Query 009288
Match_columns 538
No_of_seqs 530 out of 2387
Neff 6.8
Searched_HMMs 46136
Date Thu Mar 28 22:44:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009288.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009288hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03185 phosphatidylinositol 100.0 4E-114 8E-119 957.5 48.3 485 51-538 2-570 (765)
2 KOG0229 Phosphatidylinositol-4 100.0 3.6E-73 7.9E-78 583.5 20.5 240 298-538 25-269 (420)
3 cd00139 PIPKc Phosphatidylinos 100.0 4.1E-60 8.8E-65 484.9 21.7 220 314-537 1-229 (313)
4 smart00330 PIPKc Phosphatidyli 100.0 9E-50 1.9E-54 413.6 20.2 194 340-537 1-200 (342)
5 PLN03185 phosphatidylinositol 100.0 1.8E-37 3.9E-42 345.5 23.2 174 46-220 20-193 (765)
6 COG5253 MSS4 Phosphatidylinosi 100.0 5.2E-39 1.1E-43 332.7 7.2 202 302-522 283-490 (612)
7 PF01504 PIP5K: Phosphatidylin 100.0 7.8E-37 1.7E-41 306.1 9.8 141 396-537 1-145 (252)
8 KOG0230 Phosphatidylinositol-4 99.9 3.3E-28 7.2E-33 277.7 8.9 160 368-533 1324-1492(1598)
9 COG4642 Uncharacterized protei 99.8 4E-19 8.6E-24 157.3 11.4 132 80-211 8-139 (139)
10 COG4642 Uncharacterized protei 99.8 1.7E-18 3.7E-23 153.3 11.7 134 55-188 6-139 (139)
11 KOG0231 Junctional membrane co 99.8 3.6E-19 7.8E-24 191.8 8.6 174 46-219 131-319 (455)
12 KOG0231 Junctional membrane co 99.7 1.5E-17 3.2E-22 179.4 9.1 172 50-223 114-300 (455)
13 COG2849 Uncharacterized protei 98.0 0.00012 2.7E-09 72.8 14.9 129 93-221 86-219 (230)
14 COG2849 Uncharacterized protei 98.0 0.00023 5.1E-09 70.8 16.5 139 69-207 85-229 (230)
15 smart00698 MORN Possible plasm 97.5 0.00019 4.1E-09 46.6 4.0 22 197-218 2-23 (26)
16 PF02493 MORN: MORN repeat; I 97.3 0.00016 3.4E-09 45.4 2.4 22 198-219 1-22 (23)
17 smart00698 MORN Possible plasm 97.3 0.00036 7.7E-09 45.4 3.9 22 174-195 2-23 (26)
18 PF02493 MORN: MORN repeat; I 97.3 0.00023 5E-09 44.6 2.7 22 175-196 1-22 (23)
19 PLN02667 inositol polyphosphat 68.0 11 0.00023 39.0 5.8 70 420-496 23-99 (286)
20 PF12226 Astro_capsid_p: Turke 65.9 2.9 6.4E-05 39.4 1.1 53 372-432 102-157 (230)
21 PF07202 Tcp10_C: T-complex pr 55.6 2E+02 0.0043 27.7 12.4 13 185-197 118-130 (179)
22 PF01636 APH: Phosphotransfera 46.0 1E+02 0.0023 28.9 8.3 72 409-483 6-78 (239)
23 PRK10345 hypothetical protein; 45.2 86 0.0019 30.6 7.6 71 409-481 11-86 (210)
24 PF07202 Tcp10_C: T-complex pr 43.5 3.1E+02 0.0066 26.4 12.0 113 92-230 63-175 (179)
25 PF14977 FAM194: FAM194 protei 41.8 1.7E+02 0.0037 28.8 9.0 81 144-232 9-93 (208)
26 cd00180 PKc Catalytic domain o 39.1 1.2E+02 0.0025 27.3 7.2 69 410-483 3-74 (215)
27 smart00653 eIF2B_5 domain pres 30.4 2.6E+02 0.0056 24.6 7.5 74 380-466 24-102 (110)
28 PF10411 DsbC_N: Disulfide bon 28.4 44 0.00095 25.7 2.0 22 404-427 25-46 (57)
29 cd06621 PKc_MAPKK_Pek1_like Ca 27.2 2.2E+02 0.0047 28.2 7.4 71 409-482 10-83 (287)
30 cd06641 STKc_MST3 Catalytic do 25.9 2.4E+02 0.0053 27.5 7.5 68 410-482 14-84 (277)
31 PF02958 EcKinase: Ecdysteroid 25.8 1.3E+02 0.0028 30.3 5.6 57 424-485 28-101 (294)
32 cd05040 PTKc_Ack_like Catalyti 25.5 2.2E+02 0.0047 27.3 6.9 68 409-482 4-77 (257)
33 PF07661 MORN_2: MORN repeat v 24.7 1.2E+02 0.0027 17.7 3.2 11 186-196 3-13 (22)
34 PF14977 FAM194: FAM194 protei 22.8 2.5E+02 0.0054 27.7 6.6 14 94-107 24-37 (208)
No 1
>PLN03185 phosphatidylinositol phosphate kinase; Provisional
Probab=100.00 E-value=3.9e-114 Score=957.53 Aligned_cols=485 Identities=55% Similarity=1.003 Sum_probs=420.5
Q ss_pred EEEcCCCCEEEEEEECCEEeeeEEEEEcCCcEEEEEEECCeEeceeEEEeCCCCeEEEEEeCCeeeeeeEEEeecCCEEE
Q 009288 51 EKILPNGDLYTGAVSGNAPHGVGKYVWSDRCMYEGEWRKGRASGKGKFSWPSGATYEGGFKSGRMDGEGTFVGVEGDTYR 130 (538)
Q Consensus 51 ~~~~~nG~~Y~G~~~~g~~~G~G~~~~~dG~~YeG~w~~G~~~G~G~~~~~~G~~YeG~f~~g~~~G~G~~~~~nG~~Y~ 130 (538)
++.++||++|+|+|.++++||.|++.|+||++|+|+|++|++||.|++.|++|.+|+|+|.+|++||.|++++++|.+|+
T Consensus 2 e~~~~nGd~Y~Ge~~~g~~hG~G~~~~~DG~~YeGew~~Gk~hG~G~~~~~nG~~YeGeF~nG~~hG~G~~~~~~G~~Ye 81 (765)
T PLN03185 2 ELVLSNGDFYSGSLLGNVPEGPGKYLWSDGCMYEGEWRRGMRHGNGKISWPSGATYEGEFSGGYMHGSGTYTGTDGTTYK 81 (765)
T ss_pred eEEecCCCEEEEEEECCccccceEEEECCCCEEEEEEECCEeeCcEeEEeCCCCEEEEEEECCEEeceEEEEecCCCEEE
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeecceeeccceeeecCCCEEEEEEecceEeeeEEEEEcCCCEEEEEEeCCeEeeeEEEEecCCCEEEEEEECCeeeee
Q 009288 131 GSWSNDRKHGYGEKRYANGDVYRGSWRFNLMDGYGKYAWSDGNVYEGEWKNGVIFGKGTLSWNNGNRYEGCWDNGLPKGK 210 (538)
Q Consensus 131 G~~~~g~~~G~G~~~~~nG~~YeG~w~~g~~~G~G~~~~~nG~~Y~G~w~~G~~~G~G~~~~~nG~~yeG~w~~G~~~G~ 210 (538)
|+|++|++||.|+++|+||++|+|+|++|+++|.|+|.|+||.+|+|+|++|++||.|+++|+||++|+|+|.+|++||.
T Consensus 82 G~w~~gkkhG~G~~~y~nG~vYeG~wk~G~~~G~G~y~~~nG~~Y~Gefk~Gk~~G~G~l~~~nG~~YeG~w~nG~~hG~ 161 (765)
T PLN03185 82 GRWRLNLKHGLGYQRYPNGDVFEGSWIQGLQEGPGKYTWANGNVYLGDMKGGKMSGKGTLTWVSGDSYEGQWLDGMMHGF 161 (765)
T ss_pred EEEeCCcccceeEEEEecchhhhhhhhcCceecceeeeccCCCeEEEEecCCEEecCEEEEEeCCCeEEEEEeCCcceee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCcccC-------CcccceEecCccccCCCC--CCCC------C-----------------------------
Q 009288 211 GVFTWSNHENMKN-------DERDNFEVMGARKRSSSA--DPAR------P----------------------------- 246 (538)
Q Consensus 211 G~~~~~dG~~y~~-------~~kg~~~~~g~~~~~~~~--~~~~------~----------------------------- 246 (538)
|+|+|+||.+|.+ +++|+|++.|...+.... ...+ +
T Consensus 162 G~y~~~DG~~Y~G~W~~G~~~G~G~~y~~G~~~p~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (765)
T PLN03185 162 GVYTWSDGGCYVGTWTRGLKDGKGVFYPAGSRVPAVQEFYLNALRKRGVLPDLRRQNQVLSSHNSEQLSRGVSSDKLSKG 241 (765)
T ss_pred EEEEECCCCEEEEEeeCCceEeEEEEEECCCcccccchhhhhcccccccccchhhccccccccccccccccccccccccc
Confidence 9999999999943 456999998764221110 0000 0
Q ss_pred ce---------ee-----eccCCCCCC-ccchhc---chhhHhhhhhc-------ccCCCCCCCCCcc-----------c
Q 009288 247 RI---------YI-----WELDGEAGD-ITCDIV---DKAEAASMLYK-------NQFGGPPNGIGQF-----------Q 290 (538)
Q Consensus 247 ~~---------~~-----~~~~~~~~~-~~~~~~---~~~~~~~~~~~-------~~~~~~~~~~~~~-----------~ 290 (538)
++ .. |.++.+..+ ++.+.+ ..++. .+++. ..++|+++||+.. .
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (765)
T PLN03185 242 SLLPLEQSRNRNVSLERRWSLEVSIEKVIGHDYSGSSSAVLD-EGSEVEYKANRPILEREYMQGVLISELVLNNSFSSTS 320 (765)
T ss_pred ccccccccccccccccccccccCcccceeccccccccccccc-chhhccccccccccchhhhcceeeeeeecccccchhc
Confidence 00 00 110111111 111100 00000 00000 0124677787311 1
Q ss_pred cCCCCCC---CCcccCCCcEEecCCCcHHHHHHHHHHHHhhhcCC-CcccccCCcccCCCceeeEeeCCCCCCCCCCCCc
Q 009288 291 KSPCSSA---DGEVKKPGHTISKGHKNYDLMLNLQLGIRHSVGKH-ASVMRELRQSDFEPKEKFWTRFPPEGSKFTPPHQ 366 (538)
Q Consensus 291 ~~~~~~~---~~~~~~~g~~i~~gh~~~~l~~~~~~Gi~~~i~~~-~~~~~~l~~~df~~~~k~~~~f~~~~~~~~~~~~ 366 (538)
++++.+. .++++++|++|++||++|+||++||||||+||+++ +.+.++|+++||++++|+++.||++|++.||+|+
T Consensus 321 ~~~~~~~~~~~~~~~~~g~~i~~gh~~~~l~~~~~~GIr~sv~~~~~~~~~~l~~~DF~~~~~~~~~fp~~gs~~tp~h~ 400 (765)
T PLN03185 321 RRAKRRQKKLVKEIKRPGETIIKGHRSYDLMLSLQLGIRYTVGKITPIQRREVRPSDFGPRASFWMNFPKAGSQLTPSHQ 400 (765)
T ss_pred cccccccccchhhhcCCCcEEecCcCcHHHHHHHHHhHHHHhccccccCCccCChhhCcceEEEEEEcCcccCccCCCCc
Confidence 2332222 36789999999999999999999999999999999 5567799999999999999999999999999999
Q ss_pred cCCeEEEEcCHHHHHHHHHHhCCChHHHHHhhcCCcccccccCCCCccceEEEeeCCcEEEEecCHHHHHHHHHHHHHHH
Q 009288 367 SMDFRWKDYCPMVFRHLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYY 446 (538)
Q Consensus 367 ~~~f~~k~y~P~~F~~lR~~~~i~~~~y~~Sl~~~~~~~~~~s~GkSgs~f~~t~D~rfiiKti~~~E~~~l~~~lp~Y~ 446 (538)
+.+|+||||||+|||+||++|||+++||+.|||++.+|+|++|+|||||+||+|+|+|||||||+++|+++|++|||.||
T Consensus 401 ~~~fkfkdY~P~vFr~LR~~fgId~~dyl~Sl~~~~~l~el~S~GKSGS~Fy~S~D~rFiIKTI~k~E~~~l~~iLp~Y~ 480 (765)
T PLN03185 401 SEDFKWKDYCPMVFRNLREMFKIDAADYMMSICGNDALRELSSPGKSGSVFFLSQDDRFMIKTLRKSEVKVLLRMLPDYH 480 (765)
T ss_pred cCceEEEEECHHHHHHHHHHhCCCHHHHHHhccCCccchhccCCCCcCCeEEEecCCcEEEEecCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCceeEeeEeeEEEEecCCeEEEEEEEeeeccCCCceeeEEEeeccCcCCccCCCccccCCCCcEeeCCCcccc
Q 009288 447 QHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIHRRFDLKGSSYGRITDKPEEEIDETTTLKDLDLDFVF 526 (538)
Q Consensus 447 ~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~N~f~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lKD~d~~~~~ 526 (538)
+||..||+|||+||||||+|++.+++++|||||+|||+++..||++||||||+++|.+++. +.++.+||||+||+..|
T Consensus 481 ~hv~~n~~TLL~kf~Gl~~i~~~~g~k~~fvVM~NlF~~~~~I~~~yDLKGSt~~R~~~k~--~~~~~~tlKDlD~~~~~ 558 (765)
T PLN03185 481 HHVKTYENTLITKFFGLHRIKPSSGQKFRFVVMGNMFCTELRIHRRFDLKGSSLGRSADKV--EIDENTTLKDLDLNYSF 558 (765)
T ss_pred HHHhhCCCcchhhheEEEEEEeCCCcEEEEEEEecCCCCCCccceEEECCCCCCCCCCccc--cccCCCeeeecCcCceE
Confidence 9999999999999999999998888999999999999999999999999999999999763 45678999999999999
Q ss_pred cCCHHHHHHHhC
Q 009288 527 RLDRSWFQELIR 538 (538)
Q Consensus 527 ~~~~~~~~~~~~ 538 (538)
++++.++++|++
T Consensus 559 ~l~~~~k~~l~~ 570 (765)
T PLN03185 559 YLEPSWRDALLR 570 (765)
T ss_pred eeCHHHHHHHHH
Confidence 999999998873
No 2
>KOG0229 consensus Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-73 Score=583.48 Aligned_cols=240 Identities=59% Similarity=0.999 Sum_probs=230.9
Q ss_pred CCcccCCCcEEecCCCcHHHHHHHHHHHHhhhcCC-CcccccCCcccCCCceeeEeeCCCCCCCCCCCCccCCeEEEEcC
Q 009288 298 DGEVKKPGHTISKGHKNYDLMLNLQLGIRHSVGKH-ASVMRELRQSDFEPKEKFWTRFPPEGSKFTPPHQSMDFRWKDYC 376 (538)
Q Consensus 298 ~~~~~~~g~~i~~gh~~~~l~~~~~~Gi~~~i~~~-~~~~~~l~~~df~~~~k~~~~f~~~~~~~~~~~~~~~f~~k~y~ 376 (538)
++..+.+|++|++||.|++||+||||||||||+++ +.+.++|++.||.+.+++++.||.+|++.||||.+.+|+|||||
T Consensus 25 ~~~~~~~g~~v~~~~~~~~l~~~lqlGI~~tVg~ls~v~~r~~~~~df~~~~k~~~~fp~~gs~~tp~h~~~~Fk~KdYc 104 (420)
T KOG0229|consen 25 KKHFVKQGEKVKKGHASYPLMLNLQLGIRHTVGSLSSVPERDLPVMDFPDVEKAYSKFPSEGSKFTPPHHSSDFKFKDYC 104 (420)
T ss_pred ccceeccCceEecccccHHHHHHHHhcchhhhcccccCCcccCchhhCchhhhhheecCCCCCccCCCCCccccchhhcC
Confidence 56788999999999999999999999999999999 77888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHHHHhhcCCcccccccCCCCccceEEEeeCCcEEEEecCHHHHHHHHHHHHHHHHHhhcCCC-c
Q 009288 377 PMVFRHLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKN-T 455 (538)
Q Consensus 377 P~~F~~lR~~~~i~~~~y~~Sl~~~~~~~~~~s~GkSgs~f~~t~D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~-t 455 (538)
|+|||+||++||||++||+.|||++.++++++|||||||+||+|+|+|||||||+++|+++|++|||.||+|+.++++ |
T Consensus 105 P~vFR~lRelFgId~~DYl~Slc~~~~l~e~sspGksGS~Fy~S~DdrFiIKTv~~~E~~~l~~mLp~Yy~~v~~~~~~T 184 (420)
T KOG0229|consen 105 PMVFRNLRELFGIDPADYLLSLCGNPPLRELSSPGKSGSFFYLSYDDRFIIKTVRKSEVKVLLKMLPGYYQHVVEQNNRT 184 (420)
T ss_pred hHHHHHHHHHhCCChHHHHHHHhcchhhhhccCCCCccceEEEecCceEEEEeccHHHHHHHHHHHHHHHHHHHccCCce
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999886655 9
Q ss_pred eeEeeEeeEEEEecCCeEEEEEEEeeeccCCCceeeEEEeeccCcCCccCCCccccCCCCcEeeCCCc---ccccCCHHH
Q 009288 456 LVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIHRRFDLKGSSYGRITDKPEEEIDETTTLKDLDLD---FVFRLDRSW 532 (538)
Q Consensus 456 LL~k~~Gl~~i~~~~~~~~~fvVM~N~f~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lKD~d~~---~~~~~~~~~ 532 (538)
|||||||||||++.+|+++|||||+|||++++.||++|||||||++|.|++ +++.++.|||||+||. +.|++++.|
T Consensus 185 Ll~kf~Gly~vk~~gg~k~yfvVM~Nlf~~~~~iH~kyDLKGSt~~R~ask-ke~~k~~pTlKDlDf~~~~~~~~l~~~~ 263 (420)
T KOG0229|consen 185 LLPKFFGLYRVKPDGGKKIYFVVMNNLFPSRLKVHRKYDLKGSTVGREASK-KEKIKELPTLKDLDFLNEGQKLYLGKEA 263 (420)
T ss_pred eehhhceeEEEeeCCCceEEEEEecccCCCccceeEEeecCCCcccccccc-hhhccCCCccccchhhccCceEecCHHH
Confidence 999999999999999999999999999999999999999999999999998 4567899999999999 899999999
Q ss_pred HHHHhC
Q 009288 533 FQELIR 538 (538)
Q Consensus 533 ~~~~~~ 538 (538)
+++||+
T Consensus 264 ~~~l~~ 269 (420)
T KOG0229|consen 264 KKALLK 269 (420)
T ss_pred HHHHHH
Confidence 999984
No 3
>cd00139 PIPKc Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate. CD alignment includes type II phosphatidylinositol phosphate kinases (PIPKII-beta), type I andII PIPK (-alpha, -beta, and -gamma) kinases and related yeast Fab1p and Mss4p kinases. Signaling by phosphorylated species of phosphatidylinositol regulates secretion, vesicular trafficking, membrane translocation, cell adhesion, chemotaxis, DNA synthesis, and cell cycling. The catalytic core domains of PIPKs are structurally similar to PI3K, PI4K, and cAMP-dependent protein kinases (PKA), the dimerization region is a unique feature of the PIPKs.
Probab=100.00 E-value=4.1e-60 Score=484.94 Aligned_cols=220 Identities=53% Similarity=0.845 Sum_probs=205.7
Q ss_pred cHHHHHHHHHHHHhhhcCC-Cccc-ccCCcccCCCceeeEeeCCCCCCCCCCCCccCCeEEEEcCHHHHHHHHHHhCCCh
Q 009288 314 NYDLMLNLQLGIRHSVGKH-ASVM-RELRQSDFEPKEKFWTRFPPEGSKFTPPHQSMDFRWKDYCPMVFRHLRELFAIDP 391 (538)
Q Consensus 314 ~~~l~~~~~~Gi~~~i~~~-~~~~-~~l~~~df~~~~k~~~~f~~~~~~~~~~~~~~~f~~k~y~P~~F~~lR~~~~i~~ 391 (538)
+|+||++||||||+||+++ +.+. ++|+++||++++++. ||++|+..||+|...+|+|++|||.||++||++|||++
T Consensus 1 ~~~l~~~~~~Gi~~~v~~~~~~~~~~~l~~~Df~~~~~~~--~~~~~~~~~~~~~~~~f~fk~Y~P~vF~~lR~~~gi~~ 78 (313)
T cd00139 1 SYPLMSNLQLGIRHSVGELSSVPSPRDLLPDDFKAKSKIK--FPNHGSHLTPPHLSADFKFKDYCPEVFRALRELFGIDE 78 (313)
T ss_pred ChHHHHHHHHHHHHHhhhcccCCccccCchhhhhheEEEE--cCCCCCcccCCCCCccEEEEEeCHHHHHHHHHHcCCCH
Confidence 5899999999999999999 3333 799999999999887 99999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCcccccccCCCCccceEEEeeCCcEEEEecCHHHHHHHHHHHHHHHHHhhcCC-CceeEeeEeeEEEEec-
Q 009288 392 ADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYK-NTLVTKFFGVHCVKPV- 469 (538)
Q Consensus 392 ~~y~~Sl~~~~~~~~~~s~GkSgs~f~~t~D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~-~tLL~k~~Gl~~i~~~- 469 (538)
++|+.|||++. +.++.|+|||||+||+|+|+|||||||+++|+++|+++||.||+||.+|| +||||||||||+|++.
T Consensus 79 ~dy~~Sl~~~~-~~e~~s~GKSGs~F~~T~D~rfiIKti~~~E~~~l~~~Lp~Y~~~~~~n~~~TLL~k~~Gl~~i~~~~ 157 (313)
T cd00139 79 ADYLRSLCRSP-LWELSSGGKSGSFFYKTLDDRFIIKTVSHSEIESLLKFLPNYYEYITQNPQNTLLPKFFGLYRVKVKS 157 (313)
T ss_pred HHHHHHhcCCC-CccCCCCCCCCCEEEEecCCcEEEEecCHHHHHHHHHHHHHHHHHHHhCCCCcchhhheEEEEEEEcC
Confidence 99999999765 78899999999999999999999999999999999999999999999999 9999999999999987
Q ss_pred -CCeEEEEEEEeeeccCCCceeeEEEeeccCcCCccCCCccccCCCCcEeeCCCcc----cccCCHHHHHHHh
Q 009288 470 -GGQKTRFIVMGNLFCSEYRIHRRFDLKGSSYGRITDKPEEEIDETTTLKDLDLDF----VFRLDRSWFQELI 537 (538)
Q Consensus 470 -~~~~~~fvVM~N~f~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lKD~d~~~----~~~~~~~~~~~~~ 537 (538)
.++++|||||+|||+++..||++||||||+++|.+++++ ..++.+||||+||.. .+++++.++++|+
T Consensus 158 ~~~~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~-~~~~~~vlKD~df~~~~~~~i~l~~~~k~~l~ 229 (313)
T cd00139 158 GTGKKVDFLVMENLFYSRLKIHRKYDLKGSTRNREASKKE-KQKENPVLKDLNLLEMIEQPLFVGEHSKKALL 229 (313)
T ss_pred CCCceEEEEEEecCCCCCccceEEEECCCCCCCCCcCccc-ccCCccccchhhhHhhcCceEEeCHHHHHHHH
Confidence 468999999999999988999999999999999998754 346889999999988 7889999998886
No 4
>smart00330 PIPKc Phosphatidylinositol phosphate kinases.
Probab=100.00 E-value=9e-50 Score=413.58 Aligned_cols=194 Identities=54% Similarity=0.874 Sum_probs=180.4
Q ss_pred CcccCCCceeeEeeCCCCCCCCCCCCccCCeEEEEcCHHHHHHHHHHhCCChHHHHHhhcCCcccccccCCCCccceEEE
Q 009288 340 RQSDFEPKEKFWTRFPPEGSKFTPPHQSMDFRWKDYCPMVFRHLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFYL 419 (538)
Q Consensus 340 ~~~df~~~~k~~~~f~~~~~~~~~~~~~~~f~~k~y~P~~F~~lR~~~~i~~~~y~~Sl~~~~~~~~~~s~GkSgs~f~~ 419 (538)
+++||++.+|+++.++.. ++.+|+|++..|+|++|||.+|++||+++||++++|+.|||++.. +++.|+|||||+||+
T Consensus 1 ~~~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Y~P~~F~~lR~~~~i~~~~y~~Sl~~~~~-~~~~s~GKSGs~F~~ 78 (342)
T smart00330 1 LPSDFKATEKIKFPTPGH-LELTPSHGSADFKFKDYCPEVFRNLRELFGIDPADYLRSLCRSPP-LELSSGGKSGSFFYL 78 (342)
T ss_pred CccccccceeEeecCCCc-ccccCCCCCccEEEEEeCHHHHHHHHHHcCCCHHHHHHHhCCCCc-cccCCCCCCCCEEEE
Confidence 478999999999777776 799999999999999999999999999999999999999997653 678999999999999
Q ss_pred eeCCcEEEEecCHHHHHHHHHHHHHHHHHhhcCCCceeEeeEeeEEEEecCC--eEEEEEEEeeeccCCCceeeEEEeec
Q 009288 420 TQDDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGG--QKTRFIVMGNLFCSEYRIHRRFDLKG 497 (538)
Q Consensus 420 t~D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~--~~~~fvVM~N~f~~~~~i~~~yDLKG 497 (538)
|.|+|||||||+++|+++|+++||.||+||..||+|||+||||||+|++.++ .++|||||+|||++...|+++|||||
T Consensus 79 T~D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~n~~SlL~ki~Gly~i~~~~~~~~~~~fiVM~NlF~~~~~i~~~yDLKG 158 (342)
T smart00330 79 SLDDRFIIKTVSKSEIKSLLPMLPNYYEHIVQNPNTLLPKFFGLYRVKVKGGTEKKIYFLVMENLFYSDLKVHRKYDLKG 158 (342)
T ss_pred ecCCcEEEEecCHHHHHHHHHHHHHHHHHHHhCCCcchhhhcEEEEEEECCCcceeEEEEEEecCCCCCCceeEEEECCC
Confidence 9999999999999999999999999999999999999999999999998876 69999999999998889999999999
Q ss_pred cCcCCccCCCccccCCCCcEeeCCCc----ccccCCHHHHHHHh
Q 009288 498 SSYGRITDKPEEEIDETTTLKDLDLD----FVFRLDRSWFQELI 537 (538)
Q Consensus 498 S~~~R~~~~~~~~~~~~~~lKD~d~~----~~~~~~~~~~~~~~ 537 (538)
|+++|.+++ +..++.+||||+||. ..+++.+..+++|+
T Consensus 159 S~~~R~~~~--~~~~~~~vlkD~df~~~~~~~i~l~~~~k~~l~ 200 (342)
T smart00330 159 STRGREADK--KKVKELPVLKDLDLVEMWNQPIYVDPLAKKALL 200 (342)
T ss_pred CCCCCCcCc--cccCCCCcccccchhhccCCeEEECHHHHHHHH
Confidence 999999976 344678999999998 56899999888876
No 5
>PLN03185 phosphatidylinositol phosphate kinase; Provisional
Probab=100.00 E-value=1.8e-37 Score=345.55 Aligned_cols=174 Identities=33% Similarity=0.699 Sum_probs=169.4
Q ss_pred CceEEEEEcCCCCEEEEEEECCEEeeeEEEEEcCCcEEEEEEECCeEeceeEEEeCCCCeEEEEEeCCeeeeeeEEEeec
Q 009288 46 GGVVVEKILPNGDLYTGAVSGNAPHGVGKYVWSDRCMYEGEWRKGRASGKGKFSWPSGATYEGGFKSGRMDGEGTFVGVE 125 (538)
Q Consensus 46 ~~~~~~~~~~nG~~Y~G~~~~g~~~G~G~~~~~dG~~YeG~w~~G~~~G~G~~~~~~G~~YeG~f~~g~~~G~G~~~~~n 125 (538)
..+.+.+.++||.+|+|+|.++++||.|++.|++|.+|+|+|.+|++||.|++++++|.+|+|+|++|++||.|+++++|
T Consensus 20 ~hG~G~~~~~DG~~YeGew~~Gk~hG~G~~~~~nG~~YeGeF~nG~~hG~G~~~~~~G~~YeG~w~~gkkhG~G~~~y~n 99 (765)
T PLN03185 20 PEGPGKYLWSDGCMYEGEWRRGMRHGNGKISWPSGATYEGEFSGGYMHGSGTYTGTDGTTYKGRWRLNLKHGLGYQRYPN 99 (765)
T ss_pred cccceEEEECCCCEEEEEEECCEeeCcEeEEeCCCCEEEEEEECCEEeceEEEEecCCCEEEEEEeCCcccceeEEEEec
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeeeecceeeccceeeecCCCEEEEEEecceEeeeEEEEEcCCCEEEEEEeCCeEeeeEEEEecCCCEEEEEEECC
Q 009288 126 GDTYRGSWSNDRKHGYGEKRYANGDVYRGSWRFNLMDGYGKYAWSDGNVYEGEWKNGVIFGKGTLSWNNGNRYEGCWDNG 205 (538)
Q Consensus 126 G~~Y~G~~~~g~~~G~G~~~~~nG~~YeG~w~~g~~~G~G~~~~~nG~~Y~G~w~~G~~~G~G~~~~~nG~~yeG~w~~G 205 (538)
|++|+|+|++|++||.|++.++||.+|+|+|++|++||.|+++|+||++|+|+|.+|++||.|+++|+||..|+|.|++|
T Consensus 100 G~vYeG~wk~G~~~G~G~y~~~nG~~Y~Gefk~Gk~~G~G~l~~~nG~~YeG~w~nG~~hG~G~y~~~DG~~Y~G~W~~G 179 (765)
T PLN03185 100 GDVFEGSWIQGLQEGPGKYTWANGNVYLGDMKGGKMSGKGTLTWVSGDSYEGQWLDGMMHGFGVYTWSDGGCYVGTWTRG 179 (765)
T ss_pred chhhhhhhhcCceecceeeeccCCCeEEEEecCCEEecCEEEEEeCCCeEEEEEeCCcceeeEEEEECCCCEEEEEeeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeEEEEeCCCCc
Q 009288 206 LPKGKGVFTWSNHEN 220 (538)
Q Consensus 206 ~~~G~G~~~~~dG~~ 220 (538)
++||.|+|+ ++|+.
T Consensus 180 ~~~G~G~~y-~~G~~ 193 (765)
T PLN03185 180 LKDGKGVFY-PAGSR 193 (765)
T ss_pred ceEeEEEEE-ECCCc
Confidence 999999995 67664
No 6
>COG5253 MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-39 Score=332.67 Aligned_cols=202 Identities=36% Similarity=0.528 Sum_probs=162.9
Q ss_pred cCCCcEEecCCCcHHHHHHHHHHHHhhhcCCCcccccCCcccCCCceeeEeeCCCCCCCCCCCCccCCeEEEEcCHHHHH
Q 009288 302 KKPGHTISKGHKNYDLMLNLQLGIRHSVGKHASVMRELRQSDFEPKEKFWTRFPPEGSKFTPPHQSMDFRWKDYCPMVFR 381 (538)
Q Consensus 302 ~~~g~~i~~gh~~~~l~~~~~~Gi~~~i~~~~~~~~~l~~~df~~~~k~~~~f~~~~~~~~~~~~~~~f~~k~y~P~~F~ 381 (538)
.--|-.|-.||+++-...+|..|||.++.++...+.. .-|-...+. ||. ....|+||+|||.+||
T Consensus 283 ~l~~~~le~gh~n~~~synmltgirvtlsr~e~iM~~--~tdth~~e~----~~e---------g~~~~s~K~y~~e~Fr 347 (612)
T COG5253 283 LLNGMPLEGGHRNPQESYNMLTGIRVTLSRIEEIMIK--KTDTHLNEQ----FEE---------GLYEFSCKDYFPEVFR 347 (612)
T ss_pred hccccccccccccchhhhhhhhhhHHHHHHHHHHhcC--CcCccchhh----ccc---------cceeeeHHhhCHHHHH
Confidence 3345568889999999999999999999988433322 223332222 221 2367999999999999
Q ss_pred HHHHHhCCChHHHHHhhcCCcccccccCCCCccceEEEeeCCcEEEEecCHHHHHHHHHHHHHHHHHhhcCCCceeEeeE
Q 009288 382 HLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFF 461 (538)
Q Consensus 382 ~lR~~~~i~~~~y~~Sl~~~~~~~~~~s~GkSgs~f~~t~D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~ 461 (538)
.||.+||++++ ++.++ ....|.|+. +||||||||+|.|.|||||||+++|+.+|+.++-.||.|+..||+|||||||
T Consensus 348 ~lR~l~g~~~a-lvsl~-sryil~E~~-~GKSGSff~~trD~kfIiKti~hsE~~~~r~~~~eY~~~V~~np~T~l~ki~ 424 (612)
T COG5253 348 ELRALCGCDEA-LVSLL-SRYILWESN-GGKSGSFFLFTRDYKFIIKTISHSEHICFRPMIFEYYVHVLFNPLTLLCKIF 424 (612)
T ss_pred HHHHHhCCcHH-HHHHH-hhhheeccC-CCcccceEEEeccchhhhhhhhhhhHHHHHHHHHHHHHHHHcCchHHHHHHh
Confidence 99999999998 54444 345566654 9999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEecCC------eEEEEEEEeeeccCCCceeeEEEeeccCcCCccCCCccccCCCCcEeeCCC
Q 009288 462 GVHCVKPVGG------QKTRFIVMGNLFCSEYRIHRRFDLKGSSYGRITDKPEEEIDETTTLKDLDL 522 (538)
Q Consensus 462 Gl~~i~~~~~------~~~~fvVM~N~f~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lKD~d~ 522 (538)
|+|+|++..+ .++|||||+|||++.. ||++||||||+.+|.++..........+.||+|+
T Consensus 425 G~yrv~~~~s~~~~k~~K~~fiVMeNlf~~~~-i~~ifDLKGS~~Nr~ve~~gk~~s~l~~mndv~w 490 (612)
T COG5253 425 GFYRVKSRSSISSSKSRKIYFIVMENLFYPHG-IHRIFDLKGSMRNRHVERTGKSMSVLLDMNDVEW 490 (612)
T ss_pred ceeEEeccccccccccceeEEEEecccCCCCC-cceEEeccCchhhhhhhhhccccchhccchhHHH
Confidence 9999998776 8999999999999885 9999999999999988663322222344444444
No 7
>PF01504 PIP5K: Phosphatidylinositol-4-phosphate 5-Kinase; InterPro: IPR002498 This entry represents a conserved region from the common kinase core found in the type I phosphatidylinositol-4-phosphate 5-kinase (PIP5K) family as described in []. This region is found in I, II and III phosphatidylinositol-4-phosphate 5-kinases (PIP5K enzymes). PIP5K catalyses the formation of phosphoinositol-4,5-bisphosphate via the phosphorylation of phosphatidylinositol-4-phosphate a precursor in the phosphinositide signalling pathway.; GO: 0016307 phosphatidylinositol phosphate kinase activity, 0046488 phosphatidylinositol metabolic process; PDB: 1BO1_A 2GK9_C 2YBX_B.
Probab=100.00 E-value=7.8e-37 Score=306.11 Aligned_cols=141 Identities=42% Similarity=0.750 Sum_probs=101.9
Q ss_pred HhhcCCcccccccCCCCccceEEEeeCCcEEEEecCHHHHHHHHHHHHHHHHHhhcCCCceeEeeEeeEEEEecCC-eEE
Q 009288 396 LAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGG-QKT 474 (538)
Q Consensus 396 ~Sl~~~~~~~~~~s~GkSgs~f~~t~D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~-~~~ 474 (538)
+|||+...+++..|+|||||+||+|.|+|||||||+++|+++|+++||+||+||.+||+|||+||||||+|+..++ +++
T Consensus 1 ~sl~~~~~~~~~~s~GKSGs~F~~T~D~kfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~SlL~r~~Gl~~i~~~~~~~~~ 80 (252)
T PF01504_consen 1 MSLCNLSSLSEKSSGGKSGSFFFFTSDGKFIIKTISKSEFKFLLKILPAYFEHMSENPNSLLPRFYGLYSIKKSNGKEKI 80 (252)
T ss_dssp ----------ES---SSSSS-EEE-TTSSEEEEEE-HHHHHHHHHHHHHHHHHHHHTTTSSS--EEEEEEE-EETT-EEE
T ss_pred CCccccccccccCCCCCccCEEEEeCCCCEEEEeCCHHHHHHHHHHHHHHHHHHHhCcCchHHHHHHHheecccCCceeE
Confidence 4899888999999999999999999999999999999999999999999999999999999999999999976666 999
Q ss_pred EEEEEeeeccCCCceeeEEEeeccCcCCccCCCccccCCCCcEeeCCCc---ccccCCHHHHHHHh
Q 009288 475 RFIVMGNLFCSEYRIHRRFDLKGSSYGRITDKPEEEIDETTTLKDLDLD---FVFRLDRSWFQELI 537 (538)
Q Consensus 475 ~fvVM~N~f~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lKD~d~~---~~~~~~~~~~~~~~ 537 (538)
|||||+|||++...|+++||||||+++|.+.+ ++..+..+||||+||. ..++|.+..++.|+
T Consensus 81 ~fvVM~N~f~~~~~i~~~yDLKGs~~~R~~~~-~~~~~~~~~lkD~df~~~~~~i~l~~~~~~~l~ 145 (252)
T PF01504_consen 81 YFVVMENLFYTPRNIHERYDLKGSTVGRKAKK-KDREQTEPVLKDLDFIESKRKIHLGPEQKEELL 145 (252)
T ss_dssp EEEEEE-SS-SSS--SEEEEE--SSSSS-S-C-HHHCSSS-EEEHHHHHHTT--SBS-SCHHHHHH
T ss_pred EEEEECCCccCCcccceEEecCCcccCCCCCc-cccccccceeecccccccCcEEEeChHHHHHHH
Confidence 99999999999889999999999999999986 3344568999999998 77899888877775
No 8
>KOG0230 consensus Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins [Signal transduction mechanisms]
Probab=99.95 E-value=3.3e-28 Score=277.66 Aligned_cols=160 Identities=30% Similarity=0.474 Sum_probs=143.8
Q ss_pred CCeEEEEcCHHHHHHHHHHhCCChHHHHHhhcCCcccccccCCCCccceEEEeeCCcEEEEecCHHHHHHHHHHHHHHHH
Q 009288 368 MDFRWKDYCPMVFRHLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYYQ 447 (538)
Q Consensus 368 ~~f~~k~y~P~~F~~lR~~~~i~~~~y~~Sl~~~~~~~~~~s~GkSgs~f~~t~D~rfiiKti~~~E~~~l~~~lp~Y~~ 447 (538)
..|.+|.|.+..|+.||++++-++++|+.||+++..|. +.+|||||+|+.|-|+|||||.|++.|++.|++++|+||+
T Consensus 1324 ~k~svk~~yAe~F~~LR~~c~~sEe~fIrSLsRc~~W~--aqGGKSgs~F~KTlDDRFIiKq~sk~EleSFikFAP~YFk 1401 (1598)
T KOG0230|consen 1324 AKYSVKCYYAEQFRALRKICCPSEEDFIRSLSRCVKWE--AQGGKSGSFFAKTLDDRFIIKQMSKTELESFIKFAPAYFK 1401 (1598)
T ss_pred eEEEEEEEehhhHHHHHHhhCchHHHHHHHHhcCcccc--cCCCcccceeeccccchhhhhhccHHHHHHHHhhhHHHHH
Confidence 56889999999999999999999999999999998877 8999999999999999999999999999999999999999
Q ss_pred Hhhc----CCCceeEeeEeeEEEEecC---C--eEEEEEEEeeeccCCCceeeEEEeeccCcCCccCCCccccCCCCcEe
Q 009288 448 HVCQ----YKNTLVTKFFGVHCVKPVG---G--QKTRFIVMGNLFCSEYRIHRRFDLKGSSYGRITDKPEEEIDETTTLK 518 (538)
Q Consensus 448 ~~~~----~~~tLL~k~~Gl~~i~~~~---~--~~~~fvVM~N~f~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lK 518 (538)
||.+ -..|.|+||||+|+|.++. + -|+-++||+|||+.+ .+.++||||||+++|.+.... ....||.
T Consensus 1402 Yl~~s~~~~~PT~LAKIlGiyqV~vK~~~sgke~K~DvmVMENLfY~r-~vsRifDLKGS~RnR~v~~t~---~~d~VLL 1477 (1598)
T KOG0230|consen 1402 YLTESISQKSPTCLAKILGIYQVSVKSPKSGKETKMDVMVMENLFYGR-KVSRIFDLKGSLRNRYVPTTS---GADEVLL 1477 (1598)
T ss_pred HHHHHHhcCCcchhhhhheeEEEEEecCCCCceeEeeeeeehhhhhcc-ccceeeeccchhhhccCCCCC---CCceEEe
Confidence 9973 2449999999999998653 4 578899999999987 899999999999999997743 5789999
Q ss_pred eCCCcccccCCHHHH
Q 009288 519 DLDLDFVFRLDRSWF 533 (538)
Q Consensus 519 D~d~~~~~~~~~~~~ 533 (538)
|-||...++-.|.+.
T Consensus 1478 DeNlVe~~~~sPIfV 1492 (1598)
T KOG0230|consen 1478 DENLVEMMWTSPIYV 1492 (1598)
T ss_pred cHHHHhhhhcCCeee
Confidence 999998877666543
No 9
>COG4642 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=99.80 E-value=4e-19 Score=157.30 Aligned_cols=132 Identities=29% Similarity=0.543 Sum_probs=101.7
Q ss_pred CcEEEEEEECCeEeceeEEEeCCCCeEEEEEeCCeeeeeeEEEeecCCEEEeeeecceeeccceeeecCCCEEEEEEecc
Q 009288 80 RCMYEGEWRKGRASGKGKFSWPSGATYEGGFKSGRMDGEGTFVGVEGDTYRGSWSNDRKHGYGEKRYANGDVYRGSWRFN 159 (538)
Q Consensus 80 G~~YeG~w~~G~~~G~G~~~~~~G~~YeG~f~~g~~~G~G~~~~~nG~~Y~G~~~~g~~~G~G~~~~~nG~~YeG~w~~g 159 (538)
+..|++.|..++..|.+++..+.++++.|.++.++..|.|++.+.+|..|+|.++|++.+|.|+..++||++|+|.|.++
T Consensus 8 g~~y~~~~~~g~~~g~s~~~~~~car~~g~~kqg~~~Gkgs~~~~~G~~Y~Gtl~ngk~nGqG~~~~~ngd~Y~g~F~s~ 87 (139)
T COG4642 8 GLRYEGFFVRGKLEGLSTYDILGCARVGGSLKQGKLAGKGSLKYDNGRIYTGTLKNGKMNGQGTYTFANGDIYEGPFNSG 87 (139)
T ss_pred heeeeeEEecccccccceEEeccccEEeeeEeeeecCCCccEEEcCCccccceEEcCcccCcEEEEecCCCeEeccccCc
Confidence 45677777777777777777777777777777777777777777777777777777777777777777778888888888
Q ss_pred eEeeeEEEEEcCCCEEEEEEeCCeEeeeEEEEecCCCEEEEEEECCeeeeeE
Q 009288 160 LMDGYGKYAWSDGNVYEGEWKNGVIFGKGTLSWNNGNRYEGCWDNGLPKGKG 211 (538)
Q Consensus 160 ~~~G~G~~~~~nG~~Y~G~w~~G~~~G~G~~~~~nG~~yeG~w~~G~~~G~G 211 (538)
+.+|.|++...+|..|+|.|.+|...|.|.+..++|.+|+|.++.+++++.|
T Consensus 88 ~F~g~G~~~~~~Gw~~~G~F~~Gq~~g~g~l~~~~g~vy~G~fk~g~f~~~~ 139 (139)
T COG4642 88 KFRGQGTRGSFNGWLYIGRFTEGQANGKGFLLKEDGSVYTGMFKQGRFPKNG 139 (139)
T ss_pred cccceEeeccccCCEEeeeecccccCCceeEEecCCcEEeeeEEeeecCCCC
Confidence 8888888877788888888888888888888888888888888887777653
No 10
>COG4642 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=99.78 E-value=1.7e-18 Score=153.33 Aligned_cols=134 Identities=29% Similarity=0.542 Sum_probs=129.5
Q ss_pred CCCCEEEEEEECCEEeeeEEEEEcCCcEEEEEEECCeEeceeEEEeCCCCeEEEEEeCCeeeeeeEEEeecCCEEEeeee
Q 009288 55 PNGDLYTGAVSGNAPHGVGKYVWSDRCMYEGEWRKGRASGKGKFSWPSGATYEGGFKSGRMDGEGTFVGVEGDTYRGSWS 134 (538)
Q Consensus 55 ~nG~~Y~G~~~~g~~~G~G~~~~~dG~~YeG~w~~G~~~G~G~~~~~~G~~YeG~f~~g~~~G~G~~~~~nG~~Y~G~~~ 134 (538)
.-+..|++.|..++..|.+++...++.++.|.++.++..|.|.+.+.+|..|+|.++|++++|.|+++++|++.|+|.|.
T Consensus 6 a~g~~y~~~~~~g~~~g~s~~~~~~car~~g~~kqg~~~Gkgs~~~~~G~~Y~Gtl~ngk~nGqG~~~~~ngd~Y~g~F~ 85 (139)
T COG4642 6 AFGLRYEGFFVRGKLEGLSTYDILGCARVGGSLKQGKLAGKGSLKYDNGRIYTGTLKNGKMNGQGTYTFANGDIYEGPFN 85 (139)
T ss_pred hhheeeeeEEecccccccceEEeccccEEeeeEeeeecCCCccEEEcCCccccceEEcCcccCcEEEEecCCCeEecccc
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeccceeeecCCCEEEEEEecceEeeeEEEEEcCCCEEEEEEeCCeEeeeE
Q 009288 135 NDRKHGYGEKRYANGDVYRGSWRFNLMDGYGKYAWSDGNVYEGEWKNGVIFGKG 188 (538)
Q Consensus 135 ~g~~~G~G~~~~~nG~~YeG~w~~g~~~G~G~~~~~nG~~Y~G~w~~G~~~G~G 188 (538)
+++.+|.|+....+|..|.|.|..++.+|.|.+...++.+|.|.++.+++++.|
T Consensus 86 s~~F~g~G~~~~~~Gw~~~G~F~~Gq~~g~g~l~~~~g~vy~G~fk~g~f~~~~ 139 (139)
T COG4642 86 SGKFRGQGTRGSFNGWLYIGRFTEGQANGKGFLLKEDGSVYTGMFKQGRFPKNG 139 (139)
T ss_pred CccccceEeeccccCCEEeeeecccccCCceeEEecCCcEEeeeEEeeecCCCC
Confidence 999999999999999999999999999999999999999999999999998754
No 11
>KOG0231 consensus Junctional membrane complex protein Junctophilin and related MORN repeat proteins [General function prediction only]
Probab=99.77 E-value=3.6e-19 Score=191.85 Aligned_cols=174 Identities=32% Similarity=0.607 Sum_probs=161.8
Q ss_pred CceEEEEEcCCCCEEEEEEECCEEeeeEEEEEcCCcEEEEEEECCeEeceeEEEeCCCCeEEEEEeCC----eeeeeeEE
Q 009288 46 GGVVVEKILPNGDLYTGAVSGNAPHGVGKYVWSDRCMYEGEWRKGRASGKGKFSWPSGATYEGGFKSG----RMDGEGTF 121 (538)
Q Consensus 46 ~~~~~~~~~~nG~~Y~G~~~~g~~~G~G~~~~~dG~~YeG~w~~G~~~G~G~~~~~~G~~YeG~f~~g----~~~G~G~~ 121 (538)
........++||++|+|+|.+++++|.|++.++||..|+|+|.++++||+|++.+|+|.+|+|.|+++ ..+|.+.+
T Consensus 131 ~~g~g~~~~~~g~~Y~G~~~~~k~sG~Gv~~~~~G~~Y~Gew~~n~~hG~G~~~~pdGsk~eg~~~~~~l~~l~~gk~~~ 210 (455)
T KOG0231|consen 131 RSGEGVIELPTGDTYEGEFKRGKRSGFGVYIRSDGLKYEGEWLDNRRHGYGVLTFPDGSKYEGQYKNNILEALRHGKGRY 210 (455)
T ss_pred cCccceEecCCCCEEEeeecCCcccccceEEecCCCEeeceecCCCccCCCeEEccCCCEEEEEeecccccccccceEEE
Confidence 45667889999999999999999999999999999999999999999999999999999999999999 89999999
Q ss_pred Eeec----------CCEEEeeeec-ceeeccceeeecCCCEEEEEEecceEeeeEEEEEcCCCEEEEEEeCCeEeeeEEE
Q 009288 122 VGVE----------GDTYRGSWSN-DRKHGYGEKRYANGDVYRGSWRFNLMDGYGKYAWSDGNVYEGEWKNGVIFGKGTL 190 (538)
Q Consensus 122 ~~~n----------G~~Y~G~~~~-g~~~G~G~~~~~nG~~YeG~w~~g~~~G~G~~~~~nG~~Y~G~w~~G~~~G~G~~ 190 (538)
.+.+ ..+|.++|.. +..|+.+...+++|..|.+.|..+..+|.+++.+.++..|.|.|..+.++|.+++
T Consensus 211 ~~~~~~~~a~ra~~~~~~~~Ew~~~~~~~~~~~~e~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~g~~~~ 290 (455)
T KOG0231|consen 211 KFDDALEAAQRAATIARYSGEWAARGQSHGRGYAEAADGSAYAGQEDAGVARGLAKLHFPNGSGYVGEFKQDKKHGGGQF 290 (455)
T ss_pred EEeccchhhhhhhhhhhhhhhhhhhcCCCcceeEEeccccchhhhhhcCccccccceeccccccccCcceeccccCccee
Confidence 9886 5689999998 9999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCEEEEEEECCeeeeeEEEEeCCCC
Q 009288 191 SWNNGNRYEGCWDNGLPKGKGVFTWSNHE 219 (538)
Q Consensus 191 ~~~nG~~yeG~w~~G~~~G~G~~~~~dG~ 219 (538)
.+.++..+++.|..+.+.|.+.+++.++.
T Consensus 291 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~ 319 (455)
T KOG0231|consen 291 LFLNGSEYEGWFREGPKSGLGGFTFDKGP 319 (455)
T ss_pred eeccccccccccccCccccccccccCCCC
Confidence 99999999999999999999999999887
No 12
>KOG0231 consensus Junctional membrane complex protein Junctophilin and related MORN repeat proteins [General function prediction only]
Probab=99.71 E-value=1.5e-17 Score=179.40 Aligned_cols=172 Identities=27% Similarity=0.502 Sum_probs=155.2
Q ss_pred EEEEcCCCCEEEEEEECCEEeeeEEEEEcCCcEEEEEEECCeEeceeEEEeCCCCeEEEEEeCCeeeeeeEEEeecCCEE
Q 009288 50 VEKILPNGDLYTGAVSGNAPHGVGKYVWSDRCMYEGEWRKGRASGKGKFSWPSGATYEGGFKSGRMDGEGTFVGVEGDTY 129 (538)
Q Consensus 50 ~~~~~~nG~~Y~G~~~~g~~~G~G~~~~~dG~~YeG~w~~G~~~G~G~~~~~~G~~YeG~f~~g~~~G~G~~~~~nG~~Y 129 (538)
.+..-++...|.|.. +...|.|...++++++|+|+|.+++++|.|+..+++|..|+|+|.++++||+|++++++|.+|
T Consensus 114 ~~~~~~~~~~~~~~~--~~~~g~g~~~~~~g~~Y~G~~~~~k~sG~Gv~~~~~G~~Y~Gew~~n~~hG~G~~~~pdGsk~ 191 (455)
T KOG0231|consen 114 SELLSTDSGGEEGEE--GTRSGEGVIELPTGDTYEGEFKRGKRSGFGVYIRSDGLKYEGEWLDNRRHGYGVLTFPDGSKY 191 (455)
T ss_pred cceecCCcccccccc--cccCccceEecCCCCEEEeeecCCcccccceEEecCCCEeeceecCCCccCCCeEEccCCCEE
Confidence 334444445555554 677889999999999999999999999999999999999999999999999999999999999
Q ss_pred Eeeeecc----eeeccceeeecC----------CCEEEEEEec-ceEeeeEEEEEcCCCEEEEEEeCCeEeeeEEEEecC
Q 009288 130 RGSWSND----RKHGYGEKRYAN----------GDVYRGSWRF-NLMDGYGKYAWSDGNVYEGEWKNGVIFGKGTLSWNN 194 (538)
Q Consensus 130 ~G~~~~g----~~~G~G~~~~~n----------G~~YeG~w~~-g~~~G~G~~~~~nG~~Y~G~w~~G~~~G~G~~~~~n 194 (538)
+|.|.++ .+||.+.+.+.+ ..+|.++|.. +..|+.+.+...+|..|.+.|..+..+|.+.+.++|
T Consensus 192 eg~~~~~~l~~l~~gk~~~~~~~~~~~a~ra~~~~~~~~Ew~~~~~~~~~~~~e~~~g~~~~~~~~~~~~~g~~~~~~~~ 271 (455)
T KOG0231|consen 192 EGQYKNNILEALRHGKGRYKFDDALEAAQRAATIARYSGEWAARGQSHGRGYAEAADGSAYAGQEDAGVARGLAKLHFPN 271 (455)
T ss_pred EEEeecccccccccceEEEEEeccchhhhhhhhhhhhhhhhhhhcCCCcceeEEeccccchhhhhhcCccccccceeccc
Confidence 9999999 899999999986 6799999988 999999999999999999999999999999999999
Q ss_pred CCEEEEEEECCeeeeeEEEEeCCCCcccC
Q 009288 195 GNRYEGCWDNGLPKGKGVFTWSNHENMKN 223 (538)
Q Consensus 195 G~~yeG~w~~G~~~G~G~~~~~dG~~y~~ 223 (538)
+..|.|.|..+.++|.+++.+.++..+..
T Consensus 272 ~~~~~g~~~~~~~~g~~~~~~~~~~~~e~ 300 (455)
T KOG0231|consen 272 GSGYVGEFKQDKKHGGGQFLFLNGSEYEG 300 (455)
T ss_pred cccccCcceeccccCcceeeecccccccc
Confidence 99999999999999999999999998843
No 13
>COG2849 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.03 E-value=0.00012 Score=72.80 Aligned_cols=129 Identities=22% Similarity=0.287 Sum_probs=96.0
Q ss_pred eceeEEEeCCCC-eEEEEEeCCeeeeeeEEEeecCCEE-EeeeecceeeccceeeecCCC-EEEEEEecceEeeeEEEEE
Q 009288 93 SGKGKFSWPSGA-TYEGGFKSGRMDGEGTFVGVEGDTY-RGSWSNDRKHGYGEKRYANGD-VYRGSWRFNLMDGYGKYAW 169 (538)
Q Consensus 93 ~G~G~~~~~~G~-~YeG~f~~g~~~G~G~~~~~nG~~Y-~G~~~~g~~~G~G~~~~~nG~-~YeG~w~~g~~~G~G~~~~ 169 (538)
+|.-..+.++|. ...-.+++|.++|.-..++++|... .-.|++|+.||.-..+|+||. .++..|+++.++|.-+.++
T Consensus 86 ~g~~~~~~~ng~~~~~~~~kNG~~~g~~~~~y~nGk~~~~~~~~ng~~~G~~~~yy~nG~~~~e~~~kn~~~~g~~k~yy 165 (230)
T COG2849 86 TGIVEKYYENGELEAAIYYKNGKLDGETKEFYENGKLKSEYNYKNGKLHGIQKEYYENGKLKSETVYKNGKLEGIAKTYY 165 (230)
T ss_pred cceeeEeecCCeEEEEEEecCCceeeeEEEEEcCCcEeEEEEecCCcccceEEEEEcCCCEEEEEEEeCCCccccEEEEc
Confidence 444445555555 3556677788887777777777643 466778888888888888877 4688888888778888888
Q ss_pred cCCC-EEEEEEeCCeEeeeEEEEecCCC-EEEEEEECCeeeeeEEEEeCCCCcc
Q 009288 170 SDGN-VYEGEWKNGVIFGKGTLSWNNGN-RYEGCWDNGLPKGKGVFTWSNHENM 221 (538)
Q Consensus 170 ~nG~-~Y~G~w~~G~~~G~G~~~~~nG~-~yeG~w~~G~~~G~G~~~~~dG~~y 221 (538)
++|. ..+-.+++|.++|.-..++.||. ..+..|++|+.+|.-.++...|.+-
T Consensus 166 ~nGkl~~e~~~knG~~~G~~k~Y~enGkl~~e~~~kng~~~G~~~~yde~G~~i 219 (230)
T COG2849 166 ENGKLLSEVPYKNGKKNGVVKIYYENGKLVEEVTYKNGKLDGVVKEYDEAGKLI 219 (230)
T ss_pred CCCcEEEeecccCCcccceEEEEccCCCEeEEEEecCCcccccEEEEecCCCEE
Confidence 8886 36677888888888888888887 6788888888888888777777654
No 14
>COG2849 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.02 E-value=0.00023 Score=70.81 Aligned_cols=139 Identities=20% Similarity=0.271 Sum_probs=119.3
Q ss_pred EeeeEEEEEcCC-cEEEEEEECCeEeceeEEEeCCCCe-EEEEEeCCeeeeeeEEEeecCC-EEEeeeecceeeccceee
Q 009288 69 PHGVGKYVWSDR-CMYEGEWRKGRASGKGKFSWPSGAT-YEGGFKSGRMDGEGTFVGVEGD-TYRGSWSNDRKHGYGEKR 145 (538)
Q Consensus 69 ~~G~G~~~~~dG-~~YeG~w~~G~~~G~G~~~~~~G~~-YeG~f~~g~~~G~G~~~~~nG~-~Y~G~~~~g~~~G~G~~~ 145 (538)
.+|.-.....+| ....-.+++|+++|.-...+++|.. -+-.|++|..+|.-..+++||. .++..|+++.+.|.-..+
T Consensus 85 ~~g~~~~~~~ng~~~~~~~~kNG~~~g~~~~~y~nGk~~~~~~~~ng~~~G~~~~yy~nG~~~~e~~~kn~~~~g~~k~y 164 (230)
T COG2849 85 FTGIVEKYYENGELEAAIYYKNGKLDGETKEFYENGKLKSEYNYKNGKLHGIQKEYYENGKLKSETVYKNGKLEGIAKTY 164 (230)
T ss_pred CcceeeEeecCCeEEEEEEecCCceeeeEEEEEcCCcEeEEEEecCCcccceEEEEEcCCCEEEEEEEeCCCccccEEEE
Confidence 466666666676 4577788999999999999999986 4668999999999999999998 579999999999999999
Q ss_pred ecCCCE-EEEEEecceEeeeEEEEEcCCC-EEEEEEeCCeEeeeEEEEecCCC-EEEEEEECCee
Q 009288 146 YANGDV-YRGSWRFNLMDGYGKYAWSDGN-VYEGEWKNGVIFGKGTLSWNNGN-RYEGCWDNGLP 207 (538)
Q Consensus 146 ~~nG~~-YeG~w~~g~~~G~G~~~~~nG~-~Y~G~w~~G~~~G~G~~~~~nG~-~yeG~w~~G~~ 207 (538)
|+||.+ .+-.+++|.++|.-..++.+|. ..+..|++|+++|.=..+..+|. +-+..+.+|..
T Consensus 165 y~nGkl~~e~~~knG~~~G~~k~Y~enGkl~~e~~~kng~~~G~~~~yde~G~~i~~~~y~~g~~ 229 (230)
T COG2849 165 YENGKLLSEVPYKNGKKNGVVKIYYENGKLVEEVTYKNGKLDGVVKEYDEAGKLIKETLYKNGKE 229 (230)
T ss_pred cCCCcEEEeecccCCcccceEEEEccCCCEeEEEEecCCcccccEEEEecCCCEEEEEEeeCCcC
Confidence 999984 7888999999999999999998 58899999999999999888888 45666677653
No 15
>smart00698 MORN Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
Probab=97.47 E-value=0.00019 Score=46.65 Aligned_cols=22 Identities=55% Similarity=1.161 Sum_probs=16.8
Q ss_pred EEEEEEECCeeeeeEEEEeCCC
Q 009288 197 RYEGCWDNGLPKGKGVFTWSNH 218 (538)
Q Consensus 197 ~yeG~w~~G~~~G~G~~~~~dG 218 (538)
+|+|+|++|++||.|+++|+|.
T Consensus 2 ~Y~G~w~~g~~hG~G~~~~~d~ 23 (26)
T smart00698 2 RYEGEWRNGKRHGRGVYTYANX 23 (26)
T ss_pred eEEEEEECCeEEeeEEEEeccc
Confidence 5778888888888888777764
No 16
>PF02493 MORN: MORN repeat; InterPro: IPR003409 The MORN (Membrane Occupation and Recognition Nexus) motif is found in multiple copies in several proteins including junctophilins (). The function of this motif is unknown.; PDB: 1H3I_B 1MT6_A 1N6C_A 3OS5_A 3M53_A 3M55_A 3CBP_A 4E47_B 3M58_A 3CBO_A ....
Probab=97.35 E-value=0.00016 Score=45.39 Aligned_cols=22 Identities=45% Similarity=1.023 Sum_probs=11.4
Q ss_pred EEEEEECCeeeeeEEEEeCCCC
Q 009288 198 YEGCWDNGLPKGKGVFTWSNHE 219 (538)
Q Consensus 198 yeG~w~~G~~~G~G~~~~~dG~ 219 (538)
|+|.|++|++||.|+++|+||.
T Consensus 1 Y~G~~~~g~~~G~G~~~~~~G~ 22 (23)
T PF02493_consen 1 YEGEWKNGKKHGYGVYTFPDGD 22 (23)
T ss_dssp ECCEEETTEEECEEEEE-TTS-
T ss_pred CEEEEEECcccccEEEEeCCCC
Confidence 4555555555555555555553
No 17
>smart00698 MORN Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
Probab=97.31 E-value=0.00036 Score=45.37 Aligned_cols=22 Identities=45% Similarity=1.013 Sum_probs=16.9
Q ss_pred EEEEEEeCCeEeeeEEEEecCC
Q 009288 174 VYEGEWKNGVIFGKGTLSWNNG 195 (538)
Q Consensus 174 ~Y~G~w~~G~~~G~G~~~~~nG 195 (538)
+|+|+|.+|++||.|+++|+|.
T Consensus 2 ~Y~G~w~~g~~hG~G~~~~~d~ 23 (26)
T smart00698 2 RYEGEWRNGKRHGRGVYTYANX 23 (26)
T ss_pred eEEEEEECCeEEeeEEEEeccc
Confidence 5788888888888888877764
No 18
>PF02493 MORN: MORN repeat; InterPro: IPR003409 The MORN (Membrane Occupation and Recognition Nexus) motif is found in multiple copies in several proteins including junctophilins (). The function of this motif is unknown.; PDB: 1H3I_B 1MT6_A 1N6C_A 3OS5_A 3M53_A 3M55_A 3CBP_A 4E47_B 3M58_A 3CBO_A ....
Probab=97.28 E-value=0.00023 Score=44.60 Aligned_cols=22 Identities=50% Similarity=1.087 Sum_probs=12.9
Q ss_pred EEEEEeCCeEeeeEEEEecCCC
Q 009288 175 YEGEWKNGVIFGKGTLSWNNGN 196 (538)
Q Consensus 175 Y~G~w~~G~~~G~G~~~~~nG~ 196 (538)
|+|+|.+|+++|.|+++++||+
T Consensus 1 Y~G~~~~g~~~G~G~~~~~~G~ 22 (23)
T PF02493_consen 1 YEGEWKNGKKHGYGVYTFPDGD 22 (23)
T ss_dssp ECCEEETTEEECEEEEE-TTS-
T ss_pred CEEEEEECcccccEEEEeCCCC
Confidence 5566666666666666666664
No 19
>PLN02667 inositol polyphosphate multikinase
Probab=68.01 E-value=11 Score=39.01 Aligned_cols=70 Identities=17% Similarity=0.267 Sum_probs=44.7
Q ss_pred eeCCcEEEEecC-----HHHHHHHHHHHHH--HHHHhhcCCCceeEeeEeeEEEEecCCeEEEEEEEeeeccCCCceeeE
Q 009288 420 TQDDRFMIKTVK-----KSEVKVLIRMLPS--YYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIHRR 492 (538)
Q Consensus 420 t~D~rfiiKti~-----~~E~~~l~~~lp~--Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~N~f~~~~~i~~~ 492 (538)
+.|+..|+|-+. ..|+++-..+... --.. -..++|+|+|...+....++ .+|||+||-..- .--.+
T Consensus 23 ~~~~g~~~Kp~~~~~rg~rE~~FY~~~~~~~~~~~~----L~~~~P~y~G~~~~~~~~~~--~~i~LeDLt~g~-~~PcV 95 (286)
T PLN02667 23 VDDSGRFYKPLQDDSRGEREAAFYESFSSDTRVPDH----IRRFFPVFHGTQLVEASDGS--GLLVLEDLLAGY-TKPCV 95 (286)
T ss_pred EcCCCcEEeccCCcccchHHHHHHHHHhccccchHH----HHhhCcccceeEeeccCCCc--eeEEehHHhcCC-CCCeE
Confidence 457778899997 6888876655411 0000 12688999999888655554 579999996422 11234
Q ss_pred EEee
Q 009288 493 FDLK 496 (538)
Q Consensus 493 yDLK 496 (538)
=|||
T Consensus 96 lDlK 99 (286)
T PLN02667 96 MDVK 99 (286)
T ss_pred EEEE
Confidence 5666
No 20
>PF12226 Astro_capsid_p: Turkey astrovirus capsid protein; InterPro: IPR022027 This family of proteins is found in viruses. Proteins in this family are typically between 241 and 261 amino acids in length. These proteins are capsid proteins from various astrovirus strains. ; PDB: 3TS3_D.
Probab=65.86 E-value=2.9 Score=39.37 Aligned_cols=53 Identities=21% Similarity=0.503 Sum_probs=31.7
Q ss_pred EEEcCHHHH---HHHHHHhCCChHHHHHhhcCCcccccccCCCCccceEEEeeCCcEEEEecCH
Q 009288 372 WKDYCPMVF---RHLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVKK 432 (538)
Q Consensus 372 ~k~y~P~~F---~~lR~~~~i~~~~y~~Sl~~~~~~~~~~s~GkSgs~f~~t~D~rfiiKti~~ 432 (538)
++.|.|..= ..|..+.++.+-|=+.|+. .+.|+-+++||.|.|.||||=.-+.
T Consensus 102 vkkYyP~TTnld~~lK~RlnL~EgDPViS~G--------Dt~GRRaALFYRtSdEr~ill~St~ 157 (230)
T PF12226_consen 102 VKKYYPGTTNLDQQLKDRLNLTEGDPVISMG--------DTTGRRAALFYRTSDERYILLFSTT 157 (230)
T ss_dssp EEEB-GGG--S-HHHHHHHT--TT-EEEEEE--------ETT--EEEEEEETTTTEEEEEEEES
T ss_pred hhhcCCCCccHHHHHHHhhccccCCceeeec--------CCCCceEEEEEeccCceEEEEEccC
Confidence 456666432 3677777777655444443 3569999999999999999854443
No 21
>PF07202 Tcp10_C: T-complex protein 10 C-terminus; InterPro: IPR009852 Proteins in this entry include T-complex 10, involved in spermatogenesis in mice, and centromere protein J, which not only inhibits microtubule nucleation from the centrosome, but also depolymerises taxol-stabilised microtubules [, ]. These proteins share an approximately 180 residue C-terminal region which contains unsual G repreats [].
Probab=55.58 E-value=2e+02 Score=27.68 Aligned_cols=13 Identities=31% Similarity=0.672 Sum_probs=6.8
Q ss_pred eeeEEEEecCCCE
Q 009288 185 FGKGTLSWNNGNR 197 (538)
Q Consensus 185 ~G~G~~~~~nG~~ 197 (538)
+|.-++.++||..
T Consensus 118 nG~k~i~~pnGq~ 130 (179)
T PF07202_consen 118 NGDKTITFPNGQK 130 (179)
T ss_pred CCcEEEEeCCCcE
Confidence 4445555566553
No 22
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=45.98 E-value=1e+02 Score=28.91 Aligned_cols=72 Identities=14% Similarity=0.235 Sum_probs=39.7
Q ss_pred CCCCccceEEEee-CCcEEEEecCHHHHHHHHHHHHHHHHHhhcCCCceeEeeEeeEEEEecCCeEEEEEEEeeec
Q 009288 409 SPGKSGSFFYLTQ-DDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLF 483 (538)
Q Consensus 409 s~GkSgs~f~~t~-D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~N~f 483 (538)
+.|.++..|.++. +++||||.........-...--..+.++..+.- -.|+++..-..... ....++||.-+-
T Consensus 6 ~~G~~n~~~~v~~~~~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~~~-pvP~~~~~~~~~~~--~~~~~~~~~~i~ 78 (239)
T PF01636_consen 6 SGGFSNRVYRVTTDDGRYVLKFYRPPDAAERLRREAAVLRQLAEHGI-PVPRVLAFDTSDEF--NGFPYLLMEYIP 78 (239)
T ss_dssp EESSSSEEEEEEETTSEEEEEEESSHHHHHHHHHHHHHHHHHHHTTS-BS--EEEEEEETEE--TSEEEEEEEEES
T ss_pred CCCCeeeEEEEEECCcEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCC-CCceEEeecccccc--cccceEEEEEec
Confidence 4577775666555 559999999887222222222234466665532 56777763322211 223788888764
No 23
>PRK10345 hypothetical protein; Provisional
Probab=45.23 E-value=86 Score=30.64 Aligned_cols=71 Identities=18% Similarity=0.286 Sum_probs=41.6
Q ss_pred CCCCccceEEEeeCCcEEEEecCHH---HHHHHHHHHHHHHHHhhc--CCCceeEeeEeeEEEEecCCeEEEEEEEee
Q 009288 409 SPGKSGSFFYLTQDDRFMIKTVKKS---EVKVLIRMLPSYYQHVCQ--YKNTLVTKFFGVHCVKPVGGQKTRFIVMGN 481 (538)
Q Consensus 409 s~GkSgs~f~~t~D~rfiiKti~~~---E~~~l~~~lp~Y~~~~~~--~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~N 481 (538)
..|.++..|--..|...+||.+... ..+.+++-+ .|+..+.. ..+.-|+++||.+.-. .+.-.++.+||+-
T Consensus 11 G~G~~~~Vy~hp~~~~k~IKv~~~~~~~~~~~~~rEi-~~l~~L~~~~~~h~nIvr~yg~~et~-~g~g~v~~~I~e~ 86 (210)
T PRK10345 11 GTGRHRKCYAHPEDAQRCIKIVYHRGDGGDKEIRREL-KYYAHLSRRLIDWSGIPRYYGTVETD-CGTGYVYDVIADF 86 (210)
T ss_pred cCCCceEEEECCCCcCeEEEEEeccccchHHHHHHHH-HHHHHhhccCCCCcccceeeEEEEeC-CCCeEEEEEEecC
Confidence 3466788886666888899998754 222222211 14555531 1234499999988654 2223455677873
No 24
>PF07202 Tcp10_C: T-complex protein 10 C-terminus; InterPro: IPR009852 Proteins in this entry include T-complex 10, involved in spermatogenesis in mice, and centromere protein J, which not only inhibits microtubule nucleation from the centrosome, but also depolymerises taxol-stabilised microtubules [, ]. These proteins share an approximately 180 residue C-terminal region which contains unsual G repreats [].
Probab=43.53 E-value=3.1e+02 Score=26.38 Aligned_cols=113 Identities=14% Similarity=0.229 Sum_probs=56.5
Q ss_pred EeceeEEEeCCCCeEEEEEeCCeeeeeeEEEeecCCEEEeeeecceeeccceeeecCCCEEEEEEecceEeeeEEEEEcC
Q 009288 92 ASGKGKFSWPSGATYEGGFKSGRMDGEGTFVGVEGDTYRGSWSNDRKHGYGEKRYANGDVYRGSWRFNLMDGYGKYAWSD 171 (538)
Q Consensus 92 ~~G~G~~~~~~G~~YeG~f~~g~~~G~G~~~~~nG~~Y~G~~~~g~~~G~G~~~~~nG~~YeG~w~~g~~~G~G~~~~~n 171 (538)
++|.=++.||+|.+-. .|-+| .-.+.++||.+ +.-...|.-...|+||.+.. -.++|.-+..++|
T Consensus 63 pdG~ev~~FpngQ~E~-h~pDG----~keI~fPDGt~-----k~~~~dG~e~~~fpDGT~~~-----~~~nG~k~i~~pn 127 (179)
T PF07202_consen 63 PDGLEVYEFPNGQIEK-HYPDG----SKEIVFPDGTI-----KYIHPDGREETVFPDGTIVT-----IDPNGDKTITFPN 127 (179)
T ss_pred CCCcEEEEeCCCceEE-EcCCC----CEEEEeCCCcE-----EEEeCCCcEEEECCCceEEE-----EeCCCcEEEEeCC
Confidence 4444455555554322 33333 23455566544 22224444456666665422 2346666777788
Q ss_pred CCEEEEEEeCCeEeeeEEEEecCCCEEEEEEECCeeeeeEEEEeCCCCcccCCcccceE
Q 009288 172 GNVYEGEWKNGVIFGKGTLSWNNGNRYEGCWDNGLPKGKGVFTWSNHENMKNDERDNFE 230 (538)
Q Consensus 172 G~~Y~G~w~~G~~~G~G~~~~~nG~~yeG~w~~G~~~G~G~~~~~dG~~y~~~~kg~~~ 230 (538)
|...+ ... +.-...|+||..-.- + +.|.=...|++|++=-++..|...
T Consensus 128 Gq~ei-~t~-----~~krreyPDGTvk~v-y----~dG~qet~y~~gr~r~kd~~g~~~ 175 (179)
T PF07202_consen 128 GQKEI-HTA-----DFKRREYPDGTVKTV-Y----PDGRQETRYASGRVRIKDKDGNVI 175 (179)
T ss_pred CcEEE-Ecc-----ccEEEEcCCCCEEEE-e----cCCCEEEEeCCCcEEEecCCCCEE
Confidence 76533 111 222456677763321 1 234445667777776555555543
No 25
>PF14977 FAM194: FAM194 protein
Probab=41.78 E-value=1.7e+02 Score=28.80 Aligned_cols=81 Identities=20% Similarity=0.235 Sum_probs=47.7
Q ss_pred eeecCCCEEEEEEecceEeeeEEEEEcCCCEEEEEEeCCeEeeeEEEEecCCC--EEEEEEECCeeeeeEEEEeCCCCcc
Q 009288 144 KRYANGDVYRGSWRFNLMDGYGKYAWSDGNVYEGEWKNGVIFGKGTLSWNNGN--RYEGCWDNGLPKGKGVFTWSNHENM 221 (538)
Q Consensus 144 ~~~~nG~~YeG~w~~g~~~G~G~~~~~nG~~Y~G~w~~G~~~G~G~~~~~nG~--~yeG~w~~G~~~G~G~~~~~dG~~y 221 (538)
..|++|.++.=.| .+|-|..+|++|++=.-.... ...+.-...+.|.. ..-+.|.. +|.|++++++|.+.
T Consensus 9 ~~Y~~g~~f~~~f----~DGsg~i~YPSGnlAi~~~~~-~~~~~~~~v~eD~~~~~ilA~Fd~---~G~g~~y~~~g~~~ 80 (208)
T PF14977_consen 9 KYYKNGRKFHYMF----PDGSGQIFYPSGNLAICISPT-CRGGFTYIVYEDSPENTILALFDS---SGHGTCYHPNGNIW 80 (208)
T ss_pred eeCCCCcEEEEEc----CCCCEEEEeCCCCEEEEEecc-CCCceEEEEEecCCCCceEEEEcC---CCCEEEEcCCCCEE
Confidence 3456666553333 346677777777765555544 44445555555544 45666643 78888988888865
Q ss_pred --cCCcccceEec
Q 009288 222 --KNDERDNFEVM 232 (538)
Q Consensus 222 --~~~~kg~~~~~ 232 (538)
-...-|.+.+.
T Consensus 81 l~l~~~gG~~~D~ 93 (208)
T PF14977_consen 81 LVLNQEGGQYFDQ 93 (208)
T ss_pred EEEECCCCEEEcC
Confidence 23334666554
No 26
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=39.07 E-value=1.2e+02 Score=27.32 Aligned_cols=69 Identities=19% Similarity=0.301 Sum_probs=43.5
Q ss_pred CCCccceEEEee---CCcEEEEecCHHHHHHHHHHHHHHHHHhhcCCCceeEeeEeeEEEEecCCeEEEEEEEeeec
Q 009288 410 PGKSGSFFYLTQ---DDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLF 483 (538)
Q Consensus 410 ~GkSgs~f~~t~---D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~N~f 483 (538)
.|..|+.|.... +.+++||.+.........+.+..-+..+..-.+.-++++++..... ...++||+.+-
T Consensus 3 ~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-----~~~~~~~e~~~ 74 (215)
T cd00180 3 EGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDE-----NHLYLVMEYCE 74 (215)
T ss_pred cCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecC-----CeEEEEEecCC
Confidence 466677777655 4789999999886643333444444444443445667777766543 45688888664
No 27
>smart00653 eIF2B_5 domain present in translation initiation factor eIF2B and eIF5.
Probab=30.41 E-value=2.6e+02 Score=24.65 Aligned_cols=74 Identities=18% Similarity=0.306 Sum_probs=48.6
Q ss_pred HHHHHHHhCCChHHHHHhhcCCcccccccCCCCccceEEEeeCCcEEEEecCHHHHHHHHHHHHHHHHHh-----hcCCC
Q 009288 380 FRHLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYYQHV-----CQYKN 454 (538)
Q Consensus 380 F~~lR~~~~i~~~~y~~Sl~~~~~~~~~~s~GkSgs~f~~t~D~rfiiKti~~~E~~~l~~~lp~Y~~~~-----~~~~~ 454 (538)
|..|-+.++-+++..+.-|. .||..+|+ +..++++||+- +...+.+.+.|..|..-. ..+|+
T Consensus 24 f~~I~~~L~R~p~hv~kyl~-----~ELgt~g~------id~~~rlii~G--~~~~~~i~~~l~~yI~~yVlC~~C~spd 90 (110)
T smart00653 24 FADIAKALNRPPDHVLKFLL-----AELGTQGS------IDGKGRLIVNG--RFTPKKLQDLLRRYIKEYVLCPECGSPD 90 (110)
T ss_pred HHHHHHHHCCCHHHHHHHHH-----HHhCCcee------ECCCCeEEEEE--eeCHHHHHHHHHHHHHhcEECCCCCCCC
Confidence 67777788888877766553 56655554 22337899976 444666777778877663 26799
Q ss_pred ceeEeeEeeEEE
Q 009288 455 TLVTKFFGVHCV 466 (538)
Q Consensus 455 tLL~k~~Gl~~i 466 (538)
|-|.+==+++.+
T Consensus 91 T~l~k~~r~~~l 102 (110)
T smart00653 91 TELIKENRLFFL 102 (110)
T ss_pred cEEEEeCCeEEE
Confidence 998875444433
No 28
>PF10411 DsbC_N: Disulfide bond isomerase protein N-terminus; InterPro: IPR018950 This is the N-terminal domain of the disulphide bond isomerase DsbC. The whole molecule is V-shaped, where each arm is a DsbC monomer of two domains linked by a hinge; and the N-termini of each monomer join to form the dimer interface at the base of the V, so are vital for dimerisation []. DsbC is required for disulphide bond formation and functions as a disulphide bond isomerase during oxidative protein-folding in bacterial periplasm. It also has chaperone activity []. ; PDB: 1EEJ_B 2IYJ_A 1TJD_A 1JZD_B 1JZO_A 1G0T_B 1T3B_A.
Probab=28.37 E-value=44 Score=25.66 Aligned_cols=22 Identities=36% Similarity=0.770 Sum_probs=16.1
Q ss_pred cccccCCCCccceEEEeeCCcEEE
Q 009288 404 LRELSSPGKSGSFFYLTQDDRFMI 427 (538)
Q Consensus 404 ~~~~~s~GkSgs~f~~t~D~rfii 427 (538)
|-|... +.|-.||.|.|++|+|
T Consensus 25 lyeV~~--~~~~i~Y~~~dg~yli 46 (57)
T PF10411_consen 25 LYEVVL--KGGGILYVDEDGRYLI 46 (57)
T ss_dssp EEEEEE---TTEEEEEETTSSEEE
T ss_pred eEEEEE--CCCeEEEEcCCCCEEE
Confidence 444444 3456999999999998
No 29
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=27.23 E-value=2.2e+02 Score=28.15 Aligned_cols=71 Identities=17% Similarity=0.161 Sum_probs=40.1
Q ss_pred CCCCccceEEEee---CCcEEEEecCHHHHHHHHHHHHHHHHHhhcCCCceeEeeEeeEEEEecCCeEEEEEEEeee
Q 009288 409 SPGKSGSFFYLTQ---DDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNL 482 (538)
Q Consensus 409 s~GkSgs~f~~t~---D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~N~ 482 (538)
+.|..|.+|.... +..+++|++..........-+..-.+-+..-.+.-|++++|.|... .....++||+.+
T Consensus 10 g~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~~~~lv~e~~ 83 (287)
T cd06621 10 GEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDE---SSSSIGIAMEYC 83 (287)
T ss_pred ccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEcc---CCCeEEEEEEec
Confidence 4466666655443 5679999988643322222222223334433345588899988543 223457898865
No 30
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=25.89 E-value=2.4e+02 Score=27.53 Aligned_cols=68 Identities=22% Similarity=0.276 Sum_probs=41.4
Q ss_pred CCCccceEEEe---eCCcEEEEecCHHHHHHHHHHHHHHHHHhhcCCCceeEeeEeeEEEEecCCeEEEEEEEeee
Q 009288 410 PGKSGSFFYLT---QDDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNL 482 (538)
Q Consensus 410 ~GkSgs~f~~t---~D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~N~ 482 (538)
.|..|+.|--. ....+.||.+..++.....+.+..-..-+....+.-++++++.+.- ...+++||+.+
T Consensus 14 ~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~~~lv~e~~ 84 (277)
T cd06641 14 KGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-----DTKLWIIMEYL 84 (277)
T ss_pred ecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEe-----CCeEEEEEEeC
Confidence 36667666543 2356899998765544443433333334444445568899998653 24578999865
No 31
>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function. All known members of this group are proteins from drosophila and Caenorhabditis elegans.
Probab=25.76 E-value=1.3e+02 Score=30.26 Aligned_cols=57 Identities=12% Similarity=0.167 Sum_probs=38.3
Q ss_pred cEEEEecC---------------HHHHHHHHHHHHHHHHHhhcC--CCceeEeeEeeEEEEecCCeEEEEEEEeeeccC
Q 009288 424 RFMIKTVK---------------KSEVKVLIRMLPSYYQHVCQY--KNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCS 485 (538)
Q Consensus 424 rfiiKti~---------------~~E~~~l~~~lp~Y~~~~~~~--~~tLL~k~~Gl~~i~~~~~~~~~fvVM~N~f~~ 485 (538)
.+|||++. +.|+.+..+++|.+-...... +..+.|+.|+... ...-.+|||+||=..
T Consensus 28 s~ivK~~p~~~~~~~~~~~~~~f~~E~~fY~~~~p~l~~~~~~~~~~~~~~P~~~~~~~-----~~~~~~lvlEDL~~~ 101 (294)
T PF02958_consen 28 SLIVKSPPTNPSRREFLREMGSFRREIFFYRELLPELEELQKEAGDPFKFFPKCYYADE-----DPGDEVLVLEDLSEK 101 (294)
T ss_pred EEEEEeCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccccceeeceEEEecc-----CCCceeeehhhhhhc
Confidence 47788876 246777777888887777544 4566777776541 112469999999643
No 32
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=25.52 E-value=2.2e+02 Score=27.31 Aligned_cols=68 Identities=10% Similarity=0.095 Sum_probs=39.8
Q ss_pred CCCCccceEEEee---CC---cEEEEecCHHHHHHHHHHHHHHHHHhhcCCCceeEeeEeeEEEEecCCeEEEEEEEeee
Q 009288 409 SPGKSGSFFYLTQ---DD---RFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNL 482 (538)
Q Consensus 409 s~GkSgs~f~~t~---D~---rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~N~ 482 (538)
+.|..|..|-... .+ .+.||.++........+-++.-..-+..-.+.-++++++.+.- ...++||+.+
T Consensus 4 g~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~~~~~v~e~~ 77 (257)
T cd05040 4 GDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT------HPLMMVTELA 77 (257)
T ss_pred CccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC------CeEEEEEEec
Confidence 3456666664432 22 4889999987774333333333334443344457888887542 4568899865
No 33
>PF07661 MORN_2: MORN repeat variant; InterPro: IPR011652 This entry represents an apparent variant of the IPR003409 from INTERPRO repeat.
Probab=24.73 E-value=1.2e+02 Score=17.75 Aligned_cols=11 Identities=27% Similarity=0.613 Sum_probs=4.7
Q ss_pred eeEEEEecCCC
Q 009288 186 GKGTLSWNNGN 196 (538)
Q Consensus 186 G~G~~~~~nG~ 196 (538)
|.-+.+++||.
T Consensus 3 G~~~~yy~nG~ 13 (22)
T PF07661_consen 3 GEWKFYYENGK 13 (22)
T ss_pred ceEEEEeCCCC
Confidence 33344444444
No 34
>PF14977 FAM194: FAM194 protein
Probab=22.79 E-value=2.5e+02 Score=27.67 Aligned_cols=14 Identities=36% Similarity=0.643 Sum_probs=7.5
Q ss_pred ceeEEEeCCCCeEE
Q 009288 94 GKGKFSWPSGATYE 107 (538)
Q Consensus 94 G~G~~~~~~G~~Ye 107 (538)
|-|.++||+|.+-.
T Consensus 24 Gsg~i~YPSGnlAi 37 (208)
T PF14977_consen 24 GSGQIFYPSGNLAI 37 (208)
T ss_pred CCEEEEeCCCCEEE
Confidence 45555566665533
Done!