Query 009288
Match_columns 538
No_of_seqs 530 out of 2387
Neff 6.8
Searched_HMMs 13730
Date Mon Mar 25 23:07:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009288.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/009288hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1bo1a_ d.143.1.2 (A:) Phospha 100.0 1.9E-57 1.3E-61 473.0 19.3 217 314-537 6-228 (383)
2 d1w2fa_ d.143.1.3 (A:) Inosito 74.1 1.8 0.00013 40.3 5.6 75 410-498 7-81 (276)
3 d2f69a1 b.76.2.1 (A:116-193) H 66.4 5.1 0.00037 29.6 5.4 47 162-208 1-50 (78)
4 d2f69a1 b.76.2.1 (A:116-193) H 60.5 4.7 0.00034 29.9 4.2 46 70-115 1-49 (78)
5 d1vjya_ d.144.1.7 (A:) Type I 32.4 58 0.0042 29.3 8.3 77 404-483 7-84 (303)
6 d2g3ra1 b.34.9.1 (A:1485-1537) 25.3 67 0.0049 21.0 5.0 37 48-84 6-42 (53)
7 d1eeja2 d.17.3.1 (A:1-60) Disu 24.4 17 0.0012 25.5 2.0 22 403-427 26-47 (60)
8 d1o6ya_ d.144.1.7 (A:) Mycobac 21.4 83 0.0061 27.5 7.0 71 408-482 15-93 (277)
9 d1jksa_ d.144.1.7 (A:) Death-a 19.7 80 0.0058 28.0 6.5 65 409-482 19-95 (293)
10 d1blxa_ d.144.1.7 (A:) Cyclin- 19.6 67 0.0049 28.5 5.9 70 410-483 17-98 (305)
No 1
>d1bo1a_ d.143.1.2 (A:) Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1.9e-57 Score=472.97 Aligned_cols=217 Identities=30% Similarity=0.520 Sum_probs=191.3
Q ss_pred cHHHHHHHHHHHHhhhcCC--CcccccCCcccCCCceeeEeeCCCCCCCCCCCCccCCeEEEEcCHHHHHHHHHHhCCCh
Q 009288 314 NYDLMLNLQLGIRHSVGKH--ASVMRELRQSDFEPKEKFWTRFPPEGSKFTPPHQSMDFRWKDYCPMVFRHLRELFAIDP 391 (538)
Q Consensus 314 ~~~l~~~~~~Gi~~~i~~~--~~~~~~l~~~df~~~~k~~~~f~~~~~~~~~~~~~~~f~~k~y~P~~F~~lR~~~~i~~ 391 (538)
+.+||.+||||||+||+++ .+.++.|+|+||++..++.+ +|+..+|+|..++|+||||||.||++||++|||++
T Consensus 6 ~~~l~~~~~~Gi~~sv~~l~~~~~~~~L~~~dF~~~~k~~~----~~~~~~~~~~~~~fkfk~Y~P~vF~~lR~~fgi~~ 81 (383)
T d1bo1a_ 6 SEPILSVLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKV----DNHLFNKENLPSRFKFKEYCPMVFRNLRERFGIDD 81 (383)
T ss_dssp SSHHHHHHHHHHHHHHHHHTTSCCCSSCCGGGGTCEEEEEE----ECBSSSCSSSCSEEEEEEECHHHHHHHHHHTTCCH
T ss_pred chHHHHHHHHhHHHHHHhhcCCCcchhcCcccceeeEEEec----CCCCCCcCCCCCCeEEEEeCHHHHHHHHHHcCCCH
Confidence 4799999999999999998 34556699999999887653 57778888888999999999999999999999999
Q ss_pred HHHHHhhcCCcccccccCCCCccceEEEeeCCcEEEEecCHHHHHHHHHHHHHHHHHhh-cCCCceeEeeEeeEEEEecC
Q 009288 392 ADYMLAICGDDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYYQHVC-QYKNTLVTKFFGVHCVKPVG 470 (538)
Q Consensus 392 ~~y~~Sl~~~~~~~~~~s~GkSgs~f~~t~D~rfiiKti~~~E~~~l~~~lp~Y~~~~~-~~~~tLL~k~~Gl~~i~~~~ 470 (538)
+||+.|||++..+ +..|+|||||+||+|+|+|||||||+++|+++|+++||.||+||. +||+||||||||||+|++ +
T Consensus 82 ~dy~~Sl~~~~~~-~~~s~GkSGs~F~~t~D~rfiiKti~~~E~~~l~~~l~~Y~~h~~~~n~~TLL~k~~Gly~i~~-~ 159 (383)
T d1bo1a_ 82 QDYQNSVTRSAPI-NSDSQGRCGTRFLTTYDRRFVIKTVSSEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTV-D 159 (383)
T ss_dssp HHHHHHHHSSCCE-ECCCC----CCEEECTTSSEEEECCCHHHHHHHHHHHHHHHHHHHTTTTCCSSCCEEEEEEEEE-T
T ss_pred HHHHHHhCCCccc-cccccCCcCCeEEEecCCcEEEEEeCHHHHHHHHHHHHHHHHHHHhcCCCcCHHhhheeeEEEe-C
Confidence 9999999987655 457899999999999999999999999999999999999999995 599999999999999996 4
Q ss_pred CeEEEEEEEeeeccCCCceeeEEEeeccCcCCccCCCccccCCCCcEeeCCC---cccccCCHHHHHHHh
Q 009288 471 GQKTRFIVMGNLFCSEYRIHRRFDLKGSSYGRITDKPEEEIDETTTLKDLDL---DFVFRLDRSWFQELI 537 (538)
Q Consensus 471 ~~~~~fvVM~N~f~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~~lKD~d~---~~~~~~~~~~~~~~~ 537 (538)
+.++|||||+|||++...||++||||||+++|.+++.+ ..++.+||||+|| +..+++.+..++.|+
T Consensus 160 ~~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~-~~~~~~~lKD~df~~~~~~i~l~~~~k~~l~ 228 (383)
T d1bo1a_ 160 GVETYMVVTRNVFSHRLTVHRKYDLKGSTVAREASDKE-KAKDLPTFKDNDFLNEGQKLHVGEESKKNFL 228 (383)
T ss_dssp TEEEEEEEEECSSCSSSCCSEEEEECCCSSSSCSCSGG-GSSSCCEECHHHHHHTTCCCCCCSSHHHHHH
T ss_pred CceEEEEEEeccccCCcccceeEeccCcccccCcCccc-ccccchhhhhHHHHhccCCeeeCHHHHHHHH
Confidence 59999999999999999999999999999999997754 4467899999998 556888888887775
No 2
>d1w2fa_ d.143.1.3 (A:) Inositol 1,4,5-trisphosphate 3-kinase A, IP3K A {Human (Homo sapiens) [TaxId: 9606]}
Probab=74.08 E-value=1.8 Score=40.34 Aligned_cols=75 Identities=21% Similarity=0.288 Sum_probs=51.4
Q ss_pred CCCccceEEEeeCCcEEEEecCHHHHHHHHHHHHHHHHHhhcCCCceeEeeEeeEEEEecCCeEEEEEEEeeeccCCCce
Q 009288 410 PGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNLFCSEYRI 489 (538)
Q Consensus 410 ~GkSgs~f~~t~D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~N~f~~~~~i 489 (538)
+|=+|++ -.+.|+..|+|-+...|+.+..++-++ .-..++|+|+|+-.+. + -.+|||+||-..- .-
T Consensus 7 aGH~g~~-~~~~~~~~i~Kp~~~~E~~FY~~l~~~-------~L~~f~P~y~G~~~~~--~---~~~I~Ledlt~g~-~~ 72 (276)
T d1w2fa_ 7 AGHTGSF-KAAGTSGLILKRCSEPERYCLARLMAD-------ALRGCVPAFHGVVERD--G---ESYLQLQDLLDGF-DG 72 (276)
T ss_dssp TTCCSCC-EECSSTTEEEEECCHHHHHHHHHHHTS-------GGGGGSCCEEEEEEET--T---EEEEEEECTTTTC-SS
T ss_pred CCCCCcc-cccCCCCEEEccCCcHHHHHHHHhhhh-------hHHhhCcccceEEEEC--C---eEEEEehhhhccc-CC
Confidence 4555544 346788999999999999988775332 2345789999986543 2 3599999997532 22
Q ss_pred eeEEEeecc
Q 009288 490 HRRFDLKGS 498 (538)
Q Consensus 490 ~~~yDLKGS 498 (538)
..+=|||=.
T Consensus 73 PcVlDiKmG 81 (276)
T d1w2fa_ 73 PCVLDCKMG 81 (276)
T ss_dssp CEEEEEEES
T ss_pred Cceeeeeec
Confidence 235588843
No 3
>d2f69a1 b.76.2.1 (A:116-193) Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=66.44 E-value=5.1 Score=29.65 Aligned_cols=47 Identities=19% Similarity=0.273 Sum_probs=29.2
Q ss_pred eeeEEEEEcCCCEEEEEEe-CCeEeeeEE-EEecCCC-EEEEEEECCeee
Q 009288 162 DGYGKYAWSDGNVYEGEWK-NGVIFGKGT-LSWNNGN-RYEGCWDNGLPK 208 (538)
Q Consensus 162 ~G~G~~~~~nG~~Y~G~w~-~G~~~G~G~-~~~~nG~-~yeG~w~~G~~~ 208 (538)
||.+-++++||..-.|+-. +|.+.|.-+ +.|+|+. .+.|.|.+|.+-
T Consensus 1 ~G~Cw~y~pdGGslvG~vne~gEmtGd~IAYvYPD~~talyGsF~dgemi 50 (78)
T d2f69a1 1 HGVCWIYYPDGGSLVGEVNEDGEMTGEKIAYVYPDERTALYGKFIDGEMI 50 (78)
T ss_dssp CCCEEEECTTSCEEEECCCTTSCCCEEEEEEECTTSSEEEEEEEETTEEE
T ss_pred CceeEEEeCCCCEEEeeecCCCccccceEEEEcCCCeEEEEEEeecccee
Confidence 3455566667666666664 366666665 4566666 566777766554
No 4
>d2f69a1 b.76.2.1 (A:116-193) Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=60.49 E-value=4.7 Score=29.86 Aligned_cols=46 Identities=30% Similarity=0.504 Sum_probs=25.9
Q ss_pred eeeEEEEEcCCcEEEEEE-ECCeEeceeE-EEeCCCCe-EEEEEeCCee
Q 009288 70 HGVGKYVWSDRCMYEGEW-RKGRASGKGK-FSWPSGAT-YEGGFKSGRM 115 (538)
Q Consensus 70 ~G~G~~~~~dG~~YeG~w-~~G~~~G~G~-~~~~~G~~-YeG~f~~g~~ 115 (538)
||..-++++||..-.|+. .+|.+.|.-+ +.|||+.+ +-|.|.+|.|
T Consensus 1 ~G~Cw~y~pdGGslvG~vne~gEmtGd~IAYvYPD~~talyGsF~dgem 49 (78)
T d2f69a1 1 HGVCWIYYPDGGSLVGEVNEDGEMTGEKIAYVYPDERTALYGKFIDGEM 49 (78)
T ss_dssp CCCEEEECTTSCEEEECCCTTSCCCEEEEEEECTTSSEEEEEEEETTEE
T ss_pred CceeEEEeCCCCEEEeeecCCCccccceEEEEcCCCeEEEEEEeeccce
Confidence 455556666666666665 3455665543 34566653 5666666544
No 5
>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.41 E-value=58 Score=29.33 Aligned_cols=77 Identities=13% Similarity=0.116 Sum_probs=46.1
Q ss_pred cccccCCCCccceEEEeeCC-cEEEEecCHHHHHHHHHHHHHHHHHhhcCCCceeEeeEeeEEEEecCCeEEEEEEEeee
Q 009288 404 LRELSSPGKSGSFFYLTQDD-RFMIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRFIVMGNL 482 (538)
Q Consensus 404 ~~~~~s~GkSgs~f~~t~D~-rfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM~N~ 482 (538)
|.+....|..|.++--+.++ .+.||.++.++.+....-. -...+..-.+--|.+++|+..-. .......++||+-+
T Consensus 7 l~~~iG~G~fg~Vy~~~~~g~~vAvK~~~~~~~~~~~~e~--ei~~~~~~~HpnIv~~~~~~~~~-~~~~~~~~lv~Ey~ 83 (303)
T d1vjya_ 7 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREA--EIYQTVMLRHENILGFIAADNKD-NGTWTQLWLVSDYH 83 (303)
T ss_dssp EEEEEECCSSSEEEEEEETTEEEEEEEECGGGHHHHHHHH--HHHTSTTCCCTTBCCEEEEEEEE-CSSSEEEEEEEECC
T ss_pred EEEEEeeCCCeEEEEEEECCEEEEEEEECccchhHHHHHH--HHHHHhhCCCCcCcceEEEEEeC-CCcceEEEEEEecc
Confidence 44444567788887666666 6677999887766544322 12222222233456899986544 33345678999966
Q ss_pred c
Q 009288 483 F 483 (538)
Q Consensus 483 f 483 (538)
-
T Consensus 84 ~ 84 (303)
T d1vjya_ 84 E 84 (303)
T ss_dssp T
T ss_pred c
Confidence 3
No 6
>d2g3ra1 b.34.9.1 (A:1485-1537) p53-binding protein 1, 53BP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.26 E-value=67 Score=21.00 Aligned_cols=37 Identities=27% Similarity=0.420 Sum_probs=26.9
Q ss_pred eEEEEEcCCCCEEEEEEECCEEeeeEEEEEcCCcEEE
Q 009288 48 VVVEKILPNGDLYTGAVSGNAPHGVGKYVWSDRCMYE 84 (538)
Q Consensus 48 ~~~~~~~~nG~~Y~G~~~~g~~~G~G~~~~~dG~~Ye 84 (538)
..+.+..+||-+|.|....+.-.|.=++.+.||...+
T Consensus 6 rvvakwssn~yfysg~i~rd~g~~r~rl~fdd~~ece 42 (53)
T d2g3ra1 6 RVVAKWSSNGYFYSGKITRDVGAGKYKLLFDDGYECD 42 (53)
T ss_dssp EEEEECTTTCCEEEEEEEEEEETTEEEEEETTSCEEE
T ss_pred EEEEEeecCCEEEeeEEehhcCCceEEEEecCCcEEE
Confidence 4455666788888888888777777778887775443
No 7
>d1eeja2 d.17.3.1 (A:1-60) Disulfide bond isomerase, DsbC, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=24.38 E-value=17 Score=25.51 Aligned_cols=22 Identities=18% Similarity=0.561 Sum_probs=16.1
Q ss_pred ccccccCCCCccceEEEeeCCcEEE
Q 009288 403 ALRELSSPGKSGSFFYLTQDDRFMI 427 (538)
Q Consensus 403 ~~~~~~s~GkSgs~f~~t~D~rfii 427 (538)
.|-++...+ ..||.|.|++|+|
T Consensus 26 GlyeV~~~~---~i~Yvs~dG~y~i 47 (60)
T d1eeja2 26 GMKTVLTNS---GVLYITDDGKHII 47 (60)
T ss_dssp TEEEEEETT---EEEEEETTSCEEE
T ss_pred CeEEEEECC---EEEEEcCCCCEEE
Confidence 445555533 3899999999998
No 8
>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=21.42 E-value=83 Score=27.50 Aligned_cols=71 Identities=8% Similarity=0.134 Sum_probs=41.6
Q ss_pred cCCCCccceEEEee---CCcEEEEecCHH---HHHHHHHHHHHHHHHhh--cCCCceeEeeEeeEEEEecCCeEEEEEEE
Q 009288 408 SSPGKSGSFFYLTQ---DDRFMIKTVKKS---EVKVLIRMLPSYYQHVC--QYKNTLVTKFFGVHCVKPVGGQKTRFIVM 479 (538)
Q Consensus 408 ~s~GkSgs~f~~t~---D~rfiiKti~~~---E~~~l~~~lp~Y~~~~~--~~~~tLL~k~~Gl~~i~~~~~~~~~fvVM 479 (538)
...|..|.++--.+ +..+.||.|+++ +.....++....- -+. +||| ++++++++...- ......+|||
T Consensus 15 lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~-~l~~~~hpn--iv~~~~~~~~~~-~~~~~~~lvm 90 (277)
T d1o6ya_ 15 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQ-NAAALNHPA--IVAVYDTGEAET-PAGPLPYIVM 90 (277)
T ss_dssp EEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHH-HHHTCCCTT--BCCEEEEEEEEC-SSSEEEEEEE
T ss_pred EeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHH-HHHhcCCCC--CCcccceeeecc-CCCceEEEEE
Confidence 34477777766542 446779998653 1222223333322 222 5554 789999887753 3346678999
Q ss_pred eee
Q 009288 480 GNL 482 (538)
Q Consensus 480 ~N~ 482 (538)
+-+
T Consensus 91 E~~ 93 (277)
T d1o6ya_ 91 EYV 93 (277)
T ss_dssp ECC
T ss_pred ECC
Confidence 965
No 9
>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.66 E-value=80 Score=27.98 Aligned_cols=65 Identities=14% Similarity=0.141 Sum_probs=35.6
Q ss_pred CCCCccceEEEee---CCcEEEEecCHHH---------HHHHHHHHHHHHHHhhcCCCceeEeeEeeEEEEecCCeEEEE
Q 009288 409 SPGKSGSFFYLTQ---DDRFMIKTVKKSE---------VKVLIRMLPSYYQHVCQYKNTLVTKFFGVHCVKPVGGQKTRF 476 (538)
Q Consensus 409 s~GkSgs~f~~t~---D~rfiiKti~~~E---------~~~l~~~lp~Y~~~~~~~~~tLL~k~~Gl~~i~~~~~~~~~f 476 (538)
..|..|.++-... ...+.||+|++.. .+.+.+-+. .... .+||| |+++++++. . ....+
T Consensus 19 G~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~-il~~-l~Hpn--Iv~~~~~~~----~-~~~~~ 89 (293)
T d1jksa_ 19 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS-ILKE-IQHPN--VITLHEVYE----N-KTDVI 89 (293)
T ss_dssp EECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHH-HHHH-CCCTT--BCCEEEEEE----C-SSEEE
T ss_pred ecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHH-HHHh-CCCCC--CCcEEEEEE----E-CCEEE
Confidence 3466777766543 3468899986421 111111000 0111 25776 679999864 2 34467
Q ss_pred EEEeee
Q 009288 477 IVMGNL 482 (538)
Q Consensus 477 vVM~N~ 482 (538)
|||+-+
T Consensus 90 iv~E~~ 95 (293)
T d1jksa_ 90 LILELV 95 (293)
T ss_dssp EEEECC
T ss_pred EEEEcC
Confidence 889876
No 10
>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.63 E-value=67 Score=28.48 Aligned_cols=70 Identities=20% Similarity=0.341 Sum_probs=40.7
Q ss_pred CCCccceEEEee---CCcE-EEEecCHHH------HHHHHHHHHHHHHHhh--cCCCceeEeeEeeEEEEecCCeEEEEE
Q 009288 410 PGKSGSFFYLTQ---DDRF-MIKTVKKSE------VKVLIRMLPSYYQHVC--QYKNTLVTKFFGVHCVKPVGGQKTRFI 477 (538)
Q Consensus 410 ~GkSgs~f~~t~---D~rf-iiKti~~~E------~~~l~~~lp~Y~~~~~--~~~~tLL~k~~Gl~~i~~~~~~~~~fv 477 (538)
.|..|.++--.. ++++ .||.|+... ...++++ .-...|. .||| ++++++++...........++
T Consensus 17 ~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~--~~l~~l~~~~Hpn--Iv~~~~~~~~~~~~~~~~~~~ 92 (305)
T d1blxa_ 17 EGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV--AVLRHLETFEHPN--VVRLFDVCTVSRTDRETKLTL 92 (305)
T ss_dssp EETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHH--HHHHHHHHTCCTT--BCCEEEEEEEEECSSEEEEEE
T ss_pred cccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHH--HHHHHHhhcCCCC--cceeeeeecccccccCceEEE
Confidence 366677766542 3565 489985320 1111111 1223443 4554 789999988765555667788
Q ss_pred EEeeec
Q 009288 478 VMGNLF 483 (538)
Q Consensus 478 VM~N~f 483 (538)
||+.+-
T Consensus 93 ~~e~~~ 98 (305)
T d1blxa_ 93 VFEHVD 98 (305)
T ss_dssp EEECCS
T ss_pred EEEecc
Confidence 998764
Done!