Query 009286
Match_columns 538
No_of_seqs 274 out of 2240
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 23:04:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009286.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009286hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vte_A Tetrahydrocannabinolic 100.0 6.1E-90 2.1E-94 740.7 48.1 499 28-530 2-515 (518)
2 3fw9_A Reticuline oxidase; BI- 100.0 3.9E-86 1.3E-90 709.6 47.7 486 32-528 1-494 (495)
3 3tsh_A Pollen allergen PHL P 4 100.0 1E-81 3.5E-86 681.0 44.5 493 26-531 4-499 (500)
4 3rja_A Carbohydrate oxidase; p 100.0 1.2E-75 4.1E-80 627.2 40.5 457 32-529 2-473 (473)
5 3pop_A GILR oxidase; FAD bindi 100.0 1.4E-72 4.6E-77 606.1 41.8 452 46-527 8-501 (501)
6 2wdx_A Putative hexose oxidase 100.0 2.4E-68 8.4E-73 577.3 43.3 457 33-527 23-523 (523)
7 2ipi_A Aclacinomycin oxidoredu 100.0 8.4E-68 2.9E-72 573.3 45.8 461 30-528 18-520 (521)
8 2y3s_A TAML; oxidoreductase; H 100.0 8.8E-67 3E-71 565.5 43.8 451 47-528 33-528 (530)
9 1zr6_A Glucooligosaccharide ox 100.0 3.1E-67 1.1E-71 566.9 39.8 459 29-529 5-480 (503)
10 2bvf_A 6-hydroxy-D-nicotine ox 100.0 1.6E-64 5.5E-69 541.1 35.6 435 47-527 13-456 (459)
11 1w1o_A Cytokinin dehydrogenase 100.0 1.7E-40 5.9E-45 361.3 33.2 222 29-266 30-262 (534)
12 4bby_A Alkyldihydroxyacetoneph 100.0 5.6E-36 1.9E-40 332.6 30.7 202 71-273 198-408 (658)
13 2exr_A Cytokinin dehydrogenase 100.0 9.9E-35 3.4E-39 314.5 32.2 199 70-273 53-262 (524)
14 3pm9_A Putative oxidoreductase 100.0 1.3E-34 4.4E-39 309.5 30.0 204 70-275 43-253 (476)
15 4feh_A Oxidoreductase DPRE1; a 100.0 2.1E-32 7E-37 292.6 29.9 179 70-253 35-218 (481)
16 2vfr_A Xylitol oxidase, aldito 100.0 2.7E-31 9.3E-36 281.0 27.7 176 70-256 12-190 (422)
17 2uuu_A Alkyldihydroxyacetoneph 100.0 1.3E-31 4.6E-36 292.4 18.7 196 76-274 135-339 (584)
18 1wvf_A 4-cresol dehydrogenase 100.0 9.7E-30 3.3E-34 275.8 21.8 198 76-277 54-268 (520)
19 2i0k_A Oxidoreductase; MIX alp 100.0 2.7E-29 9.2E-34 273.9 15.3 198 48-256 10-228 (561)
20 1e8g_A Vanillyl-alcohol oxidas 100.0 4.3E-28 1.5E-32 264.7 23.9 201 75-277 67-300 (560)
21 3js8_A Cholesterol oxidase; ch 100.0 1.1E-28 3.9E-33 263.8 16.4 179 70-253 21-221 (540)
22 1f0x_A DLDH, D-lactate dehydro 100.0 1.7E-28 5.9E-33 266.2 15.0 194 76-274 43-297 (571)
23 3tx1_A UDP-N-acetylenolpyruvoy 99.9 6.8E-25 2.3E-29 222.1 12.1 164 75-251 51-217 (322)
24 3i99_A UDP-N-acetylenolpyruvoy 99.9 1.2E-24 4.2E-29 222.4 11.8 165 75-251 27-199 (357)
25 1hsk_A UDP-N-acetylenolpyruvoy 99.9 3.3E-24 1.1E-28 218.4 10.0 160 75-249 45-209 (326)
26 1uxy_A MURB, uridine diphospho 99.9 3E-23 1E-27 211.6 15.3 164 76-251 12-183 (340)
27 2gqt_A UDP-N-acetylenolpyruvyl 99.9 3E-22 1E-26 197.2 11.2 151 78-250 22-173 (268)
28 2yvs_A Glycolate oxidase subun 99.8 3.7E-19 1.3E-23 170.3 9.5 117 136-260 1-125 (219)
29 1ffv_C CUTM, flavoprotein of c 98.2 4.1E-06 1.4E-10 83.2 9.2 158 78-249 4-177 (287)
30 1n62_C Carbon monoxide dehydro 97.4 0.00023 7.8E-09 70.6 7.2 157 78-248 4-176 (288)
31 2w3s_A Xanthine dehydrogenase; 97.2 0.00032 1.1E-08 74.0 5.5 151 81-248 179-345 (462)
32 3nvz_B Xanthine dehydrogenase/ 96.4 0.0045 1.5E-07 61.7 6.7 156 78-247 9-189 (305)
33 1t3q_C Quinoline 2-oxidoreduct 94.0 0.093 3.2E-06 51.6 7.1 153 77-247 3-174 (288)
34 3hrd_C Nicotinate dehydrogenas 92.8 0.13 4.5E-06 50.8 6.1 78 78-158 2-82 (296)
35 1wvf_A 4-cresol dehydrogenase 89.4 0.37 1.3E-05 51.4 5.8 77 426-523 432-511 (520)
36 1rm6_B 4-hydroxybenzoyl-COA re 88.0 0.44 1.5E-05 47.6 4.8 76 78-159 5-84 (324)
37 3unc_A Xanthine dehydrogenase/ 74.4 2.7 9.4E-05 49.8 5.4 80 78-161 232-313 (1332)
38 1e8g_A Vanillyl-alcohol oxidas 57.8 13 0.00046 39.7 6.3 31 501-531 523-554 (560)
39 2uuu_A Alkyldihydroxyacetoneph 56.7 12 0.0004 40.4 5.6 28 494-521 552-580 (584)
40 2i0k_A Oxidoreductase; MIX alp 41.9 9.9 0.00034 40.7 2.1 23 501-523 533-555 (561)
41 1f0x_A DLDH, D-lactate dehydro 39.9 14 0.00047 39.7 2.8 28 499-527 535-562 (571)
42 1rzw_A Protein AF2095(GR4); be 37.1 42 0.0014 28.1 4.8 37 77-113 47-84 (123)
43 3zyv_A AOH1; oxidoreductase, m 35.8 24 0.00082 41.9 4.2 76 81-162 242-321 (1335)
44 3p04_A Uncharacterized BCR; SE 35.7 44 0.0015 26.2 4.4 35 79-135 6-40 (87)
45 3js8_A Cholesterol oxidase; ch 34.4 13 0.00046 39.4 1.6 23 500-522 511-533 (540)
46 1wn2_A Peptidyl-tRNA hydrolase 32.9 67 0.0023 26.7 5.4 38 76-113 53-91 (121)
47 1xty_A PTH, peptidyl-tRNA hydr 32.6 70 0.0024 26.5 5.5 38 76-113 52-90 (120)
48 2zv3_A PTH, peptidyl-tRNA hydr 29.2 67 0.0023 26.4 4.8 38 76-113 47-85 (115)
49 1rlk_A Hypothetical protein TA 28.2 71 0.0024 26.3 4.8 38 76-113 49-87 (117)
50 1q7s_A BIT1, protein CGI-147; 24.9 1.1E+02 0.0038 25.1 5.4 36 77-112 50-86 (117)
51 2crl_A Copper chaperone for su 23.9 1.5E+02 0.0051 23.0 5.8 34 135-168 48-81 (98)
52 1yht_A DSPB; beta barrel, hydr 22.1 56 0.0019 32.7 3.5 23 86-108 92-114 (367)
53 2g2c_A Putative molybdenum cof 21.1 1.5E+02 0.0052 25.7 5.9 40 80-119 47-86 (167)
54 2lnd_A De novo designed protei 20.3 1.1E+02 0.0036 23.4 3.8 34 80-113 29-62 (112)
No 1
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=6.1e-90 Score=740.71 Aligned_cols=499 Identities=48% Similarity=0.899 Sum_probs=432.7
Q ss_pred CCchhHHhhhhcCCCCCC-CcceEEcCCCcchHHHHhhcccccCCCCCCCCCCcEEEecCCHHHHHHHHHHHHHCCCeEE
Q 009286 28 DTNEKFLQCLSVHSERTF-ISKVTYTQNNSSYISILNSLKQNLLYKPPEYGRPQVIVTPFDVSQIQAVLKCAQKHDLLVK 106 (538)
Q Consensus 28 ~~~~~~~~c~~~~~~~~~-~~~~~~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~ 106 (538)
.+.++|.+||+.....+. +.+.|++|+|+.|++++.++++|.||+......|.+|++|+|++||+++|++|+++++|++
T Consensus 2 ~~~~~f~~c~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~ 81 (518)
T 3vte_A 2 NPRENFLKCFSKHIPNNVANPKLVYTQHDQLYMSILNSTIQNLRFISDTTPKPLVIVTPSNNSHIQATILCSKKVGLQIR 81 (518)
T ss_dssp CHHHHHHHHHHHHCCC----CCCEECTTSTTHHHHHHHTCCBGGGCSSSSCCCSEEECCCSHHHHHHHHHHHHHHTCEEE
T ss_pred ChhHHHHHHHHhcCCccCCCCceEECCCCcchHHHHhhhhcccccccccCCCCCEEEEeCCHHHHHHHHHHHHHcCCcEE
Confidence 467889999998765433 7899999999999999888899999999889999999999999999999999999999999
Q ss_pred EEeCCCCCCCCccccCCCeEEEEccCCcceEEcCCCCeEEEcCCCCHHHHHHHHHHhCCCceecCCCCCcccccccCcCC
Q 009286 107 VRSGGHDHEGLSYLSEVPFVMIDMINFSQIDVDAEAKSAWVGAGATLGELYYKISEKSKNLAFPAGICPTVAVGGHLSGG 186 (538)
Q Consensus 107 ~~ggGh~~~g~~~~~~~~givIdl~~~~~i~id~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~gG 186 (538)
+||||||+.+.+.....++++|||++||+|++|+++++|+||+|+++++|+++|.++|+++.+++|.|++|||||+++||
T Consensus 82 vrggGh~~~g~~~~~~~~gvvIdl~~l~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgvgG~~~gG 161 (518)
T 3vte_A 82 TRSGGHDAEGMSYISQVPFVVVDLRNMHSIKIDVHSQTAWVEAGATLGEVYYWINEKNENLSFPGGYCPTVGVGGHFSGG 161 (518)
T ss_dssp EESSCCCTTCTTTCCSSSEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCTTEECCCCSCTTCBHHHHHHTC
T ss_pred EECCCcCCCCCccCCCCCeEEEECCCCceeEEeCCCCEEEEeCCccHHHHHHHHHHhCCCceecCCCCCCeeeeeeeCCC
Confidence 99999999988753223499999999999999999999999999999999999999987899999999999999999999
Q ss_pred ccCCCccccCchHHhhheeEEeecCceeeeccCCCcchhHHhhccCCCCeEEEEEEEEEEEecCCeEEEEEEecchh-hh
Q 009286 187 GFGYIMRKYGLGADQVIDAHLVDVNGRILDRKSMGEDLFWAIRGGGAASFGVLVAWKVNLVDVPSIVTVFTVQKTLE-QN 265 (538)
Q Consensus 187 g~g~~~~~~G~~~d~v~~~~vV~~~G~i~~~~~~~~dlf~a~rG~~~g~~Givt~~~~k~~p~~~~~~~~~~~~~~~-~~ 265 (538)
|+|+++++||+++|+|+++|||++||++++.+.+++|||||+|||++|+|||||+++||++|.|+.+..|.+.+..+ ++
T Consensus 162 g~G~~s~~~G~~~D~V~~~evV~adG~iv~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~~~ 241 (518)
T 3vte_A 162 GYGALMRNYGLAADNIIDAHLVNVDGKVLDRKSMGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIHG 241 (518)
T ss_dssp CCCTTHHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEEECCCHHH
T ss_pred CCccccCCCCchhheEEEEEEEccCCeEEEeeccccchhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEEecCCHHH
Confidence 99999999999999999999999999999754568999999999855899999999999999999888888877654 56
Q ss_pred HHHHHHHHHHHHhcCCccceEEEEEeec-------CCCceEEEEEEEEEeCCccchHHHHHhhcccCCCccccceecchH
Q 009286 266 ASQIHHKWQQIAYDLPKELVISAGLQSQ-------KGKRALVATFSAVYLGGVDRLLPLMQERFPELGLVKEDCQEMSWV 338 (538)
Q Consensus 266 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~-------~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~~~~~~~~~~~~ 338 (538)
+.+++.+||++++.+|+++++.+.+... .++..+.+.+.++|+|+.+++.+.|++.+++++....++.+++|+
T Consensus 242 ~~~~l~~~~~~~~~~p~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~w~ 321 (518)
T 3vte_A 242 LVKLFNKWQNIAYKYDKDLVLMTHFITKNITDNHGKNKTTVHGYFSSIFHGGVDSLVDLMNKSFPELGIKKTDCKEFSWI 321 (518)
T ss_dssp HHHHHHHHHHHGGGSCTTEEEEEEEEEESCC-------CEEEEEEEEEEESCHHHHHHHHHHHCGGGCCCGGGEEEECHH
T ss_pred HHHHHHHHHHHHHcCCHhHeEEEEEcccCCCCCCCcCCCceEEEEEEEEeCCHHHHhhhhhhhhhhcCCCccceeecchh
Confidence 7889999999999999999998887631 112345678899999999999999988888888777788899999
Q ss_pred HHHHHhhhhhcccc-ch---hhhhhccccccccceeeccccccCCCCHHHHHHHHHHHHhcCCceEEEEEEecCCccCCC
Q 009286 339 ESTVYHFAFEIRAS-KN---LELLLDRVNYTKYYLKAKSDYVREPIPVEVLEGMYEILYEEGGHNIYVISFPYGGRLNEI 414 (538)
Q Consensus 339 ~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~GGai~~v 414 (538)
+.+.+ ++ +++.+ .+ ++.++++......+||.||+|+.++++++.++.+++.+.+.+...+.++++++||+++++
T Consensus 322 ~~~~~-~~-~~~~~~~~~~~~~~l~~~~~~~~~~~k~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~v~~~~~GGa~~~v 399 (518)
T 3vte_A 322 DTTIF-YS-GVVNFNTANFKKEILLDRSAGKKTAFSIKLDYVKKPIPETAMVKILEKLYEEDVGAGMYVLYPYGGIMEEI 399 (518)
T ss_dssp HHHHH-TS-SSCCC-----CGGGGGCTTCSCCBEEEEEEEEESSCCCHHHHHHHHHGGGGSCTTTEEEEEEECCGGGGTS
T ss_pred hhhhh-hh-cCCccCCccchhhhhccCCcCcccceeeechhcccCCCHHHHHHHHHHHHhCCCCCeEEEEeecCccccCC
Confidence 98887 65 44322 22 455555544445678999999998999999999999887644335889999999999999
Q ss_pred CCCCCCCccCC-CceEEEEEEEeCCchhhHHHHHHHHHHHHHcCccccCCCCcccccCCCcccc-CCCCCCCccchhhhh
Q 009286 415 PETEIAFPHRT-NKFHMMYFAAWSDGEESQKVLELDRKLYEYMTPYVTKNPRATYFNCKDIEIG-RNNYGNNYTSVKEAS 492 (538)
Q Consensus 415 ~~~~tAf~~R~-~~~~i~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~Ny~d~~~~-~~~~~~~~~~~~~~~ 492 (538)
++++|||+||+ .+|.+++.+.|.+++.++++.+|++++++.|.|+.+.+++++|+||+|.|++ .+. ..+++++.++
T Consensus 400 ~~~~TAf~hR~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~p~~~~~~~g~YvNy~D~dl~~~~~--~~~~~~~~~~ 477 (518)
T 3vte_A 400 SESAIPFPHRAGIMYELWYTASWEKQEDNEKHINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLGKTNH--ASPNNYTQAR 477 (518)
T ss_dssp CTTSSSCCCCTTCCEEEEEEEEECCTTTHHHHHHHHHHHHHHTGGGSCCTTCCCCTTSCCGGGCCCCT--TSCCCHHHHH
T ss_pred CCCCCcccccCcceEEEEEEEecCCcchhHHHHHHHHHHHHHhccccCCCCccccccCCCcccccccc--ccccchhhhh
Confidence 99999999998 6999999999998888899999999999999999766678999999999886 321 1245566777
Q ss_pred hhHHhhhcccHHHHHHhhhccCCCCCcccCCCCCCCCC
Q 009286 493 IWGKKYFKNNFYRLVDVKTKVDPGNFFRNEQSIPSRIY 530 (538)
Q Consensus 493 ~~~~~Yyg~n~~RL~~IK~kyDP~nvF~~~qsI~~~~~ 530 (538)
.|+++|||+||+||++||+||||+|+|+++|||+|+.+
T Consensus 478 ~w~~~Yyg~N~~RL~~vK~~yDP~n~F~~~QsI~p~~~ 515 (518)
T 3vte_A 478 IWGEKYFGKNFNRLVKVKTKVDPNNFFRNEQSIPPLPP 515 (518)
T ss_dssp HHHHHHSSTHHHHHHHHHHHHCTTCCSCCTTCCCCCCT
T ss_pred hHHHHHhHhHHHHHHHHHhhcCchhcccCCCCCCCCCC
Confidence 89999999999999999999999999999999999865
No 2
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=3.9e-86 Score=709.63 Aligned_cols=486 Identities=39% Similarity=0.744 Sum_probs=421.5
Q ss_pred hHHhhhhcCCCCCCCcceEEcCCCcchHHHHhhcccccCCCCCCCCCCcEEEecCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 009286 32 KFLQCLSVHSERTFISKVTYTQNNSSYISILNSLKQNLLYKPPEYGRPQVIVTPFDVSQIQAVLKCAQKHDLLVKVRSGG 111 (538)
Q Consensus 32 ~~~~c~~~~~~~~~~~~~~~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggG 111 (538)
+|.+||+....+. ++.|++|+|+.|++++.++.+|.||+....+.|.+|++|+|++||+++|++|+++++|+++||||
T Consensus 1 ~~~~cl~~~~~~~--~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrGgG 78 (495)
T 3fw9_A 1 DLLSCLTFNGVRN--HTVFSADSDSDFNRFLHLSIQNPLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRSGG 78 (495)
T ss_dssp CHHHHHHHTTCCC--EEECCCCTTCHHHHHHHHTCCCGGGCSTTSCCCSEEECCCSHHHHHHHHHHHHTSSCEEEEESSC
T ss_pred ChhHHHhhcCCCC--CCeEECCCCCchHHHHhhhhhhcccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEECCC
Confidence 4789999876532 57899999999999887889999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCeEEEEccCCcceEEcCCCCeEEEcCCCCHHHHHHHHHHhCCCceecCCCCCcccccccCcCCccCCC
Q 009286 112 HDHEGLSYLSEVPFVMIDMINFSQIDVDAEAKSAWVGAGATLGELYYKISEKSKNLAFPAGICPTVAVGGHLSGGGFGYI 191 (538)
Q Consensus 112 h~~~g~~~~~~~~givIdl~~~~~i~id~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~gGg~g~~ 191 (538)
||+.|.+...+.++++|||++||+|++|+++++|+||+|+++++|+++|.++|.++.+++|.|+++||||+++|||+|++
T Consensus 79 h~~~g~~~~~~~ggvvIdl~~m~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgigG~~~gGg~G~~ 158 (495)
T 3fw9_A 79 HSYEGLSYTSDTPFILIDLMNLNRVSIDLESETAWVESGSTLGELYYAITESSSKLGFTAGWCPTVGTGGHISGGGFGMM 158 (495)
T ss_dssp CCTTCTTSCCSSCEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCSSEECCCCSCTTCBHHHHHHTCCCCTT
T ss_pred cCCCCccccCCCCeEEEECCCCCcEEEeCCCCEEEEcCCCCHHHHHHHHHHhcCCceeccCCCCCCeEeeeccCCCCccc
Confidence 99998887654458999999999999999999999999999999999999997668999999999999999999999999
Q ss_pred ccccCchHHhhheeEEeecCceeeeccCCCcchhHHhhccCCCCeEEEEEEEEEEEecCCeEEEEEEecchh-hhHHHHH
Q 009286 192 MRKYGLGADQVIDAHLVDVNGRILDRKSMGEDLFWAIRGGGAASFGVLVAWKVNLVDVPSIVTVFTVQKTLE-QNASQIH 270 (538)
Q Consensus 192 ~~~~G~~~d~v~~~~vV~~~G~i~~~~~~~~dlf~a~rG~~~g~~Givt~~~~k~~p~~~~~~~~~~~~~~~-~~~~~~~ 270 (538)
+++||+++|+|++++||++||++++++.+++||||++|||++|+|||||+++||++|.|+....+.+.++.+ +++.+++
T Consensus 159 ~~~~G~~~D~v~~~~vV~adG~i~~~~~~~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a~~~l 238 (495)
T 3fw9_A 159 SRKYGLAADNVVDAILIDANGAILDRQAMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATSLL 238 (495)
T ss_dssp HHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHHHHHH
T ss_pred ccCCCchhheEEEEEEEcCCCCEEEcCCCChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHHHHHH
Confidence 999999999999999999999999855568999999999555899999999999999999888888877653 6678899
Q ss_pred HHHHHHHhcCCccceEEEEEeecCCCceEEEEEEEEEeCCccchHHHHHhhcccCCCccccceecchHHHHHHhhhhhcc
Q 009286 271 HKWQQIAYDLPKELVISAGLQSQKGKRALVATFSAVYLGGVDRLLPLMQERFPELGLVKEDCQEMSWVESTVYHFAFEIR 350 (538)
Q Consensus 271 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (538)
.+||++++.+|+++++.+..... .+.+.+.+.++|+|+.+++.+.|++.++.+++...++.+++|++.+.+ ++ +.+
T Consensus 239 ~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~~~~~~~~-~~-~~~ 314 (495)
T 3fw9_A 239 HKWQFVAEELEEDFTLSVLGGAD--EKQVWLTMLGFHFGLKTVAKSTFDLLFPELGLVEEDYLEMSWGESFAY-LA-GLE 314 (495)
T ss_dssp HHHHHHHHHSCTTEEEEEEEEEE--TTEEEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHH-HT-TCS
T ss_pred HHHHHHHhcCChhHeEEEEEcCC--CCceEEEEEEEEeCCHHHHHHHHHHhhhhcCCCccceEEcCHHHHHHH-Hh-ccc
Confidence 99999999999999987765422 334567888999999999999888878888776778899999998877 54 322
Q ss_pred ccchhhhhhccccc-cccceeeccccccCCCCHHHHHHHHHHHHhcCCceEEEEEEecCCccCCCCCCCCCCccCC-Cce
Q 009286 351 ASKNLELLLDRVNY-TKYYLKAKSDYVREPIPVEVLEGMYEILYEEGGHNIYVISFPYGGRLNEIPETEIAFPHRT-NKF 428 (538)
Q Consensus 351 ~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~GGai~~v~~~~tAf~~R~-~~~ 428 (538)
. ++.++++... ...+||.||+|+.++++++.++.+++.+.+.+. +.++++++||+++++++++|||+||+ .+|
T Consensus 315 ~---~~~l~~~~~~~~~~~~~~ks~~~~~~l~~~~i~~l~~~~~~~~~--~~~~~~~~GGa~~~v~~~~TAf~hR~~~~~ 389 (495)
T 3fw9_A 315 T---VSQLNNRFLKFDERAFKTKVDLTKEPLPSKAFYGLLERLSKEPN--GFIALNGFGGQMSKISSDFTPFPHRSGTRL 389 (495)
T ss_dssp C---GGGGGCTTSCSCCCEEEEEEEECSSCCCHHHHHHHHHHHHHCTT--EEEEEEECCGGGGTSCTTTSSCCCCTTCCE
T ss_pred c---hhhhcCCCCCccCcceeEeehhhcCCCCHHHHHHHHHHHhhCCC--cEEEecccCCccccCCCCCCCccccCccce
Confidence 1 3334444322 346789999999999999999999999887654 78999999999999999999999997 799
Q ss_pred EEEEEEEeCCc--hhhHHHHHHHHHHHHHcCccccCCCCcccccCCCccccCCCCCC---CccchhhhhhhHHhhhcccH
Q 009286 429 HMMYFAAWSDG--EESQKVLELDRKLYEYMTPYVTKNPRATYFNCKDIEIGRNNYGN---NYTSVKEASIWGKKYFKNNF 503 (538)
Q Consensus 429 ~i~~~~~W~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~Ny~d~~~~~~~~~~---~~~~~~~~~~~~~~Yyg~n~ 503 (538)
.+++.+.|.++ +.++++.+|++++++.|.|+.+.+++++|+||.|.|++.++... .+++++.++.|+++|||+||
T Consensus 390 ~~~~~~~w~~~~~~~~~~~~~w~~~~~~~~~p~~~~~~~~~Y~Ny~d~dl~~~~~~~~~~~~~~~~~~~~w~~~Yyg~n~ 469 (495)
T 3fw9_A 390 MVEYIVAWNQSEQKKKTEFLDWLEKVYEFMKPFVSKNPRLGYVNHIDLDLGGIDWGNKTVVNNAIEISRSWGESYFLSNY 469 (495)
T ss_dssp EEEEEEEECGGGGGGHHHHHHHHHHHHHHHGGGSCCSSCCCCGGGCCGGGCCCCTTCHHHHHTHHHHHHHHHHHHHGGGH
T ss_pred EEEEEEecCCCCcchhHHHHHHHHHHHHHHhhhccCCCcccccCccCccccccccccccccccccchhhhhHHHHhHhHH
Confidence 99999999864 67788999999999999999765667899999999886311000 02344556789999999999
Q ss_pred HHHHHhhhccCCCCCcccCCCCCCC
Q 009286 504 YRLVDVKTKVDPGNFFRNEQSIPSR 528 (538)
Q Consensus 504 ~RL~~IK~kyDP~nvF~~~qsI~~~ 528 (538)
+||++||++|||+|+|+++|||||+
T Consensus 470 ~RL~~vK~~yDP~n~F~~~qsI~p~ 494 (495)
T 3fw9_A 470 ERLIRAKTLIDPNNVFNHPQSIPPM 494 (495)
T ss_dssp HHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred HHHHHHHHhhCcHhhCCCCCCCCCC
Confidence 9999999999999999999999986
No 3
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=1e-81 Score=681.05 Aligned_cols=493 Identities=43% Similarity=0.801 Sum_probs=414.8
Q ss_pred cCCCchhHHhhhhcCCCCCCCcceEEcCCCcchHHHHhhcccccCCCCCCCCCCcEEEecCCHHHHHHHHHHHHHCCCeE
Q 009286 26 AHDTNEKFLQCLSVHSERTFISKVTYTQNNSSYISILNSLKQNLLYKPPEYGRPQVIVTPFDVSQIQAVLKCAQKHDLLV 105 (538)
Q Consensus 26 ~~~~~~~~~~c~~~~~~~~~~~~~~~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v 105 (538)
+++..+++.+||..... .+.|++|+++.|.+.+.++.+|.||+.....+|.+||+|+|++||+++|++|+++++||
T Consensus 4 ~~~~~~~f~~~L~~~~~----~~~v~~~~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~~~ 79 (500)
T 3tsh_A 4 PPAAKEDFLGCLVKEIP----PRLLYAKSSPAYPSVLGQTIRNSRWSSPDNVKPLYIITPTQVSHIQSAVVCGRRHSVRI 79 (500)
T ss_dssp -----CHHHHHHHHHSC----GGGEEETTSTTHHHHHHTTCCCTTTTSTTSCCCSEEECCSSHHHHHHHHHHHHHTTCEE
T ss_pred CcccHHHHHHHHHhhCC----CCEEECCCCCccHHHHHhhhccccccCCCCCCceEEEEcCCHHHHHHHHHHHHHCCCcE
Confidence 45667889999998764 46789999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCCcccc--CCCeEEEEccCCcceEEcCCCCeEEEcCCCCHHHHHHHHHHhCCCceecCCCCCcccccccC
Q 009286 106 KVRSGGHDHEGLSYLS--EVPFVMIDMINFSQIDVDAEAKSAWVGAGATLGELYYKISEKSKNLAFPAGICPTVAVGGHL 183 (538)
Q Consensus 106 ~~~ggGh~~~g~~~~~--~~~givIdl~~~~~i~id~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~ 183 (538)
++|||||++.|.+.+. .+++++|||++||+|++|+++++|+||+|++|+||+++|.++|+.+++++|.|++|||||++
T Consensus 80 ~~r~gGh~~~g~s~~~~~~~~~~~idl~~~~~v~~d~~~~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~~ 159 (500)
T 3tsh_A 80 RVRSGGHDYEGLSYRSLQPETFAVVDLNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGNF 159 (500)
T ss_dssp EEESSCCCTTCTTTCCSSSCCEEEEECTTCCCEEEETTTTEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHHH
T ss_pred EEEcCCcCCCCCcCCCCCcCCeEEEECcCCCCEEECCCCCEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCcc
Confidence 9999999999877542 23589999999999999999999999999999999999999998888999999999999999
Q ss_pred cCCccCCCccccCchHHhhheeEEeecCceeeeccCCCcchhHHhhccCCCCeEEEEEEEEEEEecCCeEEEEEEecchh
Q 009286 184 SGGGFGYIMRKYGLGADQVIDAHLVDVNGRILDRKSMGEDLFWAIRGGGAASFGVLVAWKVNLVDVPSIVTVFTVQKTLE 263 (538)
Q Consensus 184 ~gGg~g~~~~~~G~~~d~v~~~~vV~~~G~i~~~~~~~~dlf~a~rG~~~g~~Givt~~~~k~~p~~~~~~~~~~~~~~~ 263 (538)
+|||+|.++++||+++|+|+++|||++||++++++.+++||||++|||++|+|||||+++||++|.|+.+..+.+.+...
T Consensus 160 ~~gg~g~~~~~~G~~~d~v~~~~vV~a~G~i~~~~~~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~~ 239 (500)
T 3tsh_A 160 AGGGFGMLLRKYGIAAENVIDVKLVDANGKLHDKKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVS 239 (500)
T ss_dssp HTCCCCTTHHHHCCGGGGEEEEEEECTTSCEECHHHHCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEETT
T ss_pred ccccCCccccccCChhhheeeEEEECCCceEEECCCCChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecCcH
Confidence 99999999999999999999999999999999866678999999998887899999999999999999888887777766
Q ss_pred hhHHHHHHHHHHHHhcCCccceEEEEEeecCCCceEEEEEEEEEeCCccchHHHHHhhcccCCCccccceecchHHHHHH
Q 009286 264 QNASQIHHKWQQIAYDLPKELVISAGLQSQKGKRALVATFSAVYLGGVDRLLPLMQERFPELGLVKEDCQEMSWVESTVY 343 (538)
Q Consensus 264 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~ 343 (538)
+.+.+++.+|+.+.+++|+++...+.... ....+.++|+|+.+++.+.+.+.++.++.....+..++|++.+.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~------~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 313 (500)
T 3tsh_A 240 EGAVDIINKWQVVAPQLPADLMIRIIAQG------PKATFEAMYLGTCKTLTPLMSSKFPELGMNPSHCNEMSWIQSIPF 313 (500)
T ss_dssp TTHHHHHHHHHHHGGGSCTTEEEEEEESS------SEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccChhhEEEEEecC------CCcEEEEEEecchhhhhhhhhhcchhccCCccccchhhhhccchh
Confidence 67788999999999999999887766542 235677889999988888888778888777777788899887665
Q ss_pred hhhhhccccchhhhhhccccccccceeeccccccCCCCHHHHHHHHHHHHhcCCceEEEEEEecCCccCCCCCCCCCCcc
Q 009286 344 HFAFEIRASKNLELLLDRVNYTKYYLKAKSDYVREPIPVEVLEGMYEILYEEGGHNIYVISFPYGGRLNEIPETEIAFPH 423 (538)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~GGai~~v~~~~tAf~~ 423 (538)
+. ........+.+.++......+.+.++.+..++++.+.++.+++.+...+. ...++++++||+++++++++|+|+|
T Consensus 314 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Gga~~~~~~~ata~~~ 390 (500)
T 3tsh_A 314 -VH-LGHRDALEDDLLNRQNSFKPFAEYKSDYVYQPFPKTVWEQILNTWLVKPG-AGIMIFDPYGATISATPESATPFPH 390 (500)
T ss_dssp -HH-HCCSSCHHHHHHCCCCCCCCEEEEEEEEECSCCCHHHHHHHHHTGGGSTT-CCEEEEEECCHHHHHSCTTSSSCCC
T ss_pred -hh-hccccccccccccccccccchhhhhhhhhcccCcHHHHHHHHHHhhcCCC-ceEEEEcccCccccCCCCccCcCcc
Confidence 32 21112222334444444445566677888888888888888777655443 3567789999999999999999999
Q ss_pred CC-CceEEEEEEEeCCchhhHHHHHHHHHHHHHcCccccCCCCcccccCCCccccCCCCCCCccchhhhhhhHHhhhccc
Q 009286 424 RT-NKFHMMYFAAWSDGEESQKVLELDRKLYEYMTPYVTKNPRATYFNCKDIEIGRNNYGNNYTSVKEASIWGKKYFKNN 502 (538)
Q Consensus 424 R~-~~~~i~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~~~Yyg~n 502 (538)
|+ .+|.+++...|.+++++++..+|++++++.+.++....++++|+||+|.|++.+........+...+.|++.|||+|
T Consensus 391 R~~~l~~i~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~Ny~D~dlg~~~~~~~~~~~~~~~~w~~~Y~g~N 470 (500)
T 3tsh_A 391 RKGVLFNIQYVNYWFAPGAAAAPLSWSKDIYNYMEPYVSKNPRQAYANYRDIDLGRNEVVNDVSTYASGKVWGQKYFKGN 470 (500)
T ss_dssp CTTCCEEEEEEEEECSTTCCHHHHHHHHHHHHHHGGGSCCSSCCCCTTSCCGGGCCCCEETTEECHHHHHHHHHHHHGGG
T ss_pred cCCcEEEEEEEEecCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEeccccccccccccccccccccccchHHHHhhhHH
Confidence 95 57889999999999999999999999999999997767789999999999874321111223445578999999999
Q ss_pred HHHHHHhhhccCCCCCcccCCCCCCCCCC
Q 009286 503 FYRLVDVKTKVDPGNFFRNEQSIPSRIYR 531 (538)
Q Consensus 503 ~~RL~~IK~kyDP~nvF~~~qsI~~~~~~ 531 (538)
|+||++||+||||+|+|+++|||||+..|
T Consensus 471 y~RL~~IK~kyDP~nvF~~~qsI~Pl~~~ 499 (500)
T 3tsh_A 471 FERLAITKGKVDPTDYFRNEQSIPPLIKK 499 (500)
T ss_dssp HHHHHHHHHHHCTTCCSCCTTSCCCCCC-
T ss_pred HHHHHHHHHHhCcccccCCCCCCCCCCCC
Confidence 99999999999999999999999998754
No 4
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=1.2e-75 Score=627.19 Aligned_cols=457 Identities=22% Similarity=0.384 Sum_probs=376.4
Q ss_pred hHHhhhhcCCCCCCCcceEEcCCCcchHHHHhhcccccCCCCCCCCCCcEEEecCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 009286 32 KFLQCLSVHSERTFISKVTYTQNNSSYISILNSLKQNLLYKPPEYGRPQVIVTPFDVSQIQAVLKCAQKHDLLVKVRSGG 111 (538)
Q Consensus 32 ~~~~c~~~~~~~~~~~~~~~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggG 111 (538)
+|.+||+..+ ..+++|+|+.|++.. .. |+.+....|.+|++|+|++||+++|++|+++++|+.+||||
T Consensus 2 ~l~~cl~~~~------~~v~~p~~~~y~~~~--~~----~n~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggG 69 (473)
T 3rja_A 2 AIEACLSAAG------VPIDIPGTADYERDV--EP----FNIRLPYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAKSGG 69 (473)
T ss_dssp HHHHHHHHTT------CCBCCTTSHHHHHHT--CC----SBTTSCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSC
T ss_pred hHHHHHHhCC------CcEECCCCCchHHHH--HH----hhcccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEcCC
Confidence 4789999874 458999999998863 34 44444569999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCeEEEEccCCcceE-EcCCCCeEEEcCCCCHHHHHHHHHHhCCCceecCCCCCcccccccCcCCccCC
Q 009286 112 HDHEGLSYLSEVPFVMIDMINFSQID-VDAEAKSAWVGAGATLGELYYKISEKSKNLAFPAGICPTVAVGGHLSGGGFGY 190 (538)
Q Consensus 112 h~~~g~~~~~~~~givIdl~~~~~i~-id~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~gGg~g~ 190 (538)
||+.+.+....+++++|||++||+|. +|+++.+|+||+|+++++|+++|.++| .+.++.|.|+++||||+++|||+|+
T Consensus 70 h~~~g~~~~~~~~~vvIdl~~~~~i~~vd~~~~~v~v~aG~~~~~l~~~l~~~G-~~~~p~G~~~~vgvgG~~~ggg~G~ 148 (473)
T 3rja_A 70 HSYASFGFGGENGHLMVQLDRMIDVISYNDKTGIAHVEPGARLGHLATVLNDKY-GRAISHGTCPGVGISGHFAHGGFGF 148 (473)
T ss_dssp CCTTCGGGTSSSSCEEEECTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHHH-SEECCCCSCTTCBHHHHHHTCCCCT
T ss_pred CCCCCCcccCCCCeEEEECCCCCceEEEcCCCCEEEECCCCCHHHHHHHHHHcC-CEEeccCCCCCcEeeeeccCCCCCc
Confidence 99987554433358999999999996 999999999999999999999999998 4788999999999999999999999
Q ss_pred CccccCchHHhhheeEEeecCceeee-ccCCCcchhHHhhccCCCCeEEEEEEEEEEEecCCeEEEEEEecchh--hhHH
Q 009286 191 IMRKYGLGADQVIDAHLVDVNGRILD-RKSMGEDLFWAIRGGGAASFGVLVAWKVNLVDVPSIVTVFTVQKTLE--QNAS 267 (538)
Q Consensus 191 ~~~~~G~~~d~v~~~~vV~~~G~i~~-~~~~~~dlf~a~rG~~~g~~Givt~~~~k~~p~~~~~~~~~~~~~~~--~~~~ 267 (538)
.+++||+++|+|+++|||++||++++ +..+++||||++||++ |+|||||+++||++|.|+....+.+.++.. +++.
T Consensus 149 ~~~~~G~~~D~v~~~~vV~a~G~v~~~~~~~~~dLf~a~rG~~-g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~ 227 (473)
T 3rja_A 149 SSHMHGLAVDSVVGVTVVLADGRIVEASATENADLFWGIKGAG-SNFGIVAVWKLATFPAPKVLTRFGVTLNWKNKTSAL 227 (473)
T ss_dssp THHHHCCGGGGEEEEEEECTTSCEEEEETTBSHHHHHHHHHHG-GGTCEEEEEEEECEECCSCEEEEEEECCCCSHHHHH
T ss_pred ccccccchHhheeeEEEEecCCeEEEeCCCCCcchhhcccCCC-CceEEEEEEEEEEEeCCCceEEEEEEecCccHHHHH
Confidence 99999999999999999999999997 5667999999999997 899999999999999998888887777654 3477
Q ss_pred HHHHHHHHHHh-cCCccceEEEEEeecCCCceEEEEEEEEEeCCccchHHHHHhhcccCC-Cccccce-ecchHHHHHHh
Q 009286 268 QIHHKWQQIAY-DLPKELVISAGLQSQKGKRALVATFSAVYLGGVDRLLPLMQERFPELG-LVKEDCQ-EMSWVESTVYH 344 (538)
Q Consensus 268 ~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~-~~~~~~~-~~~~~~~~~~~ 344 (538)
+++++|+++.. ++|+++.+.+.+. +. . .+.+.++|+|+.+++.+.+++++...+ +...++. .++|++.+.+
T Consensus 228 ~~~~~~~~~~~~~~p~~l~~~~~~~-~~--~--~~~~~~~~~G~~~~~~~~l~pl~~~~p~~~~~~~~~~~~~~~~~~~- 301 (473)
T 3rja_A 228 KGIEAVEDYARWVAPREVNFRIGDY-GA--G--NPGIEGLYYGTPEQWRAAFQPLLDTLPAGYVVNPTTSLNWIESVLS- 301 (473)
T ss_dssp HHHHHHHHHHHHTCCTTEEEEEEES-SS--S--CCEEEEEEESCHHHHHHHHHHHHTTSCTTCEECCCEEECHHHHHHH-
T ss_pred HHHHHHHHHhhhCCChhHEEEEEEc-CC--C--cEEEEEEecCCHHHHHHHHHHHHHhCCCCcceeeecccCHHHHHHh-
Confidence 89999999988 8999999888775 21 1 267788999999999988887544333 3456677 8999997766
Q ss_pred hhhhccccchhhhhhccccccccceeeccccccCCCCHHHHHHHHHHHHhcC-C---ceEEEEEEecCC---ccCCCCCC
Q 009286 345 FAFEIRASKNLELLLDRVNYTKYYLKAKSDYVREPIPVEVLEGMYEILYEEG-G---HNIYVISFPYGG---RLNEIPET 417 (538)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~-~---~~~~i~~~~~GG---ai~~v~~~ 417 (538)
+. .. ...+...+ .....++.||.+. +++++++++.+++.+.+.. . ..+.++++++|| ++++++++
T Consensus 302 ~~-~~---~~~~~~~~---~~~~~~~~ks~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~ai~~v~~~ 373 (473)
T 3rja_A 302 YS-NF---DHVDFITP---QPVENFYAKSLTL-KSIKGDAVKNFVDYYFDVSNKVKDRFWFYQLDVHGGKNSQVTKVTNA 373 (473)
T ss_dssp TS-SS---SCCCCSSC---CCCBEEEEEEEEE-SCCTTHHHHHHHHHHHHTGGGCCSSEEEEEEEECCSTTCGGGGSCTT
T ss_pred hh-cC---CCcccccC---CCCCcceEecccc-CCCCHHHHHHHHHHHHhcCCCCCCcceEEEEEecCCcchhhcCCCCC
Confidence 43 11 01110000 0034567888775 4699999999999886532 1 245788999998 67889999
Q ss_pred CCCCccCCCceEEEEEEEeCC-chhhHHHHHHHHHHHHHcCccccCCCCcccccCCCccccCCCCCCCccchhhhhhhHH
Q 009286 418 EIAFPHRTNKFHMMYFAAWSD-GEESQKVLELDRKLYEYMTPYVTKNPRATYFNCKDIEIGRNNYGNNYTSVKEASIWGK 496 (538)
Q Consensus 418 ~tAf~~R~~~~~i~~~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~~ 496 (538)
+|||+||+..|.+++.+.|.+ ++.+++..+|++++++.+.+.....+.++|+||+|.+++ .+.|++
T Consensus 374 ~TAf~hR~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~YvNy~d~~~~-------------~~~~~~ 440 (473)
T 3rja_A 374 ETAYPHRDKLWLIQFYDRYDNNQTYPETSFKFLDGWVNSVTKALPKSDWGMYINYADPRMD-------------RDYATK 440 (473)
T ss_dssp TSSCCCTTCSEEEEEEEEECTTSCCCTTTHHHHHHHHHHHHTTSCGGGEECCGGGCCCSSC-------------HHHHHH
T ss_pred CCccccCCccEEEEEEEEeCCCCccchHHHHHHHHHHHHHHhhCCCCCCceEecCCCcccc-------------chhHHH
Confidence 999999999999999999964 555566678888877777554332346899999998864 135999
Q ss_pred hhhcccHHHHHHhhhccCCCCCcccCCCCCCCC
Q 009286 497 KYFKNNFYRLVDVKTKVDPGNFFRNEQSIPSRI 529 (538)
Q Consensus 497 ~Yyg~n~~RL~~IK~kyDP~nvF~~~qsI~~~~ 529 (538)
.|||+||+||++||+||||+|+|+++|||+|++
T Consensus 441 ~yyg~n~~RL~~vK~kyDP~n~F~~~qsI~p~~ 473 (473)
T 3rja_A 441 VYYGENLARLQKLKAKFDPTDRFYYPQAVRPVK 473 (473)
T ss_dssp HHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCCC
T ss_pred HHHHHHHHHHHHHhhccCchhhCCCCcCCCCCC
Confidence 999999999999999999999999999999874
No 5
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=1.4e-72 Score=606.12 Aligned_cols=452 Identities=23% Similarity=0.338 Sum_probs=359.2
Q ss_pred CcceEEcCCCcchHHHHhhcccccCCCCCCCCCCcEEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCccccCCCe
Q 009286 46 ISKVTYTQNNSSYISILNSLKQNLLYKPPEYGRPQVIVTPFDVSQIQAVLKCAQKHDLLVKVRSGGHDHEGLSYLSEVPF 125 (538)
Q Consensus 46 ~~~~~~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~g 125 (538)
+.+.+++|+|+.|++++ ..+|.|| ...|.+|++|+|++||+++|++|+++++||++||||||+.+.+...+ ++
T Consensus 8 ~~~~~~~p~~~~y~~~~--~~~n~~~----~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~~-~g 80 (501)
T 3pop_A 8 VPPFTVGREDPRYIELS--HSDNHRF----VVEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCGQDFVGTPR-RD 80 (501)
T ss_dssp -CCEEEETTSTTHHHHT--CCSCTTS----CCCCSEEEECSSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTSSC-CS
T ss_pred CCCceECCCCcchHHHH--HHHhhcc----CCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEeCCccCCCccccCC-CE
Confidence 46789999999999875 3556666 45999999999999999999999999999999999999998876542 48
Q ss_pred EEEEccCCcceEEcCCCCeEEEcCCCCHHHHHHHHHH-hCCCceecCCCCCcccccccCcCCccCCCccccCchHHhhhe
Q 009286 126 VMIDMINFSQIDVDAEAKSAWVGAGATLGELYYKISE-KSKNLAFPAGICPTVAVGGHLSGGGFGYIMRKYGLGADQVID 204 (538)
Q Consensus 126 ivIdl~~~~~i~id~~~~~v~v~~G~~~~~l~~~l~~-~g~~l~~~~g~~~~vgvgG~~~gGg~g~~~~~~G~~~d~v~~ 204 (538)
++|||++||+|++|+++++|+||+|+++++|+++|.+ +| +.++.|.|++|||||+++|||+|+++++||+++|+|++
T Consensus 81 vvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~ 158 (501)
T 3pop_A 81 LVLDLHNLHAIGPAADGAGVRVGSGATVDQVQKALFRRWN--AALPLGACSAVGMGGLVAGGGYGPLSRQLGLVVDHLHA 158 (501)
T ss_dssp EEEECTTCCCEEECTTSSSEEEETTCBHHHHHHHHHHHHS--BCCCCCSBTTCBHHHHHHHCCCCTTHHHHCCGGGGEEE
T ss_pred EEEEecccCCeEEcCCCCEEEEECCcCHHHHHHHHHhhcC--eEeCCCCCCCceEeeccccCCCcccccccccHHHhEEE
Confidence 9999999999999999999999999999999999974 56 78899999999999999999999999999999999999
Q ss_pred eEEee--cCce--eee----ccCCCcchhHHhhccCCCCeEEEEEEEEEE----------EecC-CeEEEEEEecchh--
Q 009286 205 AHLVD--VNGR--ILD----RKSMGEDLFWAIRGGGAASFGVLVAWKVNL----------VDVP-SIVTVFTVQKTLE-- 263 (538)
Q Consensus 205 ~~vV~--~~G~--i~~----~~~~~~dlf~a~rG~~~g~~Givt~~~~k~----------~p~~-~~~~~~~~~~~~~-- 263 (538)
+|||+ +||+ ++. ++.+|+|||||+||||+|+|||||+++||+ +|.+ ..+..+.+.|+..
T Consensus 159 ~evV~~da~G~~~~v~~~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~~~~~~~~~~~~p~~~~~v~~~~~~~~~~~~ 238 (501)
T 3pop_A 159 VEVAVVDESRTVRLVTARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFPWAMI 238 (501)
T ss_dssp EEEEEECTTSCEEEEEEETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECCCTTTCBTTTTBCBCCSEEEEEEEEEEGGGC
T ss_pred EEEEEecCCCCEEEEEeccCCCCCCccHHHHhhccCCCCcEEEEEEEEEeccccCCChhhcCCCCceEEEEEEEEchhhc
Confidence 99999 8999 443 235689999999998559999999999999 7654 4566667776543
Q ss_pred --hhHHHHHHHHHHHHh--cCCccc----eEEEEEeecCCCceEEEEEEEEEeCCccchHHHHHhhccc----CCC-ccc
Q 009286 264 --QNASQIHHKWQQIAY--DLPKEL----VISAGLQSQKGKRALVATFSAVYLGGVDRLLPLMQERFPE----LGL-VKE 330 (538)
Q Consensus 264 --~~~~~~~~~~~~~~~--~~p~~~----~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~----l~~-~~~ 330 (538)
+.+.++++.|+++.. ..|++. ...+.+... ..+ .+.+...|.|+.+++.+.+++++.. ++. +..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~g~~~~~~~~l~~~~~~~~~~~g~~p~~ 315 (501)
T 3pop_A 239 DETSFVTVMRRFFEWHERHSEPGSPESSLFATFFVNHV-SSG--VLQLMVQQDADVDPEGEILARFVASLTEGTGVVGIP 315 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCTTCGGGGEEEEEEEECG-GGC--EEEEEEEEETTTCTTCHHHHHHHHHHHTTSSCCCEE
T ss_pred CHHHHHHHHHHHHHHHhhccCCCccccceEEEEEecCC-CCC--eEEEEEEEeCChHHHHHHHHHHHHhhhhccCCCccc
Confidence 234577888888765 345543 333333211 112 2455667889888876666664432 221 122
Q ss_pred cceecchHHHHHHhhhhhccccchhhhhhccccccccceeeccccccCCCCHHHHHHHHHHHHhc-CCceEEEEEEecCC
Q 009286 331 DCQEMSWVESTVYHFAFEIRASKNLELLLDRVNYTKYYLKAKSDYVREPIPVEVLEGMYEILYEE-GGHNIYVISFPYGG 409 (538)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~-~~~~~~i~~~~~GG 409 (538)
++..++|++...+ + +.+.+.+ ....++|.|+.|+.++++++.++.+++.+... +...+.++++++||
T Consensus 316 ~~~~~~~~~~~~~-~--~~~~~~~---------~~~~~~~~ks~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~GG 383 (501)
T 3pop_A 316 RGGVMSWLTGTRY-M--SQADCGD---------VMGARSASKSAYHRAAPTDEQLSVLHRHLHADHPGQASYVMFNSYGG 383 (501)
T ss_dssp EEEEEEHHHHHHH-T--CBCSCGG---------GTTCEEEEEEEEESSCCCHHHHHHHHHHHTSSSCCTTEEEEEEECCG
T ss_pred eeEEeCHHHHHhh-h--cCCCCCc---------ccccccceecccccCCCCHHHHHHHHHHHHhcCCCCceEEEEEecCc
Confidence 3778899986654 2 2111100 01235678899988889999999999988653 22357889999999
Q ss_pred ccCCCCCCCCCCccCCCceEEEEEEEeCCchhhHHHHHHHHHHHHHcCcccc------CCCCcccccCCCccccCCCCCC
Q 009286 410 RLNEIPETEIAFPHRTNKFHMMYFAAWSDGEESQKVLELDRKLYEYMTPYVT------KNPRATYFNCKDIEIGRNNYGN 483 (538)
Q Consensus 410 ai~~v~~~~tAf~~R~~~~~i~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~Y~Ny~d~~~~~~~~~~ 483 (538)
+++++++++|||+||+..|++++...|.+++.++++.+|++++++.|.+... ..+.++|+||+|.|++.++.
T Consensus 384 av~~v~~~~TAf~hR~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~g~p~~~~~~~gaYvNy~d~dl~~~~~-- 461 (501)
T 3pop_A 384 EINRRGPSDAAVPQRDSVVKSSWFSAWQDAELDELHLGWLRGLYEEFFAGTGGVPVTGGRTDGCYINYPDADLLDPAR-- 461 (501)
T ss_dssp GGGGSCTTTSSCCCCSCSEEEEEEEEESCGGGHHHHHHHHHHHHHHHTGGGTTSCCTTSSBCCCCTTSCCGGGGCTTT--
T ss_pred ccccCCCCCCCccCcCccEEEEEEEEeCCcchHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCceeccCCCcccccccc--
Confidence 9999999999999999999999999999888889999999999999976531 22468999999999863211
Q ss_pred CccchhhhhhhHHhhhcccHHHHHHhhhccCCCCCcccCCCCCC
Q 009286 484 NYTSVKEASIWGKKYFKNNFYRLVDVKTKVDPGNFFRNEQSIPS 527 (538)
Q Consensus 484 ~~~~~~~~~~~~~~Yyg~n~~RL~~IK~kyDP~nvF~~~qsI~~ 527 (538)
++ .+..|++.|||+||+||++||+||||+|+|+++|||+|
T Consensus 462 -~~---~~~~w~~~Yyg~N~~RL~~vK~kyDP~n~F~~~qsI~p 501 (501)
T 3pop_A 462 -NR---SGEPWHHLYYKDNYARLRSAKRAWDPLNTFHHSMSIGL 501 (501)
T ss_dssp -CC---SSCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred -cc---ccchHHHHHhHhHHHHHHHHHHHhCcccccCCCCCCCC
Confidence 11 12349999999999999999999999999999999987
No 6
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=2.4e-68 Score=577.29 Aligned_cols=457 Identities=24% Similarity=0.352 Sum_probs=352.7
Q ss_pred HHhhhhcCCCCCCCcceEEcCCCcchHHHHhhcccccCCCCCCCCCCcEEEecCCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 009286 33 FLQCLSVHSERTFISKVTYTQNNSSYISILNSLKQNLLYKPPEYGRPQVIVTPFDVSQIQAVLKCAQKHDLLVKVRSGGH 112 (538)
Q Consensus 33 ~~~c~~~~~~~~~~~~~~~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh 112 (538)
..+||... +..+++|+|+.|++.. +..+|.||.. .|.+|++|+|++||+++|++|+++++||.+|||||
T Consensus 23 ~~~~l~~~------~~~v~~p~d~~Y~~~~-~~~~n~~~~~----~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh 91 (523)
T 2wdx_A 23 GERCLPPA------GPVKVTPDDPRYLNLK-LRGANSRFNG----EPDYIHLVGSTQQVADAVEETVRTGKRVAVRSGGH 91 (523)
T ss_dssp ---CCCCC------CCEEECTTSTTHHHHH-TCSSCTTCCC----CCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCC
T ss_pred chhhcccC------CCeEECCCCcchHHHH-hhhhhhcccC----CCCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCC
Confidence 34898875 4679999999999875 3467888854 89999999999999999999999999999999999
Q ss_pred CCCCCccccCCCeEEEEccCCcceEEcCCCCeEEEcCCCCHHHHHHHHHH-hCCCceecCCCCCcccccccCcCCccCCC
Q 009286 113 DHEGLSYLSEVPFVMIDMINFSQIDVDAEAKSAWVGAGATLGELYYKISE-KSKNLAFPAGICPTVAVGGHLSGGGFGYI 191 (538)
Q Consensus 113 ~~~g~~~~~~~~givIdl~~~~~i~id~~~~~v~v~~G~~~~~l~~~l~~-~g~~l~~~~g~~~~vgvgG~~~gGg~g~~ 191 (538)
|+.+.+...+ ++++|||++||+|++|+++.+|+||+|++|.+|+++|.+ +| +.++.|.|++|||||+++|||+|++
T Consensus 92 ~~~g~~~~~~-~gvvIdl~~m~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~~ 168 (523)
T 2wdx_A 92 CFEDFVDNPD-VKVIIDMSLLTEIAYDPSMNAFLIEPGNTLSEVYEKLYLGWN--VTIPGGVCGGVGVGGHICGGGYGPL 168 (523)
T ss_dssp CSSSSSSSTT-CCEEEECTTCCCEEEETTTTEEEECTTCBHHHHHHHHHHHHS--CCCCCCCCTTCBHHHHHHHTCCCTT
T ss_pred CCCCCccCCC-CeEEEEcccCCCEEEcCCCCEEEEcCCCCHHHHHHHHHHhcC--eEEccCCCCCCeeCccccCCCCCcc
Confidence 9998776532 489999999999999999999999999999999999984 77 6788999999999999999999999
Q ss_pred ccccCchHHhhheeEEeecC--ceeee---ccC-CCcc--hhHHhhccCCCCeEEEEEEEEEE-----------EecCC-
Q 009286 192 MRKYGLGADQVIDAHLVDVN--GRILD---RKS-MGED--LFWAIRGGGAASFGVLVAWKVNL-----------VDVPS- 251 (538)
Q Consensus 192 ~~~~G~~~d~v~~~~vV~~~--G~i~~---~~~-~~~d--lf~a~rG~~~g~~Givt~~~~k~-----------~p~~~- 251 (538)
+++||+++|+|+++|||++| |+++. +.. +++| ||||+|||++|+|||||+++||+ +|.|+
T Consensus 169 s~~~G~~~D~v~~~evV~~d~~G~v~~~~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~~~ 248 (523)
T 2wdx_A 169 SRQFGSVVDYLYAVEVVVVNKQGKARVIVATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKPPA 248 (523)
T ss_dssp HHHHCCGGGGEEEEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCCCS
T ss_pred cccccChhheEEEEEEEEecCCccEEEEecccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCCCcc
Confidence 99999999999999999955 99753 332 4555 99999987668999999999999 99876
Q ss_pred eEEEEEEecchh----hhHHHHHHHHHHHHhc--CCcc----ceEEEEEeec-CCCceEEEEEEEEEeCCccchHHHHHh
Q 009286 252 IVTVFTVQKTLE----QNASQIHHKWQQIAYD--LPKE----LVISAGLQSQ-KGKRALVATFSAVYLGGVDRLLPLMQE 320 (538)
Q Consensus 252 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~p~~----~~~~~~~~~~-~~~~~~~~~~~~~~~G~~~~~~~~l~~ 320 (538)
.+..+.+.|+.. +...+++++|+++... .|++ +...+.+... .+...+.+.+...|.|+.++..+.+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~l~~ 328 (523)
T 2wdx_A 249 TLLTSTVTFDWAGMTEAAFSRLLRNHGEWYERNSGPDSPYTGLWSQLMIGNEVPGMGESGFMMPIQVDATRPDARRLLDA 328 (523)
T ss_dssp EEEEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEECCCTTCTTCSEEEEEEEETTSTTHHHHHHH
T ss_pred cEEEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCccccceEEEEEeccCCCCCcceeEEEEEEEeCCHHHHHHHHHH
Confidence 466667777642 2346788888887654 5655 2333333221 111122455667889988777766665
Q ss_pred hccc----CC-CccccceecchHHHHHHhhhhhccccchhhhhhccccccccceeeccccccCCCCHHHHHHHHHHHHhc
Q 009286 321 RFPE----LG-LVKEDCQEMSWVESTVYHFAFEIRASKNLELLLDRVNYTKYYLKAKSDYVREPIPVEVLEGMYEILYEE 395 (538)
Q Consensus 321 ~~~~----l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~ 395 (538)
++.. ++ .....+..++|.+.... + .. ...+++.++.+..++++.+.++.+++.+...
T Consensus 329 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~--------------~~---~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 390 (523)
T 2wdx_A 329 HIEAVIDGVPPAEVPEPIEQRWLASTPG-R--------------GG---RGPASKTKAGYLRKRLTDRQIQAVYENMTHM 390 (523)
T ss_dssp HHHHHHTTCTTCBCCCCEEEETTSSCCC-C--------------CS---SCCEEEEEEEEESSCCCHHHHHHHHHHHTCC
T ss_pred HHHHHHhhcCCCccccceeccHHHHHHh-h--------------cC---CCCceeeecccccCCCCHHHHHHHHHHHHhc
Confidence 3321 23 22233445666552111 0 00 0114556777776678888899999988653
Q ss_pred C-CceEEEEEEecCCccCCCCCCCCCCccCCCceEEEEEEEeCCchhhHHHHHHHHHHHHHcCccccC------CCCccc
Q 009286 396 G-GHNIYVISFPYGGRLNEIPETEIAFPHRTNKFHMMYFAAWSDGEESQKVLELDRKLYEYMTPYVTK------NPRATY 468 (538)
Q Consensus 396 ~-~~~~~i~~~~~GGai~~v~~~~tAf~~R~~~~~i~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~Y 468 (538)
. ...+.+.++.+||++++++.++|+|+||+.+|++++...|.+++.++...+|++++++.+...... ...++|
T Consensus 391 ~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~l~~~~~g~p~~~~~~~g~Y 470 (523)
T 2wdx_A 391 DGIDYGAVWLIGYGGKVNTVDPAATALPQRDAILKVNYITGWANPGNEAKHLTWVRKLYADVYAETGGVPVPNDVSDGAY 470 (523)
T ss_dssp TTCSEEEEEEEECCGGGGGSCTTTSSCCCCSCSEEEEEEEEESSGGGHHHHHHHHHHHHHHHTGGGTTSCCSCSSBCCCC
T ss_pred CCCCceEEEEEecCCccccCCCccccccccCceEEEEEEEEcCCCccHHHHHHHHHHHHHHHHhhhcCCCccCCCCCcce
Confidence 2 235678889999999999999999999999999999999999888899999999999998732211 135799
Q ss_pred ccCCCccccCCCCCCCccchhhhhhhHHhhhcccHHHHHHhhhccCCCCCcccCCCCCC
Q 009286 469 FNCKDIEIGRNNYGNNYTSVKEASIWGKKYFKNNFYRLVDVKTKVDPGNFFRNEQSIPS 527 (538)
Q Consensus 469 ~Ny~d~~~~~~~~~~~~~~~~~~~~~~~~Yyg~n~~RL~~IK~kyDP~nvF~~~qsI~~ 527 (538)
+||+|.+++..+. ++++ ..|++.|||+||+||++||+||||+|+|+++|+|+|
T Consensus 471 ~Ny~d~~~~~~~~---~~s~---~~~~~~yyg~n~~RL~~iK~kyDP~~vF~~~qsI~p 523 (523)
T 2wdx_A 471 INYPDSDLADPGL---NTSG---VPWHDLYYKGNHPRLRKVKAAYDPRNHFHHALSIRP 523 (523)
T ss_dssp TTSCCGGGGCTTT---CCSS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred ecCCccccccccc---ccch---hHHHHHHHHHHHHHHHHHHHHhCcHhhcCCCCCCCC
Confidence 9999998762111 1111 138999999999999999999999999999999987
No 7
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=8.4e-68 Score=573.28 Aligned_cols=461 Identities=25% Similarity=0.377 Sum_probs=349.8
Q ss_pred chhHHhhhhcCCCCCCCcceEEcCCCcchHHHHhhcccccCCCCCCCCCCcEEEecCCHHHHHHHHHHHHHCCCeEEEEe
Q 009286 30 NEKFLQCLSVHSERTFISKVTYTQNNSSYISILNSLKQNLLYKPPEYGRPQVIVTPFDVSQIQAVLKCAQKHDLLVKVRS 109 (538)
Q Consensus 30 ~~~~~~c~~~~~~~~~~~~~~~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~g 109 (538)
..+...|+... +..+++|+|+.|++.. +..+|.||. ..|.+|++|+|++||+++|++|+++++|+.+||
T Consensus 18 ~~~~~~~~~~~------~~~v~~p~d~~Y~~~~-~~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~vrg 86 (521)
T 2ipi_A 18 EFDGGACGART------ALVKVDRVDRRYQDLV-TRGFNGRFR----GRPDVVYVVHTADQVVDAVNQAMAAGQRIAVRS 86 (521)
T ss_dssp -----------------CCCEEESSSTTHHHHH-TCCSCTTCC----CCCSEEEECSSHHHHHHHHHHHHHHTCCEEEES
T ss_pred hccccccccCC------CCeEECCCCcchHHHH-hcccccccc----CCCCEEEEcCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 44566788765 3568999999999875 346688885 489999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCeEEEEccCCcceEEcCCCCeEEEcCCCCHHHHHHHHH-HhCCCceecCCCCCcccccccCcCCcc
Q 009286 110 GGHDHEGLSYLSEVPFVMIDMINFSQIDVDAEAKSAWVGAGATLGELYYKIS-EKSKNLAFPAGICPTVAVGGHLSGGGF 188 (538)
Q Consensus 110 gGh~~~g~~~~~~~~givIdl~~~~~i~id~~~~~v~v~~G~~~~~l~~~l~-~~g~~l~~~~g~~~~vgvgG~~~gGg~ 188 (538)
||||+.+.+... .++++|||++||+|++|++..+|+||+|++|.+|+++|. ++| +.+++|.|+++||||+++|||+
T Consensus 87 gGh~~~g~~~~~-~~gvvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~ 163 (521)
T 2ipi_A 87 GGHCFEGFVDDP-AVRAVIDMSQMRQVFYDSGKRAFAVEPGATLGETYRALYLDWG--VTIPAGVCPQVGVGGHVLGGGY 163 (521)
T ss_dssp SCCCTTCGGGCT-TCCEEEECTTCCCEEEETTTTEEEECTTSBHHHHHHHHHHHHS--BCCCCCSCTTCBHHHHTTTTCC
T ss_pred CCcCCCCCcccC-CCeEEEecccCCCeEEeCCCCEEEEeCCcCHHHHHHHHHHhcC--ceeCCCCCCCcccCCcccCCCC
Confidence 999999876533 248999999999999999999999999999999999997 677 6789999999999999999999
Q ss_pred CCCccccCchHHhhheeEEeecC--ceeee---ccC-CCc--chhHHhhccCCCCeEEEEEEEEEE-----------Eec
Q 009286 189 GYIMRKYGLGADQVIDAHLVDVN--GRILD---RKS-MGE--DLFWAIRGGGAASFGVLVAWKVNL-----------VDV 249 (538)
Q Consensus 189 g~~~~~~G~~~d~v~~~~vV~~~--G~i~~---~~~-~~~--dlf~a~rG~~~g~~Givt~~~~k~-----------~p~ 249 (538)
|+++++||+++|+|+++|||++| |+++. +.. +++ |||||+|||++|+|||||+++||+ +|.
T Consensus 164 g~~s~~~G~~~D~v~~~evV~~d~~G~i~~~~~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~~p~ 243 (521)
T 2ipi_A 164 GPLSRRDGVVADHLYAVEVVVVDASGRARKVVATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPSQLLPK 243 (521)
T ss_dssp CTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGGGSSCB
T ss_pred CccccccccHhhcEEEEEEEEecCCccEEEEecccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccCCCcccccCC
Confidence 99999999999999999999977 98742 322 455 499999997558999999999999 998
Q ss_pred CC-eEEEEEEecchh----hhHHHHHHHHHHHHhc--CCcc----ceEEEEEeecCCCceEEEEEEEEEeCCccchHHHH
Q 009286 250 PS-IVTVFTVQKTLE----QNASQIHHKWQQIAYD--LPKE----LVISAGLQSQKGKRALVATFSAVYLGGVDRLLPLM 318 (538)
Q Consensus 250 ~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~p~~----~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l 318 (538)
|+ .+..+.+.|+.+ +...+++++|+++... .|++ +...+.+.. .... .+.+...|.|+.++..+.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~l~~~~~~~~-~~~~--~~~~~~~~~g~~~~~~~~l 320 (521)
T 2ipi_A 244 APTSTLRHIVTWDWSALTEEAFTRIIDNHGAWHQSNSAAGTPYASMHSVFYLNS-RAAG--QILLDIQIDGGLDGAEALL 320 (521)
T ss_dssp CCSCEEEEEEEEESTTCCHHHHHHHHHHHHHHHHHSCSSSSGGGGCEEEEEEEC-TTSC--EEEEEEEEETTSTTHHHHH
T ss_pred CCceEEEEEEEecccccCHHHHHHHHHHHHHHHHhccCCCccccceEEEEEecc-CCCC--ceEEEEEeccCHHHHHHHH
Confidence 76 455556666432 2345788888887654 4554 333333322 1112 2445567889887776666
Q ss_pred Hhhccc----CC-CccccceecchHHHHHHhhhhhccccchhhhhhccccccccceeeccccccCCCCHHHHHHHHHHHH
Q 009286 319 QERFPE----LG-LVKEDCQEMSWVESTVYHFAFEIRASKNLELLLDRVNYTKYYLKAKSDYVREPIPVEVLEGMYEILY 393 (538)
Q Consensus 319 ~~~~~~----l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~ 393 (538)
++++.. ++ +....+..++|.+.... +. . . . .. ..+++.++.++.++++.+.++.+++.+.
T Consensus 321 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~-~~-~---~--------~-~~-~~~~~~~s~~~~~~~~~~~i~~~~~~~~ 385 (521)
T 2ipi_A 321 NDFVAAVNEGTGVEPAVQRSTEPWLRATLA-NK-F---D--------T-GG-FDRTKSKGAYLRKPWTAAQAATLYRHLS 385 (521)
T ss_dssp HHHHHHHTTTCSSCCEEEEEEECHHHHHTC-CC-C---C--------C-TT-CCEEEEEEEEESSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCccceeeecCHHHHHHh-hc-C---C--------C-CC-CccceeeccccccCCCHHHHHHHHHHHH
Confidence 653321 23 22344556788874332 11 0 0 0 00 0234556777776788899999999887
Q ss_pred hcCCceEEEEEEecCCccCCCCCCCCCCccCCCceEEEEEEEeCCchhhHHHHHHHHHHHHHcCccccC------CCCcc
Q 009286 394 EEGGHNIYVISFPYGGRLNEIPETEIAFPHRTNKFHMMYFAAWSDGEESQKVLELDRKLYEYMTPYVTK------NPRAT 467 (538)
Q Consensus 394 ~~~~~~~~i~~~~~GGai~~v~~~~tAf~~R~~~~~i~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 467 (538)
..+...+.+.++++||++++++.++|||+||+..|++++...|.+++.++...+|++++++.+...... ...++
T Consensus 386 ~~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~g~ 465 (521)
T 2ipi_A 386 ADSQVWGEVSLYSYGGKVNSVPETATATAQRDSIIKVWMSATWMDPAHDDANLAWIREIYREIFATTGGVPVPDDRTEGT 465 (521)
T ss_dssp SCCSSEEEEEEEECCGGGGGSCTTTSSCCCCSCSEEEEEEEEESCGGGHHHHHHHHHHHHHHHTTTTTSSCCSSSSBCCC
T ss_pred hCCCCceEEEEEecCCcccCCCCccccccccchhhhcceeEecCCCCchHHHHHHHHHHHHHHHhhhcCCCcccCCCCce
Confidence 654446788899999999999999999999999999999999999888889999999999999733211 13579
Q ss_pred cccCCCccccCCCCCCCccchhhhhhhHHhhhcccHHHHHHhhhccCCCCCcccCCCCCCC
Q 009286 468 YFNCKDIEIGRNNYGNNYTSVKEASIWGKKYFKNNFYRLVDVKTKVDPGNFFRNEQSIPSR 528 (538)
Q Consensus 468 Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~~~Yyg~n~~RL~~IK~kyDP~nvF~~~qsI~~~ 528 (538)
|+||+|.+++.... ++. ...|++.|||+||+||++||+||||+|+|+++|+|+|.
T Consensus 466 Y~Ny~d~~~~~~~~---~~~---~~~~~~~y~g~n~~RL~~iK~kyDP~~vF~~~qsI~p~ 520 (521)
T 2ipi_A 466 FINYPDVDLVDERW---NTS---GVPWYTLYYKGNYPRLQKVKARWDPRDVFRHALSVRPP 520 (521)
T ss_dssp CTTSCCGGGGCTTT---SCC---SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred EeCCCCcccccccc---ccc---hhhHHHhhhhhHHHHHHHHHHHhCCcCEecCCCCCCCC
Confidence 99999998752110 000 12399999999999999999999999999999999985
No 8
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=8.8e-67 Score=565.53 Aligned_cols=451 Identities=25% Similarity=0.383 Sum_probs=348.2
Q ss_pred cceEEcCCCcchHHHHhhcccccCCCCCCCCCCcEEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCccccCCCeE
Q 009286 47 SKVTYTQNNSSYISILNSLKQNLLYKPPEYGRPQVIVTPFDVSQIQAVLKCAQKHDLLVKVRSGGHDHEGLSYLSEVPFV 126 (538)
Q Consensus 47 ~~~~~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~gi 126 (538)
...|++|+|+.|+++. ..+|.||. ..|.+|++|+|++||+++|++|+++++||++||||||+.+.+... .+++
T Consensus 33 ~~~v~~p~~~~Y~~~~--~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~-~~gv 105 (530)
T 2y3s_A 33 HIDSVAPGDIRYEDLR--RGENLRFV----GDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVRSGGHCYEDFVANS-DVRV 105 (530)
T ss_dssp -CCEECTTSTTHHHHT--CCSCTTCC----CCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTCT-TCCE
T ss_pred CceEECCCCccHHHHH--hHhhhhcc----CCCCEEEecCCHHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccC-CCeE
Confidence 3468999999999875 35677774 489999999999999999999999999999999999999866543 2489
Q ss_pred EEEccCCcceEEcCCCCeEEEcCCCCHHHHHHHHHH-hCCCceecCCCCCcccccccCcCCccCCCccccCchHHhhhee
Q 009286 127 MIDMINFSQIDVDAEAKSAWVGAGATLGELYYKISE-KSKNLAFPAGICPTVAVGGHLSGGGFGYIMRKYGLGADQVIDA 205 (538)
Q Consensus 127 vIdl~~~~~i~id~~~~~v~v~~G~~~~~l~~~l~~-~g~~l~~~~g~~~~vgvgG~~~gGg~g~~~~~~G~~~d~v~~~ 205 (538)
+|||++||+|++|+++.+|+||+|++|.+|+++|.+ +| +.++.|.|++|||||+++|||+|+++++||+++|+|+++
T Consensus 106 vIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~ 183 (530)
T 2y3s_A 106 VMDMSRLSAVGFDEERGAFAVEAGATLGAVYKTLFRVWG--VTLPGGACPDVGAGGHILGGGYGPLSRMHGSIVDYLHAV 183 (530)
T ss_dssp EEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHHS--CCCCCCSCTTCBHHHHHHTTCCCTTHHHHCCGGGGEEEE
T ss_pred EEEcccCCCEEEcCCCCEEEEeCCCCHHHHHHHHHhhcC--eEEeCCCCCCCCcCCCcCCCCCCcccccccchhhheeeE
Confidence 999999999999999999999999999999999985 77 678899999999999999999999999999999999999
Q ss_pred EEee--cCceeee---ccC-CCcc--hhHHhhccCCCCeEEEEEEEEEE------------EecCC-eEEEEEEecchh-
Q 009286 206 HLVD--VNGRILD---RKS-MGED--LFWAIRGGGAASFGVLVAWKVNL------------VDVPS-IVTVFTVQKTLE- 263 (538)
Q Consensus 206 ~vV~--~~G~i~~---~~~-~~~d--lf~a~rG~~~g~~Givt~~~~k~------------~p~~~-~~~~~~~~~~~~- 263 (538)
|||+ ++|+++. +.. +++| ||||+||+++|+|||||+++||+ +|.|+ .+..+.+.|+..
T Consensus 184 evV~~d~~G~i~~v~~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 263 (530)
T 2y3s_A 184 EVVVVDASGDARTVIATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRTAEADVPPEPGRLLPRPPAEVLLNTTVWPWEG 263 (530)
T ss_dssp EEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECCCCSSCCSCGGGSSCCCCSEEEEEEEEEESTT
T ss_pred EEEEecCCCcEEEEeccccccCCChHHHHHHhcCCCCCcEEEEEEEEEeecccCccccccccCCCCceEEEEEEEecccc
Confidence 9999 4599742 332 4555 99999998668999999999999 99875 455556666432
Q ss_pred ---hhHHHHHHHHHHHHhc--CCcc----ceEEEEEeecCCCceEEEEEEEEEeCCccchHHHHHhhcc---c-CC-Ccc
Q 009286 264 ---QNASQIHHKWQQIAYD--LPKE----LVISAGLQSQKGKRALVATFSAVYLGGVDRLLPLMQERFP---E-LG-LVK 329 (538)
Q Consensus 264 ---~~~~~~~~~~~~~~~~--~p~~----~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~---~-l~-~~~ 329 (538)
+...++++.|+++... .|++ +...+.+.. .... .+.+...|.|+.++..+.+++++. . ++ +..
T Consensus 264 ~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~g~~~~~~~~l~p~~~~l~~~~g~~~~ 340 (530)
T 2y3s_A 264 LDEAAFARLVRNHGRWFEQNSGPDSPWCDLYSVLALTR-SQSG--ALAMTTQLDATGPDAEKRLETYLAAVSEGVGVQPH 340 (530)
T ss_dssp CCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEEC-GGGS--EEEEEEEEECCSTTHHHHHHHHHHHHHTTCSSCCE
T ss_pred cCHHHHHHHHHHHHHHhhhcCCCCcccceeEEEEEecc-CCCC--cEEEEEEEeCCHHHHHHHHHHHHHHHHhhcCCCcc
Confidence 2345778888887654 4554 233333321 1112 244556788988777666665332 1 23 223
Q ss_pred ccceecchHHHHHHhhhhhccccchhhhhhccccccccceeeccccccCCCCHHHHHHHHHHHHhcC--CceEEEEEEec
Q 009286 330 EDCQEMSWVESTVYHFAFEIRASKNLELLLDRVNYTKYYLKAKSDYVREPIPVEVLEGMYEILYEEG--GHNIYVISFPY 407 (538)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~--~~~~~i~~~~~ 407 (538)
..+..++|.+.... +. ....+ . . ..+++.++.++.++++.+.++.+++.+...+ ...+.+.++++
T Consensus 341 ~~~~~~~~~~~~~~-~~-~~~~~--------~--~-~~r~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 407 (530)
T 2y3s_A 341 SDTRRLPWLHSTRW-PG-IAGDG--------D--M-TGRAKIKAAYARRSFDDRQIGTLYTRLTSTDYDNPAGVVALIAY 407 (530)
T ss_dssp EEEEEEEHHHHTTC-HH-HHCCC--------C--C-CSEEEEEEEEESSCCCHHHHHHHHHHHHCSSSCCTTCEEEEEEC
T ss_pred ceeeeccHHHHHHh-hc-CCCCC--------c--c-cccceeeccccccCCCHHHHHHHHHHHHhcCCCCCceEEEEEec
Confidence 44566788774332 11 10000 0 0 1245667777777788899999999887532 22467889999
Q ss_pred CCccCCCCCCCCCCccCCCceEEEEEEEeCCchhhHHHHHHHHHHHHHcCccccC------CCCcccccCCCccccCCCC
Q 009286 408 GGRLNEIPETEIAFPHRTNKFHMMYFAAWSDGEESQKVLELDRKLYEYMTPYVTK------NPRATYFNCKDIEIGRNNY 481 (538)
Q Consensus 408 GGai~~v~~~~tAf~~R~~~~~i~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~Y~Ny~d~~~~~~~~ 481 (538)
||++++++.++|||+||+..|++++...|.+++.++...+|++++++.+.+.... ...++|+||+|.+++.+..
T Consensus 408 GGav~~~~~~~ta~~~R~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~l~~~~~g~p~~~~~~~g~Y~Ny~d~~~~~~~~ 487 (530)
T 2y3s_A 408 GGKVNAVPADRTAVAQRDSILKIVYVTTWEDPAQDPVHVRWIRELYRDVYADTGGVPVPGGAADGAYVNYPDVDLADEEW 487 (530)
T ss_dssp CGGGGGSCTTSSSCCCCSCSEEEEEEEEECCTTCHHHHHHHHHHHHHHHTGGGTTSCCTTTTBCCCCTTSCCGGGGCTTT
T ss_pred CCccccCCCCcCcccccccceeEEEEEecCCCcchHHHHHHHHHHHHHHHhhhcCCCcccCCCCceEeCCcCcccccccc
Confidence 9999999999999999999999999999998888889999999999999733211 1357999999998762111
Q ss_pred CCCccchhhhhhhHHhhhcccHHHHHHhhhccCCCCCcccCCCCCCC
Q 009286 482 GNNYTSVKEASIWGKKYFKNNFYRLVDVKTKVDPGNFFRNEQSIPSR 528 (538)
Q Consensus 482 ~~~~~~~~~~~~~~~~Yyg~n~~RL~~IK~kyDP~nvF~~~qsI~~~ 528 (538)
+++. ..|++.|||+||+||++||+||||+|+|+++|+|+|+
T Consensus 488 ---~~s~---~~~~~~yyg~n~~RL~~iK~kyDP~nvF~~~q~I~p~ 528 (530)
T 2y3s_A 488 ---NTSG---VPWSELYYKDAYPRLQAVKARWDPRNVFRHALSVRVP 528 (530)
T ss_dssp ---CCSS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred ---ccch---hHHHHHHHHHHHHHHHHHHHHhCchhhcCCCCCCCCC
Confidence 1111 2399999999999999999999999999999999986
No 9
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=3.1e-67 Score=566.88 Aligned_cols=459 Identities=21% Similarity=0.385 Sum_probs=361.3
Q ss_pred CchhHHhhhhcCCCCCCCcceEEcCCCcchHHHHhhcccccCCCCCCCCCCcEEEecCCHHHHHHHHHHHHHCCCeEEEE
Q 009286 29 TNEKFLQCLSVHSERTFISKVTYTQNNSSYISILNSLKQNLLYKPPEYGRPQVIVTPFDVSQIQAVLKCAQKHDLLVKVR 108 (538)
Q Consensus 29 ~~~~~~~c~~~~~~~~~~~~~~~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ 108 (538)
..+.|..|+.... ..+++|+++.|+... .+|+.+....|.+|++|+|++||+++|++|+++++|+.+|
T Consensus 5 ~~~~l~~~l~~~~------~~~~~~~~~~y~~~~------~~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ 72 (503)
T 1zr6_A 5 EFNSINACLAAAD------VEFHEEDSEGWDMDG------TAFNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQISAK 72 (503)
T ss_dssp TTCHHHHHHHHTT------CEECCTTSHHHHHHT------SCSBGGGCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHhhCcCC------ceecCCCccchHHHh------hhhhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEE
Confidence 3467889998642 357889999998752 2465555579999999999999999999999999999999
Q ss_pred eCCCCCCCCccccCCCeEEEEccCCcceEEcCCCCeEEEcCCCCHHHHHHHHHHhCCCceecCCCCCcccccccCcCCcc
Q 009286 109 SGGHDHEGLSYLSEVPFVMIDMINFSQIDVDAEAKSAWVGAGATLGELYYKISEKSKNLAFPAGICPTVAVGGHLSGGGF 188 (538)
Q Consensus 109 ggGh~~~g~~~~~~~~givIdl~~~~~i~id~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~gGg~ 188 (538)
|||||+.+.+.+..+++++|||++||+|++| ++++|+||+|+++.+|+++|.+++ ++.+|.|.|+++||||+++|||+
T Consensus 73 ggGh~~~~~~~~~~~~gvvIdl~~l~~i~~d-~~~~v~v~aG~~~~~l~~~l~~~~-gl~~~~G~~~~vgvgG~~~gGg~ 150 (503)
T 1zr6_A 73 GGGHSYGSYGFGGEDGHLMLELDRMYRVSVD-DNNVATIQGGARLGYTALELLDQG-NRALSHGTCPAVGVGGHVLGGGY 150 (503)
T ss_dssp SSCCCTTCTTTTSSSSCEEEECTTCCCEEEC-TTSCEEEETTCBHHHHHHHHHHTT-SEECCCCSCTTSBHHHHHHHCCC
T ss_pred CCCcCCCCCcccCCCCcEEEECccCCCEEEC-CCCeEEEecCCCHHHHHHHHHHcC-CEEeCCCCCCcCchhhhhcCCCC
Confidence 9999999866542234899999999999999 889999999999999999997775 47889999999999999999999
Q ss_pred CCCccccCchHHhhheeEEeecCceeee-ccCCCcchhHHhhccCCCCeEEEEEEEEEEEecCCeEEEEEEecch-hhhH
Q 009286 189 GYIMRKYGLGADQVIDAHLVDVNGRILD-RKSMGEDLFWAIRGGGAASFGVLVAWKVNLVDVPSIVTVFTVQKTL-EQNA 266 (538)
Q Consensus 189 g~~~~~~G~~~d~v~~~~vV~~~G~i~~-~~~~~~dlf~a~rG~~~g~~Givt~~~~k~~p~~~~~~~~~~~~~~-~~~~ 266 (538)
|+++++||+++|+|+++|||++||++++ +..+|+|||||+|||+ |+|||||+++||++|.|+....+.+.+.. .+++
T Consensus 151 g~~s~~~G~~~D~v~~~~vV~a~G~i~~~~~~~~~dL~~a~rG~~-g~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~~~ 229 (503)
T 1zr6_A 151 GFATHTHGLTLDWLIGATVVLADASIVHVSETENADLFWALRGGG-GGFAIVSEFEFNTFEAPEIITTYQVTTTWNRKQH 229 (503)
T ss_dssp STTHHHHCCGGGGEEEEEEECTTSCEEEEBTTBSHHHHHHHTTCC-SSSCEEEEEEECCEECCSCEEEEEEEECCCHHHH
T ss_pred CcccccccChhheEEEEEEEecCCCEEEeCCCCCccHHHHHhccC-CCcEEEEEEEEEEEecCceeEEEEEEEeCCHHHH
Confidence 9999999999999999999999999997 6667899999999999 79999999999999999877666666644 3446
Q ss_pred HHHHHHHHHHHhc-CCccceEEEEEeecCCCceEEEEEEEEEeCCccchHHHHHhhcccCCC--ccccceecchHHHHHH
Q 009286 267 SQIHHKWQQIAYD-LPKELVISAGLQSQKGKRALVATFSAVYLGGVDRLLPLMQERFPELGL--VKEDCQEMSWVESTVY 343 (538)
Q Consensus 267 ~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~--~~~~~~~~~~~~~~~~ 343 (538)
.+++++|+++... +|+++...+.+.. . .+.+..+|+|+.++..+.+++++..++. ....+..++|.+....
T Consensus 230 ~~~~~~~~~~~~~~~p~~~~~~~~~~~----~--~~~~~~~~~g~~~~~~~~l~pl~~~~~~~~~~~~~~~~~~~~~~~~ 303 (503)
T 1zr6_A 230 VAGLKALQDWAQNTMPRELSMRLEINA----N--ALNWEGNFFGNAKDLKKILQPIMKKAGGKSTISKLVETDWYGQINT 303 (503)
T ss_dssp HHHHHHHHHHHHHTCCTTBCCEEEEET----T--EEEEEEEESSCHHHHHHHHHHHHHHTTSCEEEEEEEEECHHHHHTT
T ss_pred HHHHHHHHHHHhhcCChhHEEEEEEeC----C--eEEEEEEEECCHHHHHHHHHHHHHhcCcCCCcCceeeCCHHHHHHH
Confidence 7889999998876 8888887766642 1 4566778999998888877765443433 1234556778764322
Q ss_pred hhhhhccccchhhhhhccccccccceeeccccccCCCCHHHHHHHHHHHH-hcCC---ceEEEEEEecCC---ccCCCCC
Q 009286 344 HFAFEIRASKNLELLLDRVNYTKYYLKAKSDYVREPIPVEVLEGMYEILY-EEGG---HNIYVISFPYGG---RLNEIPE 416 (538)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~-~~~~---~~~~i~~~~~GG---ai~~v~~ 416 (538)
+. + +..... ......+..++.++.+..+ ++.+.++.+++.+. ..+. ..+.+.++++|| ++++++.
T Consensus 304 -~~-~---~~~~~~--~~p~g~~~~~~~~s~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~av~~~~~ 375 (503)
T 1zr6_A 304 -YL-Y---GADLNI--TYNYDVHEYFYANSLTAPR-LSDEAIQAFVDYKFDNSSVRPGRGWWIQWDFHGGKNSALAAVSN 375 (503)
T ss_dssp -SC-T---TCCSSC--SSCCCCCBCEEEEEEEESS-CCHHHHHHHHHHHHHSCCCCTTEEEEEEEEECCSTTCSGGGSCT
T ss_pred -Hc-C---CCcccc--cCCCCccccceecccchhh-CCHHHHHHHHHHHHhhCCCCCCcceEEEEEEcCCchhhhcCCCc
Confidence 11 0 000000 0001112346677777766 88889999999887 4322 235688899999 8889999
Q ss_pred CCCCCccCCCceEEEEEEEe-----CCchhhHHHHHHHHHHHHHcCccccCCCCcccccCCCccccCCCCCCCccchhhh
Q 009286 417 TEIAFPHRTNKFHMMYFAAW-----SDGEESQKVLELDRKLYEYMTPYVTKNPRATYFNCKDIEIGRNNYGNNYTSVKEA 491 (538)
Q Consensus 417 ~~tAf~~R~~~~~i~~~~~W-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~Ny~d~~~~~~~~~~~~~~~~~~ 491 (538)
++++|+||+..|++++...| .+++.++...+|++++.+.+.........++|+||+|.+++.
T Consensus 376 ~~ta~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~Y~Nyad~~~~~------------- 442 (503)
T 1zr6_A 376 DETAYAHRDQLWLWQFYDSIYDYENNTSPYPESGFEFMQGFVATIEDTLPEDRKGKYFNYADTTLTK------------- 442 (503)
T ss_dssp TTSSCCCTTCSEEEEEEEEETTTTTCCTTTTTSCHHHHHHHHHHHHTTSCGGGCBCCGGGCCTTCCH-------------
T ss_pred ccCCcccccceeEEEEEeeeccccCCCccchHHHHHHHHHHHHHHHhhCCCCCCceeccCCCccccc-------------
Confidence 99999999999999887777 344445556778887777666543211247999999987641
Q ss_pred hhhHHhhhcccHHHHHHhhhccCCCCCcccCCCCCCCC
Q 009286 492 SIWGKKYFKNNFYRLVDVKTKVDPGNFFRNEQSIPSRI 529 (538)
Q Consensus 492 ~~~~~~Yyg~n~~RL~~IK~kyDP~nvF~~~qsI~~~~ 529 (538)
..|++.|||+||+||++||+||||+|+|+++|+|+|..
T Consensus 443 ~~~~~~~yG~n~~RL~~iK~kyDP~~vF~~~~~i~~~~ 480 (503)
T 1zr6_A 443 EEAQKLYWRGNLEKLQAIKAKYDPEDVFGNVVSVEPIA 480 (503)
T ss_dssp HHHHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCCC
T ss_pred chHHHHHHHhHHHHHHHHHHHhCchhhcCCCCCCCchh
Confidence 25999999999999999999999999999999999864
No 10
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=1.6e-64 Score=541.06 Aligned_cols=435 Identities=22% Similarity=0.308 Sum_probs=337.3
Q ss_pred cceEEcCCCcchHHHHhhcccccCCCCCCCCCCcEEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCccccCCCeE
Q 009286 47 SKVTYTQNNSSYISILNSLKQNLLYKPPEYGRPQVIVTPFDVSQIQAVLKCAQKHDLLVKVRSGGHDHEGLSYLSEVPFV 126 (538)
Q Consensus 47 ~~~~~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~gi 126 (538)
.+.|++|+|+.|++... +|+......|.+|++|+|++||+++|++|+++++|+.+||||||+.+.+... +++
T Consensus 13 ~~~v~~p~~~~y~~~~~------~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~~~--~gv 84 (459)
T 2bvf_A 13 QGEVIYPDDSGFDAIAN------IWDGRHLQRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYATND--GGI 84 (459)
T ss_dssp SSEEECTTSTTHHHHHC------CSCTTCCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTCCS--SSE
T ss_pred CceEECCCCccHHHHHH------HhhhhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCccccC--CeE
Confidence 57899999999998532 4666666799999999999999999999999999999999999999877543 389
Q ss_pred EEEccCCcceEEcCCCCeEEEcCCCCHHHHHHHHHHhCCCceecCCCCCcccccccCcCCccCCCccccCchHHhhheeE
Q 009286 127 MIDMINFSQIDVDAEAKSAWVGAGATLGELYYKISEKSKNLAFPAGICPTVAVGGHLSGGGFGYIMRKYGLGADQVIDAH 206 (538)
Q Consensus 127 vIdl~~~~~i~id~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~gGg~g~~~~~~G~~~d~v~~~~ 206 (538)
+|||++||+|++|+++.+|+||+|++|.+|+++|.++| +.+++|.|+.+||||+++|||+|+++++||+++|+|+++|
T Consensus 85 vi~l~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~G--l~~~~g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~~~~ 162 (459)
T 2bvf_A 85 VLDLRLMNSIHIDTAGSRARIGGGVISGDLVKEAAKFG--LAAVTGMHPKVGFCGLALNGGVGFLTPKYGLASDNILGAT 162 (459)
T ss_dssp EEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHTTT--EEECCCSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEEEEE
T ss_pred EEECCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHcC--CEecCCCCCCcccceeecCCCCccccccccCHhHhEEEEE
Confidence 99999999999999999999999999999999999987 7888999999999999999999999999999999999999
Q ss_pred EeecCceeee-ccCCCcchhHHhhccCCCCeEEEEEEEEEEEecCCeEEEEEEecchhhhHH--HHHHHHHHHHhcCCcc
Q 009286 207 LVDVNGRILD-RKSMGEDLFWAIRGGGAASFGVLVAWKVNLVDVPSIVTVFTVQKTLEQNAS--QIHHKWQQIAYDLPKE 283 (538)
Q Consensus 207 vV~~~G~i~~-~~~~~~dlf~a~rG~~~g~~Givt~~~~k~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~p~~ 283 (538)
||++||++++ +..+|+||||++|||+ |+|||||+++||++|.|+......+.|+.. .+. ++++.|+++....|+.
T Consensus 163 vV~~~G~i~~~~~~~~~dLf~a~rg~~-g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 240 (459)
T 2bvf_A 163 LVTATGDVIYCSDDERPELFWAVRGAG-PNFGVVTEVEVQLYELPRKMLAGFITWAPS-VSELAGLLTSLLDALNEMADH 240 (459)
T ss_dssp EECTTSCEEEEESSSSHHHHHHHHHHG-GGTCEEEEEEEEEEECCCCEEEEEEEECCC-HHHHHHHHHHHHHHHHHTTTT
T ss_pred EEcCCCeEEEeCCCCChhhHhHhhccC-CccEEEEEEEEEEEECCCcEEEEEEEechH-HhhHHHHHHHHHHHHHhCcHh
Confidence 9999999997 6667899999999998 899999999999999977666666666643 234 7888898888777777
Q ss_pred ceEEEEEeecCCCceEEEEEEEEEeCCccchHHHHHhhcccCC-CccccceecchHHHHHHhhhhhccccchhhhhhccc
Q 009286 284 LVISAGLQSQKGKRALVATFSAVYLGGVDRLLPLMQERFPELG-LVKEDCQEMSWVESTVYHFAFEIRASKNLELLLDRV 362 (538)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (538)
+...+.+. ........+.+...|.|+.++..+.++++ ..++ .....+..++|.+.... . . . .....
T Consensus 241 ~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~-~-------~-~~~~~ 307 (459)
T 2bvf_A 241 IYPSVFVG-VDENRAPSVTVCVGHLGGLDIAERDIARL-RGLGRTVSDSIAVRSYDEVVAL--N-A-------E-VGSFE 307 (459)
T ss_dssp CCCEEEEE-ECTTCCEEEEEEEECCSCHHHHHHHHHHH-HTTSCCSEECCEEECHHHHHHH--H-H-------H-HSCCC
T ss_pred hccccccC-cccCCCceEEEEEEEeCCHHHHHHHHHHH-HHhCcchhcceeecCHHHHHhc--c-c-------c-cccCC
Confidence 74443221 11112234556667889887776666654 3343 22344566778763221 0 0 0 00000
Q ss_pred cccccceee-ccccccCCCCHHHHHHHHHHHHhcC-Cc-eEEEEEEecCCccCCCCCCCCCCccCCCceEEEEEEEeCCc
Q 009286 363 NYTKYYLKA-KSDYVREPIPVEVLEGMYEILYEEG-GH-NIYVISFPYGGRLNEIPETEIAFPHRTNKFHMMYFAAWSDG 439 (538)
Q Consensus 363 ~~~~~~~~~-~s~~~~~~~~~~~i~~~~~~~~~~~-~~-~~~i~~~~~GGai~~v~~~~tAf~~R~~~~~i~~~~~W~~~ 439 (538)
.. ...+.. ++.++.+.++.+.++.+++.+...+ .. .+. ++.+||++.+ .+.+||+||+..| +++...|.++
T Consensus 308 ~~-~~~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~gg~~~~--~~~ta~~~R~~~~-~~~~~~w~~~ 381 (459)
T 2bvf_A 308 DG-MSNLWIDREIAMPNARFAEAIAGNLDKFVSEPASGGSVK--LEIEGMPFGN--PKRTPARHRDAMG-VLALAEWSGA 381 (459)
T ss_dssp CS-CEEEEEEEEECSCHHHHHHHHHTTGGGCEEETTTTEEEE--EEEECCCCCC--TTCCSSCCCSSCE-EEEEEEECTT
T ss_pred CC-CcceEeccccccCCCCCHHHHHHHHHHHhhCCCCCceeE--EEEeCCccCC--CCCCCcccCCcce-EEEEEEeCCC
Confidence 11 112222 5666553355566666666654433 22 233 3344887776 6679999998888 8899999887
Q ss_pred h-hhHHHHHHHHHHHHHcCccccCCCCcccccCCCccccCCCCCCCccchhhhhhhHHhhhccc-HHHHHHhhhccCCCC
Q 009286 440 E-ESQKVLELDRKLYEYMTPYVTKNPRATYFNCKDIEIGRNNYGNNYTSVKEASIWGKKYFKNN-FYRLVDVKTKVDPGN 517 (538)
Q Consensus 440 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~~~Yyg~n-~~RL~~IK~kyDP~n 517 (538)
+ .++...+|++++++.+.++......|+|+||+|.+. ..|.+.|||+| |+||++||+||||+|
T Consensus 382 ~~~~~~~~~~~~~~~~~l~~~~~~p~~g~Y~N~~d~~~---------------~~~~~~~yG~~n~~rL~~iK~kyDP~~ 446 (459)
T 2bvf_A 382 APGSEKYPELARELDAALLRAGVTTSGFGLLNNNSEVT---------------AEMVAEVYKPEVYSRLAAVKREYDPEN 446 (459)
T ss_dssp STTTTHHHHHHHHHHHHHHHTTCEEEEECCGGGCSSCC---------------HHHHHHHHCHHHHHHHHHHHHHHCTTC
T ss_pred ccchHHHHHHHHHHHHHhcccccCCCCCeeeCCCCCcc---------------hHHHHHHhCcchHHHHHHHHHHhCccc
Confidence 6 777789999999999998752113579999999862 24899999986 999999999999999
Q ss_pred CcccCCCCCC
Q 009286 518 FFRNEQSIPS 527 (538)
Q Consensus 518 vF~~~qsI~~ 527 (538)
+|+++|+|+|
T Consensus 447 vF~~~~~I~p 456 (459)
T 2bvf_A 447 RFRHNYNIDP 456 (459)
T ss_dssp CCCSSSCCCC
T ss_pred ccCCCCCCCC
Confidence 9999999998
No 11
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=1.7e-40 Score=361.28 Aligned_cols=222 Identities=17% Similarity=0.233 Sum_probs=176.9
Q ss_pred CchhHHhhhhcCCCCCCCcceEEcCCCcchHHHHhhcccccCCCCCCCCCCcEEEecCCHHHHHHHHHHHHH--C-CCeE
Q 009286 29 TNEKFLQCLSVHSERTFISKVTYTQNNSSYISILNSLKQNLLYKPPEYGRPQVIVTPFDVSQIQAVLKCAQK--H-DLLV 105 (538)
Q Consensus 29 ~~~~~~~c~~~~~~~~~~~~~~~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~--~-~~~v 105 (538)
..+.+.+||..... .+.+.+ ++..+.. +...|+......|.+|++|+|++||+++|++|++ + ++|+
T Consensus 30 ~~~~~~~~l~~~~~----~~~v~~-~~~~~~~------~~~d~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~~v 98 (534)
T 1w1o_A 30 RGRPWPASLAALAL----DGKLRT-DSNATAA------ASTDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYTI 98 (534)
T ss_dssp ----------CTTT----TTCEEC-SHHHHHH------TSCCTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCCE
T ss_pred chHHHHHHHHhcCC----CceEec-CHHHHHH------HhccccccccCCCCEEEecCCHHHHHHHHHHHHhcCCCCceE
Confidence 55678888887332 345554 2223332 1234666566799999999999999999999998 6 9999
Q ss_pred EEEeCCCCCCCCccccCCCeEEEEccCCcce------EEcCCCCeEEEcCCCCHHHHHHHHHHhCCCceecC-CCCCccc
Q 009286 106 KVRSGGHDHEGLSYLSEVPFVMIDMINFSQI------DVDAEAKSAWVGAGATLGELYYKISEKSKNLAFPA-GICPTVA 178 (538)
Q Consensus 106 ~~~ggGh~~~g~~~~~~~~givIdl~~~~~i------~id~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~-g~~~~vg 178 (538)
.+||||||+.|.+.+.+ +++|||++||+| ++|+++.+|+||||++|.+|++++.++| +..+. +.+..++
T Consensus 99 ~~~G~G~~~~g~~~~~~--gvvi~l~~m~~i~~~~~~~~d~~~~~v~v~aGv~~~~l~~~~~~~G--l~~~~~~~~~~~t 174 (534)
T 1w1o_A 99 AFRGRGHSLMGQAFAPG--GVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARG--VAPRSWTDYLYLT 174 (534)
T ss_dssp EEESSCCCSSSTTCCTT--SEEEEGGGGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTT--EEESCCCSSCCSB
T ss_pred EEECCCCCCCCCcCCCC--eEEEECccccccccCccEEEcCCCCEEEECCCcCHHHHHHHHHHCC--CcccCCCCCCCEE
Confidence 99999999998877654 899999999985 8888889999999999999999999987 44444 3446789
Q ss_pred ccccCcCCccCCCccccCchHHhhheeEEeecCceeee-ccCCCcchhHHhhccCCCCeEEEEEEEEEEEecCCeEEEEE
Q 009286 179 VGGHLSGGGFGYIMRKYGLGADQVIDAHLVDVNGRILD-RKSMGEDLFWAIRGGGAASFGVLVAWKVNLVDVPSIVTVFT 257 (538)
Q Consensus 179 vgG~~~gGg~g~~~~~~G~~~d~v~~~~vV~~~G~i~~-~~~~~~dlf~a~rG~~~g~~Givt~~~~k~~p~~~~~~~~~ 257 (538)
|||.+++||.|.++++||.++|+|+++|||++||++++ +..+|+||||++|||+ |+|||||+++||++|.|+...++.
T Consensus 175 vGG~v~~~g~g~~~~~yG~~~d~v~~~evV~~dG~v~~~~~~~~~dL~~~~rGs~-G~~GIVt~~~l~l~p~~~~~~~~~ 253 (534)
T 1w1o_A 175 VGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGL-GQFGVITRARIAVEPAPARARWVR 253 (534)
T ss_dssp HHHHHTTCCCSTTHHHHCCGGGSEEEEEEEETTSCEEEEESSSSHHHHHHHTTCT-TCSEEEEEEEEEEEECCSEEEEEE
T ss_pred eceeccCCCccccccccccHhhhEEEEEEEeCCccEEEECCCCChhhHhhhcCCC-CCcEEEEEEEEEEEECCcceEEEE
Confidence 99999999999999999999999999999999999997 5567899999999998 899999999999999999776666
Q ss_pred EecchhhhH
Q 009286 258 VQKTLEQNA 266 (538)
Q Consensus 258 ~~~~~~~~~ 266 (538)
+.|...+.+
T Consensus 254 ~~~~~~~~~ 262 (534)
T 1w1o_A 254 FVYTDFAAF 262 (534)
T ss_dssp EEESCHHHH
T ss_pred EEeCCHHHH
Confidence 777543333
No 12
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=100.00 E-value=5.6e-36 Score=332.60 Aligned_cols=202 Identities=20% Similarity=0.189 Sum_probs=176.8
Q ss_pred CCCCCCCCCcEEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCcccc---CCCeEEEEccCCcce-EEcCCCCeEE
Q 009286 71 YKPPEYGRPQVIVTPFDVSQIQAVLKCAQKHDLLVKVRSGGHDHEGLSYLS---EVPFVMIDMINFSQI-DVDAEAKSAW 146 (538)
Q Consensus 71 ~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~---~~~givIdl~~~~~i-~id~~~~~v~ 146 (538)
|+......|.+||+|+|++||+++|++|+++++||++||||||+.|.+... ..++|+|||++||+| +||+++.+|+
T Consensus 198 ~~g~~~~~P~aVV~P~s~eeV~~iv~~A~~~~ipVvprGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~at 277 (658)
T 4bby_A 198 REGMFERIPDIVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAH 277 (658)
T ss_dssp HSSCCSCCCSEEEECCSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEE
T ss_pred hCCcccCCcCEEEeeCCHHHHHHHHHHHHHCCCeEEEECCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEE
Confidence 444455699999999999999999999999999999999999988655432 135799999999998 9999999999
Q ss_pred EcCCCCHHHHHHHHHHhCCCceecCCCCCcccccccCcCCccCCCccccCchHHhhheeEEeecCceeee-----ccCCC
Q 009286 147 VGAGATLGELYYKISEKSKNLAFPAGICPTVAVGGHLSGGGFGYIMRKYGLGADQVIDAHLVDVNGRILD-----RKSMG 221 (538)
Q Consensus 147 v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~gGg~g~~~~~~G~~~d~v~~~~vV~~~G~i~~-----~~~~~ 221 (538)
||||+++.+|.++|.++|+.+.+.+++...++|||++++++.|+.+.+||.+.|+|+++|||++||++++ ....+
T Consensus 278 VeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG~iAtna~G~~s~rYG~~~d~VlgleVVlpdG~i~~~~~~~k~~aG 357 (658)
T 4bby_A 278 VEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWISTRASGMKKNIYGNIEDLVVHMKVVTPRGVIEKSCQGPRMSTG 357 (658)
T ss_dssp EETTCBHHHHHHHHHHHTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEEECSCCCSSCCSS
T ss_pred EecCchHHHHHHHHHHcCCccCCCCCCccccEEeehhhcCCCCCCccCcCCHHHheeeEEEEeCCCcccccccccccCCC
Confidence 9999999999999999996555556777888999999999999999999999999999999999999985 23457
Q ss_pred cchhHHhhccCCCCeEEEEEEEEEEEecCCeEEEEEEecchhhhHHHHHHHH
Q 009286 222 EDLFWAIRGGGAASFGVLVAWKVNLVDVPSIVTVFTVQKTLEQNASQIHHKW 273 (538)
Q Consensus 222 ~dlf~a~rG~~~g~~Givt~~~~k~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (538)
+||+|+++|+. |+|||||+++||++|.|+....+.+.|+..+++.+++..+
T Consensus 358 yDL~~L~iGSE-GTLGIITeatLrL~P~P~~~~~~~~~f~d~~~a~~av~~i 408 (658)
T 4bby_A 358 PDIHHFIMGSE-GTLGVITEATIKIRPTPEYQKYGSVAFPNFEQGVACLREI 408 (658)
T ss_dssp SCTHHHHTTCT-TSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHH
T ss_pred cCHHHHhccCC-CcCcceeeeeeeeccCCccccccccccCCchhhhhhHHHH
Confidence 99999999999 9999999999999999998877777787655555555444
No 13
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=100.00 E-value=9.9e-35 Score=314.55 Aligned_cols=199 Identities=23% Similarity=0.290 Sum_probs=168.6
Q ss_pred CCCCCCCCCCcEEEecCCHHHHHHHHHHHHH-CCCeEEEEeCCCCCCCCccccCCCeEEEEccCCcceEEcC-----CC-
Q 009286 70 LYKPPEYGRPQVIVTPFDVSQIQAVLKCAQK-HDLLVKVRSGGHDHEGLSYLSEVPFVMIDMINFSQIDVDA-----EA- 142 (538)
Q Consensus 70 r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~-~~~~v~~~ggGh~~~g~~~~~~~~givIdl~~~~~i~id~-----~~- 142 (538)
.|+......|.+|++|+|++||+++|++|++ +++||++||||||+.|.+...+ +++|||++||+|++|. +.
T Consensus 53 d~~~~~~~~P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~g~~~~~~--gvvidl~~m~~i~i~~~~~~~~~~ 130 (524)
T 2exr_A 53 DFGGMNCVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSINGQAMAEG--GLVVDMSTTAENHFEVGYLSGGDA 130 (524)
T ss_dssp CTTCCCCCCCSEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSSSTTCCTT--SEEEEGGGGTTSCEEEEECCSSSS
T ss_pred cccccccCCCCEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCCCcccCCC--EEEEECcCCCCcEEeecccCCCCC
Confidence 3665556789999999999999999999996 9999999999999998776544 8999999999997776 55
Q ss_pred -CeEEEcCCCCHHHHHHHHH-HhCCCceec-CCCCCcccccccCcCCccCCCccccCchHHhhheeEEeecCceeee-cc
Q 009286 143 -KSAWVGAGATLGELYYKIS-EKSKNLAFP-AGICPTVAVGGHLSGGGFGYIMRKYGLGADQVIDAHLVDVNGRILD-RK 218 (538)
Q Consensus 143 -~~v~v~~G~~~~~l~~~l~-~~g~~l~~~-~g~~~~vgvgG~~~gGg~g~~~~~~G~~~d~v~~~~vV~~~G~i~~-~~ 218 (538)
.+|+||||+++.++++++. ++| +..+ .+.++.++|||+++++|.|..+.+||.++|+|++++||++||++++ ..
T Consensus 131 ~~~v~v~aGv~~~~l~~~~l~~~G--l~~~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d~V~~l~vV~~dG~v~~~~~ 208 (524)
T 2exr_A 131 TAFVDVSGGALWEDVLKRCVSEYG--LAPRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGNGDVVTCSE 208 (524)
T ss_dssp SEEEEEETTCBHHHHHHHHHHHHS--EECSCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGGSEEEEEEEETTSCEEEEES
T ss_pred ceEEEEeCCcCHHHHHHHHHHHcC--CCCCCCCcCCceeecccCCCCCCcccccccCcHhhhEEEEEEEecCCeEEEECC
Confidence 7999999999999866544 887 4422 2444678999999999999999999999999999999999999997 55
Q ss_pred CCCcchhHHhhccCCCCeEEEEEEEEEEEecCCeEEEEEEecchhhhHHHHHHHH
Q 009286 219 SMGEDLFWAIRGGGAASFGVLVAWKVNLVDVPSIVTVFTVQKTLEQNASQIHHKW 273 (538)
Q Consensus 219 ~~~~dlf~a~rG~~~g~~Givt~~~~k~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (538)
.+++||||++|||+ |+|||||+++||++|.|+...++.+.|...+++.+.+..+
T Consensus 209 ~~~~dL~~~~~Gs~-GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~~~~~~~~l 262 (524)
T 2exr_A 209 IENSELFFSVLGGL-GQFGIITRARVLLQPAPDMVRWIRVVYTEFDEFTQDAEWL 262 (524)
T ss_dssp SSSHHHHHHHTTCT-TSSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHHHHH
T ss_pred CCChhHHhHhhcCC-CccEEEEEEEEEEEEcCCeeEEEEEEeCCHHHHHHHHHHH
Confidence 57899999999998 9999999999999999997777777776544444444433
No 14
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.3e-34 Score=309.49 Aligned_cols=204 Identities=21% Similarity=0.280 Sum_probs=178.3
Q ss_pred CCCCCCCCCCcEEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCccccCCCeEEEEccCCcce-EEcCCCCeEEEc
Q 009286 70 LYKPPEYGRPQVIVTPFDVSQIQAVLKCAQKHDLLVKVRSGGHDHEGLSYLSEVPFVMIDMINFSQI-DVDAEAKSAWVG 148 (538)
Q Consensus 70 r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~givIdl~~~~~i-~id~~~~~v~v~ 148 (538)
.|+......|.+|++|+|++||+++|++|+++++|+++||||||+.|.+... .++++|||++||+| ++|+++.+++||
T Consensus 43 d~~~~~~~~p~~vv~P~s~eeV~~~v~~a~~~~~pv~~~GgGt~~~g~~~~~-~ggvvIdl~~m~~i~~id~~~~~v~V~ 121 (476)
T 3pm9_A 43 EERNLYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQGGNTGLVGGQTPH-NGEVVISLKRMDKIREIDTSSNTITVE 121 (476)
T ss_dssp CTTCCCBCCCSCEECCCSHHHHHHHHHHHHHHTCCEEEESSSCCSSSTTCCC-SSCEEEECTTCCCEEEEETTTTEEEEE
T ss_pred ccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCccCC-CCcEEEEeeCCCceEEEcCCCCeEEEC
Confidence 4765566799999999999999999999999999999999999999887763 24899999999999 899999999999
Q ss_pred CCCCHHHHHHHHHHhCCCceecCCCCCcccccccCcCCccCCCccccCchHHhhheeEEeecCceeee------ccCCCc
Q 009286 149 AGATLGELYYKISEKSKNLAFPAGICPTVAVGGHLSGGGFGYIMRKYGLGADQVIDAHLVDVNGRILD------RKSMGE 222 (538)
Q Consensus 149 ~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~gGg~g~~~~~~G~~~d~v~~~~vV~~~G~i~~------~~~~~~ 222 (538)
||++|.+|+++|.++|+.+.+..+.+..++|||++++++.|+.+.+||.++|+|++++||++||++++ ++..++
T Consensus 122 aGv~~~~l~~~l~~~Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~~yG~~~d~V~~levV~~dG~v~~~~~~~~k~~~g~ 201 (476)
T 3pm9_A 122 AGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLARDMALGVEVVLADGRVMNLLSKLKKDNTGY 201 (476)
T ss_dssp TTCBHHHHHHHHHHTTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEECTTSCEEECCCCCSCCCSSC
T ss_pred CCcCHHHHHHHHHHhCCccCCCCCCCCcEEEccccCCCCCCCcccccCcHHHheeEEEEEccCCeEEEcCCcccCCCCCc
Confidence 99999999999999984333345667788999999999999999999999999999999999999996 233578
Q ss_pred chhHHhhccCCCCeEEEEEEEEEEEecCCeEEEEEEecchhhhHHHHHHHHHH
Q 009286 223 DLFWAIRGGGAASFGVLVAWKVNLVDVPSIVTVFTVQKTLEQNASQIHHKWQQ 275 (538)
Q Consensus 223 dlf~a~rG~~~g~~Givt~~~~k~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (538)
||+|+++|++ |+|||||+++||++|.|+....+.+.|+..+++.+++..++.
T Consensus 202 dl~~l~~Gs~-GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~~ 253 (476)
T 3pm9_A 202 DLRDLFIGAE-GTLGIITAATLKLFPKPRAVETAFVGLQSPDDALKLLGIAQG 253 (476)
T ss_dssp CCHHHHTTST-TSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHHHHHHHHH
T ss_pred CHHHHhccCC-CCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHHHHHHHHH
Confidence 9999999998 899999999999999999777777777765666666666654
No 15
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=100.00 E-value=2.1e-32 Score=292.58 Aligned_cols=179 Identities=18% Similarity=0.218 Sum_probs=159.4
Q ss_pred CCCCCCCCCCcEEEecCCHHHHHHHHHHHHHC--CCeEEEEeCCCCCCCCccccCCCeEEEEccCCcce-EEcCCCCeEE
Q 009286 70 LYKPPEYGRPQVIVTPFDVSQIQAVLKCAQKH--DLLVKVRSGGHDHEGLSYLSEVPFVMIDMINFSQI-DVDAEAKSAW 146 (538)
Q Consensus 70 r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~--~~~v~~~ggGh~~~g~~~~~~~~givIdl~~~~~i-~id~~~~~v~ 146 (538)
+|.. ....|.+|++|+|++||+++|++|+++ ++|+.++|+|||+.+.+... ++++|||++||+| ++|+++++|+
T Consensus 35 ~W~~-~~~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~G~G~s~~~~~~~~--~gvvIdl~~l~~i~~~d~~~~~v~ 111 (481)
T 4feh_A 35 GWGR-TAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGDNAQNG--GGLVIDMTPLNTIHSIDADTKLVD 111 (481)
T ss_dssp CTTC-CSCEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEECSSCSSSSTTCCT--TSEEEECTTCCCEEEEETTTTEEE
T ss_pred cccC-CCCCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEEeCCcCCCCCCCCc--CeEEEECccCCCceEEcCCCCEEE
Confidence 4854 478999999999999999999999999 79999999999997665433 3899999999999 9999999999
Q ss_pred EcCCCCHHHHHHHHHHhCCCceecCCCCCcccccccCcCCccCCCccccCchHHhhheeEEeecCceeee-ccC-CCcch
Q 009286 147 VGAGATLGELYYKISEKSKNLAFPAGICPTVAVGGHLSGGGFGYIMRKYGLGADQVIDAHLVDVNGRILD-RKS-MGEDL 224 (538)
Q Consensus 147 v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~gGg~g~~~~~~G~~~d~v~~~~vV~~~G~i~~-~~~-~~~dl 224 (538)
||||+++.+|+++|.++|+.+...+|. +.++|||.+++|++|..+..||.++|+|++++||++||++++ +.. +|+||
T Consensus 112 v~aGv~l~~L~~~l~~~Gl~l~~~~g~-~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~~s~~~~~~dL 190 (481)
T 4feh_A 112 IDAGVNLDQLMKAALPFGLWVPVLPGT-RQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHLTPTGEDAEL 190 (481)
T ss_dssp EETTCBHHHHHHHHGGGTEECSCCCSC-SCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEEECSSSTTHHH
T ss_pred EcCCccHHHHHHHHHHcCCEEEEeCCc-CccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEEeCCCCCChHH
Confidence 999999999999999998433222344 577899999999999999999999999999999999999998 555 78999
Q ss_pred hHHhhccCCCCeEEEEEEEEEEEecCCeE
Q 009286 225 FWAIRGGGAASFGVLVAWKVNLVDVPSIV 253 (538)
Q Consensus 225 f~a~rG~~~g~~Givt~~~~k~~p~~~~~ 253 (538)
||++|||. |++||||+++||++|.|+..
T Consensus 191 f~a~rgs~-G~~GIIt~~tl~l~p~~~~~ 218 (481)
T 4feh_A 191 FWATVGGN-GLTGIIMRATIEMTPTSTAY 218 (481)
T ss_dssp HHHHTTCT-TTTCEEEEEEEECEECSCSE
T ss_pred HHHhhccC-CCceEEEEEEEEEEeCCccE
Confidence 99999998 89999999999999998644
No 16
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=100.00 E-value=2.7e-31 Score=280.98 Aligned_cols=176 Identities=19% Similarity=0.271 Sum_probs=156.4
Q ss_pred CCCCCCCCCCcEEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCccccCCCeEEEEccCCcce-EEcCCCCeEEEc
Q 009286 70 LYKPPEYGRPQVIVTPFDVSQIQAVLKCAQKHDLLVKVRSGGHDHEGLSYLSEVPFVMIDMINFSQI-DVDAEAKSAWVG 148 (538)
Q Consensus 70 r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~givIdl~~~~~i-~id~~~~~v~v~ 148 (538)
.|+......|.+|++|+|++||+++|++| +|+.++|||||+.+.+.. ..++++|||++||+| ++|+++++|+||
T Consensus 12 ~w~~~~~~~p~~v~~P~s~~ev~~~v~~a----~~v~~~G~G~s~~~~~~~-~~~g~vi~l~~l~~i~~~d~~~~~v~v~ 86 (422)
T 2vfr_A 12 NWAGNITYTAKELLRPHSLDALRALVADS----ARVRVLGSGHSFNEIAEP-GDGGVLLSLAGLPSVVDVDTAARTVRVG 86 (422)
T ss_dssp CSSSSCBCSCSSCBCCSSHHHHHHHHHHC----SSEEECSSCCCCSSTTCC-CTTCEEECSTTSCCCEEEETTTTEEEEE
T ss_pred cCCCCccCCCCEEEeCCCHHHHHHHHHhC----CCEEEEECCCCCCCCccC-CCCcEEEEhhhCCCcEEEcCCCCEEEEc
Confidence 38777778999999999999999999998 899999999999887763 234899999999998 999999999999
Q ss_pred CCCCHHHHHHHHHHhCCCceec-CCCCCcccccccCcCCccCCCccccCchHHhhheeEEeecCceeee-ccCCCcchhH
Q 009286 149 AGATLGELYYKISEKSKNLAFP-AGICPTVAVGGHLSGGGFGYIMRKYGLGADQVIDAHLVDVNGRILD-RKSMGEDLFW 226 (538)
Q Consensus 149 ~G~~~~~l~~~l~~~g~~l~~~-~g~~~~vgvgG~~~gGg~g~~~~~~G~~~d~v~~~~vV~~~G~i~~-~~~~~~dlf~ 226 (538)
||+++.+|.++|.++|+ .++ .+.++.++|||.+++|++|.. .+||.++|+|+++++|++||++++ +..+|+ ||
T Consensus 87 aG~~l~~l~~~l~~~Gl--~l~~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~~--f~ 161 (422)
T 2vfr_A 87 GGVRYAELARVVHARGL--ALPNMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVELVTADGSTVVIARGDER--FG 161 (422)
T ss_dssp TTCBHHHHHHHHHHTTE--ECSCCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEEECTTSCEEEEETTSTT--GG
T ss_pred CCCCHHHHHHHHHHcCC--cccCCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEEEeCCCCEEEeCCCCCC--cc
Confidence 99999999999999984 455 477788999999999999976 699999999999999999999997 444555 89
Q ss_pred HhhccCCCCeEEEEEEEEEEEecCCeEEEE
Q 009286 227 AIRGGGAASFGVLVAWKVNLVDVPSIVTVF 256 (538)
Q Consensus 227 a~rG~~~g~~Givt~~~~k~~p~~~~~~~~ 256 (538)
+++|+. |++||||+++||++|.|+.....
T Consensus 162 ~~~g~~-G~lGvit~~~l~l~p~~~~~~~~ 190 (422)
T 2vfr_A 162 GAVTSL-GALGVVTSLTLDLEPAYEMEQHV 190 (422)
T ss_dssp GTSSCT-TTTCEEEEEEEECEECCEEEEEE
T ss_pred eEEecC-CCCEEEEEEEEEEEecCceEEEE
Confidence 999998 89999999999999998855433
No 17
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=99.97 E-value=1.3e-31 Score=292.45 Aligned_cols=196 Identities=19% Similarity=0.232 Sum_probs=167.7
Q ss_pred CCCCcEEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCccccC--CCeEEEEccCCcce-EEcCCCCeEEEcCCCC
Q 009286 76 YGRPQVIVTPFDVSQIQAVLKCAQKHDLLVKVRSGGHDHEGLSYLSE--VPFVMIDMINFSQI-DVDAEAKSAWVGAGAT 152 (538)
Q Consensus 76 ~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~--~~givIdl~~~~~i-~id~~~~~v~v~~G~~ 152 (538)
...|.+|++|+|++||+++|++|+++++|++++|||||+.|.+.... +++++|||++||+| ++|+++.+|+||||++
T Consensus 135 ~~~p~~vv~P~s~eeV~~iv~~a~~~~~pv~~~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aGv~ 214 (584)
T 2uuu_A 135 KNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGIM 214 (584)
T ss_dssp CCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETTCB
T ss_pred CCCCCEEEeCCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCCCc
Confidence 45899999999999999999999999999999999999987665431 35899999999999 8999999999999999
Q ss_pred HHHHHHHHHHhCCCceecCCC--CCcccccccCcCCccCCCccccCchHHhhheeEEeecCceeee----ccCCCcchhH
Q 009286 153 LGELYYKISEKSKNLAFPAGI--CPTVAVGGHLSGGGFGYIMRKYGLGADQVIDAHLVDVNGRILD----RKSMGEDLFW 226 (538)
Q Consensus 153 ~~~l~~~l~~~g~~l~~~~g~--~~~vgvgG~~~gGg~g~~~~~~G~~~d~v~~~~vV~~~G~i~~----~~~~~~dlf~ 226 (538)
+.+|+++|.++|+ .++... ...++|||++++|+.|+.+.+||.++|+|+++|||++||++++ +...++||+|
T Consensus 215 ~~~l~~~l~~~Gl--~~~~~p~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~levVl~dG~i~~~~~~~~~~g~dl~~ 292 (584)
T 2uuu_A 215 GPELEKQLHKQGV--SLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRNGARSGAGINYKH 292 (584)
T ss_dssp HHHHHHHHHHTTE--ECCCCCTTGGGCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEECCC-------CCCTHH
T ss_pred HHHHHHHHHHcCC--eeCcCCCccCCeeEeeeccCCCCcccccCcCcHHHheeeEEEEeCCCCEEECCccccCCCcchhh
Confidence 9999999999984 444333 3457899999999999999999999999999999999999886 3456899999
Q ss_pred HhhccCCCCeEEEEEEEEEEEecCCeEEEEEEecchhhhHHHHHHHHH
Q 009286 227 AIRGGGAASFGVLVAWKVNLVDVPSIVTVFTVQKTLEQNASQIHHKWQ 274 (538)
Q Consensus 227 a~rG~~~g~~Givt~~~~k~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (538)
+++|++ |+|||||+++||++|.|+....+.+.|+..+++.+++..+.
T Consensus 293 ~~~Gse-GtlGIIT~~tlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 339 (584)
T 2uuu_A 293 IILGSE-GTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSALQQIR 339 (584)
T ss_dssp HHTTCT-TSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHHH
T ss_pred hhccCC-CCcEEEEEEEEEEEecccceEEEEEEcCCHHHHHHHHHHHH
Confidence 999998 89999999999999999977777777765444445554443
No 18
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=99.97 E-value=9.7e-30 Score=275.79 Aligned_cols=198 Identities=22% Similarity=0.297 Sum_probs=166.5
Q ss_pred CCCCcEEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCCCC-CCccccCCCeEEEEccCCcce-EEcCCCCeEEEcCCCCH
Q 009286 76 YGRPQVIVTPFDVSQIQAVLKCAQKHDLLVKVRSGGHDHE-GLSYLSEVPFVMIDMINFSQI-DVDAEAKSAWVGAGATL 153 (538)
Q Consensus 76 ~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~-g~~~~~~~~givIdl~~~~~i-~id~~~~~v~v~~G~~~ 153 (538)
...|.+|++|+|++||+++|++|+++++|++++|+|||+. |.+.....++++|||++||+| ++|+++.+|+||||+++
T Consensus 54 ~~~p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~g~G~~~~~g~~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aGv~~ 133 (520)
T 1wvf_A 54 AHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSAAPVQRGQVILDLKKMNKIIKIDPEMCYALVEPGVTF 133 (520)
T ss_dssp GGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTSCSSTTCEEEECTTCCCEEEEETTTTEEEECTTCCH
T ss_pred CCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCCCCCCCCeEEEECCCCCceEEECCCCCEEEECCCCCH
Confidence 4589999999999999999999999999999999999987 654431124899999999999 99999999999999999
Q ss_pred HHHHHHHHHhCCCceecCC---CCCcccccccCcCCccCCCccccCchHHhhheeEEeecCceeeec---cCCCcchhHH
Q 009286 154 GELYYKISEKSKNLAFPAG---ICPTVAVGGHLSGGGFGYIMRKYGLGADQVIDAHLVDVNGRILDR---KSMGEDLFWA 227 (538)
Q Consensus 154 ~~l~~~l~~~g~~l~~~~g---~~~~vgvgG~~~gGg~g~~~~~~G~~~d~v~~~~vV~~~G~i~~~---~~~~~dlf~a 227 (538)
.+|+++|.++|+ .++.+ ....+||||++++||.|.. +||.+.|+|+++|||++||++++. ..+++|+|++
T Consensus 134 ~~l~~~l~~~Gl--~~~~~~~p~~~~~~igG~~~~~g~g~~--~yG~~~d~v~~~evV~~dG~v~~~~~~~~~~~~l~~~ 209 (520)
T 1wvf_A 134 GQMYDYIQENNL--PVMLSFSAPSAIAGPVGNTMDRGVGYT--PYGEHFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQI 209 (520)
T ss_dssp HHHHHHHHHTTC--SEECCCCSSCTTCCHHHHHHTTCBCSS--TTCBGGGGEEEEEEECTTSCEEECGGGGSTTCSCTTT
T ss_pred HHHHHHHHHcCC--cccCCCCCCCCeeeeeecccCCCcCCc--cccchhhcEeeeEEEcCCCcEEEeCCCcCCCchhHhh
Confidence 999999999985 44433 2336889999989888875 999999999999999999999972 2467898777
Q ss_pred hhccCC---------CCeEEEEEEEEEEEecCCeEEEEEEecchhhhHHHHHHHHHHHH
Q 009286 228 IRGGGA---------ASFGVLVAWKVNLVDVPSIVTVFTVQKTLEQNASQIHHKWQQIA 277 (538)
Q Consensus 228 ~rG~~~---------g~~Givt~~~~k~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (538)
.+|+.+ ++|||||+++||++|.|+....+.+.|+..+++.++++.++++.
T Consensus 210 ~~~~~Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~~f~~~~~~~~~~~~~~~~~ 268 (520)
T 1wvf_A 210 FKWGYGPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFEDEADIVEIVDALRPLR 268 (520)
T ss_dssp CSCCSSCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEEEECCGGGHHHHHHHHHHHH
T ss_pred hcCCCCcchhhhccCCceEEEEEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHHHHHH
Confidence 777652 49999999999999999987777778876556666666666554
No 19
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.96 E-value=2.7e-29 Score=273.93 Aligned_cols=198 Identities=13% Similarity=0.121 Sum_probs=164.2
Q ss_pred ceEEcC-CCcchHHHHhhcccccCCCCCCCCCCcEEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCccccC---C
Q 009286 48 KVTYTQ-NNSSYISILNSLKQNLLYKPPEYGRPQVIVTPFDVSQIQAVLKCAQKHDLLVKVRSGGHDHEGLSYLSE---V 123 (538)
Q Consensus 48 ~~~~~p-~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~---~ 123 (538)
+.+++| +++.|++. ..+|+.+....|.+|++|+|++||+++|++|+++++|++++|+|||+.+.+...+ .
T Consensus 10 ~~~~~p~~~~~y~~~------~~~w~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~v~~~G~G~s~~~~~l~~~~~~~ 83 (561)
T 2i0k_A 10 TPPNFPNDIALFQQA------YQNWSKEIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANVE 83 (561)
T ss_dssp CCTTCCTTSCCEEEE------EECTTSSSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCCT
T ss_pred CceecCCCCHhHHHH------HhhhhhccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEECCCCCcccccccCCCcCC
Confidence 457778 99999864 2348877778999999999999999999999999999999999999976443221 2
Q ss_pred CeEEEEc-cCCcceEEcC--CCCeEEEcCCCCHHHHHHHHHHhCCCceecC-CCCCcccccccCcCCccCCC--------
Q 009286 124 PFVMIDM-INFSQIDVDA--EAKSAWVGAGATLGELYYKISEKSKNLAFPA-GICPTVAVGGHLSGGGFGYI-------- 191 (538)
Q Consensus 124 ~givIdl-~~~~~i~id~--~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~-g~~~~vgvgG~~~gGg~g~~-------- 191 (538)
++++||| ++||+|++|+ ++++|+||||+++.+|+++|.++|+ .++. +..+.++|||.+++|++|.+
T Consensus 84 ~gvvIdl~~~l~~i~vd~~~~~~~v~v~aGv~l~~L~~~l~~~Gl--~l~~~~~~~~~TvGG~i~~~~~G~~l~~gG~~~ 161 (561)
T 2i0k_A 84 KVILADTMTHLNGITVNTGGPVATVTAGAGASIEAIVTELQKHDL--GWANLPAPGVLSIGGALAVNAHGAALPAVGQTT 161 (561)
T ss_dssp TEEEEECTTTSCCEEEECCSSSCEEEEETTSBHHHHHHHHHHTTE--ECSSCCSCTTCBHHHHHHTTCCCSCCCCTTCCC
T ss_pred CeEEEechhhCCceEecCcCCccEEEEcCCCCHHHHHHHHHHcCC--cccccCCCCCcccCCCcccCCcccccccCCccc
Confidence 4899999 8999999998 8899999999999999999999984 4443 22356788888877777765
Q ss_pred --ccccCchHHhhheeEEeecCce---eeeccCCCcchhHHhhccCCCCeEEEEEEEEEEEecCCeEEEE
Q 009286 192 --MRKYGLGADQVIDAHLVDVNGR---ILDRKSMGEDLFWAIRGGGAASFGVLVAWKVNLVDVPSIVTVF 256 (538)
Q Consensus 192 --~~~~G~~~d~v~~~~vV~~~G~---i~~~~~~~~dlf~a~rG~~~g~~Givt~~~~k~~p~~~~~~~~ 256 (538)
+.+||.++|+|+++|||++||+ +++...+++||+|+++|.| . ||||++|||++|.++.....
T Consensus 162 ~s~~~~G~~~d~V~~~evV~~dG~~~~~~~~~~~~~dl~~a~~g~G--~-giIt~~tl~l~p~~~~~~~~ 228 (561)
T 2i0k_A 162 LPGHTYGSLSNLVTELTAVVWNGTTYALETYQRNDPRITPLLTNLG--R-CFLTSVTMQAGPNFRQRCQS 228 (561)
T ss_dssp CTTCCSSCGGGGEEEEEEEEECSSSEEEEEEETTSGGGHHHHSCTT--S-SCEEEEEEECEECCEEEEEE
T ss_pred ccccccccHhheEEEEEEEeCCCCEEEeeeccCCCccHHHHHhcCC--C-EEEEEEEEEEEECCceEEEE
Confidence 6689999999999999999999 6653334799999998654 3 89999999999998754443
No 20
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.96 E-value=4.3e-28 Score=264.74 Aligned_cols=201 Identities=18% Similarity=0.185 Sum_probs=164.4
Q ss_pred CCCCCcEEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCCCC-CCccccCCCeEEEEc-cCCcce-EEcCCCCeEEEcCCC
Q 009286 75 EYGRPQVIVTPFDVSQIQAVLKCAQKHDLLVKVRSGGHDHE-GLSYLSEVPFVMIDM-INFSQI-DVDAEAKSAWVGAGA 151 (538)
Q Consensus 75 ~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~-g~~~~~~~~givIdl-~~~~~i-~id~~~~~v~v~~G~ 151 (538)
....|.+|++|+|++||+++|++|+++++||++||+|||+. |.+.....++++||| ++||+| ++|+++.+|+||||+
T Consensus 67 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~g~Gt~~~~gg~~p~~~~gvvidl~~~mn~il~id~~~~~v~v~aGv 146 (560)
T 1e8g_A 67 DYFLASAIVAPRNVADVQSIVGLANKFSFPLWPISIGRNSGYGGAAPRVSGSVVLDMGKNMNRVLEVNVEGAYCVVEPGV 146 (560)
T ss_dssp TSSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTCCSSTTCEEEECTTTCCCEEEEETTTTEEEECTTC
T ss_pred cccCCcEEEeCCCHHHHHHHHHHHHHcCCcEEEecCCCcCCcCCCCCCcCCEEEEEchHhcCCeEEEcCCCCEEEEeCCC
Confidence 34589999999999999999999999999999999999986 554431124899999 999999 999999999999999
Q ss_pred CHHHHHHHHHHhCCC--ceecCCCCCcccccccCcCCccCCCccccCchHHhhheeEEeecCceeee-cc--CCCc----
Q 009286 152 TLGELYYKISEKSKN--LAFPAGICPTVAVGGHLSGGGFGYIMRKYGLGADQVIDAHLVDVNGRILD-RK--SMGE---- 222 (538)
Q Consensus 152 ~~~~l~~~l~~~g~~--l~~~~g~~~~vgvgG~~~gGg~g~~~~~~G~~~d~v~~~~vV~~~G~i~~-~~--~~~~---- 222 (538)
++.+|.++|.++|+. +.+.++.....||||.++++|.|+. +||..+|+|+++|||++||++++ .. ..++
T Consensus 147 ~~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~~g~g~~--~yG~~~d~v~~l~vVl~dG~v~~~~~~~~~~~~~~~ 224 (560)
T 1e8g_A 147 TYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVERGVGYT--PYGDHWMMHSGMEVVLANGELLRTGMGALPDPKRPE 224 (560)
T ss_dssp BHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHTTCBCSS--TTCBTGGGEEEEEEEETTSCEEECGGGGSCCCCCGG
T ss_pred CHHHHHHHHHHcCCccccCCCCCCCCccchhhhccCCCCCcc--cceeHHHheeeeEEEeCCCCEEEecCcccCcccccc
Confidence 999999999999864 3333344446789999988888864 99999999999999999999997 22 2231
Q ss_pred -----------chhHHhhcc----------CCCCeEEEEEEEEEEEecCCeEEEEEEecchhhhHHHHHHHHHHHH
Q 009286 223 -----------DLFWAIRGG----------GAASFGVLVAWKVNLVDVPSIVTVFTVQKTLEQNASQIHHKWQQIA 277 (538)
Q Consensus 223 -----------dlf~a~rG~----------~~g~~Givt~~~~k~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (538)
+++|+++++ .+|+|||||+++||++|.|+....+.+.|+..+++.+++..++++.
T Consensus 225 ~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~a~~~~~~~~~~~ 300 (560)
T 1e8g_A 225 TMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIWLMPNPGGYQSYLITLPKDGDLKQAVDIIRPLR 300 (560)
T ss_dssp GTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEEEEECEECCSCEEEEEEEECSTTHHHHHHHHHHHHH
T ss_pred cccchhhhhhhhcccccccccCCcchhcccccCcEEEEEEEEEEEEeCCCceEEEEEEcCCHHHHHHHHHHHHHHH
Confidence 566666543 1379999999999999999987778888876666666676666654
No 21
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.96 E-value=1.1e-28 Score=263.75 Aligned_cols=179 Identities=15% Similarity=0.160 Sum_probs=150.5
Q ss_pred CCCCCCCCCCcEEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCcccc---CCCeEEEEcc-CCcceEEcCC--CC
Q 009286 70 LYKPPEYGRPQVIVTPFDVSQIQAVLKCAQKHDLLVKVRSGGHDHEGLSYLS---EVPFVMIDMI-NFSQIDVDAE--AK 143 (538)
Q Consensus 70 r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~---~~~givIdl~-~~~~i~id~~--~~ 143 (538)
+|+......|.+|++|+|++||+++|++|+++++||+++|+|||+.+..... ..++++|||+ +||+|++|++ .+
T Consensus 21 nWs~~~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~GgGhs~~~l~~~gG~~~~~GVvIdls~~Ln~I~vD~~~~~~ 100 (540)
T 3js8_A 21 NWAGDIKVDDVWTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGVSCPAVVLLDTTRYLTAMSIDASGPVA 100 (540)
T ss_dssp CTTSCCEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTCSSCSEEEEETTTTCCCEEEECSSSSE
T ss_pred ccccccCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEEeCCCCcccccccCCCCCCCeEEEECcCcCCCEEECCCCCcc
Confidence 3888888899999999999999999999999999999999999986332211 1248999995 7999999985 58
Q ss_pred eEEEcCCCCHHHHHHHHHHhCCCceecC-CCCCcccccccCcCCccCCC----------ccccCchHHhhheeEEeecCc
Q 009286 144 SAWVGAGATLGELYYKISEKSKNLAFPA-GICPTVAVGGHLSGGGFGYI----------MRKYGLGADQVIDAHLVDVNG 212 (538)
Q Consensus 144 ~v~v~~G~~~~~l~~~l~~~g~~l~~~~-g~~~~vgvgG~~~gGg~g~~----------~~~~G~~~d~v~~~~vV~~~G 212 (538)
+|+||+|+++.+|+++|.++| +.++. +..+.++|||.+++|++|.. +.+||.++|+|++++||++||
T Consensus 101 tVtV~AGv~l~~L~~~L~~~G--L~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~~~D~V~~levV~adG 178 (540)
T 3js8_A 101 KVTAQAGITMEALLTGLEKAG--LGVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYGSISNLVLSLTAVVYDK 178 (540)
T ss_dssp EEEEETTSBHHHHHHHHHHTT--EECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSCGGGGEEEEEEEEEET
T ss_pred EEEEccCCCHHHHHHHHHHcC--CEEEecCCCCCeEEcccccCCCCcccccccccccccccccccHHHhEEEEEEEcCCC
Confidence 999999999999999999998 45552 33467899999999999886 589999999999999999999
Q ss_pred e-----eeeccCCCcchhHHhhccCCCCeEEEEEEEEEEEecCCeE
Q 009286 213 R-----ILDRKSMGEDLFWAIRGGGAASFGVLVAWKVNLVDVPSIV 253 (538)
Q Consensus 213 ~-----i~~~~~~~~dlf~a~rG~~~g~~Givt~~~~k~~p~~~~~ 253 (538)
+ +++.+.+++||| ++|+|. |. ||||+++||++|.+...
T Consensus 179 ~~~~~~i~~~s~~~~DL~-a~r~G~-G~-gIVTevtlrl~P~~~l~ 221 (540)
T 3js8_A 179 ASGAYALRKFARNDPQIA-PLLAHV-GR-SLIVEATLQAAPNQRLR 221 (540)
T ss_dssp TTTEEEEEEEETTSGGGH-HHHTCT-TS-SCEEEEEEEEEECCEEE
T ss_pred CCceeeEEEeCCCChhHH-HHHhcC-CC-eEEEEEEEEEEECCceE
Confidence 8 665334689984 556665 56 69999999999998744
No 22
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.95 E-value=1.7e-28 Score=266.22 Aligned_cols=194 Identities=14% Similarity=0.164 Sum_probs=164.2
Q ss_pred CCCCcEEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCccccCC----CeEEEEccCCcce-EEcCCCCeEEEcCC
Q 009286 76 YGRPQVIVTPFDVSQIQAVLKCAQKHDLLVKVRSGGHDHEGLSYLSEV----PFVMIDMINFSQI-DVDAEAKSAWVGAG 150 (538)
Q Consensus 76 ~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~----~givIdl~~~~~i-~id~~~~~v~v~~G 150 (538)
...|.+|++|+|++||+++|++|+++++||.++|||||+.|.+...+. ++++|||++||+| ++|+ .++|+||||
T Consensus 43 ~~~p~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~GgGt~~~G~~~~~~~~~~r~gvvIdl~rmn~I~~id~-~~~v~v~aG 121 (571)
T 1f0x_A 43 QGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLGK-GEQVLAYPG 121 (571)
T ss_dssp BBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTSCCBSCCSSCEEEEECTTCCCEEEETT-TTEEEECTT
T ss_pred CCCccEEEeeCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCccCCCcCCcCceEEEECcccCCceeECC-CCeEEEcCC
Confidence 468999999999999999999999999999999999999987766432 3899999999999 7994 579999999
Q ss_pred CCHHHHHHHHHHhCCCceecC---CCCCcccccccCcCCccCCCccccCchHH----------------hhheeEEeecC
Q 009286 151 ATLGELYYKISEKSKNLAFPA---GICPTVAVGGHLSGGGFGYIMRKYGLGAD----------------QVIDAHLVDVN 211 (538)
Q Consensus 151 ~~~~~l~~~l~~~g~~l~~~~---g~~~~vgvgG~~~gGg~g~~~~~~G~~~d----------------~v~~~~vV~~~ 211 (538)
+++.+|.++|.++|+ .++. +.|..++|||.++++++|..+.+||...| +|++++||++|
T Consensus 122 v~l~~L~~~l~~~Gl--~~p~~~g~s~~~~tvGG~ia~nagG~~~~~yG~~~d~~~~~~~~~~~~l~~~~vl~levVl~d 199 (571)
T 1f0x_A 122 TTLYSLEKALKPLGR--EPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGETP 199 (571)
T ss_dssp CBHHHHHHHHGGGTE--ECSCCCGGGGGTCBHHHHHHTTCCCSCTTSCSSCCSCEEEEEECTTSCEEEEECSSBCCCSSH
T ss_pred cCHHHHHHHHHhcCc--cCCcCCCccCCCceecccccCCCCcccccCCCchhhhhhhheeccCCceEEEEeeeEEEEcCC
Confidence 999999999999984 4432 34456689999999999999999999999 99999999999
Q ss_pred ceeee-c-----------------cCCCc-----------------chhHHh--hccCCCCeEEEEEEEEEEEecCCeEE
Q 009286 212 GRILD-R-----------------KSMGE-----------------DLFWAI--RGGGAASFGVLVAWKVNLVDVPSIVT 254 (538)
Q Consensus 212 G~i~~-~-----------------~~~~~-----------------dlf~a~--rG~~~g~~Givt~~~~k~~p~~~~~~ 254 (538)
|++++ . ...++ ||+|++ +|++ |+||| |+++||++|.|+...
T Consensus 200 G~i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~Dl~~l~~a~Gse-GtlGV-t~~tl~l~p~p~~~~ 277 (571)
T 1f0x_A 200 EQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCA-GKLAV-FAVRLDTFEAEKNQQ 277 (571)
T ss_dssp HHHHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTTCGGGCCSSTTCT-TSSEE-EEEEEECEECCSSCE
T ss_pred CcEEEecCccccccchhhhcccccccCCcccccccccccccccccccHHHHHHhcCCC-CceeE-EEEEEEEEecCCeEE
Confidence 99985 2 11223 998888 9998 89999 999999999998777
Q ss_pred EEEEecchhhhHHHHHHHHH
Q 009286 255 VFTVQKTLEQNASQIHHKWQ 274 (538)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~ 274 (538)
.+.+.++..+++.+++..+.
T Consensus 278 ~~~~~~~~~~~a~~~~~~~~ 297 (571)
T 1f0x_A 278 VFYIGTNQPEVLTEIRRHIL 297 (571)
T ss_dssp EEEEEESCHHHHHHHHHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHH
Confidence 77777765555555555554
No 23
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.91 E-value=6.8e-25 Score=222.10 Aligned_cols=164 Identities=19% Similarity=0.168 Sum_probs=131.9
Q ss_pred CCCCCcEEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCccccCCCeEEEEccCCcceEEcCCCCeEEEcCCCCHH
Q 009286 75 EYGRPQVIVTPFDVSQIQAVLKCAQKHDLLVKVRSGGHDHEGLSYLSEVPFVMIDMINFSQIDVDAEAKSAWVGAGATLG 154 (538)
Q Consensus 75 ~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~givIdl~~~~~i~id~~~~~v~v~~G~~~~ 154 (538)
....|.++++|+|++||+++|++|+++++|+.++|+|||+.+.+.+.+ +++|||++||+|++| ..+++||||++|.
T Consensus 51 igg~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGsnl~~~~~~~~--gvvI~l~~~~~I~~d--~~~v~v~aG~~~~ 126 (322)
T 3tx1_A 51 TGGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIKDGGIR--GVILHLDLLQTIERN--NTQIVAMSGAKLI 126 (322)
T ss_dssp CCCEEEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCTTEEECTTCEE--EEEEECTTCCCEEEE--TTEEEEETTSBHH
T ss_pred cCceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCccCCCcCCCCCC--eEEEECCCCCcEEEC--CCEEEEecCcCHH
Confidence 345899999999999999999999999999999999999886554333 899999999999875 4599999999999
Q ss_pred HHHHHHHHhCC-CceecCCCCCcccccccCcCCccCCCcccc-CchHHhhheeEEeecCceeeeccCCCcchhHHhhccC
Q 009286 155 ELYYKISEKSK-NLAFPAGICPTVAVGGHLSGGGFGYIMRKY-GLGADQVIDAHLVDVNGRILDRKSMGEDLFWAIRGGG 232 (538)
Q Consensus 155 ~l~~~l~~~g~-~l~~~~g~~~~vgvgG~~~gGg~g~~~~~~-G~~~d~v~~~~vV~~~G~i~~~~~~~~dlf~a~rG~~ 232 (538)
+|++++.++|+ ++.++.|.+.+ |||.+. ++++.| |.++|+|++++||++||++++.. .+|++|+||++.
T Consensus 127 ~l~~~l~~~Gl~Gle~~~giPgT--VGGav~-----~NaGgyGg~~~d~v~~vevV~~~G~i~~~~--~~~~~~~yR~s~ 197 (322)
T 3tx1_A 127 DTAKFALNESLSGLEFACGIPGS--IGGALH-----MNAGAYGGEISDVLEAATVLTQTGELKKLK--RSELKAAYRFST 197 (322)
T ss_dssp HHHHHHHHTTEESCGGGTTCCSB--HHHHHH-----HTCEETTEEHHHHEEEEEEECTTSCEEEEE--GGGCC--CC-CT
T ss_pred HHHHHHHHcCCcccccCCCCcch--hHHHHH-----hCccCcccchHhhEEEEEEEcCCCCEEEec--hHHcCcchhhcc
Confidence 99999999985 33355555443 334443 233335 79999999999999999999743 369999999886
Q ss_pred CC-CeEEEEEEEEEEEecCC
Q 009286 233 AA-SFGVLVAWKVNLVDVPS 251 (538)
Q Consensus 233 ~g-~~Givt~~~~k~~p~~~ 251 (538)
.+ .+||||+++||++|.|+
T Consensus 198 ~g~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 198 IAEKNYIVLDATFSLALEEK 217 (322)
T ss_dssp TTGGGCEEEEEEEECEECCH
T ss_pred cCCCCEEEEEEEEEEEeCCH
Confidence 44 57899999999999874
No 24
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.91 E-value=1.2e-24 Score=222.38 Aligned_cols=165 Identities=13% Similarity=0.052 Sum_probs=145.6
Q ss_pred CCCCCcEEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCccccCCCeEEEEccCCcceEEcC--CCCeEEEcCCCC
Q 009286 75 EYGRPQVIVTPFDVSQIQAVLKCAQKHDLLVKVRSGGHDHEGLSYLSEVPFVMIDMINFSQIDVDA--EAKSAWVGAGAT 152 (538)
Q Consensus 75 ~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~givIdl~~~~~i~id~--~~~~v~v~~G~~ 152 (538)
....|.++++|+|++||+++|++|+++++|+.++|+|||..+.+. .+ |++|+++ |++|+++. +..+++||+|++
T Consensus 27 igg~a~~vv~p~s~eel~~~v~~a~~~~ipv~vlGgGSNll~~d~-~~--GvVI~l~-~~~i~v~~~~~~~~v~v~AG~~ 102 (357)
T 3i99_A 27 IEQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTCH-YT--GMIVVNR-LNGIEHQQDDDYHRLHVAGGED 102 (357)
T ss_dssp CSCEEEEEEEECSHHHHHHHHSSSTTTTSCEEEESSCTTEEECSC-EE--EEEEEEC-CCCEEEEECSSEEEEEEETTSB
T ss_pred CCccceEEEEECCHHHHHHHHHHHHHcCCCEEEECCCcCcccCCC-CC--eEEEEcC-CCceEEeccCCceEEEEeCCCc
Confidence 345889999999999999999999999999999999999876654 44 8999998 99998753 456899999999
Q ss_pred HHHHHHHHHHhCCCceecCCCCCcccccccCcCCccCCCccccCc-hHHhhheeEEeec-CceeeeccCCCcchhHHhhc
Q 009286 153 LGELYYKISEKSKNLAFPAGICPTVAVGGHLSGGGFGYIMRKYGL-GADQVIDAHLVDV-NGRILDRKSMGEDLFWAIRG 230 (538)
Q Consensus 153 ~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~gGg~g~~~~~~G~-~~d~v~~~~vV~~-~G~i~~~~~~~~dlf~a~rG 230 (538)
|.+|.+++.++|+ .|.++.+||+| +.||+.+++++.||. +.|+|+++++|++ +|++++.. +.|++|+||+
T Consensus 103 ~~~l~~~a~~~Gl-----~GlE~l~gIPG-tVGGav~~NaGaYG~e~~d~v~~vevv~~~~G~i~~~~--~~dl~f~YR~ 174 (357)
T 3i99_A 103 WPSLVSWCVEQGI-----GGLENLALIPG-CAGSAPIQNIGAYGVEFKDVCDYVEYLCLETGTVKRLT--MEECQFGYRD 174 (357)
T ss_dssp HHHHHHHHHHTTC-----TTCGGGTTCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGCCBTTB
T ss_pred HHHHHHHHHHcCC-----cCccccCCCCc-hhHHHHHhchhhhhhhHHhhEeEEEEEECCCCcEEEEe--HHHcCccccc
Confidence 9999999999983 47888888988 679999999999997 9999999999999 99999743 3699999999
Q ss_pred cCC----CCeEEEEEEEEEEEecCC
Q 009286 231 GGA----ASFGVLVAWKVNLVDVPS 251 (538)
Q Consensus 231 ~~~----g~~Givt~~~~k~~p~~~ 251 (538)
+.. +++||||+++||++|.++
T Consensus 175 s~~~~~~g~~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 175 SIFKHQLYQKAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp CGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred ccCCCccCCCEEEEEEEEEEEeCCc
Confidence 864 379999999999999764
No 25
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.90 E-value=3.3e-24 Score=218.35 Aligned_cols=160 Identities=20% Similarity=0.243 Sum_probs=130.5
Q ss_pred CCCCCcEEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCccccCCCeEEEEccCCcceEEcCCCCeEEEcCCCCHH
Q 009286 75 EYGRPQVIVTPFDVSQIQAVLKCAQKHDLLVKVRSGGHDHEGLSYLSEVPFVMIDMINFSQIDVDAEAKSAWVGAGATLG 154 (538)
Q Consensus 75 ~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~givIdl~~~~~i~id~~~~~v~v~~G~~~~ 154 (538)
....|.+|++|+|++||+++|++|+++++|+.++|||||+.+.+.+.+ +++|||++||+|++| ..+++||||++|.
T Consensus 45 ~~~~p~~vv~P~s~eev~~~l~~a~~~~~pv~~~GgGtnl~~~~~~~~--gvvI~l~~m~~i~id--~~~v~v~aGv~~~ 120 (326)
T 1hsk_A 45 TGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGIR--GIVISLLSLDHIEVS--DDAIIAGSGAAII 120 (326)
T ss_dssp CCCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEECTTCEE--EEEEECTTCCCEEEE--TTEEEEETTSBHH
T ss_pred cCCcceEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCccccCCCCCC--eEEEEeCCCCceEEc--CCEEEEeCCCcHH
Confidence 345899999999999999999999999999999999999886655443 899999999999887 3799999999999
Q ss_pred HHHHHHHHhCC-CceecCCCCCcccccccCcCCccCCCccccC-chHHhhheeEEeecCceeeeccCCCcchhHHhhccC
Q 009286 155 ELYYKISEKSK-NLAFPAGICPTVAVGGHLSGGGFGYIMRKYG-LGADQVIDAHLVDVNGRILDRKSMGEDLFWAIRGGG 232 (538)
Q Consensus 155 ~l~~~l~~~g~-~l~~~~g~~~~vgvgG~~~gGg~g~~~~~~G-~~~d~v~~~~vV~~~G~i~~~~~~~~dlf~a~rG~~ 232 (538)
+|++++.++|+ ++.+.++... +|||.+..+ ++.|| .++|+|++++||++||++++... .|++|++|.+.
T Consensus 121 ~l~~~l~~~Gl~gLe~~~~~Pg--tvGG~i~~n-----aggyG~~~~d~v~~v~vv~~~G~i~~~~~--~~~~~gyr~~~ 191 (326)
T 1hsk_A 121 DVSRVARDYALTGLEFACGIPG--SIGGAVYMN-----AGAYGGEVKDCIDYALCVNEQGSLIKLTT--KELELDYRNSI 191 (326)
T ss_dssp HHHHHHHHTTEESCGGGTTCCS--BHHHHHHHT-----CEETTEEHHHHEEEEEEECTTSCEEEEET--TTTTCBTTBCH
T ss_pred HHHHHHHHCCCccccccCCCcc--hhhHHHhcc-----cccCchhhhhhEEEEEEEeCCCCEEEECh--HHcCCCccccc
Confidence 99999999985 2223333322 355555443 34488 99999999999999999997332 38899999742
Q ss_pred ---CCCeEEEEEEEEEEEec
Q 009286 233 ---AASFGVLVAWKVNLVDV 249 (538)
Q Consensus 233 ---~g~~Givt~~~~k~~p~ 249 (538)
.| ||||+++||++|.
T Consensus 192 l~s~g--gIIt~~~l~l~p~ 209 (326)
T 1hsk_A 192 IQKEH--LVVLEAAFTLAPG 209 (326)
T ss_dssp HHHTT--CEEEEEEEECEEC
T ss_pred cCCCC--EEEEEEEEEEEcC
Confidence 13 9999999999998
No 26
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.90 E-value=3e-23 Score=211.57 Aligned_cols=164 Identities=17% Similarity=0.063 Sum_probs=143.2
Q ss_pred CCCCcEEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCccccCCCeEEEEccCCcce-EEcCCC-CeEEEcCCCCH
Q 009286 76 YGRPQVIVTPFDVSQIQAVLKCAQKHDLLVKVRSGGHDHEGLSYLSEVPFVMIDMINFSQI-DVDAEA-KSAWVGAGATL 153 (538)
Q Consensus 76 ~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~givIdl~~~~~i-~id~~~-~~v~v~~G~~~ 153 (538)
...|.++++|+|++||+++|++|+++++|+.++|||||..+.+. .+ |++|+|+ |+++ .++.+. .+++||+|++|
T Consensus 12 gg~a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGSnll~~d~-~~--GvVI~l~-~~~i~~i~~~~~~~v~vgAG~~~ 87 (340)
T 1uxy_A 12 DHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLED-YR--GTVIINR-IKGIEIHDEPDAWYLHVGAGENW 87 (340)
T ss_dssp CCBEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEEECSC-EE--EEEEEEC-CCCEEEEECSSEEEEEEETTSBH
T ss_pred CccccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCcCCcccCC-CC--eEEEEcc-CCCcEEEecCCCeEEEEecCCCH
Confidence 34799999999999999999999999999999999999886653 34 8999996 9999 466666 69999999999
Q ss_pred HHHHHHHHHhCCCceecCCCCCcccccccCcCCccCCCccccCc-hHHhhheeEEeec-CceeeeccCCCcchhHHhhcc
Q 009286 154 GELYYKISEKSKNLAFPAGICPTVAVGGHLSGGGFGYIMRKYGL-GADQVIDAHLVDV-NGRILDRKSMGEDLFWAIRGG 231 (538)
Q Consensus 154 ~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~gGg~g~~~~~~G~-~~d~v~~~~vV~~-~G~i~~~~~~~~dlf~a~rG~ 231 (538)
.+|.+++.++|+ .|.++.+||+| ++||+..++.+.||. ++|+|+++++|++ +|++++.. +.|++|+||++
T Consensus 88 ~~l~~~~~~~Gl-----~Gle~~~gIPG-tVGGa~~~NaGayG~ei~d~v~~v~vv~~~~G~v~~~~--~~d~~~gYR~s 159 (340)
T 1uxy_A 88 HRLVKYTLQEGM-----PGLENLALIPG-CVGSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLT--AKECRFGYRDS 159 (340)
T ss_dssp HHHHHHHHHTTC-----CSCGGGTTCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGTCBTTBC
T ss_pred HHHHHHHHHCCC-----CccccccCCcc-chhHHHHhccccchhhHHhheeEEEEEECCCCcEEEEe--HHHhccccCcC
Confidence 999999999983 57778888988 779999999999995 9999999999996 99999743 36999999988
Q ss_pred CC----CCeEEEEEEEEEEEecCC
Q 009286 232 GA----ASFGVLVAWKVNLVDVPS 251 (538)
Q Consensus 232 ~~----g~~Givt~~~~k~~p~~~ 251 (538)
.. +++||||+++||+.|.++
T Consensus 160 ~~~~~~~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 160 IFKHEYQDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp GGGTTTTTTEEEEEEEEEEESSCC
T ss_pred ccCCcCCCCEEEEEEEEEEEcCCC
Confidence 52 359999999999999864
No 27
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.87 E-value=3e-22 Score=197.23 Aligned_cols=151 Identities=18% Similarity=0.177 Sum_probs=130.8
Q ss_pred CCcEEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCccccCCCeEEEEccCCcceEEcCCCCeEEEcCCCCHHHHH
Q 009286 78 RPQVIVTPFDVSQIQAVLKCAQKHDLLVKVRSGGHDHEGLSYLSEVPFVMIDMINFSQIDVDAEAKSAWVGAGATLGELY 157 (538)
Q Consensus 78 ~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~givIdl~~~~~i~id~~~~~v~v~~G~~~~~l~ 157 (538)
.|. +++|+|++||+++| ++|+.++|+|||..+.+.+.+ ++++|+|++|++|++|. +|+||++|.+|.
T Consensus 22 ~a~-vv~p~s~edv~~~v------~ipv~v~GgGsnll~~d~~~~-~GvVI~l~~~~~I~vd~-----~v~aG~~~~~l~ 88 (268)
T 2gqt_A 22 PAE-LWTVETREELKRAT------EAPYRVLGNGSNLLVLDEGVP-ERVIRLAGEFQTYDLKG-----WVGAGTLLPLLV 88 (268)
T ss_dssp EEE-EEEECSHHHHHHHT------TSCEEECSSSSSEEECTTCCS-SEEEEECGGGGCBCTTS-----EEETTSBHHHHH
T ss_pred ceE-EEEeCCHHHHHHHh------CCCeEEcCCCcCceecCCCcC-CeEEEEcCCCCCcEEcC-----EEECCCCHHHHH
Confidence 466 99999999999999 899999999999887665432 38999999999998752 999999999999
Q ss_pred HHHHHhCCCceecCCCCCcccccccCcCCccCCCccccC-chHHhhheeEEeecCceeeeccCCCcchhHHhhccCCCCe
Q 009286 158 YKISEKSKNLAFPAGICPTVAVGGHLSGGGFGYIMRKYG-LGADQVIDAHLVDVNGRILDRKSMGEDLFWAIRGGGAASF 236 (538)
Q Consensus 158 ~~l~~~g~~l~~~~g~~~~vgvgG~~~gGg~g~~~~~~G-~~~d~v~~~~vV~~~G~i~~~~~~~~dlf~a~rG~~~g~~ 236 (538)
+++.++| + .|.++.++|+| ++||+..++++.|| .++|+|+++++| +||++++.. +.|++|+||++....-
T Consensus 89 ~~~~~~G--l---~Gle~~~giPG-tvGGav~~NaGayG~e~~d~v~~v~vv-~~G~v~~~~--~~~l~~~YR~s~~~~~ 159 (268)
T 2gqt_A 89 QEAARAG--L---SGLEGLLGIPA-QVGGAVKMNAGTRFGEMADALEAVEVF-HDGAFHVYC--PEELGFGYRKSHLPPG 159 (268)
T ss_dssp HHHHHTT--E---ESCGGGTTCCC-BHHHHHHTTCEETTEEGGGGEEEEEEE-ETTEEEEEC--GGGSCCBTTBCCCSTT
T ss_pred HHHHHcC--C---cCCccccCccc-hhHHHHHhccccCchhHHhheeEEEEE-CCCcEEEEc--hHHcccccCCCCcCCC
Confidence 9999998 3 47788889998 78999999999999 699999999999 999999743 3589999998863222
Q ss_pred EEEEEEEEEEEecC
Q 009286 237 GVLVAWKVNLVDVP 250 (538)
Q Consensus 237 Givt~~~~k~~p~~ 250 (538)
||||+++||++|.+
T Consensus 160 gIVt~~~~~L~~~~ 173 (268)
T 2gqt_A 160 GIVTRVRLKLKERP 173 (268)
T ss_dssp CEEEEEEECCEECC
T ss_pred ceEEEEEEEEEeCC
Confidence 49999999999974
No 28
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.77 E-value=3.7e-19 Score=170.29 Aligned_cols=117 Identities=20% Similarity=0.191 Sum_probs=100.1
Q ss_pred eEEcCCCCeEEEcCCCCHHHHHHHHHHhCCCceecC--CCCCcccccccCcCCccCCCccccCchHHhhheeEEeecCce
Q 009286 136 IDVDAEAKSAWVGAGATLGELYYKISEKSKNLAFPA--GICPTVAVGGHLSGGGFGYIMRKYGLGADQVIDAHLVDVNGR 213 (538)
Q Consensus 136 i~id~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~--g~~~~vgvgG~~~gGg~g~~~~~~G~~~d~v~~~~vV~~~G~ 213 (538)
+++|+++.+|+||+|+++.+|+++|.++| +.++. |.++. +|||++++|++| .+||.. |+|++++||++||+
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~~~G--l~~~~~Pg~~~~-tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG~ 73 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLAGTG--LFPPFPPVELPG-GVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKGR 73 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHTTTT--EECSSCSEECTT-HHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTSC
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHHHcC--CEEeccCCCCCC-chhheeccCccc---ccCCCc-cEEEEEEEEeCCCC
Confidence 47899999999999999999999999987 44444 55555 999999999988 899999 99999999999999
Q ss_pred eee-cc-----CCCcchhHHhhccCCCCeEEEEEEEEEEEecCCeEEEEEEec
Q 009286 214 ILD-RK-----SMGEDLFWAIRGGGAASFGVLVAWKVNLVDVPSIVTVFTVQK 260 (538)
Q Consensus 214 i~~-~~-----~~~~dlf~a~rG~~~g~~Givt~~~~k~~p~~~~~~~~~~~~ 260 (538)
+++ +. ..++||||+++|++ |+|||||+++||++|.|+....+.+.+
T Consensus 74 i~~~~~~~~kn~~gydl~~~~~Gs~-G~lGIVt~~tlrl~p~~~~~~~~~~~~ 125 (219)
T 2yvs_A 74 RVRAGGVVVKNVQGYDLVRLFVGSF-GLLGRAEEVVLRLRPGRAQAFLRRPFS 125 (219)
T ss_dssp EEEEECSSCSSSSCSCHHHHHTTCT-TTTCEEEEEEEECEECSEEEEEEEECC
T ss_pred EEEECCccccCCCCcchHHHhccCC-CceEEEEEEEEEEEECCcccEEEEEec
Confidence 996 22 24589999999997 899999999999999998665554443
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=98.17 E-value=4.1e-06 Score=83.19 Aligned_cols=158 Identities=20% Similarity=0.130 Sum_probs=100.5
Q ss_pred CCcEEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCC-ccccCCCeEEEEccC---CcceEEcCCCCeEEEcCCCCH
Q 009286 78 RPQVIVTPFDVSQIQAVLKCAQKHDLLVKVRSGGHDHEGL-SYLSEVPFVMIDMIN---FSQIDVDAEAKSAWVGAGATL 153 (538)
Q Consensus 78 ~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~-~~~~~~~givIdl~~---~~~i~id~~~~~v~v~~G~~~ 153 (538)
.|..++.|+|.+|+.++++.. +.+..+.|||++.... .......+++||+++ |+.|+. +++.+++|+|+++
T Consensus 4 ~~~~~~~P~s~~ea~~ll~~~---~~~~~ilaGGT~ll~~~~~~~~~~~~lIdl~~i~eL~~i~~--~~~~l~iGA~~tl 78 (287)
T 1ffv_C 4 PRFEYHAPKSVGEAVALLGQL---GSDAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRGIRE--EGSTVVIGAMTVE 78 (287)
T ss_dssp CCCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEE--ETTEEEEETTCBH
T ss_pred CcceEECCCCHHHHHHHHHhc---CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEe--cCCEEEEccCCcH
Confidence 456789999999999998763 3579999999996532 111111379999984 677766 3457999999999
Q ss_pred HHHHHH-HHHhCC-Ccee----cCCCC--CcccccccCcCCccCCCccccCchHHhhh----eeEEeecCceeeeccCCC
Q 009286 154 GELYYK-ISEKSK-NLAF----PAGIC--PTVAVGGHLSGGGFGYIMRKYGLGADQVI----DAHLVDVNGRILDRKSMG 221 (538)
Q Consensus 154 ~~l~~~-l~~~g~-~l~~----~~g~~--~~vgvgG~~~gGg~g~~~~~~G~~~d~v~----~~~vV~~~G~i~~~~~~~ 221 (538)
.+|.+. +.++++ .+.. ..|.- +..+|||.+..+.. .+.....++ .+++..++|+ .+.. -
T Consensus 79 ~~l~~~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~------~~D~~~~l~Al~A~v~~~~~~G~-r~i~--~ 149 (287)
T 1ffv_C 79 NDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDP------GNDHPALSIAVEAHFVLEGPNGR-RTVP--A 149 (287)
T ss_dssp HHHHHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCT------TCSHHHHHHHTTCEEEEEETTEE-EEEE--S
T ss_pred HHHhhChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCCC------cHHHHHHHHHcCcEEEEEcCCce-EEEE--H
Confidence 999962 333322 1111 12211 23567777766532 244444444 6888889994 3322 2
Q ss_pred cchhHHhhccCCCCeEEEEEEEEEEEec
Q 009286 222 EDLFWAIRGGGAASFGVLVAWKVNLVDV 249 (538)
Q Consensus 222 ~dlf~a~rG~~~g~~Givt~~~~k~~p~ 249 (538)
.|+|+++|-.....=.|||+++|...+.
T Consensus 150 ~df~~g~~~t~l~~~eii~~i~ip~~~~ 177 (287)
T 1ffv_C 150 DGFFLGTYMTLLEENEVMVEIRVPAFAQ 177 (287)
T ss_dssp TTTEEETTEESCCTTCEEEEEEEECCCT
T ss_pred HHHhcCcccccCCCCCEEEEEEecCCCC
Confidence 4888887643222225999999987653
No 30
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=97.40 E-value=0.00023 Score=70.58 Aligned_cols=157 Identities=15% Similarity=0.071 Sum_probs=93.1
Q ss_pred CCcEEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCC-ccccCCCeEEEEccC---CcceEEcCCCCeEEEcCCCCH
Q 009286 78 RPQVIVTPFDVSQIQAVLKCAQKHDLLVKVRSGGHDHEGL-SYLSEVPFVMIDMIN---FSQIDVDAEAKSAWVGAGATL 153 (538)
Q Consensus 78 ~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~-~~~~~~~givIdl~~---~~~i~id~~~~~v~v~~G~~~ 153 (538)
.+..+++|+|.+|+.++++.. +-+..+.+|||+.... ........++||+++ |+.|+. +++.+++|+++++
T Consensus 4 ~~~~~~~P~sl~ea~~ll~~~---~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~~t~ 78 (288)
T 1n62_C 4 GSFDYHRPKSIADAVALLTKL---GEDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIRE--EGTDVVIGAMTTQ 78 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSCEEE--ETTEEEEETTCBH
T ss_pred CceEEECcCCHHHHHHHHHhc---CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEe--cCCEEEEccCCcH
Confidence 456689999999999988643 3468999999995431 111112369999986 466655 4568999999999
Q ss_pred HHHHH--HHHHhCCCcee--c-CCCC---CcccccccCcCCccCCCccccCchHHhhh----eeEEeecCceeeeccCCC
Q 009286 154 GELYY--KISEKSKNLAF--P-AGIC---PTVAVGGHLSGGGFGYIMRKYGLGADQVI----DAHLVDVNGRILDRKSMG 221 (538)
Q Consensus 154 ~~l~~--~l~~~g~~l~~--~-~g~~---~~vgvgG~~~gGg~g~~~~~~G~~~d~v~----~~~vV~~~G~i~~~~~~~ 221 (538)
.+|.+ .+.+.-..+.- . .++. +..+|||.+..+. ..+...--++ .+++..++|+....-
T Consensus 79 ~~l~~~~~~~~~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~------p~sD~~~~L~Al~A~v~l~~~~G~r~v~~--- 149 (288)
T 1n62_C 79 HALIGSDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAANGD------PGNDMPALMQCLGAAYELTGPEGARIVAA--- 149 (288)
T ss_dssp HHHHHCHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCC------TTCSHHHHHHHHTCEEEEEETTEEEEEEH---
T ss_pred HHHhcChHHHHHHHHHHHHHHHhCCHHHHccccccchhccCC------CchHHHHHHHHhCcEEEEEeCCccEEEEH---
Confidence 99994 45443101110 0 1111 2346788877652 1222222222 566777888433211
Q ss_pred cchhHHhhccCCCCeEEEEEEEEEEEe
Q 009286 222 EDLFWAIRGGGAASFGVLVAWKVNLVD 248 (538)
Q Consensus 222 ~dlf~a~rG~~~g~~Givt~~~~k~~p 248 (538)
.|+|.+++-.....=-|||++.|...+
T Consensus 150 ~df~~g~~~t~l~~~eil~~i~ip~~~ 176 (288)
T 1n62_C 150 RDYYQGAYFTAIEPGELLTAIRIPVPP 176 (288)
T ss_dssp HHHEEETTEESCCTTCEEEEEEEECCC
T ss_pred HHHhcCcccccCCCCCEEEEEEeCCCC
Confidence 366665542111122589999887654
No 31
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=97.16 E-value=0.00032 Score=73.96 Aligned_cols=151 Identities=17% Similarity=0.110 Sum_probs=98.3
Q ss_pred EEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCC--ccccCCCeEEEEccC---CcceEEcCCCCeEEEcCCCCHHH
Q 009286 81 VIVTPFDVSQIQAVLKCAQKHDLLVKVRSGGHDHEGL--SYLSEVPFVMIDMIN---FSQIDVDAEAKSAWVGAGATLGE 155 (538)
Q Consensus 81 ~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~--~~~~~~~givIdl~~---~~~i~id~~~~~v~v~~G~~~~~ 155 (538)
..++|+|.+|+.++++... +..+.+||++.... .... ...++||+++ |+.|+.+ .+.+++|+|+++.+
T Consensus 179 ~y~~P~sl~ea~~ll~~~~----~a~ilaGGT~L~~~~k~~~~-~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~vtl~~ 251 (462)
T 2w3s_A 179 PAFLPETSDALADWYLAHP----EATLIAGGTDVSLWVTKALR-DLPEVAFLSHCKDLAQIRET--PDGYGIGAGVTIAA 251 (462)
T ss_dssp CCBCCSSHHHHHHHHHHCT----TCEEESSCTTTTHHHHTSCC-CCCSEEECTTCGGGSCEEEE--TTEEEEETTCBHHH
T ss_pred EEEecCCHHHHHHHHhhCC----CCEEEeCCchhhhhhhccCC-CCCEEEEcCCChhhCcEEEc--CCEEEEccCCcHHH
Confidence 4678999999999887531 57889999997643 1111 2368999988 6777664 45799999999999
Q ss_pred HHHHHHHhCCC-c----eecCCCC--CcccccccCcCCccCCCccccCchHHhhh----eeEEeecCceeeeccCCCcch
Q 009286 156 LYYKISEKSKN-L----AFPAGIC--PTVAVGGHLSGGGFGYIMRKYGLGADQVI----DAHLVDVNGRILDRKSMGEDL 224 (538)
Q Consensus 156 l~~~l~~~g~~-l----~~~~g~~--~~vgvgG~~~gGg~g~~~~~~G~~~d~v~----~~~vV~~~G~i~~~~~~~~dl 224 (538)
|.+.+.+ .+. + ....+.- +..+|||.+..+.+ .+....-++ .+++..++|+.. .. -.|+
T Consensus 252 l~~~l~~-~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp------~sD~~~~L~ALdA~v~l~~~~G~R~-vp--~~dF 321 (462)
T 2w3s_A 252 LRAFAEG-PHPALAGLLRRFASEQVRQVATIGGNIANGSP------IGDGPPALIAMGASLTLRRGQERRR-MP--LEDF 321 (462)
T ss_dssp HHHHHTT-TCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCT------TCSHHHHHHHTTCEEEEEBTTBCCC-CB--GGGG
T ss_pred HHHHHHH-HhHHHHHHHHHhCChhheeeEEcccccccCCC------cchHHHHHHHcCCEEEEEeCCceEE-EE--HHHh
Confidence 9987433 221 1 1111111 33578888877553 366777777 788888888422 22 2477
Q ss_pred hHHhhccCCCCeEEEEEEEEEEEe
Q 009286 225 FWAIRGGGAASFGVLVAWKVNLVD 248 (538)
Q Consensus 225 f~a~rG~~~g~~Givt~~~~k~~p 248 (538)
|.++|-.....=-||+++.|...+
T Consensus 322 ~~g~~~t~L~~~Eii~~i~iP~~~ 345 (462)
T 2w3s_A 322 FLEYRKQDRRPGEFVESVTLPKSA 345 (462)
T ss_dssp EEETTEESCCTTCEEEEEEEESCC
T ss_pred hcccccccCCCCcEEEEEEEecCC
Confidence 777653221122499999887654
No 32
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=96.39 E-value=0.0045 Score=61.73 Aligned_cols=156 Identities=10% Similarity=0.055 Sum_probs=90.0
Q ss_pred CCcEEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCc-cccCCCeEEEEccCC---cceEEcCCCCeEEEcCCCCH
Q 009286 78 RPQVIVTPFDVSQIQAVLKCAQKHDLLVKVRSGGHDHEGLS-YLSEVPFVMIDMINF---SQIDVDAEAKSAWVGAGATL 153 (538)
Q Consensus 78 ~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~-~~~~~~givIdl~~~---~~i~id~~~~~v~v~~G~~~ 153 (538)
.+...++|+|.+|+.++++.. . ...+.+||++....- ........+||++++ +.|+. +.+.++||+++++
T Consensus 9 ~~~~y~~P~sl~ea~~ll~~~---~-~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt~ 82 (305)
T 3nvz_B 9 ERVTWIQASTLKELLDLKAQH---P-EAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEH--GPEGISFGAACAL 82 (305)
T ss_dssp SSCEEEECCSHHHHHHHHHHC---T-TCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEE--CSSEEEEETTCBH
T ss_pred CCeEEEccCCHHHHHHHHHhC---C-CCEEEECccHHHHHHhcCCCCCCEEEECCCChhhcceEE--CCCeEEEccCCcH
Confidence 456789999999998877542 1 358889999864221 011112689999975 45554 4568999999999
Q ss_pred HHHHHHHHHh----C------C-Cce--e--cCCC--CCcccccccCcCCccCCCccccCchHHhhh----eeEEeecCc
Q 009286 154 GELYYKISEK----S------K-NLA--F--PAGI--CPTVAVGGHLSGGGFGYIMRKYGLGADQVI----DAHLVDVNG 212 (538)
Q Consensus 154 ~~l~~~l~~~----g------~-~l~--~--~~g~--~~~vgvgG~~~gGg~g~~~~~~G~~~d~v~----~~~vV~~~G 212 (538)
.++.+.+.++ . . .+. + ..+. -+..+|||.+..+.. .+...--++ .+++..++|
T Consensus 83 ~~l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~p------~sD~~~~L~AldA~v~l~~~~G 156 (305)
T 3nvz_B 83 SSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASP------ISDLNPVFMASGTKLTIVSRGT 156 (305)
T ss_dssp HHHHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCCT------TCSSHHHHHHHTCEEEEEETTE
T ss_pred HHHHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCCC------chHHHHHHHHcCCEEEEEcCCC
Confidence 9999876532 0 0 000 0 1111 134567787766532 233333333 566777788
Q ss_pred eeeeccCCCcchhHHhhccCCCCeEEEEEEEEEEE
Q 009286 213 RILDRKSMGEDLFWAIRGGGAASFGVLVAWKVNLV 247 (538)
Q Consensus 213 ~i~~~~~~~~dlf~a~rG~~~g~~Givt~~~~k~~ 247 (538)
+....- ..|+|-+++-.....=-|||++.+...
T Consensus 157 ~R~vp~--~~df~~g~~~t~l~~~Eil~~I~iP~~ 189 (305)
T 3nvz_B 157 RRTVPM--DHTFFPSYRKTLLGPEEILLSIEIPYS 189 (305)
T ss_dssp EEEEEC--CGGGCCSTTCCSCCTTCEEEEEEEECC
T ss_pred cEEEEe--ehHhhcCcccccCCCCcEEEEEEecCC
Confidence 533221 125555443111011139999987543
No 33
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=93.98 E-value=0.093 Score=51.63 Aligned_cols=153 Identities=18% Similarity=0.100 Sum_probs=89.0
Q ss_pred CCCcEEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCc-cccCCCeEEEEccCC---cceEEcCCCCeEEEcCCCC
Q 009286 77 GRPQVIVTPFDVSQIQAVLKCAQKHDLLVKVRSGGHDHEGLS-YLSEVPFVMIDMINF---SQIDVDAEAKSAWVGAGAT 152 (538)
Q Consensus 77 ~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~-~~~~~~givIdl~~~---~~i~id~~~~~v~v~~G~~ 152 (538)
+.|..+++|+|.+|+.++++. +-...+.+||++....- ........+||++++ +.|+. +++.++||++++
T Consensus 3 ~~~f~y~~P~sl~ea~~ll~~----~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt 76 (288)
T 1t3q_C 3 FPAFSYRAPASLQEVIQVLAD----DPDARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFEISQ--SAGILSVGAMVT 76 (288)
T ss_dssp CCCCEEECCSSHHHHHHHHHH----CTTCEEESSCTTHHHHHHTTCCCCSEEEECTTCGGGGCEEE--ETTEEEEETTCB
T ss_pred CCCceEECCCCHHHHHHHHhh----CCCCEEEeCchhHHHHHhcCCCCCCEEEECCCChhhcCeEE--cCCEEEEcCCCc
Confidence 345668999999999988864 23467889999943211 011112589999985 55554 456899999999
Q ss_pred HHHHHH--HHHHhCCCcee--c-CCCC---CcccccccCcCCccCCCccccCchHHhhh-------eeEEeecCceeeec
Q 009286 153 LGELYY--KISEKSKNLAF--P-AGIC---PTVAVGGHLSGGGFGYIMRKYGLGADQVI-------DAHLVDVNGRILDR 217 (538)
Q Consensus 153 ~~~l~~--~l~~~g~~l~~--~-~g~~---~~vgvgG~~~gGg~g~~~~~~G~~~d~v~-------~~~vV~~~G~i~~~ 217 (538)
+.+|.+ .+.++-..+.- . .|+. +..++||.+..+- ...|... .+++..++|+....
T Consensus 77 ~~~l~~~~~~~~~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~---------p~sD~~~~L~Al~A~v~l~~~~g~R~vp 147 (288)
T 1t3q_C 77 HFRNKTDPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHAD---------AGAEMPFLMATLGATMYIASSAGVRSVS 147 (288)
T ss_dssp HHHHHHCHHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTC---------TTCHHHHHHHHTTCEEEEEETTEEEEEE
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHhCCHHHHcceechhhcccCC---------CcHHHHHHHHHcCcEEEEEcCCceEEEE
Confidence 999986 44433111110 0 1111 3346788776441 1345554 66777778853321
Q ss_pred cCCCcchhHHhhccCCCCeEEEEEEEEEEE
Q 009286 218 KSMGEDLFWAIRGGGAASFGVLVAWKVNLV 247 (538)
Q Consensus 218 ~~~~~dlf~a~rG~~~g~~Givt~~~~k~~ 247 (538)
- .|+|.+.+-.....=-|||++.|...
T Consensus 148 ~---~dF~~g~~~t~L~~~Eil~~I~iP~~ 174 (288)
T 1t3q_C 148 A---TDFMKGHYFTDLEAGEVLVRVEIPIP 174 (288)
T ss_dssp H---HHHEEETTEESCCTTCEEEEEEEECC
T ss_pred H---HHHhcCcccccCCCCCEEEEEEecCC
Confidence 1 25554432111011248999987543
No 34
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=92.85 E-value=0.13 Score=50.77 Aligned_cols=78 Identities=18% Similarity=0.201 Sum_probs=53.6
Q ss_pred CCcEEEecCCHHHHHHHHHHHHHCCC-eEEEEeCCCCCCCC-ccccCCCeEEEEccCCcce-EEcCCCCeEEEcCCCCHH
Q 009286 78 RPQVIVTPFDVSQIQAVLKCAQKHDL-LVKVRSGGHDHEGL-SYLSEVPFVMIDMINFSQI-DVDAEAKSAWVGAGATLG 154 (538)
Q Consensus 78 ~p~~vv~P~t~~dv~~~v~~a~~~~~-~v~~~ggGh~~~g~-~~~~~~~givIdl~~~~~i-~id~~~~~v~v~~G~~~~ 154 (538)
.|-..++|+|.+|..++++. ++- ...+.+||++.... .........+||++++... .|..+.+.++||+++++.
T Consensus 2 ~~f~y~~P~sl~ea~~ll~~---~~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~~ 78 (296)
T 3hrd_C 2 KDFEFFAPKTLEEAKGLLHQ---YKDVPPAIIAGGTDLVIEINDRWEKPDVVIDIKKLKELEYIRVEENTIHIGALSTFT 78 (296)
T ss_dssp CCCEEECCSSHHHHHHHHHH---TTTSCCEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEECSSEEEEETTCBHH
T ss_pred CceeEeCCCCHHHHHHHHHh---CCCCCeEEEECCcHHHHHhhcCCCCCCeEEEcccChhhcceEEcCCeEEEccCCcHH
Confidence 34567899999999877643 332 46788999986421 1111123689999986443 333456799999999999
Q ss_pred HHHH
Q 009286 155 ELYY 158 (538)
Q Consensus 155 ~l~~ 158 (538)
++.+
T Consensus 79 ~l~~ 82 (296)
T 3hrd_C 79 QIEN 82 (296)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9974
No 35
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=89.44 E-value=0.37 Score=51.41 Aligned_cols=77 Identities=13% Similarity=0.084 Sum_probs=43.8
Q ss_pred CceEEEE--EEEeCCchhhHHHHHHHHHHHHHcCccccCCCCcccccCCCccccCCCCCCCccchhhhhhhHHhhhccc-
Q 009286 426 NKFHMMY--FAAWSDGEESQKVLELDRKLYEYMTPYVTKNPRATYFNCKDIEIGRNNYGNNYTSVKEASIWGKKYFKNN- 502 (538)
Q Consensus 426 ~~~~i~~--~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~~~Yyg~n- 502 (538)
..+|..+ ...+.+++..++..++++++.+.... +.|..+.-. .. --.|...+||+.
T Consensus 432 GnlH~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e-------hG~G~~k~~-~~-------------~~~~~~~~~g~~~ 490 (520)
T 1wvf_A 432 RDMHHVIDVLYDRTNPEETKRADACFNELLDEFEK-------EGYAVYRVN-TR-------------FQDRVAQSYGPVK 490 (520)
T ss_dssp SEEEEEEEEEEETTCHHHHHHHHHHHHHHHHHHHH-------TTCCBSCCC-GG-------------GHHHHHHHTCHHH
T ss_pred cceeeeeccccCCCCHHHHHHHHHHHHHHHHHHHH-------cCCCccccC-hh-------------HhhhhhhhcCHHH
Confidence 3444443 33344555556677788887776432 122222110 00 011446778865
Q ss_pred HHHHHHhhhccCCCCCcccCC
Q 009286 503 FYRLVDVKTKVDPGNFFRNEQ 523 (538)
Q Consensus 503 ~~RL~~IK~kyDP~nvF~~~q 523 (538)
++-+++||+.+||.|+|+--.
T Consensus 491 ~~lmr~IK~a~DP~~IlNPGk 511 (520)
T 1wvf_A 491 RKLEHAIKRAVDPNNILAPGR 511 (520)
T ss_dssp HHHHHHHHHHHCTTCCBCTTG
T ss_pred HHHHHHHHHHcCCCCCCCCCc
Confidence 566699999999999996543
No 36
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=88.02 E-value=0.44 Score=47.58 Aligned_cols=76 Identities=20% Similarity=0.136 Sum_probs=53.4
Q ss_pred CCcEEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCC-ccccCCCeEEEEccCC---cceEEcCCCCeEEEcCCCCH
Q 009286 78 RPQVIVTPFDVSQIQAVLKCAQKHDLLVKVRSGGHDHEGL-SYLSEVPFVMIDMINF---SQIDVDAEAKSAWVGAGATL 153 (538)
Q Consensus 78 ~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~-~~~~~~~givIdl~~~---~~i~id~~~~~v~v~~G~~~ 153 (538)
.|-..+.|+|.+|..++++. -.-.+.+||++.... -........+||++++ +.|+.+. ++.++||+++++
T Consensus 5 ~~f~y~~P~sl~ea~~ll~~-----~~a~~lAGGT~l~~~~k~~~~~p~~lIdi~~i~eL~~I~~~~-~~~l~IGA~vt~ 78 (324)
T 1rm6_B 5 TDFRTHRPATLADAVNALAA-----EATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLA-DGSLRIGAGATL 78 (324)
T ss_dssp CCCEEECCSSHHHHHHHTTS-----TTEEEESSCTTHHHHHHTTSCCCSEEEECTTSTTTTCEEECT-TSCEEEETTCBH
T ss_pred CceEEEccCCHHHHHHHHhC-----CCCEEEECchhHHHHHhccCCCCCEEEECCCChhhcceEECC-CCeEEEccCCcH
Confidence 45568899999999888762 247888999986421 1111122689999876 5555432 347999999999
Q ss_pred HHHHHH
Q 009286 154 GELYYK 159 (538)
Q Consensus 154 ~~l~~~ 159 (538)
.+|.+.
T Consensus 79 ~~l~~~ 84 (324)
T 1rm6_B 79 EAIAEH 84 (324)
T ss_dssp HHHHHC
T ss_pred HHHHhC
Confidence 999864
No 37
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=74.45 E-value=2.7 Score=49.78 Aligned_cols=80 Identities=9% Similarity=0.048 Sum_probs=54.2
Q ss_pred CCcEEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCc-cccCCCeEEEEccCCcce-EEcCCCCeEEEcCCCCHHH
Q 009286 78 RPQVIVTPFDVSQIQAVLKCAQKHDLLVKVRSGGHDHEGLS-YLSEVPFVMIDMINFSQI-DVDAEAKSAWVGAGATLGE 155 (538)
Q Consensus 78 ~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~-~~~~~~givIdl~~~~~i-~id~~~~~v~v~~G~~~~~ 155 (538)
.+...++|+|.+|+.++++.. -.-.+.+||++....- ........+||++++..+ .|..+.+.++||+++++.+
T Consensus 232 ~~~~~~~P~sl~ea~~ll~~~----~~a~lvaGgT~l~~~~k~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vtl~~ 307 (1332)
T 3unc_A 232 ERVTWIQASTLKELLDLKAQH----PEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACALSS 307 (1332)
T ss_dssp SSCEEEECCSHHHHHHHHHHC----TTCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEECSSEEEEETTCBHHH
T ss_pred CceEEEccCCHHHHHHHHhhC----CCCEEEEeCcHHHHHhhcCCCCCCeEEEcCCCHHhCceEEeCCEEEEEecChHHH
Confidence 455689999999998876542 1247789998854211 111112579999985433 3333456899999999999
Q ss_pred HHHHHH
Q 009286 156 LYYKIS 161 (538)
Q Consensus 156 l~~~l~ 161 (538)
|.+.+.
T Consensus 308 l~~~l~ 313 (1332)
T 3unc_A 308 VEKTLL 313 (1332)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998764
No 38
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=57.78 E-value=13 Score=39.65 Aligned_cols=31 Identities=19% Similarity=0.127 Sum_probs=23.0
Q ss_pred ccHHHHHHhhhccCCCCCcccCCCCC-CCCCC
Q 009286 501 NNFYRLVDVKTKVDPGNFFRNEQSIP-SRIYR 531 (538)
Q Consensus 501 ~n~~RL~~IK~kyDP~nvF~~~qsI~-~~~~~ 531 (538)
..++-+++||+.+||.|+|+--.-+. |..++
T Consensus 523 ~~~~lm~~iK~~~DP~gILNPGk~~~~~~~~~ 554 (560)
T 1e8g_A 523 SFLRFNEVLKNAVDPNGIIAPGKSGVWPSQYS 554 (560)
T ss_dssp HHHHHHHHHHHHHCTTCCBCTTGGGCCCTTSC
T ss_pred HHHHHHHHHHHHcCccCCCCCCccccCccccc
Confidence 46888999999999999996544432 44444
No 39
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=56.71 E-value=12 Score=40.35 Aligned_cols=28 Identities=18% Similarity=0.395 Sum_probs=18.7
Q ss_pred hHHhhhc-ccHHHHHHhhhccCCCCCccc
Q 009286 494 WGKKYFK-NNFYRLVDVKTKVDPGNFFRN 521 (538)
Q Consensus 494 ~~~~Yyg-~n~~RL~~IK~kyDP~nvF~~ 521 (538)
|-...++ ..++-+++||+.+||.|+|+-
T Consensus 552 ~l~~~~g~~~~~lmr~iK~a~DP~gIlNP 580 (584)
T 2uuu_A 552 WMTRYATRGWINVYRSLKETIDPKDICNP 580 (584)
T ss_dssp -------CTHHHHHHHHHHHHCTTCCBSC
T ss_pred HHHHhcCHHHHHHHHHHHHHcCCCcCCCC
Confidence 4455556 468999999999999999953
No 40
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=41.93 E-value=9.9 Score=40.72 Aligned_cols=23 Identities=22% Similarity=0.310 Sum_probs=21.2
Q ss_pred ccHHHHHHhhhccCCCCCcccCC
Q 009286 501 NNFYRLVDVKTKVDPGNFFRNEQ 523 (538)
Q Consensus 501 ~n~~RL~~IK~kyDP~nvF~~~q 523 (538)
.++++.+++++++||+++|.+++
T Consensus 533 p~~~~f~~~r~~~DP~g~F~n~~ 555 (561)
T 2i0k_A 533 ENWDTARARYNQIDPHRVFTNGF 555 (561)
T ss_dssp SSHHHHHHHHHHHCTTCCSCCHH
T ss_pred CCHHHHHHHHHhcCCCCccCCHH
Confidence 89999999999999999998753
No 41
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=39.89 E-value=14 Score=39.71 Aligned_cols=28 Identities=21% Similarity=0.147 Sum_probs=20.2
Q ss_pred hcccHHHHHHhhhccCCCCCcccCCCCCC
Q 009286 499 FKNNFYRLVDVKTKVDPGNFFRNEQSIPS 527 (538)
Q Consensus 499 yg~n~~RL~~IK~kyDP~nvF~~~qsI~~ 527 (538)
|++... |++||+.+||.|+|+-..-+.|
T Consensus 535 ~~~~~~-m~~iK~~~DP~~ilNPGk~~t~ 562 (571)
T 1f0x_A 535 YKAPET-LQKFYRENDPTNSMNPGIGKTS 562 (571)
T ss_dssp SCCCHH-HHHHHHHHCTTCCBSTTTTTCC
T ss_pred cCCHHH-HHHHHHHhCCCCCCCCCcCcCC
Confidence 344444 9999999999999965444433
No 42
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=37.05 E-value=42 Score=28.08 Aligned_cols=37 Identities=16% Similarity=0.305 Sum_probs=32.2
Q ss_pred CCCcEEEecCCHHHHHHHHHHHHHCCCeE-EEEeCCCC
Q 009286 77 GRPQVIVTPFDVSQIQAVLKCAQKHDLLV-KVRSGGHD 113 (538)
Q Consensus 77 ~~p~~vv~P~t~~dv~~~v~~a~~~~~~v-~~~ggGh~ 113 (538)
..+..|+++.+++|+.++.+.|++.|+|. .|+-.|+.
T Consensus 47 G~~Kvvlk~~~e~el~~L~~~a~~~gl~~~~I~DAG~T 84 (123)
T 1rzw_A 47 GQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLT 84 (123)
T ss_dssp CSSEEEEECSCHHHHHHHHHHHHHTTCCEEEECCTTCC
T ss_pred CCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEECCCCc
Confidence 47999999999999999999999999986 56666764
No 43
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=35.79 E-value=24 Score=41.91 Aligned_cols=76 Identities=12% Similarity=0.114 Sum_probs=50.3
Q ss_pred EEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCCCCC---CccccCCCeEEEEccCCcce-EEcCCCCeEEEcCCCCHHHH
Q 009286 81 VIVTPFDVSQIQAVLKCAQKHDLLVKVRSGGHDHEG---LSYLSEVPFVMIDMINFSQI-DVDAEAKSAWVGAGATLGEL 156 (538)
Q Consensus 81 ~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~g---~~~~~~~~givIdl~~~~~i-~id~~~~~v~v~~G~~~~~l 156 (538)
..+.|.|.+|+.++...-. +-+ +..|++...- ..... -.++||+.+.... .+..++..++||+++++.++
T Consensus 242 ~w~~P~tl~el~~l~~~~p--~a~--lvaGnT~~gl~~~~~~~~--~~~~I~~~~v~EL~~i~~~~~~l~IGA~vtls~~ 315 (1335)
T 3zyv_A 242 TWIAPGTLNDLLELKMKHP--SAP--LVIGNTYLGLHMKFTDVS--YPIIISPARILELFVVTNTKQGLTLGTGLSLTQV 315 (1335)
T ss_dssp EEEECSSHHHHHHHHHHCT--TSC--BCSSCTTHHHHHC--CCC--CSEEECCTTCGGGSCEECCTTEEEEETTCBHHHH
T ss_pred eEecCCCHHHHHHHHHHCC--CCe--EEEecccceeeEeecCCC--CCeEEEcCcchhHheEEecCCEEEEcccCcHHHH
Confidence 4689999999988754321 233 4556665321 11111 2588998875554 45556678999999999999
Q ss_pred HHHHHH
Q 009286 157 YYKISE 162 (538)
Q Consensus 157 ~~~l~~ 162 (538)
.+.|.+
T Consensus 316 ~~~l~~ 321 (1335)
T 3zyv_A 316 KNVLSD 321 (1335)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988764
No 44
>3p04_A Uncharacterized BCR; SEPF homolog, DUF552, PSI-biology, NESG, structural genomics structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=35.72 E-value=44 Score=26.17 Aligned_cols=35 Identities=23% Similarity=0.176 Sum_probs=28.8
Q ss_pred CcEEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCccccCCCeEEEEccCCcc
Q 009286 79 PQVIVTPFDVSQIQAVLKCAQKHDLLVKVRSGGHDHEGLSYLSEVPFVMIDMINFSQ 135 (538)
Q Consensus 79 p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~~~~~~~givIdl~~~~~ 135 (538)
-..++.|++-+|.++++...++.. .++|+|..|+.
T Consensus 6 ~Ivv~~P~sy~Da~~I~d~Lr~~~----------------------~VvvNL~~ld~ 40 (87)
T 3p04_A 6 TIVPVELHSFEDAQVIGGAFRDGD----------------------AVVFDMSLLSR 40 (87)
T ss_dssp SCEEEECSSGGGHHHHHHHHHTTC----------------------CEEEECTTSCH
T ss_pred EEEEEecCcHHHHHHHHHHHHCCC----------------------EEEEECCCCCH
Confidence 357899999999999999888632 68899988754
No 45
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=34.38 E-value=13 Score=39.42 Aligned_cols=23 Identities=17% Similarity=0.219 Sum_probs=21.2
Q ss_pred cccHHHHHHhhhccCCCCCcccC
Q 009286 500 KNNFYRLVDVKTKVDPGNFFRNE 522 (538)
Q Consensus 500 g~n~~RL~~IK~kyDP~nvF~~~ 522 (538)
|+++..-++++.++||+++|.++
T Consensus 511 ~~~~~~~~~~~~~~DP~~~F~n~ 533 (540)
T 3js8_A 511 AANWDAAKAALAAYDPYRLFSSP 533 (540)
T ss_dssp GGSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCCHHHHHHHHHhcCCCcccCCH
Confidence 58999999999999999999874
No 46
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=32.95 E-value=67 Score=26.66 Aligned_cols=38 Identities=21% Similarity=0.209 Sum_probs=32.7
Q ss_pred CCCCcEEEecCCHHHHHHHHHHHHHCCCeE-EEEeCCCC
Q 009286 76 YGRPQVIVTPFDVSQIQAVLKCAQKHDLLV-KVRSGGHD 113 (538)
Q Consensus 76 ~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v-~~~ggGh~ 113 (538)
...|..|+++.+++++.++.+.|.+.|+|. .++-.|+.
T Consensus 53 ~g~~Kvvlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 91 (121)
T 1wn2_A 53 EGQKKVVVKVESEEELFKLKAEAEKLGLPNALIRDAGLT 91 (121)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECTTCT
T ss_pred CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 458999999999999999999999999986 56666663
No 47
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=32.64 E-value=70 Score=26.49 Aligned_cols=38 Identities=24% Similarity=0.375 Sum_probs=32.7
Q ss_pred CCCCcEEEecCCHHHHHHHHHHHHHCCCeE-EEEeCCCC
Q 009286 76 YGRPQVIVTPFDVSQIQAVLKCAQKHDLLV-KVRSGGHD 113 (538)
Q Consensus 76 ~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v-~~~ggGh~ 113 (538)
...|..|+++.+++|+.++.+.|.+.|+|. .++=.|+.
T Consensus 52 ~g~~KiVlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 90 (120)
T 1xty_A 52 QGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAGKT 90 (120)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCSSS
T ss_pred CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 458999999999999999999999999986 56666663
No 48
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=29.21 E-value=67 Score=26.37 Aligned_cols=38 Identities=21% Similarity=0.344 Sum_probs=30.9
Q ss_pred CCCCcEEEecCCHHHHHHHHHHHHHCCCeE-EEEeCCCC
Q 009286 76 YGRPQVIVTPFDVSQIQAVLKCAQKHDLLV-KVRSGGHD 113 (538)
Q Consensus 76 ~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v-~~~ggGh~ 113 (538)
...|..|+++.+++|+.++.+.|.+.|+|. .++-.|+.
T Consensus 47 ~g~~kivlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~T 85 (115)
T 2zv3_A 47 EGQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDAGHT 85 (115)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEEECC--
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHcCCCEEEEEeCCce
Confidence 458999999999999999999999999986 45555553
No 49
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=28.25 E-value=71 Score=26.31 Aligned_cols=38 Identities=18% Similarity=0.322 Sum_probs=32.4
Q ss_pred CCCCcEEEecCCHHHHHHHHHHHHHCCCeE-EEEeCCCC
Q 009286 76 YGRPQVIVTPFDVSQIQAVLKCAQKHDLLV-KVRSGGHD 113 (538)
Q Consensus 76 ~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v-~~~ggGh~ 113 (538)
...|..|+++.+++++.++.+.|.+.|+|. .++-.|+.
T Consensus 49 ~g~~kiVlk~~~e~~l~~l~~~a~~~gl~~~~v~DAG~T 87 (117)
T 1rlk_A 49 EGQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGYT 87 (117)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCSS
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 458999999999999999999999999986 55556654
No 50
>1q7s_A BIT1, protein CGI-147; apoptosis; 2.00A {Homo sapiens} SCOP: c.131.1.1
Probab=24.91 E-value=1.1e+02 Score=25.09 Aligned_cols=36 Identities=31% Similarity=0.479 Sum_probs=31.1
Q ss_pred CCCcEEEecCCHHHHHHHHHHHHHCCCeE-EEEeCCC
Q 009286 77 GRPQVIVTPFDVSQIQAVLKCAQKHDLLV-KVRSGGH 112 (538)
Q Consensus 77 ~~p~~vv~P~t~~dv~~~v~~a~~~~~~v-~~~ggGh 112 (538)
..|..+++..+++++.++.+.|.+.|+|. .++=.|+
T Consensus 50 g~~KVvlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 86 (117)
T 1q7s_A 50 GQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQDAGR 86 (117)
T ss_dssp TCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred CCeeEEEEcCCHHHHHHHHHHHHHCCCCEEEEEECCC
Confidence 46999999999999999999999999985 5555665
No 51
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.92 E-value=1.5e+02 Score=22.95 Aligned_cols=34 Identities=12% Similarity=0.137 Sum_probs=25.2
Q ss_pred ceEEcCCCCeEEEcCCCCHHHHHHHHHHhCCCce
Q 009286 135 QIDVDAEAKSAWVGAGATLGELYYKISEKSKNLA 168 (538)
Q Consensus 135 ~i~id~~~~~v~v~~G~~~~~l~~~l~~~g~~l~ 168 (538)
.+.+|...+.++|..-+...++.+.+.+.|+...
T Consensus 48 ~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~~ 81 (98)
T 2crl_A 48 DVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAV 81 (98)
T ss_dssp EEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEE
T ss_pred EEEEECCCCEEEEEEeCCHHHHHHHHHHhCCceE
Confidence 3456667777777766788899999988886433
No 52
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=22.09 E-value=56 Score=32.74 Aligned_cols=23 Identities=9% Similarity=0.146 Sum_probs=20.7
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEE
Q 009286 86 FDVSQIQAVLKCAQKHDLLVKVR 108 (538)
Q Consensus 86 ~t~~dv~~~v~~a~~~~~~v~~~ 108 (538)
-|.+|++++|++|+++|+.|.+-
T Consensus 92 YT~~di~eiv~YA~~rgI~VIPE 114 (367)
T 1yht_A 92 LSYRQLDDIKAYAKAKGIELIPE 114 (367)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCHHHHHHHHHHHHHcCCEEEEe
Confidence 48999999999999999988763
No 53
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=21.06 E-value=1.5e+02 Score=25.67 Aligned_cols=40 Identities=15% Similarity=0.204 Sum_probs=33.5
Q ss_pred cEEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCcc
Q 009286 80 QVIVTPFDVSQIQAVLKCAQKHDLLVKVRSGGHDHEGLSY 119 (538)
Q Consensus 80 ~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~g~~~ 119 (538)
...+.|.+.+++++.++.+.+.+.-+.+-.||.+....+.
T Consensus 47 ~~~iv~Dd~~~I~~~l~~a~~~~~DlVittGG~g~~~~D~ 86 (167)
T 2g2c_A 47 SEVVVPEGYDTVVEAIATALKQGARFIITAGGTGIRAKNQ 86 (167)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTTCSEEEEESCCSSSTTCC
T ss_pred EEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcC
Confidence 4568899999999999999886688999999998765443
No 54
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=20.31 E-value=1.1e+02 Score=23.39 Aligned_cols=34 Identities=18% Similarity=0.219 Sum_probs=28.8
Q ss_pred cEEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCC
Q 009286 80 QVIVTPFDVSQIQAVLKCAQKHDLLVKVRSGGHD 113 (538)
Q Consensus 80 ~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~ 113 (538)
.+|-..++.+|+..+++-.+.+|.|+.+.-.|.+
T Consensus 29 ryirtatssqdirdiiksmkdngkplvvfvngas 62 (112)
T 2lnd_A 29 RYIRTATSSQDIRDIIKSMKDNGKPLVVFVNGAS 62 (112)
T ss_dssp TTEEEECSHHHHHHHHHHHTTCCSCEEEEECSCC
T ss_pred ceeeeccchhhHHHHHHHHHhcCCeEEEEecCcc
Confidence 3466778999999999999999999998877665
Done!