Query 009288
Match_columns 538
No_of_seqs 530 out of 2387
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 23:06:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009288.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009288hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ybx_A Phosphatidylinositol-5- 100.0 1.1E-55 3.7E-60 464.1 18.6 225 303-537 12-245 (394)
2 2gk9_A Phosphatidylinositol-4- 100.0 2.8E-54 9.7E-59 453.5 14.4 220 305-537 6-234 (392)
3 1h3i_A Histone H3 lysine 4 spe 99.9 4.5E-27 1.5E-31 239.4 15.3 131 77-207 2-139 (293)
4 1h3i_A Histone H3 lysine 4 spe 99.9 6.7E-27 2.3E-31 238.2 16.5 133 53-185 1-140 (293)
5 2f69_A Histone-lysine N-methyl 98.9 1.1E-09 3.8E-14 109.2 5.0 55 154-208 3-60 (261)
6 2f69_A Histone-lysine N-methyl 98.9 1.4E-09 4.7E-14 108.6 5.4 56 130-185 2-60 (261)
7 2aqx_A Predicted: inositol 1,4 83.4 2.4 8.3E-05 42.3 7.5 74 408-496 19-92 (289)
8 1w2f_A Inositol-trisphosphate 78.8 3.4 0.00012 41.0 6.7 72 411-496 8-79 (276)
9 2a98_A Inositol 1,4,5-trisphos 77.2 3 0.0001 40.9 5.8 62 422-496 1-62 (259)
10 2iew_A Inositol polyphosphate 76.8 2.7 9.1E-05 43.4 5.5 84 410-496 15-133 (363)
11 3ts3_A Capsid polyprotein; vir 63.9 2.2 7.6E-05 38.8 1.2 39 382-428 130-168 (208)
12 3iot_A Maltose-binding protein 52.7 2.4 8.2E-05 44.1 -0.7 8 50-57 431-438 (449)
13 3hmm_A TGF-beta receptor type- 50.6 30 0.001 34.0 7.1 76 404-482 7-83 (303)
14 3q4u_A Activin receptor type-1 48.6 48 0.0016 31.3 8.1 74 406-482 14-88 (301)
15 3g2f_A Bone morphogenetic prot 48.5 29 0.001 33.6 6.7 73 408-482 21-94 (336)
16 3gxj_A TGF-beta receptor type- 42.3 38 0.0013 32.0 6.3 73 407-482 10-83 (303)
17 3ll6_A Cyclin G-associated kin 36.1 56 0.0019 31.3 6.4 73 408-482 36-116 (337)
18 4frf_A Inositol polyphosphate 31.6 11 0.00036 37.2 0.2 78 409-496 5-89 (275)
19 1b6c_B TGF-B superfamily recep 30.8 43 0.0015 32.4 4.6 74 407-483 49-123 (342)
20 3soc_A Activin receptor type-2 29.4 1.2E+02 0.0042 29.1 7.7 72 408-482 32-104 (322)
21 3op5_A Serine/threonine-protei 27.7 2.1E+02 0.0071 28.0 9.1 75 407-482 42-134 (364)
22 2buj_A Serine/threonine-protei 24.9 1.5E+02 0.0052 28.0 7.3 72 408-483 37-113 (317)
23 1nxk_A MAP kinase-activated pr 24.5 1.9E+02 0.0064 29.1 8.2 68 409-482 71-141 (400)
24 4e5w_A Tyrosine-protein kinase 23.7 87 0.003 29.5 5.2 71 409-482 30-107 (302)
25 2v62_A Serine/threonine-protei 23.5 2.3E+02 0.0078 27.4 8.5 75 407-482 44-134 (345)
26 2eqj_A Metal-response element- 23.2 49 0.0017 25.4 2.5 39 74-112 21-60 (66)
27 2i6l_A Mitogen-activated prote 21.9 1.3E+02 0.0046 28.2 6.2 74 407-482 18-104 (320)
28 2jii_A Serine/threonine-protei 21.5 87 0.003 30.6 4.8 71 408-482 50-140 (352)
29 2b9h_A MAP kinase FUS3, mitoge 21.2 50 0.0017 32.2 2.9 75 405-482 16-96 (353)
30 2dyl_A Dual specificity mitoge 20.5 1.8E+02 0.0062 27.4 6.8 70 408-482 33-106 (318)
31 1blx_A Cyclin-dependent kinase 20.1 2.4E+02 0.0081 26.7 7.6 66 408-483 19-102 (326)
No 1
>2ybx_A Phosphatidylinositol-5-phosphate 4-kinase type-2; transferase, signalling; HET: PHD; 2.56A {Homo sapiens} PDB: 1bo1_A
Probab=100.00 E-value=1.1e-55 Score=464.11 Aligned_cols=225 Identities=30% Similarity=0.449 Sum_probs=193.7
Q ss_pred CCCcEEecCCCcHHHHHHHHHHHHhhhcCC--CcccccCCcccCCCceeeEee---CCCCCCCCCCCCccCCeEEEEcCH
Q 009288 303 KPGHTISKGHKNYDLMLNLQLGIRHSVGKH--ASVMRELRQSDFEPKEKFWTR---FPPEGSKFTPPHQSMDFRWKDYCP 377 (538)
Q Consensus 303 ~~g~~i~~gh~~~~l~~~~~~Gi~~~i~~~--~~~~~~l~~~df~~~~k~~~~---f~~~~~~~~~~~~~~~f~~k~y~P 377 (538)
-.|++++..+.++.||.+||||||+||+++ .+++.+|+++||++++|+++. |+++ .+| .+|+|++|||
T Consensus 12 ~~~~~~~~~r~~~~l~~~~~~Gi~~~v~~~~~~~~~~~L~~~df~~~~k~~~~~~~f~~~---~~p----~~f~~k~Y~P 84 (394)
T 2ybx_A 12 DLGTENLYFQSMDPLLSVLMWGVNHSINELSHVQIPVMLMPDDFKAYSKIKVDNHLFNKE---NMP----SHFKFKEYCP 84 (394)
T ss_dssp -----CCCCCCSSHHHHHHHHHHHHHHHHHTTSCCCSSCCGGGGGCEEEEEEEEESSSTT---TSC----SEEEEEEESH
T ss_pred CCCCcccccccchHHHHHHHHhHHHHHhhccCCCCccccChhHhhhheEEecccccCCcc---cCC----CCeEEEEECH
Confidence 457888999999999999999999999998 445667899999999999874 6655 344 4799999999
Q ss_pred HHHHHHHHHhCCChHHHHHhhcCCcccccccCCCCccceEEEeeCCcEEEEecCHHHHHHHHHHHHHHHHHhh-cCCCce
Q 009288 378 MVFRHLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYYQHVC-QYKNTL 456 (538)
Q Consensus 378 ~~F~~lR~~~~i~~~~y~~Sl~~~~~~~~~~s~GkSgs~f~~t~D~rfiiKti~~~E~~~l~~~lp~Y~~~~~-~~~~tL 456 (538)
.+|++||++|||++++|+.|||++.++. +.|+|||||+||+|.|+|||||||+++|+++|+++||.||+||. +||+||
T Consensus 85 ~~F~~LR~~~~i~~~dy~~Sl~~~~~~~-~~s~GKSGs~F~~T~D~rfiIKti~~~E~~~l~~~lp~Y~~~~~~~~~~TL 163 (394)
T 2ybx_A 85 MVFRNLRERFGIDDQDFQNSLTRSAPLP-NDSQARSGARFHTSYDKRYIIKTITSEDVAEMHNILKKYHQYIVECHGITL 163 (394)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHSSCCEE-CC-----CCCEEECTTSSEEEEEECHHHHHHHHHHHHHHHHHHHHTTTCCS
T ss_pred HHHHHHHHHhCCCHHHHHHHhcCCCccc-cCCCCCccCEEEEeCCCcEEEEeeCHHHHHHHHHHHHHHHHHHHhcCCCcC
Confidence 9999999999999999999999887754 78999999999999999999999999999999999999999995 699999
Q ss_pred eEeeEeeEEEEecCCeEEEEEEEeeeccCCCceeeEEEeeccCcCCccCCCccccCCCCcEeeCCC---cccccCCHHHH
Q 009288 457 VTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIHRRFDLKGSSYGRITDKPEEEIDETTTLKDLDL---DFVFRLDRSWF 533 (538)
Q Consensus 457 L~k~~Gl~~i~~~~~~~~~fvVM~N~f~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lKD~d~---~~~~~~~~~~~ 533 (538)
|+||||||+|++. ++++|||||+|||++...||++||||||+++|.+++++ ..+..+||||+|| ...+++.+.++
T Consensus 164 L~k~~Gly~v~~~-~~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~-~~~~~~~LkD~df~~~~~~i~l~~~~k 241 (394)
T 2ybx_A 164 LPQFLGMYRLNVD-GVEIYVIVTRNVFSHRLSVYRKYDLKGSTVAREASDKE-KAKELPTLKDNDFINEGQKIYIDDNNK 241 (394)
T ss_dssp SCCEEEEEEEEET-TEEEEEEEEECSSCSSSCCSEEEEECCSSSCCCCCHHH-HTSSSCEECHHHHHHTTCCCCCCHHHH
T ss_pred hhhhcEEEEEEEC-CeEEEEEEEecCCCCCcceeeeeeecccccCCccCccc-cccCcceecccchHhcCCeEEECHHHH
Confidence 9999999999975 58999999999999988999999999999999997643 3456789999999 45799999998
Q ss_pred HHHh
Q 009288 534 QELI 537 (538)
Q Consensus 534 ~~~~ 537 (538)
+.|+
T Consensus 242 ~~l~ 245 (394)
T 2ybx_A 242 KVFL 245 (394)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8886
No 2
>2gk9_A Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma; phosphoinositide, structural genomics, structural genomics consortium, SGC, transferase; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.8e-54 Score=453.46 Aligned_cols=220 Identities=28% Similarity=0.468 Sum_probs=165.9
Q ss_pred CcEEecCCCcHHHHHHHHHHHHhhhcCC--CcccccCCcccCCCceeeEee---CCCCCCCCCCCCccCCeEEEEcCHHH
Q 009288 305 GHTISKGHKNYDLMLNLQLGIRHSVGKH--ASVMRELRQSDFEPKEKFWTR---FPPEGSKFTPPHQSMDFRWKDYCPMV 379 (538)
Q Consensus 305 g~~i~~gh~~~~l~~~~~~Gi~~~i~~~--~~~~~~l~~~df~~~~k~~~~---f~~~~~~~~~~~~~~~f~~k~y~P~~ 379 (538)
++.+...+.+..||.+||||||+||+++ .+++.+|+++||++++|+++. |+++ .+| .+|+|++|||.+
T Consensus 6 ~~~~~~~r~~~~~~~~~~~Gi~~~v~~~~~~~~~~~L~~~df~~~~k~~~~~~~f~~e---~~p----~~f~~k~Y~P~~ 78 (392)
T 2gk9_A 6 QQKVKVFRAADPLVGVFLWGVAHSINELSQVPPPVMLLPDDFKASSKIKVNNHLFHRE---NLP----SHFKFKEYCPQV 78 (392)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHTTSCCCSSCCGGGGGCEEEEEEECSSSCCS---SSC----SSBEEEEESHHH
T ss_pred eeeeeecCcchHHHHHHHHhHHHHhhcccCCCCccccChhHhhhheEEeeccccCCcc---cCC----CceEEEEECHHH
Confidence 4455555666999999999999999988 345566999999999999874 5554 344 579999999999
Q ss_pred HHHHHHHhCCChHHHHHhhcCCcccccccCCCCccceEEEeeCCcEEEEecCHHHHHHHHHHHHHHHHHh-hcCCCceeE
Q 009288 380 FRHLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYYQHV-CQYKNTLVT 458 (538)
Q Consensus 380 F~~lR~~~~i~~~~y~~Sl~~~~~~~~~~s~GkSgs~f~~t~D~rfiiKti~~~E~~~l~~~lp~Y~~~~-~~~~~tLL~ 458 (538)
|++||++|||++++|+.|||++.+|. |+|||| +||+|.|+|||||||+++|+++|+++||.||+|| .+||+|||+
T Consensus 79 F~~LR~~~~i~~~dy~~Sl~~~~~~~---s~GKSG-~F~~T~D~rfiIKti~~~E~~~l~~~lp~Y~~~~~~~~~~TLL~ 154 (392)
T 2gk9_A 79 FRNLRDRFGIDDQDYLVSLTRNPPSE---SEGSDG-RFLISYDRTLVIKEVSSEDIADMHSNLSNYHQYIVKCHGNTLLP 154 (392)
T ss_dssp HHHHHHTTTCCHHHHHHHHHSSCCCC---CC------CCCCTTSSEEEEECCHHHHHHHHHHHHHHHHHHHHTTSCSSSC
T ss_pred HHHHHHHhCCCHHHHHHHhcCCCccc---CCCCcc-eEEEcCCCcEEEEeeCHHHHHHHHHHHHHHHHHHHhhCCCcchh
Confidence 99999999999999999999888766 899999 9999999999999999999999999999999999 469999999
Q ss_pred eeEeeEEEEecCCeEEEEEEEeeeccCCCceeeEEEeeccCcCCccCCCccccCCCCcEeeCCC---cccccCCHHHHHH
Q 009288 459 KFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIHRRFDLKGSSYGRITDKPEEEIDETTTLKDLDL---DFVFRLDRSWFQE 535 (538)
Q Consensus 459 k~~Gl~~i~~~~~~~~~fvVM~N~f~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lKD~d~---~~~~~~~~~~~~~ 535 (538)
||||||+|++. ++++|||||+|||++...||++||||||+++|.+++++ ..++.+||||+|| ...+++.+.+++.
T Consensus 155 k~~Gly~v~~~-~~~~~~vVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~-~~~~~~~LkD~df~~~~~~i~l~~~~k~~ 232 (392)
T 2gk9_A 155 QFLGMYRVSVD-NEDSYMLVMRNMFSHRLPVHRKYDLKGSLVSREASDKE-KVKELPTLRDMDFLNKNQKVYIGEEEKKI 232 (392)
T ss_dssp CEEEEEECCBS-SCCCEEEEEECSSCSSSCCSCCCEECC------------------CCBTTC--CCCCCCCC----CHH
T ss_pred hhceEEEEEEC-CeEEEEEEEecCCCCCcceeeeeeecccccCCccCccc-cccccceecccchhhcCCeEEECHHHHHH
Confidence 99999999975 47899999999999988999999999999999997754 3356789999999 4568898888777
Q ss_pred Hh
Q 009288 536 LI 537 (538)
Q Consensus 536 ~~ 537 (538)
|+
T Consensus 233 l~ 234 (392)
T 2gk9_A 233 FL 234 (392)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 3
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=99.94 E-value=4.5e-27 Score=239.45 Aligned_cols=131 Identities=19% Similarity=0.367 Sum_probs=84.5
Q ss_pred EcCCcEEEEEEECCeEeceeEEEeCCCCeEEEEEeCCeeeeeeEEEeecCC-EEEeeeecceeeccceeeecCCCEEEEE
Q 009288 77 WSDRCMYEGEWRKGRASGKGKFSWPSGATYEGGFKSGRMDGEGTFVGVEGD-TYRGSWSNDRKHGYGEKRYANGDVYRGS 155 (538)
Q Consensus 77 ~~dG~~YeG~w~~G~~~G~G~~~~~~G~~YeG~f~~g~~~G~G~~~~~nG~-~Y~G~~~~g~~~G~G~~~~~nG~~YeG~ 155 (538)
|+||.+|+|+|++|++||.|+++|++|.+|+|+|++|++||.|+++++||. +|+|+|++|++||.|+++++||.+|+|+
T Consensus 2 ~~~G~~Y~G~~~~g~~~G~G~~~~~~G~~Y~G~~~~g~~~G~G~~~~~~G~~~y~G~~~~g~~~G~G~~~~~~G~~y~G~ 81 (293)
T 1h3i_A 2 FFDGSTLEGYYVDDALQGQGVYTYEDGGVLQGTYVDGELNGPAQEYDTDGRLIFKGQYKDNIRHGVCWIYYPDGGSLVGE 81 (293)
T ss_dssp CSSSCCCCEEEETTEEEEEEEEECTTSCEEEEEEETTEEEEEEEEECSSSCEEEEEEEETTEECSEEEEECTTSCEEEEE
T ss_pred cCCCCEEEEEEECCEeeEEEEEEECCCCEEEEEEECCEEEeCEEEEECCCCEEEEEEEECCEEEeeEEEEECCCCEEEEE
Confidence 455555555555555555555555555555555555555555555556666 5666666666666666666666677777
Q ss_pred Ee-cceEeee-EEEEEcCCC-EEEEEEeCCeEe-eeEEEE--ecCCCEEEEEEECCee
Q 009288 156 WR-FNLMDGY-GKYAWSDGN-VYEGEWKNGVIF-GKGTLS--WNNGNRYEGCWDNGLP 207 (538)
Q Consensus 156 w~-~g~~~G~-G~~~~~nG~-~Y~G~w~~G~~~-G~G~~~--~~nG~~yeG~w~~G~~ 207 (538)
|+ +|++||. |+++++||. .|+|+|++|+++ |.|+++ ++||..+.|.|.+|..
T Consensus 82 ~~~~g~~~G~gG~~~~~~G~~~y~G~~~~g~~~~G~~~~~~~~~~g~~~~g~w~~g~~ 139 (293)
T 1h3i_A 82 VNEDGEMTGEKIAYVYPDERTALYGKFIDGEMIEGKLATLMSTEEGRPHFELMPGNSV 139 (293)
T ss_dssp CCTTSCSCEEEEEEECTTSSEEEEEEEETTEEEEEEEEEEEECTTTSCEEEECSSCCE
T ss_pred EeECCeEeCCeEEEEECCCCEEEEEEEECCEEEccceEEEEecCCcceEEeEEcCCce
Confidence 77 7777777 777777777 477777777777 777766 6677777777755443
No 4
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=99.94 E-value=6.7e-27 Score=238.18 Aligned_cols=133 Identities=17% Similarity=0.219 Sum_probs=128.4
Q ss_pred EcCCCCEEEEEEECCEEeeeEEEEEcCCcEEEEEEECCeEeceeEEEeCCCC-eEEEEEeCCeeeeeeEEEeecCCEEEe
Q 009288 53 ILPNGDLYTGAVSGNAPHGVGKYVWSDRCMYEGEWRKGRASGKGKFSWPSGA-TYEGGFKSGRMDGEGTFVGVEGDTYRG 131 (538)
Q Consensus 53 ~~~nG~~Y~G~~~~g~~~G~G~~~~~dG~~YeG~w~~G~~~G~G~~~~~~G~-~YeG~f~~g~~~G~G~~~~~nG~~Y~G 131 (538)
+|+||++|+|+|+++++||.|+++|+||.+|+|+|++|++||.|+++|++|. +|+|+|++|++||.|+++++||.+|+|
T Consensus 1 ~~~~G~~Y~G~~~~g~~~G~G~~~~~~G~~Y~G~~~~g~~~G~G~~~~~~G~~~y~G~~~~g~~~G~G~~~~~~G~~y~G 80 (293)
T 1h3i_A 1 FFFDGSTLEGYYVDDALQGQGVYTYEDGGVLQGTYVDGELNGPAQEYDTDGRLIFKGQYKDNIRHGVCWIYYPDGGSLVG 80 (293)
T ss_dssp CCSSSCCCCEEEETTEEEEEEEEECTTSCEEEEEEETTEEEEEEEEECSSSCEEEEEEEETTEECSEEEEECTTSCEEEE
T ss_pred CcCCCCEEEEEEECCEeeEEEEEEECCCCEEEEEEECCEEEeCEEEEECCCCEEEEEEEECCEEEeeEEEEECCCCEEEE
Confidence 4789999999999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred eee-cceeecc-ceeeecCCC-EEEEEEecceEe-eeEEEE--EcCCCEEEEEEeCCeEe
Q 009288 132 SWS-NDRKHGY-GEKRYANGD-VYRGSWRFNLMD-GYGKYA--WSDGNVYEGEWKNGVIF 185 (538)
Q Consensus 132 ~~~-~g~~~G~-G~~~~~nG~-~YeG~w~~g~~~-G~G~~~--~~nG~~Y~G~w~~G~~~ 185 (538)
+|+ +|++||. |+++++||. .|+|.|++|+++ |.|+++ +++|..+.|.|.+++.-
T Consensus 81 ~~~~~g~~~G~gG~~~~~~G~~~y~G~~~~g~~~~G~~~~~~~~~~g~~~~g~w~~g~~~ 140 (293)
T 1h3i_A 81 EVNEDGEMTGEKIAYVYPDERTALYGKFIDGEMIEGKLATLMSTEEGRPHFELMPGNSVY 140 (293)
T ss_dssp ECCTTSCSCEEEEEEECTTSSEEEEEEEETTEEEEEEEEEEEECTTTSCEEEECSSCCEE
T ss_pred EEeECCeEeCCeEEEEECCCCEEEEEEEECCEEEccceEEEEecCCcceEEeEEcCCceE
Confidence 999 9999999 999999999 699999999999 999998 89999999999877763
No 5
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=98.87 E-value=1.1e-09 Score=109.23 Aligned_cols=55 Identities=18% Similarity=0.247 Sum_probs=29.4
Q ss_pred EEEecceEeeeEEEEEcCCCEEEEEEe-CCeEeee-EEEEecCCCE-EEEEEECCeee
Q 009288 154 GSWRFNLMDGYGKYAWSDGNVYEGEWK-NGVIFGK-GTLSWNNGNR-YEGCWDNGLPK 208 (538)
Q Consensus 154 G~w~~g~~~G~G~~~~~nG~~Y~G~w~-~G~~~G~-G~~~~~nG~~-yeG~w~~G~~~ 208 (538)
|+|++|++||.|+++++||.+|+|+|. +|.+||. |+++|+||.. |+|.|.+|.+.
T Consensus 3 g~~~~~~~~G~g~~~~~dG~~y~G~~~~~~~~~G~~g~y~y~d~~~~~~G~~~~g~~~ 60 (261)
T 2f69_A 3 MGYKDNIRHGVCWIYYPDGGSLVGEVNEDGEMTGEKIAYVYPDERTALYGKFIDGEMI 60 (261)
T ss_dssp --------CCCEEEECTTSCEEEECCCTTSCCCEEEEEEECTTSSEEEEEEEETTEEE
T ss_pred ceecCCceecceEEEeCCCCEEEEEEeeCCcCccceEEEEeCCCCEEEEEEEeCCcEe
Confidence 556666666666666666666666666 6666666 6666666665 66666666553
No 6
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=98.86 E-value=1.4e-09 Score=108.57 Aligned_cols=56 Identities=20% Similarity=0.329 Sum_probs=44.4
Q ss_pred EeeeecceeeccceeeecCCCEEEEEEe-cceEeee-EEEEEcCCCE-EEEEEeCCeEe
Q 009288 130 RGSWSNDRKHGYGEKRYANGDVYRGSWR-FNLMDGY-GKYAWSDGNV-YEGEWKNGVIF 185 (538)
Q Consensus 130 ~G~~~~g~~~G~G~~~~~nG~~YeG~w~-~g~~~G~-G~~~~~nG~~-Y~G~w~~G~~~ 185 (538)
.|+|++|++||.|+++|+||++|+|+|. +|.++|. |+|+|+||.+ |+|+|++|.+.
T Consensus 2 ~g~~~~~~~~G~g~~~~~dG~~y~G~~~~~~~~~G~~g~y~y~d~~~~~~G~~~~g~~~ 60 (261)
T 2f69_A 2 AMGYKDNIRHGVCWIYYPDGGSLVGEVNEDGEMTGEKIAYVYPDERTALYGKFIDGEMI 60 (261)
T ss_dssp ---------CCCEEEECTTSCEEEECCCTTSCCCEEEEEEECTTSSEEEEEEEETTEEE
T ss_pred CceecCCceecceEEEeCCCCEEEEEEeeCCcCccceEEEEeCCCCEEEEEEEeCCcEe
Confidence 3889999999999999999999999999 9999999 9999999998 99999998885
No 7
>2aqx_A Predicted: inositol 1,4,5-trisphosphate 3-kinase; IP3K, ITPKB, IP3-3K, IP3-3KB, IP3, calmodu binding, transferase; HET: ATP; 2.50A {Mus musculus}
Probab=83.44 E-value=2.4 Score=42.30 Aligned_cols=74 Identities=22% Similarity=0.317 Sum_probs=51.7
Q ss_pred cCCCCccceEEEeeCCcEEEEecCHHHHHHHHHHHHHHHHHhhcCCCceeEeeEeeEEEEecCCeEEEEEEEeeeccCCC
Q 009288 408 SSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEY 487 (538)
Q Consensus 408 ~s~GkSgs~f~~t~D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~N~f~~~~ 487 (538)
.-.|-+|+ +...++..|+|-.+..|.++...+.+. .-..++|+|+|+..+. + ..||||+||...-
T Consensus 19 QvaGH~g~--~~~~~~G~i~Kp~~~~E~~fYe~l~~~-------~L~~fvP~y~G~~~~~---~--~~~i~LEDLt~gf- 83 (289)
T 2aqx_A 19 QLAGHAGS--FKAAANGRILKKHCESEQRCLDRLMAD-------VLRPFVPAYHGDVVKD---G--ERYNQMDDLLADF- 83 (289)
T ss_dssp CCSSCTTS--EEECSTTEEEEECCHHHHHHHHHHTTS-------TTGGGSCCEEEEEEET---T--EEEEEEECTTTTC-
T ss_pred EeeCCCCc--ceECCCCEEEeeCcHHHHHHHHHHhhh-------hhHHhCchheEeeccC---C--ceEEEehhhhcCC-
Confidence 34566776 334455568999999999998887643 2247899999986642 2 3699999997532
Q ss_pred ceeeEEEee
Q 009288 488 RIHRRFDLK 496 (538)
Q Consensus 488 ~i~~~yDLK 496 (538)
.--.+=|||
T Consensus 84 ~~PcVmDiK 92 (289)
T 2aqx_A 84 DSPCVMDCK 92 (289)
T ss_dssp SSCEEEEEE
T ss_pred CCceEEEEe
Confidence 223577888
No 8
>1w2f_A Inositol-trisphosphate 3-kinase A; inositol phosphate kinase, transferase, calmodulin-binding; 1.8A {Homo sapiens} SCOP: d.143.1.3 PDB: 1tzd_A* 1w2d_A* 1w2c_A*
Probab=78.83 E-value=3.4 Score=40.98 Aligned_cols=72 Identities=22% Similarity=0.317 Sum_probs=49.6
Q ss_pred CCccceEEEeeCCcEEEEecCHHHHHHHHHHHHHHHHHhhcCCCceeEeeEeeEEEEecCCeEEEEEEEeeeccCCCcee
Q 009288 411 GKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIH 490 (538)
Q Consensus 411 GkSgs~f~~t~D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~N~f~~~~~i~ 490 (538)
|-.|.+... .|+..|+|-++..|..+...+.++ .| ..++|+|+|+..+ ++ ..||||+||...- .--
T Consensus 8 GH~g~l~~~-~~~g~i~Kp~~~~E~~fY~~l~~~---~L----~~fvP~y~G~~~~---~~--~~~i~LEdLt~gf-~~P 73 (276)
T 1w2f_A 8 GHTGSFKAA-GTSGLILKRCSEPERYCLARLMAD---AL----RGCVPAFHGVVER---DG--ESYLQLQDLLDGF-DGP 73 (276)
T ss_dssp TCCSCCEEC-SSTTEEEEECCHHHHHHHHHHHTS---GG----GGGSCCEEEEEEE---TT--EEEEEEECTTTTC-SSC
T ss_pred CCCCceeec-CCCCEEEeeCCHHHHHHHHHhhhh---hH----HHhChhhheeecc---CC--ceEEEechHhcCC-CCc
Confidence 445543322 267789999999999999887643 22 3678999998554 22 3799999997532 223
Q ss_pred eEEEee
Q 009288 491 RRFDLK 496 (538)
Q Consensus 491 ~~yDLK 496 (538)
.+=|||
T Consensus 74 cVmDiK 79 (276)
T 1w2f_A 74 CVLDCK 79 (276)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 477888
No 9
>2a98_A Inositol 1,4,5-trisphosphate 3-kinase C; structural genomics, structural genomics consortium, SGC, transferase; HET: I3P; 2.60A {Homo sapiens}
Probab=77.25 E-value=3 Score=40.91 Aligned_cols=62 Identities=19% Similarity=0.294 Sum_probs=45.5
Q ss_pred CCcEEEEecCHHHHHHHHHHHHHHHHHhhcCCCceeEeeEeeEEEEecCCeEEEEEEEeeeccCCCceeeEEEee
Q 009288 422 DDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRIHRRFDLK 496 (538)
Q Consensus 422 D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~N~f~~~~~i~~~yDLK 496 (538)
|+..|+|-.+..|..+...+.+. .-..++|+|+|+... ++ ..||||+||...- .---+=|||
T Consensus 1 ~~g~i~K~~~~~E~~fY~~l~~~-------~L~~fvP~y~G~~~~---~~--~~~i~LEdLt~g~-~~PcVmDiK 62 (259)
T 2a98_A 1 EDGRILKRFCQCEQRSLEQLMKD-------PLRPFVPAYYGMVLQ---DG--QTFNQMEDLLADF-EGPSIMDCK 62 (259)
T ss_dssp CCSEEEEECCHHHHHHHHHHTTS-------TTGGGSCCEEEEEEE---TT--EEEEEEECTTTTC-SSCEEEEEE
T ss_pred CCCEEeccCCHHHHHHHHHhhhh-------hHHHhCcCceEEEEE---CC--ceEEEeehHhcCC-CCceEEEEE
Confidence 45689999999999999887642 234689999998653 22 3799999997532 223477888
No 10
>2iew_A Inositol polyphosphate multikinase; ATP-grAsp fold related, transferase; 2.00A {Saccharomyces cerevisiae} PDB: 2if8_A*
Probab=76.82 E-value=2.7 Score=43.36 Aligned_cols=84 Identities=14% Similarity=0.163 Sum_probs=46.2
Q ss_pred CCCccceEEEeeCCcEEEEecCHHHHHHHHHHHHHHH------HHhhcCCCceeEeeEeeEEEEecC-------------
Q 009288 410 PGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYY------QHVCQYKNTLVTKFFGVHCVKPVG------------- 470 (538)
Q Consensus 410 ~GkSgs~f~~t~D~rfiiKti~~~E~~~l~~~lp~Y~------~~~~~~~~tLL~k~~Gl~~i~~~~------------- 470 (538)
.|-.| ++...|+.+|+|-++..|+.+...+...=+ ..+..--..++|+|+|+..+....
T Consensus 15 aGH~g--~l~~~dg~~i~Kp~~~~E~~FYe~l~~~~~~~~~~~~~~~~~L~~fvP~y~G~~~~~~~~~~~~~~~~~~~~~ 92 (363)
T 2iew_A 15 AGHDG--TLTDGDGLLIFKPAFPQELEFYKAIQVRDVSRRKSSADGDAPLCSWMPTYLGVLNEGAKIEQSGDAALLKIDE 92 (363)
T ss_dssp -------------CCEEEEECCHHHHHHHHHHC------------CCCCGGGGSCCEEEEEEC-----------------
T ss_pred cCCcc--eeEcCCCCEEeCcCChHHHHHHHHHhhhcccccccccccchhHHhhCcccceeEecccccccccchhhccccc
Confidence 35555 344568999999999999999887653200 000111247899999998875311
Q ss_pred ---------------Ce-EEEEEEEeeeccCCCceeeEEEee
Q 009288 471 ---------------GQ-KTRFIVMGNLFCSEYRIHRRFDLK 496 (538)
Q Consensus 471 ---------------~~-~~~fvVM~N~f~~~~~i~~~yDLK 496 (538)
+. ...||||+||-..- .--.+=|||
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~i~LEdLt~gf-~~PcVlDiK 133 (363)
T 2iew_A 93 RLSDSTDNLDSIPVKSEKSKQYLVLENLLYGF-SKPNILDIK 133 (363)
T ss_dssp ------------------CCEEEEEECTTTTC-SSEEEEEEE
T ss_pred ccccCccchhcccccCCCCccEEEechhhcCC-CCceEEEEE
Confidence 00 34799999997532 334577888
No 11
>3ts3_A Capsid polyprotein; virus protein, projection domain, astrovirus capsid, viral P; 1.49A {Turkey astrovirus 2}
Probab=63.93 E-value=2.2 Score=38.75 Aligned_cols=39 Identities=18% Similarity=0.560 Sum_probs=30.1
Q ss_pred HHHHHhCCChHHHHHhhcCCcccccccCCCCccceEEEeeCCcEEEE
Q 009288 382 HLRELFAIDPADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIK 428 (538)
Q Consensus 382 ~lR~~~~i~~~~y~~Sl~~~~~~~~~~s~GkSgs~f~~t~D~rfiiK 428 (538)
.|..+.++.+-|=+.|+. .+.|+-+++||.|.|+||||=
T Consensus 130 ~lk~r~nl~egDpvismg--------dt~Grraalfyrtsder~ill 168 (208)
T 3ts3_A 130 QLKQRLNLAEGDPVISMG--------DTNGRRAALFYRTSDEKYILF 168 (208)
T ss_dssp HHHHHHCCCTTCEEEEEE--------ETTCCEEEEEEETTTTEEEEE
T ss_pred hhhhhhccccCCceeeec--------ccCCceeeeeeeccCceEEEE
Confidence 477777777766555554 356999999999999999985
No 12
>3iot_A Maltose-binding protein, huntingtin fusion protei; HTT-EX1, HD, sugar transport, transport, apoptos disease mutation, nucleus; 3.50A {Escherichia coli k-12} PDB: 3io6_A 3io4_A 3ior_A 3iou_A 3iov_A 3iow_A
Probab=52.75 E-value=2.4 Score=44.13 Aligned_cols=8 Identities=13% Similarity=0.165 Sum_probs=0.0
Q ss_pred EEEEcCCC
Q 009288 50 VEKILPNG 57 (538)
Q Consensus 50 ~~~~~~nG 57 (538)
.....++|
T Consensus 431 ~~~~~~~~ 438 (449)
T 3iot_A 431 QSYQITAG 438 (449)
T ss_dssp --------
T ss_pred CCcccCCC
Confidence 33344444
No 13
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=50.65 E-value=30 Score=33.95 Aligned_cols=76 Identities=16% Similarity=0.179 Sum_probs=45.5
Q ss_pred cccccCCCCccceEEEeeCCc-EEEEecCHHHHHHHHHHHHHHHHHhhcCCCceeEeeEeeEEEEecCCeEEEEEEEeee
Q 009288 404 LRELSSPGKSGSFFYLTQDDR-FMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNL 482 (538)
Q Consensus 404 ~~~~~s~GkSgs~f~~t~D~r-fiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~N~ 482 (538)
|.+....|..|..|--..+++ +-||.++..+.+.+..-..-...-..+||| +++++|++.-. .......+|||+-+
T Consensus 7 L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpN--Iv~l~g~~~~~-~~~~~~~~lV~Ey~ 83 (303)
T 3hmm_A 7 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHEN--ILGFIAADNKD-NGTWTQLWLVSDYH 83 (303)
T ss_dssp EEEEEEECSSSEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTT--BCCEEEEEEEE-CSSSEEEEEEEECC
T ss_pred EEEEEeeCCCeEEEEEEECCEEEEEEEECccchhhHHHHHHHHHHhcCCCCC--CCcEEEEEEec-CCCceEEEEEecCC
Confidence 334344577888877666665 568999887665544321111001125776 67999987644 22245678999866
No 14
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=48.62 E-value=48 Score=31.30 Aligned_cols=74 Identities=12% Similarity=0.169 Sum_probs=45.5
Q ss_pred cccCCCCccceEEEeeCC-cEEEEecCHHHHHHHHHHHHHHHHHhhcCCCceeEeeEeeEEEEecCCeEEEEEEEeee
Q 009288 406 ELSSPGKSGSFFYLTQDD-RFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNL 482 (538)
Q Consensus 406 ~~~s~GkSgs~f~~t~D~-rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~N~ 482 (538)
+....|..|..|--+.++ .+.||.++..+...+..-..-+..-...||| +++++|.+.... ......++||+-+
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~n--iv~~~~~~~~~~-~~~~~~~lv~e~~ 88 (301)
T 3q4u_A 14 ECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHEN--ILGFIASDMTSR-HSSTQLWLITHYH 88 (301)
T ss_dssp EEEEECSSEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHTCCCCTT--BCCEEEEEEEEE-TTEEEEEEEECCC
T ss_pred EeeccCCCcEEEEEEECCEEEEEEEeccccchhhHHHHHHHHHhhccCcC--eeeEEEeecccc-CCCceeEEehhhc
Confidence 334457778777665554 4788999887665554432222222245665 678888766543 3356678999855
No 15
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=48.54 E-value=29 Score=33.61 Aligned_cols=73 Identities=15% Similarity=0.190 Sum_probs=45.4
Q ss_pred cCCCCccceEEEeeC-CcEEEEecCHHHHHHHHHHHHHHHHHhhcCCCceeEeeEeeEEEEecCCeEEEEEEEeee
Q 009288 408 SSPGKSGSFFYLTQD-DRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNL 482 (538)
Q Consensus 408 ~s~GkSgs~f~~t~D-~rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~N~ 482 (538)
...|..|.+|--+.+ ..+.||.++......+.....-+......+|+ ++++++.+......+...+++||+-+
T Consensus 21 lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~--i~~~~~~~~~~~~~~~~~~~lv~e~~ 94 (336)
T 3g2f_A 21 IGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDN--IARFIVGDERVTADGRMEYLLVMEYY 94 (336)
T ss_dssp EEECSSEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTT--BCCEEEEEEEECTTSCEEEEEEECCC
T ss_pred cccCCCeEEEEEEECCeEEEEEEeeccchhhHHHHHHHHHHHhccCcc--hhhheecccccccCCCceEEEEEecC
Confidence 344777777765554 45778999876655444322211111235554 67888877665566677789999975
No 16
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=42.30 E-value=38 Score=32.00 Aligned_cols=73 Identities=14% Similarity=0.159 Sum_probs=41.0
Q ss_pred ccCCCCccceEEEee-CCcEEEEecCHHHHHHHHHHHHHHHHHhhcCCCceeEeeEeeEEEEecCCeEEEEEEEeee
Q 009288 407 LSSPGKSGSFFYLTQ-DDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNL 482 (538)
Q Consensus 407 ~~s~GkSgs~f~~t~-D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~N~ 482 (538)
....|..|..|--.. ...+.||.+++.+...+.+-..-+-.-...||+ ++++++.+... .......++||+.+
T Consensus 10 ~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~--i~~~~~~~~~~-~~~~~~~~lv~e~~ 83 (303)
T 3gxj_A 10 SIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHEN--ILGFIAADNKD-NGTWTQLWLVSDYH 83 (303)
T ss_dssp EEEECSSSEEEEC-CTTSCEEEEECC-TTHHHHHHHHHHHTSTTCCC-C--BCCEEEEEEEE-CSSSEEEEEEEECC
T ss_pred hccCCCCeEEEEEEEcCcceEEEEecccchhhHHHHHHHHHHHhccCcc--eeeeeeecccC-CCccceeEEEEecc
Confidence 344566777765444 446889999987665544322211111134554 67888887654 22234678899865
No 17
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=36.08 E-value=56 Score=31.32 Aligned_cols=73 Identities=10% Similarity=0.141 Sum_probs=44.6
Q ss_pred cCCCCccceEEEee---CCcEEEEecCHHHHHHHHHHHHHHH--HHhhcCCCceeEeeEeeEEEEec---CCeEEEEEEE
Q 009288 408 SSPGKSGSFFYLTQ---DDRFMIKTVKKSEVKVLIRMLPSYY--QHVCQYKNTLVTKFFGVHCVKPV---GGQKTRFIVM 479 (538)
Q Consensus 408 ~s~GkSgs~f~~t~---D~rfiiKti~~~E~~~l~~~lp~Y~--~~~~~~~~tLL~k~~Gl~~i~~~---~~~~~~fvVM 479 (538)
...|..|.+|-... ...++||.+...+......++.... ..+..||+ ++++++++.+... ......+|||
T Consensus 36 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~--iv~~~~~~~~~~~~~~~~~~~~~lv~ 113 (337)
T 3ll6_A 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPN--IVQFCSAASIGKEESDTGQAEFLLLT 113 (337)
T ss_dssp EECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTT--BCCEEEEEEECTTTSTTSSEEEEEEE
T ss_pred EccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCC--hhhccccccccccccccCCceEEEEE
Confidence 44577777776653 4569999985544433333333322 22334664 6789998876532 3467788999
Q ss_pred eee
Q 009288 480 GNL 482 (538)
Q Consensus 480 ~N~ 482 (538)
+-+
T Consensus 114 e~~ 116 (337)
T 3ll6_A 114 ELC 116 (337)
T ss_dssp ECC
T ss_pred Eec
Confidence 865
No 18
>4frf_A Inositol polyphosphate multikinase alpha; ATP grAsp, inositol phosphate kinase, transferase; 2.90A {Arabidopsis thaliana}
Probab=31.63 E-value=11 Score=37.22 Aligned_cols=78 Identities=21% Similarity=0.373 Sum_probs=28.8
Q ss_pred CCCCccceEEEeeCCcEEEEecCH-----HHHHHHHHHHHH--HHHHhhcCCCceeEeeEeeEEEEecCCeEEEEEEEee
Q 009288 409 SPGKSGSFFYLTQDDRFMIKTVKK-----SEVKVLIRMLPS--YYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGN 481 (538)
Q Consensus 409 s~GkSgs~f~~t~D~rfiiKti~~-----~E~~~l~~~lp~--Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~N 481 (538)
..|+.|.+ ...++ .|+|=+.. .|+++..++..+ .-..| ..++|+|+|...+. +.....||||+|
T Consensus 5 ~~Gh~G~l--~~~~G-~v~KP~~~~~rg~~E~~FYe~l~~~~~~~~~L----~~fvP~y~G~~~~~--~~~~~~~i~LEd 75 (275)
T 4frf_A 5 KDGKPGPL--VDDKG-RFFKPLQGDSRGEIEVKFYESFSSNTEVPEHI----HRYFPVYHGTQAVE--GSDGAAMMVLEN 75 (275)
T ss_dssp ----------------------------CCHHHHHHHHHHCTTSCHHH----HTTSCCBCCC------------CCCBCC
T ss_pred CCCCCCce--ECCCC-cEEeecCCCCcchHHHHHHHHHhhCCCchHHH----HhhCcCCceeEEec--CCCCccEEEEee
Confidence 35777753 34444 57898764 688887665321 00001 13489999998775 233457999999
Q ss_pred eccCCCceeeEEEee
Q 009288 482 LFCSEYRIHRRFDLK 496 (538)
Q Consensus 482 ~f~~~~~i~~~yDLK 496 (538)
|-..- .--.+=|||
T Consensus 76 Lt~gf-~~PcVlDiK 89 (275)
T 4frf_A 76 LLAEY-TKPSVMDVK 89 (275)
T ss_dssp GGGGC-SSEEEEEEE
T ss_pred ccccc-CCCceeEee
Confidence 96432 223456888
No 19
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=30.82 E-value=43 Score=32.39 Aligned_cols=74 Identities=14% Similarity=0.126 Sum_probs=43.3
Q ss_pred ccCCCCccceEEEeeCC-cEEEEecCHHHHHHHHHHHHHHHHHhhcCCCceeEeeEeeEEEEecCCeEEEEEEEeeec
Q 009288 407 LSSPGKSGSFFYLTQDD-RFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLF 483 (538)
Q Consensus 407 ~~s~GkSgs~f~~t~D~-rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~N~f 483 (538)
....|..|..|--..++ .++||.+++.+...+.+-..-+-.-...||+ ++++++.+... .......++||+.+-
T Consensus 49 ~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~n--i~~~~~~~~~~-~~~~~~~~lv~e~~~ 123 (342)
T 1b6c_B 49 SIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHEN--ILGFIAADNKD-NGTWTQLWLVSDYHE 123 (342)
T ss_dssp EEEEETTEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHSCCCCTT--BCCEEEEEECC-CSSCCCEEEEECCCT
T ss_pred eecCCCCcEEEEEEEcCccEEEEEeCchhHHHHHHHHHHHHHhhcCCCc--EEEEEeeeccc-CCccceeEEEEeecC
Confidence 34457777777665544 5788999887665544322222211135665 67888876543 111235788998753
No 20
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=29.45 E-value=1.2e+02 Score=29.10 Aligned_cols=72 Identities=8% Similarity=0.065 Sum_probs=42.1
Q ss_pred cCCCCccceEEEeeCC-cEEEEecCHHHHHHHHHHHHHHHHHhhcCCCceeEeeEeeEEEEecCCeEEEEEEEeee
Q 009288 408 SSPGKSGSFFYLTQDD-RFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNL 482 (538)
Q Consensus 408 ~s~GkSgs~f~~t~D~-rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~N~ 482 (538)
...|..|.+|--...+ .+.||.++..+......... ..-+..-.+.-|++++|++..... .....++||+-+
T Consensus 32 lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~E--~~~l~~l~hpniv~~~~~~~~~~~-~~~~~~lv~e~~ 104 (322)
T 3soc_A 32 KARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYE--VYSLPGMKHENILQFIGAEKRGTS-VDVDLWLITAFH 104 (322)
T ss_dssp EECSTTCEEEEEEETTEEEEEEEECGGGHHHHHHHHH--HHTSTTCCCTTBCCEEEEEEEECS-SSEEEEEEEECC
T ss_pred ecccCceEEEEEEECCCEEEEEEeecCchHHHHHHHH--HHHHhcCCCCCchhhcceeccCCC-CCceEEEEEecC
Confidence 4457778777765544 47889998765444332221 111222223347899998876522 244568999865
No 21
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=27.66 E-value=2.1e+02 Score=27.98 Aligned_cols=75 Identities=20% Similarity=0.311 Sum_probs=44.5
Q ss_pred ccCCCCccceEEEee--------CCcEEEEecCHH------HHHHHHHHHHH-H---HHHhhcCCCceeEeeEeeEEEEe
Q 009288 407 LSSPGKSGSFFYLTQ--------DDRFMIKTVKKS------EVKVLIRMLPS-Y---YQHVCQYKNTLVTKFFGVHCVKP 468 (538)
Q Consensus 407 ~~s~GkSgs~f~~t~--------D~rfiiKti~~~------E~~~l~~~lp~-Y---~~~~~~~~~tLL~k~~Gl~~i~~ 468 (538)
....|..|.+|--.. +..+.||.+... |++.+.++... . +..+..-.+.-+++++|.+...
T Consensus 42 ~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~- 120 (364)
T 3op5_A 42 PIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHD- 120 (364)
T ss_dssp ECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEEE-
T ss_pred EEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeeec-
Confidence 344577777776544 356899998754 45555543221 1 1122222334478999987765
Q ss_pred cCCeEEEEEEEeee
Q 009288 469 VGGQKTRFIVMGNL 482 (538)
Q Consensus 469 ~~~~~~~fvVM~N~ 482 (538)
..+....+|||+.+
T Consensus 121 ~~~~~~~~lv~e~~ 134 (364)
T 3op5_A 121 KNGKSYRFMIMDRF 134 (364)
T ss_dssp ETTEEEEEEEEECE
T ss_pred cCCcceEEEEEeCC
Confidence 34467789999986
No 22
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=24.92 E-value=1.5e+02 Score=28.02 Aligned_cols=72 Identities=7% Similarity=0.031 Sum_probs=39.2
Q ss_pred cCCCCccceEEEe---eCCcEEEEecCHHHHHHHHHHHHHHHHHh--hcCCCceeEeeEeeEEEEecCCeEEEEEEEeee
Q 009288 408 SSPGKSGSFFYLT---QDDRFMIKTVKKSEVKVLIRMLPSYYQHV--CQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNL 482 (538)
Q Consensus 408 ~s~GkSgs~f~~t---~D~rfiiKti~~~E~~~l~~~lp~Y~~~~--~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~N~ 482 (538)
...|..|.+|... ....++||.+..........+.... .-+ ..||+ ++++++.+... .+.....++||+-+
T Consensus 37 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~-~~l~~l~h~~--iv~~~~~~~~~-~~~~~~~~lv~e~~ 112 (317)
T 2buj_A 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREA-DMHRLFNHPN--ILRLVAYCLRE-RGAKHEAWLLLPFF 112 (317)
T ss_dssp EEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHH-HHHHTCCCTT--BCCCCEEEEEE-ETTEEEEEEEEECC
T ss_pred ecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHH-HHHhhcCCCC--eeeEEEEEEec-cCCCceeEEEEEeC
Confidence 3457777776654 2456889988543222222222211 112 24565 78899987654 34466778899865
Q ss_pred c
Q 009288 483 F 483 (538)
Q Consensus 483 f 483 (538)
-
T Consensus 113 ~ 113 (317)
T 2buj_A 113 K 113 (317)
T ss_dssp T
T ss_pred C
Confidence 3
No 23
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=24.50 E-value=1.9e+02 Score=29.08 Aligned_cols=68 Identities=19% Similarity=0.256 Sum_probs=39.5
Q ss_pred CCCCccceEEEee---CCcEEEEecCHHHHHHHHHHHHHHHHHhhcCCCceeEeeEeeEEEEecCCeEEEEEEEeee
Q 009288 409 SPGKSGSFFYLTQ---DDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNL 482 (538)
Q Consensus 409 s~GkSgs~f~~t~---D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~N~ 482 (538)
..|..|.++.... ...+.||.+...+ ...++ +.. ...+..||+ +++++++|..... +....+|||+-+
T Consensus 71 G~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~E-~~~-~~~~~~hp~--iv~l~~~~~~~~~-~~~~~~lv~E~~ 141 (400)
T 1nxk_A 71 GLGINGKVLQIFNKRTQEKFALKMLQDCP-KARRE-VEL-HWRASQCPH--IVRIVDVYENLYA-GRKCLLIVMECL 141 (400)
T ss_dssp EEETTEEEEEEEETTTCCEEEEEEEECSH-HHHHH-HHH-HHHHTTSTT--BCCEEEEEEEEET-TEEEEEEEEECC
T ss_pred eeccCeEEEEEEECCCCCEEEEEEeCcch-hHHHH-HHH-HHHhcCCCC--cceEeEEEeeccc-CCcEEEEEEEeC
Confidence 3466677766543 3459999996432 11111 110 012335565 6789998876433 356778999875
No 24
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=23.71 E-value=87 Score=29.50 Aligned_cols=71 Identities=15% Similarity=0.162 Sum_probs=35.8
Q ss_pred CCCCccceEEEe-------eCCcEEEEecCHHHHHHHHHHHHHHHHHhhcCCCceeEeeEeeEEEEecCCeEEEEEEEee
Q 009288 409 SPGKSGSFFYLT-------QDDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGN 481 (538)
Q Consensus 409 s~GkSgs~f~~t-------~D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~N 481 (538)
..|..|..|... ....++||.+.........+.+..=..-+..-.+.-++++++++... +....++||+.
T Consensus 30 g~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~~~lv~e~ 106 (302)
T 4e5w_A 30 GEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED---GGNGIKLIMEF 106 (302)
T ss_dssp EECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC------CCEEEEEEC
T ss_pred CCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecC---CCceEEEEEEe
Confidence 347778777655 45678999998653221111111111222222233477888876632 23446789986
Q ss_pred e
Q 009288 482 L 482 (538)
Q Consensus 482 ~ 482 (538)
+
T Consensus 107 ~ 107 (302)
T 4e5w_A 107 L 107 (302)
T ss_dssp C
T ss_pred C
Confidence 5
No 25
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=23.48 E-value=2.3e+02 Score=27.43 Aligned_cols=75 Identities=24% Similarity=0.314 Sum_probs=40.9
Q ss_pred ccCCCCccceEEEee------CCcEEEEecCH------HHHHHHHHHHH----HHHHHhhcCCCceeEeeEeeEEEEecC
Q 009288 407 LSSPGKSGSFFYLTQ------DDRFMIKTVKK------SEVKVLIRMLP----SYYQHVCQYKNTLVTKFFGVHCVKPVG 470 (538)
Q Consensus 407 ~~s~GkSgs~f~~t~------D~rfiiKti~~------~E~~~l~~~lp----~Y~~~~~~~~~tLL~k~~Gl~~i~~~~ 470 (538)
....|..|.+|-... ...++||.+.. .|.+.+.++.. .-+..+..-.+.-+++++|.+.... .
T Consensus 44 ~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~-~ 122 (345)
T 2v62_A 44 KIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEF-K 122 (345)
T ss_dssp EC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEES-S
T ss_pred eEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeeccccccc-C
Confidence 344566677766543 45789999875 34555554321 1122233223334789999887654 3
Q ss_pred CeEEEEEEEeee
Q 009288 471 GQKTRFIVMGNL 482 (538)
Q Consensus 471 ~~~~~fvVM~N~ 482 (538)
+....+|||+.+
T Consensus 123 ~~~~~~lv~e~~ 134 (345)
T 2v62_A 123 GRSYRFMVMERL 134 (345)
T ss_dssp SCEEEEEEEECE
T ss_pred CCcEEEEEEecc
Confidence 356788999986
No 26
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=23.23 E-value=49 Score=25.43 Aligned_cols=39 Identities=18% Similarity=0.156 Sum_probs=0.0
Q ss_pred EEEEcCCcEEEEEEEC-CeEeceeEEEeCCCCeEEEEEeC
Q 009288 74 KYVWSDRCMYEGEWRK-GRASGKGKFSWPSGATYEGGFKS 112 (538)
Q Consensus 74 ~~~~~dG~~YeG~w~~-G~~~G~G~~~~~~G~~YeG~f~~ 112 (538)
...|+||..|+|.... ++..|...+.|.|+..+.-.|++
T Consensus 21 LA~wtDGl~Y~gtI~~V~~~~gtC~V~F~D~s~~w~~~kd 60 (66)
T 2eqj_A 21 LARWSDGLFYLGTIKKINILKQSCFIIFEDSSKSWVLWKD 60 (66)
T ss_dssp EEECTTSCEEEEEEEEEETTTTEEEEEETTTEEEEEETTT
T ss_pred EEEEccCcEEEeEEEEEccCCcEEEEEEccCCEEEEEeec
No 27
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=21.85 E-value=1.3e+02 Score=28.24 Aligned_cols=74 Identities=18% Similarity=0.201 Sum_probs=36.9
Q ss_pred ccCCCCccceEEEee---CCcEEEEecCHHHHHHHHHHHHHHHHHh-hcCCCceeEeeEeeEEEE---------ecCCeE
Q 009288 407 LSSPGKSGSFFYLTQ---DDRFMIKTVKKSEVKVLIRMLPSYYQHV-CQYKNTLVTKFFGVHCVK---------PVGGQK 473 (538)
Q Consensus 407 ~~s~GkSgs~f~~t~---D~rfiiKti~~~E~~~l~~~lp~Y~~~~-~~~~~tLL~k~~Gl~~i~---------~~~~~~ 473 (538)
....|..|..|.... +..++||.+...+.....+++...-..- ..||+ ++++++++... ......
T Consensus 18 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~--iv~~~~~~~~~~~~~~~~~~~~~~~~ 95 (320)
T 2i6l_A 18 PLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDN--IVKVFEILGPSGSQLTDDVGSLTELN 95 (320)
T ss_dssp ECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTT--BCCEEEEECTTSCBCCC----CCSCS
T ss_pred EeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCC--eeEEEEeccccccccccccccccccC
Confidence 344566777776544 4568999886544433333333322111 14554 67888876321 112235
Q ss_pred EEEEEEeee
Q 009288 474 TRFIVMGNL 482 (538)
Q Consensus 474 ~~fvVM~N~ 482 (538)
..++||+.+
T Consensus 96 ~~~lv~e~~ 104 (320)
T 2i6l_A 96 SVYIVQEYM 104 (320)
T ss_dssp EEEEEEECC
T ss_pred ceeEEeecc
Confidence 678899865
No 28
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=21.45 E-value=87 Score=30.63 Aligned_cols=71 Identities=17% Similarity=0.296 Sum_probs=47.2
Q ss_pred cCCCCccceEEEee-----------CCcEEEEecCH-----HHHHHHHHH----HHHHHHHhhcCCCceeEeeEeeEEEE
Q 009288 408 SSPGKSGSFFYLTQ-----------DDRFMIKTVKK-----SEVKVLIRM----LPSYYQHVCQYKNTLVTKFFGVHCVK 467 (538)
Q Consensus 408 ~s~GkSgs~f~~t~-----------D~rfiiKti~~-----~E~~~l~~~----lp~Y~~~~~~~~~tLL~k~~Gl~~i~ 467 (538)
...|..|.+|-... ...++||.+.+ .|++.|.++ +-.++.++...+..-++++++.....
T Consensus 50 lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~~~~~~~ 129 (352)
T 2jii_A 50 QTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQ 129 (352)
T ss_dssp EEEETTEEEEEEEECC-----------CEEEEEEETTSTHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCCCEEEEET
T ss_pred ecCCCCeEEEEEeecCCccccccccCceEEEEEecccchHHHHHHHHHHhcccchhhhhhhhccCCccCccchhhccccC
Confidence 34466777766543 45799999975 477777753 44566667777767788888876542
Q ss_pred ecCCeEEEEEEEeee
Q 009288 468 PVGGQKTRFIVMGNL 482 (538)
Q Consensus 468 ~~~~~~~~fvVM~N~ 482 (538)
....++||+-+
T Consensus 130 ----~~~~~lv~e~~ 140 (352)
T 2jii_A 130 ----DKYRFLVLPSL 140 (352)
T ss_dssp ----TTEEEEEEECC
T ss_pred ----CcEEEEEecCC
Confidence 34678899855
No 29
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=21.16 E-value=50 Score=32.16 Aligned_cols=75 Identities=15% Similarity=0.239 Sum_probs=39.8
Q ss_pred ccccCCCCccceEEEee---CCcEEEEecCHHHHHHHH-HHHHHHHHHhh--cCCCceeEeeEeeEEEEecCCeEEEEEE
Q 009288 405 RELSSPGKSGSFFYLTQ---DDRFMIKTVKKSEVKVLI-RMLPSYYQHVC--QYKNTLVTKFFGVHCVKPVGGQKTRFIV 478 (538)
Q Consensus 405 ~~~~s~GkSgs~f~~t~---D~rfiiKti~~~E~~~l~-~~lp~Y~~~~~--~~~~tLL~k~~Gl~~i~~~~~~~~~fvV 478 (538)
......|..|.+|.... ...++||.+......... +++.. ..-+. .||+ +++++|++...........++|
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E-~~~l~~l~h~~--iv~~~~~~~~~~~~~~~~~~lv 92 (353)
T 2b9h_A 16 KSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLRE-IKILKHFKHEN--IITIFNIQRPDSFENFNEVYII 92 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHH-HHHHHHCCCTT--BCCEEEECCCSCSTTCCCEEEE
T ss_pred eeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHH-HHHHHhCcCCC--cCCeeeeecccccCccceEEEE
Confidence 33444577787776654 335889998643211111 11111 11122 4554 6788887654322223557889
Q ss_pred Eeee
Q 009288 479 MGNL 482 (538)
Q Consensus 479 M~N~ 482 (538)
|+.+
T Consensus 93 ~e~~ 96 (353)
T 2b9h_A 93 QELM 96 (353)
T ss_dssp ECCC
T ss_pred Eecc
Confidence 9875
No 30
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=20.47 E-value=1.8e+02 Score=27.36 Aligned_cols=70 Identities=16% Similarity=0.234 Sum_probs=36.5
Q ss_pred cCCCCccceEEEee---CCcEEEEecCHHH-HHHHHHHHHHHHHHhhcCCCceeEeeEeeEEEEecCCeEEEEEEEeee
Q 009288 408 SSPGKSGSFFYLTQ---DDRFMIKTVKKSE-VKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNL 482 (538)
Q Consensus 408 ~s~GkSgs~f~~t~---D~rfiiKti~~~E-~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~N~ 482 (538)
...|..|..|-... +..++||.+.... .....+++......+....+.-+++++|.+.- ....++||+-+
T Consensus 33 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~-----~~~~~lv~e~~ 106 (318)
T 2dyl_A 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFIT-----NTDVFIAMELM 106 (318)
T ss_dssp C------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----SSEEEEEECCC
T ss_pred eeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEec-----CCcEEEEEecc
Confidence 34466677776544 4578999996532 12222333333333443334457889987652 23568899865
No 31
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=20.11 E-value=2.4e+02 Score=26.67 Aligned_cols=66 Identities=26% Similarity=0.367 Sum_probs=41.2
Q ss_pred cCCCCccceEEEee---CCc-EEEEecCH------------HHHHHHHHHHHHHHHHhh--cCCCceeEeeEeeEEEEec
Q 009288 408 SSPGKSGSFFYLTQ---DDR-FMIKTVKK------------SEVKVLIRMLPSYYQHVC--QYKNTLVTKFFGVHCVKPV 469 (538)
Q Consensus 408 ~s~GkSgs~f~~t~---D~r-fiiKti~~------------~E~~~l~~~lp~Y~~~~~--~~~~tLL~k~~Gl~~i~~~ 469 (538)
...|..|..|-... +++ ++||.+.. .|+..+ ..+. .||+ ++++++++.+...
T Consensus 19 lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l--------~~l~~~~h~~--i~~~~~~~~~~~~ 88 (326)
T 1blx_A 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL--------RHLETFEHPN--VVRLFDVCTVSRT 88 (326)
T ss_dssp EEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHH--------HHHHHTCCTT--BCCEEEEEEEEEC
T ss_pred ecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHH--------HhhhccCCCC--eEeeeeeeeeccc
Confidence 34466677776543 344 67898753 222222 2233 4554 7899999887655
Q ss_pred CCeEEEEEEEeeec
Q 009288 470 GGQKTRFIVMGNLF 483 (538)
Q Consensus 470 ~~~~~~fvVM~N~f 483 (538)
......++||+.+-
T Consensus 89 ~~~~~~~lv~e~~~ 102 (326)
T 1blx_A 89 DRETKLTLVFEHVD 102 (326)
T ss_dssp SSEEEEEEEEECCS
T ss_pred CCCceEEEEEecCC
Confidence 55778899999763
Done!