATCC 10729]
gi|224468220|gb|ACN46050.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|353075729|gb|EHB41489.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Infantis str. SARB27]
gi|353578874|gb|EHC40582.1| Ribonuclease D [Salmonella enterica subsp. enterica serovar Alachua
str. R6-377]
gi|366077385|gb|EHN41400.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Pomona
str. ATCC 10729]
Length = 371
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 3 ETDDALASLCEAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 58
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 59 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 107
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 108 RPLSWGFAAMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 158
>gi|396483292|ref|XP_003841672.1| similar to exosome complex exonuclease Rrp6 [Leptosphaeria maculans
JN3]
gi|312218247|emb|CBX98193.1| similar to exosome complex exonuclease Rrp6 [Leptosphaeria maculans
JN3]
Length = 783
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 83/198 (41%), Gaps = 13/198 (6%)
Query: 296 PEAGFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMN 355
P + + H+ + I+VD + L + ++ K + +D E N +
Sbjct: 195 PPSLYKHAEPQRYEPFESTTAIFVDTPEALASMLAELKTAKEIAVDLEHHDNR---SYIG 251
Query: 356 KVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY 415
VS+MQI++ +I D +K + CL + +P I+K+ + DI L
Sbjct: 252 IVSLMQISTRNQDWIVDTLKPWRRKLE----CLNEVFANPDIIKVLHGAYMDIMWLQRDL 307
Query: 416 G--ELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLE 473
G + F Y + P L+ L ++ +G K + ++W RPL + E
Sbjct: 308 GLYVVGLFDTYHAARSL----GYPGASLAYLLDRFIGFKAQKQYQIADWRIRPLGKELFE 363
Query: 474 YAALDAVVLLQIFHHVRS 491
YA D LL IF ++R+
Sbjct: 364 YARADTHFLLYIFDNMRN 381
>gi|418802246|ref|ZP_13357874.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35202]
gi|392778088|gb|EJA34769.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35202]
Length = 371
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICHI-EGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 3 ETDDALASLCEVVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 58
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 59 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 107
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 108 RPLSWGFAAMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 158
>gi|160876618|ref|YP_001555934.1| 3'-5' exonuclease [Shewanella baltica OS195]
gi|378709826|ref|YP_005274720.1| 3'-5' exonuclease [Shewanella baltica OS678]
gi|160862140|gb|ABX50674.1| 3'-5' exonuclease [Shewanella baltica OS195]
gi|315268815|gb|ADT95668.1| 3'-5' exonuclease [Shewanella baltica OS678]
Length = 315
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 79/162 (48%), Gaps = 12/162 (7%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
+++ E D + + ++ V+G D E + ++ +G + + +S++QIA+ + ++F
Sbjct: 113 EVVQPSEFDAV---VARLQAEPVLGFDTETRASFERGVQ-HPLSLIQIATADACYLFQHA 168
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF 434
L E + L +L+ ILK+G + D + L +G + ++ + +
Sbjct: 169 ILGEQF-----TQLKTVLEDENILKVGVGLRSDAQALKRQWG-INVTSKLDLNWALAQLG 222
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRN--SNWEQRPLSQNQLEY 474
E + G L +LG ++K ++ SNW+ PLS Q++Y
Sbjct: 223 AEKEMGTRQLVATLLGTRIDKPKKITLSNWQHVPLSGAQIDY 264
>gi|409422781|ref|ZP_11259865.1| ribonuclease D [Pseudomonas sp. HYS]
Length = 377
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 67/136 (49%), Gaps = 7/136 (5%)
Query: 356 KVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY 415
K ++Q+ ++ D +++ + P L +L+ P ++K+ + D++ L+
Sbjct: 42 KAGLIQVGDGARAYLIDPLRIGDWQP------LAGLLEDPQVIKVLHACSEDLEVLSRLT 95
Query: 416 GELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYA 475
G L ++ L + G S L +++LG L K S+W QRPLS+ Q+ YA
Sbjct: 96 GSLPA-PLFDTQLAAGYLNLGFSMGYSRLVQEVLGIDLPKGETRSDWLQRPLSETQVSYA 154
Query: 476 ALDAVVLLQIFHHVRS 491
A DAV L +++ +R
Sbjct: 155 AEDAVHLAELYERLRP 170
>gi|339999645|ref|YP_004730528.1| ribonuclease D [Salmonella bongori NCTC 12419]
gi|339513006|emb|CCC30750.1| ribonuclease D [Salmonella bongori NCTC 12419]
Length = 375
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 20/168 (11%)
Query: 323 DGLHKAICHIEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAEDVP 381
D L + C + +D E +V+ ++ ++Q+ V + D I + + P
Sbjct: 10 DALASLCAAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGAHVALIDPIGITDWSP 65
Query: 382 DVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF----KEP 437
L +L+ GI K + D++ ++GEL E L+D Q + +
Sbjct: 66 ------LKAVLRDAGITKFLHAGSEDLEVFLKAFGELP-----EPLIDTQILAAFCGRPL 114
Query: 438 KGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 115 SWGFASMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 162
>gi|55773858|dbj|BAD72396.1| hypothetical protein [Oryza sativa Japonica Group]
gi|55773956|dbj|BAD72483.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 298
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 333 EGCKVVGIDCEWKPNYVKGCKM-NKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRI 391
+G +VGID EW+ +++ K KV+++Q+ +F + + VP L
Sbjct: 130 QGGLIVGIDTEWRTDHLPNGKTCYKVAVLQLCVGRRCLLFQIYQAGNMVPHEL----AEF 185
Query: 392 LQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQ----NVFKEP---KGGLSGL 444
L P + +G D+++LA+ +C +D++ V +P + GL L
Sbjct: 186 LADPSVRFVGVAVNNDMQRLAN-----DCNLRVACAVDLRYAAAAVLGQPELARAGLKRL 240
Query: 445 AEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
A ++GA + K + S W + L+ Q+ YA +DA V +I + S
Sbjct: 241 ALTVMGAHMEKEKNITKSRWGEPTLTWEQVNYACIDAYVSYEIGRRLLS 289
>gi|399007815|ref|ZP_10710314.1| ribonuclease D [Pseudomonas sp. GM17]
gi|398119266|gb|EJM08970.1| ribonuclease D [Pseudomonas sp. GM17]
Length = 377
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 83/178 (46%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++Q+ + ++ D
Sbjct: 4 DIHWIRDNDSLGQFCTEWQKLPFVALDTE----FMRVDTFYPIAGLLQVGDGQRAYLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + + P L +L++ ++K+ + D++ L G L ++ L +
Sbjct: 60 LTIDDWQP------LAALLENSAVVKVVHACSEDLEVLLRLTGSLPA-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++LG L K S+W QRPLS+ Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLGIELPKGETRSDWLQRPLSETQVSYAAEDAVHLAEVFTRLRP 170
>gi|404498237|ref|YP_006722343.1| ribonuclease D [Geobacter metallireducens GS-15]
gi|418065969|ref|ZP_12703338.1| 3'-5' exonuclease [Geobacter metallireducens RCH3]
gi|78195834|gb|ABB33601.1| ribonuclease D, putative [Geobacter metallireducens GS-15]
gi|373561476|gb|EHP87711.1| 3'-5' exonuclease [Geobacter metallireducens RCH3]
Length = 382
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 355 NKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHS 414
KV ++Q + I D + +A+ P L + +P I K+ + DI+ L
Sbjct: 44 EKVCLIQFTVPGLAAIVDPLAVADLAP------LAPVFANPSIRKVFHGADYDIRSLHRD 97
Query: 415 YGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEY 474
+G +E ++ ++ Q E + GL+ + K G L+K + ++W +RPL+ +EY
Sbjct: 98 FG-IEVNNLFDTMIACQ-FLGEREFGLAAVLRKRFGVELDKQYQRADWSRRPLTAGMIEY 155
Query: 475 AALDAVVLLQI 485
AA D +L+++
Sbjct: 156 AAKDTTLLIEL 166
>gi|398861072|ref|ZP_10616709.1| ribonuclease D [Pseudomonas sp. GM79]
gi|398233675|gb|EJN19587.1| ribonuclease D [Pseudomonas sp. GM79]
Length = 377
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI ++ D
Sbjct: 4 DIHWIRDNDSLGQFCAEWQQLPFVALDTE----FMRVDTFYPIAGLLQIGDGVRAYLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + P L +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LTIDNWQP------LAALLENPAVVKVLHACSEDLEVLLRLTGSLPA-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++LG L K S+W QRPLS Q+ YAA DA+ L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLGIDLPKGETRSDWLQRPLSDTQISYAAEDALHLAEVFVQLRP 170
>gi|345884427|ref|ZP_08835834.1| hypothetical protein HMPREF0666_02010 [Prevotella sp. C561]
gi|345042815|gb|EGW46908.1| hypothetical protein HMPREF0666_02010 [Prevotella sp. C561]
Length = 228
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 17/175 (9%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
KA+ ++ ++GID E +P + KG + KV+++Q E+ F+F L + VPD
Sbjct: 41 KAVNYLLSKDIIGIDTETRPVFKKGQR-RKVALLQACDHEVCFLFRLNLIG--VPD---- 93
Query: 387 CLTRILQSPGILKLGYNFQCDI----KQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLS 442
C+ R L+ + K+G + D+ ++L G + Y L I+++ L
Sbjct: 94 CIKRFLEDTTVPKVGLSLGDDMLMLHQRLDFKPGYFIDLQDYVKSLGIEDM------SLQ 147
Query: 443 GLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
L + + K + SNWE L+ Q YA+ DA ++++ + D
Sbjct: 148 KLYANVFHERIVKREQLSNWENEVLNDKQKLYASTDAWTCIKLYERLHELKHSGD 202
>gi|194445618|ref|YP_002041074.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|200390008|ref|ZP_03216619.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|416651633|ref|ZP_11811150.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|418486637|ref|ZP_13055587.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|418493656|ref|ZP_13060118.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|418497681|ref|ZP_13064098.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|418502413|ref|ZP_13068785.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|418527646|ref|ZP_13093602.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|418817820|ref|ZP_13373304.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21538]
gi|418820730|ref|ZP_13376162.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22425]
gi|194404281|gb|ACF64503.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|199602453|gb|EDZ00999.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|366063801|gb|EHN28012.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|366073083|gb|EHN37160.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|366075438|gb|EHN39495.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|366075769|gb|EHN39821.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|366827380|gb|EHN54286.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|372204274|gb|EHP17802.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|392787359|gb|EJA43901.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21538]
gi|392792290|gb|EJA48754.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22425]
Length = 375
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 7 ETDDALASLCEAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 62
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 63 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 111
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 112 RPLSWGFASMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 162
>gi|237755371|ref|ZP_04583999.1| DNA polymerase I [Sulfurihydrogenibium yellowstonense SS-5]
gi|237692455|gb|EEP61435.1| DNA polymerase I [Sulfurihydrogenibium yellowstonense SS-5]
Length = 586
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 86/167 (51%), Gaps = 12/167 (7%)
Query: 355 NKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHS 414
+K+ ++QI +E F+ DL+K+ P+V+ + + ++++ GI+ G+N + D+K L +
Sbjct: 43 DKIRLIQIGDEENTFVIDLLKIN---PEVVKNHIQNLIENKGII--GHNLKFDLKFLKTN 97
Query: 415 YGELECFKHYEMLLDIQNVFK---EPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQ 471
L ++ ++ Q + K + LS A++ + ++KT + S W + LS Q
Sbjct: 98 LNILPKIV-FDTMIASQILAKGDNSQRHSLSASAKRFVSLDVDKTYQKSPWWAKDLSPEQ 156
Query: 472 LEYAALDAVVLLQIFHHVRSCSQPTDVSEGHDKIEWKSYIVSHMDNP 518
+EYAA D L +F ++ ++ H K +++ V + NP
Sbjct: 157 IEYAAKDIDALRHLFKEEKNQLNQDNL---HKKASGETFKVFGVINP 200
>gi|417325929|ref|ZP_12111761.1| Ribonuclease D [Salmonella enterica subsp. enterica serovar
Adelaide str. A4-669]
gi|353574652|gb|EHC37625.1| Ribonuclease D [Salmonella enterica subsp. enterica serovar
Adelaide str. A4-669]
Length = 390
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 22 ETDDALASLCEAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 77
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 78 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 126
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 127 RPLSWGFASMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 177
>gi|338532921|ref|YP_004666255.1| putative ribonuclease D [Myxococcus fulvus HW-1]
gi|337259017|gb|AEI65177.1| putative ribonuclease D [Myxococcus fulvus HW-1]
Length = 378
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 17/180 (9%)
Query: 324 GLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDV 383
G A +E + + +D E + ++ +Q+A+D+ VF+ D ++ P V
Sbjct: 5 GEESATHKLEQAREIAVDLEADSMHAFRARL---CFLQLATDDEVFLLDTLQ-----PGV 56
Query: 384 LDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQ---NVFKEPKGG 440
+ L ++ P K + Q D++ LA E + L D + PK G
Sbjct: 57 VPGMLAPLMADPARTKFFHAAQGDLQFLA------EVGVRVQGLFDTHRAATLLGWPKVG 110
Query: 441 LSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSE 500
L+ +A + LG L K + S++ RPL EY A D L ++ VR + D+ E
Sbjct: 111 LADIARERLGVELPKEHQQSDFSIRPLPPGMREYIANDVRYLCELGRQVRDACREADILE 170
>gi|396458114|ref|XP_003833670.1| hypothetical protein LEMA_P064310.1 [Leptosphaeria maculans JN3]
gi|312210218|emb|CBX90305.1| hypothetical protein LEMA_P064310.1 [Leptosphaeria maculans JN3]
Length = 799
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 24/173 (13%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAED--VPDVLDSCLTRILQ 393
KV+G D EWKP + VS++Q+A ++ + +F I L E V +++ L +L+
Sbjct: 249 KVLGFDIEWKPFGIPSSIKQNVSLIQLACEDRIALFH-ISLFEGTAVEELMPPSLKAVLE 307
Query: 394 SPGILKLGYNFQCDIKQLA-----HSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKI 448
SP I K+G + D +LA + G E + + ++ + K+ L GLA ++
Sbjct: 308 SPDIYKVGVAIKGDFSRLARYLGIQARGVFELSRLHNLVQYYEADPKQVNNRLVGLAAQV 367
Query: 449 ---------LGAGLN------KTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
G L+ + R S+W PL +Q+ YAA DA +++
Sbjct: 368 HQHLQLPLYKGEPLDDDPETSSSVRESDW-SLPLGFSQIHYAAADAYAGFRLY 419
>gi|257483935|ref|ZP_05637976.1| ribonuclease D [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|416015238|ref|ZP_11562851.1| ribonuclease D [Pseudomonas syringae pv. glycinea str. B076]
gi|416028348|ref|ZP_11571404.1| ribonuclease D [Pseudomonas syringae pv. glycinea str. race 4]
gi|422592336|ref|ZP_16666944.1| ribonuclease D [Pseudomonas syringae pv. lachrymans str. M301315]
gi|422683803|ref|ZP_16742060.1| ribonuclease D [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|320325216|gb|EFW81283.1| ribonuclease D [Pseudomonas syringae pv. glycinea str. B076]
gi|320327790|gb|EFW83798.1| ribonuclease D [Pseudomonas syringae pv. glycinea str. race 4]
gi|330989388|gb|EGH87491.1| ribonuclease D [Pseudomonas syringae pv. lachrymans str. M301315]
gi|331013134|gb|EGH93190.1| ribonuclease D [Pseudomonas syringae pv. tabaci str. ATCC 11528]
Length = 377
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI + ++ D
Sbjct: 4 DIHWIRDDDSLARHCAEWQLLPFVALDTE----FMRVDTFYPIAALLQIGDGQSAWLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + + P L+ +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LLINDWQP------LSALLENPDVIKVVHACSEDLEVLLRLTGSLPV-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++L L K S+W QRPLS+ Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLNIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAELFSILRP 170
>gi|295659299|ref|XP_002790208.1| exosome component 3'-5' exonuclease [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226281913|gb|EEH37479.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 827
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 13/199 (6%)
Query: 296 PEAGFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMN 355
P++ + S + K +VD ++G+H + ++ + ID E ++
Sbjct: 208 PQSIYSISPPVEYKSFDATTATFVDTLEGVHSMLAELKEATEIAIDLE---HHDVHSYHG 264
Query: 356 KVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY 415
V +MQI++ E +I D +K + VL+ T P ILK+ + DI L
Sbjct: 265 LVCLMQISTREQDWIVDTLKPWREELQVLNEVFT----DPKILKVLHGSTMDIIWLQRDL 320
Query: 416 GE--LECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLE 473
G + F Y + PK L L EK + K + ++W RPL +
Sbjct: 321 GLYIVGLFDTYHGSV----ALNYPKRSLKFLLEKFVNFKAEKKYQMADWRLRPLLPGMFD 376
Query: 474 YAALDAVVLLQIFHHVRSC 492
YA D LL I+ H+R+
Sbjct: 377 YARSDTHYLLYIYDHIRNS 395
>gi|189217744|ref|NP_001121313.1| exonuclease 3'-5' domain containing 2 [Xenopus laevis]
gi|115528351|gb|AAI24972.1| LOC100158397 protein [Xenopus laevis]
Length = 499
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 21/161 (13%)
Query: 340 IDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILK 399
+DCEW V G K + VS++Q+AS + + + L +L + G+LK
Sbjct: 1 MDCEWVS--VDG-KASPVSLLQMASYSGFCVLVRLPQLTSSGCTIPKTLLELLANSGVLK 57
Query: 400 LGYNFQCDIKQLAHSYG---------ELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILG 450
+G + D +L + YG +H +L QN L L+E IL
Sbjct: 58 VGVGCREDSSKLLNDYGLSVKGCVDIRYLAMRHRRDIL--QNTL-----SLKSLSETILS 110
Query: 451 AGLNKT--RRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L+K+ R SNW+ +QNQ+ YAA DA V + +F H+
Sbjct: 111 FPLDKSFQLRCSNWDAEEFTQNQVLYAARDAQVSVALFLHL 151
>gi|427766043|ref|ZP_18966626.1| ribonuclease D, partial [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
gi|414065358|gb|EKT46116.1| ribonuclease D, partial [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
Length = 392
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 24 ETDDALASLCEAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 79
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 80 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 128
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 129 RPLSWGFASMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 179
>gi|407365829|ref|ZP_11112361.1| ribonuclease D [Pseudomonas mandelii JR-1]
Length = 377
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI ++ D
Sbjct: 4 DIHWIRDNDSLGQFCAEWQQLPFVALDTE----FMRVDTFYPIAGLLQIGDGVRAYLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + P L +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LTIDNWQP------LAALLENPAVVKVVHACSEDLEVLLRLTGSLPA-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++LG L K S+W QRPLS Q+ YAA DA+ L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLGIDLPKGETRSDWLQRPLSDTQISYAAEDALHLAEVFIQLRP 170
>gi|145252306|ref|XP_001397666.1| exosome component 3'-5' exonuclease [Aspergillus niger CBS 513.88]
gi|134083214|emb|CAK42852.1| unnamed protein product [Aspergillus niger]
gi|350633598|gb|EHA21963.1| hypothetical protein ASPNIDRAFT_49025 [Aspergillus niger ATCC 1015]
Length = 782
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 13/176 (7%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
+VD ++G+ + + ++ K + ID E ++ VS+MQI++ + ++ D +K
Sbjct: 230 FVDTLEGVKEMLEELKAAKEIAIDLE---HHDVHSYQGLVSLMQISTRDKDWVVDTLKPW 286
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYG--ELECFKHYEMLLDIQNVFK 435
+ VL+ T P ILK+ + DI L G + F Y
Sbjct: 287 REELQVLNEVFT----DPNILKVLHGSSMDIIWLQRDLGLYVVGMFDTYHAAC----ALN 338
Query: 436 EPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
PK L L +K + +K + ++W RP+ + +YA D LL I+ H+R+
Sbjct: 339 YPKRSLKFLLQKFVNFEADKRYQMADWRIRPIPEGMFDYARSDTHYLLHIYDHIRN 394
>gi|417378667|ref|ZP_12147255.1| Ribonuclease D, partial [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|417390507|ref|ZP_12153981.1| Ribonuclease D, partial [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|417530212|ref|ZP_12185567.1| Ribonuclease D, partial [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|353618592|gb|EHC69226.1| Ribonuclease D, partial [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|353619765|gb|EHC70062.1| Ribonuclease D, partial [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|353666534|gb|EHD04320.1| Ribonuclease D, partial [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
Length = 387
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 19 ETDDALASLCEAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 74
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 75 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 123
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 124 RPLSWGFAAMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 174
>gi|205357935|ref|ZP_02574364.2| ribonuclease D [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|379700992|ref|YP_005242720.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|383496505|ref|YP_005397194.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|205328669|gb|EDZ15433.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|323130091|gb|ADX17521.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|380463326|gb|AFD58729.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
Length = 390
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 22 ETDDALASLCEAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 77
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 78 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 126
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 127 RPLSWGFASMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 177
>gi|417538852|ref|ZP_12191316.1| Ribonuclease D, partial [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
gi|353665655|gb|EHD03711.1| Ribonuclease D, partial [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
Length = 386
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 18 ETDDALASLCEAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 73
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 74 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 122
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 123 RPLSWGFASMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 173
>gi|221482990|gb|EEE21314.1| 3'-5' exonuclease domain-containing protein, putative [Toxoplasma
gondii GT1]
Length = 1048
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 77/189 (40%), Gaps = 42/189 (22%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
VV +D EW + S++ +A++ VF+ DL+ L L + +P
Sbjct: 811 VVALDLEWTLPHA-------ASVLSLATESRVFLVDLVNDNPVYKATLLQMLRWLFANPF 863
Query: 397 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQ------NVFKEPKGG---------- 440
I KL Y DI +L + G + +D++ N +E + G
Sbjct: 864 IAKLMYQASGDITKLFFALGAVGSPGALVHCIDLRKGRHLANSERELREGVIAKEHFLEK 923
Query: 441 -------------------LSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVV 481
L + ++L A L+K+ + SNW RPL+ +Q YAALDA V
Sbjct: 924 NEEETPERYMRPVKRRFPSLQEMCRQVLHADLDKSEQRSNWNMRPLTASQAHYAALDAYV 983
Query: 482 LLQIFHHVR 490
L+ + +R
Sbjct: 984 LILLEAALR 992
>gi|16765158|ref|NP_460773.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|194448143|ref|YP_002045863.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|197262566|ref|ZP_03162640.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|205358997|ref|ZP_02666341.2| ribonuclease D [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|378445223|ref|YP_005232855.1| Ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|378450396|ref|YP_005237755.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|378699693|ref|YP_005181650.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|378989157|ref|YP_005252321.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|419730526|ref|ZP_14257472.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|419732212|ref|ZP_14259118.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|419739067|ref|ZP_14265821.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|419743807|ref|ZP_14270470.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|419748475|ref|ZP_14274971.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|421570545|ref|ZP_16016233.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|421574796|ref|ZP_16020417.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|421579596|ref|ZP_16025158.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|421583034|ref|ZP_16028563.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|422025995|ref|ZP_16372414.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|427550121|ref|ZP_18927722.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|427565978|ref|ZP_18932445.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|427585925|ref|ZP_18937227.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|427609190|ref|ZP_18942090.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|427633495|ref|ZP_18946987.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|427656047|ref|ZP_18951752.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|427661189|ref|ZP_18956661.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|427668390|ref|ZP_18961463.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|16420349|gb|AAL20732.1| RNase D [Salmonella enterica subsp. enterica serovar Typhimurium
str. LT2]
gi|194406447|gb|ACF66666.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|197240821|gb|EDY23441.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|205339484|gb|EDZ26248.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|261247002|emb|CBG24819.1| Ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267993774|gb|ACY88659.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301158341|emb|CBW17840.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|332988704|gb|AEF07687.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|381294534|gb|EIC35673.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|381300401|gb|EIC41463.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|381303061|gb|EIC44090.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|381311372|gb|EIC52191.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|381314128|gb|EIC54903.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|402521071|gb|EJW28409.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|402523847|gb|EJW31155.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|402524996|gb|EJW32293.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|402532500|gb|EJW39692.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|414018870|gb|EKT02503.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|414019334|gb|EKT02951.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|414033095|gb|EKT16069.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|414035013|gb|EKT17918.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|414037975|gb|EKT20710.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|414047842|gb|EKT30107.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|414049294|gb|EKT31511.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|414053726|gb|EKT35705.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|414059910|gb|EKT41453.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
Length = 375
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 7 ETDDALASLCEAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 62
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 63 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 111
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 112 RPLSWGFASMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 162
>gi|418859987|ref|ZP_13414574.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19470]
gi|392828353|gb|EJA84048.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19470]
Length = 371
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 3 ETDDALASLCEAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 58
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 59 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 107
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 108 RPLSWGFASMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 158
>gi|170112858|ref|XP_001887630.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164637532|gb|EDR01817.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 854
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 20/181 (11%)
Query: 317 IWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKL 376
IW+ D L + ++ + +D E ++ + +MQI+ E +I DL+ L
Sbjct: 243 IWISTPDELQAMLAKLKKATEIAVDLE---HHSYRSYTGFLCLMQISDRENDWIVDLLAL 299
Query: 377 AEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGE-----LECFKHYEMLLDIQ 431
+++ L I P I+K+ + + D+ L + + F H LLD
Sbjct: 300 RDEI-----EQLNEIFTDPKIVKVLHGAESDVVWLQQDFNVYIVNLFDTF-HASKLLDF- 352
Query: 432 NVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
P+ GL+ L E +K + ++W RPL Q L+YA D LL I+ ++R+
Sbjct: 353 -----PRHGLANLLEMYCDYIPDKRYQLADWRIRPLPQEMLDYARSDTHFLLFIYDNLRN 407
Query: 492 C 492
Sbjct: 408 A 408
>gi|71735861|ref|YP_273799.1| ribonuclease D [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71556414|gb|AAZ35625.1| ribonuclease D [Pseudomonas syringae pv. phaseolicola 1448A]
Length = 377
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI + ++ D
Sbjct: 4 DIHWIRDDDSLARHCAEWQLLPFVALDTE----FMRVDTFYPIAALLQIGDGQSAWLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + + P L+ +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LLINDWQP------LSALLENPDVIKVVHACSEDLEVLLRLTGSLPV-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++L L K S+W QRPLS+ Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLNIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAELFSILRP 170
>gi|424921925|ref|ZP_18345286.1| ribonuclease D [Pseudomonas fluorescens R124]
gi|404303085|gb|EJZ57047.1| ribonuclease D [Pseudomonas fluorescens R124]
Length = 377
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + + L + + V +D E +++ ++ ++Q+ + ++ D
Sbjct: 4 DIHWIRDNESLAQFCAEWQQLPFVALDTE----FMRVDTFYPIAGLLQVGDGKRAYLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + P L +L++P +LK+ + D++ L G L ++ L +
Sbjct: 60 LTIDAWQP------LAVLLENPAVLKVLHACSEDLEVLLRLTGSLPA-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++LG L K S+W QRPLS Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLGIELPKGETRSDWLQRPLSDTQVSYAAEDAVHLAEVFVQLRP 170
>gi|213648384|ref|ZP_03378437.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Typhi
str. J185]
Length = 371
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 3 ETDDALASLCEAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 58
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 59 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 107
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 108 RPLSWGFASMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 158
>gi|16760707|ref|NP_456324.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Typhi
str. CT18]
gi|29141535|ref|NP_804877.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|25289178|pir||AB0725 ribonuclease D [imported] - Salmonella enterica subsp. enterica
serovar Typhi (strain CT18)
gi|16503004|emb|CAD05500.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Typhi]
gi|29137162|gb|AAO68726.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
Length = 375
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 7 ETDDALASLCEAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 62
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 63 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 111
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 112 RPLSWGFASMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 162
>gi|406861057|gb|EKD14113.1| 3 -5 exonuclease helicase [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1248
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 35/180 (19%)
Query: 331 HIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDL--IKLAEDV-PDVLDSC 387
H KV+G D EWK ++ + ++VS++QIAS+ + + + + + V D++
Sbjct: 316 HFTDAKVIGFDIEWKEKGLRTAR-DQVSLVQIASESRIALMHVAAFPVKDGVRKDLVPPT 374
Query: 388 LTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEK 447
L +I++ P I+K+G + D ++ G L+++ +++K L +
Sbjct: 375 LKKIMEDPSIIKVGVAIKGDCTRVKRWLG-----IDSRSLIELSHLYK-----LVKFSRS 424
Query: 448 ILGAGLNKTR--------------------RNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
A +N+T R S+W Q PL+ Q++YAA D+ LQ++H
Sbjct: 425 KEFASINRTLVSLATQTKEHLHLPMFKGEVRISDWRQ-PLTMEQVQYAASDSYAGLQLYH 483
>gi|328850207|gb|EGF99375.1| hypothetical protein MELLADRAFT_112782 [Melampsora larici-populina
98AG31]
Length = 380
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 20/205 (9%)
Query: 307 HLKELVVEDIIWVDEVDGLHKAICHI--EGCKVVGIDCEWKPNYVKGCKMNKVSIMQIAS 364
HLK L+ E + ++ G A + K + D EW ++ + C S++Q+A
Sbjct: 117 HLKSLLNEVVADGIDIHGPSNANNQSGSKSMKAIAFDMEWCHDWSRKC-ARTTSLIQLAG 175
Query: 365 DEMVFIFDLIKLAEDV--PDVLDSCLTRILQSPGILKLGYNFQCDIKQLAH-----SYGE 417
V I L++L CL ++ S I+K+G D +++ S+ +
Sbjct: 176 RSKVLIIQLVQLDGQKWKEATFPQCLADLITSTEIIKMGAGIISDERKIDQDIWIDSHDQ 235
Query: 418 LECFKHYEMLLDIQNVF----KEPKGG----LSGLAEKILGAGLNKTRR--NSNWEQRPL 467
+ K+Y + D+ F KE G L L ++ L L KT++ SNWE L
Sbjct: 236 IVKLKNYLEINDLIKKFDSQAKEEIGNGTFSLQKLVDRYLNLHLPKTKKLTISNWETTQL 295
Query: 468 SQNQLEYAALDAVVLLQIFHHVRSC 492
+ +Q YAA D V +++I+ + S
Sbjct: 296 TSSQAHYAAADVVTVIRIYERLMSS 320
>gi|213052594|ref|ZP_03345472.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Typhi
str. E00-7866]
gi|213419335|ref|ZP_03352401.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Typhi
str. E01-6750]
gi|213426609|ref|ZP_03359359.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Typhi
str. E02-1180]
gi|213609541|ref|ZP_03369367.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Typhi
str. E98-2068]
gi|289828970|ref|ZP_06546670.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Typhi
str. E98-3139]
gi|378959217|ref|YP_005216703.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Typhi
str. P-stx-12]
gi|374353089|gb|AEZ44850.1| Ribonuclease D [Salmonella enterica subsp. enterica serovar Typhi
str. P-stx-12]
Length = 371
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 3 ETDDALASLCEAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 58
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 59 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 107
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 108 RPLSWGFASMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 158
>gi|418863385|ref|ZP_13417923.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19536]
gi|392833253|gb|EJA88868.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19536]
Length = 371
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 3 ETDDALASLCEAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 58
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 59 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 107
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 108 RPLSWGFASMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 158
>gi|347966136|ref|XP_321572.5| AGAP001549-PA [Anopheles gambiae str. PEST]
gi|333470194|gb|EAA01810.5| AGAP001549-PA [Anopheles gambiae str. PEST]
Length = 824
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 11/158 (6%)
Query: 331 HIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTR 390
H + V+G DCEW N K V+++Q+AS + + + +P L
Sbjct: 70 HCQEYNVLGFDCEWVSNQ---GKRRPVALLQLASHRGLCALIRLCMINRIPQELYD---- 122
Query: 391 ILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILG 450
+L I+K+G + D + L Y L+ ++ + EP G ++ LA ++LG
Sbjct: 123 LLNDDNIIKVGVSPYEDARVLREDY-RLKVESTLDLRYMAERAGLEPLG-IARLANEVLG 180
Query: 451 AGLNK--TRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
L+K R S+WE LS Q++YAA DA V +++F
Sbjct: 181 LTLDKHWKVRCSDWESPELSDRQIKYAASDAHVAVEMF 218
>gi|226288046|gb|EEH43559.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 826
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 13/199 (6%)
Query: 296 PEAGFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMN 355
P++ + S + K +VD ++G+H + ++ + ID E ++
Sbjct: 208 PQSTYSISPPVEYKSFDATTATFVDTLEGVHSMLAELKEATEIAIDLE---HHDVHSYHG 264
Query: 356 KVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY 415
V +MQI++ + +I D +K + VL+ T P ILK+ + DI L
Sbjct: 265 LVCLMQISTRDQDWIVDTLKPWREELQVLNEVFT----DPKILKVLHGSTMDIIWLQRDL 320
Query: 416 GE--LECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLE 473
G + F Y + PK L L EK + K + ++W RPL +
Sbjct: 321 GLYIVGLFDTYHGSV----ALNYPKRSLKFLLEKFVNFKAEKIYQMADWRLRPLLPGMFD 376
Query: 474 YAALDAVVLLQIFHHVRSC 492
YA D LL I+ H+R+
Sbjct: 377 YARSDTHYLLYIYDHIRNS 395
>gi|449437986|ref|XP_004136771.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus]
gi|449506025|ref|XP_004162631.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus]
Length = 210
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
VVG+D EW+PN+ + + N V+ +Q+ IF LI +E ++D L+
Sbjct: 58 VVGLDVEWRPNFDRHFR-NPVATLQLCVGRRCLIFQLIHASETPQSLID-----FLEDDT 111
Query: 397 ILKLGYNFQCDIKQLAHSY--GELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLN 454
+G D+ +L + Y E+ D + GL L ++LG ++
Sbjct: 112 FTFVGVGIDNDVLKLYNDYDLNVANTVDLRELAADEMQSDEFRTAGLKTLGREVLGREID 171
Query: 455 KTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
K R + S W+++ L+ Q+ YA +DA + +I ++ S
Sbjct: 172 KPRNVKLSRWDRQWLNPAQILYATVDAFLSFEIGRYLLS 210
>gi|429332849|ref|ZP_19213559.1| ribonuclease D [Pseudomonas putida CSV86]
gi|428762403|gb|EKX84607.1| ribonuclease D [Pseudomonas putida CSV86]
Length = 377
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Query: 356 KVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY 415
K ++Q+ + F+ D + + + P L +L+ G+ K+ + D++ LA
Sbjct: 42 KAGLIQVGDGQRAFLIDPLLINDWQP------LAGLLEDQGVTKVLHACSEDLEVLARLT 95
Query: 416 GELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYA 475
G L ++ L + G S L +++LG L K S+W QRPLSQ Q+ YA
Sbjct: 96 GSLPV-PLFDTQLAAGYLNLGFSMGYSRLVQEVLGIELPKGETRSDWLQRPLSQTQVSYA 154
Query: 476 ALDAVVLLQIFHHVRS 491
A DAV L +++ +R
Sbjct: 155 AEDAVHLAELYERLRP 170
>gi|317034362|ref|XP_001396222.2| hypothetical protein ANI_1_558114 [Aspergillus niger CBS 513.88]
gi|350638930|gb|EHA27285.1| hypothetical protein ASPNIDRAFT_191992 [Aspergillus niger ATCC
1015]
Length = 309
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 22/168 (13%)
Query: 336 KVVGIDCEWKPNYVKGCKM-NKVSIMQIASDEMVFIFD--LIKLAEDVPDVLDSCLTRIL 392
K++G D EWK + + VS++QIA+ E + +F L + + D++ L +I+
Sbjct: 101 KILGFDMEWKAQASAWNSIQDNVSLIQIANRERIALFHVALFRPGRKISDLVPPSLKQII 160
Query: 393 QSPGILKLGYNFQCDIKQL-------AHSYGELECFKHYEMLL-----DIQNVFKEPKGG 440
+SP I KLG + + D +L AH EL H L+ + + + K P
Sbjct: 161 ESPDITKLGVSIKADCTRLRKYLKVDAHGIFEL---SHLHKLVKYCQTNPKLINKRP-VN 216
Query: 441 LSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
LS E+ LG L K R S+W LS Q++YAA D+ + +F
Sbjct: 217 LSEQVEEHLGLPLEKAEDVRCSDWTVS-LSYRQVQYAASDSYACICLF 263
>gi|161613674|ref|YP_001587639.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Paratyphi B str. SPB7]
gi|416421575|ref|ZP_11689573.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|416433650|ref|ZP_11697073.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|416436471|ref|ZP_11698273.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|416448931|ref|ZP_11706582.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|416451099|ref|ZP_11707992.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|416456421|ref|ZP_11711425.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|416468929|ref|ZP_11718223.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|416481640|ref|ZP_11723374.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|416491744|ref|ZP_11727255.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|416498084|ref|ZP_11730010.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|416504724|ref|ZP_11733306.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|416512072|ref|ZP_11737616.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|416528052|ref|ZP_11743651.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|416535232|ref|ZP_11747596.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|416541711|ref|ZP_11751143.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|416550340|ref|ZP_11755923.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|416562560|ref|ZP_11762260.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|416570809|ref|ZP_11766304.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|416579220|ref|ZP_11771078.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|416585090|ref|ZP_11774643.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|416590022|ref|ZP_11777538.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|416601149|ref|ZP_11784813.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|416604440|ref|ZP_11786200.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|416612114|ref|ZP_11791293.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|416619417|ref|ZP_11795079.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|416627711|ref|ZP_11799157.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|416639130|ref|ZP_11804391.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|416654820|ref|ZP_11812324.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|416666342|ref|ZP_11817416.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|416679489|ref|ZP_11823099.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|416698343|ref|ZP_11828387.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|416704931|ref|ZP_11830543.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|416710917|ref|ZP_11834875.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|416716784|ref|ZP_11839076.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|416721920|ref|ZP_11842979.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|416733502|ref|ZP_11850500.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|416737308|ref|ZP_11852540.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|416753558|ref|ZP_11860886.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|416762219|ref|ZP_11866215.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|416771587|ref|ZP_11872822.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|417372920|ref|ZP_12143087.1| Ribonuclease D [Salmonella enterica subsp. enterica serovar
Inverness str. R8-3668]
gi|417517944|ref|ZP_12180411.1| Ribonuclease D [Salmonella enterica subsp. enterica serovar Uganda
str. R8-3404]
gi|418484162|ref|ZP_13053166.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|418509428|ref|ZP_13075722.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|418809353|ref|ZP_13364905.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21550]
gi|418813508|ref|ZP_13369029.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22513]
gi|418828510|ref|ZP_13383542.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22462]
gi|418833553|ref|ZP_13388476.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM N18486]
gi|418836769|ref|ZP_13391653.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM N1543]
gi|418840456|ref|ZP_13395285.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21554]
gi|418845094|ref|ZP_13399880.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19443]
gi|418850492|ref|ZP_13405208.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 37978]
gi|418852388|ref|ZP_13407090.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19593]
gi|418867001|ref|ZP_13421462.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 4176]
gi|161363038|gb|ABX66806.1| hypothetical protein SPAB_01399 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|322616813|gb|EFY13721.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322618052|gb|EFY14944.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322625723|gb|EFY22542.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322626173|gb|EFY22983.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322633779|gb|EFY30519.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322638933|gb|EFY35626.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322640751|gb|EFY37401.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322644138|gb|EFY40683.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322649210|gb|EFY45648.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322655369|gb|EFY51677.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322660875|gb|EFY57106.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322662828|gb|EFY59035.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322668012|gb|EFY64171.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322674226|gb|EFY70320.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322675419|gb|EFY71493.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322683166|gb|EFY79182.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322686859|gb|EFY82837.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323195248|gb|EFZ80428.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323200159|gb|EFZ85245.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323203843|gb|EFZ88861.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323213750|gb|EFZ98532.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323217380|gb|EGA02099.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323220925|gb|EGA05358.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323224700|gb|EGA08971.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323231403|gb|EGA15516.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323235843|gb|EGA19922.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323240412|gb|EGA24455.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323245305|gb|EGA29305.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323246673|gb|EGA30645.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323253527|gb|EGA37355.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323263330|gb|EGA46866.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323266778|gb|EGA50264.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323268984|gb|EGA52440.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|353603944|gb|EHC58876.1| Ribonuclease D [Salmonella enterica subsp. enterica serovar
Inverness str. R8-3668]
gi|353650392|gb|EHC92771.1| Ribonuclease D [Salmonella enterica subsp. enterica serovar Uganda
str. R8-3404]
gi|363554157|gb|EHL38394.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|363557172|gb|EHL41379.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|363566374|gb|EHL50391.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|363568773|gb|EHL52749.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|363570006|gb|EHL53945.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|363572891|gb|EHL56779.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|363575262|gb|EHL59120.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|366059947|gb|EHN24214.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|366078135|gb|EHN42140.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|392773438|gb|EJA30134.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21550]
gi|392774734|gb|EJA31429.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22513]
gi|392790498|gb|EJA46995.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22462]
gi|392795387|gb|EJA51759.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM N18486]
gi|392801130|gb|EJA57360.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM N1543]
gi|392810946|gb|EJA66958.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21554]
gi|392813903|gb|EJA69867.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19443]
gi|392818342|gb|EJA74226.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 37978]
gi|392829604|gb|EJA85274.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19593]
gi|392840113|gb|EJA95651.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 4176]
Length = 371
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 3 ETDDALASLCEAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 58
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 59 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 107
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 108 RPLSWGFASMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 158
>gi|350593451|ref|XP_003133429.3| PREDICTED: Werner syndrome ATP-dependent helicase [Sus scrofa]
Length = 1443
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
VVG D EW P Y KG K+ +++++Q+ S+ ++F + ++ V L +L++
Sbjct: 78 VVGFDMEWPPVYNKG-KLGRIALIQLCVSESKCYLFHISSMS-----VFPQGLKMLLENE 131
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQN--VFKEPKGGLSGLAEKILGAGL 453
I K G + D +L + K + L D+ N + L+GL + + L
Sbjct: 132 AIKKAGVGIKGDQSKLLRDFDIK--LKSFVELTDVANEKLKCAETWSLNGLVKHLFSKQL 189
Query: 454 --NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
+K+ R SNW PL+++Q YAA DA I+ + +
Sbjct: 190 LKDKSIRCSNWSNFPLTEDQKLYAATDAYAGFIIYQKLEN 229
>gi|425440942|ref|ZP_18821233.1| 3'-5' exonuclease domain protein [Microcystis aeruginosa PCC 9717]
gi|389718511|emb|CCH97545.1| 3'-5' exonuclease domain protein [Microcystis aeruginosa PCC 9717]
Length = 305
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 28/233 (12%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASD---EMVFIFDLI 374
++ E D + AI H ++ +D E K +++ + I+ ++D E V I D++
Sbjct: 3 YLTESDAIRNAIDHFSHFPILWLDTEVADYNSKTPRLSLIQILADSTDLTGERVTILDVL 62
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQN-- 432
D PD+ + +T+I+ I K+ +N D K L G K L++
Sbjct: 63 ----DRPDLTNYFITKIMLVDRIEKVFHNASYDCKFL----GGKSKVKKITCTLELAKKV 114
Query: 433 ---VFKEPKGGLSGLAEKILG-AGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHH 488
+ P L +AE + ++K+ + NW +RPL+ QLEYA D V QI H
Sbjct: 115 PYYIAPLPNYQLKTVAECLCHFPAIDKSEQGGNWGKRPLTAAQLEYAQKDPVYTAQIHHR 174
Query: 489 VRSCSQ---PTDVSEGHDKIE---WKSY-----IVSHMDNPKKSKKRPTIKKE 530
+ S P E +++ W+ Y + + M++ K+ K I++E
Sbjct: 175 LLQLSHLITPDPAGENLERLTNRYWEIYQQWKILDTEMEHLKERLKSAIIQQE 227
>gi|121705450|ref|XP_001270988.1| exosome component 3'-5' exonuclease [Aspergillus clavatus NRRL 1]
gi|119399134|gb|EAW09562.1| exosome complex exonuclease Rrp6, putative [Aspergillus clavatus
NRRL 1]
Length = 778
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 15/177 (8%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK-L 376
+VD ++G+ + + ++ K + ID E ++ VS+MQI++ + ++ D +K
Sbjct: 232 FVDTLEGVKEMLSELKSAKEIAIDLE---HHDMHSYHGLVSLMQISTRDKDWVVDTLKPW 288
Query: 377 AEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYG--ELECFKHYEMLLDIQNVF 434
ED+ L + P ILK+ + DI L G + F Y
Sbjct: 289 REDL-----QILNDVFADPAILKVLHGSSMDIIWLQRDLGLYVVGMFDTYHAAC----AL 339
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
PK L L +K + +K + ++W RPL +YA D LL I+ H+R+
Sbjct: 340 NYPKRSLKFLLQKFVNFEADKRYQMADWRIRPLPSGMFDYARSDTHYLLYIYDHLRN 396
>gi|359407673|ref|ZP_09200148.1| ribonuclease D [SAR116 cluster alpha proteobacterium HIMB100]
gi|356677306|gb|EHI49652.1| ribonuclease D [SAR116 cluster alpha proteobacterium HIMB100]
Length = 387
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 319 VDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAE 378
+ + L A+ + G V +D E+ + K+ ++Q+ ++E D LAE
Sbjct: 8 ITSTEDLVSALADMAGADFVAVDTEF---MRETTYYPKLCLVQLCANEKTVCID--PLAE 62
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPK 438
+ D+ S L ++Q+P I+K+ + + D++ H G + Y+ + +
Sbjct: 63 GI-DL--SALYALMQNPNIVKVFHAGRQDLEIFVHLTGSVPQ-PVYDTQIAAMVCGLGDQ 118
Query: 439 GGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
G L + G ++K+ R +NW +RPL+ Q++YAA D + L +I+ +
Sbjct: 119 VGYDKLVQHYTGKSIDKSSRFTNWAERPLTDRQIKYAADDVIYLAEIYPRI 169
>gi|289628944|ref|ZP_06461898.1| ribonuclease D [Pseudomonas syringae pv. aesculi str. NCPPB 3681]
gi|289651074|ref|ZP_06482417.1| ribonuclease D [Pseudomonas syringae pv. aesculi str. 2250]
gi|422583224|ref|ZP_16658351.1| ribonuclease D [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|298159138|gb|EFI00196.1| Ribonuclease D [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|330868058|gb|EGH02767.1| ribonuclease D [Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 377
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI + ++ D
Sbjct: 4 DIHWIRDDDSLARHCAEWQLLPFVALDTE----FMRVDTFYPIAALLQIGDGQSAWLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + + P L+ +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LLINDWRP------LSALLENPDVIKVVHACSEDLEVLLRLTGSLPV-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++L L K S+W QRPLS+ Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLNIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAELFAILRP 170
>gi|422645745|ref|ZP_16708880.1| ribonuclease D [Pseudomonas syringae pv. maculicola str. ES4326]
gi|330959294|gb|EGH59554.1| ribonuclease D [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 377
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 83/178 (46%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + V +D E +++ ++ ++QI + ++ D
Sbjct: 4 DIHWIRDDDSLALHCAQWQSLPFVALDTE----FMRVDTFYPIAALLQIGDGKSAWLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + + P L+ +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LLINDWRP------LSALLENPAVIKVVHACSEDLEVLLRLTGSLPV-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++L L K S+W QRPLS+ Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLNIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAELFAILRP 170
>gi|321462442|gb|EFX73465.1| hypothetical protein DAPPUDRAFT_325261 [Daphnia pulex]
Length = 474
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 319 VDEVDGLHKAIC-HIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
V E D ++ + H ++G DCEW + V G V+++Q+AS + V +
Sbjct: 19 VSEWDDVYSVLLKHCSEVPILGFDCEW--SNVDG-NTQPVALIQLASHQGVCALVRVCCL 75
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQN-VFKE 436
+P+ L + IL +P ILK+G D +L G C + D+++ +F+
Sbjct: 76 STLPESLKN----ILTNPKILKVGVATWEDASKLKRDLGIQFCGGY-----DVRHLIFRH 126
Query: 437 PKG----GLSGLAEKILGAGLNK--TRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
PK SGL+ G LNK + R S+WE LS Q++YAA DA+ + I
Sbjct: 127 PKRVSLLSKSGLS----GTVLNKHFSVRCSDWEAENLSTIQVKYAAQDAIASIAI 177
>gi|125527138|gb|EAY75252.1| hypothetical protein OsI_03140 [Oryza sativa Indica Group]
Length = 357
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 333 EGCKVVGIDCEWKPNYVK-GCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRI 391
+G +VGID EW+ +++ G KV+++Q+ +F + + VP L
Sbjct: 189 QGGLIVGIDTEWRTDHLPDGKTCYKVAVLQLCVGRRCLVFQIYQAGNMVPHEL----AEF 244
Query: 392 LQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQ----NVFKEP---KGGLSGL 444
L P + +G D+++LA+ +C +D++ V +P + GL L
Sbjct: 245 LADPSVRFVGVAVNNDMQRLAN-----DCNLRVACAVDLRYAAAAVLGQPELARAGLKRL 299
Query: 445 AEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
A ++GA + K + S W + L+ Q+ YA +DA V +I + S
Sbjct: 300 ALTVMGAHMEKEKNITKSRWGEPTLTWEQVNYACIDAYVSYEIGRRLLS 348
>gi|425898087|ref|ZP_18874678.1| ribonuclease D [Pseudomonas chlororaphis subsp. aureofaciens 30-84]
gi|397891324|gb|EJL07802.1| ribonuclease D [Pseudomonas chlororaphis subsp. aureofaciens 30-84]
Length = 377
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 83/178 (46%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++Q+ + ++ D
Sbjct: 4 DIHWIRDNDSLGQFCTEWQKLPFVALDTE----FMRVDTFYPIAGLLQVGDGQRAYLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + + P L +L++ ++K+ + D++ L G L ++ L +
Sbjct: 60 LTIDDWQP------LAALLENSAVVKVVHACSEDLEVLLRLTGSLPT-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++LG L K S+W QRPLS+ Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLGIELPKGETRSDWLQRPLSETQVSYAAEDAVHLAEVFTRLRP 170
>gi|374980831|ref|ZP_09722161.1| Ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|378984379|ref|YP_005247534.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|386591647|ref|YP_006088047.1| Ribonuclease D [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|417341354|ref|ZP_12122437.1| Ribonuclease D [Salmonella enterica subsp. enterica serovar Baildon
str. R6-199]
gi|312912807|dbj|BAJ36781.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|321224451|gb|EFX49514.1| Ribonuclease D [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|357957994|gb|EHJ82796.1| Ribonuclease D [Salmonella enterica subsp. enterica serovar Baildon
str. R6-199]
gi|383798691|gb|AFH45773.1| Ribonuclease D [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
Length = 371
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 3 ETDDALASLCEAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 58
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 59 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 107
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 108 RPLSWGFASMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 158
>gi|422031030|ref|ZP_16377213.1| ribonuclease D, partial [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|414021434|gb|EKT04985.1| ribonuclease D, partial [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
Length = 382
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 14 ETDDALASLCEAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 69
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 70 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 118
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 119 RPLSWGFASMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 169
>gi|404401962|ref|ZP_10993546.1| ribonuclease D [Pseudomonas fuscovaginae UPB0736]
Length = 377
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI ++ D
Sbjct: 4 DIHWIRDNDSLGRHCTEWQQLPFVALDTE----FMRVDTFYPIAGLIQIGDGSSAYLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + P L +L +P ++K+ + D++ L G L ++ L +
Sbjct: 60 LTIDNWQP------LAALLDNPAVVKVVHACSEDLEVLLRLTGSLPT-PLFDTQLAAGYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++LG L K S+W QRPLS+ Q+ YAA DA+ L +++ +R
Sbjct: 113 NLGFSMGYSRLVQEVLGIDLPKGETRSDWLQRPLSETQVSYAAEDALHLAEVYSRLRP 170
>gi|373950624|ref|ZP_09610585.1| 3'-5' exonuclease [Shewanella baltica OS183]
gi|386323539|ref|YP_006019656.1| 3'-5' exonuclease [Shewanella baltica BA175]
gi|333817684|gb|AEG10350.1| 3'-5' exonuclease [Shewanella baltica BA175]
gi|373887224|gb|EHQ16116.1| 3'-5' exonuclease [Shewanella baltica OS183]
Length = 316
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 79/162 (48%), Gaps = 12/162 (7%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
+++ E D + + ++ +V+G D E + ++ +G + + +S++QIA+ + ++F
Sbjct: 114 EVVQPSEFDAV---VTRLQAEQVLGFDTETRASFERGVQ-HPLSLIQIATADACYLFQHA 169
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF 434
L E + L +L+ ILK+G + D + L +G + ++ + +
Sbjct: 170 ILGEQF-----TQLKTVLEDENILKVGVGLRSDAQALKRQWG-INVASKLDLNWALAQLG 223
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRN--SNWEQRPLSQNQLEY 474
E + G L +LG ++K ++ SNW+ PLS Q+ Y
Sbjct: 224 AEKEMGTRQLVATLLGTRIDKPKKITLSNWQHVPLSGAQINY 265
>gi|448519311|ref|XP_003868060.1| Rrp6 nuclear exosome exonuclease component [Candida orthopsilosis
Co 90-125]
gi|380352399|emb|CCG22625.1| Rrp6 nuclear exosome exonuclease component [Candida orthopsilosis]
Length = 814
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 22/181 (12%)
Query: 317 IWVDEVDGLHKAICHIEGCKVVGIDCE---WKPNYVKGCKMNKVSIMQIASDEMVFIFDL 373
IWVD VDGL++ I + + +D E ++ Y C +MQI++ E +I D
Sbjct: 273 IWVDTVDGLNEMIKELSQSSEIAVDLEHHDYRSYYGIVC------LMQISNREKDWIIDT 326
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ L D+ S L +I P I+K+ + DI L G + L D +
Sbjct: 327 LVLRGDL-----SALNKIFTDPKIIKVLHGAFMDIIWLQRDLG-----LYIVSLFDTYHA 376
Query: 434 FKE---PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
++ K L L + +K + ++W RPL + L YA D LL IF +R
Sbjct: 377 SRQLGFSKFSLQYLLDTFAHFRTSKKYQLADWRIRPLPKPMLAYARSDTHFLLYIFDQLR 436
Query: 491 S 491
+
Sbjct: 437 N 437
>gi|417415152|ref|ZP_12158892.1| Ribonuclease D [Salmonella enterica subsp. enterica serovar
Mississippi str. A4-633]
gi|353623523|gb|EHC72781.1| Ribonuclease D [Salmonella enterica subsp. enterica serovar
Mississippi str. A4-633]
Length = 371
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 3 ETDDALASLCEAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 58
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 59 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 107
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 108 RPLSWGFASMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 158
>gi|322417808|ref|YP_004197031.1| 3'-5' exonuclease [Geobacter sp. M18]
gi|320124195|gb|ADW11755.1| 3'-5' exonuclease [Geobacter sp. M18]
Length = 377
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 70/137 (51%), Gaps = 10/137 (7%)
Query: 356 KVSIMQIASDEMVFIFDLIKLAEDVP-DVLDSCLTRILQSPGILKLGYNFQCDIKQLAHS 414
KV ++Q++S+ + D + P DV L I +P I K+ + D++ L
Sbjct: 50 KVCLIQVSSESENRLIDPL-----APIDV--RVLAPIFANPAIKKIFHGADYDMRSLYRD 102
Query: 415 YGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEY 474
+G +E ++ ++ Q E + GL+ L +K G L+K + ++W +RP SQ LEY
Sbjct: 103 FG-IEVVNLFDTMIASQ-FLGESEFGLAALLKKRFGVELDKRYQKADWSKRPFSQEMLEY 160
Query: 475 AALDAVVLLQIFHHVRS 491
A D +L++++ + +
Sbjct: 161 AMKDTSLLIELYRQLEA 177
>gi|242767043|ref|XP_002341292.1| exosome component 3'-5' exonuclease [Talaromyces stipitatus ATCC
10500]
gi|218724488|gb|EED23905.1| exosome complex exonuclease Rrp6, putative [Talaromyces stipitatus
ATCC 10500]
Length = 771
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 87/199 (43%), Gaps = 15/199 (7%)
Query: 296 PEAGFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMN 355
P++ +V + + + +WVD +G+ + + ++ K + +D E ++
Sbjct: 208 PKSTYVVAPPVEFGPVETTQAVWVDTPEGVAEMVEELKKAKEIAVDLE---HHDVHTYYG 264
Query: 356 KVSIMQIASDEMVFIFDLIK-LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHS 414
VS+MQI++ + ++ D ++ ED+ L + P ILK+ + DI L
Sbjct: 265 LVSLMQISTRDKDWVVDTLQPWREDL-----QRLNEVFTDPNILKVFHGSTMDIVWLQRD 319
Query: 415 YG--ELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQL 472
G + F Y + PK L L EK +K + ++W RPL+ L
Sbjct: 320 LGLYVVSLFDTYHAAV----ALGFPKRSLKFLLEKYAHYEADKKYQMADWRLRPLTDEML 375
Query: 473 EYAALDAVVLLQIFHHVRS 491
+YA D LL I+ +R+
Sbjct: 376 KYARADTHYLLYIYDCLRN 394
>gi|300867748|ref|ZP_07112393.1| 3'-5' exonuclease (modular protein) [Oscillatoria sp. PCC 6506]
gi|300334331|emb|CBN57565.1| 3'-5' exonuclease (modular protein) [Oscillatoria sp. PCC 6506]
Length = 433
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 19/170 (11%)
Query: 329 ICHIEGCKVVGIDCEWKPNYVKGCKMNK-VSIMQIASD------EMVFIFDLIKLAEDVP 381
I K++ ID E V K N +S++Q+ +D F+ D+++ E
Sbjct: 14 IAKFSQAKILWIDTE-----VADYKFNPTLSLIQVLADANDLTGNASFLLDVLEQPELTV 68
Query: 382 DVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGE-LECFKHYEMLLDIQNVFKEPKGG 440
D +D +I+ +P I K+ +N DI+ L + + + C + V P
Sbjct: 69 DFID----KIMANPDIEKVMHNASYDIRFLGNDRAQNITCTLKLARKIPYY-VLPLPNHK 123
Query: 441 LSGLAEKILG-AGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L L E + G ++K + +W +RPL++ QLEYA +D V L ++ H+
Sbjct: 124 LKTLIEALCGIPNVDKAEQGGDWGKRPLTEKQLEYAKMDVVYLAEVHSHL 173
>gi|357130641|ref|XP_003566956.1| PREDICTED: Werner Syndrome-like exonuclease-like [Brachypodium
distachyon]
Length = 203
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 13/151 (8%)
Query: 339 GIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGIL 398
G+D EW+P+Y G N +++Q+ +F L+ A+ +P L L P
Sbjct: 51 GLDVEWRPSY--GRARNPAALLQLCVQNRCLVFQLLH-ADYIPQALADSLV----DPRWS 103
Query: 399 KLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEP---KGGLSGLAEKILGAGLNK 455
+G D +L + YG L+ ++ + P + GL LA + G + K
Sbjct: 104 FVGVGVDADAVRLGNDYG-LQVANTVDLRGLAAGQLRMPELRQAGLVRLAHAVTGVNIEK 162
Query: 456 TRR--NSNWEQRPLSQNQLEYAALDAVVLLQ 484
+R S W+ LS Q+ YA +DA+V Q
Sbjct: 163 PQRVRMSAWDAYRLSDEQIHYACIDALVSFQ 193
>gi|302346700|ref|YP_003814998.1| 3'-5' exonuclease [Prevotella melaninogenica ATCC 25845]
gi|302150614|gb|ADK96875.1| 3'-5' exonuclease [Prevotella melaninogenica ATCC 25845]
Length = 217
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 17/167 (10%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
KA+ ++ ++GID E +P + KG + KV+++Q E+ F+F L + VP+
Sbjct: 37 KAVNYLLSKDIIGIDTETRPVFKKG-QRRKVALLQACDHEVCFLFRLNLIG--VPE---- 89
Query: 387 CLTRILQSPGILKLGYNFQCDI----KQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLS 442
C+ R L+ + K+G + D+ ++L G + Y L I+++ L
Sbjct: 90 CIKRFLEDTTVPKVGLSLGDDMLMLHQRLDFKPGYFIDLQDYVKSLGIEDM------SLQ 143
Query: 443 GLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
L + + K + SNWE LS Q YA+ DA ++++ +
Sbjct: 144 KLYANVFHERITKREQLSNWENEILSDKQKIYASTDAWTCIKLYERL 190
>gi|340522865|gb|EGR53098.1| predicted protein [Trichoderma reesei QM6a]
Length = 451
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 337 VVGIDCEWKPNYVK--GCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQS 394
V+G D EW + G + N VS++QIAS + + + A++ D++ L +IL++
Sbjct: 59 VLGFDLEWMKYATRTDGPRQN-VSLIQIASPSRIALIHVALFAKEDGDLVAPSLRKILEN 117
Query: 395 PGILKLGYNFQCDIKQLAHSY-----GELECFKHYEMLLDIQNVFKEPKGGLSGLAEKI- 448
P + K+G N D +L + G E Y+++ + GL LA ++
Sbjct: 118 PNVSKVGVNIGGDCTRLKNYLGITVRGVFELSHLYKVVKYLPEKPSMVNKGLVSLATQVE 177
Query: 449 ------LGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
L GL R NW +R L+ Q+ Y+A DA LQ+++
Sbjct: 178 DHLLLPLYKGL--VVRTGNWMRR-LNPQQIHYSASDAYAGLQLYY 219
>gi|357601922|gb|EHJ63190.1| 3-5 exonuclease [Danaus plexippus]
Length = 382
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 17/156 (10%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
+ +G DCEW + ++++Q+++ + + L ++VP L +L+
Sbjct: 66 QAIGFDCEW---VTENGNRQPIALLQLSTFDGFCGLLRLNLLKEVP----MSLKELLEDK 118
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK---EPKGGLSGLAEKILGAG 452
I K+G D K L Y + + LD++++ + GGL+ LA LG
Sbjct: 119 NIYKVGVAPIDDAKYLIQDYS-----IYVKSTLDLRHIVELTGHTAGGLAALANTYLGIV 173
Query: 453 LNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIF 486
L+K R S+W L++ Q+ YAA DA V ++IF
Sbjct: 174 LDKNWRIRCSDWAAEELTERQIHYAATDAYVAIKIF 209
>gi|405979861|ref|ZP_11038202.1| hypothetical protein HMPREF9241_00925 [Actinomyces turicensis
ACS-279-V-Col4]
gi|404391236|gb|EJZ86300.1| hypothetical protein HMPREF9241_00925 [Actinomyces turicensis
ACS-279-V-Col4]
Length = 413
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 26/211 (12%)
Query: 319 VDEVDGLHKAICHIE-GCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEM-VFIFDLIKL 376
+D D L +A ++E G + +D E + G N ++QI +++ F+ D L
Sbjct: 31 IDTPDALDQARRNLEQGLTPIAVDVERAQGFRYG---NDPYLVQIRREDVGTFLIDTAAL 87
Query: 377 AEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE 436
PD+ S L + +L +++Q+ + L + LL ++
Sbjct: 88 ----PDL--SSLQAGVNDVWLLHDALQDLPNLRQVGLNPPSLFDTEVGARLLGLK----- 136
Query: 437 PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPT 496
K GL+ + E++LG GL K + SNW RPLS++ L YAALD +L +++ R Q
Sbjct: 137 -KFGLAAVCEQVLGLGLVKDHQASNWSVRPLSKDWLRYAALDVELLTELYR--RLSIQLN 193
Query: 497 DVSEGHDKIEWKSY---IVSHMDNPKKSKKR 524
D + EW ++H+D P + R
Sbjct: 194 DAG----RWEWMEEECDYLAHLDPPAPKRDR 220
>gi|418789121|ref|ZP_13344909.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19447]
gi|418794622|ref|ZP_13350340.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19449]
gi|418797045|ref|ZP_13352736.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19567]
gi|392760836|gb|EJA17667.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19449]
gi|392761081|gb|EJA17911.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19447]
gi|392770418|gb|EJA27146.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19567]
Length = 371
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 3 ETDDALASLCEAVRTCPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 58
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 59 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 107
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 108 RPLSWGFAAMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 158
>gi|150951537|ref|XP_001387875.2| exosome component 3'-5' exonuclease [Scheffersomyces stipitis CBS
6054]
gi|149388676|gb|EAZ63852.2| ribosomal RNA processing 3'-5' exonuclease [Scheffersomyces
stipitis CBS 6054]
Length = 792
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 22/180 (12%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCE---WKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
WVD V+ L K + ++ + +D E ++ Y C +MQI++ + +I D +
Sbjct: 235 WVDTVEELQKMVEELKKSSEIAVDLEHHDYRSYYGIVC------LMQISNRDQDWIIDTL 288
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF 434
L +D+ CL + +P I+K+ + DI L G + L D +
Sbjct: 289 ALRDDL-----ECLNTVFTNPHIVKVFHGAFMDIIWLQRDLG-----LYIVSLFDTYHAS 338
Query: 435 KE---PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
K PK L+ L E +K + ++W RPLS + YA D LL IF +++
Sbjct: 339 KSLGFPKFSLAYLLETFAHFKTSKKYQLADWRIRPLSPPMMAYARSDTHFLLSIFDQLKN 398
>gi|422609123|ref|ZP_16681077.1| ribonuclease D [Pseudomonas syringae pv. mori str. 301020]
gi|330894750|gb|EGH27411.1| ribonuclease D [Pseudomonas syringae pv. mori str. 301020]
Length = 377
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI + ++ D
Sbjct: 4 DIHWIRDDDSLARHCAEWQLLPFVALDTE----FMRVDTFYPIAALLQIGDGQNAWLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + + P L+ +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LLINDWQP------LSALLENPDVIKVVHACSEDLEVLLRLTGSLPV-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++L L K S+W QRPLS+ Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLNIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAELFAILRP 170
>gi|58697529|ref|ZP_00372780.1| ribonuclease D [Wolbachia endosymbiont of Drosophila simulans]
gi|58535998|gb|EAL59702.1| ribonuclease D [Wolbachia endosymbiont of Drosophila simulans]
Length = 284
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 32/165 (19%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
K + +D E+ N + K+S++QI+ E FI D + VP++ S + +I+ +
Sbjct: 22 KFIAVDTEFIRNNL--IYYPKLSLIQISYGEKSFIVDAL-----VPEIDLSFIKKIMLNQ 74
Query: 396 GILKLGYNFQCDIKQLAHSY------------GELECFKHYEMLLDIQNVFKEPKGGLSG 443
GI K+ ++ + DI+ L + + C +++ + G S
Sbjct: 75 GITKVFHSCRQDIESLLTVFKCIPTPIFDTQVAAMFCHYYHDFI------------GYSK 122
Query: 444 LAEKILGAGLNKTR-RNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
+ E+ G L+K + +NS+W +RPLS++QL+YA D V L ++
Sbjct: 123 VVEQYQGIALDKIKAKNSDWLRRPLSEDQLDYAVNDVVHLYDLYQ 167
>gi|428304463|ref|YP_007141288.1| 3'-5' exonuclease [Crinalium epipsammum PCC 9333]
gi|428245998|gb|AFZ11778.1| 3'-5' exonuclease [Crinalium epipsammum PCC 9333]
Length = 307
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 102/224 (45%), Gaps = 24/224 (10%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASD---EMVFIFDLI 374
++ E + I ++ +D E Y K +++ + ++ D + +IFD++
Sbjct: 3 YLTEATEIKALIDKFTRSSILWLDTEVADYYTKKPRLSLIQVLDDPEDLTGDKTYIFDVL 62
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGE-LECFKHYEMLLDIQN- 432
+ P++ +T+I+Q+ I K+ +N D++ L + + C +M I
Sbjct: 63 ----NQPELGAYFITQIMQNTDIEKVFHNASYDLRFLGKEQAKNVTC--TLQMAKKIPYY 116
Query: 433 VFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS- 491
+ P L L ++ L+K+ + SNW +RPL+ QL+Y +D V + QI ++
Sbjct: 117 ILPLPNYQLKTLVTELCDINLDKSEQGSNWGRRPLTAKQLQYVKMDTVYVAQIHSRLQDL 176
Query: 492 ---CSQPTDVSE------GHDKIE--WKSYIVSHMDNPKKSKKR 524
C P + + + +IE WK I S M++ ++ K+
Sbjct: 177 MTRCYPPIETEDLEALAVRYQQIEHQWKQ-ITSQMEHIQERVKK 219
>gi|409078186|gb|EKM78550.1| hypothetical protein AGABI1DRAFT_92822 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1353
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 74/171 (43%), Gaps = 27/171 (15%)
Query: 334 GCKVVGIDCEWK-----PNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCL 388
G +VG D EW +V+ K +I+QIA + +++ + ++ L L
Sbjct: 576 GEIIVGFDMEWNVELSPQGFVRSS--GKAAIIQIAYKKRIYVLQISEILSS--HKLPHQL 631
Query: 389 TRILQSPGILKLGYNFQCDIKQLAHSYGELECFK---HYEMLLDIQNVFKE-------PK 438
L P I K+G D+ L S C K + LDI + K+
Sbjct: 632 ELFLSHPRIRKVGRLVAGDLSNLQKS-----CNKPTGSFAGALDIAKIAKDRYAISNIAN 686
Query: 439 GGLSGLAEKILGAGLNKT---RRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
GL+ L+ +LG LNK R + WE R LS Q+ YAALDA L I+
Sbjct: 687 TGLADLSAIVLGKRLNKNTPLRTSQAWENRVLSDEQISYAALDAYASLLIY 737
>gi|125571460|gb|EAZ12975.1| hypothetical protein OsJ_02895 [Oryza sativa Japonica Group]
Length = 357
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 333 EGCKVVGIDCEWKPNYVKGCKM-NKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRI 391
+G +VGID EW+ +++ K KV+++Q+ +F + + VP L
Sbjct: 189 QGGLIVGIDTEWRTDHLPNGKTCYKVAVLQLCVGRRCLLFQIYQAGNMVPHEL----AEF 244
Query: 392 LQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQ----NVFKEP---KGGLSGL 444
L P + +G D+++LA+ +C +D++ V +P + GL L
Sbjct: 245 LADPSVRFVGVAVNNDMQRLAN-----DCNLRVACAVDLRYAAAAVLGQPELARAGLKRL 299
Query: 445 AEKILGAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
A ++GA + K + S W + L+ Q+ YA +DA V +I + S
Sbjct: 300 ALTVMGAHMEKEKNITKSRWGEPTLTWEQVNYACIDAYVSYEIGRRLLS 348
>gi|427707780|ref|YP_007050157.1| cell division protein FtsK [Nostoc sp. PCC 7107]
gi|427360285|gb|AFY43007.1| cell division FtsK/SpoIIIE [Nostoc sp. PCC 7107]
Length = 880
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 20/192 (10%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEM---VFIFDLI 374
++ E + + I + K + +D E Y K++ + ++ +D +I D++
Sbjct: 3 YLTESAAIQEVIFQLTNYKTLWVDTEIAHWYTSEPKLSLIQVLADPTDSTGASAYILDVL 62
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLA-HSYGELECFKHYEMLLDIQNV 433
D D+ + +I+ + I K+ +N DIK L H + C + ++ +
Sbjct: 63 ----DKHDLAADFINQIMFNHHIEKVFHNASFDIKYLGKHLAKNVTCTLQMARKITLKRL 118
Query: 434 FKEPKGGLSGLAEKILGAGL------NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
S L K L A L + T ++S+W +RPLS+ QLEYAA+D V L +
Sbjct: 119 ------QTSNLKLKTLAAELCNFSNVDITEQSSDWGKRPLSKKQLEYAAMDTVYLAAVHR 172
Query: 488 HVRSCSQPTDVS 499
+ S P D++
Sbjct: 173 QLIKISHPKDLT 184
>gi|99034557|ref|ZP_01314528.1| hypothetical protein Wendoof_01000660 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 409
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 32/165 (19%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
K + +D E+ N + K+S++QI+ E FI D + VP++ S + +I+ +
Sbjct: 39 KFIAVDTEFIRNNL--IYYPKLSLIQISYGEKSFIVDTL-----VPEIDLSFIKKIMLNQ 91
Query: 396 GILKLGYNFQCDIKQLAHSY------------GELECFKHYEMLLDIQNVFKEPKGGLSG 443
GI K+ ++ + DI+ L + + C +++ + G S
Sbjct: 92 GITKVFHSCRQDIESLLTVFKCIPTPIFDTQVAAMFCHYYHDFI------------GYSK 139
Query: 444 LAEKILGAGLNKTR-RNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
+ E+ G L+K + +NS+W +RPLS++QL+YA D V L ++
Sbjct: 140 VVEQYQGIALDKIKAKNSDWLRRPLSEDQLDYAVNDVVHLYDLYQ 184
>gi|444314737|ref|XP_004178026.1| hypothetical protein TBLA_0A07170 [Tetrapisispora blattae CBS 6284]
gi|387511065|emb|CCH58507.1| hypothetical protein TBLA_0A07170 [Tetrapisispora blattae CBS 6284]
Length = 771
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 28/185 (15%)
Query: 317 IWVDEVDGLHKAICHIEGCKVVGIDCE---WKPNYVKGCKMNKVSIMQIASDEMVFIFDL 373
IW+D + L + + + +D E + Y C +MQI++ E +I D
Sbjct: 239 IWIDTKESLADLLMDLRKQSEIAVDLEHHDLRSYYGITC------LMQISTREQDYIVDT 292
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
I L +D+ L I +P I K+ + DI L G ++ + +
Sbjct: 293 ISLRDDL-----IVLNEIFTNPNITKVFHGASMDIIWLQRDLGL--------YIVSLFDT 339
Query: 434 FKEPKG------GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
F K L+ L E +K + ++W +RPL+ N L YA D LL IF
Sbjct: 340 FHASKALGLARHSLAYLLENYASFKTSKKYQLADWRRRPLTNNMLAYARSDTHFLLNIFD 399
Query: 488 HVRSC 492
+R+
Sbjct: 400 QLRNT 404
>gi|337755515|ref|YP_004648026.1| ribonuclease D [Francisella sp. TX077308]
gi|336447120|gb|AEI36426.1| Ribonuclease D [Francisella sp. TX077308]
Length = 364
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 319 VDEVDGLHKAICHIEGCKVVGIDCE--WKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKL 376
+D L + ++ K + +D E W Y ++ ++QIA++ +F+ D ++
Sbjct: 3 IDTNKKLEDVVKALKNAKEIAVDTEFYWMRTYYP-----ELCLVQIATENEIFLIDTLE- 56
Query: 377 AEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE 436
D+ S L I + I K+ ++ DI + + + E ++ L + +
Sbjct: 57 -----DLDFSKLKDIFEDTNIQKIIHSATNDIP-IIKRFFDCEVNNIFDTQLAASFLGTQ 110
Query: 437 PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPT 496
+ L L + IL + K + S+W +RPLSQ Q +YA D L++I +H+ S T
Sbjct: 111 SQISLKALLKDILDIEMEKESQFSDWRKRPLSQKQFDYALKDVEHLIEIKYHLESKLNQT 170
Query: 497 D 497
D
Sbjct: 171 D 171
>gi|356566628|ref|XP_003551532.1| PREDICTED: Werner Syndrome-like exonuclease-like [Glycine max]
Length = 211
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 20/154 (12%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
+VG+ +W+PN + N V+ + + D IF ++ A VP L S L SP
Sbjct: 57 IVGLIAQWRPNTLPNMN-NPVATLHLCVDHRCLIFQILH-APSVPRALIS----FLASPN 110
Query: 397 ILKLGYNFQCDIKQLAHSYG-------ELECFKHYEMLLDIQNVFKEPKGGLSGLAEKIL 449
+ +G + +L Y +L E+ NV + GL L L
Sbjct: 111 VTFVGVGIHGHVDKLFQDYNLRVANVRDLRSLAAEEL-----NVPELYWAGLDTLGLCTL 165
Query: 450 GAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVV 481
G ++ R S W+ R L++ Q+EYAA+DA V
Sbjct: 166 GFEVSTPRYITTSRWDNRSLTEEQVEYAAVDAFV 199
>gi|410089289|ref|ZP_11285915.1| ribonuclease D [Pseudomonas viridiflava UASWS0038]
gi|409763576|gb|EKN48536.1| ribonuclease D [Pseudomonas viridiflava UASWS0038]
Length = 377
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + V +D E +++ ++ ++QI ++ D
Sbjct: 4 DIHWIRDDDSLALHCAQWQTLPFVALDTE----FMRVDTFYPIAALLQIGDGSRAWLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + + P L+ +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LLINDWTP------LSALLENPDVIKVVHACSEDLEVLLRLTGSLPV-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++L L K S+W QRPLS+ Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLNIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAELFTILRP 170
>gi|42520085|ref|NP_966000.1| ribonuclease D [Wolbachia endosymbiont of Drosophila melanogaster]
gi|42409822|gb|AAS13934.1| ribonuclease D, putative [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 392
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 20/159 (12%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
K + +D E+ N + K+S++QI+ E FI D + VP++ S + +I+ +
Sbjct: 22 KFIAVDTEFIRNNL--IYYPKLSLIQISYGEKSFIVDAL-----VPEIDLSFIKKIMLNQ 74
Query: 396 GILKLGYNFQCDIKQLAHSYGELECFKHYEM-LLDIQNV-----FKEPKGGLSGLAEKIL 449
GI K+ ++ + DI+ L L FK + D Q + G S + E+
Sbjct: 75 GITKVFHSCRQDIESL------LTVFKCIPTPIFDTQVAAMFCHYYHDFIGYSKVVEQYQ 128
Query: 450 GAGLNKTR-RNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
G L+K + +NS+W +RPLS++QL+YA D V L ++
Sbjct: 129 GIALDKIKAKNSDWLRRPLSEDQLDYAVNDVVHLYDLYQ 167
>gi|260592844|ref|ZP_05858302.1| 3'-5' exonuclease domain protein [Prevotella veroralis F0319]
gi|260535214|gb|EEX17831.1| 3'-5' exonuclease domain protein [Prevotella veroralis F0319]
Length = 220
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 15/174 (8%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
KA+ ++ ++G+D E +P + KG + KV+++Q E+ F+F L + PD
Sbjct: 37 KAVDYLLSRDIIGVDTETRPVFKKGHR-RKVALLQACDHEVCFLFRLNYIG--FPD---- 89
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE---PKGGLSG 443
C+ R L+ + K+G + D+ L FK +D+Q+ K L
Sbjct: 90 CIKRFLEDTTVPKVGLSLSDDMLMLHQRAN----FKP-GYFIDLQDYVKSLGIEDMSLQK 144
Query: 444 LAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
L + + K ++ SNWE L+ Q YA+ DA ++++ + + D
Sbjct: 145 LYANVFHERITKRQQLSNWENEVLNDKQKLYASTDAWTCIKLYERLHEMKETGD 198
>gi|58698273|ref|ZP_00373191.1| ribonuclease D [Wolbachia endosymbiont of Drosophila ananassae]
gi|225630014|ref|YP_002726805.1| Ribonuclease D [Wolbachia sp. wRi]
gi|225677056|ref|ZP_03788062.1| Ribonuclease D [Wolbachia endosymbiont of Muscidifurax uniraptor]
gi|58535197|gb|EAL59278.1| ribonuclease D [Wolbachia endosymbiont of Drosophila ananassae]
gi|225590902|gb|EEH12123.1| Ribonuclease D [Wolbachia endosymbiont of Muscidifurax uniraptor]
gi|225591995|gb|ACN95014.1| Ribonuclease D [Wolbachia sp. wRi]
Length = 392
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 32/165 (19%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
K + +D E+ N + K+S++QI+ E FI D + VP++ S + +I+ +
Sbjct: 22 KFIAVDTEFIRNNL--IYYPKLSLIQISYGEKSFIVDAL-----VPEIDLSFIKKIMLNQ 74
Query: 396 GILKLGYNFQCDIKQLAHSY------------GELECFKHYEMLLDIQNVFKEPKGGLSG 443
GI K+ ++ + DI+ L + + C +++ + G S
Sbjct: 75 GITKVFHSCRQDIESLLTVFKCIPTPIFDTQVAAMFCHYYHDFI------------GYSK 122
Query: 444 LAEKILGAGLNKTR-RNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
+ E+ G L+K + +NS+W +RPLS++QL+YA D V L ++
Sbjct: 123 VVEQYQGIALDKIKAKNSDWLRRPLSEDQLDYAVNDVVHLYDLYQ 167
>gi|302833517|ref|XP_002948322.1| hypothetical protein VOLCADRAFT_58009 [Volvox carteri f.
nagariensis]
gi|300266542|gb|EFJ50729.1| hypothetical protein VOLCADRAFT_58009 [Volvox carteri f.
nagariensis]
Length = 191
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 9/174 (5%)
Query: 317 IWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKL 376
+WVD + L + +E + + +D E ++ +MQI++ ++ D + L
Sbjct: 1 VWVDGEEALAGMVSELEAAEELAVDLE---HHSHRSFQGFTCLMQISTRTTDYVVDTLAL 57
Query: 377 AEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE 436
L L R+ P ++K+ + D+ L + L ++ V
Sbjct: 58 RNQ----LGPALARVFADPRVVKVFHGADSDVDWLQRDF-SLFLVNMFDTG-QAARVLGL 111
Query: 437 PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
P GL+ L E I G +K + ++W RPLS L YA D LL ++ +R
Sbjct: 112 PSFGLAYLLESICGVQADKRYQMADWRVRPLSPPMLHYARCDTHYLLYVYDKLR 165
>gi|389740502|gb|EIM81693.1| hypothetical protein STEHIDRAFT_171972 [Stereum hirsutum FP-91666
SS1]
Length = 910
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 78/189 (41%), Gaps = 20/189 (10%)
Query: 309 KELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMV 368
K WV + + + + +D E+ G V +MQI+S E
Sbjct: 233 KSFAETPFTWVSTSIDFATMLDKLRNAQEIAVDLEYHSYRTFG---GFVCLMQISSREED 289
Query: 369 FIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGE-----LECFKH 423
+I D +L +++ D L + P I+K+ + + D+ L + + F H
Sbjct: 290 WIVDPFELRDEMED-----LNEVFTDPKIVKIFHGAESDVAWLQQDFNLYIVNLFDTF-H 343
Query: 424 YEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLL 483
+LD P+ GL+ L E +K + ++W RPL Q LEYA D LL
Sbjct: 344 ASKVLDF------PRHGLASLLEMYCDFTADKRYQLADWRVRPLPQEMLEYARSDTHFLL 397
Query: 484 QIFHHVRSC 492
I+ ++R+
Sbjct: 398 YIYDNLRNA 406
>gi|17229189|ref|NP_485737.1| hypothetical protein all1697 [Nostoc sp. PCC 7120]
gi|17135517|dbj|BAB78063.1| all1697 [Nostoc sp. PCC 7120]
Length = 302
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 23/147 (15%)
Query: 356 KVSIMQIASD------EMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIK 409
++S++Q+ D + V++ D++ D PD++ + +I+ + I K+ +N D+K
Sbjct: 38 RLSLIQVLDDPNDMSGDRVYLLDVL----DQPDLVADFVDKIMVNTNIEKVFHNANFDVK 93
Query: 410 QLAHSYGE-----LECFKHYEM-LLDIQNVFKEPKGGLSGLAEKILG-AGLNKTRRNSNW 462
L + LE K LL +QN L LA+ + ++K + SNW
Sbjct: 94 LLGNKQARNITCTLEIAKKIPYYLLPVQNY------QLQSLAKLLCNFNNIDKQEQGSNW 147
Query: 463 EQRPLSQNQLEYAALDAVVLLQIFHHV 489
QRPLS+ Q+EYA LD + L QI +
Sbjct: 148 GQRPLSEEQIEYAYLDCIYLAQIHRRL 174
>gi|75906891|ref|YP_321187.1| 3'-5' exonuclease [Anabaena variabilis ATCC 29413]
gi|75700616|gb|ABA20292.1| 3'-5' exonuclease [Anabaena variabilis ATCC 29413]
Length = 302
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 75/147 (51%), Gaps = 23/147 (15%)
Query: 356 KVSIMQIASD------EMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIK 409
++S++Q+ D + V++ D++ D PD++ + + +I+ S I K+ +N D+K
Sbjct: 38 RLSLIQVLDDPDDMSGDRVYLLDVL----DQPDLVANFVEKIMVSTNIEKVFHNASFDVK 93
Query: 410 QLAHSYGE-----LECFKHYEM-LLDIQNVFKEPKGGLSGLAEKILG-AGLNKTRRNSNW 462
L + + LE K LL +QN L LA + ++K ++SNW
Sbjct: 94 LLGNKQAKNITCTLEIAKKIPYHLLPVQNY------QLQSLATLLCNFNNIDKQEQSSNW 147
Query: 463 EQRPLSQNQLEYAALDAVVLLQIFHHV 489
+RPLS+ Q+EYA LD + L QI +
Sbjct: 148 GRRPLSEEQIEYAYLDCIYLAQIHRRL 174
>gi|68490644|ref|XP_710869.1| likely nuclear exosome component Rrp6p [Candida albicans SC5314]
gi|46432124|gb|EAK91626.1| likely nuclear exosome component Rrp6p [Candida albicans SC5314]
Length = 786
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 16/199 (8%)
Query: 296 PEAGFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCE---WKPNYVKGC 352
P+A S + K+ IWVD V+ L K + ++ + +D E ++ Y C
Sbjct: 212 PDAILAKSDAIPPKDWSTTKAIWVDTVEELQKMVQELKKSTEIAVDLEHHDYRSYYGIVC 271
Query: 353 KMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLA 412
+MQI++ E +I D + L +D+ + L + P I+K+ + DI L
Sbjct: 272 ------LMQISNREQDWIIDTLALRDDL-----TVLNEVFADPDIVKVFHGAFMDIIWLQ 320
Query: 413 HSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQL 472
G L ++ P+ L+ L E +K + ++W RPLS L
Sbjct: 321 RDLG-LYVVSLFDTF-HASRALGFPRFSLAYLLEVYAHFKTSKQYQLADWRIRPLSPPML 378
Query: 473 EYAALDAVVLLQIFHHVRS 491
YA D LL I+ +++
Sbjct: 379 AYARSDTHFLLFIYDQLKN 397
>gi|354544046|emb|CCE40768.1| hypothetical protein CPAR2_108030 [Candida parapsilosis]
Length = 771
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 22/181 (12%)
Query: 317 IWVDEVDGLHKAICHIEGCKVVGIDCE---WKPNYVKGCKMNKVSIMQIASDEMVFIFDL 373
IWVD +GL+K I ++ + +D E ++ Y C +MQI++ E +I D
Sbjct: 229 IWVDTTEGLNKMIDELQQSTEIAVDLEHHDYRSYYGIVC------LMQISNREKDWIIDT 282
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ L +D+ S L ++ P I+K+ + DI L G + L D +
Sbjct: 283 LVLRDDL-----SVLNKVFTDPKIIKVLHGAFMDIIWLQRDLG-----LYIVSLFDTYHA 332
Query: 434 FKE---PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
++ K L L + +K + ++W RPL + L YA D LL IF +R
Sbjct: 333 SRQLGFSKFSLQYLLDTFAHFRTSKKYQLADWRIRPLPKPMLAYARSDTHFLLYIFDQLR 392
Query: 491 S 491
+
Sbjct: 393 N 393
>gi|375131511|ref|YP_004993611.1| ribonuclease D [Vibrio furnissii NCTC 11218]
gi|315180685|gb|ADT87599.1| ribonuclease D [Vibrio furnissii NCTC 11218]
Length = 371
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 78/174 (44%), Gaps = 16/174 (9%)
Query: 319 VDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKM-NKVSIMQIASDEMVFIFDLIKLA 377
+D+++ L + VV +D E +V+ ++ ++Q+ E + + D + +
Sbjct: 6 IDQLNDLERVCSLARDADVVMLDTE----FVRTRTFYPQLGLIQLFDGENLSLIDPLAMD 61
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF--K 435
E P V +LQ +LK+ + DI+ S+G C + I F
Sbjct: 62 EMTPFV------ELLQDTSVLKVLHACGEDIEVFKTSFG---CVPFPMVDTQIMAAFLGY 112
Query: 436 EPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
G + LA +L L+K+ ++W RPLSQ QLEYAA D L+ ++ +
Sbjct: 113 GLSTGFAALAHDLLNVELDKSESRTDWLARPLSQKQLEYAAADVFYLMPMYEQL 166
>gi|302674116|ref|XP_003026743.1| hypothetical protein SCHCODRAFT_238450 [Schizophyllum commune H4-8]
gi|300100427|gb|EFI91840.1| hypothetical protein SCHCODRAFT_238450 [Schizophyllum commune H4-8]
Length = 297
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 73/141 (51%), Gaps = 15/141 (10%)
Query: 357 VSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCD----IKQLA 412
+ ++ IA D +V FDL+ LA VP + L +L+ P I+K+G + D ++ A
Sbjct: 84 IRLLTIARDGVVIAFDLLVLA-GVP----ARLIEMLRDPNIIKVGVELKGDSILLLRHFA 138
Query: 413 ---HSYGEL-ECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLS 468
H+ E+ + +K +++ + L +A +LG ++K ++ S+W LS
Sbjct: 139 VPVHNGWEISQLWKSMHPSIEVAPLTTHIS--LDDMARIVLGVKVDKLQQTSDWSAPALS 196
Query: 469 QNQLEYAALDAVVLLQIFHHV 489
Q+EY+ LDA +L+ I H V
Sbjct: 197 VEQIEYSYLDAYILVPIMHVV 217
>gi|260768989|ref|ZP_05877923.1| ribonuclease D [Vibrio furnissii CIP 102972]
gi|260617019|gb|EEX42204.1| ribonuclease D [Vibrio furnissii CIP 102972]
Length = 397
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 78/174 (44%), Gaps = 16/174 (9%)
Query: 319 VDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKM-NKVSIMQIASDEMVFIFDLIKLA 377
+D+++ L + VV +D E +V+ ++ ++Q+ E + + D + +
Sbjct: 32 IDQLNDLERVCSLARDADVVMLDTE----FVRTRTFYPQLGLIQLFDGENLSLIDPLAMD 87
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF--K 435
E P V +LQ +LK+ + DI+ S+G C + I F
Sbjct: 88 EMTPFV------ELLQDTSVLKVLHACGEDIEVFKTSFG---CVPFPMVDTQIMAAFLGY 138
Query: 436 EPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
G + LA +L L+K+ ++W RPLSQ QLEYAA D L+ ++ +
Sbjct: 139 GLSTGFAALAHDLLNVELDKSESRTDWLARPLSQKQLEYAAADVFYLMPMYEQL 192
>gi|68490669|ref|XP_710857.1| likely nuclear exosome component Rrp6p [Candida albicans SC5314]
gi|46432110|gb|EAK91613.1| likely nuclear exosome component Rrp6p [Candida albicans SC5314]
Length = 785
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 20/201 (9%)
Query: 296 PEAGFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCE---WKPNYVKGC 352
P+A S + K+ IWVD V+ L K + ++ + +D E ++ Y C
Sbjct: 212 PDAILAKSDAIPPKDWSTTKAIWVDTVEELQKMVQELKKSTEIAVDLEHHDYRSYYGIVC 271
Query: 353 KMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLA 412
+MQI++ E +I D + L +D+ + L + P I+K+ + DI L
Sbjct: 272 ------LMQISNREQDWIIDTLALRDDL-----TVLNEVFADPDIVKVFHGAFMDIIWLQ 320
Query: 413 HSYG--ELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQN 470
G + F + P+ L+ L E +K + ++W RPLS
Sbjct: 321 RDLGLYVVSLFDTFHA----SRALGFPRFSLAYLLEVYAHFKTSKQYQLADWRIRPLSPP 376
Query: 471 QLEYAALDAVVLLQIFHHVRS 491
L YA D LL I+ +++
Sbjct: 377 MLAYARSDTHFLLFIYDQLKN 397
>gi|56413264|ref|YP_150339.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|197362190|ref|YP_002141827.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|56127521|gb|AAV77027.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|197093667|emb|CAR59137.1| ribonuclease D [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
Length = 371
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 3 ETDDALASLCEAVRTCPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 58
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 59 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 107
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 108 RPLSWGFASMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 158
>gi|336452077|ref|ZP_08622510.1| ribonuclease D [Idiomarina sp. A28L]
gi|336281124|gb|EGN74408.1| ribonuclease D [Idiomarina sp. A28L]
Length = 379
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 404 FQCDIKQLAHSYGE-LECFKHY----EMLLDIQ--NVF--KEPKGGLSGLAEKILGAGLN 454
+ DI + H+ GE LE F+ L D Q N F + G +GL E++L ++
Sbjct: 72 LRSDIITVLHAAGEDLEIFQRNNAAPRFLFDTQIANAFISDGTQIGYAGLVEQMLNVSVD 131
Query: 455 KTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
K++ ++W QRPLS QLEYAA D L +++ +R+
Sbjct: 132 KSQSRTDWLQRPLSPAQLEYAAADVEYLAELYPTLRA 168
>gi|388543349|ref|ZP_10146640.1| ribonuclease D [Pseudomonas sp. M47T1]
gi|388278661|gb|EIK98232.1| ribonuclease D [Pseudomonas sp. M47T1]
Length = 377
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
+I W+ + + L + + V +D E +++ ++ ++QI ++ D
Sbjct: 4 EIHWIRDDESLARHCAEWQRLPYVALDTE----FMRVDTFYPIAGLIQIGDGACAWLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + + P L R+L+ PG++K+ + D++ L G L ++ L +
Sbjct: 60 LSIKQWQP------LARLLEDPGVIKVVHACSEDLEVLVRLTGSLPA-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L + +L L K S+W QRPLS Q+ YAA DAV L +++ +R
Sbjct: 113 NLGFSMGYSRLVQAVLDIELPKGETRSDWLQRPLSDTQISYAAEDAVHLAEVYEKLRP 170
>gi|440741870|ref|ZP_20921202.1| ribonuclease D [Pseudomonas syringae BRIP39023]
gi|440378394|gb|ELQ15016.1| ribonuclease D [Pseudomonas syringae BRIP39023]
Length = 377
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI + ++ D
Sbjct: 4 DIHWIRDDDSLARHCAQWQSLPFVALDTE----FMRVDTFYPIAALLQIGDGQSAWLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ L D L+ +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 L-LINDW-----RLLSALLENPDVIKVVHACSEDLEVLLRLTGSLPV-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++L L K S+W QRPLS+ Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLDIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAELFTILRP 170
>gi|161503057|ref|YP_001570169.1| ribonuclease D [Salmonella enterica subsp. arizonae serovar
62:z4,z23:- str. RSK2980]
gi|160864404|gb|ABX21027.1| hypothetical protein SARI_01122 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 371
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + + +
Sbjct: 3 ETDDALASLCEAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGADVALIDPLGITD 58
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P L +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 59 WSP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 107
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 108 RPLSWGFASMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 158
>gi|125571950|gb|EAZ13465.1| hypothetical protein OsJ_03382 [Oryza sativa Japonica Group]
Length = 287
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 19/175 (10%)
Query: 318 WVDEVDGLH-KAICHIEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIK 375
W+DE+ +H + + H+ +VG+D EW P G C + V+++QI +F +I
Sbjct: 116 WLDEIVRIHHRRLDHL----IVGLDVEWNP--ASGFCALGPVAVLQICVGRRCLVFQIIH 169
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK 435
A+ VPD L L +G D+ +L Y +LE ++
Sbjct: 170 -ADYVPDQLGD----FLGDGRFTFVGVGIHDDVDKLREHY-DLEVENAVDLRYLAAQTIG 223
Query: 436 EP---KGGLSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+P GL GL +++ + K R S W+ R L+ +Q+ YA DA ++
Sbjct: 224 KPALRSTGLQGLVWEVMDVWMEKPHHVRVSAWDSRQLTLDQVMYACADAFASFEV 278
>gi|348689758|gb|EGZ29572.1| hypothetical protein PHYSODRAFT_472255 [Phytophthora sojae]
Length = 181
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 48/78 (61%), Gaps = 7/78 (8%)
Query: 336 KVVGIDCEWKPNY--VKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQ 393
KVVG+D E +P++ +KG K N V ++Q+++ + FI+ L + + +P VL +
Sbjct: 49 KVVGVDTEARPDFQPLKGKKGNPVCLIQVSTLDRAFIYRLQR-GKPLPPVLQE----LFA 103
Query: 394 SPGILKLGYNFQCDIKQL 411
PG+LK+G++ D +QL
Sbjct: 104 DPGVLKVGHSLSDDFRQL 121
>gi|410081706|ref|XP_003958432.1| hypothetical protein KAFR_0G02660 [Kazachstania africana CBS 2517]
gi|372465020|emb|CCF59297.1| hypothetical protein KAFR_0G02660 [Kazachstania africana CBS 2517]
Length = 735
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 76/178 (42%), Gaps = 16/178 (8%)
Query: 317 IWVDEVDGLHKAICHIEGCKVVGIDCE---WKPNYVKGCKMNKVSIMQIASDEMVFIFDL 373
+WVD V+ L+ + I+ + ID E ++ Y C +MQI++ E ++ D
Sbjct: 214 VWVDNVESLNHMLNDIKKYTEIAIDLEHHDYRTYYGIVC------LMQISTRETDYLVDT 267
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
I L D+ L + P ++K+ + DI L G L ++
Sbjct: 268 IALRNDL-----KVLNEVFTDPSVVKVLHGAFMDIIWLQRDLG-LYIVSLFDTF-HASRA 320
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
P+ L+ L E+ +K + ++W RPLS+ YA D LL I+ +R+
Sbjct: 321 LGFPRHSLAYLLEEFANFKTSKKYQLADWRVRPLSKAMTAYARADTHFLLNIYDQLRN 378
>gi|422591877|ref|ZP_16666513.1| ribonuclease D [Pseudomonas syringae pv. morsprunorum str. M302280]
gi|330879592|gb|EGH13741.1| ribonuclease D [Pseudomonas syringae pv. morsprunorum str. M302280]
Length = 377
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 82/177 (46%), Gaps = 12/177 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI + ++ +
Sbjct: 4 DIHWIRDDDSLARHCAQWQSLPFVALDTE----FMRVDTFYPIAALLQIGDGQSAWLIEP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + P L+ +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LLINNWAP------LSALLENPDVIKVVHACSEDLEVLLRLTGSLPV-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
G S L +++L L K S+W QRPLS Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLNIDLPKGETRSDWLQRPLSDTQISYAAEDAVHLAELFAILR 169
>gi|57900570|dbj|BAD87022.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 327
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 19/175 (10%)
Query: 318 WVDEVDGLH-KAICHIEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIK 375
W+DE+ +H + + H+ +VG+D EW P G C + V+++QI +F +I
Sbjct: 156 WLDEIVRIHHRRLDHL----IVGLDVEWNP--ASGFCALGPVAVLQICVGRRCLVFQIIH 209
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK 435
A+ VPD L L +G D+ +L Y +LE ++
Sbjct: 210 -ADYVPDQLGD----FLGDGRFTFVGVGIHDDVDKLREHY-DLEVENAVDLRYLAAQTIG 263
Query: 436 EP---KGGLSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+P GL GL +++ + K R S W+ R L+ +Q+ YA DA ++
Sbjct: 264 KPALRSTGLQGLVWEVMDVWMEKPHHVRVSAWDSRQLTLDQVMYACADAFASFEV 318
>gi|366995964|ref|XP_003677745.1| hypothetical protein NCAS_0H00860 [Naumovozyma castellii CBS 4309]
gi|342303615|emb|CCC71396.1| hypothetical protein NCAS_0H00860 [Naumovozyma castellii CBS 4309]
Length = 755
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 16/179 (8%)
Query: 317 IWVDEVDGLHKAICHIEGCKVVGIDCE---WKPNYVKGCKMNKVSIMQIASDEMVFIFDL 373
IWVD V L + +E + +D E ++ Y C +MQI++ + ++ D
Sbjct: 217 IWVDTVSQLQSIMPDLEASTEIAVDLEHHDYRTYYGITC------LMQISTRKNDYLIDT 270
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ L ED+ L + +P I K+ + DI L G L ++
Sbjct: 271 LALREDL-----QILNNVFANPMITKVFHGAFMDIIWLQRDLG-LYVVGLFDTF-HASRA 323
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSC 492
PK L+ L EK +K + ++W RPLS+ YA D LL IF +R+
Sbjct: 324 MGLPKHSLAYLLEKFAQFKTSKKYQLADWRIRPLSKAMHAYARADTHFLLNIFDQMRNS 382
>gi|282879021|ref|ZP_06287783.1| 3'-5' exonuclease [Prevotella buccalis ATCC 35310]
gi|281298856|gb|EFA91263.1| 3'-5' exonuclease [Prevotella buccalis ATCC 35310]
Length = 222
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
KA+ + ++G+D E +P + KG + +VS++Q+A+ E+ F+F L L +
Sbjct: 37 KAVKFLLTQDILGVDTETRPVFRKG-QSYQVSLLQVATKEVCFLFRLNMLG------ITP 89
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE---PKGGLSG 443
+ +L++ +G ++ D+ L H E + K Y +D+Q++ E L
Sbjct: 90 AIKLLLENTQTKMIGLSWHDDLLML-HRRSEFK--KGY--FIDLQDIVGELGIKDLSLQK 144
Query: 444 LAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDA 479
L I ++K +R +NW+Q L+ Q YAA DA
Sbjct: 145 LYANIFHQKISKRQRLTNWDQESLTDKQKLYAATDA 180
>gi|321462436|gb|EFX73459.1| hypothetical protein DAPPUDRAFT_325251 [Daphnia pulex]
Length = 417
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 23/162 (14%)
Query: 331 HIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTR 390
H ++G DCEW + V G ++++Q+AS + V + +P+ L +
Sbjct: 32 HCSEVPILGFDCEW--SNVDG-NTQPIALIQLASHQGVCALVRVCCLSTLPESLKN---- 84
Query: 391 ILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQN-VFKEPKG----GLSGLA 445
IL +P ILK+G D +L G C + D+++ +F+ PK SGL+
Sbjct: 85 ILTNPKILKVGVATWEDASKLKRDLGIQFCGGY-----DVRHLIFRHPKRVSLLSKSGLS 139
Query: 446 EKILGAGLNK--TRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
G LNK + R S+WE LS Q++YAA DA+ + I
Sbjct: 140 ----GTVLNKHFSVRCSDWEAENLSTIQVKYAAQDAIASIAI 177
>gi|442323525|ref|YP_007363546.1| putative ribonuclease D [Myxococcus stipitatus DSM 14675]
gi|441491167|gb|AGC47862.1| putative ribonuclease D [Myxococcus stipitatus DSM 14675]
Length = 389
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 80/187 (42%), Gaps = 19/187 (10%)
Query: 319 VDEVD--GLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKL 376
VD VD G A+ +E + + +D E + ++ +Q+A+D VF+ D ++
Sbjct: 9 VDVVDTEGAQSALGKLEQARELAVDLEADSMHAFRARL---CFLQVATDSDVFLLDTLQ- 64
Query: 377 AEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQ---NV 433
P V L ++ PG K + Q D++ LA E L D +
Sbjct: 65 ----PGVEARLLAPLMGEPGRTKYFHAAQGDLQFLA------EAGVRVRGLFDTHRAATL 114
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCS 493
PK GL+ +A + LG L K + S++ RPL +Y A D L ++ VR +
Sbjct: 115 LGWPKVGLADIAREKLGVELPKEHQQSDFSLRPLPPGMRDYIANDVRYLCELGRQVREAT 174
Query: 494 QPTDVSE 500
+ + E
Sbjct: 175 REAGILE 181
>gi|289743943|gb|ADD20719.1| putative 3'-5' exonuclease [Glossina morsitans morsitans]
Length = 514
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 19/181 (10%)
Query: 323 DGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIAS-DEMVFIFDLIKLAEDVP 381
D + K H KV+G DCEW G V+++Q+AS + +F L +
Sbjct: 67 DMVEKLKRHCWDYKVLGFDCEW---ITIGRVRRPVALLQLASPNGFCGLFRLCHM----- 118
Query: 382 DVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV---FKEPK 438
D + L +L I+K+G + D ++L YG + DI+ + +
Sbjct: 119 DHIPESLKNLLADKDIIKVGVDPAGDARKLRADYG-----IYVASTFDIRYLAVMIRCKP 173
Query: 439 GGLSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPT 496
GL L+ +L K SNWE L +Q+EYAA DA ++IF H+ + +P
Sbjct: 174 LGLEKLSRSLLNVDFVKPWYIARSNWEFDKLDDDQVEYAAKDAFAGVEIFKHLANRLEPR 233
Query: 497 D 497
+
Sbjct: 234 N 234
>gi|410930311|ref|XP_003978542.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Takifugu rubripes]
Length = 620
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 70/149 (46%), Gaps = 7/149 (4%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
V+G DCEW VKG + + VS++Q+A+ + + ++ L L +L+
Sbjct: 106 VLGFDCEWV--SVKG-RASSVSLLQMATYSGLCVLVRLQAFRSCQQPLPPTLVALLRDAR 162
Query: 397 ILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDIQNVFKEPKG-GLSGLAEKILGAGLN 454
+ K+G D K+LA G L C L Q K G L LA +L GL+
Sbjct: 163 LFKVGVGCYEDGKRLARDCGLALSCTVDLRHLALRQKEAKVNNGLSLKSLAADLLNVGLD 222
Query: 455 KT--RRNSNWEQRPLSQNQLEYAALDAVV 481
K+ R S+WE L+ Q+ YAA DA V
Sbjct: 223 KSVELRCSDWEADELTLEQVTYAARDAQV 251
>gi|399156026|ref|ZP_10756093.1| 3'-5' exonuclease [SAR324 cluster bacterium SCGC AAA001-C10]
Length = 218
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Query: 388 LTRILQSPGILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDIQNVFKEPKGGLSGLAE 446
L ++L PG+ K+ + D+ + S E+ F +++ + + + G L L
Sbjct: 65 LKQLLTDPGVTKIFHFAISDVAFIKTSLNIEVAPFCCTKVMSKLIRTYTQGHG-LKDLCL 123
Query: 447 KILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
++LG LNK ++ +NW Q L+Q QLEYAA D + L+QI+H
Sbjct: 124 ELLGHELNKEQQQTNWSQNDLTQKQLEYAAKDVLDLIQIYH 164
>gi|389581646|ref|ZP_10171673.1| ribonuclease D [Desulfobacter postgatei 2ac9]
gi|389403281|gb|EIM65503.1| ribonuclease D [Desulfobacter postgatei 2ac9]
Length = 404
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 80/178 (44%), Gaps = 15/178 (8%)
Query: 309 KELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMV 368
K VV I D+ L + +E C+++G+D E + C K+ ++QIA
Sbjct: 26 KTKVVYQFITTDK--DLAQVCLKLEPCEIIGVDLEADSMH---CFSEKICLIQIAGPNQA 80
Query: 369 FIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYG-ELECFKHYEML 427
++ D + + +P +RIL++P I+K+ + D++ L E+E E+
Sbjct: 81 WLLDPFLINDFLP------FSRILENPEIIKVFHGSDFDVRSLDRELSVEIENLFDTEIA 134
Query: 428 LDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
N+ + GL L + ++K + +W +RPL + + Y+ D L+ +
Sbjct: 135 CRFLNI---KERGLGALLKSFFDIDVDKKYQKVDWSKRPLKEEMIAYSVGDVATLVDL 189
>gi|213865181|ref|ZP_03387300.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Typhi
str. M223]
Length = 200
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 332 IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTR 390
+ C + +D E +V+ ++ ++Q+ V + D + +++ P L
Sbjct: 4 VRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISDWSP------LKA 53
Query: 391 ILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF----KEPKGGLSGLAE 446
+L+ GI K + D++ +++GEL E L+D Q + + G + + E
Sbjct: 54 VLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCGRPLSWGFASMVE 108
Query: 447 KILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 109 EYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 147
>gi|395215204|ref|ZP_10400856.1| 3'-5' exonuclease [Pontibacter sp. BAB1700]
gi|394455924|gb|EJF10318.1| 3'-5' exonuclease [Pontibacter sp. BAB1700]
Length = 395
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 325 LHKAICHIEGCKVVGIDCEWKPN-YVKGCKMNKVSIMQIASDE-MVFIFDLIKLAEDVPD 382
LH+AI +E C + +D E+ N + G + ++QIA + FI D + + P
Sbjct: 22 LHQAIQQLEQCGELAVDLEFDQNRFTYGFNL---CLIQIADGKGNCFIIDPFYIDDLTP- 77
Query: 383 VLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLS 442
++++ P I K+ ++ DI L ++ ++ I N + L+
Sbjct: 78 -----FFQLMEDPTITKIIHHSNNDILLLDKMGCSVKGIVDTDVAAKILNY---ERSSLA 129
Query: 443 GLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ ++ ++K++++SNW +RPL+++QL YAA+D + L +I
Sbjct: 130 TVLKEEFDKEIDKSQQSSNWNKRPLTEDQLRYAAIDVIYLHKI 172
>gi|153001896|ref|YP_001367577.1| 3'-5' exonuclease [Shewanella baltica OS185]
gi|151366514|gb|ABS09514.1| 3'-5' exonuclease [Shewanella baltica OS185]
Length = 315
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 70/140 (50%), Gaps = 9/140 (6%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
V+G D E + ++ +G + + +S++QIA+ + ++F L E + L +L+
Sbjct: 132 VLGFDTETRASFERGVQ-HPLSLIQIATADACYLFQHAILGEQF-----TQLKTVLEDEN 185
Query: 397 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKT 456
ILK+G + D + L +G + ++ + + E + G L +LG ++K
Sbjct: 186 ILKVGVGLRSDAQALKRQWG-INVASKLDLNWALAQLGAEKEMGTRQLVATLLGTRIDKP 244
Query: 457 RRN--SNWEQRPLSQNQLEY 474
++ SNW+ PLS Q++Y
Sbjct: 245 KKITLSNWQHVPLSSAQIDY 264
>gi|71032543|ref|XP_765913.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352870|gb|EAN33630.1| hypothetical protein TP01_0386 [Theileria parva]
Length = 1786
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 29/220 (13%)
Query: 306 LHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGC--KMNKVSIMQIA 363
++ L+++ II+VD D L + K VG+D E G N++ ++Q++
Sbjct: 1190 VNFDPLLIDGIIYVDSYDKLQSLEPLFKDPKAVGVDIE-----TTGLDHNTNQIRLVQLS 1244
Query: 364 -SDEMVFIFDLIKLAEDVPDV---------LDSC--LTRILQSPGILKLGYNFQCDIKQL 411
++ I DL KL+ + PD L C L ++ +S +K+ +N + DI L
Sbjct: 1245 VPNQPSLIIDLFKLSTNNPDAESVVPGRNELIKCEWLKKLFKSKETVKVFHNGKFDINFL 1304
Query: 412 AHSYG-ELECFKHYEML---LDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPL 467
YG E E M+ L + + + K L+ ++E+ L L+KT++ S+W L
Sbjct: 1305 -RVYGFEFEGPIFDTMVASKLLVASRYISCK--LTHVSERYLNIVLDKTQQYSDWSTLQL 1361
Query: 468 SQNQLEYAALDAVVLLQ---IFHHVRSCSQPTDVSEGHDK 504
+ QL Y+A D+ VLL I H+ + +D++ +K
Sbjct: 1362 FEEQLLYSARDSFVLLPLYVILEHLLKINNLSDIASVENK 1401
>gi|237800267|ref|ZP_04588728.1| ribonuclease D [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331023124|gb|EGI03181.1| ribonuclease D [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 377
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 83/178 (46%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + V +D E +++ ++ ++QI + ++ D
Sbjct: 4 DIHWIRDDDSLALYCAQWQSLPFVALDTE----FMRVDTFYPIAALLQIGDGKSAWLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + + P L+ +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LLINDWRP------LSALLENPDVIKVVHACSEDLEVLLRLTGSLPV-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++L L K S+W QRPLS+ Q+ YAA DAV L ++F +R
Sbjct: 113 NLGFSMGYSRLVQEVLDIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAELFAILRP 170
>gi|242003018|ref|XP_002422581.1| 3-5 exonuclease, putative [Pediculus humanus corporis]
gi|212505371|gb|EEB09843.1| 3-5 exonuclease, putative [Pediculus humanus corporis]
Length = 522
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 18/152 (11%)
Query: 338 VGIDCEWKPNYVKGCKMNKVSIMQIAS-DEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
+G DCEW +V+ V+++Q+A+ + ++F L KL+ ++ L IL+
Sbjct: 29 LGFDCEWVSYHVR----YPVALLQLATYKKDCYLFRLNKLS-----IIPFELIEILEDQH 79
Query: 397 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKT 456
I KLG D L+ Y + D++ ++ KG L LA+ +LG LNK
Sbjct: 80 IFKLGVLPAIDGLYLSADYD-----IRVQTTFDLRYLYPMCKG-LGDLAKVVLGIMLNKD 133
Query: 457 R--RNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
S+WE LS +Q +YAA+DA+V + +F
Sbjct: 134 GIIAGSDWECHELSYSQKKYAAMDALVAIDVF 165
>gi|402701916|ref|ZP_10849895.1| ribonuclease D [Pseudomonas fragi A22]
Length = 377
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 83/178 (46%), Gaps = 12/178 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + D L + + V +D E +++ ++ ++QI E ++ D
Sbjct: 4 DIHWIRDNDSLGQHCAEWQSLPFVALDTE----FMRVDTFYPIAGLIQIGDGERAYLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + P L+ +L++P ++K+ + D++ L G L ++ L +
Sbjct: 60 LTIDNWQP------LSDLLENPAVVKVLHACSEDLEVLLRLTGSLPA-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G S L +++L L K S+W QRPLS+ Q+ YAA DA+ L +++ +R
Sbjct: 113 NLGFSMGYSRLVKEVLDLDLPKGETRSDWLQRPLSETQISYAAEDALHLAEVYVLLRP 170
>gi|321445960|gb|EFX60794.1| hypothetical protein DAPPUDRAFT_341412 [Daphnia pulex]
Length = 292
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 86/172 (50%), Gaps = 20/172 (11%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
++G DCEW + V G ++++Q+AS + V + +P+ L + IL +P
Sbjct: 87 ILGFDCEW--SNVDG-NTQPIALIQLASHQGVCSLVRVCCLSTLPESLKN----ILTNPK 139
Query: 397 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPK-------GGLSGLAEKIL 449
ILK+ D +L G C +Y L +F+ PK GL GL+E++L
Sbjct: 140 ILKVEVVTWEDASKLKRDLGMQFCGGYYVRHL----IFRHPKRESLLSKSGLLGLSEQLL 195
Query: 450 GAGLNK--TRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVS 499
G LNK + R S+WE LS Q++YAA DA+ + I + + ++ D+S
Sbjct: 196 GTVLNKHFSVRCSDWEAENLSTIQVKYAAQDAIASIAICLKLVAETRAPDLS 247
>gi|367038611|ref|XP_003649686.1| hypothetical protein THITE_2108463 [Thielavia terrestris NRRL 8126]
gi|346996947|gb|AEO63350.1| hypothetical protein THITE_2108463 [Thielavia terrestris NRRL 8126]
Length = 455
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 336 KVVGIDCEWKPNYVK--GCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQ 393
K++G D EW N K G + N VS++Q+AS + +F + ++ L R+++
Sbjct: 207 KILGFDLEWMVNAPKSFGPRKN-VSLIQLASPSRIGLFHVAAYPRKD-SLVAPSLKRLME 264
Query: 394 SPGILKLGYNFQCDIKQLA-----HSYGELECFKHYEML----LDIQNVFKEPKGGLSGL 444
I K+G + D +L+ + G+ E Y+++ +++ + L+
Sbjct: 265 DSAITKVGVCIKGDCTRLSAFLHIKTRGQFELSHLYKLVKYSEINMPGAINKRTVSLAAQ 324
Query: 445 AEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
E LG L K R SNW QR L Q+ Y+A DA LQ++
Sbjct: 325 VEDCLGLPLFKGGDVRKSNWSQR-LDMEQIRYSASDAYAALQLY 367
>gi|302501205|ref|XP_003012595.1| exosome complex exonuclease Rrp6, putative [Arthroderma benhamiae
CBS 112371]
gi|291176154|gb|EFE31955.1| exosome complex exonuclease Rrp6, putative [Arthroderma benhamiae
CBS 112371]
Length = 1069
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 9/175 (5%)
Query: 317 IWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKL 376
I+V+ ++ +H + ++ K + +D E ++V V +MQI++ E +I D +K
Sbjct: 431 IFVETLEDVHAMLSQLKQAKEIAVDLEHHDSHVY---HGLVCLMQISTREQDWIVDTLKP 487
Query: 377 AEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE 436
D VL+ + P I+K+ + D+ L G L ++ + +
Sbjct: 488 WRDQLQVLNE----VFADPSIIKVLHGSSMDVIWLQRDLG-LYLVGLFDTF-HAASALQL 541
Query: 437 PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
PK L L + +G +K + ++W RPL L+YA D LL IF +R+
Sbjct: 542 PKKSLKFLLHEYVGFDADKQYQTADWRIRPLLAGMLDYARSDTHFLLYIFDRLRN 596
>gi|159480884|ref|XP_001698512.1| hypothetical protein CHLREDRAFT_142979 [Chlamydomonas reinhardtii]
gi|158282252|gb|EDP08005.1| predicted protein [Chlamydomonas reinhardtii]
Length = 3780
Score = 52.0 bits (123), Expect = 8e-04, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 36/171 (21%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPD-------------- 382
VVG+D EW P G + +++S++Q+++ + ++ PD
Sbjct: 172 VVGLDAEWAPELKPGVR-HRISVIQLSTADCCWVL------RPPPDRGGASAAVGGASGG 224
Query: 383 -----------VLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQ 431
L + + R+L P ++K G Q D+K+L +G + ++ L Q
Sbjct: 225 AGSEGAGNGHPALPAAVVRVLTDPRVVKAGVGIQEDVKRLERDFG-VRVRGAVDVRLVAQ 283
Query: 432 NVFKE---PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDA 479
V + G L L +LG L+K + S+W L Q Q+ YAA DA
Sbjct: 284 RVAPDCLAAGGSLQALTGSLLGRRLDKGPQRSDWGAGRLDQRQVVYAAHDA 334
>gi|352106222|ref|ZP_08961273.1| ribonuclease D [Halomonas sp. HAL1]
gi|350597870|gb|EHA13995.1| ribonuclease D [Halomonas sp. HAL1]
Length = 377
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 73/179 (40%), Gaps = 31/179 (17%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
W+D + L A + V+ +D E+ + + +++Q + E ++ D + +
Sbjct: 12 WLDTPEALDAACDQVADASVIALDTEF---FRENTFFPVPALIQFTAGEEAYLIDPVAV- 67
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGE-LECFKHYE-----MLLDIQ 431
P K Q +L HS E LE F+H+ L+D Q
Sbjct: 68 -----------------PCTDKFRALLQNRAIKLLHSCSEDLEVFQHWAGVLPVPLIDTQ 110
Query: 432 NV----FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
V + P G L E +G L K SNW RPLS Q YAALD + LL+++
Sbjct: 111 VVQGFLGENPGMGYQKLVEFWVGETLPKEETRSNWLVRPLSPAQCHYAALDVIYLLKVW 169
>gi|297597578|ref|NP_001044182.2| Os01g0737700 [Oryza sativa Japonica Group]
gi|255673666|dbj|BAF06096.2| Os01g0737700 [Oryza sativa Japonica Group]
Length = 233
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 19/175 (10%)
Query: 318 WVDEVDGLH-KAICHIEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIK 375
W+DE+ +H + + H+ +VG+D EW P G C + V+++QI +F +I
Sbjct: 62 WLDEIVRIHHRRLDHL----IVGLDVEWNP--ASGFCALGPVAVLQICVGRRCLVFQIIH 115
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK 435
A+ VPD L L +G D+ +L Y +LE ++
Sbjct: 116 -ADYVPDQLGD----FLGDGRFTFVGVGIHDDVDKLREHY-DLEVENAVDLRYLAAQTIG 169
Query: 436 EP---KGGLSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+P GL GL +++ + K R S W+ R L+ +Q+ YA DA ++
Sbjct: 170 KPALRSTGLQGLVWEVMDVWMEKPHHVRVSAWDSRQLTLDQVMYACADAFASFEV 224
>gi|91092754|ref|XP_973448.1| PREDICTED: similar to GM14514p [Tribolium castaneum]
gi|270014889|gb|EFA11337.1| hypothetical protein TcasGA2_TC010877 [Tribolium castaneum]
Length = 237
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 21/179 (11%)
Query: 323 DGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASD----EMVFIFDLIKLAE 378
D L K V+G D EW ++ G K +++QI+ D ++ I DL KL +
Sbjct: 58 DNLIKLADEAADVLVLGFDVEWPFSFQTGP--GKAALIQISPDLDTCYLIQISDLKKLPK 115
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDI-----QNV 433
L+ +L P + G N + DI++L+ + + K+ E +D Q +
Sbjct: 116 G--------LSVLLAHPKVRITGVNIKNDIRKLSRDFAGFDVEKNIENCIDSGVLANQIL 167
Query: 434 FKEPKGGLSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
+ + + L +L ++K R S W PLS+ QL+YAA DA L +++ ++
Sbjct: 168 PFQQRWSMERLVTFLLKMTISKDNKVRMSKWHVSPLSKEQLDYAATDAYASLVLYNELK 226
>gi|417365333|ref|ZP_12138001.1| Ribonuclease D [Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
gi|353594759|gb|EHC52176.1| Ribonuclease D [Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
Length = 371
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 21/171 (12%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAE 378
E D ++C + C + +D E +V+ ++ ++Q+ V + D + +++
Sbjct: 3 ETDDALASLCEAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISD 58
Query: 379 DVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF---- 434
P +L+ GI K + D++ +++GEL E L+D Q +
Sbjct: 59 WSP------FKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCG 107
Query: 435 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 108 RPLSWGFAAMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 158
>gi|426363764|ref|XP_004049003.1| PREDICTED: probable exonuclease mut-7 homolog, partial [Gorilla
gorilla gorilla]
Length = 554
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 336 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV----PDVLDSCLTRI 391
+ VGID EW P +V G + + S++Q+A + VF+ D++ L++ + ++
Sbjct: 394 QAVGIDLEWTPVFVAGGR-PRPSLLQVAVEGHVFLLDVLALSQPPTGQGAQAFSQLVAQL 452
Query: 392 LQSPGILKLGYNFQCDIKQLAHS 414
L P I KLGY D+++L S
Sbjct: 453 LSDPSITKLGYGMVGDLQKLGTS 475
>gi|402081160|gb|EJT76305.1| hypothetical protein GGTG_06225 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 725
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 21/167 (12%)
Query: 337 VVGIDCEW--KPNYVKGCKMNKVSIMQIASDEMVFIFD--LIKLAEDVPDVLDSCLTRIL 392
++G D EW N G + N VS++Q+AS + +F L EDV V+ L RI+
Sbjct: 221 ILGFDLEWALDANRYSGPRRN-VSLIQLASPSRIALFHVALFPPNEDV-TVVAPTLRRIM 278
Query: 393 QSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGG--------LSGL 444
+ P I K G + + D +L ++ +++ +E L + + K + G L L
Sbjct: 279 EDPAITKCGVSIKADCTRL-RNFLKIDSRGVFE-LSHLFRLVKYSRTGETNLINKRLVSL 336
Query: 445 AEKIL---GAGLNK--TRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
AE+ L G L K R S W + PL +Q+ Y+A DA +QI+
Sbjct: 337 AEQTLTTLGLPLYKGIDVRWSQWWKSPLQMDQILYSASDAYAAIQIY 383
>gi|383812289|ref|ZP_09967727.1| 3'-5' exonuclease [Prevotella sp. oral taxon 306 str. F0472]
gi|383354849|gb|EID32395.1| 3'-5' exonuclease [Prevotella sp. oral taxon 306 str. F0472]
Length = 222
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 15/174 (8%)
Query: 327 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 386
KA+ ++ ++G+D E +P + KG + KV+++Q ++ F+F L + +PD
Sbjct: 39 KAVDYLLSRDIIGVDTETRPVFKKGHR-RKVALLQACDHDVCFLFRLNYIG--IPD---- 91
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE---PKGGLSG 443
C+ R L+ + K+G + D+ L FK +D+Q+ K L
Sbjct: 92 CIKRFLEDTTVPKVGLSLSDDMLMLHQRAN----FKP-GYFIDLQDYVKSLGIEDMSLQK 146
Query: 444 LAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
L + + K + SNWE L+ Q YA+ DA ++++ + + D
Sbjct: 147 LYANVFHERIAKREQLSNWENEVLNDKQKLYASTDAWTCIKLYERLHEMKETGD 200
>gi|339444858|ref|YP_004710862.1| ribonuclease D [Eggerthella sp. YY7918]
gi|338904610|dbj|BAK44461.1| ribonuclease D [Eggerthella sp. YY7918]
Length = 381
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 84/193 (43%), Gaps = 34/193 (17%)
Query: 337 VVGIDCEW---KPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS--CLTRI 391
V+ ID E+ K Y K C ++Q+A+D+ V I D P LD L +
Sbjct: 21 VLAIDTEFMREKTYYAKLC------LIQLATDDEVAIVD--------PFALDDLGALAPV 66
Query: 392 LQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK----EPKGGLSGLAEK 447
LQ+ ++KL + + D++ + G L + L D Q + G + L
Sbjct: 67 LQNEQVMKLFHAGRQDLEIILREVGVLP-----KPLFDTQVAAALLGHTQQIGYAALVHA 121
Query: 448 ILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSEGHDKIEW 507
G L K ++W +RPLS++QLEYAA D V L +++ +R +++ W
Sbjct: 122 ECGVTLKKIDSFTDWSRRPLSESQLEYAADDVVYLPRMYERMRGQLMKL------NRLSW 175
Query: 508 KSYIVSHMDNPKK 520
+ NP K
Sbjct: 176 LDPDFEELSNPAK 188
>gi|169617554|ref|XP_001802191.1| hypothetical protein SNOG_11959 [Phaeosphaeria nodorum SN15]
gi|111059251|gb|EAT80371.1| hypothetical protein SNOG_11959 [Phaeosphaeria nodorum SN15]
Length = 805
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 15/177 (8%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
+VD + + + + ++ K + +D E N + VS+MQI++ + +I D +K
Sbjct: 234 YVDTPEAVAEMLAELKTAKEIAVDLEHHDNR---SYIGMVSLMQISTRDKDWIVDTLKPW 290
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE- 436
+ CL + P ILK+ + DI L G + L D + +
Sbjct: 291 RRKLE----CLNEVFADPNILKVLHGAYMDIMWLQRDLG-----LYIVGLFDTHHAARSL 341
Query: 437 --PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
P G L+ L E+ + K + ++W RPL + EYA D LL IF ++R+
Sbjct: 342 GYPGGSLAYLLERHVQFKAQKQYQLADWRIRPLGKELFEYARADTHFLLYIFDNMRN 398
>gi|422301825|ref|ZP_16389190.1| 3'-5' exonuclease domain protein [Microcystis aeruginosa PCC 9806]
gi|389789068|emb|CCI14868.1| 3'-5' exonuclease domain protein [Microcystis aeruginosa PCC 9806]
Length = 305
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 17/185 (9%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASD---EMVFIFDLI 374
++ E D + AI H ++ +D E K +++ + I+ ++D E V I D++
Sbjct: 3 YLTESDAIRNAIDHFCHFPILWLDTEVADYDSKTPRLSLIQILADSTDLTGERVTILDVL 62
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQN-- 432
D PD++D +T+I+ I K+ +N D K L G K L++
Sbjct: 63 ----DRPDLIDYFITKIMLVDRIEKVFHNASYDCKFL----GGKGKVKKITCTLELAKKV 114
Query: 433 ---VFKEPKGGLSGLAEKILG-AGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHH 488
+ P L +AE + ++K+ + NW +RPL+ QLEYA D V QI H
Sbjct: 115 PYYIAPLPNYQLKTVAECLCHFPAIDKSEQGGNWGKRPLTVAQLEYAQKDPVYTAQIHHR 174
Query: 489 VRSCS 493
+ S
Sbjct: 175 LLQLS 179
>gi|372271279|ref|ZP_09507327.1| ribonuclease D [Marinobacterium stanieri S30]
Length = 393
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 7/124 (5%)
Query: 359 IMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGEL 418
++Q+A DE ++ D +++ + P L ++L P +LK+ + D++ HSYG L
Sbjct: 60 LIQVADDEACYLVDPLEVDDFAP------LAQVLSCPDVLKVVHAGSEDMELFRHSYGVL 113
Query: 419 ECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALD 478
Y+ + GL L L L+K S+W QRPL+ Q YAALD
Sbjct: 114 PS-PLYDTQVGAAFAGWGFSMGLRRLVAHALDVELDKEETTSDWLQRPLTPEQERYAALD 172
Query: 479 AVVL 482
L
Sbjct: 173 VAYL 176
>gi|256822615|ref|YP_003146578.1| ribonuclease D [Kangiella koreensis DSM 16069]
gi|256796154|gb|ACV26810.1| ribonuclease D [Kangiella koreensis DSM 16069]
Length = 384
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 18/161 (11%)
Query: 334 GCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQ 393
K + +D E+ ++++++QI + +++ D + +D+ S LT +
Sbjct: 33 ALKELAVDTEFDRT---NTYFHRLALIQIYDGKEIYLIDPLAF-DDL-----SALTELFA 83
Query: 394 SPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLS----GLAEKIL 449
S ++K ++ D++ L H YG + + D Q GLS + E L
Sbjct: 84 STSVVKALHSCSEDLEALYHQYG-----FEFNQVFDTQIAASLDGIGLSVGYGNIVEHFL 138
Query: 450 GAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
L+K ++W QRPLSQ Q YAA D L+ +++ +R
Sbjct: 139 SVVLDKEHTKTDWLQRPLSQEQRVYAAQDVQYLMPVYYRLR 179
>gi|441432317|ref|YP_007354359.1| 3'-5' exonuclease [Acanthamoeba polyphaga moumouvirus]
gi|440383397|gb|AGC01923.1| 3'-5' exonuclease [Acanthamoeba polyphaga moumouvirus]
Length = 363
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 78/146 (53%), Gaps = 22/146 (15%)
Query: 356 KVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY 415
KVSI+QI++ + I + K++ VL + L +L +P I+K+G + + D+ ++ +
Sbjct: 118 KVSIIQISTQDNNLIVQVNKMS-----VLPTKLYEMLINPEIIKVGISIKNDMIKIMKYF 172
Query: 416 GELECFKHYEMLLDIQNVFK----EPKG------GLSGLAEKILGAGL-NKTR---RNSN 461
EL K + +LD+ ++ K E G GL LA +LG + NK + SN
Sbjct: 173 TEL---KFVKCVLDLSDLVKLLQVEKFGNVNNSIGLKMLAASVLGLYIENKDLSEVKKSN 229
Query: 462 WEQRPLSQNQLEYAALDAVVLLQIFH 487
W L+ +Q+ YA D+++ L+I++
Sbjct: 230 WNNDILTTDQINYAITDSIITLKIYN 255
>gi|307544648|ref|YP_003897127.1| ribonuclease D [Halomonas elongata DSM 2581]
gi|307216672|emb|CBV41942.1| ribonuclease D [Halomonas elongata DSM 2581]
Length = 395
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 37/203 (18%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKV-SIMQIASDEMVFIFDL 373
+I W+D + L +A + V+ +D E + + + V +++Q ++ D
Sbjct: 24 EIRWIDTPEALDEACAEVAEADVIALDTE----FFREKTFHPVPALVQFCVGGAAYLVDP 79
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHY-----EMLL 428
+A R+L + +K L S +LE F H+ L+
Sbjct: 80 TVVA------CTDAFRRLLG-----------EGPVKLLHASSEDLEVFLHWAGVTVSPLV 122
Query: 429 DIQ---NVFKE-PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQ 484
D Q + E P G L E +G L K SNW +RPLS+ Q YAALD + LL+
Sbjct: 123 DTQIAQALLGEVPAMGYQKLVEFWVGETLPKDETRSNWLERPLSETQTTYAALDVIYLLE 182
Query: 485 IFHHVRSCSQPTDVSEGHDKIEW 507
++ R D E + ++ W
Sbjct: 183 VWQVQR------DALERYGRLGW 199
>gi|242054353|ref|XP_002456322.1| hypothetical protein SORBIDRAFT_03g033970 [Sorghum bicolor]
gi|241928297|gb|EES01442.1| hypothetical protein SORBIDRAFT_03g033970 [Sorghum bicolor]
Length = 208
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 11/154 (7%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
+VGID EW+P+ + V+++QI +F ++ A+ VP L+ L
Sbjct: 52 IVGIDVEWRPSRTTTNHVPPVALLQICVGRRCLVFKILH-ADYVP----QSLSDFLADQR 106
Query: 397 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPK---GGLSGLAEKILGAGL 453
+G + D +L YG L+ + ++ ++P GL L +++G +
Sbjct: 107 FAFVGVGVRDDAAKLRSGYG-LKVGRMVDLRTLAATKLRKPALRGAGLQALVSEVMGVEM 165
Query: 454 NKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQI 485
K R S W+ L+ +QL+YA DA ++
Sbjct: 166 EKPHHVRVSAWDAPKLTYDQLKYACADAFASFEV 199
>gi|390439517|ref|ZP_10227909.1| 3'-5' exonuclease domain protein [Microcystis sp. T1-4]
gi|389837083|emb|CCI32033.1| 3'-5' exonuclease domain protein [Microcystis sp. T1-4]
Length = 305
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 103/233 (44%), Gaps = 28/233 (12%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASD---EMVFIFDLI 374
++ E D + AI H ++ +D E K +++ + I+ ++D E V I D++
Sbjct: 3 YLTESDAIRNAIDHFCHFPILWLDTEVADYDSKTPRLSLIQILADSTDLTGERVTILDVL 62
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQN-- 432
D PD+ + +T+I+ I K+ +N D K L G K L++
Sbjct: 63 ----DRPDLTNYFITKIMLVDRIEKVFHNASYDCKFL----GGKGQVKKITCTLELAKKV 114
Query: 433 ---VFKEPKGGLSGLAEKILG-AGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHH 488
+ P L LAE + ++KT + NW +RPL+ QLEYA D V QI H
Sbjct: 115 PYYIAPLPNYQLKTLAECLCHFPPIDKTEQGGNWGKRPLTAAQLEYAQKDPVYTAQIHHR 174
Query: 489 VRSCSQ---PTDVSEGHDKIE---WKSY-----IVSHMDNPKKSKKRPTIKKE 530
+ S P E +++ W+ Y + + M++ K+ K I++E
Sbjct: 175 LLQLSHLITPDPAGENLERLTNRYWEIYQQWKILDTEMEHLKERLKSAMIEQE 227
>gi|224003495|ref|XP_002291419.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973195|gb|EED91526.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 181
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 55/125 (44%), Gaps = 12/125 (9%)
Query: 369 FIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLL 428
F+ D + L +P +CL IL +P ILK+ + DI L +G C+ L
Sbjct: 62 FLIDALSLRHVIP----TCLGPILANPNILKVMHGADSDIPWLQRDFG---CY--VVNLF 112
Query: 429 DI---QNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
D K GL+ L K G +K + S+W +RPL + YA D LL I
Sbjct: 113 DTGRASRALKFQSAGLAFLLRKYAGLDPDKAHQLSDWRRRPLPDDMRTYAVADTRYLLDI 172
Query: 486 FHHVR 490
+ +R
Sbjct: 173 YDKLR 177
>gi|167035116|ref|YP_001670347.1| ribonuclease D [Pseudomonas putida GB-1]
gi|166861604|gb|ABZ00012.1| ribonuclease D [Pseudomonas putida GB-1]
Length = 377
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 15/140 (10%)
Query: 356 KVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY 415
K ++QI + F+ D + + + P L +L+ G++K+ + D++ L
Sbjct: 42 KAGLIQIGDGQRAFLIDPLLIGDWQP------LADLLEDSGVVKVLHACSEDLEVLLRLT 95
Query: 416 GELECFKHYEMLLDIQNVFKEPKGGLS----GLAEKILGAGLNKTRRNSNWEQRPLSQNQ 471
G+L + L D Q G S L + +LG L K S+W QRPLS+ Q
Sbjct: 96 GKLP-----QPLFDTQLAAGYLNLGFSMGYSRLVQDVLGIELPKGETRSDWLQRPLSETQ 150
Query: 472 LEYAALDAVVLLQIFHHVRS 491
+ YAA DAV L ++F +R
Sbjct: 151 VSYAAEDAVHLAELFTELRP 170
>gi|371945013|gb|AEX62834.1| putative 3'-5'exonuclease [Moumouvirus Monve]
Length = 402
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 78/146 (53%), Gaps = 22/146 (15%)
Query: 356 KVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY 415
KVSI+QI++ + I + K++ VL + L +L +P I+K+G + + D+ ++ +
Sbjct: 157 KVSIIQISTQDNNLIVQVNKMS-----VLPTKLYEMLINPEIIKVGISIKNDMIKIMKYF 211
Query: 416 GELECFKHYEMLLDIQNVFK----EPKG------GLSGLAEKILGAGL-NKTR---RNSN 461
EL K + +LD+ ++ K E G GL LA +LG + NK + SN
Sbjct: 212 TEL---KFVKCVLDLSDLVKLLQVEKFGNVNNSIGLKMLAASVLGLYIENKDLSEVKKSN 268
Query: 462 WEQRPLSQNQLEYAALDAVVLLQIFH 487
W L+ +Q+ YA D+++ L+I++
Sbjct: 269 WNNDILTTDQINYAITDSIITLKIYN 294
>gi|358368335|dbj|GAA84952.1| exosome complex exonuclease Rrp6 [Aspergillus kawachii IFO 4308]
Length = 784
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 13/176 (7%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLA 377
+VD +G+ + + ++ K + ID E ++ VS+MQI++ + ++ D +K
Sbjct: 230 FVDTQEGVKEMLEELKAAKEIAIDLE---HHDVHSYQGLVSLMQISTRDKDWVVDTLKPW 286
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYG--ELECFKHYEMLLDIQNVFK 435
+ VL+ T P ILK+ + DI L G + F Y
Sbjct: 287 REELQVLNEVFT----DPNILKVLHGSSMDIIWLQRDLGLYVVGMFDTYHAAC----ALN 338
Query: 436 EPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
PK L L +K + +K + ++W RP+ + +YA D LL I+ H+R+
Sbjct: 339 YPKRSLKFLLQKFVNFEADKRYQMADWRIRPIPEGMFDYARSDTHYLLHIYDHIRN 394
>gi|398964229|ref|ZP_10680176.1| ribonuclease D [Pseudomonas sp. GM30]
gi|398148804|gb|EJM37472.1| ribonuclease D [Pseudomonas sp. GM30]
Length = 377
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 12/173 (6%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVS-IMQIASDEMVFIFDL 373
DI W+ + + L + + V +D E +++ ++ ++Q+ + ++ D
Sbjct: 4 DIHWIRDNESLAQFCAEWQQLPFVALDTE----FMRVDTFYPIAGLLQVGDGKRAYLIDP 59
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ + P L +L++P +LK+ + D++ L G L ++ L +
Sbjct: 60 LTIDAWQP------LAALLENPAVLKVLHACSEDLEVLLRLTGSLPA-PLFDTQLAAAYL 112
Query: 434 FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
G S L +++LG L K S+W QRPLS Q+ YAA DAV L ++F
Sbjct: 113 NLGFSMGYSRLVQEVLGIELPKGETRSDWLQRPLSDTQISYAAEDAVHLAEVF 165
>gi|427717875|ref|YP_007065869.1| cell division protein FtsK [Calothrix sp. PCC 7507]
gi|427350311|gb|AFY33035.1| cell division FtsK/SpoIIIE [Calothrix sp. PCC 7507]
Length = 879
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 33/219 (15%)
Query: 325 LHKAICHIEGCKVVGIDCE---WKPNYVKGCKMNKVSIMQIAS-DEMVFIFDLIKLAEDV 380
+ + I + + + +D E W Y K + +V I I S V+I D+++
Sbjct: 10 IRELISKLAAAQTLWLDTEIANWNTYYPK-LSLIQVLISPIDSRGASVYILDVLEKR--- 65
Query: 381 PDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGG 440
D+ + +I+ +P I+K+ +N D+K L G+L K+ L + +
Sbjct: 66 -DLAAYFINQIMTNPNIVKVFHNASFDVKYLG---GQLA--KNVTCTLQLARKITRQRLQ 119
Query: 441 LSGLAEKILGAGL------NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQ 494
+S L K L A L + + S+W QRPLS Q++YAA+D V L + + SQ
Sbjct: 120 VSNLKLKTLAAELCHFSNVDTEEQRSDWGQRPLSGKQIQYAAMDTVYLAAVHRRLLEISQ 179
Query: 495 PTDVSEGHDKIEWKSYIVSHMDNPKKSKKRPTIKKETES 533
P ++ I + +DN K+ T K E+ S
Sbjct: 180 PEIINN----------IFAMVDN---GSKQSTNKSESSS 205
>gi|393907978|gb|EJD74851.1| 3'-5' exonuclease [Loa loa]
Length = 728
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 440 GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
GLS L +++LG L+KT + S W++RPL QL YAALDA +L ++
Sbjct: 647 GLSALCKRVLGKPLDKTEQCSVWDRRPLRDLQLRYAALDAYCMLMLY 693
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 338 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGI 397
VG+D EW +YV +K +I+Q+A +FI D+ ++ D+ V ++ +
Sbjct: 439 VGVDAEWS-SYVS---YSKATILQLAIPYHIFIIDVDEIKSDILVVF---FEKLFVEWKL 491
Query: 398 LKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK 435
LK+GY F D+ QL + H + L+ I + K
Sbjct: 492 LKIGYQFDEDLIQLRSAVQRCSALYHPKNLICIGKLVK 529
>gi|347760629|ref|YP_004868190.1| ribonuclease D [Gluconacetobacter xylinus NBRC 3288]
gi|347579599|dbj|BAK83820.1| ribonuclease D [Gluconacetobacter xylinus NBRC 3288]
Length = 395
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 25/206 (12%)
Query: 325 LHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVL 384
L + G V ID E+ + ++ ++Q+A + V + D P +
Sbjct: 21 LEAVTTRLRGEPFVTIDTEF---VRERTYWPELCLVQLAGKDDVVVIDTT-----APGID 72
Query: 385 DSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKG----- 439
S L +L G++K+ + + D++ H + L L D Q V G
Sbjct: 73 LSSLGELLDDAGVVKVFHAARQDLEIFLHLFDRLPA-----ALFDTQ-VAAMVAGHGDQV 126
Query: 440 GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVS 499
G L +LG ++K+ R S+W RPLS Q+ YAA D L ++ + + Q
Sbjct: 127 GYDNLVWSLLGVQIDKSHRFSDWSARPLSPAQIGYAAADVTYLRLVYDKLLTQLQ----Q 182
Query: 500 EGHDKIEWKSYIVSHMDNPKKSKKRP 525
EG ++EW + + ++NP + P
Sbjct: 183 EG--RLEWVAAELDVLNNPATFRPDP 206
>gi|436670107|ref|YP_007317846.1| DNA polymerase I family protein with 3'-5'-exonuclease and
polymerase domains [Cylindrospermum stagnale PCC 7417]
gi|428262379|gb|AFZ28328.1| DNA polymerase I family protein with 3'-5'-exonuclease and
polymerase domains [Cylindrospermum stagnale PCC 7417]
Length = 592
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 90/176 (51%), Gaps = 23/176 (13%)
Query: 319 VDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCK--MNKVSIMQIASDEMVFIFDLIKL 376
V V L+ A+ + +V+ +DCE G ++ + ++QIA+ + LI+L
Sbjct: 21 VSNVSTLNSALKPLFQAEVLALDCE-----TTGLDPLIDSIKLIQIAAPNYPVV--LIEL 73
Query: 377 AEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE 436
+P + + L + L S LK+ +N + D + L+ + L L D Q +K
Sbjct: 74 PA-IPKI-NRLLLKKLLSNSALKIAHNAKFDWQFLSQAGLHLSG-----RLFDTQLAYKV 126
Query: 437 PKGGL------SGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
GL + +K+L L+KT++ S+W +PL+Q+QL+YAALDA +LL ++
Sbjct: 127 LTSGLKTSSSLQNIVQKLLQIQLDKTQQISDW-CKPLTQSQLQYAALDAAILLDLY 181
>gi|255075999|ref|XP_002501674.1| predicted protein [Micromonas sp. RCC299]
gi|226516938|gb|ACO62932.1| predicted protein [Micromonas sp. RCC299]
Length = 725
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%)
Query: 440 GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
GLS L +LG L+K R S+W +RPL+ Q+ YAALDA VL+++ +R
Sbjct: 656 GLSHLTAAVLGKPLDKATRMSDWSKRPLTPRQVTYAALDAWVLVELMRTLR 706
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 357 VSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAH 413
V+++Q+A+ + VF+ DL L PD + L +L +LK G+ D+++LA
Sbjct: 503 VALLQVATRDRVFLVDLPALLRACPDAIAPTLGAVLADRSVLKTGFGLAEDLRRLAR 559
>gi|417458658|ref|ZP_12164024.1| Ribonuclease D, partial [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|353633168|gb|EHC80047.1| Ribonuclease D, partial [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
Length = 375
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 20/168 (11%)
Query: 323 DGLHKAICHIEGCKVVGIDCEWKPNYVKG-CKMNKVSIMQIASDEMVFIFDLIKLAEDVP 381
D L + C + +D E +V+ ++ ++Q+ V + D + +++ P
Sbjct: 10 DALASLCEAVRACPAIALDTE----FVRTRTYYPQLGLIQLFDGANVALIDPLGISDWSP 65
Query: 382 DVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF----KEP 437
L +L+ GI K + D++ +++GEL E L+D Q + +
Sbjct: 66 ------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCGRPL 114
Query: 438 KGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 115 SWGFASMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 162
>gi|296117272|ref|ZP_06835863.1| ribonuclease D [Gluconacetobacter hansenii ATCC 23769]
gi|295976165|gb|EFG82952.1| ribonuclease D [Gluconacetobacter hansenii ATCC 23769]
Length = 421
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 16/136 (11%)
Query: 359 IMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGEL 418
++Q+AS + V + D + D+ + L +L G++K+ + + D++ H + L
Sbjct: 73 LVQLASADEVVVVDALAPGMDL-----APLGELLADEGVIKVFHAARQDLEIFLHLFDRL 127
Query: 419 ECFKHYEMLLDIQNVFKEPKG-----GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLE 473
+ L D Q V G G L ++GA ++K+ R S+W RPLS Q+E
Sbjct: 128 P-----QPLFDTQ-VAAMVAGYGDQVGYDSLVASVVGAQIDKSHRFSDWAARPLSAAQIE 181
Query: 474 YAALDAVVLLQIFHHV 489
YAA D L +++ +
Sbjct: 182 YAAADVTYLREVYQRL 197
>gi|398334995|ref|ZP_10519700.1| ribonuclease III [Leptospira kmetyi serovar Malaysia str.
Bejo-Iso9]
Length = 366
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 27/161 (16%)
Query: 338 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGI 397
+ ID E Y +KV ++QI++ +I D +KL LD T + + I
Sbjct: 7 ISIDTESSGYY---TYFSKVCLIQISAKGKNYIIDPLKLQN-----LDGLGT-LFEDKKI 57
Query: 398 LKLGYNFQCDIKQLAHSYGELECFKHYEM--------LLDIQNVFKEPKGGLSGLAEKIL 449
LK+ ++ DIK L +G FK + LLD + L+ L +
Sbjct: 58 LKIFHSAIDDIKALKKDFG----FKFVNIADTGFSSRLLDHEQY------SLTYLVDYYH 107
Query: 450 GAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
L+K + SNWE+RPL ++QL+YAALD V L I+ ++
Sbjct: 108 KIKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLETIWEKMK 148
>gi|392959923|ref|ZP_10325400.1| DNA-directed DNA polymerase [Pelosinus fermentans DSM 17108]
gi|421053564|ref|ZP_15516540.1| DNA-directed DNA polymerase [Pelosinus fermentans B4]
gi|421062813|ref|ZP_15524884.1| DNA-directed DNA polymerase [Pelosinus fermentans B3]
gi|421064278|ref|ZP_15526168.1| DNA-directed DNA polymerase [Pelosinus fermentans A12]
gi|421071076|ref|ZP_15532199.1| DNA-directed DNA polymerase [Pelosinus fermentans A11]
gi|392439010|gb|EIW16774.1| DNA-directed DNA polymerase [Pelosinus fermentans B3]
gi|392441989|gb|EIW19602.1| DNA-directed DNA polymerase [Pelosinus fermentans B4]
gi|392447423|gb|EIW24664.1| DNA-directed DNA polymerase [Pelosinus fermentans A11]
gi|392455892|gb|EIW32663.1| DNA-directed DNA polymerase [Pelosinus fermentans DSM 17108]
gi|392461367|gb|EIW37569.1| DNA-directed DNA polymerase [Pelosinus fermentans A12]
Length = 574
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 91/178 (51%), Gaps = 16/178 (8%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKP-NYVKGCKMNKVSIMQIA-SDEMVFIFD 372
+I++VD +D + + I +E +++ ID E + +KG K+ ++QIA + V I D
Sbjct: 9 EILYVDNLDRIARYIPILEQAELLAIDTETTGLDPLKGAKL---RLLQIAMPNTPVLIID 65
Query: 373 LIKL--AEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDI 430
KL AE V L +L+ +K+ +N + D+K L + ++ ML ++
Sbjct: 66 FFKLNNAEKV------ILGNVLEKSNAVKIFHNAKFDLKFLHVNGIKISNNIFDTMLAEL 119
Query: 431 QNVFKEPKGG--LSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
+ K G L ++ K L L+KT + SNW LS+ QL+YAA+D +L I+
Sbjct: 120 VILSGLAKTGYSLQDVSVKYLKIELDKTNQKSNWTG-ALSRQQLKYAAMDVYILSGIY 176
>gi|289739467|gb|ADD18481.1| putative 3'-5' exonuclease [Glossina morsitans morsitans]
Length = 349
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 19/173 (10%)
Query: 331 HIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIAS-DEMVFIFDLIKLAEDVPDVLDSCLT 389
H KV+G DCEW G V+++Q+AS + +F L + D + L
Sbjct: 45 HCGDYKVLGFDCEW---ITIGRVRKPVALLQLASPNGFCGLFRLCHM-----DHIPESLK 96
Query: 390 RILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQ---NVFKEPKGGLSGLAE 446
+L I+K+G N D ++L YG + DI+ + + GL L+
Sbjct: 97 NLLADKEIIKVGVNPAEDARKLQGDYG-----IYVASTFDIRYLAAMIRCKPLGLEKLSR 151
Query: 447 KILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTD 497
+L K SNWE L +Q+EYAA DA ++IF H+ + +P +
Sbjct: 152 SLLNVDFVKPWYIARSNWEFDKLDDDQVEYAANDAFAGVEIFKHLANRLKPRN 204
>gi|387126864|ref|YP_006295469.1| ribonuclease D [Methylophaga sp. JAM1]
gi|386273926|gb|AFI83824.1| Ribonuclease D [Methylophaga sp. JAM1]
Length = 382
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEW---KPNYVKGCKMNKVSIMQIASDEMVFIFD 372
++++D L + I+ K + ID E+ K Y + C ++QIA+D+++ D
Sbjct: 3 VLYIDSDTALTQFCSEIQHSKWLAIDTEFLREKTYYPQLC------LIQIANDDIIACVD 56
Query: 373 LIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQN 432
I + + P L +L P I + + + D++ L L ++ L
Sbjct: 57 PIAIKDLTP------LLNLLYQPDITLVFHAARQDLELLYLLKNSLPP-NLFDTQLAATI 109
Query: 433 VFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
+ + G L ++ L L+K ++W QRPLS QLEYAA D L +++H + +
Sbjct: 110 LGDGDQIGYGNLVKQRLDVSLDKAHSRADWTQRPLSPEQLEYAADDVRYLCELYHQMSA 168
>gi|302657746|ref|XP_003020587.1| exosome complex exonuclease Rrp6, putative [Trichophyton verrucosum
HKI 0517]
gi|291184437|gb|EFE39969.1| exosome complex exonuclease Rrp6, putative [Trichophyton verrucosum
HKI 0517]
Length = 881
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 9/175 (5%)
Query: 317 IWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKL 376
I+V+ ++ +H + ++ K + +D E ++V V +MQI++ E +I D +K
Sbjct: 247 IFVETLEDVHAMLSQLKQAKEIAVDLEHHDSHVY---HGLVCLMQISTREQDWIVDTLKP 303
Query: 377 AEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE 436
D VL+ + P I+K+ + D+ L G L ++ + +
Sbjct: 304 WRDQLQVLNE----VFADPSIIKVLHGSSMDVIWLQRDLG-LYLVGLFDTF-HAASALQL 357
Query: 437 PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
PK L L + +G +K + ++W RPL L+YA D LL IF +R+
Sbjct: 358 PKKSLKFLLHEYVGFDADKQYQTADWRIRPLLAGMLDYARSDTHFLLYIFDRLRN 412
>gi|303286635|ref|XP_003062607.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456124|gb|EEH53426.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 720
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 440 GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
GLS +A +LG L+K+ R S+W RPL++ Q YAALDA VL+++ +R
Sbjct: 657 GLSHVARVVLGKPLDKSTRMSDWSARPLTERQRHYAALDAWVLVEVMRVLR 707
>gi|213586553|ref|ZP_03368379.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Typhi
str. E98-0664]
Length = 165
Score = 51.6 bits (122), Expect = 0.001, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 19/170 (11%)
Query: 321 EVDGLHKAICH-IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAED 379
E D ++C + C + +D E+ ++ ++Q+ V + D + +++
Sbjct: 3 ETDDALASLCEAVRACPAIALDTEFVRTRTY---YPQLGLIQLFDGANVALIDPLGISDW 59
Query: 380 VPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF----K 435
P L +L+ GI K + D++ +++GEL E L+D Q + +
Sbjct: 60 SP------LKAVLRDTGITKFLHAGSEDLEVFLNAFGELP-----EPLIDTQILAAFCGR 108
Query: 436 EPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
G + + E+ G L+K+ ++W RPLS+ Q EYAA D LL I
Sbjct: 109 PLSWGFASMVEEYTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPI 158
>gi|118395219|ref|XP_001029962.1| 3'-5' exonuclease family protein [Tetrahymena thermophila]
gi|89284244|gb|EAR82299.1| 3'-5' exonuclease family protein [Tetrahymena thermophila SB210]
Length = 1087
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 16/189 (8%)
Query: 317 IWVDEVDGL-HKAICHIEGCKVVGIDCE-WKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
I+VD+ + L K I + +++GID E W N K K++ + +Q+++ F+ D++
Sbjct: 875 IFVDKEEQLIEKVIPDLLQHQIIGIDLEYWTDN--KDQKLSFICTLQLSTLSSNFVIDIL 932
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF 434
L++ V L S I +SP +K+ + + D+K L F + +
Sbjct: 933 NLSKSVSVHLKS----IFESPKFVKVFHGGETDLKLLKKDLN----FNLVNIFDTAKAYL 984
Query: 435 KEPKGG----LSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
K+ KG LS L+++ L ++K + S+W RPL + L YA D+ + L +F ++
Sbjct: 985 KQNKGAGSVSLSSLSQQYLNYNVDKQYQTSDWRIRPLPKPMLNYAMYDSFITLILFFVMK 1044
Query: 491 SCSQPTDVS 499
S D+S
Sbjct: 1045 STISQEDLS 1053
>gi|238879034|gb|EEQ42672.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 786
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 20/201 (9%)
Query: 296 PEAGFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCE---WKPNYVKGC 352
P+A S + K+ IWVD V+ L K + ++ + +D E ++ Y C
Sbjct: 212 PDAILAKSDPIPPKDWSSTKAIWVDTVEELQKMVQELKKSTEIAVDLEHHDYRSYYGIVC 271
Query: 353 KMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLA 412
+MQI++ E +I D + L +D+ + L + P I+K+ + DI L
Sbjct: 272 ------LMQISNREQDWIIDTLALRDDL-----TVLNEVFADPDIVKVFHGAFMDIIWLQ 320
Query: 413 HSYG--ELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQN 470
G + F + P+ L+ L E +K + ++W RPLS
Sbjct: 321 RDLGLYVVSLFDTFHA----SRALGFPRFSLAYLLEVYAHFKTSKQYQLADWRIRPLSPP 376
Query: 471 QLEYAALDAVVLLQIFHHVRS 491
L YA D LL I+ +++
Sbjct: 377 MLAYARSDTHFLLFIYDQLKN 397
>gi|116747862|ref|YP_844549.1| 3'-5' exonuclease [Syntrophobacter fumaroxidans MPOB]
gi|116696926|gb|ABK16114.1| 3'-5' exonuclease [Syntrophobacter fumaroxidans MPOB]
Length = 295
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 82/175 (46%), Gaps = 17/175 (9%)
Query: 316 IIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIK 375
++ +++ L + + + + +D E Y ++V ++QI+S E +I D +
Sbjct: 4 VVVIEKPSELDALVRQLSTARHLAVDTESNSFY---AYFDRVCLIQISSPERDYIIDPLS 60
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQ---N 432
L +D+ S L R+ ++P I K+ + D+ L + F+ + L D
Sbjct: 61 L-KDL-----SVLGRLFENPRIEKVLHAASNDVLGLRRDFQ----FR-FNGLFDTAIACK 109
Query: 433 VFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
+ + GLS + E G LNK + +W +RPL +QL+YA LD L+ + H
Sbjct: 110 LLGYKQLGLSKILETHFGVSLNKRWQRYDWGKRPLVPDQLDYARLDTHYLIALRH 164
>gi|254476761|ref|ZP_05090147.1| 3'-5' exonuclease [Ruegeria sp. R11]
gi|214031004|gb|EEB71839.1| 3'-5' exonuclease [Ruegeria sp. R11]
Length = 204
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 25/162 (15%)
Query: 337 VVGIDCE---WKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQ 393
VV IDCE P+ + C I D I + K + P+ L R+L+
Sbjct: 19 VVAIDCETMGLNPHRDRLC-----VIQMSGGDGNAHIVQVAKGQTEAPN-----LCRMLE 68
Query: 394 SPGILKLGYNFQCDIKQLAHSYGELE----CFKHYEMLLDIQNVFKEPKGGLSGLAEKIL 449
P +LKL + + DI + H++G L C K L+ + + + GL L ++++
Sbjct: 69 DPNVLKLFHFGRFDIAAMYHAFGALAAPVYCTKIASRLV---RTYTD-RHGLKNLTQELI 124
Query: 450 GAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G ++K ++ S+W LS QL+YAA D + L H +R+
Sbjct: 125 GVDISKQQQMSDWGAAQLSDAQLDYAASDVLHL----HRLRA 162
>gi|417845412|ref|ZP_12491441.1| Ribonuclease D [Haemophilus haemolyticus M21639]
gi|341955248|gb|EGT81709.1| Ribonuclease D [Haemophilus haemolyticus M21639]
Length = 380
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 356 KVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY 415
K+ ++Q+ E V + D + + + P V +L +P +LK+ ++ D+ +
Sbjct: 48 KLGLIQLYDGERVSLIDPLAITDFSPFV------ALLSNPKVLKVLHSCSEDLLVFLQKF 101
Query: 416 GELECFKHYEMLLDIQNVFK----EPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQ 471
+L C ++D Q + + GL+ LA++ L ++K +NW +RPLS Q
Sbjct: 102 DQLPC-----PMIDTQIMARFLGLGTSAGLAKLAQQYLNIEIDKGATRTNWIKRPLSDIQ 156
Query: 472 LEYAALDAVVLLQIFH 487
L+YAA D LL ++H
Sbjct: 157 LQYAAGDVWYLLPLYH 172
>gi|195108811|ref|XP_001998986.1| GI24264 [Drosophila mojavensis]
gi|308191614|sp|B4K934.1|WRNXO_DROMO RecName: Full=Werner Syndrome-like exonuclease; AltName: Full=3'-5'
exonuclease
gi|193915580|gb|EDW14447.1| GI24264 [Drosophila mojavensis]
Length = 329
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 80/185 (43%), Gaps = 23/185 (12%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMV-FIFDLIKL 376
WVD+ H I + D EW ++ G K S++QI DE +++ L L
Sbjct: 123 WVDQ--QTHTEIVPM------AFDMEWPFSFQTGP--GKSSVIQICVDERCCYVYQLSNL 172
Query: 377 AEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQ---NV 433
+ + + L ++ P + G N + D ++LA + E+ E +D+ N
Sbjct: 173 KK-----IPAALVALINHPKVRLHGVNIKADFRKLARDFPEVAAEPLIEKCVDLGVWCNE 227
Query: 434 FKEPKG--GLSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
E G L LA I ++K++ R S W PL +NQL YAA+D + I+ +
Sbjct: 228 VCETGGRWSLERLANFIAKKAMDKSKKVRMSKWHVIPLDENQLMYAAIDVYIGQVIYREI 287
Query: 490 RSCSQ 494
Q
Sbjct: 288 EQREQ 292
>gi|88857337|ref|ZP_01131980.1| putative RNase D, processing tRNA precursors [Pseudoalteromonas
tunicata D2]
gi|88820534|gb|EAR30346.1| putative RNase D, processing tRNA precursors [Pseudoalteromonas
tunicata D2]
Length = 375
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 440 GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
G + + E+ LG ++K+ +NW QRPLS +QLEYAA D LL F +R+
Sbjct: 116 GFAIMVERFLGLTIDKSESRTNWLQRPLSASQLEYAAGDVFYLLPCFEKIRA 167
>gi|307197463|gb|EFN78697.1| Probable exonuclease mut-7-like protein [Harpegnathos saltator]
Length = 1058
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 61/104 (58%), Gaps = 4/104 (3%)
Query: 332 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRI 391
++G +VGID EWKP++V K ++++++Q+A++E V+I D+I L E + D+ +
Sbjct: 416 LKGINMVGIDSEWKPSFV--TKQSELALIQLATNENVYILDVITLNE-LHDLWSELGLTL 472
Query: 392 LQSPGILKLGYNFQCDIKQLAHSYGELECFK-HYEMLLDIQNVF 434
+ I+K+G+ D+ + + L K H + LD+ +++
Sbjct: 473 FGNQDIIKIGFGIAHDMTVIRKNLPALSSIKTHGQGYLDLMHLW 516
>gi|68248994|ref|YP_248106.1| ribonuclease D [Haemophilus influenzae 86-028NP]
gi|68057193|gb|AAX87446.1| ribonuclease D [Haemophilus influenzae 86-028NP]
Length = 380
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 19/164 (11%)
Query: 329 ICHIEGCK-VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSC 387
IC++ K V +D E+ K+ ++Q+ DE V + D + + + P V
Sbjct: 23 ICNLAQMKSAVALDTEF---MRVSTYFPKLGLIQLYDDERVSLIDPLAITDFSPFV---- 75
Query: 388 LTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFK----EPKGGLSG 443
+L +P +LK+ ++ D+ + +L ++D Q + + GL+
Sbjct: 76 --ALLSNPKVLKILHSCSEDLLVFLQEFDQLP-----RPMIDTQIMARFLGLGTSAGLAK 128
Query: 444 LAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
LA++ L ++K +NW +RPLS QL+YAA D LL ++H
Sbjct: 129 LAQQYLNIEIDKGATRTNWIKRPLSDIQLQYAAGDVWYLLPLYH 172
>gi|212721724|ref|NP_001131769.1| werner syndrome ATP-dependent helicase isoform 1 [Zea mays]
gi|194692488|gb|ACF80328.1| unknown [Zea mays]
gi|414588129|tpg|DAA38700.1| TPA: werner syndrome ATP-dependent helicase isoform 1 [Zea mays]
gi|414588130|tpg|DAA38701.1| TPA: werner syndrome ATP-dependent helicase isoform 2 [Zea mays]
Length = 303
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 11/158 (6%)
Query: 338 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGI 397
+G D EW+P +G KV++MQ+ E + L VP +L + +L+
Sbjct: 139 LGFDLEWRPFPRRGEPPCKVAVMQLCM-EKTLCYVLHIAHSGVPPILKT----LLEDSSS 193
Query: 398 LKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV-FKEPK-GGLSGLAEKILGAGLNK 455
+K+G D +++ + Y C + L + NV PK L+ L E I L K
Sbjct: 194 IKVGICIDNDARKMLNDYNV--CVQPLMDLSTLANVKLASPKRWSLASLTEMITCKELPK 251
Query: 456 TR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
R NWE LS+ QL+YAA DA + ++ +++
Sbjct: 252 PSNIRMGNWEADVLSKQQLQYAATDAYISWYLYEALQT 289
>gi|307186805|gb|EFN72228.1| Werner syndrome ATP-dependent helicase [Camponotus floridanus]
Length = 232
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 15/162 (9%)
Query: 338 VGIDCEWKPNYVKGCKMNKVSIMQIASD-EMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
+G D EW ++ G K +++QI D + ++ + L + L + +L P
Sbjct: 73 LGFDLEWPFSFQTG--SGKTALVQICPDVNVCYLLHIYSLNK-----LPAAFVELLCHPK 125
Query: 397 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDI-----QNVFKEPKGGLSGLAEKILGA 451
++ +G N + D+++L + E K + LD Q + + + L L +L
Sbjct: 126 VMLVGVNIKNDLRKLERDFKEFPAQKIVDNCLDCGPFANQRLLRSGRWSLERLTTLVLKK 185
Query: 452 GLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
++K R S W +PLS Q YAA DA V L I+ + +
Sbjct: 186 KIDKNPEVRRSKWHVQPLSDAQKIYAATDAYVSLLIYRELEN 227
>gi|255320255|ref|ZP_05361440.1| 3'-5' exonuclease [Acinetobacter radioresistens SK82]
gi|255302694|gb|EET81926.1| 3'-5' exonuclease [Acinetobacter radioresistens SK82]
Length = 218
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 25/166 (15%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
V+G D E KP + +G ++Q+A+ E VF+F L PD+L+ L IL +
Sbjct: 51 VLGFDSESKPTFRRGEISTGPHLIQLATAEKVFLFQL------NPDILN-FLKPILANQK 103
Query: 397 ILKLGYNFQCDIKQLAHSYGELE-------CFKHYEMLLDIQNVFKEPKGGLSGLAEKIL 449
+K+G+ + D+ EL+ CF + FK+P GL +
Sbjct: 104 QVKVGFGLKNDVHLFRKKGIELQSTVELSKCFSAFG--------FKQPI-GLKNAVALLF 154
Query: 450 GAGLNKTRR--NSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCS 493
K ++ S+W LS Q+ YAA D L +F +R S
Sbjct: 155 QQNFPKFKKISISDWSNMRLSSTQIGYAAADVYAALLVFQELRKRS 200
>gi|195443106|ref|XP_002069280.1| GK21051 [Drosophila willistoni]
gi|194165365|gb|EDW80266.1| GK21051 [Drosophila willistoni]
Length = 587
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 23/110 (20%)
Query: 398 LKLGYNFQCDIKQLAHSYG---ELECFKHYEMLLDIQNVFKE----------PKGGLSGL 444
L +G++ CD+ L S L+ HY LD++ V+ E P G ++ +
Sbjct: 442 LAIGFSITCDLAMLQRSLPLQLRLQTAHHY---LDLRTVWLELKKQKYGVELPFGNVNKV 498
Query: 445 AEKI-------LGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
E + LG LNK+ + SNW RPL + Q+ YAA+DA L+ +++
Sbjct: 499 GEALTDLTLLCLGKKLNKSNQCSNWANRPLRREQILYAAIDARCLMLVYN 548
>gi|194743270|ref|XP_001954123.1| GF18118 [Drosophila ananassae]
gi|190627160|gb|EDV42684.1| GF18118 [Drosophila ananassae]
Length = 340
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 15/160 (9%)
Query: 338 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMV-FIFDLIKLAEDVPDVLDSCLTRILQSPG 396
+ D EW ++ G K S++QI DE +I+ L L + L S L ++ P
Sbjct: 146 MAFDMEWPFSFQTGP--GKSSVIQICVDEKCCYIYQLTNLKK-----LPSALVALINHPK 198
Query: 397 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQ---NVFKEPKG--GLSGLAEKILGA 451
+ G N + D ++L + E+ E +D+ NV + G L LA I
Sbjct: 199 VRLHGVNIKADFRKLQRDFPEVSADALIEKCVDLGVWCNVICQTGGRWSLERLANFICRK 258
Query: 452 GLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
++K++ R S W PL +NQL YAA+D + I+ +
Sbjct: 259 AMDKSKKVRMSKWHVIPLDENQLMYAAIDVYIGQVIYRDL 298
>gi|425472218|ref|ZP_18851069.1| 3'-5' exonuclease domain protein [Microcystis aeruginosa PCC 9701]
gi|389881762|emb|CCI37724.1| 3'-5' exonuclease domain protein [Microcystis aeruginosa PCC 9701]
Length = 305
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 17/185 (9%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASD---EMVFIFDLI 374
++ E D + AI H ++ +D E K +++ + I+ ++D E V I D++
Sbjct: 3 YLTESDAIRNAIDHFSHFPILWLDTEVADYDSKTPRLSLIQILADSTDLTGERVTILDVL 62
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQN-- 432
D PD+ + +T+I+ I K+ +N D K L G K L++
Sbjct: 63 ----DRPDLTNYFITKIMLVDRIEKVFHNASYDCKFL----GGKGKVKKITCTLELAKKV 114
Query: 433 ---VFKEPKGGLSGLAEKILG-AGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHH 488
+ P L +AE + ++K+ + NW +RPL+ QLEYA D V QI H
Sbjct: 115 PYYIAPLPNYQLKTVAECLCHFPAIDKSEQGGNWGKRPLTAAQLEYAQKDPVYTAQIHHR 174
Query: 489 VRSCS 493
+ S
Sbjct: 175 LLQLS 179
>gi|358392254|gb|EHK41658.1| hypothetical protein TRIATDRAFT_287102 [Trichoderma atroviride IMI
206040]
Length = 614
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 32/208 (15%)
Query: 337 VVGIDCEWKPNYVK---GCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQ 393
V+G+D EW Y + G + N VS++QIAS + +F + D++ +I++
Sbjct: 212 VIGLDLEWM-AYARTADGPRRN-VSLIQIASPSRIALFHIAVFKYGA-DLVPPSFRKIME 268
Query: 394 SPGILKLGYNFQCD--------------IKQLAHSYGELECFKHYEMLLDIQNVFKEPKG 439
+P + K+G N D I +L+H Y ++ F H L+ V
Sbjct: 269 NPKVSKVGVNIGPDCTRLRNHLGVNVQGIFELSHLYRIVKHFPHERRLIHKTLV-----S 323
Query: 440 GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV---RSCSQPT 496
+ + +++L R NW +R L+ Q++YAA DA LQ+++ + R P
Sbjct: 324 LATQVQDQLLLPLYKGEVRTGNWMRR-LNPQQIDYAASDAYAGLQLYYVLEEKRKMLVPC 382
Query: 497 DVSEGHDKIEWKSYIVSHMDNPKKSKKR 524
H ++ +S D P+++KK+
Sbjct: 383 PPRPHHAELRLP---ISLPDTPEEAKKK 407
>gi|417840732|ref|ZP_12486840.1| Ribonuclease D [Haemophilus haemolyticus M19501]
gi|341950543|gb|EGT77130.1| Ribonuclease D [Haemophilus haemolyticus M19501]
Length = 382
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 67/136 (49%), Gaps = 15/136 (11%)
Query: 356 KVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY 415
K+ ++Q+ E V + D + + + P +L +P +LK+ ++ D+ +
Sbjct: 48 KLGLIQLYDGERVSLIDPLAITDFSP------FIALLANPKVLKVLHSCSEDLLVFLQEF 101
Query: 416 GELECFKHYEMLLDIQNVFK----EPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQ 471
+L C ++D Q + + GL+ LA++ L ++K +NW +RPLS Q
Sbjct: 102 DQLPC-----PMIDTQIMARFLGLGTSAGLAKLAQQYLNVEIDKGATRTNWIKRPLSDIQ 156
Query: 472 LEYAALDAVVLLQIFH 487
L+YAA D LL ++H
Sbjct: 157 LQYAAGDVWYLLPLYH 172
>gi|114326875|ref|YP_744031.1| ribonuclease D [Granulibacter bethesdensis CGDNIH1]
gi|114315049|gb|ABI61109.1| ribonuclease D [Granulibacter bethesdensis CGDNIH1]
Length = 429
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 77/167 (46%), Gaps = 12/167 (7%)
Query: 359 IMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGEL 418
++Q+ + V + D + P++ + + +L P ++K+ + + DI+ +G +
Sbjct: 86 VVQLGGADCVAVIDTL-----APELDLAPVGELLADPAVIKVFHACRQDIEIFLLRFGSI 140
Query: 419 ECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALD 478
+ + F + + G L + G ++K R S+W +RPLSQ Q++YAA D
Sbjct: 141 PQPMFDTQVAAMVAGFGD-QVGYDTLVSSLTGGHIDKAHRFSDWSRRPLSQAQIDYAAAD 199
Query: 479 AVVLLQIFHHVRSCSQPTDVSEGHDKIEWKSYIVSHMDNPKKSKKRP 525
L ++ +R D E ++ W S ++ +++P + P
Sbjct: 200 VTHLRGVYETLR------DRLEKEGRLAWVSEEMAVLNDPATYRTDP 240
>gi|456877521|gb|EMF92536.1| 3'-5' exonuclease [Leptospira santarosai str. ST188]
Length = 366
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 14/140 (10%)
Query: 354 MNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAH 413
+KV ++QI++ +I D +KL LD T + ++ ILK+ ++ DIK L
Sbjct: 20 FSKVCLIQISAKGKNYILDPLKLRN-----LDGLGT-LFENKKILKIFHSAIDDIKALKK 73
Query: 414 SYGELECFKHYEMLLDI---QNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQN 470
+G ++ + D + + L+ L + L+K + SNWE+RPL ++
Sbjct: 74 DFG-----FQFQNIADTGFSSRLLDHEQYSLTYLVDYYHKIKLSKKEQKSNWEKRPLEKS 128
Query: 471 QLEYAALDAVVLLQIFHHVR 490
QL+YAALD V L I+ ++
Sbjct: 129 QLQYAALDTVYLETIWEKMK 148
>gi|148227808|ref|NP_001081838.1| Werner syndrome ATP-dependent helicase homolog [Xenopus laevis]
gi|29428101|sp|O93530.1|WRN_XENLA RecName: Full=Werner syndrome ATP-dependent helicase homolog;
AltName: Full=Exonuclease WRN; AltName:
Full=Focus-forming activity 1; Short=FFA-1
gi|3420291|gb|AAC63512.1| focus forming activity 1 [Xenopus laevis]
Length = 1436
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 85/182 (46%), Gaps = 21/182 (11%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 395
V+G D EW P Y KG K KV+++Q+ S++ ++F + +A L R+L+
Sbjct: 72 VLGFDIEWPPVYTKG-KTGKVALIQVCVSEKKCYLFHISPMAG-----FPKGLKRLLEDE 125
Query: 396 GILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGL- 453
+ K+G + D +L Y +L+ F + + + KE K +GL + + L
Sbjct: 126 SVRKVGVGIEGDQWKLMSDYELKLKGFIELSEMANQKLRCKE-KWTFNGLIKHLFKEQLY 184
Query: 454 -NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSEGHDKIEWKSYIV 512
K+ R SNW+ L+++Q YAA DA L I+ + EG D E S+ V
Sbjct: 185 KRKSYRCSNWDIFLLTEDQKLYAATDAYAGLLIYKKL----------EGMDAHESDSFRV 234
Query: 513 SH 514
Sbjct: 235 GR 236
>gi|197116637|ref|YP_002137064.1| ribonuclease D [Geobacter bemidjiensis Bem]
gi|197085997|gb|ACH37268.1| ribonuclease D, putative [Geobacter bemidjiensis Bem]
Length = 377
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAE 446
L I +P I K+ + D++ L +G +E ++ ++ Q E + GL+ L +
Sbjct: 75 VLAPIFANPAIKKIFHGADYDMRSLYRDFG-IEVVNLFDTMIASQ-FLGESEFGLAALLK 132
Query: 447 KILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
K G L+K + ++W +RP SQ L+YA D +L++++ + +
Sbjct: 133 KRFGVELDKRYQKADWSKRPFSQEMLDYAMKDTSLLIELYRQLEA 177
>gi|119476222|ref|ZP_01616573.1| ribonuclease D [marine gamma proteobacterium HTCC2143]
gi|119450086|gb|EAW31321.1| ribonuclease D [marine gamma proteobacterium HTCC2143]
Length = 384
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 32/185 (17%)
Query: 317 IWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKV-SIMQIASDEMVFIFDLIK 375
+++D+ + L K + V+ +D E +++ + +++QI+ F+ D +
Sbjct: 14 VYIDDNETLRKFCLQWQHAAVLALDTE----FIRTDTFYPIGALLQISEGTGCFLIDPLS 69
Query: 376 LAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGE-LECFKHYEMLLDIQNVF 434
+ + P LT +L P I+K+ HS E LE F+ +L +
Sbjct: 70 IDDFSP------LTALLTDPAIVKV-----------LHSCSEDLEVFERLFQVLPQPLID 112
Query: 435 KEPKGGLSG---------LAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ GL G + E +L + K SNW QRPL+++Q+ YAALD L ++
Sbjct: 113 TQIAAGLDGYGFSLGYQKMTEALLQIHVAKGETRSNWLQRPLTESQIHYAALDVAYLPEM 172
Query: 486 FHHVR 490
+ ++
Sbjct: 173 YQQLK 177
>gi|342179228|sp|Q0BVP4.2|RND_GRABC RecName: Full=Ribonuclease D; Short=RNase D
Length = 395
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 77/167 (46%), Gaps = 12/167 (7%)
Query: 359 IMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGEL 418
++Q+ + V + D + P++ + + +L P ++K+ + + DI+ +G +
Sbjct: 52 VVQLGGADCVAVIDTL-----APELDLAPVGELLADPAVIKVFHACRQDIEIFLLRFGSI 106
Query: 419 ECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALD 478
+ + F + + G L + G ++K R S+W +RPLSQ Q++YAA D
Sbjct: 107 PQPMFDTQVAAMVAGFGD-QVGYDTLVSSLTGGHIDKAHRFSDWSRRPLSQAQIDYAAAD 165
Query: 479 AVVLLQIFHHVRSCSQPTDVSEGHDKIEWKSYIVSHMDNPKKSKKRP 525
L ++ +R D E ++ W S ++ +++P + P
Sbjct: 166 VTHLRGVYETLR------DRLEKEGRLAWVSEEMAVLNDPATYRTDP 206
>gi|358373052|dbj|GAA89652.1| 3'-5' exonuclease/helicase (Wrn) [Aspergillus kawachii IFO 4308]
Length = 308
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 81/168 (48%), Gaps = 22/168 (13%)
Query: 336 KVVGIDCEWKPNYVKGCKM-NKVSIMQIASDEMVFIFD--LIKLAEDVPDVLDSCLTRIL 392
K++G D EWK + + VS++Q+A+ E + +F L + + D++ L +I+
Sbjct: 100 KILGFDMEWKAQASAWNSIQDNVSLIQVANRERIALFHVALFRPGRKLSDLVPPSLKQII 159
Query: 393 QSPGILKLGYNFQCDIKQL-------AHSYGELECFKHYEMLL-----DIQNVFKEPKGG 440
+SP I KLG + + D +L AH EL H L+ + + + K P
Sbjct: 160 ESPDITKLGVSIKADCTRLRKYLKIDAHGIFEL---SHLHKLVKYCQSNPKLINKRP-VN 215
Query: 441 LSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
LS E+ LG L K R S+W LS Q++YAA D+ + +F
Sbjct: 216 LSEQVEEHLGLPLEKAEDVRCSDWTVS-LSYRQVQYAASDSYACICLF 262
>gi|118404126|ref|NP_001016454.2| exonuclease 3'-5' domain containing 2 [Xenopus (Silurana)
tropicalis]
gi|116284125|gb|AAI24062.1| hypothetical protein LOC549208 [Xenopus (Silurana) tropicalis]
Length = 612
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 74/164 (45%), Gaps = 21/164 (12%)
Query: 337 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 396
V+G+DCEW V G K VS++Q+AS + + + L +L +
Sbjct: 110 VLGMDCEWVS--VDG-KAGPVSLLQMASYSGFCVLVRLPQLTSSGCTIPKTLLELLANNS 166
Query: 397 ILKLGYNFQCDIKQLAHSYG---------ELECFKHYEMLLDIQNVFKEPKGGLSGLAEK 447
+LK+G D +L + YG +H +L QN L L+E
Sbjct: 167 VLKVGVGCWEDSSKLFNDYGLSVKGCVDIRYLAMRHRRDIL--QNTL-----SLKSLSET 219
Query: 448 ILGAGLNKT--RRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
IL L+K+ R SNW+ +Q+Q+ YAA DA V + +F H+
Sbjct: 220 ILSFPLDKSFQLRCSNWDAEEFTQDQVLYAARDAQVSVALFLHL 263
>gi|253698875|ref|YP_003020064.1| 3'-5' exonuclease [Geobacter sp. M21]
gi|251773725|gb|ACT16306.1| 3'-5' exonuclease [Geobacter sp. M21]
Length = 377
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
Query: 387 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAE 446
L I +P I K+ + D++ L +G +E ++ ++ Q E + GL+ L +
Sbjct: 75 VLAPIFANPAIKKIFHGADYDMRSLYRDFG-IEVVNLFDTMIASQ-FLGESEFGLAALLK 132
Query: 447 KILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
K G L+K + ++W +RP SQ L+YA D +L++++ + +
Sbjct: 133 KRFGVELDKRYQKADWSKRPFSQEMLDYAMKDTSLLIELYRQLEA 177
>gi|393236103|gb|EJD43654.1| hypothetical protein AURDEDRAFT_114687 [Auricularia delicata
TFB-10046 SS5]
Length = 485
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 338 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGI 397
+G D EW+PNY G N+ +++Q+A + V + + + L R+L++P I
Sbjct: 62 LGFDIEWRPNYRAGMPDNRTALIQLAGRDFVLLAHVAAMHS-----FPEELRRVLEAPEI 116
Query: 398 LKLGYNFQCDIKQL 411
+K+G Q D ++L
Sbjct: 117 MKVGVGIQADAQKL 130
>gi|104783019|ref|YP_609517.1| ribonuclease D, processes tRNA [Pseudomonas entomophila L48]
gi|95112006|emb|CAK16733.1| ribonuclease D, processes tRNA [Pseudomonas entomophila L48]
Length = 377
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 21/143 (14%)
Query: 356 KVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY 415
K ++QI F+ D + +++ P L +L G++K+ + D++ L
Sbjct: 42 KAGLVQIGDGNQAFLIDPLLISDWQP------LADLLDDSGVVKVLHACSEDLEVLLRLT 95
Query: 416 GELECFKHYEMLLDIQ------NV-FKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLS 468
G+L + L D Q N+ F G S L +++LG L K S+W QRPLS
Sbjct: 96 GKLP-----QPLFDTQLAAGYLNIGFSM---GYSRLVQEVLGLELPKGETRSDWLQRPLS 147
Query: 469 QNQLEYAALDAVVLLQIFHHVRS 491
+ Q+ YAA DAV L ++F +R
Sbjct: 148 ETQVSYAAEDAVHLAELFSALRP 170
>gi|296815198|ref|XP_002847936.1| exosome component 3'-5' exonuclease [Arthroderma otae CBS 113480]
gi|238840961|gb|EEQ30623.1| ribosomal RNA processing 3'-5' exonuclease [Arthroderma otae CBS
113480]
Length = 810
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 21/180 (11%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCEWKPNYV-KGCKMNKVSIMQIASDEMVFIFDLIKL 376
+V+ ++ +H + ++ K + +D E +V G V +MQI++ E +I D +K
Sbjct: 248 FVETMEDVHAMLAELKKAKEIAVDLEHHDAHVYHGL----VCLMQISTREQDWIVDTLKP 303
Query: 377 AEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGE-----LECFKHYEMLLDIQ 431
D VL+ + P I+K+ + D+ L G + F ML
Sbjct: 304 WRDQLQVLNE----VFADPSIVKVLHGSSMDVIWLQRDLGLYLVGLFDTFHAASML---- 355
Query: 432 NVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
+ PK L L ++ +G +K + ++W RPL L+YA D LL IF +R+
Sbjct: 356 ---QLPKKSLKFLLQQYVGFDADKQYQTADWRIRPLLPGMLDYARSDTHFLLYIFDRLRN 412
>gi|195108841|ref|XP_001999001.1| GI24274 [Drosophila mojavensis]
gi|193915595|gb|EDW14462.1| GI24274 [Drosophila mojavensis]
Length = 901
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 83/184 (45%), Gaps = 28/184 (15%)
Query: 315 DIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
+++ VD VD L +A+ + + ID E ++ M ++Q+++ +IFD +
Sbjct: 276 ELMLVDSVDALQQALTELRKASQIAIDVE---HHSYRTFMGITCLVQMSTRTKDYIFDTL 332
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVF 434
KL E++ L +L P +LK+ + DI+ L ++ L I N+F
Sbjct: 333 KLREEM-----HILNLVLTDPKVLKILHGADLDIEWL-----------QRDLSLYIVNMF 376
Query: 435 KEPKGG---------LSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQI 485
+ L+ L + L ++K+ + ++W RPL Q ++YA D L+ I
Sbjct: 377 DTHRAAKALNMARLSLAFLLKHYLDLDVDKSLQLADWRMRPLPQKLIDYARQDTHYLIYI 436
Query: 486 FHHV 489
+ +
Sbjct: 437 YERL 440
>gi|395786188|ref|ZP_10465915.1| ribonuclease D [Bartonella tamiae Th239]
gi|423716919|ref|ZP_17691109.1| ribonuclease D [Bartonella tamiae Th307]
gi|395422486|gb|EJF88682.1| ribonuclease D [Bartonella tamiae Th239]
gi|395428993|gb|EJF95068.1| ribonuclease D [Bartonella tamiae Th307]
Length = 386
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 29/179 (16%)
Query: 319 VDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKM-NKVSIMQIASDEMVFIFDLIKLA 377
+ + D L+ AI + + V +D E +++ ++ ++QI+SDE+ + D L+
Sbjct: 4 ITQTDDLNTAIAILRQSQFVTVDTE----FIRETTFWPELCLIQISSDELSVLID--PLS 57
Query: 378 EDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEP 437
E++ L S T ++ ++K+ ++ + DI+ + G + L D Q
Sbjct: 58 ENID--LSSFFT-LISDTQVVKVFHSARQDIEIIYKMAGLIPT-----PLFDTQIA---- 105
Query: 438 KGGLSGLAE---------KILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
+ G E +I G ++KT R ++W RPLS+NQL YA D L Q++
Sbjct: 106 -AAICGYGETISYDQIVNRITGDTIDKTSRFTDWSARPLSENQLSYALADVTYLRQVYR 163
>gi|317139033|ref|XP_003189119.1| 3-5 exonuclease [Aspergillus oryzae RIB40]
Length = 340
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 26/170 (15%)
Query: 337 VVGIDCEWKPNYVKGCKMNK-VSIMQIASDEMVFIFD--LIKLAEDVPDVLDSCLTRILQ 393
++G+D EWK N + K VS++Q+AS + +F + + A D++ L RIL+
Sbjct: 121 ILGLDIEWKANASAADGILKNVSLIQLASSRRIALFHIAMFRPARGAEDLVPPTLKRILE 180
Query: 394 SPGILKLGYNFQCD--------------IKQLAHSYGELECFKHYEMLLDIQNVFKEPKG 439
SP ++K G + + D I +L+H Y ++ + L++ + V
Sbjct: 181 SPDVIKAGVSIKADCTRLRKYLGIETRGIFELSHLYKLVKYSQSNPGLVNKRTV------ 234
Query: 440 GLSGLAEKILGAGLNKT--RRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 487
LS E+ G L K R S+W L +Q+ YAA D + +F+
Sbjct: 235 NLSAQVEEHFGIPLAKDVEVRCSDWASA-LDYSQVHYAAADPFACVCLFN 283
>gi|156844457|ref|XP_001645291.1| hypothetical protein Kpol_1037p29 [Vanderwaltozyma polyspora DSM
70294]
gi|156115951|gb|EDO17433.1| hypothetical protein Kpol_1037p29 [Vanderwaltozyma polyspora DSM
70294]
Length = 746
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 20/179 (11%)
Query: 318 WVDEVDGLHKAICHIEGCKVVGIDCE---WKPNYVKGCKMNKVSIMQIASDEMVFIFDLI 374
WVD + L + ++ C + +D E ++ Y C +MQI++ + F+ D +
Sbjct: 214 WVDTSEALQSMLDKLKECTEIAVDLEHHDYRSYYGIVC------LMQISTRKEDFLVDTL 267
Query: 375 KLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYG--ELECFKHYEMLLDIQN 432
L +++ L + P ILK+ + DI L G + F Y
Sbjct: 268 ALRDEL-----HILNEVFADPNILKVLHGAFMDIIWLQRDLGLYVVSLFDTYHA----SR 318
Query: 433 VFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
P+ L+ L EK +K + ++W RPLS+ YA D LL I+ +R+
Sbjct: 319 ALGFPRHSLAYLLEKYANFKTSKKYQLADWRVRPLSKPMHAYARADTHFLLNIYDQIRN 377
>gi|6324574|ref|NP_014643.1| Rrp6p [Saccharomyces cerevisiae S288c]
gi|14195186|sp|Q12149.1|RRP6_YEAST RecName: Full=Exosome complex exonuclease RRP6; AltName:
Full=Ribosomal RNA-processing protein 6
gi|1150996|gb|AAC49480.1| hypothetical protein UNC733 [Saccharomyces cerevisiae]
gi|1420088|emb|CAA99189.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285814890|tpg|DAA10783.1| TPA: Rrp6p [Saccharomyces cerevisiae S288c]
Length = 733
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 76/180 (42%), Gaps = 20/180 (11%)
Query: 317 IWVDEVDGLHKAICHIEGCKVVGIDCE---WKPNYVKGCKMNKVSIMQIASDEMVFIFDL 373
IWVD L + ++ K + +D E ++ Y C +MQI++ E ++ D
Sbjct: 214 IWVDTSTELESMLEDLKNTKEIAVDLEHHDYRSYYGIVC------LMQISTRERDYLVDT 267
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYG--ELECFKHYEMLLDIQ 431
+KL E++ L + +P I+K+ + DI L G + F Y
Sbjct: 268 LKLRENL-----HILNEVFTNPSIVKVFHGAFMDIIWLQRDLGLYVVGLFDTYHA----S 318
Query: 432 NVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
P+ L+ L E +K + ++W RPLS+ YA D LL I+ +R+
Sbjct: 319 KAIGLPRHSLAYLLENFANFKTSKKYQLADWRIRPLSKPMTAYARADTHFLLNIYDQLRN 378
>gi|451999862|gb|EMD92324.1| hypothetical protein COCHEDRAFT_1193826 [Cochliobolus
heterostrophus C5]
Length = 631
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 83/165 (50%), Gaps = 19/165 (11%)
Query: 337 VVGIDCEWKPNY-VKGCKMNKVSIMQIASDEMVFIFDL-IKLAEDVPDVLDSCLTRILQS 394
++G D EW Y V+ NK+ ++Q+AS++ + + + + + D++ L +I++
Sbjct: 90 ILGFDMEWPWGYWVEDTLQNKIGLIQVASEDKIGLIHIGLHPGKTSRDIIAPSLKKIIED 149
Query: 395 PGILKLGYN-FQCDIKQLAHSYGELEC-----FKHYEMLLDIQNVFKEPK---GGLSGLA 445
P I K+G N + D +L+ +G L+ H L+ + P+ L LA
Sbjct: 150 PNIGKVGVNILKADFSRLSQYFG-LQPKGAIELSHLNRLVKFGP--RRPEYVTVKLVSLA 206
Query: 446 EKI---LGAGLNKTR-RNSNWEQRPLSQNQLEYAALDAVVLLQIF 486
+++ LG L K R S+W +PLS+ Q++YAA DA ++
Sbjct: 207 QQVEEQLGLPLYKGDVRTSDW-SKPLSEEQIDYAAGDAYAGFMLY 250
>gi|117920828|ref|YP_870020.1| ribonuclease D [Shewanella sp. ANA-3]
gi|342179224|sp|A0KXU5.1|RND_SHESA RecName: Full=Ribonuclease D; Short=RNase D
gi|117613160|gb|ABK48614.1| ribonuclease D [Shewanella sp. ANA-3]
Length = 388
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 73/152 (48%), Gaps = 13/152 (8%)
Query: 356 KVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY 415
K+ ++Q + + + D + L PD+ S +L +P I+KL ++ D++ AH Y
Sbjct: 60 KLGLIQAYDGKTLALIDPVAL----PDL--SAFWSLLDNPNIIKLVHSCSEDLEVFAH-Y 112
Query: 416 GELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYA 475
G+ + ++ + G + L E LG ++K ++W +RPL++ QL YA
Sbjct: 113 GQRQPTPLFDSQIAASLCGMGHGLGYAKLVETCLGEVIDKGESRTDWMRRPLTEAQLSYA 172
Query: 476 ALDAVVLLQIFHHVRSCSQPTDVSEGHDKIEW 507
A D + L Q++ Q D + D++ W
Sbjct: 173 ANDVLYLYQLY------PQLADKLKAQDRLGW 198
>gi|449432388|ref|XP_004133981.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus]
Length = 314
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 24/181 (13%)
Query: 321 EVDGLHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIA-SDEMVFIFDLIKLAED 379
+++ KA+ I +G D EW+P++ +G K ++MQ+ + + +I
Sbjct: 136 KINSTRKAMDQI----TIGFDIEWRPSFKRGVPPGKAAVMQLCLENSECHVMHIIH--SG 189
Query: 380 VPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQN--VFKEP 437
+P L + +L+ + K G D ++ Y K + D+ N + P
Sbjct: 190 IPQSLQA----LLEDDTLSKAGVGIASDASKVFKEYN--VSVKPLNEISDLANQKLAGVP 243
Query: 438 KG-GLSGLAEKILGAGLNKTRRN--SNWEQRPLSQNQLEYAALDAVV------LLQIFHH 488
K GL L E ++ L K R NWE LS++QL+YAA DA +L+ F H
Sbjct: 244 KKWGLRALTETLISKELQKPDRIRLGNWEVAVLSKDQLQYAATDAFASWYLHEILKGFPH 303
Query: 489 V 489
V
Sbjct: 304 V 304
>gi|392296333|gb|EIW07435.1| Rrp6p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 733
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 76/180 (42%), Gaps = 20/180 (11%)
Query: 317 IWVDEVDGLHKAICHIEGCKVVGIDCE---WKPNYVKGCKMNKVSIMQIASDEMVFIFDL 373
IWVD L + ++ K + +D E ++ Y C +MQI++ E ++ D
Sbjct: 214 IWVDTSTELESMLEDLKNTKEIAVDLEHHDYRSYYGIVC------LMQISTRERDYLVDT 267
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYG--ELECFKHYEMLLDIQ 431
+KL E++ L + +P I+K+ + DI L G + F Y
Sbjct: 268 LKLRENL-----HILNEVFTNPSIVKVFHGAFMDIIWLQRDLGLYVVGLFDTYHA----S 318
Query: 432 NVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
P+ L+ L E +K + ++W RPLS+ YA D LL I+ +R+
Sbjct: 319 KAIGLPRHSLAYLLENFANFKTSKKYQLADWRIRPLSKPMTAYARADTHFLLNIYDQLRN 378
>gi|344234698|gb|EGV66566.1| hypothetical protein CANTEDRAFT_128954 [Candida tenuis ATCC 10573]
Length = 737
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 22/181 (12%)
Query: 317 IWVDEVDGLHKAICHIEGCKVVGIDCE---WKPNYVKGCKMNKVSIMQIASDEMVFIFDL 373
IW+D+ + + + + + + +D E ++ Y C +MQI++ + +I D
Sbjct: 212 IWIDQPEQIDELVNELSNSSEIAVDLEHHDYRTYYGLVC------LMQISTRKKDWIIDT 265
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV 433
+ L +D+ L + +P I+K+ + DI L G + L D +
Sbjct: 266 LALRDDL-----QKLNVVFTNPQIVKVFHGAFMDIIWLQRDLG-----LYIVSLFDTYHA 315
Query: 434 FKE---PKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 490
K+ PK L+ L E +K + ++W RPLS + L YA D LL IF H++
Sbjct: 316 SKKLGFPKFSLAYLLETFAKFKTSKKYQLADWRIRPLSTSMLAYARSDTHFLLNIFDHLK 375
Query: 491 S 491
+
Sbjct: 376 N 376
>gi|325277926|ref|ZP_08143467.1| ribonuclease D [Pseudomonas sp. TJI-51]
gi|324096941|gb|EGB95246.1| ribonuclease D [Pseudomonas sp. TJI-51]
Length = 377
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 15/140 (10%)
Query: 356 KVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY 415
K ++QI + F+ D + + P L +L++ G++K+ + D++ L
Sbjct: 42 KAGLIQIGDGQRAFLIDPLLIGNWQP------LAELLENSGVVKVLHACSEDLEVLLRLT 95
Query: 416 GELECFKHYEMLLDIQNVFKEPKGGLS----GLAEKILGAGLNKTRRNSNWEQRPLSQNQ 471
G+L + L D Q G S L +++LG L K S+W QRPLS Q
Sbjct: 96 GKLP-----QPLFDTQLAAGYLNLGFSMGYSRLVQEVLGIDLPKGETRSDWLQRPLSDTQ 150
Query: 472 LEYAALDAVVLLQIFHHVRS 491
+ YAA DAV L ++F +R
Sbjct: 151 VSYAAEDAVHLAELFTVLRP 170
>gi|151945630|gb|EDN63871.1| ribosomal RNA processing protein [Saccharomyces cerevisiae YJM789]
gi|190407342|gb|EDV10609.1| exosome complex exonuclease RRP6 [Saccharomyces cerevisiae RM11-1a]
gi|207341289|gb|EDZ69386.1| YOR001Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256274006|gb|EEU08922.1| Rrp6p [Saccharomyces cerevisiae JAY291]
gi|259149485|emb|CAY86289.1| Rrp6p [Saccharomyces cerevisiae EC1118]
Length = 733
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 76/180 (42%), Gaps = 20/180 (11%)
Query: 317 IWVDEVDGLHKAICHIEGCKVVGIDCE---WKPNYVKGCKMNKVSIMQIASDEMVFIFDL 373
IWVD L + ++ K + +D E ++ Y C +MQI++ E ++ D
Sbjct: 214 IWVDTSTELESMLEDLKNTKEIAVDLEHHDYRSYYGIVC------LMQISTRERDYLVDT 267
Query: 374 IKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYG--ELECFKHYEMLLDIQ 431
+KL E++ L + +P I+K+ + DI L G + F Y
Sbjct: 268 LKLRENL-----HILNEVFTNPSIVKVFHGAFMDIIWLQRDLGLYVVGLFDTYHA----S 318
Query: 432 NVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 491
P+ L+ L E +K + ++W RPLS+ YA D LL I+ +R+
Sbjct: 319 KAIGLPRHSLAYLLENFANFKTSKKYQLADWRIRPLSKPMTAYARADTHFLLNIYDQLRN 378
>gi|114047748|ref|YP_738298.1| ribonuclease D [Shewanella sp. MR-7]
gi|113889190|gb|ABI43241.1| ribonuclease D [Shewanella sp. MR-7]
Length = 384
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 73/152 (48%), Gaps = 13/152 (8%)
Query: 356 KVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY 415
K+ ++Q + + + D + L PD+ S +L +P I+KL ++ D++ AH Y
Sbjct: 56 KLGLIQAYDGKTLALIDPVAL----PDL--SAFWSLLDNPNIIKLVHSCSEDLEVFAH-Y 108
Query: 416 GELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYA 475
G+ + ++ + G + L E LG ++K ++W +RPL++ QL YA
Sbjct: 109 GQRQPTPLFDSQIAASLCGMGHGLGYAKLVETCLGEVIDKGESRTDWMRRPLTEAQLSYA 168
Query: 476 ALDAVVLLQIFHHVRSCSQPTDVSEGHDKIEW 507
A D + L Q++ Q D + D++ W
Sbjct: 169 ANDVLYLYQLY------PQLADKLKAQDRLGW 194
>gi|217972253|ref|YP_002357004.1| 3'-5' exonuclease [Shewanella baltica OS223]
gi|217497388|gb|ACK45581.1| 3'-5' exonuclease [Shewanella baltica OS223]
Length = 320
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 73/148 (49%), Gaps = 9/148 (6%)
Query: 329 ICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCL 388
+ ++ +V+G D E + ++ +G + + +S++QIA+ + ++F L E + L
Sbjct: 129 VARLQAEQVLGFDTETRASFERGVQ-HPLSLIQIATADACYLFQHAILGEQF-----TQL 182
Query: 389 TRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKI 448
+L+ ILK+G + D + L +G + ++ + + E + G L +
Sbjct: 183 KTVLEDENILKVGVGLRSDAQALKRQWG-INVTSKLDLNWALAQLGAEKEMGTRQLVATL 241
Query: 449 LGAGLNKTRRN--SNWEQRPLSQNQLEY 474
L ++K ++ SNW+ PLS Q++Y
Sbjct: 242 LSTRIDKPKKITLSNWQHVPLSGAQIDY 269
>gi|308191629|sp|B3LWP6.2|WRNXO_DROAN RecName: Full=Werner Syndrome-like exonuclease; AltName: Full=3'-5'
exonuclease
Length = 355
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 15/160 (9%)
Query: 338 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMV-FIFDLIKLAEDVPDVLDSCLTRILQSPG 396
+ D EW ++ G K S++QI DE +I+ L L + L S L ++ P
Sbjct: 161 MAFDMEWPFSFQTGP--GKSSVIQICVDEKCCYIYQLTNLKK-----LPSALVALINHPK 213
Query: 397 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQ---NVFKEPKG--GLSGLAEKILGA 451
+ G N + D ++L + E+ E +D+ NV + G L LA I
Sbjct: 214 VRLHGVNIKADFRKLQRDFPEVSADALIEKCVDLGVWCNVICQTGGRWSLERLANFICRK 273
Query: 452 GLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 489
++K++ R S W PL +NQL YAA+D + I+ +
Sbjct: 274 AMDKSKKVRMSKWHVIPLDENQLMYAAIDVYIGQVIYRDL 313
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,192,926,955
Number of Sequences: 23463169
Number of extensions: 330608876
Number of successful extensions: 737003
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1436
Number of HSP's successfully gapped in prelim test: 1660
Number of HSP's that attempted gapping in prelim test: 733920
Number of HSP's gapped (non-prelim): 3307
length of query: 538
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 390
effective length of database: 8,886,646,355
effective search space: 3465792078450
effective search space used: 3465792078450
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)