BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009292
(538 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 140/496 (28%), Positives = 227/496 (45%), Gaps = 59/496 (11%)
Query: 58 KRGSSSFVKAKPIPGPRGLPVIGNMNLMMSLSHRKIAAAAESCKAKRLMAFSLGDTRVIV 117
K+ SS +K P GP G P+IG+M + H +A + S + ++ +G T V+V
Sbjct: 3 KKTSSKGLKNPP--GPWGWPLIGHMLTLGKNPH--LALSRMSQQYGDVLQIRIGSTPVVV 58
Query: 118 TSNPDVAKEIL--NSSVFADRPVKESAYSLMFN-RAIGFAP-YGVYWRTLRRIAATHLFC 173
S D ++ L F RP ++L+ N +++ F+P G W RR+A L
Sbjct: 59 LSGLDTIRQALVRQGDDFKGRP-DLYTFTLISNGQSMSFSPDSGPVWAARRRLAQNGL-- 115
Query: 174 PKQIKGAEAQRLAIASQMVATFAGYKQGFCVREA------LKR---------------AS 212
+ +IAS ++ + Y + +EA L+ S
Sbjct: 116 ---------KSFSIASDPASSTSCYLEEHVSKEAEVLISTLQELMAGPGHFNPYRYVVVS 166
Query: 213 LNNMMCSV-FGREYKLDSLNDEVKELRALVDEGYEILGILNWTDHLPWLADF-DPQKIRF 270
+ N++C++ FGR Y D + E+ L L + E++G N D +P L +P F
Sbjct: 167 VTNVICAICFGRRY--DHNHQELLSLVNLNNNFGEVVGSGNPADFIPILRYLPNPSLNAF 224
Query: 271 RCSKLAPKVNRFVGRIVAQHKVQSNKQKNLDFVDVL--------LSLQGSDKLSDSDMIA 322
+ L K F+ ++V +H K D D L L + +LSD +I
Sbjct: 225 K--DLNEKFYSFMQKMVKEHYKTFEKGHIRDITDSLIEHCQEKQLDENANVQLSDEKIIN 282
Query: 323 VLWEMIFRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLA 382
++ ++ G DTV I W L LV++ VQ ++ +ELD V+GRSR SD L Y+
Sbjct: 283 IVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYME 342
Query: 383 AVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFI 442
A I E R H + DT++ G+++P+G VN W I+ D +W NP EF+
Sbjct: 343 AFILETFR-HSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFL 401
Query: 443 PERFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQ 502
PERFL +G ++ VL + + FG G+R C G+ + V ++A LL +
Sbjct: 402 PERFLTPDGAID-KVLSEKVII--FGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLG 458
Query: 503 NTVDLSEVLRLSCEMA 518
VD++ + L+ + A
Sbjct: 459 VKVDMTPIYGLTMKHA 474
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 127/454 (27%), Positives = 206/454 (45%), Gaps = 36/454 (7%)
Query: 66 KAKPIPGPRGLPVIGNMNLMMSLSHRKIAAAAESCKAKRLMAFSLGDTRVIVTSNPDVAK 125
K KP PGP P+IGN + +H A A + + LG ++V +
Sbjct: 8 KGKP-PGPFAWPLIGNAAAVGQAAHLSFARLAR--RYGDVFQIRLGSCPIVVLNGERAIH 64
Query: 126 EIL--NSSVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRRIAAT---HLFC--PKQIK 178
+ L S FADRP S + R++ F Y +W+ RR A + + F P+ +
Sbjct: 65 QALVQQGSAFADRPSFASFRVVSGGRSMAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQ 124
Query: 179 GAEAQRLAIASQMVATFA-GYKQG-FCVREALKRASLNNMMCSV-FGREYKLDSLNDEVK 235
E L+ A ++VA G G F L ++ N+M +V FG Y D + E +
Sbjct: 125 VLEGHVLSEARELVALLVRGSADGAFLDPRPLTVVAVANVMSAVCFGCRYSHD--DPEFR 182
Query: 236 ELRALVDEGYEILGILNWTDHLPWLADF-DPQKIRFR-CSKLAPKVNRFVGRIVAQH-KV 292
EL + +E +G + D +PWL F +P + FR +L + F+ +H +
Sbjct: 183 ELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRHCES 242
Query: 293 QSNKQKNLDFVDVLL----------SLQGSDKLSDSDMIAVLWEMIFRGTDTVAVLIEWI 342
D +D + S G +L ++ A + ++ DT++ ++W+
Sbjct: 243 LRPGAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWL 302
Query: 343 LARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSWAR 402
L + DVQ+RV ELD+VVGR R D L Y+ A + E +R P+ +
Sbjct: 303 LLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPV-TIPH 361
Query: 403 LAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERFLPKEGGVEFSVLGSDL 462
+T++ GYH+P+ T VN W+++ DP W NP F P RFL K+G ++ DL
Sbjct: 362 ATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKDG-----LINKDL 416
Query: 463 T--LAPFGSGRRVCPGKNLGLTTVSFWVASLLHE 494
T + F G+R C G+ L + +++ L H+
Sbjct: 417 TSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQ 450
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/439 (24%), Positives = 200/439 (45%), Gaps = 28/439 (6%)
Query: 76 LPVIGNMNLMMSLSHRKIAAAAESCKAKRLMAFSLGDTRVIVTSNPDVAKEIL--NSSVF 133
LP++G++ + H K + + +G ++ + +AKE+L F
Sbjct: 16 LPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDF 75
Query: 134 ADRPVKESAYSLMFNR-AIGFAPYGVYWRTLRRIAATHLFCPK----QIKGAEAQRLAIA 188
+ RP + NR I FA G +W+ RR+A K +++ Q ++
Sbjct: 76 SGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEISTL 135
Query: 189 SQMVATFAGYKQGFCVREALKRASLNNMMCSVFGREYKLDSLNDEVKELRALVDEGYEIL 248
M+AT G + ++ +++C F YK + + E+ ++ + + L
Sbjct: 136 CDMLATHNGQSIDISFPVFVAVTNVISLIC--FNTSYK--NGDPELNVIQNYNEGIIDNL 191
Query: 249 GILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRFVGRIVAQHKVQSNKQKNLDFVDVLLS 308
+ D +PWL F P K + N + +I+ +K + + +D L+
Sbjct: 192 SKDSLVDLVPWLKIF-PNKTLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQ 250
Query: 309 L------------QGSDKLSDSDMIAVLWEMIFRGTDTVAVLIEWILARLVLHCDVQSRV 356
Q S+ LSD+ ++ + ++ G +T +++W LA L+ + V+ ++
Sbjct: 251 AKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKL 310
Query: 357 HDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVP 416
++E+D+ VG SR SD L+ L A I+EVLRL P P+L + A D++I + V
Sbjct: 311 YEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHK-ANVDSSIGEFAVD 369
Query: 417 RGTTAMVNMWAISRDPDVWKNPLEFIPERFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPG 476
+GT ++N+WA+ + W P +F+PERFL G ++ ++ PFG+G R C G
Sbjct: 370 KGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGT---QLISPSVSYLPFGAGPRSCIG 426
Query: 477 KNLGLTTVSFWVASLLHEY 495
+ L + +A LL +
Sbjct: 427 EILARQELFLIMAWLLQRF 445
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 177/407 (43%), Gaps = 29/407 (7%)
Query: 105 LMAFSLGDTRVIVTSNPDVAKEIL--NSSVFADRPVKESAYSLMFNRAIGFAPYGVYWRT 162
+ + LG +V + DV KE L S +FADRP + + + YG W
Sbjct: 50 IFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKMGGLLNSRYGRGWVD 109
Query: 163 LRRIAATHL----FCPKQIKGAEAQRLAIASQMVATFAGYKQGFCVREALKRASLNNMMC 218
RR+A + K + + + + T+ G + F ++ + A N
Sbjct: 110 HRRLAVNSFRYFGYGQKSFESKILEETKFFNDAIETYKG--RPFDFKQLITNAVSNITNL 167
Query: 219 SVFGREYKLDSLNDEVKELRALVDEGYEILGILN--WTDHLPWLA--DFDPQKIRFRCSK 274
+FG + + + + + + L E E+ + + PW+ F + FR +
Sbjct: 168 IIFGERFTYE--DTDFQHMIELFSENVELAASASVFLYNAFPWIGILPFGKHQQLFRNAA 225
Query: 275 LAPKVNRFVGRIVAQHKVQSNKQKNLDFVDVLLSL--QG----SDKLSDSDMIAVLWEMI 328
+ V F+ R++ + V Q FVD L QG S S ++I + E+I
Sbjct: 226 V---VYDFLSRLIEKASVNRKPQLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELI 282
Query: 329 FRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEV 388
GT+T ++ W + + L+ ++Q +V E+D ++G + + D ++ Y AV+ EV
Sbjct: 283 IAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEV 342
Query: 389 LRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERFLP 448
LR PL + + D + GY +P+GTT + N++++ D W++P F PERFL
Sbjct: 343 LRFCNIVPLGIFHATS-EDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLD 401
Query: 449 KEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEY 495
G L PF GRR C G++L + + +LL +
Sbjct: 402 SSG-----YFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRF 443
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 126/482 (26%), Positives = 199/482 (41%), Gaps = 50/482 (10%)
Query: 68 KPIPGPRGLPVIGNMNLMMSLSHRKIAAAAESCKAKRLMAFSLGDTRVIVTSNPDVAKEI 127
K P P G P++G++ + H +A + S + ++ +G T V+V S D ++
Sbjct: 16 KSPPEPWGWPLLGHVLTLGKNPH--LALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQA 73
Query: 128 L--NSSVFADRPVKESAYSLMFNRAIGFAP-YGVYWRTLRRIAATHLFCPKQIKGAEAQR 184
L F RP ++ + +++ F+ G W RR+A L
Sbjct: 74 LVRQGDDFKGRPDLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNAL-----------NT 122
Query: 185 LAIASQMVATFAGYKQGFCVREALKRAS--------------LNNMMCSV--------FG 222
+IAS ++ + Y + +EA S N ++ SV FG
Sbjct: 123 FSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVVVSVANVIGAMCFG 182
Query: 223 REYKLDSLNDEVKELRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
+ + S DE+ L E E N D P L + P R + F
Sbjct: 183 QHFPESS--DEMLSLVKNTHEFVETASSGNPLDFFPILR-YLPNPALQRFKAFNQRFLWF 239
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSL-----QGSDKLSDSDMIAVLWEMIF-RGTDTVA 336
+ + V +H +K D L + S L + I L IF G DTV
Sbjct: 240 LQKTVQEHYQDFDKNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVT 299
Query: 337 VLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGP 396
I W L LV ++Q ++ ELD V+GR R SD +L YL A I E R H
Sbjct: 300 TAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFR-HSSFL 358
Query: 397 LLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERFLPKEGGVEFS 456
+ DTT++G+++P+ VN W ++ DP++W++P EF PERFL +G
Sbjct: 359 PFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAINK 418
Query: 457 VLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSCE 516
L + L FG G+R C G+ L + ++A LL + + VDL+ + L+ +
Sbjct: 419 PLSEKMML--FGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTPIYGLTMK 476
Query: 517 MA 518
A
Sbjct: 477 HA 478
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 177/407 (43%), Gaps = 29/407 (7%)
Query: 105 LMAFSLGDTRVIVTSNPDVAKEIL--NSSVFADRPVKESAYSLMFNRAIGFAPYGVYWRT 162
+ + LG +V + DV KE L S +FADRP + + + YG W
Sbjct: 50 IFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKMGGLLNSRYGRGWVD 109
Query: 163 LRRIAATHL----FCPKQIKGAEAQRLAIASQMVATFAGYKQGFCVREALKRASLNNMMC 218
RR+A + K + + + + T+ G + F ++ + A N
Sbjct: 110 HRRLAVNSFRYFGYGQKSFESKILEETKFFNDAIETYKG--RPFDFKQLITNAVSNITNL 167
Query: 219 SVFGREYKLDSLNDEVKELRALVDEGYEILGILN--WTDHLPWLA--DFDPQKIRFRCSK 274
+FG + + + + + + L E E+ + + PW+ F + FR +
Sbjct: 168 IIFGERFTYE--DTDFQHMIELFSENVELAASASVFLYNAFPWIGILPFGKHQQLFRNAA 225
Query: 275 LAPKVNRFVGRIVAQHKVQSNKQKNLDFVDVLLSL--QG----SDKLSDSDMIAVLWEMI 328
+ V F+ R++ + V Q FVD L QG S S ++I + E+I
Sbjct: 226 V---VYDFLSRLIEKASVNRKPQLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELI 282
Query: 329 FRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEV 388
GT+T ++ W + + L+ ++Q +V E+D ++G + + D ++ Y AV+ EV
Sbjct: 283 IAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEV 342
Query: 389 LRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERFLP 448
LR PL + + D + GY +P+GTT + N++++ D W++P F PERFL
Sbjct: 343 LRFCNIVPLGIFHATS-EDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLD 401
Query: 449 KEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEY 495
G L PF GRR C G++L + + +LL +
Sbjct: 402 SSG-----YFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRF 443
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 120/488 (24%), Positives = 206/488 (42%), Gaps = 70/488 (14%)
Query: 55 YKFKRGSSSFVKAKPIPGPRGLPVIGNMNLMMSLS-HRKIAAAAESCKAK--RLMAFSLG 111
Y + S K IPGP LP +GN+ LS H+ C K ++ F G
Sbjct: 3 YLYGTHSHGLFKKLGIPGPTPLPFLGNI-----LSYHKGFCMFDMECHKKYGKVWGFYDG 57
Query: 112 DTRVIVTSNPDVAKEILNSSVFADRPVKESAYSLMFNRAIGFAPYGVY-----------W 160
V+ ++PD+ K +L VKE YS+ NR F P G W
Sbjct: 58 QQPVLAITDPDMIKTVL---------VKE-CYSVFTNRR-PFGPVGFMKSAISIAEDEEW 106
Query: 161 RTLRRIAATHLFCPKQIKGAEAQRLAIASQMVATF-------AGYKQGFCVREALKRASL 213
+ LR L P G + + I +Q A + +++ S+
Sbjct: 107 KRLRS-----LLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSM 161
Query: 214 NNMMCSVFGREYKLDSLNDE----VKELRALVDEGYEILGILNWTDHLPWLADFDPQKIR 269
+ + + FG +DSLN+ V+ + L+ + L+ T P+L P
Sbjct: 162 DVITSTSFG--VNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITV-FPFLI---PILEV 215
Query: 270 FRCSKLAPKVNRFVGRIVAQHK---VQSNKQKNLDFVDVLLSLQGSDK------LSDSDM 320
+V F+ + V + K ++ ++ +DF+ +++ Q S + LSD ++
Sbjct: 216 LNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLEL 275
Query: 321 IAVLWEMIFRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIY 380
+A IF G +T + ++ +I+ L H DVQ ++ +E+D V+ + ++ Y
Sbjct: 276 VAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEY 335
Query: 381 LAAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLE 440
L V+ E LRL P + R+ D I+G +P+G M+ +A+ RDP W P +
Sbjct: 336 LDMVVNETLRLFPIA--MRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEK 393
Query: 441 FIPERFLPK-EGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLP 499
F+PERF K + ++ + PFGSG R C G L + + +L +++ P
Sbjct: 394 FLPERFSKKNKDNIDPYI------YTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKP 447
Query: 500 SAQNTVDL 507
+ + L
Sbjct: 448 CKETQIPL 455
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/482 (24%), Positives = 204/482 (42%), Gaps = 70/482 (14%)
Query: 61 SSSFVKAKPIPGPRGLPVIGNMNLMMSLS-HRKIAAAAESCKAK--RLMAFSLGDTRVIV 117
S K IPGP LP +GN+ LS H+ C K ++ F G V+
Sbjct: 7 SHGLFKKLGIPGPTPLPFLGNI-----LSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLA 61
Query: 118 TSNPDVAKEILNSSVFADRPVKESAYSLMFNRAIGFAPYGVY-----------WRTLRRI 166
++PD+ K +L VKE YS+ NR F P G W+ LR
Sbjct: 62 ITDPDMIKTVL---------VKE-CYSVFTNRR-PFGPVGFMKSAISIAEDEEWKRLRS- 109
Query: 167 AATHLFCPKQIKGAEAQRLAIASQMVATF-------AGYKQGFCVREALKRASLNNMMCS 219
L P G + + I +Q A + +++ S++ + +
Sbjct: 110 ----LLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITST 165
Query: 220 VFGREYKLDSLNDE----VKELRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKL 275
FG +DSLN+ V+ + L+ + L+ T P+L P
Sbjct: 166 SFG--VNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITV-FPFLI---PILEVLNICVF 219
Query: 276 APKVNRFVGRIVAQHK---VQSNKQKNLDFVDVLLSLQGSDK------LSDSDMIAVLWE 326
+V F+ + V + K ++ ++ +DF+ +++ Q S + LSD +++A
Sbjct: 220 PREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSII 279
Query: 327 MIFRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIK 386
IF G +T + ++ +I+ L H DVQ ++ +E+D V+ + ++ YL V+
Sbjct: 280 FIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVN 339
Query: 387 EVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERF 446
E LRL P + R+ D I+G +P+G M+ +A+ RDP W P +F+PERF
Sbjct: 340 ETLRLFPIA--MRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERF 397
Query: 447 LPK-EGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTV 505
K + ++ + PFGSG R C G L + + +L +++ P + +
Sbjct: 398 SKKNKDNIDPYI------YTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQI 451
Query: 506 DL 507
L
Sbjct: 452 PL 453
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/482 (24%), Positives = 204/482 (42%), Gaps = 70/482 (14%)
Query: 61 SSSFVKAKPIPGPRGLPVIGNMNLMMSLS-HRKIAAAAESCKAK--RLMAFSLGDTRVIV 117
S K IPGP LP +GN+ LS H+ C K ++ F G V+
Sbjct: 8 SHGLFKKLGIPGPTPLPFLGNI-----LSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLA 62
Query: 118 TSNPDVAKEILNSSVFADRPVKESAYSLMFNRAIGFAPYGVY-----------WRTLRRI 166
++PD+ K +L VKE YS+ NR F P G W+ LR
Sbjct: 63 ITDPDMIKTVL---------VKE-CYSVFTNRR-PFGPVGFMKSAISIAEDEEWKRLRS- 110
Query: 167 AATHLFCPKQIKGAEAQRLAIASQMVATF-------AGYKQGFCVREALKRASLNNMMCS 219
L P G + + I +Q A + +++ S++ + +
Sbjct: 111 ----LLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITST 166
Query: 220 VFGREYKLDSLNDE----VKELRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKL 275
FG +DSLN+ V+ + L+ + L+ T P+L P
Sbjct: 167 SFG--VNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITV-FPFLI---PILEVLNICVF 220
Query: 276 APKVNRFVGRIVAQHK---VQSNKQKNLDFVDVLLSLQGSDK------LSDSDMIAVLWE 326
+V F+ + V + K ++ ++ +DF+ +++ Q S + LSD +++A
Sbjct: 221 PREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSII 280
Query: 327 MIFRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIK 386
IF G +T + ++ +I+ L H DVQ ++ +E+D V+ + ++ YL V+
Sbjct: 281 FIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVN 340
Query: 387 EVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERF 446
E LRL P + R+ D I+G +P+G M+ +A+ RDP W P +F+PERF
Sbjct: 341 ETLRLFPIA--MRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERF 398
Query: 447 LPK-EGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTV 505
K + ++ + PFGSG R C G L + + +L +++ P + +
Sbjct: 399 SKKNKDNIDPYI------YTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQI 452
Query: 506 DL 507
L
Sbjct: 453 PL 454
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/462 (24%), Positives = 198/462 (42%), Gaps = 33/462 (7%)
Query: 66 KAKPIPGPRGLPVIGNMNLMMSLSHRKIAAAAESCKAKRLMAFSL--GDTRVIVTSNPDV 123
K K PGP LP+IGN+ L + I + + F+L G R++V
Sbjct: 8 KGKLPPGPFPLPIIGNL---FQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKA 64
Query: 124 AKEIL-----NSSVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQIK 178
KE L S D P A+ +R I F G W+ +RR + T L K
Sbjct: 65 VKEALLDYKDEFSGRGDLP----AFHAHRDRGIIFN-NGPTWKDIRRFSLTTLRNYGMGK 119
Query: 179 GAEAQRLAIASQMVATFAGYKQGFCVREA-LKRASLNNMMCSVFGREYKLDSLNDEVKEL 237
R+ + + QG L + N++ + R++ D +++ L
Sbjct: 120 QGNESRIQREAHFLLEALRKTQGQPFDPTFLIGCAPCNVIADILFRKH-FDYNDEKFLRL 178
Query: 238 RALVDEGYEILGI--LNWTDHLPWLADFDPQKIRFRCSKLAPKVNRFVGRIVAQHKVQSN 295
L +E + +L L ++ P + P R + K +V +V V +H +
Sbjct: 179 MYLFNENFHLLSTPWLQLYNNFPSFLHYLPGSHR-KVIKNVAEVKEYVSERVKEHHQSLD 237
Query: 296 KQKNLDFVDVLL-----SLQGSDKLSDSDMIAV-LWEMIFRGTDTVAVLIEWILARLVLH 349
D D LL +++L D I V + ++ F GT+T + + + L L+ +
Sbjct: 238 PNCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKY 297
Query: 350 CDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSWARLAITDTT 409
+++ ++H+E+D+V+G SR A D E+ Y+ AV+ E+ R P + A DT
Sbjct: 298 PEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVP-SNLPHEATRDTI 356
Query: 410 IDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERFLPKEGGVEFSVLGSDLTLAPFGS 469
GY +P+GT + + ++ D + +P +F PE FL + G ++S PF +
Sbjct: 357 FRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDY-----FKPFST 411
Query: 470 GRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQ-NTVDLSEV 510
G+RVC G+ L + + ++L + P +DLS +
Sbjct: 412 GKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDLSPI 453
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 116/474 (24%), Positives = 210/474 (44%), Gaps = 64/474 (13%)
Query: 66 KAKPIPGPRGLPVIGNMNLMMSLSHRKIAAAAESCKAKRLMAFSLGDTRVIVTSNPDVAK 125
K K PGP LP IGN L ++ + S + + LG RV+V D +
Sbjct: 8 KGKLPPGPTPLPFIGNY-LQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVR 66
Query: 126 EIL--NSSVFADRPVKES------AYSLMFNRAIGFAPYGVYWRTLRR--IAATHLFCPK 175
E L + F+ R + + Y ++F+ G + LRR IA F
Sbjct: 67 EALVDQAEEFSGRGEQATFDWVFKGYGVVFSN-------GERAKQLRRFSIATLRDFGVG 119
Query: 176 QIKGAEAQRLAIASQMVATFAGYKQGFCVREALKRASLNNMMCS-VFGREYKLDSLNDEV 234
+ +G E + A ++ G +++N++ S VFG D + +
Sbjct: 120 K-RGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFG-----DRFDYKD 173
Query: 235 KELRALVDEGYEILGILNWTD---------------HLPWLADFDPQKIRFRCSKLAPKV 279
KE +L+ +LGI +T HLP PQ+ F+C + +
Sbjct: 174 KEFLSLLRM---MLGIFQFTSTSTGQLYEMFSSVMKHLPG-----PQQQAFQCLQ---GL 222
Query: 280 NRFVGRIVAQHKVQSNKQKNLDFVD-VLLSLQGSDKLSDSD-----MIAVLWEMIFRGTD 333
F+ + V ++ + DF+D L+ +Q +K +++ ++ ++ GT+
Sbjct: 223 EDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTE 282
Query: 334 TVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHP 393
TV+ + + L+ H +V+++VH+E+D+V+G++R D ++ Y+ AVI E+ R
Sbjct: 283 TVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGD 342
Query: 394 PGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERFLPKEGGV 453
P +S AR DT + +P+GT + ++ RDP + NP +F P+ FL ++G
Sbjct: 343 VIP-MSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQF 401
Query: 454 EFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDL 507
+ SD PF G+R C G+ L + + +++ + L S+Q+ D+
Sbjct: 402 K----KSD-AFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFR-LKSSQSPKDI 449
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 115/476 (24%), Positives = 201/476 (42%), Gaps = 64/476 (13%)
Query: 66 KAKPIPGPRGLPVIGNMNLMMSLSHRKIAAAAESCKAKRLMAFSLGDTRVIVTSNPDVAK 125
K K PGP LP IGN L ++ + S + + LG RV+V D K
Sbjct: 8 KGKLPPGPTPLPFIGNY-LQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVK 66
Query: 126 EIL--NSSVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQIKGAEAQ 183
E L + F+ R +++ + +F YGV + R F ++G
Sbjct: 67 EALVDQAEEFSGR-GEQATFDWLFKG------YGVAFSNGERAKQLRRFSIATLRGFGVG 119
Query: 184 RLAIASQMVATFAGY-------KQGFCVREA--LKRASLNNMMCSVFGREYKLDSLNDEV 234
+ I ++ AG+ G + L R N + VFG D + E
Sbjct: 120 KRGIEERIQEE-AGFLIDALRGTHGANIDPTFFLSRTVSNVISSIVFG-----DRFDYED 173
Query: 235 KELRALVDEGYEILGILNWT---------------DHLPWLADFDPQKIRFRCSKLAPKV 279
KE +L+ +LG +T HLP PQ+ F K +
Sbjct: 174 KEFLSLLRM---MLGSFQFTATSTGQLYEMFSSVMKHLPG-----PQQQAF---KELQGL 222
Query: 280 NRFVGRIVAQHKVQSNKQKNLDFVD-VLLSLQGSDKLSDSD-----MIAVLWEMIFRGTD 333
F+ + V ++ + DF+D L+ +Q +K +++ ++ + F GT+
Sbjct: 223 EDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTE 282
Query: 334 TVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHP 393
TV+ + + L+ H +V+++VH+E+D+V+G++R D ++ Y AVI E+ R
Sbjct: 283 TVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYTEAVIHEIQRFGD 342
Query: 394 PGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERFLPKEGGV 453
P + A DT + +P+GT + ++ RDP + NP +F P+ FL K+G
Sbjct: 343 MLP-MGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLDKKGQF 401
Query: 454 EFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWL-PSAQNTVDLS 508
+ SD PF G+R C G+ L + + +++ + + P + +D+S
Sbjct: 402 K----KSD-AFVPFSIGKRYCFGEGLARMELFLFFTTIMQNFRFKSPQSPKDIDVS 452
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 169/393 (43%), Gaps = 43/393 (10%)
Query: 134 ADRPVKESAYSLMF---NRAIGFAPYGVYWRTLRRIAATHLFCPKQI----KGAEAQRLA 186
ADRP L F ++ + A YG WR RR + + L + + K E
Sbjct: 77 ADRPPVPITQILGFGPRSQGVFLARYGPAWREQRRFSVSTL---RNLGLGKKSLEQWVTE 133
Query: 187 IASQMVATFAGYK-QGFCVREALKRASLNNMMCSVFGREYKLDSLNDEVKELRALVDEGY 245
A+ + A FA + + F L +A N + GR ++ D + L L EG
Sbjct: 134 EAACLCAAFANHSGRPFRPNGLLDKAVSNVIASLTCGRRFEYD--DPRFLRLLDLAQEGL 191
Query: 246 --------EILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRFVGRIVAQHKVQ-SNK 296
E+L + H+P LA + +RF+ + L + ++ +H++
Sbjct: 192 KEESGFLREVLNAVPVDRHIPALAG---KVLRFQKAFLTQ-----LDELLTEHRMTWDPA 243
Query: 297 QKNLDFVDVLLSLQGSDK------LSDSDMIAVLWEMIFRGTDTVAVLIEWILARLVLHC 350
Q D + L+ K +D ++ V+ ++ G T + + W L ++LH
Sbjct: 244 QPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHP 303
Query: 351 DVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSWARLAITDTTI 410
DVQ RV E+D V+G+ R D + Y AVI EV R P L + D +
Sbjct: 304 DVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVP-LGMTHMTSRDIEV 362
Query: 411 DGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERFLPKEGGVEFSVLGSDLTLAPFGSG 470
G+ +P+GTT + N+ ++ +D VW+ P F PE FL +G PF +G
Sbjct: 363 QGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGH-----FVKPEAFLPFSAG 417
Query: 471 RRVCPGKNLGLTTVSFWVASLLHEYAW-LPSAQ 502
RR C G+ L + + SLL +++ +P+ Q
Sbjct: 418 RRACLGEPLARMELFLFFTSLLQHFSFSVPTGQ 450
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 116/474 (24%), Positives = 209/474 (44%), Gaps = 64/474 (13%)
Query: 66 KAKPIPGPRGLPVIGNMNLMMSLSHRKIAAAAESCKAKRLMAFSLGDTRVIVTSNPDVAK 125
K K PGP LP IGN L ++ + S + + LG RV+V D +
Sbjct: 8 KGKLPPGPTPLPFIGNY-LQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVR 66
Query: 126 EIL--NSSVFADRPVKES------AYSLMFNRAIGFAPYGVYWRTLRR--IAATHLFCPK 175
E L + F+ R + + Y ++F+ G + LRR IA F
Sbjct: 67 EALVDQAEEFSGRGEQATFDWVFKGYGVVFSN-------GERAKQLRRFSIATLRDFGVG 119
Query: 176 QIKGAEAQRLAIASQMVATFAGYKQGFCVREALKRASLNNMMCS-VFGREYKLDSLNDEV 234
+ +G E + A ++ G +++N++ S VFG D + +
Sbjct: 120 K-RGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFG-----DRFDYKD 173
Query: 235 KELRALVDEGYEILGILNWTD---------------HLPWLADFDPQKIRFRCSKLAPKV 279
KE +L+ +LGI +T HLP PQ+ F +L +
Sbjct: 174 KEFLSLLRM---MLGIFQFTSTSTGQLYEMFSSVMKHLPG-----PQQQAF---QLLQGL 222
Query: 280 NRFVGRIVAQHKVQSNKQKNLDFVD-VLLSLQGSDKLSDSD-----MIAVLWEMIFRGTD 333
F+ + V ++ + DF+D L+ +Q +K +++ ++ ++ GT+
Sbjct: 223 EDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTE 282
Query: 334 TVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHP 393
TV+ + + L+ H +V+++VH+E+D+V+G++R D ++ Y+ AVI E+ R
Sbjct: 283 TVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGD 342
Query: 394 PGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERFLPKEGGV 453
P +S AR DT + +P+GT + ++ RDP + NP +F P+ FL ++G
Sbjct: 343 VIP-MSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQF 401
Query: 454 EFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDL 507
+ SD PF G+R C G+ L + + +++ + L S+Q+ D+
Sbjct: 402 K----KSD-AFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFR-LKSSQSPKDI 449
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 116/474 (24%), Positives = 209/474 (44%), Gaps = 64/474 (13%)
Query: 66 KAKPIPGPRGLPVIGNMNLMMSLSHRKIAAAAESCKAKRLMAFSLGDTRVIVTSNPDVAK 125
K K PGP LP IGN L ++ + S + + LG RV+V D +
Sbjct: 8 KGKLPPGPTPLPFIGNY-LQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVR 66
Query: 126 EIL--NSSVFADRPVKES------AYSLMFNRAIGFAPYGVYWRTLRR--IAATHLFCPK 175
E L + F+ R + + Y ++F+ G + LRR IA F
Sbjct: 67 EALVDQAEEFSGRGEQATFDWVFKGYGVVFSN-------GERAKQLRRFSIATLRDFGVG 119
Query: 176 QIKGAEAQRLAIASQMVATFAGYKQGFCVREALKRASLNNMMCS-VFGREYKLDSLNDEV 234
+ +G E + A ++ G +++N++ S VFG D + +
Sbjct: 120 K-RGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFG-----DRFDYKD 173
Query: 235 KELRALVDEGYEILGILNWTD---------------HLPWLADFDPQKIRFRCSKLAPKV 279
KE +L+ +LGI +T HLP PQ+ F +L +
Sbjct: 174 KEFLSLLRM---MLGIFQFTSTSTGQLYEMFSSVMKHLPG-----PQQQAF---QLLQGL 222
Query: 280 NRFVGRIVAQHKVQSNKQKNLDFVD-VLLSLQGSDKLSDSD-----MIAVLWEMIFRGTD 333
F+ + V ++ + DF+D L+ +Q +K +++ ++ ++ GT+
Sbjct: 223 EDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFVGGTE 282
Query: 334 TVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHP 393
TV+ + + L+ H +V+++VH+E+D+V+G++R D ++ Y+ AVI E+ R
Sbjct: 283 TVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGD 342
Query: 394 PGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERFLPKEGGV 453
P +S AR DT + +P+GT + ++ RDP + NP +F P+ FL ++G
Sbjct: 343 VIP-MSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQF 401
Query: 454 EFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDL 507
+ SD PF G+R C G+ L + + +++ + L S+Q+ D+
Sbjct: 402 K----KSD-AFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFR-LKSSQSPKDI 449
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 116/474 (24%), Positives = 208/474 (43%), Gaps = 64/474 (13%)
Query: 66 KAKPIPGPRGLPVIGNMNLMMSLSHRKIAAAAESCKAKRLMAFSLGDTRVIVTSNPDVAK 125
K K PGP LP IGN L ++ + S + + LG RV+V D +
Sbjct: 8 KGKLPPGPTPLPFIGNY-LQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVR 66
Query: 126 EIL--NSSVFADRPVKES------AYSLMFNRAIGFAPYGVYWRTLRR--IAATHLFCPK 175
E L + F+ R + + Y ++F+ G + LRR IA F
Sbjct: 67 EALVDQAEEFSGRGEQATFDWVFKGYGVVFSN-------GERAKQLRRFSIATLRDFGVG 119
Query: 176 QIKGAEAQRLAIASQMVATFAGYKQGFCVREALKRASLNNMMCS-VFGREYKLDSLNDEV 234
+ +G E + A ++ G +++N++ S VFG D + +
Sbjct: 120 K-RGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFG-----DRFDYKD 173
Query: 235 KELRALVDEGYEILGILNWTD---------------HLPWLADFDPQKIRFRCSKLAPKV 279
KE +L+ +LGI +T HLP PQ+ F +L +
Sbjct: 174 KEFLSLLRM---MLGIFQFTSTSTGQLYEMFSSVMKHLPG-----PQQQAF---QLLQGL 222
Query: 280 NRFVGRIVAQHKVQSNKQKNLDFVD-VLLSLQGSDKLSDSD-----MIAVLWEMIFRGTD 333
F+ + V ++ + DF+D L+ +Q +K +++ ++ + GT+
Sbjct: 223 EDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTE 282
Query: 334 TVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHP 393
TV+ + + L+ H +V+++VH+E+D+V+G++R D ++ Y+ AVI E+ R
Sbjct: 283 TVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGD 342
Query: 394 PGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERFLPKEGGV 453
P +S AR DT + +P+GT + ++ RDP + NP +F P+ FL ++G
Sbjct: 343 VIP-MSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQF 401
Query: 454 EFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDL 507
+ SD PF G+R C G+ L + + +++ + L S+Q+ D+
Sbjct: 402 K----KSD-AFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFR-LKSSQSPKDI 449
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 169/393 (43%), Gaps = 43/393 (10%)
Query: 134 ADRPVKESAYSLMF---NRAIGFAPYGVYWRTLRRIAATHLFCPKQI----KGAEAQRLA 186
ADRP L F ++ + A YG WR RR + + L + + K E
Sbjct: 77 ADRPPVPITQILGFGPRSQGVFLARYGPAWREQRRFSVSTL---RNLGLGKKSLEQWVTE 133
Query: 187 IASQMVATFAGYK-QGFCVREALKRASLNNMMCSVFGREYKLDSLNDEVKELRALVDEGY 245
A+ + A FA + + F L +A N + GR ++ D + L L EG
Sbjct: 134 EAACLCAAFANHSGRPFRPNGLLDKAVSNVIASLTCGRRFEYD--DPRFLRLLDLAQEGL 191
Query: 246 --------EILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRFVGRIVAQHKVQ-SNK 296
E+L + H+P LA + +RF+ + L + ++ +H++
Sbjct: 192 KEESGFLREVLNAVPVLLHIPALAG---KVLRFQKAFLTQ-----LDELLTEHRMTWDPA 243
Query: 297 QKNLDFVDVLLSLQGSDK------LSDSDMIAVLWEMIFRGTDTVAVLIEWILARLVLHC 350
Q D + L+ K +D ++ V+ ++ G T + + W L ++LH
Sbjct: 244 QPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHP 303
Query: 351 DVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSWARLAITDTTI 410
DVQ RV E+D V+G+ R D + Y AVI EV R P L + D +
Sbjct: 304 DVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVP-LGVTHMTSRDIEV 362
Query: 411 DGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERFLPKEGGVEFSVLGSDLTLAPFGSG 470
G+ +P+GTT + N+ ++ +D VW+ P F PE FL +G PF +G
Sbjct: 363 QGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGH-----FVKPEAFLPFSAG 417
Query: 471 RRVCPGKNLGLTTVSFWVASLLHEYAW-LPSAQ 502
RR C G+ L + + SLL +++ +P+ Q
Sbjct: 418 RRACLGEPLARMELFLFFTSLLQHFSFSVPTGQ 450
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 115/474 (24%), Positives = 207/474 (43%), Gaps = 64/474 (13%)
Query: 66 KAKPIPGPRGLPVIGNMNLMMSLSHRKIAAAAESCKAKRLMAFSLGDTRVIVTSNPDVAK 125
K K PGP LP IGN L ++ + S + + LG RV+V D +
Sbjct: 8 KGKLPPGPTPLPFIGNY-LQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVR 66
Query: 126 EIL--NSSVFADRPVKES------AYSLMFNRAIGFAPYGVYWRTLRR--IAATHLFCPK 175
E L + F+ R + + Y ++F+ G + LRR IA F
Sbjct: 67 EALVDQAEEFSGRGEQATFDWVFKGYGVVFSN-------GERAKQLRRFSIATLRDFGVG 119
Query: 176 QIKGAEAQRLAIASQMVATFAGYKQGFCVREALKRASLNNMMCS-VFGREYKLDSLNDEV 234
+ +G E + A ++ G +++N++ S VFG D + +
Sbjct: 120 K-RGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFG-----DRFDYKD 173
Query: 235 KELRALVDEGYEILGILNWTD---------------HLPWLADFDPQKIRFRCSKLAPKV 279
KE +L+ +LG +T HLP PQ+ F +L +
Sbjct: 174 KEFLSLLRM---MLGSFQFTSTSTGQLYEMFSSVMKHLPG-----PQQQAF---QLLQGL 222
Query: 280 NRFVGRIVAQHKVQSNKQKNLDFVD-VLLSLQGSDKLSDSD-----MIAVLWEMIFRGTD 333
F+ + V ++ + DF+D L+ +Q +K +++ ++ + F GT+
Sbjct: 223 EDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTE 282
Query: 334 TVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHP 393
TV+ + + L+ H +V+++VH+E+D+V+G++R D ++ Y+ AVI E+ R
Sbjct: 283 TVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGD 342
Query: 394 PGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERFLPKEGGV 453
P + AR DT + +P+GT + ++ RDP + NP +F P+ FL ++G
Sbjct: 343 VIP-MGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQF 401
Query: 454 EFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDL 507
+ SD PF G+R C G+ L + + +++ + L S+Q+ D+
Sbjct: 402 K----KSD-AFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFR-LKSSQSPKDI 449
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 189/447 (42%), Gaps = 33/447 (7%)
Query: 66 KAKPIPGPRGLPVIGNMNLMMSLSHRKIAAAAESCKAKRLMAFSL--GDTRVIVTSNPDV 123
K K PGP LP+IGNM + + + I + + F++ G ++V +
Sbjct: 8 KGKLPPGPTPLPIIGNM---LQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHGYEA 64
Query: 124 AKEIL--NSSVFADRPVKESAYSLMFNRAIGF-APYGVYWRTLRRIAATHLFCPKQIKGA 180
KE L N F+ R S S + +G + G W+ +RR + T L K +
Sbjct: 65 VKEALIDNGEEFSGR--GNSPISQRITKGLGIISSNGKRWKEIRRFSLTTLRNFGMGKRS 122
Query: 181 EAQRLAIASQ-MVATFAGYKQGFCVREALKRASLNNMMCSVFGREYKLDSLNDEVKELRA 239
R+ + +V K C + + N++CSV ++ + D + L
Sbjct: 123 IEDRVQEEAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQK-RFDYKDQNFLTLMK 181
Query: 240 LVDEGYEILGI--LNWTDHLPWLADFDPQKIRFRCSKLAPKVNRFVGRIVAQHKVQSNKQ 297
+E + IL + ++ P L D P + K ++ V +H+ +
Sbjct: 182 RFNENFRILNSPWIQVCNNFPLLIDCFP-GTHNKVLKNVALTRSYIREKVKEHQASLDVN 240
Query: 298 KNLDFVDVLLSLQGSDK------LSDSDMIAVLWEMIFRGTDTVAVLIEWILARLVLHCD 351
DF+D L +K + +++ + ++ GT+T + + + L L+ H +
Sbjct: 241 NPRDFIDCFLIKMEQEKDNQKSEFNIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHPE 300
Query: 352 VQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLR---LHPPGPLLSWARLAITDT 408
V ++V +E+D V+GR R+ D + Y AV+ E+ R L P G TDT
Sbjct: 301 VTAKVQEEIDHVIGRHRSPCMQDRSHMPYTDAVVHEIQRYSDLVPTG----VPHAVTTDT 356
Query: 409 TIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERFLPKEGGVEFSVLGSDLTLAPFG 468
Y +P+GTT M + ++ D + NP F P FL K G + SD PF
Sbjct: 357 KFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFK----KSDY-FMPFS 411
Query: 469 SGRRVCPGKNLGLTTVSFWVASLLHEY 495
+G+R+C G+ L + ++ ++L +
Sbjct: 412 AGKRICAGEGLARMELFLFLTTILQNF 438
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/467 (23%), Positives = 193/467 (41%), Gaps = 46/467 (9%)
Query: 66 KAKPIPGPRGLPVIGNMNLMMSLSHRKIAAAAESCKAKRLMAFS--LGDTRVIVTSNPDV 123
K K PGP LPV+GN+ + + + + + + K F+ LG V+V D
Sbjct: 8 KGKLPPGPSPLPVLGNL---LQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDA 64
Query: 124 AKEIL--NSSVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQIKGAE 181
+E L + F+ R + + FA G WR LRR + + K +
Sbjct: 65 IREALVDQAEAFSGRGKIAVVDPIFQGYGVIFA-NGERWRALRRFSLATMRDFGMGKRSV 123
Query: 182 AQRLAIASQ-MVATFAGYKQGFCVREALKRASLNNMMCS-VFGR--EYK-------LDSL 230
+R+ ++ +V K L + +N++CS VFG+ +YK LD
Sbjct: 124 EERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLF 183
Query: 231 NDEVKELRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRFVGRIVAQH 290
+ + + +E+ + H P + + ++N F+G+ V +H
Sbjct: 184 FQSFSLISSFSSQVFELFS--GFLKHFPGTHR--------QIYRNLQEINTFIGQSVEKH 233
Query: 291 KVQSNKQKNLDFVDVLLSLQGSDKLSDS------DMIAVLWEMIFRGTDTVAVLIEWILA 344
+ + DF+DV L DK S ++I + + F GT+T + + +
Sbjct: 234 RATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFL 293
Query: 345 RLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSWA--R 402
++ + V RV E+++V+G R A D ++ Y AVI E+ RL G L+ +
Sbjct: 294 LMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRL---GDLIPFGVPH 350
Query: 403 LAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERFLPKEGGVEFSVLGSDL 462
DT GY +P+ T + + DP ++ P F P FL G L +
Sbjct: 351 TVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGA-----LKRNE 405
Query: 463 TLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWL-PSAQNTVDLS 508
PF G+R+C G+ + T + + ++L ++ P +DL+
Sbjct: 406 GFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLT 452
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 111/468 (23%), Positives = 195/468 (41%), Gaps = 48/468 (10%)
Query: 66 KAKPIPGPRGLPVIGNMNLMMSLSHRKIAAAAESCKAKRLMAFS--LGDTRVIVTSNPDV 123
K K PGP LPV+GN+ + + + + + + K F+ LG V+V D
Sbjct: 8 KGKLPPGPSPLPVLGNL---LQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDA 64
Query: 124 AKEIL--NSSVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQIKGAE 181
+E L + F+ R + + FA G WR LRR + + K +
Sbjct: 65 IREALVDQAEAFSGRGKIAVVDPIFQGYGVIFA-NGERWRALRRFSLATMRDFGMGKRSV 123
Query: 182 AQRLAIASQ-MVATFAGYKQGFCVREALKRASLNNMMCS-VFGR--EYK-------LDSL 230
+R+ ++ +V K L + +N++CS VFG+ +YK LD
Sbjct: 124 EERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLF 183
Query: 231 NDEVKELRALVDEGYEIL-GILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRFVGRIVAQ 289
+ + + +E+ G L + P R + + ++N F+G+ V +
Sbjct: 184 FQSFSLISSFSSQVFELFSGFLKYF----------PGTHR-QIYRNLQEINTFIGQSVEK 232
Query: 290 HKVQSNKQKNLDFVDVLLSLQGSDKLSDS------DMIAVLWEMIFRGTDTVAVLIEWIL 343
H+ + DF+DV L DK S ++I + + F GT+T + + +
Sbjct: 233 HRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGF 292
Query: 344 ARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSWA-- 401
++ + V RV E+++V+G R A D ++ Y AVI E+ RL G L+ +
Sbjct: 293 LLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRL---GDLIPFGVP 349
Query: 402 RLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERFLPKEGGVEFSVLGSD 461
DT GY +P+ T + + DP ++ P F P FL G L +
Sbjct: 350 HTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGA-----LKRN 404
Query: 462 LTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWL-PSAQNTVDLS 508
PF G+R+C G+ + T + + ++L ++ P +DL+
Sbjct: 405 EGFMPFSLGKRICAGEGIARTELFLFFTTILQNFSIASPVPPEDIDLT 452
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 111/468 (23%), Positives = 195/468 (41%), Gaps = 48/468 (10%)
Query: 66 KAKPIPGPRGLPVIGNMNLMMSLSHRKIAAAAESCKAKRLMAFS--LGDTRVIVTSNPDV 123
K K PGP LPV+GN+ + + + + + + K F+ LG V+V D
Sbjct: 8 KGKLPPGPSPLPVLGNL---LQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDA 64
Query: 124 AKEIL--NSSVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQIKGAE 181
+E L + F+ R + + FA G WR LRR + + K +
Sbjct: 65 IREALVDQAEAFSGRGKIAVVDPIFQGYGVIFA-NGERWRALRRFSLATMRDFGMGKRSV 123
Query: 182 AQRLAIASQ-MVATFAGYKQGFCVREALKRASLNNMMCS-VFGR--EYK-------LDSL 230
+R+ ++ +V K L + +N++CS VFG+ +YK LD
Sbjct: 124 EERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLF 183
Query: 231 NDEVKELRALVDEGYEIL-GILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRFVGRIVAQ 289
+ + + +E+ G L + P R + + ++N F+G+ V +
Sbjct: 184 FQSFSLISSFSSQVFELFSGFLKYF----------PGTHR-QIYRNLQEINTFIGQSVEK 232
Query: 290 HKVQSNKQKNLDFVDVLLSLQGSDKLSDS------DMIAVLWEMIFRGTDTVAVLIEWIL 343
H+ + DF+DV L DK S ++I + + F GT+T + + +
Sbjct: 233 HRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGF 292
Query: 344 ARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSWA-- 401
++ + V RV E+++V+G R A D ++ Y AVI E+ RL G L+ +
Sbjct: 293 LLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRL---GDLIPFGVP 349
Query: 402 RLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERFLPKEGGVEFSVLGSD 461
DT GY +P+ T + + DP ++ P F P FL G L +
Sbjct: 350 HTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGA-----LKRN 404
Query: 462 LTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWL-PSAQNTVDLS 508
PF G+R+C G+ + T + + ++L ++ P +DL+
Sbjct: 405 EGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLT 452
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 111/468 (23%), Positives = 195/468 (41%), Gaps = 48/468 (10%)
Query: 66 KAKPIPGPRGLPVIGNMNLMMSLSHRKIAAAAESCKAKRLMAFS--LGDTRVIVTSNPDV 123
K K PGP LPV+GN+ + + + + + + K F+ LG V+V D
Sbjct: 8 KGKLPPGPSPLPVLGNL---LQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDA 64
Query: 124 AKEIL--NSSVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQIKGAE 181
+E L + F+ R + + FA G WR LRR + + K +
Sbjct: 65 IREALVDQAEAFSGRGKIAVVDPIFQGYGVIFA-NGERWRALRRFSLATMRDFGMGKRSV 123
Query: 182 AQRLAIASQ-MVATFAGYKQGFCVREALKRASLNNMMCS-VFGR--EYK-------LDSL 230
+R+ ++ +V K L + +N++CS VFG+ +YK LD
Sbjct: 124 EERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLF 183
Query: 231 NDEVKELRALVDEGYEIL-GILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRFVGRIVAQ 289
+ + + +E+ G L + P R + + ++N F+G+ V +
Sbjct: 184 FQSFSLISSFSSQVFELFSGFLKYF----------PGTHR-QIYRNLQEINTFIGQSVEK 232
Query: 290 HKVQSNKQKNLDFVDVLLSLQGSDKLSDS------DMIAVLWEMIFRGTDTVAVLIEWIL 343
H+ + DF+DV L DK S ++I + + F GT+T + + +
Sbjct: 233 HRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGF 292
Query: 344 ARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSWA-- 401
++ + V RV E+++V+G R A D ++ Y AVI E+ RL G L+ +
Sbjct: 293 LLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRL---GDLIPFGVP 349
Query: 402 RLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERFLPKEGGVEFSVLGSD 461
DT GY +P+ T + + DP ++ P F P FL G L +
Sbjct: 350 HTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGA-----LKRN 404
Query: 462 LTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWL-PSAQNTVDLS 508
PF G+R+C G+ + T + + ++L ++ P +DL+
Sbjct: 405 EGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLT 452
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 109/443 (24%), Positives = 191/443 (43%), Gaps = 28/443 (6%)
Query: 66 KAKPIPGPRGLPVIGNMNLMMSLSHRKIAAAAESCKAKRLMAFSLGDTRVIVTSNPDVAK 125
K K PGP P+IGN+ + + K C + LG +V + K
Sbjct: 8 KGKLPPGPTPFPIIGNILQIDAKDISKSLTKFSECYGPVFTVY-LGMKPTVVLHGYEAVK 66
Query: 126 EILNS--SVFADR---PVKESAYSLMFNRAIGFA-PYGVYWRTLRRIAATHLFCPKQIKG 179
E L FA R P+ E ++ +G A W+ +RR + L K
Sbjct: 67 EALVDLGEEFAGRGSVPILEKV-----SKGLGIAFSNAKTWKEMRRFSLMTLRNFGMGKR 121
Query: 180 AEAQRLAIASQ-MVATFAGYKQGFCVREALKRASLNNMMCSVFGREYKLDSLNDEVKELR 238
+ R+ ++ +V C + + N++CSV + D ++E +L
Sbjct: 122 SIEDRIQEEARCLVEELRKTNASPCDPTFILGCAPCNVICSVIFHN-RFDYKDEEFLKLM 180
Query: 239 ALVDEGYEILGI--LNWTDHLPWLADFDPQKIRFRCSKLAPKVNRFVGRIVAQHKVQSNK 296
+ E E+LG L ++ P L D+ P I K A + F+ V +H+ +
Sbjct: 181 ESLHENVELLGTPWLQVYNNFPALLDYFP-GIHKTLLKNADYIKNFIMEKVKEHQKLLDV 239
Query: 297 QKNLDFVDV-LLSLQGSDKLS---DSDMIAVLWEMIFRGTDTVAVLIEWILARLVLHCDV 352
DF+D L+ ++ + L +S +IAV ++ GT+T + + + L L+ H +V
Sbjct: 240 NNPRDFIDCFLIKMEQENNLEFTLESLVIAV-SDLFGAGTETTSTTLRYSLLLLLKHPEV 298
Query: 353 QSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSWARLAITDTTIDG 412
+RV +E+++V+GR R+ D + Y AVI E+ R P + D
Sbjct: 299 AARVQEEIERVIGRHRSPCMQDRSRMPYTDAVIHEIQRFIDLLP-TNLPHAVTRDVRFRN 357
Query: 413 YHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERFLPKEGGVEFSVLGSDLTLAPFGSGRR 472
Y +P+GT + ++ ++ D + NP F P FL + G + SD + PF +G+R
Sbjct: 358 YFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNFK----KSDYFM-PFSAGKR 412
Query: 473 VCPGKNLGLTTVSFWVASLLHEY 495
+C G+ L + ++ S+L +
Sbjct: 413 MCVGEGLARMELFLFLTSILQNF 435
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/468 (23%), Positives = 194/468 (41%), Gaps = 48/468 (10%)
Query: 66 KAKPIPGPRGLPVIGNMNLMMSLSHRKIAAAAESCKAKRLMAFS--LGDTRVIVTSNPDV 123
K K PGP LPV+GN+ + + + + + + K F+ LG V+V D
Sbjct: 8 KGKLPPGPSPLPVLGNL---LQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDA 64
Query: 124 AKEIL--NSSVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQIKGAE 181
+E L + F+ R + + FA G WR LRR + + K +
Sbjct: 65 IREALVDQAEAFSGRGKIAVVDPIFQGYGVIFA-NGERWRALRRFSLATMRDFGMGKRSV 123
Query: 182 AQRLAIASQ-MVATFAGYKQGFCVREALKRASLNNMMCS-VFGR--EYK-------LDSL 230
+R+ ++ +V K L + +N++CS VFG+ +YK LD
Sbjct: 124 EERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLF 183
Query: 231 NDEVKELRALVDEGYEIL-GILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRFVGRIVAQ 289
+ + + +E+ G L + P R + + ++N F+G+ V +
Sbjct: 184 FQSFSLISSFSSQVFELFSGFLKYF----------PGTHR-QIYRNLQEINTFIGQSVEK 232
Query: 290 HKVQSNKQKNLDFVDVLLSLQGSDKLSDS------DMIAVLWEMIFRGTDTVAVLIEWIL 343
H+ + DF+DV L DK S ++I + + GT+T + + +
Sbjct: 233 HRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFAAGTETTSTTLRYGF 292
Query: 344 ARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSWA-- 401
++ + V RV E+++V+G R A D ++ Y AVI E+ RL G L+ +
Sbjct: 293 LLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRL---GDLIPFGVP 349
Query: 402 RLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERFLPKEGGVEFSVLGSD 461
DT GY +P+ T + + DP ++ P F P FL G L +
Sbjct: 350 HTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGA-----LKRN 404
Query: 462 LTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWL-PSAQNTVDLS 508
PF G+R+C G+ + T + + ++L ++ P +DL+
Sbjct: 405 EGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLT 452
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/455 (23%), Positives = 198/455 (43%), Gaps = 35/455 (7%)
Query: 58 KRGSSSFVKAKPIPGPRGLPVIGNMNLMMSLSHRKIAAAAESCKAKRLMAFSL--GDTRV 115
K+ SS + K PGP LPVIGN+ + + + ++ + + F+L G R+
Sbjct: 3 KKTSSG--RGKLPPGPTPLPVIGNI---LQIDIKDVSKSLTNLSKIYGPVFTLYFGLERM 57
Query: 116 IVTSNPDVAKEILNS--SVFADR---PVKESAYSLMFNRAIGFA-PYGVYWRTLRRIAAT 169
+V +V KE L F+ R P+ E A NR G G W+ +RR +
Sbjct: 58 VVLHGYEVVKEALIDLGEEFSGRGHFPLAERA-----NRGFGIVFSNGKRWKEIRRFSLM 112
Query: 170 HLFCPKQIKGAEAQRLAIASQ-MVATFAGYKQGFCVREALKRASLNNMMCSVFGREYKLD 228
L K + R+ ++ +V K C + + N++CS+ ++ + D
Sbjct: 113 TLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFQK-RFD 171
Query: 229 SLNDEVKELRALVDEGYEILGI--LNWTDHLPWLADFDPQKIRFRCSKLAPKVNRFVGRI 286
+ + L ++E I+ + ++ P + D+ P LA + + +
Sbjct: 172 YKDQQFLNLMEKLNENIRIVSTPWIQICNNFPTIIDYFPGTHNKLLKNLAFMESDILEK- 230
Query: 287 VAQHKVQSNKQKNLDFVDVLLSLQGSDKLSDS------DMIAVLWEMIFRGTDTVAVLIE 340
V +H+ + DF+D L +K + +++ +++ GT+T + +
Sbjct: 231 VKEHQESMDINNPRDFIDCFLIKMEKEKQNQQSEFTIENLVITAADLLGAGTETTSTTLR 290
Query: 341 WILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSW 400
+ L L+ H +V ++V +E+++VVGR+R+ D G + Y AV+ EV R P S
Sbjct: 291 YALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQDRGHMPYTDAVVHEVQRYIDLIP-TSL 349
Query: 401 ARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERFLPKEGGVEFSVLGS 460
D Y +P+GTT + ++ ++ D + NP F P FL + G + S
Sbjct: 350 PHAVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLDEGGNFKKSNY-- 407
Query: 461 DLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEY 495
PF +G+R+C G+ L + ++ +L +
Sbjct: 408 ---FMPFSAGKRICVGEGLARMELFLFLTFILQNF 439
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 175/413 (42%), Gaps = 58/413 (14%)
Query: 115 VIVTSNPDVAKEILNSSV-FADRPVKESAYSLMFNRA--IGFAPYGVYWRTLRRIAATHL 171
V++ S + + ++ V FA RP + +Y L+ R I Y + W+ +++ + L
Sbjct: 70 VVLNSKRTIEEAMIRKWVDFAGRP-QIPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSAL 128
Query: 172 FCPKQIKGAEAQRLAIASQMVATFAGYKQGFCVREALK-------RASLNNMMCSV---- 220
L S M Q FC R ++ + + + CS+
Sbjct: 129 L------------LGTRSSMEPWVDQLTQEFCERMRVQAGAPVTIQKEFSLLTCSIICYL 176
Query: 221 -FGREYK--LDSLNDEVKELRALVDE-GYEILGILNWTDHLPWLADFDPQKIRFRCSKLA 276
FG + + + +D V++L D +IL D +P+L F P +R +
Sbjct: 177 TFGNKEDTLVHAFHDCVQDLMKTWDHWSIQIL------DMVPFLRFF-PNPGLWRLKQAI 229
Query: 277 PKVNRFVGRIVAQHKVQSNKQKNLDFVDVLLS-------LQGSDKLSDSDMIAVLWEMIF 329
+ V + + +HK + D D +L +G +L + + + ++
Sbjct: 230 ENRDHMVEKQLRRHKESMVAGQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFI 289
Query: 330 RGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRA---VAESDLGELIYLAAVIK 386
GT+T A + W +A L+ H ++Q R+ +ELD+ +G + V D L L A I
Sbjct: 290 GGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRARLPLLNATIA 349
Query: 387 EVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERF 446
EVLRL P PL R ++I GY +P G + N+ D VW+ P EF P+RF
Sbjct: 350 EVLRLRPVVPLALPHR-TTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRF 408
Query: 447 LPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLP 499
L E G S L FG G RVC G++L + +A LL + LP
Sbjct: 409 L--EPGANPSALA-------FGCGARVCLGESLARLELFVVLARLLQAFTLLP 452
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 104/447 (23%), Positives = 191/447 (42%), Gaps = 34/447 (7%)
Query: 66 KAKPIPGPRGLPVIGNMNLMMSLSHRKIAAAAESCKAKRLMAFSL--GDTRVIVTSNPDV 123
K +P PGP LPVIGN+ + + + I+ + + F+L G ++V +
Sbjct: 8 KGRP-PGPTPLPVIGNI---LQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEA 63
Query: 124 AKEILNS--SVFADR---PVKESAYSLMFNRAIGFA-PYGVYWRTLRRIAATHLFCPKQI 177
KE L F+ R P+ E A NR G G W+ +RR + L
Sbjct: 64 VKEALIDLGEEFSGRGIFPLAERA-----NRGFGIVFSNGKKWKEIRRFSLMTLRNFGMG 118
Query: 178 KGAEAQRLAIASQ-MVATFAGYKQGFCVREALKRASLNNMMCSVFGREYKLDSLNDEVKE 236
K + R+ ++ +V K C + + N++CS+ + + D + +
Sbjct: 119 KRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHK-RFDYKDQQFLN 177
Query: 237 LRALVDEGYEILGI--LNWTDHLPWLADFDPQKIRFRCSKLAPKVNRFVGRIVAQHKVQS 294
L ++E EIL + ++ P L D+ P + K + ++ V +H+
Sbjct: 178 LMEKLNENIEILSSPWIQVYNNFPALLDYFP-GTHNKLLKNVAFMKSYILEKVKEHQESM 236
Query: 295 NKQKNLDFVDVLLSLQGSDKLSDSDMIAV------LWEMIFRGTDTVAVLIEWILARLVL 348
+ DF+D L +K + + ++ GT+T + + + L L+
Sbjct: 237 DMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLK 296
Query: 349 HCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSWARLAITDT 408
H +V ++V +E+++V+GR+R+ D + Y AV+ EV R P S D
Sbjct: 297 HPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLP-TSLPHAVTCDI 355
Query: 409 TIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERFLPKEGGVEFSVLGSDLTLAPFG 468
Y +P+GTT ++++ ++ D + NP F P FL + G + S PF
Sbjct: 356 KFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKY-----FMPFS 410
Query: 469 SGRRVCPGKNLGLTTVSFWVASLLHEY 495
+G+R+C G+ L + ++ S+L +
Sbjct: 411 AGKRICVGEALAGMELFLFLTSILQNF 437
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 112/216 (51%), Gaps = 12/216 (5%)
Query: 282 FVGRIVAQHKVQSNKQKNLDFVDVLLSLQ--GSDKLSDSDMIAVLWEMIFRGTDTVAVLI 339
V I+A+ + ++ QK D + LL + D + + ++ + ++ G++T+A I
Sbjct: 226 LVDEIIAERR--ASGQKPDDLLTALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTI 283
Query: 340 EWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLS 399
W+L L H + R+ DE++ V G R VA D+ +L + VI E +RL P +L+
Sbjct: 284 MWLLQALADHPEHADRIRDEVEAVTG-GRPVAFEDVRKLRHTGNVIVEAMRLRPAVWVLT 342
Query: 400 WARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERFLPKEGGVEFSVLG 459
R A+ ++ + GY +P G + + +AI RDP + + LEF P+R+LP E +
Sbjct: 343 --RRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLP-----ERAANV 395
Query: 460 SDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEY 495
+ PF +G+R CP + + ++ A+L +Y
Sbjct: 396 PKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKY 431
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/470 (22%), Positives = 192/470 (40%), Gaps = 65/470 (13%)
Query: 58 KRGSSSFVKAKPIPGPRGLPVIGNMNLMMSLSHRKIAAAAESCKAKRLMAFSL--GDTRV 115
K+ SS + K PGP LPVIGN+ + + + I+ + + F+L G +
Sbjct: 3 KKTSSG--RGKLPPGPTPLPVIGNI---LQIGIKDISKSLTNLSKVYGPVFTLYFGLKPI 57
Query: 116 IVTSNPDVAKEILNS--SVFADR---PVKESAYSLMFNRAIGFA-PYGVYWRTLRRIAAT 169
+V + KE L F+ R P+ E A NR G G W+ +RR +
Sbjct: 58 VVLHGYEAVKEALIDLGEEFSGRGIFPLAERA-----NRGFGIVFSNGKKWKEIRRFSLM 112
Query: 170 HLFCPKQIKGAEAQRLAIASQ-MVATFAGYKQGFCVREALKRASLNNMMCSVFGREYKLD 228
L K + R+ ++ +V K C + + N++CS+ + + D
Sbjct: 113 TLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHK-RFD 171
Query: 229 SLNDEVKELRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRFVG---- 284
+ + L ++E +IL PW+ C+ +P ++ F G
Sbjct: 172 YKDQQFLNLMEKLNENIKILSS-------PWIQ---------ICNNFSPIIDYFPGTHNK 215
Query: 285 -------------RIVAQHKVQSNKQKNLDFVDVLLSLQGSDKLSDSDMIAV------LW 325
V +H+ + DF+D L +K + +
Sbjct: 216 LLKNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAV 275
Query: 326 EMIFRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVI 385
++ GT+T + + + L L+ H +V ++V +E+++V+GR+R+ D + Y AV+
Sbjct: 276 DLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVV 335
Query: 386 KEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPER 445
EV R P S D Y +P+GTT ++++ ++ D + NP F P
Sbjct: 336 HEVQRYIDLLP-TSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHH 394
Query: 446 FLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEY 495
FL + G + S PF +G+R+C G+ L + ++ S+L +
Sbjct: 395 FLDEGGNFKKSKY-----FMPFSAGKRICVGEALAGMELFLFLTSILQNF 439
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 109/218 (50%), Gaps = 15/218 (6%)
Query: 284 GRIVAQHKVQSNKQKNLDFVDVLLSLQ---GSDKLSDSDMIAVLWEMIFRGTDTVAVLIE 340
GRI +S++ D +DVL++++ G+ + S ++ + M+F G T +
Sbjct: 211 GRIANPPTDKSDR----DMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTAS 266
Query: 341 WILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSW 400
W L L+ H D + V DELD++ G R+V+ L ++ L V+KE LRLHP PL+
Sbjct: 267 WTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHP--PLIIL 324
Query: 401 ARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERF-LPKEGGVEFSVLG 459
R+A + + G+ + G + +R P+ + +P +F+P R+ P++ L
Sbjct: 325 MRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQ-----EDLL 379
Query: 460 SDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAW 497
+ T PFG+GR C G + + + LL EY +
Sbjct: 380 NRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEF 417
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 109/218 (50%), Gaps = 15/218 (6%)
Query: 284 GRIVAQHKVQSNKQKNLDFVDVLLSLQ---GSDKLSDSDMIAVLWEMIFRGTDTVAVLIE 340
GRI +S++ D +DVL++++ G+ + S ++ + M+F G T +
Sbjct: 211 GRIANPPTDKSDR----DMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTAS 266
Query: 341 WILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSW 400
W L L+ H D + V DELD++ G R+V+ L ++ L V+KE LRLHP PL+
Sbjct: 267 WTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHP--PLIIL 324
Query: 401 ARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERF-LPKEGGVEFSVLG 459
R+A + + G+ + G + +R P+ + +P +F+P R+ P++ L
Sbjct: 325 MRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQ-----EDLL 379
Query: 460 SDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAW 497
+ T PFG+GR C G + + + LL EY +
Sbjct: 380 NRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEF 417
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 109/218 (50%), Gaps = 15/218 (6%)
Query: 284 GRIVAQHKVQSNKQKNLDFVDVLLSLQ---GSDKLSDSDMIAVLWEMIFRGTDTVAVLIE 340
GRI +S++ D +DVL++++ G+ + S ++ + M+F G T +
Sbjct: 211 GRIANPPTDKSDR----DMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTAS 266
Query: 341 WILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSW 400
W L L+ H D + V DELD++ G R+V+ L ++ L V+KE LRLHP PL+
Sbjct: 267 WTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHP--PLIIL 324
Query: 401 ARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERF-LPKEGGVEFSVLG 459
R+A + + G+ + G + +R P+ + +P +F+P R+ P++ L
Sbjct: 325 MRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQ-----EDLL 379
Query: 460 SDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAW 497
+ T PFG+GR C G + + + LL EY +
Sbjct: 380 NRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEF 417
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 109/218 (50%), Gaps = 15/218 (6%)
Query: 284 GRIVAQHKVQSNKQKNLDFVDVLLSLQ---GSDKLSDSDMIAVLWEMIFRGTDTVAVLIE 340
GRI +S++ D +DVL++++ G+ + S ++ + M+F G T +
Sbjct: 211 GRIANPPTDKSDR----DMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTAS 266
Query: 341 WILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSW 400
W L L+ H D + V DELD++ G R+V+ L ++ L V+KE LRLHP PL+
Sbjct: 267 WTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHP--PLIIL 324
Query: 401 ARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERF-LPKEGGVEFSVLG 459
R+A + + G+ + G + +R P+ + +P +F+P R+ P++ L
Sbjct: 325 MRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQ-----EDLL 379
Query: 460 SDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAW 497
+ T PFG+GR C G + + + LL EY +
Sbjct: 380 NRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEF 417
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 117/250 (46%), Gaps = 18/250 (7%)
Query: 260 LADFDPQKIR-FRCSKLAPKVNRFVGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDKLSDS 318
LA F P K + R + + + R VGR Q + ++ K+ D+L + +++ +
Sbjct: 181 LAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILKAEEGAQD 240
Query: 319 D--MIAVLWEMIFRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLG 376
D ++ G +T A + + + L ++ +R+ E+D+V+G R + DLG
Sbjct: 241 DEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLG 300
Query: 377 ELIYLAAVIKEVLRLHPPGPLLSWA--RLAITDTTIDGYHVPRGTTAMVNMWAISRDPDV 434
L YL+ V+KE LRL+PP +W RL +T IDG VP T + + + + R
Sbjct: 301 RLQYLSQVLKESLRLYPP----AWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTY 356
Query: 435 WKNPLEFIPERFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLH- 493
+++PL F P+RF P F T PF G R C G+ V +A LL
Sbjct: 357 FEDPLTFNPDRFGPGAPKPRF-------TYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQR 409
Query: 494 -EYAWLPSAQ 502
E+ +P +
Sbjct: 410 LEFRLVPGQR 419
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 77/171 (45%), Gaps = 7/171 (4%)
Query: 327 MIFRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIK 386
++F G +T+ + L H D++ RV E +K+ AE+ L ++ YL V++
Sbjct: 251 LLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQELTAET-LKKMPYLDQVLQ 309
Query: 387 EVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERF 446
EVLRL PP + R I D G+H P+G + DPD++ +P +F PERF
Sbjct: 310 EVLRLIPP--VGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERF 367
Query: 447 LPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAW 497
P PFG G R C GK + + L+ ++ W
Sbjct: 368 TPDGSATH----NPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDW 414
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/373 (20%), Positives = 149/373 (39%), Gaps = 40/373 (10%)
Query: 157 GVYWRTLRRIAATHLFCPKQIKGAEAQRLAIASQ-MVATFAGYKQGFCVREALKRASLNN 215
G W+ LRR + T + K + +R+ +Q ++ K L ++ N
Sbjct: 99 GNRWKVLRRFSVTTMRDFGMGKRSVEERIQEEAQCLIEELRKSKGALMDPTFLFQSITAN 158
Query: 216 MMCS-VFGREYKLDSLNDEVKELRALVDEGYEILGILN------------WTDHLPWLAD 262
++CS VFG+ + +E +++ Y+ +++ + H P
Sbjct: 159 IICSIVFGKRFHYQD-----QEFLKMLNLFYQTFSLISSVFGQLFELFSGFLKHFPGAHR 213
Query: 263 FDPQKIRFRCSKLAPKVNRFVGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK------LS 316
+ K ++N ++G V +H+ + D +D L +K S
Sbjct: 214 --------QVYKNLQEINAYIGHSVEKHRETLDPSAPRDLIDTYLLHMEKEKSNAHSEFS 265
Query: 317 DSDMIAVLWEMIFRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLG 376
++ + F GT+T + + + ++ + V RV+ E+++V+G R D
Sbjct: 266 HQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRA 325
Query: 377 ELIYLAAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWK 436
++ Y AVI E+ R P + + T+ GY +P+ T + + DP ++
Sbjct: 326 KMPYTEAVIYEIQRFSDLLP-MGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFE 384
Query: 437 NPLEFIPERFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYA 496
P F P+ FL G L PF G+R+C G+ + + + ++L ++
Sbjct: 385 KPDAFNPDHFLDANGA-----LKKTEAFIPFSLGKRICLGEGIARAELFLFFTTILQNFS 439
Query: 497 WL-PSAQNTVDLS 508
P A +DL+
Sbjct: 440 MASPVAPEDIDLT 452
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 301 DFVDVLLSLQGSDKLSDSDMIAVLWEMIFRGTDTVAVLIEWILARLVLHCDVQSRVHDEL 360
D+ +L L G K+S D+ A + EM+ G DT ++ ++W L + + VQ D L
Sbjct: 257 DYRGILYRLLGDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQ----DML 312
Query: 361 DKVVGRSRAVAESDLGELIYLA----AVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVP 416
V +R A+ D+ ++ L A IKE LRLHP L R + D + Y +P
Sbjct: 313 RAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQ--RYLVNDLVLRDYMIP 370
Query: 417 RGTTAMVNMWAISRDPDVWKNPLEFIPERFLPKEGGVE-FSVLGSDLTLAPFGSGRRVCP 475
T V ++A+ R+P + +P F P R+L K+ + F LG FG G R C
Sbjct: 371 AKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNITYFRNLG-------FGWGVRQCL 423
Query: 476 GKNLGLTTVSFWVASLLHEY 495
G+ + ++ ++ ++L +
Sbjct: 424 GRRIAELEMTIFLINMLENF 443
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 301 DFVDVLLSLQGSDKLSDSDMIAVLWEMIFRGTDTVAVLIEWILARLVLHCDVQSRVHDEL 360
D+ +L L G K+S D+ A + EM+ G DT ++ ++W L + + VQ D L
Sbjct: 254 DYRGILYRLLGDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQ----DML 309
Query: 361 DKVVGRSRAVAESDLGELIYLA----AVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVP 416
V +R A+ D+ ++ L A IKE LRLHP L R + D + Y +P
Sbjct: 310 RAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQ--RYLVNDLVLRDYMIP 367
Query: 417 RGTTAMVNMWAISRDPDVWKNPLEFIPERFLPKEGGVE-FSVLGSDLTLAPFGSGRRVCP 475
T V ++A+ R+P + +P F P R+L K+ + F LG FG G R C
Sbjct: 368 AKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNITYFRNLG-------FGWGVRQCL 420
Query: 476 GKNLGLTTVSFWVASLLHEY 495
G+ + ++ ++ ++L +
Sbjct: 421 GRRIAELEMTIFLINMLENF 440
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 10/205 (4%)
Query: 304 DVLLSLQGSDKLSDSDMIAVLWEMIFRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKV 363
D L + D LS ++ A + E+ +T A + WIL L + Q R+ E+ V
Sbjct: 268 DFLCDIYQQDHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSV 327
Query: 364 VGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMV 423
+ ++ DL + YL A +KE +RL P P + R T + Y +P+GT +
Sbjct: 328 LPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPFTT--RTLDKPTVLGEYALPKGTVLTL 385
Query: 424 NMWAISRDPDVWKNPLEFIPERFLPKEGGVE-FSVLGSDLTLAPFGSGRRVCPGKNLGLT 482
N + D +++ +F PER+L KE + F+ L PFG G+R+C G+ L
Sbjct: 386 NTQVLGSSEDNFEDSHKFRPERWLQKEKKINPFAHL-------PFGIGKRMCIGRRLAEL 438
Query: 483 TVSFWVASLLHEYAWLPSAQNTVDL 507
+ + ++ +Y + + V++
Sbjct: 439 QLHLALCWIIQKYDIVATDNEPVEM 463
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 18/200 (9%)
Query: 301 DFVDVLLSLQGSDKLSDSDMIAVLWEMIFRGTDTVAVLIEWILARLVLHCDVQSRVHDEL 360
++ +L L S+K+ D+ A + EM+ G +T ++ ++W L + +VQ + +E
Sbjct: 258 NYPGILYCLLKSEKMLLEDVKANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREE- 316
Query: 361 DKVVGRSRAVAESDLGELIY----LAAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVP 416
V +R AE D+ +++ L A IKE LRLHP ++ R +D + Y +P
Sbjct: 317 ---VLNARRQAEGDISKMLQMVPLLKASIKETLRLHPIS--VTLQRYPESDLVLQDYLIP 371
Query: 417 RGTTAMVNMWAISRDPDVWKNPLEFIPERFLPKEGG-VEFSVLGSDLTLAPFGSGRRVCP 475
T V ++A+ RDP + +P +F P R+L K+ + F LG FG G R C
Sbjct: 372 AKTLVQVAIYAMGRDPAFFSSPDKFDPTRWLSKDKDLIHFRNLG-------FGWGVRQCV 424
Query: 476 GKNLGLTTVSFWVASLLHEY 495
G+ + ++ ++ +L +
Sbjct: 425 GRRIAELEMTLFLIHILENF 444
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 133/316 (42%), Gaps = 27/316 (8%)
Query: 204 VREALKRASLNNMMCSVFGREYKLDSLNDEVKELRALVDEGYEILGILNWTDHLPWLADF 263
V EAL + + G+E + LN++V +L A +D G+ H WL
Sbjct: 146 VFEALSELIILTASHCLHGKEIR-SQLNEKVAQLYADLDGGFS---------HAAWLL-- 193
Query: 264 DPQKIRFRCSKLAPKVNRFVGRIV--AQHKVQSNKQKNLDFVDVLLSLQGSD--KLSDSD 319
P + + + +R + I A K + +++K D + LL D L+D +
Sbjct: 194 -PGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQSQEKIDDILQTLLDATYKDGRPLTDDE 252
Query: 320 MIAVLWEMIFRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESD-LGEL 378
+ +L ++ G T + W+ L +Q + + E V G + D L +L
Sbjct: 253 VAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDL 312
Query: 379 IYLAAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNP 438
L IKE LRL PP ++ R+A T T+ GY +P G V+ R D W
Sbjct: 313 NLLDRCIKETLRLRPP--IMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVER 370
Query: 439 LEFIPERFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTV-SFWVASL-LHEYA 496
L+F P+R+L G PFG+GR C G+N + + W L L+E+
Sbjct: 371 LDFNPDRYLQDNPAS-----GEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFD 425
Query: 497 WLPSAQNTVDLSEVLR 512
+ TV+ + ++
Sbjct: 426 LIDGYFPTVNYTTMIH 441
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 150/361 (41%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 108 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 164
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 165 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 216
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G +T +
Sbjct: 217 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSG 272
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 273 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 331
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 332 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 382
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R CPG+ L + + +L + + +D+ E L L
Sbjct: 383 PSAIPQHAFKPFGNGQRACPGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP 442
Query: 516 E 516
E
Sbjct: 443 E 443
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 151/361 (41%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEYIEVPEDMTRLTLDTIGLC---GFNYRFN 163
Query: 229 SLNDE------VKELRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + + +RAL DE L N D +D K +F+ +N
Sbjct: 164 SFYRDQPHPFIISMIRAL-DEVMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 215
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G +T +
Sbjct: 216 VDKIIADRKASGEQSDDL----LTQMLNGKDPETGEPLDDGNISYQIITFLIAGHETTSG 271
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V +V +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKVAEEATRVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 331 FSL--YAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 381
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 382 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP 441
Query: 516 E 516
E
Sbjct: 442 E 442
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 150/361 (41%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 163
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 164 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 215
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + +G +T +
Sbjct: 216 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLIKGHETTSG 271
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 331 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 381
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 382 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP 441
Query: 516 E 516
E
Sbjct: 442 E 442
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 148/360 (41%), Gaps = 39/360 (10%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNMMCSVFGREYKLDS 229
F + +KG A + IA Q+V + + V E + R +L+ + S F Y+ +S
Sbjct: 108 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLSGFN--YRFNS 165
Query: 230 LNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRFV 283
+ +RAL DE L N D +D K +F+ +N V
Sbjct: 166 FYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDLV 217
Query: 284 GRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAVL 338
+I+A K + +L + L G D L D ++ + + G +T + L
Sbjct: 218 DKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGL 273
Query: 339 IEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPLL 398
+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 274 LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 332
Query: 399 SWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEFS 456
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 333 SL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------ENP 383
Query: 457 VLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSCE 516
PFG+G+R C G+ L + + +L + + +D+ E L L E
Sbjct: 384 SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 443
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 149/361 (41%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 163
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 164 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 215
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G +T +
Sbjct: 216 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSG 271
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 331 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 381
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R C GK L + + +L + + +D+ E L L
Sbjct: 382 PSAIPQHAFKPFGNGQRACIGKQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP 441
Query: 516 E 516
E
Sbjct: 442 E 442
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 150/361 (41%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 163
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 164 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 215
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + +G +T +
Sbjct: 216 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLIQGHETTSG 271
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 331 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 381
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 382 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP 441
Query: 516 E 516
E
Sbjct: 442 E 442
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 149/361 (41%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 113 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 169
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 170 SFYRDQPHPFITSMVRAL-DEAMNKLQRTNPDD-----PAYDENKRQFQEDIKV--MNDL 221
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G +T +
Sbjct: 222 VDKIIADRKASGEQSDDL----LTHMLHGKDPETGEPLDDENIRYQIVTFLIAGHETTSG 277
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 278 LLSFTLYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 336
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 337 FSL--YAKEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 387
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 388 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP 447
Query: 516 E 516
E
Sbjct: 448 E 448
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 149/361 (41%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 163
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 164 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 215
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G +T +
Sbjct: 216 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSG 271
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 331 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 381
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 382 PSAIPQHAFKPFGNGQRACEGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP 441
Query: 516 E 516
E
Sbjct: 442 E 442
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 149/361 (41%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 163
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 164 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 215
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G +T +
Sbjct: 216 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLIEGHETTSG 271
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 331 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 381
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 382 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP 441
Query: 516 E 516
E
Sbjct: 442 E 442
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 149/361 (41%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 163
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 164 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 215
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G +T +
Sbjct: 216 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLIHGHETTSG 271
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 331 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 381
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 382 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP 441
Query: 516 E 516
E
Sbjct: 442 E 442
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 149/361 (41%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 110 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 166
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 167 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 218
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G +T +
Sbjct: 219 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSG 274
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 275 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 333
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 334 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 384
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 385 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP 444
Query: 516 E 516
E
Sbjct: 445 E 445
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 149/361 (41%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 110 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 166
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 167 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 218
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G +T +
Sbjct: 219 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSG 274
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 275 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTSPA 333
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 334 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 384
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 385 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP 444
Query: 516 E 516
E
Sbjct: 445 E 445
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 149/361 (41%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 163
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 164 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 215
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G +T +
Sbjct: 216 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLIMGHETTSG 271
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 331 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 381
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 382 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP 441
Query: 516 E 516
E
Sbjct: 442 E 442
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 149/361 (41%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 163
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 164 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 215
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G +T +
Sbjct: 216 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSG 271
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 331 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 381
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 382 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP 441
Query: 516 E 516
E
Sbjct: 442 E 442
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 149/361 (41%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 163
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 164 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 215
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G +T +
Sbjct: 216 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSG 271
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 331 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 381
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 382 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP 441
Query: 516 E 516
E
Sbjct: 442 E 442
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 149/361 (41%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 108 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 164
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 165 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 216
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G +T +
Sbjct: 217 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSG 272
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 273 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 331
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 332 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 382
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 383 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP 442
Query: 516 E 516
E
Sbjct: 443 E 443
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 149/361 (41%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 163
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 164 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 215
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G +T +
Sbjct: 216 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSG 271
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 331 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 381
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 382 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP 441
Query: 516 E 516
E
Sbjct: 442 E 442
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 149/361 (41%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 163
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 164 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 215
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G +T +
Sbjct: 216 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSG 271
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 331 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 381
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 382 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP 441
Query: 516 E 516
E
Sbjct: 442 E 442
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 149/361 (41%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 163
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 164 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 215
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G +T +
Sbjct: 216 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSG 271
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 331 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 381
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 382 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP 441
Query: 516 E 516
E
Sbjct: 442 E 442
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 149/361 (41%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 163
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 164 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 215
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G +T +
Sbjct: 216 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSG 271
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 331 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 381
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 382 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP 441
Query: 516 E 516
E
Sbjct: 442 E 442
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 149/361 (41%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 163
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 164 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 215
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G +T +
Sbjct: 216 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSG 271
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 331 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 381
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 382 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP 441
Query: 516 E 516
E
Sbjct: 442 E 442
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 149/361 (41%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 108 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 164
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 165 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 216
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G +T +
Sbjct: 217 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSG 272
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 273 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPP 331
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 332 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 382
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 383 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP 442
Query: 516 E 516
E
Sbjct: 443 E 443
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 149/361 (41%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 163
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 164 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 215
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G +T +
Sbjct: 216 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITELIAGHETTSG 271
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 331 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 381
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 382 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP 441
Query: 516 E 516
E
Sbjct: 442 E 442
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 149/361 (41%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 163
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 164 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 215
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G +T +
Sbjct: 216 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLICGHETTSG 271
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 331 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 381
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 382 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP 441
Query: 516 E 516
E
Sbjct: 442 E 442
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 149/361 (41%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 108 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 164
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 165 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 216
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G + +
Sbjct: 217 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSG 272
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P GP
Sbjct: 273 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTGPA 331
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 332 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 382
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 383 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLVLKP 442
Query: 516 E 516
E
Sbjct: 443 E 443
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 149/361 (41%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 110 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 166
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 167 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 218
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G +T +
Sbjct: 219 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSG 274
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 275 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTVPA 333
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 334 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 384
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 385 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP 444
Query: 516 E 516
E
Sbjct: 445 E 445
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 149/361 (41%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 163
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 164 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 215
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G + +
Sbjct: 216 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSG 271
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P GP
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTGPA 330
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 331 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 381
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 382 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLVLKP 441
Query: 516 E 516
E
Sbjct: 442 E 442
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 149/361 (41%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 163
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 164 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 215
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G +T +
Sbjct: 216 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSG 271
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 331 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 381
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
P+G+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 382 PSAIPQHAFKPYGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP 441
Query: 516 E 516
E
Sbjct: 442 E 442
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 154/367 (41%), Gaps = 34/367 (9%)
Query: 160 WRTLRRIAATHLFCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM- 216
W+ R I L + +KG A + IA Q+V + + V E + R +L+ +
Sbjct: 97 WKKARNILLPRL-SQQAMKGYHAMMVDIAVQLVQKWERLNSDEHIEVPEDMTRLTLDTIG 155
Query: 217 MCSVFGREYKLDSLNDEVKE--LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSK 274
+C G Y+++S + + ++V E++ L + P +D K +F+
Sbjct: 156 LC---GFNYRINSFYRDQPHPFITSMVRALDEVMNKLQRAN--PDDPAYDENKRQFQEDI 210
Query: 275 LAPKVNRFVGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIF 329
+N V +I+A K + +L + L G D L D ++ + +
Sbjct: 211 KV--MNDLVDKIIADRKASGEQSDDL----LTHMLHGKDPETGEPLDDENIRYQIITFLI 264
Query: 330 RGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVL 389
G +T + L+ + L LV + V + +E +V+ + + +L Y+ V+ E L
Sbjct: 265 AGHETTSGLLTFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEAL 323
Query: 390 RLHPPGPLLSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFL 447
R+ P P S A DT + G Y + +G MV + + RD VW + +E F PERF
Sbjct: 324 RIWPTAPAFSL--YAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERF- 380
Query: 448 PKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDL 507
E PFG+G+R C G+ L + + +L + + +D+
Sbjct: 381 ------ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDI 434
Query: 508 SEVLRLS 514
E L L
Sbjct: 435 EETLTLK 441
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 148/361 (40%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 163
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 164 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 215
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G + +
Sbjct: 216 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLIAGHENTSG 271
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 331 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 381
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 382 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP 441
Query: 516 E 516
E
Sbjct: 442 E 442
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 122/271 (45%), Gaps = 28/271 (10%)
Query: 237 LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRFVGRI-------VAQ 289
LR +DE ++ I + D W A I F+ S L K + V + +A+
Sbjct: 204 LRIPLDESAIVVKIQGYFD--AWQALLIKPDIFFKISWLYKKYEKSVKDLKDAIEVLIAE 261
Query: 290 HKVQSNKQKNL----DFVDVLLSLQGSDKLSDSDMIAVLWEMIFRGTDTVAVLIEWILAR 345
+ + + ++ L DF L+ + L+ ++ + EM+ DT++V + ++L
Sbjct: 262 KRRRISTEEKLEECMDFATELILAEKRGDLTRENVNQCILEMLIAAPDTMSVSLFFMLFL 321
Query: 346 LVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSWARLAI 405
+ H +V+ + E+ V+G R + D+ +L + I E +R P L+ R A+
Sbjct: 322 IAKHPNVEEAIIKEIQTVIG-ERDIKIDDIQKLKVMENFIYESMRYQPVVDLV--MRKAL 378
Query: 406 TDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERFLPKEGGVE-FSVLGSDLTL 464
D IDGY V +GT ++N+ + R LEF P+ P E +E F+
Sbjct: 379 EDDVIDGYPVKKGTNIILNIGRMHR--------LEFFPK---PNEFTLENFAKNVPYRYF 427
Query: 465 APFGSGRRVCPGKNLGLTTVSFWVASLLHEY 495
PFG G R C GK + + + + +LL +
Sbjct: 428 QPFGFGPRGCAGKYIAMVMMKAILVTLLRRF 458
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 149/361 (41%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 108 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 164
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 165 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 216
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G ++ +
Sbjct: 217 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSG 272
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 273 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 331
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 332 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 382
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 383 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLLLKP 442
Query: 516 E 516
E
Sbjct: 443 E 443
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 149/361 (41%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 163
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 164 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 215
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G ++ +
Sbjct: 216 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSG 271
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 331 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 381
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 382 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLLLKP 441
Query: 516 E 516
E
Sbjct: 442 E 442
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 148/361 (40%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 163
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 164 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 215
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G + +
Sbjct: 216 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSG 271
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 331 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 381
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 382 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP 441
Query: 516 E 516
E
Sbjct: 442 E 442
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 148/361 (40%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 163
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 164 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 215
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G + +
Sbjct: 216 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSG 271
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 331 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 381
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 382 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP 441
Query: 516 E 516
E
Sbjct: 442 E 442
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 148/361 (40%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 163
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 164 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 215
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G + +
Sbjct: 216 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSG 271
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 331 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 381
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 382 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP 441
Query: 516 E 516
E
Sbjct: 442 E 442
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 149/361 (41%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 163
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 164 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 215
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G +T +
Sbjct: 216 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSG 271
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 331 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 381
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
P+G+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 382 PSAIPQHAFKPWGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP 441
Query: 516 E 516
E
Sbjct: 442 E 442
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 148/361 (40%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 163
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 164 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 215
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G +T +
Sbjct: 216 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSG 271
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 331 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 381
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
P G+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 382 PSAIPQHAFKPHGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP 441
Query: 516 E 516
E
Sbjct: 442 E 442
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 148/361 (40%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 163
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 164 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 215
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G +T +
Sbjct: 216 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSG 271
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 331 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 381
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
P G+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 382 PSAIPQHAFKPAGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP 441
Query: 516 E 516
E
Sbjct: 442 E 442
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 147/361 (40%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 108 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 164
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 165 SFYRDQPHPFITSMVRAL-DEAMNKLRRANPDD-----PAYDENKRQFQEDIKV--MNDL 216
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G + +
Sbjct: 217 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSG 272
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 273 LLSFALYFLVKNPHELQKAAEEAARVL-VDPVPSHKQVKQLKYVGMVLNEALRLWPTAPA 331
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD VW + +E F PERF E
Sbjct: 332 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERF-------EN 382
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 383 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP 442
Query: 516 E 516
E
Sbjct: 443 E 443
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 148/361 (40%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 163
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 164 SFYRDQPHPFITSMVRAL-DEAMNKLQRANPDD-----PAYDENKRQFQEDIKV--MNDL 215
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G ++ +
Sbjct: 216 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSG 271
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + V + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 272 LLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 331 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 381
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R C G+ L + + +L + + +D+ E L
Sbjct: 382 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETQLLKP 441
Query: 516 E 516
E
Sbjct: 442 E 442
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 147/361 (40%), Gaps = 41/361 (11%)
Query: 172 FCPKQIKGAEAQRLAIASQMVATFA--GYKQGFCVREALKRASLNNM-MCSVFGREYKLD 228
F + +KG A + IA Q+V + + V E + R +L+ + +C G Y+ +
Sbjct: 107 FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLC---GFNYRFN 163
Query: 229 SLNDEVKE------LRALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRF 282
S + +RAL DE L N D +D K +F+ +N
Sbjct: 164 SFYRDQPHPFITSMVRAL-DEAMNKLRRANPDD-----PAYDENKRQFQEDIKV--MNDL 215
Query: 283 VGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDK-----LSDSDMIAVLWEMIFRGTDTVAV 337
V +I+A K + +L + L G D L D ++ + + G + +
Sbjct: 216 VDKIIADRKASGEQSDDL----LTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSG 271
Query: 338 LIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPL 397
L+ + L LV + + +E +V+ + + +L Y+ V+ E LRL P P
Sbjct: 272 LLSFALYFLVKNPHELQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 398 LSWARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLE-FIPERFLPKEGGVEF 455
S A DT + G Y + +G MV + + RD +W + +E F PERF E
Sbjct: 331 FSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-------EN 381
Query: 456 SVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEVLRLSC 515
PFG+G+R C G+ L + + +L + + +D+ E L L
Sbjct: 382 PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP 441
Query: 516 E 516
E
Sbjct: 442 E 442
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 8/152 (5%)
Query: 326 EMIFRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVI 385
E+ DT A + L L + DVQ + E + EL L A +
Sbjct: 284 ELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASISEHPQKATTELPLLRAAL 343
Query: 386 KEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPER 445
KE LRL+P G L R+ +D + YH+P GT V ++++ R+ ++ P + P+R
Sbjct: 344 KETLRLYPVGLFLE--RVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFPRPERYNPQR 401
Query: 446 FLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGK 477
+L G G + PFG G R C G+
Sbjct: 402 WLDIRGS------GRNFHHVPFGFGMRQCLGR 427
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 106/248 (42%), Gaps = 23/248 (9%)
Query: 257 LPWLADFDPQKIRFRCSKLAPKVNRFVGRIVAQHKVQSNKQKNLDFVDVLLSLQGS---- 312
LPW+ P +RC ++ + I+ + + QK+ + D+L L G+
Sbjct: 187 LPWILKL-PLPQSYRCRDARAELQDILSEIIIARE-KEEAQKDTNTSDLLAGLLGAVYRD 244
Query: 313 -DKLSDSDMIAVLWEMIFRGTDTVAVLIEWILARLVLHCDVQ--SRVHDELDKVVGRSRA 369
++S ++ ++ +F G T + W L L+ + + +++H E+D+ +
Sbjct: 245 GTRMSQHEVCGMIVAAMFAGQHTSTITTTWSLLHLMDPRNKRHLAKLHQEIDEFPAQLNY 304
Query: 370 VAESDLGELIYLAAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAIS 429
++ + E+ + +E +R PP L+ R + + Y VP G +
Sbjct: 305 --DNVMEEMPFAEQCARESIRRDPP--LVMLMRKVLKPVQVGKYVVPEGDIIACSPLLSH 360
Query: 430 RDPDVWKNPLEFIPERFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVA 489
+D + + NP E+ PER ++ D FG+G C G+ GL V +A
Sbjct: 361 QDEEAFPNPREWNPER----------NMKLVDGAFCGFGAGVHKCIGEKFGLLQVKTVLA 410
Query: 490 SLLHEYAW 497
++L +Y +
Sbjct: 411 TVLRDYDF 418
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 109/247 (44%), Gaps = 22/247 (8%)
Query: 257 LPWLADFDPQKIRFRCSKLAPKVNRFVGRI-VAQHKVQSNKQKNL-DFVDVLLSLQGSD- 313
+PWL P RC + ++ + +G I VA+ K +++K N D + LL D
Sbjct: 192 MPWLLRL-PLPQSARCREARAELQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDG 250
Query: 314 -KLSDSDMIAVLWEMIFRGTDTVAVLIEWILARLVLHCDVQ--SRVHDELDKVVGRSRAV 370
++S ++ ++ +F G T + W + L+ + + ++H E+D+ +
Sbjct: 251 TRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQLNY- 309
Query: 371 AESDLGELIYLAAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISR 430
++ + E+ + ++E +R PP LL R+ + + Y VP+G +
Sbjct: 310 -DNVMDEMPFAERCVRESIRRDPP--LLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHH 366
Query: 431 DPDVWKNPLEFIPERFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVAS 490
D + + NP + PER + V+ + +G FG+G C G+ L V +A+
Sbjct: 367 DEEAFPNPRLWDPER----DEKVDGAFIG-------FGAGVHKCIGQKFALLQVKTILAT 415
Query: 491 LLHEYAW 497
EY +
Sbjct: 416 AFREYDF 422
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 109/247 (44%), Gaps = 22/247 (8%)
Query: 257 LPWLADFDPQKIRFRCSKLAPKVNRFVGRI-VAQHKVQSNKQKNL-DFVDVLLSLQGSD- 313
+PWL P RC + ++ + +G I VA+ K +++K N D + LL D
Sbjct: 201 MPWLLRL-PLPQSARCREARAELQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDG 259
Query: 314 -KLSDSDMIAVLWEMIFRGTDTVAVLIEWILARLVLHCDVQ--SRVHDELDKVVGRSRAV 370
++S ++ ++ +F G T + W + L+ + + ++H E+D+ +
Sbjct: 260 TRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQLNY- 318
Query: 371 AESDLGELIYLAAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISR 430
++ + E+ + ++E +R PP LL R+ + + Y VP+G +
Sbjct: 319 -DNVMDEMPFAERCVRESIRRDPP--LLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHH 375
Query: 431 DPDVWKNPLEFIPERFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVAS 490
D + + NP + PER + V+ + +G FG+G C G+ L V +A+
Sbjct: 376 DEEAFPNPRLWDPER----DEKVDGAFIG-------FGAGVHKCIGQKFALLQVKTILAT 424
Query: 491 LLHEYAW 497
EY +
Sbjct: 425 AFREYDF 431
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 109/247 (44%), Gaps = 22/247 (8%)
Query: 257 LPWLADFDPQKIRFRCSKLAPKVNRFVGRI-VAQHKVQSNKQKNL-DFVDVLLSLQGSD- 313
+PWL P RC + ++ + +G I VA+ K +++K N D + LL D
Sbjct: 186 MPWLLRL-PLPQSARCREARAELQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDG 244
Query: 314 -KLSDSDMIAVLWEMIFRGTDTVAVLIEWILARLVLHCDVQ--SRVHDELDKVVGRSRAV 370
++S ++ ++ +F G T + W + L+ + + ++H E+D+ +
Sbjct: 245 TRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQLNY- 303
Query: 371 AESDLGELIYLAAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISR 430
++ + E+ + ++E +R PP LL R+ + + Y VP+G +
Sbjct: 304 -DNVMDEMPFAERCVRESIRRDPP--LLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHH 360
Query: 431 DPDVWKNPLEFIPERFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVAS 490
D + + NP + PER + V+ + +G FG+G C G+ L V +A+
Sbjct: 361 DEEAFPNPRLWDPER----DEKVDGAFIG-------FGAGVHKCIGQKFALLQVKTILAT 409
Query: 491 LLHEYAW 497
EY +
Sbjct: 410 AFREYDF 416
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 14/117 (11%)
Query: 385 IKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPE 444
++EV R +P GP L L D + +GT+ +++++ + DP +W +P EF PE
Sbjct: 280 VQEVRRYYPFGPFL--GALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPE 337
Query: 445 RFLPKEGGVEFSVLGSDLTLAPFGSGR----RVCPGKNLGLTTVSFWVASLLHEYAW 497
RF +E + + P G G CPG+ + + + + L+H+ +
Sbjct: 338 RFAEREENL--------FDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEY 386
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 66/133 (49%), Gaps = 5/133 (3%)
Query: 365 GRSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSWARLAITDTTIDG-YHVPRGTTAMV 423
G +++++L +L L ++IKE LRL + A+ T DG Y++ + +
Sbjct: 313 GNPICLSQAELNDLPVLDSIIKESLRLSSASLNIRTAKEDFTLHLEDGSYNIRKDDIIAL 372
Query: 424 NMWAISRDPDVWKNPLEFIPERFLPKEGGVEFSVLGSDLTLA----PFGSGRRVCPGKNL 479
+ DP+++ +PL F +R+L + G + + + L L PFGSG +CPG+
Sbjct: 373 YPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLF 432
Query: 480 GLTTVSFWVASLL 492
+ + ++ +L
Sbjct: 433 AIHEIKQFLILML 445
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 66/133 (49%), Gaps = 5/133 (3%)
Query: 365 GRSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSWARLAITDTTIDG-YHVPRGTTAMV 423
G +++++L +L L ++IKE LRL + A+ T DG Y++ + +
Sbjct: 313 GNPICLSQAELNDLPVLDSIIKESLRLSSASLNIRTAKEDFTLHLEDGSYNIRKDDIIAL 372
Query: 424 NMWAISRDPDVWKNPLEFIPERFLPKEGGVEFSVLGSDLTLA----PFGSGRRVCPGKNL 479
+ DP+++ +PL F +R+L + G + + + L L PFGSG +CPG+
Sbjct: 373 YPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLF 432
Query: 480 GLTTVSFWVASLL 492
+ + ++ +L
Sbjct: 433 AIHEIKQFLILML 445
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 98/233 (42%), Gaps = 21/233 (9%)
Query: 271 RCSKLAPKVNRFVGRIV-AQHKVQSNKQKNL-DFVDVLLSLQGSD--KLSDSDMIAVLWE 326
RC + ++ + + I+ A+ + + NK + D + LLS D +S ++ ++
Sbjct: 201 RCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVA 260
Query: 327 MIFRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESD--LGELIYLAAV 384
+F G T ++ W + L+ +V+ + L K + A + + E+ +
Sbjct: 261 AMFAGQHTSSITTTWSMLHLMHPANVKHL--EALRKEIEEFPAQLNYNNVMDEMPFAERC 318
Query: 385 IKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPE 444
+E +R PP LL R + D + Y VP+G + D + + P + PE
Sbjct: 319 ARESIRRDPP--LLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPE 376
Query: 445 RFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAW 497
R + VE + +G FG+G C G+ GL V +A+ Y +
Sbjct: 377 R----DEKVEGAFIG-------FGAGVHKCIGQKFGLLQVKTILATAFRSYDF 418
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 98/233 (42%), Gaps = 21/233 (9%)
Query: 271 RCSKLAPKVNRFVGRIV-AQHKVQSNKQKNL-DFVDVLLSLQGSD--KLSDSDMIAVLWE 326
RC + ++ + + I+ A+ + + NK + D + LLS D +S ++ ++
Sbjct: 200 RCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVA 259
Query: 327 MIFRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESD--LGELIYLAAV 384
+F G T ++ W + L+ +V+ + L K + A + + E+ +
Sbjct: 260 AMFAGQHTSSITTTWSMLHLMHPANVKHL--EALRKEIEEFPAQLNYNNVMDEMPFAERC 317
Query: 385 IKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPE 444
+E +R PP LL R + D + Y VP+G + D + + P + PE
Sbjct: 318 ARESIRRDPP--LLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPE 375
Query: 445 RFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAW 497
R + VE + +G FG+G C G+ GL V +A+ Y +
Sbjct: 376 R----DEKVEGAFIG-------FGAGVHKCIGQKFGLLQVKTILATAFRSYDF 417
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 98/233 (42%), Gaps = 21/233 (9%)
Query: 271 RCSKLAPKVNRFVGRIV-AQHKVQSNKQKNL-DFVDVLLSLQGSD--KLSDSDMIAVLWE 326
RC + ++ + + I+ A+ + + NK + D + LLS D +S ++ ++
Sbjct: 202 RCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVA 261
Query: 327 MIFRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESD--LGELIYLAAV 384
+F G T ++ W + L+ +V+ + L K + A + + E+ +
Sbjct: 262 AMFAGQHTSSITTTWSMLHLMHPANVKHL--EALRKEIEEFPAQLNYNNVMDEMPFAERC 319
Query: 385 IKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPE 444
+E +R PP LL R + D + Y VP+G + D + + P + PE
Sbjct: 320 ARESIRRDPP--LLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPE 377
Query: 445 RFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAW 497
R + VE + +G FG+G C G+ GL V +A+ Y +
Sbjct: 378 R----DEKVEGAFIG-------FGAGVHKCIGQKFGLLQVKTILATAFRSYDF 419
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 98/233 (42%), Gaps = 21/233 (9%)
Query: 271 RCSKLAPKVNRFVGRIV-AQHKVQSNKQKNL-DFVDVLLSLQGSD--KLSDSDMIAVLWE 326
RC + ++ + + I+ A+ + + NK + D + LLS D +S ++ ++
Sbjct: 201 RCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVA 260
Query: 327 MIFRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESD--LGELIYLAAV 384
+F G T ++ W + L+ +V+ + L K + A + + E+ +
Sbjct: 261 AMFAGQHTSSITTTWSMLHLMHPANVKHL--EALRKEIEEFPAQLNYNNVMDEMPFAERC 318
Query: 385 IKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPE 444
+E +R PP LL R + D + Y VP+G + D + + P + PE
Sbjct: 319 ARESIRRDPP--LLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPE 376
Query: 445 RFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAW 497
R + VE + +G FG+G C G+ GL V +A+ Y +
Sbjct: 377 R----DEKVEGAFIG-------FGAGVHKCIGQKFGLLQVKTILATAFRSYDF 418
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 98/233 (42%), Gaps = 21/233 (9%)
Query: 271 RCSKLAPKVNRFVGRIV-AQHKVQSNKQKNL-DFVDVLLSLQGSD--KLSDSDMIAVLWE 326
RC + ++ + + I+ A+ + + NK + D + LLS D +S ++ ++
Sbjct: 214 RCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVA 273
Query: 327 MIFRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESD--LGELIYLAAV 384
+F G T ++ W + L+ +V+ + L K + A + + E+ +
Sbjct: 274 AMFAGQHTSSITTTWSMLHLMHPANVKHL--EALRKEIEEFPAQLNYNNVMDEMPFAERC 331
Query: 385 IKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPE 444
+E +R PP LL R + D + Y VP+G + D + + P + PE
Sbjct: 332 ARESIRRDPP--LLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPE 389
Query: 445 RFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAW 497
R + VE + +G FG+G C G+ GL V +A+ Y +
Sbjct: 390 R----DEKVEGAFIG-------FGAGVHKCIGQKFGLLQVKTILATAFRSYDF 431
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 96/233 (41%), Gaps = 21/233 (9%)
Query: 271 RCSKLAPKVNRFVGRIVAQHKVQS-NKQKNL-DFVDVLLSLQGSD--KLSDSDMIAVLWE 326
RC + ++ + + I+ K + NK + D + LLS D +S ++ ++
Sbjct: 214 RCHEARTELQKILSEIIIARKAAAVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVA 273
Query: 327 MIFRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESD--LGELIYLAAV 384
+F G T ++ W + L+ +V+ + L K + A + + E+ +
Sbjct: 274 AMFAGQHTSSITTTWSMLHLMHPANVKHL--EALRKEIEEFPAQLNYNNVMDEMPFAERC 331
Query: 385 IKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPE 444
+E +R PP LL R + D + Y VP+G + D + + P + PE
Sbjct: 332 ARESIRRDPP--LLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPE 389
Query: 445 RFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAW 497
R + VE + +G FG+G C G+ GL V +A+ Y +
Sbjct: 390 R----DEKVEGAFIG-------FGAGVHKCIGQKFGLLQVKTILATAFRSYDF 431
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 46/99 (46%), Gaps = 16/99 (16%)
Query: 382 AAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEF 441
+AVI+E +R PP L+S R A D TI + VP+G T ++ + A RDP + P F
Sbjct: 290 SAVIEETMRYDPPVQLVS--RYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRF 347
Query: 442 IPERFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLG 480
P+R + LG FG G C G L
Sbjct: 348 DPDR-------AQIRHLG-------FGKGAHFCLGAPLA 372
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 24/135 (17%)
Query: 363 VVGRSR-----AVAESDLGELIYLAAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPR 417
++G SR A+A+SD + ++ E +R P+ S+ R A+ DT + G ++ R
Sbjct: 280 IIGLSRNPEQLALAKSDPA---LIPRLVDEAVRWT--APVKSFMRTALADTEVRGQNIKR 334
Query: 418 GTTAMVNMWAISRDPDVWKNPLEFIPERFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGK 477
G M++ + +RD +V+ NP EF RF + G FG G +C G+
Sbjct: 335 GDRIMLSYPSANRDEEVFSNPDEFDITRFPNRHLG--------------FGWGAHMCLGQ 380
Query: 478 NLGLTTVSFWVASLL 492
+L + + LL
Sbjct: 381 HLAKLEMKIFFEELL 395
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 75/198 (37%), Gaps = 44/198 (22%)
Query: 301 DFVDVLLSLQGSDKLSDSDMIAVLWEMIFRGTDTVAVLIEWILARLVLHCDVQSRVHDEL 360
D + +LL + DKL++ + + + G +T LI + L+ H + ++ +
Sbjct: 205 DMISMLLKGREKDKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENP 264
Query: 361 DKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTT 420
D + ++E LR P + AR+A D I G + +G
Sbjct: 265 D------------------LIGTAVEECLRYESPTQMT--ARVASEDIDICGVTIRQGEQ 304
Query: 421 AMVNMWAISRDPDVWKNPLEFIPERFLPKEGGVEFSVLGSDLTLAP-----FGSGRRVCP 475
+ + A +RDP ++ NP F D+T +P FG G VC
Sbjct: 305 VYLLLGAANRDPSIFTNPDVF-------------------DITRSPNPHLSFGHGHHVCL 345
Query: 476 GKNLGLTTVSFWVASLLH 493
G +L + +LL
Sbjct: 346 GSSLARLEAQIAINTLLQ 363
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 17/100 (17%)
Query: 366 RSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNM 425
R+ V + D EL ++EV R +P GP + AR A D +G P G ++++
Sbjct: 264 RAALVQQPDYAELF-----VQEVRRFYPFGPAVV-AR-ASQDFEWEGMAFPEGRQVVLDL 316
Query: 426 WAISRDPDVWKNPLEFIPER----------FLPKEGGVEF 455
+ + D W +P EF PER F+P+ GG +
Sbjct: 317 YGSNHDAATWADPQEFRPERFRAWDEDSFNFIPQGGGDHY 356
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 18/102 (17%)
Query: 381 LAAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAIS--RDPDVWKNP 438
+ A+++EVLR PP P + R T + G +P MVN W +S RD D +P
Sbjct: 274 IPAIVEEVLRYRPPFPQMQ--RTTTKATEVAGVPIP--ADVMVNTWVLSANRDSDAHDDP 329
Query: 439 LEFIPERFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLG 480
F P R K GG + L+ FG G C G L
Sbjct: 330 DRFDPSR---KSGG------AAQLS---FGHGVHFCLGAPLA 359
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 18/102 (17%)
Query: 381 LAAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAIS--RDPDVWKNP 438
+ A+++EVLR PP P + R T + G +P MVN W +S RD D +P
Sbjct: 294 IPAIVEEVLRYRPPFPQMQ--RTTTKATEVAGVPIP--ADVMVNTWVLSANRDSDAHDDP 349
Query: 439 LEFIPERFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLG 480
F P R K GG + L+ FG G C G L
Sbjct: 350 DRFDPSR---KSGG------AAQLS---FGHGVHFCLGAPLA 379
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 26/163 (15%)
Query: 315 LSDSDMIAVLWEMIFRGTDTVAVLIEWILARLVLHC-DVQSRVHDELDKVVGRSRAVAES 373
LSD D++A++ ++ T+ + LA ++ H + +++D L RA+AE+
Sbjct: 254 LSDKDILALILNVLLAATEPA----DKTLALMIYHLLNNPEQMNDVLADRSLVPRAIAET 309
Query: 374 DLGELIYLAAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPD 433
LR PP L+ R DT + G + + T + A +RDP+
Sbjct: 310 ---------------LRYKPPVQLI--PRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPE 352
Query: 434 VWKNPLEFIPERFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPG 476
++ P F R ++ G++ + G+ LA FGSG C G
Sbjct: 353 AFEQPDVFNIHR---EDLGIKSAFSGAARHLA-FGSGIHNCVG 391
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 17/100 (17%)
Query: 366 RSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNM 425
R+ V + D EL ++EV R +P P + AR A D +G P G ++++
Sbjct: 256 RAALVQQPDYAELF-----VQEVRRFYPFFPAVV-AR-ASQDFEWEGMAFPEGRQVVLDL 308
Query: 426 WAISRDPDVWKNPLEFIPER----------FLPKEGGVEF 455
+ + D W +P EF PER F+P+ GG +
Sbjct: 309 YGSNHDAATWADPQEFRPERFRAWDEDSFNFIPQGGGDHY 348
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 17/100 (17%)
Query: 366 RSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNM 425
R+ V + D EL ++EV R +P P + AR A D +G P G ++++
Sbjct: 256 RAALVQQPDYAELF-----VQEVRRFYPFFPAVV-AR-ASQDFEWEGMAFPEGRQVVLDL 308
Query: 426 WAISRDPDVWKNPLEFIPER----------FLPKEGGVEF 455
+ + D W +P EF PER F+P+ GG +
Sbjct: 309 YGSNHDAATWADPQEFRPERFRAWDEDSFNFIPQGGGDHY 348
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 17/100 (17%)
Query: 366 RSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNM 425
R+ V + D EL ++EV R +P P + AR A D +G P G ++++
Sbjct: 256 RAALVQQPDYAELF-----VQEVRRFYPFFPAVV-AR-ASQDFEWEGMAFPEGRQVVLDL 308
Query: 426 WAISRDPDVWKNPLEFIPER----------FLPKEGGVEF 455
+ + D W +P EF PER F+P+ GG +
Sbjct: 309 YGSNHDAATWADPQEFRPERFRAWDEDSFNFIPQGGGDHY 348
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 17/100 (17%)
Query: 366 RSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNM 425
R+ V + D EL ++EV R +P P + AR A D +G P G ++++
Sbjct: 264 RAALVQQPDYAELF-----VQEVRRFYPFFPAVV-AR-ASQDFEWEGMAFPEGRQVVLDL 316
Query: 426 WAISRDPDVWKNPLEFIPER----------FLPKEGGVEF 455
+ + D W +P EF PER F+P+ GG +
Sbjct: 317 YGSNHDAATWADPQEFRPERFRAWDEDSFNFIPQGGGDHY 356
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 17/100 (17%)
Query: 366 RSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNM 425
R+ V + D EL ++EV R +P P + AR A D +G P G ++++
Sbjct: 264 RAALVQQPDYAELF-----VQEVRRFYPFFPAVV-AR-ASQDFEWEGMAFPEGRQVVLDL 316
Query: 426 WAISRDPDVWKNPLEFIPER----------FLPKEGGVEF 455
+ + D W +P EF PER F+P+ GG +
Sbjct: 317 YGSNHDAATWADPQEFRPERFRAWDEDSFNFIPQGGGDHY 356
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 292 VQSNKQKNLDFVDVLLS--LQGSDKLS---DSDMIAVLWEMIFRGTDTVAVL----IEWI 342
++S K D+ + + ++ ++KL D + +L+ + F V +L ++WI
Sbjct: 233 IKSTYNKLYDYFQSVATPVMEQAEKLGVPKDEAVHNILFAVCFNTFGGVKILFPNTLKWI 292
Query: 343 -LARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPP-GPLLSW 400
LA LH + + + K G E+ + ++ +V+ E LR+ PP P
Sbjct: 293 GLAGENLHTQLAEEIRGAI-KSYGDGNVTLEA-IEQMPLTKSVVYESLRIEPPVPPQYGK 350
Query: 401 ARLAITDTTIDG-YHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERFL 447
A+ T + D + V +G ++DP V+ P E++P+RF+
Sbjct: 351 AKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFV 398
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 47/114 (41%), Gaps = 14/114 (12%)
Query: 382 AAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEF 441
AA+I E++R+ PP LS+ R D I G + G+ + A +RDP+V+ +P F
Sbjct: 267 AAIINEMVRMDPPQ--LSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVF 324
Query: 442 IPERFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEY 495
R P S FG G C G+ + + A L Y
Sbjct: 325 DHTR--PPAASRNLS----------FGLGPHSCAGQIISRAEATTVFAVLAERY 366
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 47/114 (41%), Gaps = 14/114 (12%)
Query: 382 AAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEF 441
AA+I E++R+ PP LS+ R D I G + G+ + A +RDP+V+ +P F
Sbjct: 265 AAIINEMVRMDPPQ--LSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVF 322
Query: 442 IPERFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEY 495
R P S FG G C G+ + + A L Y
Sbjct: 323 DHTR--PPAASRNLS----------FGLGPHSCAGQIISRAEATTVFAVLAERY 364
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 21/156 (13%)
Query: 355 RVHDELDKVVGRSRAVAESDLGELIYLA--------AVIKEVLRLHPPGPLLSWARLAIT 406
+VH+ L + + R+V +S+ GEL A +V+ E LR PP + + A
Sbjct: 316 QVHNRLAEEI---RSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPP--VTAQYGRAKK 370
Query: 407 DTTIDGYHVPRGTTAMVNMWAI----SRDPDVWKNPLEFIPERFLPKEG-GVEFSVLGSD 461
D I+ + A ++ +RDP ++ EF+PERF+ +EG + VL S+
Sbjct: 371 DLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSN 430
Query: 462 --LTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEY 495
T P G + C GK+ + +V + Y
Sbjct: 431 GPETETP-TVGNKQCAGKDFVVLVARLFVIEIFRRY 465
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 21/156 (13%)
Query: 355 RVHDELDKVVGRSRAVAESDLGELIYLA--------AVIKEVLRLHPPGPLLSWARLAIT 406
+VH+ L + + R+V +S+ GEL A +V+ E LR PP + + A
Sbjct: 316 QVHNRLAEEI---RSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPP--VTAQYGRAKK 370
Query: 407 DTTIDGYHVPRGTTAMVNMWAI----SRDPDVWKNPLEFIPERFLPKEG-GVEFSVLGSD 461
D I+ + A ++ +RDP ++ EF+PERF+ +EG + VL S+
Sbjct: 371 DLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSN 430
Query: 462 --LTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEY 495
T P G + C GK+ + +V + Y
Sbjct: 431 GPETETP-TVGNKQCAGKDFVVLVARLFVIEIFRRY 465
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 384 VIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIP 443
V++EVLR P + R+ D TI+G +P GT + + A +RDP + +P F+P
Sbjct: 290 VVEEVLRW--TSPAMHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLP 347
Query: 444 ER 445
R
Sbjct: 348 GR 349
>pdb|1N40|A Chain A, Atomic Structure Of Cyp121, A Mycobacterial P450
pdb|1N4G|A Chain A, Structure Of Cyp121, A Mycobacterial P450, In Complex With
Iodopyrazole
pdb|2IJ5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|B Chain B, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|C Chain C, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|D Chain D, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|E Chain E, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|F Chain F, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ7|A Chain A, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|B Chain B, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|C Chain C, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|D Chain D, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|E Chain E, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|F Chain F, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|3G5F|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|3G5H|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|4G44|A Chain A, Structure Of P450 Cyp121 In Complex With Lead Compound
Mb286, 3-((1h- 1,2,4-Triazol-1-Yl)methyl)aniline
pdb|4G45|A Chain A, Structure Of Cytochrome Cyp121 In Complex With
2-Methylquinolin-6- Amine
pdb|4G46|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-Oxo-4,5,6,7- Tetrahydrobenzofuran-3-Carboxylate
pdb|4G47|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-(1h-1,2,4- Triazol-1-Yl)phenol
pdb|4G48|A Chain A, Structure Of Cyp121 In Complex With
4-(4-Phenoxy-1h-Pyrazol-3-Yl) Benzene-1,3-Diol
Length = 396
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 22/118 (18%)
Query: 381 LAAVIKEVLRLHPPGPLLSWA----RLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWK 436
+ A ++E+LR++ LS+A RLA D + V +G +V + + DP+ +
Sbjct: 266 IPAGVEELLRIN-----LSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 437 NPLEFIPERFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHE 494
NP G +E LA FG G+ CPG LG + +LL +
Sbjct: 321 NP------------GSIELDRPNPTSHLA-FGRGQHFCPGSALGRRHAQIGIEALLKK 365
>pdb|3CY0|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 S237a Mutant
From Mycobacterium Tuberculosis
Length = 396
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 22/118 (18%)
Query: 381 LAAVIKEVLRLHPPGPLLSWA----RLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWK 436
+ A ++E+LR++ LS+A RLA D + V +G +V + + DP+ +
Sbjct: 266 IPAGVEELLRIN-----LSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 437 NPLEFIPERFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHE 494
NP G +E LA FG G+ CPG LG + +LL +
Sbjct: 321 NP------------GSIELDRPNPTSHLA-FGRGQHFCPGSALGRRHAQIGIEALLKK 365
>pdb|3CXV|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 A233g
Mutant From Mycobacterium Tuberculosis
Length = 396
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 22/118 (18%)
Query: 381 LAAVIKEVLRLHPPGPLLSWA----RLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWK 436
+ A ++E+LR++ LS+A RLA D + V +G +V + + DP+ +
Sbjct: 266 IPAGVEELLRIN-----LSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 437 NPLEFIPERFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHE 494
NP G +E LA FG G+ CPG LG + +LL +
Sbjct: 321 NP------------GSIELDRPNPTSHLA-FGRGQHFCPGSALGRRHAQIGIEALLKK 365
>pdb|4G1X|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4-(1h-1,2,4-Triazol-1-Yl)quinolin-6-Amine
pdb|4G2G|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4,4'-(1h-1,2,3-Triazole-1,5-Diyl)diphenol
Length = 395
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 22/118 (18%)
Query: 381 LAAVIKEVLRLHPPGPLLSWA----RLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWK 436
+ A ++E+LR++ LS+A RLA D + V +G +V + + DP+ +
Sbjct: 265 IPAGVEELLRIN-----LSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 319
Query: 437 NPLEFIPERFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHE 494
NP G +E LA FG G+ CPG LG + +LL +
Sbjct: 320 NP------------GSIELDRPNPTSHLA-FGRGQHFCPGSALGRRHAQIGIEALLKK 364
>pdb|3CXZ|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 R386l Mutant
From M. Tuberculosis
Length = 396
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 22/118 (18%)
Query: 381 LAAVIKEVLRLHPPGPLLSWA----RLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWK 436
+ A ++E+LR++ LS+A RLA D + V +G +V + + DP+ +
Sbjct: 266 IPAGVEELLRIN-----LSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 437 NPLEFIPERFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHE 494
NP G +E LA FG G+ CPG LG + +LL +
Sbjct: 321 NP------------GSIELDRPNPTSHLA-FGRGQHFCPGSALGRRHAQIGIEALLKK 365
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 29/182 (15%)
Query: 263 FDPQKIRFRCSKLAPKVNRFVGRIVAQHKVQSNKQKNLDFVDVLLSLQGSD--KLSDSDM 320
DP++ R + A +V F+ +V + + + D + L+S+Q D +LS ++
Sbjct: 176 MDPERAEQR-GQAAREVVNFILDLVERRRTEPGD----DLLSALISVQDDDDGRLSADEL 230
Query: 321 IAVLWEMIFRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIY 380
++ ++ G + LI L+ H D + V R+ A
Sbjct: 231 TSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALV---------RADPSA--------- 272
Query: 381 LAAVIKEVLR-LHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPL 439
L ++E+LR + PP + R A + I G +P+ +T +V A +RDP + +P
Sbjct: 273 LPNAVEEILRYIAPPE---TTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPSQFPDPH 329
Query: 440 EF 441
F
Sbjct: 330 RF 331
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 44/114 (38%), Gaps = 14/114 (12%)
Query: 385 IKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPE 444
I E+LR P + +R+A+ D I G + G V+ A +RDP+V+ +P E
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE 337
Query: 445 RFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWL 498
R S FG G CPG L V ++L L
Sbjct: 338 R--------------SPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGL 377
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 44/114 (38%), Gaps = 14/114 (12%)
Query: 385 IKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPE 444
I E+LR P + +R+A+ D I G + G V+ A +RDP+V+ +P E
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE 337
Query: 445 RFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWL 498
R S FG G CPG L V ++L L
Sbjct: 338 R--------------SPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGL 377
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 44/114 (38%), Gaps = 14/114 (12%)
Query: 385 IKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPE 444
I E+LR P + +R+A+ D I G + G V+ A +RDP+V+ +P E
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE 337
Query: 445 RFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWL 498
R S FG G CPG L V ++L L
Sbjct: 338 R--------------SPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGL 377
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 44/114 (38%), Gaps = 14/114 (12%)
Query: 385 IKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPE 444
I E+LR P + +R+A+ D I G + G V+ A +RDP+V+ +P E
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE 337
Query: 445 RFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWL 498
R S FG G CPG L V ++L L
Sbjct: 338 R--------------SPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGL 377
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 44/114 (38%), Gaps = 14/114 (12%)
Query: 385 IKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPE 444
I E+LR P + +R+A+ D I G + G V+ A +RDP+V+ +P E
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE 337
Query: 445 RFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWL 498
R S FG G CPG L V ++L L
Sbjct: 338 R--------------SPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGL 377
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 44/114 (38%), Gaps = 14/114 (12%)
Query: 385 IKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPE 444
I E+LR P + +R+A+ D I G + G V+ A +RDP+V+ +P E
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE 337
Query: 445 RFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWL 498
R S FG G CPG L V ++L L
Sbjct: 338 R--------------SPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGL 377
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 44/114 (38%), Gaps = 14/114 (12%)
Query: 385 IKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPE 444
I E+LR P + +R+A+ D I G + G V+ A +RDP+V+ +P E
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE 337
Query: 445 RFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWL 498
R S FG G CPG L V ++L L
Sbjct: 338 R--------------SPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGL 377
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 63/155 (40%), Gaps = 29/155 (18%)
Query: 327 MIFRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIK 386
++ G +TVA + W L D Q RV + + + A +
Sbjct: 218 LLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL------------------AAFQ 259
Query: 387 EVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERF 446
E LRL+PP +L+ R + +P+GTT +++ + R + F PERF
Sbjct: 260 EALRLYPPAWILT--RRLERPLLLGEDRLPQGTTLVLSPYVTQRL--YFPEGEAFQPERF 315
Query: 447 LPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGL 481
L + G PFG G+R+C G++ L
Sbjct: 316 LAERGTPSGRYF-------PFGLGQRLCLGRDFAL 343
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 76/182 (41%), Gaps = 29/182 (15%)
Query: 263 FDPQKIRFRCSKLAPKVNRFVGRIVAQHKVQSNKQKNLDFVDVLLSLQGSD--KLSDSDM 320
DP++ R + A +V F+ +V + + + D + L+ +Q D +LS ++
Sbjct: 177 MDPERAEQR-GQAAREVVNFILDLVERRRTEPGD----DLLSALIRVQDDDDGRLSADEL 231
Query: 321 IAVLWEMIFRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIY 380
++ ++ G +T LI L+ H D + V +
Sbjct: 232 TSIALVLLLAGFETSVSLIGIGTYLLLTHPDQLALVRRDPSA------------------ 273
Query: 381 LAAVIKEVLR-LHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPL 439
L ++E+LR + PP + R A + I G +P+ +T +V A +RDP + +P
Sbjct: 274 LPNAVEEILRYIAPPE---TTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPH 330
Query: 440 EF 441
F
Sbjct: 331 RF 332
>pdb|3CY1|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 S279a
Mutant From M. Tuberculosis
Length = 396
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 22/118 (18%)
Query: 381 LAAVIKEVLRLHPPGPLLSWA----RLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWK 436
+ A ++E+LR++ L++A RLA D + V +G +V + + DP+ +
Sbjct: 266 IPAGVEELLRIN-----LAFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 437 NPLEFIPERFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHE 494
NP G +E LA FG G+ CPG LG + +LL +
Sbjct: 321 NP------------GSIELDRPNPTSHLA-FGRGQHFCPGSALGRRHAQIGIEALLKK 365
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 17/110 (15%)
Query: 401 ARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERFLPKEGGVEFSVLGS 460
+RLA D I G + G +V+M + + DP V+K+P ER G+
Sbjct: 297 SRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVER-------------GA 343
Query: 461 DLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPSAQNTVDLSEV 510
LA FG G C G+NL + +L + +PS + V + +V
Sbjct: 344 RHHLA-FGFGPHQCLGQNLARMELQIVFDTL---FRRIPSLRLAVPMEDV 389
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 76/182 (41%), Gaps = 29/182 (15%)
Query: 263 FDPQKIRFRCSKLAPKVNRFVGRIVAQHKVQSNKQKNLDFVDVLLSLQGSD--KLSDSDM 320
DP++ R + A +V F+ +V + + + D + L+ +Q D +LS ++
Sbjct: 176 MDPERAEQR-GQAAREVVNFILDLVERRRTEPGD----DLLSALIRVQDDDDGRLSADEL 230
Query: 321 IAVLWEMIFRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIY 380
++ ++ G ++ LI L+ H D + V +
Sbjct: 231 TSIALVLLLAGFESSVSLIGIGTYLLLTHPDQLALVRRDPSA------------------ 272
Query: 381 LAAVIKEVLR-LHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPL 439
L ++E+LR + PP + R A + I G +P+ +T +V A +RDP + +P
Sbjct: 273 LPNAVEEILRYIAPPE---TTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPH 329
Query: 440 EF 441
F
Sbjct: 330 RF 331
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 15/99 (15%)
Query: 385 IKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISR--DPDVWKNPLEFI 442
+E LRL+PP +L+ R + +P GTT +++ + R PD F
Sbjct: 258 FQEALRLYPPAWILT--RRLERPLLLGEDRLPPGTTLVLSPYVTQRLHFPDGEA----FR 311
Query: 443 PERFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGL 481
PERFL + G PFG G+R+C G++ L
Sbjct: 312 PERFLEERGTPSGRYF-------PFGLGQRLCLGRDFAL 343
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 76/182 (41%), Gaps = 29/182 (15%)
Query: 263 FDPQKIRFRCSKLAPKVNRFVGRIVAQHKVQSNKQKNLDFVDVLLSLQGSD--KLSDSDM 320
DP++ R + A +V F+ +V + + + D + L+ +Q D +LS ++
Sbjct: 177 MDPERAEQR-GQAAREVVNFILDLVERRRTEPGD----DLLSALIRVQDDDDGRLSADEL 231
Query: 321 IAVLWEMIFRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIY 380
++ ++ G ++ LI L+ H D + V +
Sbjct: 232 TSIALVLLLAGFESSVSLIGIGTYLLLTHPDQLALVRRDPSA------------------ 273
Query: 381 LAAVIKEVLR-LHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPL 439
L ++E+LR + PP + R A + I G +P+ +T +V A +RDP + +P
Sbjct: 274 LPNAVEEILRYIAPPE---TTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPH 330
Query: 440 EF 441
F
Sbjct: 331 RF 332
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 381 LAAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLE 440
+ ++ E++R P L R AI D+ + G + +G ++ ++ +RD +V P E
Sbjct: 298 VETMVPEIIRWQTP--LAHMRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEE 355
Query: 441 FIPERFLPKE 450
FI +R P++
Sbjct: 356 FIIDRPRPRQ 365
>pdb|4FB2|A Chain A, Crystal Structure Of Substrate-Free P450cin
pdb|4FB2|B Chain B, Crystal Structure Of Substrate-Free P450cin
pdb|4FB2|C Chain C, Crystal Structure Of Substrate-Free P450cin
pdb|4FB2|D Chain D, Crystal Structure Of Substrate-Free P450cin
pdb|4FYZ|A Chain A, Crystal Structure Of Nitrosyl Cytochrome P450cin
pdb|4FYZ|B Chain B, Crystal Structure Of Nitrosyl Cytochrome P450cin
pdb|4FMX|A Chain A, Crystal Structure Of Substrate-Bound P450cin
pdb|4FMX|B Chain B, Crystal Structure Of Substrate-Bound P450cin
Length = 398
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 21/141 (14%)
Query: 305 VLLSLQGSDKLSDSDMIAVLWEMIFRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVV 364
V++S + LS+ D+I ++ G D A + + RL ++
Sbjct: 207 VIMSKIDGESLSEDDLIGFFTILLLGGIDNTARFLSSVFWRLAWDIEL------------ 254
Query: 365 GRSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVN 424
R R +A +L + + E+LR + P + RL + T+ + G TAM+
Sbjct: 255 -RRRLIAHPEL-----IPNAVDELLRFYGPAMV---GRLVTQEVTVGDITMKPGQTAMLW 305
Query: 425 MWAISRDPDVWKNPLEFIPER 445
SRD + +P + ER
Sbjct: 306 FPIASRDRSAFDSPDNIVIER 326
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 14/107 (13%)
Query: 385 IKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPE 444
++EVLR P P+ + R+A D ++G +P GT + RDP V+ + +
Sbjct: 280 VEEVLRWSPTLPVTA-TRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFAD-----AD 333
Query: 445 RFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASL 491
RF + +V ++A FG G C G L ++ VA+L
Sbjct: 334 RF-------DITVKREAPSIA-FGGGPHFCLGTALARLELTEAVAAL 372
>pdb|1T2B|A Chain A, Crystal Structure Of Cytochrome P450cin Complexed With Its
Substrate 1,8-Cineole
pdb|1T2B|B Chain B, Crystal Structure Of Cytochrome P450cin Complexed With Its
Substrate 1,8-Cineole
Length = 397
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 21/141 (14%)
Query: 305 VLLSLQGSDKLSDSDMIAVLWEMIFRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVV 364
V++S + LS+ D+I ++ G D A + + RL ++
Sbjct: 206 VIMSKIDGESLSEDDLIGFFTILLLGGIDNTARFLSSVFWRLAWDIEL------------ 253
Query: 365 GRSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVN 424
R R +A +L + + E+LR + P + RL + T+ + G TAM+
Sbjct: 254 -RRRLIAHPEL-----IPNAVDELLRFYGPAMV---GRLVTQEVTVGDITMKPGQTAMLW 304
Query: 425 MWAISRDPDVWKNPLEFIPER 445
SRD + +P + ER
Sbjct: 305 FPIASRDRSAFDSPDNIVIER 325
>pdb|3CXX|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 F338h From M.
Tuberculosis
Length = 396
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 22/118 (18%)
Query: 381 LAAVIKEVLRLHPPGPLLSWA----RLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWK 436
+ A ++E+LR++ LS+A RLA D + V +G +V + + DP+ +
Sbjct: 266 IPAGVEELLRIN-----LSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 437 NPLEFIPERFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHE 494
NP G +E LA G G+ CPG LG + +LL +
Sbjct: 321 NP------------GSIELDRPNPTSHLA-HGRGQHFCPGSALGRRHAQIGIEALLKK 365
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 14/107 (13%)
Query: 385 IKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPE 444
++EVLR P P+ + R+A D ++G +P GT + RDP V+ + +
Sbjct: 290 VEEVLRWSPTLPVTA-TRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFAD-----AD 343
Query: 445 RFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASL 491
RF + +V ++A FG G C G L ++ VA+L
Sbjct: 344 RF-------DITVKREAPSIA-FGGGPHFCLGTALARLELTEAVAAL 382
>pdb|3BDZ|A Chain A, The Role Of Asn 242 In P450cin
pdb|3BDZ|B Chain B, The Role Of Asn 242 In P450cin
pdb|3BE0|A Chain A, The Role Of Asn 242 In P450cin
pdb|3BE0|B Chain B, The Role Of Asn 242 In P450cin
Length = 397
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 21/141 (14%)
Query: 305 VLLSLQGSDKLSDSDMIAVLWEMIFRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVV 364
V++S + LS+ D+I ++ G D A + + RL ++
Sbjct: 206 VIMSKIDGESLSEDDLIGFFTILLLGGIDATARFLSSVFWRLAWDIEL------------ 253
Query: 365 GRSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVN 424
R R +A +L + + E+LR + P + RL + T+ + G TAM+
Sbjct: 254 -RRRLIAHPEL-----IPNAVDELLRFYGPAMV---GRLVTQEVTVGDITMKPGQTAMLW 304
Query: 425 MWAISRDPDVWKNPLEFIPER 445
SRD + +P + ER
Sbjct: 305 FPIASRDRSAFDSPDNIVIER 325
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 75/182 (41%), Gaps = 29/182 (15%)
Query: 263 FDPQKIRFRCSKLAPKVNRFVGRIVAQHKVQSNKQKNLDFVDVLLSLQGSD--KLSDSDM 320
DP++ R + A +V F+ +V + + + D + L+ +Q D +LS ++
Sbjct: 176 MDPERAEQR-GQAAREVVNFILDLVERRRTEPGD----DLLSALIRVQDDDDGRLSADEL 230
Query: 321 IAVLWEMIFRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIY 380
++ ++ G + LI L+ H D + V +
Sbjct: 231 TSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPSA------------------ 272
Query: 381 LAAVIKEVLR-LHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPL 439
L ++E+LR + PP + R A + I G +P+ +T +V A +RDP + +P
Sbjct: 273 LPNAVEEILRYIAPPE---TTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPH 329
Query: 440 EF 441
F
Sbjct: 330 RF 331
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 381 LAAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLE 440
L +++E +R P+ + R A TDT + G + G M+N A + DP + P +
Sbjct: 322 LPGIVEEAIRWT--TPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRK 379
Query: 441 FIPER 445
F P R
Sbjct: 380 FDPTR 384
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 77/202 (38%), Gaps = 36/202 (17%)
Query: 310 QGSDKLSDSDMIAVLWEMIFRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRA 369
+ D L+D+++++ L M+ G +T LI + L H + RA
Sbjct: 222 ENGDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPE---------------QRA 266
Query: 370 VAESDLGELIYLAAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAIS 429
+ S E +AV++E LR P + R A D + +P G +V+ A+
Sbjct: 267 LVLSGEAEW---SAVVEETLRFSTPTSHV-LIRFAAEDVPVGDRVIPAGDALIVSYGALG 322
Query: 430 RDPDVWKNPLEFIPERF-LPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWV 488
RD + P +RF L + G FG G VCPG L +
Sbjct: 323 RD-ERAHGPTA---DRFDLTRTSGNRH---------ISFGHGPHVCPGAALSRMEAGVAL 369
Query: 489 ASLLHEYAWLPSAQNTVDLSEV 510
+L YA P V +E+
Sbjct: 370 PAL---YARFPHLDLAVPAAEL 388
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 75/182 (41%), Gaps = 29/182 (15%)
Query: 263 FDPQKIRFRCSKLAPKVNRFVGRIVAQHKVQSNKQKNLDFVDVLLSLQGSD--KLSDSDM 320
DP++ R + A +V F+ +V + + + D + L+ +Q D +LS ++
Sbjct: 177 MDPERAEQR-GQAAREVVNFILDLVERRRTEPGD----DLLSALIRVQDDDDGRLSADEL 231
Query: 321 IAVLWEMIFRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIY 380
++ ++ G + LI L+ H D + V +
Sbjct: 232 TSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPSA------------------ 273
Query: 381 LAAVIKEVLR-LHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPL 439
L ++E+LR + PP + R A + I G +P+ +T +V A +RDP + +P
Sbjct: 274 LPNAVEEILRYIAPPE---TTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPH 330
Query: 440 EF 441
F
Sbjct: 331 RF 332
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 19/130 (14%)
Query: 381 LAAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLE 440
++ V++E+LR + R+A D + G + G +V++ ++RD ++NP
Sbjct: 276 VSGVVEELLRFTSVSDHI--VRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDI 333
Query: 441 FIPERFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWLPS 500
F R G FG G C G+NL + + L +A +P
Sbjct: 334 FDARRNARHHVG--------------FGHGIHQCLGQNLARAELEIALGGL---FARIPG 376
Query: 501 AQNTVDLSEV 510
+ V L EV
Sbjct: 377 LRLAVPLDEV 386
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 99/263 (37%), Gaps = 56/263 (21%)
Query: 275 LAPKVNRFVGRIVAQ--------HKVQSNKQKNLDFVDVLLSLQGSD----KLSDSDMIA 322
L P+V+ +VA H V +++N DVL L ++ +LS +++A
Sbjct: 187 LVPRVDEETKTLVASVTEGLALLHGVLDERRRNPLENDVLTMLLQAEADGSRLSTKELVA 246
Query: 323 VLWEMIFRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLA 382
++ +I GTDT LI + + L+ + V E + + L E++
Sbjct: 247 LVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAE--------PGLMRNALDEVLRFE 298
Query: 383 AVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFI 442
+++ + R A D G + +G + + + RD V+ P F
Sbjct: 299 NILR-----------IGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFD 347
Query: 443 PERFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHE-------- 494
R + +LA +G G VCPG +L V ++
Sbjct: 348 VRR-------------DTSASLA-YGRGPHVCPGVSLARLEAEIAVGTIFRRFPEMKLKE 393
Query: 495 ---YAWLPSAQNTVDLSEVLRLS 514
+ + P+ +N L+ +L+ S
Sbjct: 394 TPVFGYHPAFRNIESLNVILKPS 416
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 22/99 (22%)
Query: 385 IKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPE 444
++E LR PP ++ R+ I + G V + + +RD +V+K+P FIP+
Sbjct: 244 VEEALRFSPP--VMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPD 301
Query: 445 RFLPKEGGVEFSVLGSDLTLAP---FGSGRRVCPGKNLG 480
R T P FGSG +C G L
Sbjct: 302 R-----------------TPNPHLSFGSGIHLCLGAPLA 323
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 99/263 (37%), Gaps = 56/263 (21%)
Query: 275 LAPKVNRFVGRIVAQ--------HKVQSNKQKNLDFVDVLLSLQGSD----KLSDSDMIA 322
L P+V+ +VA H V +++N DVL L ++ +LS +++A
Sbjct: 187 LVPRVDEETKTLVASVTEGLALLHGVLDERRRNPLENDVLTMLLQAEADGSRLSTKELVA 246
Query: 323 VLWEMIFRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLA 382
++ +I GTDT LI + + L+ + V E + + L E++
Sbjct: 247 LVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAE--------PGLMRNALDEVLRFD 298
Query: 383 AVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFI 442
+++ + R A D G + +G + + + RD V+ P F
Sbjct: 299 NILR-----------IGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFD 347
Query: 443 PERFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHE-------- 494
R + +LA +G G VCPG +L V ++
Sbjct: 348 VRR-------------DTSASLA-YGRGPHVCPGVSLARLEAEIAVGTIFRRFPEMKLKE 393
Query: 495 ---YAWLPSAQNTVDLSEVLRLS 514
+ + P+ +N L+ +L+ S
Sbjct: 394 TPVFGYHPAFRNIESLNVILKPS 416
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 71/169 (42%), Gaps = 24/169 (14%)
Query: 341 WILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSW 400
W++ L+ H + V +E+ G+ + E ++ +V+ E LRL +
Sbjct: 275 WVMGYLLTHPEALRAVREEIQG--GKHLRLEERQKNTPVF-DSVLWETLRL-------TA 324
Query: 401 ARLAITDTTIDG---------YHVPRGTTAMVNMW-AISRDPDVWKNPLEFIPERFL--P 448
A L D T D YH+ RG V + + DP + + P F +RFL
Sbjct: 325 AALITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNAD 384
Query: 449 KEGGVEFSVLGSDLTL--APFGSGRRVCPGKNLGLTTVSFWVASLLHEY 495
+ +F G+ + P+G+ +CPG++ + + V ++L +
Sbjct: 385 RTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRF 433
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 401 ARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERFLPKEGGVEFSVLGS 460
AR+A+ D + G + G V+ A +RDPDV+ +P +R
Sbjct: 297 ARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDR-------------DP 343
Query: 461 DLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHEYAWL 498
+ LA +G+G C G L V +LL L
Sbjct: 344 NPHLA-YGNGHHFCTGAVLARMQTELLVDTLLERLPGL 380
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 58/134 (43%), Gaps = 23/134 (17%)
Query: 307 LSLQGSDKLSDSDMIAVLWEMIFRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVVGR 366
+S + D+LS +++A+ ++ G +T LI + L+ H D +
Sbjct: 213 VSDEDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPD--------------Q 258
Query: 367 SRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSWA--RLAITDTTIDGYHVPRGTTAMVN 424
+ +AE + +++ ++E LR P +S A R D T G +P G M+
Sbjct: 259 RKLLAE----DPSLISSAVEEFLRFDSP---VSQAPIRFTAEDVTYSGVTIPAGEMVMLG 311
Query: 425 MWAISRDPDVWKNP 438
+ A +RD D P
Sbjct: 312 LAAANRDADWMPEP 325
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 58/143 (40%), Gaps = 32/143 (22%)
Query: 374 DLGELIYLAAVIKEVL-RLHP-PG-------PLLSW---------ARLAITDTTIDGYHV 415
++G+++YL +E++ R+ PG LL W AR+A+ D + G +
Sbjct: 252 NVGQMLYLLLTRRELMARMRERPGARGTALDELLRWISHRTSVGLARIALEDVEVHGTRI 311
Query: 416 PRGTTAMVNMWAISRDPDVWKNPLEFIPERFLPKEGGVEFSVLGSDLTLAPFGSGRRVCP 475
G V+ A +RDPDV+ +P +R + LA +G+G C
Sbjct: 312 AAGEPVYVSYLAANRDPDVFPDPDRIDLDR-------------DPNPHLA-YGNGHHFCT 357
Query: 476 GKNLGLTTVSFWVASLLHEYAWL 498
G L V +LL L
Sbjct: 358 GAVLARMQTELLVDTLLERLPGL 380
>pdb|3CXY|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 P346l
Mutant From M. Tuberculosis
Length = 396
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 22/118 (18%)
Query: 381 LAAVIKEVLRLHPPGPLLSWA----RLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWK 436
+ A ++E+LR++ LS+A RLA D + V +G +V + + DP+ +
Sbjct: 266 IPAGVEELLRIN-----LSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 320
Query: 437 NPLEFIPERFLPKEGGVEFSVLGSDLTLAPFGSGRRVCPGKNLGLTTVSFWVASLLHE 494
NP G +E LA FG G+ C G LG + +LL +
Sbjct: 321 NP------------GSIELDRPNPTSHLA-FGRGQHFCLGSALGRRHAQIGIEALLKK 365
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 57/151 (37%), Gaps = 30/151 (19%)
Query: 342 ILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSWA 401
LA+ VL V DEL R ES A ++E++R PP + +
Sbjct: 262 FLAKAVLTLRAHRDVLDEL-------RTTPES-------TPAAVEELMRYDPP--VQAVT 305
Query: 402 RLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEFIPERFLPKEGGVEFSVLGSD 461
R A D + + +PRG+ + + + +RDP + +P R ++ G
Sbjct: 306 RWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVHRAAERQVG--------- 356
Query: 462 LTLAPFGSGRRVCPGKNLGLTTVSFWVASLL 492
FG G C G L + +LL
Sbjct: 357 -----FGLGIHYCLGATLARAEAEIGLRALL 382
>pdb|1UED|A Chain A, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis.
pdb|1UED|B Chain B, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis
Length = 406
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 73/161 (45%), Gaps = 28/161 (17%)
Query: 280 NRFVGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDKLSDSDMIAVLWEMIFRGTDTVAVLI 339
NR++ ++A+ + + D + ++ D ++D ++ + +I G +TVA +I
Sbjct: 200 NRYLDNLLARQRADPD-----DGLLGMIVRDHGDNVTDEELKGLCTALILGGVETVAGMI 254
Query: 340 EW-ILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELI-YLAAVIKEVLRLHPPGPL 397
+ +LA L D ++ +++ S AE + EL+ YL+ V P P
Sbjct: 255 GFGVLALL----DNPGQI-----ELLFESPEKAERVVNELVRYLSPV-------QAPNP- 297
Query: 398 LSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNP 438
RLAI D IDG + G + ++ +RD + +P
Sbjct: 298 ----RLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDP 334
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 66/140 (47%), Gaps = 13/140 (9%)
Query: 359 ELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSWARLAITDTTI---DG--Y 413
+ ++ V ++ + + L L +V+ E LRL P ++ R + D + DG +
Sbjct: 297 QAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRL-TAAPFIT--REVVVDLAMPMADGREF 353
Query: 414 HVPRGTTAMV-NMWAISRDPDVWKNPLEFIPERFLPKEGG--VEFSVLGSDLT--LAPFG 468
++ RG ++ + RDP+++ +P F RFL +G +F G L P+G
Sbjct: 354 NLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWG 413
Query: 469 SGRRVCPGKNLGLTTVSFWV 488
+G C G++ + ++ +V
Sbjct: 414 AGHNHCLGRSYAVNSIKQFV 433
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 313 DKLSDSDMIAVLWEMIFRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAE 372
D+LS +++A+ ++ G +T LI + L+ H D + + +AE
Sbjct: 219 DRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPD--------------QRKLLAE 264
Query: 373 SDLGELIYLAAVIKEVLRLHPPGPLLSWA--RLAITDTTIDGYHVPRGTTAMVNMWAISR 430
+ +++ ++E LR P +S A R D T G +P G M+ + A +R
Sbjct: 265 ----DPSLISSAVEEFLRFDSP---VSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANR 317
Query: 431 DPDVWKNP 438
D D P
Sbjct: 318 DADWMPEP 325
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 65/138 (47%), Gaps = 13/138 (9%)
Query: 361 DKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPGPLLSWARLAITDTTI---DG--YHV 415
++ V ++ + + L L +V+ E LRL P ++ R + D + DG +++
Sbjct: 311 EQPVSQTTTLPQKVLDSTPVLDSVLSESLRL-TAAPFIT--REVVVDLAMPMADGREFNL 367
Query: 416 PRGTTAMV-NMWAISRDPDVWKNPLEFIPERFLPKEGG--VEFSVLGSDLT--LAPFGSG 470
RG ++ + RDP+++ +P F RFL +G +F G L P+G+G
Sbjct: 368 RRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAG 427
Query: 471 RRVCPGKNLGLTTVSFWV 488
C G++ + ++ +V
Sbjct: 428 HNHCLGRSYAVNSIKQFV 445
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/167 (18%), Positives = 69/167 (41%), Gaps = 27/167 (16%)
Query: 278 KVNRFVGRIVAQHKVQSNKQKNLDFVDVLLSLQGSD--KLSDSDMIAVLWEMIFRGTDTV 335
+++ ++ R++ + Q + D + L+ D +L+ +++ + ++ G +T
Sbjct: 213 EMSGYLSRLIDSKRGQDGE----DLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETT 268
Query: 336 AVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPG 395
LI + L+ H D + + ++ L ++E+LR G
Sbjct: 269 VNLIANGMYALLSHPDQLAALR------------------ADMTLLDGAVEEMLRYE--G 308
Query: 396 PLLSWA-RLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEF 441
P+ S R + +DG +P G T +V + R P+ + +P F
Sbjct: 309 PVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRF 355
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/167 (18%), Positives = 69/167 (41%), Gaps = 27/167 (16%)
Query: 278 KVNRFVGRIVAQHKVQSNKQKNLDFVDVLLSLQGSD--KLSDSDMIAVLWEMIFRGTDTV 335
+++ ++ R++ + Q + D + L+ D +L+ +++ + ++ G +T
Sbjct: 213 EMSGYLSRLIDSKRGQDGE----DLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETT 268
Query: 336 AVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPG 395
LI + L+ H D + + ++ L ++E+LR G
Sbjct: 269 VNLIANGMYALLSHPDQLAALR------------------ADMTLLDGAVEEMLRYE--G 308
Query: 396 PLLSWA-RLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEF 441
P+ S R + +DG +P G T +V + R P+ + +P F
Sbjct: 309 PVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRF 355
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/167 (18%), Positives = 69/167 (41%), Gaps = 27/167 (16%)
Query: 278 KVNRFVGRIVAQHKVQSNKQKNLDFVDVLLSLQGSD--KLSDSDMIAVLWEMIFRGTDTV 335
+++ ++ R++ + Q + D + L+ D +L+ +++ + ++ G +T
Sbjct: 213 EMSGYLSRLIDSKRGQDGE----DLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETT 268
Query: 336 AVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLRLHPPG 395
LI + L+ H D + + ++ L ++E+LR G
Sbjct: 269 VNLIANGMYALLSHPDQLAALR------------------ADMTLLDGAVEEMLRYE--G 308
Query: 396 PLLSWA-RLAITDTTIDGYHVPRGTTAMVNMWAISRDPDVWKNPLEF 441
P+ S R + +DG +P G T +V + R P+ + +P F
Sbjct: 309 PVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRF 355
>pdb|3O8O|B Chain B, Structure Of Phosphofructokinase From Saccharomyces
Cerevisiae
pdb|3O8O|D Chain D, Structure Of Phosphofructokinase From Saccharomyces
Cerevisiae
pdb|3O8O|F Chain F, Structure Of Phosphofructokinase From Saccharomyces
Cerevisiae
pdb|3O8O|H Chain H, Structure Of Phosphofructokinase From Saccharomyces
Cerevisiae
Length = 766
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 10/87 (11%)
Query: 239 ALVDEGYEILGILNWTDHLPWLADFDPQKIRFRCSKLAPKVNRFVGRIVAQHKVQSNKQK 298
LV G E + +W D W A+ RC + + R +G AQH +++
Sbjct: 45 GLVRGGPEYIKEFHWEDVRGWSAEGGTNIGTARCMEFKKREGRLLG---AQHLIEAG--- 98
Query: 299 NLDFVDVLLSLQGSDKLSDSDMIAVLW 325
VD L+ G L+ +D+ W
Sbjct: 99 ----VDALIVCGGDGSLTGADLFRSEW 121
>pdb|1LFK|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LG9|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LGF|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
Length = 398
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/181 (18%), Positives = 78/181 (43%), Gaps = 33/181 (18%)
Query: 271 RCSKLAPKVNRFVGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDKLSDSDMIAVLWEMIFR 330
R + L K +R++ ++A+ + K+ + +++ G D +D ++ +++
Sbjct: 182 RRAALGDKFSRYLLAMIARER----KEPGEGMIGAVVAEYGDDA-TDEELRGFCVQVMLA 236
Query: 331 GTDTVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVAESDLGELIYLAAVIKEVLR 390
G D ++ +I + ++ H + ++D G ++ A+ + ELI V
Sbjct: 237 GDDNISGMIGLGVLAMLRHPE-------QIDAFRGDEQS-AQRAVDELIRYLTV------ 282
Query: 391 LHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRDP---------DVWKNPLEF 441
P R+A D T+ G + +G + + ++ A +RDP DV + P+
Sbjct: 283 -----PYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTREPIPH 337
Query: 442 I 442
+
Sbjct: 338 V 338
>pdb|3GWD|A Chain A, Closed Crystal Structure Of Cyclohexanone Monooxygenase
pdb|3GWF|A Chain A, Open Crystal Structure Of Cyclohexanone Monooxygenase
Length = 540
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 22/33 (66%)
Query: 117 VTSNPDVAKEILNSSVFADRPVKESAYSLMFNR 149
+ +P+ A++++ +FA RP+ +S Y ++NR
Sbjct: 310 IIEDPETARKLMPKGLFAKRPLCDSGYYEVYNR 342
>pdb|3UCL|A Chain A, Cyclohexanone-Bound Crystal Structure Of Cyclohexanone
Monooxygenase In The Rotated Conformation
Length = 573
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 22/33 (66%)
Query: 117 VTSNPDVAKEILNSSVFADRPVKESAYSLMFNR 149
+ +P+ A++++ +FA RP+ +S Y ++NR
Sbjct: 343 IIEDPETARKLMPKGLFAKRPLCDSGYYEVYNR 375
>pdb|3J20|F Chain F, Promiscuous Behavior Of Proteins In Archaeal Ribosomes
Revealed By Cryo-em: Implications For Evolution Of
Eukaryotic Ribosomes (30s Ribosomal Subunit)
Length = 236
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 11/93 (11%)
Query: 60 GSSSFVKAKPIPGPRGLP-VIGNMNLMMSLSHRKIAAAAESCKAKRLMAFSLGDTRVIVT 118
G V+ + IPGPRGL VIG++ +KI A + + + + G+TR V
Sbjct: 147 GKEGSVRVRLIPGPRGLGLVIGDVG-------KKILRLA---GVQDVWSQTFGETRTTVN 196
Query: 119 SNPDVAKEILNSSVFADRPVKESAYSLMFNRAI 151
V + N++ A P Y ++ RA+
Sbjct: 197 FAKAVFNALYNTNRVAISPEMIERYGIVVGRAM 229
>pdb|2FUR|A Chain A, Crystal Structure Of A Putative Fmn-Binding Protein
(Ta1372) From Thermoplasma Acidophilum At 1.80 A
Resolution
pdb|2FUR|B Chain B, Crystal Structure Of A Putative Fmn-Binding Protein
(Ta1372) From Thermoplasma Acidophilum At 1.80 A
Resolution
Length = 209
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/56 (23%), Positives = 28/56 (50%)
Query: 188 ASQMVATFAGYKQGFCVREALKRASLNNMMCSVFGREYKLDSLNDEVKELRALVDE 243
Q++A G + + +K S+N + +FGR Y++D +++ R L ++
Sbjct: 75 TGQLIAISLLEINGIVLAKEIKNNSINYVSALIFGRPYEIDDTEKKIEVFRLLTEK 130
>pdb|3OFU|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|D Chain D, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|E Chain E, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|F Chain F, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
Length = 396
Score = 28.9 bits (63), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 38/196 (19%), Positives = 73/196 (37%), Gaps = 34/196 (17%)
Query: 265 PQKIRFRCSKLAPKVNRFVGRIVAQHKVQSNKQKNLDFVDVLLSLQGSDKLSD------- 317
P + R R +L ++ R G + + Q+ F++ ++ G D S
Sbjct: 156 PLEDRPRLRQLGVQLTRPDGSMTVEQLKQAADDYLWPFIEKRMAQPGDDLFSRILSEPVG 215
Query: 318 ------SDMIAVLWEMIFRGTDTVAVLIEWILARLVLHCDVQSRVHDELDKVVGRSRAVA 371
+ + ++F G DTVA +I + L H + Q + + D
Sbjct: 216 GRPWTVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPD---------- 265
Query: 372 ESDLGELIYLAAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPRGTTAMVNMWAISRD 431
+ A E++R + P ++ +R A+ D DG + +G + + D
Sbjct: 266 --------LIPAAADELMRRY---PTVAVSRNAVADVDADGVTIRKGDLVYLPSVLHNLD 314
Query: 432 PDVWKNPLEFIPERFL 447
P ++ P E +R L
Sbjct: 315 PASFEAPEEVRFDRGL 330
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.136 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,406,666
Number of Sequences: 62578
Number of extensions: 639461
Number of successful extensions: 1679
Number of sequences better than 100.0: 175
Number of HSP's better than 100.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 1400
Number of HSP's gapped (non-prelim): 196
length of query: 538
length of database: 14,973,337
effective HSP length: 103
effective length of query: 435
effective length of database: 8,527,803
effective search space: 3709594305
effective search space used: 3709594305
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 54 (25.4 bits)