BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009293
(538 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|302143800|emb|CBI22661.3| unnamed protein product [Vitis vinifera]
Length = 626
Score = 636 bits (1640), Expect = e-180, Method: Compositional matrix adjust.
Identities = 308/433 (71%), Positives = 360/433 (83%), Gaps = 3/433 (0%)
Query: 63 RNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGAN 122
+NEE V NRKGWIHFVGIGGSGLSALA LALKQGFEVSGSD+VWSS+++GL E GA
Sbjct: 40 KNEESFV-LGNRKGWIHFVGIGGSGLSALAMLALKQGFEVSGSDIVWSSFLDGLKETGAQ 98
Query: 123 LHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYN 182
LH+GHS SNIQ N+GS P+A+V SSAIPQDN+EILHAKSVG+P+YKR WL KLTE YN
Sbjct: 99 LHLGHSESNIQRNNGSSLPDAIVVSSAIPQDNLEILHAKSVGIPVYKRGNWLGKLTEHYN 158
Query: 183 LIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYD 242
LIAVSG+HGKSTTASMLAYVLK+MGDDLTA+VGA VPQF G+I G G+NFVLEADEYD
Sbjct: 159 LIAVSGTHGKSTTASMLAYVLKSMGDDLTAVVGAQVPQFGGGNIMSGSGRNFVLEADEYD 218
Query: 243 GCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLL 302
CFLGL P +AVVTN+DWEHVDIF DE+AVK+IFRRFLKQIRVGGHL++CGDS A SLL
Sbjct: 219 CCFLGLLPYIAVVTNVDWEHVDIFPDEEAVKAIFRRFLKQIRVGGHLILCGDSAGACSLL 278
Query: 303 DQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYIL 362
D ++ T +S G +S +SD G Y+I T+G S N+W+A S+ PN QGGSD++L
Sbjct: 279 DDTEESTVADHSSGKLSTLNSDKCSDG--YRITTFGISRTNEWHALSIRPNSQGGSDFVL 336
Query: 363 CERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRR 422
C RG P+A I+LQIPGVHNVLNSLAVIATV+ L+ D RQS+ESI C+K+ L+ F+GVSRR
Sbjct: 337 CHRGYPVANITLQIPGVHNVLNSLAVIATVMALVSDGRQSYESINCVKIHLNNFVGVSRR 396
Query: 423 FDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFAN 482
F+LIGT+ GC IYDD+AHHPTEVRAVLQAARQRFP KAL+ VFQPHTYSRL LK DFA
Sbjct: 397 FELIGTVCGCLIYDDYAHHPTEVRAVLQAARQRFPLKALLVVFQPHTYSRLAALKSDFAT 456
Query: 483 ALSEADQVVVSAV 495
A S+ADQV+V+ +
Sbjct: 457 AFSDADQVLVTEI 469
>gi|359490615|ref|XP_003634123.1| PREDICTED: UDP-N-acetylmuramate--L-alanine ligase-like [Vitis
vinifera]
Length = 541
Score = 627 bits (1617), Expect = e-177, Method: Compositional matrix adjust.
Identities = 305/433 (70%), Positives = 357/433 (82%), Gaps = 2/433 (0%)
Query: 63 RNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGAN 122
RN + V F GWIHFVGIGGSGLSALA LALKQGFEVSGSD+VWSS+++GL E GA
Sbjct: 12 RNGKEKVGFGVFLGWIHFVGIGGSGLSALAMLALKQGFEVSGSDIVWSSFLDGLKETGAQ 71
Query: 123 LHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYN 182
LH+GHS SNIQ N+GS P+A+V SSAIPQDN+EILHAKSVG+P+YKR WL KLTE YN
Sbjct: 72 LHLGHSESNIQRNNGSSLPDAIVVSSAIPQDNLEILHAKSVGIPVYKRGNWLGKLTEHYN 131
Query: 183 LIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYD 242
LIAVSG+HGKSTTASMLAYVLK+MGDDLTA+VGA VPQF G+I G G+NFVLEADEYD
Sbjct: 132 LIAVSGTHGKSTTASMLAYVLKSMGDDLTAVVGAQVPQFGGGNIMSGSGRNFVLEADEYD 191
Query: 243 GCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLL 302
CFLGL P +AVVTN+DWEHVDIF DE+AVK+IFRRFLKQIRVGGHL++CGDS A SLL
Sbjct: 192 CCFLGLLPYIAVVTNVDWEHVDIFPDEEAVKAIFRRFLKQIRVGGHLILCGDSAGACSLL 251
Query: 303 DQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYIL 362
D ++ T +S G +S +SD G Y+I T+G S N+W+A S+ PN QGGSD++L
Sbjct: 252 DDTEESTVADHSSGKLSTLNSDKCSDG--YRITTFGISRTNEWHALSIRPNSQGGSDFVL 309
Query: 363 CERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRR 422
C RG P+A I+LQIPGVHNVLNSLAVIATV+ L+ D RQS+ESI C+K+ L+ F+GVSRR
Sbjct: 310 CHRGYPVANITLQIPGVHNVLNSLAVIATVMALVSDGRQSYESINCVKIHLNNFVGVSRR 369
Query: 423 FDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFAN 482
F+LIGT+ GC IYDD+AHHPTEVRAVLQAARQRFP KAL+ VFQPHTYSRL LK DFA
Sbjct: 370 FELIGTVCGCLIYDDYAHHPTEVRAVLQAARQRFPLKALLVVFQPHTYSRLAALKSDFAT 429
Query: 483 ALSEADQVVVSAV 495
A S+ADQV+V+ +
Sbjct: 430 AFSDADQVLVTEI 442
>gi|302767366|ref|XP_002967103.1| hypothetical protein SELMODRAFT_408505 [Selaginella moellendorffii]
gi|300165094|gb|EFJ31702.1| hypothetical protein SELMODRAFT_408505 [Selaginella moellendorffii]
Length = 521
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/424 (50%), Positives = 285/424 (67%), Gaps = 31/424 (7%)
Query: 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGND 136
W+HFVGIGG+GLS LA LALKQG++VSGSD WS+ + L EAGA +H GH ++ D
Sbjct: 35 WVHFVGIGGTGLSPLALLALKQGWKVSGSDATWSNKLRSLEEAGAIVHAGHDERWLR--D 92
Query: 137 GSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
FP+AVV SSAIP +N E++ A+ G+ + KR WL ++TE Y LIAV+G+HGKSTT
Sbjct: 93 CGIFPDAVVVSSAIPAENEEVVAARRQGLRVIKRKEWLGEITEDYELIAVAGTHGKSTTT 152
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
+ML VL++ DD+TAIVGA VPQ G++ YG G FVLEADEYDGCFLG+SPS+A+VT
Sbjct: 153 AMLTVVLQSFSDDITAIVGADVPQLAGGNMAYGKGGRFVLEADEYDGCFLGVSPSLAIVT 212
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+++WEHVD+F DE +V+ +F+ F+ +I+ G L+ICGDS RSL+ ++Q
Sbjct: 213 SVEWEHVDMFPDEASVREMFKHFISRIKPDGCLIICGDSAGTRSLITSLEQ--------- 263
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
S Q+S + +TYG NDW A + PN+ GG+DY+ R RP+A++SL++
Sbjct: 264 -YSKQAS---------RKLTYGLHEQNDWRAIMLVPNILGGTDYVAVYRNRPMARVSLKL 313
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLK----------LPLSKFMGVSRRFDLI 426
PG +NVLNSLAV+A V L + S + LK L F G+ RRF+ +
Sbjct: 314 PGTYNVLNSLAVLAAVSLLAFKGKGSCDESGQLKAMAVAAQAASSALQSFQGLRRRFEYV 373
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
GT+ C IYDD+AHHPTEVRAVLQAARQRF + + VFQPHTYSR+ L DFA A S
Sbjct: 374 GTVRRCDIYDDYAHHPTEVRAVLQAARQRFDKQPIWVVFQPHTYSRIANLLQDFAPAFSG 433
Query: 487 ADQV 490
A+++
Sbjct: 434 ANRI 437
>gi|76880190|dbj|BAE45866.1| UDP-N-acetylmuramate-alanine ligase [Physcomitrella patens]
Length = 615
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/445 (50%), Positives = 308/445 (69%), Gaps = 28/445 (6%)
Query: 64 NEECIVDFKN--RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGA 121
N E D N G +HFVGIGG+GLSAL LAL+QG++VSGSDLVWS + L EAGA
Sbjct: 103 NAEFGADASNAGSPGSVHFVGIGGAGLSALGLLALRQGWQVSGSDLVWSEEVIRLKEAGA 162
Query: 122 NLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY 181
++GHSV+ + GS+ P+AVV SSA+ N E+ A+++ VPIYKR WL K+TE Y
Sbjct: 163 RAYVGHSVAQLV-PQGSQPPDAVVVSSAVGPGNEEVEAARALNVPIYKRGDWLGKITEGY 221
Query: 182 NLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPD-GSIFYGGGKNFVLEADE 240
LIAV+G+HGK+TT +ML+ VL+ +G+D+TAIVGA VPQFPD GS G + FVLEADE
Sbjct: 222 QLIAVAGTHGKTTTTAMLSVVLRNLGEDITAIVGAQVPQFPDGGSALCGTTRKFVLEADE 281
Query: 241 YDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARS 300
YDGCFLG+SP +AV+TN++WEHVD+F DE+AVK++F++F+ QI+ GG LV CGDS A+S
Sbjct: 282 YDGCFLGVSPHLAVLTNVEWEHVDMFPDEEAVKNMFKKFVLQIKPGGCLVACGDSAGAKS 341
Query: 301 LLDQIKQDTGLKYSGGVVSNQSSDLWGQ-GHDYKIITYGFSSFNDWYAESVCPNVQGGSD 359
+L I+++ Q DL + +++T+G + +DW A + PN QGG+D
Sbjct: 342 VLGLIEEE------------QEKDLGSPFPRERRVVTFGLGA-SDWRAIMLVPNPQGGTD 388
Query: 360 YILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQS---------HESIACLK 410
Y + + RP+ ++SL++PG++NVLNSLAVI V++L+ +++S +
Sbjct: 389 YTVVYKNRPMTRVSLRLPGMYNVLNSLAVI-VVMSLLAAEKESDVGAQAKLMKRTAEAAG 447
Query: 411 LPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTY 470
L F GV RRFD +G+++GCHI DD+AHHPTEVRAVLQAARQR+ + + +FQPHT
Sbjct: 448 RALGAFSGVRRRFDFVGSVHGCHIIDDYAHHPTEVRAVLQAARQRYDQQPIWVIFQPHTV 507
Query: 471 SRLVVLKDDFANALSEADQVVVSAV 495
SRL DFA A S AD+V+V+ V
Sbjct: 508 SRLAAFLPDFAPAFSAADRVIVTQV 532
>gi|168048570|ref|XP_001776739.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671888|gb|EDQ58433.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 680
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 221/496 (44%), Positives = 304/496 (61%), Gaps = 91/496 (18%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G +HFVGIGG+GLSAL LAL+QG++VSGSDLVWS + L EAGA ++GHSV+ +
Sbjct: 117 GSVHFVGIGGAGLSALGLLALRQGWQVSGSDLVWSEEVIRLKEAGARAYVGHSVAQLV-P 175
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPI------------------------YKRD 171
GS+ P+AVV SSA+ N E+ A+++ VPI YKR
Sbjct: 176 QGSQPPDAVVVSSAVGPGNEEVEAARALNVPIILERPHANDSESGWHFPYAGRSCSYKRG 235
Query: 172 YWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDG-SIFYGG 230
WL K+TE Y LIAV+G+HGK+TT +ML+ VL+ +G+D+TAIVGA VPQFPDG S G
Sbjct: 236 DWLGKITEGYQLIAVAGTHGKTTTTAMLSVVLRNLGEDITAIVGAQVPQFPDGGSALCGT 295
Query: 231 GKNFVLE--------------ADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDE------- 269
+ FVLE ADEYDGCFLG+SP +AV+TN++WEHVD+F DE
Sbjct: 296 TRKFVLESQVRPVLWFHKFSEADEYDGCFLGVSPHLAVLTNVEWEHVDMFPDERGCLLNV 355
Query: 270 --------------------DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
+AVK++F++F+ QI+ GG LV CGDS A+S+L I+++
Sbjct: 356 TPSIDLFDQPLIVSMENILQEAVKNMFKKFVLQIKPGGCLVACGDSAGAKSVLGLIEEE- 414
Query: 310 GLKYSGGVVSNQSSDLWGQ-GHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP 368
Q DL + +++T+G + +DW A + PN QGG+DY + + RP
Sbjct: 415 -----------QEKDLGSPFPRERRVVTFGLGA-SDWRAIMLVPNPQGGTDYTVVYKNRP 462
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQS---------HESIACLKLPLSKFMGV 419
+ ++SL++PG++NVLNSLAVI V++L+ +++S + L F GV
Sbjct: 463 MTRVSLRLPGMYNVLNSLAVI-VVMSLLAAEKESDVGAQAKLMKRTAEAAGRALGAFSGV 521
Query: 420 SRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDD 479
RRFD +G+++GCHI DD+AHHPTEVRAVLQAARQR+ + + +FQPHT SRL D
Sbjct: 522 RRRFDFVGSVHGCHIIDDYAHHPTEVRAVLQAARQRYDQQPIWVIFQPHTVSRLAAFLPD 581
Query: 480 FANALSEADQVVVSAV 495
FA A S AD+V+V+ V
Sbjct: 582 FAPAFSAADRVIVTQV 597
>gi|302754970|ref|XP_002960909.1| hypothetical protein SELMODRAFT_402370 [Selaginella moellendorffii]
gi|300171848|gb|EFJ38448.1| hypothetical protein SELMODRAFT_402370 [Selaginella moellendorffii]
Length = 499
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 201/430 (46%), Positives = 265/430 (61%), Gaps = 65/430 (15%)
Query: 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGND 136
W+HFVGIGG+GLS LA LALKQG++VSGSD WS+ + L EAGA +H GH ++ D
Sbjct: 35 WVHFVGIGGTGLSPLALLALKQGWKVSGSDATWSNKLRSLEEAGAIVHAGHDERWLR--D 92
Query: 137 GSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
FP+AVV SSAIP +N E++ A+ G+ + KR WL ++TE Y LIAV+G+HGKSTT
Sbjct: 93 SGIFPDAVVVSSAIPAENEEVVAARRRGLRVIKRTEWLGEITEDYELIAVAGTHGKSTTT 152
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
+MLA VL++ DD+TAIVGA VPQ G++ YG G FVLEADEYDGCFLG+SPS+A+VT
Sbjct: 153 AMLAVVLQSFSDDITAIVGADVPQLAGGNMAYGKGGRFVLEADEYDGCFLGVSPSLAIVT 212
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+++WEHVD+F DE +V+ +F+ F+ +I+ G L+ICGD
Sbjct: 213 SVEWEHVDMFPDEASVREMFKHFISRIKPDGCLIICGDR--------------------- 251
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE------RGRPLA 370
L G H + N E C LC+ R RP+A
Sbjct: 252 --------LLGNSH--------MAFTNKMIGEQSC----------LCQTSWAVYRNRPMA 285
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLK----------LPLSKFMGVS 420
++SL++PG +NVLNSLAV+A V L + S + LK L F G+
Sbjct: 286 RVSLKLPGTYNVLNSLAVLAAVSLLAFKGKGSCDESGQLKAMAVAAQAASSALQSFQGLR 345
Query: 421 RRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
RRF+ +GT+ C IYDD+AHHPTEVRAVLQAARQRF + + VFQPHT+SR+ L DF
Sbjct: 346 RRFEYVGTVRRCDIYDDYAHHPTEVRAVLQAARQRFDKQPIWVVFQPHTHSRIAKLLQDF 405
Query: 481 ANALSEADQV 490
A A S A+++
Sbjct: 406 APAFSGANRI 415
>gi|303273394|ref|XP_003056058.1| udp-n-acetylmuramate-alanine ligase [Micromonas pusilla CCMP1545]
gi|226462142|gb|EEH59434.1| udp-n-acetylmuramate-alanine ligase [Micromonas pusilla CCMP1545]
Length = 594
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 178/488 (36%), Positives = 272/488 (55%), Gaps = 77/488 (15%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEA------------- 119
N +HF+G+GGSG+SALA +AL QG+ VSGSDL+ S+ + + EA
Sbjct: 33 NSNVALHFIGVGGSGMSALALVALSQGYLVSGSDLLRSAQLVQV-EAKVIIYVRNCVGFR 91
Query: 120 ------GANLHIGHSVSNIQGNDGSR---------------FPNAVVASSAIPQDNVEIL 158
GA GHS +N+ S P+A+VASSA+P+ N+E
Sbjct: 92 SQRNLQGAICFAGHSSTNVGSKKSSSSEPLYVPEDVHLTVSVPDAIVASSAVPRTNIEYS 151
Query: 159 HAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHV 218
A+ G+P+Y R WL + +++ N++AV+G+HGK+TTASM+A VL D+TA+VG +V
Sbjct: 152 FAREAGIPVYNRAQWLTRTSKRKNVVAVAGTHGKTTTASMVAMVLLENDLDITALVGGNV 211
Query: 219 PQFPDGSIFYGGGKN-FVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFR 277
QFP G GG N F++EADEYDG FLGLSP +AV+TN++++H D+F+ V+ F+
Sbjct: 212 RQFPGGENAIGGSGNLFLIEADEYDGAFLGLSPQIAVITNVEFDHPDLFKCLRDVRVAFK 271
Query: 278 RFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITY 337
+F ++I GG +VICGD + + + + SS L +++TY
Sbjct: 272 KFTRRIETGGSIVICGDDANSSTFMSKA---------------CSSKL-------EVVTY 309
Query: 338 GFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIG 397
GF+ N W A +V N GG+ + + +S+ +PG HNVLN+LA IAT + I
Sbjct: 310 GFARNNLWRAMNVKSNTGGGTTFTVSRADVKKQDVSISLPGRHNVLNALAAIATA-SCIR 368
Query: 398 D------------KRQSH--ESIACLK----LPLSKFMGVSRRFDLIGTIYGCHIYDDFA 439
D +R H +++ C L+ + G++RR +G C +YDD+A
Sbjct: 369 DACDASCAAPSPSQRGCHRMKNLLCFDPVMFTALNNYRGIARRMQFVGFFGSCALYDDYA 428
Query: 440 HHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAVLVFW 499
HHPT ++A + A R+++P + +F+PHT+SR V+ F ALSE D+V+V++V
Sbjct: 429 HHPTAIKAAIGAMREQYPEARVTVLFEPHTFSRTFVMLRSFVAALSEVDRVMVTSVYDAR 488
Query: 500 LIIFAVSS 507
+ A+SS
Sbjct: 489 TELSALSS 496
>gi|336178956|ref|YP_004584331.1| UDP-N-acetylmuramate--L-alanine ligase [Frankia symbiont of Datisca
glomerata]
gi|334859936|gb|AEH10410.1| UDP-N-acetylmuramate--L-alanine ligase [Frankia symbiont of Datisca
glomerata]
Length = 500
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 177/423 (41%), Positives = 249/423 (58%), Gaps = 19/423 (4%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GI GSGLSALA + L +G VSGSD + ++ L AGA + +G +V++ D
Sbjct: 9 VHFLGIAGSGLSALAHVHLARGGTVSGSDAQDAPRLDALRAAGARIRVG-AVTDPAALDA 67
Query: 138 S-RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
+ VVASSA P + E+L A+ G+P+ +R WL +LT Y+L+AV+GSHGKSTT+
Sbjct: 68 ELDGVDVVVASSAFPDGHPELLAARRRGLPVRRRSQWLPELTAGYDLVAVAGSHGKSTTS 127
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
+ML VL+A G D TA++GA V Q G+ G G+ FVLEADEY G F GL P++AV+T
Sbjct: 128 AMLTLVLRAAGVDPTAVIGAEVAQL-GGNALVGAGRVFVLEADEYGGAFAGLDPALAVIT 186
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++WEH D+F DE +V+ F F ++R GG LV+CGD R++L + + SG
Sbjct: 187 NVEWEHPDLFPDEASVRRAFTAFAARVRPGGTLVVCGDDPGVRAVLAALPASAPVSESGS 246
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
D G G ++I YG W A ++ GG + G + ++L +
Sbjct: 247 --DAGPGDTTGGGR-ARVIDYGLQPGRSWQAVNLRTTPGGGQRATVRHDGDDVGTLTLAL 303
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC---- 432
PG H V N+LAV+A T +G + S +I L+ F G RRF L+GT
Sbjct: 304 PGAHTVRNALAVLAAA-TELGVEVASALAI------LATFTGADRRFTLVGTAPATDRQG 356
Query: 433 --HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+AHHPTE+RA L AARQR + + QPHT+SRL L DDFA+A ++AD+V
Sbjct: 357 PLEVIDDYAHHPTEIRATLAAARQRAGTREVWVAVQPHTFSRLAALLDDFADAFTDADRV 416
Query: 491 VVS 493
V+
Sbjct: 417 YVT 419
>gi|358463501|ref|ZP_09173545.1| UDP-N-acetylmuramate--L-alanine ligase [Frankia sp. CN3]
gi|357070141|gb|EHI79900.1| UDP-N-acetylmuramate--L-alanine ligase [Frankia sp. CN3]
Length = 494
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 174/442 (39%), Positives = 243/442 (54%), Gaps = 52/442 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGGSGL+ LA++AL +G VSGSD S+ +E L GA + G +
Sbjct: 5 VHFLGIGGSGLAPLARIALARGHLVSGSDQEPSARVEALRALGARVRTGAAPGPAALAAE 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ VVASSA+ D+ E+ A++ GVP+ +R WL +LT Y L+AV+GSHGK+TT++
Sbjct: 65 LAGVDVVVASSALGDDHPEVAAARAAGVPVRRRSDWLPELTAGYQLVAVAGSHGKTTTSA 124
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
ML L+A G D TA++GA VPQ G G G+ FVLEADEY G F GL P++AVVTN
Sbjct: 125 MLTLALRAAGADPTAVIGAEVPQLGGGGALVGSGELFVLEADEYGGAFGGLDPALAVVTN 184
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
++WEH D+F DE AV+++F F +IR GG LV CGD ++L + + G GG
Sbjct: 185 VEWEHPDLFPDEAAVRAVFTAFAARIRPGGVLVACGDDPGVAAVLSTLAEQPG----GG- 239
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCP--NVQGGS----------------- 358
+++ YG W A V GGS
Sbjct: 240 --------------PRVVRYGLGDGLTWRAADVTTVDGTTGGSAGSQELSGIPGDAPAVV 285
Query: 359 -DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFM 417
+ G P+ + L +PG H VLN+LAV+A V + +G ++ S L+ +
Sbjct: 286 TRATVLRDGEPVGTLRLALPGRHTVLNALAVLA-VTSELGMPVEAALSA------LAGYT 338
Query: 418 GVSRRF------DLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYS 471
G +RRF DL+ + DD+AHHPTE+R L AARQ+ + + AV QPHTYS
Sbjct: 339 GAARRFQHVGSADLVSAGGSVEVIDDYAHHPTEIRVTLAAARQKAAGREVWAVIQPHTYS 398
Query: 472 RLVVLKDDFANALSEADQVVVS 493
RL L DDFA + +AD++ V+
Sbjct: 399 RLAALLDDFAVSFGDADRLYVT 420
>gi|288919056|ref|ZP_06413397.1| UDP-N-acetylmuramate/alanine ligase [Frankia sp. EUN1f]
gi|288349596|gb|EFC83832.1| UDP-N-acetylmuramate/alanine ligase [Frankia sp. EUN1f]
Length = 573
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 173/449 (38%), Positives = 243/449 (54%), Gaps = 35/449 (7%)
Query: 72 KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSN 131
+R +HF+GIGGSGLS LA++ L G EVSGSD S+ + L G + +G
Sbjct: 28 PDRAKRVHFLGIGGSGLSPLAQIHLAGGGEVSGSDQEDSARVAMLRALGIAVRVGPPADP 87
Query: 132 IQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHG 191
R + +VASSA+ D+ EI+ A+++G+P+ +R WL +LT Y L+AV+GSHG
Sbjct: 88 AALATELRGADVIVASSALRDDHPEIVAARALGIPVMRRSDWLPELTAAYRLVAVAGSHG 147
Query: 192 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPS 251
K+TTA+ML VL+A G D TA++GA V Q GS G FVLEADEY G F GL P
Sbjct: 148 KTTTAAMLTLVLRAAGVDPTAVIGAEVAQL-GGSAVAGTSDVFVLEADEYGGAFAGLDPE 206
Query: 252 VAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
+AV+TN++WEH D+F DE AV ++F F ++R GG LV+CGD ++L ++ Q
Sbjct: 207 LAVITNVEWEHPDLFPDEAAVHAVFTDFAARVRPGGRLVVCGDHPGVAAVLARLDQRAAA 266
Query: 312 KYSGGVVSNQSSDLWGQ----------------------GHDYKIITYGFSSFNDWYAES 349
+Q GQ +++ YGF++ W A
Sbjct: 267 PDQPRTARDQPRSTPGQPAPEQPRTAPDQPGPAPEQPGSAARARVVDYGFAAGRSWQAVG 326
Query: 350 VCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACL 409
P GGS + G + +++L +PG H V + +G ++ L
Sbjct: 327 YAPRPGGGSVSTVWHDGVEVGELALALPGPH-VALNALAALATSAELGVAPET-----AL 380
Query: 410 KLPLSKFMGVSRRFDLIG---TIYGC--HIYDDFAHHPTEVRAVLQAARQRFPNKALIAV 464
+ L F G +RRFD +G T G I DD+AHHPTE+RA L+AAR R + + AV
Sbjct: 381 RA-LGTFSGAARRFDTVGQASTAGGTAVEIVDDYAHHPTEIRATLRAARDRAAGRQVWAV 439
Query: 465 FQPHTYSRLVVLKDDFANALSEADQVVVS 493
QPHT+SRL L DDFA A +AD+V V+
Sbjct: 440 TQPHTFSRLAALLDDFATAFEDADRVYVT 468
>gi|158316852|ref|YP_001509360.1| UDP-N-acetylmuramate--L-alanine ligase [Frankia sp. EAN1pec]
gi|158112257|gb|ABW14454.1| UDP-N-acetylmuramate--alanine ligase [Frankia sp. EAN1pec]
Length = 549
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 167/428 (39%), Positives = 236/428 (55%), Gaps = 25/428 (5%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
R +HF+GIGG+GLS LA++ L G +VSGSD +S + L E G + +G +
Sbjct: 32 ERARRVHFLGIGGAGLSPLAQIHLAAGGQVSGSDQEYSPRVAMLRELGVPVRVGPAADAA 91
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
+ VVASSA+ D+ EI+ A+ +GVP+ +R WL +LT Y L+AV+GSHGK
Sbjct: 92 ALAAELSAADVVVASSALRDDHPEIIAARELGVPVRRRSDWLPELTAPYRLVAVAGSHGK 151
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+TTA+ML VL A G D TA++GA V Q GS G G FVLEADEY G F GL P +
Sbjct: 152 TTTAAMLTLVLAAGGADPTAVIGADVAQL-GGSAVTGRGDVFVLEADEYGGAFAGLDPEL 210
Query: 253 AVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
AV+TN++WEH D+F DE +V+++F F ++R GG LV+CGD ++L ++ +
Sbjct: 211 AVITNVEWEHPDLFPDEASVRAVFADFAARVRPGGRLVVCGDHPGVAAVLAELDR----- 265
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQI 372
D +++ YGF+ W A P GGS + G + ++
Sbjct: 266 -------RAEPDRRADAPRARVVDYGFAPGRTWRAVDYVPLPGGGSTSTVLHDGNRVGEL 318
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG- 431
+L +PG H + +G L+ L + G +RRFD++G
Sbjct: 319 TLALPGPH-IALDALAALATAAELGVPPTD-----ALRT-LGTYAGAARRFDVVGRASAP 371
Query: 432 ----CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
I DD+AHHPTE+RA L+AAR R + + AV QPHT+SRL L DDFA A +A
Sbjct: 372 GGTRVEIVDDYAHHPTEIRATLRAARDRAAGRQVWAVAQPHTFSRLAALLDDFATAFGDA 431
Query: 488 DQVVVSAV 495
D+V V+ V
Sbjct: 432 DRVYVTDV 439
>gi|86740123|ref|YP_480523.1| UDP-N-acetylmuramate--L-alanine ligase [Frankia sp. CcI3]
gi|109892704|sp|Q2JD48.1|MURC_FRASC RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|86566985|gb|ABD10794.1| UDP-N-acetylmuramate--L-alanine ligase [Frankia sp. CcI3]
Length = 502
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 176/439 (40%), Positives = 246/439 (56%), Gaps = 41/439 (9%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
R +HF+GIGGSGLS LA++ L G VSGSD S + L G + IG +
Sbjct: 4 QRTQHVHFLGIGGSGLSPLAQIHLAGGGTVSGSDSEDSPRVATLRARGVPIRIGATPGPA 63
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
+ VVASSA+P D+ EI+ A+++G+P+ +R WL +LT Y L+AV+GSHGK
Sbjct: 64 AFAAELAGADVVVASSALPDDHPEIVAARALGLPVRRRSEWLPELTAGYRLVAVAGSHGK 123
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
STT++ML VL+A G D TA++GA V Q G+ G G FVLE+DEY G F GL PS+
Sbjct: 124 STTSAMLTLVLRAAGLDPTAVIGAEVSQL-GGNALAGSGDVFVLESDEYGGAFAGLDPSI 182
Query: 253 AVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
AV+TN++WEH D+F DE +V++ F F +++R GG LV+CGD ++L ++ G +
Sbjct: 183 AVITNVEWEHPDVFPDEASVRTAFAAFARRVRPGGRLVVCGDHPGVVAVLTEL----GRQ 238
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDY---ILCERGRPL 369
G V+ +D +I YGF + W A V G D + G+ +
Sbjct: 239 RPGNDVAV---------NDVAVIDYGFGAERHWRAVDVV--TTAGDDMTRATVLRAGQEI 287
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
++L +PG H+VLN+LAV+AT L + A L+ F G +RRF+ +G
Sbjct: 288 GALTLTVPGRHSVLNALAVLATATEL-------GVAPAQTLTTLTTFTGAARRFEFVGFW 340
Query: 430 YG---------------CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
G + DD+AHHPTEVR L AAR R + + V QPHT+SR
Sbjct: 341 NGPADSTGVGPAGGPGSLEVIDDYAHHPTEVRLTLAAARSRARGRQIWTVLQPHTFSRFA 400
Query: 475 VLKDDFANALSEADQVVVS 493
L DDFA A S+AD+V V+
Sbjct: 401 ALLDDFAAAFSDADRVYVT 419
>gi|312196223|ref|YP_004016284.1| UDP-N-acetylmuramate--L-alanine ligase [Frankia sp. EuI1c]
gi|311227559|gb|ADP80414.1| UDP-N-acetylmuramate/alanine ligase [Frankia sp. EuI1c]
Length = 498
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 174/458 (37%), Positives = 244/458 (53%), Gaps = 75/458 (16%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS------VSN 131
+HF+GIGGSGL+ LA++AL +G VSGSD S ++ L GA + G +
Sbjct: 1 MHFLGIGGSGLAPLARIALARGASVSGSDQEPSDRVQALRALGARVRTGAPPDPGALAAE 60
Query: 132 IQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHG 191
+ G D VVASSA+P D+ EI+ A++ G+P+ +R WL +LT Y L+AV+GSHG
Sbjct: 61 LAGVD------VVVASSALPDDHPEIVAARAAGLPVRRRSDWLPELTAGYRLVAVAGSHG 114
Query: 192 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPS 251
K+TT++ML L+A G D TA++G VPQ G++ G G+ FVLEADEY G F GL P+
Sbjct: 115 KTTTSAMLTVALRAAGADPTAVIGGEVPQLGGGAVV-GRGEIFVLEADEYGGAFRGLDPA 173
Query: 252 VAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
V ++TN++WEH D+F DE AV+++F F ++R GG LV CGD ++L + +
Sbjct: 174 VTILTNVEWEHPDLFPDEAAVRAVFAAFAARVRPGGTLVACGDDPGVAAVLGTLAE---- 229
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQ---------------- 355
G G +++ YGF W A V Q
Sbjct: 230 ---------------GSGGGPRVVRYGFGDGLGWRAVDVVTTGQPDGARPASGSATSADA 274
Query: 356 -GGSDYI--------------LCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKR 400
GG+D + + G P+ + L +PG H VLN+LAV+AT L
Sbjct: 275 DGGADGLDRTAAGPPVVTEATVLRDGEPVGTLRLALPGRHTVLNALAVLATASEL----- 329
Query: 401 QSHESIACLKLPLSKFMGVSRRFDLIGT-----IYGCHIYDDFAHHPTEVRAVLQAARQR 455
+ L+ + G +RRF IG I DD+AHHPTE+RA L AARQ+
Sbjct: 330 --GVPVETTLTALAGYTGAARRFQRIGARALPGTGAVEIVDDYAHHPTEIRATLAAARQQ 387
Query: 456 FPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVS 493
+ + AV QPHTYSRL L DFA A +AD++ V+
Sbjct: 388 AAGRQVWAVLQPHTYSRLAALLADFAVAFGDADRLYVT 425
>gi|220931753|ref|YP_002508661.1| UDP-N-acetylmuramate--L-alanine ligase [Halothermothrix orenii H
168]
gi|219993063|gb|ACL69666.1| UDP-N-acetylmuramate--alanine ligase [Halothermothrix orenii H 168]
Length = 459
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 159/422 (37%), Positives = 238/422 (56%), Gaps = 44/422 (10%)
Query: 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQG 134
K +H +GIGG +S +A++ LK+G++VSGSDL S ++ L +GAN++IGHS NI+G
Sbjct: 4 KKHVHLIGIGGISMSGIAQMLLKRGYKVSGSDLKDSPLLDRLRRSGANVYIGHSPENIKG 63
Query: 135 NDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKST 194
D +V S+AIP+DN E+ A+ G+P+Y R +AKL E IA+SG+HGK+T
Sbjct: 64 AD------MIVISTAIPEDNSELQAARKAGLPVYGRAQMIAKLMEDKKTIAISGTHGKTT 117
Query: 195 TASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAV 254
T SM+A +LK D T +VG + G+++ G G+ FV EADE DG L PS V
Sbjct: 118 TTSMVATILKENKMDPTVMVGGVLNNI-GGNVYLGKGEYFVTEADESDGSLLYFDPSGVV 176
Query: 255 VTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYS 314
VTN++++H D ++ ++ + + F+ F+ +I G ++ + R +LD
Sbjct: 177 VTNIEFDHHDYYDSKEKLLNTFKEFVNKIPKDGKAIVYAEDDNIRKILDN---------- 226
Query: 315 GGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPN-VQGGSDYILCERGRPLAQIS 373
D +++TYG N +++ N + GS Y L R L +I
Sbjct: 227 ---------------EDRRVLTYG---INAGKLKAININTLPFGSYYNLVYGERVLGEIR 268
Query: 374 LQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH 433
LQ+PGVHNVLNSLA +A V +G S ++ L KF GV RRF+ G I
Sbjct: 269 LQVPGVHNVLNSLAAVA-VGMYVG------LSFTDIQESLGKFYGVHRRFEKKGLIDSIL 321
Query: 434 IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVS 493
I DD+AHHPTE++A L+AAR + +IA+FQPH YSR ++FA + D ++V+
Sbjct: 322 IIDDYAHHPTEIKATLKAARNTGYER-IIAIFQPHRYSRTRHFMEEFAKCFDDVDHLIVT 380
Query: 494 AV 495
+
Sbjct: 381 DI 382
>gi|345304536|ref|YP_004826438.1| UDP-N-acetylmuramate--L-alanine ligase [Rhodothermus marinus
SG0.5JP17-172]
gi|345113769|gb|AEN74601.1| UDP-N-acetylmuramate--L-alanine ligase [Rhodothermus marinus
SG0.5JP17-172]
Length = 479
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 159/420 (37%), Positives = 236/420 (56%), Gaps = 43/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H VGIGG G+S++A++ L +GF V+GSDL S E L GA ++ GH ++ D
Sbjct: 19 VHMVGIGGIGMSSIAEVLLLRGFRVTGSDLKRSEITERLERLGAVVYEGHRPEHVGDAD- 77
Query: 138 SRFPNAVVASSAI-PQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
VV SSA+ PQ+N E L A +P+ R L +L I V+G+HGK+TT
Sbjct: 78 -----VVVYSSAVRPQENPETLEALRRRIPLIPRAEMLGELMRMKFGIGVAGTHGKTTTT 132
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM+ V+ G D T IVG V F ++ G G V+EADEYD FL L+P++AVVT
Sbjct: 133 SMVGLVVSEGGFDPTIIVGGKVAAFESNAV-AGEGDIIVIEADEYDRTFLRLTPTLAVVT 191
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+++ EH+DI+ D D + + FR+F + G ++C D ++L+ Q+
Sbjct: 192 SIEPEHLDIYRDLDDLMAAFRQFAGSVPFFGAAILCLDDPNVQALVGQL----------- 240
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPLAQISLQ 375
D ++ TYG + + AE+V +G GS + + +G PL I LQ
Sbjct: 241 --------------DRRVRTYGLARQAEIRAENV--RFEGFGSRFDVLLQGEPLGTIQLQ 284
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
+PG+HNV N+LA +A L L C++ L++F GV RRF+ +G ++G +
Sbjct: 285 VPGLHNVRNALAAVAVGLEL-------DIPFECIQAGLARFTGVRRRFERLGEVHGVLVI 337
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHPTE+RA L+AA P++ L+AVFQPH YSR ++DFA + +AD +VV+ V
Sbjct: 338 DDYAHHPTEIRATLEAATTAMPDRRLVAVFQPHLYSRTRDFQEDFARSFVDADVLVVTDV 397
>gi|302389517|ref|YP_003825338.1| UDP-N-acetylmuramate--L-alanine ligase [Thermosediminibacter oceani
DSM 16646]
gi|302200145|gb|ADL07715.1| UDP-N-acetylmuramate--L-alanine ligase [Thermosediminibacter oceani
DSM 16646]
Length = 461
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 160/439 (36%), Positives = 249/439 (56%), Gaps = 44/439 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG+G+S +AK+ ++ G+EVSGSDL +S + L E GA + IGH +NI+G D
Sbjct: 8 IHFIGIGGTGMSGIAKIVMELGYEVSGSDLKFSEALNRLKEEGARVFIGHDAANIRGAD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSAIP N E + A +P+ R L+ L IAVSG+HGK+TT S
Sbjct: 67 -----LVVVSSAIPPTNPEYVEAIKNDIPVIHRADMLSTLMATRKGIAVSGAHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M++ VL+ G T ++G + G+ G G+ V EADE DG FL L+P +AVVTN
Sbjct: 122 MISLVLEKGGMSPTVVIGGELNDI-GGNATLGKGEYMVAEADESDGSFLKLTPYIAVVTN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
++ +H+D ++D +++K +R+F+ ++ G ++ D++ R ++ ++
Sbjct: 181 IENDHMDHYKDMESMKEAYRKFIMNLKKDGFALLGTDNEHVRDVMKRV------------ 228
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPLAQISLQI 376
D TYG + D+ +++ +++G S + + R L ++ L +
Sbjct: 229 -------------DVPYFTYGINYPADYMPKNI--HIEGVDSRFEVYYRNERLGELELHV 273
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG+HN+ N+ A +A V +G K E IA L F GV RRF LIG + G + D
Sbjct: 274 PGMHNIYNATAAVA-VGHRLGLKM---EDIAG---ALQAFRGVQRRFQLIGEVGGVRVVD 326
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAVL 496
D+AHHPTE++A L+AA+ PNK L AVFQPH Y+R +L ++F NA +AD+V+++ +
Sbjct: 327 DYAHHPTEIKATLKAAKLLNPNK-LYAVFQPHRYTRTKMLAEEFGNAFEDADEVIITRLY 385
Query: 497 -VFWLIIFAVSSFWLIMAI 514
I VSS ++ A+
Sbjct: 386 SAGEAPIPGVSSMLIVEAL 404
>gi|373458542|ref|ZP_09550309.1| UDP-N-acetylmuramate--L-alanine ligase [Caldithrix abyssi DSM
13497]
gi|371720206|gb|EHO41977.1| UDP-N-acetylmuramate--L-alanine ligase [Caldithrix abyssi DSM
13497]
Length = 457
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 156/423 (36%), Positives = 233/423 (55%), Gaps = 40/423 (9%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
RK HFVGIGG G+S LA++ L G VSGSD W+ E L + GA + GH +N+
Sbjct: 5 KRKKRFHFVGIGGIGMSGLAEILLDMGHAVSGSDREWTEITEYLEQRGARVFRGHHYANV 64
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
+ + ++ SSA+PQDN E+ A+ G+P KR L +L ++ +AV+G+HGK
Sbjct: 65 ADD-----VDFLIYSSAVPQDNPELRAAREKGIPQLKRAQLLGQLFNRHFGLAVAGTHGK 119
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+TT SM+ ++ G D T +VG + + G V EADEYD FL L P +
Sbjct: 120 TTTTSMIGQIMITGGLDPTIVVGGRLHNLMTNARL-GKSHFMVTEADEYDRSFLTLFPRM 178
Query: 253 AVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
A++T+L+ +H+DI+ED D ++ F +F Q+ G +++C + + + L+ QI+ +
Sbjct: 179 ALLTSLEADHLDIYEDLDDLRRTFVKFANQVSFDGLVIVCAEDENLKELIPQIQPE---- 234
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQI 372
++TYGF + D+ A V G + + + RG LA++
Sbjct: 235 ---------------------VLTYGFGAEADFRA-CVLEERAGQTRFEVYHRGERLAEL 272
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC 432
+L +PG HNVLN+LA + L L I+ + L++F GV RRFD++ G
Sbjct: 273 TLNVPGKHNVLNALAALVAGLEL-------EIEISVMVKALAEFKGVERRFDVLAEKDGI 325
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+ DD+AHHPTEV LQAAR + NK LIAVFQPH +SR +FA AL+ AD V+V
Sbjct: 326 LVVDDYAHHPTEVAVTLQAARDGW-NKRLIAVFQPHLFSRTRDFYREFAQALNAADVVIV 384
Query: 493 SAV 495
S +
Sbjct: 385 SKI 387
>gi|268318240|ref|YP_003291959.1| UDP-N-acetylmuramate--L-alanine ligase [Rhodothermus marinus DSM
4252]
gi|262335774|gb|ACY49571.1| UDP-N-acetylmuramate/alanine ligase [Rhodothermus marinus DSM 4252]
Length = 479
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 158/420 (37%), Positives = 235/420 (55%), Gaps = 43/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H VGIGG G+S++A++ L +GF V+GSDL S E L GA ++ GH ++ D
Sbjct: 19 VHMVGIGGIGMSSIAEVLLLRGFRVTGSDLKRSEITERLERLGAVVYEGHRPEHVGDAD- 77
Query: 138 SRFPNAVVASSAI-PQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
VV SSA+ PQ+N E L A +P+ R L +L I V+G+HGK+TT
Sbjct: 78 -----VVVYSSAVRPQENPETLEALRRRIPLIPRAEMLGELMRMKFGIGVAGTHGKTTTT 132
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM+ V+ G D T IVG V F ++ G G V+EADEYD FL L+P++AVVT
Sbjct: 133 SMVGLVVSEGGFDPTIIVGGKVAAFESNAV-AGEGDIIVIEADEYDRTFLRLTPTLAVVT 191
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+++ EH+DI+ D D + + FR+F + G ++C D ++L+ Q+
Sbjct: 192 SIEPEHLDIYRDLDDLMAAFRQFASSVPFFGAAILCLDDPNVQALVGQL----------- 240
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPLAQISLQ 375
D ++ TYG + + AE+V +G GS + + +G PL I LQ
Sbjct: 241 --------------DRRVRTYGLARQAEIRAENV--QFEGFGSRFDVLLQGEPLGTIQLQ 284
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
+PG+HNV N+LA +A L L ++ L++F GV RRF+ +G ++G +
Sbjct: 285 VPGLHNVRNALAAVAVGLEL-------DIPFEAIQAGLARFTGVRRRFERLGEVHGVLVI 337
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHPTE+RA L+AA P++ L+AVFQPH YSR ++DFA + +AD +VV+ V
Sbjct: 338 DDYAHHPTEIRATLEAAATAMPDRRLVAVFQPHLYSRTRDFQEDFARSFVDADVLVVTDV 397
>gi|429759636|ref|ZP_19292134.1| UDP-N-acetylmuramate--L-alanine ligase [Veillonella atypica KON]
gi|429179597|gb|EKY20844.1| UDP-N-acetylmuramate--L-alanine ligase [Veillonella atypica KON]
Length = 460
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 151/419 (36%), Positives = 241/419 (57%), Gaps = 42/419 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH +GIGGSG+ A+A + +++G+EVSGSD+ S +E + GA +HIGH+ +QG D
Sbjct: 8 IHLIGIGGSGMRAIANILIQKGYEVSGSDVKESDVIERFRQMGATVHIGHNADYVQGVD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
AVV S+AI +DN EI+ AK G+ I R + + + N IAV+G+HGK++T S
Sbjct: 67 -----AVVRSTAIREDNPEIVAAKEQGITILHRSDIVKAVLDVTNGIAVAGAHGKTSTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+ +L + T I+G V + GS G G+ V+EADE DG FL L P V+TN
Sbjct: 122 MIGQILVEGQMEPTVIIGGEV-DYLKGSSCLGKGEYSVVEADESDGSFLKLRPKTIVITN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
++ +H+D ++ + + + F +F++ + V G V+CGD+ R ++ ++++
Sbjct: 181 IEDDHMDHYKTMENLLNAFCQFVETLPVDGKAVVCGDNDNIRYVMSKVER---------- 230
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS-DYILCERGRPLAQISLQI 376
+ ITYG ND+ A+++ + + S Y + +G L+++SL++
Sbjct: 231 ---------------QFITYGLEESNDYVAKNI--HYEDSSLVYDVVRKGETLSRVSLRV 273
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG HNVLNSLA + I H + + L KF+G RRF+ G + G + D
Sbjct: 274 PGNHNVLNSLA------SFIVAHECCHVPVPSIVKALGKFIGAKRRFETKGHVAGVWVVD 327
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHPTE++A L+AA++ +I VFQPH YSR +LKD+FA A + AD++ ++ +
Sbjct: 328 DYAHHPTEIKATLKAAKE-LEKHRVICVFQPHRYSRTSLLKDEFATAFTSADEIYMTDI 385
>gi|401679805|ref|ZP_10811729.1| UDP-N-acetylmuramate--L-alanine ligase [Veillonella sp. ACP1]
gi|400218932|gb|EJO49803.1| UDP-N-acetylmuramate--L-alanine ligase [Veillonella sp. ACP1]
Length = 460
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 151/419 (36%), Positives = 241/419 (57%), Gaps = 42/419 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH +GIGGSG+ A+A + +++G+EVSGSD+ S +E + GA +HIGH+ +QG D
Sbjct: 8 IHLIGIGGSGMRAIANILIQKGYEVSGSDVKESDVIERFRKMGATVHIGHNADYVQGVD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
AVV S+AI +DN EI+ AK G+ I R + + + N IAV+G+HGK++T S
Sbjct: 67 -----AVVRSTAIREDNPEIVAAKEQGITILHRSDIVKAVLDVTNGIAVAGAHGKTSTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+ +L + T I+G V + GS G G+ V+EADE DG FL L P V+TN
Sbjct: 122 MIGQILVEGQMEPTVIIGGEV-DYLKGSSCLGKGEYSVVEADESDGSFLKLRPKTIVITN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
++ +H+D ++ + + + F +F++ + V G V+CGD+ R ++ ++++
Sbjct: 181 IEDDHMDHYKTMENLLNAFCQFVETLPVDGKAVVCGDNDNIRYVMSKVER---------- 230
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS-DYILCERGRPLAQISLQI 376
+ ITYG ND+ A+++ + + S Y + +G L+++SL++
Sbjct: 231 ---------------QFITYGLEESNDYVAKNI--HYEDSSLVYDVVRKGETLSRVSLRV 273
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG HNVLNSLA + I H + + L KF+G RRF+ G + G + D
Sbjct: 274 PGNHNVLNSLA------SFIVAHECCHVPVPSIVKALGKFIGAKRRFETKGHVAGVWVVD 327
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHPTE++A L+AA++ +I VFQPH YSR +LKD+FA A + AD++ ++ +
Sbjct: 328 DYAHHPTEIKATLKAAKE-LEKHRVICVFQPHRYSRTSLLKDEFATAFTSADEIYMTDI 385
>gi|303230738|ref|ZP_07317485.1| UDP-N-acetylmuramate--L-alanine ligase [Veillonella atypica
ACS-049-V-Sch6]
gi|302514498|gb|EFL56493.1| UDP-N-acetylmuramate--L-alanine ligase [Veillonella atypica
ACS-049-V-Sch6]
Length = 460
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 151/419 (36%), Positives = 242/419 (57%), Gaps = 42/419 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH +GIGGSG+ A+A + +++G+EVSGSD+ S +E + GA +HIGH+ +QG D
Sbjct: 8 IHLIGIGGSGMRAIANILIQKGYEVSGSDVKESDVIERFRKMGATVHIGHNADYVQGVD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
AVV S+AI +DN EI+ AK G+ I R + + + N IAV+G+HGK++T S
Sbjct: 67 -----AVVRSTAIREDNPEIVAAKEQGITILHRSDIVKAVLDVTNGIAVAGAHGKTSTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+ +L + T I+G V + GS G G+ V+EADE DG FL L P + V+TN
Sbjct: 122 MIGQILVEGQMEPTVIIGGEV-DYLKGSSCLGKGEYSVVEADESDGSFLKLRPKMIVITN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
++ +H+D ++ + + + F +F++ + V G V+CGD+ R ++ ++++
Sbjct: 181 IEDDHMDHYKTMENLLNAFCQFVETLPVDGKAVVCGDNDNIRYVMSKVER---------- 230
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS-DYILCERGRPLAQISLQI 376
+ ITYG ND+ A+++ + + S Y + +G L+++SL++
Sbjct: 231 ---------------QFITYGLEDSNDYVAKNI--HYEDSSLVYDVVHKGETLSRVSLRV 273
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG HNVLNSLA + I H + + L KF+G RRF+ G + G + D
Sbjct: 274 PGNHNVLNSLA------SFIVAHECCHVPVPSIVKALGKFIGAKRRFETKGHVAGVWVVD 327
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHPTE++A L+AA++ +I VFQPH YSR +LKD+FA A + AD++ ++ +
Sbjct: 328 DYAHHPTEIKATLKAAKE-LEKHRVICVFQPHRYSRTSLLKDEFATAFTSADEIYMTDI 385
>gi|303228388|ref|ZP_07315221.1| UDP-N-acetylmuramate--L-alanine ligase [Veillonella atypica
ACS-134-V-Col7a]
gi|302516890|gb|EFL58799.1| UDP-N-acetylmuramate--L-alanine ligase [Veillonella atypica
ACS-134-V-Col7a]
Length = 460
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 151/419 (36%), Positives = 241/419 (57%), Gaps = 42/419 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH +GIGGSG+ A+A + +++G+EVSGSD+ S +E + GA +HIGH+ +QG D
Sbjct: 8 IHLIGIGGSGMRAIANILIQKGYEVSGSDVKESDVIERFRKMGATVHIGHNADYVQGVD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
AVV S+AI +DN EI+ AK G+ I R + + + N IAV+G+HGK++T S
Sbjct: 67 -----AVVRSTAIREDNPEIVAAKEQGITILHRSDIVKAVLDVTNGIAVAGAHGKTSTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+ +L + T I+G V + GS G G+ V+EADE DG FL L P V+TN
Sbjct: 122 MIGQILVEGQMEPTVIIGGEV-DYLKGSSCLGKGEYSVVEADESDGSFLKLRPKTIVITN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
++ +H+D ++ + + + F +F++ + V G V+CGD+ R ++ ++++
Sbjct: 181 IEDDHMDHYKTMENLLNAFCQFVETLPVDGKAVVCGDNDNIRYVMSKVER---------- 230
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS-DYILCERGRPLAQISLQI 376
+ ITYG ND+ A+++ + + S Y + +G L+++SL++
Sbjct: 231 ---------------QFITYGLEDSNDYVAKNI--HYEDSSLVYDVVHKGETLSRVSLRV 273
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG HNVLNSLA + I H + + L KF+G RRF+ G + G + D
Sbjct: 274 PGNHNVLNSLA------SFIVAHECCHVPVPSIVKALGKFIGAKRRFETKGHVAGVWVVD 327
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHPTE++A L+AA++ +I VFQPH YSR +LKD+FA A + AD++ ++ +
Sbjct: 328 DYAHHPTEIKATLKAAKE-LEKHRVICVFQPHRYSRTSLLKDEFATAFTSADEIYMTDI 385
>gi|150388000|ref|YP_001318049.1| UDP-N-acetylmuramate--L-alanine ligase [Alkaliphilus
metalliredigens QYMF]
gi|189028968|sp|A6TJM2.1|MURC_ALKMQ RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|149947862|gb|ABR46390.1| UDP-N-acetylmuramate--alanine ligase [Alkaliphilus metalliredigens
QYMF]
Length = 460
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 147/419 (35%), Positives = 236/419 (56%), Gaps = 41/419 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH +GIGG +SA+A++ L+ G+ +SGSD+ S+ L + GA + IGH+ NIQ
Sbjct: 14 IHLIGIGGISMSAIAEILLENGYHISGSDMKESNLTHKLRDHGAEIFIGHASENIQN--- 70
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYN-LIAVSGSHGKSTTA 196
P+ VV ++A+ DN E + A+ +G+P+ R L ++ +KY IAV+GSHGK+TT
Sbjct: 71 ---PDLVVYTAAVKADNPERIRAEELGIPLADRAEMLGQIMKKYEKAIAVAGSHGKTTTT 127
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
S+++ +++ D T +VG + + G+I G ++F+ EA EY FL P + ++
Sbjct: 128 SLISLLMEYSNLDPTILVGGELDEI-GGNIKIGQSQHFITEACEYVESFLKFYPFIGIIL 186
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N+D +H+D F+D + +KS F++F ++I G L+ D R +
Sbjct: 187 NIDEDHLDYFKDIEHIKSAFKKFAQRIPKEGFLIASYDDAHVREI--------------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
S DL D +ITYG + + + A ++ + +G + + G+ + SL I
Sbjct: 232 -----SRDL-----DCHVITYGIKTKSQFMAHNIEFSFEGLPSFDVSFEGKTIGSFSLNI 281
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG+HNV NSLA IAT L D + +++F G+ RRFDL+G + G + D
Sbjct: 282 PGLHNVYNSLAAIATTYVLGVDP-------VAISKHITRFKGIHRRFDLLGEVKGAKVID 334
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHP E+RA L+AA+ ++P+K + VFQPHTYSR L DFA + AD V+++ +
Sbjct: 335 DYAHHPVEIRATLEAAK-KYPHKKIWCVFQPHTYSRTQALLKDFAKSFYLADHVIITDI 392
>gi|288574852|ref|ZP_06393209.1| UDP-N-acetylmuramate/alanine ligase [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288570593|gb|EFC92150.1| UDP-N-acetylmuramate/alanine ligase [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 482
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 150/418 (35%), Positives = 233/418 (55%), Gaps = 39/418 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH +GIGG+G+S LA L + GF+VSG D+ + Y+E + +A + +IGHS ++
Sbjct: 14 IHLMGIGGAGMSGLALLLKELGFDVSGCDMSYGFYVEKVAQADIDFNIGHSSDHL----- 68
Query: 138 SRF-PNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
SRF P+ +V SSAIP+DN E++ A+ G+ + +R L+ + + I V+G+HGK+TT+
Sbjct: 69 SRFSPDLLVYSSAIPEDNEELVVARESGIAVAQRAQVLSAIFDVRYGIGVAGTHGKTTTS 128
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM+ +L G + T +G + + G G + V E DE DG FL P+++V+T
Sbjct: 129 SMIGLILSGAGLEPTVAIGGELCDIGCNARL-GSGPHMVAELDESDGSFLCFHPTISVIT 187
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N+DW+HV+ + D D+V + F F K +R GG V+CG+ +SLL +++D G K
Sbjct: 188 NVDWDHVNHYPDFDSVLNTFESFSKNLRKGGLSVLCGEDGGVQSLLKMMEKD-GPKAK-- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+TYG+ DW A + N GG + + + GR + +I L +
Sbjct: 245 ------------------VTYGWGDRWDWGATDIEYNHGGGVSFSVRKHGRSIGRIELSV 286
Query: 377 PGVHNVLNSLA--VIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHI 434
G HNVLN+LA ++A L++ D +K L +F G RR G + +
Sbjct: 287 SGDHNVLNALASCIVADTLSVPFD---------VIKRTLRQFKGAKRRLQFKGGVEHIDV 337
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
YDD+ HHP EV A L+A Q FP + ++ FQPH ++R + +DFA L+ AD+VVV
Sbjct: 338 YDDYGHHPKEVEATLKAISQIFPERKILVAFQPHRFTRTAAMAEDFAEVLTYADKVVV 395
>gi|206602131|gb|EDZ38613.1| UDP-N-acetylmuramate--L-alanine ligase [Leptospirillum sp. Group II
'5-way CG']
Length = 464
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 158/421 (37%), Positives = 224/421 (53%), Gaps = 48/421 (11%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
HFVGIGG+G++ +A++ L +G VSGSD + L E GA + +GH + D
Sbjct: 10 HFVGIGGNGMAPVAEILLSRGALVSGSDKTQTDLTRRLSELGARVFVGHRAEQVGSVD-- 67
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
AVV S+AI +N E+L A+ +G+P+ R L+ + + +AV+GSHGK+TT SM
Sbjct: 68 ----AVVISTAISPENPELLEARRLGIPVVHRGEALSGIMRGFRGVAVAGSHGKTTTTSM 123
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
+A+VL G D T +VG VP F G+ G FV EADE DG FL +SP VAVVTN+
Sbjct: 124 IAHVLAHGGLDPTCVVGGRVPGF-GGNARVGKKNIFVAEADESDGSFLKISPHVAVVTNI 182
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVV 318
D EH+D ++ D +K+ F RFL + G V+C D ++L +
Sbjct: 183 DQEHLDYYQSFDQLKAAFERFLASVPPEGLAVVCLDDPELSNILPSL------------- 229
Query: 319 SNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPLAQISLQIP 377
++ W TYGF+ D V + +G + + + RG+ + SL IP
Sbjct: 230 ---NAPHW---------TYGFNPSADVVGSDV--SAEGLSTSFSVRLRGKDIGSFSLNIP 275
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHE---SIACLKLPLSKFMGVSRRFDLIGTIYGCHI 434
GVHNVLN+LA IA H C++ L +F GV RRF +G G I
Sbjct: 276 GVHNVLNALATIAV----------GHHFGLEAECVREALERFRGVGRRFTQVGEEGGIRI 325
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSA 494
DD+ HHPTE+ L AARQ +P++ L+ FQPH +SR L FA+A AD +V+
Sbjct: 326 VDDYGHHPTEIGVTLAAARQAYPDRRLVVAFQPHRFSRTRDLLSRFASAFQLADVLVLGE 385
Query: 495 V 495
+
Sbjct: 386 I 386
>gi|20808924|ref|NP_624095.1| UDP-N-acetylmuramate--L-alanine ligase [Thermoanaerobacter
tengcongensis MB4]
gi|23821878|sp|Q8R749.1|MURC_THETN RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|20517585|gb|AAM25699.1| UDP-N-acetylmuramate-alanine ligase [Thermoanaerobacter
tengcongensis MB4]
Length = 460
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 145/419 (34%), Positives = 229/419 (54%), Gaps = 41/419 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG +S LA + L++G ++GSD+ S +E L + GA ++I H ++ G D
Sbjct: 11 IHFIGIGGISMSGLAHILLEEGHTITGSDIKNSHLIERLEKEGAKINIPHMAESVIGAD- 69
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTTA 196
VV ++AI DNVE AK +G+PI R L + +KY +AV+GSHGK+TT
Sbjct: 70 -----LVVYTAAIHDDNVEYQKAKELGIPIIDRATLLGLIMKKYKFGVAVAGSHGKTTTT 124
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
S+++ +L G D T +VG + G++ G + FV EA EY FL P +AV+
Sbjct: 125 SLISVILDRAGYDPTVLVGGEIDAIG-GNVRVGKSEYFVTEACEYTDSFLKFYPYIAVIL 183
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N+D +H+D F++ D +K FR+F + G +V C D ++
Sbjct: 184 NVDSDHLDYFKNIDNIKQSFRQFASLVPSDGFVVACKDDANTMHVI-------------- 229
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+G + I+TYG + +DW A+ + + +G + + + RG+ + L I
Sbjct: 230 -----------KGLEKNIVTYGINEKSDWQAKDITYDEKGCASFNVYYRGKFIGHFKLSI 278
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG HN+ N+LA +A L D ++ E I +F G RRF++ G + G + D
Sbjct: 279 PGKHNIYNALASLAVTYLLGVDTEKAKEYI-------KEFKGTHRRFEVKGVVEGVTVVD 331
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHP E+ A L+AA+ +P+K +IA+FQPHTYSR L DFA + AD+++++ +
Sbjct: 332 DYAHHPAEIHATLEAAKN-YPHKRIIAIFQPHTYSRTKALLSDFAESFDAADKIIITDI 389
>gi|424866315|ref|ZP_18290156.1| UDP-N-acetylmuramate--L-alanine ligase [Leptospirillum sp. Group II
'C75']
gi|124515887|gb|EAY57396.1| UDP-N-acetylmuramate--L-alanine ligase [Leptospirillum rubarum]
gi|387223112|gb|EIJ77484.1| UDP-N-acetylmuramate--L-alanine ligase [Leptospirillum sp. Group II
'C75']
Length = 464
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 158/418 (37%), Positives = 225/418 (53%), Gaps = 42/418 (10%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
HFVGIGG+G++ +A++ L +G VSGSD + L E GA + +GH + D
Sbjct: 10 HFVGIGGNGMAPVAEILLSRGALVSGSDKTQTDLTRRLSELGARVFVGHRAEQVGAVD-- 67
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
AVV S+AI Q+N E+L A+ +G+P+ R LA + + +AV+GSHGK+TT SM
Sbjct: 68 ----AVVISTAISQENPELLEARRLGIPVVHRGEALAGIMRGFQGVAVAGSHGKTTTTSM 123
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
+A+VL G D T +VG VP F G+ G F+ E+DE DG FL +SP VAVVTN+
Sbjct: 124 IAHVLAHGGLDPTCVVGGRVPGF-GGNARVGKKNIFIAESDESDGSFLKISPHVAVVTNV 182
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVV 318
D EH+D ++ D +K+ F RFL + G V C D ++L +
Sbjct: 183 DQEHLDYYQSFDQLKAAFERFLTSVPPEGLAVACLDDPELSNILPSL------------- 229
Query: 319 SNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPLAQISLQIP 377
++ W TYGFS D V + +G + + + RG+ + L +P
Sbjct: 230 ---NAPHW---------TYGFSPAADVVGSDV--SAEGLSTSFSVRLRGKDIGTFVLNVP 275
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD 437
GVHNVLN+LA IA V G + + C + L +F GV RRF +G G I DD
Sbjct: 276 GVHNVLNALATIA-VAHHFGLEAE------CAREALERFRGVGRRFTQVGEEGGIRIVDD 328
Query: 438 FAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
+ HHPTE+ L AARQ +P++ L+ FQPH +SR L FA+A AD +V+ +
Sbjct: 329 YGHHPTEIGVTLAAARQAYPDRRLVVAFQPHRFSRTRDLLSRFASAFQLADVLVLGEI 386
>gi|392375342|ref|YP_003207175.1| UDP-N-acetyl-muramate:alanine ligase, L-alanine adding enzyme
[Candidatus Methylomirabilis oxyfera]
gi|258593035|emb|CBE69346.1| UDP-N-acetyl-muramate:alanine ligase, L-alanine adding enzyme
[Candidatus Methylomirabilis oxyfera]
Length = 475
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 153/419 (36%), Positives = 231/419 (55%), Gaps = 43/419 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+S +A++ G++VSGSDL S + L G + IGH +++Q D
Sbjct: 8 IHFVGIGGVGMSGIAEVLHNLGYQVSGSDLKVSEHAHRLQSLGITVQIGHDPAHVQEAD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSA+ +N EI+ AK+ +P+ +R LA+L +AV+G+HGK+TT S
Sbjct: 67 -----VVVRSSAVSPENPEIVAAKAHAIPVIQRAEMLAELMRMKYGVAVAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A VL G D T ++G + + G G+ V EADE DG FL L+P++AVVT
Sbjct: 122 MVATVLAKAGLDPTVVIGGRLDALGSNAKL-GRGEFMVAEADESDGSFLKLAPTIAVVTT 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D EH+D + D +K F F+ ++ G ++C D + R LL +++
Sbjct: 181 VDAEHLDYYRDLQQIKETFLEFINKVPFYGSAILCLDQEHIRDLLPMVQK---------- 230
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPLAQISLQI 376
++++YG + D AE V ++ G S + + +G PL ++ L+I
Sbjct: 231 ---------------RVVSYGCHTQADLMAEGV--SLTGLSSTFKVRFKGEPLGEVQLRI 273
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PGVHNV N+LA +A L L A ++ L +F GV RRF + G+ + D
Sbjct: 274 PGVHNVSNALAAMAVGLEL-------DIEFAAIRTALGEFSGVVRRFQVKGSPQDIMVVD 326
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHP E++A L+AAR F + LI +FQPH YSR L +FA+A ADQV+++ +
Sbjct: 327 DYAHHPAEIQATLKAARDGF-GRRLIVIFQPHRYSRTQRLLPEFASAFDFADQVIITGI 384
>gi|402833311|ref|ZP_10881930.1| UDP-N-acetylmuramate--L-alanine ligase [Selenomonas sp. CM52]
gi|402280622|gb|EJU29323.1| UDP-N-acetylmuramate--L-alanine ligase [Selenomonas sp. CM52]
Length = 457
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 155/418 (37%), Positives = 228/418 (54%), Gaps = 41/418 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+SALA + L++G+EV+GSDL S+ +E L GA++H GH N+ G +
Sbjct: 8 IHFVGIGGAGMSALAHILLEKGYEVTGSDLGSSALIEQLKGLGAHIHHGHRSENVHGAE- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
A+V S+AIP+ N EI+ A +G+ + R A L IAV+G+HGK+TT S
Sbjct: 67 -----AIVVSTAIPETNPEIVEAARLGLRRFHRSDINAALLNAAKGIAVAGAHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
ML L G T I+G V G+ G G+ V EADE DG FL L P +AVVTN
Sbjct: 122 MLGVALDHAGISPTIIIGGEVDVL-GGNAKLGKGEYLVSEADESDGSFLKLRPHIAVVTN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
++ +H+D + ++ FR FL+ I+ GGH V+C D++ R + +
Sbjct: 181 IEDDHLDHYGTLANIRKAFREFLENIKPGGHAVLCFDNENVRDIAQTL------------ 228
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
D K+I+Y D+ A + + G D+ + +G+ L ++ L +P
Sbjct: 229 -------------DRKVISYAIDHEADYRAGKIEMH-GAGVDFSVLHKGKDLGRVRLNLP 274
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD 437
G HNVL++LA + T L+ IG ++ + L+ F G RRF G + + DD
Sbjct: 275 GRHNVLDALATVVTGLS-IG------LTVEQMAAGLALFHGAKRRFQTKGRVQDVWVVDD 327
Query: 438 FAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
+AHHPTE+ L AARQ P + +I FQPH YSR +L +F A EAD +V++ +
Sbjct: 328 YAHHPTEIATTLLAARQTKPRR-IICAFQPHRYSRTKLLAAEFGGAFREADVLVLTDI 384
>gi|332295509|ref|YP_004437432.1| UDP-N-acetylmuramate--L-alanine ligase [Thermodesulfobium narugense
DSM 14796]
gi|332178612|gb|AEE14301.1| UDP-N-acetylmuramate--L-alanine ligase [Thermodesulfobium narugense
DSM 14796]
Length = 478
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 157/425 (36%), Positives = 232/425 (54%), Gaps = 41/425 (9%)
Query: 72 KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSN 131
KN K + F+GIGG+G+SALA L+ G +SGSD S + L + G N++IGHS N
Sbjct: 6 KNLK-KVFFIGIGGTGMSALAFFLLEDGKIISGSDKKESRSLLKLKQKGVNIYIGHSPDN 64
Query: 132 IQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHG 191
I S+ +AVV S AIP DN E+L A+ +P+ R L+K+ E+ IAV+G+HG
Sbjct: 65 I-----SKDVDAVVYSGAIPSDNCELLSARQRNIPVLSRAQMLSKIIEQKFSIAVAGTHG 119
Query: 192 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPS 251
K+TT SM++ +L G D + ++G + + + +G G V+EADE DG FL P+
Sbjct: 120 KTTTTSMISKMLNDGGLDPSFLIGGELNDYG-ANARHGSGPYIVIEADESDGSFLNYKPN 178
Query: 252 VAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
+AV+TN+D++H F D V+ F +F++ I G LV+CGD RS+ ++I +
Sbjct: 179 IAVITNIDFDHPSFFSDLKMVEDYFEKFMQGISEDGKLVVCGDHAVTRSVAERITDKEKI 238
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQ 371
Y G N Q +I GF S+ D Y E G + +
Sbjct: 239 FYGFG--DNN------QVQCKNVILSGFGSYYDLYIE-----------------GEKIGE 273
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG 431
I+L +PG+HNVLNSLA + + D + +SIA F GV RRF+L
Sbjct: 274 ITLNVPGIHNVLNSLAAFSVAKIIGLDFVSAFDSIAS-------FSGVRRRFEL--KCKD 324
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+I DD+AHHP E+ AVL AR F +K L+ +FQPH +SR ++F + L++AD ++
Sbjct: 325 PYIIDDYAHHPEEINAVLNTARSIFKDKNLVLIFQPHRFSRTEKFLNNFCDILTKADTLL 384
Query: 492 VSAVL 496
+ V
Sbjct: 385 LFDVF 389
>gi|162449936|ref|YP_001612303.1| UDP-N-acetylmuramate-alanine ligase [Sorangium cellulosum So ce56]
gi|189082502|sp|A9FI59.1|MURC_SORC5 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|161160518|emb|CAN91823.1| UDP-N-acetylmuramate-alanine ligase [Sorangium cellulosum So ce56]
Length = 469
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 155/428 (36%), Positives = 232/428 (54%), Gaps = 44/428 (10%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
F+ R +HFVGIGG G+S LA++ FEVSGSDL SS L G + IGH
Sbjct: 2 FRGRVRHVHFVGIGGVGMSGLAEILRSLEFEVSGSDLKESSTTRRLTSLGVRIDIGHRAE 61
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N++G D VV SSAI +N E+ A+++G P+ R LA+L +A++GSH
Sbjct: 62 NVRGVD------VVVYSSAIRPENPELTEARALGTPVIGRAEMLAELMRVKYGVAIAGSH 115
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S++A VL+A G D T +VG + + G G V EADE DG FL L+P
Sbjct: 116 GKTTTTSLVATVLRAAGLDPTVVVGGKMAALGTNARL-GAGDLLVAEADESDGSFLRLTP 174
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
++AVVTN+D EH+D + + +K F F ++ G V+C D + LL +I +
Sbjct: 175 TIAVVTNIDPEHLDHYGTHERIKDAFVEFAARVPFYGLAVLCLDHPHVQDLLPRIPR--- 231
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPL 369
+ +TYG S +D+ A + +G + + RG PL
Sbjct: 232 ----------------------RHVTYGVSPQSDYSARGI--QFRGLETSFNAYRRGEPL 267
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
++++PG HNVLN LA IA + D+ + + K L+ F GV+RRF ++G+I
Sbjct: 268 GGFTVKMPGAHNVLNCLATIA-----VADELEV--PLDVTKQALATFGGVARRFTVVGSI 320
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFP--NKALIAVFQPHTYSRLVVLKDDFANALSEA 487
G + DD+ HHP E+RA + AAR+ FP + ++ FQPH ++R L D+F A ++A
Sbjct: 321 GGVTMIDDYGHHPAEIRATIDAARRAFPGEDHRVVVAFQPHRHTRTRDLFDEFTRAFNQA 380
Query: 488 DQVVVSAV 495
D ++V+ +
Sbjct: 381 DVLLVTDI 388
>gi|251798403|ref|YP_003013134.1| UDP-N-acetylmuramate--L-alanine ligase [Paenibacillus sp. JDR-2]
gi|247546029|gb|ACT03048.1| UDP-N-acetylmuramate/alanine ligase [Paenibacillus sp. JDR-2]
Length = 462
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 141/424 (33%), Positives = 237/424 (55%), Gaps = 39/424 (9%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
N +HF+GIGG G+SA+A++ L+ G++++GSD+ E L GA ++IGH ++
Sbjct: 2 NTAEHVHFIGIGGYGMSAIARVMLEMGYKITGSDVARQELTEKLAAKGAQIYIGHEAEHV 61
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
+G D VV S+A+ +DNVE + A+ + +P+ R LA+L +AV+G+HGK
Sbjct: 62 KGAD------LVVYSTALSKDNVERMAAEELNIPVLHRAQMLARLMNAGKGVAVAGAHGK 115
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+TT+SM+A V++ D T I+G + + G G+ V EADE DG FL PS+
Sbjct: 116 TTTSSMIALVMEKCDADPTYIIGGEIVNVGTNA-KAGKGEYVVAEADESDGSFLQYHPSI 174
Query: 253 AVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
A+VTN++ +H++ ++ D +K+ + +FL Q++ G ++C D + LL ++ DT
Sbjct: 175 AIVTNIEPDHLENYDGDFGKLKAAYVKFLSQVKENGKAIVCADDETITELLPKLDADTA- 233
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQ 371
K+ITYG S +++ AE++ + S + + RG L
Sbjct: 234 --------------------SKLITYGIDSDSEYKAENISLGDRKVS-FEMTHRGTTLGT 272
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG 431
+ L +PG HNV N++A + T L ++ S + + +F+G RRF ++G +
Sbjct: 273 LELSVPGRHNVYNAMATVITCL-------EAGLSFDNIAKAIHEFIGAKRRFQVLGEVND 325
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+AHHPTE++A + AA+ K +IAVFQP Y+R L + F+ A EAD+V+
Sbjct: 326 ILVIDDYAHHPTEIQATISAAKA--TGKRIIAVFQPQRYTRTFFLLEQFSRAFPEADEVI 383
Query: 492 VSAV 495
++ +
Sbjct: 384 ITDI 387
>gi|414154504|ref|ZP_11410822.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
gi|411453901|emb|CCO08726.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
Length = 459
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 163/421 (38%), Positives = 228/421 (54%), Gaps = 45/421 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A + L G VSGSD +S+ +E L GA ++GH +I
Sbjct: 8 IHFVGIGGAGMSGIATVLLGMGCRVSGSDAKYSAVLERLQSLGAKCYVGHEAGHI----- 62
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
R + VV S+AI DN E+L A +G+P+ KR LA+L + IAV+G+HGK+TT S
Sbjct: 63 DRDIDTVVISTAISPDNPEVLAANRLGIPLVKRGEMLARLMQSKQGIAVAGAHGKTTTTS 122
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M A VL+ G D T ++G + + G+ G G+ + EADE DG FL L P VAVVTN
Sbjct: 123 MTALVLEDNGLDPTILIGGDLSKI-GGNAKLGRGELLLAEADESDGSFLLLEPQVAVVTN 181
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
++ +H+D + ++ + FR FL ++ G VIC D D LK G
Sbjct: 182 IEDDHLDYYGSQEKLTEAFRAFLNKVPQHGVAVICLD-------------DPVLKQMRGS 228
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE---RGRPLAQISL 374
++ +ITYG D A+ V +++G + E RG L ++L
Sbjct: 229 LT------------CPLITYGS---QDAGADYVLHSLKGKDGFNCGEVYYRGEKLGTLAL 273
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHI 434
Q+PG HN+LN+LA +A R + A + L F G RRF LIG G +
Sbjct: 274 QVPGYHNLLNALAAVAV-------GRYLGLTFAQITNALRTFQGAKRRFQLIGEAGGVQV 326
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSA 494
DD+AHHPTEV+A LQAAR P + +IAVFQPH YSR L +F + +AD VV +
Sbjct: 327 VDDYAHHPTEVKATLQAARSVHPGR-IIAVFQPHRYSRTRQLYREFGQSFGQADLVVFTD 385
Query: 495 V 495
+
Sbjct: 386 I 386
>gi|222530360|ref|YP_002574242.1| UDP-N-acetylmuramate--L-alanine ligase [Caldicellulosiruptor bescii
DSM 6725]
gi|254763736|sp|B9MND8.1|MURC_ANATD RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|222457207|gb|ACM61469.1| UDP-N-acetylmuramate/alanine ligase [Caldicellulosiruptor bescii
DSM 6725]
Length = 455
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 152/417 (36%), Positives = 241/417 (57%), Gaps = 41/417 (9%)
Query: 80 FVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSR 139
F+GIGG +SA+A + QGF V GSD+ S+ + L E G N++IGH S+I G++
Sbjct: 6 FIGIGGISMSAIALILKNQGFWVEGSDMQESATTKMLRENGINVYIGHDESHIHGDE--- 62
Query: 140 FPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKSTTASM 198
V+ ++AI +DN E+L AK + + IY+R +L L + + N+I +SG+HGK+TT SM
Sbjct: 63 ---TVIYTAAISKDNPELLAAKRMNLKIYERAEFLGLLMKDFKNVITISGTHGKTTTTSM 119
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
+ Y+LK + T +VGA V Q G+ G + V+EA EY FL +P++ V+ N+
Sbjct: 120 IGYILKKANYNPTVLVGAFVKQLG-GNFVIGSKEYLVVEACEYVDSFLKFNPTIGVILNI 178
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVV 318
D +H+D F+D D++K+ F++F ++I G LV+ D + + +++Q+ +
Sbjct: 179 DNDHLDYFKDIDSIKNSFKKFAQKIPTSGFLVVNYDDKNVKDIINQLNTQIIC-----IS 233
Query: 319 SNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPG 378
+ + +D++ S +D Y E +V+ +D I LA I L IPG
Sbjct: 234 TKEKTDIFADN----------ISCSDGYYEF---DVKNNNDEI-------LAHIKLNIPG 273
Query: 379 VHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDF 438
HNV N+LA A L ESI ++ LS+F G SRR + +G G ++YDD+
Sbjct: 274 FHNVYNALAAFAVASKL------GVESIT-IEQALSEFRGASRRLEKVGEFNGIYLYDDY 326
Query: 439 AHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
AHHPTE++A L A ++ ++A+FQPHT+SRL L ++FA +L AD+V+V+ V
Sbjct: 327 AHHPTEIKATL-ATLKKISEGKVLAIFQPHTFSRLKTLLNEFAESLQLADKVIVTDV 382
>gi|336325349|ref|YP_004605315.1| UDP-N-acetylmuramate--L-alanine ligase [Corynebacterium resistens
DSM 45100]
gi|336101331|gb|AEI09151.1| UDP-N-acetylmuramate-L-alanine ligase [Corynebacterium resistens
DSM 45100]
Length = 481
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 160/432 (37%), Positives = 232/432 (53%), Gaps = 48/432 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H VGIGG+G+S +A++ L +G V+GSD+ S + L AGA ++IGHS +N+ G
Sbjct: 10 VHMVGIGGAGMSGIARILLARGSTVTGSDMKDSRSILALRTAGATVNIGHSAANLTA--G 67
Query: 138 SRFPNAVVAS-SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
P VV S +AIPQDN E+ A+ +P+ +R LA+L ++G+HGK++T
Sbjct: 68 GELPTVVVTSFAAIPQDNPELSAARDNNIPVVRRSDVLAQLMVDRRAFLLAGTHGKTSTT 127
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM L+A G D + +G + + + +G G FV EADE DG FL P VAVVT
Sbjct: 128 SMAVAALQAAGWDPSFAIGGQLNRAGTNA-HHGTGDVFVAEADESDGSFLSYQPEVAVVT 186
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F E+A + +F RF + GG LV+C D +R+L +
Sbjct: 187 NVEPDHLDYFGTEEAYREVFERFAGCVVTGGTLVVCLDDAGSRALAQSL----------- 235
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS---DYILCERGRPLA--- 370
S + DY+I+ YG + A P V+ G+ D + G ++
Sbjct: 236 -----SRSIPADERDYRILGYGTRA-----AVEDAPEVEAGAIIEDMRITPAGTEVSVRF 285
Query: 371 -------QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRF 423
+ + IPG H VLN+ A + L D + E IA +F GV RRF
Sbjct: 286 FDDEAPRVLRVAIPGSHMVLNATAAVLGGALLGADIDKLLEGIA-------EFDGVRRRF 338
Query: 424 DLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKA---LIAVFQPHTYSRLVVLKDDF 480
+ G++ H+YDD+AHHPTEV AVL AAR+R + +IAVFQPH YSR + D+F
Sbjct: 339 EYHGSVNDVHVYDDYAHHPTEVTAVLSAARERIEAQGKGRVIAVFQPHLYSRTMTFADEF 398
Query: 481 ANALSEADQVVV 492
A ALS AD+VV+
Sbjct: 399 AAALSLADEVVL 410
>gi|260886503|ref|ZP_05897766.1| UDP-N-acetylmuramate--alanine ligase [Selenomonas sputigena ATCC
35185]
gi|330839653|ref|YP_004414233.1| UDP-N-acetylmuramate--L-alanine ligase [Selenomonas sputigena ATCC
35185]
gi|260863646|gb|EEX78146.1| UDP-N-acetylmuramate--alanine ligase [Selenomonas sputigena ATCC
35185]
gi|329747417|gb|AEC00774.1| UDP-N-acetylmuramate--L-alanine ligase [Selenomonas sputigena ATCC
35185]
Length = 457
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 155/419 (36%), Positives = 228/419 (54%), Gaps = 43/419 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+SALA + L++G+EV+GSDL S+ +E L GA++H GH N+ G +
Sbjct: 8 IHFVGIGGAGMSALAHILLEKGYEVTGSDLGSSALIEQLKGLGAHIHHGHRAENVHGAE- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
A+V S+AIP+ N EI+ A +G+ + R A L IAV+G+HGK+TT S
Sbjct: 67 -----AIVVSTAIPETNPEIVEAARLGLRRFHRSDINAALLNAAKGIAVAGAHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
ML L G T I+G V G+ G G+ V EADE DG FL L P +AVVTN
Sbjct: 122 MLGVALDHAGISPTIIIGGEVDVL-GGNAKLGKGEYLVSEADESDGSFLKLRPHIAVVTN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
++ +H+D + ++ FR FL+ I+ GGH V+C D++ R + + +
Sbjct: 181 IEDDHLDHYGTLANIRKAFREFLENIKPGGHAVLCFDNENVRDIAQTLGR---------- 230
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPLAQISLQI 376
K+I+Y D+ A + + G G D+ + G+ L ++ L +
Sbjct: 231 ---------------KVISYAIDHEADYRAGKI--EMHGAGVDFSVLHEGKDLGRVRLNL 273
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG HNVL++LA + T L+ IG ++ + L+ F G RRF G + + D
Sbjct: 274 PGRHNVLDALATVVTGLS-IG------LTVEQMAAGLALFHGAKRRFQTKGRVQDVWVVD 326
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHPTE+ L AARQ P + +I FQPH YSR +L +F A EAD +V++ +
Sbjct: 327 DYAHHPTEIATTLLAARQTKPRR-IICAFQPHRYSRTKLLAAEFGGAFREADVLVLTDI 384
>gi|416999139|ref|ZP_11939808.1| UDP-N-acetylmuramate--L-alanine ligase [Veillonella parvula
ACS-068-V-Sch12]
gi|333977292|gb|EGL78151.1| UDP-N-acetylmuramate--L-alanine ligase [Veillonella parvula
ACS-068-V-Sch12]
Length = 460
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 145/418 (34%), Positives = 234/418 (55%), Gaps = 40/418 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH +GIGGSG+ A+A + +++G++VSGSD+ S+ + + GA +HIGH+ + G D
Sbjct: 8 IHLIGIGGSGMRAIANILIQKGYDVSGSDIAESAVISKFRDMGATVHIGHNKEYVNGVD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
A+V S+AI +DN EI+ AK G+ I R + + + + IAV+G+HGK++T S
Sbjct: 67 -----AIVRSTAIREDNPEIVAAKEQGITILHRSDIVKAVLDVTDGIAVAGAHGKTSTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+ +L D T I+G V + GS G G V+EADE DG FL L P V+TN
Sbjct: 122 MIGQILVEANADPTVIIGGEV-DYLKGSSCLGKGHFSVVEADESDGSFLKLRPHTIVITN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
++ +H+D ++ D + + F F++ + G ++CGD++ R ++ ++K+
Sbjct: 181 IEDDHMDHYKTMDNLLNAFCEFVETLPEAGKAIVCGDNENIRYIMSRVKR---------- 230
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
ITYG ND+ A+++ V Y + +G +++ISL++P
Sbjct: 231 ---------------TFITYGLEDNNDYVAKNI-HYVDSSLVYDVYHKGINISRISLRVP 274
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD 437
G HNVLNSLA G + + + L KF+G RRF+ G + G + DD
Sbjct: 275 GEHNVLNSLAAFIVAHECCGVENR------FITKALGKFIGAKRRFETKGHVAGVWVVDD 328
Query: 438 FAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
+AHHPTE++A L+AA++ +I VFQPH Y+R +LKD+FA A + AD++ ++ +
Sbjct: 329 YAHHPTEIKATLRAAKE-LEKHRVICVFQPHRYTRTSLLKDEFATAFTSADEIYMTDI 385
>gi|366163468|ref|ZP_09463223.1| UDP-N-acetylmuramate--L-alanine ligase [Acetivibrio cellulolyticus
CD2]
Length = 469
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 147/430 (34%), Positives = 239/430 (55%), Gaps = 43/430 (10%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
++D KN K +HF+GIGG +S LA++ G+ VSGSD+ S+ E L G +HIGH
Sbjct: 6 LLDSKNIK-TVHFIGIGGISMSGLAEILKNIGYTVSGSDMKASNMTEKLERDGIKIHIGH 64
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAV 186
S NI D VV ++A+ ++N E++ A+ +G+ +R L ++ +KY +A+
Sbjct: 65 SEENIDNCD------LVVYTAAVKENNSELVKARQLGITTIERAVLLGQIMKKYPFSLAI 118
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
SG+HGK+TT SM++ ++ D T +G + G+ GG K F+ EA EY FL
Sbjct: 119 SGTHGKTTTTSMVSMIMLESNLDPTIHIGGELDAIG-GNTRIGGNKYFITEACEYVESFL 177
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 306
P++A+V N++ +H+D F+D + +K F +F+ + G+++ C D + S+L QI
Sbjct: 178 KFYPTLAIVLNIEEDHLDYFKDINHIKQAFLKFMNLVPKDGYIIACADDENVSSILSQIS 237
Query: 307 QDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFN-DWYAESVCPNVQGGSDYILCER 365
+ ++TYG +S N W A ++ + G + Y L +
Sbjct: 238 TN-------------------------VVTYGINSTNATWTARNIEFDDSGCASYDLIKS 272
Query: 366 GRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
G+ +A I L++PG+HNV NS+A A TL D I ++ L F G RRF++
Sbjct: 273 GQKVAAIKLRVPGIHNVSNSIAAAAACYTLGCD-------IKDIEHGLEAFTGTHRRFEV 325
Query: 426 IGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
G + + DD+AHHP+E++A L+AA+ K + VFQPHTY+R +L D+F+ A S
Sbjct: 326 KGVVENIKVVDDYAHHPSEIKATLKAAKSTNHTK-IWCVFQPHTYTRTKLLLDEFSEAFS 384
Query: 486 EADQVVVSAV 495
+AD+V++S +
Sbjct: 385 DADEVIISDI 394
>gi|169831592|ref|YP_001717574.1| UDP-N-acetylmuramate--L-alanine ligase [Candidatus Desulforudis
audaxviator MP104C]
gi|169638436|gb|ACA59942.1| UDP-N-acetylmuramate--alanine ligase [Candidatus Desulforudis
audaxviator MP104C]
Length = 455
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 155/418 (37%), Positives = 225/418 (53%), Gaps = 42/418 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HFVGIGG+G+S +A + L G+ VSGSDL S + L GA + GHS S++ +
Sbjct: 8 VHFVGIGGAGMSGIAMVLLDHGYMVSGSDLKKSEVTDKLQMLGARVFYGHSPSHVGAAE- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSAIP DN E++ A+ G+P+ R L +L ++ IAV+G+HGK+TT S
Sbjct: 67 -----LVVYSSAIPPDNPELVIARKRGLPVIPRAEMLGRLMHQWKGIAVAGAHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A++L+ G D T I+G + F G+ GGG+ V EADE DG F L PS+ +VTN
Sbjct: 122 LVAFLLERTGLDPTVIIGGEMNGF--GNAKAGGGEYLVAEADESDGSFSLLHPSIVIVTN 179
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
++ +H+D + DA++ FR F+ ++ G V+ D R + ++
Sbjct: 180 VEDDHLDYYRTVDAIRRAFREFIFKVPRDGVAVLNYDDPFLRQMAHELP----------- 228
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
+ +ITYG + D+ N S + R L + L IP
Sbjct: 229 --------------FPVITYGCAPDADYRLAGFHLNCAVSSAEVYWRR-ELLGRFELTIP 273
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD 437
G HN+LN+LAV+A R + L F GV RRF+L+G G + DD
Sbjct: 274 GRHNLLNALAVVAV-------GRHLGLEFPEIARALRDFRGVRRRFELVGESRGVRVVDD 326
Query: 438 FAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
+AHHPTE++A L+AARQ P K LIAVFQPH Y+R L +F A + ADQV++S +
Sbjct: 327 YAHHPTEIKATLEAARQTRP-KRLIAVFQPHRYTRTKFLHAEFGKAFTAADQVLLSRI 383
>gi|332799095|ref|YP_004460594.1| UDP-N-acetylmuramate--L-alanine ligase [Tepidanaerobacter
acetatoxydans Re1]
gi|438002206|ref|YP_007271949.1| UDP-N-acetylmuramate--alanine ligase [Tepidanaerobacter
acetatoxydans Re1]
gi|332696830|gb|AEE91287.1| UDP-N-acetylmuramate--L-alanine ligase [Tepidanaerobacter
acetatoxydans Re1]
gi|432179000|emb|CCP25973.1| UDP-N-acetylmuramate--alanine ligase [Tepidanaerobacter
acetatoxydans Re1]
Length = 468
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 145/420 (34%), Positives = 238/420 (56%), Gaps = 45/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG+G+S +AK+ + G+ VSGSDL S + L +AGA + IGH+ SN++G D
Sbjct: 8 IHFIGIGGTGMSGIAKILMNMGYTVSGSDLKVSEALIRLRDAGARVFIGHNASNVEGAD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSAIP+ N E + A +P+ R L+ L IA++G+HGK+TT S
Sbjct: 67 -----IVVVSSAIPKANPEYIRAIESNIPVIHRADMLSLLMTPKKGIAITGAHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M++ +++ G D T I+G + G+ G G+ V EADE DG F+ L P +AV+TN
Sbjct: 122 MISLIMEKNGFDPTVIIGGELNDI-GGNATLGKGEYLVAEADESDGSFMKLHPHIAVITN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
++ +H+D +++ +++K F++F+ + G ++ D++ + L+ ++T +Y
Sbjct: 181 IENDHMDYYKNMNSMKKAFKKFIDNVNKDGFIIFGNDNKHVQELV----KETNKEY---- 232
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLAQISLQ 375
T G + +D+ A++V N G + + +C R + L ++ L
Sbjct: 233 -----------------YTVGINYPSDFMAKNVKMN---GLITHFDVCFREKLLGKVELH 272
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
+PG+HN+LN+ IA + D E+I F GV RRF +I I G +
Sbjct: 273 VPGLHNILNATTAIAVGNRIGIDMEGMIEAIKT-------FRGVQRRFQIISDIRGIKVI 325
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHPTE++A L+AAR P K + A+FQPH Y+R +L ++F A +AD+V+++++
Sbjct: 326 DDYAHHPTEIKATLRAARNCNP-KKIYAIFQPHRYTRTQLLAEEFGAAFIDADEVIITSI 384
>gi|294792040|ref|ZP_06757188.1| UDP-N-acetylmuramate--alanine ligase [Veillonella sp. 6_1_27]
gi|294457270|gb|EFG25632.1| UDP-N-acetylmuramate--alanine ligase [Veillonella sp. 6_1_27]
Length = 460
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 145/418 (34%), Positives = 234/418 (55%), Gaps = 40/418 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH +GIGGSG+ A+A + +++G++VSGSD+ S+ + + GA +HIGH+ + G D
Sbjct: 8 IHLIGIGGSGMRAIANILIQKGYDVSGSDIAESAVISKFRDMGATVHIGHNKEYVNGVD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
A+V S+AI +DN EI+ AK G+ I R + + + + IAV+G+HGK++T S
Sbjct: 67 -----AIVRSTAIREDNPEIVAAKEQGITILHRSDIVKAVLDVTDGIAVAGAHGKTSTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+ +L D T I+G V + GS G G V+EADE DG FL L P V+TN
Sbjct: 122 MIGQILVEANADPTVIIGGEV-DYLKGSSCLGKGHFSVVEADESDGSFLKLHPHTIVITN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
++ +H+D ++ D + + F F++ + G ++CGD++ R ++ ++K+
Sbjct: 181 IEDDHMDHYKTMDNLLNAFCEFVETLPEAGKAIVCGDNENIRYVMSRVKR---------- 230
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
ITYG ND+ A+++ V Y + +G +++ISL++P
Sbjct: 231 ---------------TFITYGLEDNNDYVAKNI-HYVDSSLVYDVYHKGINISRISLRVP 274
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD 437
G HNVLNSLA G + + + L KF+G RRF+ G + G + DD
Sbjct: 275 GEHNVLNSLAAFIVAHECCGVENR------FITKALGKFIGAKRRFETKGHVAGVWVVDD 328
Query: 438 FAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
+AHHPTE++A L+AA++ +I VFQPH Y+R +LKD+FA A + AD++ ++ +
Sbjct: 329 YAHHPTEIKATLRAAKE-LEKHRVICVFQPHRYTRTSLLKDEFATAFTSADEIYMTDI 385
>gi|269798173|ref|YP_003312073.1| UDP-N-acetylmuramate--L-alanine ligase [Veillonella parvula DSM
2008]
gi|282850402|ref|ZP_06259781.1| UDP-N-acetylmuramate--L-alanine ligase [Veillonella parvula ATCC
17745]
gi|269094802|gb|ACZ24793.1| UDP-N-acetylmuramate/alanine ligase [Veillonella parvula DSM 2008]
gi|282579895|gb|EFB85299.1| UDP-N-acetylmuramate--L-alanine ligase [Veillonella parvula ATCC
17745]
Length = 460
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 145/418 (34%), Positives = 234/418 (55%), Gaps = 40/418 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH +GIGGSG+ A+A + +++G++VSGSD+ S+ + + GA +HIGH+ + G D
Sbjct: 8 IHLIGIGGSGMRAIANILIQKGYDVSGSDIAESAVISKFRDMGATVHIGHNKEYVNGVD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
A+V S+AI +DN EI+ AK G+ I R + + + + IAV+G+HGK++T S
Sbjct: 67 -----AIVRSTAIREDNPEIVAAKEQGITILHRSDIVKAVLDVTDGIAVAGAHGKTSTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+ +L D T I+G V + GS G G V+EADE DG FL L P V+TN
Sbjct: 122 MIGQILVEANADPTVIIGGEV-DYLKGSSCLGKGHFSVVEADESDGSFLKLHPHTIVITN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
++ +H+D ++ D + + F F++ + G ++CGD++ R ++ ++K+
Sbjct: 181 IEDDHMDHYKTMDNLLNAFCEFVETLPEAGKAIVCGDNENIRYVMSRVKR---------- 230
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
ITYG ND+ A+++ V Y + +G +++ISL++P
Sbjct: 231 ---------------TFITYGLEDNNDYVAKNI-HYVDSSLVYDVYHKGINISRISLRVP 274
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD 437
G HNVLNSLA G + + + L KF+G RRF+ G + G + DD
Sbjct: 275 GEHNVLNSLAAFIVAHECCGVENR------FITKALGKFIGAKRRFETKGHVAGVWVVDD 328
Query: 438 FAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
+AHHPTE++A L+AA++ +I VFQPH Y+R +LKD+FA A + AD++ ++ +
Sbjct: 329 YAHHPTEIKATLRAAKE-LEKHRVICVFQPHRYTRTSLLKDEFATAFTSADEIYMTDI 385
>gi|193214550|ref|YP_001995749.1| UDP-N-acetylmuramate--L-alanine ligase [Chloroherpeton thalassium
ATCC 35110]
gi|193088027|gb|ACF13302.1| UDP-N-acetylmuramate/alanine ligase [Chloroherpeton thalassium ATCC
35110]
Length = 470
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 154/422 (36%), Positives = 233/422 (55%), Gaps = 44/422 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H +GIGG+G+SA+A++ L QGF V+GSDLV S L GA + IGH NI G D
Sbjct: 11 VHLIGIGGAGMSAIAEVLLNQGFIVTGSDLVESEVTRRLRHCGATIFIGHDRDNISGAD- 69
Query: 138 SRFPNAVVASSAI-PQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
+V SSA+ P+ N E+ A + +P+ KRD L +L + I ++G+HGK+TT
Sbjct: 70 -----VIVHSSAVKPEMNEEVQEAFARQIPVIKRDEMLGELMRRKAGICIAGTHGKTTTT 124
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
+M+ +LK +D T I+G + + +GS G G V+EADEYD FL L+P++ V+T
Sbjct: 125 TMVGTMLKECHEDPTVIIGG-ISDYFNGSAVVGNGNYMVIEADEYDRTFLKLTPTIGVIT 183
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
L+ EH+DI++D D +K F +F + G ++ C D ++L + +
Sbjct: 184 TLEAEHLDIYKDLDDLKQAFVQFANTVPFYGAVICCIDEPAIAAILPCLNR--------- 234
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++ITYG + + A+ V + + + + + G+PL ++ L+
Sbjct: 235 ----------------RVITYGLTPEAELQAKEVVFHGKT-AHFTVTHLGKPLGKLELKA 277
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI---GTIYGCH 433
PG+HNV N+LA +A L L +SI L+ F V RRF + G G
Sbjct: 278 PGLHNVKNALATVAVGLEL----GLEFDSIC---RALASFQAVRRRFHVKYSDGEPNGLM 330
Query: 434 IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVS 493
+ DD+AHHPTEVRA L+AAR +P LIAVFQPH +SR D+F AL+ AD+++V+
Sbjct: 331 VIDDYAHHPTEVRATLEAARLGWPKHHLIAVFQPHLFSRTQTFADEFGKALALADEIIVT 390
Query: 494 AV 495
V
Sbjct: 391 DV 392
>gi|253575689|ref|ZP_04853025.1| UDP-N-acetylmuramate-alanine ligase [Paenibacillus sp. oral taxon
786 str. D14]
gi|251845027|gb|EES73039.1| UDP-N-acetylmuramate-alanine ligase [Paenibacillus sp. oral taxon
786 str. D14]
Length = 458
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 160/460 (34%), Positives = 240/460 (52%), Gaps = 55/460 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG G+SA+A++ L+ G+ V+GSD+ E L GA ++IGH+ ++ G D
Sbjct: 9 VHFIGIGGYGMSAIARVMLEMGYTVTGSDVASQELTEKLAAKGAKIYIGHTAEHVHGAD- 67
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV S+A+PQDNVE L A+ G+P+ R LA+L + N +AV+G+HGK+TT+S
Sbjct: 68 -----LVVYSTALPQDNVERLEAQEQGIPVLHRSQMLARLLNERNGVAVAGAHGKTTTSS 122
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A ++ G D T I+G + + G GK V EADE DG FL PS+ VVTN
Sbjct: 123 MIALAMELCGTDPTYIIGGEIMDMGTNAKA-GQGKCVVAEADESDGSFLQYYPSLGVVTN 181
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
++ +H++ + D + +K + +FL QI+ G V+CGD R LL +++ T
Sbjct: 182 IEADHLENYGGDFNRLKEAYVQFLNQIKPDGKAVVCGDDPNIRELLPRVQSPT------- 234
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESV-----CPNVQGGSDYILCERGRPLAQ 371
ITYG + D+ A + C + + + R L
Sbjct: 235 ------------------ITYGIETNCDYTAREIELGDRCVT------FKMYQGDRELGT 270
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG 431
+ L +PG HNV N++ ATV+ + E + L+ F G RRF ++G G
Sbjct: 271 VELSVPGRHNVYNAM---ATVIVCMEAGIPFDEVVKALR----HFHGAKRRFQVLGEKNG 323
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
I DD+AHHPTE++A + AA+ K +IAVFQP Y+R L D F+ A +AD+V+
Sbjct: 324 ILIIDDYAHHPTEIQATIAAAKA--TGKRIIAVFQPQRYTRTFFLLDAFSRAFGDADEVI 381
Query: 492 VSAVL--VFWLIIFAVSSFWLIMAINSVICIVRSMLPEKQ 529
++ + I VSS L+ I LP KQ
Sbjct: 382 ITDIYSPAGEKAIEGVSSSKLVELIKQNSNPGARYLPTKQ 421
>gi|313893638|ref|ZP_07827206.1| UDP-N-acetylmuramate--L-alanine ligase [Veillonella sp. oral taxon
158 str. F0412]
gi|313441782|gb|EFR60206.1| UDP-N-acetylmuramate--L-alanine ligase [Veillonella sp. oral taxon
158 str. F0412]
Length = 460
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 145/418 (34%), Positives = 234/418 (55%), Gaps = 40/418 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH +GIGGSG+ A+A + +++G++VSGSD+ S+ + E GA +HIGH+ + G D
Sbjct: 8 IHLIGIGGSGMRAIANILIQKGYDVSGSDVAESAVISKFREMGATVHIGHNKEYVNGVD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
AVV S+AI +DN EI+ AK G+ I R + + + + IAV+G+HGK++T S
Sbjct: 67 -----AVVRSTAIREDNPEIVAAKEQGITILHRSDIVKAVLDVTDGIAVAGAHGKTSTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+ +L D T I+G V + GS G G V+EADE DG FL L P V+TN
Sbjct: 122 MIGQILVEADADPTVIIGGEV-DYLKGSSCLGKGHFSVVEADESDGSFLKLRPHTIVITN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
++ +H+D ++ D + + F F++ + G ++CGD++ R +++++K++
Sbjct: 181 IEDDHMDHYKTMDNLLNAFCEFVETLPENGKAIVCGDNESIRYVMNRVKRN--------- 231
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
ITYG ND+ A+++ V Y + +G + ++ L++P
Sbjct: 232 ----------------FITYGLDDSNDYVAKNI-HYVDSTLVYDIYHKGINIERVRLRVP 274
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD 437
G HNVLNSLA G + + + L KF+G RRF+ G + G + DD
Sbjct: 275 GDHNVLNSLAAFIVAHDCCGVEAR------VITKGLGKFIGAKRRFETKGHVAGVWVVDD 328
Query: 438 FAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
+AHHPTE++A L+AA++ +I VFQPH ++R +LKD+FA A + AD+V ++ +
Sbjct: 329 YAHHPTEIKATLKAAKE-LEKHRVICVFQPHRFTRTSLLKDEFATAFTSADEVYMTDI 385
>gi|312794215|ref|YP_004027138.1| UDP-N-acetylmuramate/alanine ligase [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312181355|gb|ADQ41525.1| UDP-N-acetylmuramate/alanine ligase [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 455
Score = 251 bits (641), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 154/417 (36%), Positives = 240/417 (57%), Gaps = 41/417 (9%)
Query: 80 FVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSR 139
F+GIGG +SA+A + QGF V GSD+ S+ + L E G N++IGH S+I G++
Sbjct: 6 FIGIGGISMSAIALILKNQGFWVEGSDIQESATTKMLRENGINVYIGHDESHIHGDE--- 62
Query: 140 FPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKSTTASM 198
V+ ++AI +DN E++ AK + + IY+R +L L + + N+IA+SG+HGK+TT SM
Sbjct: 63 ---TVIYTAAISKDNPELIAAKRMNLKIYERAEFLGLLMKNFKNVIAISGTHGKTTTTSM 119
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
+ Y+LK + T +VGA V Q G+ G + V+EA EY FL +P++ V+ N+
Sbjct: 120 IGYILKKASYNPTILVGAFVKQLG-GNFVIGSKEYLVVEACEYVDSFLKFNPTIGVILNI 178
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVV 318
D +H+D F+D D++K+ F++F ++I G LV D + + ++ ++ +
Sbjct: 179 DNDHLDYFKDIDSIKNSFKKFAQKIPTSGFLVANCDDKNVKDVISKLHTQVVC-----IS 233
Query: 319 SNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPG 378
+ + +D++ G S ND Y E +V+ +D I LA I L IPG
Sbjct: 234 TKEKADIFA----------GNISCNDGYYEF---DVKNNNDEI-------LAHIKLNIPG 273
Query: 379 VHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDF 438
HNV NSLA A L ESI ++ LS+F G SRR + +G G ++YDD+
Sbjct: 274 FHNVYNSLAAFAVASKL------GVESIT-IEQALSEFCGASRRLEKVGEFDGIYLYDDY 326
Query: 439 AHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
AHHPTE++A L A ++ + A+FQPHT+SRL L ++FA +L AD+V+V+ V
Sbjct: 327 AHHPTEIKATL-ATLKKLSEGKVFAIFQPHTFSRLKSLLNEFAESLKWADKVIVTDV 382
>gi|238019066|ref|ZP_04599492.1| hypothetical protein VEIDISOL_00928 [Veillonella dispar ATCC 17748]
gi|237864321|gb|EEP65611.1| hypothetical protein VEIDISOL_00928 [Veillonella dispar ATCC 17748]
Length = 460
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 146/418 (34%), Positives = 233/418 (55%), Gaps = 40/418 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH +GIGGSG+ A+A + +++G++VSGSD+ S+ +E GA +HIGH+ + G D
Sbjct: 8 IHLIGIGGSGMRAIANILIQKGYDVSGSDVTESAVIEKFRNMGATVHIGHNKEYVNGVD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
AVV S+AI +DN EI+ AK G+ I R + + + + IAV+G+HGK++T S
Sbjct: 67 -----AVVRSTAIREDNPEIVAAKEQGITILHRSDIVKAVLDVTDGIAVAGAHGKTSTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+ +L D T I+G V + GS G G V+EADE DG FL L P V+TN
Sbjct: 122 MIGQILVEADADPTVIIGGEV-DYLKGSSCLGKGHFSVVEADESDGSFLKLRPHTIVITN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
++ +H+D ++ D + + F F++ + G ++CGD++ R ++ ++ ++
Sbjct: 181 IEDDHMDHYKTMDNLLNAFCEFVETLPESGKAIVCGDNENIRYIMSRVNRN--------- 231
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
ITYG S ND+ A+++ V Y + +G + +I L++P
Sbjct: 232 ----------------FITYGLSDNNDYVAKNI-HYVDSTLVYDVYHKGVNIERIRLRVP 274
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD 437
G HNVLNSLA G + + + L KF+G RRF+ G + G + DD
Sbjct: 275 GEHNVLNSLAAFIVAHDCCGVETR------IITKGLGKFIGAKRRFETKGHVAGVWVVDD 328
Query: 438 FAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
+AHHPTE++A L+AA++ +I VFQPH ++R +LKD+FA A + AD+V ++ +
Sbjct: 329 YAHHPTEIKATLKAAKE-LEKHRVICVFQPHRFTRTSLLKDEFATAFTNADEVYMTDI 385
>gi|294793905|ref|ZP_06759042.1| UDP-N-acetylmuramate--alanine ligase [Veillonella sp. 3_1_44]
gi|294455475|gb|EFG23847.1| UDP-N-acetylmuramate--alanine ligase [Veillonella sp. 3_1_44]
Length = 460
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 145/418 (34%), Positives = 232/418 (55%), Gaps = 40/418 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH +GIGGSG+ A+A + +++G++VSGSD+ S+ + + GA +HIGH+ + G D
Sbjct: 8 IHLIGIGGSGMRAIANILIQKGYDVSGSDIAESAVISKFRDMGATVHIGHNKEYVNGVD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
A+V S+AI +DN EI+ AK G+ I R + + + + IAV+G+HGK++T S
Sbjct: 67 -----AIVRSTAIREDNPEIVAAKEQGITILHRSDIVKAVLDVTDGIAVAGAHGKTSTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+ +L D T I+G V + GS G G V+EADE DG FL L P V+TN
Sbjct: 122 MIGQILVEANADPTVIIGGEV-DYLKGSSCLGKGHFSVVEADESDGSFLKLHPHTIVITN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
++ +H+D ++ D + + F F++ + G ++CGD++ R ++ ++K+
Sbjct: 181 IEDDHMDHYKTMDNLLNAFCEFVETLPEAGKAIVCGDNENIRYVMSRVKR---------- 230
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
ITYG ND+ A+++ V Y + +G + +ISL +P
Sbjct: 231 ---------------TFITYGLEDNNDYVAKNI-HYVDSSLVYDVYHKGINIGRISLCVP 274
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD 437
G HNVLNSLA G + + + L KF+G RRF+ G + G + DD
Sbjct: 275 GEHNVLNSLAAFIVAHECCGVENR------FITKALGKFIGAKRRFETKGHVAGVWVVDD 328
Query: 438 FAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
+AHHPTE++A L+AA++ +I VFQPH Y+R +LKD+FA A + AD++ ++ +
Sbjct: 329 YAHHPTEIKATLRAAKE-LEKHRVICVFQPHRYTRTSLLKDEFATAFTSADEIYMTDI 385
>gi|421074494|ref|ZP_15535525.1| UDP-N-acetylmuramate--L-alanine ligase [Pelosinus fermentans JBW45]
gi|392527365|gb|EIW50460.1| UDP-N-acetylmuramate--L-alanine ligase [Pelosinus fermentans JBW45]
Length = 459
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 155/420 (36%), Positives = 235/420 (55%), Gaps = 44/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+SA+AK+ L+ G+ VSGSDL S L + GA++++GH+ N+Q +
Sbjct: 8 IHFVGIGGAGMSAIAKVLLQMGYIVSGSDLTKSETTAKLEKIGAHIYLGHNEENLQDS-- 65
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
A+V S+AIP+ N E+ A+ +P++ R +A L +Y IAV+G+HGK+TT S
Sbjct: 66 ----QAIVISTAIPETNPEVKLARKKQIPVFHRADIVAYLMLQYKGIAVAGAHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A +L+ G D T I+G V + +G+ G G+ V EADE DG FL SP +AVVTN
Sbjct: 122 MIAVMLEHAGVDPTVIIGGEV-DYLNGNAKLGSGQYLVAEADESDGSFLKFSPHIAVVTN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVG-GHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
++ +H+D ++ + V F++FL ++ G ++C D++ R+L++++
Sbjct: 181 IENDHMDFYKTMENVLDTFKKFLHKLPPSIGLGIVCFDNENIRNLVNEV----------- 229
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG-SDYILCERGRPLAQISLQ 375
D I+YG + A ++ + QG + Y + + L I +
Sbjct: 230 --------------DRPYISYGIDHTAQYMARNL--STQGATTTYDVYHNEQLLGSIKIN 273
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
+PG HNV NSLA + L IG Q + L+ F G RRF I G I
Sbjct: 274 VPGRHNVGNSLAAVIVGLN-IGLTFQE------IAEGLAHFQGAKRRFQTKAKINGVWII 326
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHPTE+ L AARQ PN+ LI VFQPH YSR L+++F +A +D +V++ V
Sbjct: 327 DDYAHHPTEIATTLLAARQTEPNR-LICVFQPHRYSRTAFLRNEFGSAFQSSDILVLTDV 385
>gi|392960456|ref|ZP_10325924.1| UDP-N-acetylmuramate--L-alanine ligase [Pelosinus fermentans DSM
17108]
gi|421054788|ref|ZP_15517753.1| UDP-N-acetylmuramate/alanine ligase [Pelosinus fermentans B4]
gi|421060402|ref|ZP_15522882.1| UDP-N-acetylmuramate--L-alanine ligase [Pelosinus fermentans B3]
gi|421064374|ref|ZP_15526256.1| UDP-N-acetylmuramate--L-alanine ligase [Pelosinus fermentans A12]
gi|421071650|ref|ZP_15532766.1| UDP-N-acetylmuramate--L-alanine ligase [Pelosinus fermentans A11]
gi|392440469|gb|EIW18149.1| UDP-N-acetylmuramate/alanine ligase [Pelosinus fermentans B4]
gi|392446915|gb|EIW24186.1| UDP-N-acetylmuramate--L-alanine ligase [Pelosinus fermentans A11]
gi|392455033|gb|EIW31840.1| UDP-N-acetylmuramate--L-alanine ligase [Pelosinus fermentans DSM
17108]
gi|392457162|gb|EIW33869.1| UDP-N-acetylmuramate--L-alanine ligase [Pelosinus fermentans B3]
gi|392461231|gb|EIW37450.1| UDP-N-acetylmuramate--L-alanine ligase [Pelosinus fermentans A12]
Length = 459
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 155/420 (36%), Positives = 235/420 (55%), Gaps = 44/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+SA+AK+ L+ G+ VSGSDL S L + GA++++GH+ N+Q +
Sbjct: 8 IHFVGIGGAGMSAIAKVLLQMGYIVSGSDLTKSETTAKLEKIGAHIYLGHNEENLQDS-- 65
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
A+V S+AIP+ N E+ A+ +P++ R +A L +Y IAV+G+HGK+TT S
Sbjct: 66 ----QAIVISTAIPETNPEVKLARKKQIPVFHRADIVAYLMLQYKGIAVAGAHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A +L+ G D T I+G V + +G+ G G+ V EADE DG FL SP +AVVTN
Sbjct: 122 MIAVMLEHAGVDPTVIIGGEV-DYLNGNAKLGSGQYLVAEADESDGSFLKFSPHIAVVTN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVG-GHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
++ +H+D ++ + V F++FL ++ G ++C D++ R+L++++
Sbjct: 181 IENDHMDFYKTMENVLDTFKKFLHKLPPNIGLGIVCFDNENIRNLVNEV----------- 229
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG-SDYILCERGRPLAQISLQ 375
D I+YG + A ++ + QG + Y + + L I +
Sbjct: 230 --------------DRPYISYGIDHTAQYMARNL--STQGATTTYDVYHNEQLLGSIKIN 273
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
+PG HNV NSLA + L IG Q + L+ F G RRF I G I
Sbjct: 274 VPGRHNVGNSLAAVIVGLN-IGLTFQE------IAEGLAHFQGAKRRFQTKARINGVWII 326
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHPTE+ L AARQ PN+ LI VFQPH YSR L+++F +A +D +V++ V
Sbjct: 327 DDYAHHPTEIATTLLAARQTEPNR-LICVFQPHRYSRTAFLRNEFGSAFQSSDILVLTDV 385
>gi|317154475|ref|YP_004122523.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfovibrio aespoeensis
Aspo-2]
gi|316944726|gb|ADU63777.1| UDP-N-acetylmuramate/alanine ligase [Desulfovibrio aespoeensis
Aspo-2]
Length = 480
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 145/430 (33%), Positives = 226/430 (52%), Gaps = 41/430 (9%)
Query: 66 ECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHI 125
E + R IH VGIGGSG++ +A++ + GF V+GSDL S+ + L + GA + I
Sbjct: 14 EACPAMRARVNKIHMVGIGGSGMNGIAEVLINMGFSVTGSDLSASAAVRRLEKLGATVFI 73
Query: 126 GHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIA 185
GH +N+ D ++ S+AIP N E++ A+ G+PI R LA+L +A
Sbjct: 74 GHGAANLGEAD------VLIKSTAIPDKNPELVAARGRGIPIIPRAEMLAELMRLRTGVA 127
Query: 186 VSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCF 245
++G+HGK+TT S+LA + G D T I+G + + + GGG + EADE DG F
Sbjct: 128 IAGTHGKTTTTSLLATIFTEAGLDPTVIIGGKLNTY-GANARLGGGDYLIAEADESDGSF 186
Query: 246 LGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 305
L LSP ++VVTN+D +H+D + D+DA+ F RF+ I G V+CGD + + LL I
Sbjct: 187 LLLSPIISVVTNVDKDHMDFYADQDAIDDAFTRFMNSIPFYGMNVVCGDDEGVQRLLPTI 246
Query: 306 KQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER 365
K+ +TYG N E + +++ S + +
Sbjct: 247 KR-------------------------PCLTYGLGPKNRLRGEIITSHLR--SLFRVFLD 279
Query: 366 GRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
G+P ++++ PG+HNV N+LA I L DK +A F GV RRF+
Sbjct: 280 GQPWGEVTVAQPGIHNVQNALACIGVALEAGLDKEDIVNGLA-------NFGGVGRRFER 332
Query: 426 IGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
G G + DD+ HHP E+ A L+ AR +P++ L+ FQPH ++R L +F A +
Sbjct: 333 KGERKGVLVVDDYGHHPAEIIANLRTARACYPDRRLVVAFQPHRFTRTQALFGEFCKAFT 392
Query: 486 EADQVVVSAV 495
+AD ++++ +
Sbjct: 393 DADLLLLTEI 402
>gi|402815480|ref|ZP_10865072.1| UDP-N-acetylmuramate--L-alanine ligase MurC [Paenibacillus alvei
DSM 29]
gi|402506520|gb|EJW17043.1| UDP-N-acetylmuramate--L-alanine ligase MurC [Paenibacillus alvei
DSM 29]
Length = 476
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 154/446 (34%), Positives = 238/446 (53%), Gaps = 51/446 (11%)
Query: 55 VLTNC---TFKRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSS 111
VL+ C KR E ++ N IHF+GIGG G+SA+A++ L+ G+ V+GSD+
Sbjct: 5 VLSFCIGPNLKRVGEFVL---NTTEHIHFIGIGGYGMSAIARVMLEMGYTVTGSDVAEQD 61
Query: 112 YMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRD 171
E L + GA +HIGH + +Q D VV S+A P+DNVE + A+ G+P+ R
Sbjct: 62 LTEKLRKKGATVHIGHDPAYVQNAD------TVVYSTACPKDNVERVAAEQQGIPVIHRS 115
Query: 172 YWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGG 231
LA+L IAV+G+HGK+TT+SM+A+V++ G D T I+G V G+ G
Sbjct: 116 QMLARLLNAKKGIAVAGAHGKTTTSSMIAFVMERCGVDPTYIIGGEVTNL--GTNAQAGN 173
Query: 232 KNFVL-EADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHL 289
+V+ EADE DG FL P +AVV N++ +H++ + D + +K + +FL Q+ G
Sbjct: 174 SEYVVAEADESDGSFLNYHPHIAVVLNIEADHLENYGGDFERLKEAYVQFLSQVSADGCS 233
Query: 290 VICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAES 349
V+C D ++L + G G ++TYG D+ A
Sbjct: 234 VLCADDPIVGAMLPSL---------------------GAG----VVTYGIEQAADYTATE 268
Query: 350 VCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACL 409
+ +G + + + +G+ L + L IPG HNVLN++A I + Q+ +I
Sbjct: 269 IIAEDRGMT-FTMNHQGKALGSVQLSIPGTHNVLNAMATIIVAMRTGIPFEQAAAAIV-- 325
Query: 410 KLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHT 469
F+G RRF +IG G + DD+AHHPTE+ A L AA+ N+ ++AVFQP
Sbjct: 326 -----DFIGAKRRFQVIGEEQGVLVVDDYAHHPTEIEATLSAAKA--TNRRIVAVFQPQR 378
Query: 470 YSRLVVLKDDFANALSEADQVVVSAV 495
YSR L D F+ A + AD+++++ +
Sbjct: 379 YSRTYFLFDQFSRAFAGADELILTDI 404
>gi|334135153|ref|ZP_08508650.1| UDP-N-acetylmuramate--L-alanine ligase [Paenibacillus sp. HGF7]
gi|333607291|gb|EGL18608.1| UDP-N-acetylmuramate--L-alanine ligase [Paenibacillus sp. HGF7]
Length = 461
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 147/428 (34%), Positives = 234/428 (54%), Gaps = 51/428 (11%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
N +HF+GIGG G+SA+AK+ L+ G++VSGSDL E L GA ++IGH N+
Sbjct: 2 NTPEHVHFIGIGGYGMSAIAKVMLEMGYQVSGSDLAQQELTEKLRAKGARVYIGHEAQNV 61
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
G D VV S+A+ +DNVE++ A +P+ R LA+L + IAV+G+HGK
Sbjct: 62 NGAD------LVVYSTALSKDNVEMVAAGEQNIPVIHRSQMLARLMNERKGIAVAGAHGK 115
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPS 251
+TT+SM+A V++ G D T I+G + GS G ++V+ EADE DG FL P+
Sbjct: 116 TTTSSMIALVMERCGTDPTYIIGGEIMNI--GSNAKAGKGDYVVAEADESDGTFLQYHPT 173
Query: 252 VAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
+A+V N++ +H++ ++ D + +K + +FL Q+R G +IC D + R +L QIK +T
Sbjct: 174 LALVNNIEADHLENYDGDFENLKKAYAQFLSQVREDGKAIICLDDEYLRGMLPQIKSET- 232
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYI---LCERGR 367
+TY D A+ V +++ G + + G
Sbjct: 233 ------------------------LTYAI----DRDADYVATDIELGDRKVSFSVRRGGE 264
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
L ++ L +PG HNV N++A + T L ++ + + + +F G RRF ++G
Sbjct: 265 TLGKVRLSVPGRHNVYNAMATLITCL-------EAGLTFDQIAEAIEEFRGAKRRFQVLG 317
Query: 428 TIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ + DD+AHHPTE+ A + AA+ K LIAVFQP Y+R L + F++A EA
Sbjct: 318 EVNDILVIDDYAHHPTEIEATISAAKA--TGKHLIAVFQPQRYTRTFYLFEQFSHAFKEA 375
Query: 488 DQVVVSAV 495
D+V+++ +
Sbjct: 376 DEVLITDI 383
>gi|317121120|ref|YP_004101123.1| UDP-N-acetylmuramate--L-alanine ligase [Thermaerobacter marianensis
DSM 12885]
gi|315591100|gb|ADU50396.1| UDP-N-acetylmuramate--L-alanine ligase [Thermaerobacter marianensis
DSM 12885]
Length = 479
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 162/421 (38%), Positives = 232/421 (55%), Gaps = 38/421 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG G+S LA++ L +G VSGSD+ S L E GA +HIGH+ ++ G D
Sbjct: 17 VHFIGIGGYGMSGLARVLLARGARVSGSDVRPSDRTRWLAEQGAAVHIGHAARHVAGAD- 75
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV ++ +P DNVE++ A+ G+P++ R LA L +AV+G+HGK+TT +
Sbjct: 76 -----LVVYNTDVPADNVELVAAREAGIPVWHRSQVLADLLNHRRSVAVTGTHGKTTTTA 130
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M VL A G D T +VG VP+F + G G V EA E DG FL P +AVVTN
Sbjct: 131 MTGLVLVAGGLDPTVLVGGEVPEFGAATARLGEGPWVVAEACESDGTFLRYLPEIAVVTN 190
Query: 258 LDWEHVDIFEDEDA-VKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
++ EH+D + + A + F RFL+ +R GG +V CGD R LL G+
Sbjct: 191 VEPEHLDHYGGDFAQLLQAFARFLRNVRPGGLVVACGDHPVLRQLLADRTPAPGV----- 245
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFN-DWYAESVCPNVQGGSDYILCERGRPLAQISLQ 375
+++ YG + + D A V + G+ + + + GRPL ++ L
Sbjct: 246 ----------------RVVRYGMEAEDSDLRARDVQAGPE-GTRFTVWQGGRPLGEVRLA 288
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
+PG+HNVLN+LA +A L L A L+ F G RRF +I G +
Sbjct: 289 VPGLHNVLNALAAVAVGLEL-------RVPFAAAAAALASFHGAKRRFQVIYNRDGILVV 341
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKA-LIAVFQPHTYSRLVVLKDDFANALSEADQVVVSA 494
DD+AHHPTE+RA L+AARQR +IAVFQP YSR +L D+FA A +AD+V+++
Sbjct: 342 DDYAHHPTEIRATLRAARQRQGEGGRVIAVFQPQRYSRTRLLMDEFARAFGDADRVILTE 401
Query: 495 V 495
+
Sbjct: 402 I 402
>gi|312621430|ref|YP_004023043.1| UDP-N-acetylmuramate/alanine ligase [Caldicellulosiruptor
kronotskyensis 2002]
gi|312201897|gb|ADQ45224.1| UDP-N-acetylmuramate/alanine ligase [Caldicellulosiruptor
kronotskyensis 2002]
Length = 455
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 151/418 (36%), Positives = 234/418 (55%), Gaps = 43/418 (10%)
Query: 80 FVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSR 139
F+GIGG +SA+A + QGF V GSD+ S+ + L E G N++IGH S+I G++
Sbjct: 6 FIGIGGISMSAIALILKNQGFCVEGSDIQESATTKMLRENGINVYIGHDESHIHGDE--- 62
Query: 140 FPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKSTTASM 198
V+ ++AI +DN E+L AK + + IY+R +L L + N+IA++G+HGK+TT SM
Sbjct: 63 ---TVIYTAAISKDNPELLAAKRMNLKIYERAEFLGLLMRNFKNVIAIAGTHGKTTTTSM 119
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNF-VLEADEYDGCFLGLSPSVAVVTN 257
+ Y+LK + T +VGA V Q G F G K++ V+EA EY FL P++ V+ N
Sbjct: 120 IGYILKKANYNPTILVGAFVKQL--GGNFVIGSKDYLVVEACEYVDSFLKFKPTIGVILN 177
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D +H+D F+D D++K FR+F +I G +V D + + ++ ++ +
Sbjct: 178 IDNDHLDYFKDIDSIKESFRKFAMKIPSSGFIVANCDDKNVKDVISKLHTQVVC-----I 232
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
+ + +D++ S+ND Y E N + LA I L IP
Sbjct: 233 STKEKADIFADN----------ISYNDGYYEFDVKN----------KNNEILAHIKLNIP 272
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD 437
G HNV N+LA A L ES ++ LS+F G SRR + +G G ++YDD
Sbjct: 273 GFHNVYNALAAFAVASKL------RIESFT-IEQTLSEFCGASRRLEKVGEFNGIYLYDD 325
Query: 438 FAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
+AHHPTE++A L A ++ ++A+FQPHT+SRL L ++FA +L AD+V+V+ V
Sbjct: 326 YAHHPTEIKATL-ATLKKISEGKVLAIFQPHTFSRLKTLLNEFAESLKLADKVIVTDV 382
>gi|451949059|ref|YP_007469654.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfocapsa sulfexigens
DSM 10523]
gi|451908407|gb|AGF80001.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfocapsa sulfexigens
DSM 10523]
Length = 462
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 154/424 (36%), Positives = 227/424 (53%), Gaps = 41/424 (9%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
N+ IHFVG+GG G+S +A+L L G+EVSGSDL S L G +H GH +
Sbjct: 3 NKTKKIHFVGVGGIGMSGIAELLLNLGYEVSGSDLNDSVTTRNLESIGGTIHKGHDGRWV 62
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE-KYNLIAVSGSHG 191
+G D VV SSAI +DN E++ A + +P+ +R LA+L K IA++GSHG
Sbjct: 63 KGAD------VVVTSSAITKDNPEVVTALAAEIPVIQRAEMLAELMRLKKFGIAIAGSHG 116
Query: 192 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPS 251
K++T SM+++++ D T +VG V G+ G G+ V EADE DG FL LSP
Sbjct: 117 KTSTTSMVSWMMHVANLDPTIVVGGKVDSL-GGNAKLGQGEFLVAEADESDGSFLKLSPV 175
Query: 252 VAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
+ VVTN+D EH+D ++D D +K+ F F+ +I G +++C D +L +IK+
Sbjct: 176 LEVVTNIDLEHMDHYKDIDHIKATFLEFIDRIPFYGAVIVCLDDANIADILPRIKK---- 231
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQ 371
+ ITYG ++ D A+ + P G + + +G L
Sbjct: 232 ---------------------RKITYGLTAQADLMADHIEPG-NGRVKFAVRHKGESLGS 269
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG 431
I L + G HNV N+LA I L L E+I+ L+ F GV RR L G G
Sbjct: 270 IDLSLAGRHNVYNALAAICVGLELA----IPFETISK---ALATFQGVQRRMQLKGKGRG 322
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+ HHPTE+RA L A ++ +P K L+ +FQPH YSR + L ++F +AD +V
Sbjct: 323 ITVIDDYGHHPTEIRATLAAIKEGWPEKRLVVLFQPHRYSRTLALLEEFRTCFHQADYLV 382
Query: 492 VSAV 495
++ +
Sbjct: 383 MTEI 386
>gi|256830370|ref|YP_003159098.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfomicrobium baculatum
DSM 4028]
gi|256579546|gb|ACU90682.1| UDP-N-acetylmuramate/alanine ligase [Desulfomicrobium baculatum DSM
4028]
Length = 458
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 145/425 (34%), Positives = 227/425 (53%), Gaps = 41/425 (9%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K++ IH VGIGG+G+S +A++ L G+EVSGSDLV L GA +H GH
Sbjct: 1 MKSKIKKIHMVGIGGAGMSGIAEVLLTLGYEVSGSDLVKGPVALRLETLGATVHAGHERK 60
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N+QG VV S+A+ +DN E+ A++ GVPI R LA+L +AV+G+H
Sbjct: 61 NVQG------AQVVVRSTAVSEDNPELEEARAHGVPIIPRAEMLAELMRLKVGVAVAGTH 114
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S+LA + D T I+G + + ++ G G+ + EADE DG FL L P
Sbjct: 115 GKTTTTSLLATIFMEAHLDPTVIIGGRLNAYGSNAML-GQGRYLIAEADESDGSFLCLLP 173
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
+++VTN+D +H+D ++D D ++ F F+ + G V+CGD + +S+L ++++
Sbjct: 174 RISIVTNVDADHLDYYKDLDEIRDSFVDFMNSVPFYGLNVVCGDDKGVQSILSRVRR--- 230
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
++TYGF ND AE + + + GS + + +
Sbjct: 231 ----------------------PVMTYGFGEENDLRAEII--SCEAGSRFNVYRQSEFWG 266
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+++L PG HNVLN+LA I + K+ + L F GV RRF+ G
Sbjct: 267 EVTLTHPGRHNVLNALAAIGVAMEAGVPKKD-------IIHGLGAFAGVGRRFEHKGERN 319
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
G + DD+ HHPTE+ A L+ AR +P+K L+ FQPH ++R L DF+ + DQ+
Sbjct: 320 GVLVVDDYGHHPTEIAATLETARLCYPHKRLVVAFQPHRFTRTQALFGDFSKVFAGVDQL 379
Query: 491 VVSAV 495
+++ +
Sbjct: 380 LLTEI 384
>gi|430750751|ref|YP_007213659.1| UDP-N-acetylmuramate--L-alanine ligase [Thermobacillus composti
KWC4]
gi|430734716|gb|AGA58661.1| UDP-N-acetylmuramate--alanine ligase [Thermobacillus composti KWC4]
Length = 465
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 151/422 (35%), Positives = 235/422 (55%), Gaps = 46/422 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG G+SA+A++ L++G++VSGSD+V + L GA ++IGH +++G
Sbjct: 7 VHFIGIGGYGMSAIARVMLEKGYKVSGSDVVRQERTDKLAAQGARIYIGHKPEHVRG--- 63
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
N VV S+AI QD+VE A+ +P+ R LA+L + +AV+G+HGK+TT+S
Sbjct: 64 ---ANLVVYSTAIAQDDVERKAAEERNIPVIHRSQMLARLLNEGKGVAVAGAHGKTTTSS 120
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A V+++ G D T I+G + D + GGG+ V EADE DG FL P AVVTN
Sbjct: 121 MIALVMESCGLDPTYIIGGEIVGL-DTNAKAGGGEYVVAEADESDGSFLQYQPHTAVVTN 179
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
++ +H++ ++ D +K + +FL+Q++ G V+C D R LL ++
Sbjct: 180 IEPDHLENYDGDFGKLKEAYVQFLRQVKPEGMAVVCADDPNIRELLPRLD---------- 229
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFN--DWYAESVCPNVQGGSDYILCERGRPLAQISL 374
+I+TY D+ A + P + S + + RG L ++ L
Sbjct: 230 --------------GARIVTYSIEPGREADYRAMDITPGDRKVS-FTVIRRGERLGRVDL 274
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIA-CLKLPLSKFMGVSRRFDLIGTIYGCH 433
+PG HN N+LA IA L + S E +A ++L F G RRF +IG G
Sbjct: 275 SVPGRHNAGNALAAIAVCL----EAGLSFERVAEAIRL----FRGAKRRFQVIGETGGIL 326
Query: 434 IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVS 493
+ DD+AHHPTE++A + AA+ K +IAVFQP Y+R L D F+ + +EAD+VV++
Sbjct: 327 LIDDYAHHPTEIQATIAAAKA--TGKRIIAVFQPQRYTRTFFLLDAFSRSFAEADEVVIT 384
Query: 494 AV 495
+
Sbjct: 385 DI 386
>gi|312126685|ref|YP_003991559.1| udp-n-acetylmuramate/alanine ligase [Caldicellulosiruptor
hydrothermalis 108]
gi|311776704|gb|ADQ06190.1| UDP-N-acetylmuramate/alanine ligase [Caldicellulosiruptor
hydrothermalis 108]
Length = 455
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 151/418 (36%), Positives = 235/418 (56%), Gaps = 43/418 (10%)
Query: 80 FVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSR 139
F+GIGG +SA+A + QGF V GSD+ S+ + L E G N++IGH S+I G++
Sbjct: 6 FIGIGGISMSAIALILKNQGFCVEGSDIQESATTKMLRENGINVYIGHDESHIHGDE--- 62
Query: 140 FPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKSTTASM 198
V+ ++AI +DN E+L AK + + IY+R +L L + N+IA++G+HGK+TT SM
Sbjct: 63 ---TVIYTAAISKDNPELLAAKRMNLKIYERAEFLGLLMRNFKNVIAIAGTHGKTTTTSM 119
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNF-VLEADEYDGCFLGLSPSVAVVTN 257
+ Y+LK + T +VGA V Q G F G K++ V+EA EY FL +P++ V+ N
Sbjct: 120 IGYILKKANYNPTILVGAFVKQL--GGNFVIGSKDYLVVEACEYVDSFLKFNPTIGVILN 177
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D +H+D F+D D++K+ F++F ++I G LV D + + ++ + +
Sbjct: 178 IDNDHLDYFKDIDSIKNSFKKFAQKIPTSGFLVANCDDKNVKDIISKFHTQVVC-----I 232
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
+ + +D++ S ND Y E N LA I L IP
Sbjct: 233 STKEKADIFADN----------ISCNDGYYEFDVKN----------NNNEILAHIKLNIP 272
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD 437
G HNV N+LA A L ES+ ++ LS+F G SRR + +G G ++YDD
Sbjct: 273 GFHNVYNALAAFAVASKL------RVESLT-IEQALSEFCGASRRLEKVGEFNGIYLYDD 325
Query: 438 FAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
+AHHPTE++A L A ++ ++A+FQPHT+SRL L ++FA +L AD+V+V+ V
Sbjct: 326 YAHHPTEIKATL-ATLKKISEGKVLAIFQPHTFSRLKTLLNEFAESLKLADKVIVTDV 382
>gi|289522905|ref|ZP_06439759.1| UDP-N-acetylmuramate--alanine ligase [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289503929|gb|EFD25093.1| UDP-N-acetylmuramate--alanine ligase [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 485
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 154/419 (36%), Positives = 226/419 (53%), Gaps = 37/419 (8%)
Query: 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGND 136
++H +G+GG+G+S LA L + G+EVSG D+ ++Y+ L + G + GH S+I D
Sbjct: 19 YLHLMGVGGAGMSGLAHLLKEMGYEVSGCDVTRTNYVYNLEKLGVKVLCGHGASHI---D 75
Query: 137 GSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
R P+ +V SSAI DN E+++A+ GV + +R L+ + + I V+G+HGK+TT+
Sbjct: 76 IFR-PDMLVYSSAIAWDNDELVYARKAGVNVARRGDILSSIFNRLKGIGVAGAHGKTTTS 134
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM+A VL A G D T +G V G+ G G V E DE DG F S + VVT
Sbjct: 135 SMIATVLDAAGLDPTIAIGGEVSDIG-GNARLGHGDYMVSELDESDGSFELFSCYIPVVT 193
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N+DW+HV+ + +V+ F RFL + + G ++ICG +DTG + G
Sbjct: 194 NIDWDHVNFYPTFQSVQDAFVRFLSKRKDDGKIIICG-------------EDTGCQSVAG 240
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+ Q ITYG+ DW A V +V GG + + +RG + +I+L++
Sbjct: 241 KFAPQC------------ITYGWGMQWDWGAVGVNHSVGGGVSFTVVKRGAEIGEINLRV 288
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
G HNVLN+LA A V L+G S ++ L KF G RR +G + YD
Sbjct: 289 SGEHNVLNALAACA-VCDLLG------ISFNTIRHALHKFKGTKRRLQCLGVCDDIYFYD 341
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+ HHP EV+A L R FP++ L+ +FQPH YSR + FA AL +AD V + V
Sbjct: 342 DYGHHPREVQATLDTLRNIFPSRRLVVIFQPHRYSRTKAMYRKFAEALMKADLVYILPV 400
>gi|374603457|ref|ZP_09676436.1| UDP-N-acetylmuramate/alanine ligase [Paenibacillus dendritiformis
C454]
gi|374390928|gb|EHQ62271.1| UDP-N-acetylmuramate/alanine ligase [Paenibacillus dendritiformis
C454]
Length = 458
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 148/419 (35%), Positives = 228/419 (54%), Gaps = 43/419 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG G+SA+A++ L+ G+ VSGSD+ S L GA +HIGH ++ D
Sbjct: 7 IHFIGIGGYGMSAIARVMLQMGYTVSGSDVAASEATAKLQAQGATVHIGHDAGYVEDAD- 65
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
V S+A P DNVE + A+ G+P+ R LAKL +AV+G+HGK+TT+S
Sbjct: 66 -----IAVYSTACPVDNVERIAAERRGIPVLHRSQMLAKLLNAKKGVAVAGAHGKTTTSS 120
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A+VL+ G D T I+G V + G G+ V EADE DG FL P + V+TN
Sbjct: 121 MIAFVLERCGADPTYIIGGEVTNLGTNA-RAGSGEFVVAEADESDGSFLAYHPYIPVITN 179
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
++ +H++ ++ D + +K+ + +FL Q G V+C D RS+ ++
Sbjct: 180 IEADHLENYDGDFERLKAAYVQFLSQRSPDGIAVLCADDPILRSMAPRL----------- 228
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
GQG ++TYG D+ A+ V +G + + + RG L + L I
Sbjct: 229 ----------GQG----VVTYGIDEAADYTADDVQAEGRGMT-FRMRHRGETLGSVRLSI 273
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG +NVLN++A + + Q+ S +++F+G RRF ++G G + D
Sbjct: 274 PGRYNVLNAMAALIVAM-------QAGVSFERAAGAITEFIGAKRRFQVVGEEGGILVVD 326
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHPTE+ A L AA+ + L+AVFQP YSR L + F+ A +EAD+++V+ +
Sbjct: 327 DYAHHPTEIEATLTAAKA--TGRRLVAVFQPQRYSRTYFLFEQFSRAFTEADELIVTDI 383
>gi|15896472|ref|NP_349821.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium acetobutylicum
ATCC 824]
gi|337738431|ref|YP_004637878.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium acetobutylicum
DSM 1731]
gi|25008805|sp|Q97E89.1|MURC_CLOAB RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|15026298|gb|AAK81161.1|AE007818_7 UDP-N-acetylmuramate-alanine ligase [Clostridium acetobutylicum
ATCC 824]
gi|336292957|gb|AEI34091.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium acetobutylicum
DSM 1731]
Length = 458
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 151/430 (35%), Positives = 244/430 (56%), Gaps = 47/430 (10%)
Query: 70 DFKNR-KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
D KN IHF+GIGG +S LA++ L++GF+VSGSD+ S ++ L E GA +++GH+
Sbjct: 4 DLKNDISKKIHFIGIGGVSMSGLAEILLERGFKVSGSDMNGSPMIDKLKEHGAEIYLGHN 63
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAV 186
NI D VV ++AIP+DN E+++A+ + + R +L L + KYN IA+
Sbjct: 64 EKNINNVD------IVVYTAAIPEDNPELIYARKNNISLMTRAEFLGSLMKGHKYN-IAI 116
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
SG+HGK+TT SM++++ D T +VG ++ +G++ G F+ EA EY FL
Sbjct: 117 SGTHGKTTTTSMVSHIALTEDVDPTILVGGNL-DIINGNVLAGKSDYFITEACEYKASFL 175
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVI-CGDSQCARSLLDQI 305
P + V+ N+D +H+D +++ D +++ F +F+ I G+L+ D + AR
Sbjct: 176 EFYPYIGVILNIDADHLDYYKNIDDIENTFAKFVNLIPKEGYLIANADDKRVAR------ 229
Query: 306 KQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER 365
V SN + + ++++G + D A+++ N G S + + +
Sbjct: 230 -----------VASNATCN---------VVSFGIDN-GDIRAKNISFNESGFSSFDVYKS 268
Query: 366 GRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
L I L +PG HN+LN+L+ IA+ LTL + SH+SI L F G RRF++
Sbjct: 269 SELLFNIELNVPGKHNILNALSAIASALTL----KISHKSIID---GLKSFKGTHRRFEI 321
Query: 426 IGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
G G + DD+AHHPTE++A L AA+ +P+ + VFQPHTYSR + L DDF+N+ S
Sbjct: 322 KGVKNGITVIDDYAHHPTEIKATLDAAKN-YPHNKIYCVFQPHTYSRTLSLFDDFSNSFS 380
Query: 486 EADQVVVSAV 495
D++V++ +
Sbjct: 381 GVDELVLADI 390
>gi|384459941|ref|YP_005672361.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium acetobutylicum
EA 2018]
gi|325510630|gb|ADZ22266.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium acetobutylicum
EA 2018]
Length = 458
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 151/430 (35%), Positives = 244/430 (56%), Gaps = 47/430 (10%)
Query: 70 DFKNR-KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
D KN IHF+GIGG +S LA++ L++GF+VSGSD+ S ++ L E GA +++GH+
Sbjct: 4 DLKNDISKKIHFIGIGGVSMSGLAEILLERGFKVSGSDMNGSPMIDKLKEHGAEIYLGHN 63
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAV 186
NI D VV ++AIP+DN E+++A+ + + R +L L + KYN IA+
Sbjct: 64 EKNINNVD------IVVYTAAIPEDNPELIYARKNNISLMTRAEFLGSLMKGHKYN-IAI 116
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
SG+HGK+TT SM++++ D T +VG ++ +G++ G F+ EA EY FL
Sbjct: 117 SGTHGKTTTTSMVSHIALTEDVDPTILVGGNL-DIINGNVLAGKSDYFITEACEYKASFL 175
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVI-CGDSQCARSLLDQI 305
P + V+ N+D +H+D +++ D +++ F +F+ I G+L+ D + AR
Sbjct: 176 EFYPYIGVILNIDADHLDYYKNIDDIENTFAKFVNLIPKEGYLIANADDKRVAR------ 229
Query: 306 KQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER 365
V SN + + ++++G + D A+++ N G S + + +
Sbjct: 230 -----------VASNATCN---------VVSFGIDN-GDIRAKNISFNESGFSSFDVYKS 268
Query: 366 GRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
L I L +PG HN+LN+L+ IA+ LTL + SH+SI L F G RRF++
Sbjct: 269 SELLFNIKLNVPGKHNILNALSAIASALTL----KISHKSIID---GLKSFKGTHRRFEI 321
Query: 426 IGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
G G + DD+AHHPTE++A L AA+ +P+ + VFQPHTYSR + L DDF+N+ S
Sbjct: 322 KGVKNGITVIDDYAHHPTEIKATLDAAKN-YPHNKIYCVFQPHTYSRTLSLFDDFSNSFS 380
Query: 486 EADQVVVSAV 495
D++V++ +
Sbjct: 381 GVDELVLADI 390
>gi|452852303|ref|YP_007493987.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfovibrio piezophilus]
gi|451895957|emb|CCH48836.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfovibrio piezophilus]
Length = 486
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 145/430 (33%), Positives = 223/430 (51%), Gaps = 41/430 (9%)
Query: 66 ECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHI 125
E + R IH VGIGGSG++ +A++ + GF ++GSDL S+ + L + GA + I
Sbjct: 14 EACPAMRARVNNIHMVGIGGSGMNGIAEVLINMGFTITGSDLSASAAVRRLEKLGATVFI 73
Query: 126 GHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIA 185
GH N+ + ++ S+AIP N E++ AK G+PI R LA+L +A
Sbjct: 74 GHGADNVGDAE------VLIKSTAIPDKNPEVIAAKERGIPIIPRAEMLAELMRLRTGVA 127
Query: 186 VSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCF 245
++G+HGK+TT S+LA + G D T I+G + F + G G + EADE DG F
Sbjct: 128 IAGTHGKTTTTSLLATIFTEAGLDPTVIIGGKLNTF-GANARLGEGDYLIAEADESDGSF 186
Query: 246 LGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 305
L LSP + VVTN+D +H+D + D+ A+ F +F+ I G V+CGD + + LL I
Sbjct: 187 LLLSPIITVVTNVDRDHMDFYADQQAIDDSFTKFMNSIPFYGMNVVCGDDEGVQRLLPNI 246
Query: 306 KQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER 365
K+ +TYG N E + +++ S + +
Sbjct: 247 KR-------------------------PCLTYGLGPKNKLRGEIISSHLR--SIFRVYLD 279
Query: 366 GRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
G+ ++++ PGVHNVLN+LA I L +K+ LS F GV RRF+
Sbjct: 280 GKEWGEVTVAQPGVHNVLNALACIGVALEAGLEKKDIING-------LSNFGGVGRRFER 332
Query: 426 IGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
G G + DD+ HHP E+ A L+ A++ FP++ L+ FQPH +SR L DF +
Sbjct: 333 KGERKGVMVVDDYGHHPAEILATLKTAKECFPDRRLVIAFQPHRFSRTQALFGDFCKVFA 392
Query: 486 EADQVVVSAV 495
EAD ++++ +
Sbjct: 393 EADLLMLTEI 402
>gi|334341857|ref|YP_004546837.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfotomaculum ruminis
DSM 2154]
gi|334093211|gb|AEG61551.1| UDP-N-acetylmuramate/alanine ligase [Desulfotomaculum ruminis DSM
2154]
Length = 461
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 155/425 (36%), Positives = 232/425 (54%), Gaps = 41/425 (9%)
Query: 72 KNRKGWIHFVGIGGSGLSALAKLALKQG-FEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K ++ IHFVGIGG+G+S +A + L G + VSGSDL ++ +E L GA + GH+
Sbjct: 4 KEKEKRIHFVGIGGAGMSGIAAVLLGMGGYRVSGSDLKRTAVVERLENLGATCYTGHAAE 63
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N+ D V+ S+AI DN E+L A+ G+P+ +R LA+L + IAV+G+H
Sbjct: 64 NLMDVD------MVITSTAISPDNPEVLEAQRRGIPLVRRGAMLARLMNEKRGIAVAGAH 117
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT SM++ VL+ G D T ++G + G+ G G+ V EADE DG FL LSP
Sbjct: 118 GKTTTTSMISLVLEKSGFDPTILIGGDLSDI-GGNAKQGQGEYLVAEADESDGSFLLLSP 176
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
+AVVTN++ +H+D + ++ + F FL ++ G V+C D +++ ++
Sbjct: 177 EIAVVTNIEDDHLDHYGSKENIIKAFMEFLNKVPAKGLSVLCLDDPVIKTISTEL----- 231
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
S VV+ S D G DY + +Y F + G S ++ RG L
Sbjct: 232 ---SCPVVTYGSED---SGADYILSSYEFRN--------------GISRAVVTFRGERLG 271
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+ L +PG HN+LN+LA +AT L D Q S+A F G RR+ L+G
Sbjct: 272 VLELVVPGYHNLLNALATVATGRYLGLDFEQVARSLAG-------FKGAKRRYQLLGETK 324
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
G I DD+AHHPTE++A LQAAR P + L+ VFQPH Y+R L +F + AD +
Sbjct: 325 GIKIVDDYAHHPTEIKATLQAARHAHPGR-LLVVFQPHRYTRTRQLFREFGESFHHADVI 383
Query: 491 VVSAV 495
+++ +
Sbjct: 384 ILTDI 388
>gi|289549278|ref|YP_003474266.1| UDP-N-acetylmuramate/alanine ligase [Thermocrinis albus DSM 14484]
gi|289182895|gb|ADC90139.1| UDP-N-acetylmuramate/alanine ligase [Thermocrinis albus DSM 14484]
Length = 448
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 151/425 (35%), Positives = 228/425 (53%), Gaps = 40/425 (9%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
F+ + +HFVG+GG G+S LA L ++ G+ VSGSD+ S + L +AG ++IGH
Sbjct: 2 FREKVKRLHFVGVGGIGMSGLALLMMQMGYTVSGSDIKESRNTQMLKDAGIRVYIGHRPE 61
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N++ VV SSA+ DN E+++A+S G+P R LA+L +AV GSH
Sbjct: 62 NVED------AQVVVYSSAVSSDNPELVYARSRGIPTIPRGEMLAELFRIKEGVAVCGSH 115
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT SM+AY+L G D T ++G + +F +G+ G G V EADE DG FL L+P
Sbjct: 116 GKTTTTSMIAYILHEAGLDPTVLIGGILQRF-NGNARLGKGDFIVSEADESDGSFLKLTP 174
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
+VAV+TN+D EH+D ++D D+++ F F + G V+ D + ++ + +
Sbjct: 175 TVAVITNIDREHLDFYKDYDSIRKAFLEFANSVPFYGFSVLNADDEGCSQIIPYVSK--- 231
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
K TYG + A+++ ++G + + G+ L
Sbjct: 232 ----------------------KHYTYGIQTEAHLMAKNLRL-LEGTYSFDVVWMGKNLG 268
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
I L++PG HNV N+LA I L Q S +K L F RR +L G
Sbjct: 269 NIHLKVPGKHNVQNALASILVAL-------QMDVSFDVIKEALESFRNAERRLELKGFYK 321
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
G +YDD+ HHPTE+R+V++A R+ +P+ ++ VFQPH YSR L DFA L EAD
Sbjct: 322 GFPVYDDYGHHPTEIRSVIKAVREMYPDTKILLVFQPHRYSRTYYLLQDFATVLREADSC 381
Query: 491 VVSAV 495
+V+ +
Sbjct: 382 IVTDI 386
>gi|134298544|ref|YP_001112040.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfotomaculum reducens
MI-1]
gi|189029171|sp|A4J2B2.1|MURC_DESRM RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|134051244|gb|ABO49215.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfotomaculum reducens
MI-1]
Length = 462
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 155/428 (36%), Positives = 234/428 (54%), Gaps = 40/428 (9%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQG-FEVSGSDLVWSSYMEGLLEAGANLHIGH 127
+ + + +HF+GIGG+G+S +A + L+ G ++VSGSD+ S+ ++ L GA +IGH
Sbjct: 1 MQLQGKDKKVHFIGIGGAGMSGIATVMLEMGGYQVSGSDIKRSAVIDRLENLGAKCNIGH 60
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
SNI +AVV S+AI +N EIL + +G+P+ +R LA+L ++ IAV+
Sbjct: 61 KTSNINNE-----IDAVVYSTAISPENPEILETQRLGIPLIRRGQMLARLMKEKKGIAVA 115
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT SM A +L+ D T I+G + G+ G G+ V EADE DG FL
Sbjct: 116 GAHGKTTTTSMTALILEENSFDPTIIIGGDLSNI-GGNAKLGQGEYMVAEADESDGSFLL 174
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
L P++AVVTN++ +H+D + + + FR+FL ++ G VIC D + +
Sbjct: 175 LDPNIAVVTNIEDDHLDYYGTRENIAKAFRQFLAKLSAEGLAVICLDDPVLKEIT----- 229
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR 367
TGL VV+ S G G DY+I + N V G Y ER
Sbjct: 230 -TGLTCQ--VVTYGS---LGSGADYQIKV--LETRN---------GVNQGEVYFQEER-- 270
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
L + L +PG HN+LN++A +A IG R + + L KF G RRF +IG
Sbjct: 271 -LGMLELHVPGYHNLLNAMAAVA-----IG--RHLNLDFEKIARALRKFTGAKRRFQVIG 322
Query: 428 TIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ G + DD+AHHPTEV+A LQAAR P + ++ +FQPH YSR L +F + +
Sbjct: 323 KVNGITVVDDYAHHPTEVKATLQAARTSHPGR-IVTIFQPHRYSRTKQLFKEFGQSFTNG 381
Query: 488 DQVVVSAV 495
D ++++ +
Sbjct: 382 DLIILTDI 389
>gi|383764762|ref|YP_005443744.1| UDP-N-acetylmuramate--L-alanine ligase [Caldilinea aerophila DSM
14535 = NBRC 104270]
gi|381385030|dbj|BAM01847.1| UDP-N-acetylmuramate--L-alanine ligase [Caldilinea aerophila DSM
14535 = NBRC 104270]
Length = 474
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 142/424 (33%), Positives = 223/424 (52%), Gaps = 31/424 (7%)
Query: 72 KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSN 131
++R +H +GIGG+GLSA+A + L G +VSGSD + ++ L E GA + IG N
Sbjct: 13 RDRSLRVHLIGIGGAGLSAIASVLLDMGLQVSGSDRQPGALLQRLAEHGAQIVIGQRAEN 72
Query: 132 IQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHG 191
+ + P+ V+ SSA+ N E A+++G+P+ KR+ +L L +IAV+G+HG
Sbjct: 73 LTERPLAERPDVVLISSAVDAQNPERRAAEALGIPVVKRNEFLPALLAGRRVIAVAGTHG 132
Query: 192 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPS 251
K+TT +M L+ G + I+G+ VP +G+ G FV+EADEYD FLGL PS
Sbjct: 133 KTTTTAMTVQALRRGGIECGYIIGSEVPGLGNGAA--GTAPEFVIEADEYDHMFLGLHPS 190
Query: 252 VAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
+AV+TN++W+H D + + + F +F + G +V C D + R ++
Sbjct: 191 IAVITNVEWDHPDCYPTPASFRRAFVQFTDNVDRNGLIVACSDDEGVRRVM--------- 241
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQ 371
+ + I YG + D A +V G + L P +
Sbjct: 242 -------------AYAPSRGPRWIAYGLNETADLGARNVRSLPGQGVEADLVWWHAPKGK 288
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG 431
+ L +PGVHNV N+LA +A ++ S+ C L + G +RRF+ G G
Sbjct: 289 LELAVPGVHNVRNALAALAVGVS-------CGVSMDCALEALRGYQGSARRFEWKGEAGG 341
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+AHHPTE+ A L AAR+R+P++ + AVFQPHT+SR + + AD+V+
Sbjct: 342 VTVIDDYAHHPTEIEATLNAARRRYPDRRIWAVFQPHTFSRTQRMLYRMGESFDAADRVI 401
Query: 492 VSAV 495
V+ +
Sbjct: 402 VTDI 405
>gi|344995610|ref|YP_004797953.1| UDP-N-acetylmuramate--L-alanine ligase [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963829|gb|AEM72976.1| UDP-N-acetylmuramate--L-alanine ligase [Caldicellulosiruptor
lactoaceticus 6A]
Length = 455
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 151/417 (36%), Positives = 240/417 (57%), Gaps = 41/417 (9%)
Query: 80 FVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSR 139
F+GIGG +SA+A + QGF V GSD+ S+ + L E G N++IGH S+I G++
Sbjct: 6 FIGIGGISMSAIALILKNQGFWVEGSDIQESATTKMLRENGINVYIGHDESHIHGDE--- 62
Query: 140 FPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKSTTASM 198
V+ ++AI +DN E++ AK + + IY+R +L L + + N+IA+SG+HGK+TT SM
Sbjct: 63 ---TVIYTAAISKDNPELIAAKRMNLKIYERAEFLGLLMKNFKNVIAISGTHGKTTTTSM 119
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
+ Y+LK + T +VGA V Q G+ G + V+EA EY FL +P++ V+ N+
Sbjct: 120 IGYILKKACYNPTILVGAFVKQLG-GNFVIGSKEYLVVEACEYVDSFLKFNPTIGVILNI 178
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVV 318
D +H+D F+D D++K+ F++F ++I G LV D + + ++ ++ +
Sbjct: 179 DNDHLDYFKDIDSIKNSFKKFAQKIPTSGFLVANCDDKNVKDVISKLHTQVVC-----IS 233
Query: 319 SNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPG 378
+ + +D++ G S ND Y E +V+ +D I LA I L IPG
Sbjct: 234 TKEKADIFA----------GNISCNDGYYEF---DVKNNNDEI-------LAHIKLNIPG 273
Query: 379 VHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDF 438
HNV N+LA A L ES+ ++ LS+F G SRR + +G G +++DD+
Sbjct: 274 FHNVYNALAAFAVTSKL------GVESLT-IEHALSEFCGASRRLEKVGEFDGIYLFDDY 326
Query: 439 AHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
AHHPTE++A L A ++ + A+FQPHT+SRL L ++FA +L AD+V+V+ V
Sbjct: 327 AHHPTEIKATL-ATLKKLSEGKVFAIFQPHTFSRLKSLLNEFAESLKLADKVIVTDV 382
>gi|78356090|ref|YP_387539.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfovibrio alaskensis
G20]
gi|109892703|sp|Q313Q2.1|MURC_DESDG RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|78218495|gb|ABB37844.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfovibrio alaskensis
G20]
Length = 454
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 149/419 (35%), Positives = 215/419 (51%), Gaps = 43/419 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH VGIGG+G+ +A++ L GFEV GSD+ S + L GA++ IGH N+
Sbjct: 8 IHMVGIGGTGMCGIAEVLLNLGFEVRGSDMNDSPSVRRLRRLGADIFIGHGAENVTD--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V S+A+ DN E+ A+ G+PI R LA+L IA++G+HGK+TT S
Sbjct: 65 ---AQVLVKSTAVSMDNPEVQAAQEKGIPIIPRAEMLAELMRLRKGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+ A + G D T I+G + + + G G+ + EADE DG FL LSP V VVTN
Sbjct: 122 LTAAIFDEAGTDPTVIIGGRLNAYGSNARL-GEGEFLLAEADESDGSFLCLSPVVNVVTN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D +HVD + D+ A+ + F F+ ++ G V+CGD R LL QIK+
Sbjct: 181 VDLDHVDFYHDQQAIDTAFINFMNKVPFYGMNVVCGDDAGVRRLLPQIKR---------- 230
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESV-CPNVQGGSDYILCERGRPLAQISLQI 376
++TYGF N AE+V C S + + G L +++L
Sbjct: 231 ---------------PVLTYGFGPDNQLRAETVTCGET---SRFRVLLHGEDLGEVNLVQ 272
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG HNVLN+LA I L + CL+ L+ F GV RRF+ G G + D
Sbjct: 273 PGRHNVLNALAAIGVGL------ETGIAADVCLR-GLANFRGVGRRFERKGERGGVLVVD 325
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+ HHP E+ A L AR +P + L+ FQPH +SR L DF A D+++++ +
Sbjct: 326 DYGHHPAEIAATLATARTCYPGRRLVVAFQPHRFSRTKALFGDFCKAFDNVDKLLLTEI 384
>gi|334127475|ref|ZP_08501387.1| UDP-N-acetylmuramate--L-alanine ligase [Centipeda periodontii DSM
2778]
gi|333389429|gb|EGK60594.1| UDP-N-acetylmuramate--L-alanine ligase [Centipeda periodontii DSM
2778]
Length = 776
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 159/430 (36%), Positives = 231/430 (53%), Gaps = 48/430 (11%)
Query: 71 FKNRKGW--IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHI-GH 127
K+ KG IHFVGIGG+G+S LAK+ L G++VSGSD S +E L+ GA + G
Sbjct: 2 LKDLKGIHNIHFVGIGGAGMSPLAKILLLLGYKVSGSDQGSSPIIEELVRLGARVWTDGQ 61
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
N++G D A+V SSAIP DN E++ A + +P R A L +Y IAV+
Sbjct: 62 HAENVRGAD------AIVVSSAIPYDNPEVIAAWDLRIPKLHRSDINAALVNEYEGIAVA 115
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
GSHGK+TT SM+ L +G T IVG VP + G G+ V EADE DG FL
Sbjct: 116 GSHGKTTTTSMIGVTLDRVGVSPTIIVGGEVPDLGTNAKL-GTGRYLVSEADESDGSFLK 174
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
L P +AVVTN++ +H+D + + + + FR F+ Q+ G ++C +++ R + + K+
Sbjct: 175 LRPHIAVVTNVEDDHMDHYGTMEKIIAAFRTFVDQVDEDGTAILCFENEILRQIARETKR 234
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS--DYILCER 365
+I+Y + D+ A + + GS + + ER
Sbjct: 235 -------------------------CVISYAIDTEADYRAADIETH---GSIISFTVFER 266
Query: 366 GRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
G L +ISL IPG HNVLN+LA IA R + + A ++ L+ F G RRF
Sbjct: 267 GTELGRISLNIPGRHNVLNALACIAVA-------RLADVAFAQIQDALAGFHGAKRRFQT 319
Query: 426 IGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
G G + DD+AHHPTE+ L AARQ P++ L+ VFQPH YSR +L+++F +
Sbjct: 320 KGKERGVWVVDDYAHHPTEIAVTLAAARQTNPSR-LVCVFQPHRYSRTQLLREEFGACFA 378
Query: 486 EADQVVVSAV 495
AD ++++ V
Sbjct: 379 AADLLILTDV 388
>gi|392412987|ref|YP_006449594.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfomonile tiedjei DSM
6799]
gi|390626123|gb|AFM27330.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfomonile tiedjei DSM
6799]
Length = 466
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 162/463 (34%), Positives = 242/463 (52%), Gaps = 45/463 (9%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
FK K +HFVGIGG G+S +A++ L GF +SGSD+ S E L E GA + IGH
Sbjct: 6 FKQVKD-VHFVGIGGVGMSGIAEIMLALGFGISGSDVRGSGMTERLKELGARIWIGHHRD 64
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
+++ D VV SSA+ DN E++ A+ +PI R LA+L + V+G H
Sbjct: 65 HLEKAD------VVVFSSAVSMDNPELMAARERMIPIIPRAEMLAELMRMQTSVTVAGMH 118
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT SM+A VL A G D T ++G + G+ G G V EADE D FL L P
Sbjct: 119 GKTTTTSMIASVLSAAGLDPTVVIGGKLDTLGSGARL-GAGDLLVAEADESDRSFLKLFP 177
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
++AVVTN+D EH+D + + ++S+F ++ +I G+ ++C D ++++ I++
Sbjct: 178 TIAVVTNMDLEHLDCYSSIEEIRSVFLEYINRIPFYGYAIVCLDDPQVQNIIPHIEK--- 234
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG-SDYILCERGRPL 369
+ ITYG S+ +++A P + G + + + + L
Sbjct: 235 ----------------------RFITYGLSTQANFHARR--PVFESGVTSFEVYKEHTRL 270
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
+I L +PG+HN+++SLA + TV L AC + L F GV RRF + G
Sbjct: 271 GEIRLPMPGIHNLVDSLAAV-TVADLF------DVPFACTQEALESFPGVQRRFTVRGKA 323
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
G I DD+ HHPTE+RAVLQAARQ P++ + +FQPH Y+R L DF +AD
Sbjct: 324 DGITIIDDYGHHPTEIRAVLQAARQIAPSR-IAVLFQPHRYTRTQALFQDFLTCFHDADL 382
Query: 490 VVVSAVL-VFWLIIFAVSSFWLIMAINSVICIVRSMLPEKQMI 531
+ V + I V+ + L I+S LP++Q I
Sbjct: 383 LYVMDIYPASEKPIEGVTGWALSQGIHSRGHKTVRFLPDRQAI 425
>gi|422343137|ref|ZP_16424065.1| hypothetical protein HMPREF9432_00125 [Selenomonas noxia F0398]
gi|355378444|gb|EHG25624.1| hypothetical protein HMPREF9432_00125 [Selenomonas noxia F0398]
Length = 776
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 158/430 (36%), Positives = 229/430 (53%), Gaps = 48/430 (11%)
Query: 71 FKNRKG--WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHI-GH 127
K+ KG IHF+GIGG+G+S LAK+ L G++VSGSD S +E L+ GA + G
Sbjct: 2 LKDLKGIHAIHFIGIGGAGMSPLAKILLLLGYQVSGSDQGTSPIIEELIRLGARIWTDGQ 61
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
N++G D A+V S+AIP DNVE++ A + +P R A L Y+ IAV+
Sbjct: 62 HAENVRGAD------AIVVSTAIPYDNVEVIAAWDLRIPKLHRSDINAALVNAYDGIAVA 115
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
GSHGK+TT SM+ L G T IVG VP + G G+ V EADE DG FL
Sbjct: 116 GSHGKTTTTSMIGVTLDCAGVSPTIIVGGEVPDLGTNAKL-GTGRYLVSEADESDGSFLK 174
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
L P +AVVTN++ +H+D + + + FR F+ Q G V+C +++ +L QI +
Sbjct: 175 LRPHIAVVTNVEDDHMDHYGTMEKIIEAFRTFVDQTDADGTAVLCFENE----ILRQIAR 230
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS--DYILCER 365
+T ++++Y + D+ A + + GS + ER
Sbjct: 231 ET---------------------PRRVVSYAIDAEADYRAADMETH---GSVISFTAFER 266
Query: 366 GRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
G + ++ L IPG HNVLN+LA IA R + ++ L++F G RRF
Sbjct: 267 GAEMGRVLLNIPGRHNVLNALACIAVA-------RLAGVEFPEIRRALAQFHGAKRRFQT 319
Query: 426 IGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
G G + DD+AHHPTE+ A L AARQ P + LI VFQPH YSR +L+++F +
Sbjct: 320 KGKERGVWVVDDYAHHPTEIAATLAAARQTNPGR-LICVFQPHRYSRTQLLREEFGTCFA 378
Query: 486 EADQVVVSAV 495
AD ++++ V
Sbjct: 379 AADLLLLTDV 388
>gi|410667614|ref|YP_006919985.1| UDP-N-acetylmuramate--L-alanine ligase MurC [Thermacetogenium
phaeum DSM 12270]
gi|409105361|gb|AFV11486.1| UDP-N-acetylmuramate--L-alanine ligase MurC [Thermacetogenium
phaeum DSM 12270]
Length = 458
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 148/421 (35%), Positives = 233/421 (55%), Gaps = 45/421 (10%)
Query: 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI-QGN 135
W HF+GIGG G+S LA++ L +G +VSGSDL S ++ L + GA++ IGH+ NI +G
Sbjct: 5 WYHFIGIGGVGMSGLARVLLDRGMKVSGSDLAASPIIDKLRQLGAHVAIGHAAENIVEGI 64
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D VV SSA+ N+E+ A+ G+P+ R LA++ + Y IAV+G+HGK+TT
Sbjct: 65 D------EVVVSSAVHPSNIELSTARQKGIPVITRGGLLARVMDDYKSIAVTGAHGKTTT 118
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
++M+A VLK G D T ++G V + G+ G G+ V E+DE DG FL P AV+
Sbjct: 119 SAMIALVLKKNGLDPTYLIGGQVSEL-GGNAGSGRGEYLVAESDESDGSFLKQEPYAAVI 177
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D +H+D ++ D + F+ FL +++ G V+C D++ + L DT
Sbjct: 178 TNIDDDHLDYYKSLDGILQAFQDFLARLQRTGFAVLCTDNENVQKL------DT------ 225
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAES-VCPNVQGGSDYILCERGRPLAQISL 374
+ +TYG + ++ A++ VC S+ + + GR L ++SL
Sbjct: 226 --------------SSVEAVTYGLNGSPNFQAKNVVCKGFASESE--VFQDGRLLGKLSL 269
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHI 434
+PG+HNV N+LA IA + L D +++C F GV RRF L+ G I
Sbjct: 270 SVPGLHNVQNALAAIAVGMRLGLDFSSIARALSC-------FRGVERRFQLVAQYDGVWI 322
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSA 494
DD+AHHP+E+R +++ +I VFQPH Y+R +LK+ F + +D V+++
Sbjct: 323 VDDYAHHPSEIRELVKTGLG-IKRGRMIVVFQPHRYTRTKLLKEGFGRSFRGSDLVIITD 381
Query: 495 V 495
+
Sbjct: 382 I 382
>gi|158321669|ref|YP_001514176.1| UDP-N-acetylmuramate--L-alanine ligase [Alkaliphilus oremlandii
OhILAs]
gi|189028969|sp|A8MK48.1|MURC_ALKOO RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|158141868|gb|ABW20180.1| UDP-N-acetylmuramate--alanine ligase [Alkaliphilus oremlandii
OhILAs]
Length = 465
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 142/421 (33%), Positives = 229/421 (54%), Gaps = 45/421 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH +GIGG +SA+A++ L QG+ VSGSD+ S+ + L GA + IGH+ N++
Sbjct: 14 IHLIGIGGISMSAIAEILLNQGYRVSGSDMNDSNIINKLRAHGAEIFIGHNEDNVKD--- 70
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYN-LIAVSGSHGKSTTA 196
P+ VV ++AI + N E + AK +P R L + + Y IAVSGSHGK+TT
Sbjct: 71 ---PDLVVYTAAIKEHNPERMAAKERNIPQIDRAEMLGIIMKNYKKAIAVSGSHGKTTTT 127
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
S+++ +++ D T +VG + + G+I G ++F+ EA EY FL P + ++
Sbjct: 128 SLISLIMEYSNLDPTIMVGGELDEIG-GNIKIGNSEHFITEACEYVESFLKFYPFIGIIL 186
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N+D +H+D F+D + +K FR+F+ I G L+ GD + +L I+ +
Sbjct: 187 NIDEDHLDYFKDLNHIKEAFRKFINLIPQEGFLIANGDDANVQEILHSIECN-------- 238
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+ITYG S N + A ++ G + + +G + L I
Sbjct: 239 -----------------LITYGLDSSNTFVARNISFTNDGYPIFTVDFKGESMGTFELNI 281
Query: 377 PGVHNVLNSLAVIAT--VLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHI 434
PG HN+ N+LA IAT +L + + Q+H + KF G+ RRFD++G + GC I
Sbjct: 282 PGKHNIYNALASIATAYLLGVEPSEIQNH---------IKKFRGIHRRFDILGEVKGCKI 332
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSA 494
DD+AHHP E+ A L+AA+ +P+ + VFQPHT+SR L +DF+ + + AD ++++
Sbjct: 333 VDDYAHHPVEISATLEAAKN-YPHNKIWCVFQPHTFSRTKALLEDFSRSFTNADHIIITD 391
Query: 495 V 495
+
Sbjct: 392 I 392
>gi|284048638|ref|YP_003398977.1| UDP-N-acetylmuramate--L-alanine ligase [Acidaminococcus fermentans
DSM 20731]
gi|283952859|gb|ADB47662.1| UDP-N-acetylmuramate/alanine ligase [Acidaminococcus fermentans DSM
20731]
Length = 461
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 160/435 (36%), Positives = 237/435 (54%), Gaps = 55/435 (12%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
+VD K IHF+GIGG+G+SALA + +K+G+ VSGSD L + GA + IGH
Sbjct: 1 MVDLDKIKN-IHFIGIGGAGMSALAYVMIKRGYHVSGSDAKPGYMATKLAKEGALVFIGH 59
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
+ I+ VV S+AI DN E++ A VP+ R LA L ++ IAV+
Sbjct: 60 AACQIE------RAEVVVVSTAIHPDNPELVEAHRRQVPVIHRSDVLAWLMNRHKGIAVA 113
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFL 246
G+HGK+TT+SML+ + G D T +VG V GS G ++V+ EADE DG FL
Sbjct: 114 GAHGKTTTSSMLSCITSDCGLDPTIVVGGIVNNL--GSNAASGKSDWVVAEADESDGSFL 171
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 306
+P +AVVTN++ +H+D + ++ ++ F +F+ QI+ G V+C D+ R++
Sbjct: 172 KFNPYIAVVTNIEDDHLDHYGSQENIQKAFAQFVSQIKEDGCAVLCYDNDRVRTI----- 226
Query: 307 QDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFN-DWYAESVCPNVQGGSDYILCER 365
G+ D ++I+YG S + D+ A+++ G+ + + +
Sbjct: 227 --------------------GEATDKRVISYGIDSQDADYQAKNIIYGTD-GTHFDVVYQ 265
Query: 366 GRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLP-----LSKFMGVS 420
G + Q L IPG HNVLNSL IA L L+LP L KF G
Sbjct: 266 GETIGQGHLIIPGRHNVLNSLGAIAAAREL------------GLELPDILTSLEKFSGAK 313
Query: 421 RRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
RRF+ G G + DD+AHHPTE++A L+AARQ P + LI VFQPH Y+R +L D+F
Sbjct: 314 RRFETKGKADGIWVVDDYAHHPTEIQATLKAARQTHPER-LIVVFQPHRYTRTQLLLDEF 372
Query: 481 ANALSEADQVVVSAV 495
A A +AD+++V+ +
Sbjct: 373 AVAFKDADKLIVTDI 387
>gi|383458058|ref|YP_005372047.1| UDP-N-acetylmuramate--L-alanine ligase [Corallococcus coralloides
DSM 2259]
gi|380733529|gb|AFE09531.1| UDP-N-acetylmuramate--L-alanine ligase [Corallococcus coralloides
DSM 2259]
Length = 474
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 154/427 (36%), Positives = 230/427 (53%), Gaps = 44/427 (10%)
Query: 71 FKNRKG-WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSV 129
FK R +HFVG+GG G+S +A++ L G+ VSGSDL S L + GA L+ GH
Sbjct: 14 FKTRHAAHVHFVGVGGIGMSGIAEVLLNLGYRVSGSDLRESDITRRLAKLGATLYEGHKA 73
Query: 130 SNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGS 189
SN+ D VV SSA+ +DN E++ A+ +P+ R LA+L +AV+GS
Sbjct: 74 SNLVHAD------VVVISSAVRKDNPEVVTARQRKIPVIPRAEMLAELMRLKYAVAVAGS 127
Query: 190 HGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLS 249
HGK+TT SM+A VL A G D TA+VG V D + G + V+EADE DG FL L
Sbjct: 128 HGKTTTTSMVATVLSAAGLDPTAVVGGKV-NVLDSNAKLGKSELMVVEADESDGSFLKLH 186
Query: 250 PSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
PS+AVVTN+D EH+D + D + ++S F F ++ G V+C D+ ++LL +I++
Sbjct: 187 PSIAVVTNIDPEHMDHYGDLETLQSAFVEFCNRVPFYGLNVLCLDNPNVQALLPRIEK-- 244
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRP 368
+ +TYG S D+ E + + G + + R
Sbjct: 245 -----------------------RFVTYGSSHMADYRLEGIA--LDGFTTTFRAFRRDED 279
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
L + +++ G HN N+LAV+A + + ++ L++F GV RRF + G
Sbjct: 280 LGEFRVRMVGAHNAFNALAVVAIA-------EEMDIPLETVRSALAEFGGVQRRFTVRGE 332
Query: 429 IYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
+ G + DD+ HHPTEV A L AR+ F + ++A FQPH Y+R L +FA A ++AD
Sbjct: 333 VGGITVVDDYGHHPTEVMATLSGARRAF-GRRVVAAFQPHRYTRTHDLMKEFATAFNDAD 391
Query: 489 QVVVSAV 495
+ V++V
Sbjct: 392 VLFVTSV 398
>gi|357058717|ref|ZP_09119564.1| hypothetical protein HMPREF9334_01281 [Selenomonas infelix ATCC
43532]
gi|355373508|gb|EHG20826.1| hypothetical protein HMPREF9334_01281 [Selenomonas infelix ATCC
43532]
Length = 776
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 161/430 (37%), Positives = 227/430 (52%), Gaps = 48/430 (11%)
Query: 71 FKNRKGW--IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHI-GH 127
K+ KG IHFVGIGG+G+S LAK+ L G+ VSGSD S +E L+ GA + G
Sbjct: 2 LKDLKGIQNIHFVGIGGAGMSPLAKILLLLGYNVSGSDQGTSPIIEELVRLGARVWTDGQ 61
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
N++G D A+V S+AIP DN E++ A + +P R A L +Y+ IAV+
Sbjct: 62 RAENVRGAD------AIVVSTAIPYDNPEVIAAWDLRIPKLHRSDINAALVNEYDGIAVA 115
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
GSHGK+TT SM+ L +G T IVG VP + G + V EADE DG FL
Sbjct: 116 GSHGKTTTTSMIGVTLDRVGVSPTIIVGGEVPDLGTNAKL-GTSRYLVSEADESDGSFLK 174
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
L P VAVVTN++ +H+D + + + FR F++Q+ G ++C +++ R L + K+
Sbjct: 175 LRPHVAVVTNVEDDHMDHYGTMEKIIDAFRTFIEQVDEDGTAILCFENEILRKLAAETKR 234
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS--DYILCER 365
++I+Y D+ A + + GS + + ER
Sbjct: 235 -------------------------RVISYAIDQEADYRAADIETH---GSIISFTVFER 266
Query: 366 GRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
G L +ISL IPG HNVLN+LA IA R + S A ++ L+ F G RRF
Sbjct: 267 GAELGRISLNIPGRHNVLNALACIAVA-------RLADVSFAQIQDALAGFHGAKRRFQT 319
Query: 426 IGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
G G + DD+AHHPTE+ L AAR P K LI VFQPH YSR +L+ +F +
Sbjct: 320 KGKERGIWVVDDYAHHPTEIAVTLTAARATNP-KRLICVFQPHRYSRTNLLRTEFGACFA 378
Query: 486 EADQVVVSAV 495
AD ++++ V
Sbjct: 379 AADLLLLTDV 388
>gi|379723733|ref|YP_005315864.1| protein MurC [Paenibacillus mucilaginosus 3016]
gi|378572405|gb|AFC32715.1| MurC [Paenibacillus mucilaginosus 3016]
Length = 459
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 146/424 (34%), Positives = 229/424 (54%), Gaps = 43/424 (10%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
N IHF+GIGG G+SA+AK+ L+ G++VSGSDL E L GA + IGH N+
Sbjct: 2 NTSEHIHFIGIGGYGMSAIAKVMLEMGYQVSGSDLAQQELTEKLAAKGAQVFIGHEAENV 61
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
+G D VV S+A+ +DNVE+ A+ + +PI R LA+L IAV+G+HGK
Sbjct: 62 KGAD------VVVYSTALSKDNVEMAAAEELNIPILHRSQMLARLMNAKKGIAVAGAHGK 115
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+TT+SM+A VL+ G D T I+G + + G G V EADE DG FL P++
Sbjct: 116 TTTSSMIALVLEHCGSDPTFIIGGEIMNVGSNA-KAGKGDWVVAEADESDGSFLQYHPTI 174
Query: 253 AVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
A+V N++ +H++ + D + +K + +FL Q++ G V+C D ++ QI+ +
Sbjct: 175 ALVNNIEADHLENYNGDFENLKKAYAQFLSQVKADGKAVVCLDDAYLSGMIPQIQSE--- 231
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQ 371
+ITYG S D A ++ + S + + G+ L
Sbjct: 232 ----------------------VITYGIHSDADVTAHNIVLGDRKVS-FEVMRGGQLLGT 268
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG 431
ISL +PG HNV N++A + T + ++ + A + + +F G RRF ++G +
Sbjct: 269 ISLSVPGKHNVYNAMATLITCM-------EAGLTFAQVAEAIKEFRGAKRRFQVLGEVND 321
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+AHHPTE+ A + AA+ K +IAVFQP Y+R L + F+ A +AD+V+
Sbjct: 322 ILVIDDYAHHPTEIEATILAAKA--TGKRIIAVFQPQRYTRTYFLFEQFSRAFPDADEVI 379
Query: 492 VSAV 495
++ +
Sbjct: 380 ITDI 383
>gi|357419817|ref|YP_004932809.1| UDP-N-acetylmuramate--L-alanine ligase [Thermovirga lienii DSM
17291]
gi|355397283|gb|AER66712.1| UDP-N-acetylmuramate--L-alanine ligase [Thermovirga lienii DSM
17291]
Length = 479
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 149/421 (35%), Positives = 228/421 (54%), Gaps = 42/421 (9%)
Query: 72 KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSN 131
K RK H +GIGG+G+S LA L + G EVSG D+ S Y++ + + G + IGHS +
Sbjct: 10 KYRK--FHLMGIGGAGMSGLALLLSQLGCEVSGCDVAHSYYIDKISKKGIDFRIGHSKEH 67
Query: 132 IQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHG 191
I+ + P+ +V SSAIP N E+ A S G+PIYKR L+ L + + I V+G+HG
Sbjct: 68 IEELE----PDVLVCSSAIPAGNSELKFASSKGIPIYKRAEVLSWLFNERSGIGVAGTHG 123
Query: 192 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPS 251
K+TTASM+ + + + T +G + G+ G G + E DE DG F +
Sbjct: 124 KTTTASMIGLIFELAKTNPTVAIGGELCDI-GGNAKLGKGPYMIAELDESDGSFELFNSE 182
Query: 252 VAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
VA+VTN DW+HVD + +V + F+RFL + G V+CG+ + + L+
Sbjct: 183 VAIVTNADWDHVDHYPHFHSVINAFKRFLHNRKEQGLAVVCGEDKGVQVLM--------- 233
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQ 371
+SSDL I+TYG+ + DW A V GG+ + + +G+ +
Sbjct: 234 ---------ESSDL------DNIVTYGWGTSWDWGAIDVVHKSGGGTSFKVLHKGKTVDT 278
Query: 372 ISLQIPGVHNVLNSLA--VIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
+ L++ G HNVLN+LA V+ + ++ D +K L+KF G RR +G I
Sbjct: 279 VELRVSGDHNVLNALAAYVVGSTYSIPQD---------IIKEALNKFSGAKRRLQHMGKI 329
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
I+DD+ HHP+E+ A L A ++ FP + + A+FQPH Y+R + +FA +LS AD+
Sbjct: 330 GDVDIFDDYGHHPSEINATLMALKKTFPQRRITAIFQPHRYTRTAAMYREFAESLSIADK 389
Query: 490 V 490
V
Sbjct: 390 V 390
>gi|374294793|ref|YP_005044984.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium clariflavum DSM
19732]
gi|359824287|gb|AEV67060.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium clariflavum DSM
19732]
Length = 471
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 148/430 (34%), Positives = 235/430 (54%), Gaps = 43/430 (10%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
++D KN K +HF+GIGG +S LA++ G+ +SGSD+ S E L + G N++IGH
Sbjct: 6 LLDSKNIKN-VHFIGIGGISMSGLAEILKNLGYNISGSDMKSSDITEKLKKDGINIYIGH 64
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAV 186
NI+ D VV ++A+ ++N E+ AK +G+P +R L ++T+KY IA+
Sbjct: 65 REENIENCD------LVVYTAAVKENNPELKKAKQLGIPTIERAVLLGQITKKYPYSIAI 118
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
SG+HGK+TT SM++ ++ + T +G + G+ GG + F+ EA EY FL
Sbjct: 119 SGTHGKTTTTSMISMIMLEANLNPTIHIGGELDAI-GGNTRIGGNEYFITEACEYVESFL 177
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 306
L P +AV+ N++ +H+D F+D + +K F +F+ + G+++ C D SL+ Q
Sbjct: 178 KLHPYLAVILNIEADHLDYFKDINHIKQAFLKFMNLVPEDGYIIACIDDPNVSSLVCQ-- 235
Query: 307 QDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFN-DWYAESVCPNVQGGSDYILCER 365
++TYG S N DW A ++ +V G + + L +
Sbjct: 236 -----------------------SSCNVVTYGIKSENADWTARNIKFDVSGCASFDLVQN 272
Query: 366 GRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
G + I L++PG+HNV NSLA A TL I + L F G RRF++
Sbjct: 273 GNIITTIKLKVPGIHNVSNSLAAAAACHTL-------GCGINNIVTGLESFSGTHRRFEV 325
Query: 426 IGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
G + I DD+AHHP+E++A L+AA+ +K + VFQPHTY+R +L DDF+ A
Sbjct: 326 KGVVDNIKIVDDYAHHPSEIKATLKAAKSSSHSK-IWCVFQPHTYTRTKLLLDDFSEAFF 384
Query: 486 EADQVVVSAV 495
+AD+V+V+ +
Sbjct: 385 DADKVIVTDI 394
>gi|345018837|ref|YP_004821190.1| UDP-N-acetylmuramate--L-alanine ligase [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344034180|gb|AEM79906.1| UDP-N-acetylmuramate--L-alanine ligase [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 464
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 147/420 (35%), Positives = 231/420 (55%), Gaps = 43/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG +S LA + L G V+GSD+ S +E L + GA + I H+ ++I G D
Sbjct: 11 VHFIGIGGISMSGLAHILLNNGHIVTGSDIKNSHIIERLRQEGAVITIPHNENSIIGAD- 69
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTTA 196
VV ++AI +DN E AK + +PI R L + +KY IAVSGSHGK+TT
Sbjct: 70 -----LVVYTAAIHEDNPEYQKAKELNIPIIDRATLLGLIMKKYKYGIAVSGSHGKTTTT 124
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
S+++ +L MG D T +VG V G++ G + FV EA EY FL P +AV+
Sbjct: 125 SLISVILDGMGFDPTVLVGGEVDVLG-GNVRVGNSEYFVTEACEYTDSFLKFYPYIAVIL 183
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N+D +H+D F++ D +K FR+F + G +V C D +++ + ++
Sbjct: 184 NVDSDHLDYFKNIDNIKQSFRQFANLVPPDGFVVACKDDANTMYVVNGLNKN-------- 235
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
I+TYG +DW A+++ + +G + + + + + L I
Sbjct: 236 -----------------IVTYGIYQDSDWKAKNISFDDKGCAIFDVYYKEEYMGNFKLSI 278
Query: 377 PGVHNVLNSLAVIA-TVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
PG HN+ N+LA +A + L I K+ SH L++F G RRF++ G + G I
Sbjct: 279 PGKHNIYNALAALAVSHLVGIDIKKASHY--------LTEFKGTHRRFEIKGIVDGITIV 330
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHP E++A L+AA+ +P+K +I +FQPHTYSR L +DFA + AD+++++ +
Sbjct: 331 DDYAHHPAEIKATLEAAKN-YPHKRIICIFQPHTYSRTKSLLNDFAESFDNADKIIIADI 389
>gi|139437196|ref|ZP_01771356.1| Hypothetical protein COLAER_00335 [Collinsella aerofaciens ATCC
25986]
gi|133776843|gb|EBA40663.1| UDP-N-acetylmuramate--L-alanine ligase [Collinsella aerofaciens
ATCC 25986]
Length = 472
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 153/418 (36%), Positives = 235/418 (56%), Gaps = 46/418 (11%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
HF+GIGG+G+S +A + ++G+ V+GSDL S Y+ L AG +H+GH + I
Sbjct: 17 HFIGIGGAGMSGIALVLHERGYAVTGSDLKTSRYIRQLTRAGVKVHVGHEAATID----E 72
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
P+ VV S+AIP+ N E++ A+ +G+P++ R L+ L Y +AV+G+HGK+TT+SM
Sbjct: 73 VKPDVVVVSTAIPESNPELVRARELGIPVWPRAKMLSALGHGYTTVAVAGTHGKTTTSSM 132
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
A +L MG D + ++G V + D + G G FV EADE D FL L+P+V +VTN+
Sbjct: 133 CATMLDRMGLDPSFLIGGIVEGY-DTNGKNGSGDYFVAEADESDSSFLFLNPNVVIVTNV 191
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVV 318
+ +H+D + + +++ F +F+ + G +++CG+ L ++ + TG
Sbjct: 192 EADHLDHYSGIEEIEATFAKFMSLVGEDGTVIVCGEDPH----LVELAKSTG-------- 239
Query: 319 SNQSSDLWGQGHDYKIITYGFSSFNDWYAESVC--PNVQG-GSDYIL-CERGRPLAQISL 374
+++YGF+ ND VC P+V+G SD+I+ E G A
Sbjct: 240 -------------RHVLSYGFAESNDI----VCMHPDVKGIQSDFIVRFEDGTEHAVEIK 282
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHI 434
PG HN+LN+ AV+ TV ++G I LS F GV RRF +G I G +
Sbjct: 283 SNPGRHNMLNATAVL-TVAHVLG------FDIDSAAKALSSFEGVRRRFTHVGDIDGITV 335
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
DD+ HHPTE++A L AA K + VFQPH YSRL L DDFA+A + AD++++
Sbjct: 336 VDDYGHHPTEIKATLAAA-SSLGYKHVDVVFQPHRYSRLQALCDDFADAFANADKLLL 392
>gi|146295400|ref|YP_001179171.1| UDP-N-acetylmuramate--alanine ligase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|166222969|sp|A4XGE5.1|MURC_CALS8 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|145408976|gb|ABP65980.1| UDP-N-acetylmuramate--alanine ligase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 455
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 152/417 (36%), Positives = 231/417 (55%), Gaps = 41/417 (9%)
Query: 80 FVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSR 139
+GIGG +SA+A + G V GSD+ S L E G N++IGH ++I+G++
Sbjct: 6 LIGIGGISMSAIALILKNHGHIVEGSDMQESITTRMLREKGINVYIGHDENHIKGDE--- 62
Query: 140 FPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKSTTASM 198
V+ ++AIP+DN E++ AK +G+ +Y+R +L L + Y N+IAVSG+HGK+TT SM
Sbjct: 63 ---IVIFTAAIPKDNPELVKAKRLGLKVYERAEFLGMLMKDYKNVIAVSGTHGKTTTTSM 119
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
+ Y+LK + T +VGA V Q G+ G + V+EA EY FL +PS+ V+ N+
Sbjct: 120 IGYILKKALLNPTVLVGAFVKQLG-GNFCIGSSEYLVVEACEYVDSFLNFNPSIGVILNI 178
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVV 318
D +H+D F+D +++K FR+F +I G +V D + S+ +KQ+ + +S
Sbjct: 179 DNDHLDYFKDIESIKDSFRKFALKIPQNGFIVANLDDENVYSVASYLKQNV-IYFS---- 233
Query: 319 SNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPG 378
+ +D W +S N +Y V D+ + L I L IPG
Sbjct: 234 TKTKADFWAD---------NITSCNGYYEFDVV-----NKDF------KHLCHIKLNIPG 273
Query: 379 VHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDF 438
HNV NSLA + TL DK E+I +F G SRR + +G I G +YDD+
Sbjct: 274 FHNVYNSLAAFSVAYTLGIDKNTIKEAIF-------EFCGASRRLEKLGKIDGIVLYDDY 326
Query: 439 AHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
AHHPTE+ A L+ + + + +I +FQPHT+SRL L + F +LS AD+V+V+ V
Sbjct: 327 AHHPTEIEATLRTLK-KLAKEKVIVIFQPHTFSRLKSLMEGFVKSLSLADKVIVTDV 382
>gi|338814002|ref|ZP_08626060.1| UDP-N-acetylmuramate--L-alanine ligase [Acetonema longum DSM 6540]
gi|337273992|gb|EGO62571.1| UDP-N-acetylmuramate--L-alanine ligase [Acetonema longum DSM 6540]
Length = 474
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 156/423 (36%), Positives = 228/423 (53%), Gaps = 47/423 (11%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG+G+S +AK+ ++ G VSGSD+ S + L GA + IGH N++G
Sbjct: 23 GRIHFVGIGGAGMSGIAKVLIEMGHPVSGSDINDSETVHKLQAIGAKIFIGHRKENVEG- 81
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
A+V S+AI + N E++ A+ +PI+ R +A L + IAV+G+HGK+TT
Sbjct: 82 -----AAAIVTSTAITKANPEVIAAQEKTIPIFHRSDMVAALMQAKYGIAVAGAHGKTTT 136
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A L+ G T +VG + F G+ G G++ V EADE DG FL SP +A+V
Sbjct: 137 TSMVAIALEHAGISPTVLVGGEL-DFLHGNAKLGTGEHLVAEADESDGSFLKFSPRIAIV 195
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN++ +H+D ++ + + F +FLK++ G V+C D+ R Q+ QD
Sbjct: 196 TNIENDHMDYYQTMENMLGAFSKFLKKLPSNGLAVLCFDNANVR----QVSQDL------ 245
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQ---GGSDYILCERGRPLAQI 372
D +I+YG D+ A+ N+ + + + +G L +
Sbjct: 246 ---------------DAPVISYGL----DYPADVTATNITSRGATTRFDVIFQGANLGTV 286
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC 432
LQ+PG HNVLNSLA IA L L + +SIA L F G RRF G + G
Sbjct: 287 ELQVPGRHNVLNSLAAIAVGLHL----GLAFQSIAA---GLLLFKGAKRRFQTKGRVDGV 339
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
I DD+AHHPTE+ L AAR P K LI +FQPH Y+R +L+ +F A AD +V+
Sbjct: 340 WIVDDYAHHPTEITTTLLAARDTDP-KRLICIFQPHRYTRTQLLRAEFGRAFYPADVLVL 398
Query: 493 SAV 495
+ +
Sbjct: 399 TDI 401
>gi|310830391|ref|YP_003965492.1| UDP-N-acetylmuramate--L-alanine ligase [Paenibacillus polymyxa SC2]
gi|309249858|gb|ADO59424.1| UDP-N-acetylmuramate--L-alanine ligase [Paenibacillus polymyxa SC2]
Length = 459
Score = 244 bits (623), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 147/420 (35%), Positives = 231/420 (55%), Gaps = 51/420 (12%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG G+SA+A++ L+ G+ V+GSD+ S E L GA ++IGH+ +I G D
Sbjct: 7 VHFIGIGGYGMSAIARVMLEMGYTVTGSDVASQSLTEKLAAKGAKIYIGHTPEHIAGAD- 65
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV S+A+ +DNVE + A+ + +P R LA+L + IAV+G+HGK+TT+S
Sbjct: 66 -----IVVYSTALSRDNVERVAAEELNIPTLHRSQMLARLLNERKGIAVAGAHGKTTTSS 120
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVT 256
M+A V++ D T I+G + G+ G FV+ EADE DG FL P +VT
Sbjct: 121 MIALVMERCNVDPTYIIGGEITNL--GTNAKAGKSEFVVAEADESDGSFLQYHPWQGIVT 178
Query: 257 NLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
N++ +H++ ++ D + +KS + +FL QI+ G ++C D Q + +L Q++
Sbjct: 179 NIEADHLENYDGDFNRLKSAYVQFLGQIQPDGAAIVCADDQNIQEMLPQLQT-------- 230
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS---DYILCERGRPLAQI 372
++ITYG D+ A ++Q G + + +G L I
Sbjct: 231 -----------------RVITYGIEHEADYMA----TDIQLGDRRLSFTMNRKGTALGTI 269
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC 432
L +PG HNV N++A + + L + E IA + +F G RRF +IG ++
Sbjct: 270 ELSVPGKHNVYNAMATVISCL----EAGIPFEQIAA---TIVEFHGAKRRFQVIGDLHDV 322
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+ DD+AHHPTE+ A LQAA+ K ++AVFQP Y+R L D F+ A S+AD+V++
Sbjct: 323 LVVDDYAHHPTEIIATLQAAKS--TGKRIVAVFQPQRYTRTYFLLDQFSRAFSDADEVII 380
>gi|337750684|ref|YP_004644846.1| protein MurC [Paenibacillus mucilaginosus KNP414]
gi|336301873|gb|AEI44976.1| MurC [Paenibacillus mucilaginosus KNP414]
Length = 459
Score = 244 bits (623), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 146/424 (34%), Positives = 229/424 (54%), Gaps = 43/424 (10%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
N IHF+GIGG G+SA+AK+ L+ G++VSGSDL E L GA + IGH N+
Sbjct: 2 NTSEHIHFIGIGGYGMSAIAKVMLEMGYQVSGSDLAQQELTEKLAAKGAQVFIGHEAENV 61
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
+G D VV S+A+ +DNVE+ A+ + +PI R LA+L IAV+G+HGK
Sbjct: 62 KGAD------VVVYSTALSKDNVEMAAAEELNIPILHRSQMLARLMNAKKGIAVAGAHGK 115
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+TT+SM+A VL+ G D T I+G + + G G V EADE DG FL P++
Sbjct: 116 TTTSSMIALVLEHCGSDPTFIIGGEIMNVGSNA-KAGKGDWVVAEADESDGSFLQYHPTI 174
Query: 253 AVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
A+V N++ +H++ + D + +K + +FL Q++ G V+C D ++ QI+ +
Sbjct: 175 ALVNNIEADHLENYNGDFENLKKAYAQFLSQVKADGKAVVCLDDAYLSGMIPQIQSE--- 231
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQ 371
+ITYG S D A ++ + S + + G+ L
Sbjct: 232 ----------------------VITYGIHSDADVTAHNIVLGDRKVS-FEVMRGGQLLGT 268
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG 431
ISL +PG HNV N++A + T + ++ + A + + +F G RRF ++G +
Sbjct: 269 ISLSVPGKHNVYNAMATLITCM-------EAGLTFAQVAEAIMEFRGAKRRFQVLGEVND 321
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+AHHPTE+ A + AA+ K +IAVFQP Y+R L + F+ A +AD+V+
Sbjct: 322 ILVIDDYAHHPTEIEATILAAKA--TGKRIIAVFQPQRYTRTYFLFEQFSRAFPDADEVI 379
Query: 492 VSAV 495
++ +
Sbjct: 380 ITDI 383
>gi|291523761|emb|CBK89348.1| UDP-N-acetylmuramate--L-alanine ligase [Eubacterium rectale DSM
17629]
Length = 459
Score = 244 bits (623), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 152/428 (35%), Positives = 226/428 (52%), Gaps = 41/428 (9%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DF ++ IHF+GIGG +S LA++ ++GF +SGSD S + L G + G S
Sbjct: 4 IDF-SKPIHIHFIGIGGISMSGLAEILHEEGFTISGSDSKESDLTKTLAAKGIKVIYGQS 62
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVS 187
NI + VV ++AI + N E AK+ G+P+ R L ++ + Y+ IAV+
Sbjct: 63 ADNITSG-----IDLVVYTAAIHESNPEFAAAKAAGIPMLTRAELLGQIMDNYDYSIAVA 117
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT SM++ +L A D T VG + G++ G + F+ EA EY FL
Sbjct: 118 GTHGKTTTTSMISEILLAAQTDPTISVGGILSSI-HGNLRVGDSEYFISEACEYTNSFLN 176
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P +++ N++ EH+D F+D + ++ FR + GG +I G+ ++ + Q
Sbjct: 177 FRPRYSIILNIEAEHLDFFKDINDIRHSFREYASNTLAGGATIINGEIDSYEEIVAGLPQ 236
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR 367
KIITYGF S D+Y E++ + + + + +G
Sbjct: 237 -------------------------KIITYGFDSKYDFYPENITYDDKACASFTAMRQGS 271
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
PL + L +PG HNV N+LA IA TL D+ ESI L KF G RRF G
Sbjct: 272 PLFDVKLSVPGAHNVSNALAAIALSTTLGLDE----ESILT---GLDKFGGADRRFQYKG 324
Query: 428 TIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ G I DD+AHHPTE+RA L AA Q++P+ L+ FQPHTYSR +DFA+ LS A
Sbjct: 325 KVNGVTIIDDYAHHPTEIRATLTAA-QKYPHDRLVLCFQPHTYSRTKAFLNDFADVLSMA 383
Query: 488 DQVVVSAV 495
D VV++ +
Sbjct: 384 DVVVLADI 391
>gi|386726486|ref|YP_006192812.1| UDP-N-acetylmuramate--L-alanine ligase [Paenibacillus mucilaginosus
K02]
gi|384093611|gb|AFH65047.1| UDP-N-acetylmuramate/alanine ligase [Paenibacillus mucilaginosus
K02]
Length = 459
Score = 244 bits (623), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 146/424 (34%), Positives = 228/424 (53%), Gaps = 43/424 (10%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
N IHF+GIGG G+SA+AK+ L+ G++VSGSDL E L GA + IGH N+
Sbjct: 2 NTSEHIHFIGIGGYGMSAIAKVMLEMGYQVSGSDLAQQELTEKLAAKGAQVFIGHEAENV 61
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
+G D VV S+A+ +DNVE+ A+ + +PI R LA+L IAV+G+HGK
Sbjct: 62 KGAD------VVVYSTALSKDNVEMAAAEELNIPILHRSQMLARLMNAKKGIAVAGAHGK 115
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+TT+SM+A VL+ G D T I+G + + G G V EADE DG FL P++
Sbjct: 116 TTTSSMIALVLEHCGSDPTFIIGGEIMNVGSNA-KAGKGDWVVAEADESDGSFLQYHPTI 174
Query: 253 AVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
A+V N++ +H++ + D + +K + +FL Q++ G V+C D ++ QI+ +
Sbjct: 175 ALVNNIEADHLENYNGDFENLKKAYAQFLSQVKADGKAVVCLDDAYLSGMIPQIQSE--- 231
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQ 371
+ITYG S D A ++ + S + + G L
Sbjct: 232 ----------------------VITYGIHSDADVTAHNIVLGDRKVS-FEVMRGGELLGT 268
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG 431
ISL +PG HNV N++A + T + ++ + A + + +F G RRF ++G +
Sbjct: 269 ISLSVPGKHNVYNAMATLITCM-------EAGLTFAQVAEAIKEFRGAKRRFQVLGEVND 321
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+AHHPTE+ A + AA+ K +IAVFQP Y+R L + F+ A +AD+V+
Sbjct: 322 ILVIDDYAHHPTEIEATILAAKA--TGKRIIAVFQPQRYTRTYFLFEQFSRAFPDADEVI 379
Query: 492 VSAV 495
++ +
Sbjct: 380 ITDI 383
>gi|192359638|ref|YP_001983384.1| UDP-N-acetylmuramate--L-alanine ligase [Cellvibrio japonicus
Ueda107]
gi|190685803|gb|ACE83481.1| UDP-N-acetylmuramate--alanine ligase [Cellvibrio japonicus Ueda107]
Length = 474
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 152/426 (35%), Positives = 228/426 (53%), Gaps = 50/426 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG+G+S +A++ L QG+E+SGSD+ SS E L++ GA + IGH SN+QG D
Sbjct: 19 IHFIGIGGAGMSGIAEVLLNQGYEISGSDIKASSVTERLVQKGARIFIGHDASNVQGAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSA+ N E++ A+ + +P+ +R L +L + IAV+G+HGK+TT S
Sbjct: 78 -----VVVNSSAVNNTNPEVVGARELRIPVVRRAEMLGELMRYRHGIAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+LA +L A D T I+G V + GG + V EADE D FL L P VA+VTN
Sbjct: 133 LLASILAAADLDPTFIIGGLVNSTGTNAQL-GGSRYLVAEADESDASFLHLQPMVAIVTN 191
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H++ + D +K F FL + G V+CG+ R ++ + +
Sbjct: 192 IDADHMETYGGDFSRLKKTFVEFLHNLPFYGLAVVCGEDPVIRDIIPDVAR--------- 242
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA-QISLQ 375
I+TYGF+ D+ A ++ + + S++ + G P I L
Sbjct: 243 ----------------PILTYGFNEHCDFRATNIRQD-KMSSEFDVLRPGNPEPLHIRLN 285
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESI--ACLKLPLSKFMGVSRRFDLIGTIY--- 430
IPG+HNVLN+ AVIA + E I + ++ L+ F GV RRF + G
Sbjct: 286 IPGIHNVLNATAVIAVA---------TDEGISDSAIQAGLANFQGVGRRFQVYGNFPVGD 336
Query: 431 -GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
+ DD+ HHP EV AV++A R +P + L+ V+QPH ++R L +DF LS D
Sbjct: 337 GSTMLVDDYGHHPREVAAVIKAVRDGWPERRLVMVYQPHRFTRTRDLYEDFVEVLSTVDA 396
Query: 490 VVVSAV 495
+V+ V
Sbjct: 397 LVMLEV 402
>gi|376296427|ref|YP_005167657.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfovibrio desulfuricans
ND132]
gi|323458988|gb|EGB14853.1| UDP-N-acetylmuramate/alanine ligase [Desulfovibrio desulfuricans
ND132]
Length = 483
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 144/430 (33%), Positives = 224/430 (52%), Gaps = 41/430 (9%)
Query: 66 ECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHI 125
E + R IH VGIGGSG++ +A++ + GF V+GSDL S+ + L + GA ++I
Sbjct: 13 EACPAMRARVNNIHMVGIGGSGMNGIAEVLINMGFNVTGSDLAASAAVRRLEKLGATVYI 72
Query: 126 GHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIA 185
GH N+ D ++ S+AIP N E++ A+ G+PI R LA+L IA
Sbjct: 73 GHGADNVGDAD------VLIKSTAIPDRNPELVAARERGIPIIPRAEMLAELMRLKTGIA 126
Query: 186 VSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCF 245
V+G+HGK+TT S+LA + G D T I+G + + + G G + EADE DG F
Sbjct: 127 VAGTHGKTTTTSLLATIFTEAGLDPTVIIGGRLNTY-GANARLGEGDYLIAEADESDGSF 185
Query: 246 LGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 305
L L+P + VVTN+D +H+D ++++DA+ F RF+ G V+CGD + + LL I
Sbjct: 186 LRLAPIITVVTNIDKDHMDFYDNQDAIDLSFMRFMNSTPFYGMNVVCGDDEGVQRLLPLI 245
Query: 306 KQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER 365
K+ +TYG N E V +++ S + +
Sbjct: 246 KR-------------------------PYLTYGLGKQNKLRGEIVSSHLR--SLFKVWLD 278
Query: 366 GRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
G ++++ PG HNVLN+LA I L + DK + + L F GV RRF+
Sbjct: 279 GEEWGEVTVAQPGTHNVLNALACIGVALEVGLDKEEIIQG-------LGNFGGVGRRFER 331
Query: 426 IGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
G G + DD+ HHP E+ A L+ A++ +P++ L+ FQPH +SR L +F A
Sbjct: 332 KGEKKGVIVVDDYGHHPAEIMANLRTAKECYPDRRLVVAFQPHRFSRTKALFGEFCKAFG 391
Query: 486 EADQVVVSAV 495
+AD ++++ +
Sbjct: 392 DADILLLTEI 401
>gi|427406105|ref|ZP_18896310.1| UDP-N-acetylmuramate-alanine ligase [Selenomonas sp. F0473]
gi|425708946|gb|EKU71985.1| UDP-N-acetylmuramate-alanine ligase [Selenomonas sp. F0473]
Length = 776
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 157/421 (37%), Positives = 220/421 (52%), Gaps = 46/421 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHI-GHSVSNIQGND 136
IHFVGIGG+G+S LAK+ L G+EVSGSD S +E L+ GA + G N++G D
Sbjct: 11 IHFVGIGGAGMSPLAKILLLLGYEVSGSDQGSSPIIEELVRLGAQVWTDGQHAENVRGAD 70
Query: 137 GSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
A+V S+AIP DN E++ A + +P R A L +Y+ IAV+GSHGK+TT
Sbjct: 71 ------AIVVSTAIPYDNPEVIAAWDLRIPKLHRSDINAALVNEYDGIAVAGSHGKTTTT 124
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM+ L G T +VG VP + G G+ V EADE DG FL L P +AVVT
Sbjct: 125 SMIGVTLDRAGISPTIVVGGEVPDLGTNAKL-GTGRYLVSEADESDGSFLKLRPHIAVVT 183
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D + + + FR F+ QI G V+C +++ R L
Sbjct: 184 NVEDDHMDHYGTMEKIVEAFRTFIAQIDADGTAVLCYENEILRRL--------------- 228
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS--DYILCERGRPLAQISL 374
G D +++Y D+ A + + GS + + ERG ++SL
Sbjct: 229 ----------GAETDRAVVSYAIDRDADYRAADIATH---GSVISFTVVERGTEAGRVSL 275
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHI 434
IPG HNVLN+LA IA R + + L+ F G RRF G G +
Sbjct: 276 NIPGRHNVLNALACIAVA-------RIAGLPFDRIADALAHFHGAKRRFQTKGKERGVWV 328
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSA 494
DD+AHHPTE+ A L AARQ P + LI VFQPH YSR +L+++F + AD ++++
Sbjct: 329 VDDYAHHPTEIAATLAAARQTAPVR-LICVFQPHRYSRTQLLREEFGACFAAADLLLLTD 387
Query: 495 V 495
V
Sbjct: 388 V 388
>gi|125975108|ref|YP_001039018.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium thermocellum
ATCC 27405]
gi|256003237|ref|ZP_05428229.1| UDP-N-acetylmuramate/alanine ligase [Clostridium thermocellum DSM
2360]
gi|281418473|ref|ZP_06249492.1| UDP-N-acetylmuramate/alanine ligase [Clostridium thermocellum JW20]
gi|385777594|ref|YP_005686759.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium thermocellum
DSM 1313]
gi|419722859|ref|ZP_14249996.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium thermocellum
AD2]
gi|419726359|ref|ZP_14253382.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium thermocellum
YS]
gi|189029009|sp|A3DIP6.1|MURC_CLOTH RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|125715333|gb|ABN53825.1| UDP-N-acetylmuramate/alanine ligase [Clostridium thermocellum ATCC
27405]
gi|255992928|gb|EEU03018.1| UDP-N-acetylmuramate/alanine ligase [Clostridium thermocellum DSM
2360]
gi|281407557|gb|EFB37816.1| UDP-N-acetylmuramate/alanine ligase [Clostridium thermocellum JW20]
gi|316939274|gb|ADU73308.1| UDP-N-acetylmuramate/alanine ligase [Clostridium thermocellum DSM
1313]
gi|380770411|gb|EIC04308.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium thermocellum
YS]
gi|380781239|gb|EIC10900.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium thermocellum
AD2]
Length = 469
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 146/426 (34%), Positives = 229/426 (53%), Gaps = 44/426 (10%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
N+ +HF+GIGG +S LA++ L GF VSGSD+ S+ L + G ++ GHS NI
Sbjct: 10 NKFKHVHFIGIGGISMSGLAEILLNLGFTVSGSDIRSSNITSKLEKKGIKIYTGHSEENI 69
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHG 191
+ D VV ++A+ DN E+ AKS+G+P R L ++ +KY +AVSG+HG
Sbjct: 70 KDAD------LVVYTAAVKSDNPELAKAKSLGIPTLDRATLLGEIMKKYPFSVAVSGTHG 123
Query: 192 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPS 251
K+TT SM++ ++ D T +G + G+ G K FV EA EY FL P
Sbjct: 124 KTTTTSMISLIMLKSALDPTIHIGGELDAI-GGNTRIGSNKYFVAEACEYVESFLKFHPY 182
Query: 252 VAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
+AVV N++ +H+D F+D + +K+ F +F++ + G++V C D Q S+L + +
Sbjct: 183 LAVVLNIEADHLDYFKDIEHIKNAFLKFIRLVPENGYVVACADDQNVLSILKDVHCN--- 239
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFND-WYAESVCPNVQGGSDYILCERGRPLA 370
IIT+G +S N W AE + N G + + + + +
Sbjct: 240 ----------------------IITFGLNSKNAMWTAEDISFNENGFAAFTVLKDNERIT 277
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
I L++PG+HN+ N+LA IA L SI +K L + G+ RRF+L G
Sbjct: 278 NIQLKVPGIHNISNALASIAACYAL-------GCSIENIKKGLESYTGIHRRFELKGIEN 330
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQ-RFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
+ DD+AHHP+E++A L+AAR +P + VFQPHTY+R L D+F+ A + D+
Sbjct: 331 NIKVVDDYAHHPSEIKATLKAARSGNYPR--IWTVFQPHTYTRTKFLLDEFSKAFKDTDK 388
Query: 490 VVVSAV 495
V+++ +
Sbjct: 389 VIITDI 394
>gi|388259732|ref|ZP_10136901.1| UDP-N-acetylmuramate--L-alanine ligase [Cellvibrio sp. BR]
gi|387936458|gb|EIK43020.1| UDP-N-acetylmuramate--L-alanine ligase [Cellvibrio sp. BR]
Length = 462
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 156/428 (36%), Positives = 229/428 (53%), Gaps = 46/428 (10%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG+G+S +A++ L QG+E+SGSD+ S+ E L GA ++IGH+ N+Q
Sbjct: 3 RIRRIHFVGIGGAGMSGIAEVLLNQGYEISGSDIKASNVTERLASKGATIYIGHAAQNVQ 62
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
G D VV SSA+ N EI A+ + +PI +R LA+L + IAV+G+HGK+
Sbjct: 63 GAD------VVVNSSAVNAQNPEIQGARELRIPIVRRAEMLAELMRYRHGIAVAGTHGKT 116
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S+LA VL A D T I+G V + G + V EADE D FL L P VA
Sbjct: 117 TTTSLLASVLAAAKLDPTFIIGGLVNSTGTNAQL-GASRYLVAEADESDASFLHLQPMVA 175
Query: 254 VVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
+VTN+D +H++ + D +K F FL + G V+CGD R ++ ++ +
Sbjct: 176 IVTNIDADHMETYGGDFSKLKKTFIEFLHNLPFYGLAVLCGDDPVVRDIIPEVAR----- 230
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA-Q 371
I+TYGF +D+ A ++ + + S++ + G A
Sbjct: 231 --------------------PILTYGFDENSDFRAINIRQD-KMHSEFDVVRPGHEKALH 269
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY- 430
I + IPG+HNVLN+ AVIA D+ S E+I + L F GV RRF + G
Sbjct: 270 IRINIPGIHNVLNATAVIAVAT----DEGISDEAI---QFGLENFQGVGRRFQVYGNFPV 322
Query: 431 ---GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ DD+ HHP EV AV++A R +P++ L+ ++QPH Y+R L +DF LS
Sbjct: 323 GEGDAMLVDDYGHHPREVAAVIRAVRDGWPDRRLVMIYQPHRYTRTRDLYEDFVEVLSTV 382
Query: 488 DQVVVSAV 495
D +++ V
Sbjct: 383 DALIMLEV 390
>gi|421858693|ref|ZP_16290956.1| UDP-N-acetylmuramate-alanine ligase [Paenibacillus popilliae ATCC
14706]
gi|410831762|dbj|GAC41393.1| UDP-N-acetylmuramate-alanine ligase [Paenibacillus popilliae ATCC
14706]
Length = 459
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 147/420 (35%), Positives = 229/420 (54%), Gaps = 45/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG G+SA+A++ L+ G+ VSGSD+ S L GA +HIGH+ ++ D
Sbjct: 7 IHFIGIGGYGMSAIARVLLQMGYTVSGSDVAASEATAKLQAQGATVHIGHAAGYVEDAD- 65
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
V S+A P DNVE + A G+P+ R LAKL +AV+G+HGK+TT+S
Sbjct: 66 -----IAVYSTACPGDNVERIAASLRGIPVLHRSQMLAKLLNAKKGVAVAGAHGKTTTSS 120
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVT 256
M+A+VL+ G D T I+G V G+ G FV+ EADE DG FL P + V+T
Sbjct: 121 MIAFVLERCGADPTYIIGGEVTNL--GTNARAGSCEFVVAEADESDGSFLAYHPYIPVIT 178
Query: 257 NLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
N++ +H++ ++ D + +K+ + +FL Q G V+C + RS+ ++
Sbjct: 179 NIEADHLENYDGDFERLKAAYVQFLSQRSPDGIAVLCAEDPILRSMAPRL---------- 228
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQ 375
GQG ++TYG ++ A+ + +G + + + RG L + L
Sbjct: 229 -----------GQG----VVTYGIDKAAEYTADDIQAEDRGMT-FRMRHRGETLGSVRLS 272
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
IPG HNVLN++A + + Q+ + +++F+G RRF +IG G +
Sbjct: 273 IPGRHNVLNAMATLIVAM-------QAGIAFERAAGAITEFIGAKRRFQVIGEEGGILVV 325
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHPTE+ A L AA+ + L+AVFQP YSR L + F+ A +EAD+++V+ +
Sbjct: 326 DDYAHHPTEIEATLVAAKA--TGRRLVAVFQPQRYSRTYFLFEQFSRAFTEADELIVTDI 383
>gi|297616982|ref|YP_003702141.1| UDP-N-acetylmuramate/alanine ligase [Syntrophothermus lipocalidus
DSM 12680]
gi|297144819|gb|ADI01576.1| UDP-N-acetylmuramate/alanine ligase [Syntrophothermus lipocalidus
DSM 12680]
Length = 461
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 158/421 (37%), Positives = 232/421 (55%), Gaps = 46/421 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH VGIGG+G+S +A + + G VSGSDL S + L E G ++ GH+ +G
Sbjct: 8 IHMVGIGGAGMSGIAVVLHEMGACVSGSDLRKSEVTKILEERGIKVYTGHA-------EG 60
Query: 138 SRFPNA--VVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
P VV SSAIP DN EI AK +G+P+ KR LA L+ KY IA++G+HGK+TT
Sbjct: 61 FLSPKTELVVVSSAIPPDNPEIQAAKRLGIPVIKRGEMLALLSNKYRGIAIAGAHGKTTT 120
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM++ VL+ G D T I+G + Q + G G+ FV EADE D FL L P VAVV
Sbjct: 121 TSMISLVLEDNGLDPTFIIGGQM-QRSLVNAKLGRGELFVAEADESDASFLRLHPHVAVV 179
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVI-CGDSQCARSLLDQIKQDTGLKYS 314
TN++ +H+D ++ E+ ++S F++F+ Q+ G V+ GD A GLK
Sbjct: 180 TNVEDDHLDYYQSEENIRSAFQQFVNQVLPEGFAVLFSGDRFLA-----------GLK-- 226
Query: 315 GGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISL 374
Q +++ YGF +D++ + G + C RG+ L + L
Sbjct: 227 -------------QKSRARLVYYGFDDNSDYFCREIRACGIGSAFKAYC-RGQMLGDVYL 272
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHI 434
++PG+HNVLN++A IA V +G + + L F+G RRF+++G + G +
Sbjct: 273 KVPGIHNVLNAMAAIA-VGCEVGVNFEG------ITRALGGFLGAKRRFEVVGKLNGITV 325
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSA 494
DD+AHHPTE++A + AARQ F LI +FQPH Y+R +L F A +D V+++
Sbjct: 326 IDDYAHHPTEIKATILAARQ-FHRSRLIVIFQPHRYTRTKLLGHQFGPAFQGSDMVIITD 384
Query: 495 V 495
V
Sbjct: 385 V 385
>gi|226323567|ref|ZP_03799085.1| hypothetical protein COPCOM_01342 [Coprococcus comes ATCC 27758]
gi|225208251|gb|EEG90605.1| UDP-N-acetylmuramate--L-alanine ligase [Coprococcus comes ATCC
27758]
Length = 470
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 156/428 (36%), Positives = 241/428 (56%), Gaps = 41/428 (9%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DF N+ IHF+GIGG +S LA++ L++GF VSGSD S+ + L + GA + G
Sbjct: 15 IDF-NQPCHIHFIGIGGISMSGLAEILLEEGFTVSGSDNKESALTDHLSQNGATVFYGQK 73
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVS 187
SNI DG VV ++AI +DN E AK +P+ R L +L Y +A+S
Sbjct: 74 ASNII--DGIDL---VVYTAAIHEDNEEFAEAKRRNLPMLSRAELLGQLMTNYKTPVAIS 128
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT SML+++ A D T VG + + +G+I GG F+ EA EY FL
Sbjct: 129 GTHGKTTTTSMLSHIALAANLDPTISVGG-ILKAIEGNIRVGGPDLFITEACEYTNSFLH 187
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
SP + ++ N+D +H+D F+D D +++ F F K + G LVI GD +D+I++
Sbjct: 188 FSPKIGIILNVDADHLDFFKDLDDIRNSFHLFAKLLPENGTLVINGD-------IDKIEE 240
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR 367
T SDL ++IT+G + D+ A ++ N QG + + + + G+
Sbjct: 241 IT-------------SDL-----SCRVITFGKEASLDYSAANITYNEQGNASFDVVKDGQ 282
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
+A ++L + G HNV N+LA IA V ++G ++ ++ L+ F G RRF+ G
Sbjct: 283 NVAHLALAVGGEHNVYNALAAIA-VADILGVPAET------IQTGLASFHGTDRRFEYKG 335
Query: 428 TIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ G I DD+AHHPTE+ A L++A +P+K L +FQPHTY+R L +FA AL+ A
Sbjct: 336 EVGGVTIIDDYAHHPTEIAATLKSAAH-YPHKKLWCIFQPHTYTRTKALFSEFAEALAHA 394
Query: 488 DQVVVSAV 495
D V+++ +
Sbjct: 395 DHVILADI 402
>gi|292669643|ref|ZP_06603069.1| UDP-N-acetylmuramate--L-alanine ligase [Selenomonas noxia ATCC
43541]
gi|292648440|gb|EFF66412.1| UDP-N-acetylmuramate--L-alanine ligase [Selenomonas noxia ATCC
43541]
Length = 779
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 158/430 (36%), Positives = 228/430 (53%), Gaps = 48/430 (11%)
Query: 71 FKNRKG--WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHI-GH 127
K+ KG IHF+GIGG+G+S LAK+ L G++VSGSD S +E L+ GA + G
Sbjct: 5 LKDLKGIHAIHFIGIGGAGMSPLAKILLLLGYQVSGSDQGTSPIIEELIRLGARIWTDGQ 64
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
N++G D A+V S+AIP DNVE++ A + +P R A L Y+ IAV+
Sbjct: 65 HAENVRGAD------AIVVSTAIPYDNVEVIAAWDLRIPKLHRSDINAALVNAYDGIAVA 118
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
GSHGK+TT SM+ L G T IVG VP + G G+ V EADE DG FL
Sbjct: 119 GSHGKTTTTSMIGVTLDCAGVSPTIIVGGEVPDLGTNAKL-GTGRYLVSEADESDGSFLK 177
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
L P +AVVTN++ +H+D + + + FR F+ Q G V+C +++ +L QI
Sbjct: 178 LRPHIAVVTNVEDDHMDHYGTMEKIIEAFRTFVDQTDADGTAVLCFENE----ILRQIAC 233
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS--DYILCER 365
+T ++++Y + D+ A + + GS + ER
Sbjct: 234 ET---------------------PCRVVSYAIDAEADYRAADMETH---GSVISFTAFER 269
Query: 366 GRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
G + ++ L IPG HNVLN+LA IA R + ++ L++F G RRF
Sbjct: 270 GAEMGRVLLNIPGRHNVLNALACIAVA-------RLAGVEFPEIRRALAQFHGAKRRFQT 322
Query: 426 IGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
G G + DD+AHHPTE+ A L AARQ P + LI VFQPH YSR +L+++F +
Sbjct: 323 KGKERGVWVVDDYAHHPTEIAATLAAARQTNPGR-LICVFQPHRYSRTQLLREEFGTCFA 381
Query: 486 EADQVVVSAV 495
AD ++++ V
Sbjct: 382 AADLLLLTDV 391
>gi|238922862|ref|YP_002936375.1| UDP-N-acetylmuramate--L-alanine ligase [Eubacterium rectale ATCC
33656]
gi|259509771|sp|C4ZBV1.1|MURC_EUBR3 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|238874534|gb|ACR74241.1| UDP-N-acetylmuramate--L-alanine ligase [Eubacterium rectale ATCC
33656]
Length = 459
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 152/428 (35%), Positives = 227/428 (53%), Gaps = 41/428 (9%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DF ++ IHF+GIGG +S LA++ ++GF +SGSD S + L G + G S
Sbjct: 4 IDF-SKPIHIHFIGIGGISMSGLAEILHEEGFTISGSDSKESDLTKTLAAKGIKVIYGQS 62
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVS 187
NI + + VV ++AI + N E AK+ G+P+ R L ++ + Y+ IAV+
Sbjct: 63 ADNI-----TTGIDLVVYTAAIHESNPEFAAAKAAGIPMLTRAELLGQIMDNYDYSIAVA 117
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT SM++ +L A D T VG + G++ G + F+ EA EY FL
Sbjct: 118 GTHGKTTTTSMISEILLAAQTDPTISVGGILSSI-HGNLRVGDSEYFISEACEYTNSFLN 176
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P +++ N++ EH+D F+D + ++ FR + GG +I G+ ++ + Q
Sbjct: 177 FRPRYSIILNIEAEHLDFFKDINDIRHSFREYASNTLAGGATIINGEIDRYEEIVAGLPQ 236
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR 367
KIITYGF S D+Y E++ + + + + +G
Sbjct: 237 -------------------------KIITYGFDSKYDFYPENITYDDKACASFTAMRQGS 271
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
PL + L +PG HNV N+LA IA TL D+ ESI L KF G RRF G
Sbjct: 272 PLFDVKLSVPGAHNVSNALAAIALSTTLGLDE----ESILT---GLDKFGGADRRFQYKG 324
Query: 428 TIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ G I DD+AHHPTE+RA L AA Q++P+ L+ FQPHTYSR +DFA+ LS A
Sbjct: 325 KVNGVTIIDDYAHHPTEIRATLTAA-QKYPHDRLVLCFQPHTYSRTKAFLNDFADVLSMA 383
Query: 488 DQVVVSAV 495
D VV++ +
Sbjct: 384 DVVVLADI 391
>gi|237756370|ref|ZP_04584917.1| UDP-N-acetylmuramate--alanine ligase [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237691467|gb|EEP60528.1| UDP-N-acetylmuramate--alanine ligase [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 456
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 152/431 (35%), Positives = 221/431 (51%), Gaps = 57/431 (13%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
F+ + IHF+GIGGSG++ +A+L L QG+ ++GSDL S +E L GA + IGHS
Sbjct: 2 FRGKVRKIHFIGIGGSGMNGIAELLLNQGYTITGSDLKESPTIERLRNLGAKIFIGHSEE 61
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N++ D VV SSA+ DN E++ AK +G+P R LA+L IA++GSH
Sbjct: 62 NVKDVD------VVVYSSAVKPDNPEMIKAKQLGIPTIPRGEMLAELMRFKYGIAIAGSH 115
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT SM+ VL G D T ++G + + + G G+ V E+DE DG FL L+P
Sbjct: 116 GKTTTTSMVGTVLGKTGFDPTVVIGGKLEAYGSNAKL-GRGEFLVTESDESDGSFLKLTP 174
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
++ + N+D EH+ ++D + +K F F ++ G + D + +S+L I++
Sbjct: 175 TIVSINNIDLEHIGFYKDLEDIKKAFVTFANKVPFYGAAAVNIDDENVKSILPYIER--- 231
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR--- 367
K+I +GFS D A + E GR
Sbjct: 232 ----------------------KVIKFGFSEDADIRAYD-----------LRLENGRYKF 258
Query: 368 ---PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFD 424
+I L +PG+HNV N+LA IA L + +K L F RRF+
Sbjct: 259 KVNDFGEIHLSVPGIHNVYNALATIAICNEL-------NVPFCVIKESLENFKNAKRRFE 311
Query: 425 LIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANAL 484
I I DD+AHHPTE++A L AAR F ++ +IAVFQPH YSRL VL ++FA A
Sbjct: 312 -IKYSNDIVIIDDYAHHPTELKATLSAARDYFKDRRIIAVFQPHRYSRLNVLFEEFAKAF 370
Query: 485 SEADQVVVSAV 495
D +V+ V
Sbjct: 371 DIPDITIVTEV 381
>gi|315645748|ref|ZP_07898872.1| UDP-N-acetylmuramate/alanine ligase [Paenibacillus vortex V453]
gi|315279226|gb|EFU42536.1| UDP-N-acetylmuramate/alanine ligase [Paenibacillus vortex V453]
Length = 458
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 146/433 (33%), Positives = 232/433 (53%), Gaps = 61/433 (14%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
N +HF+GIGG G+SA+A++ L+ G++V+GSD+ E L GA ++IGH+ +
Sbjct: 2 NTSEHVHFIGIGGYGMSAIARVMLEMGYKVTGSDVASQELTEKLAAKGAKIYIGHTAEQV 61
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
QG D VV S+A+ +DNVE + A+ + +P+ R LA+L + +AV+G+HGK
Sbjct: 62 QGAD------LVVYSTALSKDNVERVEAEKLNIPVLHRAQMLARLLNERKGVAVAGAHGK 115
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+TT+SM+A V++ G D T I+G + + G G++ V EADE DG FL P +
Sbjct: 116 TTTSSMIALVMEECGVDPTFIIGGEIMNVGTNA-KAGEGEHVVAEADESDGSFLQYHPWL 174
Query: 253 AVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
VV N++ +H++ +E D + +K+ + +FL QI+ G V+C D +++L +K +
Sbjct: 175 GVVLNIEADHLENYEGDFNRLKAAYVQFLSQIKPDGTAVVCADDHNIQAILPDLKCN--- 231
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQ 371
+ TYG S ++ A ++ + S +++ G L
Sbjct: 232 ----------------------VTTYGIHSDAEYTATNLVLGDRQVS-FMMLHNGMELGT 268
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLS---------KFMGVSRR 422
+ L +PG HNV N++A + I CLK +S KF G RR
Sbjct: 269 VELSVPGKHNVYNAMATV----------------ICCLKGGISFEAIVEAIVKFNGAKRR 312
Query: 423 FDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFAN 482
F ++G G + DD+AHHPTE+ A + AA+ K +IAVFQP YSR L D F+
Sbjct: 313 FQVLGEADGILVIDDYAHHPTEIEATISAAKA--TGKRIIAVFQPQRYSRTFFLLDAFSR 370
Query: 483 ALSEADQVVVSAV 495
A SEAD+V+++ +
Sbjct: 371 AFSEADEVIITDI 383
>gi|291528773|emb|CBK94359.1| UDP-N-acetylmuramate--L-alanine ligase [Eubacterium rectale M104/1]
Length = 459
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 152/428 (35%), Positives = 225/428 (52%), Gaps = 41/428 (9%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DF ++ IHF+GIGG +S LA++ ++GF +SGSD S + L G + G S
Sbjct: 4 IDF-SKPIHIHFIGIGGISMSGLAEILHEEGFTISGSDSKESDLTKTLAAKGIKVIYGQS 62
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVS 187
NI + VV ++AI + N E AK+ G+P+ R L ++ + Y+ IAV+
Sbjct: 63 ADNITSG-----IDLVVYTAAIHESNPEFAAAKAAGIPMLTRAELLGQIMDNYDYSIAVA 117
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT SM++ +L A D T VG + G++ G + F+ EA EY FL
Sbjct: 118 GTHGKTTTTSMISEILLAAQTDPTISVGGILSSI-HGNLRVGDSEYFISEACEYTNSFLN 176
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P +++ N++ EH+D F+D + ++ FR + GG +I G+ ++ + Q
Sbjct: 177 FRPRYSIILNIEAEHLDFFKDINDIRHSFREYASNTLAGGATIINGEIDRYEEIVAGLPQ 236
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR 367
KIITYGF S D+Y E++ + + + + +G
Sbjct: 237 -------------------------KIITYGFDSKYDFYPENITYDDKACASFTAMRQGS 271
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
PL + L +PG HNV N+LA IA TL D ESI L KF G RRF G
Sbjct: 272 PLFDVKLSVPGAHNVSNALAAIALSTTLGLDT----ESILT---GLDKFGGADRRFQYKG 324
Query: 428 TIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ G I DD+AHHPTE+RA L AA Q++P+ L+ FQPHTYSR +DFA+ LS A
Sbjct: 325 KVNGVTIIDDYAHHPTEIRATLTAA-QKYPHDRLVLCFQPHTYSRTKAFLNDFADVLSMA 383
Query: 488 DQVVVSAV 495
D VV++ +
Sbjct: 384 DVVVLADI 391
>gi|302669659|ref|YP_003829619.1| UDP-N-acetylmuramate-alanine ligase [Butyrivibrio proteoclasticus
B316]
gi|302394132|gb|ADL33037.1| UDP-N-acetylmuramate-alanine ligase MurC [Butyrivibrio
proteoclasticus B316]
Length = 464
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 155/430 (36%), Positives = 228/430 (53%), Gaps = 43/430 (10%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DFK ++F+GIGG +S LA++ +++ F++SGSD S L + G + G
Sbjct: 4 IDFKTPV-HVYFMGIGGISMSGLAQILIEENFKISGSDNKESDLTRSLEKKGVTIFYGQK 62
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVS 187
NI+ N G + VV ++A+ DN E + AK +P+ R L ++ ++Y L +AV+
Sbjct: 63 AENIR-NAGDI--DVVVYTAAVHPDNPEFMAAKEANLPMLTRAQLLGQIMKQYKLPVAVA 119
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPD--GSIFYGGGKNFVLEADEYDGCF 245
G+HGK+TT SML+ +L D T +G F D G+I G + FV EA EY F
Sbjct: 120 GTHGKTTTTSMLSKILLEADTDPTLSIGG---IFKDIGGNIRVGQSEYFVTEACEYTNSF 176
Query: 246 LGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 305
L P +++++N+D +H+D F+D D ++ FR+F + + G LVI GD + D +
Sbjct: 177 LSFFPKISIISNIDADHLDFFKDLDDIRHSFRKFAQLLPADGTLVINGDIDNVEEITDSL 236
Query: 306 KQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER 365
IITYG D+Y + N QG +
Sbjct: 237 P-------------------------CTIITYGSRDSFDYYPTDITYNEQGNPSFTAHLP 271
Query: 366 GRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
G ISL +PG+HNV N+LA IA V L G + + + LS F G SRRF+
Sbjct: 272 GGETLDISLAVPGIHNVYNALASIA-VANLFGISKDN------IVAALSAFGGTSRRFEY 324
Query: 426 IGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
G I G I DD+AHHPTE++A L AA Q +P+ + VFQPHTY+R L D+FA+ALS
Sbjct: 325 KGEIGGVTIIDDYAHHPTEIKATLTAA-QNYPHNKIWCVFQPHTYTRTKALLDEFADALS 383
Query: 486 EADQVVVSAV 495
AD VV++ +
Sbjct: 384 LADHVVLADI 393
>gi|308271441|emb|CBX28049.1| UDP-N-acetylmuramate--L-alanine ligase [uncultured Desulfobacterium
sp.]
Length = 459
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 160/420 (38%), Positives = 233/420 (55%), Gaps = 42/420 (10%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
+K IHFVGIGG G+S +A+L L G++VSGSD+ + + L G L+ GH SNI
Sbjct: 4 KKYHIHFVGIGGIGMSGIAELLLNLGYKVSGSDMASTDITDRLKRLGGLLYKGHHESNID 63
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
G D VV SSA+ +N E++ A V VP+ R LA+L IAV+G+HGK+
Sbjct: 64 GAD------VVVVSSAVSPENPEVVAAAQVSVPVIPRAEMLAELMRLKYSIAVAGAHGKT 117
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S++A VL G D T ++G + D + G G V EADE DG FL SP++A
Sbjct: 118 TTTSIVASVLAKGGLDPTVVIGGKLKSI-DSNALLGQGNYIVAEADESDGSFLKYSPAIA 176
Query: 254 VVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 313
VVTN+D EH+D + + DA+K +F F+ +I G V+C D++ + ++ +IK+
Sbjct: 177 VVTNIDKEHLDFYSNIDAIKDVFLNFIDRIPFYGLAVLCLDNEYVQDIIPKIKK------ 230
Query: 314 SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG-SDYILCERGRPLAQI 372
+ TYG SS + A++V +++G S + +C G L +I
Sbjct: 231 -------------------RFTTYGMSSQAVFQAKNV--SIEGLISKFKVCYNGNTLGEI 269
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC 432
SL +PG+HNV NSLA IA + L +K L GV RR ++ G + G
Sbjct: 270 SLNLPGIHNVYNSLASIAVGMEL-------DIPFDIIKEALENMQGVQRRLEIKGEVRGI 322
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+ DD+ HHPTE+R LQAA+ +P++ +I VFQPH YSR L DDF A ++D +++
Sbjct: 323 TVVDDYGHHPTEIRTTLQAAKDCWPDRRVIVVFQPHRYSRTKALFDDFTRAFYQSDHLII 382
>gi|297545530|ref|YP_003677832.1| UDP-N-acetylmuramate/alanine ligase [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296843305|gb|ADH61821.1| UDP-N-acetylmuramate/alanine ligase [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 464
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 144/420 (34%), Positives = 230/420 (54%), Gaps = 43/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG +S LA + L G V+GSD+ S +E L + GA + I H+ +++ G D
Sbjct: 11 VHFIGIGGISMSGLAHILLNNGHAVTGSDIKNSHIIEKLRQEGAVITIPHNENSVIGAD- 69
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTTA 196
VV ++AI +DN E AK + +P R L + +KY IAVSGSHGK+TT
Sbjct: 70 -----LVVYTAAIHEDNPEYQKAKELNIPTIDRATLLGLIMKKYKYGIAVSGSHGKTTTT 124
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
S+++ + MG D T +VG V G++ G + FV EA EY FL P +AV+
Sbjct: 125 SLISVIFNGMGYDPTVLVGGEVDVIG-GNVRVGNSEYFVTEACEYTDSFLKFYPYIAVIL 183
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N+D +H+D F++ D +K FR+F + G++V C D +++ + ++
Sbjct: 184 NVDSDHLDYFKNIDNIKQSFRQFASLVPPDGYVVACKDDANTMYVVNGLNKN-------- 235
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
I+TYG +DW A+++ + +G + + + + + L I
Sbjct: 236 -----------------IVTYGIYKDSDWKAKNIGFDDKGCAIFDVYYKEEYMGNFKLSI 278
Query: 377 PGVHNVLNSLAVIA-TVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
PG HNV N+LA +A + L I K+ SH L++F G RRF++ G + G I
Sbjct: 279 PGKHNVYNALAALAVSHLVGIDIKKASHY--------LTEFKGTHRRFEIKGIVDGITIV 330
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHP E++A L+AA+ +P+K +I +FQPHTYSR L ++FA + AD+++++ +
Sbjct: 331 DDYAHHPAEIKATLEAAKN-YPHKRIICIFQPHTYSRTKALLNEFAESFDNADKIIIADI 389
>gi|312136106|ref|YP_004003444.1| udp-n-acetylmuramate/alanine ligase [Caldicellulosiruptor
owensensis OL]
gi|311776157|gb|ADQ05644.1| UDP-N-acetylmuramate/alanine ligase [Caldicellulosiruptor
owensensis OL]
Length = 455
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 148/417 (35%), Positives = 238/417 (57%), Gaps = 41/417 (9%)
Query: 80 FVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSR 139
F+GIGG +SA+A + QGF V GSD+ S+ + L E G N++IGH S++ G++
Sbjct: 6 FIGIGGISMSAIALILKNQGFLVEGSDMQESTTTKMLRENGINVYIGHDESHLNGDE--- 62
Query: 140 FPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKSTTASM 198
V+ ++AI +DN E+L AK + + IY+R +L L + + N+IA+SG+HGK+TT SM
Sbjct: 63 ---TVIYTAAISKDNPELLAAKRMNLKIYERAEFLGLLMKDFKNVIAISGTHGKTTTTSM 119
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
+ Y+LK + T +VGA V Q G+ G + V+EA EY FL +P++ V+ N+
Sbjct: 120 IGYILKKANYNPTVLVGAFVKQLG-GNFVIGSKEYLVVEACEYVDSFLKFNPTIGVILNI 178
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVV 318
D +H+D F+D D++K+ F++F ++I G L+ D + + ++ ++ +
Sbjct: 179 DNDHLDYFKDIDSIKNSFKKFAQKIPASGFLIANCDDKNVKDIISELNTQIIC-----IS 233
Query: 319 SNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPG 378
+ + +D++ S +D Y E +V+ +D I LA I L IPG
Sbjct: 234 TKEKTDIFADN----------ISCSDGYYEF---DVKNNNDKI-------LAHIKLNIPG 273
Query: 379 VHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDF 438
HNV N+LA A L ESI ++ +++F G SRR + G G +YDD+
Sbjct: 274 FHNVYNALAAFAVASKL------GVESIT-IEHAIAEFCGASRRLEKAGEFDGICLYDDY 326
Query: 439 AHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
AHHPTE++A L ++ K + A+FQPHT+SRL L ++FA +LS AD+V+++ V
Sbjct: 327 AHHPTEIKASLNTLKKLSQGK-VFAIFQPHTFSRLKNLLNEFAESLSLADKVIITDV 382
>gi|261405378|ref|YP_003241619.1| UDP-N-acetylmuramate/alanine ligase [Paenibacillus sp. Y412MC10]
gi|261281841|gb|ACX63812.1| UDP-N-acetylmuramate/alanine ligase [Paenibacillus sp. Y412MC10]
Length = 458
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 142/424 (33%), Positives = 230/424 (54%), Gaps = 43/424 (10%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
N +HF+GIGG G+SA+A++ L+ G++V+GSD+ E L GA ++IGH+ +
Sbjct: 2 NTSEHVHFIGIGGYGMSAIARVMLEMGYKVTGSDVASQELTEKLAAKGAKIYIGHTAEQV 61
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
QG D VV S+A+ +DNVE + A+ + +P+ R LA+L + +AV+G+HGK
Sbjct: 62 QGAD------LVVYSTALSKDNVERVEAEKLNIPVLHRAQMLARLLNERKGVAVAGAHGK 115
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+TT+SM+A V++ G D T I+G + + G G++ V EADE DG FL P +
Sbjct: 116 TTTSSMIALVMEECGVDPTFIIGGEIMNVGTNA-KAGEGEHVVAEADESDGSFLQYHPWL 174
Query: 253 AVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
VV N++ +H++ +E D + +K+ + +FL QI+ G V+C D +++L +K +
Sbjct: 175 GVVLNIEADHLENYEGDFNRLKAAYVQFLSQIKADGTAVVCADDNNIQAILPDLKCN--- 231
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQ 371
+ TYG + ++ A ++ + S + + G L
Sbjct: 232 ----------------------VTTYGIHADAEYTATNLVLGDRHVS-FTMLHNGMELGT 268
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG 431
+ L +PG HNV N++A + L +S S + + KF G RRF ++G G
Sbjct: 269 VELSVPGKHNVYNAMATVICCL-------KSGISFGAIVEAIVKFNGAKRRFQVLGEAEG 321
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+AHHPTE+ A + AA+ K +IAVFQP YSR L D F+ A EAD+V+
Sbjct: 322 ILVIDDYAHHPTEIEATISAAKA--TGKRIIAVFQPQRYSRTFFLLDAFSRAFGEADEVI 379
Query: 492 VSAV 495
++ +
Sbjct: 380 ITDI 383
>gi|444914632|ref|ZP_21234774.1| UDP-N-acetylmuramate--alanine ligase [Cystobacter fuscus DSM 2262]
gi|444714491|gb|ELW55372.1| UDP-N-acetylmuramate--alanine ligase [Cystobacter fuscus DSM 2262]
Length = 476
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 154/427 (36%), Positives = 227/427 (53%), Gaps = 44/427 (10%)
Query: 71 FKNRKG-WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSV 129
FK R +HFVG+GG G+S +A++ L G+ VSGSDL S L + GA GH
Sbjct: 13 FKTRHAAHVHFVGVGGIGMSGIAEVLLNLGYRVSGSDLKASDITRRLAQLGATFFEGHRA 72
Query: 130 SNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGS 189
N+ D VV SSA+ +DN E++ A+ +P+ R LA+L +AV+GS
Sbjct: 73 ENLVHAD------VVVISSAVRKDNPEVVSARQRKIPVIPRAEMLAELMRLKYAVAVAGS 126
Query: 190 HGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLS 249
HGK+TT SM+A VL A G D TA+VG V D + G + V+EADE DG FL L
Sbjct: 127 HGKTTTTSMVATVLSAAGLDPTAVVGGKV-NVLDSNAKLGKSELMVVEADESDGSFLHLH 185
Query: 250 PSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
PS+++VTN+D EH+D + D +K F F ++ G V+C D+ +SLL ++++
Sbjct: 186 PSISIVTNIDPEHMDHYGTLDNLKDAFTSFCNRVPFYGLNVLCLDNPNVQSLLPRMEK-- 243
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRP 368
+ +TYG S D+ E V ++G + + R P
Sbjct: 244 -----------------------RFVTYGSSHMADYRLEGV--RLEGFSTRFEAFRRDEP 278
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
L + +++ G HN LN+LAVIA + + ++ L++F GV RRF +
Sbjct: 279 LGEFRVRMVGAHNALNALAVIAAA-------EEMDVPLDVVRGALAEFGGVQRRFTVRAE 331
Query: 429 IYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
+ G I DD+ HHPTEV+A L AR+ F + L+ FQPH Y+R L DFA + +++D
Sbjct: 332 VAGVTIVDDYGHHPTEVQATLAGARRAF-GRRLVVAFQPHRYTRTHDLFTDFATSFNDSD 390
Query: 489 QVVVSAV 495
+ VS+V
Sbjct: 391 VLFVSSV 397
>gi|289579389|ref|YP_003478016.1| UDP-N-acetylmuramate/alanine ligase [Thermoanaerobacter italicus
Ab9]
gi|289529102|gb|ADD03454.1| UDP-N-acetylmuramate/alanine ligase [Thermoanaerobacter italicus
Ab9]
Length = 464
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 144/420 (34%), Positives = 230/420 (54%), Gaps = 43/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG +S LA + L G V+GSD+ S +E L + GA + I H+ +++ G D
Sbjct: 11 VHFIGIGGISMSGLAHILLNNGHAVTGSDIKNSHIIEKLRQEGAVITIPHNENSVIGAD- 69
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTTA 196
VV ++AI +DN E AK + +P R L + +KY IAVSGSHGK+TT
Sbjct: 70 -----LVVYTAAIHEDNPEYQKAKELNIPTIDRATLLGLIMKKYKYGIAVSGSHGKTTTT 124
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
S+++ + MG D T +VG V G++ G + FV EA EY FL P +AV+
Sbjct: 125 SLISVIFDGMGYDPTVLVGGEVDVIG-GNVRVGNSEYFVTEACEYTDSFLKFYPYIAVIL 183
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N+D +H+D F++ D +K FR+F + G++V C D +++ + ++
Sbjct: 184 NVDSDHLDYFKNIDNIKQSFRQFASLVPPDGYVVACKDDANTMYVVNGLNKN-------- 235
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
I+TYG +DW A+++ + +G + + + + + L I
Sbjct: 236 -----------------IVTYGIYEDSDWKAKNIRFDDKGCAIFDVYYKEEYMGNFKLSI 278
Query: 377 PGVHNVLNSLAVIA-TVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
PG HNV N+LA +A + L I K+ SH L++F G RRF++ G + G I
Sbjct: 279 PGKHNVYNALAALAVSHLVGIDIKKASHY--------LTEFKGTHRRFEIKGIVDGITIV 330
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHP E++A L+AA+ +P+K +I +FQPHTYSR L ++FA + AD+++++ +
Sbjct: 331 DDYAHHPAEIKATLEAAKN-YPHKRIICIFQPHTYSRTKALLNEFAESFDNADKIIIADI 389
>gi|333896001|ref|YP_004469875.1| UDP-N-acetylmuramate--L-alanine ligase [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333111266|gb|AEF16203.1| UDP-N-acetylmuramate--L-alanine ligase [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 465
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 145/429 (33%), Positives = 232/429 (54%), Gaps = 42/429 (9%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+D +N K +HF+GIGG +S LA + L G V+GSD+ S ++ L GA ++I H
Sbjct: 2 IIDIENFK-RVHFIGIGGISMSGLAHIMLNSGHIVTGSDIKDSHIIKKLRNEGAIINIPH 60
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAV 186
S SN+ G D VV ++A+ +DN E++ A+ + +P R L ++ +KY + V
Sbjct: 61 SASNVDGAD------LVVYTAAVKEDNPEMIRARELNIPTIDRATLLGEIMKKYTYGVGV 114
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
+GSHGK+TT S+++ +L+ M D T +VG V G++ G + F+ EA EY FL
Sbjct: 115 AGSHGKTTTTSLISVLLEEMNYDPTVLVGGEV-DIIGGNVRVGNSEYFITEACEYTDSFL 173
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 306
P +AV+ N+D +H+D F++ D +K F +F + G +V CGD S+L +
Sbjct: 174 KFYPYIAVILNVDSDHLDYFKNIDNIKQSFTQFANLVPNDGFVVACGDDPNTMSVLKNVN 233
Query: 307 QDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERG 366
++ IIT+G S W A+++ + +G + + G
Sbjct: 234 RN-------------------------IITFGLDSNCTWNAKNIKFDEKGFPSFDVYHNG 268
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
+ + L I G HN+LN+LA ++ L D +++ + I KF G RRF+
Sbjct: 269 TFVERFELSIVGKHNILNALATLSVCHLLGVDIKKTPDII-------KKFKGTHRRFEFK 321
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
GTI G I DD+AHHPTE++A L +A +P+ +I VFQPHTY+R L +DFA + +
Sbjct: 322 GTIDGAVIIDDYAHHPTEIKATLSSALN-YPHNRIICVFQPHTYTRTYSLLNDFAASFDD 380
Query: 487 ADQVVVSAV 495
AD +++ +
Sbjct: 381 ADITIITDI 389
>gi|167039242|ref|YP_001662227.1| UDP-N-acetylmuramate--L-alanine ligase [Thermoanaerobacter sp.
X514]
gi|300913882|ref|ZP_07131199.1| UDP-N-acetylmuramate/alanine ligase [Thermoanaerobacter sp. X561]
gi|307725433|ref|YP_003905184.1| UDP-N-acetylmuramate/alanine ligase [Thermoanaerobacter sp. X513]
gi|166853482|gb|ABY91891.1| UDP-N-acetylmuramate--alanine ligase [Thermoanaerobacter sp. X514]
gi|300890567|gb|EFK85712.1| UDP-N-acetylmuramate/alanine ligase [Thermoanaerobacter sp. X561]
gi|307582494|gb|ADN55893.1| UDP-N-acetylmuramate/alanine ligase [Thermoanaerobacter sp. X513]
Length = 464
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 146/420 (34%), Positives = 230/420 (54%), Gaps = 43/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG +S LA + L G V+GSD+ S +E L + GA + I H+ +++ G D
Sbjct: 11 VHFIGIGGISMSGLAHILLNNGHIVTGSDIKNSHIIERLRQEGAVITIPHNENSVIGAD- 69
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTTA 196
VV ++AI +DN E AK + +P R L + +KY IAV+GSHGK+TT
Sbjct: 70 -----LVVYTAAIHEDNPEYQKAKELNIPTIDRATLLGLIMKKYKYGIAVAGSHGKTTTT 124
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
S+++ +L MG D T +VG V G++ G + FV EA EY FL P +AV+
Sbjct: 125 SLISVILDGMGFDPTVLVGGEVDVIG-GNVKVGNSEYFVTEACEYTDSFLKFYPYIAVIL 183
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N+D +H+D F++ D +K FR+F + G +V C D +++ + ++
Sbjct: 184 NVDSDHLDYFKNIDNIKQSFRQFANLVPPDGFVVACKDDANTMYVVNGLNKN-------- 235
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
I+TYG +DW A+S+ + +G + + + + + L I
Sbjct: 236 -----------------IVTYGIYQDSDWKAKSISFDDKGCAIFDVYYKEEYMGNFKLSI 278
Query: 377 PGVHNVLNSLAVIA-TVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
PG HNV N+LA +A + L I K+ SH L++F G RRF++ G + G I
Sbjct: 279 PGKHNVYNALAALAVSHLVGIDIKKASHY--------LTEFKGTHRRFEVKGIVDGITIV 330
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHP E++A L+AA+ +P+K +I +FQPHTYSR L +DFA + AD+++++ +
Sbjct: 331 DDYAHHPAEIKATLEAAKN-YPHKRIICIFQPHTYSRTKSLLNDFAESFDNADKIIIADI 389
>gi|329928513|ref|ZP_08282381.1| UDP-N-acetylmuramate--L-alanine ligase [Paenibacillus sp. HGF5]
gi|328937772|gb|EGG34180.1| UDP-N-acetylmuramate--L-alanine ligase [Paenibacillus sp. HGF5]
Length = 458
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 142/424 (33%), Positives = 230/424 (54%), Gaps = 43/424 (10%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
N +HF+GIGG G+SA+A++ L+ G++V+GSD+ E L GA ++IGH+ +
Sbjct: 2 NTSEHVHFIGIGGYGMSAIARVMLEMGYKVTGSDVASQELTEKLAAKGAKIYIGHTAEQV 61
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
QG D VV S+A+ +DNVE + A+ + +P+ R LA+L + +AV+G+HGK
Sbjct: 62 QGAD------LVVYSTALSKDNVERVEAEKLNIPVLHRAQMLARLLNERKGVAVAGAHGK 115
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+TT+SM+A V++ G D T I+G + + G G++ V EADE DG FL P +
Sbjct: 116 TTTSSMIALVMEECGVDPTFIIGGEIMNVGTNA-KAGEGEHVVAEADESDGSFLQYHPWL 174
Query: 253 AVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
VV N++ +H++ +E D + +K+ + +FL QI+ G V+C D +++L +K +
Sbjct: 175 GVVLNIEADHLENYEGDFNRLKAAYVQFLSQIKADGTAVVCADDNNIQAILPDLKCN--- 231
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQ 371
+ TYG + ++ A ++ + S + + G L
Sbjct: 232 ----------------------VTTYGIHADAEYTATNLVLGDRHVS-FTMLHNGMELGT 268
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG 431
+ L +PG HNV N++A + L +S S + + KF G RRF ++G G
Sbjct: 269 VELSVPGKHNVYNAMATVICCL-------KSGISFEAIVEAIVKFNGAKRRFQVLGEAEG 321
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+AHHPTE+ A + AA+ K +IAVFQP YSR L D F+ A EAD+V+
Sbjct: 322 ILVIDDYAHHPTEIEATISAAKA--TGKRIIAVFQPQRYSRTFFLLDAFSRAFGEADEVI 379
Query: 492 VSAV 495
++ +
Sbjct: 380 ITDI 383
>gi|436840230|ref|YP_007324608.1| UDP-N-acetylmuramate:L-alanine ligase [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
gi|432169136|emb|CCO22502.1| UDP-N-acetylmuramate:L-alanine ligase [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
Length = 489
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 149/425 (35%), Positives = 226/425 (53%), Gaps = 41/425 (9%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
++R G IH +GIGGSG+S +A++ + GF V+GSDL + ++ LL+ GA + IGH
Sbjct: 20 MRSRVGNIHMIGIGGSGMSGIAEVLINMGFTVTGSDLAAGAPVKRLLKMGAQVFIGHGGD 79
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N+ G D VV S+AI ++N E++ A+ +G+PI R LA+L IAV+G+H
Sbjct: 80 NVSGAD------VVVKSTAISENNPEVVKARELGIPIIPRAEMLAELMRLRTGIAVAGTH 133
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S+LA + D T I+G + F + G G+ + EADE DG FL LSP
Sbjct: 134 GKTTTTSLLATIFTEAELDPTVIIGGRLNTFGSNARL-GDGQYLIAEADESDGSFLCLSP 192
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
+ +VTN+D +H+D ++D+DA+ FR+F+ I G ++CGD + + LL IK+
Sbjct: 193 IITIVTNVDKDHMDFYDDQDAIDESFRKFMNSIPFYGMNIVCGDDKGVKRLLPSIKR--- 249
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
+TYG N AE + V+ L + L
Sbjct: 250 ----------------------PCMTYGLEKSNRLRAEILSCEVRSLFKVFLDD--ELLG 285
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
++SL PG HNVLN+L I L DK+ LS FMGV RRF+ G
Sbjct: 286 EVSLAQPGKHNVLNALGAIGVALEAGIDKKAILSG-------LSNFMGVGRRFEKKGECK 338
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
G + DD+ HHP E++A ++ A+ FP + L+ FQPH ++R L +F AD++
Sbjct: 339 GVMVVDDYGHHPAEIQATIETAKSCFPGRRLVVAFQPHRFTRTQALFGEFCKTFELADEL 398
Query: 491 VVSAV 495
+++ +
Sbjct: 399 LLTEI 403
>gi|337288497|ref|YP_004627969.1| UDP-N-acetylmuramate--L-alanine ligase [Thermodesulfobacterium sp.
OPB45]
gi|334902235|gb|AEH23041.1| UDP-N-acetylmuramate--L-alanine ligase [Thermodesulfobacterium
geofontis OPF15]
Length = 464
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 153/428 (35%), Positives = 225/428 (52%), Gaps = 50/428 (11%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
+ K IHF+GIGG G+S LA + G+EV G D+ S Y + L + G ++ HS S++
Sbjct: 2 SHKKKIHFIGIGGVGMSGLALIMHSLGYEVDGCDIAKSKYTKLLEKRGIKVYYQHSPSHL 61
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHG 191
D VV SSAI QDN E+L AK +G+ + R L+++ Y I V+GSHG
Sbjct: 62 DSVD------IVVYSSAISQDNPELLKAKELGIWVIPRAQMLSEVMNLYPKNIVVAGSHG 115
Query: 192 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPS 251
K+TT SM+A +L +G + T +VG + F S+ G + V EADE DG FL +P
Sbjct: 116 KTTTTSMIAEILIKLGKNPTVVVGGIINNFKTHSLL-GEREFLVAEADESDGSFLCYNPY 174
Query: 252 VAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
+ V+TN+D EH+D + D +A+K F F+K+ G +++CGD + +L +I
Sbjct: 175 IEVITNIDKEHLDFYADFNAIKKAFINFIKRCSPEGKVILCGDDLGVKEILKEI------ 228
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYA----ESVCPNVQGGSDYILCERGR 367
SG + YGFS N +S P V+ Y L +
Sbjct: 229 --SG-----------------PFLLYGFSKENHLVGKIVEDSAYPKVEV---YYL---DK 263
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
PL+ L +PG HN LN+LA I L L + I+ + L F GV RR D G
Sbjct: 264 PLSSFKLSVPGKHNALNALAAIGVSLIL-------NLPISEVIKILENFKGVERRLDFKG 316
Query: 428 TIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
G + DD+AHHPTE++A L ++ +PNK L+ VFQPH Y+R+ L D+F L E
Sbjct: 317 IWRGAILLDDYAHHPTEIKATLSTIKEVYPNKKLVLVFQPHRYTRMKALWDEFLLVLKEP 376
Query: 488 DQVVVSAV 495
+ ++++ +
Sbjct: 377 EILILTDI 384
>gi|375309913|ref|ZP_09775191.1| UDP-N-acetylmuramate--L-alanine ligase
(UDP-N-acetylmuramoyl-L-alanine synthetase)
[Paenibacillus sp. Aloe-11]
gi|375077866|gb|EHS56096.1| UDP-N-acetylmuramate--L-alanine ligase
(UDP-N-acetylmuramoyl-L-alanine synthetase)
[Paenibacillus sp. Aloe-11]
Length = 459
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 146/423 (34%), Positives = 230/423 (54%), Gaps = 51/423 (12%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG G+SA+A++ L+ G+ V+GSD+ E L GA ++IGH+ +I G D
Sbjct: 7 VHFIGIGGYGMSAIARVMLEMGYTVTGSDVASQELTEKLAAKGAKIYIGHTPEHIAGAD- 65
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV S+A+ +DNVE + A+ + +P R LA+L + +AV+G+HGK+TT+S
Sbjct: 66 -----IVVYSTALSRDNVERVAAEELNIPTLHRSQMLARLLNERKGVAVAGAHGKTTTSS 120
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVT 256
M+A V++ D T I+G + G+ G FV+ EADE DG FL P +VT
Sbjct: 121 MIALVMERCNVDPTYIIGGEITNL--GTNAKAGKSEFVVAEADESDGSFLQYHPWQGIVT 178
Query: 257 NLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
N++ +H++ ++ D + +KS + +FL QIR G ++CGD Q R ++ Q++
Sbjct: 179 NIEADHLENYDGDFNRLKSAYVQFLSQIRPDGAAIVCGDDQNIREMIPQLQT-------- 230
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS---DYILCERGRPLAQI 372
++ITYG D+ A ++Q G + + +G L I
Sbjct: 231 -----------------RVITYGVEHEADYMA----TDIQLGDRRLSFTMSRKGTELGTI 269
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC 432
L +PG HN+ N++A + + L + + IA L +F G RRF ++G
Sbjct: 270 ELSVPGRHNMYNAMATVISCL----EAGIPFDQIAASIL---EFHGAKRRFQVLGESNDI 322
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+ DD+AHHPTE+ A + AAR K +IAVFQP YSR L D F+ A SEA++V++
Sbjct: 323 LVIDDYAHHPTEIEATISAARA--TGKRIIAVFQPQRYSRTFFLLDAFSRAFSEANEVII 380
Query: 493 SAV 495
+ +
Sbjct: 381 TDI 383
>gi|336422356|ref|ZP_08602506.1| UDP-N-acetylmuramate-L-alanine ligase [Lachnospiraceae bacterium
5_1_57FAA]
gi|336008935|gb|EGN38938.1| UDP-N-acetylmuramate-L-alanine ligase [Lachnospiraceae bacterium
5_1_57FAA]
Length = 459
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 159/420 (37%), Positives = 234/420 (55%), Gaps = 42/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI-QGND 136
+HF+GIGG +S LA++ LK+GF +SGSD S+ L + GA + G SNI +G D
Sbjct: 12 VHFIGIGGISMSGLAEILLKEGFAISGSDNKESALTSHLKQQGATIFYGQKASNIIEGID 71
Query: 137 GSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTT 195
VV ++AI +DN E A G+P+ R L +L Y++ IA+SG+HGK+TT
Sbjct: 72 ------VVVYTAAIHEDNEEYAQALKKGLPMLSRAELLGQLMTNYDVPIAISGTHGKTTT 125
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SML+++L A D T VG + + G+I G + FV EA EY FL P ++V+
Sbjct: 126 TSMLSHILLAGEMDPTISVGG-ILKAIGGNIKVGKSELFVTEACEYTNSFLHFFPKISVI 184
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
N+D +H+D F+D D ++S F +F K + G L+I G+ +D++
Sbjct: 185 LNIDEDHLDFFKDLDDIRSSFHKFAKLLPKDGTLIINGN-------IDKL---------- 227
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQ 375
D +G D +II YG S D+ A ++ N G + + L + G + +ISL
Sbjct: 228 --------DCITKGLDCRIIKYGDDSSMDYSATNISHNKLGEASFDLVKAGVFVDRISLS 279
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
+ G HNV N+LA IA V L+G S+ +K L +F G +RRF+ G + G I
Sbjct: 280 VNGDHNVSNALAAIA-VSDLLG------VSLDKMKKGLKEFTGTNRRFEYKGEMDGVTII 332
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHPTE+ A L AA+ +P++ L VFQPHTY+R L +F AL+ AD VV+S +
Sbjct: 333 DDYAHHPTEINATLTAAK-YYPHRELWCVFQPHTYTRTKALFHEFVEALAHADHVVLSDI 391
>gi|336435405|ref|ZP_08615120.1| UDP-N-acetylmuramate-L-alanine ligase [Lachnospiraceae bacterium
1_4_56FAA]
gi|336000858|gb|EGN31004.1| UDP-N-acetylmuramate-L-alanine ligase [Lachnospiraceae bacterium
1_4_56FAA]
Length = 458
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 158/429 (36%), Positives = 232/429 (54%), Gaps = 41/429 (9%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DF N+ IHF+GIGG +S LA++ L++GF VSGSD S + L E GA++ G
Sbjct: 4 IDF-NKPIHIHFIGIGGISMSGLAEILLEEGFTVSGSDAKESPLTKKLEEMGAHIFYGQK 62
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVS 187
SNI DG + VV ++AI +DN E++ A + +P+ R L +L + Y+ IAVS
Sbjct: 63 ASNII--DGI---DCVVYTAAIRRDNAELIEAVAKKIPMLTRAELLGQLMKNYDTPIAVS 117
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT SM+++VL D T VG + + G+I G + F+ EA EY FL
Sbjct: 118 GTHGKTTTTSMISHVLLEADLDPTISVGG-ILKAIGGNIRVGKSETFITEACEYTNSFLN 176
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P + ++ N++ +H+D F+D + ++ F +F + G LVI G+ +D +
Sbjct: 177 FFPKIGIILNIEADHLDFFKDLEDIRHSFHQFAALLPDDGTLVINGE-------IDNYPE 229
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR 367
+ N G IITYGFS D+ AE++ + +G + + L R
Sbjct: 230 ----------IYN--------GLSCHIITYGFSKDFDYSAENIAFDEKGCASFDLLRRKE 271
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
P I+L +PG HNV N+LA IAT L + + L F G RRF+ G
Sbjct: 272 PAGHITLSVPGRHNVSNALASIATADLL-------EIPLETTRKGLLSFTGTDRRFEYKG 324
Query: 428 TIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
T G I DD+AHHPTE+ A LQAA+ +P+ L VFQPHTY+R +FA ALS A
Sbjct: 325 TKDGVIIIDDYAHHPTEIAATLQAAKH-YPHNELWCVFQPHTYTRTKAFFHEFAEALSHA 383
Query: 488 DQVVVSAVL 496
D +V++ +
Sbjct: 384 DHLVLADIF 392
>gi|334563693|ref|ZP_08516684.1| UDP-N-acetylmuramate--L-alanine ligase [Corynebacterium bovis DSM
20582]
Length = 504
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 160/422 (37%), Positives = 231/422 (54%), Gaps = 29/422 (6%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ--GN 135
+H VGIGG+G+S +A+L L +G VSGSD+ S + L AGA + GH N+ G
Sbjct: 20 VHMVGIGGAGMSGIARLLLDRGATVSGSDMKESRSILALRAAGAVVAEGHRAGNLTLAGA 79
Query: 136 DGSRFPNAVVAS-SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKST 194
+ P VV S +AIPQDN E++ A++ G+P+ +R LA L E + ++G+HGK++
Sbjct: 80 E----PTVVVTSFAAIPQDNPELVAARAAGIPVLRRSDVLALLMEDRRALLLAGTHGKTS 135
Query: 195 TASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGG-GKNFVLEADEYDGCFLGLSPSVA 253
T SM L+A G+D + +G + + G+ + G G FV EADE DG FL SP VA
Sbjct: 136 TTSMAVVALQAAGEDPSFAIGGQLNR--SGTNAHSGTGDVFVAEADESDGSFLSYSPDVA 193
Query: 254 VVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 313
VVT L+ +H+D F E+A + +FR F +IR GG LV+C D A +L + +
Sbjct: 194 VVTTLEPDHLDHFGTEEAYRRVFRDFAGRIRPGGTLVVCLDDDGAAALGEAVAAGEVPVA 253
Query: 314 SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQIS 373
G VS + + H + G + + + GGS ++ GR L +
Sbjct: 254 DGVTVSGYGTADGARRH--PGVPAG------AVVDRIVTDPAGGSGAVVTVDGRTL-DLR 304
Query: 374 LQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH 433
++IPG H VLN++A + + D + L + F GV RRF+ GT+ G
Sbjct: 305 VRIPGAHMVLNAVAAVLGGHLMGAD-------LEGLVSGIDTFDGVRRRFEHHGTVAGVE 357
Query: 434 IYDDFAHHPTEVRAVLQAARQRFPNKA---LIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+YDD+AHHPTEV AVL AAR R + ++AVFQPH YSR +FA+AL AD V
Sbjct: 358 VYDDYAHHPTEVTAVLSAARDRVTARGGGRVLAVFQPHLYSRTTTFAAEFAHALDLADDV 417
Query: 491 VV 492
V+
Sbjct: 418 VL 419
>gi|310643587|ref|YP_003948345.1| UDP-N-acetylmuramate--l-alanine ligase [Paenibacillus polymyxa SC2]
gi|309248537|gb|ADO58104.1| UDP-N-acetylmuramate--L-alanine ligase [Paenibacillus polymyxa SC2]
Length = 460
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 147/423 (34%), Positives = 229/423 (54%), Gaps = 51/423 (12%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG G+SA+A++ L+ G+ V+GSD+ E L GA ++IGH+ +I G D
Sbjct: 8 VHFIGIGGYGMSAIARVMLEMGYTVTGSDVASQELTEKLAAKGAKIYIGHTPEHIAGAD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV S+A+ +DNVE + A+ + +P R LA+L + IAV+G+HGK+TT+S
Sbjct: 67 -----IVVYSTALSRDNVERVAAEELNIPTLHRSQMLARLLNERKGIAVAGAHGKTTTSS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVT 256
M+A V++ D T I+G + G+ G FV+ EADE DG FL P +VT
Sbjct: 122 MIALVMERCNVDPTYIIGGEITNL--GTNAKAGKSEFVVAEADESDGSFLQYHPWQGIVT 179
Query: 257 NLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
N++ +H++ ++ D + +KS + +FL QIR G ++C D Q R +L Q++
Sbjct: 180 NIEADHLENYDGDFNRLKSAYVQFLSQIRPDGAAIVCADDQNIREMLPQLQT-------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS---DYILCERGRPLAQI 372
++ITYG D+ A ++Q G + + +G L I
Sbjct: 232 -----------------RVITYGVEHEADYMA----TDIQLGDRRLSFTMSRKGTALGTI 270
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC 432
L +PG HN+ N++A + + L + + IA + +F G RRF ++G
Sbjct: 271 ELSVPGKHNMYNAMATVISCL----EAGIPFDQIAA---TIVEFHGAKRRFQVLGEGNDI 323
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
I DD+AHHPTE+ A + AAR K +IAVFQP YSR L D F+ A SEA++V++
Sbjct: 324 LIIDDYAHHPTEIEATISAARA--TGKRIIAVFQPQRYSRTFFLLDAFSRAFSEANEVII 381
Query: 493 SAV 495
+ +
Sbjct: 382 TDI 384
>gi|392304337|emb|CCI70700.1| UDP-N-acetylmuramate-alanine ligase [Paenibacillus polymyxa M1]
Length = 459
Score = 241 bits (614), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 147/423 (34%), Positives = 229/423 (54%), Gaps = 51/423 (12%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG G+SA+A++ L+ G+ V+GSD+ E L GA ++IGH+ +I G D
Sbjct: 7 VHFIGIGGYGMSAIARVMLEMGYTVTGSDVASQELTEKLAAKGAKIYIGHTPEHIAGAD- 65
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV S+A+ +DNVE + A+ + +P R LA+L + IAV+G+HGK+TT+S
Sbjct: 66 -----IVVYSTALSRDNVERVAAEELNIPTLHRSQMLARLLNERKGIAVAGAHGKTTTSS 120
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVT 256
M+A V++ D T I+G + G+ G FV+ EADE DG FL P +VT
Sbjct: 121 MIALVMERCNVDPTYIIGGEITNL--GTNAKAGKSEFVVAEADESDGSFLQYHPWQGIVT 178
Query: 257 NLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
N++ +H++ ++ D + +KS + +FL QIR G ++C D Q R +L Q++
Sbjct: 179 NIEADHLENYDGDFNRLKSAYVQFLSQIRPDGAAIVCADDQNIREMLPQLQT-------- 230
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS---DYILCERGRPLAQI 372
++ITYG D+ A ++Q G + + +G L I
Sbjct: 231 -----------------RVITYGVEHEADYMA----TDIQLGDRRLSFTMSRKGTALGTI 269
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC 432
L +PG HN+ N++A + + L + + IA + +F G RRF ++G
Sbjct: 270 ELSVPGKHNMYNAMATVISCL----EAGIPFDQIAA---TIVEFHGAKRRFQVLGEGNDI 322
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
I DD+AHHPTE+ A + AAR K +IAVFQP YSR L D F+ A SEA++V++
Sbjct: 323 LIIDDYAHHPTEIEATISAARA--TGKRIIAVFQPQRYSRTFFLLDAFSRAFSEANEVII 380
Query: 493 SAV 495
+ +
Sbjct: 381 TDI 383
>gi|51894054|ref|YP_076745.1| UDP-N-acetylmuramate-alanine ligase [Symbiobacterium thermophilum
IAM 14863]
gi|59798212|sp|Q67K97.1|MURC_SYMTH RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|51857743|dbj|BAD41901.1| UDP-N-acetylmuramate-alanine ligase [Symbiobacterium thermophilum
IAM 14863]
Length = 482
Score = 241 bits (614), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 156/432 (36%), Positives = 238/432 (55%), Gaps = 51/432 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG-HSV 129
K RK +HF+G+GG G+SALA + ++G VSGSD+ S+ + L EAG +HIG H
Sbjct: 2 LKARK--VHFIGVGGYGMSALAMVLKQRGTAVSGSDVAASARTQRLAEAGVEVHIGAHDA 59
Query: 130 SNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGS 189
++I+G D VV S+ +P+DN E+ A++ G+ + R LA+ + IAV+G+
Sbjct: 60 AHIEGAD------VVVYSTQVPEDNPELAAARARGLRVLHRSELLAEFLNGRS-IAVAGT 112
Query: 190 HGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLS 249
HGK+TT+SM+A +L+ G D T ++G + + G+ G G V EADE D FL
Sbjct: 113 HGKTTTSSMVACLLEKAGLDPTILLGGDL-EVIGGTGKAGRGDWVVAEADESDRSFLRYH 171
Query: 250 PSVAVVTNLDWEHVDIFEDEDA-VKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQD 308
P VAVVTN++ EH++ +E A ++ FR+FL+Q++ GG +C D RS+ +++
Sbjct: 172 PRVAVVTNVEPEHLEFWEGSFARIQEGFRQFLRQVQPGGLAALCADDPTLRSIGQELRNQ 231
Query: 309 TGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP 368
G+ + ++ YG +W AE++ P + G Y GR
Sbjct: 232 PGVVH--------------------VVFYGTHPEAEWRAENIRP-WEKGIVYDCVRDGRL 270
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDK-----RQSHESIACLKLPLSKFMGVSRRF 423
L ++ L IPG HN LNSL + + GD RQ E+ L F RRF
Sbjct: 271 LGEVRLPIPGRHNALNSLGAL-----VAGDYAGLSFRQMQET-------LLSFGNARRRF 318
Query: 424 DLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANA 483
++ + G + DD+AHHPTE+RA L AAR++ + ++AVFQP YSR L D+FA A
Sbjct: 319 EVWADVDGIRVVDDYAHHPTEIRATLAAAREQ-AGRRVVAVFQPQRYSRTHWLMDEFATA 377
Query: 484 LSEADQVVVSAV 495
+AD +V++ +
Sbjct: 378 FQDADVLVLTRI 389
>gi|167759619|ref|ZP_02431746.1| hypothetical protein CLOSCI_01977 [Clostridium scindens ATCC 35704]
gi|167662745|gb|EDS06875.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium scindens ATCC
35704]
Length = 487
Score = 241 bits (614), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 159/420 (37%), Positives = 234/420 (55%), Gaps = 42/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI-QGND 136
+HF+GIGG +S LA++ LK+GF +SGSD S+ L + GA + G SNI +G D
Sbjct: 40 VHFIGIGGISMSGLAEILLKEGFAISGSDNKESALTSHLKQQGATIFYGQKASNIIEGID 99
Query: 137 GSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTT 195
VV ++AI +DN E A G+P+ R L +L Y++ IA+SG+HGK+TT
Sbjct: 100 ------VVVYTAAIHEDNEEYAQALKKGLPMLSRAELLGQLMTNYDVPIAISGTHGKTTT 153
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SML+++L A D T VG + + G+I G + FV EA EY FL P ++V+
Sbjct: 154 TSMLSHILLAGEMDPTISVGG-ILKAIGGNIKVGKSELFVTEACEYTNSFLHFFPKISVI 212
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
N+D +H+D F+D D ++S F +F K + G L+I G+ +D++
Sbjct: 213 LNIDEDHLDFFKDLDDIRSSFHKFAKLLPKDGTLIINGN-------IDKL---------- 255
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQ 375
D +G D +II YG S D+ A ++ N G + + L + G + +ISL
Sbjct: 256 --------DCITKGLDCRIIKYGDDSSMDYSATNISHNKLGEASFDLVKAGVFVDRISLS 307
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
+ G HNV N+LA IA V L+G S+ +K L +F G +RRF+ G + G I
Sbjct: 308 VNGDHNVSNALAAIA-VSDLLG------VSLDKMKKGLKEFTGTNRRFEYKGEMDGVTII 360
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHPTE+ A L AA+ +P++ L VFQPHTY+R L +F AL+ AD VV+S +
Sbjct: 361 DDYAHHPTEINATLTAAKY-YPHRELWCVFQPHTYTRTKALFHEFVEALAHADHVVLSDI 419
>gi|308070406|ref|YP_003872011.1| UDP-N-acetylmuramate--L-alanine ligase [Paenibacillus polymyxa
E681]
gi|305859685|gb|ADM71473.1| UDP-N-acetylmuramate--L-alanine ligase
(UDP-N-acetylmuramoyl-L-alanine synthetase)
[Paenibacillus polymyxa E681]
Length = 459
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 147/423 (34%), Positives = 228/423 (53%), Gaps = 51/423 (12%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG G+SA+A++ L+ G+ V+GSD+ E L GA ++IGH+ +I G D
Sbjct: 7 VHFIGIGGYGMSAIARVMLEMGYTVTGSDVASQELTEKLAAKGAKIYIGHTPEHIAGAD- 65
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV S+A+ +DNVE + A+ + +P R LA+L + IAV+G+HGK+TT+S
Sbjct: 66 -----IVVYSTALSRDNVERVAAEELNIPTLHRSQMLARLLNERKGIAVAGAHGKTTTSS 120
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVT 256
M+A V++ D T I+G + G+ G FV+ EADE DG FL P +VT
Sbjct: 121 MIALVMERCNVDPTYIIGGEITNL--GTNAKAGKSEFVVAEADESDGSFLQYHPWQGIVT 178
Query: 257 NLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
N++ +H++ ++ D + +KS + +FL QIR G ++C D Q R +L Q++
Sbjct: 179 NIEADHLENYDGDFNRLKSAYVQFLSQIRPDGAAIVCADDQNIREMLPQLQT-------- 230
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS---DYILCERGRPLAQI 372
++ITYG D+ A ++Q G + + +G L I
Sbjct: 231 -----------------RVITYGVEHEADYMA----TDIQLGDRRLSFTMSRKGTALGTI 269
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC 432
L +PG HN+ N++A + + L + + IA + +F G RRF ++G
Sbjct: 270 ELSVPGKHNMYNAMATVISCL----EAGIPFDQIAA---TIVEFHGAKRRFQVLGESNDI 322
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
I DD+AHHPTE+ A + AAR K +IAVFQP YSR L D F+ A SEA +V++
Sbjct: 323 LIIDDYAHHPTEIEATISAARA--TGKRIIAVFQPQRYSRTFFLLDAFSRAFSEASEVII 380
Query: 493 SAV 495
+ +
Sbjct: 381 TDI 383
>gi|86160190|ref|YP_466975.1| UDP-N-acetylmuramate--L-alanine ligase [Anaeromyxobacter
dehalogenans 2CP-C]
gi|109892690|sp|Q2IG30.1|MURC_ANADE RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|85776701|gb|ABC83538.1| UDP-N-acetylmuramate--L-alanine ligase [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 458
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 147/426 (34%), Positives = 232/426 (54%), Gaps = 43/426 (10%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
F++R+ IHFVG+GG G+S +A++ L G+ VSGSDL S L G ++ GH+
Sbjct: 4 FRSRQAKIHFVGVGGIGMSGIAEVLLNLGYTVSGSDLRESETTRRLAGLGGHISYGHAAE 63
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N+ D VV SSA+ +DN E+L A+ +P+ R LA+L +A++GSH
Sbjct: 64 NVLQVD------VVVISSAVKRDNPEVLEARRRKIPVIPRAEMLAELMRLKYGVAIAGSH 117
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT SM A++L G D TA+VG V F + G G V+EADE DG FL + P
Sbjct: 118 GKTTTTSMAAHLLAHAGLDPTAVVGGKVNAFGSNAKL-GKGDYMVVEADESDGSFLRIPP 176
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
++A+VTN+D EH+D ++ DA++ F F+ ++ G ++C D +S+L +++
Sbjct: 177 TIAIVTNIDPEHLDHWKTPDALRRGFVDFVNRVPFYGLAILCIDHPTVQSILPDVEK--- 233
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS-DYILCERGRPL 369
+++TYG S D+ AE++ + G + + R L
Sbjct: 234 ----------------------RVVTYGESHQADYRAEAI--ELSGHAVRFDAFRRDEAL 269
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
+ + + G HN LN+LAVIA +GD+ + + L F GV RRF + G +
Sbjct: 270 GRFEVAMVGRHNALNALAVIA-----LGDEMGIPPLVT--REALRSFQGVQRRFTVRGEV 322
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
G + DD+ HHP EV+A LQ AR+ F + ++ +FQPH Y+R L +FA A ++AD
Sbjct: 323 AGVTVVDDYGHHPAEVKATLQGAREAFKRR-VVCLFQPHRYTRTRDLMAEFATAFNDADV 381
Query: 490 VVVSAV 495
++++ +
Sbjct: 382 LLLTDI 387
>gi|188997128|ref|YP_001931379.1| UDP-N-acetylmuramate/alanine ligase [Sulfurihydrogenibium sp.
YO3AOP1]
gi|254766029|sp|B2VA52.1|MURC_SULSY RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|188932195|gb|ACD66825.1| UDP-N-acetylmuramate/alanine ligase [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 454
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 151/431 (35%), Positives = 219/431 (50%), Gaps = 57/431 (13%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
F+ + IHF+GIGGSG++ +A+L L QG+ ++GSDL S +E L GA + IGHS
Sbjct: 2 FRGKVRKIHFIGIGGSGMNGIAELLLNQGYTITGSDLKESPTIERLRNLGAKIFIGHSEE 61
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N++ D VV SSA+ DN E++ AK +G+P R LA+L IA++GSH
Sbjct: 62 NVKDAD------VVVYSSAVKPDNPEMIKAKQLGIPTIPRGEMLAELMRFKYGIAIAGSH 115
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT SM+ VL G D T ++G + + + G G+ V E+DE DG FL L+P
Sbjct: 116 GKTTTTSMVGTVLGKTGFDPTVVIGGKLEAYGSNAKL-GRGEFLVTESDESDGSFLKLTP 174
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
++ + N+D EH+ ++D + +K F F ++ G + D + +S+L I++
Sbjct: 175 TIVSINNIDLEHIGFYKDLEDIKKAFVAFANKVPFYGAAAVNIDDENVKSILPYIER--- 231
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR--- 367
K+I +GFS D A V E GR
Sbjct: 232 ----------------------KVIKFGFSEDADIRAYDV-----------RLENGRYKF 258
Query: 368 ---PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFD 424
+I L +PG+HNV N+LA IA L +K L F RRF+
Sbjct: 259 KVNDFGEIHLSVPGIHNVYNALATIAICNEL-------SVPFCVIKESLENFKNAKRRFE 311
Query: 425 LIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANAL 484
I + DD+AHHPTE++A L AAR F ++ +IAVFQPH YSRL L ++FA A
Sbjct: 312 -IKYSNDIIVIDDYAHHPTELKATLSAARDYFKDRRIIAVFQPHRYSRLNALFEEFAKAF 370
Query: 485 SEADQVVVSAV 495
D +V+ V
Sbjct: 371 DIPDITIVTEV 381
>gi|187777470|ref|ZP_02993943.1| hypothetical protein CLOSPO_01038 [Clostridium sporogenes ATCC
15579]
gi|187774398|gb|EDU38200.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium sporogenes ATCC
15579]
Length = 458
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 146/429 (34%), Positives = 229/429 (53%), Gaps = 45/429 (10%)
Query: 70 DF-KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
DF K++ IHF+GIGG +S LA++ L F +SGSD+ S E L E GAN++IGH
Sbjct: 4 DFIKDKNKHIHFIGIGGISMSGLAEILLYHNFTISGSDMNSSPITEKLKEKGANIYIGHK 63
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAV 186
NI+ D +V ++AI DN EI+ AK + + R +L L + KYN +A+
Sbjct: 64 KENIKNAD------LIVYTAAIASDNPEIIEAKEKNIKLMDRADFLGDLMKGYKYN-VAI 116
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
SG+HGK+TT SML++V D T +VG ++ +G++ G F+ EA EY FL
Sbjct: 117 SGTHGKTTTTSMLSHVALKANVDPTILVGGNL-DIINGNVRVGKSDFFITEACEYKSSFL 175
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 306
P + V+ N+D +H+D ++D D +K+ F +F+K I G+L+ G+ + +S++ +
Sbjct: 176 KFFPYIGVILNIDADHLDYYKDLDDIKNAFSKFIKLIPKDGYLIAYGEDKNIQSIIKEA- 234
Query: 307 QDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERG 366
+ +ITYG +S D A ++ + + + + +
Sbjct: 235 ------------------------NCNVITYGINS-GDIQAHNIEYDEKACGSFDVVKNK 269
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
+ L + L +PG HN+LNSLA I L +E I + F G RRF+L
Sbjct: 270 QKLFSVKLNVPGKHNILNSLASICIGLA----SNMKNEDII---EGIESFFGTHRRFELK 322
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G + DD+AHHPTE+ A L AA+ ++P+ + VFQPHTYSR + L DDF
Sbjct: 323 GCKNNITVIDDYAHHPTEISATLDAAK-KYPHNKMFCVFQPHTYSRTLTLFDDFTKCFDN 381
Query: 487 ADQVVVSAV 495
AD+++++ +
Sbjct: 382 ADEIILADI 390
>gi|410478397|ref|YP_006766034.1| UDP-N-acetylmuramate-alanine ligase [Leptospirillum ferriphilum
ML-04]
gi|406773649|gb|AFS53074.1| UDP-N-acetylmuramate-alanine ligase [Leptospirillum ferriphilum
ML-04]
Length = 443
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 151/406 (37%), Positives = 214/406 (52%), Gaps = 42/406 (10%)
Query: 91 LAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAI 150
+A++ L +G VSGSD + L E GA + +GH + D AVV S+AI
Sbjct: 1 MAEILLSRGALVSGSDKTQTDLTRRLSELGARVFVGHRAEQVGAVD------AVVISTAI 54
Query: 151 PQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDL 210
Q+N E+L A+ +G+P+ R LA + + +AV+GSHGK+TT SM+A+VL G D
Sbjct: 55 SQENPELLEARRLGIPVVHRGEALAGIMRGFQGVAVAGSHGKTTTTSMIAHVLAHGGLDP 114
Query: 211 TAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDED 270
T +VG VP F G+ G F+ EADE DG FL +SP VAVVTN+D EH+D ++ D
Sbjct: 115 TCVVGGRVPGF-GGNARVGKKNIFIAEADESDGSFLKISPHVAVVTNVDQEHLDYYQSFD 173
Query: 271 AVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGH 330
+K+ F RFL + G V C D ++L + ++ W
Sbjct: 174 QLKAAFERFLTSVPPEGLAVACLDDPELSNILPSL----------------NAPHW---- 213
Query: 331 DYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPLAQISLQIPGVHNVLNSLAVI 389
TYGFS D V + +G + + + RG+ + L +PGVHNVLN+LA I
Sbjct: 214 -----TYGFSPAADVVGSDV--SAEGLSTSFSVRLRGKDIGTFMLNVPGVHNVLNALATI 266
Query: 390 ATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVL 449
A V G + + C + L +F GV RRF +G G I DD+ HHPTE+ L
Sbjct: 267 A-VAHHFGLEAE------CAREALERFRGVGRRFTQVGEEGGIRIVDDYGHHPTEIGVTL 319
Query: 450 QAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
AARQ +P++ L+ FQPH +SR L FA+A AD +V+ +
Sbjct: 320 AAARQAYPDRRLVVAFQPHRFSRTRDLLSRFASAFQLADVLVLGEI 365
>gi|115372803|ref|ZP_01460109.1| UDP-N-acetylmuramate--alanine ligase [Stigmatella aurantiaca
DW4/3-1]
gi|310823487|ref|YP_003955845.1| UDP-n-acetylmuramate--l-alanine ligase [Stigmatella aurantiaca
DW4/3-1]
gi|115370284|gb|EAU69213.1| UDP-N-acetylmuramate--alanine ligase [Stigmatella aurantiaca
DW4/3-1]
gi|309396559|gb|ADO74018.1| UDP-N-acetylmuramate--L-alanine ligase [Stigmatella aurantiaca
DW4/3-1]
Length = 475
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 151/427 (35%), Positives = 227/427 (53%), Gaps = 44/427 (10%)
Query: 71 FKNRKG-WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSV 129
FK R +HFVG+GG G+S +A++ + G+ VSGSDL S L GA + GH
Sbjct: 12 FKTRHAAHVHFVGLGGIGMSGIAEVLINLGYRVSGSDLKESDITRRLARMGATFYEGHKA 71
Query: 130 SNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGS 189
N+ D VV SSA+ +DN E++ A+ +P+ R LA+L +AV+GS
Sbjct: 72 QNLVHAD------VVVISSAVKKDNPEVVAARQRKIPVIPRAEMLAELMRLKYAVAVAGS 125
Query: 190 HGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLS 249
HGK+TT SM+A VL A G D TA+VG V D + G + V+EADE DG FL L
Sbjct: 126 HGKTTTTSMVATVLSAAGLDPTAVVGGKV-NVLDSNAKLGKSELMVVEADESDGSFLKLH 184
Query: 250 PSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
PS+AVVTN+D EH+D + D +++ F F ++ G V+C D ++LL ++++
Sbjct: 185 PSIAVVTNIDPEHMDHYGTLDVLQTAFVEFCNRVPFYGLNVLCLDHPNVQALLPRLEK-- 242
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRP 368
+ +TYG S D+ E V ++G + + R P
Sbjct: 243 -----------------------RAVTYGSSHMADYRLEGVT--LEGFTTRFQAFRRDEP 277
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
L + +++ G HN LN+LAVIA + + ++ L++F GV RRF + G
Sbjct: 278 LGEFRVRMVGAHNALNALAVIAVA-------EEMEIPLDMVRGALAEFGGVQRRFTVRGE 330
Query: 429 IYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
+ G + DD+ HHPTEV A L AR+ F + L+ FQPH Y+R L +FA + +++D
Sbjct: 331 VGGVTVVDDYGHHPTEVMATLAGARKAF-GRRLVVAFQPHRYTRTHDLLKEFATSFNDSD 389
Query: 489 QVVVSAV 495
+ V++V
Sbjct: 390 VLFVTSV 396
>gi|238927323|ref|ZP_04659083.1| UDP-N-acetylmuramate--L-alanine ligase [Selenomonas flueggei ATCC
43531]
gi|238884605|gb|EEQ48243.1| UDP-N-acetylmuramate--L-alanine ligase [Selenomonas flueggei ATCC
43531]
Length = 785
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 154/429 (35%), Positives = 230/429 (53%), Gaps = 46/429 (10%)
Query: 71 FKNRKGW--IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHI-GH 127
K KG IHFVGIGG+G+S LAK+ L+ G+ VSGSD S + L GA++ G
Sbjct: 5 LKELKGIQKIHFVGIGGAGMSPLAKILLQLGYTVSGSDTGDSPLIGELARLGAHVWTDGQ 64
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
+++G D A+V S+AIP DN E++ A + +P R A L +Y+ IAV+
Sbjct: 65 HAEHVRGAD------AIVVSTAIPYDNPEVIAAWDLRIPKLHRSDINAALVNEYDGIAVA 118
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
GSHGK+TT SM+ L +G T IVG VP + G + V EADE DG FL
Sbjct: 119 GSHGKTTTTSMIGVTLDHVGASPTIIVGGEVPDLGTNAKL-GTSRYLVSEADESDGSFLK 177
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
L P +AVVTN++ +H+D + + + + FR+F++Q+ G V+C ++ R++ + K+
Sbjct: 178 LRPHIAVVTNVEDDHMDHYGTMEKIIAAFRQFIEQVDTDGAAVLCFENANLRNIARETKR 237
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG-SDYILCERG 366
+++Y D+ A + +G + + ERG
Sbjct: 238 -------------------------CVVSYAIDYEADYRASDI--ETRGSLISFTVHERG 270
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
+ ISL IPG HNVLN+LA IA V L+G + ++ L++F G RRF
Sbjct: 271 AEMGHISLNIPGRHNVLNALACIA-VARLVGVE------FPAIRAALAQFHGAKRRFQTK 323
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G G + DD+AHHPTE+ L AARQ P + LI VFQPH YSR +L+++F ++
Sbjct: 324 GKERGVWVVDDYAHHPTEISVTLAAARQTNPER-LICVFQPHRYSRTQLLREEFGRCFAD 382
Query: 487 ADQVVVSAV 495
AD ++++ +
Sbjct: 383 ADLLLLTDI 391
>gi|357015136|ref|ZP_09080135.1| UDP-N-acetylmuramate/alanine ligase [Paenibacillus elgii B69]
Length = 463
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 142/424 (33%), Positives = 227/424 (53%), Gaps = 43/424 (10%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
N IHF+GIGG G+SA+AK+ L+ G++VSGSDL E L GA + IGH N+
Sbjct: 6 NTSEHIHFIGIGGYGMSAIAKVMLEMGYQVSGSDLAQQELTEKLAAKGAQVFIGHEAQNV 65
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
+G D VV S+A+ +DNVE++ A+ + +PI R LA+L IAV+G+HGK
Sbjct: 66 KGAD------VVVYSTALAKDNVEMVAAEELNIPILHRSQMLARLMNAKKGIAVAGAHGK 119
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+TT+SM+A VL+ D T I+G + + G G V EADE DG FL P++
Sbjct: 120 TTTSSMIALVLERCSLDPTFIIGGEIMNVGSNA-KAGKGDWVVAEADESDGSFLQYQPAI 178
Query: 253 AVVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
A+V N++ +H++ ++ + +K + +FL Q++ G V+C D Q + ++ + +
Sbjct: 179 ALVNNIEADHLENYDGNFENLKKAYAQFLSQVKEDGKAVVCLDDQYLKEMISSVNSE--- 235
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQ 371
++TY + D+ A ++ + S + + L
Sbjct: 236 ----------------------VLTYAIEAEADFTARNIVLGDRKVS-FDVMRGAEALGT 272
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG 431
I L +PG HNV N+LA + T + + E IA +++F G RRF ++G +
Sbjct: 273 IHLSVPGKHNVYNALATLITCM----EAGLPFERIAE---AITEFRGAKRRFQVLGEVDD 325
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+AHHPTE+ A +QAA+ K ++AVFQP Y+R L + F+ A EAD+V+
Sbjct: 326 ILVIDDYAHHPTEIEATIQAAKA--TGKRIVAVFQPQRYTRTFFLFEQFSRAFPEADEVI 383
Query: 492 VSAV 495
++ +
Sbjct: 384 ITDI 387
>gi|326390852|ref|ZP_08212404.1| UDP-N-acetylmuramate/alanine ligase [Thermoanaerobacter ethanolicus
JW 200]
gi|325993111|gb|EGD51551.1| UDP-N-acetylmuramate/alanine ligase [Thermoanaerobacter ethanolicus
JW 200]
Length = 464
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 144/420 (34%), Positives = 230/420 (54%), Gaps = 43/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG +S LA + L G V+GSD+ S +E L + GA + I H+ +++ G D
Sbjct: 11 VHFIGIGGISMSGLAHILLNNGHIVTGSDIKNSHIIERLRQEGAVITIPHNENSVIGAD- 69
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTTA 196
VV ++AI +DN E AK + +P R L + +KY IAV+GSHGK+TT
Sbjct: 70 -----LVVYTAAIHEDNPEYQKAKELNIPTIDRATLLGLIMKKYKYGIAVAGSHGKTTTT 124
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
S+++ +L MG D T +VG V G++ G + F+ EA EY FL P +AV+
Sbjct: 125 SLISVILDGMGFDPTVLVGGEVDVIG-GNVRVGNSEYFLTEACEYTDSFLKFYPYIAVIL 183
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N+D +H+D F++ D +K FR+F + G +V C D +++ + ++
Sbjct: 184 NVDSDHLDYFKNIDNIKQSFRQFANLVPPDGFVVACKDDANTMYVVNGLNKN-------- 235
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
I+TYG +DW A+++ + +G + + + + + L I
Sbjct: 236 -----------------IVTYGIYQDSDWKAKNISFDDKGCAIFDVYYKEEYMGNFKLSI 278
Query: 377 PGVHNVLNSLAVIA-TVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
PG HNV N+LA +A + L I K+ SH L++F G RRF++ G + G I
Sbjct: 279 PGKHNVYNALAALAVSHLVGIDIKKASHY--------LTEFKGTHRRFEIKGIVDGITIV 330
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHP E++A L+AA+ +P+K +I +FQPHTYSR L +DFA + AD+++++ +
Sbjct: 331 DDYAHHPAEIKATLEAAKN-YPHKRIICIFQPHTYSRTKSLLNDFAGSFDNADKIIIADI 389
>gi|256751648|ref|ZP_05492523.1| UDP-N-acetylmuramate/alanine ligase [Thermoanaerobacter ethanolicus
CCSD1]
gi|256749457|gb|EEU62486.1| UDP-N-acetylmuramate/alanine ligase [Thermoanaerobacter ethanolicus
CCSD1]
Length = 464
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 145/420 (34%), Positives = 230/420 (54%), Gaps = 43/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG +S LA + L G V+GSD+ S +E L + GA + I H+ +++ G D
Sbjct: 11 VHFIGIGGISMSGLAHILLNNGHIVTGSDIKNSHIIERLRQEGAVITIPHNENSVIGAD- 69
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTTA 196
VV ++AI +DN E AK + +PI R L + +KY IAV+GSHGK+TT
Sbjct: 70 -----LVVYTAAIHEDNPEYQKAKELNIPIIDRATLLGLIMKKYKYGIAVAGSHGKTTTT 124
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
S+++ +L M D T +VG V G++ G + FV EA EY FL P +AV+
Sbjct: 125 SLISVILDGMEFDPTVLVGGEVDVIG-GNVRVGSSEYFVTEACEYTDSFLKFYPYIAVIL 183
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N+D +H+D F++ D +K FR+F + G +V C D +++ + ++
Sbjct: 184 NVDSDHLDYFKNIDNIKQSFRQFANLVPPDGFVVACKDDANTMYVVNGLNKN-------- 235
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
I+TYG +DW A+++ + +G + + + + + L I
Sbjct: 236 -----------------IVTYGIYEDSDWKAKNISFDDKGCAIFDVYYKEEYMGNFKLSI 278
Query: 377 PGVHNVLNSLAVIA-TVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
PG HNV N+LA +A + L I K+ SH L++F G RRF++ G + G I
Sbjct: 279 PGKHNVYNALAALAVSHLVGIDIKKASHY--------LTEFKGTHRRFEIKGIVDGITIV 330
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHP E++A L+AA+ +P+K +I +FQPHTYSR L +DFA + AD+++++ +
Sbjct: 331 DDYAHHPAEIKATLEAAKN-YPHKRIICIFQPHTYSRTKSLLNDFAESFDNADKIIIADI 389
>gi|452991259|emb|CCQ97438.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium ultunense Esp]
Length = 456
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 150/424 (35%), Positives = 230/424 (54%), Gaps = 47/424 (11%)
Query: 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQG 134
K IHF+GIGGSG+SALA++ L+QG+ VSGSD+V ++ L + GA ++IGH +++
Sbjct: 4 KKRIHFIGIGGSGMSALARVFLEQGYPVSGSDMVRKHLVKELEQMGAMVYIGHHPDHVKE 63
Query: 135 NDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKST 194
D VV +S IP++N E+ AK + +P+ R LA++ IAVSGSHGK+T
Sbjct: 64 AD------LVVYTSDIPEENAELAEAKRLLLPVMHRSDLLAEILNGKKGIAVSGSHGKTT 117
Query: 195 TASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAV 254
T S+++++L+ G D T I+G + + G G+ V EADE D FL P + V
Sbjct: 118 TTSLISFLLEKAGLDPTYIIGGEMMNGGGNA-RAGQGEYVVAEADESDRTFLKYHPHIGV 176
Query: 255 VTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 313
+TN++ +H++ + ED +K F RF Q++ GG VIC D R + IK DT
Sbjct: 177 ITNIEPDHLENYEEDYRKMKEAFLRFANQVKPGGKAVICLDDPDIREIASHIKSDT---- 232
Query: 314 SGGVVSNQSSDLWGQGHDYKIITYGFSSFN-DWYAESVCPNVQG-GSDYILCERGRPLAQ 371
ITYG D+ A + QG G ++ ERG+ L +
Sbjct: 233 ---------------------ITYGMKEEKADYLAREID---QGDGLSFLAVERGKELGR 268
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG 431
I+L + G HN+ N+LA +A R + S + + +F G RRF LIG +
Sbjct: 269 ITLHLAGKHNIYNALAALAVA-------RYAGISFDTIAAAMEEFRGAKRRFQLIGEVDQ 321
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
I DD+A HPTE+RA L+AA++ + ++A+FQPH +R L +F + +AD+V
Sbjct: 322 IRIVDDYAVHPTEIRATLRAAKE--TGRRVLALFQPHRVTRAYYLFGEFGRSFQDADRVY 379
Query: 492 VSAV 495
++ +
Sbjct: 380 ITEI 383
>gi|255659952|ref|ZP_05405361.1| UDP-N-acetylmuramate--alanine ligase [Mitsuokella multacida DSM
20544]
gi|260847826|gb|EEX67833.1| UDP-N-acetylmuramate--alanine ligase [Mitsuokella multacida DSM
20544]
Length = 465
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 159/430 (36%), Positives = 230/430 (53%), Gaps = 45/430 (10%)
Query: 70 DFKNRKG--WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG- 126
+ K KG IHFVGIGG+G+S LAK+ ++ G+EVSGSD S +E L + GA + +G
Sbjct: 4 ELKELKGIKKIHFVGIGGAGMSPLAKMMVELGYEVSGSDREDSGIIEKLRQMGAKITLGG 63
Query: 127 HSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAV 186
N++G D A+V S+AIP DN E+L AK +G+ R A L +Y IAV
Sbjct: 64 QKAENVRGVD------AIVVSTAIPFDNPEVLAAKDLGITKLHRSDINAALVNEYKGIAV 117
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
+G+HGK+TT SML L G + +VG VP + G V EADE DG FL
Sbjct: 118 AGAHGKTTTTSMLGVALTHAGVSPSVVVGGEVPDLGTNAEL-GTSDYLVSEADESDGSFL 176
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQI-RVGGHLVICGDSQCARSLLDQI 305
L P +AVVTN++ +H+D + + + F +F++ + + G+ VIC D++ R++ +
Sbjct: 177 KLHPHIAVVTNVEDDHMDHYGTMENIIKAFTQFIQNVDKETGYAVICFDNENLRNMAKNL 236
Query: 306 KQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER 365
D K ITY D+ A+++ + G S + +
Sbjct: 237 -------------------------DRKYITYAIDHEADYRAKNITHSGTGIS-FDVFHG 270
Query: 366 GRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
L + L IPG HNVL+++A I T L++ S E +A L+ F G RRF
Sbjct: 271 EEELGHVDLNIPGRHNVLDAMACIVTGLSI----GVSFEKMAS---GLAAFHGAKRRFQT 323
Query: 426 IGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
G + G I DD+AHHPTE+ A L+AA++ P K LI VFQPH YSR +L ++F A
Sbjct: 324 KGRVNGVWIVDDYAHHPTEIAATLKAAKETNP-KRLICVFQPHRYSRTQLLHEEFGKAFV 382
Query: 486 EADQVVVSAV 495
AD +V++ V
Sbjct: 383 SADVLVLTDV 392
>gi|260589032|ref|ZP_05854945.1| UDP-N-acetylmuramate--alanine ligase [Blautia hansenii DSM 20583]
gi|260540811|gb|EEX21380.1| UDP-N-acetylmuramate--alanine ligase [Blautia hansenii DSM 20583]
Length = 474
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 144/428 (33%), Positives = 231/428 (53%), Gaps = 41/428 (9%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DF ++ IHF+GIGG +S LA++ L + F +SGSD S + L E GA ++IG
Sbjct: 19 IDF-HKPLHIHFIGIGGISMSGLAEILLGEAFPISGSDSKVSELTQHLEEKGAKIYIGQR 77
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVS 187
SNI + + VV ++AI +DN E AK G+P+ R L ++ + Y L IAV+
Sbjct: 78 ASNITDD-----IDLVVYTAAIHEDNPEFACAKEKGIPMITRAELLGQIMKNYRLPIAVA 132
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT SM+++VL D T VG +P G+I G + F+ EA EY FL
Sbjct: 133 GTHGKTTTTSMISHVLLEAEADPTISVGGILPAI-HGNIRVGNSETFITEACEYTNSFLS 191
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P ++++ N+D +H+D F+D D ++ FR F +++ G L+I GD + D++
Sbjct: 192 FFPKISIILNIDADHLDFFKDLDDIRHSFRLFAEKLPADGTLIINGDIPNVEEITDKLP- 250
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR 367
++ITYG D+ A ++ + + + +G+
Sbjct: 251 ------------------------CEVITYGLEKAADYTAANITFDETAHASFDCLHKGQ 286
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
+ + SL +PG+HNV N+L+ IA +G+K + ++ + F G RRF G
Sbjct: 287 CIGRFSLAVPGLHNVSNALSAIA-----LGEKVGF--DLDTVRRGILHFGGTDRRFQYKG 339
Query: 428 TIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ G I DD+AHHPTE+ A L+ A +P+K VFQPHTY+R L D+FA+ L+ A
Sbjct: 340 KVAGVTIIDDYAHHPTEIAATLKTA-ANYPHKTTWCVFQPHTYTRTKALMDEFADVLATA 398
Query: 488 DQVVVSAV 495
++V+++ +
Sbjct: 399 ERVILADI 406
>gi|331083260|ref|ZP_08332373.1| UDP-N-acetylmuramate-L-alanine ligase [Lachnospiraceae bacterium
6_1_63FAA]
gi|330404341|gb|EGG83886.1| UDP-N-acetylmuramate-L-alanine ligase [Lachnospiraceae bacterium
6_1_63FAA]
Length = 459
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 144/428 (33%), Positives = 231/428 (53%), Gaps = 41/428 (9%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DF ++ IHF+GIGG +S LA++ L + F +SGSD S + L E GA ++IG
Sbjct: 4 IDF-HKPLHIHFIGIGGISMSGLAEILLGEAFPISGSDSKVSELTQHLEEKGAKIYIGQR 62
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVS 187
SNI + + VV ++AI +DN E AK G+P+ R L ++ + Y L IAV+
Sbjct: 63 ASNITDD-----IDLVVYTAAIHEDNPEFACAKEKGIPMITRAELLGQIMKNYRLPIAVA 117
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT SM+++VL D T VG +P G+I G + F+ EA EY FL
Sbjct: 118 GTHGKTTTTSMISHVLLEAEADPTISVGGILPAI-HGNIRVGNSETFITEACEYTNSFLS 176
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P ++++ N+D +H+D F+D D ++ FR F +++ G L+I GD + D++
Sbjct: 177 FFPKISIILNIDADHLDFFKDLDDIRHSFRLFAEKLPADGTLIINGDIPNVEEITDKLP- 235
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR 367
++ITYG D+ A ++ + + + +G+
Sbjct: 236 ------------------------CEVITYGLEKAADYTAANITFDETAHASFDCLHKGQ 271
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
+ + SL +PG+HNV N+L+ IA +G+K + ++ + F G RRF G
Sbjct: 272 CIGRFSLAVPGLHNVSNALSAIA-----LGEKVGF--DLDTVRRGILHFGGTDRRFQYKG 324
Query: 428 TIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ G I DD+AHHPTE+ A L+ A +P+K VFQPHTY+R L D+FA+ L+ A
Sbjct: 325 KVAGVTIIDDYAHHPTEIAATLKTA-ANYPHKTTWCVFQPHTYTRTKALMDEFADVLATA 383
Query: 488 DQVVVSAV 495
++V+++ +
Sbjct: 384 ERVILADI 391
>gi|217967632|ref|YP_002353138.1| UDP-N-acetylmuramate--L-alanine ligase [Dictyoglomus turgidum DSM
6724]
gi|254766000|sp|B8E324.1|MURC_DICTD RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|217336731|gb|ACK42524.1| UDP-N-acetylmuramate/alanine ligase [Dictyoglomus turgidum DSM
6724]
Length = 464
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 146/419 (34%), Positives = 227/419 (54%), Gaps = 43/419 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GI G+G+SALA + +++G+EVSGSD+ + L G ++ GH+ N+ D
Sbjct: 7 IHFIGIAGTGMSALAYICVERGYEVSGSDIQENISTIRLKSKGVKIYKGHNPENVNNVD- 65
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSAIP DN E ++AK +PI R LA LT++ I V G+HGK+TT S
Sbjct: 66 -----LVVISSAIPPDNEEYVYAKERNIPILHRSDLLADLTKEKKSIIVGGAHGKTTTTS 120
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A VL+ D T +VG + G+ G G+ V E DE DG L L P + V+TN
Sbjct: 121 MIALVLENNKIDPTILVGGELEDI-GGNAKLGNGEYLVAEGDESDGSILKLDPYILVITN 179
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D +H+D ++ + +K F + ++++ GG V+ D + R ++ +IK
Sbjct: 180 IDNDHLDYYKSLEKIKDTFLKVIEKVPKGGFAVLNLDCENVRDIIRKIKNK--------- 230
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
+ TYGFS+ D+ A+++ N+ GS++ + R L ++ L++P
Sbjct: 231 ---------------EYYTYGFSNA-DFKADNIVLNLS-GSEFDVYFRNEKLGRVKLRVP 273
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY-GCHIYD 436
G HN+LNSL+ IA L D + ++ L +F GV RR L G I ++D
Sbjct: 274 GKHNILNSLSAIAVSKILGLDFETTTKA-------LERFQGVQRRIQLKGIIEDDILVFD 326
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+ HHPTE++A L+ R N+ L+ VFQPH Y+R L + A ALS D ++++ +
Sbjct: 327 DYGHHPTEIKATLETL--RLYNRRLVVVFQPHRYTRTYFLSKEIAEALSLGDVIILTEI 383
>gi|167036589|ref|YP_001664167.1| UDP-N-acetylmuramate--L-alanine ligase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320115016|ref|YP_004185175.1| UDP-N-acetylmuramate/alanine ligase [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|166855423|gb|ABY93831.1| UDP-N-acetylmuramate--alanine ligase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319928107|gb|ADV78792.1| UDP-N-acetylmuramate/alanine ligase [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 464
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 145/420 (34%), Positives = 230/420 (54%), Gaps = 43/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG +S LA + L G V+GSD+ S +E L + GA + I H+ +++ G D
Sbjct: 11 VHFIGIGGISMSGLAHILLNNGHIVTGSDIKNSHIIERLRQEGAVITIPHNENSVIGAD- 69
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTTA 196
VV ++AI +DN E AK + +PI R L + +KY IAV+GSHGK+TT
Sbjct: 70 -----LVVYTAAIHEDNPEYQKAKELNIPIIDRATLLGLIMKKYKYGIAVAGSHGKTTTT 124
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
S+++ +L M D T +VG V G++ G + FV EA EY FL P +AV+
Sbjct: 125 SLISVILDGMEFDPTVLVGGEVDVIG-GNVRVGSSEYFVTEACEYTDSFLKFYPYIAVIL 183
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N+D +H+D F++ D +K FR+F + G +V C D +++ + ++
Sbjct: 184 NVDSDHLDYFKNIDNIKQSFRQFANLVPPDGFVVACKDDANTMYVVNGLNKN-------- 235
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
I+TYG +DW A+++ + +G + + + + + L I
Sbjct: 236 -----------------IVTYGIYQDSDWKAKNISFDDKGCAIFDVYYKEEYMGNFKLSI 278
Query: 377 PGVHNVLNSLAVIA-TVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
PG HNV N+LA +A + L I K+ SH L++F G RRF++ G + G I
Sbjct: 279 PGKHNVYNALAALAVSHLVGIDIKKASHY--------LTEFKGTHRRFEIKGIVDGITIV 330
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHP E++A L+AA+ +P+K +I +FQPHTYSR L +DFA + AD+++++ +
Sbjct: 331 DDYAHHPAEIKATLEAAKN-YPHKRIICIFQPHTYSRTKSLLNDFAGSFDNADKIIIADI 389
>gi|424835849|ref|ZP_18260508.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium sporogenes PA
3679]
gi|365977719|gb|EHN13817.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium sporogenes PA
3679]
Length = 458
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 146/429 (34%), Positives = 228/429 (53%), Gaps = 45/429 (10%)
Query: 70 DF-KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
DF K++ IHF+GIGG +S LA++ L F +SGSD+ S E L E GAN++IGH
Sbjct: 4 DFIKDKNKHIHFIGIGGISMSGLAEILLYHNFTISGSDMNSSPITEKLKEKGANIYIGHK 63
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAV 186
NI+ D +V ++AI DN EI+ AK + + R +L L + KYN +A+
Sbjct: 64 RENIKDAD------LIVYTAAIASDNPEIIEAKEKNIKLMDRADFLGDLMKGYKYN-VAI 116
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
SG+HGK+TT SML++V D T +VG ++ +G++ G F+ EA EY FL
Sbjct: 117 SGTHGKTTTTSMLSHVALKANVDPTILVGGNL-DIINGNVRVGKSDFFITEACEYKSSFL 175
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 306
P + V+ N+D +H+D ++D D +K+ F +F+K I G+LV G+ + +S++ +
Sbjct: 176 KFFPYIGVILNIDADHLDYYKDLDDIKNAFSKFIKLIPKDGYLVAYGEDKNIQSIIKEA- 234
Query: 307 QDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERG 366
+ +ITYG +S D A ++ + + + + +
Sbjct: 235 ------------------------NCNVITYGINS-GDIQAHNIEYDEKACGSFDVVKNK 269
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
+ L + L +PG HN+LNSLA I L +E I + F G RRF+L
Sbjct: 270 QKLFSVKLNVPGKHNILNSLASICIGLA----SNMKNEDII---QGIESFFGTHRRFELK 322
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G + DD+AHHPTE+ A L AA+ ++P+ + VFQPHTYSR + L DDF
Sbjct: 323 GCKNNITVIDDYAHHPTEISATLDAAK-KYPHNKMFCVFQPHTYSRTLTLFDDFTKCFDN 381
Query: 487 ADQVVVSAV 495
D+++++ +
Sbjct: 382 TDEIILADI 390
>gi|384086034|ref|ZP_09997209.1| UDP-N-acetylmuramate--alanine ligase [Acidithiobacillus thiooxidans
ATCC 19377]
Length = 464
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 150/424 (35%), Positives = 228/424 (53%), Gaps = 47/424 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH VGIGGSG+ +A++ L G+ VSGSDL S L + GA + GH +N++G D
Sbjct: 8 IHMVGIGGSGMRGIAEVLLNLGYAVSGSDLQPGSSTLRLTDLGARIFSGHEAANVRGTD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSAIP N E+ A+ +P+ +R LA+L IA++G+HGK+TT S
Sbjct: 67 -----VVVISSAIPDSNPEVQAARESRIPVIRRAEMLAELMRFKQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A +L A G D T ++G + + G G+ V EADE D FL L+P +AVVTN
Sbjct: 122 LVASILGAAGLDPTFVIGGRLKSAGTHAAL-GSGEYLVAEADESDASFLYLAPVMAVVTN 180
Query: 258 LDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H++ + D D +++ F +FL+++ G V+C D L+ +++
Sbjct: 181 IDADHMETYGDSLDNLRNAFLQFLQRLPFYGLAVLCTDEPMVAGLIPELRT--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRP----LAQ 371
++ YGF + D A +V VQG GS + + R
Sbjct: 232 ----------------PVLRYGFGADTDLQARNVT--VQGVGSHFEVWRRVDNDYVHWLD 273
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG 431
+ L IPG HNVLN+LA I + + +G Q+ ++ L+ F GV RRF+ +G G
Sbjct: 274 VELGIPGQHNVLNALAAIG-IASKVGVSEQT------IRSALADFRGVGRRFEQVGEFTG 326
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
I DD+ HHP E+ A + AAR +P++ L+ FQPH YSR L DF N+L++AD V+
Sbjct: 327 ITIVDDYGHHPRELSATISAARAVWPDRPLVVAFQPHRYSRTQALFGDFVNSLAQADLVI 386
Query: 492 VSAV 495
++ +
Sbjct: 387 LTDI 390
>gi|383753248|ref|YP_005432151.1| UDP-N-acetylmuramate-alanine ligase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365300|dbj|BAL82128.1| UDP-N-acetylmuramate-alanine ligase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 463
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 150/420 (35%), Positives = 227/420 (54%), Gaps = 43/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHI-GHSVSNIQGND 136
IHFVGIGG+G+S LAK+ ++ G+EV+GSD S ++ L + GA + + G N++G D
Sbjct: 13 IHFVGIGGAGMSPLAKIMVELGYEVTGSDRADSEVIQNLKKLGAKITLDGQKGENVKGAD 72
Query: 137 GSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
A+V S+AIP DN E+L A+ +G+ R A L +Y IAV+G+HGK+TT
Sbjct: 73 ------AIVVSTAIPYDNPEVLAARDLGIRKLHRSDINAALVNEYKGIAVAGAHGKTTTT 126
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SML L G T +VG +P +I G + EADE DG FL L P +AVVT
Sbjct: 127 SMLGVALTKAGVSPTVVVGGEMPDLGTNAIL-GESEYLTSEADESDGSFLKLHPHIAVVT 185
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQI-RVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
N++ +H+D + + + F +F++ + + G+ V+C D++ R++ +
Sbjct: 186 NVEDDHMDHYGTMENIIKAFTQFIQNVDKETGYAVLCFDNENLRNIAKTV---------- 235
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQ 375
D K TY D+ A+S+ N +G + + + L +SL
Sbjct: 236 ---------------DRKFYTYAIDHEADYTAKSIKTNGKGIA-FDVFHGEEMLGHVSLN 279
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
IPG HNVLN+LA I T L++ E +A L++F G RRF G G +
Sbjct: 280 IPGRHNVLNALACIVTGLSM----GVEFEKLAA---GLAEFHGAKRRFQTKGRANGVWVV 332
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHPTE+ A L+AA++ P K L+ VFQPH YSR +L ++F A AD ++++ +
Sbjct: 333 DDYAHHPTEIAATLKAAKELNP-KRLVCVFQPHRYSRTQLLHEEFGKAFMSADLLILTDI 391
>gi|153940015|ref|YP_001392902.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium botulinum F
str. Langeland]
gi|384463862|ref|YP_005676457.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium botulinum F
str. 230613]
gi|166222975|sp|A7GJE2.1|MURC_CLOBL RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|152935911|gb|ABS41409.1| UDP-N-acetylmuramate--alanine ligase [Clostridium botulinum F str.
Langeland]
gi|295320879|gb|ADG01257.1| UDP-N-acetylmuramate--alanine ligase [Clostridium botulinum F str.
230613]
Length = 458
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 150/434 (34%), Positives = 226/434 (52%), Gaps = 55/434 (12%)
Query: 70 DF-KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
DF K++ IHF+GIGG +S LA++ L F +SGSD+ S E L + GA ++IGH
Sbjct: 4 DFIKDKNKHIHFIGIGGISMSGLAEILLYNNFSISGSDMNSSPITEKLKDKGAKIYIGHK 63
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAV 186
NI+ D +V ++AI DN EI+ AK + + R +L L + KYN IA+
Sbjct: 64 KENIKDAD------LIVYTAAIASDNPEIIEAKEKNIKLMDRADFLGNLMKGYKYN-IAI 116
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
SG+HGK+TT SML++V D T +VG ++ +G++ G F+ EA EY FL
Sbjct: 117 SGTHGKTTTTSMLSHVALKANVDPTILVGGNL-DIINGNVRVGESDFFITEACEYKSSFL 175
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 306
P + V+ N+D +H+D ++D D +K+ F +F+K I G+LV G+ + +S++ +
Sbjct: 176 KFFPYIGVILNIDADHLDYYKDLDDIKNAFSKFIKLIPKDGYLVAYGEDKNIQSIIKEA- 234
Query: 307 QDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSS-----FNDWYAESVCPNVQGGSDYI 361
+ +ITYG +S N Y E C N +
Sbjct: 235 ------------------------NCNVITYGINSGDIQAHNIEYDEKACGN------FD 264
Query: 362 LCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSR 421
+ + + L + L +PG HN+LNSLA I L + E I F G R
Sbjct: 265 VVKDNQKLFSVKLNVPGKHNILNSLASICIGLASNMKDKDIIEGI-------ESFFGTHR 317
Query: 422 RFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFA 481
RF+L G + DD+AHHPTE+ A L AA+ ++P+ L VFQPHTYSR + L DDF
Sbjct: 318 RFELKGCKNNITVIDDYAHHPTEISATLDAAK-KYPHNKLFCVFQPHTYSRTLTLFDDFT 376
Query: 482 NALSEADQVVVSAV 495
AD+++++ +
Sbjct: 377 KCFDNADEIILADI 390
>gi|392939903|ref|ZP_10305547.1| UDP-N-acetylmuramate--alanine ligase [Thermoanaerobacter
siderophilus SR4]
gi|392291653|gb|EIW00097.1| UDP-N-acetylmuramate--alanine ligase [Thermoanaerobacter
siderophilus SR4]
Length = 464
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 144/420 (34%), Positives = 230/420 (54%), Gaps = 43/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG +S LA + L G V+GSD+ S +E L + GA + I H+ +++ G D
Sbjct: 11 VHFIGIGGISMSGLAHILLNNGHIVTGSDIKNSHIIERLRQEGAVITIPHNENSVIGAD- 69
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTTA 196
VV ++AI +DN E AK + +PI R L + +KY IAV+GSHGK+TT
Sbjct: 70 -----LVVYTAAIHEDNPEYQKAKKLNIPIIDRATLLGLIMKKYKWGIAVAGSHGKTTTT 124
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
S+++ +L G D T +VG V G++ G + FV EA EY FL P +AV+
Sbjct: 125 SLISVILDGAGFDPTVLVGGEVDVIG-GNVRVGNSEYFVTEACEYTDSFLKFYPYIAVIL 183
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N+D +H+D F++ D +K FR+F + G +V C D +++ + ++
Sbjct: 184 NVDSDHLDYFKNIDNIKQSFRQFANLVPPDGFVVACKDDANTMYVVNGLNKN-------- 235
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
I+TYG +DW A+++ + +G + + + + + + L I
Sbjct: 236 -----------------IVTYGIYQDSDWKAKNISFDDKGCAIFDVYYKEKYMGNFKLSI 278
Query: 377 PGVHNVLNSLAVIA-TVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
PG HNV N+LA +A + L I K+ SH L++F G RRF++ G + G I
Sbjct: 279 PGKHNVYNALAAMAVSHLVGIDIKKASHY--------LTEFKGTHRRFEVKGIVDGITIV 330
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHP E++A L+ A+ +P+K +I +FQPHTYSR L +DFA + AD+++++ +
Sbjct: 331 DDYAHHPAEIKATLETAKN-YPHKRIICIFQPHTYSRTKSLLNDFAESFDNADKIIIADI 389
>gi|383785025|ref|YP_005469595.1| UDP-N-acetylmuramate-L-alanine ligase [Leptospirillum ferrooxidans
C2-3]
gi|383083938|dbj|BAM07465.1| putative UDP-N-acetylmuramate-L-alanine ligase [Leptospirillum
ferrooxidans C2-3]
Length = 468
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 148/428 (34%), Positives = 219/428 (51%), Gaps = 56/428 (13%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H VGIGG+G++ +A++ L +GF V+GSD + L E GA +++G N+ D
Sbjct: 9 LHLVGIGGNGMAPIAEILLAKGFRVTGSDSYQTDLTRRLSELGATVYLGQRAENVGDVD- 67
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
AVV S+AI +N E+ A+ G+PI R L++L + V+GSHGK+TT S
Sbjct: 68 -----AVVVSTAISSENPEVQEARKRGIPIVHRGEMLSELMRGTVGVCVAGSHGKTTTTS 122
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M++ +L D T +VG V F G FV EADE DG FL L P ++VVTN
Sbjct: 123 MISTLLYLGNLDPTCVVGGRVHHF-GAHARVGKSSFFVAEADESDGSFLKLPPIISVVTN 181
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D EH+D + D +K+ F F+ + G + C D R L+ + +
Sbjct: 182 IDQEHMDFYGSYDRLKAAFLEFMNHVPFYGKVFACIDDPGVRELIGNVSR---------- 231
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE----------RGR 367
++ITYG S V GG++ I+ G
Sbjct: 232 ---------------RVITYGASP-------DAMIRVVGGAEGIVVNGLSSTFSVEGHGE 269
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
SL++PG HNV+NSLA I G R+ ++ ++ LS+F GV RRF ++G
Sbjct: 270 KWGSFSLEVPGRHNVINSLAAI-------GVGRELGMPMSEIREGLSRFRGVGRRFTIVG 322
Query: 428 TIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
G I DD+ HHPTE+ A L AA+Q FP++ L+ VFQPH YSR L+ FA+A +A
Sbjct: 323 EESGVLIVDDYGHHPTEIEATLSAAKQSFPDRRLVVVFQPHRYSRTRDLQSRFAHAFLKA 382
Query: 488 DQVVVSAV 495
+ ++++ V
Sbjct: 383 NLLILTEV 390
>gi|257791840|ref|YP_003182446.1| UDP-N-acetylmuramate--L-alanine ligase [Eggerthella lenta DSM 2243]
gi|317489841|ref|ZP_07948337.1| UDP-N-acetylmuramate-alanine ligase [Eggerthella sp. 1_3_56FAA]
gi|257475737|gb|ACV56057.1| UDP-N-acetylmuramate/alanine ligase [Eggerthella lenta DSM 2243]
gi|316911055|gb|EFV32668.1| UDP-N-acetylmuramate-alanine ligase [Eggerthella sp. 1_3_56FAA]
Length = 475
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 158/421 (37%), Positives = 226/421 (53%), Gaps = 48/421 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI-QGND 136
+HF+G+GG G+S +A++A QG VSG+DL S Y + L EAG +HIGH +NI +GN
Sbjct: 9 VHFIGVGGVGMSGIARVAFDQGMRVSGTDLKESRYTKQLREAGIEVHIGHDPANIPEGN- 67
Query: 137 GSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
+V S+AI +N E+ AK+ G+ I+ R LA L +AV+G+HGK+TT+
Sbjct: 68 -----PVIVVSTAILDNNPELAAAKARGLTIWHRAQMLAYLGRALQTLAVAGTHGKTTTS 122
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SMLA VL MG+D T ++G V + + G G ++V+EADE D F+ LSP +VT
Sbjct: 123 SMLASVLDGMGEDPTFLIGGIVRAYGTNA-HSGTGAHYVVEADESDKSFMHLSPRAVLVT 181
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQI-RVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
N++ +H+D + D D + F F+ + GG +V CG+ + L ++ + +G
Sbjct: 182 NIEADHLDHYRDLDEIYEKFASFIGSVPDDGGVVVACGEDEA----LVRVARASG----- 232
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYIL-CERGRPLAQISL 374
++ TYGFS D S PN GSD+ L G ++
Sbjct: 233 ----------------KRLFTYGFSDACDVRIASYEPNGV-GSDFTLELPDGSVVSAHVK 275
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHI 434
Q PG HNVLN+ V+ + L D Q+ E+ L+ F GV RRFDL+G G +
Sbjct: 276 QNPGRHNVLNAAGVVGLLWALGYDPAQAAEA-------LADFAGVKRRFDLVGEAGGVTV 328
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSR----LVVLKDDFANALSEADQV 490
DD+AHHPTE+ A ++AA + +FQPH YSR VLKDDF A AD V
Sbjct: 329 VDDYAHHPTEIAATIEAASH-LGFAHVHVLFQPHRYSRAPLFTEVLKDDFGRAFDAADAV 387
Query: 491 V 491
Sbjct: 388 T 388
>gi|83648521|ref|YP_436956.1| UDP-N-acetylmuramate--L-alanine ligase [Hahella chejuensis KCTC
2396]
gi|109892707|sp|Q2S9Z3.1|MURC_HAHCH RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|83636564|gb|ABC32531.1| UDP-N-acetylmuramate--alanine ligase [Hahella chejuensis KCTC 2396]
Length = 472
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 155/425 (36%), Positives = 223/425 (52%), Gaps = 48/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGGSG+ +A++ L QG+E+SGSDL S+ L + GA++ GH+ NI G
Sbjct: 17 IHFVGIGGSGMCGIAEVLLNQGYEISGSDLKESATTRRLSDMGASITFGHTAQNIAG--- 73
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
N VV SSA+ +DN E+ A +P+ R LA+L + +A++G+HGK+TT S
Sbjct: 74 ---ANVVVTSSAVAKDNPEVTAANEQRIPVIARAEMLAELMRYRHGVAIAGTHGKTTTTS 130
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL G D T ++G + + G + V EADE D FL L+P V+VVTN
Sbjct: 131 LMASVLGEAGLDPTFVIGGRLNSAGTNAKL-GASRYLVAEADESDASFLHLTPMVSVVTN 189
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ + D + +K F FL + G V+C D R ++ ++ +
Sbjct: 190 IDADHMHTYGGDFEKLKQTFVDFLHNLPFYGVAVMCYDDPVVREIIPRVGR--------- 240
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER--GRPLAQISL 374
+ITYGF+ D A + QG +R G P +ISL
Sbjct: 241 ----------------SVITYGFNEKADVRAVDIAQ--QGMQTSFTAKRPGGHPDLRISL 282
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY---- 430
+PG HNVLN+LAVIA D+ + E+I L+KF GV RRF + G
Sbjct: 283 NMPGKHNVLNALAVIAVAT----DEGIADEAIVS---ALNKFQGVGRRFQVYGNYPVDEG 335
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP EV A ++A R +P K L+AVFQPH Y+R L +DF LS+ D +
Sbjct: 336 SVMLVDDYGHHPREVDATIKAIRDGWPEKRLVAVFQPHRYTRTRDLYEDFVQVLSKVDVL 395
Query: 491 VVSAV 495
V+ V
Sbjct: 396 VLMDV 400
>gi|333978596|ref|YP_004516541.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfotomaculum
kuznetsovii DSM 6115]
gi|333822077|gb|AEG14740.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 460
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 152/419 (36%), Positives = 223/419 (53%), Gaps = 42/419 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG+G+S LA + L G+E++GSDL + L GA H+GH+ N+ D
Sbjct: 8 VHFIGIGGAGMSGLASILLDLGYEITGSDLSSTDTTRRLESRGAVCHVGHAPKNL---DT 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
++ VV SSAI DNVE+L A+ G+P+ R LA L ++ IAV+G+HGK+TT S
Sbjct: 65 TQL---VVISSAIKPDNVELLAAREKGIPVIHRGDLLAWLMQRQKGIAVAGAHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
MLA L+ G D T I+G + G+ G G+ V EADE DG FL L P +VTN
Sbjct: 122 MLALALERSGLDPTIIIGGELNDI-GGNAKLGRGEYLVAEADESDGSFLKLHPLAVIVTN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
++ +H+D + +K FR+F+ ++ G ++ C D R ++ QD G
Sbjct: 181 IEDDHLDHYGSVAEIKKAFRQFMGKVPEHGLVIACIDDPNVR----EVVQDLG------- 229
Query: 318 VSNQSSDLWGQGHDYKIITYGF-SSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+ITYG SS D+ + + +G + R + L + L +
Sbjct: 230 --------------RPVITYGIESSGADYVLRHLSLDGEGSRGEVYY-RDQRLGALELSV 274
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG HN + + + IG Q + L +F G RRF+L+G + + D
Sbjct: 275 PGKHN-MLNALAVVAAARWIGLDFQ------LIARTLKEFRGARRRFELLGEVGNMRVVD 327
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHP+E++A LQAARQ P K LI VFQPH Y+R +LK+ F A EAD V+V+ +
Sbjct: 328 DYAHHPSEIKATLQAARQTGP-KRLIVVFQPHRYTRTALLKEQFGKAFGEADLVIVNEI 385
>gi|300857309|ref|YP_003782293.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium ljungdahlii DSM
13528]
gi|300437424|gb|ADK17191.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium ljungdahlii DSM
13528]
Length = 457
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 148/429 (34%), Positives = 245/429 (57%), Gaps = 46/429 (10%)
Query: 70 DF-KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
DF KN+K +HF+GIGG +SALA++ L++G +VSGSD+ S E L GA ++IG
Sbjct: 4 DFIKNKK--VHFIGIGGVSMSALAEILLEKGSKVSGSDIKTSPATEKLKSKGATIYIGQI 61
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAV 186
NI+ + + V+ ++AI ++N E L AK++ +P+ R L + + KYN +AV
Sbjct: 62 SENIKPD-----IDLVIYTAAIQKNNEEFLKAKTLNIPLMSRAELLGHIMKGHKYN-VAV 115
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
+G+HGK+TT SML+ + D T +VG ++ +G++ G F+ EA EY G FL
Sbjct: 116 AGTHGKTTTTSMLSCITLKADLDPTILVGGNLDNI-NGNVRIGNSPYFITEACEYKGSFL 174
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 306
PS+ V+ N+D +H+D ++D D +++ F +F I G+LV C D
Sbjct: 175 KFFPSIGVILNIDADHLDYYKDIDDIQNAFIKFANLIPEKGYLVGCVD------------ 222
Query: 307 QDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERG 366
D +K V+SN + + ++TYG ++ D A+++C + + + + + +
Sbjct: 223 -DARMK---NVISNVNCN---------VLTYGINA-GDITAKNICFDEKSCASFDIYKND 268
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
++ + L +PG HN+LN+LA +T ++LI D + +K+ L F G RRF+L
Sbjct: 269 VKISSLHLNVPGKHNILNALA--STAVSLILDISTDN-----IKMGLENFKGTHRRFELK 321
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G G + DD+AHHPTE++A L AA +P+K +I VFQPHT+SR + L +F A
Sbjct: 322 GKKQGITVIDDYAHHPTEIKATLNAAIN-YPHKRIICVFQPHTFSRTISLFKEFTEAFDN 380
Query: 487 ADQVVVSAV 495
D+++++ +
Sbjct: 381 VDELILANI 389
>gi|402303432|ref|ZP_10822527.1| UDP-N-acetylmuramate--L-alanine ligase [Selenomonas sp. FOBRC9]
gi|400378676|gb|EJP31528.1| UDP-N-acetylmuramate--L-alanine ligase [Selenomonas sp. FOBRC9]
Length = 776
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 155/421 (36%), Positives = 218/421 (51%), Gaps = 46/421 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHI-GHSVSNIQGND 136
IHFVGIGG+G+S LAK+ L G+EVSGSD S +E L+ GA++ G N++G D
Sbjct: 11 IHFVGIGGAGMSPLAKILLLLGYEVSGSDQGTSPIIEELVRLGAHIRTDGQRAENVRGAD 70
Query: 137 GSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
A+V S+AIP DN E++ A + +P R A L +Y+ IAV+GSHGK+TT
Sbjct: 71 ------AIVVSTAIPYDNPEVIAAWDLRIPKLHRSDINAALVNEYDGIAVAGSHGKTTTT 124
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM+ L G T IVG VP + G + V EADE DG FL L P +AVVT
Sbjct: 125 SMIGVTLDRAGVSPTVIVGGEVPDLGTNAKL-GTSRYLVSEADESDGSFLKLRPHIAVVT 183
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D + + + FR F+ QI G V+C +++ R L
Sbjct: 184 NVEDDHMDHYGTMEKIIEAFRTFISQIDADGTAVLCYENEILRRL--------------- 228
Query: 317 VVSNQSSDLWGQGHDYKIITY--GFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISL 374
G D +++Y ++ C +V + + ERG L +ISL
Sbjct: 229 ----------GAETDRTVVSYAIDAAADYRAADIETCGSV---ISFTVFERGTALGRISL 275
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHI 434
IPG HNVLN+LA +A R + + L+ F G RRF G G +
Sbjct: 276 HIPGRHNVLNALACVAVA-------RLAGLDFDRIADALAHFHGAKRRFQTKGKERGIWV 328
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSA 494
DD+AHHPTE+ A L AARQ P + L+ VFQPH YSR +L+ +F + AD ++++
Sbjct: 329 VDDYAHHPTEIAATLAAARQTEPGR-LVCVFQPHRYSRTQLLRAEFGGCFAAADLLLLTD 387
Query: 495 V 495
V
Sbjct: 388 V 388
>gi|257092207|ref|YP_003165848.1| UDP-N-acetylmuramate/alanine ligase [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257044731|gb|ACV33919.1| UDP-N-acetylmuramate/alanine ligase [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 462
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 160/434 (36%), Positives = 227/434 (52%), Gaps = 50/434 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K++ IHFVGIGG+G+S +A++ GF VSGSDL +S L G IGH+ +
Sbjct: 1 MKHKVKNIHFVGIGGAGMSGIAEVLANLGFVVSGSDLADNSATRRLAALGVRTVIGHAAA 60
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N+ G D AVV SSA+ DN E++ A+S VP+ R LA+L IAV+G+H
Sbjct: 61 NVNGAD------AVVVSSAVRADNPEVIAARSRQVPVVPRAQMLAELMRLKQGIAVAGTH 114
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S++A +L A G D T ++G + + G G V EADE D FL LSP
Sbjct: 115 GKTTTTSLVASILAAGGMDPTFVIGGRL-NAAGANACLGSGDFLVAEADESDASFLFLSP 173
Query: 251 SVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
++VVTN+D +H++ + D + +K F FL+++ G V+C D R ++ Q+ +
Sbjct: 174 VISVVTNIDADHMETYGHDFNRLKQAFVEFLQRLPFYGVAVLCADDANVREIMPQVSK-- 231
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER---G 366
+I+TYG ++YAE+V +GG C R
Sbjct: 232 -----------------------QIVTYGLDPAANFYAENV--TAEGGQMRFDCVRVNGS 266
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
++L +PG HNVLN+LA IA V + +G A LK L+ F GV RRF
Sbjct: 267 VSRLPVTLNLPGRHNVLNALAAIA-VASEVGVADD-----AILK-ALTDFRGVGRRFQRY 319
Query: 427 GTIY----GC-HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFA 481
G I GC + DD+ HHP E+ A L AAR FP + L+ FQPH Y+R +DF
Sbjct: 320 GEIALADGGCFTLVDDYGHHPVEMSATLTAARGAFPGRRLLLAFQPHRYTRTRDRFEDFV 379
Query: 482 NALSEADQVVVSAV 495
LS D +V++ V
Sbjct: 380 KVLSGVDALVLTEV 393
>gi|168187029|ref|ZP_02621664.1| UDP-N-acetylmuramate--alanine ligase [Clostridium botulinum C str.
Eklund]
gi|169295057|gb|EDS77190.1| UDP-N-acetylmuramate--alanine ligase [Clostridium botulinum C str.
Eklund]
Length = 458
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 138/430 (32%), Positives = 235/430 (54%), Gaps = 51/430 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
++ +HF+GIGG +S LA++ L + VSGSD S + L + GA ++IGH +
Sbjct: 6 LQDNNKKVHFIGIGGISMSGLAEILLNSNYSVSGSDRSESDLTKHLKDKGAEIYIGHDGN 65
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAVSG 188
N++ D VV ++AIP +N E++ A+ + +P R +L + + KYN +A+SG
Sbjct: 66 NLKNVD------LVVYTAAIPSNNPELVKARELNIPTMDRAEFLGHVMQGHKYN-VAISG 118
Query: 189 SHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGL 248
+HGK+TT SML+++ + D T +VG ++ +G++ G + FV EA EY FL
Sbjct: 119 THGKTTTTSMLSHITLSANLDPTILVGGNLDVI-NGNVRVGNSEYFVTEACEYKASFLKF 177
Query: 249 SPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQD 308
P V ++ N++ +H+D ++D + +++ F +F K I G L++ D + ++ ++
Sbjct: 178 YPYVGIILNIEADHLDFYKDINDIQNTFLKFAKLIPSDGFLIVNADDERCIAVSKEV--- 234
Query: 309 TGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNV---QGGSDYILCER 365
D +IT+G + E N+ G + +C+
Sbjct: 235 ----------------------DCNVITFGIDN-----GEVRAKNIVFTNGHPTFDVCKN 267
Query: 366 GRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
L ++L +PG HN+L++LA I++ L+L + + + LS F G RRF++
Sbjct: 268 EEKLFTLTLNVPGTHNILDALASISSALSL-------NVPVNSIIEGLSTFNGAHRRFEI 320
Query: 426 IGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
G + G + DD+AHHPTE++A L AA+ FP+K + VFQPHTYSR + L DDF+N+ S
Sbjct: 321 KGKVDGITVVDDYAHHPTEIKAALNAAKN-FPHKRIFCVFQPHTYSRTISLFDDFSNSFS 379
Query: 486 EADQVVVSAV 495
AD +V++ +
Sbjct: 380 NADTLVLADI 389
>gi|170755790|ref|YP_001783188.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium botulinum B1
str. Okra]
gi|429246622|ref|ZP_19209932.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium botulinum
CFSAN001628]
gi|229486483|sp|B1IH05.1|MURC_CLOBK RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|169121002|gb|ACA44838.1| UDP-N-acetylmuramate--alanine ligase [Clostridium botulinum B1 str.
Okra]
gi|428756349|gb|EKX78911.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium botulinum
CFSAN001628]
Length = 458
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 148/434 (34%), Positives = 226/434 (52%), Gaps = 55/434 (12%)
Query: 70 DF-KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
DF K++ IHF+GIGG +S LA++ L F +SGSD+ S E L + GA ++IGH
Sbjct: 4 DFIKDKNKHIHFIGIGGISMSGLAEILLYNNFSISGSDMNSSPITEKLKDKGAKIYIGHK 63
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAV 186
N++ D +V ++AI DN EI+ AK + + R +L L + KYN IA+
Sbjct: 64 KENVKNAD------LIVYTAAIASDNPEIIEAKEKNIKLMDRADFLGNLMKGYKYN-IAI 116
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
SG+HGK+TT SML++V D T +VG ++ +G++ G F+ EA EY FL
Sbjct: 117 SGTHGKTTTTSMLSHVALKANVDPTILVGGNL-DIINGNVRVGESDFFITEACEYKSSFL 175
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 306
P + V+ N+D +H+D ++D D +K+ F +F+K I G+LV G+ + +S++ +
Sbjct: 176 KFFPYIGVILNIDADHLDYYKDLDDIKNAFSKFIKLIPKDGYLVAYGEDKNIQSIIKEA- 234
Query: 307 QDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSS-----FNDWYAESVCPNVQGGSDYI 361
+ +ITYG +S N Y E C N +
Sbjct: 235 ------------------------NCNVITYGINSGDIQAHNIEYDEKACGN------FD 264
Query: 362 LCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSR 421
+ + + L + L +PG HN+LNSLA I L + E I F G R
Sbjct: 265 VVKDNQKLFSVKLNVPGKHNILNSLASICIGLASDMKDKDIIEGI-------ESFFGTHR 317
Query: 422 RFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFA 481
RF+L G + DD+AHHPTE+ A L AA+ ++P+ + VFQPHTYSR + L DDF
Sbjct: 318 RFELKGCKNNITVIDDYAHHPTEISATLDAAK-KYPHNKMFCVFQPHTYSRTLTLFDDFT 376
Query: 482 NALSEADQVVVSAV 495
AD+++++ +
Sbjct: 377 KCFDNADEIILADI 390
>gi|320530969|ref|ZP_08032002.1| UDP-N-acetylmuramate--alanine ligase [Selenomonas artemidis F0399]
gi|320136834|gb|EFW28783.1| UDP-N-acetylmuramate--alanine ligase [Selenomonas artemidis F0399]
Length = 779
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 155/421 (36%), Positives = 218/421 (51%), Gaps = 46/421 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHI-GHSVSNIQGND 136
IHFVGIGG+G+S LAK+ L G+EVSGSD S +E L+ GA++ G N++G D
Sbjct: 14 IHFVGIGGAGMSPLAKILLLLGYEVSGSDQGTSPIIEELVRLGAHIRTDGQRAENVRGAD 73
Query: 137 GSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
A+V S+AIP DN E++ A + +P R A L +Y+ IAV+GSHGK+TT
Sbjct: 74 ------AIVVSTAIPYDNPEVIAAWDLRIPKLHRSDINAALVNEYDGIAVAGSHGKTTTT 127
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM+ L G T IVG VP + G + V EADE DG FL L P +AVVT
Sbjct: 128 SMIGVTLDRAGVSPTVIVGGEVPDLGTNAKL-GTSRYLVSEADESDGSFLKLRPHIAVVT 186
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D + + + FR F+ QI G V+C +++ R L
Sbjct: 187 NVEDDHMDHYGTMEKIIEAFRTFISQIDADGTAVLCYENEILRRL--------------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITY--GFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISL 374
G D +++Y ++ C +V + + ERG L +ISL
Sbjct: 232 ----------GAETDRTVVSYAIDAAADYRAADIETCGSV---ISFTVFERGTALGRISL 278
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHI 434
IPG HNVLN+LA +A R + + L+ F G RRF G G +
Sbjct: 279 HIPGRHNVLNALACVAVA-------RLAGLDFDRIADALAHFHGAKRRFQTKGKERGIWV 331
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSA 494
DD+AHHPTE+ A L AARQ P + L+ VFQPH YSR +L+ +F + AD ++++
Sbjct: 332 VDDYAHHPTEIAATLAAARQTEPGR-LVCVFQPHRYSRTQLLRAEFGGCFAAADLLLLTD 390
Query: 495 V 495
V
Sbjct: 391 V 391
>gi|149186201|ref|ZP_01864515.1| UDP-N-acetylmuramate--L-alanine ligase [Erythrobacter sp. SD-21]
gi|148830232|gb|EDL48669.1| UDP-N-acetylmuramate--L-alanine ligase [Erythrobacter sp. SD-21]
Length = 469
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 158/425 (37%), Positives = 236/425 (55%), Gaps = 45/425 (10%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G+ V GSD+ S +E L E G ++HIGH N++G
Sbjct: 9 GVIHFVGIGGIGMSGIAEVMNNLGYTVQGSDINESPTVERLREQGISVHIGHEKENVEG- 67
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
VV S+A+ + N E+ HA +P+ +R LA+L + IAV+G+HGK+TT
Sbjct: 68 -----AAVVVTSTAVRRTNPEVAHALENRIPVVRRAEMLAELMRLRSTIAVAGTHGKTTT 122
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L D T I G + Q+ + G V+EADE DG FL L ++AVV
Sbjct: 123 TSMIASLLDCGAIDPTVINGGIIEQYGSNARL-GDSDWMVVEADESDGSFLRLDGTIAVV 181
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D + D D VK F F+ + G V+C D ++++ +++
Sbjct: 182 TNIDPEHLDHYGDFDGVKDAFVEFIHNVPFYGAAVLCIDHPEVQAVIGKVR--------- 232
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS--DYILCERG---RPLA 370
D +++TYGF+ D +V P+ +GG+ D I+ +RG R +
Sbjct: 233 ---------------DRRVVTYGFNLQADICGVNVQPH-EGGNRFDVIVRQRGEEDRRIE 276
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+ L +PG HNV N+LA IA + + + + C S F GV RRF +G++
Sbjct: 277 NVCLPMPGRHNVQNALAAIAVSIEM-----GCPDEVICNG--FSSFGGVRRRFTNVGSVA 329
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
G + DD+ HHP E+RAVL+AAR+ N+ +IAV QPH Y+RL L DDF ++ +EADQV
Sbjct: 330 GATVIDDYGHHPVEIRAVLEAAREATKNR-VIAVMQPHRYTRLHDLMDDFQSSFNEADQV 388
Query: 491 VVSAV 495
++ V
Sbjct: 389 YITPV 393
>gi|258514343|ref|YP_003190565.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfotomaculum
acetoxidans DSM 771]
gi|257778048|gb|ACV61942.1| UDP-N-acetylmuramate/alanine ligase [Desulfotomaculum acetoxidans
DSM 771]
Length = 458
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 155/421 (36%), Positives = 227/421 (53%), Gaps = 46/421 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG+G+SA+A++ L+ G+ V+GSD S E L E GA + GH+ NI +
Sbjct: 8 IHFIGIGGAGMSAVAQILLELGYTVTGSDQKLSHITERLEELGAVCYAGHNAENIGDAE- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSAIP +N E A GVP+ R LA++ ++ IA++G+HGK+TT S
Sbjct: 67 -----LIVISSAIPSNNPEWQFALHKGVPVIHRGEMLARMMDRQTGIAIAGAHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A L D T ++G + G+ G G+ V EADE DG FL L P++ VVTN
Sbjct: 122 MIALTLVKNNLDPTVLIGGELTDI-GGNAKLGYGQYLVAEADESDGSFLLLRPNIIVVTN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
++ +H+D ++ E+ + F +F+++I G V+C D + + + Q+K+
Sbjct: 181 IENDHLDYYKTEEKITEAFSKFIRKIPSDGMAVLCTDDRQLKHMSTQLKRPCK------T 234
Query: 318 VSNQSSDLWGQGHDYKI---ITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISL 374
S +S+D DY I IT G S + Y E G L + L
Sbjct: 235 YSVKSTDA-----DYTIRNMITDGPKSKVEVY-----------------ENGTLLGILEL 272
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHI 434
+PG+HN+ N+LAV+A + D + E+ LS F G RRF LIG +
Sbjct: 273 LVPGLHNISNALAVVAVGRHIGLDFDKIAEA-------LSTFKGAQRRFQLIGIEKEVQV 325
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSA 494
DD+AHHP+E+RA L+AARQ + +IAVFQPH YSR L + F A +AD V+VS
Sbjct: 326 VDDYAHHPSEIRATLKAARQAHAGR-IIAVFQPHRYSRTQHLYEQFGEAFGDADVVIVSD 384
Query: 495 V 495
+
Sbjct: 385 I 385
>gi|225174456|ref|ZP_03728455.1| UDP-N-acetylmuramate/alanine ligase [Dethiobacter alkaliphilus AHT
1]
gi|225170241|gb|EEG79036.1| UDP-N-acetylmuramate/alanine ligase [Dethiobacter alkaliphilus AHT
1]
Length = 461
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 168/444 (37%), Positives = 229/444 (51%), Gaps = 52/444 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG G+SALA++ L G+ VSGSD S E L GA +H GH S + G +
Sbjct: 8 IHFIGIGGYGMSALARVLLDMGYSVSGSDQKQSKITEKLAREGAEVHQGHDKSYVDGAE- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
V+ S+AIP+ N E A G+PI+ R LA IA++G+HGK+TT S
Sbjct: 67 -----LVIYSTAIPRHNPEYAAAVQAGLPIWHRSKLLAHFLNGRFGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A VL + G D TA +G + F G+ G + V EADE D FL + S+AVVTN
Sbjct: 122 MVAKVLTSGGLDPTAFIGGVLNDF-GGNARIGRSQYVVAEADESDNSFLRYNASLAVVTN 180
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
++ +H++ +E D D + S +R+FLK I+ G ++ + Q Y G
Sbjct: 181 IEADHMEHYEGDFDLLLSGYRQFLKNIKPEGTAILYAEDQ----------------YLGD 224
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR-PLAQISLQ 375
+V + S KIITYG D+ A + P QG RG L +I L
Sbjct: 225 MVPDHLS---------KIITYGRDK-GDYRATDLRP--QGWGTRFTVRRGEAELGEIFLH 272
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
+PG HNVLN+LA + L L S A ++ L +F G RRF + +
Sbjct: 273 VPGSHNVLNALAAVVVGLEL-------GVSFADIQKGLGEFRGADRRFQFLYQKNDLLVI 325
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHPTEV+ LQAAR P + +IAVFQPH YSR DDFA + +AD+
Sbjct: 326 DDYAHHPTEVQVTLQAARSNKPRR-VIAVFQPHRYSRTQYFMDDFARSFGQADK------ 378
Query: 496 LVFWLIIFAVSSFWLIMAINSVIC 519
VF I+A S L +SV+
Sbjct: 379 -VFLHRIYAASEEPLEGVSSSVLA 401
>gi|218780970|ref|YP_002432288.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfatibacillum
alkenivorans AK-01]
gi|226711863|sp|B8FBR7.1|MURC_DESAA RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|218762354|gb|ACL04820.1| UDP-N-acetylmuramate/alanine ligase [Desulfatibacillum alkenivorans
AK-01]
Length = 456
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 155/421 (36%), Positives = 227/421 (53%), Gaps = 42/421 (9%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
+K IHFVGIGG G+S +A+L L G++VSGSD+ S + L + G ++ GH N+
Sbjct: 3 RKKYSIHFVGIGGIGMSGIAELLLNLGYQVSGSDIKESDITQRLAKLGGTIYRGHRAENV 62
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
+G D VV SSAI Q+N E A+ G+P+ R LA+L +A++G+HGK
Sbjct: 63 KGCD------VVVVSSAIRQENPETASAREQGIPVIPRAEMLAELMRLKYSVAIAGAHGK 116
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+TT S++A VL A G D T ++G + + G G+ V EADE DG FL +SPS+
Sbjct: 117 TTTTSIVADVLAAGGLDPTVVIGGKLLSIGSNAKL-GHGEFIVAEADESDGSFLKMSPSI 175
Query: 253 AVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
AVVTN+D EH+D ++D D +K F +F+ +I G V+C DS+ + L+ I +
Sbjct: 176 AVVTNIDREHMDHYKDMDEIKDAFAQFVDKIPFYGLSVLCLDSEPVQDLIPFINK----- 230
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPLAQ 371
+ +TYG ++ D A V +G S + + + L +
Sbjct: 231 --------------------RYVTYGLTTQADLQAGDVT--TEGLTSRFTVRHNKKRLGR 268
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG 431
I+L +PG+HNV NSLA IA L L + +K L GV RR + G + G
Sbjct: 269 ITLNLPGLHNVYNSLASIAVGLEL-------NVPFENIKAALESLSGVHRRLETKGKVGG 321
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+ HHPTE+R LQA +P + + +FQPH YSR L +DFA + +AD +V
Sbjct: 322 IVVMDDYGHHPTEIRTTLQAVNDSYPERRVGVIFQPHRYSRTQSLFEDFARSFYQADYLV 381
Query: 492 V 492
V
Sbjct: 382 V 382
>gi|401564218|ref|ZP_10805130.1| UDP-N-acetylmuramate--L-alanine ligase [Selenomonas sp. FOBRC6]
gi|400189068|gb|EJO23185.1| UDP-N-acetylmuramate--L-alanine ligase [Selenomonas sp. FOBRC6]
Length = 776
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 154/430 (35%), Positives = 224/430 (52%), Gaps = 48/430 (11%)
Query: 71 FKNRKGW--IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHI-GH 127
K+ KG IHFVGIGG+G+S LAK+ L G+ VSGSD S +E L+ GA + G
Sbjct: 2 LKDLKGIHNIHFVGIGGAGMSPLAKILLLLGYNVSGSDQGTSPIIEELVRLGARVSTDGQ 61
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
N++G D A+V S+AIP DN E++ A + +P R A L +Y+ IAV+
Sbjct: 62 RAENVRGAD------AIVVSTAIPYDNPEVIAAWDLRIPKLHRSDINAALVNEYDGIAVA 115
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
GSHGK+TT SM+ L +G T IVG VP + G + + EADE DG FL
Sbjct: 116 GSHGKTTTTSMIGVTLDRVGVSPTIIVGGEVPDLGTNAKL-GTSRYLISEADESDGSFLK 174
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
L P VAVVTN++ +H+D + + + FR F+ Q+ G V+C +++ R + + K+
Sbjct: 175 LRPHVAVVTNVEDDHMDHYGTMEKIIEAFRTFVDQVAEDGTAVLCFENEILRQIAAETKR 234
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS--DYILCER 365
++++Y D+ A + + GS + + ER
Sbjct: 235 -------------------------RVVSYAIDREADYRAADIETH---GSVISFTVFER 266
Query: 366 GRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
G + ++SL IPG HNVLN+LA IA R + ++ L+ F G RRF
Sbjct: 267 GTEMGRVSLNIPGRHNVLNALACIAVA-------RLAGVDFVQIRDALAGFHGAKRRFQT 319
Query: 426 IGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
G G + DD+AHHPTE+ L AAR P + LI VFQPH YSR +L+ +F +
Sbjct: 320 KGKERGVWVVDDYAHHPTEIAVTLTAARATNPAR-LICVFQPHRYSRTQLLRAEFGGCFA 378
Query: 486 EADQVVVSAV 495
AD ++++ V
Sbjct: 379 AADLLLLTDV 388
>gi|451979769|ref|ZP_21928180.1| UDP-N-acetylmuramate-L-alanine ligase [Nitrospina gracilis 3/211]
gi|451763006|emb|CCQ89380.1| UDP-N-acetylmuramate-L-alanine ligase [Nitrospina gracilis 3/211]
Length = 472
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 145/427 (33%), Positives = 227/427 (53%), Gaps = 44/427 (10%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
F + IHF+GIGG+G+S +A++ + QG++V+GSDL S+ E L +AGA +H GH+
Sbjct: 2 FLGKTRRIHFIGIGGAGMSGIAEVLINQGYDVTGSDLTRSAVTEHLEKAGATIHYGHAAE 61
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N+ VV SSA+ DNVE+ A+ +P+ +R LA+L IA++G+H
Sbjct: 62 NVADC------QVVVTSSAVKADNVEVKAAREQSIPVIRRAEMLAELMRMKYGIAIAGTH 115
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNF-VLEADEYDGCFLGLS 249
GK+TT S++ +L G D T ++G + GS G F V EADE DG FL L
Sbjct: 116 GKTTTTSLVGTLLAGGGLDPTVVIGGKLKSV--GSHAQLGQSEFLVAEADESDGSFLKLM 173
Query: 250 PSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
P+V VVT LD EH++ + D +K F F+ ++ G V+C D +SL+ +++
Sbjct: 174 PTVVVVTTLDEEHMEYYGTLDTMKEAFLNFINKVPFYGTAVLCLDEVNIQSLIPHVEK-- 231
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYI-LCERGRP 368
+ ITYG +S D+ A ++ +G + + G+P
Sbjct: 232 -----------------------RAITYGLTSQADYTARNI--RFKGLDTWFDVFHHGKP 266
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
L + PG HNVLN+LA +A + L + ++IA L +F GV RRF++
Sbjct: 267 LGTLHSVAPGRHNVLNTLAAVAVAMEL----NLTFDTIAD---ALKQFRGVQRRFEITHD 319
Query: 429 IYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
+ DD+ HHP E++A L+ R+ +P + ++ VFQPH YSR L +F ++ AD
Sbjct: 320 TEPLVVVDDYGHHPVEIQATLRTVREVWPERRMVVVFQPHRYSRTRSLMQEFWSSFHNAD 379
Query: 489 QVVVSAV 495
V+V+ +
Sbjct: 380 CVIVNDI 386
>gi|304315705|ref|YP_003850850.1| UDP-N-acetylmuramate/alanine ligase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777207|gb|ADL67766.1| UDP-N-acetylmuramate/alanine ligase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 465
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 145/419 (34%), Positives = 223/419 (53%), Gaps = 41/419 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG +S LA + L G V+GSD+ S ++ L + GA ++I H+ SN+ G
Sbjct: 11 VHFIGIGGISMSGLAHIMLNAGHIVTGSDIKDSYIIQKLKDEGAIINIPHNASNVDG--- 67
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTTA 196
N VV ++A+ +DN E++ A+ + +P R L ++ +KY I V+GSHGK+TT
Sbjct: 68 ---ANLVVYTAAVKEDNPEMIRARELNIPTIDRATLLGEIMKKYKYGIGVAGSHGKTTTT 124
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
S+++ +L+ M D T +VG V G++ G FV EA EY FL P +AV+
Sbjct: 125 SLISVLLEEMNYDPTVLVGGEVDVIG-GNVRVGKSDYFVTEACEYTDSFLKFYPYIAVIL 183
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N+D +H+D F++ D +K F +F + G +V CGD S+L +
Sbjct: 184 NVDSDHLDYFKNIDNIKQSFTQFANLVPKDGFVVACGDDSNTMSVLKNV----------- 232
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
D IIT+G S W A+++ + +G + + G + L I
Sbjct: 233 --------------DRNIITFGIDSNCTWNAKNIKFDEKGFPSFDVYYNGVFIQNFELSI 278
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
G HN+ N+LA +A V L+G +S SI + KF G RRF+ GT+ G I D
Sbjct: 279 VGKHNIYNALATLA-VCHLLGVDIKSTPSI------IKKFKGTHRRFEFKGTLDGAIIID 331
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHPTE++A L +A +P+ +I +FQPHTYSR L DFA + AD +++ +
Sbjct: 332 DYAHHPTEIKATLSSALN-YPHNRIICIFQPHTYSRTYSLLQDFATSFDNADITIITDI 389
>gi|399888061|ref|ZP_10773938.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium arbusti SL206]
Length = 458
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 149/420 (35%), Positives = 232/420 (55%), Gaps = 44/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG +S LA++ LK+G+ VSGSD+ S E L GA ++IGH SNI+
Sbjct: 13 VHFIGIGGISMSGLAQILLKRGYTVSGSDMHKSPLTEKLSALGAEVYIGHDKSNIKD--- 69
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAVSGSHGKSTT 195
N V+ ++AIP+ N EI+ AK + +P+ R +L + + KYN +A+SG+HGK+TT
Sbjct: 70 ---VNLVIYTAAIPETNPEIIEAKRLKIPMLTRAEFLGLIMKGHKYN-VAISGTHGKTTT 125
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM++++ D T +VG + +G++ G + F+ EA EY FL P + ++
Sbjct: 126 TSMISHITLKENLDPTILVGGEL-DIINGNVRTGKSEYFITEACEYKASFLKFYPYIGLI 184
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
N+D +H+D ++D + ++ F++F I G+LV D A
Sbjct: 185 LNVDADHLDYYKDINEIQDTFQKFTSLIPKDGYLVANADDIRASQ--------------- 229
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQ 375
+ S S ++ G D IIT A+S+ + +G + + + L I L
Sbjct: 230 -IASKASCNVITFGIDNGIIT----------AKSIHFDDKGCASFDVYNSNDFLFNIKLA 278
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
+PG HNVLN+LA I+ L L S+ESI LS F G RRF+ G G +
Sbjct: 279 VPGKHNVLNALASISCALIL----NISNESILN---GLSSFGGTHRRFEYKGIKNGVIVI 331
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHPTE++A L AA+ +P+K + VFQPHTYSR + L D+F+NA S+ D ++++ +
Sbjct: 332 DDYAHHPTEIKATLSAAKN-YPHKRVFCVFQPHTYSRTLTLFDEFSNAFSDTDNLILADI 390
>gi|429735407|ref|ZP_19269372.1| UDP-N-acetylmuramate--L-alanine ligase [Selenomonas sp. oral taxon
138 str. F0429]
gi|429158915|gb|EKY01441.1| UDP-N-acetylmuramate--L-alanine ligase [Selenomonas sp. oral taxon
138 str. F0429]
Length = 779
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 156/430 (36%), Positives = 223/430 (51%), Gaps = 48/430 (11%)
Query: 71 FKNRKGW--IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHI-GH 127
K+ KG IHFVGIGG+G+S LAK+ L G+ VSGSD S + L+ GA + G
Sbjct: 5 LKDLKGIHNIHFVGIGGAGMSPLAKILLLLGYNVSGSDQGTSPIIAELVRLGARVSTDGQ 64
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
N++G D A+V S+AIP DN E++ A + +P R A L +Y+ IAV+
Sbjct: 65 RAENVRGAD------AIVVSTAIPYDNPEVIAAWDLRIPKLHRSDINAALVNEYDGIAVA 118
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
GSHGK+TT SM+ L +G T IVG VP + G + V EADE DG FL
Sbjct: 119 GSHGKTTTTSMIGVTLDRVGVSPTIIVGGEVPDLGTNAKL-GTSRYLVSEADESDGSFLK 177
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
L P VAVVTN++ +H+D + + + FR F+ Q+ G V+C +++ R + Q K+
Sbjct: 178 LRPHVAVVTNVEDDHMDHYGTMEKIIEAFRTFVDQVDEDGTAVLCFENEFLRQIAAQTKR 237
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS--DYILCER 365
++I+Y D+ A + + GS + + ER
Sbjct: 238 -------------------------RVISYAIDREADYRAADIETH---GSVISFTVFER 269
Query: 366 GRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
G + ++SL IPG HNVLN+LA IA R + ++ L+ F G RRF
Sbjct: 270 GTEMGRVSLNIPGRHNVLNALACIAVA-------RLAGVDFVQIRDALAGFHGAKRRFQT 322
Query: 426 IGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
G G + DD+AHHPTE+ L AAR P + LI VFQPH YSR +L+ +F +
Sbjct: 323 KGKERGVWVVDDYAHHPTEIAVTLTAARATNPAR-LICVFQPHRYSRTQLLRAEFGGCFA 381
Query: 486 EADQVVVSAV 495
AD ++++ V
Sbjct: 382 AADLLLLTDV 391
>gi|304310319|ref|YP_003809917.1| UDP-N-acetylmuramate--L-alanine ligase [gamma proteobacterium HdN1]
gi|301796052|emb|CBL44256.1| UDP-N-acetylmuramate-L-alanine ligase [gamma proteobacterium HdN1]
Length = 480
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 156/441 (35%), Positives = 222/441 (50%), Gaps = 49/441 (11%)
Query: 62 KRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGA 121
+R+ + R IHFVGIGG+G+ +A++ L QG+ +SGSD S+ E L GA
Sbjct: 6 RRSRTIEIPEMRRIRRIHFVGIGGAGMCGIAEVLLNQGYLISGSDQKVSANTERLKAQGA 65
Query: 122 NLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY 181
+HIGH+ N+ G D +V S+AI N E+ A+ +P+ R L +L
Sbjct: 66 VIHIGHAAKNVDGTD------VIVVSTAIDSANPELDAARERRIPVVPRAEMLGELMRYR 119
Query: 182 NLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEY 241
IAV+G+HGK+TT S++A +L G D T ++G + + G G+ V EADE
Sbjct: 120 YGIAVAGTHGKTTTTSLIASILAEGGSDPTFVIGGRLNSAGTNAKL-GTGRFLVAEADES 178
Query: 242 DGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARS 300
D FL L P V+VVTN+D++H+ + D + +K F RFL + G V+C D R
Sbjct: 179 DASFLHLQPMVSVVTNIDFDHMSTYNGDFNRLKETFLRFLHNLPFYGLAVLCVDDPTIRE 238
Query: 301 LLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDY 360
+L QI + ++TYG D A + NV S Y
Sbjct: 239 ILPQISR-------------------------PVVTYGIDHEADIQAVDI-QNVGLQSTY 272
Query: 361 ILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIA--CLKLPLSKFMG 418
+ R I+L IPG HNVLNSLA IA S E+IA + L KF G
Sbjct: 273 RVLRRDAESLSITLNIPGRHNVLNSLAAIAVA---------SDENIAGDAIARALEKFQG 323
Query: 419 VSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
V RRF + G I + DD+ HHP EV A + A RQ +P++ L+ ++QPH YSR
Sbjct: 324 VGRRFQIQGEIPIMGGTVTLVDDYGHHPREVAATIAAVRQSWPSRRLVMIYQPHRYSRTR 383
Query: 475 VLKDDFANALSEADQVVVSAV 495
L +DF LS+ D +++ V
Sbjct: 384 DLYEDFVQVLSDVDVLLLMEV 404
>gi|433653896|ref|YP_007297604.1| UDP-N-acetylmuramate--L-alanine ligase [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433292085|gb|AGB17907.1| UDP-N-acetylmuramate--L-alanine ligase [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 465
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 145/419 (34%), Positives = 223/419 (53%), Gaps = 41/419 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG +S LA + L G V+GSD+ S ++ L + GA ++I H+ SN+ G
Sbjct: 11 VHFIGIGGISMSGLAHIMLNAGHIVTGSDIKDSYIIQKLKDEGAIINIPHNASNVDG--- 67
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTTA 196
N VV ++A+ +DN E++ A+ + +P R L ++ +KY I V+GSHGK+TT
Sbjct: 68 ---ANLVVYTAAVKEDNPEMIRARELNIPTIDRATLLGEIMKKYKYGIGVAGSHGKTTTT 124
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
S+++ +L+ M D T +VG V G++ G FV EA EY FL P +AV+
Sbjct: 125 SLISVLLEEMNYDPTVLVGGEVDVIG-GNVRVGKSDYFVTEACEYTDSFLKFYPYIAVIL 183
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N+D +H+D F++ D +K F +F + G +V CGD S+L +
Sbjct: 184 NVDSDHLDYFKNIDNIKQSFTQFASLVPKDGFVVACGDDSNTMSVLKNV----------- 232
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
D IIT+G S W A+++ + +G + + G + L I
Sbjct: 233 --------------DRNIITFGIDSNCTWNAKNIKFDEKGFPSFDVYYNGVFIQNFELSI 278
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
G HN+ N+LA +A V L+G +S SI + KF G RRF+ GT+ G I D
Sbjct: 279 VGKHNIYNALATLA-VCHLLGVDIKSTPSI------IKKFKGTHRRFEFKGTLDGAIIID 331
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHPTE++A L +A +P+ +I +FQPHTYSR L DFA + AD +++ +
Sbjct: 332 DYAHHPTEIKATLSSALN-YPHNRIICIFQPHTYSRTYSLLQDFATSFDNADITIITDI 389
>gi|336321095|ref|YP_004601063.1| UDP-N-acetylmuramate/alanine ligase [[Cellvibrio] gilvus ATCC
13127]
gi|336104676|gb|AEI12495.1| UDP-N-acetylmuramate/alanine ligase [[Cellvibrio] gilvus ATCC
13127]
Length = 894
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 152/423 (35%), Positives = 223/423 (52%), Gaps = 35/423 (8%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G +H +G+GG+G+SA+A L +G +VSGSD + GL+EAG + +GH + ++G
Sbjct: 428 GRVHLIGVGGAGMSAVALLLAARGLDVSGSDAAQGPALPGLVEAGVTVTVGHDAALVEGV 487
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D VV SSA+ + N E+ A++ G+ + R LA L + +AV+G+HGK+TT
Sbjct: 488 D------TVVVSSAVRETNPELAAARAAGLRVLHRSQALAALMADRDAVAVAGAHGKTTT 541
Query: 196 ASMLAYVLKAMGDDLTAIVGAHV--PQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
++M A L A G D + +G V + P G G G+ FV EADE DG FL +P VA
Sbjct: 542 SAMTATGLLAAGADPSYAIGGTVLTERGPAGGARDGAGRAFVAEADESDGSFLAYAPLVA 601
Query: 254 VVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 313
VVTN++ +H+D + +A ++ F F ++IR GG LV C D + A L+ ++ + +
Sbjct: 602 VVTNVEPDHLDHYGTREAFEAAFVAFARRIRPGGLLVACADDEGAARLVAGVRDELAAR- 660
Query: 314 SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQ-I 372
D + TYG + D + P +GG D + R Q I
Sbjct: 661 -----------------DVAVRTYGRTPDADVRVGEMRPT-EGGWDVDVTTRDEAGPQTI 702
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC 432
L PG HN LN+ A + L Q+ E+I F G RRF+L GT G
Sbjct: 703 GLAFPGAHNALNATAAWIACVRLGVAPAQAAEAIGT-------FRGTGRRFELRGTAAGV 755
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+ DD++HHPTEVRA+L AR + ++ +FQPH YSR +F AL +AD VVV
Sbjct: 756 RVVDDYSHHPTEVRALLDGARAVVGDGRVLVLFQPHLYSRTRTFAAEFGAALDQADLVVV 815
Query: 493 SAV 495
+ V
Sbjct: 816 TDV 818
>gi|288818598|ref|YP_003432946.1| UDP-N-acetylmuramate--L-alanine ligase [Hydrogenobacter
thermophilus TK-6]
gi|384129352|ref|YP_005511965.1| UDP-N-acetylmuramate--L-alanine ligase [Hydrogenobacter
thermophilus TK-6]
gi|288787998|dbj|BAI69745.1| UDP-N-acetylmuramate--L-alanine ligase [Hydrogenobacter
thermophilus TK-6]
gi|308752189|gb|ADO45672.1| UDP-N-acetylmuramate/alanine ligase [Hydrogenobacter thermophilus
TK-6]
Length = 452
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 150/426 (35%), Positives = 228/426 (53%), Gaps = 42/426 (9%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
F+ + HFVGIGG G+S +A++ L+ G+EVSGSD+ + E L + GA + IGH
Sbjct: 2 FREKIKRFHFVGIGGIGMSGIAQVLLEMGYEVSGSDIRENKNTELLRKKGARVFIGHRAE 61
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N+ D V+ SSA+ + N EI+ AK +G+P+ R LA+L IAV GSH
Sbjct: 62 NVNSVD------VVIYSSAVSESNPEIVQAKKMGIPVIPRGDMLAELFRLKEGIAVCGSH 115
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT SM+A+++ G D T I+G + +F + G + + EADE DG FL L P
Sbjct: 116 GKTTTTSMIAHMVHEAGYDPTVIIGGVLQKFGSNARL-GKDQLIISEADESDGSFLKLLP 174
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
+VAV+TN+D EH+ ++D D +KS F RF + G V+ D + +R ++ +K
Sbjct: 175 TVAVITNIDREHLGYYKDLDEIKSAFLRFANSVPFYGFCVMNADDENSREVMKSVKA--- 231
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS-DYILCERGRPL 369
+IT+G A ++ +++GG + L G+PL
Sbjct: 232 ----------------------PLITFGIEREAHLMARNL--SLEGGCYSFDLFYEGKPL 267
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
+I + + G HNV N+LA IA L + S++ +K L F RR + G
Sbjct: 268 TRIHMSVAGRHNVYNALAGIAVCLRM-------GISVSNIKKALESFKNAERRLEFKGYF 320
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
G +YDD+ HHPTE+RAV++A R+ + + ++ VFQPH YSR L DF L EAD
Sbjct: 321 KGAAVYDDYGHHPTEIRAVIKALREMYLQRRIVLVFQPHRYSRTYYLFKDFVEVLKEADV 380
Query: 490 VVVSAV 495
+++ +
Sbjct: 381 CLLTDI 386
>gi|198282524|ref|YP_002218845.1| UDP-N-acetylmuramate--L-alanine ligase [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218667206|ref|YP_002424714.1| UDP-N-acetylmuramate--L-alanine ligase [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|415992440|ref|ZP_11560136.1| UDP-N-acetylmuramate--alanine ligase [Acidithiobacillus sp.
GGI-221]
gi|226706334|sp|B5ELC2.1|MURC_ACIF5 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|226711856|sp|B7J3V1.1|MURC_ACIF2 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|198247045|gb|ACH82638.1| UDP-N-acetylmuramate/alanine ligase [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218519419|gb|ACK80005.1| UDP-N-acetylmuramate--alanine ligase [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|339835352|gb|EGQ63037.1| UDP-N-acetylmuramate--alanine ligase [Acidithiobacillus sp.
GGI-221]
Length = 464
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 153/417 (36%), Positives = 226/417 (54%), Gaps = 37/417 (8%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH VGIGGSG+ +A++ L G+ VSGSDL + L + GA + GH +N++G D
Sbjct: 8 IHMVGIGGSGMRGIAEVLLNLGYAVSGSDLRPGNSTLRLTDLGARIFSGHEAANVRGAD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSAIP+ N E+ A+ + +P+ +R LA+L IA++G+HGK+TT S
Sbjct: 67 -----VVVISSAIPESNPEVQAARELRIPVIRRAEMLAELMRFKQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A +L A G D T ++G + + G G+ V EADE D FL LSP +AVVTN
Sbjct: 122 LVASILGAGGLDPTFVIGGRLKSAGTHAAL-GSGEYLVAEADESDASFLYLSPVMAVVTN 180
Query: 258 LDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H++ + D ++ F +FL+++ G V+C D L+ +++ L+Y G
Sbjct: 181 IDADHMETYGGSLDNLRGAFLQFLQRLPFYGLAVLCTDEAVVAGLIPELRTPV-LRYGFG 239
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+DL Q D + G S F W + SDY+ + L I
Sbjct: 240 A----DADL--QARDVTVQGIG-SRFAVWR--------RVDSDYVHW------LDVELGI 278
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG HNVLN+LA I I K ES + L+ F GV RRF+L+GT G + D
Sbjct: 279 PGRHNVLNALAAIG-----IASKVGIPES--TIATALADFRGVGRRFELVGTFDGITVVD 331
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVS 493
D+ HHP E+ A + AAR +P + L+ FQPH YSR L DF ++L+ AD+V+++
Sbjct: 332 DYGHHPREIAATIAAARSVWPERPLVVAFQPHRYSRTQALFADFVSSLAAADRVILT 388
>gi|83816151|ref|YP_444704.1| UDP-N-acetylmuramate--L-alanine ligase [Salinibacter ruber DSM
13855]
gi|109892736|sp|Q2S527.1|MURC_SALRD RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|83757545|gb|ABC45658.1| UDP-N-acetylmuramate--alanine ligase [Salinibacter ruber DSM 13855]
Length = 475
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 144/420 (34%), Positives = 228/420 (54%), Gaps = 43/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H VGIGG G+S++A++ L +G++V+GSDL S E L GA +H GH+ + D
Sbjct: 16 VHMVGIGGIGMSSIAEVLLNRGYDVTGSDLERSDVTERLEAEGATIHEGHAAEQVGTAD- 74
Query: 138 SRFPNAVVASSAI-PQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
VV SSA+ P +N E A+ + + R L +L + V+G+HGK+TT
Sbjct: 75 -----VVVYSSAVDPDENPETREAERRRISLIPRAEMLGELIRMKFGVGVAGTHGKTTTT 129
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM V+ G D T IVG V F +I G G V+EADEYD FL L+PS+AV+T
Sbjct: 130 SMAGLVVAEGGFDPTVIVGGKVTAFGSNAI-TGEGDVLVIEADEYDRTFLRLTPSLAVIT 188
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+++ +H+D++ED A+++ F ++ + G ++C D ++++ +++
Sbjct: 189 SIEEDHLDVYEDLAAIQASFTQYANSVPFFGAAILCLDDPNVQAIVGDVER--------- 239
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPLAQISLQ 375
+++TYG + + E+V +G + + + RG L I L
Sbjct: 240 ----------------RVVTYGTTRQAEVRGENV--RREGMTTRFDVVVRGERLGTIELH 281
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
+PG+HNV N+LA +A +G + + S ++ L F GV RRF+ G + G +
Sbjct: 282 VPGMHNVRNALAAVA-----VGQELEI--SFERVRDGLGTFTGVRRRFEKKGEVGGITVL 334
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHPTE+ A L AA Q FP++ ++AVFQPH YSR D+FA + AD +V++ V
Sbjct: 335 DDYAHHPTEIEATLDAAHQGFPDRRVVAVFQPHMYSRTQNFMDEFACSFFNADMLVLTDV 394
>gi|295695332|ref|YP_003588570.1| UDP-N-acetylmuramate--L-alanine ligase [Kyrpidia tusciae DSM 2912]
gi|295410934|gb|ADG05426.1| UDP-N-acetylmuramate/alanine ligase [Kyrpidia tusciae DSM 2912]
Length = 466
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 153/419 (36%), Positives = 227/419 (54%), Gaps = 43/419 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HFVGIGG G+SALA++ L VSGSD+ ++ + L+ GA + IGH + + G D
Sbjct: 8 VHFVGIGGYGMSALARVLLDWHISVSGSDVAANALTDELVRRGAVIAIGHRANQVDGAD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSA+ DN E++ A+ GV I R LA++ + IAV+G+HGK+TT+S
Sbjct: 67 -----CVVYSSAVSPDNPELVEARRRGVRILHRSELLAEILQAKKGIAVAGAHGKTTTSS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A+V+ G D T IVG + + + G G V EADE DG FL P VAVVTN
Sbjct: 122 MIAFVMNQAGLDPTYIVGGVISNLGENAK-AGLGPYAVAEADESDGTFLNYHPYVAVVTN 180
Query: 258 LDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
++ +H++ + + + ++ ++RFL Q+R GG V+C D
Sbjct: 181 IEPDHLENYGGKFENLRGAYKRFLGQVREGGLAVLCADDP-------------------- 220
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+SN S L G + + YGFSS DW A+ V + G S + R + ++L +
Sbjct: 221 ELSNLGSQLAG-----RTVWYGFSSGADWTAQDVDLH-DGHSRCRVFYRREHVGDLTLSV 274
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG HN+ ++LA IA R++ + + LS F G RRF I + G I D
Sbjct: 275 PGRHNISDALAAIAVC-------REAGIPFSTIAEILSSFRGAKRRFQQIADVAGVLIVD 327
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHPTE+ A L AAR + ++AVFQP Y+R L D F+ A +AD+V+++ +
Sbjct: 328 DYAHHPTEIEATLAAART--TGRRIVAVFQPQRYTRTHFLLDQFSYAFKDADEVIITDI 384
>gi|344200895|ref|YP_004785221.1| UDP-N-acetylmuramate--L-alanine ligase [Acidithiobacillus
ferrivorans SS3]
gi|343776339|gb|AEM48895.1| UDP-N-acetylmuramate--L-alanine ligase [Acidithiobacillus
ferrivorans SS3]
Length = 464
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 155/426 (36%), Positives = 228/426 (53%), Gaps = 37/426 (8%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
+N IH VGIGGSG+ +A++ L G+ VSGSDL L + GA + GH +
Sbjct: 1 MRNWVRQIHMVGIGGSGMRGIAEVLLNLGYAVSGSDLRPGGSTLRLTDLGARIFSGHEAA 60
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N++G D VV SSAIP+ N E+ A+ + +P+ +R LA+L IA++G+H
Sbjct: 61 NVRGAD------VVVISSAIPESNPEVQAARELRIPVIRRAEMLAELMRFKQGIAIAGTH 114
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S++A +L A G D T ++G + + G G+ V EADE D FL LSP
Sbjct: 115 GKTTTTSLVASILGAGGLDPTFVIGGRLKSAGTHAAL-GSGEYLVAEADESDASFLYLSP 173
Query: 251 SVAVVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
+AVVTN+D +H++ + D D ++ F +FL+++ G V+C D L+ ++
Sbjct: 174 VMAVVTNIDADHMETYGDSLDNLRGAFLQFLQRLPFYGLAVLCTDEPMVAGLIPELHTPV 233
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPL 369
L+Y G +DL Q D + G S F W + SDY+
Sbjct: 234 -LRYGFG----DDADL--QARDVTVHGIG-SRFAVWR--------RVNSDYVHW------ 271
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
+ L IPG HNVLN+LA I I K ES + L+ F GV RRF+L+GT
Sbjct: 272 LDVELGIPGHHNVLNALAAIG-----IASKVGIQES--TIATALADFRGVGRRFELVGTF 324
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
G + DD+ HHP E+ A + AAR +P + L+ FQPH YSR L DF ++L+ AD+
Sbjct: 325 DGITVVDDYGHHPREIAATIAAARSVWPERPLVLAFQPHRYSRTQALFADFVSSLAAADR 384
Query: 490 VVVSAV 495
V+++ +
Sbjct: 385 VILTDI 390
>gi|197124217|ref|YP_002136168.1| UDP-N-acetylmuramate--L-alanine ligase [Anaeromyxobacter sp. K]
gi|220918997|ref|YP_002494301.1| UDP-N-acetylmuramate--L-alanine ligase [Anaeromyxobacter
dehalogenans 2CP-1]
gi|229486422|sp|B4UES2.1|MURC_ANASK RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|254763735|sp|B8J8E9.1|MURC_ANAD2 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|196174066|gb|ACG75039.1| UDP-N-acetylmuramate/alanine ligase [Anaeromyxobacter sp. K]
gi|219956851|gb|ACL67235.1| UDP-N-acetylmuramate/alanine ligase [Anaeromyxobacter dehalogenans
2CP-1]
Length = 458
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 147/426 (34%), Positives = 229/426 (53%), Gaps = 43/426 (10%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
F++R+ IHFVG+GG G+S +A++ L G+ VSGSDL S L G + GH+
Sbjct: 4 FRSRQAKIHFVGVGGIGMSGIAEVLLNLGYTVSGSDLRESETTRRLAGLGGRISYGHAAE 63
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N+ D VV SSA+ +DN E+L A+ +P+ R LA+L +A++GSH
Sbjct: 64 NVLQVD------VVVISSAVKRDNPEVLEARRRKIPVIPRAEMLAELMRLKYGVAIAGSH 117
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT SM A++L G D TA+VG V F + G G V+EADE DG FL + P
Sbjct: 118 GKTTTTSMAAHLLAHAGLDPTAVVGGKVNAFGSNAKL-GKGDYMVVEADESDGSFLRIPP 176
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
++A+VTN+D EH+D ++ DA++ F F+ ++ G ++C D +S+L +++
Sbjct: 177 TIAIVTNIDPEHLDHWKTPDALRRGFVDFVNRVPFYGLAILCIDHPTVQSILPDVEK--- 233
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS-DYILCERGRPL 369
+ +TYG S D+ AE++ + G + + R L
Sbjct: 234 ----------------------RAVTYGESHQADYRAEAI--ELSGHAVRFDAFRRDEAL 269
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
+ + + G HN LN+LAVIA +GD+ + + L F GV RRF + G
Sbjct: 270 GRFEVAMVGRHNALNALAVIA-----LGDEMGIPPLVT--REALRSFQGVQRRFTVRGEA 322
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
G + DD+ HHP EV+A LQ AR+ F + ++ +FQPH Y+R L +FA A ++AD
Sbjct: 323 AGVTVVDDYGHHPAEVKATLQGAREAFKRR-VVCLFQPHRYTRTRDLMAEFATAFNDADV 381
Query: 490 VVVSAV 495
++++ +
Sbjct: 382 LLLTDI 387
>gi|390455675|ref|ZP_10241203.1| UDP-N-acetylmuramate--L-alanine ligase [Paenibacillus peoriae KCTC
3763]
Length = 460
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 144/423 (34%), Positives = 228/423 (53%), Gaps = 51/423 (12%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG G+SA+A++ L+ G+ V+GSD+ E L GA ++IGH+ +I G D
Sbjct: 8 VHFIGIGGYGMSAIARVMLEMGYTVTGSDVASQELTEKLAAKGAKIYIGHTPEHIAGAD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV S+A+ +DNVE + A+ + +P R LA+L + +AV+G+HGK+TT+S
Sbjct: 67 -----IVVYSTALSRDNVERVAAEELNIPTLHRSQMLARLLNERKGVAVAGAHGKTTTSS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVT 256
M+A V++ D T I+G + G+ G FV+ EADE DG FL P +VT
Sbjct: 122 MIALVMERCNVDPTYIIGGEITNL--GTNAKAGKSEFVVAEADESDGSFLQYHPWQGIVT 179
Query: 257 NLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
N++ +H++ ++ D + +KS + +FL QIR G ++C D Q R ++ Q++
Sbjct: 180 NIEADHLENYDGDFNRLKSAYVQFLSQIRPDGAAIVCADDQNIREMIPQLQT-------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS---DYILCERGRPLAQI 372
++ITYG D+ A ++Q G + + +G L I
Sbjct: 232 -----------------RVITYGVEHEADYMA----TDIQLGDRRLSFTMSRKGTELGTI 270
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC 432
L +PG HN+ N++A + + L + + IA L +F G RRF ++G
Sbjct: 271 ELSVPGRHNMYNAMATVISCL----EAGIPFDQIAASIL---EFHGAKRRFQVLGESNDI 323
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+ DD+AHHPTE+ A + AAR +IAVFQP YSR L D F+ A SEA++V++
Sbjct: 324 LVIDDYAHHPTEIEATISAARA--TGNRIIAVFQPQRYSRTFFLLDAFSRAFSEANEVII 381
Query: 493 SAV 495
+ +
Sbjct: 382 TDI 384
>gi|170760239|ref|YP_001788888.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium botulinum A3
str. Loch Maree]
gi|229486484|sp|B1KTF0.1|MURC_CLOBM RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|169407228|gb|ACA55639.1| UDP-N-acetylmuramate--alanine ligase [Clostridium botulinum A3 str.
Loch Maree]
Length = 458
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 148/434 (34%), Positives = 226/434 (52%), Gaps = 55/434 (12%)
Query: 70 DF-KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
DF K++ IHF+GIGG +S LA++ L F +SGSD+ S E L + GA ++IGH
Sbjct: 4 DFIKDKNKHIHFIGIGGISMSGLAEILLYNNFSISGSDMNSSPITEKLKDKGAKIYIGHK 63
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAV 186
N++ D +V ++AI DN EI+ AK + + R +L L + KYN IA+
Sbjct: 64 KENVKDAD------LIVYTAAIASDNPEIIEAKEKNIKLMDRADFLGNLMKGYKYN-IAI 116
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
SG+HGK+TT SML++V D T +VG ++ +G++ G F+ EA EY FL
Sbjct: 117 SGTHGKTTTTSMLSHVALKANVDPTILVGGNL-DIINGNVRVGESDFFITEACEYKSSFL 175
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 306
P + V+ N+D +H+D ++D D +K+ F +F+K I G+LV G+ + +S++ +
Sbjct: 176 KFFPYIGVILNIDADHLDYYKDLDDIKNAFSKFIKLIPKDGYLVAYGEDKNIQSIIKEA- 234
Query: 307 QDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSS-----FNDWYAESVCPNVQGGSDYI 361
+ +ITYG +S N Y E C N +
Sbjct: 235 ------------------------NCNVITYGINSGDIQAHNIEYDEKACGN------FD 264
Query: 362 LCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSR 421
+ + + L + L +PG HN+LNSLA I L + E I F G R
Sbjct: 265 VFKDNQKLFSVKLNVPGKHNILNSLASICIGLASDMKDKDIIEGI-------ESFFGTHR 317
Query: 422 RFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFA 481
RF+L G + DD+AHHPTE+ A L AA+ ++P+ + VFQPHTYSR + L DDF
Sbjct: 318 RFELKGCKNNITVIDDYAHHPTEISATLDAAK-KYPHNKMFCVFQPHTYSRTLTLFDDFT 376
Query: 482 NALSEADQVVVSAV 495
AD+++++ +
Sbjct: 377 KCFDNADEIILADI 390
>gi|108759161|ref|YP_633742.1| UDP-N-acetylmuramate--L-alanine ligase [Myxococcus xanthus DK 1622]
gi|123374163|sp|Q1D0T1.1|MURC_MYXXD RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|108463041|gb|ABF88226.1| UDP-N-acetylmuramate--alanine ligase [Myxococcus xanthus DK 1622]
Length = 472
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 150/427 (35%), Positives = 226/427 (52%), Gaps = 44/427 (10%)
Query: 71 FKNRKG-WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSV 129
FK R +HFVG+GG G+S +A++ L G+ VSGSDL S L+ GA GH
Sbjct: 10 FKTRHAAQVHFVGLGGIGMSGIAEVLLNLGYRVSGSDLRESDITRRLVRMGATFFEGHRA 69
Query: 130 SNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGS 189
N+ D VV SSA+ +DN E++ A+ +P+ R LA+L +AV+GS
Sbjct: 70 QNLIQAD------VVVISSAVRKDNPEVVAARQRKIPVIPRAEMLAELMRLKYAVAVAGS 123
Query: 190 HGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLS 249
HGK+TT SM+A VL A G D TA+VG V D + G + V+EADE DG FL L
Sbjct: 124 HGKTTTTSMVATVLSAAGLDPTAVVGGKV-NVLDSNAKLGKSELMVVEADESDGSFLHLH 182
Query: 250 PSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
PS+A+VTN+D EH+D + D D ++S F F ++ G V+C D+ ++LL +I++
Sbjct: 183 PSIAIVTNIDPEHMDHYGDLDTLQSAFVEFCNRVPFYGLNVLCLDNPNVQALLPRIEK-- 240
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRP 368
+ +TYG S D+ E++ + G + + R
Sbjct: 241 -----------------------RFVTYGSSHMADYRLENI--QLDGFTTRFNAYRREES 275
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
L + +++ G HN N+LAVIA + + ++ L++F GV RRF + G
Sbjct: 276 LGEFRVRMVGAHNAFNALAVIAVA-------EEMDIPLETVRESLAEFGGVQRRFTVRGE 328
Query: 429 IYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
G + DD+ HHPTEV A L AR+ F + ++A FQPH Y+R L +F + +++D
Sbjct: 329 AQGITVVDDYGHHPTEVLATLAGARRAFGRRVVVA-FQPHRYTRTHDLMKEFTTSFNDSD 387
Query: 489 QVVVSAV 495
+ V++V
Sbjct: 388 VLFVTSV 394
>gi|78044616|ref|YP_360887.1| UDP-N-acetylmuramate--L-alanine ligase [Carboxydothermus
hydrogenoformans Z-2901]
gi|109892698|sp|Q3AAE7.1|MURC_CARHZ RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|77996731|gb|ABB15630.1| UDP-N-acetylmuramate--alanine ligase [Carboxydothermus
hydrogenoformans Z-2901]
Length = 464
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 147/422 (34%), Positives = 224/422 (53%), Gaps = 48/422 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+ IGG G+S LA++ +G+ VSGSDL + + L G + IGH N+ +
Sbjct: 18 VHFIAIGGIGMSGLARILQSKGYRVSGSDLKETELTKKLRAEGITVFIGHREENLASD-- 75
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ VV S+A+ QDN E+L AK +G+P+ R LA+L ++ IAV+G+HGK+TT+S
Sbjct: 76 ---VSLVVVSTAVSQDNPELLKAKRLGIPVMHRGELLARLMQEKKGIAVAGTHGKTTTSS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+AYVL+ G D VG + + G G+ V EADE DG FL L P AV+TN
Sbjct: 133 MIAYVLEKEGFDPVIAVGGEIVDLGYNAKA-GQGEYMVAEADESDGSFLKLLPYAAVITN 191
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
++ +H+D ++ + +K F++F IR G V C D+ R +L
Sbjct: 192 IEADHLDYYQSFEEIKKAFKKFADNIRPEGFGVFCWDNLQVREML--------------- 236
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDW----YAESVCPNVQGGSDYILCERGRPLAQIS 373
+G+ + TYGFS +D+ Y E V + + ++
Sbjct: 237 ----------KGYKKRKFTYGFSPGSDFMLRDYREEQNQLVAN-----IYYKNTLEGELR 281
Query: 374 LQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH 433
L++PG HN+LN+ A A VL IG S + L +F G RRF ++G G
Sbjct: 282 LKVPGKHNILNAAAATA-VLRNIG------LSFKAISERLLEFNGAKRRFQILGERNGAL 334
Query: 434 IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVS 493
I DD+AHHPTEV A L+AA+ + ++ ++ VFQPH Y+R +FA L +A++VV++
Sbjct: 335 IVDDYAHHPTEVEATLRAAKL-YKDRDVLVVFQPHRYTRTHFFYKEFARVLVDAEKVVLT 393
Query: 494 AV 495
+
Sbjct: 394 GI 395
>gi|21672874|ref|NP_660939.1| UDP-N-acetylmuramate--L-alanine ligase [Chlorobium tepidum TLS]
gi|25453121|sp|Q8KGD5.1|MURC_CHLTE RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|21645925|gb|AAM71281.1| UDP-N-acetylmuramate--alanine ligase [Chlorobium tepidum TLS]
Length = 475
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 151/421 (35%), Positives = 227/421 (53%), Gaps = 44/421 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H VGIGG+G+SA+A+L LK GF VSGSDL ++ L E GA +H GH N+ +D
Sbjct: 12 VHIVGIGGAGMSAIAELLLKSGFAVSGSDLASGEVIDKLRELGAVIHQGHQAENVGASD- 70
Query: 138 SRFPNAVVASSAI-PQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
VV SSA+ P+ NVEIL A+ +G+P+ KRD L +L + I VSG+HGK+TT
Sbjct: 71 -----VVVYSSAVRPESNVEILAAQKLGIPVIKRDEMLGELMRHKSGICVSGTHGKTTTT 125
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
+M+A +L G T ++G V + GS G GK+ V+EADEYD FL L+P++AV+
Sbjct: 126 AMVATMLLEAGQSPTVMIGG-VSDYLKGSTVVGEGKSMVIEADEYDRAFLKLTPTIAVLN 184
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+L+ EH+D + D ++ F F ++ G ++ C D R ++ ++ +
Sbjct: 185 SLESEHMDTYGTMDNLRDCFAEFANKVPFYGRVICCVDWPEIRRIIPRLNR--------- 235
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+ T+G D A + P GGS + + G + L +
Sbjct: 236 ----------------RYTTFGIEEHADVMASEIEPG-DGGSTFTVEAFGERYPGVRLNV 278
Query: 377 PGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDL-IGTIYGCHI 434
PG HNVLN+LA + L + + +R + L+++ G+ RRF + G +
Sbjct: 279 PGRHNVLNALAAFSVGLEIGLPPER--------IIAGLARYSGMRRRFQVKYRGADGVLV 330
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSA 494
DD+AHHPTEV+A ++AAR + ++AVFQPH YSR +F ALS AD V V+
Sbjct: 331 IDDYAHHPTEVKATVRAARDGWKEHRIVAVFQPHLYSRTAEFAGEFGWALSRADTVYVAG 390
Query: 495 V 495
+
Sbjct: 391 I 391
>gi|148381488|ref|YP_001256029.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium botulinum A
str. ATCC 3502]
gi|153930938|ref|YP_001385863.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium botulinum A
str. ATCC 19397]
gi|153934724|ref|YP_001389270.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium botulinum A
str. Hall]
gi|166222973|sp|A7FPH5.1|MURC_CLOB1 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|166222974|sp|A5I7S3.1|MURC_CLOBH RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|148290972|emb|CAL85108.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium botulinum A
str. ATCC 3502]
gi|152926982|gb|ABS32482.1| UDP-N-acetylmuramate--alanine ligase [Clostridium botulinum A str.
ATCC 19397]
gi|152930638|gb|ABS36137.1| UDP-N-acetylmuramate--alanine ligase [Clostridium botulinum A str.
Hall]
Length = 458
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 149/434 (34%), Positives = 225/434 (51%), Gaps = 55/434 (12%)
Query: 70 DF-KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
DF K++ IHF+GIGG +S LA++ L F +SGSD+ S E L + GA ++IGH
Sbjct: 4 DFIKDKNKHIHFIGIGGISMSGLAEILLYNNFSISGSDMNSSPITEKLKDKGAKIYIGHK 63
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAV 186
N++ D +V ++AI DN EI AK + + R +L L + KYN IA+
Sbjct: 64 KENVKDAD------LIVYTAAIASDNPEITKAKEKNIKLMDRADFLGNLMKGYKYN-IAI 116
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
SG+HGK+TT SML++V D T +VG ++ +G++ G F+ EA EY FL
Sbjct: 117 SGTHGKTTTTSMLSHVALKANVDPTILVGGNL-DIINGNVRVGESDFFITEACEYKSSFL 175
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 306
P + V+ N+D +H+D ++D D +K+ F +F+K I G+LV G+ + +S++ +
Sbjct: 176 KFFPYIGVILNIDADHLDYYKDLDDIKNAFSKFIKLIPKDGYLVAYGEDKNIQSIIKEAS 235
Query: 307 QDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSS-----FNDWYAESVCPNVQGGSDYI 361
+ +ITYG +S N Y E C N +
Sbjct: 236 CN-------------------------VITYGINSGDIQAHNIEYDEKACGN------FD 264
Query: 362 LCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSR 421
+ + + L + L +PG HN+LNSLA I L + E I F G R
Sbjct: 265 VVKDNQKLFSVKLNVPGKHNILNSLASICIGLASNMKDKDIIEGI-------ESFFGTHR 317
Query: 422 RFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFA 481
RF+L G + DD+AHHPTE+ A L AA+ ++P+ L VFQPHTYSR + L DDF
Sbjct: 318 RFELKGCKNNITVIDDYAHHPTEISATLDAAK-KYPHNKLFCVFQPHTYSRTLTLFDDFT 376
Query: 482 NALSEADQVVVSAV 495
AD+++++ +
Sbjct: 377 KCFDNADEIILADI 390
>gi|304437324|ref|ZP_07397283.1| UDP-N-acetylmuramate--L-alanine ligase [Selenomonas sp. oral taxon
149 str. 67H29BP]
gi|304369580|gb|EFM23246.1| UDP-N-acetylmuramate--L-alanine ligase [Selenomonas sp. oral taxon
149 str. 67H29BP]
Length = 785
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 154/434 (35%), Positives = 231/434 (53%), Gaps = 56/434 (12%)
Query: 71 FKNRKGW--IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHI-GH 127
K KG IHFVGIGG+G+S LAK+ L+ G+ VSGSD S + L GA++ G
Sbjct: 5 LKELKGIQKIHFVGIGGAGMSPLAKILLQLGYTVSGSDTGNSPLIGELARLGAHVWTDGQ 64
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
+++G D A+V S+AIP DN E++ A + +P R A L +Y+ IAV+
Sbjct: 65 HAEHVRGAD------AIVVSTAIPYDNPEVIAAWDLRIPKLHRSDINAALVNEYDGIAVA 118
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
GSHGK+TT SM+ L +G T IVG VP + G + V EADE DG FL
Sbjct: 119 GSHGKTTTTSMIGVTLDRVGVSPTIIVGGEVPDLGTNAKL-GTSRYLVSEADESDGSFLK 177
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
L P +AVVTN++ +H+D + + + + FR+F++Q+ G V+C +++ +L I +
Sbjct: 178 LRPHIAVVTNVEDDHMDHYGTMEKIIAAFRQFIEQVDTDGTAVLCFENE----ILRNIAR 233
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS-DYILCERG 366
+T +K+++Y D+ A ++ +G + + ERG
Sbjct: 234 ETA---------------------HKVVSYAIDHEADYRASNI--ETRGSVISFSVHERG 270
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLP-----LSKFMGVSR 421
+ ++ L IPG HNVLN+LA IA +A ++ P L++F G R
Sbjct: 271 TEMGRVLLNIPGRHNVLNALACIAVA------------RLAGVEFPAICDALAQFHGAKR 318
Query: 422 RFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFA 481
RF G G + DD+AHHPTE+ L AARQ P + LI VFQPH YSR +L+ +F
Sbjct: 319 RFQTKGKERGVWVVDDYAHHPTEIAVTLAAARQTNPER-LICVFQPHRYSRTQLLRAEFG 377
Query: 482 NALSEADQVVVSAV 495
++AD ++++ V
Sbjct: 378 KCFADADLLLITDV 391
>gi|347538012|ref|YP_004845436.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudogulbenkiania sp.
NH8B]
gi|345641189|dbj|BAK75022.1| UDP-N-acetylmuramate--alanine ligase [Pseudogulbenkiania sp. NH8B]
Length = 463
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 155/434 (35%), Positives = 225/434 (51%), Gaps = 50/434 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K+R IHFVGIGG G+ +A++ L G+ VSGSD+ S+ + L+ GA +H GH +
Sbjct: 1 MKHRVKHIHFVGIGGVGMCGIAEVLLNLGYTVSGSDMAESAATKRLVAQGAEVHFGHDAA 60
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
+QG D VV S+A+ DN E++ AK+ +P+ R LA+L IA++G+H
Sbjct: 61 YMQGAD------VVVTSTAVKADNPEVVEAKARHIPVIPRAMMLAELMRFKQGIAIAGTH 114
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S+ A VL A G D T ++G + + G G+ V EADE D FL L+P
Sbjct: 115 GKTTTTSLTASVLAAAGLDPTFVIGGKLTAAGTNAKL-GSGEFLVAEADESDASFLHLAP 173
Query: 251 SVAVVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
+AVVTN+D +H+D +E D +K F FL ++ G V+C D R +L ++ +
Sbjct: 174 VMAVVTNIDADHMDTYEHSFDKLKQAFVDFLHRLPFYGRAVLCLDDANVREILPRVTK-- 231
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDY--ILCERGR 367
+ TYGFS D A +V GG + ++ G
Sbjct: 232 -----------------------PVTTYGFSDDADVQAANV--RAVGGQMHFDVVARNGN 266
Query: 368 PLA-QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
L + L +PG HNVLN+L+ IA L D +A ++ L++F GV RRF
Sbjct: 267 QLHFPVVLNLPGRHNVLNALSAIAIGLECGAD-------VASIQQGLAEFAGVGRRFQRY 319
Query: 427 GTIY---GCH--IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFA 481
G + G H + DD+ HHP E+ A L A R FP + L+ FQPH Y+R L +DF
Sbjct: 320 GEVACPSGGHFTLVDDYGHHPVEMAATLAAVRGAFPTQRLVLAFQPHRYTRTRDLFEDFV 379
Query: 482 NALSEADQVVVSAV 495
LS D +++S V
Sbjct: 380 KVLSTVDVLLLSEV 393
>gi|402835776|ref|ZP_10884334.1| UDP-N-acetylmuramate--L-alanine ligase [Mogibacterium sp. CM50]
gi|402273286|gb|EJU22491.1| UDP-N-acetylmuramate--L-alanine ligase [Mogibacterium sp. CM50]
Length = 458
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 153/443 (34%), Positives = 231/443 (52%), Gaps = 46/443 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH +GIGG GLSA+A++ G VSG+D+ S L + G ++ H N+ D
Sbjct: 10 IHCLGIGGVGLSAVAEILQDNGHVVSGTDINKSEITNHLRDNGIKIYYEHKAENVDCVD- 68
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKSTTA 196
AVV S+A+P+ N EI+ AK +PI+ R L + Y + +AV G+HGK+T
Sbjct: 69 -----AVVYSNAVPETNPEIVRAKERRIPIFSRAEVLGMIMNNYKHSVAVCGTHGKTTVT 123
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM + +L+ + T +VG +V + G++ G FV EA EY FL L+P++ V+
Sbjct: 124 SMTSLILRNAKYNPTILVGGNVEEIK-GNVEIGDNDYFVTEACEYMDSFLHLTPTIGVLL 182
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N+D +H+D F+D + + F+ F+ I G ++ G++ + L +
Sbjct: 183 NIDSDHLDYFKDIEHIVKSFKEFVMNIPKKGIVIAFGENPFVKEALKGLTN--------- 233
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+ITYG++S ND+YAE++ + G +Y +C G+ L + L +
Sbjct: 234 -----------------VITYGYTSSNDFYAENISFDDNGFPEYDICHEGKVLCHLHLGV 276
Query: 377 PGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIG-TIYGCHI 434
PG HNVLNS+A T L + D E IA L F G RRFD G T G I
Sbjct: 277 PGEHNVLNSMAAYVTSSYLGVND-----EVIAS---TLKAFRGTHRRFDFTGVTRNGVRI 328
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSA 494
DD+AHHPTE++A L AA NK L VFQPHTY+R L DDF ++ D ++++
Sbjct: 329 VDDYAHHPTEIKATLAAASNVKHNK-LRVVFQPHTYTRTKALFDDFIDSFDHVDSLIITD 387
Query: 495 VLVFWLI-IFAVSSFWLIMAINS 516
+ ++ VSS+ L+ AI +
Sbjct: 388 IYAAREKDVYGVSSYQLVNAIKA 410
>gi|168183628|ref|ZP_02618292.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium botulinum Bf]
gi|237797009|ref|YP_002864561.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium botulinum Ba4
str. 657]
gi|259509765|sp|C3KWA4.1|MURC_CLOB6 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|182673211|gb|EDT85172.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium botulinum Bf]
gi|229261312|gb|ACQ52345.1| UDP-N-acetylmuramate--alanine ligase [Clostridium botulinum Ba4
str. 657]
Length = 458
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 146/431 (33%), Positives = 225/431 (52%), Gaps = 54/431 (12%)
Query: 72 KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSN 131
K++ IHF+GIGG +S LA++ L F +SGSD+ S + L + GA+++IGH N
Sbjct: 7 KDKNKHIHFIGIGGISMSGLAEILLYHNFTISGSDMNSSPITKKLKDKGAHIYIGHKKEN 66
Query: 132 IQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAVSGS 189
I+ D +V ++AI DN EI+ AK + + R +L L + KYN IA+SG+
Sbjct: 67 IKDAD------LIVYTAAIASDNPEIIEAKEKNIKLMDRADFLGDLMKGYKYN-IAISGT 119
Query: 190 HGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLS 249
HGK+TT SML++V D T +VG ++ +G++ G F+ EA EY FL
Sbjct: 120 HGKTTTTSMLSHVALKANVDPTILVGGNL-DIINGNVRVGKSDFFITEACEYKSSFLKFF 178
Query: 250 PSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
P + + N+D +H+D ++D D +K+ F +F+K I G+LV G+ + +S++ + +
Sbjct: 179 PYIGAILNIDADHLDYYKDLDDIKNAFSKFIKLIPKDGYLVAYGEDKNIQSIIKEASCN- 237
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSS-----FNDWYAESVCPNVQGGSDYILCE 364
+ITYG +S N Y E C N + + +
Sbjct: 238 ------------------------VITYGINSGDIQAHNIEYDEKACGN------FDVVK 267
Query: 365 RGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFD 424
+ L + L +PG HN+LNSLA I L + E I F G RRF+
Sbjct: 268 NNQKLFSVKLNVPGKHNILNSLASICIGLASNMKDKDIIEGI-------ESFFGTHRRFE 320
Query: 425 LIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANAL 484
L G + DD+AHHPTE+ A L AA+ ++P+ L VFQPHTYSR + L DDF
Sbjct: 321 LKGCKNNITVIDDYAHHPTEISATLDAAK-KYPHNKLFCVFQPHTYSRTLTLFDDFTKCF 379
Query: 485 SEADQVVVSAV 495
+AD+++++ +
Sbjct: 380 DKADEIILADI 390
>gi|320161741|ref|YP_004174966.1| UDP-N-acetylmuramate--L-alanine ligase [Anaerolinea thermophila
UNI-1]
gi|319995595|dbj|BAJ64366.1| UDP-N-acetylmuramate--L-alanine ligase [Anaerolinea thermophila
UNI-1]
Length = 461
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 158/420 (37%), Positives = 228/420 (54%), Gaps = 42/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH +GIGGSGLSA+A+L ++QG +VSGSD + + L + G + IGH+ NI G
Sbjct: 4 IHLIGIGGSGLSAIARLLVEQGVQVSGSDRAETPFTRELRDMGIPVFIGHAAGNISGA-- 61
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSAIP+DN E+ A+ G+P+ KR +L +KY +IAV+G+HGK+TT
Sbjct: 62 ----TMVVRSSAIPEDNPEVQAARQAGIPVLKRAEFLETFLKKYRVIAVAGTHGKTTTTG 117
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A++L ++ + + I+G V + G FV+EADEYD FLGL P +AV+T
Sbjct: 118 MIAWMLSSLAQNPSYIIGGVVRDL-HTNAHAGKSDLFVIEADEYDRMFLGLHPHIAVITY 176
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
L+ +H D F F F++QI+ GG L++ GD R+L G GV
Sbjct: 177 LEHDHPDCFPTMADYSGAFEDFIRQIQAGGILLVNGDHPPTRAL--------GQATPKGV 228
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER-----GRPLAQI 372
K++TYG S N ++ + N GG + ++ R L +
Sbjct: 229 ---------------KVMTYGESEHNTYFLKHASVNRWGGFSADVWKQMPDGENRRLLHL 273
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC 432
+LQ+PG HN+LN+ + D+ S A L L F G RRF++ G G
Sbjct: 274 ALQVPGKHNLLNA-----LAALAVADQLGLMLSPAAEALHL--FHGTGRRFEVRGEANGV 326
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+ DD+AHHPTE+R L AAR R+P + + AV+QPHTYSR L ++F + +AD VVV
Sbjct: 327 TLIDDYAHHPTEIRTTLAAARARYPERHIWAVWQPHTYSRTQALMEEFCQSFEDADAVVV 386
>gi|390933848|ref|YP_006391353.1| UDP-N-acetylmuramate--L-alanine ligase [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389569349|gb|AFK85754.1| UDP-N-acetylmuramate--L-alanine ligase [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 465
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 142/428 (33%), Positives = 230/428 (53%), Gaps = 42/428 (9%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+D +N K +HF+GIGG +S LA + L G V+GSD+ S ++ L GA ++I HS
Sbjct: 3 IDIENFK-RVHFIGIGGISMSGLAHIMLNSGHIVTGSDIKDSHIIKKLRNEGAIINIPHS 61
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVS 187
SN+ G D VV ++A+ +DN E++ ++ + +P R L ++ +KY + V+
Sbjct: 62 ASNVDGAD------LVVYTAAVKEDNPEMIRSRQLNIPTIDRATLLGEIMKKYKYGVGVA 115
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
GSHGK+TT S+++ +L+ M D T +VG V G++ G + F+ EA EY FL
Sbjct: 116 GSHGKTTTTSLISVLLEEMNYDPTVLVGGEV-DIIGGNVRVGNSEYFITEACEYTDSFLK 174
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P +AV+ N+D +H+D F++ D +K F +F + G +V CGD S+L + +
Sbjct: 175 FYPYIAVILNVDSDHLDYFKNIDNIKQSFTQFANLVPNDGFVVACGDDPNTMSVLKDVNR 234
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR 367
+ IIT+G S W A+++ + +G + + G
Sbjct: 235 N-------------------------IITFGIDSNCTWNAKNIKFDEKGFPSFDVYYNGT 269
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
+ + L I G HN+LN+LA ++ L D ++ + I KF G RRF+ G
Sbjct: 270 FVERFELSIVGKHNILNALATLSVCHLLGVDIKKCPDVI-------KKFKGTHRRFEFKG 322
Query: 428 TIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
TI G + DD+AHHPTE++A L +A +P+ +I VFQPHTY+R L +DFA + +A
Sbjct: 323 TIDGAIVIDDYAHHPTEIKATLSSALN-YPHNRIICVFQPHTYTRTYSLLNDFAASFDDA 381
Query: 488 DQVVVSAV 495
D +++ +
Sbjct: 382 DITIITDI 389
>gi|271964376|ref|YP_003338572.1| UDP-N-acetylmuramate--L-alanine ligase [Streptosporangium roseum
DSM 43021]
gi|270507551|gb|ACZ85829.1| UDP-N-acetylmuramate--alanine ligase [Streptosporangium roseum DSM
43021]
Length = 468
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 156/421 (37%), Positives = 224/421 (53%), Gaps = 47/421 (11%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G +HF+GIGG+G+S +A++ LK+G VSGSD S + L E G +HIGH+ SNI+
Sbjct: 16 GRVHFIGIGGAGMSGIARILLKRGVPVSGSDARGSDMVTELRELGGRVHIGHAASNIKNV 75
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D VV S+AI N E+ A G+ + R LA + +A++G+HGK+TT
Sbjct: 76 D------TVVVSTAIRDSNPELGEALRQGLRVIPRAAALASVMAGRTGVALAGTHGKTTT 129
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SML L+ G D + VG + G+ G G+ FV EADE DG FL L+P +AVV
Sbjct: 130 TSMLTVALQKCGADPSYCVGGQLVTTGLGA-DEGAGEVFVAEADESDGSFLMLAPEIAVV 188
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN++ +H+D + D AV F RF++ RVG +VIC D + +L+ I + GL
Sbjct: 189 TNVEPDHLDNYGDPRAVYDSFARFVE--RVGKSMVICADDPGSAALV-PIARARGL---- 241
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQ 375
K++TYG + D+ + P+ G S + + RG ++ L
Sbjct: 242 -----------------KVVTYGEAEGADFRVSGILPDGLGIS-FAVEGRG----EVRLA 279
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
+PG HN LN+ AVIA + L S ++ L+ F G RRF+ G G ++
Sbjct: 280 VPGRHNALNATAVIAVAMEL-------GVSFDEIRDGLAAFTGAKRRFEAKGEAGGVAVF 332
Query: 436 DDFAHHPTEVRAVLQAARQRFP----NKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
D +AHHPTE+ A L+AAR + +IAVFQPH YSR D+F AL AD+ +
Sbjct: 333 DSYAHHPTELAADLRAARDVVASFSGSGRVIAVFQPHLYSRTRFFADEFGVALGLADEAI 392
Query: 492 V 492
V
Sbjct: 393 V 393
>gi|323142002|ref|ZP_08076853.1| UDP-N-acetylmuramate--L-alanine ligase [Phascolarctobacterium
succinatutens YIT 12067]
gi|322413534|gb|EFY04402.1| UDP-N-acetylmuramate--L-alanine ligase [Phascolarctobacterium
succinatutens YIT 12067]
Length = 464
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 155/444 (34%), Positives = 238/444 (53%), Gaps = 49/444 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG+G+SA+A + +K+G++VSGSDL L E GA +++GH+ S ++ +
Sbjct: 12 IHFIGIGGAGMSAIAYVLIKRGYDVSGSDLNAGHMSAHLAEEGAMVYMGHAASQVEDAE- 70
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
AVV S+AI +N E++ A+ G+P+ R LA + + +AV+G+HGK+TT++
Sbjct: 71 -----AVVISTAIHPNNPELMEARKRGIPVLHRSDVLAAVMNAADGVAVAGAHGKTTTSA 125
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M++ + G D T I+G V G+ G G+ V EADE DG FL L P +AVVTN
Sbjct: 126 MISCIAAESGIDPTVIIGGEVSSL-GGNARNGAGRFVVAEADESDGSFLKLYPYLAVVTN 184
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
++ +H+D + E+ + F++F+ I+ GG V+C D+ R L +
Sbjct: 185 IEDDHLDHYGTEENIYQAFKQFVGNIKEGGKAVLCFDNAKVRRLAAET------------ 232
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFN-DWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
D ++ITYG D+ A + V G S Y L +G + ++ L +
Sbjct: 233 -------------DKEVITYGVEGEGADYIARDISYGVDGTS-YKLYYKGEFVTEVHLIV 278
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHE-SIACLKL--PLSKFMGVSRRFDLIGTIYGCH 433
PG HNVLNS+ A +HE IA K+ L KF G RRF+ G + G
Sbjct: 279 PGRHNVLNSMGAFAA----------AHEMGIATDKILASLKKFGGAKRRFETKGKVNGVW 328
Query: 434 IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVS 493
+ DD+AHHPTE+ L+AARQ P + L+ VFQPH Y+R +L +F + D+++++
Sbjct: 329 VVDDYAHHPTEIGVTLKAARQTKPER-LLCVFQPHRYTRTKLLFSEFCECFKDCDELILT 387
Query: 494 AVLVF-WLIIFAVSSFWLIMAINS 516
+ I VSS L I +
Sbjct: 388 DIYAASEEAITGVSSMHLAEGIKA 411
>gi|325829942|ref|ZP_08163400.1| UDP-N-acetylmuramate--L-alanine ligase [Eggerthella sp. HGA1]
gi|325488109|gb|EGC90546.1| UDP-N-acetylmuramate--L-alanine ligase [Eggerthella sp. HGA1]
Length = 475
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 158/421 (37%), Positives = 225/421 (53%), Gaps = 48/421 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI-QGND 136
+HF+G+GG G+S +A++A QG VSG+DL S Y + L EAG +HIGH +NI +GN
Sbjct: 9 VHFIGVGGVGMSGIARVAFDQGMRVSGTDLKESRYTKQLREAGIEVHIGHDPANIPEGN- 67
Query: 137 GSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
+V S+AI +N E+ AK+ G+ I+ R LA L +AV+G+HGK+TT+
Sbjct: 68 -----PVIVVSTAILDNNPELAAAKARGLTIWHRAQMLAYLGRALQTLAVAGTHGKTTTS 122
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SMLA VL MG+D T ++G V + + G G ++V+EADE D F+ LSP +VT
Sbjct: 123 SMLASVLDGMGEDPTFLIGGIVRAYGTNA-HSGTGAHYVVEADESDKSFMHLSPRAVLVT 181
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQI-RVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
N++ +H+D + D D + F F+ + GG +V CG+ + L ++ +G
Sbjct: 182 NIEADHLDHYRDLDEIYEKFASFIGSVPDDGGVVVACGEDEA----LVRVACASG----- 232
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYIL-CERGRPLAQISL 374
++ TYGFS D S PN G SD+ L G ++
Sbjct: 233 ----------------KRLFTYGFSDACDVRIASYEPNGVG-SDFTLELPDGSVVSAHVK 275
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHI 434
Q PG HNVLN+ V+ + L D Q+ E+ L+ F GV RRFDL+G G +
Sbjct: 276 QNPGRHNVLNAAGVVGLLWALGYDPAQAAEA-------LADFAGVKRRFDLVGEAGGVTV 328
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSR----LVVLKDDFANALSEADQV 490
DD+AHHPTE+ A ++AA + +FQPH YSR VLKDDF A AD V
Sbjct: 329 VDDYAHHPTEIAATIEAASH-LGFAHVHVLFQPHRYSRAPLFTEVLKDDFGRAFDAADAV 387
Query: 491 V 491
Sbjct: 388 T 388
>gi|121535917|ref|ZP_01667713.1| UDP-N-acetylmuramate--alanine ligase [Thermosinus carboxydivorans
Nor1]
gi|121305488|gb|EAX46434.1| UDP-N-acetylmuramate--alanine ligase [Thermosinus carboxydivorans
Nor1]
Length = 460
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 152/420 (36%), Positives = 222/420 (52%), Gaps = 44/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+SA+A + L +++SGSD+ S L + GA + IGH NI
Sbjct: 8 IHFVGIGGAGMSAIATVLLAMNYQISGSDINQSETTRKLEQMGAKVFIGHRSENI----- 62
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
R A+V SSAIP+ N EI A+ G+ I+ R +A L + IA++G+HGK+TT S
Sbjct: 63 -RDVEAIVVSSAIPESNPEIRAAREQGLKIFHRADIVAALMAEREGIAIAGAHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A VL+ G D T ++G + ++ G+ YG G+ V EADE DG FL L+P +AVVTN
Sbjct: 122 MIALVLEKAGLDPTVLIGGEL-EYIGGNAKYGKGRYLVAEADESDGSFLKLTPRLAVVTN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRV-GGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
++ +H+D +E + + F+ FL +I G V+C D+ R++ +
Sbjct: 181 IENDHMDFYETMENILFTFKEFLYKIHPKDGLAVLCFDNSYIRNIAASL----------- 229
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSD-YILCERGRPLAQISLQ 375
D I+Y + ++ A ++ V G + Y L I L
Sbjct: 230 --------------DRPYISYAINHDAEFTARNI--RVHGPAIIYDAYRHNELLGTIRLN 273
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
+PG HNV NSLA +A L + Q + +A F+G RRF G + G +
Sbjct: 274 VPGRHNVANSLAALAVGLHVGLTFSQVADGLAS-------FLGAKRRFQTKGRVNGIWVV 326
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHPTE+ L AAR+ P K LI VFQPH YSR L+ +F A AD +V++ +
Sbjct: 327 DDYAHHPTEITTTLLAAREMRP-KRLICVFQPHRYSRTKFLRSEFGRAFEPADILVLTDI 385
>gi|405354260|ref|ZP_11023640.1| UDP-N-acetylmuramate--alanine ligase [Chondromyces apiculatus DSM
436]
gi|397092503|gb|EJJ23261.1| UDP-N-acetylmuramate--alanine ligase [Myxococcus sp. (contaminant
ex DSM 436)]
Length = 472
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 150/427 (35%), Positives = 226/427 (52%), Gaps = 44/427 (10%)
Query: 71 FKNRKG-WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSV 129
FK R +HFVG+GG G+S +A++ L G+ VSGSDL S L GA GH
Sbjct: 10 FKTRHAAQVHFVGLGGIGMSGIAEVLLNLGYRVSGSDLRESDITRRLARMGATFFEGHRA 69
Query: 130 SNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGS 189
N+ D VV SSA+ +DN E++ A+ +P+ R LA+L +AV+GS
Sbjct: 70 QNLVQAD------VVVISSAVRKDNPEVVAARQRKIPVIPRAEMLAELMRLKYAVAVAGS 123
Query: 190 HGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLS 249
HGK+TT SM+A VL A G D TA+VG V D + G + V+EADE DG FL L
Sbjct: 124 HGKTTTTSMVATVLSAAGLDPTAVVGGKV-NVLDSNAKLGKSELMVVEADESDGSFLHLH 182
Query: 250 PSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
PS+A+VTN+D EH+D + D + ++S F F ++ G V+C D+ ++LL +I++
Sbjct: 183 PSIAIVTNIDPEHMDHYGDLETLQSAFVEFCNRVPFYGLNVLCLDNPNVQALLPRIEK-- 240
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRP 368
+ +TYG S D+ E++ + G + + R
Sbjct: 241 -----------------------RFVTYGSSHMADYRLENI--QLDGFTTRFQAYRREEA 275
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
L + +++ G HN N+LAVIA + + ++ L++F GV RRF + G
Sbjct: 276 LGEFRVRMVGAHNAFNALAVIAVA-------EEMDIPLETVRESLAEFGGVQRRFTVRGE 328
Query: 429 IYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
G + DD+AHHPTEV A L AR+ F + ++A FQPH Y+R L +F + +++D
Sbjct: 329 AQGITVVDDYAHHPTEVLATLAGARRAFGRRVVVA-FQPHRYTRTHDLMKEFTTSFNDSD 387
Query: 489 QVVVSAV 495
+ V++V
Sbjct: 388 VLFVTSV 394
>gi|85858527|ref|YP_460729.1| UDP-N-acetylmuramate--alanine ligase [Syntrophus aciditrophicus SB]
gi|109892747|sp|Q2LR47.1|MURC_SYNAS RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|85721618|gb|ABC76561.1| UDP-N-acetylmuramate--alanine ligase [Syntrophus aciditrophicus SB]
Length = 480
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 163/433 (37%), Positives = 230/433 (53%), Gaps = 50/433 (11%)
Query: 68 IVDFKNRK-GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG 126
I D RK IHFVGIGG G+S +A++ L G+ VSGSDL S E L GA + G
Sbjct: 14 ITDVMRRKVRHIHFVGIGGIGMSGIAEVLLNLGYTVSGSDLRTSDTTEHLSSLGATVFQG 73
Query: 127 HSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAV 186
H SN+ D VV S+A+ +DN E+L A VP+ R LA+L + IAV
Sbjct: 74 HKASNLTDVD------VVVTSTAVRKDNPEVLEAHRRSVPVIPRAEMLAELLKMKVSIAV 127
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSI----FYGGGKNFVLEADEYD 242
SGSHGK+TT SM+A V+ + G D T ++G + GSI G G+ V EADE D
Sbjct: 128 SGSHGKTTTTSMIATVMASGGLDPTMVIGGKL-----GSIGSNARMGHGEFIVAEADESD 182
Query: 243 GCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLL 302
G FL LSPS+AV+TN+D EH+D + + +K F +F + G V+C D +++L
Sbjct: 183 GSFLKLSPSLAVITNIDREHLDFYRGIEDIKDAFLQFANIVPFYGSAVLCLDDPHIKTIL 242
Query: 303 DQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYIL 362
IK+ K ITYG D+ A+ + N ++Y L
Sbjct: 243 SDIKR-------------------------KTITYGMEPAADYRAQELRFN-GAVTEYEL 276
Query: 363 CERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRR 422
R L ++L +PG+ NV NSLA +A R+ + ++ L ++GV RR
Sbjct: 277 YYRTECLGSVTLSVPGMFNVYNSLATVAVA-------RELDMTFPDIQQGLKSYVGVGRR 329
Query: 423 FDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFAN 482
++ G I G + DD+ HHPTE+ A L AARQ + N+ +I VFQPH Y+R L +F
Sbjct: 330 LEVKGKIAGVTVVDDYGHHPTEISATLAAARQVWKNR-MIVVFQPHRYTRTQALFREFLG 388
Query: 483 ALSEADQVVVSAV 495
A +EAD ++V+ +
Sbjct: 389 AFTEADLLIVTDI 401
>gi|430376378|ref|ZP_19430781.1| UDP-N-acetylmuramate--L-alanine ligase [Moraxella macacae 0408225]
gi|429541609|gb|ELA09637.1| UDP-N-acetylmuramate--L-alanine ligase [Moraxella macacae 0408225]
Length = 485
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 153/426 (35%), Positives = 223/426 (52%), Gaps = 47/426 (11%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG+G+ +A++ QG+ VSGSD+ S+ E L + G + IGH NI+
Sbjct: 21 RISHIHFVGIGGAGMCGIAEVMHNQGYTVSGSDIKASAVTERLKKMGVWVFIGHDSKNIE 80
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
D VV SSAI + N EI+ A + +P+ +R L +L + IAV+G+HGK+
Sbjct: 81 NAD------VVVVSSAIDRTNPEIVSALTARIPVVRRADMLGELMRYRHGIAVAGAHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S+L +L G D T +VG V F + G + V EADE D FL L P
Sbjct: 135 TTTSLLTVMLHEAGLDPTYVVGGKVNAFGKNASL-GQSRYLVAEADESDASFLSLRPMAC 193
Query: 254 VVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
+VTN+D +H++ + + D +K + +FL+ + G VICGD + ++D I +
Sbjct: 194 IVTNIDEDHMETYGNSFDNLKKAYIQFLQNMPFYGLAVICGDDKELYGMIDDISR----- 248
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQI 372
++TYG ND A V + +L + PL +I
Sbjct: 249 --------------------PVLTYGLEKHNDVQAVDVVADGTKTHFSVLRKDKDPL-KI 287
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG---TI 429
+L IPG+HNV N+L I T+ D+ S E IA + KF GV RRF+ G T+
Sbjct: 288 TLNIPGIHNVYNALGAI----TMASDEGVSDEVIAA---AVEKFAGVGRRFENNGYYSTL 340
Query: 430 YG---CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G + DD+ HHPTEV ++A RQ +PN+ L +FQPH YSR D+F N LS+
Sbjct: 341 DGDGDILLIDDYGHHPTEVAMTIKAGRQSYPNRRLTMIFQPHRYSRTRDCFDEFVNVLSQ 400
Query: 487 ADQVVV 492
D++++
Sbjct: 401 VDKLIL 406
>gi|227824969|ref|ZP_03989801.1| UDP-N-acetylmuramate-alanine ligase [Acidaminococcus sp. D21]
gi|352684900|ref|YP_004896885.1| UDP-N-acetylmuramate-alanine ligase [Acidaminococcus intestini
RyC-MR95]
gi|226905468|gb|EEH91386.1| UDP-N-acetylmuramate-alanine ligase [Acidaminococcus sp. D21]
gi|350279555|gb|AEQ22745.1| UDP-N-acetylmuramate-alanine ligase [Acidaminococcus intestini
RyC-MR95]
Length = 463
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 152/419 (36%), Positives = 232/419 (55%), Gaps = 42/419 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG+G+SALA + +K+GF VSGSD L + GA + IGH+ I+
Sbjct: 10 IHFIGIGGAGMSALANVLIKRGFHVSGSDAKPGDMATKLAKEGALVFIGHAACQIE---- 65
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V S+AI DN E++ A GVP+ R LA L K+ IAV+G+HGK+TT+S
Sbjct: 66 --RAEVIVVSTAIHPDNPELVEAHKRGVPVIHRSDVLAYLMNKHKGIAVAGAHGKTTTSS 123
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
ML+ + G D T +VG V S+ G V EADE DG FL P +AV+TN
Sbjct: 124 MLSLITCDNGIDPTVVVGGVVNNLGTNSV-NGKSDYVVAEADESDGSFLKFRPYLAVITN 182
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
++ +H+D + E+ ++ F++F+ Q++ G ++C D++ R +
Sbjct: 183 IENDHLDHYGTEEKIQEAFQQFVDQVKEQGKAILCYDNEKVRRV---------------- 226
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFN-DWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
G+ ++I+YG + + D+ AE++ + G+ Y + RG+ + + L +
Sbjct: 227 ---------GEKTATEVISYGIDAKDADYRAENIEYG-KDGTHYDILFRGKKIGKGHLIV 276
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG HNVLN+L +A R+ S+ + L KF G RRF+ G + G + D
Sbjct: 277 PGRHNVLNALGALAAA-------RELGLSVEEISRSLEKFTGAKRRFETKGRVRGIWVVD 329
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHPTE++ L+AARQ P K LI VFQPH Y+R +L D+FA A EAD+++V+ +
Sbjct: 330 DYAHHPTEIKVTLKAARQTQP-KRLIVVFQPHRYTRTQLLLDEFAVAFKEADELIVTDI 387
>gi|313895994|ref|ZP_07829548.1| UDP-N-acetylmuramate--L-alanine ligase [Selenomonas sp. oral taxon
137 str. F0430]
gi|312975419|gb|EFR40880.1| UDP-N-acetylmuramate--L-alanine ligase [Selenomonas sp. oral taxon
137 str. F0430]
Length = 776
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 154/421 (36%), Positives = 217/421 (51%), Gaps = 46/421 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHI-GHSVSNIQGND 136
IHFVGIGG+G+S LAK+ L G+EVSGSD S +E L+ GA++ G N++G D
Sbjct: 11 IHFVGIGGAGMSPLAKILLLLGYEVSGSDQGTSPIIEELVRLGAHIRTDGQRAENVRGAD 70
Query: 137 GSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
A+V S+AIP DN E++ A + +P R A L +Y+ IAV+GSHGK+TT
Sbjct: 71 ------AIVVSTAIPYDNPEVIAAWDLRIPKLHRSDINAALVNEYDGIAVAGSHGKTTTT 124
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM+ L T IVG VP + G + V EADE DG FL L P +AVVT
Sbjct: 125 SMIGVTLDRASVSPTVIVGGEVPDLGTNAKL-GTSRYLVSEADESDGSFLKLRPHIAVVT 183
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D + + + FR F+ QI G V+C +++ R L
Sbjct: 184 NVEDDHMDHYGTMEKIIEAFRTFISQIDADGTAVLCYENEILRRL--------------- 228
Query: 317 VVSNQSSDLWGQGHDYKIITY--GFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISL 374
G D +++Y ++ C +V + + ERG L +ISL
Sbjct: 229 ----------GAETDRTVVSYAIDAAADYRAADIETCGSV---ISFTVFERGTALGRISL 275
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHI 434
IPG HNVLN+LA +A R + + L+ F G RRF G G +
Sbjct: 276 HIPGRHNVLNALACVAVA-------RLAGLDFDRIADALAHFHGAKRRFQTKGKERGIWV 328
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSA 494
DD+AHHPTE+ A L AARQ P + L+ VFQPH YSR +L+ +F + AD ++++
Sbjct: 329 VDDYAHHPTEIAATLAAARQTEPGR-LVCVFQPHRYSRTQLLRAEFGGCFAAADLLLLTD 387
Query: 495 V 495
V
Sbjct: 388 V 388
>gi|291522020|emb|CBK80313.1| UDP-N-acetylmuramate--L-alanine ligase [Coprococcus catus GD/7]
Length = 458
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 147/424 (34%), Positives = 223/424 (52%), Gaps = 40/424 (9%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
N+ IHF+GIGG +S LA++ +GF V GSD S+ + L G + G NI
Sbjct: 7 NKPVKIHFMGIGGISMSGLAEILHAKGFTVVGSDAHESAITDHLTSLGIQIAYGQRAENI 66
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHG 191
+ + VV ++AI DN E AKS G+P+ R L ++ Y N IAVSG+HG
Sbjct: 67 TPD-----IDVVVYTAAIHPDNPEFAAAKSAGLPMMDRAELLGQIMTNYTNAIAVSGTHG 121
Query: 192 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPS 251
K+TT SML+++L A D T VG + + G+I G NF+ EA EY FL +PS
Sbjct: 122 KTTTTSMLSHILLAADTDPTISVGG-ILKAIHGNIRVGHSDNFITEACEYTNSFLKFNPS 180
Query: 252 VAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
+ ++ N++ +H+D F+D + ++ FR+F +++ LVI G+ + D
Sbjct: 181 LEIILNIEEDHLDFFKDINDIRHSFRKFAEKLDADDILVINGEISHVSEITD-------- 232
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQ 371
G IITYG D+ AE++ + + L G+ +
Sbjct: 233 -----------------GLPCHIITYGLKPECDYAAENITFDEFAKGSFDLIAYGKKIDH 275
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG 431
I L + G+HNV N+LA IA+ R+ H + +K L F G RRF+ G G
Sbjct: 276 IQLNVAGIHNVSNALAAIASA-------RELHIPMDIIKKGLMAFEGTDRRFEYKGQFNG 328
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+AHHPTE++A L AA Q++P++ + VFQPHTY+R +FA+ALS AD++V
Sbjct: 329 VTVIDDYAHHPTEIKATLTAA-QKYPHRQIWCVFQPHTYTRTKAFFHEFADALSLADKIV 387
Query: 492 VSAV 495
++ +
Sbjct: 388 LADI 391
>gi|312880217|ref|ZP_07740017.1| UDP-N-acetylmuramate/alanine ligase [Aminomonas paucivorans DSM
12260]
gi|310783508|gb|EFQ23906.1| UDP-N-acetylmuramate/alanine ligase [Aminomonas paucivorans DSM
12260]
Length = 485
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 147/419 (35%), Positives = 228/419 (54%), Gaps = 33/419 (7%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH +GIGG+G+S LA L GF VSG D+V +SY E +++ L +GH +++
Sbjct: 15 IHLMGIGGAGMSGLALLLKDMGFAVSGCDMVHTSYAEKVVQHKIELVLGHHQDHLE---- 70
Query: 138 SRF-PNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
RF P+ +V +SAI +++ EI A+ G+P+ +R L+ L + I V+G+HGK+TT+
Sbjct: 71 -RFSPDLLVYTSAISEEHPEIRAARERGIPVARRAEVLSDLFNRRRGIGVAGTHGKTTTS 129
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM+A + + G T +G + + G G+ V E DE DG F SP +AVVT
Sbjct: 130 SMIALIAENAGISPTVALGGELCDIGCNAKL-GSGETMVAELDESDGSFELFSPEIAVVT 188
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N+DW+HVD + ++V F RF + G LV+C + R L +++ +D G
Sbjct: 189 NIDWDHVDHYPTYESVGDAFHRFALGKKPAGSLVLCAEDAGTRRLAERLHED-------G 241
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+ S + TYG+ + W A V P GG ++ RG PL +SL++
Sbjct: 242 LASET------------LYTYGWGTSWTWGATDVTPLPGGGIRCLVHFRGTPLGTLSLRV 289
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
G HNVLN+LA A +++G + ++C L S F G RR +G G +YD
Sbjct: 290 SGEHNVLNALAACAAC-SIVGIPFE----VSCRAL--STFKGAKRRLQRVGAAEGVEVYD 342
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+ HHP E+ A L+A R FP++ L+ +FQPH ++R + +FA L+ AD+V++ V
Sbjct: 343 DYGHHPREIHATLRALRGAFPHRRLLVLFQPHRFTRTAAMFREFATVLTGADRVLLLPV 401
>gi|153952796|ref|YP_001393561.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium kluyveri DSM
555]
gi|219853461|ref|YP_002470583.1| hypothetical protein CKR_0118 [Clostridium kluyveri NBRC 12016]
gi|189028986|sp|A5N4I2.1|MURC_CLOK5 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|254765992|sp|B9DY44.1|MURC_CLOK1 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|146345677|gb|EDK32213.1| MurC [Clostridium kluyveri DSM 555]
gi|219567185|dbj|BAH05169.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 457
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 144/430 (33%), Positives = 240/430 (55%), Gaps = 46/430 (10%)
Query: 70 DF-KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
DF KN+K +HF+GIGG +SALA++ L++GF+VSGSD+ S E L GA ++IG
Sbjct: 4 DFIKNKK--VHFIGIGGISMSALAEILLEKGFKVSGSDVKSSEATERLELKGAKVYIGQI 61
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAV 186
NI + + VV ++AI ++N E+L AK + +P+ R +L ++ + KYN IAV
Sbjct: 62 SQNITSD-----IDLVVYTAAISKNNEELLKAKDLNIPLMDRAEFLGEIMKGHKYN-IAV 115
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
SG+HGK+TT SML+ + D T +VG ++ G++ G F+ EA EY FL
Sbjct: 116 SGTHGKTTTTSMLSSITLEANLDPTILVGGNL-DIIGGNVRIGNSPFFITEACEYKESFL 174
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 306
P + ++ N+D +H+D ++D + +++ F +F K I G+LV C D + ++ +
Sbjct: 175 KFFPFIGIILNIDADHLDYYKDIEEIQNAFIKFGKLIPKEGYLVCCADDRRMEKIISNV- 233
Query: 307 QDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERG 366
+ +++YG + D A+++C + +G + + + +
Sbjct: 234 ------------------------NCNVMSYGIET-GDITAKNICFDKEGRAFFEVYKSD 268
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
+ L ++L +PG HN+LN+LA I+ L L + S+ + L F G RRF++
Sbjct: 269 KKLFSLNLSVPGEHNILNALASISVSLIL-------NISVDNIINGLKSFKGTHRRFEIK 321
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G G + DD+AHHPTE++A L AA+ +P+K +I VFQPHT+SR + L +F A
Sbjct: 322 GQRKGVVVIDDYAHHPTEIKATLNAAKN-YPHKRIICVFQPHTFSRTISLFKEFTAAFDN 380
Query: 487 ADQVVVSAVL 496
D++++S +
Sbjct: 381 VDELILSDIF 390
>gi|167630129|ref|YP_001680628.1| udp-n-acetylmuramate--alanine ligase [Heliobacterium modesticaldum
Ice1]
gi|167592869|gb|ABZ84617.1| udp-n-acetylmuramate--alanine ligase, putative [Heliobacterium
modesticaldum Ice1]
Length = 461
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 152/421 (36%), Positives = 228/421 (54%), Gaps = 43/421 (10%)
Query: 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGND 136
W+HF+GIGG+G+S LA++ L+QG+ VSGSDL ++ E L+ GA + GH ++
Sbjct: 7 WLHFIGIGGTGMSGLARVMLQQGYTVSGSDLADTAVTERLVSQGATVFQGHREEHL---- 62
Query: 137 GSRFPN--AVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKST 194
P VV S+A+ DN E+ AK + I+ R LA L E+ IAV+G+HGK+T
Sbjct: 63 ---LPGVDVVVVSTAVKGDNPELRLAKERNLTIWHRADLLAWLMEQKKGIAVAGTHGKTT 119
Query: 195 TASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAV 254
T++M+ +L+ G D IVG + + +G+ +G G EADE D FL LSP +AV
Sbjct: 120 TSAMIGLMLEQCGLDPAIIVGGEIREI-EGNAKWGQGDFMAAEADESDRSFLKLSPWMAV 178
Query: 255 VTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYS 314
+TN++ +H+D ++ +A+ F +F +++ G L++C D LL ++ Q +
Sbjct: 179 ITNIEADHLDHYQSFEAIVEAFYQFTERLSGDGILLLCADD----PLLQEMAQRVTAR-- 232
Query: 315 GGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISL 374
+++TYG + D+ A + +G I R L ++ L
Sbjct: 233 ------------------RVVTYGMKAKADYRAVDLSCTGKGSQADIFRGEER-LGRLML 273
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHI 434
+PG HN+ N+LA +A LIG A LS+F GV RRF +G G +
Sbjct: 274 SVPGEHNMSNALAAVACA-DLIGI------PFAAAAAALSRFGGVGRRFQRMGEAKGVSV 326
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSA 494
DD+AHHPTEV+A L AARQ P + L+AVFQPH Y+R L +F A AD VV+S
Sbjct: 327 VDDYAHHPTEVKATLAAARQTQPGR-LVAVFQPHRYTRTRDLYREFGEAFDAADVVVLSE 385
Query: 495 V 495
+
Sbjct: 386 I 386
>gi|357590980|ref|ZP_09129646.1| UDP-N-acetylmuramate--L-alanine ligase [Corynebacterium nuruki
S6-4]
Length = 489
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 160/427 (37%), Positives = 232/427 (54%), Gaps = 25/427 (5%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
+R +H VGIGG+G+S +A++ L +G VSGSD+ S + L AGA + +GH N+
Sbjct: 10 DRLQRVHMVGIGGAGMSGIARILLDRGVAVSGSDMKESRVVLALRAAGAVIGVGHRAENL 69
Query: 133 QGNDGSRFPNAVVAS-SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHG 191
G+ P+AVV S +AIPQDN E++ A+ G+P+ +R LA L + +SG+HG
Sbjct: 70 DLAGGA--PDAVVTSFAAIPQDNPELVAARERGIPVLRRSDMLALLMADSRAVLISGTHG 127
Query: 192 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPS 251
K++T SM L+A G D + +G + + + G G FV EADE DG FL SP+
Sbjct: 128 KTSTTSMAVVGLQAAGLDPSFAIGGQLNRAGTNA-HNGTGDVFVAEADESDGSFLTYSPT 186
Query: 252 VAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
VAVVTN++ +H+D + E A ++F F +IR GG LV C + A L ++ L
Sbjct: 187 VAVVTNIEADHLDYYGTEAAYHAVFGEFAGRIRDGGALVACVEDDGAAELAERAAAGE-L 245
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE--RGRPL 369
+ GV ++G G + + + ES G + + G P+
Sbjct: 246 PLADGV------RVFGYGAEAALAAHPSVPAGAVVLESAALPDGGSRARVRLDGVPGAPV 299
Query: 370 AQISLQIPGVHNVLNSLA-VIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
++++ PG H VLN+ A ++A V L+G QS + + F GV RRF+ G
Sbjct: 300 VELTVHTPGHHMVLNAAASLLAGV--LVGADPQS------VADGIGDFEGVRRRFEFHGE 351
Query: 429 IYGCHIYDDFAHHPTEVRAVLQAARQRFPNKA---LIAVFQPHTYSRLVVLKDDFANALS 485
+ G +YDD+AHHPTEVRAVL AAR + + +I VFQPH YSR V +FA AL
Sbjct: 352 VGGVEVYDDYAHHPTEVRAVLSAARAKVDARGGGRVIVVFQPHLYSRTVNFATEFAAALD 411
Query: 486 EADQVVV 492
AD VVV
Sbjct: 412 LADSVVV 418
>gi|387819829|ref|YP_005680176.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium botulinum
H04402 065]
gi|322807873|emb|CBZ05448.1| UDP-N-acetylmuramate--alanine ligase [Clostridium botulinum H04402
065]
Length = 458
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 146/431 (33%), Positives = 224/431 (51%), Gaps = 54/431 (12%)
Query: 72 KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSN 131
K++ IHF+GIGG +S LA++ L F +SGSD+ S + L + GA+++IGH N
Sbjct: 7 KDKNKHIHFIGIGGISMSGLAEILLYHNFTISGSDMNSSPITKKLRDKGAHIYIGHKKEN 66
Query: 132 IQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAVSGS 189
I+ D +V ++AI DN EI+ AK + + R +L L + KYN IA+SG+
Sbjct: 67 IKDAD------LIVYTAAIASDNPEIIEAKEKNIKLMDRADFLGDLMKGYKYN-IAISGT 119
Query: 190 HGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLS 249
HGK+TT SML++V D T +VG ++ +G++ G F+ EA EY FL
Sbjct: 120 HGKTTTTSMLSHVALKANVDPTILVGGNL-DIINGNVRVGKSDFFITEACEYKSSFLKFF 178
Query: 250 PSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
P + + N+D +H+D ++D D +K+ F +F+K I G+LV G+ + +S++ + +
Sbjct: 179 PYIGAILNIDADHLDYYKDLDDIKNAFSKFIKLIPKDGYLVAYGEDKNIQSIIKEASCN- 237
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSS-----FNDWYAESVCPNVQGGSDYILCE 364
+ITYG +S N Y E C N + + +
Sbjct: 238 ------------------------VITYGINSGDIQAHNIEYDEKACGN------FDVVK 267
Query: 365 RGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFD 424
+ L + L +PG HN+LNSLA I L + E I F G RRF+
Sbjct: 268 DNQKLFSVKLNVPGKHNILNSLASICIGLASNMKDKDIIEGI-------ESFFGTHRRFE 320
Query: 425 LIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANAL 484
L G + DD+AHHPTE+ A L AA+ ++P+ L VFQPHTYSR + L DDF
Sbjct: 321 LKGCKNNITVIDDYAHHPTEISATLDAAK-KYPHNKLFCVFQPHTYSRTLTLFDDFTKCF 379
Query: 485 SEADQVVVSAV 495
AD+++++ +
Sbjct: 380 DNADEIILADI 390
>gi|392407233|ref|YP_006443841.1| UDP-N-acetylmuramate--L-alanine ligase [Anaerobaculum mobile DSM
13181]
gi|390620369|gb|AFM21516.1| UDP-N-acetylmuramate--L-alanine ligase [Anaerobaculum mobile DSM
13181]
Length = 479
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 146/418 (34%), Positives = 218/418 (52%), Gaps = 37/418 (8%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H +G+GG+G+S LA L + G+EVSG D+ +SY+ L G + GH S+I
Sbjct: 17 LHLMGVGGAGMSGLAHLLKELGYEVSGCDVSRTSYICNLERLGIKVLRGHCASHID---- 72
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
P+ +V SSAI +NVE+ +A+ VGV I +R L+ L + I ++G+HGK+TT+S
Sbjct: 73 IFKPDLLVYSSAIAWNNVELEYARKVGVNIARRGDILSALFNRLKGIGIAGAHGKTTTSS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A VL A G D T +G V G+ G G+ V E DE DG F S + V+TN
Sbjct: 133 MIATVLDAAGLDPTVAIGGEVSDI-GGNARLGHGEYMVSELDESDGSFELFSCHIPVITN 191
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+DW+HV+ + +V+ F RFL + GG +V+CG+ +S+
Sbjct: 192 IDWDHVNFYPTFQSVQDAFVRFLSNRKDGGKIVMCGEDAGCQSV---------------- 235
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
S L+ ITYG+ +W A V ++ GG + G+ + +++L++
Sbjct: 236 -----SKLFAP----HCITYGWGKHWNWGAVDVNHSIGGGVTFTAIREGKEMGRLALRVS 286
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD 437
G HNVLN+LA A +GD I ++ L F G RR +G G + YDD
Sbjct: 287 GEHNVLNALATCA-----VGDLLNIDFGI--VQKALYNFKGTKRRLQCLGISNGIYFYDD 339
Query: 438 FAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
+ HHP E+RA L R FP+ L+ +FQPH Y+R + FA L+ AD V + V
Sbjct: 340 YGHHPREIRATLDTLRNIFPSHRLVVIFQPHRYTRTKAMYAKFAEVLANADVVYILPV 397
>gi|374319904|ref|YP_005073033.1| UDP-N-acetylmuramate--L-alanine ligase [Paenibacillus terrae
HPL-003]
gi|357198913|gb|AET56810.1| UDP-N-acetylmuramate/alanine ligase [Paenibacillus terrae HPL-003]
Length = 460
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 143/423 (33%), Positives = 228/423 (53%), Gaps = 51/423 (12%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG G+SA+A++ L+ G+ V+GSD+ E L GA +++GH+ ++ G D
Sbjct: 8 VHFIGIGGYGMSAIARVMLEMGYTVTGSDVASQELTEKLAAKGAKIYLGHTPEHVTGAD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV S+A+ +DNVE + A+ + +P R LA+L + +AV+G+HGK+TT+S
Sbjct: 67 -----IVVYSTALSRDNVERVAAEELNIPTLHRSQMLARLLNERMGVAVAGAHGKTTTSS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVT 256
M+A V++ D T I+G + G+ G FV+ EADE DG FL P +VT
Sbjct: 122 MIALVMERCNVDPTYIIGGEITNL--GTNAKAGKSEFVVAEADESDGSFLQYHPWQGIVT 179
Query: 257 NLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
N++ +H++ ++ D + +KS + +FL QIR G ++C D Q R +L QI+
Sbjct: 180 NIEADHLENYDGDFNRLKSAYVQFLSQIRPDGAAIVCADDQNVREMLPQIQT-------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS---DYILCERGRPLAQI 372
++ITYG ++ A ++Q G + + +G L I
Sbjct: 232 -----------------RVITYGVEHEANYTA----TDIQLGDRRLSFTMNHKGTALGTI 270
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC 432
L +PG HN+ N++A + + L + E IA + +F G RRF ++G
Sbjct: 271 ELSVPGKHNLYNAMASVISCL----EAGIPFEQIAA---AIVEFHGAKRRFQVLGESNDI 323
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+ DD+AHHPTE+ A + AA K +IAVFQP YSR L D F+ A SEA++V++
Sbjct: 324 LVIDDYAHHPTEIEATISAA--TVTGKRIIAVFQPQRYSRTFFLLDAFSRAFSEANEVII 381
Query: 493 SAV 495
+ +
Sbjct: 382 TDI 384
>gi|338536721|ref|YP_004670055.1| UDP-N-acetylmuramate--L-alanine ligase [Myxococcus fulvus HW-1]
gi|337262817|gb|AEI68977.1| UDP-N-acetylmuramate--L-alanine ligase [Myxococcus fulvus HW-1]
Length = 472
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 149/427 (34%), Positives = 226/427 (52%), Gaps = 44/427 (10%)
Query: 71 FKNRKG-WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSV 129
FK R +HFVG+GG G+S +A++ L G+ VSGSDL S L GA GH
Sbjct: 10 FKTRHAAQVHFVGLGGIGMSGIAEVLLNLGYRVSGSDLRESDITRRLARMGATFFEGHRA 69
Query: 130 SNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGS 189
N+ D VV SSA+ +DN E++ A+ +P+ R LA+L +AV+GS
Sbjct: 70 QNLVQAD------VVVISSAVRKDNPEVVAARQRKIPVIPRAEMLAELMRLKYAVAVAGS 123
Query: 190 HGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLS 249
HGK+TT SM+A VL A G D TA+VG V D + G + V+EADE DG FL L
Sbjct: 124 HGKTTTTSMVATVLSAAGLDPTAVVGGKV-NVLDSNAKLGKSELMVVEADESDGSFLHLH 182
Query: 250 PSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
PS+A+VTN+D EH+D + D + ++S F F ++ G V+C D+ ++LL ++++
Sbjct: 183 PSIAIVTNIDPEHMDHYGDLETLQSAFVEFCNRVPFYGLNVLCLDNPNVQALLPRMEK-- 240
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRP 368
+ +TYG S D+ E++ + G + + R
Sbjct: 241 -----------------------RFVTYGSSHMADYRLENI--QLDGFTTRFQAYRREEA 275
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
L + +++ G HN N+LAVIA + + ++ L++F GV RRF + G
Sbjct: 276 LGEFRVRMVGAHNAFNALAVIAVA-------EEMDIPLETVRESLAEFGGVQRRFTVRGE 328
Query: 429 IYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
G + DD+AHHPTEV A L AR+ F + ++A FQPH Y+R L +F + +++D
Sbjct: 329 AQGITVVDDYAHHPTEVLATLAGARRAFGRRVVVA-FQPHRYTRTHDLLKEFTTSFNDSD 387
Query: 489 QVVVSAV 495
+ V++V
Sbjct: 388 VLFVTSV 394
>gi|182420067|ref|ZP_02951301.1| UDP-N-acetylmuramate--alanine ligase [Clostridium butyricum 5521]
gi|237669521|ref|ZP_04529501.1| UDP-N-acetylmuramate--alanine ligase [Clostridium butyricum E4 str.
BoNT E BL5262]
gi|182376104|gb|EDT73691.1| UDP-N-acetylmuramate--alanine ligase [Clostridium butyricum 5521]
gi|237654965|gb|EEP52525.1| UDP-N-acetylmuramate--alanine ligase [Clostridium butyricum E4 str.
BoNT E BL5262]
Length = 461
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 147/425 (34%), Positives = 225/425 (52%), Gaps = 44/425 (10%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K+R IHF+GIGG +S LA + L GF+VSGSD S +E L GA ++IGH+
Sbjct: 6 LKDRDKKIHFIGIGGISMSGLAAVLLNSGFKVSGSDFKDSPIVEKLRAEGAEIYIGHNKD 65
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAVSG 188
NI+ + + VV ++AIP DN EIL AK + + R +L + + KYN +AVSG
Sbjct: 66 NIKKD-----VDLVVYTAAIPSDNPEILAAKDQNILLMDRAEFLGHIMKGHKYN-VAVSG 119
Query: 189 SHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGL 248
+HGK+T SML++V A D T +VG + G+ G + F+ EA EY FL
Sbjct: 120 THGKTTCTSMLSHVTLAANLDPTILVGGELDVIG-GNFRIGNSEYFLTEACEYKKSFLKF 178
Query: 249 SPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQD 308
P V ++ N+D +H+D ++D + + F F K I G+LV GD + + +L + +
Sbjct: 179 PPYVGIILNIDADHLDCYKDINEIADTFMAFSKLIPKDGYLVGYGDDERVKEILSNAECN 238
Query: 309 TGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP 368
T ++YGF+ +D A+++ N G + + + + +
Sbjct: 239 T-------------------------VSYGFNDDSDVTAKNITFNKMGCASFDVYKSDKK 273
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
L ++L +PG HNVLN+LA I L I DK LSK G +RF+ G
Sbjct: 274 LFSLTLNVPGKHNVLNALASICVSLIFNIADKDTVE--------GLSKCKGAHKRFEYKG 325
Query: 428 TIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ G + DD+AHHPTE++A L A Q+ + + VFQPHTY+R L D+F + +E
Sbjct: 326 ELNGVTVIDDYAHHPTEIKATLNTA-QKIDHNKVYCVFQPHTYTRTKTLFDEFTHCFNEC 384
Query: 488 DQVVV 492
D++++
Sbjct: 385 DELIL 389
>gi|240144337|ref|ZP_04742938.1| UDP-N-acetylmuramate--alanine ligase [Roseburia intestinalis L1-82]
gi|257203680|gb|EEV01965.1| UDP-N-acetylmuramate--alanine ligase [Roseburia intestinalis L1-82]
gi|291540809|emb|CBL13920.1| UDP-N-acetylmuramate--L-alanine ligase [Roseburia intestinalis
XB6B4]
Length = 459
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 150/424 (35%), Positives = 221/424 (52%), Gaps = 40/424 (9%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
N+ IHF+GIGG +S LA++ L++ F +SGSD S L GA + G N+
Sbjct: 7 NQPLHIHFIGIGGISMSGLAEILLEEHFAISGSDAKESELTRHLEHMGARIFYGQKAENL 66
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYN-LIAVSGSHG 191
DG + +V ++AI +DN E AK +P+ R L ++ + YN IAV+G+HG
Sbjct: 67 --TDGI---DLIVYTAAIREDNPEYAAAKERSIPMLSRAELLGQIMDNYNNSIAVAGTHG 121
Query: 192 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPS 251
K+TT SM++ +L A D T VG + + +G+I G FV EA EY FL P
Sbjct: 122 KTTTTSMISQILLAAKADPTISVGG-ILKAIEGNIKVGKSDIFVSEACEYTNSFLHFYPR 180
Query: 252 VAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
+V+ N++ EH+D F+D +++ FR+F + G ++I G +I+ T L
Sbjct: 181 YSVILNVEAEHLDFFKDIQDIRNSFRKFAGNTKKDGAIIING----------EIENYTEL 230
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQ 371
G D ++IT+G + D+Y + + + + G P+
Sbjct: 231 T---------------SGLDPQVITFGLNDSCDYYPSDITFDETACASFTAMHHGTPVMD 275
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG 431
+ L +PG+HNV N+LA IA L L S + LS F G RRF G + G
Sbjct: 276 VKLHVPGMHNVSNALAAIALSLDL-------GISTDAILAGLSAFGGADRRFQYKGCVDG 328
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
I DD+AHHPTE+RA L AA+ +P+K L+ FQPHTYSR DDFA+ LS AD VV
Sbjct: 329 VTIIDDYAHHPTEIRATLTAAKN-YPHKRLVLAFQPHTYSRTKAFLDDFADVLSMADVVV 387
Query: 492 VSAV 495
++ +
Sbjct: 388 LADI 391
>gi|224826079|ref|ZP_03699182.1| UDP-N-acetylmuramate/alanine ligase [Pseudogulbenkiania
ferrooxidans 2002]
gi|224601716|gb|EEG07896.1| UDP-N-acetylmuramate/alanine ligase [Pseudogulbenkiania
ferrooxidans 2002]
Length = 463
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 155/434 (35%), Positives = 225/434 (51%), Gaps = 50/434 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K+R IHFVGIGG G+ +A++ L G+ VSGSD+ S+ + L+ GA +H GH +
Sbjct: 1 MKHRVKHIHFVGIGGVGMCGIAEVLLNLGYTVSGSDMAESAATKRLVAQGAVVHFGHDAA 60
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
+QG D VV S+A+ DN E++ AK+ +P+ R LA+L IA++G+H
Sbjct: 61 YMQGAD------VVVTSTAVKADNPEVVEAKARHIPVIPRAMMLAELMRFKQGIAIAGTH 114
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S+ A VL A G D T ++G + + G G+ V EADE D FL L+P
Sbjct: 115 GKTTTTSLTASVLAAAGLDPTFVIGGKLTAAGTNAKL-GSGEFLVAEADESDASFLHLAP 173
Query: 251 SVAVVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
+AVVTN+D +H+D +E D +K F FL ++ G V+C D R +L ++ +
Sbjct: 174 VMAVVTNIDADHMDTYEHSFDKLKQAFVDFLHRLPFYGRAVLCLDDANVREILPRVTK-- 231
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDY--ILCERGR 367
+ TYGFS D A +V GG + ++ G
Sbjct: 232 -----------------------PVTTYGFSDDADVQAANV--RAVGGQMHFDVVARNGN 266
Query: 368 PLA-QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
L + L +PG HNVLN+L+ IA L D +A ++ L++F GV RRF
Sbjct: 267 QLHFPVVLNLPGRHNVLNALSAIAIGLECGAD-------VASIQQGLAEFAGVGRRFQRY 319
Query: 427 GTIY---GCH--IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFA 481
G + G H + DD+ HHP E+ A L A R FP + L+ FQPH Y+R L +DF
Sbjct: 320 GEVACPSGGHFTLVDDYGHHPVEMAATLAAVRGAFPAQRLVLAFQPHRYTRTRDLFEDFV 379
Query: 482 NALSEADQVVVSAV 495
LS D +++S V
Sbjct: 380 KVLSTVDVLLLSEV 393
>gi|417556227|ref|ZP_12207286.1| UDP-N-acetylmuramate--L-alanine ligase [Gardnerella vaginalis
315-A]
gi|333602722|gb|EGL14147.1| UDP-N-acetylmuramate--L-alanine ligase [Gardnerella vaginalis
315-A]
Length = 503
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 151/430 (35%), Positives = 231/430 (53%), Gaps = 34/430 (7%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G +HF+GIGG+G+S LA++ ++G EVSG D + + L E G N+ IG S S+I+ +
Sbjct: 22 GSVHFIGIGGAGMSVLAEMLHEEGVEVSGCDCQENDHTRRLEELGINVKIGQSASHIKNS 81
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D +V SSAI N EI+ A GV + R L+ L + V+G+HGK+TT
Sbjct: 82 D------ILVYSSAIKPSNPEIIAAYQNGVKLVHRSDILSLLLSAKRGVTVAGAHGKTTT 135
Query: 196 ASMLAYVLKAMGD----DLTAIVGAHVPQFPDGSIFYGG----GKNFVLEADEYDGCFLG 247
+S+LA++L+ G D + +G + Q DG GG G V EADE DG F
Sbjct: 136 SSLLAHILRVCGKGDLADPSYAIGGSI-QAQDGGEIDGGHAGSGIVMVAEADESDGSFEK 194
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
+P +A+VTN++ +H+D + + +S F L GH+VIC D AR++LD +
Sbjct: 195 YNPYIAIVTNVEADHLDHYGNAQNYRSAFVEHLSHAL--GHIVICADDDGARAVLDALSD 252
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDW-YAESVCPNVQGGSDYILCERG 366
D+ LK + SN+ + ++ SF + + E GS+ + E
Sbjct: 253 DS-LKKTIVYTSNKD--------NVSLLNDRVKSFVKFAFIEHESEKTGSGSESFVIEFN 303
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
++L IPG+HN N+ A I + L + + + S F G SRRFD+
Sbjct: 304 GDFIDVNLIIPGLHNARNACAAIIAAMLLGMSPKDAADG-------ASSFRGASRRFDIR 356
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G + G + DD+AHHPTE+ A+L+AAR+R+PN ++ +FQPH +SR +FA+ALS
Sbjct: 357 GCVNGVTVVDDYAHHPTEIDALLRAARRRYPNASIRVLFQPHLFSRTRSFAHEFASALSL 416
Query: 487 ADQVVVSAVL 496
AD V+V+ +
Sbjct: 417 ADDVIVTGIF 426
>gi|308235553|ref|ZP_07666290.1| UDP-N-acetylmuramate--L-alanine ligase [Gardnerella vaginalis ATCC
14018 = JCM 11026]
gi|311114359|ref|YP_003985580.1| UDP-N-acetylmuramate--L-alanine ligase [Gardnerella vaginalis ATCC
14019]
gi|385801996|ref|YP_005838399.1| UDP-N-acetylmuramate--L-alanine ligase [Gardnerella vaginalis
HMP9231]
gi|415702633|ref|ZP_11458779.1| UDP-N-acetylmuramate--alanine ligase [Gardnerella vaginalis 284V]
gi|415705609|ref|ZP_11460880.1| UDP-N-acetylmuramate--alanine ligase [Gardnerella vaginalis 75712]
gi|310945853|gb|ADP38557.1| UDP-N-acetylmuramate--L-alanine ligase [Gardnerella vaginalis ATCC
14019]
gi|333393250|gb|AEF31168.1| UDP-N-acetylmuramate--L-alanine ligase [Gardnerella vaginalis
HMP9231]
gi|388052331|gb|EIK75355.1| UDP-N-acetylmuramate--alanine ligase [Gardnerella vaginalis 75712]
gi|388053179|gb|EIK76170.1| UDP-N-acetylmuramate--alanine ligase [Gardnerella vaginalis 284V]
Length = 503
Score = 234 bits (597), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 151/430 (35%), Positives = 231/430 (53%), Gaps = 34/430 (7%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G +HF+GIGG+G+S LA++ ++G EVSG D + + L E G N+ IG S S+I+ +
Sbjct: 22 GSVHFIGIGGAGMSVLAEMLHEEGVEVSGCDCQENDHTRRLEELGINVKIGQSASHIKNS 81
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D +V SSAI N EI+ A GV + R L+ L + V+G+HGK+TT
Sbjct: 82 D------ILVYSSAIKPSNPEIIAAYQNGVKLVHRSDILSLLLSAKRGVTVAGAHGKTTT 135
Query: 196 ASMLAYVLKAMGD----DLTAIVGAHVPQFPDGSIFYGG----GKNFVLEADEYDGCFLG 247
+S+LA++L+ G D + +G + Q DG GG G V EADE DG F
Sbjct: 136 SSLLAHILRVCGKGDLADPSYAIGGSI-QAQDGGEIDGGHAGSGIVMVAEADESDGSFEK 194
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
+P +A+VTN++ +H+D + + +S F L GH+VIC D AR++LD +
Sbjct: 195 YNPYIAIVTNVEADHLDHYGNAQNYRSAFVEHLSHAL--GHIVICADDDGARAVLDALSD 252
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDW-YAESVCPNVQGGSDYILCERG 366
D+ LK + SN+ + ++ SF + + E GS+ + E
Sbjct: 253 DS-LKKTIVYTSNKD--------NVSLLNDRVKSFVKFAFIEHESEKTGSGSESFVIEFN 303
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
++L IPG+HN N+ A I + L + + + S F G SRRFD+
Sbjct: 304 GDFIDVNLIIPGLHNARNACAAIIAAMLLGMSPKDAADG-------ASSFRGASRRFDIR 356
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G + G + DD+AHHPTE+ A+L+AAR+R+PN ++ +FQPH +SR +FA+ALS
Sbjct: 357 GCVNGVTVVDDYAHHPTEIDALLRAARRRYPNASIRVLFQPHLFSRTRSFAHEFASALSL 416
Query: 487 ADQVVVSAVL 496
AD V+V+ +
Sbjct: 417 ADDVIVTGIF 426
>gi|147678195|ref|YP_001212410.1| UDP-N-acetylmuramate--L-alanine ligase [Pelotomaculum
thermopropionicum SI]
gi|189029016|sp|A5D144.1|MURC_PELTS RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|146274292|dbj|BAF60041.1| UDP-N-acetylmuramate-alanine ligase [Pelotomaculum
thermopropionicum SI]
Length = 461
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 147/426 (34%), Positives = 221/426 (51%), Gaps = 46/426 (10%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
++K +HF+GIGGSG++ +A + L G+ V+GSDL S+ L GA + H+ N+
Sbjct: 2 DKKRHVHFIGIGGSGMNGIAAIMLGLGYRVTGSDLKPSAATRRLEALGATCYTRHAEENL 61
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
D VVAS+AIP DN+E++ A+ G+P+ R LA L + IAV+G+HGK
Sbjct: 62 GDAD------LVVASTAIPPDNIELVEARKRGLPVMHRADLLAWLMRRQKGIAVAGAHGK 115
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+TT SM A VL+ G D T ++G + + G+ G G+ V EADE DG FL L P +
Sbjct: 116 TTTTSMTALVLEKNGMDPTIVIGGELSEI-GGNAKLGRGEYLVAEADESDGSFLKLDPVI 174
Query: 253 AVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
++TN++ +H+D + + + + FRRF+ ++ G V C D R LL
Sbjct: 175 EIITNIEDDHLDYYRSVENILAAFRRFMAKVPESGLAVACLDDPRLRELL---------- 224
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAE---SVCPNVQGGSDYILCERGRPL 369
G+D +TY + Y + V G Y RG L
Sbjct: 225 ---------------AGYDRPCLTYALDNPEADYTMRNIRLMRQVTAGDVYY---RGGFL 266
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
+ L +PG HN+ N++A +A V +G + E IA L F G RRF L G +
Sbjct: 267 GCLELSVPGRHNLSNAMAAVA-VGRFVG---LAFEGIAA---ALKDFRGAGRRFQLTGEV 319
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
G + DD+AHHP+E++A L+AA Q ++ VFQPH Y+R + L + F A +AD
Sbjct: 320 NGIKVIDDYAHHPSEIKATLKAAGQ-VKTGRVVGVFQPHRYTRTLFLGERFGEAFEDADV 378
Query: 490 VVVSAV 495
V++S +
Sbjct: 379 VIISDI 384
>gi|158522796|ref|YP_001530666.1| UDP-N-acetylmuramate--alanine ligase [Desulfococcus oleovorans
Hxd3]
gi|229486488|sp|A8ZXW2.1|MURC_DESOH RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|158511622|gb|ABW68589.1| UDP-N-acetylmuramate--alanine ligase [Desulfococcus oleovorans
Hxd3]
Length = 457
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 154/415 (37%), Positives = 216/415 (52%), Gaps = 40/415 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
I+FVGIGG G+S +A+L L G+ VSGSD+ S + L G + GH NI G D
Sbjct: 8 IYFVGIGGIGMSGIAELLLNLGYTVSGSDIRQSDITDRLTGLGGKIFYGHDGKNIGGAD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSAI DN E+ A+ G+P+ R LA++ I ++G+HGK++T S
Sbjct: 67 -----VVVVSSAIAADNPEVAAAREAGIPVIPRAEMLAEILRLKYSIVIAGAHGKTSTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A VL G D T ++G + ++ G G V EADE DG FL SPS+AVVTN
Sbjct: 122 MVASVLGQGGMDPTVVIGGKLKSIGTNAVL-GHGDYIVAEADESDGSFLKFSPSIAVVTN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D EH+D + D A+ F FL +I G V+C D++ ++L+ IK+
Sbjct: 181 IDREHLDFYPDLAAISKSFLEFLDRIPFYGVAVVCLDNEPLQALVPLIKK---------- 230
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
+ ITYG S+ D A + P + G + + R L I L +P
Sbjct: 231 ---------------RFITYGTSNQADLQARHITP-INGKVRFSVVWRQEELGTIDLGVP 274
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD 437
G HNV N+LA +A L L + A +K L GV RR + G G + DD
Sbjct: 275 GFHNVRNALAAVAVGLEL-------GLAFAVIKEALETMAGVQRRLEKKGETGGVIVVDD 327
Query: 438 FAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+ HHPTE++A LQ RQ + ++ ++ VFQPH YSR L DDF A + D++VV
Sbjct: 328 YGHHPTEIKATLQGVRQHWEDRRVVVVFQPHRYSRTKALFDDFTRAFYQCDELVV 382
>gi|269792484|ref|YP_003317388.1| UDP-N-acetylmuramate--L-alanine ligase [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269100119|gb|ACZ19106.1| UDP-N-acetylmuramate/alanine ligase [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 483
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 151/413 (36%), Positives = 218/413 (52%), Gaps = 35/413 (8%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH +GIGG+G+S LA L G V+G D ++Y++ L + G + +GH ++
Sbjct: 15 IHLMGIGGAGMSGLALLLKDMGLSVTGCDAARTTYIKKLSQRGVEVLMGHDGEHLD---- 70
Query: 138 SRF-PNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
RF P+ +V +SAI + EI A+ +G+ I KR L+ + I V+G+HGK+TT+
Sbjct: 71 -RFSPDLLVYTSAIDDSHPEIQRARELGIRIAKRAEVLSAIFNHRRGIGVAGTHGKTTTS 129
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SMLA V++ T +G + + G G V E DE DG F SP VAVVT
Sbjct: 130 SMLALVMERCDMSPTVAIGGELCDIGCNAKL-GSGDVMVAELDESDGSFELFSPQVAVVT 188
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N+DW+HVD + D V F RF+ +I+ GG LVIC + + +L+ I+ SGG
Sbjct: 189 NVDWDHVDHYASVDQVTDAFVRFVGKIKDGGALVICAEDGGNQRVLNGIQ-------SGG 241
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
D +I YG+ + DW A +V P GG + + RG ISL +
Sbjct: 242 --------------DVHVIRYGWGTSWDWGAVNVHPLKGGGIEADVYRRGELRGHISLSV 287
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
G HNVLN+LA A V L G S ES+A + L F G RR +G+ G + D
Sbjct: 288 SGEHNVLNALATCA-VADLFG---VSFESVAKV---LKSFRGAKRRLQRVGSADGIDVLD 340
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
D+ HHP E++A + A R P + ++ VFQPH Y+R + DFA+ L+ AD+
Sbjct: 341 DYGHHPREIKATISAVRGALPGRRILVVFQPHRYTRTQAMYRDFASVLALADR 393
>gi|397654380|ref|YP_006495063.1| UDP-N-acetylmuramate--L-alanine ligase [Corynebacterium ulcerans
0102]
gi|393403336|dbj|BAM27828.1| UDP-N-acetylmuramate--L-alanine ligase [Corynebacterium ulcerans
0102]
Length = 485
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 151/432 (34%), Positives = 235/432 (54%), Gaps = 50/432 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSN--IQGN 135
+H +GIGG+G+S +A++ L +G VSGSD+ S + L GA++ +GH+ N I G
Sbjct: 13 VHLIGIGGAGMSGVARILLSRGATVSGSDVKDSRPVLALRSMGAHVAVGHAAENLTIAGE 72
Query: 136 DGSRFPNAVVAS-SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKST 194
+ P VV S +AIPQDN E++ A+ G+P+ +R L +L E + ++G+HGK++
Sbjct: 73 E----PTVVVTSFAAIPQDNPELVAARERGIPVIRRSDLLGELMEGSTQVLIAGTHGKTS 128
Query: 195 TASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAV 254
T SM ++A G D + +G + + + G G FV EADE D L P+VAV
Sbjct: 129 TTSMAVVAMQAAGMDPSFAIGGQLNKAGTNA-HQGTGDAFVAEADESDASLLRYKPNVAV 187
Query: 255 VTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYS 314
+TN++ +H+D F+ E+A +F +F +++ GG LV+C D D
Sbjct: 188 ITNIEPDHLDFFKSEEAYFEVFEKFAERLVPGGSLVVCLD-------------DPHTAIL 234
Query: 315 GGVVSNQSSDLWGQGHDYKIITYGFSSFNDWY---AESVCPNVQ---GGSDYILCERGRP 368
G V + SD+ K++ YG S+ Y A++V + + G+ + +G+
Sbjct: 235 GQKVHEEHSDI-------KVVGYGTSAAAAEYPDIAKTVVKSFEVTHSGTVATISVQGKE 287
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
+ ++ L+ PG H VLN+ A + + G+ ++ L +S F GV RRF+ GT
Sbjct: 288 V-EVVLRTPGQHMVLNAAAALTAGVIAGGE-------LSKLAAGISDFSGVRRRFEYHGT 339
Query: 429 I-----YGCHIYDDFAHHPTEVRAVLQAARQRFPNKA---LIAVFQPHTYSRLVVLKDDF 480
+ G +YDD+AHHPTEV AVL AAR + + LI VFQPH YSR + D+F
Sbjct: 340 VAEGDFAGIELYDDYAHHPTEVTAVLTAARAKLQARGQGRLIVVFQPHLYSRTMNFVDEF 399
Query: 481 ANALSEADQVVV 492
A ALS AD+ +V
Sbjct: 400 ATALSLADEAIV 411
>gi|420155097|ref|ZP_14661966.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium sp. MSTE9]
gi|394759741|gb|EJF42433.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium sp. MSTE9]
Length = 463
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 232/429 (54%), Gaps = 44/429 (10%)
Query: 70 DFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSV 129
D ++ IHFVGIGGSG+ LA++ +GF+++GSD+ S ++ + G + +GH
Sbjct: 4 DILDQVKRIHFVGIGGSGMCPLAEILHHEGFKLTGSDVNESDTLDRIRSYGIPVSMGHKA 63
Query: 130 SNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSG 188
NI +V ++A+ DN E++ A+ G+P+ +R L +T +Y N IAVSG
Sbjct: 64 ENIGD------AQLLVYTAAVKHDNPELMAAEERGIPVVERSVMLGIVTCRYENSIAVSG 117
Query: 189 SHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGL 248
+HGK+TT +M+ V G D +AI+G +P G+ G + + EA EY FL L
Sbjct: 118 THGKTTTTAMITQVCIDGGVDPSAIIGGKLPAI-GGNGRVGKSQTIICEACEYVDTFLQL 176
Query: 249 SPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQI-RVGGHLVICGDSQCARSLLDQIKQ 307
+P+++V+ N+D +H+D F + + F +F Q R+ LVI GD R ++ I+
Sbjct: 177 TPAISVILNIDADHLDYFGTLENIIKSFHQFSSQTSRL---LVINGDDPNCRKAVEGIQ- 232
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR 367
+ +IIT+G + ND+ A + + + + + G
Sbjct: 233 -----------------------NARIITFGMNPDNDYAAGGISDLPKACESFSVYKHGE 269
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
L+ ++L +PG HN++N+LA A L D + + ES L +F GV RRF+++G
Sbjct: 270 KLSDVTLSVPGKHNIMNALAAAAVSDYLGIDPKTAAES-------LGRFTGVHRRFEILG 322
Query: 428 TIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
G + DDFAHHPTE+ A L AA R A+ A+FQPHTYSR +L DDFA ALS
Sbjct: 323 KFDGVTVADDFAHHPTELTATLTAA-SRMGFHAVWALFQPHTYSRTYLLLDDFAKALSIP 381
Query: 488 DQVVVSAVL 496
+ VV+S +L
Sbjct: 382 EHVVLSPIL 390
>gi|261414976|ref|YP_003248659.1| UDP-N-acetylmuramate--L-alanine ligase [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|385789936|ref|YP_005821059.1| UDP-N-acetylmuramate--L-alanine ligase [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|261371432|gb|ACX74177.1| UDP-N-acetylmuramate/alanine ligase [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|302325875|gb|ADL25076.1| UDP-N-acetylmuramate--L-alanine ligase [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 460
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 140/424 (33%), Positives = 226/424 (53%), Gaps = 42/424 (9%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
R +HFVGIGG+G+S +A++ + GF V+GSD+ + ++ L G + H N+
Sbjct: 7 KRVRRLHFVGIGGAGMSGIAEVLHENGFVVTGSDMGEGAVIDYLKGLGIRIDPKHEAKNV 66
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
D VV SSAIP DN E++ A++ +P+ +R L +L ++++G+HGK
Sbjct: 67 ADAD------LVVYSSAIPFDNPELVEARARRIPVIRRAEMLGELMRLKYTLSIAGTHGK 120
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+TT S++ + + G D T IVG V G+ G G + E+DE+D FL + PS
Sbjct: 121 TTTTSIVGAIWEEAGLDPTIIVGGIVKGKCSGAKV-GHGDYLIAESDEFDRSFLSMMPSS 179
Query: 253 AVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
A++TN+D +H+D +E+ DA+K F +F +I G +++C D + +L +K+
Sbjct: 180 AIITNIDADHLDTYENIDAIKDAFTQFANKIPFYGQVIVCLDDPNVQQILSHLKK----- 234
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDY-ILCERGRPLAQ 371
+ITYGF+ + E++ V+G + I+C+ + L Q
Sbjct: 235 --------------------PVITYGFTRQAKYRVENLV-FVKGYPQFEIVCDV-KSLGQ 272
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG 431
LQIPG HNVLN+ A +A + + SI + ++ F GV RRF+ IG G
Sbjct: 273 FKLQIPGRHNVLNATAAVALAV-------EEGISIEVARKAVAAFEGVKRRFEFIGEKNG 325
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
++DD+AHHPTE A L R+ FP+K +I FQPH ++R + F +A S D ++
Sbjct: 326 VMVFDDYAHHPTEATATLLGFREAFPDKRIIVAFQPHLFTRTRDQHEAFGSAFSNCDVLL 385
Query: 492 VSAV 495
V+ +
Sbjct: 386 VTDI 389
>gi|326202446|ref|ZP_08192315.1| UDP-N-acetylmuramate/alanine ligase [Clostridium papyrosolvens DSM
2782]
gi|325987564|gb|EGD48391.1| UDP-N-acetylmuramate/alanine ligase [Clostridium papyrosolvens DSM
2782]
Length = 467
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 149/420 (35%), Positives = 227/420 (54%), Gaps = 42/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGGS +S LA++ L +G++VSGSD+ S + L GA + IGHS NI
Sbjct: 16 VHFIGIGGSSMSGLAEILLAKGYQVSGSDIKSSHATQKLESKGAEIFIGHSAENINA--- 72
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTTA 196
P+ V + A+ DN E++ +K +G+P+ R L L +K++ IAV+G+HGK+TT
Sbjct: 73 ---PDLTVYTVAVKDDNPEMIQSKELGIPVIDRAELLGLLMKKHSFGIAVAGTHGKTTTT 129
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM+ ++ D TA +G + G+ GG + F+ EA EY G FL P +AVV
Sbjct: 130 SMITTIMLEANTDPTAHIGGELDCIG-GNTRIGGSEYFITEACEYYGSFLKFHPFMAVVL 188
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +HVD F D + +KS F F+ + G++V C D + S++ +
Sbjct: 189 NIEVDHVDYFRDLEHIKSTFGEFVALVPRNGYIVACADDENTLSVVSK------------ 236
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFND-WYAESVCPNVQGGSDYILCERGRPLAQISLQ 375
D IITYG + + W A+ + N G + + + + G + +SL
Sbjct: 237 -------------RDCNIITYGLKNKDAMWTAKEITYNSMGCASFEVYKEGTKMGDVSLS 283
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
+PG HNV NSLA IA T S ++IA LS+F G +RF+L G + +
Sbjct: 284 VPGPHNVSNSLAAIAAAHTC----GCSMDNIA---YGLSRFGGSHKRFELKGLVDNIKVI 336
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHP+EV+A L AA+ NK + VFQPHTY+R D F+ + EAD +V++ +
Sbjct: 337 DDYAHHPSEVQATLNAAKSSDHNK-IWCVFQPHTYTRTRAFLDKFSESFGEADNIVITDI 395
>gi|415712261|ref|ZP_11464757.1| UDP-N-acetylmuramate--alanine ligase [Gardnerella vaginalis 55152]
gi|388057488|gb|EIK80320.1| UDP-N-acetylmuramate--alanine ligase [Gardnerella vaginalis 55152]
Length = 503
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 150/430 (34%), Positives = 231/430 (53%), Gaps = 34/430 (7%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G +HF+GIGG+G+S LA++ ++G EVSG D + + L E G N+ IG S S+++ +
Sbjct: 22 GSVHFIGIGGAGMSVLAEMLHEEGVEVSGCDCQENDHTRRLEELGINVKIGQSASHVKNS 81
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D +V SSAI N EI+ A GV + R L+ L + V+G+HGK+TT
Sbjct: 82 D------ILVYSSAIKPSNPEIIAAYQNGVKLVHRSDILSLLLSAKRGVTVAGAHGKTTT 135
Query: 196 ASMLAYVLKAMGD----DLTAIVGAHVPQFPDGSIFYGG----GKNFVLEADEYDGCFLG 247
+S+LA++L+ G D + +G + Q DG GG G V EADE DG F
Sbjct: 136 SSLLAHILRVCGKGDLADPSYAIGGSI-QAQDGGEIDGGHAGSGIVMVAEADESDGSFEK 194
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
+P +A+VTN++ +H+D + + +S F L GH+VIC D AR++LD +
Sbjct: 195 YNPYIAIVTNVEADHLDHYGNAQNYRSAFVEHLSHAL--GHIVICADDDGARAVLDALSD 252
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDW-YAESVCPNVQGGSDYILCERG 366
D+ LK + SN+ + ++ SF + + E GS+ + E
Sbjct: 253 DS-LKKTIVYASNKD--------NVSLLNDRVKSFVKFAFIEHESEKTGSGSESFVIEFN 303
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
++L IPG+HN N+ A I + L + + + S F G SRRFD+
Sbjct: 304 GDFIDVNLIIPGLHNARNACAAIIAAMLLGMSSKDAADG-------ASSFRGASRRFDIR 356
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G + G + DD+AHHPTE+ A+L+AAR+R+PN ++ +FQPH +SR +FA+ALS
Sbjct: 357 GCVNGVTVVDDYAHHPTEIDALLRAARRRYPNASIRVLFQPHLFSRTRSFAHEFASALSL 416
Query: 487 ADQVVVSAVL 496
AD V+V+ +
Sbjct: 417 ADDVIVTGIF 426
>gi|94501895|ref|ZP_01308405.1| UDP-N-acetylmuramate--alanine ligase [Oceanobacter sp. RED65]
gi|94425948|gb|EAT10946.1| UDP-N-acetylmuramate--alanine ligase [Oceanobacter sp. RED65]
Length = 485
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 152/426 (35%), Positives = 221/426 (51%), Gaps = 56/426 (13%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG G+ +A++ L QG+E+SGSDL S+ + L+ GA + GH N+
Sbjct: 22 IHFIGIGGVGMCGIAEVLLNQGYEISGSDLRQSAATDRLMSLGATIFFGHQSENV----- 76
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ N VV S+AI +N EI +A+ +PI +R LA+L + IAV+G+HGK+TT S
Sbjct: 77 -KEANVVVVSTAINVENPEIQYAQQNRIPIVRRAEMLAELMRYRHGIAVAGTHGKTTTTS 135
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A +L D T ++G + + GG + V EADE D FL L P V++VTN
Sbjct: 136 LVASILAEGDKDPTFVIGGRLTSAGTNAQL-GGSRYLVAEADESDASFLHLQPMVSIVTN 194
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
++ +H+D + D + VK F FL + G V+C + + R +L ++ +
Sbjct: 195 IEADHMDTYGGDFNRVKKTFIEFLHNLPFYGLAVLCIEDETIREILPEVSR--------- 245
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP----LAQI 372
++TYGFS D+YA+ + Q G Y RP QI
Sbjct: 246 ----------------PVVTYGFSDSADYYAQEIK---QEGI-YTSFTVKRPGDNKDLQI 285
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIA--CLKLPLSKFMGVSRRFDLIGTIY 430
L++PG HNVLN+L+ IA + E IA + L KF GV RRF + G
Sbjct: 286 RLRMPGRHNVLNALSAIAVA---------TDEGIADDAIIRALEKFQGVGRRFQICGEYP 336
Query: 431 ----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
+ DD+ HHPTEV + A R+ +P K L+ VFQPH Y+R L DDF LSE
Sbjct: 337 LQDDSVMLVDDYGHHPTEVAVTIDAIRKGWPEKRLLMVFQPHRYTRTRDLYDDFVQILSE 396
Query: 487 ADQVVV 492
D +V+
Sbjct: 397 VDSLVL 402
>gi|291535568|emb|CBL08680.1| UDP-N-acetylmuramate--L-alanine ligase [Roseburia intestinalis
M50/1]
Length = 459
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 149/424 (35%), Positives = 221/424 (52%), Gaps = 40/424 (9%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
N+ IHF+GIGG +S LA++ L++ F +SGSD S L GA + G N+
Sbjct: 7 NQPLHIHFIGIGGISMSGLAEILLEEHFAISGSDAKESELTRHLEHMGARIFYGQKAENL 66
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYN-LIAVSGSHG 191
DG + +V ++AI +DN E AK +P+ R L ++ + YN IAV+G+HG
Sbjct: 67 --TDGI---DLIVYTAAIREDNPEYAAAKERSIPMLSRAELLGQIMDNYNNSIAVAGTHG 121
Query: 192 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPS 251
K+TT SM++ +L A D T VG + + +G+I G F+ EA EY FL P
Sbjct: 122 KTTTTSMISQILLAAKADPTISVGG-ILKAIEGNIKVGKSDIFLSEACEYTNSFLHFYPR 180
Query: 252 VAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
+V+ N++ EH+D F+D +++ FR+F + G ++I G +I+ T L
Sbjct: 181 YSVILNVEAEHLDFFKDIQDIRNSFRKFAGNTKKDGAIIING----------EIENYTEL 230
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQ 371
G D ++IT+G + D+Y + + + + G P+
Sbjct: 231 T---------------SGLDPQVITFGLNDSCDYYPSDITFDKTACASFTAMHHGTPVMD 275
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG 431
+ L +PG+HNV N+LA IA L L S + LS F G RRF G + G
Sbjct: 276 VKLHVPGMHNVSNALAAIALSLDL-------GISTDAILAGLSAFGGADRRFQYKGCVDG 328
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
I DD+AHHPTE+RA L AA+ +P+K L+ FQPHTYSR DDFA+ LS AD VV
Sbjct: 329 VTIIDDYAHHPTEIRATLTAAKN-YPHKRLVLAFQPHTYSRTKAFLDDFADVLSMADVVV 387
Query: 492 VSAV 495
++ +
Sbjct: 388 LADI 391
>gi|168181017|ref|ZP_02615681.1| UDP-N-acetylmuramate--alanine ligase [Clostridium botulinum NCTC
2916]
gi|182668137|gb|EDT80116.1| UDP-N-acetylmuramate--alanine ligase [Clostridium botulinum NCTC
2916]
Length = 458
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 144/433 (33%), Positives = 225/433 (51%), Gaps = 58/433 (13%)
Query: 72 KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSN 131
K++ IHF+GIGG +S LA++ L F +SGSD+ S + L + GA+++IGH N
Sbjct: 7 KDKNKHIHFIGIGGISMSGLAEILLYHNFTISGSDMNSSPITKKLKDKGAHIYIGHKKEN 66
Query: 132 IQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAVSGS 189
I+ D +V ++AI DN EI+ AK + + R +L L + KYN IA+SG+
Sbjct: 67 IKDAD------LIVYTAAIASDNPEIIEAKEKNIKLMDRADFLGDLMKGYKYN-IAISGT 119
Query: 190 HGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLS 249
HGK+TT SML++V D T +VG ++ +G++ G F+ EA EY FL
Sbjct: 120 HGKTTTTSMLSHVALKANVDPTILVGGNL-DIINGNVRVGKSDFFITEACEYKSSFLKFF 178
Query: 250 PSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
P + + N+D +H+D + D + +K+ F +F+K I G+LV G+ + +S++ + +
Sbjct: 179 PYIGAILNIDADHLDYYRDLNDIKNAFSKFIKLIPKDGYLVAYGEDKNIQSIIKEANCN- 237
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSS-----FNDWYAESVCPNVQGGSDYILCE 364
+ITYG +S N Y E C N + + +
Sbjct: 238 ------------------------VITYGINSGDIQAHNIEYDEKACGN------FDVVK 267
Query: 365 RGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKL--PLSKFMGVSRR 422
+ L + L +PG HN+LNSLA I L ++ C + + F G RR
Sbjct: 268 DNQKLFSVKLNVPGKHNILNSLASICIGLA---------SNMKCKDIIEGIESFFGTHRR 318
Query: 423 FDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFAN 482
F+L G + DD+AHHPTE+ A L AA+ ++P+ L VFQPHTYSR + L DDF
Sbjct: 319 FELKGCKNNITVIDDYAHHPTEISATLDAAK-KYPHNKLFCVFQPHTYSRTLTLFDDFTK 377
Query: 483 ALSEADQVVVSAV 495
AD+++++ +
Sbjct: 378 CFDNADEIILADI 390
>gi|206901118|ref|YP_002250970.1| UDP-N-acetylmuramate--alanine ligase [Dictyoglomus thermophilum
H-6-12]
gi|254765999|sp|B5YEL2.1|MURC_DICT6 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|206740221|gb|ACI19279.1| UDP-N-acetylmuramate--alanine ligase [Dictyoglomus thermophilum
H-6-12]
Length = 464
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 151/419 (36%), Positives = 231/419 (55%), Gaps = 43/419 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+G+ G+G+SALA + ++G+EVSGSD+ + L G ++ GHS +I
Sbjct: 7 IHFIGVAGTGMSALAYICAEKGYEVSGSDIQENISTIRLKSKGVKIYRGHSPEHIN---- 62
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ VV SSAIP DN E ++AKS +PI R LA+LT++ I V G+HGK+TT S
Sbjct: 63 --DVDVVVVSSAIPPDNEEYVYAKSKNIPILHRSDLLAELTKEKKSIIVGGAHGKTTTTS 120
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A VL+ D T IVG + G+ G G+ V E DE DG L L+P + VVTN
Sbjct: 121 MIALVLENNKTDPTIIVGGELEDI-GGNAKLGSGEYLVAEGDESDGSILKLNPYILVVTN 179
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D +H+D +E+ + +KS F + ++++ G++++ D + R ++ +IK
Sbjct: 180 IDNDHLDYYENIENIKSTFLKVIEKVPEDGYVLLNLDCKNIRDIIGKIK----------- 228
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
D K TYGFS+ D+ A+++ N GS++ + R L ++ L++P
Sbjct: 229 -------------DKKYYTYGFSNA-DFTADNIVLN-SSGSEFDVYFRNVKLGRVKLKVP 273
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG-CHIYD 436
G HN+LNSL+ I L D Q+ ++ L KF GV RR G I ++D
Sbjct: 274 GRHNILNSLSAIGISYILGLDFEQTIKA-------LEKFHGVQRRIQFKGVIENDVLVFD 326
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+ HHPTE+ A L+ R N+ L+ VFQPH Y+R L + A+ALS +D V++ +
Sbjct: 327 DYGHHPTEILATLETL--RLYNRRLVVVFQPHRYTRTYFLSKEIADALSLSDVVILMEI 383
>gi|403745034|ref|ZP_10954062.1| UDP-N-acetylmuramate/alanine ligase [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121689|gb|EJY55966.1| UDP-N-acetylmuramate/alanine ligase [Alicyclobacillus hesperidum
URH17-3-68]
Length = 463
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 152/420 (36%), Positives = 226/420 (53%), Gaps = 45/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HFVGIGG G+SA+A++ L G++VSGSD+ + L GA ++ GH+ ++G D
Sbjct: 7 VHFVGIGGYGMSAIARVMLDLGYKVSGSDVSRQELTDKLAARGAQVYYGHAREQVEGAD- 65
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV S+A+ DNVEI AK+ +P+ R LA+L +AV+G+HGK+TT S
Sbjct: 66 -----IVVHSTAVQADNVEIQEAKARNIPVIHRSEMLARLMADRVGVAVTGAHGKTTTTS 120
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+AYV++ D T +VG V D + GGG+ V EADE DG FL P++AVVTN
Sbjct: 121 MIAYVMERNHLDPTFVVGGVVSNMGDNAK-AGGGRFVVAEADESDGSFLHYRPAIAVVTN 179
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
++ +H++ + D + +K ++ F+ QI G V+ D + R L K
Sbjct: 180 VEADHLEHYGGDFENLKQAYQTFISQIPEDGLAVLSADDEHLRELRKFAKS--------- 230
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESV-CPNVQGGSDYILCERGRPLAQISLQ 375
++ITYGF+ D A +V + SD + G + ++ L
Sbjct: 231 ----------------RVITYGFAEDADVQARNVQLFDRSSASDVYV--HGEFVGRLLLS 272
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
+PG HNV N+LA I L + + E IA + L +F G RRF +I I
Sbjct: 273 LPGRHNVANALAAIVVGL----EASLTFEQIA---VALVEFHGAKRRFQVISEKNDVLII 325
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHPTE+RA + AA+ + +IAVFQP Y+R L D FA + +EAD+V++S +
Sbjct: 326 DDYAHHPTEIRATIAAAKA--TGRRIIAVFQPQRYTRTYFLFDAFAKSFAEADEVIISEI 383
>gi|226951004|ref|YP_002806095.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium botulinum A2
str. Kyoto]
gi|254765991|sp|C1FNF4.1|MURC_CLOBJ RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|226844146|gb|ACO86812.1| UDP-N-acetylmuramate--alanine ligase [Clostridium botulinum A2 str.
Kyoto]
Length = 458
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 144/433 (33%), Positives = 225/433 (51%), Gaps = 58/433 (13%)
Query: 72 KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSN 131
K++ IHF+GIGG +S LA++ L F +SGSD+ S + L + GA+++IGH N
Sbjct: 7 KDKNKHIHFIGIGGISMSGLAEILLYHNFTISGSDMNSSPITKKLKDKGAHIYIGHKKEN 66
Query: 132 IQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAVSGS 189
I+ D +V ++AI DN EI+ AK + + R +L L + KYN IA+SG+
Sbjct: 67 IKDAD------LIVYTAAIASDNPEIIEAKEKNIKLMDRADFLGDLMKGYKYN-IAISGT 119
Query: 190 HGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLS 249
HGK+TT SML++V D T +VG ++ +G++ G F+ EA EY FL
Sbjct: 120 HGKTTTTSMLSHVALKANVDPTILVGGNL-DIINGNVRVGKSDFFITEACEYKSSFLKFF 178
Query: 250 PSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
P + + N+D +H+D + D + +K+ F +F+K I G+LV G+ + +S++ + +
Sbjct: 179 PYIGAILNIDADHLDYYRDLNDIKNAFSKFIKLIPKDGYLVAYGEDKNIQSIIKEANCN- 237
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSS-----FNDWYAESVCPNVQGGSDYILCE 364
+ITYG +S N Y E C N + + +
Sbjct: 238 ------------------------VITYGINSGDIQAHNIEYDEKACGN------FDVVK 267
Query: 365 RGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKL--PLSKFMGVSRR 422
+ L + L +PG HN+LNSLA I L ++ C + + F G RR
Sbjct: 268 DNQKLFSVKLNVPGKHNILNSLASICIGLA---------SNMKCKDIIEGIESFFGTHRR 318
Query: 423 FDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFAN 482
F+L G + DD+AHHPTE+ A L AA+ ++P+ L VFQPHTYSR + L DDF
Sbjct: 319 FELKGCKNNITVIDDYAHHPTEISATLDAAK-KYPHNKLFCVFQPHTYSRTLTLFDDFTK 377
Query: 483 ALSEADQVVVSAV 495
AD+++++ +
Sbjct: 378 CFDNADEIILADI 390
>gi|357053787|ref|ZP_09114879.1| UDP-N-acetylmuramate-L-alanine ligase [Clostridium clostridioforme
2_1_49FAA]
gi|355385413|gb|EHG32465.1| UDP-N-acetylmuramate-L-alanine ligase [Clostridium clostridioforme
2_1_49FAA]
Length = 461
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 232/429 (54%), Gaps = 41/429 (9%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DF N+ +HF+GIGG +S LA++ L +GF +SGSD ++ E L + GA ++ G
Sbjct: 4 IDF-NKPEHVHFIGIGGISMSGLAEILLDEGFSISGSDSHETALTERLEKKGARVYYGQR 62
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVS 187
+NI+ G + VV ++AI +DN E A+ G+P+ R L +L Y IA+S
Sbjct: 63 AANIEREPGI---SVVVYTAAIHEDNPEFRAARDQGLPMLSRAELLGELMRNYKEAIAIS 119
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT SML +L A D T VG + G+I GG FV EA EY FL
Sbjct: 120 GTHGKTTTTSMLTDILLAGDLDPTISVGGILKDI-GGNIRVGGPDLFVTEACEYTNSFLS 178
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P++ V+ N++ +H+D F+D + ++ FR F ++ G LV+ S ++++++
Sbjct: 179 FYPTMEVILNVEEDHLDFFKDIEDIRHSFRLFADKLPAKGLLVV-------NSGIEKVEE 231
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR 367
T +G + +++T+G + + A ++ + Y L +G
Sbjct: 232 IT------------------KGLNCRVVTFGKDLSSTYTARNITYDGFARPSYDLVIQGE 273
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
+++I+L + G HNV NSLA IA L L +G + L KF G RRF+
Sbjct: 274 AVSRITLGVTGEHNVYNSLAAIAVALELGVG--------FDAIMSGLGKFTGTDRRFEKK 325
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G + G + DD+AHHP E+RA L AAR +P++ L VFQPHTY+R D FA ALS
Sbjct: 326 GEVAGVTVIDDYAHHPQEIRATLAAARN-YPHRKLWCVFQPHTYTRTRAFLDQFAEALSA 384
Query: 487 ADQVVVSAV 495
AD+V+++ +
Sbjct: 385 ADEVILADI 393
>gi|83858914|ref|ZP_00952436.1| UDP-N-acetylmuramate--L-alanine ligase [Oceanicaulis sp. HTCC2633]
gi|83853737|gb|EAP91589.1| UDP-N-acetylmuramate--L-alanine ligase [Oceanicaulis sp. HTCC2633]
Length = 467
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 156/431 (36%), Positives = 239/431 (55%), Gaps = 42/431 (9%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+D G +HFVGIGG G+S +A++ L G++V+GSD+ S+ ++ L E GA +HIGH+
Sbjct: 4 IDLAASVGPVHFVGIGGIGMSGIAEVMLTLGYKVTGSDIKDSANVQRLREKGAVVHIGHA 63
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSG 188
N++G A+V SSA+ +DN E++ A++ P+ +R LA+L + +AV+G
Sbjct: 64 AENVEGA------GALVVSSAVKKDNPELVAARAKRTPVVRRAEMLAELMRLKHAVAVAG 117
Query: 189 SHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGL 248
+HGK+TT S++A ++ A G D T I G + + + G G+ V+EADE DG FL L
Sbjct: 118 THGKTTTTSLVACLMDAAGFDPTVINGGIISAYGSNAKI-GEGEWMVVEADESDGSFLKL 176
Query: 249 SPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQD 308
SV ++TN+D EH++ + DA++ F +F++ + G V+C D ++L +I+
Sbjct: 177 RGSVGIITNIDPEHMEHYGSFDALRDAFAQFVENLPFYGFAVLCIDHPEVQALAARIE-- 234
Query: 309 TGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS-DYILCERG- 366
D ++ITYGFS D ++ + GG D RG
Sbjct: 235 ----------------------DRRVITYGFSPQADVRLSNLVMDETGGHFDLTFQPRGI 272
Query: 367 RPL--AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFD 424
P+ A +SL + G HNVLN+ +A V L G + ++ + LS F GV RRF
Sbjct: 273 EPVTWAGMSLPMMGEHNVLNAAGALAVVQALGGGEEEA-------RTALSGFTGVKRRFT 325
Query: 425 LIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANAL 484
+ G +G + DD+ HHP E+ AVL+AARQR + AV QPH YSRL L +DF
Sbjct: 326 ITGQAHGVTVVDDYGHHPVEITAVLKAARQRVGAGRVHAVVQPHRYSRLHDLFEDFCTCF 385
Query: 485 SEADQVVVSAV 495
++AD V V+ V
Sbjct: 386 NDADSVWVTPV 396
>gi|118444708|ref|YP_877107.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium novyi NT]
gi|166222976|sp|A0PXK5.1|MURC_CLONN RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|118135164|gb|ABK62208.1| UDP-N-acetylmuramate--alanine ligase [Clostridium novyi NT]
Length = 458
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 141/427 (33%), Positives = 233/427 (54%), Gaps = 45/427 (10%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K+ +HF+GIGG +S LA++ L G+ VSGSD S + L GA ++IGH+ +
Sbjct: 6 LKDNNKKVHFIGIGGISMSGLAEILLNSGYRVSGSDRSESDLTKHLQAKGAEIYIGHNGN 65
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAVSG 188
N++ D VV ++AIP N E++ A+ + R +L + + KYN IA+SG
Sbjct: 66 NLKDVD------LVVYTAAIPDSNPELVKARECNIQTMDRAEFLGHVMQGHKYN-IAISG 118
Query: 189 SHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGL 248
+HGK+TT SM +++ + D T +VG ++ +G++ G + FV EA EY FL
Sbjct: 119 THGKTTTTSMFSHISLSANLDPTILVGGNLDVI-NGNVRVGNSEYFVTEACEYKASFLKF 177
Query: 249 SPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQD 308
P + V+ N++ +H+D ++D + +++ F +F K I G L++ D + + Q+
Sbjct: 178 YPYIGVILNIEADHLDFYKDINDIQNTFLKFAKLIPNDGFLIVNADDKRCVEVSKQV--- 234
Query: 309 TGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP 368
D +IT+G ++ D A+++ N G + +
Sbjct: 235 ----------------------DCNVITFGINN-GDVRAKNIVFN-NGRPTFDVYRNEEK 270
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
L ++L +PG HN+L++LA I++ L+L + + + LS F G RRF++ G
Sbjct: 271 LFTLTLNVPGNHNILDALASISSALSL-------NVPVDSIIEGLSTFNGAHRRFEIKGK 323
Query: 429 IYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
+ G + DD+AHHPTE++A L AA+ FP+K + VFQPHTYSR + L DDFAN+ S AD
Sbjct: 324 VDGITVVDDYAHHPTEIKAALNAAKN-FPHKRVFCVFQPHTYSRTISLFDDFANSFSNAD 382
Query: 489 QVVVSAV 495
+V++ +
Sbjct: 383 TLVLADI 389
>gi|253580421|ref|ZP_04857686.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251848151|gb|EES76116.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 467
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 147/428 (34%), Positives = 224/428 (52%), Gaps = 41/428 (9%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DF ++ IHF+GIGG +S LA++ L + F +SGSD S + L + GA ++ G
Sbjct: 12 IDF-HKPLHIHFIGIGGISMSGLAEILLGEDFVISGSDSKSSPLTQALEKKGATIYYGQR 70
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVS 187
+NI + + VV ++AI DN E AK G+P+ R L ++ Y+ +A+S
Sbjct: 71 ATNITDD-----VDVVVYTAAIHPDNPEFACAKEKGLPMLTRAELLGQIMRNYDTPVAIS 125
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT SM++++L A D T VG +P G+I G + FV EA EY FL
Sbjct: 126 GTHGKTTTTSMVSHILLAGDCDPTISVGGILPAI-GGNIRVGNSETFVTEACEYTNSFLS 184
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P ++++ N+D +H+D F+D D ++ FRRF + + G L+I D+ ++ +
Sbjct: 185 FFPKISIILNMDADHLDFFKDIDDIRHSFRRFAELLPADGTLIINADTPKYEDIIRDLPC 244
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR 367
+ +ITYG D+ A + + G + + + G
Sbjct: 245 N-------------------------VITYGLEHDADYQAADITYDKYGHASFSVLRNGV 279
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
+ L++PG+HNV N+LA IA + L+G + + L F G RRF G
Sbjct: 280 KVGSYYLKVPGIHNVSNALAAIA-LGHLLGLSEE------VIIKGLGSFTGTDRRFQYKG 332
Query: 428 TIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ G I DD+AHHPTE+ A L AA +P+K L VFQPHTY+R L +FA ALS A
Sbjct: 333 EVAGVTIVDDYAHHPTEIEATLHAA-HNYPHKKLWCVFQPHTYTRTKALLPEFAKALSLA 391
Query: 488 DQVVVSAV 495
D VVV+ +
Sbjct: 392 DHVVVADI 399
>gi|421835097|ref|ZP_16269959.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium botulinum
CFSAN001627]
gi|409743338|gb|EKN42353.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium botulinum
CFSAN001627]
Length = 458
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 143/433 (33%), Positives = 225/433 (51%), Gaps = 58/433 (13%)
Query: 72 KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSN 131
K++ IHF+GIGG +S LA++ L F +SGSD+ S + L + GA+++IGH N
Sbjct: 7 KDKNKHIHFIGIGGISMSGLAEILLYHNFTISGSDMNSSPITKKLKDKGAHIYIGHKKEN 66
Query: 132 IQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAVSGS 189
++ D +V ++AI DN EI+ AK + + R +L L + KYN IA+SG+
Sbjct: 67 VKDAD------LIVYTAAIASDNPEIIEAKEKNIKLMDRADFLGNLMKGYKYN-IAISGT 119
Query: 190 HGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLS 249
HGK+TT SML++V D T +VG ++ +G++ G F+ EA EY FL
Sbjct: 120 HGKTTTTSMLSHVALKANVDPTILVGGNL-DIINGNVRVGKSDFFITEACEYKSSFLKFF 178
Query: 250 PSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
P + + N+D +H+D + D + +K+ F +F+K I G+LV G+ + +S++ + +
Sbjct: 179 PYIGAILNIDADHLDYYRDLNDIKNAFSKFIKLIPKDGYLVAYGEDKNIQSIIKEASCN- 237
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSS-----FNDWYAESVCPNVQGGSDYILCE 364
+ITYG +S N Y E C N + + +
Sbjct: 238 ------------------------VITYGINSGDIQAHNIEYDEKACGN------FDVVK 267
Query: 365 RGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKL--PLSKFMGVSRR 422
+ L + L +PG HN+LNSLA I L ++ C + + F G RR
Sbjct: 268 DNQKLFSVKLNVPGKHNILNSLASICIGLA---------SNMKCKDIIEGIESFFGTHRR 318
Query: 423 FDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFAN 482
F+L G + DD+AHHPTE+ A L AA+ ++P+ L VFQPHTYSR + L DDF
Sbjct: 319 FELKGCKNNITVIDDYAHHPTEISATLDAAK-KYPHNKLFCVFQPHTYSRTLTLFDDFTK 377
Query: 483 ALSEADQVVVSAV 495
AD+++++ +
Sbjct: 378 CFDNADEIILADI 390
>gi|375264447|ref|YP_005021890.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio sp. EJY3]
gi|369839771|gb|AEX20915.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio sp. EJY3]
Length = 485
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 146/439 (33%), Positives = 223/439 (50%), Gaps = 61/439 (13%)
Query: 67 CIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG 126
+V R IHF+GIGG+G+S +A++ L +G++++GSDL ++ E L GA ++IG
Sbjct: 14 AMVPEMRRVKSIHFIGIGGAGMSGIAEVLLNEGYQITGSDLAKNAVTERLAAKGATIYIG 73
Query: 127 HSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAV 186
H SN++ + VV S+AI ++N E+L A+ + +PI +R LA+L + IAV
Sbjct: 74 HQASNVEQ------ASVVVVSTAINEENPEVLAARELRIPIVRRAEMLAELMRFRHGIAV 127
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEA 238
+G+HGK+TT +++ + G D P F +G + G N + EA
Sbjct: 128 AGTHGKTTTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGSSRILIAEA 178
Query: 239 DEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQC 297
DE D FL L P V++VTN++ +H+D + D + +K F FL + G ++C D
Sbjct: 179 DESDASFLHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAIVCIDDPV 238
Query: 298 ARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG 357
R L+ +I + ++ITYGFS D E+ Q G
Sbjct: 239 VRELIPRISR-------------------------QVITYGFSEDADVRIENYRQEGQQG 273
Query: 358 SDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFM 417
+ + +GR I+L IPG HN LN+ A IA E A LK ++
Sbjct: 274 K-FTVVRKGRADLDITLNIPGRHNALNASAAIAVA------TEDDIEDDAILK-AMAGTQ 325
Query: 418 GVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRL 473
G RRFD +G + + DD+ HHPTEV + AAR + +K L+ +FQPH YSR
Sbjct: 326 GTGRRFDHLGEFDTGNGHAMLVDDYGHHPTEVGVTINAARSGWQDKRLVMIFQPHRYSRT 385
Query: 474 VVLKDDFANALSEADQVVV 492
L DDFAN L + D +++
Sbjct: 386 RDLYDDFANVLEQVDVLIM 404
>gi|452752894|ref|ZP_21952633.1| UDP-N-acetylmuramate--alanine ligase [alpha proteobacterium
JLT2015]
gi|451959716|gb|EMD82133.1| UDP-N-acetylmuramate--alanine ligase [alpha proteobacterium
JLT2015]
Length = 490
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 156/430 (36%), Positives = 232/430 (53%), Gaps = 45/430 (10%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
F G IHFVGIGG G+S +A++ GF+V GSD+ S +EGL + G +HIGH
Sbjct: 23 FSKALGTIHFVGIGGIGMSGIAEVMHNLGFKVQGSDIAESYVVEGLRDKGIAVHIGHKAE 82
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N+ + VV S+AI + N E+ A +P+ +R LA+L + +AV+G+H
Sbjct: 83 NVTE------ASVVVVSTAIKRGNPEVDAALEKRIPVVRRAEMLAELMRLKSNVAVAGTH 136
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT SM+A +L + D T I G + + + G V+EADE DG FL L P
Sbjct: 137 GKTTTTSMVAALLDSGKLDPTVINGGIINVYGTNARL-GTSDWMVVEADESDGSFLRLPP 195
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
++A+VTN+D EH+D + DA+K F F++ + G +C D +++L Q++
Sbjct: 196 TLAIVTNIDPEHLDHYGSFDAIKKAFVDFVEHVPFYGSAFLCIDDNDVQAILPQVR---- 251
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS-DYILCERG--- 366
D +++ YGFS+ D E+V PN G D +L R
Sbjct: 252 --------------------DRRVVPYGFSAQADIRGENVRPNPDGNRFDVVLRGRSGEQ 291
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
R + I L +PG HNVLN+L I + L I D+ ++ ++F GV RRF
Sbjct: 292 RRIDDIFLPMPGRHNVLNALGAIGVAVELGISDE--------AIREGFARFRGVKRRFTR 343
Query: 426 IGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
+G + G I DD+ HHP E+RAVLQAAR+ P + +IAV QPH Y+RL ++FA A +
Sbjct: 344 VGEVDGTTIIDDYGHHPIEIRAVLQAARESAPGR-VIAVCQPHRYTRLRDHMEEFATAFN 402
Query: 486 EADQVVVSAV 495
+AD + ++ V
Sbjct: 403 DADMIYLTPV 412
>gi|294506461|ref|YP_003570519.1| UDP-N-acetylmuramate--L-alanine ligase [Salinibacter ruber M8]
gi|294342789|emb|CBH23567.1| UDP-N-acetylmuramate--alanine ligase [Salinibacter ruber M8]
Length = 879
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 150/476 (31%), Positives = 241/476 (50%), Gaps = 52/476 (10%)
Query: 31 PLSFKSNRTAPSILLFMKKKNSVSVLTNC----TFKRNEECIVDFKNRKG-----WIHFV 81
P + R P L+ ++ + V + T + + + + + +H V
Sbjct: 364 PRRARPCRPLPHELIPIRSRRPVGICPGPAEPPTRPTRTDAMAELRTQPALGRIRQVHMV 423
Query: 82 GIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFP 141
GIGG G+S++A++ L +G+ V+GSDL S E L GA +H GH+ + D
Sbjct: 424 GIGGIGMSSIAEVLLNRGYTVTGSDLERSDVTERLEAEGATIHEGHAAEQVGTAD----- 478
Query: 142 NAVVASSAI-PQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLA 200
VV SSA+ P +N E A+ + + R L +L + V+G+HGK+TT SM
Sbjct: 479 -VVVYSSAVDPDENPETREAERRRISLIPRAEMLGELIRMKFGVGVAGTHGKTTTTSMAG 537
Query: 201 YVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDW 260
V+ G D T IVG V F +I G G V+EADEYD FL L+PS+AV+T+++
Sbjct: 538 LVVAEGGFDPTVIVGGKVTAFGSNAI-TGEGDVLVIEADEYDRTFLRLTPSLAVITSIEE 596
Query: 261 EHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSN 320
+H+D++ED A+++ F ++ + G ++C D ++++ +++
Sbjct: 597 DHLDVYEDLAAIQAAFTQYANSVPFFGAAILCLDDPNVQAIVGDVER------------- 643
Query: 321 QSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPLAQISLQIPGV 379
+++TYG + + E+V +G + + + RG L I L +PG+
Sbjct: 644 ------------RVVTYGTTRQAEVRGENV--RREGMTTRFDVVVRGERLGTIELHVPGM 689
Query: 380 HNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFA 439
HNV N+LA +A L S ++ L F GV RRF+ G + G + DD+A
Sbjct: 690 HNVRNALAAVAVGQEL-------EISFERVRDGLGTFTGVRRRFEKKGEVGGITVLDDYA 742
Query: 440 HHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
HHPTE+ A L AA Q FP++ ++AVFQPH YSR D+FA + AD +V++ V
Sbjct: 743 HHPTEIEATLDAAHQGFPDRRVVAVFQPHMYSRTQNFMDEFARSFFNADMLVLTDV 798
>gi|415706532|ref|ZP_11461521.1| UDP-N-acetylmuramate--alanine ligase [Gardnerella vaginalis 0288E]
gi|388054744|gb|EIK77679.1| UDP-N-acetylmuramate--alanine ligase [Gardnerella vaginalis 0288E]
Length = 503
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 149/430 (34%), Positives = 231/430 (53%), Gaps = 34/430 (7%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G +HF+GIGG+G+S LA++ ++G EVSG D + + L E G N+ IG S S+++ +
Sbjct: 22 GSVHFIGIGGAGMSVLAEMLHEEGVEVSGCDCQENDHTRRLEELGINVKIGQSASHVKNS 81
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
N +V SSAI N EI+ A GV + R L+ L + V+G+HGK+TT
Sbjct: 82 ------NILVYSSAIKPSNPEIIAAYQNGVKLVHRSDILSLLLSAKRGVTVAGAHGKTTT 135
Query: 196 ASMLAYVLKAMGD----DLTAIVGAHVPQFPDGSIFYGG----GKNFVLEADEYDGCFLG 247
+S+LA++L+ G D + +G + Q DG GG G V EADE DG F
Sbjct: 136 SSLLAHILRVCGKGDLADPSYAIGGSI-QAQDGGEIDGGHAGRGNVMVAEADESDGSFEK 194
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
+P +A+VTN++ +H+D + + +S F L G++VIC D AR++LD +
Sbjct: 195 YNPYIAIVTNVEADHLDHYGNAQNYRSAFVEHLSHAL--GYIVICADDDGARAVLDALSD 252
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDW-YAESVCPNVQGGSDYILCERG 366
D+ LK + SN+ + ++ SF + + E GS+ + E
Sbjct: 253 DS-LKKTIVYASNKD--------NVSLLNDRVKSFVKFAFIEHESEKTGSGSESFVIEFN 303
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
++L IPG+HN N+ A I + L + + + S F G SRRFD+
Sbjct: 304 GDFIDVNLIIPGLHNARNACAAIIAAMLLGMSPKDAADG-------ASSFRGASRRFDIR 356
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G + G + DD+AHHPTE+ A+L+AAR+R+PN ++ +FQPH +SR +FA+ALS
Sbjct: 357 GCVNGVTVVDDYAHHPTEIDALLRAARRRYPNASIRVLFQPHLFSRTRSFAHEFASALSL 416
Query: 487 ADQVVVSAVL 496
AD V+V+ +
Sbjct: 417 ADDVIVTGIF 426
>gi|111221632|ref|YP_712426.1| UDP-N-acetylmuramate--L-alanine ligase [Frankia alni ACN14a]
gi|123338790|sp|Q0RNN9.1|MURC_FRAAA RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|111149164|emb|CAJ60847.1| UDP-N-acetylmuramate--L-alanine ligase [Frankia alni ACN14a]
Length = 588
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 135/364 (37%), Positives = 205/364 (56%), Gaps = 41/364 (11%)
Query: 72 KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS--- 128
+ R +HF+GIGGSGLS LA++ L G +VSGSD S + L G + +G +
Sbjct: 3 RQRTQHVHFLGIGGSGLSPLAQIHLAGGGKVSGSDAEDSPRVATLRARGVPVRVGPAPAA 62
Query: 129 ---VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIA 185
+ + G D VVASSA+ +D+ EI+ A+S+G+ + +R WL +LT Y L+A
Sbjct: 63 EKIAAELAGVD------VVVASSALAEDHPEIVAARSLGLAVRRRSEWLPELTAGYRLVA 116
Query: 186 VSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCF 245
V+GSHGKSTT++ML VL+A G D TA++GA V Q G+ G G FVLE+DEY G F
Sbjct: 117 VAGSHGKSTTSAMLTLVLRAAGLDPTAVIGAEVSQL-GGNALAGSGDLFVLESDEYGGAF 175
Query: 246 LGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 305
GL P++AV+TN++WEH DIF DE +V++ F F +++R GG LV+CGD ++L ++
Sbjct: 176 AGLEPTIAVITNVEWEHPDIFPDEASVRTAFTAFARRVRPGGRLVVCGDDPGVAAVLAEL 235
Query: 306 KQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILC 363
+ G ++ YGF + W A V V G + ++
Sbjct: 236 HRQ------------------GTPAAAPVLDYGFGTDRRWRAVDVA-TVAGDDTARAVVL 276
Query: 364 ERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRF 423
G+ + ++L +PG H++LN+LAV+A L Q+ ++A + G +RRF
Sbjct: 277 HGGQEIGTLTLAVPGRHSLLNALAVLAVATELGVAPAQTLATLAT-------YTGAARRF 329
Query: 424 DLIG 427
+ +G
Sbjct: 330 EFVG 333
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 43/64 (67%)
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
+ I DD+AHHPTE+R L AAR R +AL AV QPHTYSR L D FA A ++AD+
Sbjct: 439 WSLEIIDDYAHHPTEIRLTLAAARARTHGRALWAVLQPHTYSRFAALLDGFATAFADADR 498
Query: 490 VVVS 493
V V+
Sbjct: 499 VYVT 502
>gi|294101819|ref|YP_003553677.1| UDP-N-acetylmuramate--L-alanine ligase [Aminobacterium colombiense
DSM 12261]
gi|293616799|gb|ADE56953.1| UDP-N-acetylmuramate/alanine ligase [Aminobacterium colombiense DSM
12261]
Length = 471
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 141/405 (34%), Positives = 216/405 (53%), Gaps = 35/405 (8%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH +GIGG+G+S LA L G++VSG D+ W+SY++ +++ + H ++ +D
Sbjct: 14 IHLMGIGGAGMSGLALLLKDLGYDVSGCDVNWTSYVDKVIQDNIGFVLHHGKEHL--DDF 71
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
S P+ +V SSAIP+DN E+LHAK G+P KR L+ + + I ++G+HGK+TT+S
Sbjct: 72 S--PDLIVYSSAIPEDNEELLHAKRRGIPTAKRGEVLSWIFDSQYGIGIAGTHGKTTTSS 129
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A +L+ G T +G + + G G V E DE DG F G P++AV+TN
Sbjct: 130 MIALILEQSGLSPTLAIGGELCDIGVNAKL-GEGPYMVAELDESDGSFEGFHPNIAVLTN 188
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
DW+HV+ + D+V F RFL + G +V+CG+ +LD+ LK
Sbjct: 189 ADWDHVNHYPTFDSVIEAFGRFLVNPKDDGVVVLCGEDVGLTRILDE----NHLKN---- 240
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
++ITYG+ S DW A +V GG + + + G+ + ++ L +
Sbjct: 241 ---------------EVITYGWGSAWDWGAYNVEHVPGGGVSFSVAKNGKFVDEVKLSVS 285
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD 437
G HN++N+LA ++ D+ + +K L F G RR IG+ G IYDD
Sbjct: 286 GDHNIMNALAA-----CVVADRLEV--PFPLIKKTLKTFRGAKRRLQYIGSTNGMDIYDD 338
Query: 438 FAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFAN 482
+ HHP E+ A L Q FP + L VFQPH +SR + DFA+
Sbjct: 339 YGHHPREIAATLNTLSQMFPERRLNVVFQPHRFSRTAAMYKDFAD 383
>gi|28897235|ref|NP_796840.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio parahaemolyticus
RIMD 2210633]
gi|28805444|dbj|BAC58724.1| UDP-N-acetylmuramate-alanine ligase [Vibrio parahaemolyticus RIMD
2210633]
Length = 490
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 145/432 (33%), Positives = 221/432 (51%), Gaps = 61/432 (14%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHF+GIGG+G+S +A++ L +G+E++GSDL + E L+ GA + IGH SN++
Sbjct: 26 RVKCIHFIGIGGAGMSGIAEVLLNEGYEITGSDLSENPVTERLVSKGATVFIGHQASNVE 85
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
+ VV S+AI ++N E++ A+ + +PI +R LA+L + IAV+G+HGK+
Sbjct: 86 K------ASVVVVSTAINEENPEVMAARELRIPIVRRAEMLAELMRFRHGIAVAGTHGKT 139
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEADEYDGCF 245
TT +++ + G D P F +G + G N + EADE D F
Sbjct: 140 TTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGSSRILIAEADESDASF 190
Query: 246 LGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 304
L L P V++VTN++ +H+D + D + +K F FL + G ++C D R L+ +
Sbjct: 191 LHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAIVCIDDPVIRELIPR 250
Query: 305 IKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE 364
I + ++ITYGFS D E+ Q G + +
Sbjct: 251 ISR-------------------------QVITYGFSDDADVRIENYHQEGQQGK-FTVVR 284
Query: 365 RGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFD 424
+GR I+L IPG HN LN+ A IA E A LK ++ G RRFD
Sbjct: 285 KGRANLDITLNIPGRHNALNASAAIAVA------TEDDIEDDAILK-AMAGTQGTGRRFD 337
Query: 425 LIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
+G + + DD+ HHPTEV ++AAR + +K L+ +FQPH YSR L DDF
Sbjct: 338 HLGEFDTGNGHAMLVDDYGHHPTEVDVTIKAARSGWQDKRLVMIFQPHRYSRTRDLYDDF 397
Query: 481 ANALSEADQVVV 492
AN L + D +++
Sbjct: 398 ANVLEQVDVLIM 409
>gi|403251367|ref|ZP_10917711.1| UDP-N-acetylmuramate-alanine ligase [actinobacterium SCGC
AAA027-L06]
gi|402915338|gb|EJX36317.1| UDP-N-acetylmuramate-alanine ligase [actinobacterium SCGC
AAA027-L06]
Length = 473
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 156/453 (34%), Positives = 233/453 (51%), Gaps = 50/453 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG+G+S +A++ L +GF VSGSD S+ + L GA + +GH+ NI ++
Sbjct: 23 IHFIGIGGAGMSGIARIMLAKGFTVSGSDKNDSAVLTSLRALGATIFVGHAPENITDSE- 81
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
V+ SSAI + N E+ A + G+PI R LA L + +AV+G+HGK+TT +
Sbjct: 82 -----LVIVSSAINEKNSELSSAIAKGLPIAARATALAWLMSESISVAVAGTHGKTTTTA 136
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
ML L++ G D + +G + + G G+ FV EADE DG FL PS A++TN
Sbjct: 137 MLTVALQSAGVDPSFAIGGTI-NTAGTNAHSGSGQIFVAEADESDGSFLAYRPSGAIITN 195
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
++ +HVD F E V +F +F++ I+ GG LV CGD + +LL QI +
Sbjct: 196 IELDHVDHFASEKEVFDVFLQFVESIKAGGFLVACGDDEGVNTLLKQITR---------- 245
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESV--CPNVQGGSDYILCERGRPLAQISLQ 375
D K+ YG S+ ND+ + + P S ++ GR + +++L
Sbjct: 246 ------------KDLKVYLYGKSAINDFRIDKIFLAPT---KSTSVVSNTGRKIGELNLS 290
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
+ G HN+LN+LA A Q E A + L F G RRF+L G + G +
Sbjct: 291 VAGEHNLLNALAAFAAACA-----LQIPEQKALIG--LETFTGTRRRFELKGEVSGIKVI 343
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+ HHPTE+ L AAR + ++ +FQPH YSR F+ AL AD
Sbjct: 344 DDYGHHPTELIVTLTAARNLAQSGRVLVIFQPHRYSRTAAFAMQFSKALELAD------- 396
Query: 496 LVFWLIIFAVSSFWLIMAINSVICIVRSMLPEK 528
+ L ++A S MA S + I +++ EK
Sbjct: 397 FTYLLEVYAASEKP--MAGVSSLLIAKNLSSEK 427
>gi|253681282|ref|ZP_04862080.1| UDP-N-acetylmuramate--alanine ligase [Clostridium botulinum D str.
1873]
gi|416349008|ref|ZP_11680568.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium botulinum C
str. Stockholm]
gi|253562520|gb|EES91971.1| UDP-N-acetylmuramate--alanine ligase [Clostridium botulinum D str.
1873]
gi|338196615|gb|EGO88801.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium botulinum C
str. Stockholm]
Length = 458
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 141/430 (32%), Positives = 228/430 (53%), Gaps = 51/430 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K+ IHF+GIGG +S LA++ L ++VSGSD S E L E GA ++IGH+
Sbjct: 6 LKDNNKKIHFIGIGGISMSGLAEILLNSKYKVSGSDRSESELTEHLREKGAEIYIGHNKD 65
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAVSG 188
NI+ D VV ++AIP N E++ A + +P R +L + + KYN IA+SG
Sbjct: 66 NIKNVD------LVVYTAAIPDSNPELVRAHELQIPTMDRAEFLGHVMQGHKYN-IAISG 118
Query: 189 SHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGL 248
+HGK+TT SML+++ + D T +VG ++ +G++ G FV EA EY FL
Sbjct: 119 THGKTTTTSMLSHITLSANLDPTILVGGNLDVI-NGNVRVGNSDYFVTEACEYKASFLKF 177
Query: 249 SPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQD 308
P + ++ N++ +H+D ++D + +++ F +F K I G L++ D + + ++
Sbjct: 178 YPYIGIILNIEADHLDFYKDINDIQNTFLKFAKLIPKDGFLIVNADDERCLDISKEV--- 234
Query: 309 TGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQ---GGSDYILCER 365
D IIT+G ++ E N++ G + +
Sbjct: 235 ----------------------DCNIITFGINN-----GEVRAKNIEFNNGRPTFDVYRN 267
Query: 366 GRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
L ++L +PG HN+L++LA I+ L+L D E LS F G RRF++
Sbjct: 268 NTKLFSLTLNVPGNHNILDALASISASLSLKVDTNSIIEG-------LSTFYGAHRRFEI 320
Query: 426 IGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
G + G + DD+AHHPTE++A L AA+ FP+ + +FQPHTYSR + L +DFA++
Sbjct: 321 KGKLNGITVVDDYAHHPTEIKAALNAAKN-FPHNKIFCIFQPHTYSRTISLFEDFADSFF 379
Query: 486 EADQVVVSAV 495
AD +V++ +
Sbjct: 380 NADTLVLADI 389
>gi|327399129|ref|YP_004339998.1| UDP-N-acetylmuramate--L-alanine ligase [Hippea maritima DSM 10411]
gi|327181758|gb|AEA33939.1| UDP-N-acetylmuramate--L-alanine ligase [Hippea maritima DSM 10411]
Length = 460
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 145/422 (34%), Positives = 228/422 (54%), Gaps = 46/422 (10%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
N +HFVGIGG G+S+LA+ L +G+ ++GSD+ +SY+E L + G +++GHS+SNI
Sbjct: 7 NNAKKVHFVGIGGVGMSSLAQYLLSKGYTITGSDVEENSYVEKLKKQGVKVYLGHSLSNI 66
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
+ + + VV SSA+ DN+E++ A + +P KR LA L N IAV+GSHGK
Sbjct: 67 EED-----VDLVVVSSAVKNDNIELIQADKLNIPTIKRYQLLAHLVNNSNSIAVAGSHGK 121
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+TT S+ A +LK D TAI+G + + ++ G ++EADE DG FL L+P +
Sbjct: 122 TTTTSLSASLLKNANLDPTAIIGGKLRNI-NNNVIIGKCNYLIVEADESDGGFLLLNPKI 180
Query: 253 AVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
++TN+D +H+ + + + K F F+ L+I D + + K+ L
Sbjct: 181 GLLTNIDNDHLGFYGNFENEKVAFYDFMDN---SEKLIINIDDPIIKQWKNLSKRQNLLT 237
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQI 372
YS + ++ +D++ Y I T S + + + + QI
Sbjct: 238 YS---IKSKKADVYA----YDIQTNAAYSI-----------------FSIKTPTKKIEQI 273
Query: 373 SLQIPGVHNVLNSLAVI--ATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
L+I G HN+ N+LAV+ A +L + D ++ LS+F GV RRF +G
Sbjct: 274 KLKIIGTHNISNALAVVCLAEILEIGED---------IIRKTLSEFEGVDRRFTYVGNYR 324
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+YDD+AHHPTE+R L+AA + +K + AVFQPH +SR L D+FA + +A +V
Sbjct: 325 NLKVYDDYAHHPTEIRETLKAA--KLISKNIYAVFQPHRFSRTAYLMDEFAGSFKDAKRV 382
Query: 491 VV 492
V
Sbjct: 383 FV 384
>gi|220930459|ref|YP_002507368.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium cellulolyticum
H10]
gi|220000787|gb|ACL77388.1| UDP-N-acetylmuramate/alanine ligase [Clostridium cellulolyticum
H10]
Length = 467
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 153/421 (36%), Positives = 229/421 (54%), Gaps = 42/421 (9%)
Query: 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGND 136
++HFVGIGGS +S LA++ L +G++VSGSD+ S+ + L GA + IGH NI D
Sbjct: 15 YVHFVGIGGSSMSGLAEILLAKGYKVSGSDIKSSNSTQKLEAKGAEIFIGHRSENITDQD 74
Query: 137 GSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTT 195
V + A+ +DN EI +K +G+P+ R L L +K++ IAV+G+HGK+TT
Sbjct: 75 ------LTVYTVAVKEDNPEITRSKELGLPVIDRAELLGLLMKKHSFGIAVAGTHGKTTT 128
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+ ++ D TA +G + G+ G + F+ EA EY G FL P +AVV
Sbjct: 129 TSMITTIMLESNTDPTAHIGGELDCIG-GNTRIGNSEFFITEACEYYGSFLKFHPFMAVV 187
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
N++ +HVD F D + +KSIF FL + G++V C D + S
Sbjct: 188 LNIELDHVDYFRDLEHIKSIFGEFLALVPNDGYIVACADDENTLS--------------- 232
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFND-WYAESVCPNVQGGSDYILCERGRPLAQISL 374
VVS + + IITYG + + W A+ + N G + + + ++G + +SL
Sbjct: 233 -VVSKKECN---------IITYGLKNKDAMWTAKGITYNSMGCASFDVYKKGEKVGNVSL 282
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHI 434
+PG HNV NSLA IA T S E+IA LS+F G +RF+L G + +
Sbjct: 283 SVPGPHNVNNSLAAIAVAYTC----GCSMENIA---YGLSRFGGSHKRFELKGLVDNIKV 335
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSA 494
DD+AHHP+EV+A L AA+ NK + VFQPHTY+R D F+ + EAD ++++
Sbjct: 336 IDDYAHHPSEVQATLNAAKSSNHNK-IWCVFQPHTYTRTKAFLDRFSKSFGEADNIIITD 394
Query: 495 V 495
+
Sbjct: 395 I 395
>gi|255279944|ref|ZP_05344499.1| UDP-N-acetylmuramate--alanine ligase [Bryantella formatexigens DSM
14469]
gi|255269717|gb|EET62922.1| UDP-N-acetylmuramate--L-alanine ligase [Marvinbryantia
formatexigens DSM 14469]
Length = 459
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 155/429 (36%), Positives = 228/429 (53%), Gaps = 43/429 (10%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DF+ + +HF+GIGG +S LA++ L +GF VSGSD S + L E GA ++ G
Sbjct: 4 IDFR-KPVHVHFIGIGGISMSGLAEVLLDRGFPVSGSDRSESPLTKHLEEQGAIVYYGQR 62
Query: 129 VSNI-QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAV 186
SNI +G D VV ++AI DN E A G+P+ R L +L + Y + IAV
Sbjct: 63 ASNIKEGTD------LVVYTAAIHPDNPEYKAAADAGIPMLTRAELLGQLMKNYPVPIAV 116
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
SG+HGK+TT SM++++L A DD T VG +P G+I GGG F+ EA EY FL
Sbjct: 117 SGTHGKTTTTSMISHLLLADNDDPTISVGGILPVI-HGNIRVGGGDIFLTEACEYTNSFL 175
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 306
P + ++ N+D +H+D F+D + ++ FRRF + + G L+I + Q++
Sbjct: 176 DFFPKIGIILNIDADHLDFFKDINDIRHSFRRFARLLPANGTLII-------NRAIPQVE 228
Query: 307 QDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERG 366
+ T G ++I YG + AE++ N + + L G
Sbjct: 229 EIT------------------DGLACRVIYYGVQEGRGYSAENISYNELACASFDLKRDG 270
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
L L +PG+HNV N++A +A L ++ + + L F G RRF
Sbjct: 271 ELLGHYELCVPGIHNVENAVAALALADLLQIPRQTAQKG-------LKDFTGTDRRFQYK 323
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G + G I DD+AHHPTE+ A L AA+ P++ L VFQPHTY+R L DDFA ALS
Sbjct: 324 GKVGGVTIVDDYAHHPTEITATLTAAKN-CPHETLWCVFQPHTYTRTKALMDDFAKALSL 382
Query: 487 ADQVVVSAV 495
AD+VV++ +
Sbjct: 383 ADKVVLADI 391
>gi|441516164|ref|ZP_20997914.1| UDP-N-acetylmuramate--L-alanine ligase [Gordonia hirsuta DSM 44140
= NBRC 16056]
gi|441456750|dbj|GAC55875.1| UDP-N-acetylmuramate--L-alanine ligase [Gordonia hirsuta DSM 44140
= NBRC 16056]
Length = 489
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 162/438 (36%), Positives = 225/438 (51%), Gaps = 51/438 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H VGIGG+G+S LA++ L +G VSGSD + L GA + IGH S + DG
Sbjct: 15 VHMVGIGGAGMSGLARILLARGGAVSGSDGRDGRGLIALRARGAQVRIGHDPSALDLLDG 74
Query: 138 SRFPNAVVAS-SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
P VV + +AIP DN E++ A+ G+PI R LA+L + Y + ++G+HGK++T
Sbjct: 75 G--PTVVVTTQAAIPDDNPELVEARRRGIPILYRPQVLAQLMDGYRTLLITGTHGKTSTT 132
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM L+ G D + +G + + + +G GK FV EADE DG L P V VVT
Sbjct: 133 SMTVVALQHCGIDPSFAIGGELNESGTNA-HHGSGKVFVAEADESDGSLLQYRPDVVVVT 191
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F EDA +F F IR GG LV+C D A +L + G G
Sbjct: 192 NIEADHLDFFGSEDAYIRVFDEFAGLIRPGGALVVCLDDPGAAALAGRCH---GALAEAG 248
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYI-LCERGR-PLAQISL 374
+ +I+ YG D + P V+ + I L RG +AQ+ L
Sbjct: 249 I---------------QILGYGRGEHRD-----LAPQVRLAGELIGLTARGTGSVAQVRL 288
Query: 375 Q---------------IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGV 419
Q +PG H LN++ + L + +S E L+ + F GV
Sbjct: 289 QPPVTAEPADRAMRVSLPGEHMTLNAIGALLGCLAVA----ESVEPDTVLE-GIDGFGGV 343
Query: 420 SRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKA--LIAVFQPHTYSRLVVLK 477
RRF+ G++ G +YDD+AHHPTEVRAVL AAR ++AVFQPH YSR
Sbjct: 344 HRRFENRGSVAGVRVYDDYAHHPTEVRAVLTAARGVVTETGGRVLAVFQPHLYSRTEEFA 403
Query: 478 DDFANALSEADQVVVSAV 495
D FA ALS AD+VVV+ V
Sbjct: 404 DQFAQALSLADEVVVADV 421
>gi|300741266|ref|ZP_07071287.1| UDP-N-acetylmuramate--alanine ligase [Rothia dentocariosa M567]
gi|300380451|gb|EFJ77013.1| UDP-N-acetylmuramate--alanine ligase [Rothia dentocariosa M567]
Length = 486
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 155/430 (36%), Positives = 223/430 (51%), Gaps = 53/430 (12%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G +HFVGIGG+G+SA+A L LK G VSGSD ++ ++ L EAGA ++ +NI
Sbjct: 21 GRVHFVGIGGAGMSAIATLMLKAGIPVSGSDRAETATIQALREAGARVYTPQDAANIHDI 80
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D VV S+AI +DN E++ A++ + + R LA ++AV+G+HGKSTT
Sbjct: 81 D------TVVISTAIHEDNPELIAARAQNLRVLHRSEALAAAMGSSQVVAVAGTHGKSTT 134
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN-----------FVLEADEYDGC 244
+SM+A +L +G P F G++ G G N FV EADE DG
Sbjct: 135 SSMIAVMLDKLG---------FHPSFAVGTVIAGYGSNARLGATGEGSWFVAEADESDGS 185
Query: 245 FLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 304
F+ P++AVVTN++ +H+D +E + V F RF+ + GG LV C D + AR+L ++
Sbjct: 186 FVRYQPAIAVVTNVEPDHLDFYETPERVYEAFNRFVASMAPGGVLVTCWDDEGARALAER 245
Query: 305 IKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFND--WYAESVCPNVQGGSDYIL 362
+ D G++ V QS++ +I ++G S W E + +G D
Sbjct: 246 AR-DAGIEV---VTYGQSTE--ADLRVSRITSHGSESSATLRWSFECASKHYEGEQD--- 296
Query: 363 CERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRR 422
L++PG+HN LN+ A T L L G Q ++ A L F G RR
Sbjct: 297 ---------AQLRVPGIHNQLNAAAAFITAL-LAG--AQPEDAAAALY----GFGGADRR 340
Query: 423 FDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFAN 482
F L G + G ++DD+AHHPTEV L+ R L VFQPH +SR DFA
Sbjct: 341 FTLRGDVAGIKVFDDYAHHPTEVFRALETGRTVADGHNLYVVFQPHLFSRTQEFAADFAQ 400
Query: 483 ALSEADQVVV 492
ALS+AD+ V
Sbjct: 401 ALSKADRSYV 410
>gi|415715558|ref|ZP_11465981.1| UDP-N-acetylmuramate--alanine ligase [Gardnerella vaginalis 1400E]
gi|388058005|gb|EIK80803.1| UDP-N-acetylmuramate--alanine ligase [Gardnerella vaginalis 1400E]
Length = 503
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 149/430 (34%), Positives = 230/430 (53%), Gaps = 34/430 (7%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G +HF+GIGG+G+S LA++ ++G EVSG D + + L E G N+ IG S S+++
Sbjct: 22 GSVHFIGIGGAGMSVLAEMLHEEGVEVSGCDCQENDHTRRLEELGINVKIGQSASHVKNA 81
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D +V SSAI N EI+ A GV + R L+ L + V+G+HGK+TT
Sbjct: 82 D------ILVYSSAIKPSNPEIIAAYQNGVKLVHRSDILSLLLSAKRGVTVAGAHGKTTT 135
Query: 196 ASMLAYVLKAMGD----DLTAIVGAHVPQFPDGSIFYGG----GKNFVLEADEYDGCFLG 247
+S+LA++L+ G D + +G + Q DG GG G V EADE DG F
Sbjct: 136 SSLLAHILRVCGKGDLADPSYAIGGSI-QAQDGGEIDGGHAGRGNVMVAEADESDGSFEK 194
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
+P +A+VTN++ +H+D + + +S F L G++VIC D AR++LD +
Sbjct: 195 YNPYIAIVTNVEADHLDHYGNAQNYRSAFVEHLSHAL--GYIVICADDDGARAVLDALSD 252
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDW-YAESVCPNVQGGSDYILCERG 366
D+ LK + SN+ + ++ SF + + E GS+ + E
Sbjct: 253 DS-LKKTIVYASNKD--------NVSLLNNRVKSFVKFAFIEHESEKTGSGSESFVIEFN 303
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
++L IPG+HN N+ A I + L + + + S F G SRRFD+
Sbjct: 304 GDFIDVNLIIPGLHNARNACAAIIAAMLLGMSPKDAADG-------ASSFRGASRRFDIR 356
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G + G + DD+AHHPTE+ A+L+AAR+R+PN ++ +FQPH +SR +FA+ALS
Sbjct: 357 GCVNGVTVVDDYAHHPTEIDALLRAARRRYPNASIRVLFQPHLFSRTRSFAHEFASALSL 416
Query: 487 ADQVVVSAVL 496
AD V+V+ +
Sbjct: 417 ADDVIVTGIF 426
>gi|444333731|ref|ZP_21149449.1| UDP-N-acetylmuramate--alanine ligase [Aggregatibacter
actinomycetemcomitans serotype a str. A160]
gi|443551348|gb|ELT59250.1| UDP-N-acetylmuramate--alanine ligase [Aggregatibacter
actinomycetemcomitans serotype a str. A160]
Length = 497
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 146/438 (33%), Positives = 222/438 (50%), Gaps = 61/438 (13%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+ R IHF+GIGG+G+ +A++ L +G+ +SGSD+ S+ + L++AGAN+ IGH
Sbjct: 32 IIPEMRRVKQIHFIGIGGAGMCGIAEILLNEGYSISGSDIAESAVTQRLIKAGANVFIGH 91
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
NI G + VV SSAI DN E++ AK +P+ +R LA+L + IAV+
Sbjct: 92 QAENIVG------ASVVVISSAIHGDNPEVMAAKDARIPVIQRAQMLAELMRFRHGIAVA 145
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEAD 239
G+HGK+TT +M++ + G D P F +G + G N + EAD
Sbjct: 146 GTHGKTTTTAMVSMIYAEAGLD---------PTFVNGGLVKSAGTNAHLGCSRYLIAEAD 196
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCA 298
E D FL L P +++VTN++ +H+D + D D +K + FL + G V+C D +
Sbjct: 197 ESDASFLHLQPMISIVTNIEPDHMDTYHGDFDEMKQTYVNFLHNLPFYGLAVLCADDEVL 256
Query: 299 RSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS 358
L+ + + ++ITYGFS D+ E G
Sbjct: 257 MELVPLVGR-------------------------QVITYGFSENADYRIEDYQQTGFQGH 291
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
++C G + + L +PG HN LN+ A L+ K + ++ A L L+ F G
Sbjct: 292 YTVICPNGERI-DVLLNVPGRHNALNATA------ALVVAKEEGIKNDAILA-ALADFQG 343
Query: 419 VSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
RRFD +G + DD+ HHPTEV +QAARQ + NK ++ +FQPH YSR
Sbjct: 344 AGRRFDQLGQFIRPNGKVMLVDDYGHHPTEVGVTIQAARQGWENKRIVMIFQPHRYSRTR 403
Query: 475 VLKDDFANALSEADQVVV 492
L DDF LS+ D +++
Sbjct: 404 DLFDDFVQVLSQVDVLIM 421
>gi|260899196|ref|ZP_05907591.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio parahaemolyticus
AQ4037]
gi|308107130|gb|EFO44670.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio parahaemolyticus
AQ4037]
Length = 410
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 145/432 (33%), Positives = 220/432 (50%), Gaps = 61/432 (14%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHF+GIGG+G+S +A++ L +G+E++GSDL + E L+ GA + IGH SN++
Sbjct: 21 RVKCIHFIGIGGAGMSGIAEVLLNEGYEITGSDLSENPVTERLVSKGATVFIGHQASNVE 80
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
+ VV S+AI ++N E++ A+ + +PI +R LA+L + IAV+G+HGK+
Sbjct: 81 K------ASVVVVSTAINEENPEVMAARELRIPIVRRAEMLAELMRFRHGIAVAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEADEYDGCF 245
TT +++ + G D P F +G + G N + EADE D F
Sbjct: 135 TTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGSSRILIAEADESDASF 185
Query: 246 LGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 304
L L P V++VTN++ +H+D + D + +K F FL + G ++C D R L+ +
Sbjct: 186 LHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAIVCIDDPVIRELIPR 245
Query: 305 IKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE 364
I + ++ITYGFS D E+ Q G + +
Sbjct: 246 ISR-------------------------QVITYGFSDDADVRIENYHQEGQQGK-FTVVR 279
Query: 365 RGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFD 424
+GR I+L IPG HN LN+ A IA E A LK ++ G RRFD
Sbjct: 280 KGRANLDITLNIPGRHNALNASAAIAVA------TEDDIEDDAILK-AMAGTQGTGRRFD 332
Query: 425 LIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
+G + + DD+ HHPTEV + AAR + +K L+ +FQPH YSR L DDF
Sbjct: 333 HLGEFDTGNGHAMLVDDYGHHPTEVDVTINAARSGWQDKRLVMIFQPHRYSRTRDLYDDF 392
Query: 481 ANALSEADQVVV 492
AN L + D +++
Sbjct: 393 ANVLEQVDVLIM 404
>gi|153839043|ref|ZP_01991710.1| UDP-N-acetylmuramate--alanine ligase [Vibrio parahaemolyticus
AQ3810]
gi|260363428|ref|ZP_05776276.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio parahaemolyticus
K5030]
gi|31076799|sp|Q87SG3.1|MURC_VIBPA RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|149747471|gb|EDM58419.1| UDP-N-acetylmuramate--alanine ligase [Vibrio parahaemolyticus
AQ3810]
gi|308114671|gb|EFO52211.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio parahaemolyticus
K5030]
Length = 485
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 145/432 (33%), Positives = 221/432 (51%), Gaps = 61/432 (14%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHF+GIGG+G+S +A++ L +G+E++GSDL + E L+ GA + IGH SN++
Sbjct: 21 RVKCIHFIGIGGAGMSGIAEVLLNEGYEITGSDLSENPVTERLVSKGATVFIGHQASNVE 80
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
+ VV S+AI ++N E++ A+ + +PI +R LA+L + IAV+G+HGK+
Sbjct: 81 K------ASVVVVSTAINEENPEVMAARELRIPIVRRAEMLAELMRFRHGIAVAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEADEYDGCF 245
TT +++ + G D P F +G + G N + EADE D F
Sbjct: 135 TTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGSSRILIAEADESDASF 185
Query: 246 LGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 304
L L P V++VTN++ +H+D + D + +K F FL + G ++C D R L+ +
Sbjct: 186 LHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAIVCIDDPVIRELIPR 245
Query: 305 IKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE 364
I + ++ITYGFS D E+ Q G + +
Sbjct: 246 ISR-------------------------QVITYGFSDDADVRIENYHQEGQQGK-FTVVR 279
Query: 365 RGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFD 424
+GR I+L IPG HN LN+ A IA E A LK ++ G RRFD
Sbjct: 280 KGRANLDITLNIPGRHNALNASAAIAVA------TEDDIEDDAILK-AMAGTQGTGRRFD 332
Query: 425 LIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
+G + + DD+ HHPTEV ++AAR + +K L+ +FQPH YSR L DDF
Sbjct: 333 HLGEFDTGNGHAMLVDDYGHHPTEVDVTIKAARSGWQDKRLVMIFQPHRYSRTRDLYDDF 392
Query: 481 ANALSEADQVVV 492
AN L + D +++
Sbjct: 393 ANVLEQVDVLIM 404
>gi|336433266|ref|ZP_08613091.1| UDP-N-acetylmuramate-L-alanine ligase [Lachnospiraceae bacterium
2_1_58FAA]
gi|336017020|gb|EGN46794.1| UDP-N-acetylmuramate-L-alanine ligase [Lachnospiraceae bacterium
2_1_58FAA]
Length = 458
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 151/424 (35%), Positives = 229/424 (54%), Gaps = 40/424 (9%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
N+ +HF+GIGG +S LA++ LK+GF VSGSD S E L GA + G SNI
Sbjct: 7 NQPIHVHFIGIGGISMSGLAEILLKEGFTVSGSDSKVSPLTEHLEAKGAQIFYGQKASNI 66
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHG 191
DG + VV ++AI ++N E++ A + +P+ R L +L Y IAVSG+HG
Sbjct: 67 I--DG---IDCVVYTAAIRRENAELMEAVAKKIPMLTRAELLGQLMANYKTPIAVSGTHG 121
Query: 192 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPS 251
K+TT SM+++VL A D T VG + Q G+I G FV EA EY FL P
Sbjct: 122 KTTTTSMISHVLLAGATDPTISVGG-ILQAIGGNIRVGSSGIFVTEACEYTNSFLHFFPK 180
Query: 252 VAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
++++ N++ +H+D F+D + ++ F +F + G L+I G+ +DQ ++
Sbjct: 181 ISIILNIEADHLDFFKDLEDIRHSFHQFAALLPSDGTLIINGE-------IDQYQE---- 229
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQ 371
+G D ++TYG S D+ A+++ + +G + G+
Sbjct: 230 --------------ICEGLDCSVVTYGMSPEFDYSAQNITYDEKGRVAFDFFRNGKMDTH 275
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG 431
I L + G HNV N+L+ IAT L+G S+ ++ L F G RRF+ GTI
Sbjct: 276 IVLSVTGDHNVSNALSAIATA-ELLG------LSMDTIQKGLLSFSGTDRRFEYKGTIDD 328
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
I DD+AHHPTE++A L+AA+ +P++ L VFQPHTY+R +FA ALS AD V+
Sbjct: 329 VTIVDDYAHHPTEIKATLKAAKH-YPHRKLWCVFQPHTYTRTKAFFQEFAEALSHADHVI 387
Query: 492 VSAV 495
++ +
Sbjct: 388 LADI 391
>gi|225023733|ref|ZP_03712925.1| hypothetical protein EIKCOROL_00597 [Eikenella corrodens ATCC
23834]
gi|224943615|gb|EEG24824.1| hypothetical protein EIKCOROL_00597 [Eikenella corrodens ATCC
23834]
Length = 486
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 151/437 (34%), Positives = 220/437 (50%), Gaps = 47/437 (10%)
Query: 66 ECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHI 125
E ++ K R IHFVGIGGSG+ LA++ K+ F+VSGSD S+ L + G +
Sbjct: 17 EAVITMKQRVKRIHFVGIGGSGMCGLAEVLYKE-FDVSGSDQAQSAVTRQLADMGIKVFH 75
Query: 126 GHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIA 185
GH+ +I+G D VV S+AI DN E+L A+ G+P+ R LA++ IA
Sbjct: 76 GHAAEHIEGVD------VVVTSTAIKPDNPEVLAAREAGIPVIPRAMMLAEIMRFGQGIA 129
Query: 186 VSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCF 245
++G+HGK+TT S+ A +L A G D T ++G + + GGG+ V EADE D F
Sbjct: 130 IAGTHGKTTTTSLTASILTAAGLDPTFVIGGKLTAAGTNAKL-GGGQYIVAEADESDASF 188
Query: 246 LGLSPSVAVVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 304
L L+P + VVTN+D +H+D ++ D + F F+ ++ G +C DS+ R++L +
Sbjct: 189 LYLTPVITVVTNIDTDHMDTYDHSVDKLHQAFVEFVHRMPFYGKAFLCIDSEHVRAILPE 248
Query: 305 IKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESV-CPNVQGGSDYILC 363
I++ TYG D YA++V Q L
Sbjct: 249 IQK-------------------------PFATYGLDETADIYADNVHSEGAQMCFTVHLN 283
Query: 364 ERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRF 423
+R ++ L PG HNVLN+LA I L D + ++ L+ F GV RRF
Sbjct: 284 KRSIAPFEVRLNAPGRHNVLNALAAIGVALECGAD-------VEAIQRGLAGFGGVGRRF 336
Query: 424 DLIGTIY-----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKD 478
G I + DD+ HHP E+ A L AAR +P L+ FQPH Y+R L +
Sbjct: 337 QSYGEIKLPQGGSALVIDDYGHHPVEMAATLSAARGAYPESRLVLAFQPHRYTRTRDLFE 396
Query: 479 DFANALSEADQVVVSAV 495
DF L+ AD VV++ V
Sbjct: 397 DFVRVLNTADAVVLTDV 413
>gi|451975657|ref|ZP_21926841.1| UDP-N-acetylmuramate--alanine ligase [Vibrio alginolyticus E0666]
gi|451930400|gb|EMD78110.1| UDP-N-acetylmuramate--alanine ligase [Vibrio alginolyticus E0666]
Length = 485
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 145/439 (33%), Positives = 223/439 (50%), Gaps = 61/439 (13%)
Query: 67 CIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG 126
+V R IHF+GIGG+G+S +A++ L +G++++GSDL + E L+ GA + IG
Sbjct: 14 AMVPEMRRVKSIHFIGIGGAGMSGIAEVLLNEGYQITGSDLSENPVTERLVSKGATVFIG 73
Query: 127 HSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAV 186
H SN++ + VV S+AI ++N E++ A+ + +PI +R LA+L + IAV
Sbjct: 74 HQASNVEK------ASVVVVSTAINEENPEVMAARELRIPIVRRAEMLAELMRFRHGIAV 127
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEA 238
+G+HGK+TT +++ + G D P F +G + G N + EA
Sbjct: 128 AGTHGKTTTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGSSRILIAEA 178
Query: 239 DEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQC 297
DE D FL L P V++VTN++ +H+D + D + +K F FL + G ++C D
Sbjct: 179 DESDASFLHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAIVCIDDPV 238
Query: 298 ARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG 357
R L+ +I + ++ITYGFS+ D E+ Q G
Sbjct: 239 VRELIPRISR-------------------------QVITYGFSADADVRIENYRQEGQQG 273
Query: 358 SDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFM 417
+ + +GR I+L IPG HN LN+ A IA E A LK ++
Sbjct: 274 K-FTVVRKGRANLDITLNIPGRHNALNASAAIAVA------TEDDIEDDAILK-AMAGTQ 325
Query: 418 GVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRL 473
G RRFD +G + + DD+ HHPTEV + AAR + +K L+ +FQPH YSR
Sbjct: 326 GTGRRFDHLGEFDTGNGHAMLVDDYGHHPTEVDVTINAARSGWQDKRLVMIFQPHRYSRT 385
Query: 474 VVLKDDFANALSEADQVVV 492
L DDFAN L + D +++
Sbjct: 386 RDLYDDFANVLEQVDVLIM 404
>gi|269967384|ref|ZP_06181444.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio alginolyticus 40B]
gi|269827972|gb|EEZ82246.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio alginolyticus 40B]
Length = 485
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 145/439 (33%), Positives = 222/439 (50%), Gaps = 61/439 (13%)
Query: 67 CIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG 126
+V R IHF+GIGG+G+S +A++ L +G++++GSDL ++ E L+ GA + IG
Sbjct: 14 AMVPEMRRVKSIHFIGIGGAGMSGIAEVLLNEGYQITGSDLSENAVTERLVSKGATVFIG 73
Query: 127 HSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAV 186
H SN++ + VV S+AI ++N E++ A+ + +PI +R LA+L + IAV
Sbjct: 74 HQASNVEK------ASVVVVSTAINEENPEVMAARELRIPIVRRAEMLAELMRFRHGIAV 127
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEA 238
+G+HGK+TT +++ + G D P F +G + G N + EA
Sbjct: 128 AGTHGKTTTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGSSRILIAEA 178
Query: 239 DEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQC 297
DE D FL L P V++VTN++ +H+D + D + +K F FL + G ++C D
Sbjct: 179 DESDASFLHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAIVCIDDPV 238
Query: 298 ARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG 357
R L+ +I + ++ITYGFS D E Q G
Sbjct: 239 VRELIPRISR-------------------------QVITYGFSEDADVRIEDYRQEGQQG 273
Query: 358 SDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFM 417
+ + +GR I+L IPG HN LN+ A IA E A LK ++
Sbjct: 274 K-FTVVRKGRANLDITLNIPGRHNALNASAAIAVA------TEDDIEDDAILK-AMAGTQ 325
Query: 418 GVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRL 473
G RRFD +G + + DD+ HHPTEV + AAR + +K L+ +FQPH YSR
Sbjct: 326 GTGRRFDHLGEFDTGNGHAMLVDDYGHHPTEVDVTINAARSGWQDKRLVMIFQPHRYSRT 385
Query: 474 VVLKDDFANALSEADQVVV 492
L DDFAN L + D +++
Sbjct: 386 RDLYDDFANVLEQVDVLIM 404
>gi|225388505|ref|ZP_03758229.1| hypothetical protein CLOSTASPAR_02241 [Clostridium asparagiforme
DSM 15981]
gi|225045436|gb|EEG55682.1| hypothetical protein CLOSTASPAR_02241 [Clostridium asparagiforme
DSM 15981]
Length = 462
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 148/429 (34%), Positives = 228/429 (53%), Gaps = 41/429 (9%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DF R +HF+GIGG +S LA++ L +GF VSGSD + + L GA ++ G
Sbjct: 5 IDFSKRS-HVHFIGIGGISMSGLAEILLDEGFTVSGSDSHETELTDRLEAKGARVYYGQR 63
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVS 187
NI+ G + AVV ++AI +DN E + A+ G+P+ R +L ++ Y IA+S
Sbjct: 64 AGNIEQEPGIQ---AVVYTAAIHEDNPEFIAAREKGLPMLSRAEFLGEMMRNYKQSIAIS 120
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT SM+A +L A D T VG + G+I G FV EA EY FL
Sbjct: 121 GTHGKTTTTSMVAEMLLAGDMDPTVSVGGILKDI-GGNIRVGSPDLFVTEACEYTNSFLS 179
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P++ VV N++ +H+D F+D + ++ FR F +++ G LVI + + + D +K
Sbjct: 180 FYPTLEVVLNIEADHLDFFKDLEDIRHSFRLFAQKLPQDGLLVINSGIENLQQITDGLK- 238
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR 367
+I+T+G S + + A+++ + Y L +G+
Sbjct: 239 ------------------------CRIVTFGSSPDSHYTAQNITYDEFARPSYDLIVQGK 274
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
+ ++SL + G HNV NSLA IA V+ L +G + L F G RRF+
Sbjct: 275 LVNRVSLGVTGEHNVYNSLAAIAVVMELGVG--------FEAIMAGLKNFSGTDRRFEKK 326
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G I G I DD+AHHP E++A L AA+ +P++ L VFQPHTY+R D FA L+
Sbjct: 327 GEIGGVTIIDDYAHHPQEIKATLAAAKN-YPHRKLWCVFQPHTYTRTKAFLDQFAETLAA 385
Query: 487 ADQVVVSAV 495
AD+V+++ +
Sbjct: 386 ADEVILADI 394
>gi|429733331|ref|ZP_19267578.1| UDP-N-acetylmuramate--L-alanine ligase [Aggregatibacter
actinomycetemcomitans Y4]
gi|429155063|gb|EKX97764.1| UDP-N-acetylmuramate--L-alanine ligase [Aggregatibacter
actinomycetemcomitans Y4]
Length = 491
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 146/438 (33%), Positives = 222/438 (50%), Gaps = 61/438 (13%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+ R IHF+GIGG+G+ +A++ L +G+ +SGSD+ S+ + L++AGAN+ IGH
Sbjct: 26 IIPEMRRVKQIHFIGIGGAGMCGIAEILLNEGYSISGSDIAESAVTQRLIKAGANVFIGH 85
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
NI G + VV SSAI DN E++ AK +P+ +R LA+L + IAV+
Sbjct: 86 QAENIVG------ASVVVISSAIHGDNPEVMAAKDARIPVIQRAQMLAELMRFRHGIAVA 139
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEAD 239
G+HGK+TT +M++ + G D P F +G + G N + EAD
Sbjct: 140 GTHGKTTTTAMVSMIYAEAGLD---------PTFVNGGLVKSAGTNAHLGCSRYLIAEAD 190
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCA 298
E D FL L P +++VTN++ +H+D + D D +K + FL + G V+C D +
Sbjct: 191 ESDASFLHLQPMISIVTNIEPDHMDTYHGDFDEMKQTYVNFLHNLPFYGLAVLCADDEVL 250
Query: 299 RSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS 358
L+ + + ++ITYGFS D+ E G
Sbjct: 251 MELVPLVGR-------------------------QVITYGFSENADYRIEDYQQTGFQGH 285
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
++C G + + L +PG HN LN+ A L+ K + ++ A L L+ F G
Sbjct: 286 YTVICPNGERI-DVLLNVPGRHNALNATA------ALVVAKEEGIKNDAILA-ALADFQG 337
Query: 419 VSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
RRFD +G + DD+ HHPTEV +QAARQ + NK ++ +FQPH YSR
Sbjct: 338 AGRRFDQLGQFIRPNGKVMLVDDYGHHPTEVGVTIQAARQGWENKRIVMIFQPHRYSRTR 397
Query: 475 VLKDDFANALSEADQVVV 492
L DDF LS+ D +++
Sbjct: 398 DLFDDFVQVLSQVDVLIM 415
>gi|91228515|ref|ZP_01262437.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio alginolyticus 12G01]
gi|91187949|gb|EAS74259.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio alginolyticus 12G01]
Length = 485
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 145/439 (33%), Positives = 222/439 (50%), Gaps = 61/439 (13%)
Query: 67 CIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG 126
+V R IHF+GIGG+G+S +A++ L +G++++GSDL ++ E L+ GA + IG
Sbjct: 14 AMVPEMRRVKSIHFIGIGGAGMSGIAEVLLNEGYQITGSDLSENAVTERLVSKGATVFIG 73
Query: 127 HSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAV 186
H SN++ + VV S+AI ++N E++ A+ + +PI +R LA+L + IAV
Sbjct: 74 HQASNVEK------ASVVVVSTAINEENPEVMAARELRIPIVRRAEMLAELMRFRHGIAV 127
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEA 238
+G+HGK+TT +++ + G D P F +G + G N + EA
Sbjct: 128 AGTHGKTTTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGSSRILIAEA 178
Query: 239 DEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQC 297
DE D FL L P V++VTN++ +H+D + D + +K F FL + G ++C D
Sbjct: 179 DESDASFLHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAIVCIDDPV 238
Query: 298 ARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG 357
R L+ +I + ++ITYGFS D E Q G
Sbjct: 239 VRELIPRISR-------------------------QVITYGFSEDADVRIEDYRQEGQQG 273
Query: 358 SDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFM 417
+ + +GR I+L IPG HN LN+ A IA E A LK ++
Sbjct: 274 K-FTVVRKGRANLDITLNIPGRHNALNASAAIAVA------TEDDIEDDAILK-AMAGTQ 325
Query: 418 GVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRL 473
G RRFD +G + + DD+ HHPTEV + AAR + +K L+ +FQPH YSR
Sbjct: 326 GTGRRFDHLGEFDTGNGHAMLVDDYGHHPTEVDVTINAARSGWQDKRLVMIFQPHRYSRT 385
Query: 474 VVLKDDFANALSEADQVVV 492
L DDFAN L + D +++
Sbjct: 386 RDLYDDFANVLEQVDVLIM 404
>gi|150014970|ref|YP_001307224.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium beijerinckii
NCIMB 8052]
gi|189028985|sp|A6LPI8.1|MURC_CLOB8 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|149901435|gb|ABR32268.1| UDP-N-acetylmuramate--alanine ligase [Clostridium beijerinckii
NCIMB 8052]
Length = 459
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 141/423 (33%), Positives = 222/423 (52%), Gaps = 43/423 (10%)
Query: 72 KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSN 131
K++ IHF+GIGG +S LA + L G+ VSGSD S+ ++ L +GA ++IGH N
Sbjct: 7 KDKDKKIHFIGIGGISMSGLAAVLLNSGYSVSGSDFKDSAIIDKLRSSGAEIYIGHRREN 66
Query: 132 IQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAVSGS 189
I D VV ++AIP DN E+L AK + + R +L ++ + KY+ +A+SG+
Sbjct: 67 INNVD------LVVYTAAIPSDNPELLEAKEKNIALMDRAEFLGQIMKGHKYS-VAISGT 119
Query: 190 HGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLS 249
HGK+T SML+++ A D T +VG + G+ G + F+ EA EY FL
Sbjct: 120 HGKTTCTSMLSHITLADNLDPTILVGGELDAIG-GNFRIGNSEYFLTEACEYKRSFLKFP 178
Query: 250 PSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
P V ++ N+D +H+D ++D D + F +F + I G+LV D Q +L + +T
Sbjct: 179 PYVGIILNIDSDHLDYYKDIDEIADTFLQFSRLIPEDGYLVGYADDQRVNEILSETNCNT 238
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPL 369
++YGFS + A+++ N G + + + + G L
Sbjct: 239 -------------------------LSYGFSDNANLTAKNIHFNTNGCATFDVYKDGNNL 273
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
I+L +PG HN+LN+LA I L + S C+ LS G +RF+ G +
Sbjct: 274 FNITLNVPGKHNILNALASICVSLIF-------NISNDCIIEGLSNCKGAHKRFEYKGKL 326
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
G + DD+AHHPTE++A L A+Q NK +FQPHTY+R L D+F ++AD+
Sbjct: 327 NGVTVIDDYAHHPTEIKATLSTAKQMNHNKTY-CIFQPHTYTRTKALFDEFTECFNDADE 385
Query: 490 VVV 492
+++
Sbjct: 386 LIL 388
>gi|417321320|ref|ZP_12107860.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio parahaemolyticus
10329]
gi|433656754|ref|YP_007274133.1| UDP-N-acetylmuramate--alanine ligase [Vibrio parahaemolyticus
BB22OP]
gi|328472000|gb|EGF42877.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio parahaemolyticus
10329]
gi|432507442|gb|AGB08959.1| UDP-N-acetylmuramate--alanine ligase [Vibrio parahaemolyticus
BB22OP]
Length = 485
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 145/432 (33%), Positives = 220/432 (50%), Gaps = 61/432 (14%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHF+GIGG+G+S +A++ L +G+E++GSDL + E L+ GA + IGH SN++
Sbjct: 21 RVKCIHFIGIGGAGMSGIAEVLLNEGYEITGSDLSENPVTERLVSKGATVFIGHQASNVE 80
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
+ VV S+AI ++N E++ A+ + +PI +R LA+L + IAV+G+HGK+
Sbjct: 81 K------ASVVVVSTAINEENPEVMAARELRIPIVRRAEMLAELMRFRHGIAVAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEADEYDGCF 245
TT +++ + G D P F +G + G N + EADE D F
Sbjct: 135 TTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGSSRILIAEADESDASF 185
Query: 246 LGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 304
L L P V++VTN++ +H+D + D + +K F FL + G ++C D R L+ +
Sbjct: 186 LHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAIVCIDDPVIRELIPR 245
Query: 305 IKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE 364
I + ++ITYGFS D E+ Q G + +
Sbjct: 246 ISR-------------------------QVITYGFSDDADVRIENYHQEGQQGK-FTVVR 279
Query: 365 RGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFD 424
+GR I+L IPG HN LN+ A IA E A LK ++ G RRFD
Sbjct: 280 KGRANLDITLNIPGRHNALNASAAIAVA------TEDDIEDDAILK-AMAGTQGTGRRFD 332
Query: 425 LIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
+G + + DD+ HHPTEV + AAR + +K L+ +FQPH YSR L DDF
Sbjct: 333 HLGEFDTGNGHAMLVDDYGHHPTEVDVTINAARSGWQDKRLVMIFQPHRYSRTRDLYDDF 392
Query: 481 ANALSEADQVVV 492
AN L + D +++
Sbjct: 393 ANVLEQVDVLIM 404
>gi|311113341|ref|YP_003984563.1| UDP-N-acetylmuramate--L-alanine ligase [Rothia dentocariosa ATCC
17931]
gi|310944835|gb|ADP41129.1| UDP-N-acetylmuramate--L-alanine ligase [Rothia dentocariosa ATCC
17931]
Length = 494
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 155/430 (36%), Positives = 223/430 (51%), Gaps = 53/430 (12%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G +HFVGIGG+G+SA+A L LK G VSGSD ++ ++ L EAGA ++ +NI
Sbjct: 29 GRVHFVGIGGAGMSAIATLMLKAGIPVSGSDRAETATIQALREAGARVYTPQDAANIHDI 88
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D VV S+AI +DN E++ A++ + + R LA ++AV+G+HGKSTT
Sbjct: 89 D------TVVISTAIHEDNPELIAARAQNLRVLHRSEALAAAMGASQVVAVAGTHGKSTT 142
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN-----------FVLEADEYDGC 244
+SM+A +L +G P F G++ G G N FV EADE DG
Sbjct: 143 SSMIAVMLDKLG---------FHPSFAVGTVIAGYGSNARLGATGEGSWFVAEADESDGS 193
Query: 245 FLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 304
F+ P++AVVTN++ +H+D +E + V F RF+ + GG LV C D + AR+L ++
Sbjct: 194 FVRYQPAIAVVTNVEPDHLDFYETPERVYEAFNRFVASMVPGGVLVTCWDDEGARALAER 253
Query: 305 IKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFND--WYAESVCPNVQGGSDYIL 362
+ D G++ V QS++ +I ++G S W E + +G D
Sbjct: 254 AR-DAGIEV---VTYGQSTE--ADLRVSRITSHGSESSATLRWSFECASKHYEGEQD--- 304
Query: 363 CERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRR 422
L++PG+HN LN+ A T L L G Q ++ A L F G RR
Sbjct: 305 ---------AQLRVPGIHNQLNAAAAFITAL-LAG--AQPEDAAAALY----GFGGADRR 348
Query: 423 FDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFAN 482
F L G + G ++DD+AHHPTEV L+ R L VFQPH +SR DFA
Sbjct: 349 FTLRGDVAGIKVFDDYAHHPTEVFRALETGRTVADGHNLYVVFQPHLFSRTQEFAADFAQ 408
Query: 483 ALSEADQVVV 492
ALS+AD+ V
Sbjct: 409 ALSKADRSYV 418
>gi|172040884|ref|YP_001800598.1| UDP-N-acetylmuramate--L-alanine ligase [Corynebacterium urealyticum
DSM 7109]
gi|448823856|ref|YP_007417022.1| UDP-N-acetylmuramate--alanine ligase [Corynebacterium urealyticum
DSM 7111]
gi|229486485|sp|B1VHC3.1|MURC_CORU7 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|171852188|emb|CAQ05164.1| UDP-N-acetylmuramate--alanine ligase [Corynebacterium urealyticum
DSM 7109]
gi|448277353|gb|AGE36777.1| UDP-N-acetylmuramate--alanine ligase [Corynebacterium urealyticum
DSM 7111]
Length = 487
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 152/425 (35%), Positives = 224/425 (52%), Gaps = 37/425 (8%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
H VGIGG+G+S +A++ L +G+ V+GSD+ S + L AGA + IGH +N+ G G+
Sbjct: 14 HMVGIGGAGMSGIARILLARGYSVTGSDMKDSRSVLALRAAGAEVAIGHDAANVTG--GA 71
Query: 139 RFPNAVVAS-SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
P VV S +AIP+DN E+ A+ G+PI +R LA+L ++G+HGK++T S
Sbjct: 72 ELPTVVVTSFAAIPKDNPELTAAREAGIPIVRRSDVLAELMSDRRAFLLAGTHGKTSTTS 131
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M ++A G D + +G + + + +G G+ F+ EADE DG FL SP VAV+TN
Sbjct: 132 MAVVGVQAAGLDPSFAIGGQLNRAGTNA-HHGTGEIFIAEADESDGSFLSYSPEVAVITN 190
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVIC----GDSQCARSLLDQIKQDTGLKY 313
++ +H+D + E+A +IF F ++ GG+LV C G + A + T L Y
Sbjct: 191 IEPDHLDYYGTEEAYVAIFDEFATKVTPGGYLVCCLDDPGAAALAARVRAAGTAPTVLGY 250
Query: 314 SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYI---LCERGRPLA 370
++Q D+ II E + P+ +G + + L +
Sbjct: 251 GSRAAADQHPDIPAA----AII------------EEMIPDARGTAAKVRFNLPGQEERYE 294
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
I + IPG H LN +A I L D + +A F GV RRF+ G
Sbjct: 295 DIRVAIPGAHMTLNGVAAITGGALLGADLEKVIAGVA-------DFDGVRRRFEYHGEAG 347
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNK---ALIAVFQPHTYSRLVVLKDDFANALSEA 487
G +YDD+AHHPTEV AVL AA++ +IAVFQPH YSR + +FA ALS A
Sbjct: 348 GVRVYDDYAHHPTEVTAVLTAAKELVEATDAGRIIAVFQPHLYSRTMNFASEFARALSLA 407
Query: 488 DQVVV 492
D+VV+
Sbjct: 408 DEVVL 412
>gi|387121184|ref|YP_006287067.1| UDP-N-acetylmuramate--L-alanine ligase [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|415756276|ref|ZP_11481014.1| UDP-N-acetylmuramate--alanine ligase [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|416038511|ref|ZP_11574162.1| UDP-N-acetylmuramate--alanine ligase [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|416044364|ref|ZP_11574991.1| UDP-N-acetylmuramate--alanine ligase [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|416055530|ref|ZP_11579584.1| UDP-N-acetylmuramate--alanine ligase [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|416071307|ref|ZP_11583772.1| UDP-N-acetylmuramate--alanine ligase [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|347994969|gb|EGY36199.1| UDP-N-acetylmuramate--alanine ligase [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|347996249|gb|EGY37352.1| UDP-N-acetylmuramate--alanine ligase [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|347998649|gb|EGY39560.1| UDP-N-acetylmuramate--alanine ligase [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|348002938|gb|EGY43600.1| UDP-N-acetylmuramate--alanine ligase [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|348655847|gb|EGY71278.1| UDP-N-acetylmuramate--alanine ligase [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|385875676|gb|AFI87235.1| UDP-N-acetylmuramate--alanine ligase [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 476
Score = 231 bits (589), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 146/438 (33%), Positives = 222/438 (50%), Gaps = 61/438 (13%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+ R IHF+GIGG+G+ +A++ L +G+ +SGSD+ S+ + L++AGAN+ IGH
Sbjct: 11 IIPEMRRVKQIHFIGIGGAGMCGIAEILLNEGYSISGSDIAESAVTQRLIKAGANVFIGH 70
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
NI G + VV SSAI DN E++ AK +P+ +R LA+L + IAV+
Sbjct: 71 QAENIVG------ASVVVISSAIHGDNPEVMAAKDARIPVIQRAQMLAELMRFRHGIAVA 124
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEAD 239
G+HGK+TT +M++ + G D P F +G + G N + EAD
Sbjct: 125 GTHGKTTTTAMVSMIYAEAGLD---------PTFVNGGLVKSAGTNAHLGCSRYLIAEAD 175
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCA 298
E D FL L P +++VTN++ +H+D + D D +K + FL + G V+C D +
Sbjct: 176 ESDASFLHLQPMISIVTNIEPDHMDTYHGDFDEMKQTYVNFLHNLPFYGLAVLCADDEVL 235
Query: 299 RSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS 358
L+ + + ++ITYGFS D+ E G
Sbjct: 236 MELVPLVGR-------------------------QVITYGFSENADYRIEDYQQTGFQGH 270
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
++C G + + L +PG HN LN+ A L+ K + ++ A L L+ F G
Sbjct: 271 YTVICPNGERI-DVLLNVPGRHNALNATA------ALVVAKEEGIKNDAILA-ALADFQG 322
Query: 419 VSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
RRFD +G + DD+ HHPTEV +QAARQ + NK ++ +FQPH YSR
Sbjct: 323 AGRRFDQLGQFIRPNGKVMLVDDYGHHPTEVGVTIQAARQGWENKRIVMIFQPHRYSRTR 382
Query: 475 VLKDDFANALSEADQVVV 492
L DDF LS+ D +++
Sbjct: 383 DLFDDFVQVLSQVDVLIM 400
>gi|154503754|ref|ZP_02040814.1| hypothetical protein RUMGNA_01578 [Ruminococcus gnavus ATCC 29149]
gi|153795854|gb|EDN78274.1| UDP-N-acetylmuramate--L-alanine ligase [Ruminococcus gnavus ATCC
29149]
Length = 487
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 150/419 (35%), Positives = 227/419 (54%), Gaps = 40/419 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG +S LA++ LK+GF VSGSD S E L GA + G SNI DG
Sbjct: 41 VHFIGIGGISMSGLAEILLKEGFTVSGSDSKVSPLTEHLEAKGAQIFYGQKASNII--DG 98
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTTA 196
+ VV ++AI ++N E++ A + +P+ R L +L Y IAVSG+HGK+TT
Sbjct: 99 ---IDCVVYTAAIRRENAELMEAVAKKIPMLTRAELLGQLMANYKTPIAVSGTHGKTTTT 155
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM+++VL A D T VG + Q G+I G FV EA EY FL P ++++
Sbjct: 156 SMISHVLLAGDTDPTISVGG-ILQAIGGNIRVGSSGIFVTEACEYTNSFLHFFPKISIIL 214
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F+D + ++ F +F + G L+I G+ +DQ ++
Sbjct: 215 NIEADHLDFFKDLEDIRHSFHQFAALLPSDGTLIINGE-------IDQYQE--------- 258
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+G D ++TYG S D+ A+++ + +G + G+ I L +
Sbjct: 259 ---------ICEGLDCSVVTYGMSPEFDYSAQNITYDEKGRVAFDFFRNGKLDTHIVLSV 309
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
G HNV N+L+ IAT L+G S+ ++ L F G RRF+ GTI I D
Sbjct: 310 TGDHNVSNALSAIATA-ELLG------LSMDTIQKGLLSFSGTDRRFEYKGTIDDVTIVD 362
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHPTE++A L+AA+ +P++ L VFQPHTY+R +FA ALS AD V+++ +
Sbjct: 363 DYAHHPTEIKATLKAAKH-YPHRKLWCVFQPHTYTRTKAFFQEFAEALSHADHVILADI 420
>gi|254230417|ref|ZP_04923797.1| UDP-N-acetylmuramate--alanine ligase [Vibrio sp. Ex25]
gi|151937050|gb|EDN55928.1| UDP-N-acetylmuramate--alanine ligase [Vibrio sp. Ex25]
Length = 484
Score = 231 bits (588), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 145/439 (33%), Positives = 222/439 (50%), Gaps = 61/439 (13%)
Query: 67 CIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG 126
+V R IHF+GIGG+G+S +A++ L +G++++GSDL + E L+ GA + IG
Sbjct: 14 AMVPEMRRVKSIHFIGIGGAGMSGIAEVLLNEGYQITGSDLSENPVTERLVSKGATVFIG 73
Query: 127 HSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAV 186
H SN++ + VV S+AI ++N E++ A+ + +PI +R LA+L + IAV
Sbjct: 74 HQASNVEK------ASVVVVSTAINEENPEVIAARELRIPIVRRAEMLAELMRFRHGIAV 127
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEA 238
+G+HGK+TT +++ + G D P F +G + G N + EA
Sbjct: 128 AGTHGKTTTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGSSRILIAEA 178
Query: 239 DEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQC 297
DE D FL L P V++VTN++ +H+D + D + +K F FL + G ++C D
Sbjct: 179 DESDASFLHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAIVCIDDPV 238
Query: 298 ARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG 357
R L+ +I + ++ITYGFS D E+ Q G
Sbjct: 239 VRELIPRISR-------------------------QVITYGFSEDADVRIENYRQEGQQG 273
Query: 358 SDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFM 417
+ + +GR I+L IPG HN LN+ A IA E A LK ++
Sbjct: 274 K-FTVVRKGRANLDITLNIPGRHNALNASAAIAVA------TEDDIEDDAILK-AMAGTQ 325
Query: 418 GVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRL 473
G RRFD +G + + DD+ HHPTEV + AAR + +K L+ +FQPH YSR
Sbjct: 326 GTGRRFDHLGEFDTGNGHAMLVDDYGHHPTEVDVTINAARSGWQDKRLVMIFQPHRYSRT 385
Query: 474 VVLKDDFANALSEADQVVV 492
L DDFAN L + D +++
Sbjct: 386 RDLYDDFANVLEQVDVLIM 404
>gi|262395258|ref|YP_003287112.1| UDP-N-acetylmuramate--alanine ligase [Vibrio sp. Ex25]
gi|262338852|gb|ACY52647.1| UDP-N-acetylmuramate--alanine ligase [Vibrio sp. Ex25]
Length = 485
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 145/439 (33%), Positives = 222/439 (50%), Gaps = 61/439 (13%)
Query: 67 CIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG 126
+V R IHF+GIGG+G+S +A++ L +G++++GSDL + E L+ GA + IG
Sbjct: 14 AMVPEMRRVKSIHFIGIGGAGMSGIAEVLLNEGYQITGSDLSENPVTERLVSKGATVFIG 73
Query: 127 HSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAV 186
H SN++ + VV S+AI ++N E++ A+ + +PI +R LA+L + IAV
Sbjct: 74 HQASNVEK------ASVVVVSTAINEENPEVIAARELRIPIVRRAEMLAELMRFRHGIAV 127
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEA 238
+G+HGK+TT +++ + G D P F +G + G N + EA
Sbjct: 128 AGTHGKTTTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGSSRILIAEA 178
Query: 239 DEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQC 297
DE D FL L P V++VTN++ +H+D + D + +K F FL + G ++C D
Sbjct: 179 DESDASFLHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAIVCIDDPV 238
Query: 298 ARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG 357
R L+ +I + ++ITYGFS D E+ Q G
Sbjct: 239 VRELIPRISR-------------------------QVITYGFSEDADVRIENYRQEGQQG 273
Query: 358 SDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFM 417
+ + +GR I+L IPG HN LN+ A IA E A LK ++
Sbjct: 274 K-FTVVRKGRANLDITLNIPGRHNALNASAAIAVA------TEDDIEDDAILK-AMAGTQ 325
Query: 418 GVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRL 473
G RRFD +G + + DD+ HHPTEV + AAR + +K L+ +FQPH YSR
Sbjct: 326 GTGRRFDHLGEFDTGNGHAMLVDDYGHHPTEVDVTINAARSGWQDKRLVMIFQPHRYSRT 385
Query: 474 VVLKDDFANALSEADQVVV 492
L DDFAN L + D +++
Sbjct: 386 RDLYDDFANVLEQVDVLIM 404
>gi|244539204|dbj|BAH83247.1| UDP-N-acetylmuramate--L-alanine ligase [Candidatus Ishikawaella
capsulata Mpkobe]
Length = 486
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 139/430 (32%), Positives = 229/430 (53%), Gaps = 55/430 (12%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+S LA + +G+ +SGSDLV + ++ L+ GA ++ H NI
Sbjct: 22 IHFVGIGGIGMSGLAIVLANEGYRISGSDLVSNKIIDHLITLGAKIYFNHHAENINN--- 78
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
N +V SSA+P++N E++ A+ +PI R LA++ IA+SG+HGK+TT S
Sbjct: 79 ---ANLIVVSSAVPKNNPELIAAQKYYIPIISRAEMLAEIMRFRYGIAISGTHGKTTTTS 135
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+ + + G + T I G + + + ++ G F+ EADE D FL L P V++VTN
Sbjct: 136 MIVSIYEDAGLNPTFISGGFIKRLGNANL--GNSAYFITEADESDASFLYLQPIVSIVTN 193
Query: 258 LDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
++ +H+D ++ + +K+ F +F+ + + G +++C D + R L+ IK+
Sbjct: 194 IEADHMDTYKGNFEELKNSFIKFIHNLPLYGRVIMCLDDRVIRDLISSIKR--------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS--DYILCERGRPLAQISL 374
K+ITYGF++ D Y + Q G ++ L + + + ++L
Sbjct: 245 ----------------KVITYGFTNDADIY---ITEYKQEGRKVNFCLIVKDQDIMHVTL 285
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG-----TI 429
PG HN LN+ A IAT L D + + L F G++RRFD++G +I
Sbjct: 286 NQPGYHNALNATAAIATALEEGIDNK-------IILRSLENFQGIARRFDILGEFKTNSI 338
Query: 430 YGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
G + +D+ HHPTE+ A ++A R+ +P K LI +FQPH Y+R L +F N L
Sbjct: 339 NGIDGSVILIEDYGHHPTEIEATIKAVREGWPEKKLIMIFQPHRYTRTRDLFSEFVNVLE 398
Query: 486 EADQVVVSAV 495
+ + +++ V
Sbjct: 399 KVNILLILEV 408
>gi|416893078|ref|ZP_11924364.1| UDP-N-acetylmuramate--L-alanine ligase [Aggregatibacter aphrophilus
ATCC 33389]
gi|347814106|gb|EGY30756.1| UDP-N-acetylmuramate--L-alanine ligase [Aggregatibacter aphrophilus
ATCC 33389]
Length = 476
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 148/438 (33%), Positives = 223/438 (50%), Gaps = 61/438 (13%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+ R IHF+GIGG+G+ +A++ L +G+ +SGSD+ S+ + L +AGA + IGH
Sbjct: 11 IIPEMRRVKQIHFIGIGGAGMCGIAEILLNEGYCISGSDIAESAVTQRLTKAGAKVFIGH 70
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
S NI G + VV SSAI DN E++ AK +P+ +R LA+L + IAV+
Sbjct: 71 SAENIIG------ASVVVISSAIHGDNPEVMAAKKARIPVIQRAQMLAELMRFRHGIAVA 124
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEAD 239
G+HGK+TT +M++ + G D P F +G + G N + EAD
Sbjct: 125 GTHGKTTTTAMVSMIYAQAGLD---------PTFVNGGLVKSAGTNAHLGCSRYLIAEAD 175
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCA 298
E D FL L P +++VTN++ +H+D + D D +K + FL + G V+C D
Sbjct: 176 ESDASFLHLQPMISIVTNIEPDHMDTYHGDFDEMKQTYVNFLHNLPFYGLAVLCADDADL 235
Query: 299 RSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS 358
SL+ Q+ + ++ITYGFS D+ E G
Sbjct: 236 MSLVPQVGR-------------------------QVITYGFSENADYRIEDYQQTGFQGH 270
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
++C G + + L +PG HN LN+ A L+ K + ++ A L L+ F G
Sbjct: 271 YTVICPNGERI-DVLLNVPGRHNALNATA------ALVVAKEEGIKNEAILA-ALADFQG 322
Query: 419 VSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
RRFD +G + + DD+ HHPTEV +QAARQ + NK ++ +FQPH YSR
Sbjct: 323 AGRRFDQLGQFIRPNGKVMLVDDYGHHPTEVGVTIQAARQGWENKRVVMIFQPHRYSRTR 382
Query: 475 VLKDDFANALSEADQVVV 492
L DDF LS+ D +++
Sbjct: 383 DLFDDFVQVLSQVDALIM 400
>gi|418465288|ref|ZP_13036225.1| UDP-N-acetylmuramate--L-alanine ligase [Aggregatibacter
actinomycetemcomitans RhAA1]
gi|359756220|gb|EHK90379.1| UDP-N-acetylmuramate--L-alanine ligase [Aggregatibacter
actinomycetemcomitans RhAA1]
Length = 476
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 146/438 (33%), Positives = 221/438 (50%), Gaps = 61/438 (13%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+ R IHF+GIGG+G+ +A++ L +G+ +SGSD+ S+ + L +AGA + IGH
Sbjct: 11 IIPEMRRVKQIHFIGIGGAGMCGIAEILLNEGYSISGSDIAESAVTQRLAKAGAKVFIGH 70
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
NI G + VV SSAI DN E++ AK +P+ +R LA+L + IAV+
Sbjct: 71 QAENIAG------ASVVVISSAIHGDNPEVMAAKEARIPVIQRAQMLAELMRFRHGIAVA 124
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEAD 239
G+HGK+TT +M++ + G D P F +G + G N + EAD
Sbjct: 125 GTHGKTTTTAMVSMIYAEAGLD---------PTFVNGGLVKSAGTNAHLGCSRYLIAEAD 175
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCA 298
E D FL L P +++VTN++ +H+D + D D +K + FL + G V+C D
Sbjct: 176 ESDASFLHLQPMISIVTNIEPDHMDTYHGDFDEMKQTYVNFLHNLPFYGLAVLCADDAVL 235
Query: 299 RSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS 358
L+ Q+ + ++ITYGFS D+ E G
Sbjct: 236 MDLVPQVGR-------------------------QVITYGFSENADYRIEDYQQTGFQGH 270
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
++C G + + L +PG HN LN+ A L+ K + ++ A L L+ F G
Sbjct: 271 YTVICPNGERI-DVLLNVPGRHNALNATA------ALVVAKEEGIKNDAILA-ALADFQG 322
Query: 419 VSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
RRFD +G + + DD+ HHPTEV +QAARQ + NK ++ +FQPH YSR
Sbjct: 323 AGRRFDQLGQFIRPNGKVMLVDDYGHHPTEVGVTIQAARQGWENKRIVMIFQPHRYSRTR 382
Query: 475 VLKDDFANALSEADQVVV 492
L DDF LS+ D +++
Sbjct: 383 DLFDDFVQVLSQVDALIM 400
>gi|255994795|ref|ZP_05427930.1| UDP-N-acetylmuramate--alanine ligase [Eubacterium saphenum ATCC
49989]
gi|255993508|gb|EEU03597.1| UDP-N-acetylmuramate--alanine ligase [Eubacterium saphenum ATCC
49989]
Length = 464
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 158/464 (34%), Positives = 255/464 (54%), Gaps = 51/464 (10%)
Query: 70 DFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSV 129
DF + K IH +GIGG G+SA+A++ + +G+ VSGSD+ S + L+ GA + +GH
Sbjct: 3 DFSHYKN-IHCIGIGGIGMSAIAEILIDRGYNVSGSDMRESDSTDKLISMGARVALGHMA 61
Query: 130 SNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSG 188
N++ + + V+ ++AI DN E+L AKS+G+ + R L L +YN IA+SG
Sbjct: 62 KNVKED-----IDLVIYTAAIADDNPELLKAKSLGIKLLTRAEALGMLMSEYNTSIAISG 116
Query: 189 SHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGL 248
+HGK+TT SM++ +L D T +VG ++ +G++ G + FV EA EY FL L
Sbjct: 117 THGKTTTTSMVSLILNNAKKDPTILVGGNLSDI-NGNLKIGKSEYFVTEACEYMDSFLNL 175
Query: 249 SPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQD 308
P V ++ N+D +H+D F+D + + FR F + + G LVI D+
Sbjct: 176 RPKVELILNIDSDHLDYFDDIEHIAKSFRAFAELVPKDG-LVIGYDAN------------ 222
Query: 309 TGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP 368
+ + N S+ ++T+GFS +D+ AE + + QG + +C
Sbjct: 223 ---PFVKAALKNVSN----------VVTFGFSRGSDYVAEDIEFDHQGLPSFKICNGENV 269
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
+A + L+IPG HN+ N+LA A TL D ++ L++F G++RRFD++G
Sbjct: 270 VANVKLKIPGEHNIQNALAAAACTHTLGVDGSD-------IENTLNEFSGINRRFDIVGM 322
Query: 429 IYG-CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
I G + DD+AHHPTE+ A L AA++ N+ L +FQPHTY+R L DFA ALS+A
Sbjct: 323 IGGSVKLVDDYAHHPTEIEATLDAAKKMKHNR-LWCLFQPHTYTRTKALFSDFAPALSKA 381
Query: 488 DQVVVSAVLVFWLIIFAVSSFWL-IMAINSVICIVRSMLPEKQM 530
D +V++ I+A + ++ S++ ++ PEK++
Sbjct: 382 DIIVMNE-------IYAAREININKLSAKSIVEDIKKRFPEKEV 418
>gi|225575651|ref|ZP_03784261.1| hypothetical protein RUMHYD_03744 [Blautia hydrogenotrophica DSM
10507]
gi|225037108|gb|EEG47354.1| UDP-N-acetylmuramate--L-alanine ligase [Blautia hydrogenotrophica
DSM 10507]
Length = 459
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 152/428 (35%), Positives = 229/428 (53%), Gaps = 41/428 (9%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DF N IHF+GIGG +S LA++ L +GF++SGSD S + L GA + G
Sbjct: 4 IDF-NTPQHIHFIGIGGISMSGLAEILLDKGFQISGSDSKTSPLTQALEAKGAQIFYGQR 62
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVS 187
SNIQ + + VV ++AI DN E A +P+ R L ++ Y+ IAV+
Sbjct: 63 SSNIQDS-----VDVVVFTAAIHPDNPEYSCAVKKRLPMLTRAELLGQIMRNYDTPIAVA 117
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT SM++++L D T VG +P G+I G + FV EA EY FL
Sbjct: 118 GTHGKTTTTSMISHILLESDCDPTISVGGILPVI-GGNIRVGNSETFVTEACEYTNSFLS 176
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P ++++ N+D +H+D F+D + ++ FR F +++ G L+I D+
Sbjct: 177 FFPKISLILNIDADHLDFFKDIEDIRHSFRLFAEKLPADGTLIINSDTD----------- 225
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR 367
KY+ + DL + IITYG +S D+ A+++ N G + + + G
Sbjct: 226 ----KYTEII-----RDLPCE-----IITYGLNSNADYTAQNIQYNEYGYATFDCVKDGV 271
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
L SL +PG+HNV N+LA + L G ++ LK L F G RRF G
Sbjct: 272 NLGTYSLSVPGIHNVSNALATLVLGFKL-GLNSEA------LKTGLKHFQGTDRRFQYKG 324
Query: 428 TIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ + DD+AHHPTE++A L AA+ +P+K+L VFQPHTY+R L +FA AL+ A
Sbjct: 325 KVGEVTVIDDYAHHPTEIKATLTAAKN-YPHKSLWCVFQPHTYTRTKALLPEFARALTFA 383
Query: 488 DQVVVSAV 495
D VV++ +
Sbjct: 384 DHVVLADI 391
>gi|225017206|ref|ZP_03706398.1| hypothetical protein CLOSTMETH_01132 [Clostridium methylpentosum
DSM 5476]
gi|224949981|gb|EEG31190.1| hypothetical protein CLOSTMETH_01132 [Clostridium methylpentosum
DSM 5476]
Length = 457
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 156/424 (36%), Positives = 233/424 (54%), Gaps = 45/424 (10%)
Query: 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQG 134
K IHF+GIGGSG+ LA++ K+G+ ++GSD S + + G + +GH NI+G
Sbjct: 12 KKQIHFIGIGGSGMFPLAQILHKEGYNLTGSDNNESDILRMVRGLGIPVTLGHRAENIKG 71
Query: 135 NDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKS 193
D +V ++AI +DN E++ AK G+P +R L +TE+Y + I VSG+HGK+
Sbjct: 72 AD------LIVYTAAIMEDNPELIAAKQSGIPTIERCVLLGLITERYSDCICVSGTHGKT 125
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT SML +L G D +A++G + +G G + V EA E+ FL LSP +A
Sbjct: 126 TTTSMLTQILLDAGKDPSAVIGGKLKSI-EGYGRSGSSEVMVCEACEFVDTFLHLSPDIA 184
Query: 254 VVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 313
VV N+D +H+D F+ + +K F +F ++ ++C + Y
Sbjct: 185 VVLNIDRDHMDYFKTMENLKLSFEKFCRKA-----------TKC-------------ILY 220
Query: 314 SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPLAQI 372
+G S+++ G+ D + +T+GFS ND+Y +V +V G + + L +G L +
Sbjct: 221 NGD--DANSAEVAGR-VDQRKVTFGFSDQNDYYPANV-QHVDGLHTTFDLMHKGERLTSL 276
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC 432
+L +PG HN+LN+ A A L Q E L F G RRF+L+G I G
Sbjct: 277 NLFVPGDHNILNATAACAAALETGVRPEQLAEG-------LGNFKGAGRRFELLGKINGI 329
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
I DD+AHHP E++ LQAA+ NK + AV QP TYSR +L DDFA ALS ADQVV+
Sbjct: 330 TIVDDYAHHPAEIKVTLQAAQSLNFNK-VWAVHQPFTYSRTAMLLDDFAEALSIADQVVL 388
Query: 493 SAVL 496
S ++
Sbjct: 389 SEIM 392
>gi|251792024|ref|YP_003006744.1| UDP-N-acetylmuramate--L-alanine ligase [Aggregatibacter aphrophilus
NJ8700]
gi|422336826|ref|ZP_16417798.1| UDP-N-acetylmuramate-L-alanine ligase [Aggregatibacter aphrophilus
F0387]
gi|247533411|gb|ACS96657.1| UDP-N-acetylmuramate--alanine ligase [Aggregatibacter aphrophilus
NJ8700]
gi|353345836|gb|EHB90125.1| UDP-N-acetylmuramate-L-alanine ligase [Aggregatibacter aphrophilus
F0387]
Length = 476
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 148/438 (33%), Positives = 222/438 (50%), Gaps = 61/438 (13%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+ R IHF+GIGG+G+ +A++ L +G+ +SGSD+ S+ + L +AGA + IGH
Sbjct: 11 IIPEMRRVKQIHFIGIGGAGMCGIAEILLNEGYCISGSDIAESAVTQRLTKAGAKVFIGH 70
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
S NI G + VV SSAI DN E++ AK +P+ +R LA+L + IAV+
Sbjct: 71 SAENIIG------ASVVVISSAIHGDNPEVMAAKKARIPVIQRAQMLAELMRFRHGIAVA 124
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEAD 239
G+HGK+TT +M++ + G D P F +G + G N + EAD
Sbjct: 125 GTHGKTTTTAMVSMIYAQAGLD---------PTFVNGGLVKSAGTNAHLGCSRYLIAEAD 175
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCA 298
E D FL L P +++VTN++ +H+D + D D +K + FL + G V+C D
Sbjct: 176 ESDASFLHLQPMISIVTNIEPDHMDTYHGDFDEMKQTYVNFLHNLPFYGLAVLCADDADL 235
Query: 299 RSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS 358
SL+ Q+ + ++ITYGFS D+ E G
Sbjct: 236 MSLVPQVGR-------------------------QVITYGFSENADYRIEDYQQTGFQGH 270
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
++C G + + L +PG HN LN+ A L+ K + ++ A L L+ F G
Sbjct: 271 YTVICPNGERI-DVLLNVPGRHNALNATA------ALVVAKEEGIKNEAILA-ALADFQG 322
Query: 419 VSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
RRFD +G + DD+ HHPTEV +QAARQ + NK ++ +FQPH YSR
Sbjct: 323 AGRRFDQLGQFIRPNGKVMLVDDYGHHPTEVGVTIQAARQGWENKRVVMIFQPHRYSRTR 382
Query: 475 VLKDDFANALSEADQVVV 492
L DDF LS+ D +++
Sbjct: 383 DLFDDFVQVLSQVDALIM 400
>gi|195952962|ref|YP_002121252.1| UDP-N-acetylmuramate/alanine ligase [Hydrogenobaculum sp. Y04AAS1]
gi|254766006|sp|B4U813.1|MURC_HYDS0 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|195932574|gb|ACG57274.1| UDP-N-acetylmuramate/alanine ligase [Hydrogenobaculum sp. Y04AAS1]
Length = 449
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 159/467 (34%), Positives = 243/467 (52%), Gaps = 59/467 (12%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
F+ + HF+GIGG G+S +AK+ L G+EVSGSD+ + ++ L E GA ++IGH
Sbjct: 2 FREKFRKFHFIGIGGIGMSGIAKILLDMGYEVSGSDVRQNDVIKELKEKGATIYIGHDAK 61
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N+ G + VV SSAI N E+L AK +G+ + R LA L IA+SGSH
Sbjct: 62 NVIGKE------VVVYSSAISNVNEELLKAKELGLQVISRGDMLADLFRMKEGIAISGSH 115
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT SM++++ G D T ++G + F ++ G + + EADE DG FL L+
Sbjct: 116 GKTTTTSMISHISHIAGLDPTVLIGGILQTFGSNAVL-GKSELLISEADESDGSFLKLNS 174
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
+ VVTN+D EH+ ++D + +K F +F+ + G V+ D RS+L +I +
Sbjct: 175 VINVVTNIDKEHIGYYKDYEDIKEAFVKFINNVPFYGASVVNIDDTGVRSILSKIHK--- 231
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
KIITYG S D+ A+++ N + + + +G L
Sbjct: 232 ----------------------KIITYGIES-GDFQAKNIVFN-SDNTRFDVFYKGIKLN 267
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
I LQIPG+HNV N+LA IA V TL+ ++ ++ L F RR + +G
Sbjct: 268 TIELQIPGIHNVYNALASIA-VSTLMEIEQ------PVIRDALKSFKNAKRRIEFVGEKN 320
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
IYDD+ HHPTE+++V +A + ++ +K ++ VFQPH YSR L DDF + D+
Sbjct: 321 TNLIYDDYGHHPTEIKSVYEALKSKYKDKNIVVVFQPHRYSRTYYLIDDFVDLFKSLDK- 379
Query: 491 VVSAVLVFWLII--------FAVSSFWLIMAINSVICIVRSMLPEKQ 529
VF L I F +SS +I ++ C+ +P K+
Sbjct: 380 ------VFLLDIYGASEENTFGISSLDMINKVSKEECV---YIPSKE 417
>gi|260893411|ref|YP_003239508.1| UDP-N-acetylmuramate--L-alanine ligase [Ammonifex degensii KC4]
gi|260865552|gb|ACX52658.1| UDP-N-acetylmuramate/alanine ligase [Ammonifex degensii KC4]
Length = 461
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 155/418 (37%), Positives = 225/418 (53%), Gaps = 40/418 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HFVGIGG G+S LA L +QG EV+GSD S +++ L +G ++ H+ +N+
Sbjct: 10 LHFVGIGGVGMSGLALLLKQQGHEVTGSDTGDSYFLQTLKLSGIRVYNRHAPANLAPET- 68
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSAI DN E+L A+ +P+ +R LA + Y IAV+G+HGK+TT +
Sbjct: 69 ----ELVVVSSAIKPDNPELLAAREREIPVIRRGELLAWVMRDYRGIAVAGAHGKTTTTA 124
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A VL A G D T +VG + P +G+ G G FV EADE D FL L+P +AVVTN
Sbjct: 125 MVANVLLAGGLDPTVLVGGYWPLI-EGNCRLGKGSYFVTEADESDASFLLLTPMLAVVTN 183
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
++ +H+D + + +A+ FR FL +I G V+C DS R L+ GV
Sbjct: 184 IENDHLDYYGNLEALLGAFRTFLARIEPPGTAVVCLDSPLVRQLI-------------GV 230
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
+ + +ITYG D+ + V S +L RGR L Q+ L +P
Sbjct: 231 L------------NIPVITYGMEEGADYILKKV-ELSGSSSSALLYYRGRLLGQLKLNLP 277
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD 437
G HN+LN+ A +A L A L++F V RRF+ +G G + DD
Sbjct: 278 GKHNLLNAAAAVAVGAYL-------GVPFAVASQALAEFRSVRRRFEFLGEAGGVMVVDD 330
Query: 438 FAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
+AHHPTEV+A ++AARQ + L+ VFQPH Y+R +L +F + AD +V+ +
Sbjct: 331 YAHHPTEVQATIEAARQIHRGR-LVVVFQPHRYTRTALLYPEFGRSFFGADVLVLDEI 387
>gi|167747842|ref|ZP_02419969.1| hypothetical protein ANACAC_02571 [Anaerostipes caccae DSM 14662]
gi|167652737|gb|EDR96866.1| UDP-N-acetylmuramate--L-alanine ligase [Anaerostipes caccae DSM
14662]
Length = 433
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 150/433 (34%), Positives = 229/433 (52%), Gaps = 50/433 (11%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DFK + IHF+GIGG +S LA++ LK+GF VSGSD+ S E L GA + +G
Sbjct: 4 IDFK-KPIHIHFMGIGGISMSGLAEILLKEGFTVSGSDIRSSDITEKLSSLGAKVFLGQV 62
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVS 187
NI + + VV ++AI +N E A G+P+ KR L ++ Y N +AVS
Sbjct: 63 AENITDD-----IDLVVYTAAIHPENEEYKAALQKGIPLMKRATLLGQMMHNYKNAVAVS 117
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT SML+++L A D T VG + DG+I G FV EA EY FL
Sbjct: 118 GTHGKTTTTSMLSHILLAGETDPTITVGG-ILDIIDGNIRVGHSNVFVTEACEYTNSFLE 176
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P ++++ N++ +H+D F D + ++ F++F ++ G LV+ G+ +++ +K
Sbjct: 177 FFPKISIILNIEEDHMDFFHDINEIRDSFKKFAHKLPEDGLLVLNGEIDDISYIVEGLKA 236
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFND---WYAESVCPNVQGGSDYILCE 364
K +TYG ND + A+++ + G + L +
Sbjct: 237 -------------------------KYVTYGID--NDEFTYTAKNISYDSMGHGHFDLYK 269
Query: 365 RGRPLAQISLQIPGVHNVLNSL--AVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRR 422
G + +SL + G+HN+ N+L A +A L L SI +K L F G RR
Sbjct: 270 EGTFVDSLSLNVNGLHNINNALSAAAVADFLGL---------SIDTVKAGLLTFSGAKRR 320
Query: 423 FDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFAN 482
F+ GT G + DD+AHHPTE++A L A + +P+K L VFQPHTY+R D+FA
Sbjct: 321 FEYKGTCGGFTVIDDYAHHPTEIKATLNACKN-YPHKELWCVFQPHTYTRTNAFLDEFAE 379
Query: 483 ALSEADQVVVSAV 495
ALS+ D V+++ +
Sbjct: 380 ALSQCDHVIITDI 392
>gi|224368385|ref|YP_002602548.1| protein MurC [Desulfobacterium autotrophicum HRM2]
gi|259509767|sp|C0Q8P4.1|MURC_DESAH RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|223691101|gb|ACN14384.1| MurC [Desulfobacterium autotrophicum HRM2]
Length = 456
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 147/431 (34%), Positives = 223/431 (51%), Gaps = 49/431 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
I+FVGIGG G+SA+A+L L G+ VSGSDL S+ + L GA + GH ++ D
Sbjct: 8 IYFVGIGGIGMSAIAELLLSLGYRVSGSDLKLSAITQRLASCGATIFNGHRADQVKDVD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V S+AI ++N E++ A + R LA+L IAVSG+HGK++T +
Sbjct: 67 -----VLVTSTAISKNNPEVIEAAERSIRTIPRAEMLAELMRIKYAIAVSGAHGKTSTTA 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A +L G D T +VG + + +G G V EADE DG FL +P++A VTN
Sbjct: 122 MIATILNQAGLDPTVVVGGLLKSIGTNA-HHGKGDYIVAEADESDGSFLKYAPAIAAVTN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D EH+D ++D + +K F +F+ + G V+C D++ +++L +I +Y+
Sbjct: 181 IDLEHLDFYKDIEDIKDNFVKFINSVPFYGLAVLCLDNEHIQAILPRITA----RYT--- 233
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP-LAQISLQI 376
T+G S+ D A + +G Y G+ L I+L +
Sbjct: 234 ------------------TFGLSAQADLAARGI--RFEGRRGYFTVVHGKEVLGDITLNL 273
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
G HN+ N+LA IA L L D + +K L + GV RR ++ G + D
Sbjct: 274 SGKHNISNALAAIAVALELKVD-------FSVIKEALEQIEGVKRRLEIKGERNSITVVD 326
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAVL 496
D+ HHPTEV+ L A R+ +P+K ++ VFQPH YSR L D+F A ++D L
Sbjct: 327 DYGHHPTEVKTTLAAVREGWPDKRVVVVFQPHRYSRTKALFDEFTRAFYQSD-------L 379
Query: 497 VFWLIIFAVSS 507
+F L I+A S
Sbjct: 380 LFVLPIYAASE 390
>gi|320527324|ref|ZP_08028509.1| UDP-N-acetylmuramate--alanine ligase [Solobacterium moorei F0204]
gi|320132348|gb|EFW24893.1| UDP-N-acetylmuramate--alanine ligase [Solobacterium moorei F0204]
Length = 459
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 152/433 (35%), Positives = 223/433 (51%), Gaps = 44/433 (10%)
Query: 65 EECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANL- 123
E +DF N+ I F+GIGG +S LAK+ +GF+VSGSD + + L + GA +
Sbjct: 2 ERYTLDF-NKPVHIFFIGIGGISMSGLAKVLADRGFQVSGSDNHETELTKMLEQHGAKVF 60
Query: 124 HIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-N 182
+ G NI + + VV ++AI DN E + + +P+ R L +L E Y +
Sbjct: 61 YGGQKAENITDD-----IDVVVYTAAIHPDNPEYVSSVEKKIPMMTRAELLGELMENYKH 115
Query: 183 LIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYD 242
IAVSG+HGK+TT SML+Y+L A D T +G + G+I G G+ F+ EA EY
Sbjct: 116 SIAVSGTHGKTTTTSMLSYILMAANTDPTISLGGMLAHI-GGNIRVGRGQTFLTEACEYT 174
Query: 243 GCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLL 302
FL L P V ++ N++ +H+D F+D D ++ FRRF I+ GG LVI Q ++
Sbjct: 175 NSFLELKPLVGIILNVEADHLDFFKDLDDIRLSFRRFASGIKEGGTLVINHSIQDKEYII 234
Query: 303 DQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYIL 362
K G V++ F D +A ++ + G + +
Sbjct: 235 GDFK--------GTVIT-------------------FGEDGDMHARNIAYDALGNPGFEV 267
Query: 363 CERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRR 422
+ L + L +PG HNV N+LA IAT ++ D A +K L + GV RR
Sbjct: 268 YYKDEKLGDVQLLVPGKHNVDNALAAIATAYSIGID-------FAAIKQGLVSYSGVDRR 320
Query: 423 FDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFAN 482
F G G + DD+AHHP E+ A L AA+ +P+K L VFQPHTYSR + L +FA
Sbjct: 321 FQYKGKCNGATVIDDYAHHPQEIEATLNAAKH-YPHKKLYVVFQPHTYSRTIALLPEFAK 379
Query: 483 ALSEADQVVVSAV 495
AL AD V+++ +
Sbjct: 380 ALENADVVILAKI 392
>gi|164688866|ref|ZP_02212894.1| hypothetical protein CLOBAR_02514 [Clostridium bartlettii DSM
16795]
gi|164602070|gb|EDQ95535.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium bartlettii DSM
16795]
Length = 450
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 147/421 (34%), Positives = 224/421 (53%), Gaps = 45/421 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG +SALA++ + + + VSGSD+ S E L GA + IGH+ NI +
Sbjct: 3 IHFIGIGGISMSALAEICINKKYNVSGSDMHGSELTEKLASQGAKIFIGHAKENISDD-- 60
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKSTTA 196
+ VV ++AI DN E++ AK+ R +L +L +Y N IAVSG+HGK+TT
Sbjct: 61 ---IDIVVYTAAIHPDNPELIEAKNKNKLTINRAAFLGQLMREYKNSIAVSGTHGKTTTT 117
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SML+ + + D T +VG ++ G++ G +F+ EA EY FL +P +A+V
Sbjct: 118 SMLSTIFEHAELDPTILVGGNLKSIG-GNVKIGHSDHFITEACEYVDSFLNFNPKIAIVL 176
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F D +K+ F +F K + G+ VI GD
Sbjct: 177 NIEEDHLDYFSGIDEIKASFNKFGKLLPSDGYFVINGD---------------------- 214
Query: 317 VVSNQSSDLWGQGHDYKI--ITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISL 374
NQ+ D+ HD K I +G ND E++ + G + L G+ L L
Sbjct: 215 ---NQNMDIL---HDVKAKAIKFGKKESNDVIIENIAFDDLGCGSFDLNYMGKKLTGFKL 268
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHI 434
+PG+HN+ N+ + I +++L+ S + +K + + GV RRF+ G G I
Sbjct: 269 SVPGLHNIYNATSAI--IVSLV-----SGIDLETVKEGIIDYTGVGRRFERKGQYNGAAI 321
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSA 494
DD+AHHPTE++A L A+ RF L VFQPHTYSR + L D+FA A AD+V+++
Sbjct: 322 IDDYAHHPTEIKATLSTAK-RFKKGTLWCVFQPHTYSRTISLLDEFAEAFYSADKVIITD 380
Query: 495 V 495
+
Sbjct: 381 I 381
>gi|317473718|ref|ZP_07933005.1| UDP-N-acetylmuramate-alanine ligase [Anaerostipes sp. 3_2_56FAA]
gi|316898839|gb|EFV20866.1| UDP-N-acetylmuramate-alanine ligase [Anaerostipes sp. 3_2_56FAA]
Length = 460
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 150/433 (34%), Positives = 229/433 (52%), Gaps = 50/433 (11%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DFK + IHF+GIGG +S LA++ LK+GF VSGSD+ S E L GA + +G
Sbjct: 4 IDFK-KPIHIHFMGIGGISMSGLAEILLKEGFTVSGSDIRSSDITEKLSSLGAKVFLGQV 62
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVS 187
NI + + VV ++AI +N E A G+P+ KR L ++ Y N +AVS
Sbjct: 63 AENITDD-----IDLVVYTAAIHPENEEYKAALQKGIPLMKRATLLGQMMHNYKNAVAVS 117
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT SML+++L A D T VG + DG+I G FV EA EY FL
Sbjct: 118 GTHGKTTTTSMLSHILLAGETDPTITVGG-ILDIIDGNIRVGHSNVFVTEACEYTNSFLE 176
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P ++++ N++ +H+D F D + ++ F++F ++ G LV+ G+ +++ +K
Sbjct: 177 FFPKISIILNIEEDHMDFFHDINEIRDSFKKFAHKLPEDGLLVLNGEIDDISYIVEGLKA 236
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFND---WYAESVCPNVQGGSDYILCE 364
K +TYG ND + A+++ + G + L +
Sbjct: 237 -------------------------KYVTYGID--NDEFTYTAKNISYDSMGHGHFDLYK 269
Query: 365 RGRPLAQISLQIPGVHNVLNSL--AVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRR 422
G + +SL + G+HN+ N+L A +A L L SI +K L F G RR
Sbjct: 270 EGTFVDSLSLNVNGLHNINNALSAAAVADFLGL---------SIDTVKAGLLTFSGAKRR 320
Query: 423 FDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFAN 482
F+ GT G + DD+AHHPTE++A L A + +P+K L VFQPHTY+R D+FA
Sbjct: 321 FEYKGTCGGFTVIDDYAHHPTEIKATLNACKN-YPHKELWCVFQPHTYTRTNAFLDEFAE 379
Query: 483 ALSEADQVVVSAV 495
ALS+ D V+++ +
Sbjct: 380 ALSQCDHVIITDI 392
>gi|242278166|ref|YP_002990295.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfovibrio salexigens
DSM 2638]
gi|259509766|sp|C6BYG5.1|MURC_DESAD RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|242121060|gb|ACS78756.1| UDP-N-acetylmuramate/alanine ligase [Desulfovibrio salexigens DSM
2638]
Length = 470
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 147/425 (34%), Positives = 223/425 (52%), Gaps = 41/425 (9%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
++R G IH +GIGGSG+S +A++ + GF V+GSDL + ++ LL+ GA + IGH
Sbjct: 1 MRSRVGNIHMIGIGGSGMSGIAEVLINMGFTVTGSDLAAGAPVKRLLKMGAQVFIGHGAD 60
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N+ D VV S+AI DN E++ A+ +G+PI R LA+L IAV+G+H
Sbjct: 61 NVNDAD------VVVKSTAISDDNPELVKARELGIPIIPRAEMLAELMRLRTGIAVAGTH 114
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S+LA + D T I+G + F + G G+ + EADE DG FL L+P
Sbjct: 115 GKTTTTSLLATIFTEAELDPTVIIGGRLNTFGSNARL-GDGQFLIAEADESDGSFLCLAP 173
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
+ VVTN+D +H+D + ++A+ FR+F+ I G V+CGD + LL IK+
Sbjct: 174 IITVVTNVDKDHLDFYGGQEAIDESFRKFMNSIPFYGMNVVCGDDPGVQRLLPSIKR--- 230
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
+TYG + N E + V+ L E+ L
Sbjct: 231 ----------------------PCMTYGLNKGNRLRGEILSCEVRSLFKVYLDEK--LLG 266
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
++SL PG HNVLN+L I L D + + LS FMGV RRF+ G
Sbjct: 267 EVSLAQPGKHNVLNALGAIGVSLEAGLDPK-------VILSGLSNFMGVGRRFEKKGESK 319
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
G + DD+ HHP E++A ++ A+ FP + L+ FQPH ++R L +F +AD++
Sbjct: 320 GILVVDDYGHHPAEIQATIETAKSCFPQRRLVVAFQPHRFTRTEALFGEFCKTFEKADEL 379
Query: 491 VVSAV 495
+++ +
Sbjct: 380 LLTEI 384
>gi|452943787|ref|YP_007499952.1| UDP-N-acetylmuramate--L-alanine ligase [Hydrogenobaculum sp. HO]
gi|452882205|gb|AGG14909.1| UDP-N-acetylmuramate--L-alanine ligase [Hydrogenobaculum sp. HO]
Length = 449
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 160/467 (34%), Positives = 242/467 (51%), Gaps = 59/467 (12%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
F+ + HF+GIGG G+S +AK+ L G+EVSGSD+ + ++ L E GA ++IGH
Sbjct: 2 FREKFRKFHFIGIGGIGMSGIAKILLDMGYEVSGSDVRENDVIKELKEKGATVYIGHDAK 61
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N+ G + VV SSAI N E+L AK +G+ + R LA L IA+SGSH
Sbjct: 62 NVIGKE------VVVYSSAISNVNEELLKAKELGLQVISRGDMLADLFRMKEGIAISGSH 115
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT SM++++ G D T ++G + F ++ G + + EADE DG FL L+
Sbjct: 116 GKTTTTSMISHISHIAGLDPTVLIGGILQTFGSNAVL-GKSELLISEADESDGSFLKLNS 174
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
+ VVTN+D EH+ ++D + +K F F+ + G V+ D RS+L +I +
Sbjct: 175 VINVVTNIDKEHIGYYKDYEDIKEAFVNFINNVPFYGASVVNIDDTGVRSILSKIHK--- 231
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
KIITYG S D+ A+++ N + + + +G L
Sbjct: 232 ----------------------KIITYGIES-GDFQAKNIVFN-SDNTRFDVFYKGIKLN 267
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
I LQIPG+HNV N+LA IA V TL+ ++ ++ L F RR + +G
Sbjct: 268 TIELQIPGIHNVYNALASIA-VSTLMEIEQ------PVIREALKSFKNAKRRIEFVGEKN 320
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
IYDD+ HHPTE+++V +A + ++ +K ++ VFQPH YSR L DDF + D+
Sbjct: 321 TNLIYDDYGHHPTEIKSVYEALKSKYKDKNIVVVFQPHRYSRTYYLIDDFVDLFKSLDK- 379
Query: 491 VVSAVLVFWLII--------FAVSSFWLIMAINSVICIVRSMLPEKQ 529
VF L I F +SS +I ++ CI +P K+
Sbjct: 380 ------VFLLDIYGASEENTFGISSLDMINKVSKEECI---YIPSKE 417
>gi|160937437|ref|ZP_02084798.1| hypothetical protein CLOBOL_02328 [Clostridium bolteae ATCC
BAA-613]
gi|158439506|gb|EDP17256.1| hypothetical protein CLOBOL_02328 [Clostridium bolteae ATCC
BAA-613]
Length = 472
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 148/429 (34%), Positives = 230/429 (53%), Gaps = 41/429 (9%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DF N+ +HF+GIGG +S LA++ L +GF +SGSD ++ E L GA ++ G
Sbjct: 15 IDF-NKPEHVHFIGIGGISMSGLAEILLDEGFSISGSDSHETALTEHLETKGARVYYGQR 73
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVS 187
+NI+ G + VV ++AI +DN E A+ G+P+ R L +L Y IA+S
Sbjct: 74 AANIEREPGI---SVVVYTAAIHEDNPEFRAARDQGLPMLSRAELLGELMRNYKEAIAIS 130
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT SML +L A D T VG + G+I GG FV EA EY FL
Sbjct: 131 GTHGKTTTTSMLTDILLAGDLDPTISVGGILKDI-GGNIRVGGPDLFVTEACEYTNSFLS 189
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P++ V+ N++ +H+D F+D + ++ FR F +++ G LV+ S ++++++
Sbjct: 190 FYPTMEVILNVEEDHLDFFKDIEDIRHSFRLFAEKLPAKGLLVV-------NSGIEKVEE 242
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR 367
T +G +++T+G + + A ++ + Y L +G
Sbjct: 243 IT------------------RGLRCRVVTFGKDLSSTYTARNITYDGFARPSYDLVVQGE 284
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
+ +I+L + G HNV NSLA IA L L +G + L +F G RRF+
Sbjct: 285 TVTRITLGVTGEHNVYNSLAAIAIALELGVG--------FDAIMSGLGRFTGTDRRFEKK 336
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G + G + DD+AHHP E++A L AAR +P++ L VFQPHTY+R D FA ALS
Sbjct: 337 GEVAGVTVIDDYAHHPQEIKATLAAARN-YPHRKLWCVFQPHTYTRTRAFLDQFAEALSA 395
Query: 487 ADQVVVSAV 495
AD+VV++ +
Sbjct: 396 ADEVVLADI 404
>gi|416052131|ref|ZP_11578047.1| UDP-N-acetylmuramate--alanine ligase [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|347992401|gb|EGY33804.1| UDP-N-acetylmuramate--alanine ligase [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
Length = 476
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 146/438 (33%), Positives = 220/438 (50%), Gaps = 61/438 (13%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+ R IHF+GIGG+G+ +A++ L +G+ V+GSD+ S+ + L +AGA + IGH
Sbjct: 11 IIPEMRRVKQIHFIGIGGAGMCGIAEILLNEGYSVAGSDIAESAVTQRLAKAGAKVFIGH 70
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
NI G + VV SSAI DN E++ AK +P+ +R LA+L + IAV+
Sbjct: 71 QAENIAG------ASVVVISSAIHGDNPEVIEAKDARIPVIQRAQMLAELMRFRHGIAVA 124
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEAD 239
G+HGK+TT +M++ + G D P F +G + G N + EAD
Sbjct: 125 GTHGKTTTTAMVSMIYAEAGLD---------PTFVNGGLVKSAGTNAHLGCSRYLIAEAD 175
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCA 298
E D FL L P +++VTN++ +H+D + D D +K + FL + G V+C D
Sbjct: 176 ESDASFLHLQPMISIVTNIEPDHMDTYHGDFDEMKQTYVNFLHNLPFYGLAVLCADDAVL 235
Query: 299 RSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS 358
L+ Q+ + ++ITYGFS D+ E G
Sbjct: 236 MGLVPQVGR-------------------------QVITYGFSENADYRIEDYQQTGFQGH 270
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
++C G + + L +PG HN LN+ A L+ K + ++ A L L+ F G
Sbjct: 271 YTVICPNGERI-DVLLNVPGRHNALNATA------ALVVAKEEGIKNDAILA-ALADFQG 322
Query: 419 VSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
RRFD +G + DD+ HHPTEV +QAARQ + NK ++ +FQPH YSR
Sbjct: 323 AGRRFDQLGQFIRPNGKVMLVDDYGHHPTEVGVTIQAARQGWENKRIVMIFQPHRYSRTR 382
Query: 475 VLKDDFANALSEADQVVV 492
L DDF LS+ D +++
Sbjct: 383 DLFDDFVQVLSQVDVLIM 400
>gi|116626350|ref|YP_828506.1| UDP-N-acetylmuramate--L-alanine ligase [Candidatus Solibacter
usitatus Ellin6076]
gi|123319314|sp|Q01Q49.1|MURC_SOLUE RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|116229512|gb|ABJ88221.1| UDP-N-acetylmuramate--L-alanine ligase [Candidatus Solibacter
usitatus Ellin6076]
Length = 472
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 152/420 (36%), Positives = 219/420 (52%), Gaps = 42/420 (10%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R +HF GIGG G+S +A++ L G+++SGSD+ S E L GA + GH+ SNI
Sbjct: 15 RPQHLHFTGIGGIGMSGIAEVLLNLGYQISGSDVKLSPITERLAAMGARVFEGHAASNIA 74
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
G A+V SSA+ + N E+ A+ + +P+ R LA+L IAV+GSHGK+
Sbjct: 75 G------ARALVVSSAVDEQNPEVQEARRISIPVIPRGELLAELMRLKYGIAVAGSHGKT 128
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT SM A +L G D T +VG V + G V+E+DE DG FL L+P +A
Sbjct: 129 TTTSMAATILNYAGLDPTVVVGGRVGTMGGSNARVGHSDFLVVESDESDGSFLKLAPIIA 188
Query: 254 VVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 313
VVTN+D EH+D + D DA+++ F F+ ++ G +++C D + LL +I++ T
Sbjct: 189 VVTNVDREHLDHYPDLDAIRAAFLEFVNKVPFYGAVIVCLDDANVQGLLPEIRRRT---- 244
Query: 314 SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESV-CPNVQGGSDYILCERGRPLAQI 372
ITYG ++ D A + C S++ L R L +
Sbjct: 245 ---------------------ITYGTTAQADMEAGDISCGPF--ASEFRLRYRTADLGRF 281
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC 432
L IPG HNVLN++A IA + L ++ L F GV RRF L G G
Sbjct: 282 RLHIPGRHNVLNAMAAIAVAMEL-------EVKPDTIREALETFSGVDRRFQLRGQERGI 334
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+ DD+ HHPTE+RA L ARQ + + +FQPH Y+R L D+FA + +AD + V
Sbjct: 335 AVVDDYGHHPTEIRATLDGARQ-CGFRRIHVLFQPHRYTRTFHLMDEFARSFHQADSLFV 393
>gi|404483067|ref|ZP_11018292.1| UDP-N-acetylmuramate-alanine ligase [Clostridiales bacterium
OBRC5-5]
gi|404344157|gb|EJZ70516.1| UDP-N-acetylmuramate-alanine ligase [Clostridiales bacterium
OBRC5-5]
Length = 458
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 140/419 (33%), Positives = 222/419 (52%), Gaps = 41/419 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
I+F GIGG +S LA++ ++ FEVSGSD ++ + L + G + +G NI +
Sbjct: 12 IYFCGIGGISMSGLARVLFEKNFEVSGSDTKANNRTKDLEDRGVKIFVGQKKENISDD-- 69
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTTA 196
+ V ++AI +DN E + AK + + R L + K+ IA+SG+HGK+TT
Sbjct: 70 ---IDLFVYTAAIHKDNPEFIAAKEKNIKMMTRAELLGYVMSKFKESIAISGTHGKTTTT 126
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SML+Y+L D T VG V + G+I+ G G FV EA EY FL L P+V V+
Sbjct: 127 SMLSYILLDTKLDPTISVGGIVKKIK-GNIYIGKGDTFVTEACEYTNSFLELYPTVGVIL 185
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F+D + ++ F++F+K G ++I D+I + +
Sbjct: 186 NIEEDHLDFFKDLNEIRDSFKKFVKNTSPKGCIIIN----------DKITNNREIT---- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
QG++ I+ YG + +D YA ++ + G + L + + L +
Sbjct: 232 -----------QGYEGNIVRYGTEN-SDCYATNIRYDALGYPTFDLVHKEETYEDVKLCV 279
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
G HN+ N+LA I L SI ++ LS+F GV RRF++ G + G I D
Sbjct: 280 GGNHNIYNALAAICVAFEL-------GVSIEDIRKGLSEFKGVDRRFEVKGKLDGITIVD 332
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHP+E+ A L A+ R+P+ L+ VFQPHTY+R D+FANAL D+V+++ +
Sbjct: 333 DYAHHPSEISATLNIAK-RYPHDRLVVVFQPHTYTRTKAFFDEFANALKNVDEVIIAKI 390
>gi|402312648|ref|ZP_10831572.1| UDP-N-acetylmuramate--L-alanine ligase [Lachnospiraceae bacterium
ICM7]
gi|400369106|gb|EJP22109.1| UDP-N-acetylmuramate--L-alanine ligase [Lachnospiraceae bacterium
ICM7]
Length = 458
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 141/419 (33%), Positives = 219/419 (52%), Gaps = 41/419 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
I+F GIGG +S LA++ ++ FEVSGSD ++ + L + G + +G NI +
Sbjct: 12 IYFCGIGGISMSGLARVLFEKNFEVSGSDTKANNRTKDLEDRGVKIFVGQKSENISDD-- 69
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTTA 196
+ V ++AI DN E + AK + + R L + K+ IA+SG+HGK+TT
Sbjct: 70 ---IDLFVYTAAIHNDNPEFIAAKEKNIKMMTRAELLGYVMSKFKESIAISGTHGKTTTT 126
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SML+Y+L D T VG V + G+I+ G G FV EA EY FL L P+V V+
Sbjct: 127 SMLSYILLDTKLDPTISVGGIVKKIK-GNIYIGKGDTFVTEACEYTNSFLELYPTVGVIL 185
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F+D D +++ F+ F K G ++I D+IK + +
Sbjct: 186 NIEEDHLDFFKDLDEIRNSFKNFAKNTSPDGCIIIN----------DKIKNNREIT---- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
QG + ++ YG + +D YA ++ + G + L + + L +
Sbjct: 232 -----------QGFEGNVVRYGTEN-SDCYATNIRYDALGYPTFDLVHKEETYENVKLCV 279
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
G HN+ N+LA I L SI ++ LS+F GV RRF++ G + G I D
Sbjct: 280 GGNHNIYNALAAICVAFEL-------GVSIEDIRKGLSEFKGVDRRFEVKGKLDGITIVD 332
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHP+E+ A L A+ R+P+ L+ VFQPHTY+R DDFAN L D+V+++ +
Sbjct: 333 DYAHHPSEISATLNIAK-RYPHDRLVVVFQPHTYTRTKAFFDDFANVLKNVDEVIIAKI 390
>gi|210634199|ref|ZP_03298039.1| hypothetical protein COLSTE_01961 [Collinsella stercoris DSM 13279]
gi|210158889|gb|EEA89860.1| UDP-N-acetylmuramate--L-alanine ligase [Collinsella stercoris DSM
13279]
Length = 474
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 147/454 (32%), Positives = 238/454 (52%), Gaps = 47/454 (10%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
HF+G+GG+G+S +A + ++GF+V+GSDL S Y+ L AG +H+GH + I
Sbjct: 19 HFIGVGGAGMSGIALVLHERGFKVTGSDLKTSRYVRQLTRAGVEVHVGHEAATIDAVQ-- 76
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
P+ VV S+AIP+ N E++ A+ +G+P++ R L+ L +A +G+HGK+TT+SM
Sbjct: 77 --PDVVVVSTAIPETNPELMRARELGIPVWHRAKMLSALGYGRTTVAAAGTHGKTTTSSM 134
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
+A +L MG D + ++G V + G G+ FV+EADE D FL L+P V +VTN+
Sbjct: 135 VATMLDRMGLDPSFLIGGVVEGYGTNGK-NGDGEYFVVEADESDSSFLYLNPHVVIVTNV 193
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVV 318
+ +H+D + + ++ F F+ + G +++CG+ L ++ + TG
Sbjct: 194 EADHMDHYSSLEEIEDTFCAFMNLVGEDGTVIVCGEDPH----LVELARSTG-------- 241
Query: 319 SNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQ-IP 377
++TYG D + + G+D+ + + ++++ P
Sbjct: 242 -------------RAVLTYGEGEGFDVSCAPMASSHTFGTDFSVTLPDGAVRTVAIKNNP 288
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD 437
G HN+LN+ A +A+ L D + + LS F G RRF +G G + DD
Sbjct: 289 GRHNMLNATAALASAYVLGLDTEDAARA-------LSTFEGARRRFTHVGETRGVMLVDD 341
Query: 438 FAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAVL- 496
+ HHPTEV+A L AA+ K + VFQPH Y+RL L DDF +A ++AD VV+ V
Sbjct: 342 YGHHPTEVKATLHAAKSLDFAKVAV-VFQPHRYTRLQALCDDFVDAFADADTVVLIDVFP 400
Query: 497 VFWLIIFAVSSFWLIMAINSVICIVRSMLPEKQM 530
+ I V+S L I R+ P+KQ+
Sbjct: 401 AGEMPIPGVTSKMLADKI-------RAAHPDKQV 427
>gi|358010568|ref|ZP_09142378.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter sp. P8-3-8]
Length = 482
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 144/429 (33%), Positives = 222/429 (51%), Gaps = 49/429 (11%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG+G+ +A++ QG++VSGSD+ S L E G + IGH+ NI+
Sbjct: 21 RIKHIHFVGIGGAGMCGIAEVLKNQGYKVSGSDIKASKTTAKLEENGIQVFIGHAAENIK 80
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
G N +V S+AI +N+E+ A +P+ +R L +L + IAV+G+HGK+
Sbjct: 81 G------ANVLVVSTAIDPENLEVKEAIENRIPVVRRAEMLGELMRYRHGIAVAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S++ +L D T ++G + + + G + V EADE D FL L P A
Sbjct: 135 TTTSLVTCMLAEENMDPTYVIGGLLNRTGVNAAL-GASRFIVAEADESDASFLYLEPMAA 193
Query: 254 VVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
+VTN+D +H+D + D +K F +FL+++ G V+CGD R ++ +I +
Sbjct: 194 IVTNIDADHMDTYGGSFDVLKDTFVKFLQKMPFYGLAVVCGDDANIREIMPRIGR----- 248
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLA 370
++TYGF+ ND A + Q G S + + +GR
Sbjct: 249 --------------------PLVTYGFNEDNDIRAVDID---QTGMQSSFTVLRKGREPL 285
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
++++ +PG+HN+LN+LA I G S A + L F GV RRF + G
Sbjct: 286 RLTINLPGLHNILNALAAI-------GIATDEGVSDAAIARALEGFSGVGRRFQVQGEFE 338
Query: 431 ----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
+ DD+ HHP EV A ++AAR P++ L+ +FQPH YSR DDF + LS+
Sbjct: 339 LGEGNVKLVDDYGHHPKEVEATIKAARASHPDRRLVMMFQPHRYSRTRDCFDDFVDVLSQ 398
Query: 487 ADQVVVSAV 495
DQ+++ V
Sbjct: 399 VDQLLLLEV 407
>gi|78484929|ref|YP_390854.1| UDP-N-acetylmuramate--L-alanine ligase [Thiomicrospira crunogena
XCL-2]
gi|109892753|sp|Q31I43.1|MURC_THICR RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|78363215|gb|ABB41180.1| UDP-N-acetylmuramate--L-alanine ligase [Thiomicrospira crunogena
XCL-2]
Length = 461
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 151/428 (35%), Positives = 224/428 (52%), Gaps = 47/428 (10%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K++ IHFVGIGG G++ +A++ L GF VSGSDL + + L+ GA + H S
Sbjct: 1 MKDQVKQIHFVGIGGVGMAGIAEVCLNLGFTVSGSDLKENPTVRHLISLGALIQFNHDAS 60
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
+++ +D VV S+AI +DN E+ AK +P+ R LA+L IA++G+H
Sbjct: 61 HVKNSD------VVVVSTAIAKDNPEVCFAKESRIPVIPRAAMLAELMRMRFGIAIAGTH 114
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S+ + +L G D T ++G + QF D + G + + EADE D FL LSP
Sbjct: 115 GKTTTTSLASAILTEGGLDPTFVIGGKLNQF-DSNARLGSSQYLIAEADESDASFLHLSP 173
Query: 251 SVAVVTNLDWEHVDIFEDEDA-VKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
++VVTN+D +H++ ++ + A ++ F F+ ++ G ++C D Q +++L ++ +
Sbjct: 174 MMSVVTNIDEDHMETYQGDYANLEQTFIEFIHRLPFYGVAIVCIDDQNIQNMLPKLSR-- 231
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR-P 368
KI TYGFS D A V QG S + + P
Sbjct: 232 -----------------------KIRTYGFSESADIRATEVLH--QGLSMHFNVKANDLP 266
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
+ L PG HNVLN+LA I L L SI ++ L+ F GV RRF++ +
Sbjct: 267 EFSVVLNQPGKHNVLNALAAITVALEL-------DVSIESIQKALAGFGGVGRRFEVYPS 319
Query: 429 IYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANAL 484
H + DD+ HHPTE+ A L AR FP K L+ VFQPH YSR L D+F AL
Sbjct: 320 RSIGHKNVTLVDDYGHHPTELEATLSTARMAFPEKRLVLVFQPHRYSRTRDLFDEFVQAL 379
Query: 485 SEADQVVV 492
AD +V+
Sbjct: 380 QHADLLVL 387
>gi|403389229|ref|ZP_10931286.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium sp. JC122]
Length = 460
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 140/424 (33%), Positives = 229/424 (54%), Gaps = 42/424 (9%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
N+ IHF+GIGG +S LA++ +K ++VSGSD S E L + GA + IGH+ SN+
Sbjct: 8 NKNMTIHFIGIGGVSMSGLAEILIKNEYKVSGSDRSQSYITEKLEKLGAKIFIGHNSSNL 67
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHG 191
G D VV ++AI +DN E++ AK+ G+ + R +L L + + +A+SG+HG
Sbjct: 68 DGVD------LVVYTAAIAEDNPELIRAKNDGIKMLNRAEFLGLLMKGHKYGVAISGTHG 121
Query: 192 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPS 251
K+TT SM+A+V D T +VG + +G++ G + F+ EA EY FL P
Sbjct: 122 KTTTTSMMAHVGLKENIDPTVLVGGKLDAI-EGNVRVGESEYFITEACEYKESFLNFYPY 180
Query: 252 VAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
V V+ N++ +H+D + D + VK F++F+ I G++V+ D + A ++ K +
Sbjct: 181 VGVILNVEADHLDYYRDLNHVKEAFKKFVAIIPDDGYVVVNADDKNAIDVIKDAKCN--- 237
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQ 371
++++G + ++ A+++ N G + + + L
Sbjct: 238 ----------------------VMSFGIEN-GEYRAKNIKYNDLGCGIFDVYKNEEKLFS 274
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG 431
I L +PG HNVLN+++VI + L L S ESI L F G RRF+ G G
Sbjct: 275 IELNVPGKHNVLNAMSVICSSLAL----NISKESIV---EGLFNFRGTHRRFEFKGCKNG 327
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
++ DD+AHHPTE+RA L+A + +P+K + +FQPHTY+R + L DDF N ++
Sbjct: 328 INVVDDYAHHPTEIRATLEAVKN-YPHKDVFVIFQPHTYTRTITLFDDFVNCFKGTKNLI 386
Query: 492 VSAV 495
++ +
Sbjct: 387 LADI 390
>gi|348169469|ref|ZP_08876363.1| UDP-N-acetylmuramate--L-alanine ligase [Saccharopolyspora spinosa
NRRL 18395]
Length = 479
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 150/423 (35%), Positives = 217/423 (51%), Gaps = 32/423 (7%)
Query: 70 DFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSV 129
DF +H VGIGG+G+S +A++ L +G +VSGSD S + L GA++ IGH
Sbjct: 8 DFDAVLARVHLVGIGGAGMSGIARILLARGQQVSGSDARDSRTVLALRAQGAHIGIGHQA 67
Query: 130 SNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGS 189
N+ D P AVV S+AI DN E++ A+ G+ + +R LA L + + V+G+
Sbjct: 68 ENLDQFDAD--PTAVVVSTAIKLDNAELVEAQRRGITVLRRAEALAALMAGHRVACVAGT 125
Query: 190 HGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLS 249
HGK++T SML L+ D + +G + + + +G G FV EADE DG FL +
Sbjct: 126 HGKTSTTSMLTVALQHCRFDPSFAIGGDLNE-SGANAHHGDGSIFVAEADESDGSFLVFA 184
Query: 250 PSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
PSVAVVTN++ +H+D +A ++F F+++I GG L+ C D A L D+ ++
Sbjct: 185 PSVAVVTNVEPDHLDHHGTAEAYFAVFDEFVRRIEPGGVLIACADDPGAVELADRAEK-- 242
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPL 369
SG ++ YG S D A V + GS + G
Sbjct: 243 ----SG----------------VRVRRYGKSVTGDADARLVGYQPEHGSGVATVQLGGKT 282
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
+ + +PG H N++A + L L + L L+ F GV RRF+ G
Sbjct: 283 IDVQVSVPGEHMAGNAVAALLAGLEL-------GAPLDGLLDGLAAFGGVRRRFEFKGRA 335
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
G +YDD+AHHPTEV A L+AAR + LI VFQPH +SR +FA AL AD+
Sbjct: 336 DGVRVYDDYAHHPTEVEAQLRAARPVVGDGRLIVVFQPHLFSRTAAFASEFATALGLADE 395
Query: 490 VVV 492
VVV
Sbjct: 396 VVV 398
>gi|376263015|ref|YP_005149735.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium sp. BNL1100]
gi|373947009|gb|AEY67930.1| UDP-N-acetylmuramate--alanine ligase [Clostridium sp. BNL1100]
Length = 467
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 147/420 (35%), Positives = 226/420 (53%), Gaps = 42/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGGS +S LA++ L +G+ VSGSD+ S+ + L GA + IGH NI
Sbjct: 16 VHFIGIGGSSMSGLAEILLAKGYHVSGSDIKSSNATQKLEGKGAEIFIGHRAENIAE--- 72
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTTA 196
P+ V + A+ +DN E++ +K +G+P+ R L L +K++ IAV+G+HGK+TT
Sbjct: 73 ---PDLTVYTVAVKEDNPEMIRSKELGIPVIDRAELLGLLMKKHSFGIAVAGTHGKTTTT 129
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM+ ++ D TA +G + G+ G + F+ EA EY G FL P +AVV
Sbjct: 130 SMITTIMLESNTDPTAHIGGELDCIG-GNTRIGASEFFITEACEYYGSFLKFHPFMAVVL 188
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +HVD F D + +KS F F+ + G++V C D + S++ +
Sbjct: 189 NIEVDHVDYFRDLEHIKSTFGEFVALVPRNGYIVACADDENTLSVVSK------------ 236
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFND-WYAESVCPNVQGGSDYILCERGRPLAQISLQ 375
D IITYG + + W A+ + N G + + + + G + ISL
Sbjct: 237 -------------SDCNIITYGLKNADAMWTAKDITYNSMGCASFEVSKEGIKMGDISLS 283
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
+PG HNV NSLA IA T + E+IA LS+F G +RF+L G + +
Sbjct: 284 VPGPHNVSNSLAAIAAAYTC----GCNMENIA---YGLSRFGGSHKRFELKGLVDNIKVI 336
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHP+EV+A L AA+ NK + VFQPHTY+R D F+ + EAD ++++ +
Sbjct: 337 DDYAHHPSEVQATLNAAKSSEHNK-IWCVFQPHTYTRTRAFLDKFSESFDEADNIIITDI 395
>gi|291561835|emb|CBL40635.1| UDP-N-acetylmuramate--L-alanine ligase [butyrate-producing
bacterium SS3/4]
Length = 460
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 152/429 (35%), Positives = 224/429 (52%), Gaps = 42/429 (9%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DF N+ IHF+GIGG +S LA++ L++GF V+GSD S + L GA + G
Sbjct: 4 IDF-NKPEHIHFIGIGGISMSGLAEILLERGFTVTGSDAHESELTDKLTVHGAKIVYGQR 62
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVS 187
NI + +AVV ++A+ DN E A + +PI R L +L + Y IAVS
Sbjct: 63 AENITDD-----IDAVVYTAAVHPDNPEYAAAAAKNLPILSRAELLGQLMKNYEKSIAVS 117
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT SML +L + T VG + G+I GG + FV EA EY FL
Sbjct: 118 GTHGKTTTTSMLTEILMDEKKNPTISVGGMLDSI-GGNIRVGGPELFVTEACEYTNSFLS 176
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P++ ++ N++ +H+D F+D + ++ FR+F + + G L+I D + + + D
Sbjct: 177 FFPNMEIILNIEADHLDFFKDIEDIRHSFRKFAELLPANGVLIINSDIRDYKEICD---- 232
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWY-AESVCPNVQGGSDYILCERG 366
G K+IT G Y A V N + Y L E G
Sbjct: 233 ---------------------GLPIKVITVGSDPAKSHYSAADVTFNENACATYTLLEDG 271
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
+ + I+L +PG+HNV NSLA IA L G + + ++ L +F G RRF+
Sbjct: 272 KAIDTITLGVPGIHNVYNSLASIAAAHEL-GIRGEG------IRNGLLRFTGTHRRFEKK 324
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G I G + DD+AHHP E+ A L AA+ +P++ + VFQPHTY+R L +DFA ALS
Sbjct: 325 GMIGGVTVIDDYAHHPQEIAATLAAAKN-YPHREIWCVFQPHTYTRTKALMEDFAKALSA 383
Query: 487 ADQVVVSAV 495
AD VV++ +
Sbjct: 384 ADHVVLADI 392
>gi|296140341|ref|YP_003647584.1| UDP-N-acetylmuramate--L-alanine ligase [Tsukamurella paurometabola
DSM 20162]
gi|296028475|gb|ADG79245.1| UDP-N-acetylmuramate/alanine ligase [Tsukamurella paurometabola DSM
20162]
Length = 495
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 154/438 (35%), Positives = 223/438 (50%), Gaps = 46/438 (10%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
R +H VGIGG+G+S +A++ L +G +VSGSD S + L GA + +GHS
Sbjct: 8 LPERLRRVHMVGIGGAGMSGIARILLARGGQVSGSDAKESRGVVALRARGAQVQVGHSAD 67
Query: 131 NIQGNDGSRFPNAVVAS-SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGS 189
+ G P VV + +AIP+DN E++ A G+P+ R LA L E Y + VSG+
Sbjct: 68 ALDLLPGG--PTVVVTTHAAIPKDNPELVEAHRRGIPVILRPEVLADLMEGYRTLLVSGT 125
Query: 190 HGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLS 249
HGK++T SM L+ G + + VG + + + F+G G FV EADE DG L S
Sbjct: 126 HGKTSTTSMAVVGLQHCGGNPSFAVGGELNESGTNA-FHGTGDVFVAEADESDGSLLQYS 184
Query: 250 PSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
P V VVTN++ +H+D F E+ ++F F ++IR GG LV+C D + +L
Sbjct: 185 PDVVVVTNVEADHLDFFGSEEKYVAVFDAFTERIRPGGTLVVCLDDPGSAAL-------- 236
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVC--------PNVQGGSDYI 361
Q + + ++ YG + D + P +GG +
Sbjct: 237 ----------GQRTHAALRARGVRVFGYGEGTHRDLAPDVTLIAELLDYKPRAEGGMLKV 286
Query: 362 -LCERGRPLAQ--ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
+ R + + I L +PG H LN++A V+ L + + IA ++ F G
Sbjct: 287 RFSDENRQVTERAIMLSVPGKHMALNAIAATIAVVNL---GYPTAKVIAGIE----SFGG 339
Query: 419 VSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQA-----ARQRFPNKALIAVFQPHTYSRL 473
V RRF L GT G ++DD+AHHPTEVRAVL A A+Q P + ++A FQPH YSR
Sbjct: 340 VHRRFQLRGTEDGVRVFDDYAHHPTEVRAVLTAAAEMVAKQAVPGRVIVA-FQPHLYSRT 398
Query: 474 VVLKDDFANALSEADQVV 491
+FA ALS AD VV
Sbjct: 399 EQFAAEFAEALSLADHVV 416
>gi|416083721|ref|ZP_11586889.1| UDP-N-acetylmuramate--alanine ligase [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
gi|348010532|gb|EGY50569.1| UDP-N-acetylmuramate--alanine ligase [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
Length = 497
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 145/438 (33%), Positives = 220/438 (50%), Gaps = 61/438 (13%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+ R IHF+GIGG+G+ +A++ L +G+ +SGSD+ S+ + L +AGA + IGH
Sbjct: 32 IIPEMRRVKQIHFIGIGGAGMCGIAEILLNEGYSISGSDIAESAVTQCLTKAGAKVFIGH 91
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
NI G + VV SSAI DN E++ AK +P+ +R LA+L + IAV+
Sbjct: 92 QAENIVG------ASVVVISSAIHGDNPEVMAAKEARIPVIQRAQMLAELMRFRHGIAVA 145
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEAD 239
G+HGK+TT +M++ + G D P F +G + G N + EAD
Sbjct: 146 GTHGKTTTTAMVSMIYAEAGLD---------PTFVNGGLVKSAGTNAHLGCSRYLIAEAD 196
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCA 298
E D FL L P +++VTN++ +H+D + D D +K + FL + G V+C D +
Sbjct: 197 ESDASFLHLQPMISIVTNIEPDHMDTYHGDFDEMKQTYVNFLHNLPFYGLAVLCADDEVL 256
Query: 299 RSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS 358
L+ + + ++ITYGFS D+ E G
Sbjct: 257 MELVPLVGR-------------------------QVITYGFSENADYRIEDYQQTGFQGH 291
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
++C G + + L +PG HN LN+ A L+ K + ++ A L L+ F G
Sbjct: 292 YTVICPNGERI-DVLLNVPGRHNALNATA------ALVVAKEEGIKNDAILA-ALADFQG 343
Query: 419 VSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
RRFD +G + DD+ HHPTEV +QAARQ + NK ++ +FQPH YSR
Sbjct: 344 AGRRFDQLGQFIRPNGKVMLVDDYGHHPTEVGVTIQAARQGWENKRIVMIFQPHRYSRTR 403
Query: 475 VLKDDFANALSEADQVVV 492
L DDF LS+ D +++
Sbjct: 404 DLFDDFVQVLSQVDALIM 421
>gi|399050810|ref|ZP_10740854.1| UDP-N-acetylmuramate--alanine ligase [Brevibacillus sp. CF112]
gi|433542075|ref|ZP_20498509.1| UDP-N-acetylmuramate--L-alanine ligase [Brevibacillus agri
BAB-2500]
gi|398051526|gb|EJL43848.1| UDP-N-acetylmuramate--alanine ligase [Brevibacillus sp. CF112]
gi|432186590|gb|ELK44057.1| UDP-N-acetylmuramate--L-alanine ligase [Brevibacillus agri
BAB-2500]
Length = 460
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 142/423 (33%), Positives = 232/423 (54%), Gaps = 47/423 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HFVGIGG G+SA+A++ + G++V+GSD+ + + L GA +HIGH+ ++++G D
Sbjct: 7 VHFVGIGGYGMSAIARVLIDLGYKVTGSDVAMNELAKKLEARGAVVHIGHNAAHVEGAD- 65
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V S++IP+DN E++ A++ G+P+ R LA++ + +AV+G+HGK+TT S
Sbjct: 66 -----IIVYSTSIPKDNPEVVAAEAKGIPVMHRSQMLARILNERTGVAVAGAHGKTTTTS 120
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVT 256
M+++VL+ G D T I+G + G+ G +FV+ EADE DG FL P +VT
Sbjct: 121 MISHVLEECGVDPTFIIGGEL--MNAGTNAKAGTSDFVIAEADESDGSFLEYRPMYEIVT 178
Query: 257 NLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
+++ +H++ F+ D + +K + +FL ++ GG ++C D R ++ + +G
Sbjct: 179 SIEPDHLEHFDGDFNNLKQAYVQFLSHLKPGGKAILCIDDSHVREVMPSV--------AG 230
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE---RGRPLAQI 372
VV TY AE +++ G C+ + L +
Sbjct: 231 TVV-----------------TYAIDPAFVSQAEFRAVSIECGDRRSTCQVYHGEKLLGTL 273
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC 432
+L +PG HN+ N+LA I L D S E IA L+ F G RRF +IG
Sbjct: 274 ALTVPGKHNIANALAAIIVCL----DAGLSFEQIA---EALTSFRGAKRRFQIIGEARDI 326
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+ DD+AHHPTE+ A L A+ + +IAVFQP Y+R L D+F+ A S+AD+V+V
Sbjct: 327 LVVDDYAHHPTEIIATLNGAKA--SGRRVIAVFQPQRYTRTYFLMDEFSRAFSQADEVIV 384
Query: 493 SAV 495
+ +
Sbjct: 385 TDI 387
>gi|225378135|ref|ZP_03755356.1| hypothetical protein ROSEINA2194_03795 [Roseburia inulinivorans DSM
16841]
gi|225210016|gb|EEG92370.1| hypothetical protein ROSEINA2194_03795 [Roseburia inulinivorans DSM
16841]
Length = 459
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 147/420 (35%), Positives = 222/420 (52%), Gaps = 42/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI-QGND 136
IHF+GIGG +S LA++ ++ F +SGSD S L G + G SNI +G D
Sbjct: 12 IHFIGIGGISMSGLAEILFEEHFTISGSDSKESELTRHLEHMGMQIFYGQKASNIIEGID 71
Query: 137 GSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKSTT 195
+V ++AI +DN E AK G+P+ R L ++ + Y N IAVSG+HGK+TT
Sbjct: 72 ------LIVYTAAIREDNPEFAAAKEKGIPMLSRAELLGQIMDNYQNSIAVSGTHGKTTT 125
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM++ +L A D T VG + + DG++ G F+ EA EY FL P +++
Sbjct: 126 TSMISQILLAAKKDPTITVGG-ILKAIDGNLRVGKSDVFISEACEYTNSFLNFRPKYSII 184
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
N++ EH+D F+D +++ F F K + G ++I G+ + + ++
Sbjct: 185 LNIEAEHLDFFKDIHDIRNSFHLFAKNTKENGAIIINGEIENYQEIV------------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQ 375
+G ++ITYG S D+Y + N + +++ G + ++L
Sbjct: 232 ------------EGLAPQVITYGMSDACDFYPADITFNEKACANFTAMYHGEKVMDVALN 279
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
+PG+HNV N+LA IA L + S E I LS F G RRF G + G +
Sbjct: 280 VPGLHNVSNALAAIALALD----LKISKEDILA---GLSAFGGADRRFQYKGCVDGVTVI 332
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHPTE+RA L AA+ ++P+K L+ VFQPHTYSR +DFA LS AD VV++ +
Sbjct: 333 DDYAHHPTEIRATLTAAK-KYPHKRLVLVFQPHTYSRTKAFLNDFAEVLSMADVVVLADI 391
>gi|339489240|ref|YP_004703768.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas putida S16]
gi|431804310|ref|YP_007231213.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas putida HB3267]
gi|338840083|gb|AEJ14888.1| UDP-N-acetylmuramate-L-alanine ligase [Pseudomonas putida S16]
gi|430795075|gb|AGA75270.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas putida HB3267]
Length = 482
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 154/423 (36%), Positives = 219/423 (51%), Gaps = 45/423 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G+EVSGSDL S E L GA + +GH N D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKASPVTERLESFGAEIFVGHRAENAATAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSAI N E+ A +P+ R LA+L + +AV+G+HGK+TT S
Sbjct: 78 -----VLVVSSAINPANPEVATALERRIPVVPRAEMLAELMRYRHGVAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+LA V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LLASVFAAGGLDPTFVIGGRLTAAGTNAQL-GTSRYLIAEADESDASFLHLQPMVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ +E D + +K F FL + G V+C D R +L Q+K+ T
Sbjct: 192 IDADHMATYEGDFNKLKKTFVEFLHNLPFYGLAVMCLDDPVVREILPQVKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+TYGFS D A +V + + + + R R ++S+ +
Sbjct: 245 ------------------VTYGFSDEADIRAINVR-QMGMQTHFTVLRRDREPLEVSVNM 285
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----GC 432
PG HNVLN+LA IA + D+ + E+I LS F GV RRF + G +
Sbjct: 286 PGNHNVLNALATIA----IATDEGITDEAIVQ---GLSGFQGVGRRFQVYGELPVEGGSV 338
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+ DD+ HHPTEV AV+QA R +P++ L+ V+QPH YSR L DDF L +A+ +++
Sbjct: 339 MLVDDYGHHPTEVAAVIQAVRGGWPSRRLVIVYQPHRYSRTRDLYDDFVQVLGDANVLLL 398
Query: 493 SAV 495
V
Sbjct: 399 MEV 401
>gi|419718524|ref|ZP_14245841.1| UDP-N-acetylmuramate--L-alanine ligase [Lachnoanaerobaculum
saburreum F0468]
gi|383305359|gb|EIC96727.1| UDP-N-acetylmuramate--L-alanine ligase [Lachnoanaerobaculum
saburreum F0468]
Length = 458
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 140/420 (33%), Positives = 225/420 (53%), Gaps = 43/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
I+F GIGG +S LA++ L++GF+VSGSD S+ + L G + IG + +NI +
Sbjct: 12 IYFCGIGGISMSGLARVLLEKGFKVSGSDTKASNRTKDLENRGIKVFIGQNKNNISDD-- 69
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTTA 196
+ V ++AI +DN E + AK + + R L + K+ IA+SG+HGK+TT
Sbjct: 70 ---TDLFVYTAAIHKDNPEFVTAKEKNIKVMTRAQLLGYVMSKFKESIAISGTHGKTTTT 126
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SML+Y+L D T VG V + G+++ G G FV EA EY FL L P+V V+
Sbjct: 127 SMLSYILLDTNLDPTISVGGIVKKIK-GNVYIGNGDTFVTEACEYTNSFLELYPTVGVIL 185
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F+D D ++ F++F+K G ++I D+IK + +
Sbjct: 186 NIEEDHLDFFKDLDDIRDSFKKFVKNTSREGCIIIN----------DKIKNNREIT---- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
G++ ++ YG + +D YA ++ + G + L + + L +
Sbjct: 232 -----------MGYEGNVVRYGTEN-SDCYAANIRYDAVGYPTFDLVHKEETYEDVKLCV 279
Query: 377 PGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
G HN+ N+LA + L +G I ++ L +F GV RRF++ G + G I
Sbjct: 280 GGNHNIYNALAAVCVAFELGVG--------IEDIRRGLLEFKGVDRRFEIKGKLDGITIV 331
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHP+E+ A L A+ R+P+ L+ VFQPHTY+R L +DFAN L +QV+++ +
Sbjct: 332 DDYAHHPSEISATLNIAK-RYPHDRLVVVFQPHTYTRTKALFEDFANVLKNVEQVIIAKI 390
>gi|421531163|ref|ZP_15977593.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas putida S11]
gi|402211388|gb|EJT82855.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas putida S11]
Length = 482
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 154/423 (36%), Positives = 219/423 (51%), Gaps = 45/423 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G+EVSGSDL S E L GA + +GH N D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKASPVTERLESFGAEIFVGHRAENAATAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSAI N E+ A +P+ R LA+L + +AV+G+HGK+TT S
Sbjct: 78 -----VLVVSSAINPANPEVATALERRIPVVPRAEMLAELMRYRHGVAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+LA V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LLASVFAAGGLDPTFVIGGRLTAAGTNAQL-GTSRYLIAEADESDASFLHLQPMVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ +E D + +K F FL + G V+C D R +L Q+K+ T
Sbjct: 192 IDADHMATYEGDFNKLKKTFVEFLHNLPFYGLAVMCLDDPVVREILPQVKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+TYGFS D A +V + + + + R R ++S+ +
Sbjct: 245 ------------------VTYGFSDEADVRAINVR-QMGMQTHFTVLRRDREPLEVSVNM 285
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----GC 432
PG HNVLN+LA IA + D+ + E+I LS F GV RRF + G +
Sbjct: 286 PGNHNVLNALATIA----IATDEGITDEAIVQ---GLSGFQGVGRRFQVYGELPVEGGSV 338
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+ DD+ HHPTEV AV+QA R +P++ L+ V+QPH YSR L DDF L +A+ +++
Sbjct: 339 MLVDDYGHHPTEVAAVIQAVRGGWPSRRLVIVYQPHRYSRTRDLYDDFVQVLGDANVLLL 398
Query: 493 SAV 495
V
Sbjct: 399 MEV 401
>gi|429765485|ref|ZP_19297777.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium celatum DSM
1785]
gi|429186304|gb|EKY27255.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium celatum DSM
1785]
Length = 458
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 145/423 (34%), Positives = 222/423 (52%), Gaps = 46/423 (10%)
Query: 72 KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSN 131
KN+K +HF+GIGG +S LA + L +G+ VSGSD S ++ L ++GA ++IGH N
Sbjct: 9 KNKK--VHFIGIGGVSMSGLAAVLLTKGYNVSGSDAKESEVLDKLRKSGAEIYIGHKSEN 66
Query: 132 IQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAVSGS 189
++ D VV ++AIP N EI+ AK+ + + R +L + + KYN +AV+G+
Sbjct: 67 LKNVD------LVVYTAAIPDSNPEIIEAKNKNIELMDRAEFLGYIMKGHKYN-VAVAGT 119
Query: 190 HGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLS 249
HGK+TT SML+++ + D T +VG V G+ G + FV EA EY FL
Sbjct: 120 HGKTTTTSMLSHITLSANLDPTILVGGDVDAIH-GNYKIGESEYFVTEACEYKASFLKFY 178
Query: 250 PSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
P + +V N+D +H+D + D + +K F++F I G+LV C + +++ K
Sbjct: 179 PYIGIVLNIDADHLDYYRDLNHIKETFKKFSDLIPEDGYLVGCAEDANVLEVINYAKC-- 236
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPL 369
K I+YGF+ D A ++ N +G + + +C+ G L
Sbjct: 237 -----------------------KTISYGFTK-GDVTASNISFNNKGCATFTVCKHGEKL 272
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
++L G HN+LN+LA I T L L ESI L++ G +RF+ G
Sbjct: 273 FDVTLSTTGKHNILNALATICTSLIL----NIPKESII---KGLAECKGAHKRFEYKGEF 325
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
G I DD+AHHP E++A L A+ NK VFQPHTY+R L D+F S AD+
Sbjct: 326 NGATIIDDYAHHPVEIKATLSTAKLIEHNKTY-CVFQPHTYTRTKTLFDEFTTCFSSADE 384
Query: 490 VVV 492
+++
Sbjct: 385 LIL 387
>gi|416073896|ref|ZP_11584359.1| UDP-N-acetylmuramate--alanine ligase [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|444338038|ref|ZP_21151924.1| UDP-N-acetylmuramate--alanine ligase [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
gi|348007117|gb|EGY47459.1| UDP-N-acetylmuramate--alanine ligase [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|443545842|gb|ELT55584.1| UDP-N-acetylmuramate--alanine ligase [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
Length = 476
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 145/438 (33%), Positives = 220/438 (50%), Gaps = 61/438 (13%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+ R IHF+GIGG+G+ +A++ L +G+ +SGSD+ S+ + L +AGA + IGH
Sbjct: 11 IIPEMRRVKQIHFIGIGGAGMCGIAEILLNEGYSISGSDIAESAVTQCLTKAGAKVFIGH 70
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
NI G + VV SSAI DN E++ AK +P+ +R LA+L + IAV+
Sbjct: 71 QAENIVG------ASVVVISSAIHGDNPEVMAAKEARIPVIQRAQMLAELMRFRHGIAVA 124
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEAD 239
G+HGK+TT +M++ + G D P F +G + G N + EAD
Sbjct: 125 GTHGKTTTTAMVSMIYAEAGLD---------PTFVNGGLVKSAGTNAHLGCSRYLIAEAD 175
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCA 298
E D FL L P +++VTN++ +H+D + D D +K + FL + G V+C D +
Sbjct: 176 ESDASFLHLQPMISIVTNIEPDHMDTYHGDFDEMKQTYVNFLHNLPFYGLAVLCADDEVL 235
Query: 299 RSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS 358
L+ + + ++ITYGFS D+ E G
Sbjct: 236 MELVPLVGR-------------------------QVITYGFSENADYRIEDYQQTGFQGH 270
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
++C G + + L +PG HN LN+ A L+ K + ++ A L L+ F G
Sbjct: 271 YTVICPNGERI-DVLLNVPGRHNALNATA------ALVVAKEEGIKNDAILA-ALADFQG 322
Query: 419 VSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
RRFD +G + DD+ HHPTEV +QAARQ + NK ++ +FQPH YSR
Sbjct: 323 AGRRFDQLGQFIRPNGKVMLVDDYGHHPTEVGVTIQAARQGWENKRIVMIFQPHRYSRTR 382
Query: 475 VLKDDFANALSEADQVVV 492
L DDF LS+ D +++
Sbjct: 383 DLFDDFVQVLSQVDALIM 400
>gi|210616990|ref|ZP_03291325.1| hypothetical protein CLONEX_03547 [Clostridium nexile DSM 1787]
gi|210149513|gb|EEA80522.1| hypothetical protein CLONEX_03547 [Clostridium nexile DSM 1787]
Length = 458
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 153/424 (36%), Positives = 219/424 (51%), Gaps = 40/424 (9%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
N+ +HF+GIGG +S LA++ LK+ F +SGSD S+ E L GA++ SNI
Sbjct: 7 NKPLHVHFIGIGGISMSGLAEILLKENFTISGSDSKASALTEHLASMGASVFYPQKASNI 66
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHG 191
DG + VV ++AI +DN E AK +P+ R L +L Y IAVSG+HG
Sbjct: 67 I--DGI---DVVVYTAAIHEDNEEFAEAKRQNLPMLSRAELLGQLMTNYKTPIAVSGTHG 121
Query: 192 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPS 251
K+TT SML++VL A D T VG + + G+I G FV EA EY FL P
Sbjct: 122 KTTTTSMLSHVLLAGEKDPTISVGG-ILKAIGGNIRVGSSDVFVTEACEYTNSFLHFFPK 180
Query: 252 VAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
+ ++ N++ +H+D F+D D +++ F +F + G LVI + + S+ D
Sbjct: 181 IGIILNVEEDHMDFFKDIDDIRNSFHQFAALLPADGALVINQNIEGINSITD-------- 232
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQ 371
G D KIITY D+ A + + G + + L G + +
Sbjct: 233 -----------------GLDCKIITYSERQPADYSASEIRFDEIGNASFDLLRHGEYVDR 275
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG 431
I+L + G HNV N+LAVIA Q + +K + F G RRF G G
Sbjct: 276 ITLAVAGNHNVSNALAVIAVC-------EQLEIPLDIIKKGILSFTGTDRRFQYKGERDG 328
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
I DD+AHHPTE+RA L +A Q +P+K + +FQPHTY+R D+FA ALS AD VV
Sbjct: 329 VTIIDDYAHHPTEIRATLTSA-QNYPHKDIWCIFQPHTYTRTKAFFDEFAEALSLADHVV 387
Query: 492 VSAV 495
++ +
Sbjct: 388 LADI 391
>gi|26988072|ref|NP_743497.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas putida KT2440]
gi|386013730|ref|YP_005932007.1| protein MurC [Pseudomonas putida BIRD-1]
gi|37999638|sp|Q88N75.1|MURC_PSEPK RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|24982796|gb|AAN66961.1|AE016324_11 UDP-N-acetylmuramate--alanine ligase [Pseudomonas putida KT2440]
gi|313500436|gb|ADR61802.1| MurC [Pseudomonas putida BIRD-1]
Length = 482
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 155/424 (36%), Positives = 220/424 (51%), Gaps = 47/424 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G+EVSGSDL S E L GA + +GH N D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKASPVTERLESFGAEIFVGHRAENAATAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSAI N E+ A +P+ R LA+L + +AV+G+HGK+TT S
Sbjct: 78 -----VLVVSSAINPANPEVATALERRIPVVPRAEMLAELMRYRHGVAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+LA V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LLASVFAAGGLDPTFVIGGRLTAAGTNAQL-GTSRYLIAEADESDASFLHLQPMVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ +E D + +K F FL + G V+C D R +L Q+K+ T
Sbjct: 192 IDADHMATYEGDFNKLKKTFVEFLHNLPFYGLAVMCLDDPVVREILPQVKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPLAQISLQ 375
+TYGFS D A +V QG + + + R R ++S+
Sbjct: 245 ------------------VTYGFSEEADIRAINV--RQQGMQTHFTVLRRDREPLEVSVN 284
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----G 431
+PG HNVLN+LA IA + D+ + E+I LS F GV RRF + G +
Sbjct: 285 MPGNHNVLNALATIA----IATDEGITDEAIVQ---GLSGFQGVGRRFQVYGELPVEGGS 337
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+ HHPTEV AV++A R +P++ L+ V+QPH YSR L DDF L +A+ ++
Sbjct: 338 VMLVDDYGHHPTEVAAVIKAVRGGWPSRRLVIVYQPHRYSRTRDLYDDFVQVLGDANVLL 397
Query: 492 VSAV 495
+ V
Sbjct: 398 LMEV 401
>gi|261867481|ref|YP_003255403.1| UDP-N-acetylmuramate--L-alanine ligase [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|365967279|ref|YP_004948841.1| UDP-N-acetylmuramate--L-alanine ligase [Aggregatibacter
actinomycetemcomitans ANH9381]
gi|415769375|ref|ZP_11484163.1| UDP-N-acetylmuramate--alanine ligase [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|416103048|ref|ZP_11589103.1| UDP-N-acetylmuramate--alanine ligase [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|444345343|ref|ZP_21153364.1| UDP-N-acetylmuramate--alanine ligase [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
gi|444347761|ref|ZP_21155584.1| UDP-N-acetylmuramate--alanine ligase [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
gi|261412813|gb|ACX82184.1| UDP-N-acetylmuramate--alanine ligase [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|348008319|gb|EGY48595.1| UDP-N-acetylmuramate--alanine ligase [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|348657482|gb|EGY75071.1| UDP-N-acetylmuramate--alanine ligase [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|365746192|gb|AEW77097.1| UDP-N-acetylmuramate--L-alanine ligase [Aggregatibacter
actinomycetemcomitans ANH9381]
gi|443543100|gb|ELT53367.1| UDP-N-acetylmuramate--alanine ligase [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
gi|443548232|gb|ELT57528.1| UDP-N-acetylmuramate--alanine ligase [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
Length = 476
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 145/438 (33%), Positives = 220/438 (50%), Gaps = 61/438 (13%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+ R IHF+GIGG+G+ +A++ L +G+ +SGSD+ S+ + L +AGA + IGH
Sbjct: 11 IIPEMRRVKQIHFIGIGGAGMCGIAEILLNEGYSISGSDIAESAVTQCLTKAGAKVFIGH 70
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
NI G + VV SSAI DN E++ AK +P+ +R LA+L + IAV+
Sbjct: 71 QAENIVG------ASVVVISSAIHGDNPEVMAAKEARIPVIQRAQMLAELMRFRHGIAVA 124
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEAD 239
G+HGK+TT +M++ + G D P F +G + G N + EAD
Sbjct: 125 GTHGKTTTTAMVSMIYAEAGLD---------PTFVNGGLVKSAGTNAHLGCSRYLIAEAD 175
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCA 298
E D FL L P +++VTN++ +H+D + D D +K + FL + G V+C D +
Sbjct: 176 ESDASFLHLQPMISIVTNIEPDHMDTYHGDFDEMKQTYVNFLHNLPFYGLAVLCADDEVL 235
Query: 299 RSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS 358
L+ + + ++ITYGFS D+ E G
Sbjct: 236 MELVPLVGR-------------------------QVITYGFSENADYRIEDYQQTGFQGH 270
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
++C G + + L +PG HN LN+ A L+ K + ++ A L L+ F G
Sbjct: 271 YTVICPNGERI-DVLLNVPGRHNALNATA------ALVVAKEEGIKNDAILA-ALADFQG 322
Query: 419 VSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
RRFD +G + DD+ HHPTEV +QAARQ + NK ++ +FQPH YSR
Sbjct: 323 AGRRFDQLGQFIRPNGKVMLVDDYGHHPTEVGVTIQAARQGWENKRIVMIFQPHRYSRTR 382
Query: 475 VLKDDFANALSEADQVVV 492
L DDF LS+ D +++
Sbjct: 383 DLFDDFVQVLSQVDALIM 400
>gi|260896399|ref|ZP_05904895.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio parahaemolyticus
Peru-466]
gi|308087557|gb|EFO37252.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio parahaemolyticus
Peru-466]
Length = 398
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 144/425 (33%), Positives = 216/425 (50%), Gaps = 61/425 (14%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHF+GIGG+G+S +A++ L +G+E++GSDL + E L+ GA + IGH SN++
Sbjct: 21 RVKCIHFIGIGGAGMSGIAEVLLNEGYEITGSDLSENPVTERLVSKGATVFIGHQASNVE 80
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
+ VV S+AI ++N E++ A+ + +PI +R LA+L + IAV+G+HGK+
Sbjct: 81 K------ASVVVVSTAINEENPEVMAARELRIPIVRRAEMLAELMRFRHGIAVAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEADEYDGCF 245
TT +++ + G D P F +G + G N + EADE D F
Sbjct: 135 TTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGSSRILIAEADESDASF 185
Query: 246 LGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 304
L L P V++VTN++ +H+D + D + +K F FL + G ++C D R L+ +
Sbjct: 186 LHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAIVCIDDPVIRELIPR 245
Query: 305 IKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE 364
I + ++ITYGFS D E+ Q G + +
Sbjct: 246 ISR-------------------------QVITYGFSDDADVRIENYHQEGQQGK-FTVVR 279
Query: 365 RGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFD 424
+GR I+L IPG HN LN+ A IA E A LK ++ G RRFD
Sbjct: 280 KGRANLDITLNIPGRHNALNASAAIAVA------TEDDIEDDAILK-AMAGTQGTGRRFD 332
Query: 425 LIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
+G + + DD+ HHPTEV ++AAR + +K L+ +FQPH YSR L DDF
Sbjct: 333 HLGEFDTGNGHAMLVDDYGHHPTEVDVTIKAARSGWQDKRLVMIFQPHRYSRTRDLYDDF 392
Query: 481 ANALS 485
A LS
Sbjct: 393 ATCLS 397
>gi|148549591|ref|YP_001269693.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas putida F1]
gi|395445250|ref|YP_006385503.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas putida ND6]
gi|397697097|ref|YP_006534980.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas putida DOT-T1E]
gi|421522848|ref|ZP_15969488.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas putida LS46]
gi|166224717|sp|A5W8P9.1|MURC_PSEP1 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|148513649|gb|ABQ80509.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas putida F1]
gi|388559247|gb|AFK68388.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas putida ND6]
gi|397333827|gb|AFO50186.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas putida DOT-T1E]
gi|402753341|gb|EJX13835.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas putida LS46]
Length = 482
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 155/424 (36%), Positives = 220/424 (51%), Gaps = 47/424 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G+EVSGSDL S E L GA + +GH N D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKASPVTERLESFGAEIFVGHRAENAATAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSAI N E+ A +P+ R LA+L + +AV+G+HGK+TT S
Sbjct: 78 -----VLVVSSAINPANPEVATALERRIPVVPRAEMLAELMRYRHGVAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+LA V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LLASVFAAGGLDPTFVIGGRLTAAGTNAQL-GTSRYLIAEADESDASFLHLQPMVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ +E D + +K F FL + G V+C D R +L Q+K+ T
Sbjct: 192 IDADHMATYEGDFNKLKKTFVEFLHNLPFYGLAVMCLDDPVVREILPQVKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPLAQISLQ 375
+TYGFS D A +V QG + + + R R ++S+
Sbjct: 245 ------------------VTYGFSEEADIRAINV--RQQGMQTHFTVLRRDREPLEVSVN 284
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----G 431
+PG HNVLN+LA IA + D+ + E+I LS F GV RRF + G +
Sbjct: 285 MPGNHNVLNALATIA----IATDEGITDEAIVQ---GLSGFQGVGRRFQVYGELPVEGGS 337
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+ HHPTEV AV++A R +P++ L+ V+QPH YSR L DDF L +A+ ++
Sbjct: 338 VMLVDDYGHHPTEVAAVIKAVRGGWPSRRLVIVYQPHRYSRTRDLYDDFVQVLGDANVLL 397
Query: 492 VSAV 495
+ V
Sbjct: 398 LMEV 401
>gi|424032005|ref|ZP_17771426.1| UDP-N-acetylmuramate--alanine ligase [Vibrio cholerae HENC-01]
gi|424042839|ref|ZP_17780507.1| UDP-N-acetylmuramate--alanine ligase [Vibrio cholerae HENC-02]
gi|408876417|gb|EKM15534.1| UDP-N-acetylmuramate--alanine ligase [Vibrio cholerae HENC-01]
gi|408886226|gb|EKM24907.1| UDP-N-acetylmuramate--alanine ligase [Vibrio cholerae HENC-02]
Length = 485
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 146/439 (33%), Positives = 224/439 (51%), Gaps = 61/439 (13%)
Query: 67 CIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG 126
+V R IHF+GIGG+G+S +A++ L +G++++GSDL + E L+ GA + IG
Sbjct: 14 AMVPEMRRVKSIHFIGIGGAGMSGIAEVLLNEGYQITGSDLSENPVTERLVSKGATVFIG 73
Query: 127 HSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAV 186
H SN++ + VV S+AI ++N E++ A+ + +PI +R LA+L + IAV
Sbjct: 74 HQASNVEK------ASVVVVSTAINEENPEVMAARELRIPIVRRAEMLAELMRFRHGIAV 127
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEA 238
+G+HGK+TT +++ + G D P F +G + G N + EA
Sbjct: 128 AGTHGKTTTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGSSRILIAEA 178
Query: 239 DEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQC 297
DE D FL L P V++VTN++ +H+D + D + +K F FL + G ++C D
Sbjct: 179 DESDASFLHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAIVCIDDPV 238
Query: 298 ARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG 357
R L+ +I + ++ITYGFS D E+ Q G
Sbjct: 239 IRELIPRISR-------------------------QVITYGFSEDADVRIENYHQEGQQG 273
Query: 358 SDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFM 417
+ + GR I+L IPG HN LN+ A IA + S E+I LK ++
Sbjct: 274 K-FTVVREGRANLDITLNIPGRHNALNASAAIAVAT----EDDISDEAI--LK-AMAGTQ 325
Query: 418 GVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRL 473
G RRFD +G + + DD+ HHPTEV + AAR + +K L+ +FQPH YSR
Sbjct: 326 GTGRRFDHLGEFDTGNGHAMLVDDYGHHPTEVDVTINAARSGWQDKRLVMIFQPHRYSRT 385
Query: 474 VVLKDDFANALSEADQVVV 492
L DDFAN L + D +++
Sbjct: 386 RDLYDDFANVLEQVDVLIM 404
>gi|323487300|ref|ZP_08092600.1| hypothetical protein HMPREF9474_04351 [Clostridium symbiosum
WAL-14163]
gi|355629312|ref|ZP_09050346.1| UDP-N-acetylmuramate-alanine ligase [Clostridium sp. 7_3_54FAA]
gi|323399345|gb|EGA91743.1| hypothetical protein HMPREF9474_04351 [Clostridium symbiosum
WAL-14163]
gi|354819212|gb|EHF03661.1| UDP-N-acetylmuramate-alanine ligase [Clostridium sp. 7_3_54FAA]
Length = 459
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 142/428 (33%), Positives = 226/428 (52%), Gaps = 41/428 (9%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DF + +HFVGIGG +S LA++ + +GF++SGSD S L GA ++ G
Sbjct: 4 IDFTKPQS-VHFVGIGGISMSGLAEILMDEGFKISGSDAHESELTRHLEAKGAVVYYGQK 62
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVS 187
NI+ DG +AVV ++AI +DN E + K G+P+ R L ++ + Y IA++
Sbjct: 63 AENIK--DGI---DAVVYTAAIHEDNPEFMEVKRRGIPMMSRAELLGQMMKNYREAIAIA 117
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT SM+ + ++ T VG + G+I GG + FV EA EY FL
Sbjct: 118 GTHGKTTTTSMVTEIFMEADNNPTISVGGILNSI-GGNIRVGGPEFFVTEACEYTNSFLS 176
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P++AV+ N++ +H+D F+D D ++ FR+F++++ G +++ G + R L
Sbjct: 177 FYPTMAVILNIEEDHLDFFKDIDDIRRSFRQFIEKVPENGTIIMNGTIENWRELT----- 231
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR 367
G K++T+G S ND+ ++V + + L +G
Sbjct: 232 --------------------AGAAGKVVTFGNSKENDYSFDAVVYDEYARPSFDLYIKGE 271
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
+ISL + G HNV N+L IA + +S + L KF G +RRF+ G
Sbjct: 272 KKERISLGVQGEHNVYNALGAIAVAM-------ESGAGLEAAGRGLLKFTGTNRRFEKKG 324
Query: 428 TIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ G I DD+AHHP E+ A L+AA + +P+K + FQPHTY+R +FA ALS A
Sbjct: 325 ELKGITIIDDYAHHPQEIEATLKAA-ENYPHKRICCAFQPHTYTRTKAFMKEFAQALSLA 383
Query: 488 DQVVVSAV 495
D V+++ +
Sbjct: 384 DCVMLTDI 391
>gi|444424606|ref|ZP_21220061.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio campbellii CAIM 519
= NBRC 15631]
gi|444242098|gb|ELU53614.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio campbellii CAIM 519
= NBRC 15631]
Length = 485
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 146/439 (33%), Positives = 223/439 (50%), Gaps = 61/439 (13%)
Query: 67 CIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG 126
+V R IHF+GIGG+G+S +A++ L +G++++GSDL + E L+ GA + IG
Sbjct: 14 AMVPEMRRVKSIHFIGIGGAGMSGIAEVLLNEGYQITGSDLSENPVTERLVSKGATVFIG 73
Query: 127 HSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAV 186
H SN++ + VV S+AI ++N E++ A+ + +PI +R LA+L + IAV
Sbjct: 74 HQASNVEK------ASVVVVSTAINEENPEVMAARELRIPIVRRAEMLAELMRFRHGIAV 127
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEA 238
+G+HGK+TT +++ + G D P F +G + G N + EA
Sbjct: 128 AGTHGKTTTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGSSRILIAEA 178
Query: 239 DEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQC 297
DE D FL L P V++VTN++ +H+D + D + +K F FL + G ++C D
Sbjct: 179 DESDASFLHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAIVCIDDPV 238
Query: 298 ARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG 357
R L+ +I + ++ITYGFS D E Q G
Sbjct: 239 IRELIPRISR-------------------------QVITYGFSEDADVRIEDYHQEGQQG 273
Query: 358 SDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFM 417
+ + GR I+L IPG HN LN+ A IA + S E+I LK ++
Sbjct: 274 K-FTVVREGRANLDITLNIPGRHNALNASAAIAVAT----EDDISDEAI--LK-AMAGTQ 325
Query: 418 GVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRL 473
G RRFD +G + + DD+ HHPTEV + AAR + +K L+ +FQPH YSR
Sbjct: 326 GTGRRFDHLGEFDTGNGHAMLVDDYGHHPTEVDVTIHAARSGWQDKRLVMIFQPHRYSRT 385
Query: 474 VVLKDDFANALSEADQVVV 492
L DDFAN L + D +++
Sbjct: 386 RDLYDDFANVLEQVDVLIM 404
>gi|398847761|ref|ZP_10604649.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM84]
gi|398251264|gb|EJN36533.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM84]
Length = 482
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 156/424 (36%), Positives = 219/424 (51%), Gaps = 47/424 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G+EVSGSDL S E L GA + +GH N D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKVSPVTERLESFGAEIFVGHRAENAANAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSAI N E+ A +P+ R LA+L + +AV+G+HGK+TT S
Sbjct: 78 -----VLVVSSAINPANPEVATALERRIPVVPRAEMLAELMRYRHGVAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+LA V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LLASVFAAGGLDPTFVIGGRLTAAGTNAQL-GTSRYLIAEADESDASFLHLQPMVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ +E D + +K F FL + G V+C D R +L Q+K+ T
Sbjct: 192 IDADHMATYEGDFNKLKKTFVEFLHNLPFYGLAVMCLDDPVVREILPQVKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPLAQISLQ 375
+TYGFS D A +V QG + + + R R +S+
Sbjct: 245 ------------------VTYGFSDEADIRAINV--RQQGMQTHFTVLRRDREPLDVSVN 284
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----G 431
+PG HNVLN+LA IA + D+ S E+I LS F GV RRF + G +
Sbjct: 285 MPGNHNVLNALATIA----IATDEGISDEAIVQ---GLSGFQGVGRRFQVYGELPVEGGS 337
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+ HHPTEV AV++A R +P++ L+ V+QPH YSR L DDF L +A+ ++
Sbjct: 338 VMLVDDYGHHPTEVAAVIKAVRGGWPSRRLVIVYQPHRYSRTRDLYDDFVQVLGDANVLL 397
Query: 492 VSAV 495
+ V
Sbjct: 398 LMEV 401
>gi|363890696|ref|ZP_09318012.1| UDP-N-acetylmuramate-alanine ligase [Eubacteriaceae bacterium CM5]
gi|361964438|gb|EHL17473.1| UDP-N-acetylmuramate-alanine ligase [Eubacteriaceae bacterium CM5]
Length = 449
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 139/419 (33%), Positives = 221/419 (52%), Gaps = 40/419 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
I F+GIGG +SALA + G++V GSD S + L ++G ++IGH+ NI +
Sbjct: 3 IFFIGIGGISMSALAVICKNVGYDVYGSDRESSEITKKLEKSGIKIYIGHNKDNITED-- 60
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKSTTA 196
+ VV ++AI +DN E++ + ++G+ +R +L L EKY N IA+SG+HGK+TT
Sbjct: 61 ---FDMVVYTAAIAKDNEELVKSYNLGINTMERANFLGHLMEKYENSIAISGTHGKTTTT 117
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SML + TA++G G+I G F+ EA EY FL P +A++T
Sbjct: 118 SMLTLIFNKANTSPTALIGGVFANIG-GNIEIGSSDIFITEACEYVDSFLQFFPKIAIIT 176
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F+D +++K F +F Q++ G ++ GD + +S L
Sbjct: 177 NIEADHLDYFKDLESIKKSFLKFSNQVKSNGLVIANGDDENVKSAL-------------- 222
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+ + KI GF ND+ ++V N +G ++ L + + SL++
Sbjct: 223 -----------KNSNSKIYYCGFDETNDFVCKNVKSNDEGYPNFDLFFKNELIENFSLKV 271
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
G HN+ N++ IA K S + +K L +F GV RRF+ IG G +YD
Sbjct: 272 YGKHNIYNAICSIAAAYLC---KINS----SVIKSALLEFTGVGRRFEYIGEKNGVKVYD 324
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHPTE++A L AA+ N+ LI++FQPHTYSR L DF + D ++ + +
Sbjct: 325 DYAHHPTEIKATLNAAKSIKKNR-LISIFQPHTYSRTKSLFKDFNTCFDDTDIIIFADI 382
>gi|291549817|emb|CBL26079.1| UDP-N-acetylmuramate--L-alanine ligase [Ruminococcus torques L2-14]
Length = 458
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 145/419 (34%), Positives = 222/419 (52%), Gaps = 40/419 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG +S LA++ L++GF VSGSD S + L GA +H G NI +DG
Sbjct: 12 IHFIGIGGISMSGLAEILLEEGFTVSGSDSKESPLTKKLESEGAIIHYGQCAENI--SDG 69
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTTA 196
+ VV ++AI + N E++ A + +P+ R L +L + Y IAVSG+HGK+TT
Sbjct: 70 I---DCVVYTAAINKANPELMEAVARKIPMLTRAELLGQLMKNYKTPIAVSGTHGKTTTT 126
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM++++L A D T VG + + G+I G + F+ EA EY FL P ++V+
Sbjct: 127 SMISHILLAADLDPTISVGG-ILKAIGGNIRVGKSETFITEACEYTNSFLHFYPKISVIL 185
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F+D + ++ F +F + G L+I GD + + D +
Sbjct: 186 NIEEDHLDFFKDLEDIRHSFHQFAALLPSDGTLIINGDIDNYQEIYDSL----------- 234
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
D +ITYG S D+ A ++ + +G + L + G+ + I L +
Sbjct: 235 --------------DCNVITYGSSDMLDYSASNITYDEKGLVAFDLIKNGKVVDHIQLSV 280
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
G HNV N+LA IAT L + +K + F G RRF+ GT G + D
Sbjct: 281 TGDHNVSNALASIATAELL-------QIPMETIKKGILSFSGTDRRFEYKGTFNGVTVVD 333
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHPTE+ A L+AA Q +P+ + VFQPHTY+R +FA ALS D +V++ +
Sbjct: 334 DYAHHPTEIAATLKAA-QHYPHNQVWCVFQPHTYTRTKAFFHEFAEALSHTDHLVLADI 391
>gi|167766034|ref|ZP_02438087.1| hypothetical protein CLOSS21_00527 [Clostridium sp. SS2/1]
gi|167712114|gb|EDS22693.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium sp. SS2/1]
Length = 463
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 151/429 (35%), Positives = 232/429 (54%), Gaps = 41/429 (9%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DF N+ IHF+GIGG +S LA++ +K+GF +SGSD+ S ++ L + GA +++ +
Sbjct: 6 IDF-NKPIHIHFMGIGGISMSGLAEILIKEGFSISGSDIHTSDIIKHLEDKGAKVYLSQT 64
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQD-NVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAV 186
NI + + VV ++AI D N E A +P+ KR L ++ Y N IAV
Sbjct: 65 ADNITDD-----IDLVVYTAAINFDTNEEYKEAIRRNIPVMKRATLLGQMMHNYQNAIAV 119
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
SG+HGK+TT SML+Y+L A D T VG + +G+I G + FV EA EY FL
Sbjct: 120 SGTHGKTTTTSMLSYILLAGNTDPTISVGG-ILDAINGNIRVGHSETFVTEACEYTNSFL 178
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 306
P ++++ N++ +H+D F+D D ++ FR F ++ G+L+I G+ + ++D +K
Sbjct: 179 EFFPKISIILNIEEDHMDFFKDLDDIRHSFREFAHKLPDYGYLIINGEIENIDYIVDGLK 238
Query: 307 QDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERG 366
+Y+ + N S D + Y +G + F+ +Y +G
Sbjct: 239 A----EYATFGLENDSYDYCAKNIGYD--AFGHAHFDYYY------------------KG 274
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
+ I L + G HNV N+LA IA + D + +K L F G RRF+L
Sbjct: 275 EFIDHIQLNVNGEHNVKNALAAIAAAKRIGID-------VDTMKKGLLGFTGAKRRFELK 327
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
GT + DD+AHHPTE+RA L++A+ +P+ L VFQPHTYSR + DDFA ALS
Sbjct: 328 GTCNDFTVVDDYAHHPTEIRATLESAKN-YPHNELWCVFQPHTYSRTIAFLDDFAKALSL 386
Query: 487 ADQVVVSAV 495
D V+V+ +
Sbjct: 387 CDHVIVTDI 395
>gi|226941967|ref|YP_002797041.1| UDP-N-acetylmuramate--L-alanine ligase [Laribacter hongkongensis
HLHK9]
gi|254766007|sp|C1D5L5.1|MURC_LARHH RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|226716894|gb|ACO76032.1| MurC [Laribacter hongkongensis HLHK9]
Length = 469
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 153/433 (35%), Positives = 225/433 (51%), Gaps = 47/433 (10%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K++ IHFVGIGG G+S +A++ L G+ VSGSDL S+ E L AGA +H+GH+
Sbjct: 1 MKHKVRHIHFVGIGGVGMSGIAEVLLTLGYTVSGSDLAASATTERLAAAGAQIHVGHAEG 60
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
++ G N VV S+A+ DN E++ A++ G+PI R LA+L IA++G+H
Sbjct: 61 HVHGA------NVVVTSTAVQADNPEVMAARAAGIPIVPRAQMLAELMRFKQGIAIAGTH 114
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S++A L G D T ++G + + G G V EADE D FL LSP
Sbjct: 115 GKTTTTSLVASALGRAGLDPTFVIGGRLTAAGSNARL-GSGDYLVAEADESDASFLCLSP 173
Query: 251 SVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
+AVVTN+D +H+D + D + +K F FL+++ G V+C D + R +L + +
Sbjct: 174 VMAVVTNIDADHMDTYGHDFERLKQAFIDFLQRLPFYGRAVLCIDDKHVREILPFVTR-- 231
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNV-QGGSDYILCERGRP 368
+ TYG + D A+++ P Q D + ++G
Sbjct: 232 -----------------------PLTTYGLTPDADVRADNIRPVAGQMLFDVVWQQQGEE 268
Query: 369 LAQ-ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
++L +PG HNVLN+LA IA L D I + L++F GV RRF G
Sbjct: 269 QRHPVTLNLPGRHNVLNALAAIAIGLECGAD-------IGAIAAGLTEFSGVGRRFQRYG 321
Query: 428 TIY-----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFAN 482
I + DD+ HHP E+ A L AAR FP + L+ FQPH Y+R L +DF
Sbjct: 322 DIALPAGGQATVVDDYGHHPVEMAATLAAARGAFPERRLVLAFQPHRYTRTRDLFEDFVG 381
Query: 483 ALSEADQVVVSAV 495
LS D ++++ V
Sbjct: 382 VLSTVDALLLAEV 394
>gi|291559992|emb|CBL38792.1| UDP-N-acetylmuramate--L-alanine ligase [butyrate-producing
bacterium SSC/2]
Length = 461
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 151/429 (35%), Positives = 232/429 (54%), Gaps = 41/429 (9%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DF N+ IHF+GIGG +S LA++ +K+GF +SGSD+ S ++ L + GA +++ +
Sbjct: 4 IDF-NKPIHIHFMGIGGISMSGLAEILIKEGFSISGSDIHTSDIIKHLEDKGAKVYLSQT 62
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQD-NVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAV 186
NI + + VV ++AI D N E A +P+ KR L ++ Y N IAV
Sbjct: 63 ADNITDD-----IDLVVYTAAINFDTNEEYKEAIRRNIPVMKRATLLGQMMHNYQNAIAV 117
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
SG+HGK+TT SML+Y+L A D T VG + +G+I G + FV EA EY FL
Sbjct: 118 SGTHGKTTTTSMLSYILLAGNTDPTISVGG-ILDAINGNIRVGHSETFVTEACEYTNSFL 176
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 306
P ++++ N++ +H+D F+D D ++ FR F ++ G+L+I G+ + ++D +K
Sbjct: 177 EFFPKISIILNIEEDHMDFFKDLDDIRHSFREFAHKLPDYGYLIINGEIENIDYIVDGLK 236
Query: 307 QDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERG 366
+Y+ + N S D + Y +G + F+ +Y +G
Sbjct: 237 A----EYATFGLENDSYDYCAKNIGYD--AFGHAHFDYYY------------------KG 272
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
+ I L + G HNV N+LA IA + D + +K L F G RRF+L
Sbjct: 273 EFIDHIQLNVNGEHNVKNALAAIAAAKRIGID-------VDTMKKGLLGFTGAKRRFELK 325
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
GT + DD+AHHPTE+RA L++A+ +P+ L VFQPHTYSR + DDFA ALS
Sbjct: 326 GTCNDFTVVDDYAHHPTEIRATLESAKN-YPHNELWCVFQPHTYSRTIAFLDDFAKALSL 384
Query: 487 ADQVVVSAV 495
D V+V+ +
Sbjct: 385 CDHVIVTDI 393
>gi|402838476|ref|ZP_10886983.1| UDP-N-acetylmuramate--L-alanine ligase [Eubacteriaceae bacterium
OBRC8]
gi|402272953|gb|EJU22164.1| UDP-N-acetylmuramate--L-alanine ligase [Eubacteriaceae bacterium
OBRC8]
Length = 449
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 139/419 (33%), Positives = 221/419 (52%), Gaps = 40/419 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
I F+GIGG +SALA + G++V GSD S + L ++G ++IGH+ NI +
Sbjct: 3 IFFIGIGGISMSALAVICKNLGYDVYGSDRESSEITKKLEKSGIKIYIGHNKDNITED-- 60
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKSTTA 196
+ VV ++AI +DN E++ + ++G+ +R +L L EKY N IA+SG+HGK+TT
Sbjct: 61 ---FDMVVYTAAIAKDNEELVKSYNLGLNTMERANFLGHLMEKYENSIAISGTHGKTTTT 117
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SML + TA++G G+I G F+ EA EY FL P +A++T
Sbjct: 118 SMLTLIFNKANTSPTALIGGVFANIG-GNIEIGSSDIFITEACEYVDSFLQFFPKIAIIT 176
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F+D +++K F +F Q++ G ++ GD + +S L
Sbjct: 177 NIEADHLDYFKDLESIKKSFLKFSNQVKSNGFVIANGDDENVKSTL-------------- 222
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+ D KI GF ND+ ++V + +G ++ L + + SL++
Sbjct: 223 -----------KNSDSKIYYCGFEETNDFVCKNVKSDDEGYPNFDLFFKNELIDNFSLKV 271
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
G HN+ N++ IA K S + +K L +F GV RRF+ IG G +YD
Sbjct: 272 YGKHNIYNAICSIAAAYLC---KINS----SVIKSALLEFTGVGRRFEYIGEKNGVKVYD 324
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHPTE++A L AA+ N+ LI++FQPHTYSR L DF + D ++ + +
Sbjct: 325 DYAHHPTEIKATLNAAKSIKKNR-LISIFQPHTYSRTKSLFKDFNTCFDDTDIIIFADI 382
>gi|317499409|ref|ZP_07957676.1| UDP-N-acetylmuramate-alanine ligase [Lachnospiraceae bacterium
5_1_63FAA]
gi|316893281|gb|EFV15496.1| UDP-N-acetylmuramate-alanine ligase [Lachnospiraceae bacterium
5_1_63FAA]
Length = 463
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 151/429 (35%), Positives = 232/429 (54%), Gaps = 41/429 (9%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DF N+ IHF+GIGG +S LA++ +K+GF +SGSD+ S ++ L + GA +++ +
Sbjct: 6 IDF-NKPIHIHFMGIGGISMSGLAEILIKEGFTISGSDIHTSDIIKHLEDKGAKVYLSQT 64
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQD-NVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAV 186
NI + + VV ++AI D N E A +P+ KR L ++ Y N IAV
Sbjct: 65 ADNITDD-----IDLVVYTAAINFDTNEEYKEAIRRNIPVMKRATLLGQMMHNYQNAIAV 119
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
SG+HGK+TT SML+Y+L A D T VG + +G+I G + FV EA EY FL
Sbjct: 120 SGTHGKTTTTSMLSYILLAGNTDPTISVGG-ILDAINGNIRVGHSETFVTEACEYTNSFL 178
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 306
P ++++ N++ +H+D F+D D ++ FR F ++ G+L+I G+ + ++D +K
Sbjct: 179 EFFPKISIILNIEEDHMDFFKDLDDIRHSFREFAHKLPDYGYLIINGEIENIDYIVDGLK 238
Query: 307 QDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERG 366
+Y+ + N S D + Y +G + F+ +Y +G
Sbjct: 239 A----EYATFGLENDSYDYCAKNIGYD--AFGHAHFDYYY------------------KG 274
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
+ I L + G HNV N+LA IA + D + +K L F G RRF+L
Sbjct: 275 EFIDHIQLNVNGEHNVKNALAAIAAAKRIGID-------VDTMKKGLLGFTGAKRRFELK 327
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
GT + DD+AHHPTE+RA L++A+ +P+ L VFQPHTYSR + DDFA ALS
Sbjct: 328 GTCNDFTVVDDYAHHPTEIRATLESAKN-YPHNELWCVFQPHTYSRTIAFLDDFAKALSL 386
Query: 487 ADQVVVSAV 495
D V+V+ +
Sbjct: 387 CDHVIVTDI 395
>gi|238026133|ref|YP_002910364.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia glumae BGR1]
gi|237875327|gb|ACR27660.1| UDP-N-acetylmuramate-alanine ligase [Burkholderia glumae BGR1]
Length = 466
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 150/426 (35%), Positives = 219/426 (51%), Gaps = 49/426 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HFVGIGG+G+S +A++ + G+EVSGSDL ++ E L GA + IGH +NI+G
Sbjct: 8 VHFVGIGGAGMSGIAEVLVNLGYEVSGSDLSRNAVTERLTALGARVAIGHDAANIEGA-- 65
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
NAVV S+A+ DN E+L A+ +GVPI R LA+L IA++G+HGK+TT S
Sbjct: 66 ----NAVVTSTAVRSDNPEVLAARRLGVPIVPRAVMLAELMRLKQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL A G D T ++G + + G G V EADE D FL L P + V+TN
Sbjct: 122 LVASVLAAGGLDPTFVIGGRLIS-AGANARLGSGDFIVAEADESDASFLNLYPVIEVITN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D +K F F +++ G +V+C D R +L I +
Sbjct: 181 IDEDHMDTYGHDFARLKQAFIEFTQKLPFYGSVVVCVDDPNVRQILPFISK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++ YG + + AE V G + GR + L +
Sbjct: 232 ----------------PVVRYGLAPDAEVRAEQVAAR-DGRMHFTAIREGRAPLAVVLNL 274
Query: 377 PGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH-- 433
PG+HNV N+LA IA L + D A ++ L+ F GV RRF G I
Sbjct: 275 PGLHNVQNALAAIAIATDLGVAD--------AAIQQALADFNGVGRRFQRYGEIATADGA 326
Query: 434 ----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
+ DD+ HHP E+ A + AAR FP + L+ FQPH Y+R ++F N LS D+
Sbjct: 327 GSYTLVDDYGHHPVEMAATIAAARGAFPGRRLVLAFQPHRYTRTRDCFEEFVNVLSTVDE 386
Query: 490 VVVSAV 495
+V++ V
Sbjct: 387 LVLTEV 392
>gi|156973222|ref|YP_001444129.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio harveyi ATCC
BAA-1116]
gi|166224748|sp|A7MXR2.1|MURC_VIBHB RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|156524816|gb|ABU69902.1| hypothetical protein VIBHAR_00903 [Vibrio harveyi ATCC BAA-1116]
Length = 485
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 146/439 (33%), Positives = 223/439 (50%), Gaps = 61/439 (13%)
Query: 67 CIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG 126
+V R IHF+GIGG+G+S +A++ L +G++++GSDL + E L+ GA + IG
Sbjct: 14 AMVPEMRRVKSIHFIGIGGAGMSGIAEVLLNEGYQITGSDLSENPVTERLVSKGATVFIG 73
Query: 127 HSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAV 186
H SN++ + VV S+AI ++N E++ A+ + +PI +R LA+L + IAV
Sbjct: 74 HQASNVEK------ASVVVVSTAINEENPEVMAARELRIPIVRRAEMLAELMRFRHGIAV 127
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEA 238
+G+HGK+TT +++ + G D P F +G + G N + EA
Sbjct: 128 AGTHGKTTTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGSSRILIAEA 178
Query: 239 DEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQC 297
DE D FL L P V++VTN++ +H+D + D + +K F FL + G ++C D
Sbjct: 179 DESDASFLHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAIVCIDDPV 238
Query: 298 ARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG 357
R L+ +I + ++ITYGFS D E Q G
Sbjct: 239 IRELIPRISR-------------------------QVITYGFSEDADVRIEDYHQEGQQG 273
Query: 358 SDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFM 417
+ + GR I+L IPG HN LN+ A IA + S E+I LK ++
Sbjct: 274 K-FTVVREGRANLDITLNIPGRHNALNASAAIAVAT----EDDISDEAI--LK-AMAGTQ 325
Query: 418 GVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRL 473
G RRFD +G + + DD+ HHPTEV + AAR + +K L+ +FQPH YSR
Sbjct: 326 GTGRRFDHLGEFDTGNGHAMLVDDYGHHPTEVDVTIHAARSGWQDKRLVMIFQPHRYSRT 385
Query: 474 VVLKDDFANALSEADQVVV 492
L DDFAN L + D +++
Sbjct: 386 RDLYDDFANVLEQVDVLIM 404
>gi|409417639|ref|ZP_11257672.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas sp. HYS]
Length = 484
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 158/430 (36%), Positives = 220/430 (51%), Gaps = 49/430 (11%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
R IHFVGIGG G+ +A++ L G++VSGSDL S E L GA + IGH N
Sbjct: 14 RRIRRIHFVGIGGVGMCGIAEVLLNLGYQVSGSDLKTSPVTERLESFGAQIFIGHRAENA 73
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
D +V SSAI N E+ A +P+ R LA+L + IAV+G+HGK
Sbjct: 74 ASAD------VLVVSSAINTANPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGK 127
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+TT S+LA V A G D T ++G + + G + + EADE D FL L P V
Sbjct: 128 TTTTSLLASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLV 186
Query: 253 AVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
AVVTN+D +H+ +E D + +K F FL + G V+C D R +L Q+K+ T
Sbjct: 187 AVVTNIDADHMATYEGDFNKLKKTFVEFLHNLPFYGLAVMCLDDPVVREILPQVKRPT-- 244
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPL 369
+TYGFS D A +V Q G + + + R R
Sbjct: 245 -----------------------VTYGFSEEADVRAINVR---QSGMQTHFTVLRRDREP 278
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
+S+ +PG HNVLN+LA IA + D+ S E+I LS F GV RRF + G +
Sbjct: 279 LDVSVNMPGNHNVLNALATIA----IATDEGISDEAIVQ---GLSGFQGVGRRFQVYGEL 331
Query: 430 Y----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
+ DD+ HHPTEV AV++A R +P + L+ V+QPH YSR L DDF L+
Sbjct: 332 PVDGGSVMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVQVLA 391
Query: 486 EADQVVVSAV 495
+A+ +++ V
Sbjct: 392 DANVLLLMEV 401
>gi|350530216|ref|ZP_08909157.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio rotiferianus DAT722]
Length = 486
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 146/439 (33%), Positives = 224/439 (51%), Gaps = 61/439 (13%)
Query: 67 CIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG 126
+V R IHF+GIGG+G+S +A++ L +G++++GSDL + E L+ GA + IG
Sbjct: 14 AMVPEMRRVKSIHFIGIGGAGMSGIAEVLLNEGYQITGSDLSENPVTERLVSKGAKVFIG 73
Query: 127 HSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAV 186
H SN++ + VV S+AI ++N E++ A+ + +PI +R LA+L + IAV
Sbjct: 74 HQASNVEK------ASVVVVSTAINEENPEVIAARELRIPIVRRAEMLAELMRFRHGIAV 127
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEA 238
+G+HGK+TT +++ + G D P F +G + G N + EA
Sbjct: 128 AGTHGKTTTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGSSRILIAEA 178
Query: 239 DEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQC 297
DE D FL L P V++VTN++ +H+D + D + +K F FL + G ++C D
Sbjct: 179 DESDASFLHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAIVCIDDPV 238
Query: 298 ARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG 357
R L+ +I + ++ITYGFS D E+ Q G
Sbjct: 239 IRELIPRISR-------------------------QVITYGFSEDADVRIENYHQEGQQG 273
Query: 358 SDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFM 417
+ + GR I+L IPG HN LN+ A IA + S E+I LK ++
Sbjct: 274 K-FTVVREGRANLDITLNIPGRHNALNASAAIAVAT----EDDISDEAI--LK-AMAGTQ 325
Query: 418 GVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRL 473
G RRFD +G + + DD+ HHPTEV + AAR + +K L+ +FQPH YSR
Sbjct: 326 GTGRRFDHLGEFDTGNGHAMLVDDYGHHPTEVDVTINAARSGWQDKRLVMIFQPHRYSRT 385
Query: 474 VVLKDDFANALSEADQVVV 492
L DDFAN L + D +++
Sbjct: 386 RDLYDDFANVLEQVDVLIM 404
>gi|350563272|ref|ZP_08932094.1| UDP-N-acetylmuramate/alanine ligase [Thioalkalimicrobium aerophilum
AL3]
gi|349779136|gb|EGZ33483.1| UDP-N-acetylmuramate/alanine ligase [Thioalkalimicrobium aerophilum
AL3]
Length = 460
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 148/435 (34%), Positives = 228/435 (52%), Gaps = 55/435 (12%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K + IHFVGIGG G++ +A++ + GF VSGSD+ + + L GA + +GH
Sbjct: 1 MKEQVRHIHFVGIGGVGMAGIAEVCINLGFAVSGSDIRRHATVVRLEALGAKIQLGHQPE 60
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
+Q D VV SSAI +DN E AKS +P+ R LA+L IA++G+H
Sbjct: 61 WVQQAD------VVVVSSAIAKDNPEAAWAKSSRIPVIPRAEMLAELMRMRYGIAIAGTH 114
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S+ A +L G D T ++G + Q + G + V EADE D FL L+P
Sbjct: 115 GKTTTTSLTAAILTQGGLDPTFVIGGQLNQIGTNARL-GSSRYLVAEADESDASFLHLAP 173
Query: 251 SVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
++V+TN+D +H++ ++ D + + F+ ++ G V+C D + L+ + +
Sbjct: 174 MMSVITNIDMDHMETYQGDFSRLIHTYNEFINRLPFYGLTVLCLDDPNLKQLMPDVLR-- 231
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFND-----WYAESVCPNVQGGSDYILCE 364
K+ TYGF S D W A+ + S++ +
Sbjct: 232 -----------------------KVRTYGFDSQADVVAINWLAKGLT------SEFDVVV 262
Query: 365 RGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFD 424
+GR +++L IPG HNV N+LA I+ L L S++ ++ L+ F GV RRF+
Sbjct: 263 KGREPFRVTLNIPGQHNVRNALAAISVALEL-------DVSVSAIQQALATFGGVGRRFE 315
Query: 425 LIGT-IYGCH---IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
+ I G H + DD+ HHPTE+ A LQ AR FP++ ++ VFQPH YSR L D+F
Sbjct: 316 VYPRRIIGGHQVTLVDDYGHHPTELAATLQTARDAFPSQRIVLVFQPHRYSRTRDLFDEF 375
Query: 481 ANALSEADQVVVSAV 495
AL++AD V+++ V
Sbjct: 376 ITALTKADLVILAPV 390
>gi|305680833|ref|ZP_07403640.1| UDP-N-acetylmuramate--L-alanine ligase [Corynebacterium matruchotii
ATCC 14266]
gi|305659038|gb|EFM48538.1| UDP-N-acetylmuramate--L-alanine ligase [Corynebacterium matruchotii
ATCC 14266]
Length = 477
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 145/425 (34%), Positives = 224/425 (52%), Gaps = 39/425 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H +GIGG+G+S +A++ L +G VSGSD+ S + L GA++ +GH N+ +
Sbjct: 9 VHLIGIGGAGMSGVARILLSRGKVVSGSDVKESRPVLALQSMGAHVAVGHKAENLTLS-- 66
Query: 138 SRFPNAVVAS-SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
+ P VV S +AIPQDN E++ A+ +P+ +R L +L + ++G+HGK++T
Sbjct: 67 GQLPTVVVTSFAAIPQDNPELVAAREQNIPVIRRSDLLGELMTGSTQVLIAGTHGKTSTT 126
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM ++A G D + +G + + + G G FV EADE D L SP +AVVT
Sbjct: 127 SMAVVAMQAAGMDPSFAIGGQLNKAGTNA-HQGSGHCFVAEADESDASLLRYSPDIAVVT 185
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK-YSG 315
N++ +H+D F +A +F F ++ G LV+C D + A +L ++ K ++ Y
Sbjct: 186 NIEPDHLDFFHTPEAYFQVFDDFASRLTDTGVLVVCLDDEHAAALGERQKTKVTVRGYGS 245
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQ 375
+ + D+ Y ++ ESV Q ++ G ++++Q
Sbjct: 246 AAAAERHPDIA-----YTVV------------ESVAVADQISHAHMRV--GEREVEVAMQ 286
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI-----Y 430
IPG H VLN+ A + + GD +A L +S+F GV RRF+ G +
Sbjct: 287 IPGTHMVLNAAAALTAGVLAGGD-------VAALAQGISEFSGVRRRFEFHGAVAGGDYR 339
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKA---LIAVFQPHTYSRLVVLKDDFANALSEA 487
G +YDD+AHHPTEVRAVL AAR++ + +I VFQPH YSR +FA ALS A
Sbjct: 340 GVEVYDDYAHHPTEVRAVLTAAREKLAARGSGQVIVVFQPHMYSRTQEFAAEFAEALSLA 399
Query: 488 DQVVV 492
D VV
Sbjct: 400 DAAVV 404
>gi|325261331|ref|ZP_08128069.1| UDP-N-acetylmuramate--alanine ligase [Clostridium sp. D5]
gi|324032785|gb|EGB94062.1| UDP-N-acetylmuramate--alanine ligase [Clostridium sp. D5]
Length = 458
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 153/430 (35%), Positives = 227/430 (52%), Gaps = 45/430 (10%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
++FK + IHF+GIGG +S LA++ LK+ F VSGSD S + L + GA + G
Sbjct: 4 INFK-KPIHIHFIGIGGISMSGLAEILLKEEFTVSGSDSRKSPLTQQLEDKGARVFYGQK 62
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVS 187
NI DG VV ++AI +DN E++ A + +P+ R L +L + Y N IAVS
Sbjct: 63 AGNII--DGIE---CVVYTAAISRDNPELIEAVARKIPMLTRAELLGQLMKNYKNPIAVS 117
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT SM++++L D T VG + Q G+I G + F+ EA EY FL
Sbjct: 118 GTHGKTTTTSMISHILLEGNLDPTISVGG-ILQAIGGNIRVGNSETFITEACEYTNSFLD 176
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P ++V+ N++ +H+D F+D + ++ F +F + G LVI + Q +
Sbjct: 177 FYPRISVILNIEEDHLDFFKDLEDIRHSFHQFASLLPPDGTLVINSNIQNYEEIC----- 231
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR 367
G + IITYG S +D+ A+++ + +G + L +G
Sbjct: 232 --------------------SGLNCGIITYGSSPKSDYSAQNISYDDKGCVSFDLLRKGI 271
Query: 368 PLAQISLQIPGVHNVLNSLAVIAT--VLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
P + L + G HNV N+LA IA +L + D Q L F G RRF+
Sbjct: 272 PAEHVVLSVTGDHNVSNALASIAVAELLDIPSDMIQK---------GLISFSGTDRRFEY 322
Query: 426 IGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
GT+ G I DD+AHHPTE+ A L+AA Q +P++ L VFQPHTY+R +FA ALS
Sbjct: 323 KGTLNGTTIVDDYAHHPTEIAATLKAA-QHYPHQGLWCVFQPHTYTRTKAFFHEFAEALS 381
Query: 486 EADQVVVSAV 495
AD VV++ +
Sbjct: 382 HADHVVLADI 391
>gi|365174759|ref|ZP_09362198.1| UDP-N-acetylmuramate-alanine ligase [Synergistes sp. 3_1_syn1]
gi|363614171|gb|EHL65669.1| UDP-N-acetylmuramate-alanine ligase [Synergistes sp. 3_1_syn1]
Length = 473
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 144/424 (33%), Positives = 212/424 (50%), Gaps = 37/424 (8%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
++ KN+ IH +GIGG+G+S LA L + G +VSG D + ++YM+ L E + IGH
Sbjct: 9 INLKNKS--IHLMGIGGAGMSGLAILLDQIGAKVSGCDTIKTAYMKHLEERNIPIIIGHE 66
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSG 188
+I PN +V SSA+P D+ EIL A G+ + +R L+++ + V+G
Sbjct: 67 AKHID----EFMPNILVYSSALPNDHPEILKAWQQGIQVSRRAEVLSQIFNVRRGVGVAG 122
Query: 189 SHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGL 248
+HGK+TT+SM++ V + G D T +G + Q + G V E DE D F+
Sbjct: 123 THGKTTTSSMISLVAEKAGLDPTVAIGGELLQIGTNAKL-GTSDYMVAELDESDRSFVYF 181
Query: 249 SPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQD 308
P +A+VTN+DW+H D + AV F FL ++ G ++IC + R L ++
Sbjct: 182 HPEIAIVTNVDWDHRDHYMTFKAVTDAFAEFLTHVKSEGRVIICMEDGGVRKLCEEY--- 238
Query: 309 TGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP 368
N S ++TYG+ +W A V V GG Y L G
Sbjct: 239 -----------NVSP---------SVVTYGWGRGWNWGAAEVKHFVGGGVSYTLFHDGEE 278
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
L + L + G HNVLNSLA A + +H+ I L F G RR G
Sbjct: 279 LGAVELSVSGEHNVLNSLAAYAACHEM----GIAHDDIVK---GLKIFSGAKRRLQKTGE 331
Query: 429 IYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
+ IYDD+ HHP E+ A L R FP + ++A+FQPH +SR L +FA+ALS AD
Sbjct: 332 VGDILIYDDYGHHPNEISATLNTVRNIFPERRIVAIFQPHRFSRTAALYKEFADALSLAD 391
Query: 489 QVVV 492
+ +
Sbjct: 392 RAFI 395
>gi|424047928|ref|ZP_17785484.1| UDP-N-acetylmuramate--alanine ligase [Vibrio cholerae HENC-03]
gi|408883238|gb|EKM22025.1| UDP-N-acetylmuramate--alanine ligase [Vibrio cholerae HENC-03]
Length = 485
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 146/439 (33%), Positives = 224/439 (51%), Gaps = 61/439 (13%)
Query: 67 CIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG 126
+V R IHF+GIGG+G+S +A++ L +G++++GSDL + E L+ GA + IG
Sbjct: 14 AMVPEMRRVKSIHFIGIGGAGMSGIAEVLLNEGYQITGSDLSENPVTERLVSKGATVFIG 73
Query: 127 HSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAV 186
H SN++ + VV S+AI ++N E++ A+ + +PI +R LA+L + IAV
Sbjct: 74 HQASNVEK------ASVVVVSTAINEENPEVMAARELRIPIVRRAEMLAELMRFRHGIAV 127
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEA 238
+G+HGK+TT +++ + G D P F +G + G N + EA
Sbjct: 128 AGTHGKTTTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGSSRILIAEA 178
Query: 239 DEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQC 297
DE D FL L P V++VTN++ +H+D + D + +K F FL + G ++C D
Sbjct: 179 DESDASFLHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAIVCIDDPV 238
Query: 298 ARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG 357
R L+ +I + ++ITYGFS D E+ Q G
Sbjct: 239 IRELIPRISR-------------------------QVITYGFSEDADVRIENYHQEGQQG 273
Query: 358 SDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFM 417
+ + GR I+L IPG HN LN+ A IA + S E+I LK ++
Sbjct: 274 K-FTVVREGRANLDITLNIPGRHNALNASAAIAVAT----EDDISDEAI--LK-AMAGTQ 325
Query: 418 GVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRL 473
G RRFD +G + + DD+ HHPTEV + AAR + +K L+ +FQPH YSR
Sbjct: 326 GTGRRFDHLGEFDTGNGHAMLVDDYGHHPTEVGVTINAARSGWQDKRLVMIFQPHRYSRT 385
Query: 474 VVLKDDFANALSEADQVVV 492
L DDFAN L + D +++
Sbjct: 386 RDLYDDFANVLEQVDVLIM 404
>gi|417840913|ref|ZP_12487021.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus haemolyticus
M19501]
gi|341950724|gb|EGT77311.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus haemolyticus
M19501]
Length = 475
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 144/465 (30%), Positives = 236/465 (50%), Gaps = 68/465 (14%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+ R IHF+GIGG+G+S +A++ L +G+++SGSD+ + L +AGA ++IGH
Sbjct: 11 IIPEMRRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGLVTQRLAQAGAKIYIGH 70
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
+ +I+G + VV SSAI DN E++ AK +P+ +R LA++ + IAV+
Sbjct: 71 AEEHIEG------ASVVVVSSAIKDDNPELVAAKQKRIPVIQRAQMLAEIMRFRHGIAVA 124
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEAD 239
G+HGK+TT +M++ + D P F +G + GKN + EAD
Sbjct: 125 GTHGKTTTTAMISMIYTQAKLD---------PTFVNGGLVKSAGKNAHLGASRYLIAEAD 175
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCA 298
E D FL L P V+VVTN++ +H+D +E D + +K+ + +FL + G V+C D
Sbjct: 176 ESDASFLHLQPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLPFYGLAVMCADDPVL 235
Query: 299 RSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS 358
L+ ++ + ++ITYGFS + D+ E G
Sbjct: 236 MELVPKVGR-------------------------QVITYGFSEYADYRIEDYEQTGFQGH 270
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
++C + + L +PG HN LN+ + +A K + + A L+ L+ F G
Sbjct: 271 YTVICPNNERI-NVLLNVPGKHNALNATSALAVA------KEEGIGNEAILE-ALADFQG 322
Query: 419 VSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
RRFD +G + DD+ HHPTEV ++AAR+ + +K ++ +FQPH YSR
Sbjct: 323 AGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVGVTIKAAREGWGDKRIVMIFQPHRYSRTR 382
Query: 475 VLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
L DDF LS+ D +++ L ++A ++ A + +C
Sbjct: 383 DLFDDFVQVLSQVDALIM-------LDVYAAGEMPIVGADSKSLC 420
>gi|167571348|ref|ZP_02364222.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia oklahomensis
C6786]
Length = 464
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 153/424 (36%), Positives = 222/424 (52%), Gaps = 47/424 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ + G++VSGSDL ++ E L GA + IGH +NI+G
Sbjct: 8 IHFVGIGGAGMSGIAEVLVNLGYQVSGSDLARNAVTERLEALGACVSIGHDAANIEGA-- 65
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
NAVV S+A+ DN E+L A+ +GVPI R LA+L IA++G+HGK+TT S
Sbjct: 66 ----NAVVVSTAVRSDNPEVLAARRLGVPIVPRAVMLAELMRLKQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL A G D T ++G + + G G V EADE D FL L P + V+TN
Sbjct: 122 LVASVLAAGGLDPTFVIGGRLTS-AGANARLGTGDFIVAEADESDASFLNLYPVIEVITN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D +K F F +++ G V+C D R ++ I +
Sbjct: 181 IDADHMDTYGHDFARLKQAFIEFTQRLPFYGSAVVCIDDPNVRQIVPLISK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++ YGF+ AE+V G + + GR + L +
Sbjct: 232 ----------------PVVRYGFAPDAQVRAENVEAR-DGRMHFTVLREGREPLPVVLNL 274
Query: 377 PGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY---GC 432
PG+HNV N+LA IA L + D A ++ L++F GV RRF G I G
Sbjct: 275 PGLHNVQNALAAIAIASDLDVAD--------AAIQQALAEFNGVGRRFQRYGEIPVAGGA 326
Query: 433 H-IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ + DD+ HHP E+ A + AAR FP + L+ FQPH Y+R DDF N LS D +V
Sbjct: 327 YTLIDDYGHHPVEMAATIAAARGAFPGRRLVLAFQPHRYTRTRDCFDDFVNVLSTVDALV 386
Query: 492 VSAV 495
++ V
Sbjct: 387 LTEV 390
>gi|167564198|ref|ZP_02357114.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia oklahomensis
EO147]
Length = 464
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 153/424 (36%), Positives = 222/424 (52%), Gaps = 47/424 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ + G++VSGSDL ++ E L GA + IGH +NI+G
Sbjct: 8 IHFVGIGGAGMSGIAEVLVNLGYQVSGSDLARNAVTERLEALGACVSIGHDAANIEGA-- 65
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
NAVV S+A+ DN E+L A+ +GVPI R LA+L IA++G+HGK+TT S
Sbjct: 66 ----NAVVVSTAVRSDNPEVLAARRLGVPIVPRAVMLAELMRLKQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL A G D T ++G + + G G V EADE D FL L P + V+TN
Sbjct: 122 LVASVLAAGGLDPTFVIGGRLTS-AGANARLGTGDFIVAEADESDASFLNLYPVIEVITN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D +K F F +++ G V+C D R ++ I +
Sbjct: 181 IDADHMDTYGHDFARLKQAFIEFTQRLPFYGSAVVCIDDPNVRQIVPLISR--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++ YGF+ AE+V G + + GR + L +
Sbjct: 232 ----------------PVVRYGFAPDAQVRAENVEAR-DGRMHFTVLREGREPLPVVLNL 274
Query: 377 PGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY---GC 432
PG+HNV N+LA IA L + D A ++ L++F GV RRF G I G
Sbjct: 275 PGLHNVQNALAAIAIASDLDVAD--------AAIQQALAEFNGVGRRFQRYGEIPVAGGA 326
Query: 433 H-IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ + DD+ HHP E+ A + AAR FP + L+ FQPH Y+R DDF N LS D +V
Sbjct: 327 YTLIDDYGHHPVEMAATIAAARGAFPGRRLVLAFQPHRYTRTRDCFDDFVNVLSTVDALV 386
Query: 492 VSAV 495
++ V
Sbjct: 387 LTEV 390
>gi|33151978|ref|NP_873331.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus ducreyi
35000HP]
gi|38372292|sp|Q7VMY1.1|MURC_HAEDU RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|33148200|gb|AAP95720.1| UDP-N-acetylmuramate--alanine ligase [Haemophilus ducreyi 35000HP]
Length = 475
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 153/475 (32%), Positives = 243/475 (51%), Gaps = 72/475 (15%)
Query: 60 TFKRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEA 119
+++ N + +V R IHFVGIGG+G+S +A++ L +G+++SGSD+V S + L +A
Sbjct: 3 SYQDNIKKLVPEMRRVKQIHFVGIGGAGMSGIAEVLLNEGYQISGSDIVESIVTKHLADA 62
Query: 120 GANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE 179
GA + IGH NI G + VV SSAI ++N EI AKS +P+ +R LA++
Sbjct: 63 GAKIFIGHQAENIAG------ASVVVVSSAIEENNPEITAAKSARIPVIQRAQMLAEIMR 116
Query: 180 KYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN------ 233
+ IAV+G+HGK+TT +ML+ + G D P F +G + GKN
Sbjct: 117 FRHSIAVAGTHGKTTTTAMLSMIYTEAGLD---------PTFVNGGLVKSAGKNAHLGAS 167
Query: 234 --FVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLV 290
+ EADE D FL L P ++VVTN++ +H+D + D + +K+I+ +FL+ + G V
Sbjct: 168 RYLIAEADESDASFLHLQPMLSVVTNIEPDHMDTYGGDFEQMKTIYVKFLRNLPFYGLAV 227
Query: 291 ICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESV 350
+C D + Q+ + ++I+YGF++ D+ E+
Sbjct: 228 MCADDDVVMEIAPQVGR-------------------------QVISYGFNANADYRIENY 262
Query: 351 CPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIA--C 408
G ++C L + L +PG HN LN+ A +A E IA
Sbjct: 263 QQTGFQGHYTVICPNNERL-DVVLNVPGHHNALNATAALAVA---------KEEGIANDA 312
Query: 409 LKLPLSKFMGVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAV 464
+ L+ F G RRFD +GT + + DD+ HHPTE+ ++AARQ + +K ++ +
Sbjct: 313 ILAALADFQGAGRRFDPLGTFKRPNGTVMLIDDYGHHPTEIAVTIKAARQGWQHKRIVMI 372
Query: 465 FQPHTYSRLVVLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
FQPH YSR L DDF N LS+ D ++ L ++A ++ A + +C
Sbjct: 373 FQPHRYSRTRDLFDDFVNVLSKVD-------VLIMLDVYAAGENAIVKADSKALC 420
>gi|167838002|ref|ZP_02464861.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia thailandensis
MSMB43]
gi|424902777|ref|ZP_18326290.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia thailandensis
MSMB43]
gi|390930650|gb|EIP88051.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia thailandensis
MSMB43]
Length = 465
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 153/425 (36%), Positives = 222/425 (52%), Gaps = 48/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ + G++VSGSDL ++ E L GA + IGH +NI+G
Sbjct: 8 IHFVGIGGAGMSGIAEVLVNLGYKVSGSDLARNAVTERLEALGARVSIGHDAANIEG--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
NAVV S+A+ DN E+L A+ + VPI R LA+L IA++G+HGK+TT S
Sbjct: 65 ---ANAVVVSTAVRSDNPEVLAARRLRVPIVPRAVMLAELMRLKQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL A G D T ++G + + G G V EADE D FL L P + V+TN
Sbjct: 122 LVASVLAAGGLDPTFVIGGRLTS-AGANARLGTGDFIVAEADESDASFLNLYPVIEVITN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D +K F F +++ G V+C D R ++ I +
Sbjct: 181 IDADHMDTYGHDFARLKQAFIEFTQRLPFYGSAVVCIDDANVRQIVPLISK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++ YGFS+ AE+V G + + GR + L +
Sbjct: 232 ----------------PVVRYGFSADAQVRAENVEAR-DGRMHFTVLRDGREPLPVVLNL 274
Query: 377 PGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----G 431
PG+HNV N+LA IA L + D A ++ L++F GV RRF G I G
Sbjct: 275 PGLHNVQNALAAIAIATDLDVAD--------AAIQQALAEFNGVGRRFQRYGEIPVADGG 326
Query: 432 CH-IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ + DD+ HHP E+ A + AAR FP + L+ FQPH Y+R DDF N LS D +
Sbjct: 327 AYTLIDDYGHHPVEMAATIAAARGAFPGRRLVLAFQPHRYTRTRDCFDDFVNVLSTVDAL 386
Query: 491 VVSAV 495
V++ V
Sbjct: 387 VLTEV 391
>gi|337291119|ref|YP_004630140.1| UDP-N-acetylmuramate--L-alanine ligase [Corynebacterium ulcerans
BR-AD22]
gi|334699425|gb|AEG84221.1| UDP-N-acetylmuramate--alanine ligase [Corynebacterium ulcerans
BR-AD22]
Length = 485
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 146/431 (33%), Positives = 227/431 (52%), Gaps = 48/431 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSN--IQGN 135
+H +GIGG+G+S +A++ L +G VSGSD+ S + L GA++ +GH+ N I G
Sbjct: 13 VHLIGIGGAGMSGVARILLSRGATVSGSDVKDSRPVLALRSMGAHVAVGHAAENLTIAGE 72
Query: 136 DGSRFPNAVVAS-SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKST 194
+ P VV S +AIPQDN E++ A+ G+P+ +R L +L E + ++G+HGK++
Sbjct: 73 E----PTVVVTSFAAIPQDNPELVAARERGIPVIRRSDLLGELMEGSTQVLIAGTHGKTS 128
Query: 195 TASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAV 254
T SM ++A G D + +G + + + G G FV EADE D L P+VAV
Sbjct: 129 TTSMAVVAMQAAGMDPSFAIGGQLNKAGTNA-HQGTGDAFVAEADESDASLLRYKPNVAV 187
Query: 255 VTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYS 314
+TN++ +H+D F+ E+A +F +F +++ GG LV+C D L ++ +
Sbjct: 188 ITNIEPDHLDFFKSEEAYFEVFEKFAERLVPGGSLVVCLDDPHTAVLGQKVHE------- 240
Query: 315 GGVVSNQSSDLWGQGHDYKIITYGFSSFNDWY---AESVCPN--VQGGSDYILCERGRPL 369
+ +D K++ YG S+ Y A++V + +
Sbjct: 241 -------------EHNDIKVVGYGTSAAAADYPDIAKTVVKSFEITHSGTVATIVVEGKE 287
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
++ L+ PG H VLN+ A + + G+ + L +S F GV RRF+ GT+
Sbjct: 288 VEVVLRTPGQHMVLNAAAALTAGVIAGGE-------LTKLAAGISDFSGVRRRFEYHGTV 340
Query: 430 -----YGCHIYDDFAHHPTEVRAVLQAARQRFPNKA---LIAVFQPHTYSRLVVLKDDFA 481
G +YDD+AHHPTEV AVL AAR + + LI VFQPH YSR + D+FA
Sbjct: 341 AEGDFAGIELYDDYAHHPTEVTAVLTAARSKLQARGQGRLIVVFQPHLYSRTMNFVDEFA 400
Query: 482 NALSEADQVVV 492
ALS AD+ +V
Sbjct: 401 TALSLADEAIV 411
>gi|310829359|ref|YP_003961716.1| hypothetical protein [Eubacterium limosum KIST612]
gi|308741093|gb|ADO38753.1| hypothetical protein ELI_3802 [Eubacterium limosum KIST612]
Length = 471
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 139/420 (33%), Positives = 223/420 (53%), Gaps = 41/420 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
I F+GIGGS +S LA +AL QGF+V GSD++ SSY L + +HIGH +NI +
Sbjct: 16 IFFIGIGGSSMSGLAGMALDQGFKVEGSDMIESSYTGKLKDRDVKIHIGHDYNNIPED-- 73
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYN-LIAVSGSHGKSTTA 196
+ VV S+AI +DN +++ AK + +PI +R +L L+ ++ I V+G+HGK+TT+
Sbjct: 74 ---TDMVVYSAAIHEDNPDMVRAKDLDLPIVERSDYLGLLSLAFDKTIGVAGTHGKTTTS 130
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM+A +L D + +G +P+ G+ G FV+E+ EY FL S + ++T
Sbjct: 131 SMIAALLHYADFDPSVSIGGKLPEIG-GNACLGDSDYFVIESCEYVDSFLKTSHYIGIIT 189
Query: 257 NLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
N++ +H+D F E +K F +F + G ++ GDSQ ++ ++
Sbjct: 190 NIEEDHLDYFTEGLPQIKESFHKFGAILPPDGLMIAYGDSQDVLDTVENLRC-------- 241
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQ 375
+ TYGF NDW A ++ + G + +++
Sbjct: 242 -----------------PVTTYGFEKKNDWTAHNIQYDDMGNPSFDAYHHNEFYGHFNMK 284
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
IPG HNVLN+L+ IA L D+ A ++ L F G RRF+ G + G ++Y
Sbjct: 285 IPGEHNVLNALSCIACSEFLGIDE-------ATVQKTLDNFHGAKRRFEFRGEVNGINVY 337
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
+D+AHHPTE++ V+ A N L +FQPHTYSR L D+F +A ++AD ++++ +
Sbjct: 338 EDYAHHPTELKVVIDACLNHAHNN-LWVIFQPHTYSRTFYLFDEFVDAFAKADFIILNDI 396
>gi|262377183|ref|ZP_06070408.1| UDP-N-acetylmuramate-alanine ligase [Acinetobacter lwoffii SH145]
gi|262307921|gb|EEY89059.1| UDP-N-acetylmuramate-alanine ligase [Acinetobacter lwoffii SH145]
Length = 482
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 149/424 (35%), Positives = 225/424 (53%), Gaps = 45/424 (10%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG+G+ +A++ QG++VSGSD+ S+ L G ++IGH+ +NI+
Sbjct: 21 RIKHIHFVGIGGAGMCGIAEVLKNQGYKVSGSDIKASNTTAQLEANGIKVYIGHTANNIK 80
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
G N +V S+AI ++N EI A +P+ +R L +L + IAV+G+HGK+
Sbjct: 81 G------ANVIVVSTAIDKENPEIKTAIENRIPVVRRAEMLGELMRYRHGIAVAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S++ +L D T ++G + + + G + V EADE D FL L P A
Sbjct: 135 TTTSLITCMLAEENMDPTYVIGGLLNRTGMNAAL-GASRYIVAEADESDASFLHLEPMAA 193
Query: 254 VVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
VVTN+D +H+D + D +K F +FL+++ G V+CGD R ++ +I +
Sbjct: 194 VVTNIDADHMDTYGGSFDVLKDTFIQFLQKLPFYGLAVVCGDDANIREIMPRIAR----- 248
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQI 372
++TYGF+ ND A V + +L + PL ++
Sbjct: 249 --------------------PLLTYGFNEDNDIRAVDVDQDGMQTHFTVLRKEREPL-RV 287
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG--TIY 430
++ PG+HNVLN+LA I + D+ S SI C L F GV RRF++ G I
Sbjct: 288 TVNQPGLHNVLNALAAIG----IATDEGVSDASI-CRAL--EGFSGVGRRFEVQGEFAIE 340
Query: 431 G--CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
G + DD+ HHP EV A ++AARQ P++ L+ +FQPH YSR DDF LS D
Sbjct: 341 GGDVKLVDDYGHHPKEVEATIKAARQSHPDRRLVMMFQPHRYSRTRDCFDDFVEVLSTVD 400
Query: 489 QVVV 492
Q+++
Sbjct: 401 QLLL 404
>gi|406978774|gb|EKE00668.1| hypothetical protein ACD_21C00294G0002 [uncultured bacterium]
Length = 471
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 152/425 (35%), Positives = 217/425 (51%), Gaps = 47/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+G+GGSG++ +A++ L QG+ ++GSD ++ L GA + GH NI G D
Sbjct: 13 IHFIGVGGSGMNGIAEVLLTQGYNITGSDQNSNASTRRLTSLGATIFKGHDAKNISGAD- 71
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSA+ DN E+ A +PI R LA+L + IAV+G+HGK+TT S
Sbjct: 72 -----VVVTSSAVGPDNTEVRAAHKARLPIVPRAQMLAELMRFHYGIAVAGTHGKTTTTS 126
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A +L D T ++G + S G GK FV+EADE D FL +P +VVTN
Sbjct: 127 LIASILAGARLDPTFVIGG-ILNSASASARLGVGKYFVVEADESDASFLYFNPMASVVTN 185
Query: 258 LDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ ++++ D +K F FL ++ G V+C D+ + LL QI +
Sbjct: 186 IDADHMQTYDNDFDKLKQAFLDFLHRLPFYGLAVVCVDNPVIKGLLPQISR--------- 236
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGR-PLAQISL 374
IITYGFS D A QG D+ + R + I L
Sbjct: 237 ----------------PIITYGFSDCADVQAYDF--KQQGFACDFKVRRAQRDSVLNIHL 278
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY---- 430
+PG HNVLN+LA I T++T D A + L F GV RR G +
Sbjct: 279 NLPGKHNVLNALAAI-TIVTECCDVDD-----AAIISVLDGFTGVGRRMQRYGELSMPQG 332
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
H+ DD+ HHP E+RA L+A R +P K L+ FQPH Y+R L +DF + LSE D +
Sbjct: 333 KVHLIDDYGHHPQEIRATLEALRAAYPEKRLVLAFQPHRYTRTQTLFEDFTSVLSEVDAL 392
Query: 491 VVSAV 495
++ V
Sbjct: 393 LLMEV 397
>gi|28209954|ref|NP_780898.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium tetani E88]
gi|44888201|sp|Q899J1.1|MURC_CLOTE RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|28202389|gb|AAO34835.1| UDP-N-acetylmuramate--alanine ligase [Clostridium tetani E88]
Length = 456
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 139/428 (32%), Positives = 227/428 (53%), Gaps = 44/428 (10%)
Query: 70 DFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSV 129
DF +HF+GIGG +S +A++ LK+G++VSGSD S ++ L+ GA ++IGH
Sbjct: 4 DFLKYIKKVHFIGIGGISMSGMAEILLKKGYKVSGSDSTKSPIIDKLINLGAEIYIGHKA 63
Query: 130 SNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAVS 187
NI+ D +V ++A+ +DN E+ A + + I R +L L + KYN IAVS
Sbjct: 64 ENIKNVD------LIVYTAAVSEDNPELTKALTNNIKIMNRAEFLGYLMDGHKYN-IAVS 116
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT SM++++ D T +VG + +G++ G + F+ EA EY FL
Sbjct: 117 GTHGKTTTTSMMSHITVNANLDPTILVGGEL-NIINGNVRTGKSEYFLTEACEYKESFLK 175
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P + V+ N+D +H+D ++D + +K+ F +F I G+L+ C + + ++ I
Sbjct: 176 FFPYIGVILNIDADHLDYYKDINHIKNAFSKFANLIPKDGYLIACAEDENINDIIKNI-- 233
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR 367
D IITYG + D A+++ + +G + + + +
Sbjct: 234 -----------------------DCTIITYGLNK-GDIQAKNITFDNKGCASFDVIKNSS 269
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
L + L +PG +NVLN+LA I L DK ESI L F G RRF+L G
Sbjct: 270 VLFSVKLNVPGSYNVLNALASICVSFALNIDK----ESII---KGLESFHGTHRRFELKG 322
Query: 428 TIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ +D+AHHPTE++A L AA+ +P+ ++ VFQPHTY+R L +DF +
Sbjct: 323 VRNDVTVIEDYAHHPTEIKATLSAAKN-YPSNRILCVFQPHTYTRTYSLFEDFTESFYNT 381
Query: 488 DQVVVSAV 495
D ++++ +
Sbjct: 382 DTLILADI 389
>gi|90020496|ref|YP_526323.1| UDP-N-acetylmuramate--L-alanine ligase [Saccharophagus degradans
2-40]
gi|109892735|sp|Q21MG8.1|MURC_SACD2 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|89950096|gb|ABD80111.1| UDP-N-acetylmuramate--L-alanine ligase [Saccharophagus degradans
2-40]
Length = 474
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 219/429 (51%), Gaps = 55/429 (12%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ L QG+E+SGSDL S L G ++ IGH +N+ G
Sbjct: 18 IHFVGIGGAGMSGIAEVLLNQGYEISGSDLRESDVTRRLAGMGVHVFIGHHATNVDG--- 74
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ VV SSA+ N E++ A+ +PI +R L +L + IAV+G+HGK+TT S
Sbjct: 75 ---ASVVVNSSAVESGNPELMEAREKRIPIVRRAEMLGELMRYRHGIAVAGTHGKTTTTS 131
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+++ +L A D T I+G + + G + V EADE D FL L P V+VVTN
Sbjct: 132 LISSILAAGKKDPTFIIGGLL-NSAGSNAGLGESRYLVAEADESDASFLHLQPMVSVVTN 190
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D +E D +K F FL + G V+CGD L+ I +
Sbjct: 191 IDADHMDTYEGDFSKLKQTFIDFLHNLPFYGLAVVCGDDPIVTELIPAISR--------- 241
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDY---ILCERGRPLAQIS 373
++TYGF+ +D+ A V Q GS + G ++
Sbjct: 242 ----------------SVVTYGFNEDSDYRAFDVR---QDGSKLRFKVARPEGLATLELF 282
Query: 374 LQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIA--CLKLPLSKFMGVSRRFDL-----I 426
L +PG HNVLN+ A +A S E + ++ L+ FMGV RRF++ +
Sbjct: 283 LNMPGKHNVLNATAAVAVA---------SEEKVDDDAIQNGLANFMGVGRRFEIYGEFEV 333
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G + DD+ HHP EV A + A R +P++ L+ V+QPH YSR L +DF LS
Sbjct: 334 GAGPTAMLVDDYGHHPREVAATIAAVRDGWPDRRLVMVYQPHRYSRTRDLYEDFVEVLST 393
Query: 487 ADQVVVSAV 495
DQ+V+ V
Sbjct: 394 VDQLVLLEV 402
>gi|225021927|ref|ZP_03711119.1| hypothetical protein CORMATOL_01959 [Corynebacterium matruchotii
ATCC 33806]
gi|224945314|gb|EEG26523.1| hypothetical protein CORMATOL_01959 [Corynebacterium matruchotii
ATCC 33806]
Length = 477
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 145/425 (34%), Positives = 224/425 (52%), Gaps = 39/425 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H +GIGG+G+S +A++ L +G VSGSD+ S + L GA++ +GH N+ +
Sbjct: 9 VHLIGIGGAGMSGVARILLSRGKVVSGSDVKESRPVLALQSMGAHVTVGHKAENLTLS-- 66
Query: 138 SRFPNAVVAS-SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
+ P VV S +AIPQDN E++ A+ +P+ +R L +L + ++G+HGK++T
Sbjct: 67 GQLPTVVVTSFAAIPQDNPELVAAREHNIPVIRRSDLLGELMTGSTQVLIAGTHGKTSTT 126
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM ++A G D + +G + + + G G FV EADE D L SP +AVVT
Sbjct: 127 SMAVVAMQAAGMDPSFAIGGQLNKAGTNA-HQGSGHCFVAEADESDASLLRYSPDIAVVT 185
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK-YSG 315
N++ +H+D F +A +F F ++ G LV+C D + A +L ++ K ++ Y
Sbjct: 186 NIEPDHLDFFHTPEAYFQVFDDFAARLTDTGVLVVCLDDEHAAALGERQKTKVTVRGYGS 245
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQ 375
+ + D+ Y ++ ESV Q ++ G ++++Q
Sbjct: 246 AAAAERHPDIA-----YTVV------------ESVAVADQISHAHMRV--GEREVEVAMQ 286
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI-----Y 430
IPG H VLN+ A + + GD +A L +S+F GV RRF+ G +
Sbjct: 287 IPGTHMVLNAAAALTAGVLAGGD-------VAALAQGISEFSGVRRRFEFHGAVAGGDYR 339
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKA---LIAVFQPHTYSRLVVLKDDFANALSEA 487
G +YDD+AHHPTEVRAVL AAR++ + +I VFQPH YSR +FA ALS A
Sbjct: 340 GVEVYDDYAHHPTEVRAVLTAAREKLAARGSGQVIVVFQPHMYSRTQEFAAEFAEALSLA 399
Query: 488 DQVVV 492
D VV
Sbjct: 400 DAAVV 404
>gi|373468342|ref|ZP_09559599.1| UDP-N-acetylmuramate--L-alanine ligase [Lachnospiraceae bacterium
oral taxon 082 str. F0431]
gi|371766433|gb|EHO54688.1| UDP-N-acetylmuramate--L-alanine ligase [Lachnospiraceae bacterium
oral taxon 082 str. F0431]
Length = 460
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/419 (33%), Positives = 222/419 (52%), Gaps = 41/419 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
I+F GIGG +S LA++ L++GFEVSGSD ++ + L + G + +G NI +
Sbjct: 14 IYFCGIGGISMSGLARVLLEKGFEVSGSDTKANNRTKDLEDRGVKILVGQKRENISDD-- 71
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTTA 196
+ V ++AI +DN E + AK + + R L + K+ IAVSG+HGK+TT
Sbjct: 72 ---IDLFVYTAAIHKDNPEFIAAKEKNIKMMTRAELLGYVMSKFKESIAVSGTHGKTTTT 128
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SML+Y+L D T VG V + G+I+ G G FV EA EY FL L P+V V+
Sbjct: 129 SMLSYILLDTKLDPTISVGGIVKKIK-GNIYIGKGDTFVTEACEYTNSFLELYPTVGVIL 187
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F+D D +++ F+ F+K G ++I D+IK + + +
Sbjct: 188 NIEEDHLDFFKDLDDIRNSFKNFVKNTSPEGCIIIN----------DKIKNNREITH--- 234
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
G + ++ YG + +D YA ++ + G + L + + L +
Sbjct: 235 ------------GFEGNVVRYGTEN-SDCYATNIRYDALGYPTFDLVHKEETYEDVKLCV 281
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
G HN+ N+LA I L SI ++ L +F GV RRF++ G + G I D
Sbjct: 282 GGNHNIYNALAAICVAFEL-------GVSIEDIRKGLLEFKGVDRRFEVKGKLDGITIVD 334
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHP+E+ A L A+ R+P+ L+ VFQPHTY+R D+FAN L D+V+++ +
Sbjct: 335 DYAHHPSEISATLNIAK-RYPHDRLVVVFQPHTYTRTKAFFDEFANVLKSVDEVIIAKI 392
>gi|451816989|ref|YP_007453190.1| UDP-N-acetylmuramate--L-alanine ligase MurC [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451782968|gb|AGF53936.1| UDP-N-acetylmuramate--L-alanine ligase MurC [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 459
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 144/423 (34%), Positives = 228/423 (53%), Gaps = 43/423 (10%)
Query: 72 KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSN 131
K++ IHF+GIGG +S LA + L GF+VSGSD S ++ L GA ++IGH N
Sbjct: 7 KDKNKKIHFIGIGGISMSGLAAVLLNNGFKVSGSDFKDSPILDKLKTLGAEVYIGHKREN 66
Query: 132 IQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAVSGS 189
I+ D VV ++AIP DN+E+L A+ + + R +L ++ + KYN +A++G+
Sbjct: 67 IKDAD------LVVYTAAIPSDNLELLEAQEKNITLMDRAEFLGQIMKGHKYN-VAITGT 119
Query: 190 HGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLS 249
HGK+T SML+++ A D T +VG + G+ G F++EA EY FL
Sbjct: 120 HGKTTCTSMLSHITLAGDLDPTILVGGELDAIG-GNFRIGKSDYFLVEACEYKRSFLKFF 178
Query: 250 PSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
P V ++ N+D +H+D ++D D + F +F K I G+LV C D + +L + +T
Sbjct: 179 PYVGIILNIDADHLDCYKDIDEIADTFLKFSKLIPNDGYLVGCIDDFRVKEILSKANCNT 238
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPL 369
I+YGFS D A+++ N G + + + + + L
Sbjct: 239 -------------------------ISYGFSDNADVTAKNITFNKNGCATFDVYKGNKNL 273
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
++L +PG HN+LN+LA +T ++LI D S +SI LSK G +RF+ G +
Sbjct: 274 FTLTLNVPGKHNILNALA--STCVSLIFD--ISADSII---DGLSKCKGAHKRFEYKGEL 326
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
G + DD+AHHPTE++A L A+Q NK +FQPHTY+R L +F ++ D+
Sbjct: 327 NGVTVIDDYAHHPTEIQATLSTAKQIDHNKTY-CIFQPHTYTRTKALFTEFTECFNDVDE 385
Query: 490 VVV 492
+++
Sbjct: 386 LIL 388
>gi|398817562|ref|ZP_10576177.1| UDP-N-acetylmuramate--alanine ligase [Brevibacillus sp. BC25]
gi|398029683|gb|EJL23132.1| UDP-N-acetylmuramate--alanine ligase [Brevibacillus sp. BC25]
Length = 460
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 135/423 (31%), Positives = 232/423 (54%), Gaps = 47/423 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HFVGIGG G+SA+A++ + G++V+GSD+ + + L GA +HIGH+ ++++G D
Sbjct: 7 VHFVGIGGYGMSAIARVLIDLGYKVTGSDVAMNDLAKKLEARGAVIHIGHNAAHVEGAD- 65
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
++V S++I +DN E++ +++G+P+ R LA++ + +AV+G+HGK+TT S
Sbjct: 66 -----SIVYSTSISKDNPEVIAGQTLGIPVMHRSQMLARILNERTGVAVAGAHGKTTTTS 120
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVT 256
M+++VL+ G D T I+G + G+ G ++V+ EADE DG FL P +VT
Sbjct: 121 MISHVLEECGVDPTFIIGGEL--MSAGTNAKAGASDYVIAEADESDGSFLEYRPMYEIVT 178
Query: 257 NLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
+++ +H++ F+ D + +K + +FL ++ G ++C D R ++ +++
Sbjct: 179 SIEPDHLEHFDGDFNNLKQAYVQFLSHLKQDGKAILCIDDPHVREVMPSVEK-------- 230
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE---RGRPLAQI 372
++TY A+ +++ G C+ + L ++
Sbjct: 231 -----------------TVVTYAVDPNFVAQAQFSATSIECGDRCSTCQIYHKDERLGEL 273
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC 432
L +PG HN+ N+LA I L D S + IA LS F G RRF +IG G
Sbjct: 274 CLVVPGKHNIANALAAIIVCL----DIGLSFDKIA---QALSTFSGAKRRFQIIGDARGV 326
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+ DD+AHHPTE+ A L AR + +IAVFQP Y+R L D+F+ A +EAD+V++
Sbjct: 327 LVVDDYAHHPTEIIATLSGARA--SGRRVIAVFQPQRYTRTYFLMDEFSRAFAEADEVII 384
Query: 493 SAV 495
+ +
Sbjct: 385 TDI 387
>gi|53720634|ref|YP_109620.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia pseudomallei
K96243]
gi|76808578|ref|YP_334914.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia pseudomallei
1710b]
gi|126441898|ref|YP_001060534.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia pseudomallei
668]
gi|126454974|ref|YP_001067785.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia pseudomallei
1106a]
gi|134280221|ref|ZP_01766932.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia pseudomallei
305]
gi|167721339|ref|ZP_02404575.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia pseudomallei
DM98]
gi|167896002|ref|ZP_02483404.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia pseudomallei
7894]
gi|167904389|ref|ZP_02491594.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia pseudomallei
NCTC 13177]
gi|217425709|ref|ZP_03457199.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia pseudomallei
576]
gi|226199600|ref|ZP_03795156.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia pseudomallei
Pakistan 9]
gi|237813918|ref|YP_002898369.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia pseudomallei
MSHR346]
gi|242315936|ref|ZP_04814952.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia pseudomallei
1106b]
gi|254180547|ref|ZP_04887145.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia pseudomallei
1655]
gi|254191011|ref|ZP_04897517.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia pseudomallei
Pasteur 52237]
gi|254199124|ref|ZP_04905539.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia pseudomallei
S13]
gi|254260254|ref|ZP_04951308.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia pseudomallei
1710a]
gi|254299365|ref|ZP_04966815.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia pseudomallei
406e]
gi|386860398|ref|YP_006273347.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia pseudomallei
1026b]
gi|403520223|ref|YP_006654357.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia pseudomallei
BPC006]
gi|418377732|ref|ZP_12965771.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia pseudomallei
354a]
gi|418538861|ref|ZP_13104462.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia pseudomallei
1026a]
gi|418539630|ref|ZP_13105214.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia pseudomallei
1258a]
gi|418545880|ref|ZP_13111119.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia pseudomallei
1258b]
gi|418552332|ref|ZP_13117197.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia pseudomallei
354e]
gi|59798176|sp|Q63QJ8.1|MURC_BURPS RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|109892695|sp|Q3JND9.1|MURC_BURP1 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|166222966|sp|A3NZL4.1|MURC_BURP0 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|166222967|sp|A3NDW3.1|MURC_BURP6 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|52211048|emb|CAH37036.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia pseudomallei
K96243]
gi|76578031|gb|ABA47506.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia pseudomallei
1710b]
gi|126221391|gb|ABN84897.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia pseudomallei
668]
gi|126228616|gb|ABN92156.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia pseudomallei
1106a]
gi|134248228|gb|EBA48311.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia pseudomallei
305]
gi|157809030|gb|EDO86200.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia pseudomallei
406e]
gi|157938685|gb|EDO94355.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia pseudomallei
Pasteur 52237]
gi|169656954|gb|EDS88351.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia pseudomallei
S13]
gi|184211086|gb|EDU08129.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia pseudomallei
1655]
gi|217391297|gb|EEC31329.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia pseudomallei
576]
gi|225928346|gb|EEH24377.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia pseudomallei
Pakistan 9]
gi|237505140|gb|ACQ97458.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia pseudomallei
MSHR346]
gi|242139175|gb|EES25577.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia pseudomallei
1106b]
gi|254218943|gb|EET08327.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia pseudomallei
1710a]
gi|385346542|gb|EIF53217.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia pseudomallei
1026a]
gi|385364165|gb|EIF69904.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia pseudomallei
1258a]
gi|385365993|gb|EIF71642.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia pseudomallei
1258b]
gi|385373166|gb|EIF78232.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia pseudomallei
354e]
gi|385378070|gb|EIF82586.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia pseudomallei
354a]
gi|385657526|gb|AFI64949.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia pseudomallei
1026b]
gi|403075866|gb|AFR17446.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia pseudomallei
BPC006]
Length = 465
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 151/425 (35%), Positives = 220/425 (51%), Gaps = 48/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ + G++VSGSDL ++ E L GA + IGH +NI+G
Sbjct: 8 IHFVGIGGAGMSGIAEVLVNLGYQVSGSDLARNAVTERLEALGARVSIGHDAANIEG--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
NAVV S+A+ DN E+L A+ + VPI R LA+L IA++G+HGK+TT S
Sbjct: 65 ---ANAVVVSTAVRSDNPEVLAARRLRVPIVPRAVMLAELMRLKQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL A G D T ++G + + G G V EADE D FL L P + V+TN
Sbjct: 122 LVASVLAAGGLDPTFVIGGRLTS-AGANARLGTGDFIVAEADESDASFLNLYPVIEVITN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D +K F F +++ G V+C D R ++ I +
Sbjct: 181 IDADHMDTYGHDFARLKQAFIEFTQRLPFYGSAVVCIDDANVRQIVPLISK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++ YGF++ AE+V G + + GR + L +
Sbjct: 232 ----------------PVVRYGFAADAQVRAENVEAR-DGRMHFTVRREGREPLPVVLNL 274
Query: 377 PGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH-- 433
PG+HNV N+LA IA L + D A ++ L++F GV RRF G I
Sbjct: 275 PGLHNVQNALAAIAIATDLDVAD--------AAIQQALAEFNGVGRRFQRYGEIAAAGGG 326
Query: 434 ---IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP E+ A + AAR FP + L+ FQPH Y+R DDF N LS D +
Sbjct: 327 AYTLIDDYGHHPVEMAATIAAARGAFPGRRLVLAFQPHRYTRTRDCFDDFVNVLSTVDAL 386
Query: 491 VVSAV 495
V++ V
Sbjct: 387 VLTEV 391
>gi|269960242|ref|ZP_06174617.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio harveyi 1DA3]
gi|269835049|gb|EEZ89133.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio harveyi 1DA3]
Length = 485
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 145/439 (33%), Positives = 224/439 (51%), Gaps = 61/439 (13%)
Query: 67 CIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG 126
+V R IHF+GIGG+G+S +A++ L +G++++GSDL + E L+ GA + IG
Sbjct: 14 AMVPEMRRVKSIHFIGIGGAGMSGIAEVLLNEGYQITGSDLSENPVTERLVSKGATVFIG 73
Query: 127 HSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAV 186
H SN++ + VV S+AI ++N E++ A+ + +PI +R LA+L + IAV
Sbjct: 74 HQASNVEK------ASVVVVSTAINEENPEVMAARELRIPIVRRAEMLAELMRFRHGIAV 127
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEA 238
+G+HGK+TT +++ + G D P F +G + G N + EA
Sbjct: 128 AGTHGKTTTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGSSRILIAEA 178
Query: 239 DEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQC 297
DE D FL L P V++VTN++ +H+D + D + +K F FL + G ++C D
Sbjct: 179 DESDASFLHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAIVCIDDPV 238
Query: 298 ARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG 357
R L+ +I + ++ITYGF+ D E+ Q G
Sbjct: 239 IRELIPRISR-------------------------QVITYGFADDADVRIENYHQEGQQG 273
Query: 358 SDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFM 417
+ + GR I+L IPG HN LN+ A IA + S E+I LK ++
Sbjct: 274 K-FTVVREGRANLDITLNIPGRHNALNASAAIAVAT----EDDISDEAI--LK-AMAGTQ 325
Query: 418 GVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRL 473
G RRFD +G + + DD+ HHPTEV + AAR + +K L+ +FQPH YSR
Sbjct: 326 GTGRRFDHLGEFDTGNGHAMLVDDYGHHPTEVDVTINAARSGWQDKRLVMIFQPHRYSRT 385
Query: 474 VVLKDDFANALSEADQVVV 492
L DDFAN L + D +++
Sbjct: 386 RDLYDDFANVLEQVDVLIM 404
>gi|226311413|ref|YP_002771307.1| UDP-N-acetylmuramate--L-alanine ligase [Brevibacillus brevis NBRC
100599]
gi|254765985|sp|C0ZAJ4.1|MURC_BREBN RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|226094361|dbj|BAH42803.1| UDP-N-acetylmuramate--L-alanine ligase [Brevibacillus brevis NBRC
100599]
Length = 460
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 135/423 (31%), Positives = 232/423 (54%), Gaps = 47/423 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HFVGIGG G+SA+A++ + G++V+GSD+ + + L GA +HIGH+ ++++G D
Sbjct: 7 VHFVGIGGYGMSAIARVLIDLGYKVTGSDVAMNDLAKKLEARGAVIHIGHNAAHVEGAD- 65
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
++V S++I +DN E++ +++G+P+ R LA++ + +AV+G+HGK+TT S
Sbjct: 66 -----SIVYSTSISKDNPEVIAGQALGIPVMHRSQMLARILNERTGVAVAGAHGKTTTTS 120
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVT 256
M+++VL+ G D T I+G + G+ G ++V+ EADE DG FL P +VT
Sbjct: 121 MISHVLEECGVDPTFIIGGEL--MSAGTNAKAGTSDYVIAEADESDGSFLEYRPMYEIVT 178
Query: 257 NLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
+++ +H++ F+ D + +K + +FL ++ G ++C D R ++ +++
Sbjct: 179 SIEPDHLEHFDGDFNNLKQAYVQFLSHLKPDGKAILCIDDSHVREVMPSVEK-------- 230
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE---RGRPLAQI 372
++TY A+ +++ G C+ + L ++
Sbjct: 231 -----------------TVVTYAVDPNFVAQAQFSATSIECGDRCSTCQVYHKDERLGEL 273
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC 432
L +PG HN+ N+LA I L D S + IA LS F G RRF +IG G
Sbjct: 274 CLVVPGKHNIANALAAIVVCL----DIGLSFDKIA---QALSTFSGAKRRFQIIGDARGV 326
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+ DD+AHHPTE+ A L AR + +IAVFQP Y+R L D+F+ A +EAD+V++
Sbjct: 327 LVVDDYAHHPTEIIATLSGARA--SGRRVIAVFQPQRYTRTYFLMDEFSRAFAEADEVII 384
Query: 493 SAV 495
+ +
Sbjct: 385 TDI 387
>gi|225571175|ref|ZP_03780173.1| hypothetical protein CLOHYLEM_07263 [Clostridium hylemonae DSM
15053]
gi|225160006|gb|EEG72625.1| hypothetical protein CLOHYLEM_07263 [Clostridium hylemonae DSM
15053]
Length = 459
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 148/419 (35%), Positives = 227/419 (54%), Gaps = 40/419 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG +S LA++ LK+GF VSGSD S+ + L GA + G SNI DG
Sbjct: 12 VHFIGIGGISMSGLAEILLKEGFTVSGSDNKESALTDHLSSLGATIFYGQKASNII--DG 69
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTTA 196
+ V ++AI +DN E A G+P+ R L +L Y++ IAVSG+HGK+TT
Sbjct: 70 ---IDVAVYTAAIHEDNEEFKAAAQKGIPMLSRAELLGQLMTNYDVPIAVSGTHGKTTTT 126
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SML+++L A D T VG + + G+I G FV EA EY FL P ++V+
Sbjct: 127 SMLSHILLAGDLDPTISVGG-ILKAIGGNIKVGTSGLFVTEACEYTNSFLHFFPKISVIL 185
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N+D +H+D F+D D +++ FRRF + G LVI G+ ++ +++ T
Sbjct: 186 NIDEDHLDFFKDLDDIRNSFRRFAALLPADGTLVINGE-------IENLEEITA------ 232
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
G +++TYG ++ A ++ N +G + + L + G + ++ L +
Sbjct: 233 ------------GLSCRVVTYGTEHSMNYSASNISHNEKGDASFDLVKNGEFMERVQLSV 280
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
G HNV N+LA +A L +A + L +F G +RRF+ G G + D
Sbjct: 281 NGDHNVSNALAAVAVADIL-------SVPLADICRGLKEFAGTNRRFEHKGEKNGFTVID 333
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHPTE++A L AA +P+K L VFQPHTY+R L +F +AL+ AD V+++ +
Sbjct: 334 DYAHHPTEIKASLTAAAH-YPHKELWCVFQPHTYTRTKALFHEFVDALALADHVILADI 391
>gi|379715693|ref|YP_005304030.1| UDP-N-acetyl muramate--L-alanine ligase [Corynebacterium
pseudotuberculosis 316]
gi|386740728|ref|YP_006213908.1| UDP-N-acetyl muramate--L-alanine ligase [Corynebacterium
pseudotuberculosis 31]
gi|387138990|ref|YP_005694969.1| UDP-N-acetyl muramate--L-alanine ligase [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|387140977|ref|YP_005696955.1| UDP-N-acetyl muramate--L-alanine ligase [Corynebacterium
pseudotuberculosis 1/06-A]
gi|389850744|ref|YP_006352979.1| UDP-N-acetyl muramate--L-alanine ligase [Corynebacterium
pseudotuberculosis 258]
gi|349735468|gb|AEQ06946.1| UDP-N-acetyl muramate--L-alanine ligase [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|355392768|gb|AER69433.1| UDP-N-acetyl muramate--L-alanine ligase [Corynebacterium
pseudotuberculosis 1/06-A]
gi|377654399|gb|AFB72748.1| UDP-N-acetyl muramate--L-alanine ligase [Corynebacterium
pseudotuberculosis 316]
gi|384477422|gb|AFH91218.1| UDP-N-acetyl muramate--L-alanine ligase [Corynebacterium
pseudotuberculosis 31]
gi|388248050|gb|AFK17041.1| UDP-N-acetyl muramate--L-alanine ligase [Corynebacterium
pseudotuberculosis 258]
Length = 485
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 143/439 (32%), Positives = 225/439 (51%), Gaps = 64/439 (14%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H +GIGG+G+S +A++ L +G VSGSD+ S + L GA++ +GH+ N+ +
Sbjct: 13 VHLIGIGGAGMSGVARILLSRGATVSGSDVKDSRAVLALRSMGAHVAVGHAAENL--SIA 70
Query: 138 SRFPNAVVAS-SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
P VV S +AIPQDN E++ A+ +G+P+ +R L +L E + ++G+HGK++T
Sbjct: 71 GEKPTVVVTSFAAIPQDNPELVAARELGIPVIRRSDLLGELMEGSTQVLIAGTHGKTSTT 130
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM ++A G D + +G + + + G G FV EADE D L P++AV+T
Sbjct: 131 SMAVVAMQAAGMDPSFAIGGQLNKAGTNA-HQGTGDAFVAEADESDASLLRYKPNIAVIT 189
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F+ E+A +F +F ++ GG L++C D L +I +
Sbjct: 190 NIEPDHLDFFKSEEAYFEVFEKFADRLVPGGSLIVCLDDPHTAMLGQKIHE--------- 240
Query: 317 VVSNQSSDLWGQGHDYKIITYG---------------FSSFNDWYAESVCPNVQGGSDYI 361
+ D K++ YG SF ++ +V V GG +
Sbjct: 241 -----------KHKDIKVVGYGTVAASAEYPDIAKTVVESFEITHSGTVATIVVGGQE-- 287
Query: 362 LCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSR 421
++ L+ PG H VLN+ A + + GD + L +S F GV R
Sbjct: 288 --------TEVVLRTPGRHMVLNAAAALTAGVIAGGD-------LFKLAAGISDFSGVRR 332
Query: 422 RFDLIGTI-----YGCHIYDDFAHHPTEVRAVLQAARQRFPNKA---LIAVFQPHTYSRL 473
RF+ G + G +YDD+AHHPTEV AVL AAR + + L+ +FQPH YSR
Sbjct: 333 RFEYHGVVAEGDFAGIELYDDYAHHPTEVSAVLTAARAKLQARGQGRLLVIFQPHLYSRT 392
Query: 474 VVLKDDFANALSEADQVVV 492
+ D+FA ALS AD+ +V
Sbjct: 393 INFVDEFAAALSLADEAIV 411
>gi|392400915|ref|YP_006437515.1| UDP-N-acetyl muramate--L-alanine ligase [Corynebacterium
pseudotuberculosis Cp162]
gi|390531993|gb|AFM07722.1| UDP-N-acetyl muramate--L-alanine ligase [Corynebacterium
pseudotuberculosis Cp162]
Length = 485
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 144/439 (32%), Positives = 225/439 (51%), Gaps = 64/439 (14%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H +GIGG+G+S +A++ L +G VSGSD+ S + L GA++ +GH+ N+ +
Sbjct: 13 VHLIGIGGAGMSGVARILLSRGATVSGSDVKDSRAVLALRSMGAHVAVGHAAENL--SIA 70
Query: 138 SRFPNAVVAS-SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
P VV S +AIPQDN E++ A+ +G+P+ +R L +L E + ++G+HGK++T
Sbjct: 71 GEKPTVVVTSFAAIPQDNPELVAARELGIPVIRRSDLLGELMEGSTQVLIAGTHGKTSTT 130
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM ++A G D + +G + + + G G FV EADE D L P++AV+T
Sbjct: 131 SMAVVAMQAAGMDPSFAIGGQLNKAGTNA-HQGTGDAFVAEADESDASLLRYKPNIAVIT 189
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F+ E+A +F +F ++ GG LV+C D L +I +
Sbjct: 190 NIEPDHLDFFKSEEAYFEVFEKFADRLVHGGSLVVCLDDPHTAMLGQKIHE--------- 240
Query: 317 VVSNQSSDLWGQGHDYKIITYG---------------FSSFNDWYAESVCPNVQGGSDYI 361
+ D K++ YG SF ++ +V V GG +
Sbjct: 241 -----------KHKDIKVVGYGTVAASAEYPDIAKTVVESFEITHSGTVATIVVGGQE-- 287
Query: 362 LCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSR 421
++ L+ PG H VLN+ A + + GD + L +S F GV R
Sbjct: 288 --------TEVVLRTPGRHMVLNAAAALTAGVIAGGD-------LFKLAAGISDFSGVRR 332
Query: 422 RFDLIGTI-----YGCHIYDDFAHHPTEVRAVLQAARQRFPNKA---LIAVFQPHTYSRL 473
RF+ G + G +YDD+AHHPTEV AVL AAR + + L+ +FQPH YSR
Sbjct: 333 RFEYHGVVAEGDFAGIELYDDYAHHPTEVSAVLTAARAKLQARGQGRLLVIFQPHLYSRT 392
Query: 474 VVLKDDFANALSEADQVVV 492
+ D+FA ALS AD+ +V
Sbjct: 393 INFVDEFAAALSLADEAIV 411
>gi|422675670|ref|ZP_16735012.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
aceris str. M302273]
gi|330973386|gb|EGH73452.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
aceris str. M302273]
Length = 486
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 158/430 (36%), Positives = 222/430 (51%), Gaps = 49/430 (11%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
R IHFVGIGG G+ +A++ L G+EVSGSDL S+ E L GA + +GH N
Sbjct: 14 RRIRRIHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKGSAVTERLESFGAQIFVGHRAENT 73
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
G D +V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK
Sbjct: 74 IGAD------VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGK 127
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+TT S++A V A G D T ++G + + G + + EADE D FL L P V
Sbjct: 128 TTTTSLIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLV 186
Query: 253 AVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
AVVTN+D +H+ +E D + +K F FL + G V+C D R +L +K+ T
Sbjct: 187 AVVTNIDADHMATYEGDFNKLKKTFVEFLHNLPFYGLAVMCIDDPVVREILPLVKRPT-- 244
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPL 369
+TYGFS D A +V Q G + + + R R
Sbjct: 245 -----------------------LTYGFSESADIRAINVR---QDGMLTFFTVLRRDREP 278
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG-- 427
+S+ +PG HNVLNSLA IA + D+ S E+I LS F GV RRF + G
Sbjct: 279 LDVSVNMPGNHNVLNSLATIA----IATDEGVSDEAIVQ---GLSGFQGVGRRFQVYGEL 331
Query: 428 TIYGCHIY--DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
+ G H+ DD+ HHP EV AV+ A R +P++ L+ V+QPH +SR L DDF L+
Sbjct: 332 PVDGGHVMLVDDYGHHPREVAAVINAVRGGWPDRRLVMVYQPHRFSRTRDLYDDFVQVLA 391
Query: 486 EADQVVVSAV 495
EA+ +++ V
Sbjct: 392 EANVLLLMEV 401
>gi|406903255|gb|EKD45394.1| hypothetical protein ACD_69C00313G0001 [uncultured bacterium]
Length = 472
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 151/429 (35%), Positives = 221/429 (51%), Gaps = 47/429 (10%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGGSG++ +A++ L QG+ ++GSD +S + L+ GA ++ GH +NI
Sbjct: 9 RIKTIHFVGIGGSGMNGIAEVLLNQGYNITGSDQSVNSATKRLISLGAKVYQGHDATNII 68
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
G D VV SSAI N E+ A + +P+ R LA+L IA++G+HGK+
Sbjct: 69 GAD------VVVTSSAIDSTNPEVQAASAAHIPVLPRAQMLAELMRFNYGIAIAGTHGKT 122
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S++A +L D T ++G + S G G++FV+EADE D FL +P V+
Sbjct: 123 TTTSLVASILAEAKLDPTFVIGG-ILNSASSSARLGAGQHFVVEADESDASFLYFNPMVS 181
Query: 254 VVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
VVTN+D +H+ + D D +K F FL ++ G V+C D R +L +I +
Sbjct: 182 VVTNIDADHMQTYGNDFDRLKQAFLDFLHRLPFYGLAVVCLDDPVVREILPRISR----- 236
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS-DYILCERGRPLA- 370
+ITYGFS D A QG S D+ +C + + +
Sbjct: 237 --------------------PVITYGFSDDADVRAYDFIQ--QGFSCDFKICWKQKNIEM 274
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
I+L +PG HNVLNSLA IA + A + L++F GV RR G I
Sbjct: 275 NINLNLPGRHNVLNSLAAIAVATEC------CNVDAATINSALAQFGGVGRRMQRYGEIV 328
Query: 431 ----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
+ DD+ HHP E++ LQA R +P + L+ FQPH Y+R L +DF + LSE
Sbjct: 329 MPQGKVFLVDDYGHHPQEIQVTLQALRAAWPERRLVLAFQPHRYTRTRDLFEDFTSVLSE 388
Query: 487 ADQVVVSAV 495
D +++ V
Sbjct: 389 VDVLLLMEV 397
>gi|296269387|ref|YP_003652019.1| UDP-N-acetylmuramate--L-alanine ligase [Thermobispora bispora DSM
43833]
gi|296092174|gb|ADG88126.1| UDP-N-acetylmuramate/alanine ligase [Thermobispora bispora DSM
43833]
Length = 472
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 156/428 (36%), Positives = 221/428 (51%), Gaps = 57/428 (13%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G +HF+GIGG+G+S +A++ LK+G VSGSD+ S+ + L E GA +HIGH+ N+
Sbjct: 16 GRVHFIGIGGAGMSGIARILLKRGVRVSGSDVRDSAVLAELRELGATVHIGHAAGNVGDV 75
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D VV S+AI N E+ A+ + + R LA + E IAV+G+HGK+TT
Sbjct: 76 D------TVVVSTAIRDSNPELQEARRRNLRVIPRAAALAAVMEGRTGIAVAGTHGKTTT 129
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SML L+ G D + VG + G+ G G FV EADE DG FL L P++A+V
Sbjct: 130 TSMLTVALQKCGADPSYCVGGLLATTGLGA-DDGAGDLFVAEADESDGSFLMLRPAIAIV 188
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN++ +H+D + D AV F RF++ RVG LV+C D + +L ++
Sbjct: 189 TNVEADHLDNYGDVRAVHESFARFVE--RVGSLLVLCADDPGSAALAAPARE-------- 238
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER---GRPLAQI 372
++TYG S+ D+ V P G + G PL ++
Sbjct: 239 --------------RGLTVVTYGESAGADYRTVDVVPEGLGVEFAVAAGSPGPGWPL-RV 283
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKF-------MGVSRRFDL 425
L +PG HN LN+ AVIA + D+ L LPL + G RRF+
Sbjct: 284 RLAVPGRHNALNATAVIA-----VADR---------LGLPLGEVAAGLAAFGGAKRRFEA 329
Query: 426 IGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKA-LIAVFQPHTYSRLVVLKDDFANAL 484
G G ++D +AHHPTE+ A L+AAR+ + +IAVFQPH YSR D F AL
Sbjct: 330 KGEAGGVAVFDSYAHHPTELTADLRAAREVNAGRGRVIAVFQPHLYSRTRFFADAFGAAL 389
Query: 485 SEADQVVV 492
AD+V+V
Sbjct: 390 GLADEVIV 397
>gi|373107077|ref|ZP_09521377.1| UDP-N-acetylmuramate-alanine ligase [Stomatobaculum longum]
gi|371652016|gb|EHO17442.1| UDP-N-acetylmuramate-alanine ligase [Stomatobaculum longum]
Length = 469
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 155/450 (34%), Positives = 231/450 (51%), Gaps = 43/450 (9%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DFK + ++F+GIGG +S LA++ K+GF VSGSD S + E L G ++IG
Sbjct: 6 IDFK-KPCHVYFMGIGGVSMSGLAEILRKEGFSVSGSDAKESEFTEHLKTQGIRIYIGQR 64
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVS 187
N+ S + V+ ++AI DN E AK G+P+ R L +L Y IAVS
Sbjct: 65 AENL-----SSPVDYVIYTAAIHPDNPEFREAKRQGIPMLSRAELLGQLMRCYGESIAVS 119
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT SML+ +L A D T +G ++ G+I GG F+LEA EY FL
Sbjct: 120 GTHGKTTTTSMLSLILLAAKKDPTISLGGNLDAI-GGNIRVGGSDTFLLEACEYTNSFLS 178
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P++ V+ N++ +H+D F+D D ++ FRRF++++ G LVI + R ++ K
Sbjct: 179 FFPTLEVILNIEADHLDFFKDIDDIRHSFRRFVRRMPENGSLVIDNRIRDYREIVGDFKG 238
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR 367
K++T G + D+Y + + +G + + E G+
Sbjct: 239 -------------------------KVVTVG-TEAADYYPTDIRFDERGNAAFTPTEHGK 272
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
L +I L +PG HNV N+LA +A L E L + G RRF+ G
Sbjct: 273 ALPRIQLCVPGEHNVYNALAALAACRLLGIPAETVREG-------LEAYRGTERRFEKKG 325
Query: 428 TIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
G I DD+AHHP E+ A L+AA+ +P+KAL VFQPHTY+R L DF AL A
Sbjct: 326 EYRGAVIVDDYAHHPQEIAATLKAAKN-YPHKALWCVFQPHTYTRTKALLPDFGKALEGA 384
Query: 488 DQVVVSAVLVFWLI-IFAVSSFWLIMAINS 516
D V+++ + +SS + AIN+
Sbjct: 385 DHVLLADIYAARETDTLGISSRDVAEAINA 414
>gi|320352822|ref|YP_004194161.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfobulbus propionicus
DSM 2032]
gi|320121324|gb|ADW16870.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfobulbus propionicus
DSM 2032]
Length = 461
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 155/420 (36%), Positives = 216/420 (51%), Gaps = 43/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+S +A+L L G+ VSGSDL + L G +H GH + + G D
Sbjct: 8 IHFVGIGGIGMSGIAELLLSLGYRVSGSDLRVTDITRRLEHLGGVIHQGHDAAWVAGAD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLT--EKYNLIAVSGSHGKSTT 195
VV S+AI DN E++ AK VP+ +R LA+L +KY IAV+GSHGK++T
Sbjct: 67 -----VVVTSTAIAADNPEVVAAKEAHVPVVQRAEMLAELMRLKKYG-IAVAGSHGKTST 120
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L G D T +VG V + G G+ V EADE DG FL LSP + VV
Sbjct: 121 TSMVAAILAEAGLDPTVVVGGKVHGLGSNARL-GEGEFLVAEADESDGSFLKLSPVIEVV 179
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D + D D +K +F F+ ++ G V+C D+ LL +I++
Sbjct: 180 TNIDLEHLDYYRDIDHIKDMFLEFINRLPFYGVAVVCIDNDHIAQLLPRIQK-------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQ 375
+I TYG + D A + G S Y + R L I L
Sbjct: 232 -----------------RIATYGLTEQADLQAVKIISG-NGTSQYTVRSRKEELGVIRLN 273
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
PG H + NSLA ++ L L D + + L F GV RR + G G +
Sbjct: 274 RPGKHLIYNSLAAVSVGLELEID-------FSVIARALENFQGVQRRLQIKGEAAGVLVV 326
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+ HHPTE+RA L A R+ +P++ ++ FQPH YSR L +F A AD +V++ +
Sbjct: 327 DDYGHHPTEIRATLDAVREGWPDRRVVVAFQPHRYSRTKGLFAEFTTAFRRADVLVLTDI 386
>gi|384516029|ref|YP_005711121.1| UDP-N-acetylmuramate--L-alanine ligase [Corynebacterium ulcerans
809]
gi|334697230|gb|AEG82027.1| UDP-N-acetylmuramate--alanine ligase [Corynebacterium ulcerans 809]
Length = 485
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 146/431 (33%), Positives = 226/431 (52%), Gaps = 48/431 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSN--IQGN 135
+H +GIGG+G+S +A++ L +G VSGSD S + L GA++ +GH+ N I G
Sbjct: 13 VHLIGIGGAGMSGVARILLSRGATVSGSDAKDSRPVLALRSMGAHVAVGHAAENLTIAGE 72
Query: 136 DGSRFPNAVVAS-SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKST 194
+ P VV S +AIPQDN E++ A+ G+P+ +R L +L E + ++G+HGK++
Sbjct: 73 E----PTVVVTSFAAIPQDNPELVAARERGIPVIRRSDLLGELMEGSTQVLIAGTHGKTS 128
Query: 195 TASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAV 254
T SM ++A G D + +G + + + G G FV EADE D L P+VAV
Sbjct: 129 TTSMAVVAMQAAGMDPSFAIGGQLNKAGTNA-HQGTGDAFVAEADESDASLLRYKPNVAV 187
Query: 255 VTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYS 314
+TN++ +H+D F+ E+A +F +F +++ GG LV+C D L ++ +
Sbjct: 188 ITNIEPDHLDFFKSEEAYFEVFEKFAERLVPGGSLVVCLDDPHTAMLGQKVHE------- 240
Query: 315 GGVVSNQSSDLWGQGHDYKIITYGFSSFNDWY---AESVCPN--VQGGSDYILCERGRPL 369
+ +D K++ YG S+ Y A++V + +
Sbjct: 241 -------------EHNDIKVVGYGTSAAAADYPDIAKTVVKSFEITHSGTVATIVVEGKE 287
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
++ L+ PG H VLN+ A + + G+ + L +S F GV RRF+ GT+
Sbjct: 288 VEVVLRTPGQHMVLNAAAALTAGVIAGGE-------LTKLAAGISDFSGVRRRFEYHGTV 340
Query: 430 -----YGCHIYDDFAHHPTEVRAVLQAARQRFPNKA---LIAVFQPHTYSRLVVLKDDFA 481
G +YDD+AHHPTEV AVL AAR + + LI VFQPH YSR + D+FA
Sbjct: 341 AEGDFAGIELYDDYAHHPTEVTAVLTAARSKLQARGQGRLIVVFQPHLYSRTMNFVDEFA 400
Query: 482 NALSEADQVVV 492
ALS AD+ +V
Sbjct: 401 TALSLADEAIV 411
>gi|222053882|ref|YP_002536244.1| UDP-N-acetylmuramate--L-alanine ligase [Geobacter daltonii FRC-32]
gi|254766004|sp|B9M173.1|MURC_GEOSF RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|221563171|gb|ACM19143.1| UDP-N-acetylmuramate/alanine ligase [Geobacter daltonii FRC-32]
Length = 458
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 147/419 (35%), Positives = 228/419 (54%), Gaps = 43/419 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+S +A++ L G++VSGSDL S E L + G +H+GH+ SN++ D
Sbjct: 8 IHFVGIGGIGMSGIAEVLLNLGYKVSGSDLRKSEITERLEQLGGEIHLGHTGSNVERAD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSA+ DN E++ A+ +P+ R LA+L IA++G+HGK+TT S
Sbjct: 67 -----VVVISSAVHDDNPEVIEARERLIPVIPRAEMLAELMRMKYGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A +L G D T ++G + + G GK V EADE DG FL LSP++AVVTN
Sbjct: 122 MVATILATGGIDPTIVIGGRLNSIGTNARL-GQGKFLVAEADESDGSFLKLSPTIAVVTN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D +H+D + + +K F F+ +I G V+C D+ ++ +K+
Sbjct: 181 IDADHLDFYSGIEEIKDTFVEFINKIPFYGLAVLCLDNGNVADIIPLVKK---------- 230
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPLAQISLQI 376
+ TYG ++ D+ A + +G + ++ +G+ L +IS +
Sbjct: 231 ---------------RFTTYGLTAQADFRATEI--RHEGFTTSFVAHYKGQKLGEISFNM 273
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG HNVLN+LA IA L D R ++ F GV RRF + G + G + D
Sbjct: 274 PGAHNVLNALATIAVATEL--DMR-----FEDIQAGFKSFGGVGRRFQVKGEVNGIMVVD 326
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+ HHPTE++A L AA+ + ++ L+ VFQPH Y+R L ++F A +AD ++++ +
Sbjct: 327 DYGHHPTEIKATLAAAKGGW-DRRLVVVFQPHRYTRTKELFEEFVKAFYDADILILTDI 384
>gi|167580474|ref|ZP_02373348.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia thailandensis
TXDOH]
Length = 465
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 150/425 (35%), Positives = 219/425 (51%), Gaps = 48/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ + G++VSGSDL ++ E L GA + IGH +NI+G
Sbjct: 8 IHFVGIGGAGMSGIAEVLVNLGYQVSGSDLARNAVTERLEALGARVSIGHDAANIEG--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
NAVV S+A+ DN E+L A+ + VPI R LA+L IA++G+HGK+TT S
Sbjct: 65 ---ANAVVVSTAVRSDNPEVLAARRLRVPIVPRAVMLAELMRLKQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL A G D T ++G + + G G V EADE D FL L P + V+TN
Sbjct: 122 LVASVLAAGGLDPTFVIGGRLTS-AGANARLGTGDFIVAEADESDASFLNLYPVIEVITN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D +K F F +++ G V+C D R ++ I +
Sbjct: 181 IDADHMDTYGHDFARLKQAFIEFTQRLPFYGSAVVCIDDANVRQIVPLISK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++ YGF++ AE+V G + + GR + L +
Sbjct: 232 ----------------PVVRYGFAADAQVRAENVEAR-DGRMHFTVLREGREPLPVVLNL 274
Query: 377 PGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC--- 432
PG+HNV N+LA IA L + D ++ L++F GV RRF G I
Sbjct: 275 PGLHNVQNALAAIAIATDLDVADT--------AIQQALAEFNGVGRRFQRYGEIPAAGGG 326
Query: 433 --HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP E+ A + AAR FP + L+ FQPH Y+R DDF N LS D +
Sbjct: 327 AYTLIDDYGHHPVEMAATIAAARGAFPGRRLVLAFQPHRYTRTRDCFDDFVNVLSTVDAL 386
Query: 491 VVSAV 495
V++ V
Sbjct: 387 VLTEV 391
>gi|163814710|ref|ZP_02206099.1| hypothetical protein COPEUT_00861 [Coprococcus eutactus ATCC 27759]
gi|158450345|gb|EDP27340.1| UDP-N-acetylmuramate--L-alanine ligase [Coprococcus eutactus ATCC
27759]
Length = 460
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 150/420 (35%), Positives = 222/420 (52%), Gaps = 41/420 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG +S LA++ LK GF+V+GSD+ S + L + GA ++IG SNI +
Sbjct: 12 VHFMGIGGISMSGLAEILLKAGFKVTGSDMKASEITDQLADMGALINIGQRASNITDS-- 69
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTTA 196
+ VV ++AI DN E A G+P+ R L ++ E Y IAVSG+HGK+TT
Sbjct: 70 ---IDLVVYTAAIHPDNEEFKAAVEKGIPMLTRAQLLGQIMENYKYSIAVSGTHGKTTTT 126
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SML+Y+L D T VG + G+I G + FV EA EY + P ++++
Sbjct: 127 SMLSYILIDADTDPTISVGGILDSIG-GNIRVGKSEYFVTEACEYTNSYHAFKPFISIIL 185
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N+D +H+D F+D D + F F + G +++ GD ++Y
Sbjct: 186 NVDADHLDFFKDIDEIAESFHVFATKTPKEGLVIVNGD----------------MEYYDT 229
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
VV + +I+T+G + N + A ++ + G Y L G+ + I+L++
Sbjct: 230 VVRDLEC---------RIVTFGKGTQNKYSAHNIRFDDLGHPTYTLVVDGKEVTDITLRV 280
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY-GCHIY 435
G HNV NSL+ IA L L SI +K LS+ +G RRF+ GTI +
Sbjct: 281 FGEHNVYNSLSAIAAALEL-------GISIDVIKQGLSECVGAERRFEYKGTILDNVRVM 333
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHPTE+ A L+AA+ N+ L VFQPHTYSR L D+FA AL D V+V+ +
Sbjct: 334 DDYAHHPTEISATLKAAQNTSYNE-LWCVFQPHTYSRTYALFDEFAEALKVCDHVIVADI 392
>gi|373454593|ref|ZP_09546459.1| UDP-N-acetylmuramate-alanine ligase [Dialister succinatiphilus YIT
11850]
gi|371935868|gb|EHO63611.1| UDP-N-acetylmuramate-alanine ligase [Dialister succinatiphilus YIT
11850]
Length = 466
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 153/458 (33%), Positives = 236/458 (51%), Gaps = 58/458 (12%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
HF+GIGG G+ ALA++ L++G+ VSGSD+ S +E + GA++ IGH S+++G
Sbjct: 10 HFIGIGGMGMRALAEILLEKGYSVSGSDMADSPVLENFRKRGASIFIGHDASHVKGE--- 66
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
VV SSAI +DN E++ A+ +P++ R LA L I+V+G+HGKSTT+ M
Sbjct: 67 ---GCVVISSAISEDNPELMEARRKQIPVFHRSDVLAALLLAGKGISVAGAHGKSTTSGM 123
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
L + D T ++GA + G+ G G+ + EADE DG FL + VVTN+
Sbjct: 124 LGQIFYETAMDPTIVLGA-AADYIHGNSICGKGEYVIAEADESDGSFLKFKNYITVVTNI 182
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQIRV-GGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+ +H+D + + ++ F F+ I G +C DS+ R++L I +
Sbjct: 183 EDDHLDHYGSVENIRKAFAEFVNHISYDDGAAFLCLDSEGVRAILPSIHK---------- 232
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILC----ERGRPLAQIS 373
K+ T+G + D A V P + + +LC + G+ L +
Sbjct: 233 ---------------KVFTFGLNEKADLRA--VNPRYE---NRLLCYEAVKGGKVLGTVR 272
Query: 374 LQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH 433
LQ+PG+HNV +SL +A L ++ +I S F GV RRF+
Sbjct: 273 LQVPGLHNVRDSLGALAASLYCGIPFEKAAAAI-------SHFHGVKRRFETKLRTEDLW 325
Query: 434 IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVS 493
I DD+AHHPTE++A L+AAR+ N ++ FQPH YSR +LKD+FA A +AD
Sbjct: 326 IVDDYAHHPTEIKATLKAARES-GNHRILCAFQPHRYSRTKLLKDEFAEAFDDAD----- 379
Query: 494 AVLVFWLIIFAVSSFWLIMAINSVIC-IVRSMLPEKQM 530
++F+ I+A S + +I VR+ LP K +
Sbjct: 380 --VLFFTDIYAASEEKIPGVDGHLIPDAVRARLPHKDI 415
>gi|410090432|ref|ZP_11287027.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas viridiflava
UASWS0038]
gi|409762260|gb|EKN47283.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas viridiflava
UASWS0038]
Length = 486
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 156/429 (36%), Positives = 220/429 (51%), Gaps = 49/429 (11%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG G+ +A++ L G+EVSGSDL S E L GA + +GH N
Sbjct: 15 RIRRIHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKSSPVTERLESFGAQIFLGHRAENTM 74
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
G D +V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+
Sbjct: 75 GAD------VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKT 128
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S++A V A G D T ++G + + G + + EADE D FL L P VA
Sbjct: 129 TTTSLIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVA 187
Query: 254 VVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
VVTN+D +H+ +E D + +K F FL + G V+C D R +L Q+K+
Sbjct: 188 VVTNIDADHMATYEGDFNKLKKTFVEFLHNLPFYGLAVMCIDDPVVREILPQVKR----- 242
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLA 370
I+TYGFS D A +V Q G + + + R R
Sbjct: 243 --------------------PILTYGFSEEADVRAINVR---QDGMLTFFTVLRRDREPL 279
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+S+ +PG HNVLNSLA IA + D+ S E+I LS F GV RRF + G +
Sbjct: 280 DVSVNMPGNHNVLNSLATIA----IATDEGVSDEAIVQ---GLSGFQGVGRRFQVYGELP 332
Query: 431 ----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
+ DD+ HHP EV AV+ A R +P++ L+ V+QPH +SR L DDF L++
Sbjct: 333 VEGGNVMLVDDYGHHPREVAAVINAVRGGWPDRRLVMVYQPHRFSRTRDLYDDFVQVLAD 392
Query: 487 ADQVVVSAV 495
A+ +++ V
Sbjct: 393 ANVLLLMEV 401
>gi|407697309|ref|YP_006822097.1| UDP-N-acetylmuramate--L-alanine ligase [Alcanivorax dieselolei B5]
gi|407254647|gb|AFT71754.1| UDP-N-acetylmuramate--L-alanine ligase [Alcanivorax dieselolei B5]
Length = 488
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 147/427 (34%), Positives = 219/427 (51%), Gaps = 47/427 (11%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
+V R IHFVGIGG+G+ +A++ QG++VSGSD+ S + L G + IGH
Sbjct: 21 VVPEMRRIRGIHFVGIGGAGMCGIAEVLANQGYQVSGSDIKESPVVVRLRRLGVRVDIGH 80
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
NI+ D VV S+A+ +NVE+ A + +P+ R LA+L + IAV+
Sbjct: 81 RAENIEDAD------VVVTSTAVSTENVEVARAHELRIPVVPRAQMLAELMRFRHGIAVA 134
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT SM+A +L G D T ++G + + G + V EADE D FL
Sbjct: 135 GTHGKTTTTSMVAAILGEAGLDPTFVIGGRLNSAGTNARL-GQSRYLVAEADESDASFLH 193
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDA-VKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 306
L P A+VTN+D +H+ + + A +++ F FL + G V+C D R LL ++
Sbjct: 194 LQPMSAIVTNIDADHMHTYGGDFARLENTFIEFLHNLPFYGVAVMCIDDPVVRRLLPRVN 253
Query: 307 QDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERG 366
+ ++I YGF D AE+V + ++ G
Sbjct: 254 R-------------------------QVIRYGFDEDADLRAEAVSAHGMSTRFRVVRAEG 288
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
PL +I+L +PG HN+LN+LA IA + D+ E+I L+ F GV RRFD++
Sbjct: 289 EPL-EITLNMPGRHNILNALAAIA----VASDEGAPDEAIV---RALNGFAGVGRRFDVL 340
Query: 427 GTIYGCH-----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFA 481
G Y C + DD+ HHP EV A + A R+ +P + L+ +FQPH Y+R L +DF
Sbjct: 341 GK-YPCQGGAATLVDDYGHHPREVAATVAAIREGWPQRRLVMLFQPHRYTRTQDLYEDFV 399
Query: 482 NALSEAD 488
LS D
Sbjct: 400 EVLSRVD 406
>gi|336425961|ref|ZP_08605975.1| UDP-N-acetylmuramate-L-alanine ligase [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336011426|gb|EGN41386.1| UDP-N-acetylmuramate-L-alanine ligase [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 459
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 155/428 (36%), Positives = 225/428 (52%), Gaps = 41/428 (9%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
VDF N I+F+GIGG +S LA++ L +GF VSGSD SS E L + GA +H G
Sbjct: 4 VDF-NHPVHIYFIGIGGISMSGLAEILLSEGFRVSGSDAKKSSLTELLEKQGAVVHYGQR 62
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVS 187
NI ND + +V ++AI +DN E + +G+P R L ++ Y I VS
Sbjct: 63 RENIT-ND----IDLIVYTAAIHKDNPEFAAMEELGLPSLTRAQLLGQMMRNYKTPIGVS 117
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT SM+ +L A G D T VG + G+I G FV EA EY FL
Sbjct: 118 GTHGKTTTTSMITEILLAAGTDPTISVGGILKSI-QGNIRVGKSDLFVTEACEYTNSFLS 176
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P + ++ N++ +H+D F D D ++S FRRF + + G L+I GD + D +
Sbjct: 177 FYPRIGIILNIEEDHLDFFRDLDDIRSSFRRFAQLLPEDGLLIISGD------ISDYEEI 230
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR 367
GL S ++T+G S D+Y + + + + + L RG
Sbjct: 231 TRGLSCS-------------------VLTFGSDSSCDYYYDGISHDEFAHASFTLHRRGG 271
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
+SL +PG HN+LN+LA +A L D + + L F G RRF+ G
Sbjct: 272 SDIPVSLGVPGEHNILNALAALALADYLKLDMETAARA-------LKNFTGTDRRFEYKG 324
Query: 428 TIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
++ G I DD+AHHPTE+ A L+AAR +P++ L VFQPHTY+R +FA ALS A
Sbjct: 325 SVEGITIVDDYAHHPTEITATLKAARN-YPHQTLWCVFQPHTYTRTKAFLPEFAQALSLA 383
Query: 488 DQVVVSAV 495
D+V+++ +
Sbjct: 384 DKVILADI 391
>gi|389576667|ref|ZP_10166695.1| UDP-N-acetylmuramate--alanine ligase [Eubacterium cellulosolvens 6]
gi|389312152|gb|EIM57085.1| UDP-N-acetylmuramate--alanine ligase [Eubacterium cellulosolvens 6]
Length = 462
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 143/437 (32%), Positives = 224/437 (51%), Gaps = 41/437 (9%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
++ +HF+GIGG +S LA + L +GF VSGSD + L AGA + + NI
Sbjct: 7 DKPCHLHFIGIGGISMSGLAAILLNEGFTVSGSDTHETDLTNRLTAAGAKISYTQTTENI 66
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHG 191
+ + VV ++AI N E A +P+ R L ++ + Y + I VSG+HG
Sbjct: 67 TDD-----IDVVVYTAAIHPSNPEYAAAVEKNIPLLTRAQLLGEMMKSYKIPICVSGTHG 121
Query: 192 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPS 251
K+TT SM ++VL A + T VG +P G+ G F++EA EY FL P
Sbjct: 122 KTTTTSMASHVLMAADKNPTISVGGILPLI-KGNYHIGNTDTFLMEACEYTNSFLDFFPK 180
Query: 252 VAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
++++ ++D +H+D F+D + +++ FR+F + + G L+I D + +
Sbjct: 181 ISIILDIDADHLDFFKDLEDIRNSFRKFAELLPADGTLIINADDPAFKMI---------- 230
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQ 371
+ DL + +ITY S+ ++ A+ + + G + + +G P+
Sbjct: 231 ----------TKDLPCE-----VITYSLSNIGNYTADMITYDELGHASFRALYKGEPIGN 275
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG 431
+LQ+PG HNV N+LAVIA L D ++ F G +RRF+ G + G
Sbjct: 276 FALQVPGSHNVSNALAVIALAEKLGIDAD-------TIQKGFDSFHGTNRRFEQKGEMNG 328
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+AHHPTE++A L AR R P+K + VFQPHTY+R L FA ALS AD VV
Sbjct: 329 ATVIDDYAHHPTEIKATLNTAR-RVPHKTIWCVFQPHTYTRTKSLLPQFAEALSIADHVV 387
Query: 492 VSAVLVFW-LIIFAVSS 507
++ + L I+ +SS
Sbjct: 388 LADIYAARELDIYGISS 404
>gi|322421361|ref|YP_004200584.1| UDP-N-acetylmuramate--L-alanine ligase [Geobacter sp. M18]
gi|320127748|gb|ADW15308.1| UDP-N-acetylmuramate/alanine ligase [Geobacter sp. M18]
Length = 461
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 147/419 (35%), Positives = 221/419 (52%), Gaps = 42/419 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+S +A++ L G++VSGSDL S + L G + IGH+ N+ D
Sbjct: 8 IHFVGIGGIGMSGIAEVLLNLGYKVSGSDLRSSDTTQRLESLGGEIFIGHAAENVAQAD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSA+ +DN E++ A +P+ R LA+L +AV+G+HGK+TT S
Sbjct: 67 -----VVVISSAVHEDNPEVVEAHLRLIPVIPRAEMLAELMRMKYGVAVAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A +L G D T ++G + + G G+ V EADE DG FL LSP++AVVTN
Sbjct: 122 MVATLLAKGGIDPTMVIGGRLNSLGSNARL-GQGQFLVAEADESDGSFLLLSPTIAVVTN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D +H+D + + +K F F+ ++ G V+C D+ +L ++K+
Sbjct: 181 IDADHLDFYSGIEEIKDTFVEFINKVPFYGLAVLCLDNGNIADILPRVKK---------- 230
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPLAQISLQI 376
+ +YG S+ D+ A V + G + ++ +G L +I+ +
Sbjct: 231 ---------------RFTSYGLSAQADFRATDV--RLSGFSTSFVAHHKGVKLGEITFSM 273
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG HNVLN+LA IA + L ++ F GV RRF L G + G + D
Sbjct: 274 PGAHNVLNALAAIAVAMEL-------DIPFETIQEGFKAFGGVGRRFSLKGEVNGIMVVD 326
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+ HHPTE+RA L AA+ F L+ VFQPH YSR L +DF A +AD ++++ +
Sbjct: 327 DYGHHPTEIRATLAAAKAGFAENRLVVVFQPHRYSRTKELFEDFVKAFHDADVLILTDI 385
>gi|257483446|ref|ZP_05637487.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
gi|422596839|ref|ZP_16671118.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|422682237|ref|ZP_16740504.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
gi|330987135|gb|EGH85238.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331011578|gb|EGH91634.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
Length = 486
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 155/425 (36%), Positives = 220/425 (51%), Gaps = 49/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G+EVSGSDL S+ E L GA + +GH N G D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKGSAVTERLESFGAQIFVGHRAENTVGAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 78 -----VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ +E D + +K F FL + G V+C D R +L Q+K+ T
Sbjct: 192 IDADHMATYEGDFNKLKKTFVEFLHNLPFYGLAVMCIDDPVVREILPQVKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLAQISL 374
+TYGFS D A +V Q G + + + R R +S+
Sbjct: 245 ------------------LTYGFSESADIRAINVR---QDGMLTFFTVLRRDREPLDVSV 283
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY---- 430
+PG HNVLNSLA IA + D+ S E+I LS F GV RRF + G +
Sbjct: 284 NMPGNHNVLNSLATIA----IATDEGVSDEAIVQ---GLSGFQGVGRRFQVYGELPVEGG 336
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP EV AV+ A R +P++ L+ V+QPH +SR L DDF L++A+ +
Sbjct: 337 NVMLVDDYGHHPREVAAVISAVRGGWPDRRLVMVYQPHRFSRTRDLYDDFVQVLADANVL 396
Query: 491 VVSAV 495
++ V
Sbjct: 397 LLMEV 401
>gi|375085834|ref|ZP_09732456.1| UDP-N-acetylmuramate-alanine ligase [Megamonas funiformis YIT
11815]
gi|374566319|gb|EHR37564.1| UDP-N-acetylmuramate-alanine ligase [Megamonas funiformis YIT
11815]
Length = 455
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 145/420 (34%), Positives = 226/420 (53%), Gaps = 44/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HFVGIGG G+SA+A++ L +G+E+SGSDL S+ ++ L GA ++ GH N++G +
Sbjct: 8 LHFVGIGGVGMSAIAEVMLDKGYEISGSDLSESAVVKHLKAKGATIYKGHDALNVEGKE- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
A+V SSAI QDN E++ AK+ G+ ++ R LA L IAV+G+HGK+TT+S
Sbjct: 67 -----ALVLSSAIHQDNPELVAAKAKGLKLFHRSDILAYLLNDAKGIAVAGAHGKTTTSS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M++ VL+ D T ++G V + G+ G V EADE DG FL P +AVVTN
Sbjct: 122 MISVVLEHAKVDPTILIGGFV-DYLKGNAKLGKSDYLVAEADESDGSFLKFYPKIAVVTN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQI-RVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
++ +H+D + + + F +F++ + + G V+C D++ R++ D++
Sbjct: 181 IEDDHMDHYGSMENIIKAFIQFVQNLDKETGLAVLCFDNENIRNIADKV----------- 229
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPLAQISLQ 375
D K I+Y D+ A+ + + G + + + +G L ++L
Sbjct: 230 --------------DRKYISYALDHDADYMAKDI--KIDGPHTSFTVIYKGEVLGDVALN 273
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
IPG HNVLN+LA IA SI + F G RRF I
Sbjct: 274 IPGKHNVLNALATIAVC-------HHMGLSIEEIAEGFKVFSGTKRRFQTKFRNENVWIV 326
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHPTE++ ++AA+Q P K LI FQPH YSR +L+ +F + AD +V++ +
Sbjct: 327 DDYAHHPTEIQTTIKAAKQTNP-KRLIVAFQPHRYSRTQLLQKEFGSCFVGADVLVLTDI 385
>gi|53726037|ref|YP_104093.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia mallei ATCC
23344]
gi|67643628|ref|ZP_00442373.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia mallei GB8 horse
4]
gi|121599536|ref|YP_991820.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia mallei SAVP1]
gi|124384790|ref|YP_001027313.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia mallei NCTC
10229]
gi|126449994|ref|YP_001082750.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia mallei NCTC
10247]
gi|251766632|ref|ZP_04819734.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia mallei PRL-20]
gi|254178949|ref|ZP_04885603.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia mallei ATCC
10399]
gi|254202814|ref|ZP_04909177.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia mallei FMH]
gi|254208156|ref|ZP_04914506.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia mallei JHU]
gi|254357640|ref|ZP_04973914.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia mallei
2002721280]
gi|59798163|sp|Q62GS8.1|MURC_BURMA RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|166222963|sp|A3MR64.1|MURC_BURM7 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|166222964|sp|A2S5U4.1|MURC_BURM9 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|166222965|sp|A1V0R7.1|MURC_BURMS RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|52429460|gb|AAU50053.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia mallei ATCC
23344]
gi|121228346|gb|ABM50864.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia mallei SAVP1]
gi|124292810|gb|ABN02079.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia mallei NCTC
10229]
gi|126242864|gb|ABO05957.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia mallei NCTC
10247]
gi|147747061|gb|EDK54138.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia mallei FMH]
gi|147752050|gb|EDK59117.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia mallei JHU]
gi|148026704|gb|EDK84789.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia mallei
2002721280]
gi|160694863|gb|EDP84871.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia mallei ATCC
10399]
gi|238525007|gb|EEP88437.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia mallei GB8 horse
4]
gi|243065315|gb|EES47501.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia mallei PRL-20]
Length = 465
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 151/425 (35%), Positives = 220/425 (51%), Gaps = 48/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ + G++VSGSDL ++ E L GA + IGH +NI+G
Sbjct: 8 IHFVGIGGAGMSGIAEVLVNLGYQVSGSDLARNAVTERLEALGARVSIGHDAANIEG--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
NAVV S+A+ DN E+L A+ + VPI R LA+L IA++G+HGK+TT S
Sbjct: 65 ---ANAVVVSTAVRSDNPEVLAARRLRVPIVPRAVMLAELMRLKQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL A G D T ++G + + G G V EADE D FL L P + V+TN
Sbjct: 122 LVASVLAAGGLDPTFVIGGRLTS-AGANARLGMGDFIVAEADESDASFLNLYPVIEVITN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D +K F F +++ G V+C D R ++ I +
Sbjct: 181 IDADHMDTYGHDFARLKQAFIEFTQRLPFYGSAVVCIDDANVRQIVPLISK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++ YGF++ AE+V G + + GR + L +
Sbjct: 232 ----------------PVVRYGFAADAQVRAENVEAR-DGRMHFTVRREGREPLPVVLNL 274
Query: 377 PGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH-- 433
PG+HNV N+LA IA L + D A ++ L++F GV RRF G I
Sbjct: 275 PGLHNVQNALAAIAIATDLDVAD--------AAIQQALAEFNGVGRRFQRYGEIAAAGGG 326
Query: 434 ---IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP E+ A + AAR FP + L+ FQPH Y+R DDF N LS D +
Sbjct: 327 AYTLIDDYGHHPVEMAATIAAARGAFPGRRLVLAFQPHRYTRTRDCFDDFVNVLSTVDAL 386
Query: 491 VVSAV 495
V++ V
Sbjct: 387 VLTEV 391
>gi|452911193|ref|ZP_21959864.1| UDP-N-acetylmuramate-alanine ligase [Kocuria palustris PEL]
gi|452833619|gb|EME36429.1| UDP-N-acetylmuramate-alanine ligase [Kocuria palustris PEL]
Length = 485
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 154/430 (35%), Positives = 218/430 (50%), Gaps = 35/430 (8%)
Query: 60 TFKRNEECIVDFKNRK-GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLE 118
T NE VD G H +GIGG+G+SA+A+L L G VSGSD S + L E
Sbjct: 7 TGSPNESMGVDTDPAGLGPTHLIGIGGAGMSAVARLLLAHGVSVSGSDAQESRGLAALRE 66
Query: 119 AGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLT 178
GA + IG + NI VV S+AI + N E+ A+ G+ + R L
Sbjct: 67 RGARISIGQAAENIAD------ARTVVVSTAIRETNPELAAAREAGLRVLHRSQALGVAM 120
Query: 179 EKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEA 238
++AV+G+HGK+TT+SM A L+ G + + +GAHV + G G+ FV EA
Sbjct: 121 HGSQVVAVAGTHGKTTTSSMAAVALQESGQEPSWAIGAHVADLGT-NAHLGRGRWFVAEA 179
Query: 239 DEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCA 298
DE DG FL +P++AVVTN++ +H+D + E+A F F +R GG LV C D +
Sbjct: 180 DESDGSFLSYAPTIAVVTNIEPDHLDHYGSEEAFFQAFEDFADTLRPGGTLVACQDDSGS 239
Query: 299 RSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS 358
R L + +++ GG V +D Q I T G + + ++ G+
Sbjct: 240 RRLAEAVRR------RGGSVVTYGTDAAAQIRVSDIRTEGIGATAEL-------SLGEGA 286
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
D + R R L++PG HNVLN+ A A V + G + L+ L+ F G
Sbjct: 287 D-LRSHRMR------LEVPGEHNVLNAAAAFA-VTQIAGVPAED-----ALR-GLAGFHG 332
Query: 419 VSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKD 478
RRF+L G G + DD+AHHPTEVRA L AAR+ ++ +FQPH +SR
Sbjct: 333 SDRRFELKGEARGVRVIDDYAHHPTEVRAALTAARRVAGEDRVLVLFQPHLFSRTQAFAG 392
Query: 479 DFANALSEAD 488
+FA AL AD
Sbjct: 393 EFAQALEIAD 402
>gi|118581688|ref|YP_902938.1| UDP-N-acetylmuramate--L-alanine ligase [Pelobacter propionicus DSM
2379]
gi|166224713|sp|A1AU60.1|MURC_PELPD RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|118504398|gb|ABL00881.1| UDP-N-acetylmuramate--L-alanine ligase [Pelobacter propionicus DSM
2379]
Length = 460
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 152/419 (36%), Positives = 225/419 (53%), Gaps = 41/419 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+S +A++ L G++VSGSDL S E L GA + IGH N++ D
Sbjct: 8 IHFVGIGGIGMSGIAEVLLNLGYKVSGSDLRGSDITERLARLGAEIGIGHKADNLKDVD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSA+ DN E++ AK + VP+ R LA+L IA++G+HGK+TT S
Sbjct: 67 -----VVVISSAVHDDNPEVVEAKRLHVPVIPRAEMLAELMRMKFGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M A +L G D T ++G + + G GK + EADE DG FL LSP++AVVTN
Sbjct: 122 MAASILGHAGIDPTIVIGGKLNAIGTNAQL-GQGKFLLAEADESDGSFLVLSPTIAVVTN 180
Query: 258 LDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + + +K F +F+ ++ G V+C D R++L ++K+
Sbjct: 181 IDADHLDHYSGGIEEIKDTFVKFINKVPFYGMAVLCLDDPNIRAILPRVKK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+ +TYG SS D A V + + + +G L +IS +
Sbjct: 232 ----------------RYMTYGLSSQADIRATHVRHD-GFTTSFTAHFKGYRLGEISFTM 274
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG HNVLN++A IA L L + ++ S+F GV RRF + G G + D
Sbjct: 275 PGAHNVLNAMACIAVALEL-------DVPFSAIQEGFSRFGGVGRRFTIKGEPRGITVVD 327
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+ HHP E++A L AAR +P + ++AVFQPH Y+R L +F A +AD ++++ V
Sbjct: 328 DYGHHPAEIKATLAAARLGWPERRIVAVFQPHRYTRTHELFGEFVTAFYDADVLILTDV 386
>gi|398852593|ref|ZP_10609245.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM80]
gi|398243682|gb|EJN29264.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM80]
Length = 486
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 158/428 (36%), Positives = 221/428 (51%), Gaps = 47/428 (10%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG G+ +A++ L G+EVSGSDL S E L GA+++IGH N
Sbjct: 15 RIRRIHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKASPVTERLESFGAHIYIGHRAENAA 74
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
D +V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+
Sbjct: 75 TAD------VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKT 128
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S++A V A G D T ++G + + G + + EADE D FL L P VA
Sbjct: 129 TTTSLIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVA 187
Query: 254 VVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
VVTN+D +H+ ++ D + +K F FL + G V+C D R +L +K+ T
Sbjct: 188 VVTNIDADHMATYDGDFNKLKKTFVEFLHNLPFYGLAVMCLDDPVVREILPLVKRPT--- 244
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER-GRPLAQ 371
+TYGFS D A +V QG + R R
Sbjct: 245 ----------------------VTYGFSEDADVRAINV--RQQGMQTFFTVLRPDREPLD 280
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG--TI 429
+S+ +PG HNVLNSLA I + D+ S E+I LS F GV RRF + G +
Sbjct: 281 VSVNMPGNHNVLNSLATIC----IATDEGVSDEAIVQ---GLSGFQGVGRRFQVYGELPV 333
Query: 430 YGCHIY--DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
G H+ DD+ HHPTEV AV++A R +P + L+ V+QPH YSR L DDF N L++A
Sbjct: 334 DGGHVMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVNVLADA 393
Query: 488 DQVVVSAV 495
+ +++ V
Sbjct: 394 NVLLLMEV 401
>gi|342215263|ref|ZP_08707913.1| UDP-N-acetylmuramate--L-alanine ligase [Veillonella sp. oral taxon
780 str. F0422]
gi|341588649|gb|EGS32034.1| UDP-N-acetylmuramate--L-alanine ligase [Veillonella sp. oral taxon
780 str. F0422]
Length = 768
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 141/419 (33%), Positives = 219/419 (52%), Gaps = 43/419 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH +GI GSG+ A+A + +++GF VSGSD+ S+ E +AGA + +GH ++++G D
Sbjct: 8 IHLIGIAGSGMRAIAHVLIEKGFIVSGSDIQESAITEKFRQAGATIFMGHDAAHVEGVD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKR-DYWLAKLTEKYNLIAVSGSHGKSTTA 196
V+ S+AI DN EI+ A+ +PI R D A L E Y IAV+G+HGK+TT
Sbjct: 67 -----VVIRSTAINDDNPEIVGARERNIPILHRSDVVKAVLDETYG-IAVAGAHGKTTTT 120
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM+ + D T I+G V + +GS G GK + EADE DG FL L+P V+T
Sbjct: 121 SMIGQIFMEANQDPTIIIGGEV-DYLNGSSHVGTGKYSIAEADESDGSFLHLNPKRIVIT 179
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D + + + F F ++ G V+CGD+ R ++ IK+
Sbjct: 180 NIENDHMDHYRTVENLLRAFTEFSMKLPEDGIAVVCGDNPSIRRIMPDIKR--------- 230
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+ ITYG + ND+ +++ QG + + + + L + L +
Sbjct: 231 ----------------QCITYGLGAGNDYRIDNLRIE-QGITTFEVVHKDAVLGTLRLAV 273
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG HN LN+L + L S L KF+G RRF+ G + + D
Sbjct: 274 PGQHNALNALGALVVALG-------EGISFEVAAQALRKFIGAKRRFETKGHVKDVWVVD 326
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHPTE+ A ++AA+ ++ +I +FQPH YSR +L +F A EAD V ++ +
Sbjct: 327 DYAHHPTEIAATIKAAKSLEDHRVVI-LFQPHRYSRTKLLLREFGTAFKEADLVFITDI 384
>gi|197303947|ref|ZP_03168979.1| hypothetical protein RUMLAC_02684 [Ruminococcus lactaris ATCC
29176]
gi|197296915|gb|EDY31483.1| UDP-N-acetylmuramate--L-alanine ligase [Ruminococcus lactaris ATCC
29176]
Length = 458
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 145/419 (34%), Positives = 220/419 (52%), Gaps = 40/419 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG +S LA++ L++GF VSGSD S + L GA +H G NI +
Sbjct: 12 IHFIGIGGISMSGLAEILLEEGFTVSGSDAKESPLTKKLESEGAVIHYGQCAENITDD-- 69
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTTA 196
N VV ++AI + N E++ A +P+ R L +L + Y+ IAVSG+HGK+TT
Sbjct: 70 ---INCVVYTAAINKSNPELMEAVGKKIPMLTRAELLGQLMKNYDTPIAVSGTHGKTTTT 126
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM++ VL A D T VG + + G+I G NF+ EA EY FL P ++V+
Sbjct: 127 SMISEVLLAADMDPTISVGG-ILKTIGGNIRVGKSGNFITEACEYTNSFLHFYPKISVIL 185
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F+D + ++ F +F + G L+I GD + + +
Sbjct: 186 NIEEDHLDFFKDLEDIRHSFHQFSALLPSDGTLIINGDIKDYQEIY-------------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+G D +ITYG S+ D+ A + + +G + L + ++ L +
Sbjct: 232 -----------EGLDCNVITYGSSAEFDYSATEIQYDEKGFVSFELLKHNTSCGRVQLSV 280
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
G HNV N+LA IAT L+G + ++ L F G RRF+ GT G + D
Sbjct: 281 TGDHNVSNALAAIATA-ELLGIPMDT------IRKGLLSFSGTDRRFEYKGTFNGVTVVD 333
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHPTE+ A L+AA Q +P+ + VFQPHTY+R +FA ALS D +V++ +
Sbjct: 334 DYAHHPTEIAATLKAA-QHYPHNEIWCVFQPHTYTRTKAFFHEFAEALSHTDHLVLADI 391
>gi|239628388|ref|ZP_04671419.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239518534|gb|EEQ58400.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 479
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 145/428 (33%), Positives = 227/428 (53%), Gaps = 39/428 (9%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DF + +HF+GIGG +S LA++ L++GF V+GSD + + L + GA ++ G
Sbjct: 22 IDF-GKPEHVHFIGIGGISMSGLAEILLEEGFTVTGSDSHETGLTDHLTDRGARVYYGQR 80
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVS 187
+NI+ G + VV ++AI +DN E + K G+P+ R L ++ Y +AVS
Sbjct: 81 AANIEKEPGI---DVVVYTAAIHEDNPEFMAVKEKGIPMLSRAELLGEMMRNYKQAVAVS 137
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT SM+ +L A D T VG + Q G+I G + FV EA EY FL
Sbjct: 138 GTHGKTTTTSMITDILLAGNLDPTISVGG-ILQDIGGNIRVGSPELFVTEACEYTNSFLS 196
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P++ V+ N++ +H+D F+D ++ FR F +++ G LVI S +D +++
Sbjct: 197 FHPTMEVILNIEEDHLDFFKDIQDIRHSFRLFAEKLPSRGLLVI-------NSGIDAVEE 249
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR 367
T +G +++T+G S + + A+ + + Y L +G
Sbjct: 250 IT------------------KGLGCRVVTFGKDSSSTYTAKDITYDGFARPSYDLVIQGE 291
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
+ +I+L + G HNV NSLA IA + L + L KF G RRF+ G
Sbjct: 292 VVNRITLGVTGEHNVYNSLAAIAVAMEL-------GAGFDAVMAGLRKFTGTDRRFEKKG 344
Query: 428 TIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
I G I DD+AHHP E++A L AA+ +P++ L VFQPHTY+R D FA LS A
Sbjct: 345 EIGGITIIDDYAHHPQEIKATLSAAKN-YPHRKLWCVFQPHTYTRTKAFLDQFAETLSAA 403
Query: 488 DQVVVSAV 495
D+V+++ +
Sbjct: 404 DEVILADI 411
>gi|39936591|ref|NP_948867.1| UDP-N-acetylmuramate--L-alanine ligase [Rhodopseudomonas palustris
CGA009]
gi|48428302|sp|P61682.1|MURC_RHOPA RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|39650447|emb|CAE28970.1| UDP-N-acetylmuramate-alanine ligase [Rhodopseudomonas palustris
CGA009]
Length = 467
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 159/429 (37%), Positives = 230/429 (53%), Gaps = 52/429 (12%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G+ V GSD S+ + L E G +H+GH NI+G
Sbjct: 8 GPIHFVGIGGIGMSGIAEVLCNLGYTVQGSDASESANVNRLREKGIQIHVGHQADNIKGA 67
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D +V S+AI +DN E+L A++ +P+ +R LA+L + +A++G+HGK+TT
Sbjct: 68 D------VLVVSTAIKRDNPELLAARAQRIPVVRRAEMLAELMRLKSCVAIAGTHGKTTT 121
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L A D T I G + + + GGG V+EADE DG FL L VA+V
Sbjct: 122 TSMVAALLDAGDLDPTVINGGIINAYGTNARL-GGGDWMVVEADESDGTFLKLPADVAIV 180
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D F+ DAV+ FR F++ + G V+C D ++L+ +I+
Sbjct: 181 TNVDPEHLDHFKTFDAVQDAFRNFVENVPFYGFAVMCIDHPVVQTLVGKIE--------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR------PL 369
D +IITYG + D + + GGS + + R R +
Sbjct: 232 ---------------DRRIITYGENPQADARLLDLAAS-GGGSTFKVAFRDRKAGTAHEI 275
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHE---SIACLKLPLSKFMGVSRRFDLI 426
A + L +PG HN LN+ A IA +HE S ++ L+ F GV RRF
Sbjct: 276 ADLKLPMPGRHNALNATAAIAV----------AHELGLSDDTIRKALAAFGGVRRRFTKT 325
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G G I DD+ HHP E+ AVL+AARQ K +IAV QPH +SRL L ++F ++
Sbjct: 326 GEWNGVTIIDDYGHHPVEIAAVLKAARQSTAGK-VIAVVQPHRFSRLQSLFEEFCTCFND 384
Query: 487 ADQVVVSAV 495
AD V+V+ V
Sbjct: 385 ADAVIVADV 393
>gi|15606557|ref|NP_213937.1| UDP-N-acetylmuramate-alanine ligase [Aquifex aeolicus VF5]
gi|6919927|sp|O67373.1|MURC_AQUAE RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|2983764|gb|AAC07323.1| UDP-N-acetylmuramate-alanine ligase [Aquifex aeolicus VF5]
Length = 454
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 148/425 (34%), Positives = 226/425 (53%), Gaps = 40/425 (9%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
+ R HF+GIGG G+S +A++ L+ G++VSGSD+ + + L + GA ++IGH
Sbjct: 2 LRERIKKFHFIGIGGIGMSGIAQILLEMGYKVSGSDISENKNTKLLKQKGAKIYIGHRPE 61
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N+ VV SSA+ DN EI AK +P+ R LA+L + IAVSGSH
Sbjct: 62 NLGD------AQVVVYSSAVKPDNPEIQEAKRRNIPVIPRGEMLAELFKLKEGIAVSGSH 115
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT SM+A +L G + T I+G + + + G G+ V EADE DG FL L P
Sbjct: 116 GKTTTTSMIAEILINAGLEPTVIIGGRLKRLGTNAKL-GRGELLVSEADESDGSFLKLQP 174
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
+VAV+TN+D EH+D +E+ + VK F +F+ + G V+ D L+ +
Sbjct: 175 AVAVITNVDKEHLDFYENFERVKEAFEQFMNSVPFYGFAVVNLDDPTLAQLVKK------ 228
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
H+ ++ITYG +S A+++ +G ++ + +G+ L
Sbjct: 229 ------------------SHE-RVITYGINSPALVRAKNLYLK-EGRYEFGVEFKGKELG 268
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+I L I G+HNV N+LA L L S +K L +F RR +L G
Sbjct: 269 RIHLGIAGIHNVYNALAATGVALEL-------GVSFEVIKKSLEEFRNAERRLELKGYYK 321
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+YDD+ HHPTE++AV+ + R +P+K L+ VFQPH YSR L +DF L + D++
Sbjct: 322 NSPVYDDYGHHPTEIKAVINSLRDMYPDKNLLVVFQPHRYSRTYYLFEDFVKVLKDIDKL 381
Query: 491 VVSAV 495
+V+ +
Sbjct: 382 IVTDI 386
>gi|339010726|ref|ZP_08643296.1| UDP-N-acetylmuramate--L-alanine ligase [Brevibacillus laterosporus
LMG 15441]
gi|338772881|gb|EGP32414.1| UDP-N-acetylmuramate--L-alanine ligase [Brevibacillus laterosporus
LMG 15441]
Length = 468
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 143/426 (33%), Positives = 226/426 (53%), Gaps = 51/426 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HFVGIGG G+S +A++ + G++V+GSD+ + L E GA + IGH S+I G D
Sbjct: 7 VHFVGIGGYGMSGIARVLVDLGYKVTGSDVAMNDLARKLQEKGAQVIIGHDASHIDGAD- 65
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV S++I ++N E+ A G+P+ R LAK+ + +AV+G+HGK+TT S
Sbjct: 66 -----IVVYSTSISKENPEVAAALEKGIPLLHRSQMLAKILNERTGVAVAGAHGKTTTTS 120
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVT 256
M A++L+A G+D T I+G + G+ G ++V+ EADE DG F P+ A+VT
Sbjct: 121 MTAHILEACGEDPTFIIGGELVNA--GTNAKAGKSDYVVAEADESDGSFKEYHPAYAIVT 178
Query: 257 NLDWEHVDIFEDEDA-VKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
N++ +H++ F+ + A +K + FL I+ G ++C D R L+ + +
Sbjct: 179 NIEPDHLEHFDGDFANLKRAYVHFLGNIKPNGTAIVCLDDHHVRELMPSVNR-------- 230
Query: 316 GVVSNQSSDLWGQGHDYKIITYG----FSSFNDWYA-ESVCPNVQGGSDYILCERGRPLA 370
K+ITY +S D+YA E VC ++ + Y + L
Sbjct: 231 -----------------KVITYSIDPVYSGSADFYATEIVCGDLT--TTYQAWHKDVHLG 271
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
++ L PG HNV NSLA + L ++ + LS F G RRF +IG
Sbjct: 272 EVILHFPGKHNVANSLAAMIVAL-------EAGVPFEKISQALSTFRGAKRRFQIIGDAQ 324
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+AHHPTE+ A L A+ + +IA+FQP Y+R L ++F+ A SEAD+V
Sbjct: 325 DILVVDDYAHHPTEIMATLNGAKA--CGRRVIAIFQPQRYTRTFFLMEEFSRAFSEADEV 382
Query: 491 VVSAVL 496
+++ +
Sbjct: 383 IITDIF 388
>gi|452991358|emb|CCQ97346.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium ultunense Esp]
Length = 466
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 232/429 (54%), Gaps = 43/429 (10%)
Query: 65 EECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLH 124
E CI D + +HF+GIGG +S LA++ L +G++VSGSD+ S +E L GA+++
Sbjct: 3 EFCIND--HNYSHVHFIGIGGISMSGLAEILLTEGYKVSGSDMNNSYIVERLKNLGADIY 60
Query: 125 IGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NL 183
IGHS +NI+G D +V + AI +DN E++ + VP R +L L + Y N
Sbjct: 61 IGHSENNIKGAD------LIVYTDAISKDNEELIKSLEDSVPTVDRATFLGALMKNYENS 114
Query: 184 IAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDG 243
IAVSG+HGK+TT SM+A +L T ++G + + G++ G K + EA EY G
Sbjct: 115 IAVSGTHGKTTTTSMIATILNRSLLKPTILLGGQLDEIG-GNVKLGTKKYLLTEACEYRG 173
Query: 244 CFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLD 303
L P++A++ N++ EH+D FED + + F ++ + I G+L+I D AR ++
Sbjct: 174 NILKYYPTIAIILNMEEEHLDYFEDINHIVDTFTQYGQNIYEDGYLIINSDDSNARKVIG 233
Query: 304 QIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILC 363
+ KIIT+G +S +D+ AE++ G ++L
Sbjct: 234 NTRA-------------------------KIITFGLNSKSDYSAENISFTTDGYPRFMLN 268
Query: 364 ERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRF 423
+ L + L + G+HNV N+LA I+ TL ESI K G RR
Sbjct: 269 IKDESLYPVKLNVMGIHNVYNALASISATHTLGVPIDTILESIEAYK-------GTHRRL 321
Query: 424 DLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANA 483
++ G I G I DD+AHHPTE++A L+A + N+ + +FQPHTY+R +L + FA +
Sbjct: 322 EVKGIINGIKIIDDYAHHPTEIKASLRALKNSTDNR-IWCIFQPHTYTRTKILLNSFAES 380
Query: 484 LSEADQVVV 492
SEAD+V++
Sbjct: 381 FSEADKVII 389
>gi|295094465|emb|CBK83556.1| UDP-N-acetylmuramate--L-alanine ligase [Coprococcus sp. ART55/1]
Length = 460
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 149/420 (35%), Positives = 221/420 (52%), Gaps = 41/420 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG +S LA++ LK GF+V+GSD+ S + L + GA ++IG SNI N
Sbjct: 12 VHFMGIGGISMSGLAEILLKAGFKVTGSDMKASEITDQLADMGALINIGQCASNITDN-- 69
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTTA 196
+ VV ++AI DN E A +P+ R L ++ E Y IAVSG+HGK+TT
Sbjct: 70 ---IDLVVYTAAIHPDNEEFKAAVEKNIPMLTRAQLLGQIMENYKYSIAVSGTHGKTTTT 126
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SML+Y+L D T VG + G+I G + FV EA EY + P ++++
Sbjct: 127 SMLSYILIDADTDPTISVGGILDSIG-GNIRVGKSEYFVTEACEYTNSYHAFKPFISIIL 185
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N+D +H+D F+D D + F F + G +++ GD +KY
Sbjct: 186 NVDADHLDFFKDIDEIAESFHVFATKTPKEGLVIVNGD----------------MKYYDT 229
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
VV + +++T+G + N + A ++ + G Y L G+ + I+L++
Sbjct: 230 VVRDLEC---------RVVTFGKGAQNKYSAHNIRFDDFGHPTYTLVVDGKEITDITLKV 280
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY-GCHIY 435
G HNV NSL+ IA L L SI +K LS+ +G RRF+ GTI +
Sbjct: 281 FGEHNVYNSLSAIAASLEL-------GISIDVIKQGLSECVGAERRFEYKGTILDNVRVM 333
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHPTE+ A L+AA+ N+ L VFQPHTYSR L D+F +AL D V+V+ +
Sbjct: 334 DDYAHHPTEIAATLKAAKNTSYNE-LWCVFQPHTYSRTYALFDEFVDALKVCDHVIVADI 392
>gi|255020014|ref|ZP_05292087.1| UDP-N-acetylmuramate--alanine ligase [Acidithiobacillus caldus ATCC
51756]
gi|254970543|gb|EET28032.1| UDP-N-acetylmuramate--alanine ligase [Acidithiobacillus caldus ATCC
51756]
Length = 465
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 145/416 (34%), Positives = 222/416 (53%), Gaps = 37/416 (8%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH VGIGGSG+ +A++ L G+ VSGSDL S+ L + GA + GH +N++G D
Sbjct: 8 IHMVGIGGSGMRGIAEVLLNLGYAVSGSDLRASAATLRLEDLGARIFSGHEAANVRGAD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSA+P+ N E+ A+ +P+ +R LA+L IAV+G+HGK+TT S
Sbjct: 67 -----VVVISSAVPESNPEVQAAREQRIPVIRRAEMLAELMRFRQGIAVAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A +L A D T ++G + + G G+ V EADE D FL L+P +AVVTN
Sbjct: 122 LVASILAAADLDPTFVIGGLLKSAGTNARL-GDGEYLVAEADESDASFLYLAPVMAVVTN 180
Query: 258 LDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + + ++ F +FL+++ G V+C D R L+ +++ L Y
Sbjct: 181 IDADHMDTYGGSLEELRRAFLQFLQRLPFYGLAVLCTDDPLVRGLIPELRSPV-LGYGFS 239
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++ + W Q G S F W V G + + L L I
Sbjct: 240 ASADLQARHWHQ-------VGGRSRFEVWR------RVDGEAVHWL--------DAELAI 278
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG HNVLN+LA I + + +G + ++ ++ L+ F GV RRF+++G G I D
Sbjct: 279 PGRHNVLNALAAIG-IASKVGVRAET------IQAALADFRGVGRRFEILGDFAGITIVD 331
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
D+ HHP E+ A L AAR +P++ ++ FQPH +SR L DF L +AD+ V+
Sbjct: 332 DYGHHPRELEATLAAARDMWPDRPIVLAFQPHRFSRTRDLFADFVEVLGKADRSVL 387
>gi|192292413|ref|YP_001993018.1| UDP-N-acetylmuramate--L-alanine ligase [Rhodopseudomonas palustris
TIE-1]
gi|229620427|sp|B3QFN0.1|MURC_RHOPT RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|192286162|gb|ACF02543.1| UDP-N-acetylmuramate/alanine ligase [Rhodopseudomonas palustris
TIE-1]
Length = 467
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 159/429 (37%), Positives = 230/429 (53%), Gaps = 52/429 (12%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G+ V GSD S+ + L E G +H+GH NI+G
Sbjct: 8 GPIHFVGIGGIGMSGIAEVLCNLGYTVQGSDASESANVNRLREKGIQIHVGHQADNIKGA 67
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D +V S+AI +DN E+L A++ +P+ +R LA+L + +A++G+HGK+TT
Sbjct: 68 D------VLVVSTAIKRDNPELLAARAQRIPVVRRAEMLAELMRLKSCVAIAGTHGKTTT 121
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L A D T I G + + + GGG V+EADE DG FL L VA+V
Sbjct: 122 TSMVAALLDAGDLDPTVINGGIINAYGTNARL-GGGDWMVVEADESDGTFLKLPADVAIV 180
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D F+ DAV+ FR F++ + G V+C D ++L+ +I+
Sbjct: 181 TNVDPEHLDHFKTFDAVQDAFRNFVENVPFYGFAVMCIDHPVVQTLVGKIE--------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR------PL 369
D +IITYG + D + + GGS + + R R +
Sbjct: 232 ---------------DRRIITYGENPQADARLLDLAAS-GGGSTFKVAFRDRKAGTAHEI 275
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHE---SIACLKLPLSKFMGVSRRFDLI 426
A + L +PG HN LN+ A IA +HE S ++ L+ F GV RRF
Sbjct: 276 ADLKLPMPGRHNALNATAAIAV----------AHELGLSDDTIRKALAAFGGVRRRFTKT 325
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G G I DD+ HHP E+ AVL+AARQ K +IAV QPH +SRL L ++F ++
Sbjct: 326 GEWNGVTIIDDYGHHPVEIAAVLKAARQSTSGK-VIAVVQPHRFSRLQSLFEEFCTCFND 384
Query: 487 ADQVVVSAV 495
AD V+V+ V
Sbjct: 385 ADAVIVADV 393
>gi|303232778|ref|ZP_07319463.1| UDP-N-acetylmuramate--L-alanine ligase [Atopobium vaginae
PB189-T1-4]
gi|302481264|gb|EFL44339.1| UDP-N-acetylmuramate--L-alanine ligase [Atopobium vaginae
PB189-T1-4]
Length = 503
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 151/420 (35%), Positives = 224/420 (53%), Gaps = 41/420 (9%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
HF+GIGG+G+S +A + ++G V+GSDL S Y+ L +AG ++HIGH+ I+
Sbjct: 50 HFIGIGGAGMSGIALVLHERGCVVTGSDLKSSHYVRELEDAGIHVHIGHTKDTIEAAK-- 107
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
P+ VV SSAI Q N E+++AK G+ I+ R L+ L+ IAV+G+HGK+TT+SM
Sbjct: 108 --PDVVVVSSAILQTNPELVYAKEHGIAIWPRAKMLSYLSLHAKTIAVAGTHGKTTTSSM 165
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
+A +L MGDD + ++G V ++ G FV EADE DG F+ L+P VAV+TN+
Sbjct: 166 IATMLDHMGDDPSFLIGGIVEEYKTNG-RSGKSDYFVCEADESDGSFMYLNPHVAVITNI 224
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVV 318
+ +H+D ++ D + F F+ + G +VICGD+ R+L
Sbjct: 225 EADHLDHYKTFDNLTRTFAAFMDLVGSDGTVVICGDNPTCRAL----------------- 267
Query: 319 SNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQ--GGSDYILCERGRPLAQISLQI 376
Q ++TYGF + D Y ++ N S + C G LA
Sbjct: 268 --------AQASSRHVVTYGFDATCD-YVCTLGANTHTITNSFQVRCPSGEELAITLTAN 318
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG HN LN+ A IA L D + ++ L F G RRF +GT + D
Sbjct: 319 PGTHNALNATAAIAAAGALGLDVYAAAKA-------LCTFKGAHRRFTHMGTWNDICVVD 371
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAVL 496
D+ HHPTE++A L AA+ K ++ VFQPH Y+R L ++FA+A +AD V+V+ V
Sbjct: 372 DYGHHPTEIKATLAAAKN-LQFKRIVCVFQPHRYTRTQALMNEFADAFVDADVVIVTDVF 430
>gi|340783403|ref|YP_004750010.1| UDP-N-acetylmuramate--alanine ligase [Acidithiobacillus caldus
SM-1]
gi|340557554|gb|AEK59308.1| UDP-N-acetylmuramate--alanine ligase [Acidithiobacillus caldus
SM-1]
Length = 465
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 145/416 (34%), Positives = 222/416 (53%), Gaps = 37/416 (8%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH VGIGGSG+ +A++ L G+ VSGSDL S+ L + GA + GH +N++G D
Sbjct: 8 IHMVGIGGSGMRGIAEVLLNLGYAVSGSDLRASAATLRLEDLGARIFSGHEAANVRGAD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSA+P+ N E+ A+ +P+ +R LA+L IAV+G+HGK+TT S
Sbjct: 67 -----VVVISSAVPESNPEVQAAREQRIPVIRRAEMLAELMRFRQGIAVAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A +L A D T ++G + + G G+ V EADE D FL L+P +AVVTN
Sbjct: 122 LVASILAAADLDPTFVIGGLLKSAGTNARL-GDGEYLVAEADESDASFLYLAPVMAVVTN 180
Query: 258 LDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + + ++ F +FL+++ G V+C D R L+ +++ L Y
Sbjct: 181 IDADHMDTYGGSLEELRRAFLQFLQRLPFYGLAVLCTDDPLVRGLIPELRSPV-LGYGFS 239
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++ + W Q G S F W V G + + L L I
Sbjct: 240 ASADLQARHWHQ-------VGGRSRFEVWR------RVDGEAVHWL--------DAELAI 278
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG HNVLN+LA I + + +G + ++ ++ L+ F GV RRF+++G G I D
Sbjct: 279 PGRHNVLNALAAIG-IASKVGVRAET------IQAALADFRGVGRRFEILGDFAGITIVD 331
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
D+ HHP E+ A L AAR +P++ ++ FQPH +SR L DF L +AD+ V+
Sbjct: 332 DYGHHPRELEATLAAARDMWPDRPIVLAFQPHRFSRTRDLFADFVEVLGKADRSVL 387
>gi|104783452|ref|YP_609950.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas entomophila
L48]
gi|122401968|sp|Q1I5B9.1|MURC_PSEE4 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|95112439|emb|CAK17166.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas entomophila L48]
Length = 482
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 157/425 (36%), Positives = 220/425 (51%), Gaps = 49/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G+EVSGSDL S E L GA + +GH N D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKASPVTERLESFGAEIFVGHRAENAASAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSAI N E+ A +P+ R LA+L + +AV+G+HGK+TT S
Sbjct: 78 -----VLVVSSAINPANPEVATALERRIPVVPRAEMLAELMRYRHGVAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+LA V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LLASVFAAGGLDPTFVIGGRLTAAGTNAQL-GTSRYLIAEADESDASFLHLQPMVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ +E D + +K F FL + G V+C D R +L Q+K+ T
Sbjct: 192 IDADHMATYEGDFNKLKKTFVEFLHNLPFYGLAVMCLDDPVVREILPQVKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDY--ILCERGRPLAQISL 374
+TYGFS D A +V QG + +L PL ++S+
Sbjct: 245 ------------------VTYGFSEEADIRAINV--RQQGMQTHFTVLRRDCEPL-EVSV 283
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY---- 430
+PG HNVLN+LA IA + D+ S E+I LS F GV RRF + G +
Sbjct: 284 NMPGNHNVLNALATIA----IATDEGISDEAIVQ---GLSGFQGVGRRFQVYGELPVEGG 336
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHPTEV AV++A R +P++ L+ V+QPH YSR L DDF L +A+ +
Sbjct: 337 SVMLVDDYGHHPTEVAAVIKAVRGGWPSRRLVIVYQPHRYSRTRDLYDDFVQVLGDANVL 396
Query: 491 VVSAV 495
++ V
Sbjct: 397 LLMEV 401
>gi|323694259|ref|ZP_08108435.1| UDP-N-acetylmuramate-alanine ligase [Clostridium symbiosum
WAL-14673]
gi|323501732|gb|EGB17618.1| UDP-N-acetylmuramate-alanine ligase [Clostridium symbiosum
WAL-14673]
Length = 459
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 141/428 (32%), Positives = 226/428 (52%), Gaps = 41/428 (9%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DF + +HFVGIGG +S LA++ + +GF++SGSD S L GA ++ G
Sbjct: 4 IDFTKPQS-VHFVGIGGISMSGLAEILMDEGFKISGSDAHESELTRHLEAKGAVVYYGQK 62
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVS 187
NI+ DG +AVV ++AI +DN E + K G+P+ R L ++ + Y IA++
Sbjct: 63 AENIK--DGI---DAVVYTAAIHEDNPEFMEVKRRGIPMMSRAELLGQMMKNYREAIAIA 117
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT SM+ + ++ T VG + G+I GG + FV EA EY FL
Sbjct: 118 GTHGKTTTTSMVTEIFLEADNNPTISVGGILNSI-GGNIRVGGPEFFVTEACEYTNSFLS 176
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P++AV+ N++ +H+D F++ D ++ FR+F++++ G +++ G + R L
Sbjct: 177 FYPTMAVILNIEEDHLDFFKNIDDIRRSFRQFIEKVPENGTIIMNGTIENWRELT----- 231
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR 367
G K++T+G S ND+ ++V + + L +G
Sbjct: 232 --------------------AGAAGKVVTFGNSKENDYSFDAVVYDEYARPSFDLYIKGE 271
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
+ISL + G HNV N+L IA + +S + L KF G +RRF+ G
Sbjct: 272 KKERISLGVQGEHNVYNALGAIAVAM-------ESGAGLEAAGRGLLKFTGTNRRFEKKG 324
Query: 428 TIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ G I DD+AHHP E+ A L+AA + +P+K + FQPHTY+R +FA ALS A
Sbjct: 325 ELKGITIIDDYAHHPQEIEATLKAA-ENYPHKRICCAFQPHTYTRTKAFMKEFAQALSLA 383
Query: 488 DQVVVSAV 495
D V+++ +
Sbjct: 384 DCVMLTDI 391
>gi|429761749|ref|ZP_19294163.1| UDP-N-acetylmuramate--L-alanine ligase [Anaerostipes hadrus DSM
3319]
gi|429183072|gb|EKY24146.1| UDP-N-acetylmuramate--L-alanine ligase [Anaerostipes hadrus DSM
3319]
Length = 463
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 150/429 (34%), Positives = 231/429 (53%), Gaps = 41/429 (9%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DF N+ IHF+GIGG +S LA++ +K+GF +SGSD+ S ++ L + GA +++ +
Sbjct: 6 IDF-NKPIHIHFMGIGGISMSGLAEILIKEGFSISGSDIHTSDIIKHLEDKGAKVYLSQT 64
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQD-NVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAV 186
NI + + VV ++AI D N E A +P+ KR L ++ Y N IAV
Sbjct: 65 ADNITDD-----IDLVVYTAAINFDTNEEYKEAIRRNIPVMKRATLLGQMMHNYQNAIAV 119
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
SG+HGK+TT SML+Y+L A D T VG + +G+I G + FV EA EY FL
Sbjct: 120 SGTHGKTTTTSMLSYILLAGNTDPTISVGG-ILDAINGNIRVGHSETFVTEACEYTNSFL 178
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 306
P ++++ N++ +H+D F+D D ++ FR F ++ G+L+I G+ + ++D +K
Sbjct: 179 EFFPKISIILNIEEDHMDFFKDLDDIRHSFREFAHKLPDYGYLIINGEIENIDYIVDGLK 238
Query: 307 QDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERG 366
+Y+ + N S D + Y +G + F+ +Y +G
Sbjct: 239 A----EYATFGLENDSYDYCAKNIGYD--AFGHARFDYYY------------------KG 274
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
+ I L + G HNV N+LA IA + D + +K L F G RRF+L
Sbjct: 275 EFIDHIQLNVNGEHNVKNALAAIAAAKRIGID-------VDTMKKGLLGFTGAKRRFELK 327
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
GT + DD+AHHPTE+ A L++A+ +P+ L VFQPHTYSR + DDFA ALS
Sbjct: 328 GTCNDFTVVDDYAHHPTEIHATLESAKN-YPHNELWCVFQPHTYSRTIAFLDDFAKALSL 386
Query: 487 ADQVVVSAV 495
D V+V+ +
Sbjct: 387 CDHVIVTDI 395
>gi|188585042|ref|YP_001916587.1| UDP-N-acetylmuramate--L-alanine ligase [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179349729|gb|ACB83999.1| UDP-N-acetylmuramate--alanine ligase [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 465
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 149/421 (35%), Positives = 230/421 (54%), Gaps = 44/421 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG G+SALA++ +++G++VSGSD+ SS ++ L E G +++ H NI D
Sbjct: 8 IHFIGIGGYGMSALAQVLIEEGYQVSGSDISSSSRIDFLKELGVEIYLSHKAENINSVD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
V+ S+AIP DN E+L AK G+ ++ R LA+L IA++G+HGK+TT S
Sbjct: 67 -----LVIYSTAIPGDNPELLAAKQRGISLWHRSELLAELINSRYGIAITGAHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVT 256
ML+ +L+ D T I+G +P F GS G +V+ EA E D FL SP +AV+T
Sbjct: 122 MLSLILEEASADPTCIIGGELPNF--GSNARVGDSEYVVAEACESDHSFLRYSPQIAVIT 179
Query: 257 NLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
N++ +H++ + D + +R+F++ I G + I S+C
Sbjct: 180 NIEADHLEHYNGSFDQLLKSYRQFIENIDDSGKVFIY--SEC------------------ 219
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQ 375
+ D +G T+GFS D+ A + N +G +++ + ++ L
Sbjct: 220 -----EYHDYLLEGMSKNCKTFGFSQDADFRATDLKLN-KGTTEFTIESDLADSFKVELM 273
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
+PG HN+LN+LA + L L S +K L KF G RRF IG + G I
Sbjct: 274 VPGEHNILNALAAASVALDL-------KISPTAIKRALQKFTGAKRRFMEIGQLQGATIV 326
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHPTE++A L+ A+++ NK +IA+FQPH ++R DDFA++ EAD V++ V
Sbjct: 327 DDYAHHPTEIKATLKTAQEQSDNK-VIAIFQPHRFTRTQYFMDDFASSFEEADTVILHKV 385
Query: 496 L 496
Sbjct: 386 F 386
>gi|421875781|ref|ZP_16307364.1| UDP-N-acetylmuramate--alanine ligase [Brevibacillus laterosporus
GI-9]
gi|372455238|emb|CCF16913.1| UDP-N-acetylmuramate--alanine ligase [Brevibacillus laterosporus
GI-9]
Length = 471
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 143/426 (33%), Positives = 226/426 (53%), Gaps = 51/426 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HFVGIGG G+S +A++ + G++V+GSD+ + L E GA + IGH S+I G D
Sbjct: 10 VHFVGIGGYGMSGIARVLVDLGYKVTGSDVAMNDLARKLQEKGAQVIIGHDASHIDGAD- 68
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV S++I ++N E+ A G+P+ R LAK+ + +AV+G+HGK+TT S
Sbjct: 69 -----IVVYSTSISKENPEVAAALEKGIPLLHRSQMLAKILNERTGVAVAGAHGKTTTTS 123
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVT 256
M A++L+A G+D T I+G + G+ G ++V+ EADE DG F P+ A+VT
Sbjct: 124 MTAHILEACGEDPTFIIGGELVNA--GTNAKAGKSDYVVAEADESDGSFKEYHPAYAIVT 181
Query: 257 NLDWEHVDIFEDEDA-VKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
N++ +H++ F+ + A +K + FL I+ G ++C D R L+ + +
Sbjct: 182 NIEPDHLEHFDGDFANLKKAYVHFLGNIKPDGTAIVCLDDHHVRELMPSVNR-------- 233
Query: 316 GVVSNQSSDLWGQGHDYKIITYG----FSSFNDWYA-ESVCPNVQGGSDYILCERGRPLA 370
K+ITY +S D+YA E VC ++ + Y + L
Sbjct: 234 -----------------KVITYSIDPVYSGSADFYATEIVCGDLT--TTYQAWHKDVHLG 274
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
++ L PG HNV NSLA + L ++ + LS F G RRF +IG
Sbjct: 275 EVILHFPGKHNVANSLAAMIVAL-------EAGVPFERISQALSTFRGAKRRFQIIGDAQ 327
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+AHHPTE+ A L A+ + +IA+FQP Y+R L ++F+ A SEAD+V
Sbjct: 328 DILVVDDYAHHPTEIMATLNGAKA--CGRRVIAIFQPQRYTRTFFLMEEFSRAFSEADEV 385
Query: 491 VVSAVL 496
+++ +
Sbjct: 386 IITDIF 391
>gi|66047328|ref|YP_237169.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
syringae B728a]
gi|75500775|sp|Q4ZNZ1.1|MURC_PSEU2 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|63258035|gb|AAY39131.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
syringae B728a]
Length = 486
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 157/425 (36%), Positives = 221/425 (52%), Gaps = 49/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G+EVSGSDL S+ E L GA + IGH N G D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKGSAVTERLESFGAQIFIGHRAENTIGAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 78 -----VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ +E D + +K F FL + G V+C D R +L +K+ T
Sbjct: 192 IDADHMATYEGDFNKLKKTFVEFLHNLPFYGLAVMCIDDPVVREILPLVKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLAQISL 374
+TYGFS D A +V Q G + + + R R +S+
Sbjct: 245 ------------------LTYGFSESADIRAINVR---QDGMLTFFTVLRRDREPLDVSV 283
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG--TIYGC 432
+PG HNVLNSLA IA + D+ S E+I LS F GV RRF + G + G
Sbjct: 284 NMPGNHNVLNSLATIA----IATDEGVSDEAIVQ---GLSGFQGVGRRFQVYGELPVDGG 336
Query: 433 HIY--DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
H+ DD+ HHP EV AV+ A R +P++ L+ V+QPH +SR L DDF L++A+ +
Sbjct: 337 HVMLVDDYGHHPREVAAVINAVRGGWPDRRLVMVYQPHRFSRTRDLYDDFVQVLADANVL 396
Query: 491 VVSAV 495
++ V
Sbjct: 397 LLMEV 401
>gi|117924062|ref|YP_864679.1| UDP-N-acetylmuramate--L-alanine ligase [Magnetococcus marinus MC-1]
gi|166224701|sp|A0L5N0.1|MURC_MAGSM RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|117607818|gb|ABK43273.1| UDP-N-acetylmuramate--L-alanine ligase [Magnetococcus marinus MC-1]
Length = 476
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 154/424 (36%), Positives = 226/424 (53%), Gaps = 44/424 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+S +A++ L G+ VSGSDL ++ ++ L + GA++ GH+ I+G D
Sbjct: 8 IHFVGIGGIGMSGIAEVLLTLGYRVSGSDLSENANIKRLRDKGAHIQQGHTAQAIEGAD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
AVV SSA+ +DN E++ A+++ +P+ R LA+L IA++G+HGK+TT S
Sbjct: 67 -----AVVTSSAVKRDNPEVMAARALRIPVVPRAEMLAELMRLKYGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A +L A D T + G V + G G V EADE DG FL LSP++AVVTN
Sbjct: 122 LVAALLGAADMDPTVVNGGIVKSLGSNA-HVGQGAFLVTEADESDGSFLKLSPTIAVVTN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D EH++ + DAV+ FR F+ +I G V+CGD L +++
Sbjct: 181 MDPEHMNHYGTFDAVREAFRGFVSKIPFYGLAVLCGDHPEVSLLAEEML----------- 229
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYA-----ESVCPNVQG-GSDYILCERGRPLAQ 371
D ++ITYG S D A E + + + D R L
Sbjct: 230 -------------DKRVITYGLSDQVDLQAVHIRQEGIVTHFEVIQHDRHHGRESRSLGT 276
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG 431
I L +PG HNV N+LA +A + L + C++ L+ F GV RRFDL+
Sbjct: 277 IQLNMPGCHNVSNTLAALAVAMELAVPWER------CVR-ALAGFGGVQRRFDLLHQEAA 329
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
I DD+AHHP E+ A ++A R +P + ++AVFQPH YSR++ DF AD V+
Sbjct: 330 ITIIDDYAHHPVEIAATMEAVRNGYPQQRVVAVFQPHRYSRVLDHMHDFCRCFKNADVVL 389
Query: 492 VSAV 495
V +
Sbjct: 390 VDEI 393
>gi|225850494|ref|YP_002730728.1| UDP-N-acetylmuramate--alanine ligase [Persephonella marina EX-H1]
gi|254766015|sp|C0QPY2.1|MURC_PERMH RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|225645302|gb|ACO03488.1| UDP-N-acetylmuramate--alanine ligase [Persephonella marina EX-H1]
Length = 459
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 142/426 (33%), Positives = 209/426 (49%), Gaps = 45/426 (10%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
F+ + IHF+GIGGSG++ +A++ L QGF V+GSDL S + L GA ++IGH
Sbjct: 2 FRGKVRHIHFIGIGGSGMNGIAQVLLNQGFTVTGSDLKESQTVINLKNMGAKIYIGHDPK 61
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N+ G D VV SSA+ QDN E+L AK +G+P R LA+L IA++GSH
Sbjct: 62 NVDGAD------VVVYSSAVKQDNPELLRAKQLGIPTIPRGEMLAELMRFKYGIAIAGSH 115
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT SM+ +L G D T ++G + + + G G V EADE DG FL L+P
Sbjct: 116 GKTTTTSMVGTILGKTGYDPTVVIGGKLEAYGSNAKL-GSGDFIVTEADESDGSFLKLTP 174
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
++ + N+D EH+ +++ + +K F F ++ G + + D Q + ++
Sbjct: 175 TIVSINNIDLEHIGFYKNLNDIKRAFIDFANKVPFYGAVAVNIDDQNIKDII-------- 226
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
+ +G D I Y N Y V
Sbjct: 227 ------PEIEKKIIRFGISEDSDIRGYDLRLENGRYRFKV----------------NDFG 264
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+I L IPG HNV N+LA I+ + L +K L F +RRF+ I
Sbjct: 265 EIYLSIPGKHNVYNALAAISISVEL-------GVPFCVIKEALENFKNANRRFE-IKYDG 316
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+AHHPTE++A L A R+ F + +IAVFQPH YSR L D F + + D
Sbjct: 317 SVTVIDDYAHHPTEIKATLSATREMFDGRRIIAVFQPHRYSRTFSLYDHFVRSFNIPDIT 376
Query: 491 VVSAVL 496
V++ +
Sbjct: 377 VITEIF 382
>gi|90416337|ref|ZP_01224269.1| UDP-N-acetylmuramate--alanine ligase [gamma proteobacterium
HTCC2207]
gi|90332062|gb|EAS47276.1| UDP-N-acetylmuramate--alanine ligase [marine gamma proteobacterium
HTCC2207]
Length = 485
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 155/432 (35%), Positives = 227/432 (52%), Gaps = 53/432 (12%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGGSG+ +A++ L QG+E+SGSD+ + L AGA + IGHS +NI
Sbjct: 14 RIKRIHFVGIGGSGMCGIAEVLLNQGYEISGSDISQGPSIRRLQAAGATVFIGHSEANII 73
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
G N VV SSA+ +N EI A++ G+P+ +R LA+L + IA++G+HGK+
Sbjct: 74 G------ANVVVKSSAVTVENTEIAAARAQGIPVVRRAEMLAELMRYRHGIAIAGTHGKT 127
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S++ +L G D T +VG V + GG + V EADE D FL L P VA
Sbjct: 128 TTTSLITAILAEDGRDPTFVVGGRVNSAGTNAKL-GGSRYLVAEADESDASFLHLQPMVA 186
Query: 254 VVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
VVTN++ +H++ ++ D + + FL + G V+C D R LL + +
Sbjct: 187 VVTNIEADHMETYDFDFSRLTKTYIEFLHNLPFYGLAVMCIDDPVIRDLLVDVAR----- 241
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA-- 370
++TYGFS + + + QG S +++ ER LA
Sbjct: 242 --------------------PMLTYGFSDDAAYRVRDLTVD-QGRSTFVI-ERPDGLAEL 279
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIA--CLKLPLSKFMGVSRRFDLIGT 428
Q+SL +PG HN LN+ A IA S E I+ + LS F GV RRF++ G
Sbjct: 280 QVSLNMPGRHNALNAAAAIAV---------ASDEGISDRAIIQGLSSFSGVGRRFEIYGD 330
Query: 429 IY-----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANA 483
+ DD+ HHPTE++A + A R +P+K L+ +FQPH Y+R L +DF
Sbjct: 331 YQLESGGSAMLVDDYGHHPTEIKATVDAVRGGWPDKRLVMIFQPHRYTRTRDLYEDFVKV 390
Query: 484 LSEADQVVVSAV 495
L+E D +++ AV
Sbjct: 391 LAEVDVLILLAV 402
>gi|383640291|ref|ZP_09952697.1| UDP-N-acetylmuramate--L-alanine ligase [Sphingomonas elodea ATCC
31461]
Length = 470
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 156/425 (36%), Positives = 232/425 (54%), Gaps = 45/425 (10%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G++V GSD+ S ++GL + G + IGH+ N+
Sbjct: 9 GTIHFVGIGGIGMSGIAEVMHNLGYQVQGSDVADSYVVQGLRDRGIPVTIGHAAENLG-- 66
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
VV S+AI + N E+ A +P+ +R LA+L + +AV+G+HGK+TT
Sbjct: 67 ----EAAVVVVSTAIVRTNPEVEAAYQNRIPVVRRAEMLAELMRLKSTVAVAGTHGKTTT 122
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L A G D T I G + Q+ + G + V+EADE DG FL L ++AVV
Sbjct: 123 TSMVAALLDAGGVDPTVINGGIINQYGSNARL-GDSEWMVVEADESDGSFLRLDGTIAVV 181
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D + + VK+ F F++ + G ++C D ++++ +++
Sbjct: 182 TNIDPEHLDHYGSFEKVKAAFVEFVENVPFYGAALLCLDHPEVQAIIPRVR--------- 232
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS-DYILCERG---RPLAQ 371
D +I+TYGF++ D +V P+ G + I+ R R +
Sbjct: 233 ---------------DRRIVTYGFAASADVRGVNVTPHAGGNRFEAIIRNRDGSTRSIEN 277
Query: 372 ISLQIPGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
I L +PG HNV N+LA I L L I D A ++ +KF GV RRF +G +
Sbjct: 278 IELPMPGRHNVQNALAAIGVALELGIPD--------ATIQQGFAKFGGVKRRFTKVGEVA 329
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
G I DD+ HHP E+RAVL AAR+ + +IAV QPH YSRL L D+FA A ++AD V
Sbjct: 330 GASIIDDYGHHPVEIRAVLAAARESTRGR-VIAVVQPHRYSRLGNLMDEFAQAFNDADMV 388
Query: 491 VVSAV 495
V+ V
Sbjct: 389 YVAPV 393
>gi|221632098|ref|YP_002521319.1| UDP-N-acetylmuramate--L-alanine ligase [Thermomicrobium roseum DSM
5159]
gi|221155634|gb|ACM04761.1| UDP-N-acetylmuramate--alanine ligase [Thermomicrobium roseum DSM
5159]
Length = 462
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 147/418 (35%), Positives = 218/418 (52%), Gaps = 44/418 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG+G+S LA+L +G+ V+G D+ WS ++ L+ + +GH + Q
Sbjct: 16 IHFLGIGGAGMSGLAELLADRGYRVTGCDVAWSPVLDRLVARDIAVAVGHDERHAQDA-- 73
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ +V +SA+ + E+ + +PI KR L L Y IAV+G+HGKSTT
Sbjct: 74 ----HLLVVTSAVRAQHPEVAAFAAQRIPIVKRAALLGWLAASYRTIAVAGTHGKSTTCG 129
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A L A G +GA V S GG FV+EADEYD FL L P +AVV N
Sbjct: 130 MIALALDAAGLTPGFAIGAEVRDLGGTSARLPGGNLFVVEADEYDYSFLFLEPDIAVVLN 189
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D +H D+F D +V FRRFL ++R G V+ D A ++ D+++
Sbjct: 190 VDHDHPDLFPDRASVARAFRRFLARLRPVGTAVVWADDPVACAVADELQS---------- 239
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
+GH +++T+G ++ A V P D L + + ++L +P
Sbjct: 240 ----------RGH--RVVTFGETAEA---AYRVLP------DGALRDPSGAIWPLALAVP 278
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD 437
G HN LN+ A +A V+ + + + L F GV RRF+ +G + G + D
Sbjct: 279 GRHNRLNAAAAVAAVVQVGVPLVVAVRA-------LEHFNGVGRRFEEVGIVNGVRVILD 331
Query: 438 FAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
+AHHP E+ A + AAR+RFP L AVFQPHTYSR +FA+AL +AD VV+ +
Sbjct: 332 YAHHPREIAATIAAARERFPAARLWAVFQPHTYSRTARFLTEFAHALEQADLAVVAEI 389
>gi|398898351|ref|ZP_10648271.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM50]
gi|398184405|gb|EJM71858.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM50]
Length = 486
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 154/424 (36%), Positives = 218/424 (51%), Gaps = 47/424 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G+EVSGSDL S E L GA+++IGH N D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKASPVTERLESFGAHIYIGHRAENAANAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 78 -----VLVTSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ ++ D + +K F FL + G V+C D R +L Q+K+ T
Sbjct: 192 IDADHMATYDGDFNKLKKTFVEFLHNLPFYGLAVVCLDDPVVREILPQVKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER-GRPLAQISLQ 375
+TYGF D A +V QG + R R +S+
Sbjct: 245 ------------------VTYGFGDDADVRAINV--RQQGMQTFFTVLRPDREPLDVSVN 284
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----G 431
+PG HNVLN+LA I + D+ S E+I LS F GV RRF + G +
Sbjct: 285 MPGNHNVLNALATIC----IATDEGVSDEAIVQ---GLSGFQGVGRRFQVYGELPVEGGN 337
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+ HHPTEV AV++A R +P + L+ V+QPH YSR L DDF N L++A+ ++
Sbjct: 338 VMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVNVLADANVLL 397
Query: 492 VSAV 495
+ V
Sbjct: 398 LMEV 401
>gi|398841922|ref|ZP_10599127.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM102]
gi|398107031|gb|EJL97041.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM102]
Length = 486
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 154/424 (36%), Positives = 218/424 (51%), Gaps = 47/424 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G+EVSGSDL S E L GA+++IGH N D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKASPVTERLESFGAHIYIGHRAENAANAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 78 -----VLVTSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ ++ D + +K F FL + G V+C D R +L Q+K+ T
Sbjct: 192 IDADHMATYDGDFNKLKKTFVEFLHNLPFYGLAVVCLDDPVVREILPQVKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER-GRPLAQISLQ 375
+TYGF D A +V QG + R R +S+
Sbjct: 245 ------------------VTYGFGDDADVRAINV--RQQGMQTFFTVLRPDREPLDVSVN 284
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----G 431
+PG HNVLN+LA I + D+ S E+I LS F GV RRF + G +
Sbjct: 285 MPGNHNVLNALATIC----IATDEGVSDEAIVQ---GLSGFQGVGRRFQVYGELPVDGGN 337
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+ HHPTEV AV++A R +P + L+ V+QPH YSR L DDF N L++A+ ++
Sbjct: 338 VMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVNVLADANVLL 397
Query: 492 VSAV 495
+ V
Sbjct: 398 LMEV 401
>gi|398978387|ref|ZP_10687762.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM25]
gi|398137187|gb|EJM26253.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM25]
Length = 486
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 155/428 (36%), Positives = 218/428 (50%), Gaps = 47/428 (10%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG G+ +A++ L G+EVSGSDL S E L GA + IGH N
Sbjct: 15 RIRRIHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKASPVTERLESFGAQIFIGHRAENAA 74
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
D +V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+
Sbjct: 75 AAD------VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKT 128
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S++A V A G D T ++G + + G + + EADE D FL L P VA
Sbjct: 129 TTTSLIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVA 187
Query: 254 VVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
VVTN+D +H+ ++ D + +K F FL + G V+C D R +L Q+K+
Sbjct: 188 VVTNIDADHMATYDGDFNKLKKTFVEFLHNLPFYGLAVVCLDDPVVREILPQVKR----- 242
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER-GRPLAQ 371
++TYGFS D A +V QG + R R
Sbjct: 243 --------------------PVVTYGFSEEADVRAINV--RQQGMQTFFTVLRPDREPLD 280
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY- 430
+S+ +PG HNVLN+LA I + D+ S E+I LS F GV RRF + G +
Sbjct: 281 VSVNMPGNHNVLNALATIC----IATDEGVSDEAIVQ---GLSGFQGVGRRFQVYGELPV 333
Query: 431 ---GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ DD+ HHPTEV AV++A R +P + L+ V+QPH YSR L DDF N L++A
Sbjct: 334 DGGSVMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVNVLADA 393
Query: 488 DQVVVSAV 495
+ +++ V
Sbjct: 394 NVLLLMEV 401
>gi|297569450|ref|YP_003690794.1| UDP-N-acetylmuramate/alanine ligase [Desulfurivibrio alkaliphilus
AHT2]
gi|296925365|gb|ADH86175.1| UDP-N-acetylmuramate/alanine ligase [Desulfurivibrio alkaliphilus
AHT2]
Length = 490
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 161/418 (38%), Positives = 220/418 (52%), Gaps = 34/418 (8%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+S +A+L L G+ VSGSDL S L E G + IGH + G D
Sbjct: 8 IHFVGIGGIGMSGIAELLLNLGYRVSGSDLRESRITRRLRELGGRIGIGHDGRWVVGAD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE-KYNLIAVSGSHGKSTTA 196
VV SSA+ DN E+ A +P+ R LA+L K N IAV+GSHGK++T
Sbjct: 67 -----VVVISSAVKPDNPEVTAAHEALIPVIPRAEMLAELMRLKINGIAVAGSHGKTSTT 121
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM +L G D T ++G V F + G G V EADE DG FL LSP + +VT
Sbjct: 122 SMAGTLLAEAGLDPTVVIGGQVNSFGSNAKL-GEGDFLVAEADESDGSFLKLSPVLEIVT 180
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N+D EHVD + D +AVK+ F F+ +I G ++C D +LL +++ T + Y
Sbjct: 181 NIDLEHVDHYHDLEAVKAAFLEFINRIPFYGAAILCLDDPNVAALLPLVRKRT-ITYG-- 237
Query: 317 VVSNQSSDLWGQGHDYKIITYGF-SSFNDWYA--ESVCPNVQG-------GSDYILCERG 366
+S+Q+ D+ + +I + GF S F W E N + D + E
Sbjct: 238 -LSSQA-DVQAR----EITSRGFVSRFEVWQRGREQATNNGKNCAQDNGMAQDAVSREPL 291
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
R L ++L +PG HN+ N+LAVIA L L + LS + GV RR ++
Sbjct: 292 RKLGSVALAVPGRHNIYNALAVIALGLEL-------EIPFPVIARALSTYSGVQRRLEVK 344
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANAL 484
G + G + DD+ HHPTE+RA L A RQ +P + L+ +FQPH YSR L DF A
Sbjct: 345 GEVDGITVVDDYGHHPTEIRATLAAMRQAWPKRRLVVLFQPHRYSRTAGLLPDFCTAF 402
>gi|363894523|ref|ZP_09321604.1| UDP-N-acetylmuramate-alanine ligase [Eubacteriaceae bacterium
ACC19a]
gi|361962274|gb|EHL15420.1| UDP-N-acetylmuramate-alanine ligase [Eubacteriaceae bacterium
ACC19a]
Length = 449
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 138/419 (32%), Positives = 221/419 (52%), Gaps = 40/419 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
I F+GIGG +SALA + G++V GSD S + L ++G ++IGH+ NI +
Sbjct: 3 IFFIGIGGISMSALAVICKNVGYDVYGSDRESSEITKKLEKSGIKIYIGHNKDNITED-- 60
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKSTTA 196
+ VV ++AI +DN E++ + ++G+ +R +L L EKY N IA+SG+HGK+TT
Sbjct: 61 ---FDMVVYTAAIAKDNEELVKSYNLGLNTMERANFLGHLMEKYENSIAISGTHGKTTTT 117
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SML + TA++G G+I G F+ EA EY FL P +A++T
Sbjct: 118 SMLTLIFNKDNTSPTALIGGVFANIG-GNIEIGSSDIFITEACEYVDSFLQFFPKIAIIT 176
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F+D +++K F +F Q++ G ++ GD + +S L
Sbjct: 177 NIEADHLDYFKDLESIKKSFLKFSNQVKSNGFVIANGDDENVKSAL-------------- 222
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+ + KI GF ND+ ++V + +G ++ L + + SL++
Sbjct: 223 -----------KNSNSKIYYCGFDETNDFVCKNVKSDDEGYPNFDLFFKNELIENFSLKV 271
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
G HN+ N++ IA K S + +K L +F GV RRF+ IG G +YD
Sbjct: 272 YGKHNIYNAICSIAAAYLC---KINS----SVIKSALLEFTGVGRRFEYIGEKNGIKVYD 324
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHPTE++A L AA+ N+ LI++FQPHTYSR L DF + D ++ + +
Sbjct: 325 DYAHHPTEIKATLNAAKSIKKNR-LISIFQPHTYSRTKSLFKDFNTCFDDTDIIIFADI 382
>gi|312959058|ref|ZP_07773577.1| UDP-N-acetylmuramate-L-alanine ligase [Pseudomonas fluorescens WH6]
gi|311286828|gb|EFQ65390.1| UDP-N-acetylmuramate-L-alanine ligase [Pseudomonas fluorescens WH6]
Length = 481
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 156/428 (36%), Positives = 219/428 (51%), Gaps = 47/428 (10%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG G+ +A++ L G++VSGSDL S E L GA + IGH N
Sbjct: 15 RIRRIHFVGIGGVGMCGIAEVLLNLGYQVSGSDLKDSPVTERLKSFGAQIFIGHRAENAA 74
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
D +V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+
Sbjct: 75 EAD------VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKT 128
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S++A V A G D T ++G + + G + + EADE D FL L P VA
Sbjct: 129 TTTSLIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVA 187
Query: 254 VVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
VVTN+D +H+ ++ D + +K F FL + G V+C D R +L Q+K+ T
Sbjct: 188 VVTNIDADHMATYDGDFNKLKKTFVEFLHNLPFYGLAVVCLDDPVVREILPQVKRPT--- 244
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER-GRPLAQ 371
+TYGFS D A +V +G Y R R
Sbjct: 245 ----------------------VTYGFSEDADVRAINV--RQEGMQTYFTVLRPDREPLD 280
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY- 430
+S+ +PG HNVLNSLA I + D+ S E+I LS+F GV RRF + G +
Sbjct: 281 VSVNMPGNHNVLNSLATIC----IATDEGVSDEAIVE---GLSRFAGVGRRFQVYGQLPV 333
Query: 431 ---GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ DD+ HHPTEV AV++A R +P + L+ V+QPH YSR L DDF N L++A
Sbjct: 334 DGGDVMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVNVLADA 393
Query: 488 DQVVVSAV 495
+ +++ V
Sbjct: 394 NVLLLMEV 401
>gi|388600438|ref|ZP_10158834.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio campbellii DS40M4]
Length = 485
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 145/439 (33%), Positives = 222/439 (50%), Gaps = 61/439 (13%)
Query: 67 CIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG 126
+V R IHF+GIGG+G+S +A++ L +G++++GSDL + E L+ GA + IG
Sbjct: 14 AMVPEMRRVKSIHFIGIGGAGMSGIAEVLLNEGYQITGSDLSENPVTERLVSKGATVFIG 73
Query: 127 HSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAV 186
H SN++ + VV S+AI ++N E++ A+ + +PI +R LA+L + IAV
Sbjct: 74 HQASNVEK------ASVVVVSTAINEENPEVMAARELRIPIVRRAEMLAELMRFRHGIAV 127
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEA 238
+G+HGK+TT +++ + G D P F +G + G N + EA
Sbjct: 128 AGTHGKTTTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGSSRILIAEA 178
Query: 239 DEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQC 297
DE D FL L P V++VTN++ +H+D + D + +K F FL + G ++C D
Sbjct: 179 DESDASFLHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAIVCIDDPV 238
Query: 298 ARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG 357
R L+ +I + ++ITYG S D E Q G
Sbjct: 239 IRELIPRISR-------------------------QVITYGVSEDADVRIEDYHQEGQQG 273
Query: 358 SDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFM 417
+ + GR I+L IPG HN LN+ A IA + S E+I LK ++
Sbjct: 274 K-FTVVREGRANLDITLNIPGRHNALNASAAIAVAT----EDDISDEAI--LK-AMAGTQ 325
Query: 418 GVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRL 473
G RRFD +G + + DD+ HHPTEV + AAR + +K L+ +FQPH YSR
Sbjct: 326 GTGRRFDHLGEFDTGNGHAMLVDDYGHHPTEVDVTIHAARSGWQDKRLVMIFQPHRYSRT 385
Query: 474 VVLKDDFANALSEADQVVV 492
L DDFAN L + D +++
Sbjct: 386 RDLYDDFANVLEQVDVLIM 404
>gi|405983690|ref|ZP_11041995.1| UDP-N-acetylmuramate-alanine ligase [Slackia piriformis YIT 12062]
gi|404388505|gb|EJZ83587.1| UDP-N-acetylmuramate-alanine ligase [Slackia piriformis YIT 12062]
Length = 461
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 141/422 (33%), Positives = 227/422 (53%), Gaps = 52/422 (12%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+G+GG G+S +A++A G VSGSD+ S Y E L++AG + +GH +N+ +
Sbjct: 8 VHFIGVGGVGMSGIARVASDSGMRVSGSDMKSSRYTEQLVQAGIPVFVGHDAANLPSD-- 65
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ VV S+AIP+ N E+ A+ G+ +++R LA+L +A +G+HGK+TT+S
Sbjct: 66 ---CDVVVVSTAIPETNPELAAARERGIEVWQRARMLAELGRGKKTLAAAGTHGKTTTSS 122
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
MLA A+G T +VG V + ++ G G+ +V+EADE DG FL LSP VA+VTN
Sbjct: 123 MLATATDALGLSPTFVVGGIVDAYQTNAV-SGEGEYYVVEADESDGSFLNLSPYVALVTN 181
Query: 258 LDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
++ +H+D + + ++ F RF+ + G +V CG+ S L + + TG
Sbjct: 182 VEADHLDHYVGGIEEIRETFARFMSSVPDQGAIVACGED----SALVDLARSTG------ 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSS-----FNDWYAESVCPNVQGGSDYILCERGRPLAQ 371
+++TYGF + D+ E + + + L Q
Sbjct: 232 ---------------KRVVTYGFDASCDTRVLDYRTEGIA------TLFTLAFSDGLSVQ 270
Query: 372 ISL-QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
L + PG HN LN+ V++ + L D ++ E +A + GV RRFDL+G
Sbjct: 271 CRLAKNPGRHNALNAAGVLSVIWALGEDVSRAAEGLA-------GYSGVRRRFDLVGEAA 323
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
G + DD+AHHPTEV A ++AA+ ++ ++ +FQPH Y+R L +FA+A AD +
Sbjct: 324 GVTVVDDYAHHPTEVAATIEAAKALSFDR-VVVLFQPHRYTRTQTLAKEFAHAFDRADAL 382
Query: 491 VV 492
+V
Sbjct: 383 MV 384
>gi|170720131|ref|YP_001747819.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas putida W619]
gi|229620051|sp|B1J3L3.1|MURC_PSEPW RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|169758134|gb|ACA71450.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas putida W619]
Length = 482
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 154/425 (36%), Positives = 219/425 (51%), Gaps = 49/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G+EVSGSDL S + L GA + +GH N D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKVSPVTQRLESFGAEIFVGHRAENAAHAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSAI N E+ A +P+ R LA+L + +AV+G+HGK+TT S
Sbjct: 78 -----VLVVSSAINPANPEVATALERRIPVVPRAEMLAELMRYRHGVAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+LA V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LLASVFAAGGLDPTFVIGGRLTAAGTNAQL-GTSRYLIAEADESDASFLHLQPMVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ +E D + +K F FL + G V+C D R +L Q+K+ T
Sbjct: 192 IDADHMATYEGDFNKLKKTFVEFLHNLPFYGLAVMCLDDPVVREILPQVKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLAQISL 374
+TYGF D A +V Q G + + + R R ++S+
Sbjct: 245 ------------------VTYGFCEEADIRAINVS---QKGMQTHFTVLRRDREPLEVSV 283
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY---- 430
+PG HNVLN+LA IA + D+ S E+I LS F GV RRF + G +
Sbjct: 284 NMPGNHNVLNALATIA----IATDEGISDEAIVQ---GLSGFQGVGRRFQVYGELPVEGG 336
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHPTEV AV++A R +P++ L+ V+QPH YSR L DDF L +A+ +
Sbjct: 337 SVMLVDDYGHHPTEVAAVIKAVRGGWPSRRLVIVYQPHRYSRTRDLYDDFVQVLGDANVL 396
Query: 491 VVSAV 495
++ V
Sbjct: 397 LLMEV 401
>gi|346306856|ref|ZP_08849006.1| UDP-N-acetylmuramate-alanine ligase [Dorea formicigenerans
4_6_53AFAA]
gi|345907753|gb|EGX77460.1| UDP-N-acetylmuramate-alanine ligase [Dorea formicigenerans
4_6_53AFAA]
Length = 459
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 153/419 (36%), Positives = 231/419 (55%), Gaps = 40/419 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG +S LA++ L++ F VSGSD S+ + L +AGA + G SNI DG
Sbjct: 12 VHFIGIGGISMSGLAEVLLEENFTVSGSDNKESALTDHLEKAGAQIFYGQKASNII--DG 69
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTTA 196
+ VV ++AI +DN E A G+P+ R L +L Y++ IAVSG+HGK+TT
Sbjct: 70 ---IDVVVYTAAIHKDNEEYQAAVQKGLPMLTRAELLGQLMTNYDIPIAVSGTHGKTTTT 126
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM++++L A D T VG + + G+I G + FV EA EY FL P ++V+
Sbjct: 127 SMISHILLAGEMDPTISVGG-ILKAIGGNIRVGNSEIFVTEACEYTNSFLSFFPKISVIL 185
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N+D +H+D F+D + +++ F RF K + G LVI GD +D++ + TG
Sbjct: 186 NIDEDHLDFFKDLEDIRNSFHRFAKLLPKDGTLVINGD-------IDRLDEITG------ 232
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
DL D KI+TYG + ++A +V + G + + L + G + +ISL +
Sbjct: 233 -------DL-----DCKIVTYGTNPSATYHAANVTHDELGEASFDLVKNGEFVDRISLSV 280
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
G HNV N+LA +A L +++ K L +F G RRF+ G G I D
Sbjct: 281 SGDHNVSNALAALAVADLLD-------VNVSVAKKGLKEFHGTDRRFEYKGETNGVTIID 333
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHPTE+ A L AA +P++ + +FQPHTY+R L +F ALS D V+++ +
Sbjct: 334 DYAHHPTEIAATLTAATH-YPHREIWCIFQPHTYTRTKALFPEFVEALSHTDHVILADI 391
>gi|83721549|ref|YP_441667.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia thailandensis
E264]
gi|167618582|ref|ZP_02387213.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia thailandensis
Bt4]
gi|257137836|ref|ZP_05586098.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia thailandensis
E264]
gi|109892697|sp|Q2SZI2.1|MURC_BURTA RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|83655374|gb|ABC39437.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia thailandensis
E264]
Length = 465
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 149/425 (35%), Positives = 219/425 (51%), Gaps = 48/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ + G++VSGSDL ++ E L GA + IGH +NI+G
Sbjct: 8 IHFVGIGGAGMSGIAEVLVNLGYQVSGSDLARNAVTERLEALGARVSIGHDAANIEG--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
NAVV S+A+ DN E+L A+ + VPI R LA+L IA++G+HGK+TT S
Sbjct: 65 ---ANAVVVSTAVRSDNPEVLAARRLRVPIVPRAVMLAELMRLKQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL A G D T ++G + + G G V EADE D FL L P + V+TN
Sbjct: 122 LVASVLAAGGLDPTFVIGGRLTS-AGANARLGTGDFIVAEADESDASFLNLYPVIEVITN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D +K F F +++ G V+C D R ++ I +
Sbjct: 181 IDADHMDTYGHDFARLKQAFIEFTQRLPFYGSAVVCIDDPNVRQIVPLISK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++ YGF++ AE+V G + + GR + L +
Sbjct: 232 ----------------PVVRYGFAADAQVRAENVEAR-DGRMHFTVLREGREPLPVVLNL 274
Query: 377 PGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC--- 432
PG+HNV N+LA IA L + D ++ L++F GV RRF G +
Sbjct: 275 PGLHNVQNALAAIAIATDLDVADT--------AIQQALAEFNGVGRRFQRYGEMPAAGGG 326
Query: 433 --HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP E+ A + AAR FP + L+ FQPH Y+R DDF N LS D +
Sbjct: 327 AYTLIDDYGHHPVEMAATIAAARGAFPGRRLVLAFQPHRYTRTRDCFDDFVNVLSTVDAL 386
Query: 491 VVSAV 495
V++ V
Sbjct: 387 VLTEV 391
>gi|343492098|ref|ZP_08730471.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio nigripulchritudo
ATCC 27043]
gi|342827438|gb|EGU61826.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio nigripulchritudo
ATCC 27043]
Length = 487
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 145/435 (33%), Positives = 215/435 (49%), Gaps = 61/435 (14%)
Query: 67 CIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG 126
+V R IHFVGIGG+G+S +A++ L +G+ +SGSDL + E L GA ++ G
Sbjct: 14 AMVPEMRRVKSIHFVGIGGAGMSGIAEVLLNEGYHISGSDLAENPVTERLSSKGATIYFG 73
Query: 127 HSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAV 186
H SN++ + VV S+AI Q+N E++ AK +P+ +R LA+L + IAV
Sbjct: 74 HDASNVEK------ASVVVVSTAISQENPELVAAKERRIPVVRRAEMLAELMRFRHGIAV 127
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEA 238
+G+HGK+TT +++ + G D P F +G + G N + EA
Sbjct: 128 AGTHGKTTTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGSSRILIAEA 178
Query: 239 DEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQC 297
DE D FL L P V++VTN++ +H+D + D + +K F FL + G ++C D
Sbjct: 179 DESDASFLHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAIMCIDDPV 238
Query: 298 ARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG 357
R L+ + + ++ITYGFS D E+ Q G
Sbjct: 239 VRELIPSVSR-------------------------QVITYGFSEDADVRIENYRQEGQQG 273
Query: 358 SDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFM 417
+ + +G+ I+L IPG HN LN+ A IA A LK ++
Sbjct: 274 K-FTVVRQGKADLDITLNIPGKHNALNASAAIAVA------TEDDVSDDAILK-AMAGTQ 325
Query: 418 GVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRL 473
G RRFD +G + + DD+ HHP+EV +QAAR + +K L+ VFQPH YSR
Sbjct: 326 GTGRRFDHLGEFETGNGVAMLVDDYGHHPSEVDVTIQAARAGWEDKRLVMVFQPHRYSRT 385
Query: 474 VVLKDDFANALSEAD 488
L DDFAN L + D
Sbjct: 386 RDLYDDFANVLEKVD 400
>gi|229830143|ref|ZP_04456212.1| hypothetical protein GCWU000342_02250 [Shuttleworthia satelles DSM
14600]
gi|229791441|gb|EEP27555.1| hypothetical protein GCWU000342_02250 [Shuttleworthia satelles DSM
14600]
Length = 458
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 141/419 (33%), Positives = 215/419 (51%), Gaps = 40/419 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG +S LA++ L + F VSGSD S+ E L GA + S +N+ +
Sbjct: 12 VHFIGIGGISMSGLAEILLDRHFTVSGSDRSPSAITEHLSSLGAKIACPQSAANVTDD-- 69
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKSTTA 196
+ V ++AI DN E + A + P+ R L ++ Y IA++G+HGK+T+
Sbjct: 70 ---IDCFVYTAAISPDNPEWIAASASKKPMLTRAQLLGQIMSHYPESIAIAGTHGKTTST 126
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM++ +L T VG + ++ G FV EA EY FL P +V+
Sbjct: 127 SMMSMLLLESDQKPTISVGGILDAI-HSNVHVGNSDRFVAEACEYTNSFLEFYPKYSVIL 185
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ EH+D F+D D ++ F+RF + G LVI G+ +SL+ +K D
Sbjct: 186 NIEAEHLDFFKDLDDIRRSFKRFAENTADKGLLVINGEINDWQSLVADVKSD-------- 237
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+ TYGF DWY + + G + +I R + L I L +
Sbjct: 238 -----------------VQTYGFDDSCDWYPSQISYDHFGCASFIPHFRQQTLPLIRLHV 280
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG HN+ N+L+V+A + + + E A KF G RRF G +G + D
Sbjct: 281 PGRHNIGNALSVLAVAHRMGLSEEEIREGFA-------KFHGADRRFQYKGKFHGATVID 333
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHPTE+RA L AA+ +P+K ++ VFQPHTY+R +DFA+ALS ADQV+++ +
Sbjct: 334 DYAHHPTEIRASLAAAKN-YPHKRIVVVFQPHTYTRTKAFLEDFADALSAADQVILADI 391
>gi|383830926|ref|ZP_09986015.1| UDP-N-acetylmuramate--alanine ligase [Saccharomonospora
xinjiangensis XJ-54]
gi|383463579|gb|EID55669.1| UDP-N-acetylmuramate--alanine ligase [Saccharomonospora
xinjiangensis XJ-54]
Length = 474
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 146/416 (35%), Positives = 215/416 (51%), Gaps = 36/416 (8%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
H +GIGG+G+S +A++ L +G VSGSD S L GA + +G N+ D +
Sbjct: 18 HLIGIGGAGMSGIARILLARGARVSGSDAKDSRAFLTLRAQGARIAVGQRAENLDVFDDA 77
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
P+AVV S+AI + N E++ A+ GVP+ R LA L E + + ++G+HGK++T SM
Sbjct: 78 --PSAVVVSTAIKETNPELVVARERGVPVLHRAEALAALMEGHRVACIAGTHGKTSTTSM 135
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
L L+ D + +G + + + +G G FV EADE DG FL SPSVAVVTN+
Sbjct: 136 LTVALQHCRLDPSFAIGGDLNE-SGANAHHGEGGIFVAEADESDGSFLSYSPSVAVVTNV 194
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVV 318
+ +H+D DA ++F F+++I GG LV+C D L G+ + GV
Sbjct: 195 EPDHLDHHGTADAYHAVFSEFVRRIEPGGVLVLCADDPATTEL-------AGVAEAAGV- 246
Query: 319 SNQSSDLWGQGHDYKIITYGFSSF--NDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++ YG S+ +D P GG+ ++ L +++ +
Sbjct: 247 --------------RVRRYGRSAIGASDATVLEYLPGEDGGTVRVVLGGEELLVRVA--V 290
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG H N++ + L L D+ A L L+ F GV RRF+ G +YD
Sbjct: 291 PGEHMAFNAVGALLAGLELGADR-------AALIEGLAAFGGVRRRFEFKGRAADVRVYD 343
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
D+AHHPTEV A L+A RQ ++ VFQPH YSR +FA+AL AD+VVV
Sbjct: 344 DYAHHPTEVAAQLRAVRQTAGGGRVVVVFQPHLYSRTKAFAGEFADALGLADEVVV 399
>gi|427412442|ref|ZP_18902634.1| UDP-N-acetylmuramate-alanine ligase [Veillonella ratti
ACS-216-V-Col6b]
gi|425716249|gb|EKU79233.1| UDP-N-acetylmuramate-alanine ligase [Veillonella ratti
ACS-216-V-Col6b]
Length = 457
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 139/420 (33%), Positives = 220/420 (52%), Gaps = 45/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH +GI GSG+ A+A + + QGFEVSGSD+ S+ E + GA +HIGH+ ++G D
Sbjct: 8 IHLIGIAGSGMRAIANILISQGFEVSGSDIQESAVTERFRKMGATIHIGHNAEYVKGVD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
AVV S+AI DN E++ A+ + +PI R + + + IAV+G+HGK+TT S
Sbjct: 67 -----AVVRSTAIHADNPELMAAQELQIPILHRSDIVKAVLDITKGIAVAGAHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
ML + D T I+G V + GS +G G+ + EADE DG FL L+P V+TN
Sbjct: 122 MLGQIFVEASLDPTVIIGGEV-DYLGGSSQWGRGEYSIAEADESDGSFLKLNPKAIVITN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
++ +H+D + + + F F+ ++ G V+CGD+ + ++ ++
Sbjct: 181 IENDHMDHYGTMEHLLDAFCEFVGKLPKDGTAVVCGDNPSIQKVMPRV------------ 228
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
D + +TYG ND+ A ++ +G Y + +A I L++P
Sbjct: 229 -------------DRQFVTYGLGEGNDYTARNIHYE-KGILVYEAMKGNEVVATIRLKVP 274
Query: 378 GVHNVLNSLA--VIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
G HN LNSL V+AT + D + L+KF G RRF+ G + G +
Sbjct: 275 GTHNALNSLGAFVMATRCGVPAD---------VVVAALAKFTGAKRRFETKGHVKGVWVV 325
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHPTE+ A L AA+ + ++ +FQPH ++R +L +F A AD + ++ +
Sbjct: 326 DDYAHHPTEIAATLSAAKA-LQSHRVVCIFQPHRFTRTNLLLKEFGKAFENADVLFITDI 384
>gi|260437509|ref|ZP_05791325.1| UDP-N-acetylmuramate--alanine ligase [Butyrivibrio crossotus DSM
2876]
gi|292810142|gb|EFF69347.1| UDP-N-acetylmuramate--alanine ligase [Butyrivibrio crossotus DSM
2876]
Length = 458
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 138/419 (32%), Positives = 217/419 (51%), Gaps = 40/419 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG +S LA + +GF +SGSD S L+ G + IG NI +
Sbjct: 12 VHFIGIGGISMSGLADILFSKGFTISGSDSKESELTRNLISQGIKVFIGQKADNITDD-- 69
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTTA 196
+ VV ++AI DN E+ A++ +P+ R L ++ Y + VSG+HGK+TT
Sbjct: 70 ---IDLVVYTAAIHNDNEELAAARAKNIPVITRAELLGEIMTNYKTAVGVSGTHGKTTTT 126
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SML +L D T VG +P G++ G NFV EA EY FL P++ ++
Sbjct: 127 SMLTEILVNGSLDPTVSVGGILPSI-HGNLRIGHSDNFVTEACEYTNSFLSFFPTIEIIL 185
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F+D + +++ F R+++ + G LVI D +D +++
Sbjct: 186 NIEEDHLDFFKDINDIRNSFGRYVRLLPENGLLVINND-------IDNVEE--------- 229
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+ N + +IT G + D+ A+++ + G Y L +G + +I+L +
Sbjct: 230 IYKNAAC---------PVITVGKTPDADYTADNISFDEFGCPSYDLIRQGNTIGRIALSV 280
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG+HNV NSLA IA + L D I+ + L F G RRF GT+ G I D
Sbjct: 281 PGIHNVYNSLAAIAVAIHLGID-------ISTIIDSLKGFHGTDRRFQKKGTVNGFTIID 333
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHP E+ A + +A +P+K L+ +FQPHTY+R DFA+ L AD V++ +
Sbjct: 334 DYAHHPAEINATINSA-MNYPHKKLVIIFQPHTYTRTKAFLKDFADVLKRADLVILPDI 391
>gi|357037239|ref|ZP_09099039.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfotomaculum gibsoniae
DSM 7213]
gi|355361404|gb|EHG09159.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfotomaculum gibsoniae
DSM 7213]
Length = 459
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 148/418 (35%), Positives = 225/418 (53%), Gaps = 40/418 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG+G+S LA++ L ++V GSD+ + E L GA ++ GH+ +N+ D
Sbjct: 8 IHFIGIGGAGMSGLARVLLDLSYDVRGSDINSTPVTERLKAQGATIYKGHAGANV--GDA 65
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ VV S+AI +N EI A+ GVP+ R L L + +AV+G+HGK+TT++
Sbjct: 66 A----LVVYSTAISDENQEIQAAREKGVPVIHRADLLGLLMRRQKGLAVAGAHGKTTTSA 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
MLA VL+ D T ++G + G+ G G V EADE D FL L P +AVVTN
Sbjct: 122 MLALVLEKCQQDPTILIGGELTDI-GGNAKLGRGAFLVAEADESDRSFLKLRPHLAVVTN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
++ +H+D + + + FR+F+K+I G V+C D R++ K+ G
Sbjct: 181 IEDDHLDHYGSVEEIIYAFRQFIKKIPANGTAVLCFDDGQVRAM---AKECAG------- 230
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
+++TY + + Y G S + +G+ L Q+ L +P
Sbjct: 231 ---------------RLVTYALDNPSADYTMRDVRVDAGRSTGEVYFKGQHLGQLVLAVP 275
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD 437
G HN+ N+LAV+A V IG E + CLK F G RR+ L+G G + DD
Sbjct: 276 GRHNLANALAVVA-VCCDIG--LSFSEVVECLKC----FKGAGRRYQLLGREKGITVIDD 328
Query: 438 FAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
+AHHPTE+ A L+AARQ P + +IAVFQPH Y+R +L + F + +AD V+++ +
Sbjct: 329 YAHHPTEIAATLRAARQVHPGR-VIAVFQPHRYTRTKLLYNRFGSCFGDADLVIINDI 385
>gi|403051115|ref|ZP_10905599.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter bereziniae
LMG 1003]
gi|445419683|ref|ZP_21435327.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter sp. WC-743]
gi|444759499|gb|ELW83966.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter sp. WC-743]
Length = 482
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 143/429 (33%), Positives = 222/429 (51%), Gaps = 49/429 (11%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG+G+ +A++ QG++VSGSD+ S L E G + IGH+ NI+
Sbjct: 21 RIKHIHFVGIGGAGMCGIAEVLKNQGYKVSGSDIKASKTTVQLEENGIKVFIGHAEDNIK 80
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
G N +V S+AI +N+E+ A +P+ +R L +L + IAV+G+HGK+
Sbjct: 81 G------ANVLVVSTAIDPENLEVKAAIENRIPVVRRAEMLGELMRYRHGIAVAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S++ +L D T ++G + + + G + V EADE D FL L P A
Sbjct: 135 TTTSLVTCMLAEENMDPTYVIGGLLNRTGVNAAL-GASRFIVAEADESDASFLHLEPMAA 193
Query: 254 VVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
+VTN+D +H+D + D +K F +FL+++ G V+CGD R ++ +I +
Sbjct: 194 IVTNIDADHMDTYGGSFDVLKDTFVKFLQKMPFYGLAVVCGDDANIREIMPRIGR----- 248
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLA 370
++TYGF+ ND A + Q G S + + +GR
Sbjct: 249 --------------------PVVTYGFNEDNDIRAIDID---QTGMQSSFTVLRKGREPL 285
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
++++ +PG+HN+LN+LA I G S A + L F GV RRF + G
Sbjct: 286 RLTINLPGLHNILNALAAI-------GIATDEGVSDAAIARALESFSGVGRRFQVQGEYP 338
Query: 431 ----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
+ DD+ HHP EV A ++AAR P++ L+ +FQPH +SR DDF + LS+
Sbjct: 339 LDEGTVKLVDDYGHHPKEVEATIKAARASHPDRRLVMMFQPHRFSRTRDCFDDFVDVLSQ 398
Query: 487 ADQVVVSAV 495
DQ+++ V
Sbjct: 399 VDQLLLLEV 407
>gi|295107917|emb|CBL21870.1| UDP-N-acetylmuramate--L-alanine ligase [Ruminococcus obeum A2-162]
Length = 459
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 148/428 (34%), Positives = 219/428 (51%), Gaps = 41/428 (9%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DF ++ IHF+GIGG +S LA++ L++GF +SGSD S L GA + G
Sbjct: 4 IDF-HKPLSIHFIGIGGISMSGLAEILLEEGFTISGSDSKKSPLTSLLESKGAKIFYGQR 62
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVS 187
SNI S VV ++AI DN E AK G+P+ R L ++ Y+ IAV+
Sbjct: 63 ASNI-----SDSVQVVVYTAAIHPDNPEFACAKEKGLPMLTRAQLLGQIMRNYDTSIAVA 117
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT SML+++L D T VG +P G+I G + F+ EA EY FL
Sbjct: 118 GTHGKTTTTSMLSHILLKGECDPTISVGGILPAI-GGNIRVGQSETFLTEACEYTNSFLS 176
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P++ ++ N+D +H+D F+D D ++ FR+F + + G L+I D+
Sbjct: 177 FFPTLGIILNMDADHLDFFKDIDDIRHSFRKFAELLPADGALIINADTP----------- 225
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR 367
KY ++ + K+ITYG ++ A + + G + + G
Sbjct: 226 ----KY----------EMVAENLPCKVITYGLEHDAEYTASDITYDEFGHPTFHVLHNGE 271
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
+ SL++PG+HNV N+LA IA L D + L F G RRF G
Sbjct: 272 DIGICSLKVPGIHNVSNALASIAAGRLLDLDNE-------VIFAGLKDFGGTDRRFQYKG 324
Query: 428 TIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ I DD+AHHPTE+ A L AA +P+K + VFQPHTY+R L +FA AL+ A
Sbjct: 325 KVGEVTIIDDYAHHPTEIEATLHAA-HNYPHKKIWCVFQPHTYTRTKALLPEFAKALTLA 383
Query: 488 DQVVVSAV 495
D VV++ +
Sbjct: 384 DHVVLADI 391
>gi|171316209|ref|ZP_02905432.1| UDP-N-acetylmuramate/alanine ligase [Burkholderia ambifaria MEX-5]
gi|171098623|gb|EDT43420.1| UDP-N-acetylmuramate/alanine ligase [Burkholderia ambifaria MEX-5]
Length = 465
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 150/426 (35%), Positives = 217/426 (50%), Gaps = 48/426 (11%)
Query: 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGND 136
IHFVGIGG+G+S +A++ + G+EVSGSDL ++ + L GA + IGH +NI G
Sbjct: 7 QIHFVGIGGAGMSGIAEVLVNLGYEVSGSDLSRNAVTDRLEALGARIAIGHDAANIAG-- 64
Query: 137 GSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
NAVV S+A+ DN E+L A+ GVPI +R LA+L IA++G+HGK+TT
Sbjct: 65 ----ANAVVVSTAVRSDNPEVLAARHQGVPIVQRAVMLAELMRLKQGIAIAGTHGKTTTT 120
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
S++A VL A G D T ++G + + G G V EADE D FL L P + V+T
Sbjct: 121 SLVASVLAAGGLDPTFVIGGRLIS-AGANARLGTGDFIVAEADESDASFLNLYPVIEVIT 179
Query: 257 NLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
N+D +H+D + D +K F F +++ G V+C D R ++ I +
Sbjct: 180 NIDADHMDTYGHDFARLKQAFIEFTQRLPFYGSAVVCVDDPNVRQIIPFISK-------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQ 375
++ YG S AE + G + + GR + L
Sbjct: 232 -----------------PVVRYGLSPDAQVRAEDIDAR-DGRMHFTVIREGRAPLAVVLN 273
Query: 376 IPGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH- 433
+PG+HNV N+LA IA L + D ++L L++F GV RRF G +
Sbjct: 274 LPGLHNVQNALAAIAIATDLGVSDD--------AIQLALAEFNGVGRRFQRYGEVPSADG 325
Query: 434 ----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
+ DD+ HHP E+ A + AAR FP + L+ FQPH Y+R DDF N LS D
Sbjct: 326 GQYTLIDDYGHHPVEMAATVAAARGAFPGRRLVLAFQPHRYTRTRDCFDDFVNVLSTVDA 385
Query: 490 VVVSAV 495
+V++ V
Sbjct: 386 LVLTEV 391
>gi|316933187|ref|YP_004108169.1| UDP-N-acetylmuramate--L-alanine ligase [Rhodopseudomonas palustris
DX-1]
gi|315600901|gb|ADU43436.1| UDP-N-acetylmuramate/alanine ligase [Rhodopseudomonas palustris
DX-1]
Length = 468
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 157/429 (36%), Positives = 230/429 (53%), Gaps = 52/429 (12%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G+ V GSD S+ + L + G +H+GH NI+G
Sbjct: 8 GPIHFVGIGGIGMSGIAEVLCNLGYTVQGSDASESANVNRLRDKGIQIHVGHQADNIKGA 67
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D +V S+AI +DN E+L A++ +P+ +R LA+L + +A++G+HGK+TT
Sbjct: 68 D------VLVVSTAIKRDNPELLAARAQRIPVVRRAEMLAELMRLKSCVAIAGTHGKTTT 121
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L A D T I G + + + G G V+EADE DG FL L VA+V
Sbjct: 122 TSMVAALLDAGDLDPTVINGGIINAYGTNARL-GAGDWMVVEADESDGTFLKLPADVAIV 180
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D F+ DAV+ FR F++ + G V+C D ++L+ +I+
Sbjct: 181 TNVDPEHLDHFKTFDAVQDAFRNFVENVPFYGFAVMCIDHPVVQTLVGKIE--------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR------PL 369
D +IITYG + D + P+ GGS + + R R +
Sbjct: 232 ---------------DRRIITYGENPQADARLLDLTPS-GGGSTFKVAFRDRKAGTAHEI 275
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHE---SIACLKLPLSKFMGVSRRFDLI 426
A + L +PG HN LN+ A IA +HE S ++ L+ F GV RRF
Sbjct: 276 ADLMLPMPGRHNALNATAAIAV----------AHELGLSDDTIRKALAAFGGVRRRFTKT 325
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G G I DD+ HHP E+ AVL+AARQ K +IAV QPH ++RL L ++F ++
Sbjct: 326 GEWNGVTIIDDYGHHPVEIAAVLKAARQSTAGK-VIAVVQPHRFTRLQSLFEEFCTCFND 384
Query: 487 ADQVVVSAV 495
AD V+V+ V
Sbjct: 385 ADAVIVADV 393
>gi|422644417|ref|ZP_16707555.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|330957969|gb|EGH58229.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 486
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 156/429 (36%), Positives = 221/429 (51%), Gaps = 49/429 (11%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG G+ +A++ L G+EVSGSDL S+ E L GA + +GH N
Sbjct: 15 RIRRIHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKSSAVTERLESFGAQIFLGHRAENTI 74
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
G+D +V SSAI N E+ A +P+ R LA+L + IAV+G+HGK+
Sbjct: 75 GSD------VLVVSSAINTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKT 128
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S++A V A G D T ++G + + G + + EADE D FL L P VA
Sbjct: 129 TTTSLIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVA 187
Query: 254 VVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
VVTN+D +H+ +E D + +K F FL + G V+C D R +L +K+ T
Sbjct: 188 VVTNIDADHMATYEGDFNKLKKTFVEFLHNLPFYGLAVMCVDDPVVREILPLVKRPT--- 244
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLA 370
+TYGFS D A +V Q G + + + R R
Sbjct: 245 ----------------------MTYGFSEEADVRAINVR---QDGMLTFFTVLRRDREPL 279
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+S+ +PG HNVLNSLA IA + D+ S E+I LS F GV RRF + G +
Sbjct: 280 DVSVNMPGNHNVLNSLATIA----IATDEGVSDEAIVK---GLSGFQGVGRRFQIYGELP 332
Query: 431 ----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
+ DD+ HHP EV AV+ A R +P++ L+ V+QPH +SR L DDF L++
Sbjct: 333 VEGGNVMLVDDYGHHPREVAAVINAVRGGWPDRRLVMVYQPHRFSRTRDLYDDFVQVLAD 392
Query: 487 ADQVVVSAV 495
A+ +++ V
Sbjct: 393 ANVLLLMEV 401
>gi|296133658|ref|YP_003640905.1| UDP-N-acetylmuramate--L-alanine ligase [Thermincola potens JR]
gi|296032236|gb|ADG83004.1| UDP-N-acetylmuramate/alanine ligase [Thermincola potens JR]
Length = 459
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 152/419 (36%), Positives = 224/419 (53%), Gaps = 44/419 (10%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
HF+GIGG+G+S LA++ L++G VSGSD+ S L E GA +++GHS NI S
Sbjct: 9 HFIGIGGAGMSGLARILLQKGMRVSGSDIKSSRTFSQLKELGAKVYLGHSRENI-----S 63
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
VV SSAI DN E+ A+ G+ I R LA L + IAV+G+HGK+TT SM
Sbjct: 64 EEIRVVVVSSAISPDNEELAEARKKGLKILHRGDVLAGLMAEKKGIAVAGAHGKTTTTSM 123
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGS-IFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+A VL+ G D T +VG + F GS G G+ V EADE DG FL LSP + V+TN
Sbjct: 124 IALVLEKNGLDPTVVVGGEL--FDIGSNAKLGKGEYLVAEADESDGSFLKLSPYIEVITN 181
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
++ +H+D + + + + F+ F ++I G ++C +S + L D++K+
Sbjct: 182 IEDDHLDYYGSTEKIDAAFQEFTEKIPDEGFCILCFNSPKVKVLADKLKK---------- 231
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESV-CPNVQGGSDYILCERGRPLAQISLQI 376
I+YG ++ ++ C Q D R L ++ L +
Sbjct: 232 ---------------PFISYGIGVPAEYEGRNILCQGTQSSVDVFY--RNEYLGKLRLNV 274
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG HN+ N+LA V L+G S E +A L+ F GV RRF LIG + G + D
Sbjct: 275 PGEHNLANALAA-LAVGRLVG---LSFEQVAD---ALASFTGVGRRFQLIGQVKGITVVD 327
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHPTE++A LQAAR+ + +I+VFQPH ++R L F A D ++++ +
Sbjct: 328 DYAHHPTELKATLQAARKAGFAR-IISVFQPHRFTRTKFLYKQFGEAFHGPDIIIITEI 385
>gi|365922254|ref|ZP_09446484.1| UDP-N-acetylmuramate--L-alanine ligase [Cardiobacterium valvarum
F0432]
gi|364574716|gb|EHM52162.1| UDP-N-acetylmuramate--L-alanine ligase [Cardiobacterium valvarum
F0432]
Length = 465
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 157/427 (36%), Positives = 224/427 (52%), Gaps = 52/427 (12%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+ FVGIGG G+SA+A++ + G+ VSGSDL S+ E L GA + GHS N+ D
Sbjct: 7 VFFVGIGGVGMSAIAEVLITLGYAVSGSDLKPSANTERLQAKGATVFFGHSAENV--GDA 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
S VV SSAI N E+LHA+ +G+P+ +R LA+L IAV+G+HGK+TT S
Sbjct: 65 S----VVVTSSAIDPANPEVLHARELGIPVIRRAEMLAELMRFRFGIAVAGTHGKTTTTS 120
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A +L G D T ++G V + G G+ V EADE D FL L P ++VVTN
Sbjct: 121 LIASILADAGLDPTFVIGG-VLTAAGSNARLGDGQYLVAEADESDASFLFLQPMISVVTN 179
Query: 258 LDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H++ + D +K F RFL + G V+C D + RS+L ++ +
Sbjct: 180 IDADHLENYGGSFDNLKQGFVRFLHNLPFYGLAVMCVDDEGVRSVLSEVGR--------- 230
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYIL----CERGRPLAQI 372
+ TYGFS D A +V Q G D + RG +
Sbjct: 231 ----------------PVRTYGFSEQADLRAVNVR---QVGLDMLFDVVDKVRGETF-PL 270
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC 432
SL +PG HNVLN+LA L + + HE I L +F GV RRF G I
Sbjct: 271 SLSMPGKHNVLNALA----ALIVCSELGLPHEDIVA---GLRQFKGVGRRFTYHGVIAHE 323
Query: 433 H----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
H +++D+ HHP E+RAVL AA++ F + + AVFQPH ++R DDFA L+ +
Sbjct: 324 HGTAEVFEDYGHHPNEIRAVLAAAKEGFAGRRIFAVFQPHRFTRTRDCLDDFAEVLANCE 383
Query: 489 QVVVSAV 495
+V++ V
Sbjct: 384 ALVLTDV 390
>gi|229588491|ref|YP_002870610.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas fluorescens
SBW25]
gi|259509778|sp|C3KCT1.1|MURC_PSEFS RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|229360357|emb|CAY47214.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas fluorescens
SBW25]
Length = 481
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 155/428 (36%), Positives = 219/428 (51%), Gaps = 47/428 (10%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG G+ +A++ L G++VSGSDL S + L GA + IGH N
Sbjct: 15 RIRRIHFVGIGGVGMCGIAEVLLNLGYQVSGSDLKESPVTDRLKSFGAQIFIGHRAENAA 74
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
D +V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+
Sbjct: 75 EAD------VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKT 128
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S++A V A G D T ++G + + G + + EADE D FL L P VA
Sbjct: 129 TTTSLIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVA 187
Query: 254 VVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
VVTN+D +H+ ++ D + +K F FL + G V+C D R +L Q+K+ T
Sbjct: 188 VVTNIDADHMATYDGDFNKLKKTFVEFLHNLPFYGLAVVCLDDPVVREILPQVKRPT--- 244
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER-GRPLAQ 371
+TYGFS D A +V +G Y R R
Sbjct: 245 ----------------------VTYGFSEDADVRAINV--RQEGMQTYFTVLRPDREPLD 280
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY- 430
+S+ +PG HNVLNSLA I + D+ S E+I LS+F GV RRF + G +
Sbjct: 281 VSVNMPGNHNVLNSLATIC----IATDEGVSDEAIVE---GLSRFAGVGRRFQVYGQLPV 333
Query: 431 ---GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ DD+ HHPTEV AV++A R +P + L+ V+QPH YSR L DDF N L++A
Sbjct: 334 EGGDVMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVNVLADA 393
Query: 488 DQVVVSAV 495
+ +++ V
Sbjct: 394 NVLLLMEV 401
>gi|440738881|ref|ZP_20918403.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas fluorescens
BRIP34879]
gi|447915298|ref|YP_007395866.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas poae RE*1-1-14]
gi|440380253|gb|ELQ16820.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas fluorescens
BRIP34879]
gi|445199161|gb|AGE24370.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas poae RE*1-1-14]
Length = 481
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 155/428 (36%), Positives = 219/428 (51%), Gaps = 47/428 (10%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG G+ +A++ L G++VSGSDL S + L GA + IGH N
Sbjct: 15 RIRRIHFVGIGGVGMCGIAEVLLNLGYQVSGSDLKESPVTDRLKTFGAQIFIGHRAENAA 74
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
D +V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+
Sbjct: 75 EAD------VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKT 128
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S++A V A G D T ++G + + G + + EADE D FL L P VA
Sbjct: 129 TTTSLIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPMVA 187
Query: 254 VVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
VVTN+D +H+ ++ D + +K F FL + G V+C D R +L Q+K+ T
Sbjct: 188 VVTNIDEDHMATYDGDFNKLKKTFVEFLHNLPFYGLAVLCLDDPVVREILPQVKRPT--- 244
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER-GRPLAQ 371
+TYGFS D A +V +G Y R R
Sbjct: 245 ----------------------VTYGFSEDADVRAINV--RQEGMQTYFTVLRPDREPLD 280
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY- 430
+S+ +PG HNVLNSLA I + D+ S E+I LS+F GV RRF + G +
Sbjct: 281 VSVNMPGNHNVLNSLATIC----IASDEGVSDEAIVE---GLSRFAGVGRRFQVYGQLPV 333
Query: 431 ---GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ DD+ HHPTEV AV++A R +P + L+ V+QPH YSR L DDF N L++A
Sbjct: 334 DGGDVMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVNVLADA 393
Query: 488 DQVVVSAV 495
+ +++ V
Sbjct: 394 NVLLLMEV 401
>gi|225028221|ref|ZP_03717413.1| hypothetical protein EUBHAL_02493 [Eubacterium hallii DSM 3353]
gi|224954533|gb|EEG35742.1| UDP-N-acetylmuramate--L-alanine ligase [Eubacterium hallii DSM
3353]
Length = 466
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 141/428 (32%), Positives = 225/428 (52%), Gaps = 41/428 (9%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DF+ + +HF+GIGG +S LA++ L + F V+GSD+ S + L E GA + IG
Sbjct: 10 IDFQ-KPIHVHFIGIGGISMSGLAEILLNRHFTVTGSDMQASDMTKHLEETGAKVVIGQK 68
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVS 187
NI + + VV ++AI + N E AK+ G+P+ R L ++ + IAV+
Sbjct: 69 AENITDD-----IDLVVYTAAIHESNEEFAAAKNKGIPMMTRAALLGQIMANFAKSIAVA 123
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT SML ++L D T VG + + G+I G F+ EA EY FL
Sbjct: 124 GTHGKTTTTSMLTHILLQADTDPTVSVGGMLDRIG-GNIRVGHSDLFLTEACEYTNSFLE 182
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P +++ N++ +H+D F+D + +K+ F +F Q G ++I GD +L+ + Q
Sbjct: 183 FYPLYSIILNVEEDHMDFFKDIEDIKNSFHKFASQTADDGLIIINGDMGHTDFILNGLSQ 242
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR 367
K +T+G + ND+ A + + +G + Y L G+
Sbjct: 243 -------------------------KHVTFGLNPDNDYTAADITFDKEGNASYNLIAHGQ 277
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
+I+L++ G HNV+NSLA IA IG + ++ L F G RRF+ G
Sbjct: 278 EKGRITLKVKGRHNVMNSLAAIACT-EAIG------LPLDAIRKGLLSFGGTHRRFEYKG 330
Query: 428 TIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
++ + DD+AHHPTE+RA L AA+ +P+ L +FQPHTY+R +FA AL +A
Sbjct: 331 SLGDVTVIDDYAHHPTEIRATLSAAKD-YPHDELWVIFQPHTYTRTKAFLPEFAKALEQA 389
Query: 488 DQVVVSAV 495
D +V++ +
Sbjct: 390 DHIVLADI 397
>gi|38234172|ref|NP_939939.1| UDP-N-acetylmuramate--L-alanine ligase [Corynebacterium diphtheriae
NCTC 13129]
gi|375291252|ref|YP_005125792.1| UDP-N-acetylmuramate-L-alanine ligase [Corynebacterium diphtheriae
241]
gi|376246087|ref|YP_005136326.1| UDP-N-acetylmuramate--L-alanine ligase [Corynebacterium diphtheriae
HC01]
gi|48428297|sp|P61677.1|MURC_CORDI RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|38200434|emb|CAE50122.1| UDP-N-acetylmuramate--alanine ligase [Corynebacterium diphtheriae]
gi|371580923|gb|AEX44590.1| UDP-N-acetylmuramate-L-alanine ligase [Corynebacterium diphtheriae
241]
gi|372108717|gb|AEX74778.1| UDP-N-acetylmuramate-L-alanine ligase [Corynebacterium diphtheriae
HC01]
Length = 477
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 141/424 (33%), Positives = 219/424 (51%), Gaps = 37/424 (8%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H +GIGG+G+S +A++ L G VSGSD+ S + L GA + +GH N+ G
Sbjct: 9 VHMIGIGGAGMSGVARILLSCGSVVSGSDVKESRPVAALRAMGATIAVGHKAENL-AISG 67
Query: 138 SRFPNAVVAS-SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
S P VV S +AIPQDN E+ A++ +P+ +R L +L E + + ++G+HGK++T
Sbjct: 68 S-MPTVVVTSFAAIPQDNPELQEARANNIPVIRRSDLLGELMEDHQQVLIAGTHGKTSTT 126
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM L+A G D + +G + + + G GK FV EADE D L P +AVVT
Sbjct: 127 SMAVVALQAAGKDPSFAIGGQLNKAGTNA-HDGTGKAFVAEADESDASLLRYKPDIAVVT 185
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F+ +A +F F ++++ GG LV+C D A +L ++ K ++ G
Sbjct: 186 NIEPDHLDFFKTSEAYFKVFDDFAERVQPGGTLVVCLDDPHAAALGEKFKDRMTVRGYGS 245
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+ Q Y + + + + G D + + ++I
Sbjct: 246 PAAAQQ---------YPDVAFTVVEHMEVGPAGTRARITVGDDTV---------DVIMRI 287
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG----- 431
PG H VLN+ A + +T + + L +S F GV RRF+ G + G
Sbjct: 288 PGHHMVLNACAALTAGVT-------AGAELERLAAGISDFSGVRRRFEFHGRVSGGAFHD 340
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKAL---IAVFQPHTYSRLVVLKDDFANALSEAD 488
+YDD+AHHPTEV AVL+AARQ+ + + + FQPH YSR + +FA ALS AD
Sbjct: 341 AEVYDDYAHHPTEVTAVLKAARQQQEARGIGRVVVAFQPHLYSRTMEFAAEFAEALSLAD 400
Query: 489 QVVV 492
V+
Sbjct: 401 HAVI 404
>gi|134294648|ref|YP_001118383.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia vietnamiensis
G4]
gi|387901232|ref|YP_006331571.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia sp. KJ006]
gi|166222968|sp|A4JB95.1|MURC_BURVG RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|134137805|gb|ABO53548.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia vietnamiensis
G4]
gi|387576124|gb|AFJ84840.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia sp. KJ006]
Length = 465
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 149/425 (35%), Positives = 219/425 (51%), Gaps = 48/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ + G+EVSGSDL ++ + L GA + IGH +NI+G
Sbjct: 8 IHFVGIGGAGMSGIAEVLVNLGYEVSGSDLSRNAVTDRLAALGARIAIGHDAANIEG--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
NAVV S+A+ DN E+L A+ VPI +R LA+L IA++G+HGK+TT S
Sbjct: 65 ---ANAVVVSTAVRSDNPEVLAARHQRVPIVQRAVMLAELMRLKQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL A G D T ++G + + G G V EADE D FL L P + V+TN
Sbjct: 122 LVASVLAAGGLDPTFVIGGRLIS-AGANARLGTGDFIVAEADESDASFLNLYPVIEVITN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D +K F F +++ G V+C D R ++ I +
Sbjct: 181 IDADHMDTYGHDFARLKQAFIEFTQRLPFYGSAVVCVDDPNVRQIIPFISK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++ YG S+ AE++ G + + GR + L +
Sbjct: 232 ----------------PVVRYGLSADAQVRAENIDAR-DGRMHFTVIREGRSPLAVVLNL 274
Query: 377 PGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH-- 433
PG+HNV N+LA IA L + D ++L L++F GV RRF G +
Sbjct: 275 PGLHNVQNALAAIAIATDLGVSDD--------AIQLALAEFNGVGRRFQRYGEVPSADGG 326
Query: 434 ---IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP E+ A + AAR FP + L+ FQPH Y+R DDF N LS D +
Sbjct: 327 QYTLIDDYGHHPVEMAATIAAARGAFPGRRLVLAFQPHRYTRTRDCFDDFVNVLSTVDAL 386
Query: 491 VVSAV 495
V++ V
Sbjct: 387 VLTEV 391
>gi|402306599|ref|ZP_10825640.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus sputorum HK
2154]
gi|400374554|gb|EJP27471.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus sputorum HK
2154]
Length = 475
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 152/472 (32%), Positives = 241/472 (51%), Gaps = 68/472 (14%)
Query: 61 FKRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAG 120
F+ + +V R IHF+GIGG+G+S +A++ L +G+++SGSD+ S+ + L +AG
Sbjct: 4 FQDKIKKLVPEMRRVNQIHFIGIGGAGMSGIAEVLLNEGYKISGSDIAESAVTQRLAKAG 63
Query: 121 ANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEK 180
A + IGH+ NIQG + VVASSAI N E+ AK+ +P+ +R LA++
Sbjct: 64 ATVFIGHAAENIQG------ASVVVASSAIDDSNPEVAAAKAARIPVIQRAQMLAEIMRF 117
Query: 181 YNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN------- 233
+ IAV+G+HGK+TT +M++ + D P F +G + GKN
Sbjct: 118 RHGIAVAGTHGKTTTTAMISMIYTEAKLD---------PTFVNGGLVKSAGKNAHLGASR 168
Query: 234 -FVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVI 291
+ EADE D FL L P V+VVTN++ +H+D + D + +K+ + +FL+ + G V+
Sbjct: 169 YLIAEADESDASFLHLQPMVSVVTNIEPDHMDTYGGDFEKMKATYVKFLRNLPFYGLAVM 228
Query: 292 CGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVC 351
C D + + Q+ + +++TYGFS D+ E
Sbjct: 229 CADDETVMEIAPQVGR-------------------------QVMTYGFSEKADYRIEDYQ 263
Query: 352 PNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKL 411
G ++C G + ++ L +PG HN LN+ A +A K + E+ A L
Sbjct: 264 QTGFQGHYTVVCPTGERI-EVLLNVPGKHNALNATAALAVA------KEEGIENEAILA- 315
Query: 412 PLSKFMGVSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQP 467
L+ F G RRFD +G+ + DD+ HHPTEV ++AARQ + K ++ VFQP
Sbjct: 316 ALADFQGAGRRFDQLGSFIRPNGKVMLVDDYGHHPTEVDVTIKAARQGWEGKRVVMVFQP 375
Query: 468 HTYSRLVVLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
H YSR L DDF LS+ D +V+ L ++A ++ A + +C
Sbjct: 376 HRYSRTRDLFDDFVQVLSQVDALVM-------LDVYAAGEAPIVGADSKSLC 420
>gi|329122143|ref|ZP_08250751.1| UDP-N-acetylmuramate--L-alanine ligase [Dialister micraerophilus
DSM 19965]
gi|327466950|gb|EGF12466.1| UDP-N-acetylmuramate--L-alanine ligase [Dialister micraerophilus
DSM 19965]
Length = 463
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 144/428 (33%), Positives = 231/428 (53%), Gaps = 50/428 (11%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
N HFVGIGG G+ ALAK+ + +G+ +SGSD V+SS +E L + G + +GH+ NI
Sbjct: 4 NNYKRFHFVGIGGVGMRALAKIMIDKGYMISGSDNVYSSELENLRKLGVEIFVGHNPQNI 63
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
+ D ++ S+AI ++N E+L AK +P++ R LA + I V+G+HGK
Sbjct: 64 KNAD------VLIVSTAISKNNSEVLEAKKHKIPVFHRSDLLAAILCGGKSICVAGAHGK 117
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
STT++M+ V T ++G V SIF G G+ + EADE DG FL +P +
Sbjct: 118 STTSAMIGKVFCDAEKHPTVVLGGKVDYLNGNSIF-GNGEFVIAEADESDGSFLKFNPFI 176
Query: 253 AVVTNLDWEHVDIFEDEDAVKSIFRRFLKQI-RVGGHLVICGDSQCARSLLDQIKQDTGL 311
+V+TN++ +H+D + + +K+ F +F+ Q ++ G+ ++C D++ +S+L ++ +++ +
Sbjct: 177 SVITNIEDDHLDHYLTVENIKNAFIKFINQTDKINGNTILCIDNEGVKSILPKLDENSYI 236
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITY----GFSSFNDWYAESVCPNVQGGSDYILCERGR 367
Y G N +YK I + F+ ++ ES
Sbjct: 237 TY--GTSDNA---------EYKAINKRYIDSYMMFDVYHKESF----------------- 268
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
L +SL IPG HNV N+LA + T L D + +S L +F GV RRF I
Sbjct: 269 -LGTVSLMIPGTHNVRNALAALVTGLICGIDFKTIVKS-------LMEFNGVKRRFQ-IK 319
Query: 428 TIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
I DD+AHHPTE+ + L+AA++ ++ +I FQPH YSR +LK +FANA A
Sbjct: 320 YSGEVKIVDDYAHHPTEIMSTLKAAKECGKHR-VICAFQPHRYSRTNLLKYEFANAFDNA 378
Query: 488 DQVVVSAV 495
D + ++ +
Sbjct: 379 DIIFITDI 386
>gi|325294545|ref|YP_004281059.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064993|gb|ADY73000.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 458
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 130/398 (32%), Positives = 206/398 (51%), Gaps = 39/398 (9%)
Query: 98 QGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEI 157
QG+EV GSD+ SS ++ L E G + IGH N+ G N V+ SSA+ DNVE+
Sbjct: 27 QGYEVQGSDIKESSMVKKLREEGIRVFIGHKAENVHG------ANLVIHSSAVKFDNVEL 80
Query: 158 LHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAH 217
AK++G+P+ R L+ + +AV+G+HGK+TT+SM+A + G T +VG
Sbjct: 81 QEAKNLGIPVIPRADILSDIMRFKEGVAVAGTHGKTTTSSMIATIFHIAGLKPTILVGGR 140
Query: 218 VPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFR 277
+ + G G V EADE DG FL L+P+ +V+TN+D +HVD + + +K F
Sbjct: 141 LSILGGVNAQSGDGNWLVAEADESDGTFLKLTPTFSVITNIDADHVDYYGSFENLKEAFL 200
Query: 278 RFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITY 337
F ++ G + +CG+ Q + ++ I + + + Y
Sbjct: 201 DFANRVSFYGKVFLCGECQNVKEIVGSIYK-------------------------RKLIY 235
Query: 338 GFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIG 397
GFS D YA+ + P V G+ + + + + L ++ L +PG HN+LN+L I L +
Sbjct: 236 GFSEKFDLYAKEIVP-VGLGTIFDVYYKSKKLGRVKLNVPGKHNILNALGAIGVSLEVGV 294
Query: 398 DKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFP 457
Q ES L F +RR +L GT+ G DD+AHHPTE+ +A + FP
Sbjct: 295 SFNQIAES-------LEMFRNANRRMELKGTVNGITFIDDYAHHPTEIETSYKALKSSFP 347
Query: 458 NKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
++ ++ +FQPH +SR +L +F L E D + +S +
Sbjct: 348 DRRIVVLFQPHRFSRTNLLWKEFVKVLKEIDNLFISDI 385
>gi|28871542|ref|NP_794161.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213966566|ref|ZP_03394717.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas syringae pv.
tomato T1]
gi|302059793|ref|ZP_07251334.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
tomato K40]
gi|302131740|ref|ZP_07257730.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|422658110|ref|ZP_16720547.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|37999568|sp|Q87WY6.1|MURC_PSESM RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|28854793|gb|AAO57856.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213928416|gb|EEB61960.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas syringae pv.
tomato T1]
gi|331016735|gb|EGH96791.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
lachrymans str. M302278]
Length = 486
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 156/425 (36%), Positives = 221/425 (52%), Gaps = 49/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G+EVSGSDL S+ E L GA + +GH N G D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKGSAVTERLESFGAQIFVGHRAENTVGAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 78 -----VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ + D + +K F FL + G V+C D R +L +K+ T
Sbjct: 192 IDADHMATYGGDFNKLKKTFVEFLHNLPFYGLAVMCIDDPVVRDILPLVKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLAQISL 374
+TYGFS +D A +V Q G + + + R R +S+
Sbjct: 245 ------------------MTYGFSEDSDVRAINVR---QDGMLTFFTVLRRDREPLDVSV 283
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG--TIYGC 432
+PG HNVLNSLA IA + D+ S E+I LS F GV RRF + G + G
Sbjct: 284 NMPGNHNVLNSLATIA----IATDEGVSDEAIVQ---GLSGFQGVGRRFQVYGELPVEGG 336
Query: 433 HIY--DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
H+ DD+ HHP EV AV+ A R +P++ L+ V+QPH +SR L DDF L+EA+ +
Sbjct: 337 HVMLVDDYGHHPREVAAVISAVRGGWPDRRLVMVYQPHRFSRTRDLYDDFVQVLAEANVL 396
Query: 491 VVSAV 495
++ V
Sbjct: 397 LLMEV 401
>gi|354583568|ref|ZP_09002466.1| UDP-N-acetylmuramate/alanine ligase [Paenibacillus lactis 154]
gi|353197448|gb|EHB62929.1| UDP-N-acetylmuramate/alanine ligase [Paenibacillus lactis 154]
Length = 441
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 132/409 (32%), Positives = 223/409 (54%), Gaps = 43/409 (10%)
Query: 88 LSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVAS 147
+SA+A++ L+ G++V+GSD+ E L GA ++IGH+ ++G D VV S
Sbjct: 1 MSAIARVMLEMGYKVTGSDVASQELTEKLAAKGAKIYIGHTAEQVKGAD------LVVYS 54
Query: 148 SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMG 207
+A+ +DNVE + A+ + +P+ R LA+L + +AV+G+HGK+TT+SM+A V++ G
Sbjct: 55 TALSKDNVERVEAEKLNIPVLHRAQMLARLLNERKGVAVAGAHGKTTTSSMIALVMEECG 114
Query: 208 DDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFE 267
D T I+G + + G G++ V EADE DG FL P + VV N++ +H++ ++
Sbjct: 115 ADPTFIIGGEIMNVGTNA-KAGEGEHVVAEADESDGSFLQYHPWLGVVLNIEADHLENYD 173
Query: 268 -DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLW 326
D + +K+ + +FL QI+ G V+C D +++L +++ +
Sbjct: 174 GDFNRLKAAYVQFLSQIKEDGTAVVCADDANIQAILPELRCN------------------ 215
Query: 327 GQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSL 386
+ TYG S D+ A + + S + + RG+ L + L +PG HNV N++
Sbjct: 216 -------VTTYGIHSDADYTATQLVLGDRHVS-FKMLHRGQELGTVELSVPGKHNVYNAM 267
Query: 387 AVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVR 446
A + + L ++ S + + KF G RRF ++G G + DD+AHHPTE+
Sbjct: 268 ATVISCL-------KAGISFEAIARAIVKFNGAKRRFQVLGESNGILVIDDYAHHPTEIE 320
Query: 447 AVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
A + AA+ K +IAVFQP YSR L D F+ A +AD+V+++ +
Sbjct: 321 ATISAAKA--TGKRIIAVFQPQRYSRTFFLLDAFSRAFGDADEVIITDI 367
>gi|262370857|ref|ZP_06064181.1| UDP-N-acetylmuramate-alanine ligase [Acinetobacter johnsonii SH046]
gi|262314219|gb|EEY95262.1| UDP-N-acetylmuramate-alanine ligase [Acinetobacter johnsonii SH046]
Length = 482
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 145/429 (33%), Positives = 221/429 (51%), Gaps = 49/429 (11%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHF+GIGG+G+ +A++ QG++VSGSD+ S L E G ++IGH+ NIQ
Sbjct: 21 RIKHIHFIGIGGAGMCGIAEVLKNQGYKVSGSDIKASKTTAQLEENGIKVYIGHTAENIQ 80
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
G N +V S+AI +N EI A P+ +R L +L + IAV+G+HGK+
Sbjct: 81 G------ANVIVVSTAIDAENPEIKAAIETRTPVVRRAEMLGELMRYRHGIAVAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S++ +L D T ++G + + + G + V EADE D FL L P
Sbjct: 135 TTTSLVTCMLAEENLDPTYVIGGLLNRTGVNAAL-GASRFIVAEADESDASFLHLQPMAT 193
Query: 254 VVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
+VTN+D +H+D + D +K F +FL+++ G V+CGD R ++ +I +
Sbjct: 194 IVTNIDADHMDTYGGSFDVLKDTFVQFLQKLPFYGLAVVCGDDANIREIMPRIGR----- 248
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLA 370
+ITYGF+ ND A + Q G S + + + R
Sbjct: 249 --------------------PLITYGFNEDNDIRAVDI---EQEGMQSHFTVLRKDREPL 285
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT-- 428
++++ +PG+HN+LN+LA I G S A + L F GV RRF + G
Sbjct: 286 RLTINLPGLHNILNALAAI-------GIATDEGVSDAAIARALESFSGVGRRFQVQGEFD 338
Query: 429 IYGCHI--YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
I G ++ DD+ HHP EV A ++AAR P++ L+ +FQPH +SR DDF + LS
Sbjct: 339 IDGGNVKLVDDYGHHPKEVEATIKAARASHPDRRLVMMFQPHRFSRTRDCFDDFVDVLSH 398
Query: 487 ADQVVVSAV 495
DQ+++ V
Sbjct: 399 VDQLLLLEV 407
>gi|94264635|ref|ZP_01288418.1| UDP-N-acetylmuramate--alanine ligase [delta proteobacterium MLMS-1]
gi|93454930|gb|EAT05171.1| UDP-N-acetylmuramate--alanine ligase [delta proteobacterium MLMS-1]
Length = 463
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 158/420 (37%), Positives = 220/420 (52%), Gaps = 43/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+S +A++ L G+ VSGSDL L + G + IGH I G D
Sbjct: 8 IHFVGIGGIGMSGIAEVLLNLGYRVSGSDLRAGEITRRLADLGGLIGIGHEARRIAGAD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE-KYNLIAVSGSHGKSTTA 196
VV SSA+ DN E++ A+ GVP+ R LA+L K N IAV+GSHGK++T
Sbjct: 67 -----VVVTSSAVGADNPEVVAAQEAGVPVIPRAAMLAELMRLKVNGIAVAGSHGKTSTT 121
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM VL G D T ++G V F + G G V EADE DG F+ LSP + +VT
Sbjct: 122 SMAGVVLAEAGLDPTVVIGGQVNSFGSNAKL-GTGDFLVAEADESDGSFVRLSPVLEIVT 180
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N+D EHVD + D +AVK+ F F+ +I G ++C D +LL I++
Sbjct: 181 NIDHEHVDHYADLEAVKAAFLEFINRIPFYGAAILCLDDDNVTALLPMIRK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG-SDYILCERGRPLAQISLQ 375
++ITYG SS D A + +G S + + R + L ++SL
Sbjct: 232 ----------------RVITYGLSSQADIQAREIT--TRGFISRFEVWSRQQRLGKVSLA 273
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
+PG HNV N+LA IA R+ A + L+ + GV RR + G G +
Sbjct: 274 VPGRHNVYNALAAIAL-------GRELEIPFATIARALNNYSGVQRRLQVKGESDGITVI 326
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+ HHPTE+RA L A R +P + L+ +FQPH YSR L DF A +AD ++++ +
Sbjct: 327 DDYGHHPTEIRATLAALRAAWPRRRLVVLFQPHRYSRTAGLFQDFCTAFHDADLLILNNI 386
>gi|166033152|ref|ZP_02235981.1| hypothetical protein DORFOR_02874 [Dorea formicigenerans ATCC
27755]
gi|166027509|gb|EDR46266.1| UDP-N-acetylmuramate--L-alanine ligase [Dorea formicigenerans ATCC
27755]
Length = 515
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 151/419 (36%), Positives = 230/419 (54%), Gaps = 40/419 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG +S LA++ L++ F VSGSD S+ + L +AGA + G SNI DG
Sbjct: 68 VHFIGIGGISMSGLAEVLLEENFTVSGSDNKESALTDHLEKAGAQIFYGQKASNII--DG 125
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTTA 196
+ VV ++AI +DN E A G+P+ R L +L Y++ IAVSG+HGK+TT
Sbjct: 126 ---IDVVVYTAAIHKDNEEYQAAVQKGLPMLTRAELLGQLMTNYDIPIAVSGTHGKTTTT 182
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM++++L A D T VG + + G+I G + FV EA EY FL P ++V+
Sbjct: 183 SMISHILLAGEMDPTISVGG-ILKAIGGNIRVGNSEIFVTEACEYTNSFLSFFPKISVIL 241
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N+D +H+D F+D + +++ F RF K + G LVI GD +D++ + TG
Sbjct: 242 NIDEDHLDFFKDLEDIRNSFHRFAKLLPKDGTLVINGD-------IDRLDEITG------ 288
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
DL D K++TYG + ++A +V + G + + L + G + +ISL +
Sbjct: 289 -------DL-----DCKLVTYGTNPSATYHAANVTHDELGEASFDLVKNGEFVDRISLSV 336
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
G HNV N+LA +A +++ K L +F G RRF+ G G I D
Sbjct: 337 SGDHNVSNALAALAV-------ADLLDVNVSVAKKGLKEFHGTDRRFEYKGETNGVTIID 389
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHPTE+ A L AA +P++ + +FQPHTY+R L +F ALS D V+++ +
Sbjct: 390 DYAHHPTEIAATLTAATH-YPHREIWCIFQPHTYTRTKALFPEFVEALSHTDHVIMADI 447
>gi|398961891|ref|ZP_10678980.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM30]
gi|398151828|gb|EJM40365.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM30]
Length = 486
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 156/428 (36%), Positives = 219/428 (51%), Gaps = 47/428 (10%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG G+ +A++ L G+EVSGSDL S E L GA+++IGH N
Sbjct: 15 RIRRIHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKASPVTERLESFGAHIYIGHRAENAA 74
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
D +V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+
Sbjct: 75 TAD------VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKT 128
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S++A V A G D T ++G + + G + + EADE D FL L P VA
Sbjct: 129 TTTSLIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVA 187
Query: 254 VVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
VVTN+D +H+ ++ D + +K F FL + G V+C D R +L +K+ T
Sbjct: 188 VVTNIDADHMATYDGDFNKLKKTFVEFLHNLPFYGLAVMCLDDPVVREILPLVKRPT--- 244
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER-GRPLAQ 371
+TYGFS D A +V QG + R R
Sbjct: 245 ----------------------VTYGFSEDADVRAINV--RQQGMQTFFTVLRPDREPLD 280
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY- 430
+S+ +PG HNVLNSLA I + D+ S E+I LS F GV RRF + G +
Sbjct: 281 VSVNMPGNHNVLNSLATIC----IATDEGVSDEAIVQ---GLSGFQGVGRRFQVYGELPV 333
Query: 431 ---GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ DD+ HHPTEV AV++A R +P + L+ V+QPH YSR L DDF N L++A
Sbjct: 334 DGGNVMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVNVLADA 393
Query: 488 DQVVVSAV 495
+ +++ V
Sbjct: 394 NVLLLMEV 401
>gi|167035502|ref|YP_001670733.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas putida GB-1]
gi|189029021|sp|B0KFS5.1|MURC_PSEPG RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|166861990|gb|ABZ00398.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas putida GB-1]
Length = 482
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 156/425 (36%), Positives = 220/425 (51%), Gaps = 49/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G+EVSGSDL S E L GA + +GH N D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKASPVTERLESFGAEIFVGHRAENAATAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSAI N E+ A +P+ R LA+L + +AV+G+HGK+TT S
Sbjct: 78 -----VLVVSSAINPANPEVATALERRIPVVPRAEMLAELMRYRHGVAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+LA V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LLASVFAAGGLDPTFVIGGRLTAAGTNAQL-GTSRYLIAEADESDASFLHLQPMVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ +E D + +K F FL + G V+C D R +L Q+K+ T
Sbjct: 192 IDADHMATYEGDFNKLKKTFVEFLHNLPFYGLAVMCLDDPVVREILPQVKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDY--ILCERGRPLAQISL 374
+TYGFS D A +V QG + +L PL ++S+
Sbjct: 245 ------------------VTYGFSEEADIRAINV--RQQGMQTHFTVLRRDCEPL-EVSV 283
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY---- 430
+PG HNVLN+LA IA + D+ + E+I LS F GV RRF + G +
Sbjct: 284 NMPGNHNVLNALATIA----IATDEGITDEAIIQ---GLSGFQGVGRRFQVYGELPVEGG 336
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHPTEV AV++A R +P++ L+ V+QPH YSR L DDF L +A+ +
Sbjct: 337 SVMLVDDYGHHPTEVAAVIKAVRGGWPSRRLVIVYQPHRYSRTRDLYDDFVQVLGDANVL 396
Query: 491 VVSAV 495
++ V
Sbjct: 397 LLMEV 401
>gi|28199734|ref|NP_780048.1| UDP-N-acetylmuramate--L-alanine ligase [Xylella fastidiosa
Temecula1]
gi|182682481|ref|YP_001830641.1| UDP-N-acetylmuramate--L-alanine ligase [Xylella fastidiosa M23]
gi|386083815|ref|YP_006000097.1| UDP-N-acetylmuramate--L-alanine ligase [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|417559111|ref|ZP_12210065.1| UDP-N-acetylmuramate-alanine ligase [Xylella fastidiosa EB92.1]
gi|32129758|sp|Q87AG0.1|MURC_XYLFT RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|229620437|sp|B2I9B2.1|MURC_XYLF2 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|28057855|gb|AAO29697.1| UDP-N-acetylmuramate--alanine ligase [Xylella fastidiosa Temecula1]
gi|182632591|gb|ACB93367.1| UDP-N-acetylmuramate--alanine ligase [Xylella fastidiosa M23]
gi|307578762|gb|ADN62731.1| UDP-N-acetylmuramate--L-alanine ligase [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|338178379|gb|EGO81370.1| UDP-N-acetylmuramate-alanine ligase [Xylella fastidiosa EB92.1]
Length = 477
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 153/426 (35%), Positives = 225/426 (52%), Gaps = 50/426 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HFVGIGG+G++ +A++ L G+EVSGSD ++ L GA + GHS +N+ G D
Sbjct: 18 VHFVGIGGAGMTGIAEVMLTLGYEVSGSDNADNAATRRLATLGARVMRGHSAANVLGTD- 76
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSAI +DN E++ A+S +PI R LA+L + IAV+G+HGK+TT S
Sbjct: 77 -----CVVVSSAIREDNPELMEARSQRIPIMPRAAMLAELMRFRHGIAVAGTHGKTTTTS 131
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL G D T ++G + + G G+ V+EADE DG FL L+P VAVVTN
Sbjct: 132 LIAAVLSEGGLDPTFVIGGQL-LAAGANAKLGAGQWLVVEADESDGSFLRLNPLVAVVTN 190
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H++ + D +K F FL+++ G ++C D
Sbjct: 191 IDADHLENYGNDFSRIKDAFTEFLQRLPFYGLALLCLDDP-------------------- 230
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSD--YILCERGRPLAQISL 374
+ ++L G+ + ++TYG + D AE V VQ G+ + LC + ++L
Sbjct: 231 ----EVAELVGKARRH-VMTYGIDAAADVRAEDV---VQDGARMCFTLCLPEGKVIPVTL 282
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY---- 430
+PG HNVLN+LA A Q + L F+G+ RRF+ +G +
Sbjct: 283 ALPGRHNVLNALAASAV-------GWQLGVPPEVIGRALKSFVGIGRRFNDLGDVAIGNG 335
Query: 431 GC-HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
C + DD+ HHP E+ AV AAR +P+K L+ FQPH YSR D FA LS D
Sbjct: 336 ACVRLIDDYGHHPRELEAVFAAARGGWPDKRLVVAFQPHRYSRTRDQFDAFAAVLSSVDA 395
Query: 490 VVVSAV 495
+V+S V
Sbjct: 396 LVLSEV 401
>gi|71731941|gb|EAO33998.1| UDP-N-acetylmuramate--alanine ligase [Xylella fastidiosa subsp.
sandyi Ann-1]
Length = 477
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 153/426 (35%), Positives = 225/426 (52%), Gaps = 50/426 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HFVGIGG+G++ +A++ L G+EVSGSD ++ L GA + GHS +N+ G D
Sbjct: 18 VHFVGIGGAGMTGIAEVMLTLGYEVSGSDNADNAATRRLATLGARVMRGHSAANVLGTD- 76
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSAI +DN E++ A+S +PI R LA+L + IAV+G+HGK+TT S
Sbjct: 77 -----CVVVSSAIREDNPELMEARSQRIPIMPRAAMLAELMRFRHGIAVAGTHGKTTTTS 131
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL G D T ++G + + G G+ V+EADE DG FL L+P VAVVTN
Sbjct: 132 LIAAVLSEGGLDPTFVIGGQL-LAAGANAKLGAGQWLVVEADESDGSFLRLNPLVAVVTN 190
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H++ + D +K F FL+++ G ++C D
Sbjct: 191 IDADHLENYGNDFSRIKDAFTEFLQRLPFYGLALLCLDDP-------------------- 230
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSD--YILCERGRPLAQISL 374
+ ++L G+ + ++TYG + D AE V VQ G+ + LC + ++L
Sbjct: 231 ----EVAELVGKARRH-VMTYGIDAAADVRAEDV---VQDGARMCFTLCLPEGKVIPVTL 282
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY---- 430
+PG HNVLN+LA A Q + L F+G+ RRF+ +G +
Sbjct: 283 ALPGRHNVLNALAASAV-------GWQLGVPPEVIGRALKSFVGIGRRFNDLGDVAIGNG 335
Query: 431 GC-HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
C + DD+ HHP E+ AV AAR +P+K L+ FQPH YSR D FA LS D
Sbjct: 336 ACVRLIDDYGHHPRELEAVFAAARGGWPDKRLVVAFQPHRYSRTRDQFDAFAAVLSSVDA 395
Query: 490 VVVSAV 495
+V+S V
Sbjct: 396 LVLSEV 401
>gi|389580287|ref|ZP_10170314.1| UDP-N-acetylmuramate--alanine ligase [Desulfobacter postgatei 2ac9]
gi|389401922|gb|EIM64144.1| UDP-N-acetylmuramate--alanine ligase [Desulfobacter postgatei 2ac9]
Length = 455
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 146/416 (35%), Positives = 221/416 (53%), Gaps = 42/416 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+S +A+L L G+ +SGSDL S + L GA ++ GH+ NI
Sbjct: 8 IHFVGIGGIGMSGIAELLLNLGYTISGSDLKLSHITDRLKAKGAVIYKGHAKENITD--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
N +V SSAI N E++ AK +G PI R LA+L IAV+G+HGK++T +
Sbjct: 65 ---VNVMVTSSAISSQNPEVIRAKELGCPIIPRAEMLAELMRIKYAIAVAGAHGKTSTTA 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M++ +L G D T I+G + Q D + +G G+ V EADE DG FL +PS+A VTN
Sbjct: 122 MISQILNTAGLDPTVIIGG-LLQGLDTNALHGSGEFIVAEADESDGSFLKYAPSIAAVTN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D EH+D ++D + +K F +F+ + G ++C D+ + +L +I
Sbjct: 181 IDLEHLDFYKDIEDIKDKFVQFINSVPFYGLAILCLDNPHIQDILPRIT----------- 229
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP-LAQISLQI 376
+ ITYG ++ ++ A + + G +G+ L I L I
Sbjct: 230 --------------VRYITYGMTAQSELQARHI--RFENGKSLFNVFKGKQDLGHILLNI 273
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
G HN+LN++A IAT L L +K L + GV RR ++ G G + D
Sbjct: 274 GGQHNILNAMAGIATGLEL-------KVPFDTIKKALEEIKGVKRRLEIKGKTKGITVMD 326
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
D+ HHPTE++A L A R+ +P+K +I +FQPH Y+R L +F A ++D ++V
Sbjct: 327 DYGHHPTEIKATLTAVRESYPDKRIIVLFQPHRYTRTKALFQEFTRAFYQSDVLIV 382
>gi|22297914|ref|NP_681161.1| UDP-N-acetylmuramate--L-alanine ligase [Thermosynechococcus
elongatus BP-1]
gi|34222674|sp|Q8DLV5.1|MURC_THEEB RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|22294092|dbj|BAC07923.1| UDP-N-acetylmuramate-alanine ligase [Thermosynechococcus elongatus
BP-1]
Length = 475
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 148/434 (34%), Positives = 218/434 (50%), Gaps = 48/434 (11%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
+++F R HF+GIGG G+SALA + K+G VSGSDL + E L E G + IG
Sbjct: 1 MMEFNERP--FHFIGIGGIGMSALAYILAKKGLRVSGSDLRPNRLTEQLAELGVQIFIGQ 58
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
S +N++ + P V+ SSAI DN E L A+ +G PI+ R LA L + IAV+
Sbjct: 59 SAANLERYPFTPLPQ-VICSSAIRSDNPEYLAAQHLGCPIFHRSDVLAALMHRSQSIAVA 117
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT+SM+AY+L G D T IVG V + G+ G + V EADE DG
Sbjct: 118 GTHGKTTTSSMIAYLLLQAGLDPTIIVGGEVAAW-QGNARVGQSRYLVAEADESDGSLRK 176
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P + V+TN++ +H D + + V + F++F Q + ++ C D R L
Sbjct: 177 FHPHIGVITNIELDHPDHYNSLEEVVATFQQFADQAEI---VIACADCPNIRDRL----- 228
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGF--SSFNDWYAESVCPNVQGGSDYILCER 365
H +++TY + D+ + + +G + + ER
Sbjct: 229 ----------------------HHPRLLTYSLQRQAAVDYCVDHIQYTAEGTTARVW-ER 265
Query: 366 GRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
G L + L + G HN+ N+LAVIA L D A + L +F G RRF+
Sbjct: 266 GTSLGILQLNVLGAHNLQNALAVIAVGRYLGID-------FATIAAALLEFRGARRRFEE 318
Query: 426 IGTIYGCHIYDDFAHHPTEVRAVLQAAR----QRFPNKALIAVFQPHTYSRLVVLKDDFA 481
G + G DD+AHHP+E+ A L+AAR + P + ++AVFQPH YSR L F
Sbjct: 319 RGQVNGIRFIDDYAHHPSEIMATLEAARLQVGTQTPWQRIVAVFQPHRYSRTQTLLKAFG 378
Query: 482 NALSEADQVVVSAV 495
+ AD V+ + +
Sbjct: 379 QCFTAADHVIFTDI 392
>gi|415717799|ref|ZP_11467034.1| UDP-N-acetylmuramate--alanine ligase [Gardnerella vaginalis 1500E]
gi|388060682|gb|EIK83366.1| UDP-N-acetylmuramate--alanine ligase [Gardnerella vaginalis 1500E]
Length = 525
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 154/448 (34%), Positives = 238/448 (53%), Gaps = 41/448 (9%)
Query: 70 DFKNRK--GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
D KN G +HF+GIGG+G+S LA++ ++G VSG D + + + L E G ++ IG
Sbjct: 26 DSKNASTLGRVHFIGIGGAGMSVLAEMLHEEGVSVSGCDREENDHTKRLEELGISVEIGQ 85
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
+ S+++ D +V SSAI +N EI+ A + GV + R LA L + V+
Sbjct: 86 NASHVESAD------VLVYSSAIKPNNPEIVAAYANGVKLVHRSDILALLLASKTGVTVA 139
Query: 188 GSHGKSTTASMLAYVLKAMG----DDLTAIVGAHVPQFPDGSIFYGG----GKNFVLEAD 239
G+HGK+TT+S+L+++L G D + +G + Q DG++ GG G V EAD
Sbjct: 140 GAHGKTTTSSLLSHILSVAGTGELSDPSYAIGGSI-QAADGTVIDGGHAGKGSVMVAEAD 198
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCAR 299
E DG F PS+A+VTN + +H+D + + + F + H++IC D + AR
Sbjct: 199 ESDGSFEKYRPSIAIVTNAEADHLDHYGSSERYREAFVEHVSHAI--DHVIICADDEGAR 256
Query: 300 SLLDQIKQDT-------GLKYSGGVVSNQSSDLW---GQGHDYKIITYGFSSFNDWYAES 349
+L+++ +T G S S + +L G H+ + G F +
Sbjct: 257 KVLEKMSDETLRATIAYGAYDSWASTSARVQNLAQFAGIKHESEQAVSGREVFTLVLPGN 316
Query: 350 VCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLN-SLAVIATVLTLIGDKRQSHESIAC 408
+ N+ G + I E L ++SL IPG+HN N S A+IA VL +G K + A
Sbjct: 317 IAGNIAGNAGKI--EDSVSL-EVSLLIPGLHNARNASAAIIAAVL--LGMKPEDAARGA- 370
Query: 409 LKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPH 468
F G SRRFD+ G + G + DD+AHHPTE+ A+L+AAR+R+ + L +FQPH
Sbjct: 371 -----QSFRGASRRFDIRGCVNGVTVVDDYAHHPTEIEALLRAARRRYTSAKLRVLFQPH 425
Query: 469 TYSRLVVLKDDFANALSEADQVVVSAVL 496
+SR +FANAL+ AD V+V+ +
Sbjct: 426 LFSRTRAFASEFANALALADDVIVTGIF 453
>gi|365873708|ref|ZP_09413241.1| UDP-N-acetylmuramate--alanine ligase [Thermanaerovibrio velox DSM
12556]
gi|363983795|gb|EHM10002.1| UDP-N-acetylmuramate--alanine ligase [Thermanaerovibrio velox DSM
12556]
Length = 484
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 145/416 (34%), Positives = 218/416 (52%), Gaps = 34/416 (8%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH +GIGG+G+S LA L G +VSG D +SY + L++ G + +GH ++I G
Sbjct: 15 IHLMGIGGAGMSGLALLLKGMGCQVSGCDAAKTSYSKKLVQGGMEVLMGHDEAHI----G 70
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
P+ +V +SAI + EI+ A+ +GV + KR L+ + V+G+HGK+TT+S
Sbjct: 71 RFMPDLLVYTSAIEDSHPEIVEARRLGVTVAKRAEVLSAIFNSKRGFGVAGTHGKTTTSS 130
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
MLA + + G T +G + + G G V E DE DG F P VAVVTN
Sbjct: 131 MLALIAERHGISPTVAIGGELCDIGCNAKL-GTGDVMVAELDESDGSFELFEPEVAVVTN 189
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK-QDTGLKYSGG 316
+DW+HVD + V F RF+ ++ GG LVIC D + LL +I+ +D +
Sbjct: 190 VDWDHVDHYGSVHDVLDAFLRFVGGMKDGGALVICADDGGNQELLRRIEFRDKCI----- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+++ YG+ + DW A +VC GG + G+ ++ L++
Sbjct: 245 ----------------RVLKYGWGTSWDWGAANVCHIDGGGVAADVYRDGKFCGELRLRV 288
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
G HNVLN+L A ++G ++ SI S F G RRF +G+ G ++D
Sbjct: 289 SGEHNVLNALGACAAA-EMMGVPFKASSSIL------SSFSGAKRRFQRVGSSGGVDVFD 341
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
D+ HHP E++A + AAR FP + LI VFQPH Y+R + DFA L+ AD+ +V
Sbjct: 342 DYGHHPREIQATINAARGAFPGRRLIVVFQPHRYTRTSAMYGDFARVLALADKALV 397
>gi|387892155|ref|YP_006322452.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas fluorescens
A506]
gi|423690030|ref|ZP_17664550.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas fluorescens
SS101]
gi|387159784|gb|AFJ54983.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas fluorescens A506]
gi|387997992|gb|EIK59321.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas fluorescens
SS101]
Length = 482
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 155/428 (36%), Positives = 219/428 (51%), Gaps = 47/428 (10%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG G+ +A++ L G++VSGSDL S E L GA + IGH N
Sbjct: 15 RIRRIHFVGIGGVGMCGIAEVLLNLGYQVSGSDLKESPVTERLKSFGAQIFIGHRAENAA 74
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
D +V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+
Sbjct: 75 EAD------VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKT 128
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S++A V A G D T ++G + + G + + EADE D FL L P VA
Sbjct: 129 TTTSLIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVA 187
Query: 254 VVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
VVTN+D +H+ ++ D + +K F FL + G V+C D R +L Q+K+ T
Sbjct: 188 VVTNIDEDHMATYDGDFNKLKKTFVDFLHNLPFYGLAVVCLDDPVVREILPQVKRPT--- 244
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER-GRPLAQ 371
+TYGFS D A +V +G + R R
Sbjct: 245 ----------------------VTYGFSEDADVRAINV--RQEGMQTFFTVLRPDREPLD 280
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY- 430
+S+ +PG HNVLNSLA I + D+ S E+I LS+F GV RRF + G +
Sbjct: 281 VSVNMPGNHNVLNSLATIC----IATDEGVSDEAIVE---GLSRFAGVGRRFQVYGQLPV 333
Query: 431 ---GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ DD+ HHPTEV AV++A R +P + L+ V+QPH YSR L DDF N L++A
Sbjct: 334 EGGDVMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVNVLADA 393
Query: 488 DQVVVSAV 495
+ +++ V
Sbjct: 394 NVLLLMEV 401
>gi|416996782|ref|ZP_11939190.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia sp. TJI49]
gi|325518027|gb|EGC97835.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia sp. TJI49]
Length = 465
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 154/427 (36%), Positives = 226/427 (52%), Gaps = 52/427 (12%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ + G+EVSGSDL ++ + L GA + IGH +NI+G
Sbjct: 8 IHFVGIGGAGMSGIAEVLVNLGYEVSGSDLSRNAVTDRLQALGARIAIGHDAANIEG--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
NAVV S+A+ DN E+L A++ VPI +R LA+L IA++G+HGK+TT S
Sbjct: 65 ---ANAVVVSTAVRSDNPEVLAARAKRVPIVQRAVMLAELMRLKQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL A G D T ++G + + G G V EADE D FL L P + V+TN
Sbjct: 122 LVASVLAAGGLDPTFVIGGRLIS-AGANARLGTGDFIVAEADESDASFLNLYPVIEVITN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D +K F F +++ G V+C D R ++ I +
Sbjct: 181 IDADHMDTYGHDFARLKQAFIEFTQRLPFYGSAVVCVDDPNVRQIIPFISK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDY--ILCERGRPLAQISL 374
++ YG S AE+V + + G + ++ ER PLA + L
Sbjct: 232 ----------------PVVRYGLSPDAQVRAENV--DARDGRMHFTVIRERRAPLA-VVL 272
Query: 375 QIPGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY--- 430
+PG+HNV N+LA IA L + D ++ L++F GV RRF G +
Sbjct: 273 NLPGLHNVQNALAAIAIATDLGVSDD--------AIQQALAEFNGVGRRFQRYGEVPSAD 324
Query: 431 GCH--IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
G H + DD+ HHP E+ A + AAR FP + L+ FQPH Y+R DDF N LS D
Sbjct: 325 GGHYTLIDDYGHHPVEMAATIAAARGAFPGRRLVLAFQPHRYTRTRDCFDDFVNVLSTVD 384
Query: 489 QVVVSAV 495
+V++ V
Sbjct: 385 ALVLTEV 391
>gi|302185268|ref|ZP_07261941.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
syringae 642]
gi|424069273|ref|ZP_17806720.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|440722114|ref|ZP_20902497.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae
BRIP34876]
gi|440725823|ref|ZP_20906085.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae
BRIP34881]
gi|443642441|ref|ZP_21126291.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas syringae pv.
syringae B64]
gi|407994996|gb|EKG35545.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|440361643|gb|ELP98860.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae
BRIP34876]
gi|440367966|gb|ELQ05012.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae
BRIP34881]
gi|443282458|gb|ELS41463.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas syringae pv.
syringae B64]
Length = 486
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 155/425 (36%), Positives = 219/425 (51%), Gaps = 49/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G+EVSGSDL S+ E L GA + IGH N G D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKGSAVTERLESFGAQIFIGHRAENTIGAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 78 -----VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ +E D + +K F FL + G V+C D R +L +K+ T
Sbjct: 192 IDADHMATYEGDFNKLKKTFVEFLHNLPFYGLAVMCIDDPVVREILPLVKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLAQISL 374
+TYGFS D A +V Q G + + + R R +S+
Sbjct: 245 ------------------LTYGFSESADIRAINVR---QDGMLTFFTVLRRDREPLDVSV 283
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY---- 430
+PG HNVLNSLA IA + D+ S E+I LS F GV RRF + G +
Sbjct: 284 NMPGNHNVLNSLATIA----IATDEGVSDEAIVQ---GLSGFQGVGRRFQVYGELPVDGG 336
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP EV AV+ A R +P++ L+ V+QPH +SR L DDF L++A+ +
Sbjct: 337 NVMLVDDYGHHPREVAAVINAVRGGWPDRRLVMVYQPHRFSRTRDLYDDFVQVLADANVL 396
Query: 491 VVSAV 495
++ V
Sbjct: 397 LLMEV 401
>gi|440742324|ref|ZP_20921650.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae
BRIP39023]
gi|440377647|gb|ELQ14292.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae
BRIP39023]
Length = 486
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 155/425 (36%), Positives = 219/425 (51%), Gaps = 49/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G+EVSGSDL S+ E L GA + IGH N G D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKGSAVTERLESFGAQIFIGHRAENTIGAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 78 -----VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ +E D + +K F FL + G V+C D R +L +K+ T
Sbjct: 192 IDADHMATYEGDFNKLKKTFVEFLHNLPFYGLAVMCIDDPVVREILPLVKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLAQISL 374
+TYGFS D A +V Q G + + + R R +S+
Sbjct: 245 ------------------LTYGFSESADIRAINVR---QDGMLTFFTVLRRDREPLDVSV 283
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY---- 430
+PG HNVLNSLA IA + D+ S E+I LS F GV RRF + G +
Sbjct: 284 NMPGNHNVLNSLATIA----IATDEGVSDEAIVQ---GLSGFQGVGRRFQVYGELPVDGG 336
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP EV AV+ A R +P++ L+ V+QPH +SR L DDF L++A+ +
Sbjct: 337 NVMLVDDYGHHPREVAAVINAVRGGWPDRRLVMVYQPHRFSRTRDLYDDFVQVLADANVL 396
Query: 491 VVSAV 495
++ V
Sbjct: 397 LLMEV 401
>gi|398859368|ref|ZP_10615045.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM79]
gi|398237063|gb|EJN22826.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM79]
Length = 486
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 153/423 (36%), Positives = 217/423 (51%), Gaps = 45/423 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G+EVSGSDL S E L GA+++IGH N D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKASPVTERLESFGAHIYIGHRAENAANAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 78 -----VLVTSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ ++ D + +K F FL + G V+C D R +L Q+K+ T
Sbjct: 192 IDADHMATYDGDFNKLKKTFVEFLHNLPFYGLAVVCLDDPVVREILPQVKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+TYGF D A +V +L PL +S+ +
Sbjct: 245 ------------------VTYGFGDDADVRAINVRQKGMQTFFTVLRPDREPL-DVSVNM 285
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----GC 432
PG HNVLN+LA I + D+ S E+I LS F GV RRF + G +
Sbjct: 286 PGNHNVLNALATIC----IATDEGVSDEAIVQ---GLSGFQGVGRRFQVYGELPVDGGNV 338
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+ DD+ HHPTEV AV++A R +P + L+ V+QPH YSR L DDF N L++A+ +++
Sbjct: 339 MLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVNVLADANVLLL 398
Query: 493 SAV 495
V
Sbjct: 399 MEV 401
>gi|383314571|ref|YP_005375426.1| UDP-N-acetyl muramate--L-alanine ligase [Corynebacterium
pseudotuberculosis P54B96]
gi|384507084|ref|YP_005683753.1| UDP-N-acetyl muramate--L-alanine ligase [Corynebacterium
pseudotuberculosis C231]
gi|384509171|ref|YP_005685839.1| UDP-N-acetyl muramate--L-alanine ligase [Corynebacterium
pseudotuberculosis I19]
gi|384511261|ref|YP_005690839.1| UDP-N-acetyl muramate--L-alanine ligase [Corynebacterium
pseudotuberculosis PAT10]
gi|387136911|ref|YP_005692891.1| UDP-N-acetyl muramate--L-alanine ligase [Corynebacterium
pseudotuberculosis 42/02-A]
gi|302206518|gb|ADL10860.1| UDP-N-acetyl muramate--L-alanine ligase [Corynebacterium
pseudotuberculosis C231]
gi|308276760|gb|ADO26659.1| UDP-N-acetyl muramate--L-alanine ligase [Corynebacterium
pseudotuberculosis I19]
gi|341825200|gb|AEK92721.1| UDP-N-acetyl muramate--L-alanine ligase [Corynebacterium
pseudotuberculosis PAT10]
gi|348607356|gb|AEP70629.1| UDP-N-acetyl muramate--L-alanine ligase [Corynebacterium
pseudotuberculosis 42/02-A]
gi|380870072|gb|AFF22546.1| UDP-N-acetyl muramate--L-alanine ligase [Corynebacterium
pseudotuberculosis P54B96]
Length = 485
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 143/439 (32%), Positives = 224/439 (51%), Gaps = 64/439 (14%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H +GIGG+G+S +A++ L +G VSGSD+ S + L GA++ +GH+ N+ +
Sbjct: 13 VHLIGIGGAGMSGVARILLSRGATVSGSDVKDSRAVLALRSMGAHVAVGHAAENL--SIA 70
Query: 138 SRFPNAVVAS-SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
P VV S +AIPQDN E++ A+ +G+P+ +R L +L E + ++G+HGK++T
Sbjct: 71 GEKPTVVVTSFAAIPQDNPELVAARELGIPVIRRSDLLGELMEGSTQVLIAGTHGKTSTT 130
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM ++A G D + +G + + + G G FV EADE D L P++AV+T
Sbjct: 131 SMAVVAMQAAGMDPSFAIGGQLNKAGTNA-HQGTGDAFVAEADESDASLLRYKPNIAVIT 189
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F+ E+A +F +F ++ G LV+C D L +I +
Sbjct: 190 NIEPDHLDFFKSEEAYFEVFEKFADRLVPGVSLVVCLDDPHTAMLGQKIHE--------- 240
Query: 317 VVSNQSSDLWGQGHDYKIITYG---------------FSSFNDWYAESVCPNVQGGSDYI 361
+ D K++ YG SF ++ +V V GG +
Sbjct: 241 -----------KHKDIKVVGYGTVAASAEYPDIAKTVVESFEITHSGTVATIVVGGQE-- 287
Query: 362 LCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSR 421
++ L+ PG H VLN+ A + + GD + L +S F GV R
Sbjct: 288 --------TEVVLRTPGRHMVLNAAAALTAGVIAGGD-------LFKLAAGISDFSGVRR 332
Query: 422 RFDLIGTI-----YGCHIYDDFAHHPTEVRAVLQAARQRFPNKA---LIAVFQPHTYSRL 473
RF+ G + G +YDD+AHHPTEV AVL AAR + + L+ +FQPH YSR
Sbjct: 333 RFEYHGVVAEGDFAGIELYDDYAHHPTEVSAVLTAARAKLQARGQGRLLVIFQPHLYSRT 392
Query: 474 VVLKDDFANALSEADQVVV 492
+ D+FA ALS AD+ +V
Sbjct: 393 INFVDEFAAALSLADEAIV 411
>gi|363896779|ref|ZP_09323328.1| UDP-N-acetylmuramate-alanine ligase [Oribacterium sp. ACB7]
gi|361960344|gb|EHL13593.1| UDP-N-acetylmuramate-alanine ligase [Oribacterium sp. ACB7]
Length = 470
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 142/424 (33%), Positives = 219/424 (51%), Gaps = 40/424 (9%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
+R W+HF+GIGG +S LA++ +GF VSGSD+ S E L G + + S N+
Sbjct: 7 DRPIWVHFIGIGGISMSGLAEILHDRGFTVSGSDMKASPLTEHLKSLGIQVSVPQSPDNV 66
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHG 191
+ + ++AI + N E+ K G+P R L ++ + Y I VSG+HG
Sbjct: 67 KSG-----IELCIYTAAIAESNPELQEVKRQGIPTMSRAELLGRIMKNYKEAINVSGTHG 121
Query: 192 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPS 251
K+TT SM+ +L D T VG + G++ G F+ EA EY FL P+
Sbjct: 122 KTTTTSMIGEILLEAQMDPTITVGGMMKDI-GGNLRVGKSDVFLAEACEYTNSFLSFFPT 180
Query: 252 VAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
+ VV N++ +H+D F+D + ++ FR+F++++ G LV D + L+
Sbjct: 181 IEVVLNVEADHLDFFKDINEIRQSFRKFIEKLPENGILVFNKDIPHSEYFLE-------- 232
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQ 371
+L G+ KIIT+G S+ D+ A + + Y L ERG Q
Sbjct: 233 ------------NLPGR----KIITFGHSN-ADYTANFISYDHFAHPTYTLFERGEDRGQ 275
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG 431
++L + G HN+ NSL+ IA R + +K L+ F G RRF GT+ G
Sbjct: 276 VTLGVTGEHNIYNSLSAIAVA-------RAIGIPLETIKDALASFGGTDRRFQRKGTLNG 328
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
I DD+AHHP E+ A + A+ ++ +K L VFQPHTYSR + L DDFA ALS+AD+++
Sbjct: 329 FTIIDDYAHHPQEIAATIATAK-KYVHKRLWVVFQPHTYSRTLALMDDFAGALSQADEII 387
Query: 492 VSAV 495
++ +
Sbjct: 388 LADI 391
>gi|301384719|ref|ZP_07233137.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
tomato Max13]
Length = 486
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 157/430 (36%), Positives = 222/430 (51%), Gaps = 49/430 (11%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
R IHFVGIGG G+ +A++ L G+EVSGSDL S+ E L GA + +GH N
Sbjct: 14 RRIRRIHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKGSAVTERLESFGAQIFVGHRAENT 73
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
G D +V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK
Sbjct: 74 VGAD------VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGK 127
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+TT S++A V A G D T ++G + + G + + EADE D FL L P V
Sbjct: 128 TTTTSLIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLV 186
Query: 253 AVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
AVVTN+D +H+ + D + +K F FL + G V+C D R +L +K+ T
Sbjct: 187 AVVTNIDADHMVTYGGDFNKLKKTFVEFLHNLPFYGLAVMCIDDPVVRDILPLVKRPT-- 244
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPL 369
+TYGFS +D A +V Q G + + + R R
Sbjct: 245 -----------------------MTYGFSEDSDVRAINVR---QDGMLTFFTVLRRDREP 278
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG-- 427
+S+ +PG HNVLNSLA IA + D+ S E+I LS F GV RRF + G
Sbjct: 279 LDVSVNMPGNHNVLNSLATIA----IATDEGVSDEAIVQ---GLSGFQGVGRRFQVYGEL 331
Query: 428 TIYGCHIY--DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
+ G H+ DD+ HHP EV AV+ A R +P++ L+ V+QPH +SR L DDF L+
Sbjct: 332 PVEGGHVMLVDDYGHHPREVAAVISAVRGGWPDRRLVMVYQPHRFSRTRDLYDDFVQVLA 391
Query: 486 EADQVVVSAV 495
EA+ +++ V
Sbjct: 392 EANVLLLMEV 401
>gi|346310708|ref|ZP_08852722.1| UDP-N-acetylmuramate-alanine ligase [Collinsella tanakaei YIT
12063]
gi|345897342|gb|EGX67265.1| UDP-N-acetylmuramate-alanine ligase [Collinsella tanakaei YIT
12063]
Length = 476
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 148/419 (35%), Positives = 233/419 (55%), Gaps = 47/419 (11%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
HF+GIGG+G+S +A + ++G+ VSGSDL S Y+ L AG ++HIGH I
Sbjct: 19 HFIGIGGAGMSGIALVLHERGYAVSGSDLKTSRYIRQLTRAGVDIHIGHEAKTID----E 74
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
P VV S+AIP+ N E++ A+ +G+P++ R L+ L + Y +AV+G+HGK+TT+SM
Sbjct: 75 VKPEVVVVSTAIPETNPELVRARELGIPVWPRAKMLSALGQGYTTVAVAGTHGKTTTSSM 134
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
A +L M D + ++G V + D + G G+ FV EADE D FL L+P+V VVTN+
Sbjct: 135 CATMLDRMDLDPSFLIGGIVEGY-DTNGRNGSGEFFVAEADESDSSFLYLNPNVVVVTNV 193
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVV 318
+ +H+D + + ++ F F+ + G ++ CGD + L ++ + TG
Sbjct: 194 EADHMDHYSSLEEIEETFCTFMNLVGEDGCVIACGDQK----RLAELARSTG-------- 241
Query: 319 SNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG----GSDYILCERGRPLAQISL 374
++ITYG + ND VC + G+ + + ++S+
Sbjct: 242 -------------RRVITYGVDADNDV----VCIPGESMHAIGATFTVKLPDGTTHEVSI 284
Query: 375 Q-IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH 433
+ PG HN+LN+ A + TV ++G + LS F GV RRF +G + G
Sbjct: 285 KHNPGHHNMLNATASL-TVSYVLG------LDVDAAARALSSFEGVRRRFTHVGDVNGVT 337
Query: 434 IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+ DD+ HHPTE++A L AA++ K + VFQPH YSRL L+DDFANA ++AD++++
Sbjct: 338 LVDDYGHHPTEIKATLAAAKE-LAFKHVSVVFQPHRYSRLQALRDDFANAFADADKLIL 395
>gi|148980589|ref|ZP_01816136.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrionales bacterium
SWAT-3]
gi|145961172|gb|EDK26488.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrionales bacterium
SWAT-3]
Length = 486
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 147/439 (33%), Positives = 222/439 (50%), Gaps = 61/439 (13%)
Query: 67 CIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG 126
+V R IHF+GIGG+G+S +A++ L +G++++GSD+ + E L+ GA ++IG
Sbjct: 14 AMVPEMRRVKSIHFIGIGGAGMSGIAEVLLNEGYQITGSDIAQNPVTERLVSKGATVYIG 73
Query: 127 HSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAV 186
H SN + VV S+AI ++N EI+ A+ PI +R LA+L + IAV
Sbjct: 74 HQASN------VADASVVVVSTAINEENPEIIAAREARTPIVRRAEMLAELMRFRHGIAV 127
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEA 238
+G+HGK+TT +++ + G D P F +G + G N + EA
Sbjct: 128 AGTHGKTTTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGSSRILIAEA 178
Query: 239 DEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQC 297
DE D FL L P V++VTN++ +H+D + D + +K F FL + G V+C D
Sbjct: 179 DESDASFLHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAVMCVDDPV 238
Query: 298 ARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG 357
R L+ Q+ + ++ITYGFS D E+ Q G
Sbjct: 239 VRELIPQVSR-------------------------QVITYGFSEDADIRIENYVQEGQQG 273
Query: 358 SDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFM 417
+ + G+ I+L IPG HN LN+ A IA + S E+I LK ++
Sbjct: 274 K-FTVVREGKANLDITLNIPGRHNALNASAAIAVAT----EDDISDEAI--LK-AMAGTE 325
Query: 418 GVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRL 473
G RRFD +G + + DD+ HHPTEV +QAAR + +K L+ +FQPH YSR
Sbjct: 326 GTGRRFDHLGEYETGNGVAMLVDDYGHHPTEVDVTIQAARSGWADKRLVMIFQPHRYSRT 385
Query: 474 VVLKDDFANALSEADQVVV 492
L DDFAN L + D +++
Sbjct: 386 RDLYDDFANVLEQVDVLIL 404
>gi|424073654|ref|ZP_17811069.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
gi|407995757|gb|EKG36272.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
Length = 486
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 155/425 (36%), Positives = 219/425 (51%), Gaps = 49/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G+EVSGSDL S+ E L GA + IGH N G D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKGSAVTERLESFGAQIFIGHRAENTIGAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 78 -----VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ +E D + +K F FL + G V+C D R +L +K+ T
Sbjct: 192 IDADHMATYEGDFNKLKKTFVEFLHNLPFYGLAVMCIDDPVVREILPLVKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLAQISL 374
+TYGFS D A +V Q G + + + R R +S+
Sbjct: 245 ------------------LTYGFSESADIRAINVR---QDGMLTFFTVLRRDREPLDVSV 283
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY---- 430
+PG HNVLNSLA IA + D+ S E+I LS F GV RRF + G +
Sbjct: 284 NMPGNHNVLNSLATIA----IATDEGVSDEAIVQ---GLSGFQGVGRRFQVYGELPVDGG 336
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP EV AV+ A R +P++ L+ V+QPH +SR L DDF L++A+ +
Sbjct: 337 NVMLVDDYGHHPREVAAVISAVRGGWPDRRLVMVYQPHRFSRTRDLYDDFVQVLADANVL 396
Query: 491 VVSAV 495
++ V
Sbjct: 397 LLMEV 401
>gi|343509770|ref|ZP_08747032.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio scophthalmi LMG
19158]
gi|343517239|ref|ZP_08754248.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio sp. N418]
gi|342794161|gb|EGU29943.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio sp. N418]
gi|342803567|gb|EGU38917.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio scophthalmi LMG
19158]
Length = 486
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 147/440 (33%), Positives = 219/440 (49%), Gaps = 63/440 (14%)
Query: 67 CIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG 126
+V R IHF+GIGG+G+S +A++ L +G++++GSD+ + E L + GA ++IG
Sbjct: 14 AMVPEMRRVKSIHFIGIGGAGMSGIAEVLLNEGYQITGSDIAENPVTERLTQKGATVYIG 73
Query: 127 HSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAV 186
H N + VV S+AI ++N EI A+ +P+ +R LA+L + IAV
Sbjct: 74 HQAEN------VAHASVVVVSTAINEENPEIKAAREARIPVVRRAEMLAELMRFRHGIAV 127
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEA 238
+G+HGK+TT +++ + G D P F +G + G N + EA
Sbjct: 128 AGTHGKTTTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGSSRILIAEA 178
Query: 239 DEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQC 297
DE D FL L P V++VTN++ +H+D + D + +K F FL + G ++C D
Sbjct: 179 DESDASFLHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAIVCIDDPV 238
Query: 298 ARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG 357
R L+ +I + ++ITYGFS D E+ N Q G
Sbjct: 239 VRELIPRISR-------------------------QVITYGFSEDADVRIENYRQNGQQG 273
Query: 358 SDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKF 416
+ + +GR I+L IPG HN LN+ A IA IGD+ A L L
Sbjct: 274 Q-FTVVRQGRANLDITLNIPGRHNALNASAAIAVATEDDIGDE-------AILNAMLGT- 324
Query: 417 MGVSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSR 472
G RRFD +G + DD+ HHPTEV +QAAR + K L+ +FQPH YSR
Sbjct: 325 QGTGRRFDHLGEFETGNGSAMLVDDYGHHPTEVDVTIQAARSGWEEKRLVMIFQPHRYSR 384
Query: 473 LVVLKDDFANALSEADQVVV 492
L DDFAN L + D +++
Sbjct: 385 TRDLYDDFANVLEQVDVLIM 404
>gi|410666050|ref|YP_006918421.1| UDP-N-acetylmuramate--L-alanine ligase [Simiduia agarivorans SA1 =
DSM 21679]
gi|409028407|gb|AFV00692.1| UDP-N-acetylmuramate--L-alanine ligase [Simiduia agarivorans SA1 =
DSM 21679]
Length = 473
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 145/421 (34%), Positives = 218/421 (51%), Gaps = 46/421 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG+G+S +A++ L G++++GSD+ S L GA + IGH + G D
Sbjct: 18 IHFIGIGGAGMSGIAEVLLNLGYQITGSDMRASQTTRHLESKGATVFIGHRSEQVDGAD- 76
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV S+A+ N E++ A+ +PI +R L +L + IA++G+HGK+TT S
Sbjct: 77 -----VVVNSTAVKATNPELVAAREHRIPIVRRAEMLGELMRYRHGIAIAGTHGKTTTTS 131
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL A G D T ++G + + G + V EADE D FL L P V+VVTN
Sbjct: 132 LMASVLAADGKDPTFVIGGLLNSAGSNAKL-GESRYLVAEADESDASFLHLQPMVSVVTN 190
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D +K F FL + G V+CGD + LL QI +
Sbjct: 191 IDADHMDTYGGDFSVLKKTFLDFLHNLPFYGLAVVCGDDEVVCELLPQINR--------- 241
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+ITYGF D A ++ + S ++ PL +++ +
Sbjct: 242 ----------------PVITYGFGDHCDVRATNIRQDKMSTSFDVIRPGAEPLP-VTVNM 284
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL-----IGTIYG 431
PG HNVLN+LAVIA D+ + E+I + L+ F GV RRF + +G
Sbjct: 285 PGEHNVLNALAVIAVAT----DEGVADEAI---QQGLAGFQGVGRRFQVHSEMPVGESGS 337
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+ HHP EV A ++A R +P + L+ V+QPH YSR L +DF + LS D +V
Sbjct: 338 AMLVDDYGHHPREVAATIKAVRSGWPYRRLVMVYQPHRYSRTRDLFEDFVDVLSGVDALV 397
Query: 492 V 492
+
Sbjct: 398 L 398
>gi|388471599|ref|ZP_10145808.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas synxantha
BG33R]
gi|388008296|gb|EIK69562.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas synxantha
BG33R]
Length = 482
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 155/428 (36%), Positives = 219/428 (51%), Gaps = 47/428 (10%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG G+ +A++ L G++VSGSDL S E L GA + IGH N
Sbjct: 15 RIRRIHFVGIGGVGMCGIAEVLLNLGYQVSGSDLKESPVTERLKSFGAQIFIGHRAENAA 74
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
D +V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+
Sbjct: 75 EAD------VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKT 128
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S++A V A G D T ++G + + G + + EADE D FL L P VA
Sbjct: 129 TTTSLIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVA 187
Query: 254 VVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
VVTN+D +H+ ++ D + +K F FL + G V+C D R +L Q+K+ T
Sbjct: 188 VVTNIDEDHMATYDGDFNKLKKTFVDFLHNLPFYGLAVVCLDDPVVREILPQVKRPT--- 244
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER-GRPLAQ 371
+TYGFS D A +V +G + R R
Sbjct: 245 ----------------------VTYGFSEDADVRAINV--RQEGMQTFFTVLRPDREPLD 280
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY- 430
+S+ +PG HNVLNSLA I + D+ S E+I LS+F GV RRF + G +
Sbjct: 281 VSVNMPGNHNVLNSLATIC----IATDEGVSDEAIVE---GLSRFAGVGRRFQVYGQLPV 333
Query: 431 ---GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ DD+ HHPTEV AV++A R +P + L+ V+QPH YSR L DDF N L++A
Sbjct: 334 EGGDVMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVNVLADA 393
Query: 488 DQVVVSAV 495
+ +++ V
Sbjct: 394 NVLLLMEV 401
>gi|334140302|ref|YP_004533504.1| UDP-N-acetylmuramate--L-alanine ligase [Novosphingobium sp. PP1Y]
gi|333938328|emb|CCA91686.1| UDP-N-acetylmuramate--alanine ligase [Novosphingobium sp. PP1Y]
Length = 469
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 151/424 (35%), Positives = 226/424 (53%), Gaps = 43/424 (10%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G+ V GSD+ ++GL + G + IGH+ N+ G
Sbjct: 9 GTIHFVGIGGIGMSGIAEVMHNLGYSVQGSDIAEGYVIDGLRKRGIKVMIGHAGENVAG- 67
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
VV S+A+ +DN E+++A +P+ +R LA+L N +AV+G+HGK+TT
Sbjct: 68 -----AAVVVTSTAVKRDNPEVVYALEHRIPVVRRAEMLAELMRLKNTVAVAGTHGKTTT 122
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L A G D T I G + + + G V+EADE DG FL L ++AVV
Sbjct: 123 TSMVAALLDAGGIDPTVINGGIINSYGSNARL-GASDWMVVEADESDGSFLRLDGTLAVV 181
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D + + VK F F++ + G ++C D + ++ +++
Sbjct: 182 TNIDPEHLDHYGSFERVKEAFVEFIENVPFYGAALLCIDHPEVQGVISKVR--------- 232
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS-DYILCERG---RPLAQ 371
D +++TYGFS+ D E+V P G D L +R R +
Sbjct: 233 ---------------DRRVVTYGFSAQADIRGENVTPFPGGNRFDVALRQRDGSFRRIEG 277
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG 431
I L +PG HNV N+LA + + + S C+K +KF GV RRF +G + G
Sbjct: 278 IELPMPGRHNVQNALAAVGVAVEM-------GCSDECIKGGFAKFGGVKRRFTKVGEVDG 330
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
I DD+ HHP E+RAVL AAR+ + +IAV QPH ++RL D+F A ++AD V
Sbjct: 331 VAIIDDYGHHPVEIRAVLAAAREGVKGR-VIAVVQPHRFTRLRDHMDEFQTAFNDADVVY 389
Query: 492 VSAV 495
S V
Sbjct: 390 ASPV 393
>gi|410726046|ref|ZP_11364306.1| UDP-N-acetylmuramate--alanine ligase [Clostridium sp. Maddingley
MBC34-26]
gi|410601478|gb|EKQ55989.1| UDP-N-acetylmuramate--alanine ligase [Clostridium sp. Maddingley
MBC34-26]
Length = 461
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 144/429 (33%), Positives = 230/429 (53%), Gaps = 44/429 (10%)
Query: 70 DF-KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
DF K++ IHF+GIGG +S LA + L G++VSGSD S ++ L +GA ++IGH
Sbjct: 4 DFIKDKDKKIHFIGIGGISMSGLAAVLLNSGYKVSGSDFKDSPIVDKLRVSGAEIYIGHK 63
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAV 186
NI+ D VV ++AIP DN+E+L AK + + R +L ++ + KYN +A+
Sbjct: 64 RENIKDVD------LVVYTAAIPSDNLELLEAKEKNISLMDRAEFLGQIMKGHKYN-VAI 116
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
SG+HGK+T SML+++ A D T +VG + G+ G F+ EA EY FL
Sbjct: 117 SGTHGKTTCTSMLSHITLAGNLDPTILVGGELDAIG-GNFRIGNSDYFLTEACEYKRSFL 175
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 306
P V ++ N+D +H+D ++ D + F +F K I G+L+ D + +L +
Sbjct: 176 KFYPYVGIILNIDADHLDYYKSIDEIADTFLQFSKLIPDDGYLIGFNDDARVKEILSKAH 235
Query: 307 QDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERG 366
+T ++YGF+ D A+++ N G + + + +
Sbjct: 236 CNT-------------------------LSYGFNDNADVNAKNITFNKNGCATFDVYKDN 270
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
+ L ++L +PG HN+LN+LA I ++LI D S++ I LSK G +RF+
Sbjct: 271 KNLFTLTLNVPGKHNILNALASIC--VSLIFD--ISNDDII---EGLSKCKGAHKRFEYK 323
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G + G I DD+AHHPTE++A L A+Q NK + +FQPHTY+R L D+F ++
Sbjct: 324 GELNGVTIIDDYAHHPTEIKATLSTAKQINHNK-IYCIFQPHTYTRTKALFDEFTECFND 382
Query: 487 ADQVVVSAV 495
D++++ V
Sbjct: 383 TDELILMDV 391
>gi|298293097|ref|YP_003695036.1| UDP-N-acetylmuramate--L-alanine ligase [Starkeya novella DSM 506]
gi|296929608|gb|ADH90417.1| UDP-N-acetylmuramate/alanine ligase [Starkeya novella DSM 506]
Length = 469
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 158/427 (37%), Positives = 230/427 (53%), Gaps = 48/427 (11%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G+ V GSD+ S+ ++ L E G +HIGH+ NI G
Sbjct: 8 GPIHFVGIGGIGMSGIAEVLHNLGYTVQGSDVSESANVKRLTEKGIKVHIGHAAGNIDG- 66
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
+V SSAI +DN E++ A++ +P+ +R LA+L + +A++G+HGK+TT
Sbjct: 67 -----AAVLVVSSAIRRDNPELVAARAKRLPVVRRAEMLAELMRLKSCVAIAGTHGKTTT 121
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
S++A +L A G D T I G + + + G G+ V+EADE DG FL L VA+V
Sbjct: 122 TSLVATLLDAGGFDPTVINGGIINAYGTNARL-GDGEWMVVEADESDGTFLKLPVEVAIV 180
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D F+ DAV++ FR F+ + G V+C D +
Sbjct: 181 TNIDPEHLDHFKTFDAVQAAFRSFIDNLPFYGFAVMCTDHPVVQ---------------- 224
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG-SDYILCERGR------P 368
DL G+ D ++ITYG + D V +++GG + + RGR
Sbjct: 225 --------DLVGRVEDRRVITYGENPQAD--VRLVDLDLRGGVCRFNVLFRGRNGDVRHE 274
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
L + L +PG HN LN+ A IA L Q ++ L+ F GV RRF G
Sbjct: 275 LRDLVLPMPGRHNALNATAAIAVAHELGASDEQ-------IRSALAGFGGVKRRFTRTGE 327
Query: 429 IYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
+ G I+DD+ HHP E+ AVL+AAR + +IAV QPH Y+RL L D FA ++AD
Sbjct: 328 VNGVTIFDDYGHHPVEIAAVLRAARASTEGQ-VIAVVQPHRYTRLQSLFDQFATCFNDAD 386
Query: 489 QVVVSAV 495
V+V+ V
Sbjct: 387 HVIVADV 393
>gi|77460893|ref|YP_350400.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas fluorescens
Pf0-1]
gi|109892724|sp|Q3K745.1|MURC_PSEPF RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|77384896|gb|ABA76409.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas fluorescens
Pf0-1]
Length = 486
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 156/428 (36%), Positives = 217/428 (50%), Gaps = 47/428 (10%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG G+ +A++ L G+EVSGSDL S E L GA + IGH N
Sbjct: 15 RIRRIHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKASPVTERLESFGAQIFIGHRAENAA 74
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
D +V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+
Sbjct: 75 AAD------VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKT 128
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S++A V A G D T ++G + + G + + EADE D FL L P VA
Sbjct: 129 TTTSLIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVA 187
Query: 254 VVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
VVTN+D +H+ ++ D + +K F FL + G V+C D R +L +K+ T
Sbjct: 188 VVTNIDADHMATYDGDFNKLKKTFVEFLHNLPFYGLAVMCLDDPVVREILPLVKRPT--- 244
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER-GRPLAQ 371
+TYGFS D A +V QG + R R
Sbjct: 245 ----------------------VTYGFSEDADVRAINV--RQQGMQTFFTVLRPDREPLD 280
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY- 430
+S+ +PG HNVLNSLA I + D+ S E+I LS F GV RRF + G +
Sbjct: 281 VSVNMPGNHNVLNSLATIC----IATDEGVSDEAIVQ---GLSGFQGVGRRFQVYGELPV 333
Query: 431 ---GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ DD+ HHPTEV AV++A R +P + L+ V+QPH YSR L DDF N L++A
Sbjct: 334 DGGNVMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVNVLADA 393
Query: 488 DQVVVSAV 495
+ +++ V
Sbjct: 394 NVLLLMEV 401
>gi|402698521|ref|ZP_10846500.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas fragi A22]
Length = 488
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 157/428 (36%), Positives = 220/428 (51%), Gaps = 47/428 (10%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG G+ +A++ L G+EVSGSDL S E L GA++ IGH N
Sbjct: 15 RIRRIHFVGIGGVGMCGIAEVLLNLGYEVSGSDLNASPVTERLESFGAHIFIGHRAENAA 74
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
D +V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+
Sbjct: 75 TAD------VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKT 128
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S+LA V A G D T ++G + + G + + EADE D FL L P VA
Sbjct: 129 TTTSLLASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPMVA 187
Query: 254 VVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
VVTN+D +H+ +E D + +K F FL + G V+C D R +L +K+ T
Sbjct: 188 VVTNIDADHMATYEGDFNKLKKTFVEFLHNLPFYGLAVLCLDDPVVREILPLVKRPT--- 244
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER-GRPLAQ 371
+TYGFS D A +V QG + R R
Sbjct: 245 ----------------------VTYGFSEAADVRAINV--RQQGMQTFFTVLRPDREPLD 280
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG--TI 429
+S+ +PG HNVLN+LA I + D+ S E+I LS F GV RRF + G +
Sbjct: 281 VSVNMPGNHNVLNALATIC----IASDEGISDEAIVQ---GLSGFEGVGRRFQVYGELPV 333
Query: 430 YGCHIY--DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
G H+ DD+ HHPTEV AV++A R +P++ L+ V+QPH +SR L DDF L++A
Sbjct: 334 EGGHVMLVDDYGHHPTEVAAVIKAVRGGWPDRRLVMVYQPHRFSRTRDLYDDFVQVLADA 393
Query: 488 DQVVVSAV 495
+ +++ V
Sbjct: 394 NVLLLMEV 401
>gi|429331492|ref|ZP_19212246.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas putida CSV86]
gi|428763824|gb|EKX85985.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas putida CSV86]
Length = 484
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 156/430 (36%), Positives = 218/430 (50%), Gaps = 49/430 (11%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
R IHFVGIGG G+ +A++ L G++VSGSDL S E L GA + IGH N
Sbjct: 14 RRIRRIHFVGIGGVGMCGIAEVLLNLGYQVSGSDLKESPVTERLKSFGAEIFIGHRAENA 73
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
D +V SSAI N E+ A +P+ R LA+L + IAV+G+HGK
Sbjct: 74 ASAD------VLVVSSAINTANPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGK 127
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+TT S+LA V A G D T ++G + + G + + EADE D FL L P V
Sbjct: 128 TTTTSLLASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLV 186
Query: 253 AVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
AVVTN+D +H+ +E D + +K F FL + G V+C D R +L +K+
Sbjct: 187 AVVTNIDADHMATYEGDFNKLKKTFVEFLHNLPFYGLAVVCLDDPVVREILPLVKRPA-- 244
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPL 369
+TYGFS D A +V Q G + + + R R
Sbjct: 245 -----------------------VTYGFSEEADVRAINVR---QSGMQTHFTVLRRDRAP 278
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
+S+ +PG HNVLN+LA IA + D+ S E+I LS F GV RRF + G +
Sbjct: 279 LDVSVNMPGNHNVLNALATIA----IATDEGISDEAIVQ---GLSGFQGVGRRFQVYGEL 331
Query: 430 Y----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
+ DD+ HHPTEV AV++A R +P + L+ V+QPH YSR L DDF L+
Sbjct: 332 PVEGGSVMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVQVLA 391
Query: 486 EADQVVVSAV 495
+A+ +++ V
Sbjct: 392 DANVLLLMEV 401
>gi|415728872|ref|ZP_11472210.1| UDP-N-acetylmuramate--alanine ligase [Gardnerella vaginalis 6119V5]
gi|388064872|gb|EIK87387.1| UDP-N-acetylmuramate--alanine ligase [Gardnerella vaginalis 6119V5]
Length = 525
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 154/448 (34%), Positives = 237/448 (52%), Gaps = 41/448 (9%)
Query: 70 DFKNRK--GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
D KN G +HF+GIGG+G+S LA++ ++G VSG D + + + L E G + IG
Sbjct: 26 DSKNASTLGRVHFIGIGGAGMSVLAEMLHEEGVSVSGCDREENDHTKRLEELGIAVEIGQ 85
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
+ S+++ D +V SSAI +N EI+ A + GV + R LA L + V+
Sbjct: 86 NASHVESAD------VLVYSSAIKPNNPEIVAAYANGVKLVHRSDILALLLASKTGVTVA 139
Query: 188 GSHGKSTTASMLAYVLKAMG----DDLTAIVGAHVPQFPDGSIFYGG----GKNFVLEAD 239
G+HGK+TT+S+L+++L G D + +G + Q DG++ GG G V EAD
Sbjct: 140 GAHGKTTTSSLLSHMLSVAGTGELSDPSYAIGGSI-QSADGTVIDGGHAGKGSVMVAEAD 198
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCAR 299
E DG F PS+A+VTN + +H+D + + + F + H++IC D + AR
Sbjct: 199 ESDGSFEKYRPSIAIVTNAEADHLDHYGSSERYREAFVEHVSH--AISHVIICADDEGAR 256
Query: 300 SLLDQIKQDT-------GLKYSGGVVSNQSSDLW---GQGHDYKIITYGFSSFNDWYAES 349
+L+++ +T G S S + +L G H+ + G F +
Sbjct: 257 KVLEKMSDETLRATIAYGAYDSWASTSARVQNLAQFAGIKHESEQAVSGREVFTLVLPGN 316
Query: 350 VCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLN-SLAVIATVLTLIGDKRQSHESIAC 408
+ N+ G + I E L ++SL IPG+HN N S A+IA VL +G K + A
Sbjct: 317 IAGNIAGNAGKI--ENSVSL-EVSLLIPGLHNARNASAAIIAAVL--LGMKPEDAARGA- 370
Query: 409 LKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPH 468
F G SRRFD+ G + G + DD+AHHPTE+ A+L+AAR+R+ + L +FQPH
Sbjct: 371 -----QSFRGASRRFDIRGCVNGVTVVDDYAHHPTEIEALLRAARRRYTSAKLRVLFQPH 425
Query: 469 TYSRLVVLKDDFANALSEADQVVVSAVL 496
+SR +FANAL+ AD V+V+ +
Sbjct: 426 LFSRTRAFASEFANALALADDVIVTGIF 453
>gi|375288995|ref|YP_005123536.1| UDP-N-acetyl muramate--L-alanine ligase [Corynebacterium
pseudotuberculosis 3/99-5]
gi|371576284|gb|AEX39887.1| UDP-N-acetyl muramate--L-alanine ligase [Corynebacterium
pseudotuberculosis 3/99-5]
Length = 485
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 143/439 (32%), Positives = 224/439 (51%), Gaps = 64/439 (14%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H +GIGG+G+S +A++ L +G VSGSD+ S + L GA++ +GH+ N+ +
Sbjct: 13 VHLIGIGGAGMSGVARILLSRGATVSGSDVKDSRAVLALRFMGAHVAVGHAAENL--SIA 70
Query: 138 SRFPNAVVAS-SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
P VV S +AIPQDN E++ A+ +G+P+ +R L +L E + ++G+HGK++T
Sbjct: 71 GEKPTVVVTSFAAIPQDNPELVAARELGIPVIRRSDLLGELMEGSTQVLIAGTHGKTSTT 130
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM ++A G D + +G + + + G G FV EADE D L P++AV+T
Sbjct: 131 SMAVVAMQAAGMDPSFAIGGQLNKAGTNA-HQGTGDAFVAEADESDASLLRYKPNIAVIT 189
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F+ E+A +F +F ++ G LV+C D L +I +
Sbjct: 190 NIEPDHLDFFKSEEAYFEVFEKFADRLVPGVSLVVCLDDPHTAMLGQKIHE--------- 240
Query: 317 VVSNQSSDLWGQGHDYKIITYG---------------FSSFNDWYAESVCPNVQGGSDYI 361
+ D K++ YG SF ++ +V V GG +
Sbjct: 241 -----------KHKDIKVVGYGTVAASAEYPDIAKTVVESFEITHSGTVATIVVGGQE-- 287
Query: 362 LCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSR 421
++ L+ PG H VLN+ A + + GD + L +S F GV R
Sbjct: 288 --------TEVVLRTPGRHMVLNAAAALTAGVIAGGD-------LFKLAAGISDFSGVRR 332
Query: 422 RFDLIGTI-----YGCHIYDDFAHHPTEVRAVLQAARQRFPNKA---LIAVFQPHTYSRL 473
RF+ G + G +YDD+AHHPTEV AVL AAR + + L+ +FQPH YSR
Sbjct: 333 RFEYHGVVAEGDFAGIELYDDYAHHPTEVSAVLTAARAKLQARGQGRLLVIFQPHLYSRT 392
Query: 474 VVLKDDFANALSEADQVVV 492
+ D+FA ALS AD+ +V
Sbjct: 393 INFVDEFAAALSSADEAIV 411
>gi|359398442|ref|ZP_09191461.1| UDP-N-acetylmuramate--alanine ligase [Novosphingobium
pentaromativorans US6-1]
gi|357600133|gb|EHJ61833.1| UDP-N-acetylmuramate--alanine ligase [Novosphingobium
pentaromativorans US6-1]
Length = 469
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 151/424 (35%), Positives = 226/424 (53%), Gaps = 43/424 (10%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G+ V GSD+ ++GL + G + IGH+ N+ G
Sbjct: 9 GTIHFVGIGGIGMSGIAEVMHNLGYSVQGSDIAEGYVIDGLRKRGIKVMIGHAGENVAG- 67
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
VV S+A+ +DN E+++A +P+ +R LA+L N +AV+G+HGK+TT
Sbjct: 68 -----AAVVVTSTAVKRDNPEVVYALEHRIPVVRRAEMLAELMRLKNTVAVAGTHGKTTT 122
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L A G D T I G + + + G V+EADE DG FL L ++AVV
Sbjct: 123 TSMVAALLDAGGIDPTVINGGIINSYGSNARL-GASDWMVVEADESDGSFLRLDGTLAVV 181
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D + + VK F F++ + G ++C D + ++ +++
Sbjct: 182 TNIDPEHLDHYGSFERVKEAFVEFIENVPFYGAALLCIDHPEVQGVISKVR--------- 232
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS-DYILCERG---RPLAQ 371
D +++TYGFS+ D E+V P G D L +R R +
Sbjct: 233 ---------------DRRVVTYGFSAQADIRGENVTPFPGGNRFDVALRQRDGSFRRIEG 277
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG 431
I L +PG HNV N+LA + + + S C+K +KF GV RRF +G + G
Sbjct: 278 IELPMPGRHNVQNALAAVGVAVEM-------GCSDECIKGGFAKFGGVKRRFTKVGEVDG 330
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
I DD+ HHP E+RAVL AAR+ + +IAV QPH ++RL D+F A ++AD V
Sbjct: 331 VAIIDDYGHHPVEIRAVLAAAREGVKGR-VIAVVQPHRFTRLRDHMDEFQTAFNDADVVY 389
Query: 492 VSAV 495
S V
Sbjct: 390 ASPV 393
>gi|313891497|ref|ZP_07825110.1| UDP-N-acetylmuramate--L-alanine ligase [Dialister microaerophilus
UPII 345-E]
gi|313120074|gb|EFR43253.1| UDP-N-acetylmuramate--L-alanine ligase [Dialister microaerophilus
UPII 345-E]
Length = 463
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 144/428 (33%), Positives = 231/428 (53%), Gaps = 50/428 (11%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
N HFVGIGG G+ ALAK+ + +G+ +SGSD V+SS +E L + G + +GH+ NI
Sbjct: 4 NNYKRFHFVGIGGVGMRALAKIMIDKGYIISGSDNVYSSELENLRKLGVEIFVGHNPQNI 63
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
+ D ++ S+AI ++N E+L AK +P++ R LA + I V+G+HGK
Sbjct: 64 KNAD------VLIVSTAISKNNSEVLEAKKHKIPVFHRSDLLAAILCGGKSICVAGAHGK 117
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
STT++M+ V T ++G V SIF G G+ + EADE DG FL +P +
Sbjct: 118 STTSAMIGKVFCDAEKHPTVVLGGKVDYLNGNSIF-GNGEFVIAEADESDGSFLKFNPFI 176
Query: 253 AVVTNLDWEHVDIFEDEDAVKSIFRRFLKQI-RVGGHLVICGDSQCARSLLDQIKQDTGL 311
+V+TN++ +H+D + + +K+ F +F+ Q ++ G+ ++C D++ +S+L ++ +++ +
Sbjct: 177 SVITNIEDDHLDHYLTVENIKNAFIKFINQTDKINGNTILCIDNEGVKSILPKLDKNSYI 236
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSS----FNDWYAESVCPNVQGGSDYILCERGR 367
Y G N +YK I + F+ ++ ES
Sbjct: 237 TY--GTSDNA---------EYKAINKRYIDSHMMFDVYHKESF----------------- 268
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
L +SL IPG HNV N+LA + T L D + +S L +F GV RRF I
Sbjct: 269 -LGTVSLMIPGTHNVRNALAALVTGLICGIDFKTIAKS-------LMEFNGVKRRFQ-IK 319
Query: 428 TIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
I DD+AHHPTE+ + L+AA++ ++ +I FQPH YSR +LK +FANA A
Sbjct: 320 YSGEVKIVDDYAHHPTEIMSTLKAAKECGKHR-VICAFQPHRYSRTNLLKYEFANAFDNA 378
Query: 488 DQVVVSAV 495
D + ++ +
Sbjct: 379 DIIFITDI 386
>gi|289624983|ref|ZP_06457937.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
aesculi str. NCPPB 3681]
gi|289647041|ref|ZP_06478384.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
aesculi str. 2250]
gi|298156877|gb|EFH97967.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 486
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 154/425 (36%), Positives = 219/425 (51%), Gaps = 49/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HFVGIGG G+ +A++ L G+EVSGSDL S+ E L GA + IGH N G D
Sbjct: 19 VHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKGSAVTERLESFGAQIFIGHRAENTIGAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 78 -----VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ +E D + +K F FL + G V+C D R +L +K+ T
Sbjct: 192 IDADHMATYEGDFNKLKKTFVEFLHNLPFYGLAVMCIDDPVVREILPLVKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLAQISL 374
+TYGFS D A +V Q G + + + R R +S+
Sbjct: 245 ------------------LTYGFSESADIRAINVR---QDGMLTFFTVLRRDREPLDVSV 283
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY---- 430
+PG HNVLNSLA IA + D+ S E+I LS F GV RRF + G +
Sbjct: 284 NMPGNHNVLNSLATIA----IATDEGVSDEAIVQ---GLSGFQGVGRRFQVYGELPVDGG 336
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP EV AV+ A R +P++ L+ V+QPH +SR L DDF L++A+ +
Sbjct: 337 NVMLVDDYGHHPREVAAVINAVRGGWPDRRLVMVYQPHRFSRTRDLYDDFVQVLADANVL 396
Query: 491 VVSAV 495
++ V
Sbjct: 397 LLMEV 401
>gi|71275121|ref|ZP_00651408.1| UDP-N-acetylmuramate--alanine ligase [Xylella fastidiosa Dixon]
gi|170731110|ref|YP_001776543.1| UDP-N-acetylmuramate--L-alanine ligase [Xylella fastidiosa M12]
gi|229620438|sp|B0U4Z6.1|MURC_XYLFM RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|71163930|gb|EAO13645.1| UDP-N-acetylmuramate--alanine ligase [Xylella fastidiosa Dixon]
gi|167965903|gb|ACA12913.1| UDP-N-acetylmuramate--alanine ligase [Xylella fastidiosa M12]
Length = 477
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 153/426 (35%), Positives = 224/426 (52%), Gaps = 50/426 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HFVGIGG+G++ +A++ L G+EVSGSD + L GA + GHS +N+ G D
Sbjct: 18 VHFVGIGGAGMTGIAEVMLTLGYEVSGSDNADNVATRRLATLGARVMRGHSAANVLGTD- 76
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSAI +DN E++ A+S +PI R LA+L + IAV+G+HGK+TT S
Sbjct: 77 -----CVVVSSAIREDNPELMEARSQRIPIMPRAAMLAELMRFRHGIAVAGTHGKTTTTS 131
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL G D T ++G + + G G+ V+EADE DG FL L+P VAVVTN
Sbjct: 132 LIAAVLSEGGLDPTFVIGGQL-LAAGANAKLGAGQWLVVEADESDGSFLRLNPLVAVVTN 190
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H++ + D +K F FL+++ G ++C D
Sbjct: 191 IDADHLENYGNDFSRIKDAFTEFLQRLPFYGLALLCLDDP-------------------- 230
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSD--YILCERGRPLAQISL 374
+ ++L G+ + ++TYG + D AE V VQ G+ + LC + ++L
Sbjct: 231 ----EVAELAGKARRH-VMTYGIDAAADVRAEDV---VQDGARMYFTLCLPEGKVIPVTL 282
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY---- 430
+PG HNVLN+LA A Q + L F+G+ RRF+ +G +
Sbjct: 283 ALPGRHNVLNALAASAV-------GWQLGVPPEVIGRALKSFVGIGRRFNDLGDVAIGNG 335
Query: 431 GC-HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
C + DD+ HHP E+ AV AAR +P+K L+ FQPH YSR D FA LS D
Sbjct: 336 ACVRLIDDYGHHPRELEAVFAAARGGWPDKRLVVAFQPHRYSRTRDQFDAFAAVLSSVDA 395
Query: 490 VVVSAV 495
+V+S V
Sbjct: 396 LVLSEV 401
>gi|71729515|gb|EAO31623.1| UDP-N-acetylmuramate--alanine ligase [Xylella fastidiosa Ann-1]
Length = 439
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 153/426 (35%), Positives = 224/426 (52%), Gaps = 50/426 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HFVGIGG+G++ +A++ L G+EVSGSD + L GA + GHS +N+ G D
Sbjct: 18 VHFVGIGGAGMTGIAEVMLTLGYEVSGSDNADNVATRRLATLGARVMRGHSAANVLGTD- 76
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSAI +DN E++ A+S +PI R LA+L + IAV+G+HGK+TT S
Sbjct: 77 -----CVVVSSAIREDNPELMEARSQRIPIMPRAAMLAELMRFRHGIAVAGTHGKTTTTS 131
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL G D T ++G + + G G+ V+EADE DG FL L+P VAVVTN
Sbjct: 132 LIAAVLSEGGLDPTFVIGGQL-LAAGANAKLGAGQWLVVEADESDGSFLRLNPLVAVVTN 190
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H++ + D +K F FL+++ G ++C D
Sbjct: 191 IDADHLENYGNDFSRIKDAFTEFLQRLPFYGLALLCLDDP-------------------- 230
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSD--YILCERGRPLAQISL 374
+ ++L G+ + ++TYG + D AE V VQ G+ + LC + ++L
Sbjct: 231 ----EVAELAGKARRH-VMTYGIDAAADVRAEDV---VQDGARMYFTLCLPEGKVIPVTL 282
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY---- 430
+PG HNVLN+LA A Q + L F+G+ RRF+ +G +
Sbjct: 283 ALPGRHNVLNALAASAV-------GWQLGVPPEVIGRALKSFVGIGRRFNDLGDVAIGNG 335
Query: 431 GC-HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
C + DD+ HHP E+ AV AAR +P+K L+ FQPH YSR D FA LS D
Sbjct: 336 ACVRLIDDYGHHPRELEAVFAAARGGWPDKRLVVAFQPHRYSRTRDQFDAFAAVLSSVDA 395
Query: 490 VVVSAV 495
+V+S V
Sbjct: 396 LVLSEV 401
>gi|262195225|ref|YP_003266434.1| UDP-N-acetylmuramate--L-alanine ligase [Haliangium ochraceum DSM
14365]
gi|262078572|gb|ACY14541.1| UDP-N-acetylmuramate/alanine ligase [Haliangium ochraceum DSM
14365]
Length = 472
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 147/420 (35%), Positives = 218/420 (51%), Gaps = 41/420 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HFVGIGG G+ +A++ + G++VSGSD+ S+ L G + GH N+
Sbjct: 9 VHFVGIGGMGMCGIAEVLINMGYQVSGSDMQESAITRHLQSIGGTISYGHRAENLDQV-- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ VV SSAI N E+ A++ +P+ R L +L +AV+GSHGK+TT +
Sbjct: 67 ----DVVVVSSAIRGYNPEVEAARARMIPVIPRAEMLGELMRMKTGLAVAGSHGKTTTTT 122
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A VL A G D TA++G V + +G + V EADE DG FL L+P+ AVVTN
Sbjct: 123 MIASVLMAAGMDPTAVIGGRVNALGLANARWGKSEYLVAEADESDGSFLTLAPTFAVVTN 182
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
LD EH+D + D + F FL ++ G +C D+ +++L QI++
Sbjct: 183 LDPEHLDHYGSVDNLHRAFINFLNRLPFYGLAAVCLDNAGVQAILPQIQK---------- 232
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPLAQISLQI 376
+ +TYG +S + A ++ P +G + Y+ R L +I L +
Sbjct: 233 ---------------RFVTYGMASQATYRARNIRP--EGLVTRYVAWRRAEELGEIHLPM 275
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG HNVLNSLAV+A L L F G+ RRF + G + G + D
Sbjct: 276 PGQHNVLNSLAVLAICDAL-------DVPFEVTAKALQSFEGIQRRFTVRGEVAGITVVD 328
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAVL 496
DF HHP EVR+ L AR FP++ +IA FQPH Y+R +FA + +AD+V+++ V
Sbjct: 329 DFGHHPAEVRSTLAGARSAFPSRRIIAAFQPHRYTRTRDQFQEFARSFYDADKVIITDVF 388
>gi|253699158|ref|YP_003020347.1| UDP-N-acetylmuramate--L-alanine ligase [Geobacter sp. M21]
gi|259509773|sp|C6DZK7.1|MURC_GEOSM RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|251774008|gb|ACT16589.1| UDP-N-acetylmuramate/alanine ligase [Geobacter sp. M21]
Length = 461
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 149/419 (35%), Positives = 219/419 (52%), Gaps = 42/419 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+S +A++ L G++VSGSDL S + L G + GH+ N+ D
Sbjct: 8 IHFVGIGGIGMSGIAEVLLNLGYKVSGSDLRGSEITQRLESLGGEIFFGHAAENVANAD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSA+ +DN E++ A +P+ R LA+L IAV+G+HGK+TT S
Sbjct: 67 -----VVVISSAVHEDNPEVVEAHLRLIPVIPRAEMLAELMRMKYGIAVAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A +L G D T ++G + + G G+ V EADE DG FL LSP++AVVTN
Sbjct: 122 MVATILSKGGIDPTIVIGGRLNSLGTNARL-GQGQFLVAEADESDGSFLLLSPTIAVVTN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D +H+D + + +K F F+ +I G V+C D+ +L ++K+
Sbjct: 181 IDADHLDFYSGIEEIKDTFVEFINKIPFYGLAVLCLDNGNVADVLPRVKK---------- 230
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPLAQISLQI 376
+ +YG S+ D+ A V + G + ++ +G L +I+ +
Sbjct: 231 ---------------RFTSYGLSAQADFRATDV--RLSGFSTSFVAHHKGVRLGEITFSM 273
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG HNVLN+LA IA + L E A F GV RRF L G G + D
Sbjct: 274 PGAHNVLNALAAIAVAMELDIPFETIQEGFAG-------FGGVGRRFHLKGEANGIMVVD 326
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+ HHPTE++A L AA+ F L+ VFQPH YSR L +DF A +AD ++++ +
Sbjct: 327 DYGHHPTEIKATLGAAKAGFAENRLVVVFQPHRYSRTKELFEDFVKAFHDADVLILTDI 385
>gi|443468300|ref|ZP_21058530.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas pseudoalcaligenes
KF707]
gi|442897417|gb|ELS24359.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas pseudoalcaligenes
KF707]
Length = 486
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 154/425 (36%), Positives = 218/425 (51%), Gaps = 49/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G+ VSGSDL S+ E L + GA + IGH N + D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYRVSGSDLKTSAVTERLEKFGAQIFIGHRAENAENAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSA+ + N E+ A +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 78 -----VLVVSSAVNKSNPEVAVALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A V A G D T ++G + + G + V EADE D FL L P VAVVTN
Sbjct: 133 LIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLVAEADESDASFLHLQPMVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ +E D + +K F FL + G V+C D R +L Q+ + T
Sbjct: 192 IDADHMSTYEGDFNRLKKTFVEFLHNLPFYGLAVLCVDDPVVREILPQVARPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSD--YILCERGRPLAQISL 374
+TYGF+ D A +V Q G + + + R +S+
Sbjct: 245 ------------------VTYGFAEDADVRAINVR---QEGMRTWFTVLRKDREPLDVSV 283
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY---- 430
+PG HNVLNSLA IA + D+ S E+I LS F GV RRF + G +
Sbjct: 284 NMPGNHNVLNSLATIA----IATDEGISDEAIVQ---GLSGFQGVGRRFQVYGELQVEGG 336
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP EV AV++A R +P + L+ V+QPH YSR L DDF L EA+ +
Sbjct: 337 SVMLVDDYGHHPREVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVQVLGEANVL 396
Query: 491 VVSAV 495
++ V
Sbjct: 397 LLMEV 401
>gi|170700184|ref|ZP_02891202.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia ambifaria
IOP40-10]
gi|170134916|gb|EDT03226.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia ambifaria
IOP40-10]
Length = 465
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 149/426 (34%), Positives = 216/426 (50%), Gaps = 48/426 (11%)
Query: 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGND 136
IHFVGIGG+G+S +A++ + G+EVSGSDL ++ + L GA + IGH +NI G
Sbjct: 7 QIHFVGIGGAGMSGIAEVLVNLGYEVSGSDLSRNAVTDRLAALGARISIGHDAANIAG-- 64
Query: 137 GSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
NAVV S+A+ DN E+L A+ GVPI +R LA+L IA++G+HGK+TT
Sbjct: 65 ----ANAVVVSTAVRSDNPEVLAARHQGVPIVQRAVMLAELMRLKQGIAIAGTHGKTTTT 120
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
S++A VL A G D T ++G + + G G V EADE D FL L P + V+T
Sbjct: 121 SLVASVLAAGGLDPTFVIGGRLIS-AGANARLGTGDFIVAEADESDASFLNLYPVIEVIT 179
Query: 257 NLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
N+D +H+D + D +K F F +++ G V+C D R ++ I +
Sbjct: 180 NIDADHMDTYGHDFARLKQAFIEFTQRLPFYGSAVVCVDDPNVRQIIPFISK-------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQ 375
++ YG S AE + G + + GR + L
Sbjct: 232 -----------------PVVRYGLSPDAQVRAEDIDAR-DGRMHFTVIREGRAPLAVVLN 273
Query: 376 IPGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH- 433
+PG+HNV N+LA IA L + D ++ L++F GV RRF G +
Sbjct: 274 LPGLHNVQNALAAIAIATDLGVSDD--------AIQQALAEFNGVGRRFQRYGEVPSADG 325
Query: 434 ----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
+ DD+ HHP E+ A + AAR FP + L+ FQPH Y+R DDF N LS D
Sbjct: 326 GQYTLIDDYGHHPVEMAATVAAARGAFPGRRLVLAFQPHRYTRTRDCFDDFVNVLSTVDA 385
Query: 490 VVVSAV 495
+V++ V
Sbjct: 386 LVLTEV 391
>gi|71735898|ref|YP_276229.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|416018477|ref|ZP_11565405.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
glycinea str. B076]
gi|416025263|ref|ZP_11569044.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
glycinea str. race 4]
gi|422403834|ref|ZP_16480890.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
glycinea str. race 4]
gi|109892721|sp|Q48EF9.1|MURC_PSE14 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|71556451|gb|AAZ35662.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320322449|gb|EFW78542.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
glycinea str. B076]
gi|320330082|gb|EFW86069.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330874984|gb|EGH09133.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 486
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 154/425 (36%), Positives = 219/425 (51%), Gaps = 49/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G+EVSGSDL S+ E L GA + +GH N G D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKGSAVTERLESFGAQIFVGHRAENTVGAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 78 -----VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ +E D + +K F FL + G V+C D R +L +K+ T
Sbjct: 192 IDADHMATYEGDFNKLKKTFVEFLHNLPFYGLAVMCIDDPVVREILPLVKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLAQISL 374
+TYGFS D A +V Q G + + + R R +S+
Sbjct: 245 ------------------LTYGFSESADIRAINVR---QDGMLTFFTVLRRDREPLDVSV 283
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY---- 430
+PG HNVLNSLA IA + D+ S E+I LS F GV RRF + G +
Sbjct: 284 NMPGNHNVLNSLATIA----IATDEGVSDEAIVQ---GLSGFQGVGRRFQVYGELPVEGG 336
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP EV AV+ A R +P++ L+ V+QPH +SR L DDF L++A+ +
Sbjct: 337 NVMLVDDYGHHPREVSAVISAVRGGWPDRRLVMVYQPHRFSRTRDLYDDFVQVLADANVL 396
Query: 491 VVSAV 495
++ V
Sbjct: 397 LLMEV 401
>gi|71082732|ref|YP_265451.1| UDP-N-acetylmuramate--L-alanine ligase [Candidatus Pelagibacter
ubique HTCC1062]
gi|109892719|sp|Q4FPK6.1|MURC_PELUB RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|71061845|gb|AAZ20848.1| UDP-N-acetylmuramate--L-alanine ligase [Candidatus Pelagibacter
ubique HTCC1062]
Length = 464
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 142/423 (33%), Positives = 217/423 (51%), Gaps = 44/423 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+S LA + + GF V GSD++ + +E L + + I H+ NI
Sbjct: 11 IHFVGIGGIGMSGLALIMKRMGFNVQGSDVLGNKNIERLKKDKIKITISHTKKNIAK--- 67
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSAI +N E++ AK +PIYKR LA + I V+GSHGK+TT S
Sbjct: 68 ---ATIVVISSAIKNNNPELIEAKLKQLPIYKRGEMLANIVSLTKNIVVTGSHGKTTTTS 124
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+LA + D T I G + + + G +LEADE DG F+ + P+ ++VTN
Sbjct: 125 LLASIFSKTKLDPTIINGGVLNAIKNSAKL-GKSDWCILEADESDGSFIHVPPTYSIVTN 183
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D EH+D + +K +F +F+ ++ G IC D + + LL ++K
Sbjct: 184 IDREHMDFYNSMKDLKELFIKFINKVPSFGKSFICIDDKNNKDLLSKLKMKN-------- 235
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILC-----ERGRPLAQI 372
TYG + +++Y +++ + S Y L ++ + +I
Sbjct: 236 ----------------YYTYGTDNKSNFYIKNIKQEKEY-SQYDLAINLPGKKNLTIRKI 278
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC 432
L + G+HN+ NS A IA +T IG + +K L +F GV RRF+ I T
Sbjct: 279 KLPLLGIHNIRNSTAAIAVAVT-IGISQN------IIKKGLKEFKGVQRRFNKIFTHRET 331
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+ YDD+AHHPTE+R VL R + N+ +I +FQPH SRL LK +F+ + +AD V++
Sbjct: 332 NFYDDYAHHPTEIREVLNGVRAAYKNEEVICIFQPHRISRLKDLKKEFSLSFKKADVVIL 391
Query: 493 SAV 495
+
Sbjct: 392 CPI 394
>gi|254246418|ref|ZP_04939739.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia cenocepacia
PC184]
gi|124871194|gb|EAY62910.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia cenocepacia
PC184]
Length = 465
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 149/425 (35%), Positives = 217/425 (51%), Gaps = 48/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ + G+ VSGSDL ++ + L GA + IGH +NI+G
Sbjct: 8 IHFVGIGGAGMSGIAEVLVNLGYAVSGSDLSRNAVTDRLEALGARIAIGHDAANIEG--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
NAVV S+A+ DN E+L A+ GVPI +R LA+L IA++G+HGK+TT S
Sbjct: 65 ---ANAVVVSTAVRSDNPEVLAARRQGVPIVQRAVMLAELMRLKQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL A G D T ++G + + G G V EADE D FL L P + V+TN
Sbjct: 122 LVASVLAAGGLDPTFVIGGRLIS-AGANARLGTGDFIVAEADESDASFLNLYPVIEVITN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D +K F F +++ G V+C D R ++ I +
Sbjct: 181 IDADHMDTYGHDFARLKQAFIEFTQRLPFYGSAVVCVDDPNVRQIIPFISK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++ YG S AE + G + + GR + L +
Sbjct: 232 ----------------PVVRYGLSPDAQVRAEDIDAR-DGRMHFTVIREGRAPLAVVLNM 274
Query: 377 PGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH-- 433
PG+HNV N+LA IA L + D ++L L++F GV RRF G +
Sbjct: 275 PGLHNVQNALAAIAIATDLGVSDD--------AIQLALAEFNGVGRRFQRYGDVPSADGG 326
Query: 434 ---IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP E+ A + AAR FP + L+ FQPH Y+R DDF N LS D +
Sbjct: 327 QYTLIDDYGHHPVEMAATIAAARGAFPGRRLVLAFQPHRYTRTRDCFDDFVNVLSTVDAL 386
Query: 491 VVSAV 495
V++ V
Sbjct: 387 VLTEV 391
>gi|428221346|ref|YP_007105516.1| UDP-N-acetylmuramate--L-alanine ligase [Synechococcus sp. PCC 7502]
gi|427994686|gb|AFY73381.1| UDP-N-acetylmuramate--L-alanine ligase [Synechococcus sp. PCC 7502]
Length = 462
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 147/420 (35%), Positives = 226/420 (53%), Gaps = 47/420 (11%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
HF+GIGG G+SA+A + ++QG++VSGSDL + + L GA ++ GHS NI ++
Sbjct: 13 HFIGIGGIGMSAIAHILVRQGYKVSGSDLAQNQLIAQLQGFGAKIYQGHSADNIDLSN-- 70
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
P +V S+AI N E AKS + I R LA L ++ +A++G+HGK+TT+S+
Sbjct: 71 --PPQIVCSTAISDQNPEFQLAKSQDLAILHRSDVLAALITQFQSVAIAGTHGKTTTSSL 128
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
+AY+ G D T +VG V + G+ G GK + EADE DG +P+V ++TN+
Sbjct: 129 VAYLFLQAGLDPTIVVGGEVRAW-QGNARLGKGKYLIAEADESDGSLTKFAPAVGIITNI 187
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVV 318
+ +H D + V S F+ F ++ +V ++ C D + + IK D + YS +
Sbjct: 188 ELDHTDHYHSLAQVISTFQTFAQRCQV---VITCIDCE---TTAQHIKAD--ITYS---L 236
Query: 319 SNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPG 378
SN +D + I YG S + + ERG+ L ++SL I G
Sbjct: 237 SNPDADYYAVN-----IEYGCYS----------------TKATVIERGQVLGEVSLSILG 275
Query: 379 VHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDF 438
HN+ N+LA IA R + S ++ L FMG SRRF+L G G DD+
Sbjct: 276 KHNLSNALAAIAVA-------RWAEISWLDIQTALPDFMGASRRFELKGKQNGVVFIDDY 328
Query: 439 AHHPTEVRAVLQAARQRFPNKA---LIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
AHHP+E+RA L +A+ + ++A ++A+FQPH YSR +F+ A +AD VVV+ +
Sbjct: 329 AHHPSEIRATLASAKLQSSHQAQHRVVAIFQPHRYSRTAKFLTEFSQAFGDADLVVVTDI 388
>gi|91200088|emb|CAJ73131.1| similar to UDP-N-acetylmuramate-L-alanine ligase [Candidatus
Kuenenia stuttgartiensis]
Length = 498
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/422 (32%), Positives = 221/422 (52%), Gaps = 38/422 (9%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R ++F+GIGG+G+SALA++ + +G V+GSD++ S + L + G ++ S
Sbjct: 21 RGNRVYFIGIGGNGMSALARILVSEGCIVAGSDILLSPLISSLEKIGVTVN-----SKQD 75
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
G+ S + V+ S+AI + N E+ A+ +G+ + K L L ++ IA+SG+HGK+
Sbjct: 76 GSMMSLETDMVIVSAAIQEGNPELKVARQLGIKVVKYSQILGSLMQEKRGIAISGTHGKT 135
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT++M++ +LK D T ++G VP G+ G G FV EA EY+ FL L PS+
Sbjct: 136 TTSAMISTILKKAELDPTYVIGGEVPDI-GGNAHLGKGNLFVAEACEYNSSFLDLVPSIG 194
Query: 254 VVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 313
V+TN++ +H+D + + + + + F F I G LV+ D +
Sbjct: 195 VITNIEEDHLDYYGNLEEIVNAFGHFANLIAKNGLLVVNDDDRNV--------------- 239
Query: 314 SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQIS 373
V + +S K TY + WYA+ + P QG + + + RG+
Sbjct: 240 --AVAAKRSV--------CKRETYSLRHTSHWYAKKILPTTQGINKFRVYNRGKIFGDFW 289
Query: 374 LQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH 433
L+IPG HN+LN+LA IA V T IG ++ +K L F G RRF ++
Sbjct: 290 LKIPGSHNILNALAAIA-VCTSIGVDKE------IIKTSLESFKGAKRRFQIVAIKNNIT 342
Query: 434 IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVS 493
I DD+AHHPTE+ L+AAR+ +P + + V+QPH YSR L + + AD+V ++
Sbjct: 343 IIDDYAHHPTEIDVTLKAARELYPARKICCVYQPHQYSRTRHLLKKLSESFYLADKVALA 402
Query: 494 AV 495
+
Sbjct: 403 DI 404
>gi|225849381|ref|YP_002729545.1| UDP-N-acetylmuramate--alanine ligase [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644549|gb|ACN99599.1| UDP-N-acetylmuramate--alanine ligase [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 454
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 143/427 (33%), Positives = 224/427 (52%), Gaps = 49/427 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
F+ + IHF+GIGGSG++ +A+L L QG+ +SGSDL S + L E GA ++IGHS
Sbjct: 2 FRGKIRRIHFIGIGGSGMNGIAELLLNQGYTISGSDLKESYTTQRLRELGAKVYIGHSED 61
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N++ D + SSA+ DN E+ A+ +G+P R LA+L IA++GSH
Sbjct: 62 NVKDVDVVVY------SSAVKPDNPELKKARELGIPTIPRGEMLAELMRFKYGIAIAGSH 115
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT SM+ VL G D T ++G + + + G G+ V E+DE DG FL L+P
Sbjct: 116 GKTTTTSMVGTVLGKTGFDPTVVIGGKLEAYGSNAKL-GRGEFLVAESDESDGSFLKLTP 174
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
++ + N+D EH+ ++D + +K+ F F ++ G +V D + +S++ +I++
Sbjct: 175 TIVSINNIDLEHLGFYKDLEDIKNAFVEFANKVPFYGFVVANIDDENVKSIIPRIERKI- 233
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIIT--YGFSSFNDWYAESVCPNVQGGSDYILCERGRP 368
+K+ S D +G+D K++ Y F ND+
Sbjct: 234 IKFG------LSKDADIRGYDLKLVNGRYKF-KINDF----------------------- 263
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
+I L +PG+HNV N+LA I+ L +K L F RRF+ I
Sbjct: 264 -GEIHLSVPGIHNVYNALATISICNEL-------GVPFCVIKESLENFKNAKRRFE-IKY 314
Query: 429 IYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
G + DD+AHHPTE++A L AAR + +I+VFQPH YSR+ L D+F + D
Sbjct: 315 SDGILVIDDYAHHPTEIKATLSAARDMYGQNRIISVFQPHRYSRVYSLFDEFVESFDIPD 374
Query: 489 QVVVSAV 495
V+++ +
Sbjct: 375 IVIITDI 381
>gi|119358484|ref|YP_913128.1| UDP-N-acetylmuramate--L-alanine ligase [Chlorobium phaeobacteroides
DSM 266]
gi|166222971|sp|A1BJX7.1|MURC_CHLPD RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|119355833|gb|ABL66704.1| UDP-N-acetylmuramate--L-alanine ligase [Chlorobium phaeobacteroides
DSM 266]
Length = 466
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 146/422 (34%), Positives = 229/422 (54%), Gaps = 46/422 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H VGIGG+G+SA+A+L L GF V+GSDL E L E GA ++ GH + +D
Sbjct: 9 VHIVGIGGAGMSAIAELLLTSGFGVTGSDLSSGEVTERLSERGAVIYQGHKAEQVGESD- 67
Query: 138 SRFPNAVVASSAI-PQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTT 195
VV SSAI P +NVEI+ A+ G+P+ KRD L +L +YN + VSG+HGK+TT
Sbjct: 68 -----VVVYSSAIRPAENVEIVAAEQAGIPVIKRDEMLGELM-RYNYGVCVSGTHGKTTT 121
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
+M+A +L G+ T ++G V + GS G GK V+EADE+D FL L+P++AV+
Sbjct: 122 TAMIATMLIEAGESPTVMIGG-VSDYLKGSTVVGSGKYLVIEADEFDRAFLKLTPTIAVI 180
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
+L+ EH+D + + ++ F F ++ G ++ C D R L+ + +
Sbjct: 181 NSLESEHMDTYGTIEELRKAFIAFANKVPFYGRVICCVDWPEIRKLIPHLNR-------- 232
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQ 375
+ T+G D A + + + S + + G+ +SL
Sbjct: 233 -----------------RYTTFGIDEPADVMASDMVMD-KNRSRFTVRASGKEYPGVSLN 274
Query: 376 IPGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDL-IGTIYGCH 433
+PG HNV+N+LA A+ L L I +R + L+++ G+ RRF + G
Sbjct: 275 VPGRHNVMNALAAFASGLELGIAPER--------IIAGLTRYSGMRRRFQIKYDNSAGVL 326
Query: 434 IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVS 493
+ DD+AHHP+EV+A ++AAR +PN ++AVFQPH +SR D++ AL AD++ V+
Sbjct: 327 VVDDYAHHPSEVKAAVKAARDGWPNAEIVAVFQPHLFSRTREFADEYGWALLRADKIYVA 386
Query: 494 AV 495
+
Sbjct: 387 DI 388
>gi|404403192|ref|ZP_10994776.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas fuscovaginae
UPB0736]
Length = 486
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 160/472 (33%), Positives = 233/472 (49%), Gaps = 58/472 (12%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
R IHFVGIGG G+ +A++ L G++VSGSDL S + L GA + IGH N
Sbjct: 14 RRIRRIHFVGIGGVGMCGIAEVLLNLGYQVSGSDLKTSPVTDRLESFGAQIFIGHRSENA 73
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
D +V SSA+ + N E+ A +P+ R LA+L + IAV+G+HGK
Sbjct: 74 ASAD------VLVVSSAVNKSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGK 127
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+TT S++A V A G D T ++G + + G + + EADE D FL L P V
Sbjct: 128 TTTTSLIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPMV 186
Query: 253 AVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
AVVTN+D +H+D +E D +K F FL + G V+C D R +L QI + T
Sbjct: 187 AVVTNIDADHMDTYEGDFSKLKKTFVEFLHNLPFYGLAVVCLDDPVVREILPQIARPT-- 244
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPL 369
+TYG D A ++ Q G + + + R R
Sbjct: 245 -----------------------VTYGVHEDADVRAINIR---QAGMQTHFTVLRRDREP 278
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
+S+ +PG HNVLNSLA IA + D+ S E+I LS F GV RRF + G +
Sbjct: 279 LDVSVNMPGNHNVLNSLATIA----IATDEGISDEAIVQ---GLSGFQGVGRRFQVYGEL 331
Query: 430 Y----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
+ DD+ HHPTEV AV++A R +P + L+ V+QPH Y+R L DDF L+
Sbjct: 332 PVDGGSVMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYTRTRDLYDDFVQVLA 391
Query: 486 EADQVVVSAVLVFWLIIFAVSSFWLIMAINSVICIVRSMLPEKQMIGISMER 537
+A+ ++ + ++ + A + +C RS+ Q+ I +ER
Sbjct: 392 DAN-------VLLLMEVYPAGEEAIPGADSRQLC--RSIRQRGQLDPIYIER 434
>gi|398882469|ref|ZP_10637437.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM60]
gi|398199011|gb|EJM85961.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM60]
Length = 486
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 154/428 (35%), Positives = 217/428 (50%), Gaps = 47/428 (10%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG G+ +A++ L G+EVSGSDL S E L GA + IGH N
Sbjct: 15 RIRRIHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKASPVTERLESFGAQIFIGHRAENAA 74
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
D +V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+
Sbjct: 75 AAD------VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKT 128
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S++A V A G D T ++G + + G + + EADE D FL L P VA
Sbjct: 129 TTTSLIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVA 187
Query: 254 VVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
VVTN+D +H+ ++ D + +K F FL + G V+C D R +L Q+K+
Sbjct: 188 VVTNIDADHMATYDGDFNKLKKTFVEFLHNLPFYGLAVVCLDDPVVREILPQVKR----- 242
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER-GRPLAQ 371
++TYGF D A +V QG + R R
Sbjct: 243 --------------------PVVTYGFGDDCDVRAINV--RQQGMQTFFTVLRPDREPLD 280
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY- 430
+S+ +PG HNVLN+LA I + D+ S E+I LS F GV RRF + G +
Sbjct: 281 VSVNMPGNHNVLNALATIC----IATDEGVSDEAIV---QGLSGFQGVGRRFQVYGELPV 333
Query: 431 ---GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ DD+ HHPTEV AV++A R +P + L+ V+QPH YSR L DDF N L++A
Sbjct: 334 EDGSVMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVNVLADA 393
Query: 488 DQVVVSAV 495
+ +++ V
Sbjct: 394 NVLLLMEV 401
>gi|296448262|ref|ZP_06890156.1| UDP-N-acetylmuramate/alanine ligase [Methylosinus trichosporium
OB3b]
gi|296254214|gb|EFH01347.1| UDP-N-acetylmuramate/alanine ligase [Methylosinus trichosporium
OB3b]
Length = 468
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 150/429 (34%), Positives = 227/429 (52%), Gaps = 52/429 (12%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHF+G+GG G+S +A++ L +G++V G+D + ++ L GA +H+GH +
Sbjct: 8 GPIHFIGLGGIGMSGVAEILLARGYDVQGTDAADGANLQRLSAKGARVHVGHDAQWL--G 65
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D + VVASSAI +DN EI A+ +P+ KR LA+L +AV+G+HGK+TT
Sbjct: 66 DAA----VVVASSAIKRDNPEIAEARRRRLPVVKRAEMLAELMRDKRCVAVAGTHGKTTT 121
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
S++A +L A G D T + G + + + G G+ V+EADE DG FL L +A+V
Sbjct: 122 TSLVATLLDAGGLDPTVVNGGIINAYGTNA-RPGAGEWMVVEADESDGTFLKLPAEIAIV 180
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D F D DAVK FR F+ + G +C D AR ++ +I+
Sbjct: 181 TNVDPEHLDHFGDFDAVKRGFRSFIDNLPFYGFAAVCIDHPTAREIIGEIE--------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAES--VCPNVQGG-SDYILCERGRP---- 368
D ++I+YG D AE+ V +++GG + + R R
Sbjct: 232 ---------------DRRVISYG----EDERAEARLVDLDLEGGVGRFAVLIRDRDTGVE 272
Query: 369 --LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
+ ++ L G HN LN+ A IA L S+ ++ L+ F GV RRF
Sbjct: 273 TRIDRLVLPAAGRHNALNATAAIAVAHRL-------GVSLNDIRSGLAGFAGVKRRFTKT 325
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G G I+DD+ HHP E+ AVL+AAR + +IA+ QPH Y+RL L +FA ++
Sbjct: 326 GEWNGVSIFDDYGHHPVEIAAVLRAARASTKGR-VIAIMQPHRYTRLQSLFSEFAGCFAD 384
Query: 487 ADQVVVSAV 495
AD +++ V
Sbjct: 385 ADVTLIADV 393
>gi|373495515|ref|ZP_09586098.1| UDP-N-acetylmuramate-alanine ligase [Eubacterium infirmum F0142]
gi|371964652|gb|EHO82163.1| UDP-N-acetylmuramate-alanine ligase [Eubacterium infirmum F0142]
Length = 461
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 151/426 (35%), Positives = 233/426 (54%), Gaps = 45/426 (10%)
Query: 72 KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSN 131
K RK IH +GIGG GLSA+A++ L +G+ VSGSD+ S + L + GA +++ H N
Sbjct: 6 KYRK--IHCIGIGGIGLSAIAEILLSRGYNVSGSDMKESEITDRLRQTGAVIYLEHVAEN 63
Query: 132 IQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSH 190
++ D VV S+AI +DN E++ AK +G+P R L L ++Y N IA+SG+H
Sbjct: 64 VENAD------LVVYSAAIAEDNPEMVRAKQLGIPTASRAEILGLLMDEYPNSIAISGTH 117
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT SM++ VL+ + T +VG ++ + DG+ G G FV EA EY FL L P
Sbjct: 118 GKTTTTSMVSVVLEKNKLEPTILVGGYLSEI-DGNYKVGKGSFFVTEACEYRDSFLNLRP 176
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
+ V+ N+D +H+D F+D + + F RF K I+ GG+++ + A +++I +
Sbjct: 177 YIEVILNIDSDHLDYFKDIEHIVKSFDRFSKNIKSGGNII----AYDANPFINRIIK--- 229
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
D+ G ITYG++ + V ++ G + + RG P
Sbjct: 230 -------------DIEGA------ITYGYNPSCTYAISDVKFDINGMPSFNISYRGEPQG 270
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+ L +PG HN+LN+ A A L S + I LKL + G RRFD+IG
Sbjct: 271 TMELSVPGEHNILNATAAFACCHQL---GVSSEDIIRVLKL----YTGTKRRFDIIGKAK 323
Query: 431 -GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
I DD+AHHPTE++A L AA Q + + +FQPHTY+R + L DDF ++ AD+
Sbjct: 324 DNITIIDDYAHHPTEIKATLSAA-QNLKHNRIWCLFQPHTYTRTLALFDDFIDSFKGADK 382
Query: 490 VVVSAV 495
++++ +
Sbjct: 383 LILTDI 388
>gi|218708487|ref|YP_002416108.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio splendidus LGP32]
gi|254766031|sp|B7VJ04.1|MURC_VIBSL RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|218321506|emb|CAV17458.1| UDP-N-acetylmuramate-alanine ligase [Vibrio splendidus LGP32]
Length = 486
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 148/439 (33%), Positives = 223/439 (50%), Gaps = 61/439 (13%)
Query: 67 CIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG 126
+V R IHF+GIGG+G+S +A++ L +G++++GSD+ + E L+ GA +++G
Sbjct: 14 AMVPEMRRVKSIHFIGIGGAGMSGIAEVLLNEGYQITGSDIAQNPVTERLVSKGATVYVG 73
Query: 127 HSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAV 186
H SN + VV S+AI ++N EI+ A+ PI +R LA+L + IAV
Sbjct: 74 HQASN------VADASVVVVSTAINEENPEIIAAREARTPIVRRAEMLAELMRFRHGIAV 127
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEA 238
+G+HGK+TT +++ + G D P F +G + G N + EA
Sbjct: 128 AGTHGKTTTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGSSRILIAEA 178
Query: 239 DEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQC 297
DE D FL L P V++VTN++ +H+D + D + +K F FL + G V+C D
Sbjct: 179 DESDASFLHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAVMCVDDPV 238
Query: 298 ARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG 357
R L+ Q+ + ++ITYGFS D E+ Q G
Sbjct: 239 VRELIPQVSR-------------------------QVITYGFSEDADIRIENYVQEGQQG 273
Query: 358 SDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFM 417
+ + G+ I+L IPG HN LN+ A IA + S E+I LK ++
Sbjct: 274 K-FTVVREGKANLDITLNIPGRHNALNASAAIAVAT----EDDISDEAI--LK-AMAGTE 325
Query: 418 GVSRRFDLIG---TIYG-CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRL 473
G RRFD +G T G + DD+ HHPTEV +QAAR + +K L+ +FQPH YSR
Sbjct: 326 GTGRRFDHLGEYETGKGVAMLVDDYGHHPTEVDVTIQAARSGWTDKRLVMIFQPHRYSRT 385
Query: 474 VVLKDDFANALSEADQVVV 492
L DDFAN L + D +++
Sbjct: 386 RDLYDDFANVLEQVDVLIL 404
>gi|302384555|ref|YP_003820377.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium saccharolyticum
WM1]
gi|302195183|gb|ADL02754.1| UDP-N-acetylmuramate/alanine ligase [Clostridium saccharolyticum
WM1]
Length = 459
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 147/420 (35%), Positives = 219/420 (52%), Gaps = 42/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI-QGND 136
IHF+GIGG +S LA++ + +GF V+GSD S L GA + G NI +G D
Sbjct: 12 IHFIGIGGISMSGLAEILIDEGFTVTGSDSHESELTRHLEAKGAAIAYGQRAENIKEGID 71
Query: 137 GSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKSTT 195
VV ++A+ DN E AK G+PI R L ++ + Y N IAVSG+HGK+TT
Sbjct: 72 ------VVVYTAAVHPDNPEYAEAKEKGLPILSRAELLGQMMKNYENSIAVSGTHGKTTT 125
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+ +L A D T VG + G+I GG FV EA EY FL P++ V+
Sbjct: 126 TSMITEILLAAEADPTISVGGILNSI-GGNIRVGGPGLFVTEACEYTNSFLSFFPTMEVI 184
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
N++ +H+D F+D ++ FR F +++ G LVI D + +
Sbjct: 185 LNIEADHLDFFKDIKDIRHSFRLFAEKLPPNGSLVINNDIESREEIT------------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQ 375
+G ++ITYG + + AE++ + + Y L G + ++L
Sbjct: 232 ------------EGLPCQVITYGKKPGSRYQAEAIRFDEYARATYDLKLDGNVVDTVTLG 279
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
+PG HNV NSLA A V T +G + +K L +F G +RRF+ G + G I
Sbjct: 280 VPGEHNVYNSLAA-AAVCTELGIE------FDLIKKGLKRFTGTNRRFEKKGELSGVTII 332
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHP E+RA L+ A+ +P+ L FQPHTY+R ++FA+ALS AD+V+++ +
Sbjct: 333 DDYAHHPQEIRATLETAKH-YPHNKLWVAFQPHTYTRTKAFLEEFADALSLADEVILADI 391
>gi|304389582|ref|ZP_07371544.1| UDP-N-acetylmuramate--L-alanine ligase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304327135|gb|EFL94371.1| UDP-N-acetylmuramate--L-alanine ligase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 499
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 152/453 (33%), Positives = 226/453 (49%), Gaps = 46/453 (10%)
Query: 50 KNSVSVLTNCTFKRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVW 109
K+S + L+N T +F + +GIGG+G+S LA L + G++VSGSD V
Sbjct: 5 KDSSTNLSNVTAAHEVPSDQEF-------YLIGIGGAGMSVLALLLHELGYQVSGSDQVP 57
Query: 110 SSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYK 169
+ + L EAG N+H+GH + N VV +SAI +DN E AK++G+ I+
Sbjct: 58 ADTLGQLREAGINVHVGHREEQVPAN------AIVVVTSAIHEDNPEAARAKALGLEIWH 111
Query: 170 RDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYG 229
R L T + L+AV+G+HGK++T+SM+A+ L +G D + +G + G+ G
Sbjct: 112 RSQALDFCTRSHELVAVAGAHGKTSTSSMMAHSLLDIGADPSFAIGGIIADLGTGARL-G 170
Query: 230 GGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHL 289
G FV+EADE DG FL SP+V V+TN++ +H+D + A + F F ++R GG L
Sbjct: 171 SGSAFVIEADESDGSFLNYSPAVEVITNIEPDHLDHWGSAAAFEQAFVNFTGRLRKGGAL 230
Query: 290 VICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSS--FNDWYA 347
V+C D + L +Q+ G ++I+YGF D
Sbjct: 231 VLCADDAGVKRLAEQVSA------------------RGDADGPRVISYGFGVPLAGDVVV 272
Query: 348 ESVCPNV---QGGSDYILCERGRPL--AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQS 402
+ P + +G + + G+ + Q++L+I G H +LN+ + L D Q
Sbjct: 273 QLHEPELGPGRGQCQVTITDAGQQVFHGQLNLRIGGKHMLLNAGGALGAAYVLGADLSQF 332
Query: 403 HESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALI 462
IA L+ F G RR +G G IYDD+ HHPTE+ A LQAAR L+
Sbjct: 333 ---IAALR----TFSGADRRMQPVGERDGVRIYDDYGHHPTEIAATLQAARDLAGKGRLL 385
Query: 463 AVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
FQPH YSR D FA + D + V AV
Sbjct: 386 VCFQPHLYSRTYHNVDAFARVFATVDDLTVCAV 418
>gi|402823980|ref|ZP_10873375.1| UDP-N-acetylmuramate--L-alanine ligase [Sphingomonas sp. LH128]
gi|402262520|gb|EJU12488.1| UDP-N-acetylmuramate--L-alanine ligase [Sphingomonas sp. LH128]
Length = 473
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 150/429 (34%), Positives = 231/429 (53%), Gaps = 49/429 (11%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G+ V GSD+ +EGL G + IGH+ N++G
Sbjct: 9 GTIHFVGIGGIGMSGIAEVMHNLGYSVQGSDIAEGYVVEGLRARGIKVMIGHAAENVEG- 67
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
VV S+A+ ++N E+++A +P+ +R LA+L N +AV+G+HGK+TT
Sbjct: 68 -----AAVVVTSTAVKRENPEVVYALEHRIPVVRRAEMLAELMRLKNTVAVAGTHGKTTT 122
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L A G D T I G + + + G V+EADE DG FL L ++A+V
Sbjct: 123 TSMVAALLDAGGVDPTVINGGIINSYGSNARL-GASDWMVVEADESDGSFLRLDGTIAIV 181
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D + D +K F F++ + G ++C D ++++ +++
Sbjct: 182 TNIDPEHLDHYGSFDRIKESFVEFIENVPFYGAAMLCIDHPEVQAIIPKVR--------- 232
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS--DYILCERG---RPLA 370
D +++TYGFS+ D E+V P + GG+ D L +R R +
Sbjct: 233 ---------------DRRVVTYGFSAQADIRGENVTP-IPGGNRFDVALRQRDGSFRRIE 276
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
I L +PG HNV N+LA + + + S AC++ SKF GV RRF +G +
Sbjct: 277 GIELPMPGRHNVQNALAAVGVAVEM-------GCSDACIQTGFSKFGGVKRRFTKVGEVE 329
Query: 431 ----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
+ DD+ HHP E+RAVL AAR+ N+ +IAV QPH ++RL +DF A ++
Sbjct: 330 LDGGSVTVIDDYGHHPVEIRAVLAAAREGVQNR-VIAVVQPHRFTRLRDHMEDFQGAFND 388
Query: 487 ADQVVVSAV 495
AD V + V
Sbjct: 389 ADVVYAAPV 397
>gi|359409998|ref|ZP_09202463.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium sp. DL-VIII]
gi|357168882|gb|EHI97056.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium sp. DL-VIII]
Length = 458
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 142/427 (33%), Positives = 233/427 (54%), Gaps = 47/427 (11%)
Query: 70 DF-KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
DF +++ IHF+GIGG +S LA + L GF+VSGSD SS ++ L +GA ++IGH+
Sbjct: 4 DFIEDKDKKIHFIGIGGISMSGLAAVLLNSGFKVSGSDFKDSSIIDKLRSSGAEIYIGHN 63
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAV 186
NI+ D VV ++AIP DN E+L AK + + R +L ++ + KYN +AV
Sbjct: 64 KDNIKNVD------LVVYTAAIPSDNPELLEAKEKNIKLMDRAEFLGQIMKGHKYN-VAV 116
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
+G+HGK+T SML+++ A D T +VG + + G+ G + F+ EA EY FL
Sbjct: 117 TGTHGKTTCTSMLSHITLAGDLDPTILVGGELDEIG-GNFKIGNSEYFITEACEYKRSFL 175
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLV-ICGDSQCARSLLDQI 305
P + ++ N+D +H+D ++D D + F +F K + G+LV GD + + +L++
Sbjct: 176 KFFPYIGIILNIDADHLDFYKDIDDITDTFSQFSKLVPSDGYLVGYAGDFR-VKEILEKA 234
Query: 306 KQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER 365
+T +TYGF D A+++ N G + + + +
Sbjct: 235 NCNT-------------------------MTYGFED-ADVTAKNIVFNNNGCATFDVYKD 268
Query: 366 GRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
+ L +SL +PG HN+LN+LA I ++LI + S+ + L+K G +RF+
Sbjct: 269 SKNLFTVSLNVPGKHNILNALASIC--VSLIFNISDSN-----IIAGLAKCKGAHKRFEY 321
Query: 426 IGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
G + G + DD+AHHPTE++A L A+Q NK +FQPHTY+R L ++F +
Sbjct: 322 KGEVNGVTVIDDYAHHPTEIKATLSTAKQIHHNKTY-CIFQPHTYTRTKALFNEFTECFN 380
Query: 486 EADQVVV 492
+ D++++
Sbjct: 381 DVDELIL 387
>gi|15837400|ref|NP_298088.1| UDP-N-acetylmuramate--L-alanine ligase [Xylella fastidiosa 9a5c]
gi|23821887|sp|Q9PF80.1|MURC_XYLFA RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|9105694|gb|AAF83608.1|AE003919_19 UDP-N-acetylmuramate--alanine ligase [Xylella fastidiosa 9a5c]
Length = 477
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 152/426 (35%), Positives = 224/426 (52%), Gaps = 50/426 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HFVGIGG+G++ +A++ L G+EVSGSD ++ L GA + GHS +N+ G D
Sbjct: 18 VHFVGIGGAGMTGIAEVMLTLGYEVSGSDNADNAATRRLATLGARVMRGHSAANVLGTD- 76
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSAI +DN E++ A+S +PI R LA+L + IAV+G+HGK+TT S
Sbjct: 77 -----CVVVSSAIREDNPELMEARSQRIPIMPRAAMLAELMRFRHGIAVAGTHGKTTTTS 131
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL G D T ++G + + G G+ V+EADE DG FL L+P VAVVTN
Sbjct: 132 LIAAVLSEGGLDPTFVIGGQL-LAAGANAKLGAGQWLVVEADESDGSFLRLNPLVAVVTN 190
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H++ + D +K F FL+++ G ++C D
Sbjct: 191 IDADHLENYGNDFSRIKDAFTEFLQRLPFYGLALLCLDDP-------------------- 230
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSD--YILCERGRPLAQISL 374
+ ++L G+ + ++TYG + D AE V VQ G+ + LC + ++L
Sbjct: 231 ----EVAELAGKARRH-VMTYGIDAAADVRAEDV---VQDGARMCFTLCLPEGKVIPVTL 282
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY---- 430
+PG HNVLN+LA A Q + L F+G+ RRF+ +G +
Sbjct: 283 ALPGRHNVLNALAASAV-------GWQLGVPPEVIGRALKSFVGIGRRFNDLGDVAIGNG 335
Query: 431 GC-HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
C + DD+ HHP E+ AV A R +P+K L+ FQPH YSR D FA LS D
Sbjct: 336 ACVRLIDDYGHHPRELEAVFAAVRGGWPDKRLVVAFQPHRYSRTRDQFDAFAAVLSSVDA 395
Query: 490 VVVSAV 495
+V+S V
Sbjct: 396 LVLSEV 401
>gi|189423738|ref|YP_001950915.1| UDP-N-acetylmuramate--L-alanine ligase [Geobacter lovleyi SZ]
gi|229620044|sp|B3E3Y1.1|MURC_GEOLS RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|189419997|gb|ACD94395.1| UDP-N-acetylmuramate/alanine ligase [Geobacter lovleyi SZ]
Length = 456
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 152/420 (36%), Positives = 219/420 (52%), Gaps = 43/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+S +A++ L G++VSGSDL S E L G + IGH+ N+ D
Sbjct: 8 IHFVGIGGIGMSGIAEVLLNLGYQVSGSDLRESDTTERLRSLGGEICIGHAAENLTNVD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV S+A+ DN E++ AK VP+ R LA+L IA++G+HGK+TT S
Sbjct: 67 -----VVVTSTAVQSDNPEVIEAKHRMVPVIPRAEMLAELMRMKYGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A VL G D T ++G + + G GK V EADE DG FL LSP++AVVTN
Sbjct: 122 MVATVLTHAGIDPTIVIGGKLNTLGSNAKL-GQGKFLVAEADESDGSFLTLSPTIAVVTN 180
Query: 258 LDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + + +K F F+ ++ G V+C + + ++ +IK+
Sbjct: 181 IDADHLDYYTGGLEQIKDTFVSFINKVPFYGLAVLCQEDRNINEIIPRIKK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPLAQISLQ 375
+ +TYG SS D A V + G + + +G L +IS
Sbjct: 232 ----------------RFMTYGLSSQADLRATHV--KLDGFQTTFTAHYKGYRLGEISFN 273
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
+PG HNVLN+LA A L L + E A +F GV RRF + G G +
Sbjct: 274 MPGAHNVLNALACTAVALELDVPFDKIQEGFA-------QFGGVGRRFTVKGEKNGIMVV 326
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+ HHP E+RA L AAR +P + L+ FQPH YSR L ++F +AD +V++ +
Sbjct: 327 DDYGHHPAEIRATLGAARNGWPERRLVVAFQPHRYSRTKELFNEFVTCFYDADVLVLTDI 386
>gi|402567704|ref|YP_006617049.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia cepacia GG4]
gi|402248901|gb|AFQ49355.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia cepacia GG4]
Length = 465
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 149/425 (35%), Positives = 217/425 (51%), Gaps = 48/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ + G+EVSGSDL ++ + L GA + IGH +NI+G
Sbjct: 8 IHFVGIGGAGMSGIAEVLVNLGYEVSGSDLSRNAVTDRLAALGARIAIGHDAANIEG--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
NAVV S+A+ DN E+L A+ VPI +R LA+L IA++G+HGK+TT S
Sbjct: 65 ---ANAVVVSTAVRSDNPEVLAARHQRVPIVQRAVMLAELMRLKQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL A G D T ++G + + G G V EADE D FL L P + V+TN
Sbjct: 122 LVASVLAAGGLDPTFVIGGRLIS-AGANARLGTGDFIVAEADESDASFLNLYPVIEVITN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D +K F F +++ G V+C D R ++ I +
Sbjct: 181 IDADHMDTYGHDFARLKQAFIEFTQRLPFYGSAVVCVDDPNVRQIIPFISK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++ YG S AE + G + + GR + L +
Sbjct: 232 ----------------PVVRYGLSPDAQVRAEDIDAR-DGRMHFTVIREGRAPLAVVLNM 274
Query: 377 PGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH-- 433
PG+HNV N+LA IA L + D ++L L++F GV RRF G +
Sbjct: 275 PGLHNVQNALAAIAIATDLGVTDD--------AIQLALAEFNGVGRRFQRYGEVPTADGG 326
Query: 434 ---IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP E+ A + AAR FP + L+ FQPH Y+R DDF N LS D +
Sbjct: 327 QYTLIDDYGHHPVEMAATIAAARGAFPGRRLVLAFQPHRYTRTRDCFDDFVNVLSTVDAL 386
Query: 491 VVSAV 495
V++ V
Sbjct: 387 VLTEV 391
>gi|395650343|ref|ZP_10438193.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas extremaustralis
14-3 substr. 14-3b]
Length = 486
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 153/424 (36%), Positives = 218/424 (51%), Gaps = 47/424 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G++VSGSDL S E L GA + IGH N +D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYQVSGSDLKESPVTERLKSFGARIFIGHRAENAADSD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 78 -----VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ ++ D + +K F FL + G V+C D R +L +K+ T
Sbjct: 192 IDEDHMATYDGDFNKLKKTFVEFLHNLPFYGLAVVCLDDPVVREILPLVKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER-GRPLAQISLQ 375
+TYGFS D A +V +G + R R +S+
Sbjct: 245 ------------------VTYGFSEDADVRAINV--RQEGMQTFFTVLRPDREPLDVSVN 284
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----G 431
+PG HNVLNSLA I + D+ S E+I LS+F GV RRF + G +
Sbjct: 285 MPGNHNVLNSLATIC----IASDEGVSDEAIVE---GLSRFAGVGRRFQVYGQLPVEGGD 337
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+ HHPTEV AV++A R +P + L+ V+QPH YSR L DDF N L++A+ ++
Sbjct: 338 VMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVNVLADANVLL 397
Query: 492 VSAV 495
+ V
Sbjct: 398 LMEV 401
>gi|389714695|ref|ZP_10187268.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter sp. HA]
gi|388609671|gb|EIM38818.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter sp. HA]
Length = 482
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 143/429 (33%), Positives = 218/429 (50%), Gaps = 49/429 (11%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG+G+ +A++ QG++VSGSD+ S L E G ++IGH+ NIQ
Sbjct: 21 RIKHIHFVGIGGAGMCGIAEVLKNQGYKVSGSDIKASKTTAQLEENGIKVYIGHAAENIQ 80
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
G N +V S+AI +N EI A +P+ +R L +L + IAV+G+HGK+
Sbjct: 81 G------ANVIVVSTAIDPENPEIKTAIEKRIPVVRRAEMLGELMRYRHGIAVAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S++ +L D T ++G + + + G + V EADE D FL L P
Sbjct: 135 TTTSLVTCMLAEENLDPTYVIGGLLNRTGVNAAL-GASRYIVAEADESDASFLHLQPMAT 193
Query: 254 VVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
+VTN+D +H+D + D +K F +FL+++ G V+CGD R ++ +I +
Sbjct: 194 IVTNIDADHMDTYGGSFDVLKDTFVQFLQKLPFYGLAVVCGDDANIREIMPRIGR----- 248
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLA 370
++TYGF+ ND A + Q G S + + + R
Sbjct: 249 --------------------PLLTYGFNEDNDIRAVDIK---QDGMQSHFTVLRKDREPL 285
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
++++ +PG HN+LNSLA IG S A + L F GV RRF + G
Sbjct: 286 RVTINMPGAHNILNSLAA-------IGIATDEGVSDAAICRALESFSGVGRRFQVQGQFE 338
Query: 431 ----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
+ DD+ HHP EV A ++AAR P++ L+ +FQPH +SR +DF + LS
Sbjct: 339 LEGGDVKLVDDYGHHPKEVEATIKAARASHPDRRLVMMFQPHRFSRTRDCFEDFVDVLST 398
Query: 487 ADQVVVSAV 495
DQ+++ V
Sbjct: 399 VDQLLLLEV 407
>gi|398876090|ref|ZP_10631250.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM67]
gi|398205382|gb|EJM92166.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM67]
Length = 486
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 154/428 (35%), Positives = 217/428 (50%), Gaps = 47/428 (10%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG G+ +A++ L G+EVSGSDL S E L GA + IGH N
Sbjct: 15 RIRRIHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKASPVTERLESFGAQIFIGHRAENAA 74
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
D +V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+
Sbjct: 75 AAD------VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKT 128
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S++A V A G D T ++G + + G + + EADE D FL L P VA
Sbjct: 129 TTTSLIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVA 187
Query: 254 VVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
VVTN+D +H+ ++ D + +K F FL + G V+C D R +L Q+K+
Sbjct: 188 VVTNIDADHMATYDGDFNKLKKTFVEFLHNLPFYGLAVVCLDDPVVREILPQVKR----- 242
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER-GRPLAQ 371
++TYGF D A +V QG + R R
Sbjct: 243 --------------------PVVTYGFGDDCDVRAINV--RQQGMQTFFTVLRPDREPLD 280
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY- 430
+S+ +PG HNVLN+LA I + D+ S E+I LS F GV RRF + G +
Sbjct: 281 VSVNMPGNHNVLNALATIC----IATDEGVSDEAIV---QGLSGFQGVGRRFQVYGELPV 333
Query: 431 ---GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ DD+ HHPTEV AV++A R +P + L+ V+QPH YSR L DDF N L++A
Sbjct: 334 EDGSVMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVNVLADA 393
Query: 488 DQVVVSAV 495
+ +++ V
Sbjct: 394 NVLLLMEV 401
>gi|107021639|ref|YP_619966.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia cenocepacia AU
1054]
gi|116688584|ref|YP_834207.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia cenocepacia
HI2424]
gi|123371911|sp|Q1BZG2.1|MURC_BURCA RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|166222962|sp|A0K487.1|MURC_BURCH RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|105891828|gb|ABF74993.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia cenocepacia AU
1054]
gi|116646673|gb|ABK07314.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia cenocepacia
HI2424]
Length = 465
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 149/425 (35%), Positives = 217/425 (51%), Gaps = 48/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ + G+ VSGSDL ++ + L GA + IGH +NI+G
Sbjct: 8 IHFVGIGGAGMSGIAEVLVNLGYAVSGSDLSRNAVTDRLEALGARIAIGHDAANIEG--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
NAVV S+A+ DN E+L A+ GVPI +R LA+L IA++G+HGK+TT S
Sbjct: 65 ---ANAVVVSTAVRSDNPEVLAARHQGVPIVQRAVMLAELMRLKQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL A G D T ++G + + G G V EADE D FL L P + V+TN
Sbjct: 122 LVASVLAAGGLDPTFVIGGRLIS-AGANARLGTGDFIVAEADESDASFLNLYPVIEVITN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D +K F F +++ G V+C D R ++ I +
Sbjct: 181 IDADHMDTYGHDFARLKQAFIEFTQRLPFYGSAVVCVDDPNVRQIIPFISK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++ YG S AE + G + + GR + L +
Sbjct: 232 ----------------PVVRYGLSPDAQVRAEDIDAR-DGRMHFTVIREGRAPLAVVLNM 274
Query: 377 PGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH-- 433
PG+HNV N+LA IA L + D ++L L++F GV RRF G +
Sbjct: 275 PGLHNVQNALAAIAIATDLGVSDD--------AIQLALAEFNGVGRRFQRYGEVPSADGG 326
Query: 434 ---IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP E+ A + AAR FP + L+ FQPH Y+R DDF N LS D +
Sbjct: 327 QYTLIDDYGHHPVEMAATIAAARGAFPGRRLVLAFQPHRYTRTRDCFDDFVNVLSTVDAL 386
Query: 491 VVSAV 495
V++ V
Sbjct: 387 VLTEV 391
>gi|210623279|ref|ZP_03293696.1| hypothetical protein CLOHIR_01646 [Clostridium hiranonis DSM 13275]
gi|210153680|gb|EEA84686.1| hypothetical protein CLOHIR_01646 [Clostridium hiranonis DSM 13275]
Length = 455
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 138/419 (32%), Positives = 218/419 (52%), Gaps = 40/419 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG +SALA++ L +G+ VSGSD S E L GA + IG NI +
Sbjct: 3 IHFIGIGGISMSALAEICLNKGYHVSGSDSQESPMTEKLRNQGAEIFIGQRKENISDD-- 60
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKSTTA 196
N VV ++AI DN E++ A+ I R +L ++ +Y N IAVSG+HGK++T
Sbjct: 61 ---VNMVVYTAAIHPDNEELMAARKKNKLIVNRAAFLGQIMREYKNSIAVSGTHGKTSTT 117
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SML+ + + D T +VG ++ G++ G +F+ EA EY FL +P +++V
Sbjct: 118 SMLSAIFEYADLDPTILVGGNLSMIG-GNVKIGHSNHFITEACEYVDSFLNFNPKISIVL 176
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F D +K+ F +F K + G+ +I GD + +L +K
Sbjct: 177 NIEEDHLDYFSGIDEIKASFNKFGKLLPPDGYFIINGDDENTADILYDVKA--------- 227
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+I YG + ND +++ + G + L G L + L +
Sbjct: 228 ----------------TVIKYGSNKDNDAVIKNIEFDELGCGIFDLVYNGEDLGKFELSV 271
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
G+HN+ N++A I T + S + +K + K+ GV RRF+ G G I D
Sbjct: 272 RGLHNIYNAVAAIITSIV-------SGIDVETIKRNIKKYRGVGRRFEFKGKYNGATIVD 324
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHPTE+++ L A+ R L +FQPHTYSR L ++F++A AD+V+V+ +
Sbjct: 325 DYAHHPTELKSTLSTAK-RIKKNRLWCIFQPHTYSRTKSLLNEFSDAFFAADKVIVTDI 382
>gi|170731884|ref|YP_001763831.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia cenocepacia
MC0-3]
gi|229486474|sp|B1JV79.1|MURC_BURCC RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|169815126|gb|ACA89709.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia cenocepacia
MC0-3]
Length = 465
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 149/425 (35%), Positives = 217/425 (51%), Gaps = 48/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ + G+ VSGSDL ++ + L GA + IGH +NI+G
Sbjct: 8 IHFVGIGGAGMSGIAEVLVNLGYAVSGSDLSRNAVTDRLEALGARIAIGHDAANIEG--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
NAVV S+A+ DN E+L A+ GVPI +R LA+L IA++G+HGK+TT S
Sbjct: 65 ---ANAVVVSTAVRSDNPEVLAARHQGVPIVQRAVMLAELMRLKQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL A G D T ++G + + G G V EADE D FL L P + V+TN
Sbjct: 122 LVASVLAAGGLDPTFVIGGRLIS-AGANARLGTGDFIVAEADESDASFLNLYPVIEVITN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D +K F F +++ G V+C D R ++ I +
Sbjct: 181 IDADHMDTYGHDFARLKQAFIEFTQRLPFYGSAVVCVDDPNVRQIIPFISK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++ YG S AE + G + + GR + L +
Sbjct: 232 ----------------PVVRYGLSPDAQVRAEDIDAR-DGRMHFTVIREGRAPLAVVLNM 274
Query: 377 PGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH-- 433
PG+HNV N+LA IA L + D ++L L++F GV RRF G +
Sbjct: 275 PGLHNVQNALAAIAIATDLGVSDD--------AIQLALAEFNGVGRRFQRYGDVPSADGG 326
Query: 434 ---IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP E+ A + AAR FP + L+ FQPH Y+R DDF N LS D +
Sbjct: 327 QYTLIDDYGHHPVEMAATIAAARGAFPGRRLVLAFQPHRYTRTRDCFDDFVNVLSTVDAL 386
Query: 491 VVSAV 495
V++ V
Sbjct: 387 VLTEV 391
>gi|376254683|ref|YP_005143142.1| UDP-N-acetylmuramate--L-alanine ligase [Corynebacterium diphtheriae
PW8]
gi|376290794|ref|YP_005163041.1| UDP-N-acetylmuramate--L-alanine ligase [Corynebacterium diphtheriae
C7 (beta)]
gi|372104190|gb|AEX67787.1| UDP-N-acetylmuramate-L-alanine ligase [Corynebacterium diphtheriae
C7 (beta)]
gi|372117767|gb|AEX70237.1| UDP-N-acetylmuramate-L-alanine ligase [Corynebacterium diphtheriae
PW8]
Length = 477
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 139/426 (32%), Positives = 218/426 (51%), Gaps = 41/426 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSN--IQGN 135
+H +GIGG+G+S +A++ L +G VSGSD+ S + L GA + +GH N I G
Sbjct: 9 VHMIGIGGAGMSGVARILLSRGSVVSGSDVKESRPVAALRAMGATIAVGHKAENLAISGT 68
Query: 136 DGSRFPNAVVAS-SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKST 194
P VV S +AIPQDN E+ A + +P+ +R L +L E + + ++G+HGK++
Sbjct: 69 ----MPTVVVTSFAAIPQDNPELQEAHANNIPVIRRSDLLGELMEDHQQVLIAGTHGKTS 124
Query: 195 TASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAV 254
T SM +A G D + +G + + + G GK FV EADE D L P +AV
Sbjct: 125 TTSMAVVAFQAAGKDPSFAIGGQLNKAGTNA-HDGTGKAFVAEADESDASLLRYKPDIAV 183
Query: 255 VTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYS 314
VTN++ +H+D F+ +A +F F ++++ GG LV+C D A +L ++ K ++
Sbjct: 184 VTNIEPDHLDFFKTSEAYFKVFDDFAERVQPGGTLVVCLDDPHAAALGEKFKDRMTVRGY 243
Query: 315 GGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISL 374
G + + Q + + + + + G D + + +
Sbjct: 244 GSLDAAQQ---------HPDVAFTVVEHTEVGPAGTSARITVGDDTV---------DVIM 285
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG--- 431
+IPG H VLN+ A + +T + + L +S F GV RRF+ G + G
Sbjct: 286 RIPGHHMVLNACAALTAGVT-------AGAELERLAAGISDFSGVRRRFEFHGRVSGGAF 338
Query: 432 --CHIYDDFAHHPTEVRAVLQAARQRFPNKAL---IAVFQPHTYSRLVVLKDDFANALSE 486
+YDD+AHHPTEV AVL+AARQ+ + + + FQPH YSR + +FA ALS
Sbjct: 339 HDAEVYDDYAHHPTEVTAVLKAARQQQEARGIGRVVVAFQPHLYSRTMEFAAEFAEALSL 398
Query: 487 ADQVVV 492
AD V+
Sbjct: 399 ADHAVI 404
>gi|398866247|ref|ZP_10621747.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM78]
gi|398241584|gb|EJN27234.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM78]
Length = 486
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 154/424 (36%), Positives = 216/424 (50%), Gaps = 47/424 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G+EVSGSDL S E L GA + IGH N D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKASPVTERLESFGAQIFIGHRAENAAAAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 78 -----VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ ++ D + +K F FL + G V+C D R +L Q+K+ T
Sbjct: 192 IDADHMATYDGDFNKLKKTFVEFLHNLPFYGLAVMCLDDPVVREILPQVKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER-GRPLAQISLQ 375
+TYGF D A +V QG + R R +S+
Sbjct: 245 ------------------VTYGFGEDCDVRAINV--RQQGMQTFFTVLRPDREPLDVSVN 284
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----G 431
+PG HNVLN+LA I + D+ S E+I LS F GV RRF + G +
Sbjct: 285 MPGNHNVLNALATIC----IATDEGVSDEAIV---QGLSGFQGVGRRFQVYGELPVDGGQ 337
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+ HHPTEV AV++A R +P + L+ V+QPH YSR L DDF N L++A+ ++
Sbjct: 338 VMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVNVLADANVLL 397
Query: 492 VSAV 495
+ V
Sbjct: 398 LMEV 401
>gi|302876612|ref|YP_003845245.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium cellulovorans
743B]
gi|307687286|ref|ZP_07629732.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium cellulovorans
743B]
gi|302579469|gb|ADL53481.1| UDP-N-acetylmuramate/alanine ligase [Clostridium cellulovorans
743B]
Length = 461
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 137/423 (32%), Positives = 227/423 (53%), Gaps = 41/423 (9%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R +HF+GIGG +S LA++ L + +VSGSD+ SS E L E G + IGHS SNI
Sbjct: 10 RNDKVHFIGIGGVSMSGLAEILLTKNIKVSGSDMKDSSITEHLRELGVEISIGHSPSNI- 68
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGK 192
S + +V ++AI +DN E++ A + +P++ R +L ++ + Y + IAVSG+HGK
Sbjct: 69 ----SEDVSVIVYTAAIAKDNPELVSANNRNLPMFTRAEFLGEIMKDYKHNIAVSGTHGK 124
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+TT SM++++L D T +VG + +G + G F+ EA EY G FL P++
Sbjct: 125 TTTTSMVSHILLKGEKDPTILVGGSL-DIINGYVRTGKSDYFLTEACEYKGSFLSFYPTI 183
Query: 253 AVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
++ N+D +H+D ++D D ++ F++F I G+L++ + + A ++ +T
Sbjct: 184 GIILNIDADHLDYYKDIDEIEEAFQKFAYLIPRDGYLIVNNEDERAVNVAKNSNCNT--- 240
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQI 372
IT+G + D A++V N G + + +G +
Sbjct: 241 ----------------------ITFGIDN-GDIIAKNVTFNSLGHGSFDMFYKGCEYFHV 277
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC 432
+L++PG HNVLNSL+ +A + +H +K + F G RRF+ GT+
Sbjct: 278 TLKVPGRHNVLNSLSAMAAAIA--SGIEPNH-----IKAGIESFGGTHRRFEFKGTVDDI 330
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+ DD+AHHPTE++A L+A + N+ LI VFQPHTY+R L DF+ ++V+
Sbjct: 331 TVIDDYAHHPTEIKATLEACKNVSHNR-LICVFQPHTYTRTYSLFKDFSECFGGITKLVL 389
Query: 493 SAV 495
+ +
Sbjct: 390 ADI 392
>gi|172059550|ref|YP_001807202.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia ambifaria
MC40-6]
gi|229486473|sp|B1YSS5.1|MURC_BURA4 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|171992067|gb|ACB62986.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia ambifaria
MC40-6]
Length = 465
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 149/426 (34%), Positives = 216/426 (50%), Gaps = 48/426 (11%)
Query: 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGND 136
IHFVGIGG+G+S +A++ + G+EVSGSDL ++ + L GA + IGH +NI G
Sbjct: 7 QIHFVGIGGAGMSGIAEVLVNLGYEVSGSDLSRNAVTDRLEALGARIAIGHDAANIAG-- 64
Query: 137 GSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
NAVV S+A+ DN E+L A+ GVPI +R LA+L IA++G+HGK+TT
Sbjct: 65 ----ANAVVVSTAVRSDNPEVLAARHQGVPIVQRAVMLAELMRLKQGIAIAGTHGKTTTT 120
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
S++A VL A G D T ++G + + G G V EADE D FL L P + V+T
Sbjct: 121 SLVASVLAAGGLDPTFVIGGRLIS-AGANARLGTGDFIVAEADESDASFLNLYPVIEVIT 179
Query: 257 NLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
N+D +H+D + D +K F F +++ G V+C D R ++ I +
Sbjct: 180 NIDADHMDTYGHDFARLKQAFIEFTQRLPFYGSAVVCVDDPNVRQIIPFISK-------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQ 375
++ YG S AE + G + + GR + L
Sbjct: 232 -----------------PVVRYGLSPDAQVRAEDIDAR-DGRMHFTVIREGRAPLAVVLN 273
Query: 376 IPGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH- 433
+PG+HNV N+LA IA L + D ++ L++F GV RRF G +
Sbjct: 274 LPGLHNVQNALAAIAIATDLGVSDD--------AIQQALAEFNGVGRRFQRYGEVPSADG 325
Query: 434 ----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
+ DD+ HHP E+ A + AAR FP + L+ FQPH Y+R DDF N LS D
Sbjct: 326 GQYTLIDDYGHHPVEMAATVAAARGAFPGRRLVLAFQPHRYTRTRDCFDDFVNVLSTVDA 385
Query: 490 VVVSAV 495
+V++ V
Sbjct: 386 LVLTEV 391
>gi|403724532|ref|ZP_10946063.1| UDP-N-acetylmuramate--L-alanine ligase [Gordonia rhizosphera NBRC
16068]
gi|403205531|dbj|GAB90394.1| UDP-N-acetylmuramate--L-alanine ligase [Gordonia rhizosphera NBRC
16068]
Length = 508
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 154/435 (35%), Positives = 224/435 (51%), Gaps = 47/435 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H VGIGG+G+S LA++ L +G +VSGSD S + L GA + +GHS + + G
Sbjct: 19 VHMVGIGGAGMSGLARILLARGGQVSGSDAKSSRGVLALRTRGARIQVGHSPAALDQLPG 78
Query: 138 SRFPNAVVAS-SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
P+ VV + +AIP+ N E++ A+ G+PI R + LA L Y + V+G+HGK++T
Sbjct: 79 G--PSVVVTTYAAIPKTNPELVEARERGIPILLRPHVLADLMAGYRTLLVAGTHGKTSTT 136
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
S+ L+ G D + VG + + + +G G FV EADE DG L SP V V+T
Sbjct: 137 SIAVVALQHCGLDPSFAVGGELNESGTNA-HHGTGAVFVAEADESDGSLLEYSPDVVVIT 195
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ---DTGLKY 313
N++ +H+D F +A +F +F IR GG L++C D + A +L ++ G+
Sbjct: 196 NIEVDHLDFFGTREAYVEVFDKFADLIRPGGSLIVCLDDEGAAALAGRVAPMLVQRGISV 255
Query: 314 SGGVVSNQSSDLWGQGHDYKIITYG---FSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
G +G+GH Y + G ++ W A GG I + P+
Sbjct: 256 FG----------YGEGH-YAQLAPGATQVATLLSWEARGA-----GGIARIRLD--EPII 297
Query: 371 QIS------LQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFD 424
S L +PG H LN+L I + G+ + + F GV RRF+
Sbjct: 298 GASVERTLHLTLPGRHMALNALGAIVACIRAGGELDGVIDGV-------QTFGGVHRRFE 350
Query: 425 LIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKA------LIAVFQPHTYSRLVVLKD 478
G ++DD+AHHPTEVRAVL AARQ + A +IAVFQPH YSR D
Sbjct: 351 FRGRAGDVDVFDDYAHHPTEVRAVLTAARQAVASVAAEGTGRVIAVFQPHLYSRTQEFAD 410
Query: 479 DFANALSEADQVVVS 493
+FA AL AD+VVV+
Sbjct: 411 EFAAALDLADRVVVA 425
>gi|255524030|ref|ZP_05390992.1| UDP-N-acetylmuramate/alanine ligase [Clostridium carboxidivorans
P7]
gi|296186887|ref|ZP_06855288.1| UDP-N-acetylmuramate--alanine ligase [Clostridium carboxidivorans
P7]
gi|255512317|gb|EET88595.1| UDP-N-acetylmuramate/alanine ligase [Clostridium carboxidivorans
P7]
gi|296048601|gb|EFG88034.1| UDP-N-acetylmuramate--alanine ligase [Clostridium carboxidivorans
P7]
Length = 458
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 137/429 (31%), Positives = 234/429 (54%), Gaps = 44/429 (10%)
Query: 70 DF-KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
DF K++ I+F+GIGG +S LA++ L++ F+V+GSD+ S L+ GA ++IG
Sbjct: 4 DFIKDKDKKIYFIGIGGISMSGLAEILLEKNFKVAGSDIKTSPVTNKLVSNGALINIGQV 63
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAV 186
NI S + VV ++A+ +DN E+L AK + +PI R +L L + K+N +A+
Sbjct: 64 EENI-----SEDIDLVVYTAAVSKDNPELLKAKELNIPIMSRAEFLGHLMKGHKFN-VAI 117
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
+G+HGK+TT SM++++ D T +VG + +G++ G + F+ EA EY G FL
Sbjct: 118 AGTHGKTTTTSMVSHIFLNANLDPTILVGGQLDAI-NGNVRTGNSEYFLTEACEYKGSFL 176
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 306
P + V+ N+D +H+D ++D D +++ F +F K I G+L+ G+
Sbjct: 177 KFFPYIGVILNIDADHLDFYKDIDDIQNAFIKFAKLIPKNGYLICYGEDP---------- 226
Query: 307 QDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERG 366
G V+S + + ++TYG ++ N A+++ + +G + + +
Sbjct: 227 ------RMGKVISECNCN---------VLTYGLTNGN-VVAKNMKFDEKGCASFDVYAAN 270
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
+ + L +PG HN+LN+LA I L+L + L F G RRF++
Sbjct: 271 EMITSVKLNVPGKHNILNALASICVSLSL-------DIPTNLISKGLESFKGTHRRFEIK 323
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G G + DD+AHHPTE++A L AA+ +P+ + VFQPHTYSR + L +F A +
Sbjct: 324 GVKNGITVVDDYAHHPTEIKATLSAAKN-YPHNKIFCVFQPHTYSRTLNLFKEFTEAFGD 382
Query: 487 ADQVVVSAV 495
AD+++++ +
Sbjct: 383 ADELILADI 391
>gi|237799292|ref|ZP_04587753.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331022148|gb|EGI02205.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 486
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 154/429 (35%), Positives = 219/429 (51%), Gaps = 49/429 (11%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG G+ +A++ L G+EVSGSDL S + L GA + +GH N
Sbjct: 15 RIRRIHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKSSPVTDRLESFGAQIFVGHRAENTV 74
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
G D +V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+
Sbjct: 75 GAD------VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKT 128
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S++A V A G D T ++G + + G + + EADE D FL L P VA
Sbjct: 129 TTTSLIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVA 187
Query: 254 VVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
VVTN+D +H+ +E D + +K F FL + G V+C D R +L +K+ T
Sbjct: 188 VVTNIDADHMATYEGDFNKLKKTFVEFLHNLPFYGLAVMCIDDPVVREILPMVKRPT--- 244
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLA 370
+TYGFS D A +V Q G + + + R R
Sbjct: 245 ----------------------LTYGFSESADIRAINVR---QDGMLTFFTVLRRDREPL 279
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+S+ +PG HNVLNSLA IA + D+ S E+I LS F GV RRF + G +
Sbjct: 280 DVSVNMPGNHNVLNSLATIA----IATDEGVSDEAIVQ---GLSGFQGVGRRFQVYGELP 332
Query: 431 ----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
+ DD+ HHP EV AV+ A R +P++ L+ V+QPH +SR L DDF L++
Sbjct: 333 VDGGNVMLVDDYGHHPREVAAVINAVRGGWPDRRLVMVYQPHRFSRTRDLYDDFVQVLAD 392
Query: 487 ADQVVVSAV 495
A+ +++ V
Sbjct: 393 ANVLLLMEV 401
>gi|240950384|ref|ZP_04754647.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus minor NM305]
gi|240295098|gb|EER45930.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus minor NM305]
Length = 475
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 149/475 (31%), Positives = 239/475 (50%), Gaps = 72/475 (15%)
Query: 60 TFKRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEA 119
F+ + +V R IHF+GIGG+G+S +A++ L +G+++SGSD+ + + L +A
Sbjct: 3 NFQDKVKKLVPEMRRVNQIHFIGIGGAGMSGIAEVLLNEGYQISGSDITDGAVTQRLAKA 62
Query: 120 GANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE 179
GA + IGH NI+G + VVASSAI + N E+ AK +P+ +R LA++
Sbjct: 63 GAKVFIGHQAENIEG------ASVVVASSAIDESNPEVAAAKEARIPVIQRAQMLAEIMR 116
Query: 180 KYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN------ 233
+ IA++G+HGK+TT +M++ + G D P F +G + GKN
Sbjct: 117 FRHGIAIAGTHGKTTTTAMISMIYTEAGLD---------PTFVNGGLVKSAGKNAHLGAS 167
Query: 234 --FVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLV 290
+ EADE D FL L P V+VVTN++ +H+D + D + +K + RFL+ + G V
Sbjct: 168 RYLIAEADESDASFLHLQPMVSVVTNIEPDHMDTYGGDFEKMKETYVRFLRNLPFYGLAV 227
Query: 291 ICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESV 350
+C D + + ++ + ++I+YGFS D+ E
Sbjct: 228 MCADDETVMEIAPKVGR-------------------------QVISYGFSEKADYRIEDY 262
Query: 351 CPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIA--C 408
G ++C G + ++ L +PG HN LN+ A +A E IA
Sbjct: 263 QQTGFQGHYTVVCPTGERI-EVLLNVPGRHNALNATAALAVA---------KEEGIANEA 312
Query: 409 LKLPLSKFMGVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAV 464
+ L+ F G RRFD +G+ + + DD+ HHPTEV ++AARQ + NK ++ V
Sbjct: 313 ILAALADFQGAGRRFDQLGSFIRPNGKVMLVDDYGHHPTEVDVTIKAARQGWENKRVVMV 372
Query: 465 FQPHTYSRLVVLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
FQPH YSR L DDF LS+ D +++ L ++A ++ A + +C
Sbjct: 373 FQPHRYSRTRDLFDDFVQVLSQVDALIM-------LNVYAAGEAPIVGAESKDLC 420
>gi|70732383|ref|YP_262139.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas protegens Pf-5]
gi|109892722|sp|Q4K6J4.1|MURC_PSEF5 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|68346682|gb|AAY94288.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas protegens Pf-5]
Length = 484
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 154/428 (35%), Positives = 218/428 (50%), Gaps = 47/428 (10%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG G+ +A++ L G++VSGSDL S E L GA + IGH N
Sbjct: 15 RIRRIHFVGIGGVGMCGIAEVLLNLGYQVSGSDLKASPVTERLESFGAQIFIGHRAENAA 74
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
D +V SSA+ N E+ A +P+ R LA+L + +AV+G+HGK+
Sbjct: 75 NAD------VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGVAVAGTHGKT 128
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S+LA V A G D T ++G + + G + + EADE D FL L P VA
Sbjct: 129 TTTSLLASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVA 187
Query: 254 VVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
VVTN+D +H+ ++ D + +K F FL + G V+C D R +L Q+K+ T
Sbjct: 188 VVTNIDADHMATYDGDFNKLKKTFVDFLHNLPFYGLAVMCLDDPVVREILPQVKRPT--- 244
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYI-LCERGRPLAQ 371
+TYGFS D A +V QG + + R R
Sbjct: 245 ----------------------VTYGFSEEADVRAINV--RQQGMQTFFTVLRRDREPLD 280
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY- 430
+S+ +PG HNVLNSLA I + D+ S E+I LS F GV RRF + G +
Sbjct: 281 VSVNMPGNHNVLNSLATIC----IATDEGISDEAIVQ---GLSGFQGVGRRFQVYGELPV 333
Query: 431 ---GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ DD+ HHPTEV AV++A R +P + L+ V+QPH +SR L DDF L++A
Sbjct: 334 EGGNVMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRFSRTRDLYDDFVQVLADA 393
Query: 488 DQVVVSAV 495
+ +++ V
Sbjct: 394 NVLLLMEV 401
>gi|153006723|ref|YP_001381048.1| UDP-N-acetylmuramate--L-alanine ligase [Anaeromyxobacter sp.
Fw109-5]
gi|166222952|sp|A7HH68.1|MURC_ANADF RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|152030296|gb|ABS28064.1| UDP-N-acetylmuramate--alanine ligase [Anaeromyxobacter sp. Fw109-5]
Length = 458
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 154/470 (32%), Positives = 248/470 (52%), Gaps = 44/470 (9%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
F++R IHFVGIGG G+S +A++ L G+ VSGSDL S L G + GH+
Sbjct: 4 FRSRPAKIHFVGIGGIGMSGIAEVLLNLGYAVSGSDLKESEITRRLASLGGRVQRGHAAQ 63
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
+++ D VV SSA+ +DN E++ A+ +PI R LA+L +A++GSH
Sbjct: 64 HVEQVD------VVVTSSAVRKDNPEVVEARRRKIPIIPRAEMLAELMRLKYGVAIAGSH 117
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S+ A++L G D TA+VG V F + G G V+EADE DG FL + P
Sbjct: 118 GKTTTTSLAAHLLAHAGLDPTAVVGGKVNTFGSNAKL-GRGDYMVVEADESDGSFLHIPP 176
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
++A+VTN+D EH+D ++ E+A++ F F+ ++ G ++C D +SLL +++
Sbjct: 177 TIAIVTNIDPEHLDHWKTEEALRKGFLDFVNRVPFYGRAILCIDHPTVQSLLPEVES--- 233
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS-DYILCERGRPL 369
+ +TYG S D+ A+ + V G + + R PL
Sbjct: 234 ----------------------RYVTYGESHQADYRADGI--EVSGHAVRFDAFRRDEPL 269
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
+ +++ G HN LN+LAV+A I D+ + + L+ F GV RRF + G
Sbjct: 270 GRFEVRLVGRHNALNALAVVA-----IADEMGVPADVT--REALASFGGVQRRFTVRGEA 322
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
G + DD+ HHP EV+A L AR+ F ++ ++ +FQPH Y+R L +FA A ++AD
Sbjct: 323 GGVTVVDDYGHHPAEVKATLLGAREAF-HRRVVCLFQPHRYTRTRDLLPEFATAFNDADV 381
Query: 490 VVVSAVLVF-WLIIFAVSSFWLIMAINSVICIVRSMLPEKQMIGISMERI 538
++++ + I +S L AI + S++P ++ + +R+
Sbjct: 382 LLLTDIYAAGEEPIPGATSEALAEAIRACGHRDVSLVPRPELARAARQRV 431
>gi|74316138|ref|YP_313878.1| UDP-N-acetylmuramate--L-alanine ligase [Thiobacillus denitrificans
ATCC 25259]
gi|109892754|sp|Q3SMH2.1|MURC_THIDA RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|74055633|gb|AAZ96073.1| UDP-N-acetylmuramate--alanine ligase [Thiobacillus denitrificans
ATCC 25259]
Length = 463
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 155/427 (36%), Positives = 225/427 (52%), Gaps = 52/427 (12%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG G+S +A++ L G+ VSGSDL ++ + L + GA +H GH+ SNI G D
Sbjct: 8 IHFIGIGGVGMSGIAEVLLNLGYAVSGSDLADNAVTQRLAKLGARIHRGHAPSNIAGAD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
AVV S+A+ + N E++ A+ +PI R LA+L IA++G+HGK+TT S
Sbjct: 67 -----AVVTSTAVQESNPEVVAAREKKIPIVPRALMLAELMRLRQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A +L G D T ++G + + G G V EADE D FL L+P +A+VTN
Sbjct: 122 LVASILGEAGMDPTYVIGGKLTAAGTNARL-GQGDFLVAEADESDASFLYLTPVIAIVTN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D D +K+ F F +++ G V+C D R +L +I +
Sbjct: 181 IDADHMDTYGHDFDRLKTAFVDFCQRLPFYGMAVLCIDDANVREILPRITK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQ---GGSDYILCERGRPLAQIS 373
I TYGF D A+ + + G + + G ++
Sbjct: 232 ----------------PITTYGF----DPAAQVRAVDTRFEHGQMRFTVKREGMADLDVT 271
Query: 374 LQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY--- 430
L PG+HNVLN+LA IA V T +G S A + L++F GV RRF G
Sbjct: 272 LNQPGLHNVLNALAAIA-VATEVG------ASDAAIVKALAEFHGVGRRFQRYGEHPTKD 324
Query: 431 -GCH-IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
GC+ + DD+ HHP E+ A L AAR FP + L+ VFQPH YSR +DF LSE D
Sbjct: 325 GGCYWLIDDYGHHPVEMAATLAAARGAFPGRRLVLVFQPHRYSRTRDCFEDFVKVLSETD 384
Query: 489 QVVVSAV 495
+V++ V
Sbjct: 385 ALVLTEV 391
>gi|358061567|ref|ZP_09148221.1| UDP-N-acetylmuramate-L-alanine ligase [Clostridium hathewayi
WAL-18680]
gi|356700326|gb|EHI61832.1| UDP-N-acetylmuramate-L-alanine ligase [Clostridium hathewayi
WAL-18680]
Length = 459
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 143/428 (33%), Positives = 223/428 (52%), Gaps = 41/428 (9%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DF N+ IHF+GIGG +S LA++ +++GF VSGSD S E L GA + G
Sbjct: 4 IDF-NKPEAIHFIGIGGISMSGLAEILMEEGFRVSGSDSQKSELTEQLEARGAKVFYGQR 62
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVS 187
SNI+ DG + V ++A+ DN E + + G+P+ R L ++ + Y + ++
Sbjct: 63 ASNIE--DGI---DVAVYTAAVHPDNPEFMAVQEKGIPMLTRAELLGQIMKNYKYAVGIA 117
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT SM+ +L A D T VG + G+I G + FV EA EY FL
Sbjct: 118 GTHGKTTTTSMVTEILLAADMDPTISVGGILNSI-GGNIRVGDSELFVTEACEYTNSFLS 176
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P++ V+ N++ +H+D F+D +++ FR+F +++ G LVI D R + D
Sbjct: 177 FFPTMEVILNIEEDHLDFFKDIHDIRNSFRQFAEKLPEDGLLVISSDIDNYREITD---- 232
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR 367
G +++T G +D+ A+++ + + L G
Sbjct: 233 ---------------------GLACQVVTCGSQPSSDYSADNITYDEFARPAFDLMIGGE 271
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
+I L +PG HNV N+LA IA R+ S+ ++ L +F G +RRF+ G
Sbjct: 272 KAGRIRLGVPGEHNVYNALAAIALC-------RKLDVSMENIREGLLRFTGTNRRFEKKG 324
Query: 428 TIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ G I DD+AHHP E+ A L AAR +P+ + VFQPHTY+R D FA ALS A
Sbjct: 325 ELAGITIIDDYAHHPREIAATLAAARN-YPHNKIWCVFQPHTYTRTKAFLDQFAEALSMA 383
Query: 488 DQVVVSAV 495
D+V+++ +
Sbjct: 384 DEVILADI 391
>gi|374312758|ref|YP_005059188.1| UDP-N-acetylmuramate--L-alanine ligase [Granulicella mallensis
MP5ACTX8]
gi|358754768|gb|AEU38158.1| UDP-N-acetylmuramate/alanine ligase [Granulicella mallensis
MP5ACTX8]
Length = 458
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 142/401 (35%), Positives = 207/401 (51%), Gaps = 40/401 (9%)
Query: 92 AKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIP 151
A++ L G+ VSGSDL S+ E L GA ++ GH+ +N +D VV SSA+
Sbjct: 22 AEILLTMGYAVSGSDLRGSATTERLARLGATIYTGHTAANAAASD------VVVTSSAVA 75
Query: 152 QDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLT 211
+DN E+L A++ +P+ +R LA+L IA++G HGK+TT SM+A VL D T
Sbjct: 76 KDNPEVLEARARKIPVIQRAEMLAELMRLKYGIAIAGMHGKTTTTSMVAAVLAGGALDPT 135
Query: 212 AIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDA 271
+VG V + G + V EADE D FL LSP +AVVTNLD EH+D + D
Sbjct: 136 VVVGGRVDAMGSNARL-GRSQYLVAEADESDRSFLKLSPILAVVTNLDREHMDTYADLAD 194
Query: 272 VKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHD 331
V+ +F F+ ++ G + C D++ R++L ++ +
Sbjct: 195 VERVFVEFMDRVPFYGAITACVDNEMLRAILPRVTR------------------------ 230
Query: 332 YKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIAT 391
+I TYG S D+ + P + + + RG L +L +PG HN+LN+ A +A
Sbjct: 231 -RIYTYGESPDADFRLRVLRPAPDCHATFEVNTRGLVLGPFNLHVPGRHNLLNATAAVAI 289
Query: 392 VLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQA 451
+ L E IA L+ F GV RRF G G + DD+ HHPTE+RA LQA
Sbjct: 290 GVQL----GIPPEKIAA---GLASFRGVDRRFQTKGVQNGVTVVDDYGHHPTEIRATLQA 342
Query: 452 ARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
AR+ + L+ +FQPH Y+R L +DF A +AD + V
Sbjct: 343 ARECGYGRVLV-LFQPHRYTRTRDLLEDFTTAFGDADSLQV 382
>gi|257454702|ref|ZP_05619958.1| UDP-N-acetylmuramate--alanine ligase [Enhydrobacter aerosaccus
SK60]
gi|257448012|gb|EEV22999.1| UDP-N-acetylmuramate--alanine ligase [Enhydrobacter aerosaccus
SK60]
Length = 504
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 151/442 (34%), Positives = 224/442 (50%), Gaps = 51/442 (11%)
Query: 57 TNCTFKRNEECIVDFKN--RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYME 114
TN K+ + +V+ R +HFVGIGG+G+ +A++ G+ VSGSD+ S +
Sbjct: 19 TNRVTKKITKRVVEIPEMRRIRHVHFVGIGGAGMCGIAEVVHNHGYMVSGSDIKQSPVTD 78
Query: 115 GLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWL 174
L + G + IGH NI D VV SSAI N EI A S +P+ +R L
Sbjct: 79 RLTQMGIQVFIGHDSKNISEAD------VVVVSSAIDHTNPEIQAALSGRIPVVRRADML 132
Query: 175 AKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNF 234
+L + IAV+G+HGK+TT S+L +L G D T ++G + + G +
Sbjct: 133 GELMRYRHGIAVAGAHGKTTTTSLLTMILTEAGLDPTYVIGGKLNASGKNASL-GQSRYL 191
Query: 235 VLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICG 293
V EADE D FL L P A+VTN+D +H++ + D +K+ + +FL+ + G V+CG
Sbjct: 192 VAEADESDASFLSLRPMAAIVTNIDQDHMETYGGSFDKLKAAYVQFLQNMPFYGLAVLCG 251
Query: 294 DSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPN 353
D + L+D+I + ++TYG ND A V +
Sbjct: 252 DDKELYGLIDKIAR-------------------------PVLTYGLEKHNDVQAIDVVAD 286
Query: 354 VQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPL 413
+L + PL I+L IPG+HNV N+LA I T+ D+ S E+I C +
Sbjct: 287 GTKTHFTVLRKDREPLP-ITLNIPGIHNVYNALAAI----TISTDEGVSDEAI-CQAV-- 338
Query: 414 SKFMGVSRRFDLIGTIYGCH-------IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQ 466
KF GV RRF+ G Y + DD+ HHPTEV ++AARQ +P++ L+ +FQ
Sbjct: 339 KKFAGVGRRFENNGN-YPVKDGAGDVLLIDDYGHHPTEVAMTIKAARQSYPDRRLVMIFQ 397
Query: 467 PHTYSRLVVLKDDFANALSEAD 488
PH ++R DDF + LS+ D
Sbjct: 398 PHRFTRTRDCFDDFVDVLSQVD 419
>gi|442323129|ref|YP_007363150.1| UDP-N-acetylmuramate--L-alanine ligase [Myxococcus stipitatus DSM
14675]
gi|441490771|gb|AGC47466.1| UDP-N-acetylmuramate--L-alanine ligase [Myxococcus stipitatus DSM
14675]
Length = 472
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 152/427 (35%), Positives = 226/427 (52%), Gaps = 44/427 (10%)
Query: 71 FKNR-KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSV 129
FK R +HFVGIGG G+S +A++ L G+ VSGSDL S L GA L GH
Sbjct: 10 FKTRHAAQVHFVGIGGIGMSGIAEVLLNLGYRVSGSDLKESDITRRLARMGATLFEGHKA 69
Query: 130 SNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGS 189
N+ D VV SSA+ +DN E++ A+ +P+ R LA+L +AV+GS
Sbjct: 70 QNLVQAD------VVVISSAVRKDNPEVVTARQRKIPVIPRAEMLAELMRLKYSVAVAGS 123
Query: 190 HGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLS 249
HGK+TT SM+A VL A G D TA+VG V D + G + V+EADE DG FL L
Sbjct: 124 HGKTTTTSMVATVLSAAGLDPTAVVGGKV-NVLDSNAKLGNSELMVVEADESDGSFLKLH 182
Query: 250 PSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
PS+++VTN+D EH+D + + +++ F F ++ G V+C D+ ++LL +I++
Sbjct: 183 PSISIVTNIDPEHMDHYGSLETLQTAFVEFCNRVPFYGLNVLCLDNPNVQALLPRIEK-- 240
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRP 368
+ +TYG S D+ ES+ ++ G + + R
Sbjct: 241 -----------------------RFVTYGSSHMADYRLESI--SLDGFTTTFQAFRREEA 275
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
L + +++ G HN N+LAVIA + + ++ L++F GV RRF + G
Sbjct: 276 LGEFRVRMVGAHNAFNALAVIAVA-------EEMDIPLETVRTALAEFGGVQRRFTVKGE 328
Query: 429 IYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
G + DD+ HHPTEV A L AR+ F + ++A FQPH Y+R L +F A ++AD
Sbjct: 329 AKGITVVDDYGHHPTEVLATLAGARRAFGRRVVVA-FQPHRYTRTHDLMKEFTTAFNDAD 387
Query: 489 QVVVSAV 495
+ VS+V
Sbjct: 388 VLFVSSV 394
>gi|300858813|ref|YP_003783796.1| UDP-N-acetylmuramate--L-alanine ligase [Corynebacterium
pseudotuberculosis FRC41]
gi|384504987|ref|YP_005681657.1| UDP-N-acetyl muramate--L-alanine ligase [Corynebacterium
pseudotuberculosis 1002]
gi|300686267|gb|ADK29189.1| UDP-N-acetylmuramate--alanine ligase [Corynebacterium
pseudotuberculosis FRC41]
gi|302331073|gb|ADL21267.1| UDP-N-acetyl muramate--L-alanine ligase [Corynebacterium
pseudotuberculosis 1002]
Length = 485
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 143/439 (32%), Positives = 224/439 (51%), Gaps = 64/439 (14%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H +GIGG+G+S +A++ L +G VSGSD+ S + L GA++ +GH+ N+ +
Sbjct: 13 VHLIGIGGAGMSGVARILLSRGATVSGSDVKDSRAVLALRFMGAHVAVGHAAENL--SIA 70
Query: 138 SRFPNAVVAS-SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
P VV S +AIPQDN E++ A+ +G+P+ +R L +L E + ++G+HGK++T
Sbjct: 71 GEKPTVVVTSFAAIPQDNPELVAARELGIPVIRRSDLLGELMEGSTQVLIAGTHGKTSTT 130
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM ++A G D + +G + + + G G FV EADE D L P++AV+T
Sbjct: 131 SMAVVAMQAAGMDPSFAIGGQLNKAGTNA-HQGTGDAFVAEADESDASLLRYKPNIAVIT 189
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F+ E+A +F +F ++ G LV+C D L +I +
Sbjct: 190 NIEPDHLDFFKSEEAYFEVFEKFADRLVPGVSLVVCLDDPHTAMLGQKIHE--------- 240
Query: 317 VVSNQSSDLWGQGHDYKIITYG---------------FSSFNDWYAESVCPNVQGGSDYI 361
+ D K++ YG SF ++ +V V GG +
Sbjct: 241 -----------KHKDIKVVGYGTVAASAEYPDIAKTVVESFEITHSGTVATIVVGGQE-- 287
Query: 362 LCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSR 421
++ L+ PG H VLN+ A + + GD + L +S F GV R
Sbjct: 288 --------TEVVLRTPGRHMVLNAAAALTAGVIAGGD-------LFKLAAGISDFSGVRR 332
Query: 422 RFDLIGTI-----YGCHIYDDFAHHPTEVRAVLQAARQRFPNKA---LIAVFQPHTYSRL 473
RF+ G + G +YDD+AHHPTEV AVL AAR + + L+ +FQPH YSR
Sbjct: 333 RFEYHGVVAEGDFAGIELYDDYAHHPTEVSAVLTAARAKLQARGQGRLLVIFQPHLYSRT 392
Query: 474 VVLKDDFANALSEADQVVV 492
+ D+FA ALS AD+ +V
Sbjct: 393 INFVDEFAAALSLADEAIV 411
>gi|304407502|ref|ZP_07389154.1| UDP-N-acetylmuramate/alanine ligase [Paenibacillus curdlanolyticus
YK9]
gi|304343453|gb|EFM09295.1| UDP-N-acetylmuramate/alanine ligase [Paenibacillus curdlanolyticus
YK9]
Length = 444
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 138/413 (33%), Positives = 227/413 (54%), Gaps = 45/413 (10%)
Query: 88 LSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVAS 147
+SA+A++ L+ G++V+GSD+V + E L + GA + IGH +++G D VV S
Sbjct: 1 MSAIARVMLEMGYKVTGSDVVRAELTEKLAQKGAGIFIGHEAEHVKGAD------LVVYS 54
Query: 148 SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMG 207
+A+ +DNVE A+ + +P+ R L++L +AV+G+HGK+TT+SM+A V++
Sbjct: 55 TALSKDNVERKAAEELNIPVLHRAQMLSRLMNAGKGVAVAGAHGKTTTSSMIALVMETCK 114
Query: 208 DDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFE 267
D T I+G + + G G+ V EADE DG FL P++A+VTN++ +H++ +E
Sbjct: 115 IDPTYIIGGEIVNVGTNA-KAGKGEYVVAEADESDGSFLQYHPTIAIVTNIEPDHLENYE 173
Query: 268 -DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLW 326
D + +K + +FL Q++ G ++C D + +L ++ GG + N
Sbjct: 174 GDFNKLKEAYVQFLHQVKPDGKAIVCIDDTNLQEMLPSLR--------GGALRND----- 220
Query: 327 GQGHDYKIITYGFSSFNDWYAESVCPNVQGGS---DYILCERGRPLAQISLQIPGVHNVL 383
+I+TYG D A ++Q G +IL G L + L +PG HNV
Sbjct: 221 ------QIVTYGI----DQEANYRASDLQLGDRKVSFILHRDGETLGNVELSVPGRHNVY 270
Query: 384 NSLAVIATVLTLIGDKRQSHESIA-CLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHP 442
N++A I T L + S ES+A ++L F G RRF ++G + DD+AHHP
Sbjct: 271 NAMATIITCL----EAGLSFESVAEAIRL----FRGAKRRFHVLGEKNDILVIDDYAHHP 322
Query: 443 TEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
TE++A + AA+ K ++AVFQP Y+R L + F+ A EAD+V+++ +
Sbjct: 323 TEIQATISAAKA--TGKRIVAVFQPQRYTRTYFLLEQFSCAFGEADEVIITDI 373
>gi|115350518|ref|YP_772357.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia ambifaria
AMMD]
gi|122324103|sp|Q0BIK0.1|MURC_BURCM RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|115280506|gb|ABI86023.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia ambifaria
AMMD]
Length = 465
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 149/426 (34%), Positives = 216/426 (50%), Gaps = 48/426 (11%)
Query: 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGND 136
IHFVGIGG+G+S +A++ + G+EVSGSDL ++ + L GA + IGH +NI G
Sbjct: 7 QIHFVGIGGAGMSGIAEVLVNLGYEVSGSDLSRNAVTDRLEALGARIAIGHDAANIAG-- 64
Query: 137 GSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
NAVV S+A+ DN E+L A+ GVPI +R LA+L IA++G+HGK+TT
Sbjct: 65 ----ANAVVVSTAVRSDNPEVLAARHQGVPIVQRAVMLAELMRLKQGIAIAGTHGKTTTT 120
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
S++A VL A G D T ++G + + G G V EADE D FL L P + V+T
Sbjct: 121 SLVASVLAAGGLDPTFVIGGRLIS-AGANARLGTGDFIVAEADESDASFLNLYPVIEVIT 179
Query: 257 NLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
N+D +H+D + D +K F F +++ G V+C D R ++ I +
Sbjct: 180 NIDADHMDTYGHDFARLKQAFIEFTQRLPFYGSAVVCVDDPNVRQIIPFISK-------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQ 375
++ YG S AE + G + + GR + L
Sbjct: 232 -----------------PVVRYGLSPDAQVRAEDIDAR-DGRMHFTVIREGRAPLAVVLN 273
Query: 376 IPGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH- 433
+PG+HNV N+LA IA L + D ++ L++F GV RRF G +
Sbjct: 274 LPGLHNVQNALAAIAIATDLGVSDD--------AIQQALAEFNGVGRRFQRYGEVPSADG 325
Query: 434 ----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
+ DD+ HHP E+ A + AAR FP + L+ FQPH Y+R DDF N LS D
Sbjct: 326 GQYTLIDDYGHHPVEMAATVAAARGAFPGRRLVLAFQPHRYTRTRDCFDDFVNVLSTVDA 385
Query: 490 VVVSAV 495
+V++ V
Sbjct: 386 LVLTEV 391
>gi|78065122|ref|YP_367891.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia sp. 383]
gi|109892696|sp|Q39JW9.1|MURC_BURS3 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|77965867|gb|ABB07247.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia sp. 383]
Length = 465
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 149/425 (35%), Positives = 217/425 (51%), Gaps = 48/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ + G+EVSGSDL ++ + L GA + IGH NI+G
Sbjct: 8 IHFVGIGGAGMSGIAEVLVNLGYEVSGSDLSRNAVTDRLQALGARIAIGHDAVNIEG--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
NAVV S+A+ DN E+L A++ VPI +R LA+L IA++G+HGK+TT S
Sbjct: 65 ---ANAVVVSTAVRSDNPEVLAARAKRVPIVQRAVMLAELMRLKQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL A G D T ++G + + G G V EADE D FL L P + V+TN
Sbjct: 122 LVASVLAAGGLDPTFVIGGRLIS-AGANARLGTGDFIVAEADESDASFLNLYPVIEVITN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D +K F F +++ G V+C D R ++ I +
Sbjct: 181 IDADHMDTYGHDFARLKQAFIEFTQRLPFYGSAVVCVDDPNVRQIIPFISK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++ YG S AE + G + + GR + L +
Sbjct: 232 ----------------PVVRYGLSPDAQVRAEDIDAR-DGRMHFTVIRDGRAPLAVVLNM 274
Query: 377 PGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH-- 433
PG+HNV N+LA IA L + D ++L L++F GV RRF G +
Sbjct: 275 PGLHNVQNALAAIAIATDLGVSDD--------AIQLALAEFNGVGRRFQRYGEVPAADGG 326
Query: 434 ---IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP E+ A + AAR FP + L+ FQPH Y+R DDF N LS D +
Sbjct: 327 QYTLIDDYGHHPVEMAATIAAARGAFPGRRLVLAFQPHRYTRTRDCFDDFVNVLSTVDAL 386
Query: 491 VVSAV 495
V++ V
Sbjct: 387 VLTEV 391
>gi|393719276|ref|ZP_10339203.1| UDP-N-acetylmuramate--L-alanine ligase [Sphingomonas echinoides
ATCC 14820]
Length = 467
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 155/424 (36%), Positives = 226/424 (53%), Gaps = 43/424 (10%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G+ V GSD+ +EGL G + IGH N+
Sbjct: 9 GTIHFVGIGGIGMSGIAEVMKNLGYAVQGSDVAEGYVVEGLRAKGIPVAIGHRADNL--G 66
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D + +V S+AI + N E+ A +P+ +R LA+L + +AV+G+HGK+TT
Sbjct: 67 DAA----VIVTSTAIKRGNPEVEAALERRIPVVRRAEMLAELMRLKSTVAVAGTHGKTTT 122
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L A G D T I G + + + G V+EADE DG FL L ++AVV
Sbjct: 123 TSMVAALLDAGGVDPTVINGGIINSYGSNARL-GASDWMVVEADESDGSFLRLDGTIAVV 181
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D + DAVK F F++ + G ++C D ++++ +++
Sbjct: 182 TNIDPEHLDHYGSFDAVKDAFVEFVENVPFYGAALLCLDHPEVQNIIPRVR--------- 232
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS-DYILCERG---RPLAQ 371
D +++TYGFS+ +D +V P G + I+ R R +
Sbjct: 233 ---------------DRRVVTYGFSAQSDVRGVNVTPTPGGNRFEVIIRHRDGTTRSIEG 277
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG 431
I L +PG HNV N+LA I L L D A ++ +KF GV RRF +G G
Sbjct: 278 IDLPMPGRHNVQNALAAIGVALELGIDD-------ATIQQGFAKFGGVKRRFTKVGETGG 330
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
I DD+ HHP E+RAVL AAR+ N+ +IAV QPH YSRL L ++F A ++AD V
Sbjct: 331 VTIIDDYGHHPVEIRAVLSAAREGVQNR-VIAVVQPHRYSRLGDLMEEFQGAFNDADMVF 389
Query: 492 VSAV 495
V+ V
Sbjct: 390 VAPV 393
>gi|336123373|ref|YP_004565421.1| UDP-N-acetylmuramate--alanine ligase [Vibrio anguillarum 775]
gi|335341096|gb|AEH32379.1| UDP-N-acetylmuramate--alanine ligase [Vibrio anguillarum 775]
Length = 486
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 145/440 (32%), Positives = 222/440 (50%), Gaps = 61/440 (13%)
Query: 66 ECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHI 125
+V R IHFVGIGG+G+S +A++ L +G++++GSDL + E L GA ++I
Sbjct: 13 RAMVPEMRRVKCIHFVGIGGAGMSGIAEVLLNEGYQITGSDLASNPVTERLASKGAIIYI 72
Query: 126 GHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIA 185
GH +NI+ + VV S+AI + N E+ A+ +PI +R LA+L + IA
Sbjct: 73 GHQATNIE------LASVVVVSTAIDELNPELKAARERRIPIVRRAEMLAELMRFRHGIA 126
Query: 186 VSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLE 237
V+G+HGK+TT +++ + G D P F +G + G N + E
Sbjct: 127 VAGTHGKTTTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGSSRILIAE 177
Query: 238 ADEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQ 296
ADE D FL L P V++VTN++ +H+D + D + +K F FL + G ++C D
Sbjct: 178 ADESDASFLHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAILCIDDP 237
Query: 297 CARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG 356
R ++ +I + ++ITYGF+ D E+ Q
Sbjct: 238 VVREIIPRISR-------------------------QVITYGFADDADVRIENYHQQGQQ 272
Query: 357 GSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKF 416
G + + +GR I+L IPG HN LN+ A IA + S E+I LK ++
Sbjct: 273 GQ-FTVVRQGRANLDITLNIPGRHNALNASAAIAVAT----EDDISDEAI--LK-AMAST 324
Query: 417 MGVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSR 472
G RRFD +G + + DD+ HHPTEV ++AAR + K L+ +FQPH YSR
Sbjct: 325 QGTGRRFDHLGEFDTGNGVAMLVDDYGHHPTEVGVTIKAARSGWQEKRLVMIFQPHRYSR 384
Query: 473 LVVLKDDFANALSEADQVVV 492
L DDFAN L + D +++
Sbjct: 385 TRDLYDDFANVLEQVDVLIM 404
>gi|317050839|ref|YP_004111955.1| UDP-N-acetylmuramate/alanine ligase [Desulfurispirillum indicum S5]
gi|316945923|gb|ADU65399.1| UDP-N-acetylmuramate/alanine ligase [Desulfurispirillum indicum S5]
Length = 453
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 143/422 (33%), Positives = 227/422 (53%), Gaps = 41/422 (9%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
+K IHFVGIGG G+S +A++ L + VSGSD+ S+ L GA ++ GH+ SNI
Sbjct: 4 KKNKIHFVGIGGIGMSGIAEVLLNLDYHVSGSDIRQSATTARLESLGARIYYGHAHSNIT 63
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
+ VV SSA+ ++N E+ A+ +P+ R LA+L + + ++G+HGK+
Sbjct: 64 D------AHVVVTSSAVSKENPEVAEARRKRIPVISRAEMLAELMRMKHGVLIAGAHGKT 117
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S++A VL G D T ++G + + + G G V EADE DG F+ L P ++
Sbjct: 118 TTTSLVATVLTDAGLDPTVVIGGRLNKIKSNAKL-GQGDLIVAEADESDGSFMHLPPVLS 176
Query: 254 VVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 313
VVTN+D EH+D + + +K+ F +F+ + G +C D + + +L +I++
Sbjct: 177 VVTNIDKEHMDHYGSMENLKNTFLKFINKTPFFGVSFVCLDDEHIQDILPRIERSH---- 232
Query: 314 SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQIS 373
+TYG ++ D +A + G + + GR L +
Sbjct: 233 ---------------------VTYGLNTNADIFAHHI-RRTNGCQRFDVNYNGRELGEFR 270
Query: 374 LQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH 433
L +PGVHNV+NSL VI L + ++ L F GV RRF++ G + G
Sbjct: 271 LCLPGVHNVVNSLPVIGIALEF-------EVPVDTIRHSLEHFAGVHRRFEITGHMNGFA 323
Query: 434 IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVS 493
+ DD+ HHPTE+ AVL+AAR+ + K +IA+FQPH YSR+ L +DF + +AD+V+V+
Sbjct: 324 VVDDYGHHPTEIMAVLKAAREWYSGK-VIAIFQPHRYSRVRELYEDFTKSFYDADEVIVA 382
Query: 494 AV 495
+
Sbjct: 383 DI 384
>gi|407363734|ref|ZP_11110266.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas mandelii JR-1]
Length = 486
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 154/424 (36%), Positives = 216/424 (50%), Gaps = 47/424 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G+EVSGSDL S E L GA++ IGH N D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKASPVTERLESFGAHIFIGHRAENAAAAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 78 -----VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ ++ D + +K F FL + G V+C D R +L +K+ T
Sbjct: 192 IDADHMATYDGDFNKLKKTFVEFLHNLPFYGLAVVCLDDPVVREILPLVKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER-GRPLAQISLQ 375
+TYGF D A +V QG + R R +S+
Sbjct: 245 ------------------VTYGFGDDCDVRAINV--RQQGMQTFFTVLRPDREPLDVSVN 284
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----G 431
+PG HNVLN+LA I + D+ S E+I LS F GV RRF + G +
Sbjct: 285 MPGNHNVLNALATIC----IATDEGVSDEAIV---QGLSGFQGVGRRFQVYGELPVEGGN 337
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+ HHPTEV AV+QA R +P + L+ V+QPH YSR L DDF N L++A+ ++
Sbjct: 338 VMLVDDYGHHPTEVAAVIQAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVNVLADANVLL 397
Query: 492 VSAV 495
+ V
Sbjct: 398 LMEV 401
>gi|219870392|ref|YP_002474767.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus parasuis
SH0165]
gi|254766005|sp|B8F3B7.1|MURC_HAEPS RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|219690596|gb|ACL31819.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus parasuis
SH0165]
Length = 475
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 150/475 (31%), Positives = 239/475 (50%), Gaps = 72/475 (15%)
Query: 60 TFKRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEA 119
F+ + +V R IHF+GIGG+G+S +A++ L +G+++SGSD+ + + L +A
Sbjct: 3 NFQDKVKKLVAEMRRVNQIHFIGIGGAGMSGIAEVLLNEGYQISGSDIADGAVTQRLAKA 62
Query: 120 GANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE 179
GA + IGH NI+G + VVASSAI + N E+ AK +P+ +R LA++
Sbjct: 63 GAKVFIGHQAENIEG------ASVVVASSAINESNPEVAAAKEARIPVIQRAQMLAEIMR 116
Query: 180 KYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN------ 233
+ IA++G+HGK+TT +M++ + G D P F +G + GKN
Sbjct: 117 FRHGIAIAGTHGKTTTTAMISMIYTEAGLD---------PTFVNGGLVKSAGKNAHLGAS 167
Query: 234 --FVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLV 290
+ EADE D FL L P V+VVTN++ +H+D + D + +K + RFL+ + G V
Sbjct: 168 RYLIAEADESDASFLHLQPMVSVVTNIEPDHMDTYGGDFEKMKETYVRFLRNLPFYGLAV 227
Query: 291 ICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESV 350
+C D + + ++ + ++I+YGFS D+ E
Sbjct: 228 MCADDETVMEIAPKVGR-------------------------QVISYGFSEKADYRIEDY 262
Query: 351 CPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIA--C 408
G ++C G + +I L +PG HN LN+ A +A E IA
Sbjct: 263 QQTGFQGHYTVVCPTGERI-EILLNVPGRHNALNATAALAVA---------KEEGIANEA 312
Query: 409 LKLPLSKFMGVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAV 464
+ L+ F G RRFD +G+ + + DD+ HHPTEV ++AARQ + NK ++ V
Sbjct: 313 ILAALADFQGAGRRFDQLGSFIRPNGKVMLVDDYGHHPTEVDVTIKAARQGWENKRVVMV 372
Query: 465 FQPHTYSRLVVLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
FQPH YSR L DDF LS+ D +++ L ++A ++ A + +C
Sbjct: 373 FQPHRYSRTRDLFDDFVQVLSQVDALIM-------LNVYAAGEAPIVGAESKDLC 420
>gi|262380536|ref|ZP_06073690.1| UDP-N-acetylmuramate-alanine ligase [Acinetobacter radioresistens
SH164]
gi|421856181|ref|ZP_16288550.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
gi|262297982|gb|EEY85897.1| UDP-N-acetylmuramate-alanine ligase [Acinetobacter radioresistens
SH164]
gi|403188431|dbj|GAB74751.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
Length = 482
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 147/430 (34%), Positives = 221/430 (51%), Gaps = 51/430 (11%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG+G+ +A++ QG+ VSGSD+ S L E G + IGH+ NI+
Sbjct: 21 RIKQIHFVGIGGAGMCGIAEVLKNQGYCVSGSDIKASKTTAQLEENGIEVFIGHAADNIK 80
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
G + +V S+AI +N E+ A +P+ +R L +L + IAV+G+HGK+
Sbjct: 81 G------ASVLVVSTAIDPENPEVKAAIEQRIPVVRRAEMLGELMRYRHGIAVAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S+L +L G D T ++G + + + G + V EADE D FL L P A
Sbjct: 135 TTTSLLTCMLAEEGMDPTYVIGGLLNRTGVNAAL-GASRYIVAEADESDASFLHLEPMAA 193
Query: 254 VVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
+VTN+D +H+D + D +K F +FL ++ G V+CGD R ++ +I +
Sbjct: 194 IVTNIDADHMDTYGGSFDVLKDTFIQFLHKLPFYGLAVVCGDDANIREIMPRIAR----- 248
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLA 370
++TYGF+ ND A V Q G S + + + R
Sbjct: 249 --------------------PLLTYGFNPDNDIRAVDV---EQDGMRSHFTVLRKDREPL 285
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
++++ PG+HNVLN+LA I G S A + L F GV RRF + G +
Sbjct: 286 RLTINQPGLHNVLNALAAI-------GVATDEGVSDAAIGRALEGFSGVGRRFQVQGE-F 337
Query: 431 GCH-----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
G + DD+ HHP EV A ++AARQ P++ L+ +FQPH +SR DDF + LS
Sbjct: 338 GLEQGTVKLVDDYGHHPKEVEATIKAARQSHPDRRLVMMFQPHRFSRTRDCFDDFVDVLS 397
Query: 486 EADQVVVSAV 495
+ DQ+++ V
Sbjct: 398 QVDQLLLLEV 407
>gi|333901747|ref|YP_004475620.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas fulva 12-X]
gi|333117012|gb|AEF23526.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas fulva 12-X]
Length = 482
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 155/424 (36%), Positives = 219/424 (51%), Gaps = 49/424 (11%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
HFVGIGG+G+ +A++ L G+EVSGSDL S+ E L GA + IGH N + D
Sbjct: 22 HFVGIGGAGMCGIAEVLLNLGYEVSGSDLKTSAVTERLENFGAQIFIGHRAENAESAD-- 79
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
+V SSAI N E+ A +P+ R LA+L + IAV+G+HGK+TT S+
Sbjct: 80 ----VLVVSSAINTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTSL 135
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
LA V A G D T ++G + + G + + EADE D FL L P V+VVTN+
Sbjct: 136 LASVFAAGGLDPTFVIGGRL-NAAGTNAQLGSSRYLIAEADESDASFLHLQPMVSVVTNI 194
Query: 259 DWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
D +H+ +E D + +K F FL + G V+C D R +L Q+ + T
Sbjct: 195 DMDHMSTYEGDFNKLKKTFIEFLHNLPFYGLAVLCVDDPVVREILAQVGRPT-------- 246
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERG--RPLAQISLQ 375
+TYGFS D A +V QG + R PL +S+
Sbjct: 247 -----------------LTYGFSEDADVRAINV--RQQGMQTFFTVLRPDCEPL-DVSVN 286
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG--TIYGCH 433
+PG HNVLN+LA I + D+ S E+I LS+F GV RRF + G + G
Sbjct: 287 MPGNHNVLNALATIC----IASDEGISDEAIV---QGLSQFQGVGRRFQVYGQLPVEGGE 339
Query: 434 IY--DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+ HHP EV AV++A R +P + L+ V+QPH YSR L DDF L++A+ ++
Sbjct: 340 VMLVDDYGHHPREVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVQVLTDANVLL 399
Query: 492 VSAV 495
+ V
Sbjct: 400 LMEV 403
>gi|167856479|ref|ZP_02479196.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus parasuis 29755]
gi|167852402|gb|EDS23699.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus parasuis 29755]
Length = 475
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 149/475 (31%), Positives = 239/475 (50%), Gaps = 72/475 (15%)
Query: 60 TFKRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEA 119
F+ + +V R IHF+GIGG+G+S +A++ L +G+++SGSD+ + + L +A
Sbjct: 3 NFQDKVKKLVPEMRRVNQIHFIGIGGAGMSGIAEVLLNEGYQISGSDIADGAVTQRLAKA 62
Query: 120 GANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE 179
GA + IGH NI+G + VVASSAI + N E+ AK +P+ +R LA++
Sbjct: 63 GAKVFIGHQAENIEG------ASVVVASSAINESNPEVAAAKEARIPVIQRAQMLAEIMR 116
Query: 180 KYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN------ 233
+ IA++G+HGK+TT +M++ + G D P F +G + GKN
Sbjct: 117 FRHGIAIAGTHGKTTTTAMISMIYTEAGLD---------PTFVNGGLVKSAGKNAHLGAS 167
Query: 234 --FVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLV 290
+ EADE D FL L P V+VVTN++ +H+D + D + +K + RFL+ + G V
Sbjct: 168 RYLIAEADESDASFLHLQPMVSVVTNIEPDHMDTYGGDFEKMKETYVRFLRNLPFYGLAV 227
Query: 291 ICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESV 350
+C D + + ++ + ++I+YGFS D+ E
Sbjct: 228 MCADDETVMEIAPKVGR-------------------------QVISYGFSEKADYRIEDY 262
Query: 351 CPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIA--C 408
G ++C G + ++ L +PG HN LN+ A +A E IA
Sbjct: 263 QQTGFQGHYTVVCPTGERI-EVLLNVPGRHNALNATAALAVA---------KEEGIANEA 312
Query: 409 LKLPLSKFMGVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAV 464
+ L+ F G RRFD +G+ + + DD+ HHPTEV ++AARQ + NK ++ V
Sbjct: 313 ILAALADFQGAGRRFDQLGSFIRPNGKVMLVDDYGHHPTEVDVTIKAARQGWENKRVVMV 372
Query: 465 FQPHTYSRLVVLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
FQPH YSR L DDF LS+ D +++ L ++A ++ A + +C
Sbjct: 373 FQPHRYSRTRDLFDDFVQVLSQVDALIM-------LNVYAAGEAPIVGAESKDLC 420
>gi|149190169|ref|ZP_01868445.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio shilonii AK1]
gi|148836058|gb|EDL53019.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio shilonii AK1]
Length = 486
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 146/432 (33%), Positives = 222/432 (51%), Gaps = 61/432 (14%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG+G+S +A++ L +G++++GSDL ++ E L + GA ++IGH SNI+
Sbjct: 21 RVKCIHFVGIGGAGMSGIAEVLLNEGYQITGSDLAENAVTERLTQKGATVYIGHQASNIE 80
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
+ VV S+AI +N E++ AK + +P+ +R LA+L + IAV+G+HGK+
Sbjct: 81 N------ASVVVVSTAIDPENQELVAAKELRIPVVRRAEMLAELMRFRHGIAVAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEADEYDGCF 245
TT +++ + G D P F +G + G N + EADE D F
Sbjct: 135 TTTALVTQIYSEAGMD---------PTFVNGGLVKSAGTNARLGSSRILIAEADESDASF 185
Query: 246 LGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 304
L L P V++VTN++ +H+D + D D +K F FL + G V+C D R L+
Sbjct: 186 LHLQPMVSIVTNIEADHMDTYGGDFDTLKQTFIDFLHNLPFYGQAVMCVDDPVVRELIPS 245
Query: 305 IKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE 364
+ + ++ITYGFS D E+ + Q G + +
Sbjct: 246 VSR-------------------------QVITYGFSDDADVRIENYRQDGQQGK-FTVVR 279
Query: 365 RGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFD 424
+GR +I+L IPG HN LN+ A IA + + E+I L G RRF+
Sbjct: 280 KGRENLEITLNIPGQHNALNAAAAIAVAT----EDNIADEAIVNAMLGTE---GTGRRFE 332
Query: 425 LIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
+G + + DD+ HHPTEV ++AAR + K L+ +FQPH YSR L DDF
Sbjct: 333 HLGEFETGNGKVMLVDDYGHHPTEVDVTIKAARNGWAEKRLVMIFQPHRYSRTRDLYDDF 392
Query: 481 ANALSEADQVVV 492
AN L + D +V+
Sbjct: 393 ANVLEQVDVLVM 404
>gi|337285806|ref|YP_004625279.1| UDP-N-acetylmuramate/alanine ligase [Thermodesulfatator indicus DSM
15286]
gi|335358634|gb|AEH44315.1| UDP-N-acetylmuramate/alanine ligase [Thermodesulfatator indicus DSM
15286]
Length = 462
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 151/421 (35%), Positives = 228/421 (54%), Gaps = 46/421 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG G+S LA+L L+ GF+VSGSDL S L E GA ++ GH ++G +
Sbjct: 7 VHFIGIGGIGMSGLARLLLRLGFDVSGSDLNASETTRMLAEEGAIVYYGHHPKQVEGAE- 65
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLT--EKYNLIAVSGSHGKSTT 195
VV SSA+ +DN EI A+ +G+ + R L ++ ++NL+ V+G+HGK+TT
Sbjct: 66 -----LVVYSSAVSEDNPEIKRARELGLKVVPRAQMLVEIMALHRHNLV-VTGAHGKTTT 119
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAV 254
SMLA VL G T +VG V F DG+ + G + ++L EADE DG FL ++P A+
Sbjct: 120 TSMLASVLTKGGLSPTVVVGGKVNGF-DGNAWLGEEREYLLAEADESDGSFLRMTPEHAI 178
Query: 255 VTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYS 314
+TN+D EH+D + D + F RF+ Q++ G +++C D + LL K+ KY
Sbjct: 179 ITNIDKEHLDFYRDFGEILEAFVRFVDQVK--GKVIVCLDDPGVKKLL---KRKPSAKY- 232
Query: 315 GGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISL 374
+TYGF + A + + S + + E + L ++ +
Sbjct: 233 --------------------LTYGFEEQAFYRARVIKEGAR--SVFAVFENDKILGEVVV 270
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHI 434
PG HN+LN+LA +A TL S ++ LS F GV RRFDL G +
Sbjct: 271 PFPGKHNILNALATVALARTL-------EISFKDIRKGLSDFKGVRRRFDLKGKAGDILV 323
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSA 494
+DD+AHHP E+ + A ++ FP + L+ +FQPH Y+R L DDF EAD ++V+
Sbjct: 324 FDDYAHHPREIETTIAAFKKSFPKRRLVILFQPHRYTRTKALFDDFIKCFDEADVLLVTE 383
Query: 495 V 495
+
Sbjct: 384 I 384
>gi|387773918|ref|ZP_10129200.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus
parahaemolyticus HK385]
gi|386903410|gb|EIJ68225.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus
parahaemolyticus HK385]
Length = 475
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 152/475 (32%), Positives = 238/475 (50%), Gaps = 72/475 (15%)
Query: 60 TFKRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEA 119
F+ + +V R IHF+GIGG+G+S +A++ L +G+++SGSD+ + L A
Sbjct: 3 NFQDKVKKLVPEMRRVSQIHFIGIGGAGMSGIAEVLLNEGYKISGSDIADGVVTKRLTAA 62
Query: 120 GANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE 179
GA++ IGHS NI G + VVASSAI ++N E+ AK +P+ +R LA++
Sbjct: 63 GAHIFIGHSAKNIAG------ASVVVASSAINEENPEVKAAKEARIPVIQRAQMLAEIMR 116
Query: 180 KYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN------ 233
+ IA++G+HGK+TT +M++ + G D P F +G + GKN
Sbjct: 117 FRHGIAIAGTHGKTTTTAMISMIYTEAGLD---------PTFVNGGLVKSAGKNAHLGAS 167
Query: 234 --FVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLV 290
V EADE D FL L P V+VVTN++ +H+D + D + +K + +FL+ + G V
Sbjct: 168 RYLVAEADESDASFLHLQPMVSVVTNIEPDHMDTYGGDFEKMKETYVKFLRNLPFYGLAV 227
Query: 291 ICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESV 350
+C D + ++ + ++ITYGFS D+ E
Sbjct: 228 MCADDATVMEIAPKVGR-------------------------QVITYGFSENADYRIEDY 262
Query: 351 CPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIA--C 408
G ++C G + ++ L +PG HN LN+ A +A E IA
Sbjct: 263 QQTGFQGHYTVICPNGERV-EVLLNVPGRHNALNATAALAVA---------KEEGIANEA 312
Query: 409 LKLPLSKFMGVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAV 464
+ L+ F G RRFD +G+ + + DD+ HHPTEV ++AARQ + NK ++ V
Sbjct: 313 ILAALADFQGAGRRFDQLGSFIRPNGKVMLVDDYGHHPTEVDVTIKAARQGWENKRIVMV 372
Query: 465 FQPHTYSRLVVLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
FQPH YSR L DDF LS+ D +V+ L ++A ++ A + +C
Sbjct: 373 FQPHRYSRTRDLFDDFVQVLSQVDALVM-------LDVYAAGEAPIVGADSKALC 420
>gi|334129343|ref|ZP_08503148.1| UDP-N-acetylmuramate-L-alanine ligase [Methyloversatilis
universalis FAM5]
gi|333445569|gb|EGK73510.1| UDP-N-acetylmuramate-L-alanine ligase [Methyloversatilis
universalis FAM5]
Length = 465
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 152/435 (34%), Positives = 222/435 (51%), Gaps = 52/435 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K++ IHF+GIGG+G+S +A++ L QG+ VSGSDL ++ L GA + GHS
Sbjct: 1 MKHKISHIHFIGIGGAGMSGIAEVLLNQGYVVSGSDLADNAVTRRLAALGARVVQGHSAD 60
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
NI D AVV S+A+ DN E++ A+ +PI R LA+L +AV+G+H
Sbjct: 61 NIADAD------AVVTSTAVSADNPEVVRARERRIPIVPRAQMLAELMRIKQGVAVAGTH 114
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S++A L G D T ++G + + G G+ V EADE D FL LSP
Sbjct: 115 GKTTTTSLIASCLAEGGLDPTFVIGGRL-NSAGANARLGSGEFLVAEADESDASFLFLSP 173
Query: 251 SVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
V+VVTN+D +H+D + D +K F FL ++ G V+C D R ++ Q+ +
Sbjct: 174 VVSVVTNIDADHMDTYGHDFGKLKQAFVDFLNRLPFYGVAVLCTDDANVREIMPQVPK-- 231
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS----DYILCER 365
+II YG ++ AE+V P+ G+ D +
Sbjct: 232 -----------------------QIIRYGLNADAQVRAENVRPD---GTRMLFDAVRVNG 265
Query: 366 GRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
+ L +PG+HNV N+LA IA V +G + + L++F GV RRF
Sbjct: 266 TTTRIPVELNLPGLHNVRNALAAIA-VANEVGVPDDA------IVRALAEFKGVGRRFTR 318
Query: 426 IGTIY---GCH--IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
G I G H + DD+ HHP E+ A L AAR +P + ++ FQPH Y+R +DF
Sbjct: 319 HGDIALPAGGHFTLVDDYGHHPVEMAATLDAARGAYPGRRIVLAFQPHRYTRTRDCFEDF 378
Query: 481 ANALSEADQVVVSAV 495
LS AD VV++ V
Sbjct: 379 VRVLSGADAVVLTEV 393
>gi|384566926|ref|ZP_10014030.1| UDP-N-acetylmuramate--alanine ligase [Saccharomonospora glauca K62]
gi|384522780|gb|EIE99975.1| UDP-N-acetylmuramate--alanine ligase [Saccharomonospora glauca K62]
Length = 474
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 143/415 (34%), Positives = 214/415 (51%), Gaps = 34/415 (8%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
H +GIGG+G+S +A++ L +G VSGSD S L GA + +G N+ D +
Sbjct: 18 HLIGIGGAGMSGIARILLARGARVSGSDAKDSRAFLTLRAQGARIEVGQKPENLDVFDDT 77
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
P+AV+ S+AI + N E A+ G+P+ R LA L E + + ++G+HGK++T SM
Sbjct: 78 --PSAVIVSTAIRKTNPEFAAARERGIPVLHRAEALAALMEGHRVACIAGTHGKTSTTSM 135
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
L L+ D + +G + + + +G G FV EADE DG FL SPSVAVVTN+
Sbjct: 136 LTVALQHCRLDPSFAIGGDLNE-SGANAHHGEGGIFVAEADESDGSFLTYSPSVAVVTNI 194
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ-DTGLKYSGGV 317
+ +H+D DA ++F F+++I GG L++C D A +L D+ ++ ++ G
Sbjct: 195 EPDHLDHHGTADAYHAVFADFVRRIEPGGVLIVCADDSAAAALGDRAEELGVRVRRYGRS 254
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
S +S D ++ Y P GG+ ++ G Q+ + +P
Sbjct: 255 ASGES--------DAMVLEY-------------HPGEDGGTVQVVL--GGEQLQVKVAVP 291
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD 437
G H N++ + L L D + L L+ F GV RRF+ G +YDD
Sbjct: 292 GEHMAFNAVGALLAGLELGAD-------LDALIEGLAAFGGVRRRFEFKGRAADVRVYDD 344
Query: 438 FAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+AHHPTEV A L+A RQ ++ VFQPH YSR +FA AL AD+VVV
Sbjct: 345 YAHHPTEVAAQLKAVRQTAGAGKVVVVFQPHLYSRTKAFAGEFAEALGLADEVVV 399
>gi|134102298|ref|YP_001107959.1| UDP-N-acetylmuramate--L-alanine ligase [Saccharopolyspora erythraea
NRRL 2338]
gi|291003739|ref|ZP_06561712.1| UDP-N-acetylmuramate--L-alanine ligase [Saccharopolyspora erythraea
NRRL 2338]
gi|189029030|sp|A4FLV9.1|MURC_SACEN RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|133914921|emb|CAM05034.1| UDP-N-acetylmuramate--alanine ligase [Saccharopolyspora erythraea
NRRL 2338]
Length = 490
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 152/415 (36%), Positives = 219/415 (52%), Gaps = 32/415 (7%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H VGIGG+G+S +A++ L +G +VSGSD S + L GA++ +GH NI+ DG
Sbjct: 25 VHLVGIGGAGMSGIARILLARGRQVSGSDARDSRTVLALKAQGAHIALGHRAENIEQFDG 84
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
P AVV S+AI +DN E++ A+ GVP+ +R LA L + + V+G+HGK++T S
Sbjct: 85 D--PTAVVVSTAIRRDNPELVAAQERGVPVLRRAEALAALMADHRVACVAGTHGKTSTTS 142
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
ML L+ D + +G + + + +G G FV EADE DG FL +PSVAVVTN
Sbjct: 143 MLTVALQHCRLDPSFAIGGDLNE-SGANAHHGDGGVFVAEADESDGSFLVFAPSVAVVTN 201
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
++ +H+D +A +F+RF+++I GG L+ C D A L DQ + + GV
Sbjct: 202 VEPDHLDHHGTAEAYTEVFQRFVERIEPGGVLIACADDAGAALLADQAE-------AAGV 254
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
++ YG D A V + GS + E + + +P
Sbjct: 255 ---------------RVRRYGHEVTADGDARMVGYRPEHGSGVVTVEVSGDRLDVQVAVP 299
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD 437
G H N++A + L L + L L+ F GV RRF+ G G +YDD
Sbjct: 300 GEHMAANAVAALLAGLELG-------APLEGLLEGLAAFGGVRRRFEFKGRADGVRVYDD 352
Query: 438 FAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+AHHPTEV A L+AAR + L+ VFQPH YSR +FA AL AD+VVV
Sbjct: 353 YAHHPTEVDAQLRAARPVVGDGRLVVVFQPHLYSRTAAFSGEFATALGLADEVVV 407
>gi|291530397|emb|CBK95982.1| UDP-N-acetylmuramate--L-alanine ligase [Eubacterium siraeum 70/3]
Length = 461
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 144/428 (33%), Positives = 225/428 (52%), Gaps = 40/428 (9%)
Query: 70 DFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSV 129
DF K +HF+GIGGSG+ LA++ +GF ++GSD + ++ + G +++G
Sbjct: 3 DFLTGKKHVHFIGIGGSGMYPLAQILHSKGFYLTGSDNNETETLKAVRNMGIPVYMGQRA 62
Query: 130 SNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYN-LIAVSG 188
NI+G D +V ++AI DN E++ AK+ GV +R L +T YN + VSG
Sbjct: 63 ENIEGAD------LIVYTAAIMSDNPELIAAKASGVKTVERCELLGLVTSWYNKAVCVSG 116
Query: 189 SHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGL 248
+HGK+TT+SML ++ A DL+ ++G + GS G V EA E+ FL L
Sbjct: 117 THGKTTTSSMLTHMYLAQNIDLSTVIGGKLKAIG-GSGRAGSSDVMVCEACEFSNTFLHL 175
Query: 249 SPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQD 308
P+++++ N+D +H+D F+ D +++ F +F LV+ GD +
Sbjct: 176 FPNISIILNIDADHLDFFKTMDNLRASFTKFCDNTT--DILVVNGDDE------------ 221
Query: 309 TGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP 368
N + G D +IIT+G + N +Y E++ +D+ L E G
Sbjct: 222 -----------NTMRAVKASGFDKQIITFGKTDKNRYYPENIKRISDFQTDFDLMENGNK 270
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
+ +IS+ +PG HNVLN++A A L + + + LS F G RRF+ + T
Sbjct: 271 IERISIHVPGAHNVLNAVAACAAAL-------ATGVTPENINKGLSTFWGAGRRFERLAT 323
Query: 429 IYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
I G + DD+AHHP EV A L+ A+ K + AV QP TYSR L DDFA+AL AD
Sbjct: 324 IGGITVVDDYAHHPAEVAATLKTAKAMQDFKRVWAVHQPFTYSRTYTLMDDFASALEIAD 383
Query: 489 QVVVSAVL 496
+VV++ ++
Sbjct: 384 KVVLTEIM 391
>gi|343503814|ref|ZP_08741620.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio ichthyoenteri ATCC
700023]
gi|342813900|gb|EGU48857.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio ichthyoenteri ATCC
700023]
Length = 486
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 146/440 (33%), Positives = 221/440 (50%), Gaps = 63/440 (14%)
Query: 67 CIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG 126
+V R IHF+GIGG+G+S +A++ L +G++++GSD+ + + L + GA ++IG
Sbjct: 14 AMVPEMRRVKSIHFIGIGGAGMSGIAEVLLNEGYQITGSDIAENPVTQRLTQKGATVYIG 73
Query: 127 HSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAV 186
H N + VV S+AI + N EI A+ +P+ +R LA+L + IAV
Sbjct: 74 HQAEN------VAHASVVVVSTAINEQNPEIKAAREARIPVVRRAEMLAELMRFRHGIAV 127
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEA 238
+G+HGK+TT +++ + G D P F +G + G N + EA
Sbjct: 128 AGTHGKTTTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGSSRILIAEA 178
Query: 239 DEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQC 297
DE D FL L P V++VTN++ +H+D + D + +K F FL + G ++C D
Sbjct: 179 DESDASFLHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAIVCIDDPV 238
Query: 298 ARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG 357
R L+ +I + ++ITYGFS+ D E+ N Q G
Sbjct: 239 VRELIPRISR-------------------------QVITYGFSADADVRIENYRQNGQQG 273
Query: 358 SDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKF 416
+ + +GR I+L IPG HN LN+ A IA IGD+ A L L
Sbjct: 274 K-FTVVRQGRANLDITLNIPGRHNALNASAAIAVATEDDIGDE-------AILNAMLGT- 324
Query: 417 MGVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSR 472
G RRFD +G + + DD+ HHPTEV +QAAR + +K L+ +FQPH YSR
Sbjct: 325 QGTGRRFDHLGEFETGNGIAMLVDDYGHHPTEVDVTIQAARSGWEDKRLVMIFQPHRYSR 384
Query: 473 LVVLKDDFANALSEADQVVV 492
L DDFAN L + D +++
Sbjct: 385 TRDLYDDFANVLEQVDVLIM 404
>gi|288870137|ref|ZP_06113069.2| UDP-N-acetylmuramate--alanine ligase [Clostridium hathewayi DSM
13479]
gi|288868258|gb|EFD00557.1| UDP-N-acetylmuramate--alanine ligase [Clostridium hathewayi DSM
13479]
Length = 463
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 151/428 (35%), Positives = 222/428 (51%), Gaps = 41/428 (9%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DF + IHF+GIGG +S LA++ + +GF VSGSD S + L GA + G
Sbjct: 8 IDFHKPEN-IHFIGIGGISMSGLAEILIDEGFTVSGSDSHESELTDHLAAKGARIAYGQR 66
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVS 187
NI DG + VV ++A+ DN E A G+P+ R L ++ + Y N +AVS
Sbjct: 67 AENIV--DGI---DVVVYTAAVHPDNPEFAAAMEKGLPMLSRAELLGQMMKNYENAVAVS 121
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT SM+ +L A D T VG + G+I GG + FV EA EY FL
Sbjct: 122 GTHGKTTTTSMITEILLAADADPTISVGGILNSI-GGNIRVGGPELFVTEACEYTNSFLS 180
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P++ V+ N++ +H+D F+D D ++ FR F +++ G LVI D + D K
Sbjct: 181 FFPTIEVILNVEADHLDFFKDLDDIRRSFRLFAEKLPKDGILVINSD------ITDYEKI 234
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR 367
GL ++IT+G + + AE + + + L G
Sbjct: 235 TEGLP-------------------CRVITFGKEESSKYRAEQIRFDELARPVFDLSVDGE 275
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
+ ++L +PG HNV NSLA IA + L S+ +K L KF G +RRF+ G
Sbjct: 276 TVDTVALGVPGEHNVYNSLAAIAVCMEL-------GISLEMIKKGLWKFTGTNRRFEKKG 328
Query: 428 TIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ G I DD+AHHP E+ A L A +P++ L VFQPHTY+R D+FA ALS A
Sbjct: 329 ELGGITIIDDYAHHPQEISASLATALN-YPHRKLWVVFQPHTYTRTKAFLDEFAEALSMA 387
Query: 488 DQVVVSAV 495
D+V+++ +
Sbjct: 388 DEVILADI 395
>gi|407069989|ref|ZP_11100827.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio cyclitrophicus ZF14]
Length = 486
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 148/439 (33%), Positives = 223/439 (50%), Gaps = 61/439 (13%)
Query: 67 CIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG 126
+V R IHF+GIGG+G+S +A++ L +G++++GSD+ + + L+ GA ++IG
Sbjct: 14 AMVPEMRRVKSIHFIGIGGAGMSGIAEVLLNEGYQITGSDIAQNPVTDRLVSKGATVYIG 73
Query: 127 HSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAV 186
H SN + VV S+AI ++N EI+ A+ PI +R LA+L + IAV
Sbjct: 74 HQASN------VADASVVVVSTAINEENPEIVAAREARTPIVRRAEMLAELMRFRHGIAV 127
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEA 238
+G+HGK+TT +++ + G D P F +G + G N + EA
Sbjct: 128 AGTHGKTTTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGSSRILIAEA 178
Query: 239 DEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQC 297
DE D FL L P V++VTN++ +H+D + D + +K F FL + G V+C D
Sbjct: 179 DESDASFLHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAVMCVDDPV 238
Query: 298 ARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG 357
R L+ Q+ + ++ITYGFS D E+ Q G
Sbjct: 239 VRELIPQVSR-------------------------QVITYGFSEDADIRIENYVQEGQQG 273
Query: 358 SDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFM 417
+ + G+ I+L IPG HN LN+ A IA + S E+I LK ++
Sbjct: 274 K-FTVVREGKANLDITLNIPGRHNALNASAAIAVAT----EDDISDEAI--LK-AMAGTE 325
Query: 418 GVSRRFDLIG---TIYG-CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRL 473
G RRFD +G T G + DD+ HHPTEV +QAAR + +K L+ +FQPH YSR
Sbjct: 326 GTGRRFDHLGEYETGKGVAMLVDDYGHHPTEVDVTIQAARSGWTDKRLVMIFQPHRYSRT 385
Query: 474 VVLKDDFANALSEADQVVV 492
L DDFAN L + D +++
Sbjct: 386 RDLYDDFANVLEQVDVLIL 404
>gi|359300324|ref|ZP_09186163.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus
[parainfluenzae] CCUG 13788]
Length = 475
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 151/472 (31%), Positives = 239/472 (50%), Gaps = 68/472 (14%)
Query: 61 FKRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAG 120
F+ + +V R IHF+GIGG+G+S +A++ L +G+++SGSD+ S+ + L +AG
Sbjct: 4 FQDKIKKLVPEMRRVNQIHFIGIGGAGMSGIAEVLLNEGYKISGSDIAESAVTQRLAKAG 63
Query: 121 ANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEK 180
A + IGH+ N QG + VVASSAI N E+ AK+ +P+ +R LA++
Sbjct: 64 ATVFIGHAAENTQG------ASVVVASSAIDDSNPEVAAAKAARIPVIQRAQMLAEIMRF 117
Query: 181 YNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN------- 233
+ IAV+G+HGK+TT +M++ + D P F +G + GKN
Sbjct: 118 RHGIAVAGTHGKTTTTAMISMIYTEAKLD---------PTFVNGGLVKSAGKNAHLGASR 168
Query: 234 -FVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVI 291
+ EADE D FL L P V+VVTN++ +H+D + D + +K+ + +FL+ + G V+
Sbjct: 169 YLIAEADESDASFLHLQPMVSVVTNIEPDHMDTYGGDFEKMKATYVKFLRNLPFYGLAVM 228
Query: 292 CGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVC 351
C D + + Q+ + +++TYGFS D+ E
Sbjct: 229 CADDETVMEIAPQVGR-------------------------QVMTYGFSEKADYRIEDYQ 263
Query: 352 PNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKL 411
G ++C G + + L +PG HN LN+ A +A K + E+ A L
Sbjct: 264 QTGFQGHYTVVCPTGERI-DVLLNVPGKHNALNATAALAVA------KEEGIENEAILA- 315
Query: 412 PLSKFMGVSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQP 467
L+ F G RRFD +G+ + DD+ HHPTEV ++AARQ + K ++ VFQP
Sbjct: 316 ALADFQGAGRRFDQLGSFIRPNGKVMLVDDYGHHPTEVDVTIKAARQGWEGKRVVMVFQP 375
Query: 468 HTYSRLVVLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
H YSR L DDF LS+ D +V+ L ++A ++ A + +C
Sbjct: 376 HRYSRTRDLFDDFVQVLSQVDALVM-------LEVYAAGEAPIVGADSKSLC 420
>gi|427713053|ref|YP_007061677.1| UDP-N-acetylmuramate--L-alanine ligase [Synechococcus sp. PCC 6312]
gi|427377182|gb|AFY61134.1| UDP-N-acetylmuramate--L-alanine ligase [Synechococcus sp. PCC 6312]
Length = 498
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 146/426 (34%), Positives = 224/426 (52%), Gaps = 48/426 (11%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANL---HIGHSVSNIQGN 135
HF+GIGG G+SALA + +KQ F VSGSDL ++ L G + ++++
Sbjct: 19 HFIGIGGIGMSALAYILVKQKFAVSGSDLRATNLTHQLQSMGVTFFECQVAENLTDYPAR 78
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
G R V+ S+AI ++N E A+++G PI+ R LA L E+ IAV+G+HGK+TT
Sbjct: 79 TGHRQLPQVICSTAIGENNPEFQAAQALGCPIFHRSDILAALIERSQGIAVAGTHGKTTT 138
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
+SM+ YVL G D T +VG V + G+ G G + V EADE DG SP + V+
Sbjct: 139 SSMVGYVLLEGGLDPTIVVGGEVAAW-HGNARIGDGPHLVAEADESDGSLQKFSPRLGVI 197
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN++ +H D ++ + V +IF +F +Q + LV+C D R + + + + YS
Sbjct: 198 TNIELDHPDHYQTLEQVVAIFAQFAQQSQ---GLVVCWDCPTVR---EHLNHENLITYS- 250
Query: 316 GVVSNQSSDLWGQGHDYKI--ITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQIS 373
+S +S G DY + + YG + G+ + ERG+ L +
Sbjct: 251 --LSRES------GADYTVDHVQYGAN----------------GTTAHVSERGKSLGILQ 286
Query: 374 LQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH 433
L++ G HN+ N+LA IA R A + L+KF G RRF+ G G
Sbjct: 287 LKLLGPHNLQNALAAIAV-------GRDVGLDFATISAALAKFEGARRRFEERGQANGVR 339
Query: 434 IYDDFAHHPTEVRAVLQAARQRF----PNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
DD+AHHP+E++ LQA R + P + L+AVFQPH +SR + ++F+ + AD
Sbjct: 340 FIDDYAHHPSEIQVTLQAGRLQVGHDQPWRRLVAVFQPHRFSRTLTFLEEFSQSFQAADV 399
Query: 490 VVVSAV 495
VV++ +
Sbjct: 400 VVITDI 405
>gi|395497064|ref|ZP_10428643.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas sp. PAMC 25886]
gi|395796139|ref|ZP_10475438.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas sp. Ag1]
gi|421142255|ref|ZP_15602231.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas fluorescens
BBc6R8]
gi|395339777|gb|EJF71619.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas sp. Ag1]
gi|404506649|gb|EKA20643.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas fluorescens
BBc6R8]
Length = 481
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 155/428 (36%), Positives = 217/428 (50%), Gaps = 47/428 (10%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG G+ +A++ L G++VSGSDL S E L GA + IGH N
Sbjct: 15 RIRRIHFVGIGGVGMCGIAEVLLNLGYQVSGSDLKMSPVTERLESFGAKIFIGHRAENAA 74
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
D +V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+
Sbjct: 75 EAD------VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKT 128
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S++A V A G D T ++G + + G + + EADE D FL L P VA
Sbjct: 129 TTTSLIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVA 187
Query: 254 VVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
VVTN+D +H+ ++ D + +K F FL + G V+C D R +L +K+ T
Sbjct: 188 VVTNIDADHMATYDGDFNKLKKTFVEFLHNLPFYGLAVVCLDDPVVREILPLVKRPT--- 244
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER-GRPLAQ 371
+TYGFS D A +V QG + R R
Sbjct: 245 ----------------------VTYGFSEDCDVRAINV--RQQGMQTFFTVLRPDREPLD 280
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY- 430
+S+ +PG HNVLNSLA I + D+ S E+I LS F GV RRF + G +
Sbjct: 281 VSVNMPGNHNVLNSLATIC----IASDEGVSDEAIV---EGLSGFAGVGRRFQVYGELPV 333
Query: 431 ---GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ DD+ HHPTEV AV++A R +P + L+ V+QPH YSR L DDF N L++A
Sbjct: 334 DGGNVMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVNVLADA 393
Query: 488 DQVVVSAV 495
+ +++ V
Sbjct: 394 NVLLLMEV 401
>gi|291557260|emb|CBL34377.1| UDP-N-acetylmuramate--L-alanine ligase [Eubacterium siraeum
V10Sc8a]
Length = 461
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 144/428 (33%), Positives = 225/428 (52%), Gaps = 40/428 (9%)
Query: 70 DFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSV 129
DF K +HF+GIGGSG+ LA++ +GF ++GSD + ++ + G +++G
Sbjct: 3 DFLTGKKHVHFIGIGGSGMYPLAQILHSKGFYLTGSDNNETETLKAVRNMGIPVYMGQRA 62
Query: 130 SNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYN-LIAVSG 188
NI+G D +V ++AI DN E++ AK+ GV +R L +T YN + VSG
Sbjct: 63 ENIEGAD------LIVYTAAIMSDNPELIAAKASGVKTVERCELLGLVTSWYNKAVCVSG 116
Query: 189 SHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGL 248
+HGK+TT+SML ++ A DL+ ++G + GS G V EA E+ FL L
Sbjct: 117 THGKTTTSSMLTHMYLAQNVDLSTVIGGKLKAIG-GSGRAGSSDVMVCEACEFSNTFLHL 175
Query: 249 SPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQD 308
P+++++ N+D +H+D F+ D +++ F +F LV+ GD +
Sbjct: 176 FPNISIILNIDADHLDFFKTMDNLRASFTKFCDNTT--DILVVNGDDE------------ 221
Query: 309 TGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP 368
N + G D +IIT+G + N +Y E++ +D+ L E G
Sbjct: 222 -----------NTMRAVKASGFDKQIITFGKTDKNRYYPENIKRISDFQTDFDLMENGSK 270
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
+ +IS+ +PG HNVLN++A A L + + + LS F G RRF+ + T
Sbjct: 271 IERISIHVPGAHNVLNAVAACAAAL-------ATGVTPENINKGLSTFWGAGRRFERLAT 323
Query: 429 IYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
I G + DD+AHHP EV A L+ A+ K + AV QP TYSR L DDFA+AL AD
Sbjct: 324 IGGITVVDDYAHHPAEVAATLKTAKAMQDFKRVWAVHQPFTYSRTYTLMDDFASALEIAD 383
Query: 489 QVVVSAVL 496
+VV++ ++
Sbjct: 384 KVVLTEIM 391
>gi|95930730|ref|ZP_01313463.1| UDP-N-acetylmuramate--alanine ligase [Desulfuromonas acetoxidans
DSM 684]
gi|95133210|gb|EAT14876.1| UDP-N-acetylmuramate--alanine ligase [Desulfuromonas acetoxidans
DSM 684]
Length = 456
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 148/418 (35%), Positives = 223/418 (53%), Gaps = 42/418 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+S +A++ L G+EVSGSDL S L G ++ GH+ N+Q
Sbjct: 8 IHFVGIGGIGMSGIAEVLLNLGYEVSGSDLRASELTRRLESLGGRVNYGHAAENVQE--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV S+A+ DN E++ A + VP+ R LA+L IAV+G+HGK+TT S
Sbjct: 65 ---AQVVVTSTAVSSDNPEVVEAHRLLVPVIPRAEMLAELMRLKYGIAVAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A +L G D TA+VG + + G G+ V+EADE DG FL L+P++AVVTN
Sbjct: 122 MVATLLSHGGIDPTAVVGGRLNALGSNAKL-GQGEFMVVEADESDGSFLKLTPTIAVVTN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D +H+D + D ++ +F F+ +I G V+C D ++LL Q+++
Sbjct: 181 IDEDHLDYYSGMDEIRGVFLDFINKIPFYGLAVLCLDDANIQTLLPQVQK---------- 230
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
+ +TYG + D+ A + + GG+++ + R L +I L++P
Sbjct: 231 ---------------RYVTYGLTPQADFSATEI-EHRAGGTEFTVHFRQEKLGRIRLEMP 274
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD 437
G HNVLN+LA +A R+ + + F GV RRF I + DD
Sbjct: 275 GRHNVLNALASLAVA-------RELDVPMKTICEGFESFAGVQRRFQ-IKLDDEVMVVDD 326
Query: 438 FAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
+ HHP E++A L AAR + ++ ++ +FQPH YSR L DDF A +AD ++V V
Sbjct: 327 YGHHPAEIKATLSAARNGW-DRRVVVIFQPHRYSRTQALFDDFVTAFYQADVLLVMDV 383
>gi|423348845|ref|ZP_17326501.1| hypothetical protein HMPREF9156_00039 [Scardovia wiggsiae F0424]
gi|393703074|gb|EJD65275.1| hypothetical protein HMPREF9156_00039 [Scardovia wiggsiae F0424]
Length = 539
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 162/454 (35%), Positives = 241/454 (53%), Gaps = 56/454 (12%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G HFVGIGG+G+S LA++ L+ G +VSGSD ++ E L GA ++IG S N+
Sbjct: 21 GRTHFVGIGGAGMSVLAEMLLENGVDVSGSDREANTKTERLKTLGARIYIGQSAGNVHDA 80
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKST 194
D VV SSAI DN EI+ A+ G + R LA L +K+ + V+G+HGK+T
Sbjct: 81 D------TVVWSSAIKPDNPEIIAARECGALLLHRSDILALLMQKHQYAVTVAGAHGKTT 134
Query: 195 TASMLAYVLKAMGD----DLTAIVGAHVPQFPDGSI---FYGGGKNFVLEADEYDGCFLG 247
T++MLA +L A G+ D + VG + + P GSI G G+ FV EADE DG F
Sbjct: 135 TSAMLAQILAAQGEGNLKDPSFAVGGSI-RTPRGSIDGGHAGTGEAFVAEADESDGSFEK 193
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI-- 305
P +AV+TN++ +H+D + DA + F + ++V+CGD + A S+L +
Sbjct: 194 YHPYIAVITNVEPDHLDHYGSADAFMAAFAEHAHHAQ--KYVVLCGDDEGALSVLASMGE 251
Query: 306 -----------KQDTGLKYSGGVV-----SNQSSDLWGQGHDY---KIITYGFSSFNDWY 346
+Q LK S + N++++ G G+D K ++ F+ +
Sbjct: 252 EASRHCVVYTARQSIDLKGSHALRVLITNENETAEKGGTGNDRTGSKALSVAAERFSLMF 311
Query: 347 AESVCP----NVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQS 402
S+ P N GG D + + L++PG+HN N+ A I + + L+G Q
Sbjct: 312 PSSLIPEMYRNKDGGGDTRTFD-------VKLRVPGIHNARNAAAAIISAV-LMGMDPQK 363
Query: 403 HESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALI 462
S A +F G RRF++ GT G + DD+AHHPTE+ A+L AA++RFP A+
Sbjct: 364 ACSAAF------EFYGAKRRFEIRGTEDGVTVIDDYAHHPTEIEALLHAAKRRFPQSAIH 417
Query: 463 AVFQPHTYSRLVVLKDDFANALSEADQVVVSAVL 496
+FQPH +SR FA+ALS AD VVV+ +
Sbjct: 418 VIFQPHLFSRTHFFAQQFADALSIADDVVVTDIF 451
>gi|421867587|ref|ZP_16299245.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia cenocepacia
H111]
gi|358072525|emb|CCE50123.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia cenocepacia
H111]
Length = 465
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 148/425 (34%), Positives = 217/425 (51%), Gaps = 48/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ + G+ VSGSDL ++ + L GA + IGH +NI+G
Sbjct: 8 IHFVGIGGAGMSGIAEVLVNLGYAVSGSDLSRNAVTDRLEALGARIAIGHDAANIEG--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
NAVV S+A+ DN E+L A++ VPI +R LA+L IA++G+HGK+TT S
Sbjct: 65 ---ANAVVVSTAVRSDNPEVLAARAKRVPIVQRAVMLAELMRLKQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL A G D T ++G + + G G V EADE D FL L P + V+TN
Sbjct: 122 LVASVLAAGGLDPTFVIGGRLIS-AGANARLGTGDFIVAEADESDASFLNLYPVIEVITN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D +K F F +++ G V+C D R ++ I +
Sbjct: 181 IDADHMDTYGHDFARLKQAFIEFTQRLPFYGSAVVCVDDPNVRQIIPFISK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++ YG S AE + G + + GR + L +
Sbjct: 232 ----------------PVVRYGLSPDAQVRAEDIDAR-DGRMHFTVIREGRAPLAVVLNM 274
Query: 377 PGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH-- 433
PG+HNV N+LA IA L + D ++L L++F GV RRF G +
Sbjct: 275 PGLHNVQNALAAIAIATDLGVSDD--------AIQLALAEFNGVGRRFQRYGEVASADGG 326
Query: 434 ---IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP E+ A + AAR FP + L+ FQPH Y+R DDF N LS D +
Sbjct: 327 QYTLIDDYGHHPVEMAATIAAARGAFPGRRLVLAFQPHRYTRTRDCFDDFVNVLSTVDAL 386
Query: 491 VVSAV 495
V++ V
Sbjct: 387 VLTEV 391
>gi|320106156|ref|YP_004181746.1| UDP-N-acetylmuramate--L-alanine ligase [Terriglobus saanensis
SP1PR4]
gi|319924677|gb|ADV81752.1| UDP-N-acetylmuramate/alanine ligase [Terriglobus saanensis SP1PR4]
Length = 454
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 150/422 (35%), Positives = 219/422 (51%), Gaps = 40/422 (9%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
F + + +HF+GIGG G+S +A++ L G+ VSGSDL ++ E L GA + +GH +
Sbjct: 2 FASGQQRVHFIGIGGIGMSGIAEILLTMGYPVSGSDLRSNAVTERLQGMGAKIFLGHDAA 61
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N +R + +V SSA+ + N E++ A+S PI R LA+L IA++G H
Sbjct: 62 N------ARDADVIVTSSAVAKSNPEVVEARSRKTPIIHRAEMLAELMRLKYGIAIAGMH 115
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT SM+A VL G D T +VG V + G + V EADE D FL LSP
Sbjct: 116 GKTTTTSMVASVLAGGGLDPTVVVGGRVNALGSNARL-GNSRYLVAEADESDRSFLKLSP 174
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
+AVVTNLD EH+D + D V++ F F+ ++ G C D R++L ++++
Sbjct: 175 ILAVVTNLDREHMDAYRDMADVETAFVEFMDRVPFYGATTACIDDPMLRAILPRVRR--- 231
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
+++TYG S D+ + + + + + +G L
Sbjct: 232 ----------------------RVMTYGESPDADFQLRMLPKDSDCHAVFEVNTKGLLLG 269
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
L +PG HNVLN+ A +A + L Q E L F GV RRF + G +
Sbjct: 270 PFRLHVPGKHNVLNATAAVAIGVELGIAPSQIAEG-------LEAFRGVDRRFQVKGVVR 322
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
G + DD+ HHPTEVRA LQAAR+ + L+ +FQPH YSR L ++FA A +AD V
Sbjct: 323 GVTVVDDYGHHPTEVRATLQAARECGYGRVLV-LFQPHRYSRTAELMEEFATAFGDADLV 381
Query: 491 VV 492
V
Sbjct: 382 EV 383
>gi|372269621|ref|ZP_09505669.1| UDP-N-acetylmuramate--L-alanine ligase [Marinobacterium stanieri
S30]
Length = 487
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 141/411 (34%), Positives = 214/411 (52%), Gaps = 50/411 (12%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L QG++++GSD+ S+ + L GA + IGH+ NI D
Sbjct: 22 IHFVGIGGVGMCGIAEVLLNQGYDITGSDIRPSATTDRLEALGAGIFIGHAEGNIAEAD- 80
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV S+A+ +DN E+ A+ +P+ +R LA+L + IAV+G+HGK+TT S
Sbjct: 81 -----VVVTSTAVKEDNPEVASARERRIPVVRRAEMLAELMRYRHGIAVAGTHGKTTTTS 135
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A ++ D T ++G + + GG + V EADE D FL L P VA+VTN
Sbjct: 136 LMASIMAEAELDPTFVIGGRLNSAGTNAQL-GGSRYLVAEADESDASFLHLQPMVAIVTN 194
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D +K F FL + G V+C D R +L ++ +
Sbjct: 195 IDADHMDTYGGDFGKLKQTFVSFLHNLPFYGLAVLCTDDPVVREILPEVSR--------- 245
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYA-ESVCPNVQGGSDYILCERGRPLAQISLQ 375
++TYGF D+ A E +Q + +PL Q+ L
Sbjct: 246 ----------------PVLTYGFHEGADYQAVELEQAGMQTRFKVLRPGNLKPL-QVCLN 288
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESI--ACLKLPLSKFMGVSRRFDLIGTIY--- 430
+PG HNVLN+LA IA S E I ++ L KF GV RRF ++G +
Sbjct: 289 MPGRHNVLNALACIAVA---------SDEGIDDGAIERALEKFEGVGRRFQVLGELPVDG 339
Query: 431 -GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
+ DD+ HHPTEV+AV++A R+ +P + L+ + QPH Y+R L +DF
Sbjct: 340 GSVTLVDDYGHHPTEVQAVIKAIREGWPERRLVMIHQPHRYTRTRDLYEDF 390
>gi|107100004|ref|ZP_01363922.1| hypothetical protein PaerPA_01001025 [Pseudomonas aeruginosa PACS2]
gi|296391120|ref|ZP_06880595.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa
PAb1]
gi|392985975|ref|YP_006484562.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa DK2]
gi|416859401|ref|ZP_11913832.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa
138244]
gi|416876470|ref|ZP_11919275.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa
152504]
gi|418583950|ref|ZP_13148016.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa
MPAO1/P1]
gi|418589676|ref|ZP_13153597.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa
MPAO1/P2]
gi|419751957|ref|ZP_14278366.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa
PADK2_CF510]
gi|421518964|ref|ZP_15965637.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa
PAO579]
gi|334838470|gb|EGM17189.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa
138244]
gi|334840748|gb|EGM19394.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa
152504]
gi|375046429|gb|EHS38990.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa
MPAO1/P1]
gi|375051532|gb|EHS43999.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa
MPAO1/P2]
gi|384401534|gb|EIE47888.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa
PADK2_CF510]
gi|392321480|gb|AFM66860.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa DK2]
gi|404346369|gb|EJZ72719.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa
PAO579]
gi|453046251|gb|EME93968.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa
PA21_ST175]
Length = 469
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 156/425 (36%), Positives = 218/425 (51%), Gaps = 49/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+ +A++ L G+EVSGSDL S+ E L + GA + IGH N G D
Sbjct: 7 IHFVGIGGAGMCGIAEVLLNLGYEVSGSDLKASAVTERLEKFGAQIFIGHQAENADGAD- 65
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSAI + N E+ A +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 66 -----VLVVSSAINRANPEVASALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTS 120
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A V A G D T ++G + + G + V EADE D FL L P VAVVTN
Sbjct: 121 LIASVFAAGGLDPTFVIGGRLNAAGTNAQL-GASRYLVAEADESDASFLHLQPMVAVVTN 179
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ + D + +K F FL + G V+C D R +L QI + T
Sbjct: 180 IDADHMATYGGDFNKLKKTFVEFLHNLPFYGLAVMCVDDPVVREILPQIARPT------- 232
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+TYG S D A ++ +L PL +S+ +
Sbjct: 233 ------------------VTYGLSEDADVRAINIRQEGMRTWFTVLRPEREPL-DVSVNM 273
Query: 377 PGVHNVLNSLA--VIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY---- 430
PG+HNVLNSLA VIAT D+ S E+I LS F GV RRF + G +
Sbjct: 274 PGLHNVLNSLATIVIAT------DEGISDEAIVQ---GLSGFQGVGRRFQVYGELQVEGG 324
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP EV AV++A R +P + L+ V+QPH Y+R L +DF L EA+ +
Sbjct: 325 SVMLVDDYGHHPREVAAVIKAIRGGWPERRLVMVYQPHRYTRTRDLYEDFVQVLGEANVL 384
Query: 491 VVSAV 495
++ V
Sbjct: 385 LLMEV 389
>gi|398951324|ref|ZP_10673972.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM33]
gi|398156711|gb|EJM45125.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM33]
Length = 486
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 153/424 (36%), Positives = 215/424 (50%), Gaps = 47/424 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G+ VSGSDL S E L GA + IGH N D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYAVSGSDLKASPVTERLESFGAQIFIGHRAENAAAAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 78 -----VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ ++ D + +K F FL + G V+C D R +L Q+K+ T
Sbjct: 192 IDADHMATYDGDFNKLKKTFVEFLHNLPFYGLAVVCLDDPVVREILPQVKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER-GRPLAQISLQ 375
+TYGF D A +V QG + R R +S+
Sbjct: 245 ------------------VTYGFGEDCDVRAINV--RQQGMQTFFTVLRPDREPLDVSVN 284
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----G 431
+PG HNVLN+LA I + D+ S E+I LS F GV RRF + G +
Sbjct: 285 MPGNHNVLNALATIC----IATDEGVSDEAIV---QGLSGFQGVGRRFQVYGELPVDDGN 337
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+ HHPTEV AV++A R +P + L+ V+QPH YSR L DDF N L++A+ ++
Sbjct: 338 VMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVNVLADANVLL 397
Query: 492 VSAV 495
+ V
Sbjct: 398 LMEV 401
>gi|227874167|ref|ZP_03992371.1| UDP-N-acetylmuramate--L-alanine ligase [Oribacterium sinus F0268]
gi|227839988|gb|EEJ50414.1| UDP-N-acetylmuramate--L-alanine ligase [Oribacterium sinus F0268]
Length = 466
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 142/420 (33%), Positives = 215/420 (51%), Gaps = 40/420 (9%)
Query: 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGND 136
W+HF+GIGG +S LA++ L + F V+GSD S E L G + + S NIQ D
Sbjct: 11 WVHFIGIGGISMSGLAEILLDRHFTVTGSDAKTSPLTEHLESLGIKVFVPQSRQNIQ--D 68
Query: 137 GSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKSTT 195
G V ++AI +DN E K G+P+ R L ++ + Y I V+G+HGK+TT
Sbjct: 69 GVEL---CVYTAAISEDNEEFQEVKRRGIPMMTRADLLGRIMQNYATAINVAGTHGKTTT 125
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+ +L D T VG + G++ G F+ EA EY F PS+AV+
Sbjct: 126 TSMIGEILMEAAKDPTITVGGMMKDI-GGNLRVGQSDIFLAEACEYTNSFHSFFPSIAVI 184
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
N++ +H+D F+D + ++ F+ F++++ G +VI D L+
Sbjct: 185 LNVEADHLDFFKDINEIRDSFKTFIERLPEDGLVVINKDIPHYEYFLE------------ 232
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQ 375
DL G+ KIIT+G D+ A + + + L E G +++L
Sbjct: 233 --------DLGGR----KIITFGHGD-ADYTANFISYDHYARPSFTLFEHGEDRGKVTLS 279
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
+ G HN+ NSL+ IA R S +K L +F G RRF G I G I
Sbjct: 280 VTGEHNIYNSLSAIAVA-------RYLGISFEDIKEALHRFSGTDRRFQRKGKINGFTII 332
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHP E+ A + AA Q++P++ L VFQPHTYSR L +DFA AL++AD+++++ +
Sbjct: 333 DDYAHHPQEIAATIAAA-QKYPHRKLWIVFQPHTYSRTKALMEDFAGALAQADEIILADI 391
>gi|221213276|ref|ZP_03586251.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia multivorans
CGD1]
gi|221166728|gb|EED99199.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia multivorans
CGD1]
Length = 465
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 148/425 (34%), Positives = 217/425 (51%), Gaps = 48/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ + G++VSGSDL ++ + L GA + IGH +NI+G
Sbjct: 8 IHFVGIGGAGMSGIAEVLVNLGYQVSGSDLARNAVTDRLAALGARIAIGHDAANIEG--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
NAVV S+A+ DN E+L A++ VPI +R LA+L IA++G+HGK+TT S
Sbjct: 65 ---ANAVVVSTAVRSDNPEVLAARAQRVPIVQRAVMLAELMRLKQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL A G D T ++G + + G G V EADE D FL L P + V+TN
Sbjct: 122 LVASVLAAGGLDPTFVIGGRLIS-AGANARLGTGDFIVAEADESDASFLNLYPVIEVITN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D +K F F +++ G V+C D R ++ I +
Sbjct: 181 IDADHMDTYGHDFARLKQAFIEFTQRLPFYGSAVVCVDDPNVRQIIPFISK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++ YG S AE + G + + GR + L +
Sbjct: 232 ----------------PVVRYGLSPDAQVRAEDIDAR-DGRMHFTVIREGRAPLAVVLNL 274
Query: 377 PGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH-- 433
PG+HNV N+LA IA L + D ++ L++F GV RRF G +
Sbjct: 275 PGLHNVQNALAAIAIATDLGVSDD--------AIQQALAEFNGVGRRFQRYGDVPTADGG 326
Query: 434 ---IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP E+ A + AAR FP + LI FQPH Y+R DDF N LS D +
Sbjct: 327 RYTLIDDYGHHPVEMAATIAAARGAFPGRRLILAFQPHRYTRTRDCFDDFVNVLSTVDAL 386
Query: 491 VVSAV 495
V++ V
Sbjct: 387 VLTEV 391
>gi|408418662|ref|YP_006760076.1| UDP-N-acetylmuramate-L-alanine ligase MurC [Desulfobacula toluolica
Tol2]
gi|405105875|emb|CCK79372.1| MurC: UDP-N-acetylmuramate-L-alanine ligase [Desulfobacula
toluolica Tol2]
Length = 455
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 152/416 (36%), Positives = 227/416 (54%), Gaps = 42/416 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+S +A+L L G++VSGSDL S L E G + GHS + G
Sbjct: 8 IHFVGIGGIGMSGIAELLLHLGYKVSGSDLKLSPITRRLEENGGIIFQGHSKEQVAG--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ VV SSAI ++N E++ AK + VPI R LA+L IAVSG+HGK++T S
Sbjct: 65 ---ASVVVTSSAISRENPEVIRAKELSVPIIPRAEMLAELMRIKYSIAVSGAHGKTSTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A +L G D T I+G + D + +G G+ + EADE DG FL SP++A VTN
Sbjct: 122 MIAQILNTAGLDPTVIIGGLLKGL-DTNALHGKGEYIIAEADESDGSFLKYSPAIAAVTN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D EH+D ++D + +K+ F +F+ + G V+C D++ + +L +I ++Y+
Sbjct: 181 IDLEHLDFYKDIEDIKNNFVQFINSVPFYGLAVLCLDNEHIQDILPRI----NVRYTTYG 236
Query: 318 VSNQSSDLWGQGHDYKIITYGFSS-FNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++ Q SDL + +I +G S F +Y E+ L +ISL +
Sbjct: 237 MTAQ-SDLQAR----EIFFHGSKSIFQVFYHEN------------------HLGEISLNL 273
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
G HN+ N+LA IAT L L + +K L + GV RR ++ G + D
Sbjct: 274 AGSHNISNALAAIATALEL-------NIPFKTVKEALEQIEGVKRRLEIKGKKKEIMVMD 326
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
D+ HHPTE+ A L A R+ + +K LI VFQPH Y+R L +F + ++D ++V
Sbjct: 327 DYGHHPTEIMATLTAIRKSYKDKRLIVVFQPHRYTRTQGLFHEFTRSFYQSDILIV 382
>gi|386390111|ref|ZP_10074907.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus
paraphrohaemolyticus HK411]
gi|385693795|gb|EIG24427.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus
paraphrohaemolyticus HK411]
Length = 480
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 152/475 (32%), Positives = 238/475 (50%), Gaps = 72/475 (15%)
Query: 60 TFKRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEA 119
F+ N + +V R IHF+GIGG+G+S +A++ L +G+++SGSD+ + L A
Sbjct: 8 NFQDNIKKLVPEMRRVSQIHFIGIGGAGMSGIAEVLLNEGYKISGSDIADGVVTKRLAAA 67
Query: 120 GANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE 179
GA++ IGHS NI G + VVASSAI ++N E+ AK +P+ +R LA++
Sbjct: 68 GAHIFIGHSAENISG------ASVVVASSAINEENPEVKAAKEARIPVIQRAQMLAEIMR 121
Query: 180 KYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN------ 233
+ IA++G+HGK+TT +M++ + G D P F +G + GKN
Sbjct: 122 FRHGIAIAGTHGKTTTTAMISMIYTEAGLD---------PTFVNGGLVKSAGKNAHLGAS 172
Query: 234 --FVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLV 290
V EADE D FL L P V+VVTN++ +H+D + D + +K + +FL+ + G V
Sbjct: 173 RYLVAEADESDASFLHLQPMVSVVTNIEPDHMDTYGGDFEKMKETYVKFLRNLPFYGLAV 232
Query: 291 ICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESV 350
+C D + ++ + ++ITYGFS D+ E
Sbjct: 233 MCADDATVMEIAPKVGR-------------------------QVITYGFSENADYRIEDY 267
Query: 351 CPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIA--C 408
G ++C G + ++ L +PG HN LN+ A +A E IA
Sbjct: 268 QQTGFQGHYTVICPNGERV-EVLLNVPGRHNALNATAALAVA---------KEEGIANEA 317
Query: 409 LKLPLSKFMGVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAV 464
+ L+ F G RRFD +G+ + + DD+ HHPTEV ++AARQ + K ++ V
Sbjct: 318 ILAALADFQGAGRRFDQLGSFIRPNGKVMLVDDYGHHPTEVDVTIKAARQGWEGKRVVMV 377
Query: 465 FQPHTYSRLVVLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
FQPH YSR L DDF LS+ D +V+ L ++A ++ A + +C
Sbjct: 378 FQPHRYSRTRDLFDDFVQVLSQVDALVM-------LDVYAAGEAPIVGADSKALC 425
>gi|398915515|ref|ZP_10657364.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM49]
gi|398176284|gb|EJM64009.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM49]
Length = 486
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 153/424 (36%), Positives = 215/424 (50%), Gaps = 47/424 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G+ VSGSDL S E L GA + IGH N D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYAVSGSDLKASPVTERLESFGAQIFIGHRAENAAAAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 78 -----VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ ++ D + +K F FL + G V+C D R +L Q+K+ T
Sbjct: 192 IDADHMATYDGDFNKLKKTFVEFLHNLPFYGLAVVCLDDPVVREILPQVKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER-GRPLAQISLQ 375
+TYGF D A +V QG + R R +S+
Sbjct: 245 ------------------VTYGFGEDCDVRAINV--RQQGMQTFFTVLRPDREPLDVSVN 284
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----G 431
+PG HNVLN+LA I + D+ S E+I LS F GV RRF + G +
Sbjct: 285 MPGNHNVLNALATIC----IATDEGVSDEAIV---QGLSGFQGVGRRFQVYGELPVDGGN 337
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+ HHPTEV AV++A R +P + L+ V+QPH YSR L DDF N L++A+ ++
Sbjct: 338 VMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVNVLADANVLL 397
Query: 492 VSAV 495
+ V
Sbjct: 398 LMEV 401
>gi|331268329|ref|YP_004394821.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium botulinum
BKT015925]
gi|329124879|gb|AEB74824.1| UDP-N-acetylmuramate--alanine ligase [Clostridium botulinum
BKT015925]
Length = 458
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 140/430 (32%), Positives = 231/430 (53%), Gaps = 51/430 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K+ IHF+GIGG +S LA++ L ++VSGSD S + L+E GA ++IGH+
Sbjct: 6 LKDNNKKIHFIGIGGISMSGLAEILLNSNYKVSGSDRSESELTKHLIEKGAEIYIGHNKD 65
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAVSG 188
NI+ D VV ++AIP N E++ A + +P R +L + + KYN IA+SG
Sbjct: 66 NIKDVD------LVVYTAAIPDSNPELVRAHELQIPTMDRAEFLGHVMQGHKYN-IAISG 118
Query: 189 SHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGL 248
+HGK+TT SML+++ + D T +VG ++ +G++ G FV EA EY FL
Sbjct: 119 THGKTTTTSMLSHITLSANLDPTILVGGNLDVI-NGNVRVGNSDYFVTEACEYKASFLKF 177
Query: 249 SPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQD 308
P + ++ N++ +H+D ++D + +++ F +F K I G L++ D + ++ ++
Sbjct: 178 YPYIGIILNIEADHLDFYKDINDIQNTFLKFAKLIPKDGFLIVNADDERCLAVSKEV--- 234
Query: 309 TGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQ---GGSDYILCER 365
D ++T+G ++ E N++ G + +
Sbjct: 235 ----------------------DCNVMTFGINN-----GEVRAKNIEFNNGRPTFDVYRN 267
Query: 366 GRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
L ++L +PG HN+L+SLA I+ L+L D E LS F G RRF++
Sbjct: 268 DTKLFSLTLNVPGNHNILDSLASISASLSLNVDTDSIIEG-------LSTFYGAHRRFEI 320
Query: 426 IGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
G + G + DD+AHHPTE++A L AA+ FP+ +I +FQPHTYSR + L DDFA++
Sbjct: 321 KGELNGITVVDDYAHHPTEIKAALNAAKN-FPHNRIICIFQPHTYSRTISLFDDFADSFF 379
Query: 486 EADQVVVSAV 495
AD ++++ +
Sbjct: 380 NADTLILADI 389
>gi|91762846|ref|ZP_01264811.1| UDP-N-acetylmuramate--L-alanine ligase [Candidatus Pelagibacter
ubique HTCC1002]
gi|91718648|gb|EAS85298.1| UDP-N-acetylmuramate--L-alanine ligase [Candidatus Pelagibacter
ubique HTCC1002]
Length = 464
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 141/423 (33%), Positives = 216/423 (51%), Gaps = 44/423 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+S LA + + GF V GSD++ + +E L + + I H+ NI
Sbjct: 11 IHFVGIGGIGMSGLALIMKRMGFNVQGSDVLGNKNIERLKKDKIKITISHTKKNIAK--- 67
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSAI +N E++ AK +PIYKR LA + I V+GSHGK+TT S
Sbjct: 68 ---ATIVVISSAIKNNNPELIEAKLKQLPIYKRGEMLANIVSLTKNIVVTGSHGKTTTTS 124
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+LA + D T I G + + + G +LEADE DG F+ + P+ ++VTN
Sbjct: 125 LLASIFSKTKLDPTIINGGVLNAIKNSAKL-GKSDWCILEADESDGSFIHVPPTYSIVTN 183
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D EH+D + +K +F +F+ ++ G IC D + + LL ++K
Sbjct: 184 IDREHMDFYNSMKDLKELFIKFINKVPSFGKSFICIDDKNNKDLLSKLKMKN-------- 235
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILC-----ERGRPLAQI 372
TYG + +++Y +++ + S Y L ++ + +I
Sbjct: 236 ----------------YYTYGTDNKSNFYIKNIKQEKEY-SQYDLAINLPGKKNLTIRKI 278
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC 432
L + G+HN+ NS A IA +T IG + +K L +F GV RRF+ I T
Sbjct: 279 KLPLLGIHNIRNSTAAIAVAVT-IGISQN------IIKKGLKEFKGVQRRFNKIFTHRET 331
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+ YDD+AHHPTE+R VL R + + +I +FQPH SRL LK +F+ + +AD V++
Sbjct: 332 NFYDDYAHHPTEIREVLNGVRAAYKKEEVICIFQPHRISRLKDLKKEFSLSFKKADVVIL 391
Query: 493 SAV 495
+
Sbjct: 392 CPI 394
>gi|86749119|ref|YP_485615.1| UDP-N-acetylmuramate--L-alanine ligase [Rhodopseudomonas palustris
HaA2]
gi|109892730|sp|Q2IYK6.1|MURC_RHOP2 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|86572147|gb|ABD06704.1| UDP-N-acetylmuramate--L-alanine ligase [Rhodopseudomonas palustris
HaA2]
Length = 468
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 155/429 (36%), Positives = 229/429 (53%), Gaps = 52/429 (12%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G+ V GSD S+ + L E G +H+GH N+ G
Sbjct: 8 GPIHFVGIGGIGMSGIAEVLCNLGYTVQGSDASESANVSRLREKGIQIHVGHKADNVAGA 67
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D +V S+AI +DN E+L A++ +P+ +R LA+L + +A++G+HGK+TT
Sbjct: 68 D------VLVVSTAIKRDNPELLAARAQRIPVVRRAEMLAELMRLKSCVAIAGTHGKTTT 121
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L A D T I G + + + G G V+EADE DG FL L VA+V
Sbjct: 122 TSMVAALLDAGDFDPTVINGGIINAYGTNARL-GAGDWMVVEADESDGTFLKLPADVAIV 180
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D F+ DAV+ FR F++ + G V+C D ++L+ +I+
Sbjct: 181 TNVDPEHLDHFKTFDAVQDAFRNFVENVPFYGFAVMCIDHPVVQALVGKIE--------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR------PL 369
D +IITYG + D + P+ GS + + R R +
Sbjct: 232 ---------------DRRIITYGENPQADARLLELKPS-GSGSTFKVAFRDRKAGTAHEI 275
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHE---SIACLKLPLSKFMGVSRRFDLI 426
A++ L +PG HN LN+ A IA +HE S ++ L+ F GV RRF
Sbjct: 276 AELMLPMPGRHNALNATAAIAV----------AHELGLSDDTIRKALAAFGGVRRRFTKT 325
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G G I DD+ HHP E+ AVL+AARQ + +IAV QPH ++RL L ++F ++
Sbjct: 326 GDWNGVTIIDDYGHHPVEIAAVLKAARQSTDGR-VIAVVQPHRFTRLQSLFEEFCTCFND 384
Query: 487 ADQVVVSAV 495
AD V+V+ V
Sbjct: 385 ADSVIVADV 393
>gi|405980420|ref|ZP_11038759.1| UDP-N-acetylmuramate-alanine ligase [Actinomyces turicensis
ACS-279-V-Col4]
gi|404390413|gb|EJZ85482.1| UDP-N-acetylmuramate-alanine ligase [Actinomyces turicensis
ACS-279-V-Col4]
Length = 462
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 145/425 (34%), Positives = 222/425 (52%), Gaps = 42/425 (9%)
Query: 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQG 134
+G HF+GIGG+G+S +A+L +G V+GSD S + L E G +GH +++
Sbjct: 5 EGHFHFIGIGGAGMSVVAELLAARGARVTGSDCADSDVLARLNEKGIRAFVGHDATHVDD 64
Query: 135 NDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKST 194
+ VV S+AI + N E+ A+ +G+ + R LA + V+G+HGK+T
Sbjct: 65 D------ATVVVSTAIRESNPELTRARELGLDVIHRSQALALAASGMRFVGVAGAHGKTT 118
Query: 195 TASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAV 254
T+ M+A L+ G D + VG VPQF G+ G FV EADE DG FL +PS+ V
Sbjct: 119 TSGMIAVGLRGAGLDPSVAVGGIVPQFGSGA-HLGTSDVFVAEADESDGSFLNYTPSIEV 177
Query: 255 VTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICG-DSQCARSLLDQIKQDTGLKY 313
VTN++ +H+D + +A +++F + K + GG LV C D+ AR L + ++ G++
Sbjct: 178 VTNVEPDHLDRYGTREAFEAVFVDYAKCLVPGGLLVCCAEDAGTAR--LSESARELGIR- 234
Query: 314 SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG--GSDYILCERGRPLAQ 371
++TYG S + A+ +V+ S G A+
Sbjct: 235 --------------------VVTYGRSDKSVVDADVTICDVETTPSSCRARVSYGDISAE 274
Query: 372 ISLQIPGVHNVLNSLAV-IATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+SL +PGVHN+LN++ IA V + + L+ F G +RRF+L GT+
Sbjct: 275 LSLGVPGVHNILNAVGAWIAGVELGV--------EPGLMASSLAGFTGTARRFELRGTVG 326
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
++DD+AHHPTEV A ++ AR + VFQPH YSR + D FA ALS AD V
Sbjct: 327 DRRVFDDYAHHPTEVSAAIEQARLVADGADVTVVFQPHLYSRTRLFADRFAKALSGADHV 386
Query: 491 VVSAV 495
V++ +
Sbjct: 387 VLADI 391
>gi|398869795|ref|ZP_10625152.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM74]
gi|398930639|ref|ZP_10664704.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM48]
gi|426411400|ref|YP_007031499.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas sp. UW4]
gi|398164949|gb|EJM53073.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM48]
gi|398210207|gb|EJM96859.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM74]
gi|426269617|gb|AFY21694.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas sp. UW4]
Length = 486
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 153/424 (36%), Positives = 215/424 (50%), Gaps = 47/424 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G+ VSGSDL S E L GA + IGH N D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYAVSGSDLKASPVTERLESFGAQIFIGHRAENAAAAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 78 -----VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ ++ D + +K F FL + G V+C D R +L Q+K+ T
Sbjct: 192 IDADHMATYDGDFNKLKKTFVEFLHNLPFYGLAVVCLDDPVVREILPQVKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER-GRPLAQISLQ 375
+TYGF D A +V QG + R R +S+
Sbjct: 245 ------------------VTYGFGEDCDVRAINV--RQQGMQTFFTVLRPDREPLDVSVN 284
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----G 431
+PG HNVLN+LA I + D+ S E+I LS F GV RRF + G +
Sbjct: 285 MPGNHNVLNALATIC----IATDEGVSDEAIV---QGLSGFQGVGRRFQVYGELPVDGGN 337
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+ HHPTEV AV++A R +P + L+ V+QPH YSR L DDF N L++A+ ++
Sbjct: 338 VMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVNVLADANVLL 397
Query: 492 VSAV 495
+ V
Sbjct: 398 LMEV 401
>gi|422615758|ref|ZP_16684465.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
japonica str. M301072]
gi|330895226|gb|EGH27564.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
japonica str. M301072]
Length = 486
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 155/429 (36%), Positives = 219/429 (51%), Gaps = 49/429 (11%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG G+ +A++ L +EVSGSDL S+ E L GA + IGH N
Sbjct: 15 RIRRIHFVGIGGVGMCGIAEVLLNLDYEVSGSDLKGSAVTERLESFGAQIFIGHRAENTI 74
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
G D +V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+
Sbjct: 75 GAD------VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKT 128
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S++A V A G D T ++G + + G + + EADE D FL L P VA
Sbjct: 129 TTTSLIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVA 187
Query: 254 VVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
VVTN+D +H+ +E D + +K F FL + G V+C D R +L +K+ T
Sbjct: 188 VVTNIDADHMATYEGDFNKLKKTFVEFLHNLPFYGLAVMCIDDPVVREILPLVKRPT--- 244
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLA 370
+TYGFS D A +V Q G + + + R R
Sbjct: 245 ----------------------LTYGFSESADIRAINVR---QDGMLTFFTVLRRDREPL 279
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+S+ +PG HNVLNSLA IA + D+ S E+I LS F GV RRF + G +
Sbjct: 280 DVSVNMPGNHNVLNSLATIA----IATDEGVSDEAIVQ---GLSGFQGVGRRFQVYGELP 332
Query: 431 ----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
+ DD+ HHP EV AV+ A R +P++ L+ V+QPH +SR L DDF L++
Sbjct: 333 VDGGNVMLVDDYGHHPREVAAVINAVRGGWPDRRLVMVYQPHRFSRTRDLYDDFVQVLAD 392
Query: 487 ADQVVVSAV 495
A+ +++ V
Sbjct: 393 ANVLLLMEV 401
>gi|398983526|ref|ZP_10690071.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM24]
gi|399015248|ref|ZP_10717524.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM16]
gi|398109259|gb|EJL99198.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM16]
gi|398157105|gb|EJM45509.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM24]
Length = 486
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 154/428 (35%), Positives = 217/428 (50%), Gaps = 47/428 (10%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG G+ +A++ L G++VSGSDL S E L GA + IGH N
Sbjct: 15 RIRRIHFVGIGGVGMCGIAEVLLNLGYQVSGSDLKASPVTERLESFGAQIFIGHRAENAA 74
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
D +V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+
Sbjct: 75 TAD------VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKT 128
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S++A V A G D T ++G + + G + + EADE D FL L P VA
Sbjct: 129 TTTSLIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVA 187
Query: 254 VVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
VVTN+D +H+ ++ D + +K F FL + G V+C D R +L +K+ T
Sbjct: 188 VVTNIDADHMATYDGDFNKLKKTFVEFLHNLPFYGLAVMCLDDPVVREILPLVKRPT--- 244
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER-GRPLAQ 371
+TYGFS D A ++ QG + R R
Sbjct: 245 ----------------------VTYGFSEDADVRAINI--RQQGMQTFFTVLRPDREPLD 280
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY- 430
+S+ +PG HNVLNSLA I + D+ S E+I LS F GV RRF + G +
Sbjct: 281 VSVNMPGNHNVLNSLATIC----IATDEGVSDEAIVQ---GLSGFQGVGRRFQVYGELPV 333
Query: 431 ---GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ DD+ HHPTEV AV++A R +P + L+ V+QPH YSR L DDF N L++A
Sbjct: 334 DGGNVMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVNVLADA 393
Query: 488 DQVVVSAV 495
+ +++ V
Sbjct: 394 NVLLLMEV 401
>gi|408483714|ref|ZP_11189933.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas sp. R81]
Length = 481
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 154/428 (35%), Positives = 218/428 (50%), Gaps = 47/428 (10%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG G+ +A++ L G++VSGSDL S E L GA + IGH N
Sbjct: 15 RIRRIHFVGIGGVGMCGIAEVLLNLGYQVSGSDLKESPVTERLKTFGAQIFIGHRAENAA 74
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
D +V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+
Sbjct: 75 EAD------VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKT 128
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S++A V A G D T ++G + + G + + EADE D FL L P VA
Sbjct: 129 TTTSLIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVA 187
Query: 254 VVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
VVTN+D +H+ ++ D + +K F FL + G V+C D R +L +K+ T
Sbjct: 188 VVTNIDEDHMATYDGDFNKLKKTFVEFLHNLPFYGLAVVCLDDPVVREILPLVKRPT--- 244
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER-GRPLAQ 371
+TYGFS D A +V +G + R R
Sbjct: 245 ----------------------VTYGFSEDADVRAINV--RQEGMQTFFTVLRPDREPLD 280
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY- 430
+S+ +PG HNVLNSLA I + D+ S E+I LS+F GV RRF + G +
Sbjct: 281 VSVNMPGNHNVLNSLATIC----IATDEGVSDEAIVE---GLSRFAGVGRRFQVYGQLPV 333
Query: 431 ---GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ DD+ HHPTEV AV++A R +P + L+ V+QPH YSR L DDF N L++A
Sbjct: 334 DGGDVMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVNVLADA 393
Query: 488 DQVVVSAV 495
+ +++ V
Sbjct: 394 NVLLLMEV 401
>gi|221202515|ref|ZP_03575545.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia multivorans
CGD2M]
gi|221208163|ref|ZP_03581168.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia multivorans
CGD2]
gi|421467705|ref|ZP_15916302.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia multivorans
ATCC BAA-247]
gi|221172066|gb|EEE04508.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia multivorans
CGD2]
gi|221177610|gb|EEE10027.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia multivorans
CGD2M]
gi|400233374|gb|EJO62926.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia multivorans
ATCC BAA-247]
Length = 465
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 147/425 (34%), Positives = 217/425 (51%), Gaps = 48/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ + G++VSGSDL ++ + L GA + IGH +NI+G
Sbjct: 8 IHFVGIGGAGMSGIAEVLVNLGYQVSGSDLARNAVTDRLAALGARIAIGHDAANIEG--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
NAVV S+A+ DN E+L A++ VPI +R LA+L IA++G+HGK+TT S
Sbjct: 65 ---ANAVVVSTAVRSDNPEVLAARAQRVPIVQRAVMLAELMRLKQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL A G D T ++G + + G G V EADE D FL L P + V+TN
Sbjct: 122 LVASVLAAGGLDPTFVIGGRLIS-AGANARLGTGDFIVAEADESDASFLNLYPVIEVITN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D +K F F +++ G V+C D R ++ I +
Sbjct: 181 IDADHMDTYGHDFARLKQAFIEFTQRLPFYGSAVVCVDDPNVRQIIPFISK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++ YG S AE + G + + GR + L +
Sbjct: 232 ----------------PVVRYGLSPDAQVRAEDIDAR-DGRMHFTVIREGRTPLAVVLNL 274
Query: 377 PGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH-- 433
PG+HNV N+LA IA L + D ++ L++F GV RRF G +
Sbjct: 275 PGLHNVQNALAAIAIATDLGVSDD--------AIQQALAEFNGVGRRFQRYGDVPTADGG 326
Query: 434 ---IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP E+ A + AAR FP + L+ FQPH Y+R DDF N LS D +
Sbjct: 327 RYTLIDDYGHHPVEMAATIAAARGAFPGRRLVLAFQPHRYTRTRDCFDDFVNVLSTVDAL 386
Query: 491 VVSAV 495
V++ V
Sbjct: 387 VLTEV 391
>gi|254480262|ref|ZP_05093510.1| UDP-N-acetylmuramate--alanine ligase [marine gamma proteobacterium
HTCC2148]
gi|214039824|gb|EEB80483.1| UDP-N-acetylmuramate--alanine ligase [marine gamma proteobacterium
HTCC2148]
Length = 478
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 141/424 (33%), Positives = 220/424 (51%), Gaps = 45/424 (10%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IH +G+GG+G+S +A++ + G++V+GSDL S E L + G + IGH +N+
Sbjct: 15 RIRRIHMIGVGGTGMSGIAEVLVNLGYQVAGSDLRESPVTERLRDRGVEVFIGHRAANVG 74
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
D VV+SSA+ + N E++ A+ +P+ R LA+L + IAV+G+HGK+
Sbjct: 75 TAD------VVVSSSAVDESNAEVVAAREARIPVVPRAEMLAELMRYRHGIAVAGTHGKT 128
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S++A V G D T ++G V + G + + EADE D FL L P V
Sbjct: 129 TTTSLIANVFGEAGLDPTFVIGGLVNSVGSNAQL-GASRFLIAEADESDASFLHLQPMVT 187
Query: 254 VVTNLDWEHVDIFEDEDAV-KSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
VVTN++ +H+D + + AV + F FL + G V+C D R LL ++ +
Sbjct: 188 VVTNIEADHMDTYGGDFAVLRRTFLEFLHNLPFYGVAVLCIDDPVIRELLPEVSR----- 242
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQI 372
+++TYGF+ D+ ++ + I PL +
Sbjct: 243 --------------------QVVTYGFADDADFRISNMQRDGLTTGFTINRPSNEPLP-V 281
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY-- 430
+L +PG+HNVLN+ A +A D+ E+I + L+ F GV RRF +G +
Sbjct: 282 TLNMPGLHNVLNAAATVAVAC----DEGLEDEAI---QSGLAGFAGVGRRFTRMGELNLP 334
Query: 431 --GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
+ DD+ HHPTEVRA L +ARQ +P + ++ V+QPH YSR L DDF + LS D
Sbjct: 335 GGTALLVDDYGHHPTEVRATLDSARQAWPEQRVVMVYQPHRYSRTRDLYDDFVSVLSRCD 394
Query: 489 QVVV 492
+++
Sbjct: 395 VLIL 398
>gi|257056716|ref|YP_003134548.1| UDP-N-acetylmuramate--L-alanine ligase [Saccharomonospora viridis
DSM 43017]
gi|256586588|gb|ACU97721.1| UDP-N-acetylmuramate--L-alanine ligase [Saccharomonospora viridis
DSM 43017]
Length = 472
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 145/418 (34%), Positives = 221/418 (52%), Gaps = 40/418 (9%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ--GND 136
H +G+GG+G+S +A++ L +G VSGSD S L GA + +G N+ G+
Sbjct: 16 HLIGVGGAGMSGIARILLDRGGRVSGSDAKDSRAFLTLRAHGARIEVGQRAQNLDVFGDP 75
Query: 137 GSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
P+AV+ S+AI +DN E++ A+ G+P+ R LA L E + + ++G+HGK++T
Sbjct: 76 ----PSAVIVSTAIKEDNPELVAARERGIPVLHRAEALAALMEGHRVACIAGTHGKTSTT 131
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SML L+ D + +G + + + +G G FV EADE DG FL SPSVAV+T
Sbjct: 132 SMLTVALQHCRLDPSFAIGGDLNE-SGANAHHGQGGIFVAEADESDGSFLSYSPSVAVIT 190
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D DA ++F F+++I GG L++C D + A L + + D G
Sbjct: 191 NIEPDHLDHHGTADAYHAVFHDFVRRIEPGGTLIVCADDEAASELATRAEAD-------G 243
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESV--CPNVQGGSDYILCERGRPLAQISL 374
V +++ YG ++ + A + P GG+ I+ RG L ++ +
Sbjct: 244 V---------------RVLRYGRAATGEADARVLDYSPGEDGGTVRIVL-RGEQL-RMGV 286
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHI 434
+PG H N++A + L L D + L L+ F GV RRF+ G +
Sbjct: 287 AVPGEHMAFNAVAALLAGLELGAD-------LEGLVEGLAAFGGVRRRFEFKGRAGDVRV 339
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
YDD+AHHPTEV A L+A RQ ++ VFQPH YSR +FA AL AD+VVV
Sbjct: 340 YDDYAHHPTEVSAQLRAVRQAAGRGRVVVVFQPHLYSRTRAFAAEFAEALGLADEVVV 397
>gi|415723610|ref|ZP_11469616.1| UDP-N-acetylmuramate--alanine ligase [Gardnerella vaginalis
00703C2mash]
gi|388063458|gb|EIK86042.1| UDP-N-acetylmuramate--alanine ligase [Gardnerella vaginalis
00703C2mash]
Length = 498
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 147/432 (34%), Positives = 231/432 (53%), Gaps = 32/432 (7%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
N G +HF+GIGG+G+S LA++ ++G VSG D S + L E G N+ IG S S++
Sbjct: 15 NSLGSVHFIGIGGAGMSVLAEMLHEEGVSVSGCDSKESDHTSRLEELGINVQIGQSASHV 74
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
+ D +V SSAI +N E++ A GV + R L+ L + V+G+HGK
Sbjct: 75 KNAD------ILVYSSAIKPNNPEVVAAAENGVKLVHRSDILSLLLSSKKGVTVAGAHGK 128
Query: 193 STTASMLAYVLKAMGD----DLTAIVGAHVPQFPDGSIFYGG----GKNFVLEADEYDGC 244
+TT+S+LA++LK G D + +G + Q G GG G V EADE DG
Sbjct: 129 TTTSSLLAHILKVCGKCDLADPSYAIGGSI-QAQGGGELDGGHAGCGSVMVAEADESDGS 187
Query: 245 FLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 304
F +P +A+VTN++ +H+D + + ++ F L G +VIC D AR++L+
Sbjct: 188 FEKYNPYIAIVTNVEADHLDHYGNAQNYRAAFVEHLSHAL--GFIVICADDDGARAVLED 245
Query: 305 IKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE 364
+ D+ LK + S+++S ++ + F + S GS+ +
Sbjct: 246 LSDDS-LKKTIAYASSKNSVSCLSNRVKSLVKFAFINHESEQTGS-------GSESFAID 297
Query: 365 RGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFD 424
G ++L IPG+HN N+ A I TL+G + + A S F+G SRRFD
Sbjct: 298 FGGDSISVNLMIPGLHNARNACAAI-IAATLLGMNPKDAANGA------SSFLGASRRFD 350
Query: 425 LIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANAL 484
+ G + G + DD+AHHPTE+ A+L+AAR+R+P+ + +FQPH +SR +FA+AL
Sbjct: 351 IRGCVGGVTVVDDYAHHPTEIDALLRAARRRYPDSTIRVLFQPHLFSRTRSFAREFASAL 410
Query: 485 SEADQVVVSAVL 496
S A+ V+V+ +
Sbjct: 411 SLANDVIVTGIF 422
>gi|189347969|ref|YP_001944498.1| UDP-N-acetylmuramate--L-alanine ligase [Chlorobium limicola DSM
245]
gi|229486479|sp|B3EIK7.1|MURC_CHLL2 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|189342116|gb|ACD91519.1| UDP-N-acetylmuramate/alanine ligase [Chlorobium limicola DSM 245]
Length = 466
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 150/428 (35%), Positives = 228/428 (53%), Gaps = 48/428 (11%)
Query: 72 KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSN 131
K R+ IH VGIGG+G+SA+A+L LK GF+VSGSDL + L E GA ++ GHS +
Sbjct: 5 KTRR--IHIVGIGGAGMSAIAELLLKSGFDVSGSDLQTGEVTDKLAEHGAIIYRGHSAGH 62
Query: 132 IQGNDGSRFPNAVVASSAIPQD-NVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
I+G D VV SSA+ +D NVEI A+ G+P+ KRD L +L I +SG+H
Sbjct: 63 IEGCD------VVVYSSAVRKDENVEISAAEKAGIPVIKRDEMLGELMRYKYGICISGTH 116
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT +M+A +L G+ T ++G V + GS G GK V+E+DEYD FL L+P
Sbjct: 117 GKTTTTAMIATMLMESGESPTVMIGG-VSDYLGGSTVVGEGKYMVIESDEYDRAFLKLTP 175
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
++A+V +L+ EH+D + + +K+ F F ++ G ++ C D R ++ + +
Sbjct: 176 TIALVNSLESEHMDTYGTLEELKNAFIAFADKVPFYGRVICCVDWPEIRKIIPMLNR--- 232
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
+ T+G D A + + + + + G
Sbjct: 233 ----------------------RYTTFGIEEHADVMASDIVME-KNHTVFTITAFGSRYE 269
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKL--PLSKFMGVSRRFDL-IG 427
+ L +PG HNVLN+LA + + L IA KL L + G+ RRF +
Sbjct: 270 GVRLHVPGRHNVLNALAAFSAGIEL---------EIAPEKLIAGLGCYSGMRRRFQIRYD 320
Query: 428 TIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
G I DD+AHHP+EV+A + AA+ + + +IAVFQPH +SR + D++ ALS A
Sbjct: 321 NGRGLMIVDDYAHHPSEVKATVSAAKNGWADSRIIAVFQPHLFSRTLEFADEYGWALSRA 380
Query: 488 DQVVVSAV 495
D V+++ V
Sbjct: 381 DSVIIAEV 388
>gi|161526004|ref|YP_001581016.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia multivorans
ATCC 17616]
gi|189349279|ref|YP_001944907.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia multivorans
ATCC 17616]
gi|229486476|sp|A9AI95.1|MURC_BURM1 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|160343433|gb|ABX16519.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia multivorans ATCC
17616]
gi|189333301|dbj|BAG42371.1| UDP-N-acetylmuramate-alanine ligase [Burkholderia multivorans ATCC
17616]
Length = 465
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 147/425 (34%), Positives = 217/425 (51%), Gaps = 48/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ + G++VSGSDL ++ + L GA + IGH +NI+G
Sbjct: 8 IHFVGIGGAGMSGIAEVLVNLGYQVSGSDLARNAVTDRLAALGARIAIGHDAANIEG--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
NAVV S+A+ DN E+L A++ VPI +R LA+L IA++G+HGK+TT S
Sbjct: 65 ---ANAVVVSTAVRSDNPEVLAARAQRVPIVQRAVMLAELMRLKQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL A G D T ++G + + G G V EADE D FL L P + V+TN
Sbjct: 122 LVASVLAAGGLDPTFVIGGRLIS-AGANARLGTGDFIVAEADESDASFLNLYPVIEVITN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D +K F F +++ G V+C D R ++ I +
Sbjct: 181 IDADHMDTYGHDFARLKQAFIEFTQRLPFYGSAVVCVDDPNVRQIIPFISK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++ YG S AE + G + + GR + L +
Sbjct: 232 ----------------PVVRYGLSPDAQVRAEDIDAR-DGRMHFTVIREGRAPLAVVLNL 274
Query: 377 PGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH-- 433
PG+HNV N+LA IA L + D ++ L++F GV RRF G +
Sbjct: 275 PGLHNVQNALAAIAIATDLGVSDD--------AIQQALAEFNGVGRRFQRYGDVPTADGG 326
Query: 434 ---IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP E+ A + AAR FP + L+ FQPH Y+R DDF N LS D +
Sbjct: 327 RYTLIDDYGHHPVEMAATIAAARGAFPGRRLVLAFQPHRYTRTRDCFDDFVNVLSTVDAL 386
Query: 491 VVSAV 495
V++ V
Sbjct: 387 VLTEV 391
>gi|422299947|ref|ZP_16387490.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas avellanae BPIC
631]
gi|422590145|ref|ZP_16664802.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|422650975|ref|ZP_16713775.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|330877132|gb|EGH11281.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|330964058|gb|EGH64318.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|407987995|gb|EKG30654.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas avellanae BPIC
631]
Length = 486
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 153/425 (36%), Positives = 218/425 (51%), Gaps = 49/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G+EVSGSDL S+ E L GA + +GH N G D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKGSAVTERLESFGAQIFVGHRAENTVGAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 78 -----VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ + D + +K F FL + G V+C D R +L +K+ T
Sbjct: 192 IDADHMATYGGDFNKLKKTFVEFLHNLPFYGLAVMCVDDPVVREILPLVKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLAQISL 374
+TYGFS D A +V Q G + + + R R +S+
Sbjct: 245 ------------------LTYGFSESADIRAINVR---QDGMLTFFTVLRRDREPLDVSV 283
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY---- 430
+PG HNVLNSLA IA + D+ S E+I LS F GV RRF + G +
Sbjct: 284 NMPGNHNVLNSLATIA----IATDEGVSDEAIVQ---GLSGFQGVGRRFQVYGELPVEGG 336
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP EV AV+ A R +P++ L+ V+QPH +SR L DDF L++A+ +
Sbjct: 337 NVMLVDDYGHHPREVAAVISAVRGGWPDRRLVMVYQPHRFSRTRDLYDDFVQVLADANVL 396
Query: 491 VVSAV 495
++ V
Sbjct: 397 LLMEV 401
>gi|89095258|ref|ZP_01168179.1| UDP-N-acetylmuramate--alanine ligase [Neptuniibacter caesariensis]
gi|89080465|gb|EAR59716.1| UDP-N-acetylmuramate--alanine ligase [Oceanospirillum sp. MED92]
Length = 482
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 145/423 (34%), Positives = 220/423 (52%), Gaps = 48/423 (11%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
R IHF+GIGG G+ +A++ L QG+ +SGSD+ S+ + L + G +++IGH SNI
Sbjct: 16 RRISRIHFIGIGGVGMCGIAEVLLNQGYAISGSDIKDSATTQRLKKLGMSIYIGHEESNI 75
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
+ VV S+A+ ++N E+ A+ +PI +R LA+L + IAV+G+HGK
Sbjct: 76 VDV------DVVVVSTAVNEENPEVKAAREKRIPIVRRAEMLAELMRYRHGIAVAGTHGK 129
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+TT S+LA + D T ++G + + G + V EADE D FL L P V
Sbjct: 130 TTTTSLLASIFAEGELDPTFVIGGRLNSAGTNAKM-GTSRYLVAEADESDASFLHLQPMV 188
Query: 253 AVVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
A+VTN+D +H++ +E++ +K F FL + G V+C D +L +I +
Sbjct: 189 AIVTNIDADHMETYENDFSRLKKTFVEFLHNLPFYGLAVMCVDDPVVCEILPEISR---- 244
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQ 371
++TYG S D+ AE++ +G +R A
Sbjct: 245 ---------------------PVLTYGVSEDADYRAENI--RQEGMCTRFTVKRPEGFAD 281
Query: 372 --ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
+SL +PG HN+LN+LA IA D+ S E+I L KF GV RRF ++G +
Sbjct: 282 LDVSLNMPGHHNMLNALATIAVA----SDEGISDEAICS---ALEKFEGVGRRFQVLGDV 334
Query: 430 Y----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
+ DD+ HHP EV AV++A R+ +P K L+ ++QPH YSR L +DF LS
Sbjct: 335 SVTDGTAMLVDDYGHHPREVNAVVKAIREGWPEKRLVMIYQPHRYSRTRDLYEDFVEVLS 394
Query: 486 EAD 488
E D
Sbjct: 395 EVD 397
>gi|75675245|ref|YP_317666.1| UDP-N-acetylmuramate--L-alanine ligase [Nitrobacter winogradskyi
Nb-255]
gi|109892715|sp|Q3STS7.1|MURC_NITWN RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|74420115|gb|ABA04314.1| UDP-N-acetylmuramate--L-alanine ligase [Nitrobacter winogradskyi
Nb-255]
Length = 467
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 152/429 (35%), Positives = 229/429 (53%), Gaps = 52/429 (12%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G+ V GSD + + L E G + +GH N+ G
Sbjct: 8 GPIHFVGIGGIGMSGIAEVLCNLGYTVQGSDASEGANVVRLREKGVKVTVGHKAGNVNGA 67
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D +V S+AI +DN E++ A++ +P+ +R LA+L + +A++G+HGK+TT
Sbjct: 68 D------VLVVSTAIKRDNPELMAARAQRIPVVRRAEMLAELMRLKSCVAIAGTHGKTTT 121
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L A D T I G + + + G G+ V+EADE DG FL L VA+V
Sbjct: 122 TSMVATLLDAGDFDPTVINGGIINAYGTNARL-GAGEWMVVEADESDGTFLKLPTDVAIV 180
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D F+ DAV+ FR F++ + G V+C D ++++ +I+
Sbjct: 181 TNVDAEHLDHFKTFDAVQDAFRSFVENVPFYGFAVMCIDHPVVQAMVGRIE--------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR------PL 369
D +IITYG + D + PN GGS + + R R +
Sbjct: 232 ---------------DRRIITYGQNPQADVRLVDLAPN-GGGSHFKVMFRNRKTDAAHEI 275
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHE---SIACLKLPLSKFMGVSRRFDLI 426
+ + L +PG HN LN+ A IA +HE + A ++ L+ F GV RRF
Sbjct: 276 SDLVLPMPGPHNALNATAAIAV----------AHELGITDATIRKALAAFGGVKRRFTRT 325
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G G + DD+ HHP E+ AVL+AAR+ + +IAV QPH Y+RL L ++F ++
Sbjct: 326 GEWNGVTVIDDYGHHPVEIAAVLKAARESTDGR-VIAVVQPHRYTRLQALFEEFCTCFND 384
Query: 487 ADQVVVSAV 495
AD VVV+ V
Sbjct: 385 ADTVVVADV 393
>gi|421479658|ref|ZP_15927338.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia multivorans
CF2]
gi|400222604|gb|EJO52973.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia multivorans
CF2]
Length = 465
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 147/425 (34%), Positives = 217/425 (51%), Gaps = 48/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ + G++VSGSDL ++ + L GA + IGH +NI+G
Sbjct: 8 IHFVGIGGAGMSGIAEVLVNLGYQVSGSDLARNAVTDRLAALGARIAIGHDAANIEG--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
NAVV S+A+ DN E+L A++ VPI +R LA+L IA++G+HGK+TT S
Sbjct: 65 ---ANAVVVSTAVRSDNPEVLAARAQRVPIVQRAVMLAELMRLKQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL A G D T ++G + + G G V EADE D FL L P + V+TN
Sbjct: 122 LVASVLAAGGLDPTFVIGGRLIS-AGANARLGTGDFIVAEADESDASFLNLYPVIEVITN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D +K F F +++ G V+C D R ++ I +
Sbjct: 181 IDADHMDTYGHDFARLKQAFIEFTQRLPFYGSAVVCVDDPNVRQIIPFISK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++ YG S AE + G + + GR + L +
Sbjct: 232 ----------------PVVRYGLSPDAQVRAEDIDAR-DGRMHFTVIREGRAPLAVVLNL 274
Query: 377 PGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH-- 433
PG+HNV N+LA IA L + D ++ L++F GV RRF G +
Sbjct: 275 PGLHNVQNALAAIAIATDLGVSDD--------AIQQALAEFNGVGRRFQRYGDVPTADGG 326
Query: 434 ---IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP E+ A + AAR FP + L+ FQPH Y+R DDF N LS D +
Sbjct: 327 RYTLIDDYGHHPVEMAATIAAARGAFPGRRLVLAFQPHRYTRTRDCFDDFVNVLSTVDAL 386
Query: 491 VVSAV 495
V++ V
Sbjct: 387 VLTEV 391
>gi|404495270|ref|YP_006719376.1| UDP-N-acetylmuramate--L-alanine ligase [Geobacter metallireducens
GS-15]
gi|418065737|ref|ZP_12703108.1| UDP-N-acetylmuramate/alanine ligase [Geobacter metallireducens
RCH3]
gi|109892706|sp|Q39YL8.1|MURC_GEOMG RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|78192889|gb|ABB30656.1| UDP-N-acetylmuramate--alanine ligase [Geobacter metallireducens
GS-15]
gi|373561817|gb|EHP88043.1| UDP-N-acetylmuramate/alanine ligase [Geobacter metallireducens
RCH3]
Length = 461
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 145/420 (34%), Positives = 222/420 (52%), Gaps = 43/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+S +A++ L G++VSGSDL S + L G ++ GH+ N+ D
Sbjct: 8 IHFVGIGGIGMSGIAEVLLNLGYKVSGSDLKQSDTTDRLASLGGDIRFGHARENLADVD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV S+A+ DN E++ AK +P+ R LA+L IA++G+HGK+TT S
Sbjct: 67 -----VVVTSTAVHDDNPEVMEAKRRMIPVIPRAEMLAELMRMKYGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A L G D T ++G + + G G+ V EADE DG FL LSP++AVVTN
Sbjct: 122 MVATALTHGGIDPTIVIGGKLNTLGTNAKL-GQGQFLVAEADESDGSFLKLSPTIAVVTN 180
Query: 258 LDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + + +K F F+ +I G V+C + + +L ++K+
Sbjct: 181 IDADHLDFYTGGIEQIKDTFVDFINKIPFYGLAVLCLEDRNIAEILPRVKK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS-DYILCERGRPLAQISLQ 375
+ +TYG SS D A + ++GG+ ++ +G + ++S
Sbjct: 232 ----------------RFVTYGLSSQADIRATHI--RLEGGTTSFVAHYKGYRMGEVSFA 273
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
+PG HNVLN+LA IA + L Q E A KF GV RRF + G + G +
Sbjct: 274 MPGAHNVLNALACIAVAMELDVPFAQIQEGFA-------KFGGVGRRFQVKGEVNGITVV 326
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+ HHP E+RA L A + +P++ L+ FQPH +SR L +F +AD +V++ +
Sbjct: 327 DDYGHHPAEIRATLAAGKSGWPDRRLVVAFQPHRFSRTKELFAEFVTCFYDADVLVLTDI 386
>gi|398937646|ref|ZP_10667355.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM41(2012)]
gi|398166763|gb|EJM54854.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM41(2012)]
Length = 486
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 153/424 (36%), Positives = 215/424 (50%), Gaps = 47/424 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G+EVSGSDL S E L GA + IGH N D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKASPVTERLESFGAQIFIGHRAENAANAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 78 -----VLVTSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ ++ D + +K F FL + G V+C D R +L +K+ T
Sbjct: 192 IDADHMATYDGDFNKLKKTFVEFLHNLPFYGLAVVCLDDPVVREILPLVKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER-GRPLAQISLQ 375
+TYGF D A +V QG + R R +S+
Sbjct: 245 ------------------VTYGFGDDCDVRAINV--RQQGMQTFFTVLRPDRDPLDVSVN 284
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----G 431
+PG HNVLN+LA I + D+ S E+I LS F GV RRF + G +
Sbjct: 285 MPGNHNVLNALATIC----IASDEGVSDEAIV---QGLSGFQGVGRRFQVYGELPVDGGS 337
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+ HHPTEV AV++A R +P + L+ V+QPH YSR L DDF N L++A+ ++
Sbjct: 338 VMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVNVLADANVLL 397
Query: 492 VSAV 495
+ V
Sbjct: 398 LMEV 401
>gi|85707767|ref|ZP_01038833.1| UDP-N-acetylmuramate--L-alanine ligase [Erythrobacter sp. NAP1]
gi|85689301|gb|EAQ29304.1| UDP-N-acetylmuramate--L-alanine ligase [Erythrobacter sp. NAP1]
Length = 478
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 160/433 (36%), Positives = 226/433 (52%), Gaps = 52/433 (12%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G+ V GSD+ +E L E G ++ IGH N++G
Sbjct: 9 GVIHFVGIGGIGMSGIAEVMHNLGYTVQGSDIKEGPVVERLREQGISVRIGHEKENVEG- 67
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
VV SSA+ + N E+ HA P+ +R LA+L + +AV+G+HGK+TT
Sbjct: 68 -----AAVVVTSSAVRRTNPEVAHALENRTPVVRRAEMLAELMRLKSTVAVAGTHGKTTT 122
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN-FVLEADEYDGCFLGLSPSVAV 254
SM+A +L D T I G + Q+ GS G + V+EADE DG FL L ++AV
Sbjct: 123 TSMIASLLDCGEIDPTVINGGIIEQY--GSNARMGDSDWMVVEADESDGSFLRLDGTIAV 180
Query: 255 VTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYS 314
VTN+D EH+D + D D VK F F+ + G ++C D ++++ ++
Sbjct: 181 VTNIDPEHLDHYGDFDGVKKAFVEFIHNVPFYGAAILCVDHPEVQAVIGDVR-------- 232
Query: 315 GGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS-DYILCERG---RPLA 370
D K++TYGFS D +V P G + D I+ +RG R +
Sbjct: 233 ----------------DRKVVTYGFSLQADICGVNVRPTESGNTFDVIVRQRGEEDRRIE 276
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+ L +PG HNV N+LA IA + + S E+I F GV RRF +GT+
Sbjct: 277 GVHLPMPGRHNVQNALAAIAVAIEM----GCSDETICN---GFGSFSGVRRRFTKVGTVP 329
Query: 431 ----GCHIYDDFAHHPTEVRAVLQAARQRFPNKA----LIAVFQPHTYSRLVVLKDDFAN 482
I DD+AHHP E+RAVL AAR+ +IAV QPH Y+RL L DDF N
Sbjct: 330 FPTGHATIIDDYAHHPVEIRAVLGAAREATEAAGVEGRVIAVMQPHRYTRLNDLMDDFQN 389
Query: 483 ALSEADQVVVSAV 495
+EAD V ++ V
Sbjct: 390 CFNEADMVFITPV 402
>gi|285019573|ref|YP_003377284.1| UDP-N-acetylmuramate-L-alanine ligase [Xanthomonas albilineans GPE
PC73]
gi|283474791|emb|CBA17290.1| probable udp-n-acetylmuramate-l-alanine ligase protein [Xanthomonas
albilineans GPE PC73]
Length = 478
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 154/427 (36%), Positives = 225/427 (52%), Gaps = 52/427 (12%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HFVGIGG+G+S +A++ L G+EVSGSD ++ L++ GA + GHS +N+ G D
Sbjct: 18 VHFVGIGGTGMSGIAEVMLTLGYEVSGSDNADNAATRRLVKLGARVLRGHSAANVLGTD- 76
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSAI +DN E++ A+S +PI R LA+L IAV+G+HGK+TT S
Sbjct: 77 -----CVVVSSAIREDNPELMEARSQRIPIMPRAAMLAELMRFRRGIAVAGTHGKTTTTS 131
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+ A VL G D T ++G + + GGG+ V EADE DG FL L+P ++V+TN
Sbjct: 132 LTAAVLSEGGMDPTFVIGGQL-LAAGANAKLGGGQWLVAEADESDGSFLRLNPLISVITN 190
Query: 258 LDWEHVDIFEDEDA-VKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H++ + ++ A +++ F FL+++ G V+C D +L Q +
Sbjct: 191 IDADHLENYGNDFARIQAAFAEFLQRLPFYGLAVLCIDDPEVAALAAQTPR--------- 241
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER---GRPLAQIS 373
+++YG S D AE V VQ GS R G A ++
Sbjct: 242 ----------------HVMSYGLSENADVRAEDV---VQEGSRMHFTLRMPEGSSTA-VT 281
Query: 374 LQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH 433
L +PG HNVLN+ IG Q + A + L F G+ RRF+ +G + +
Sbjct: 282 LALPGRHNVLNA-----LAAAAIG--WQLGVTPAAIASALQSFAGIGRRFNDLGEVVTAN 334
Query: 434 -----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
+ DD+ HHP E+ AV AAR +P+K L+ FQPH YSR D FA LSE D
Sbjct: 335 GARVRVVDDYGHHPRELAAVFAAARGGWPDKRLVVAFQPHRYSRTRDQFDAFAAVLSEVD 394
Query: 489 QVVVSAV 495
+V+S V
Sbjct: 395 ALVLSEV 401
>gi|291288102|ref|YP_003504918.1| UDP-N-acetylmuramate--L-alanine ligase [Denitrovibrio acetiphilus
DSM 12809]
gi|290885262|gb|ADD68962.1| UDP-N-acetylmuramate/alanine ligase [Denitrovibrio acetiphilus DSM
12809]
Length = 465
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 152/421 (36%), Positives = 216/421 (51%), Gaps = 46/421 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+S +A++ GF+VSGSDL+ + ++ L G ++ GH N +G D
Sbjct: 11 IHFVGIGGIGMSGIAEVLHTMGFDVSGSDLLEGANVKRLQNMGISIQTGHRYENAEGAD- 69
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSA+ + N E++ AK +P+ KR LA+L IA+SGSHGK+TT S
Sbjct: 70 -----VVVYSSAVRETNPELVCAKDNFIPVIKRGEMLAELMRLKYSIAISGSHGKTTTTS 124
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A +L A D T +VG + D + G G V EADE D FL +SPSVA+VTN
Sbjct: 125 MVAEILNAAKLDPTVVVGG-ILNTKDTNATLGSGNVIVAEADESDRSFLLMSPSVALVTN 183
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D+EH D + D + VK F F+ ++ G V+C + L+ I
Sbjct: 184 IDFEHPDTYRDLEDVKRTFADFISRVPFYGSAVLCLEDDNTADLIPLI------------ 231
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS---DYILCERGRPLAQISL 374
D + +TYGF + D + +V +G S D I+ G +I L
Sbjct: 232 -------------DRRFVTYGFRAQADVHGVNV--EQKGFSMQFDVIIS--GEKAGRIKL 274
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHI 434
PG HNVLN+L IA Q +K L F GV RR C +
Sbjct: 275 GFPGEHNVLNALGAIAVAT-------QFDIPFRTIKRALEGFKGVQRRLTSRYDDGECIV 327
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSA 494
DD+ HHPTE++ L+A R +P+K ++A+FQPH YSR L +FA A +AD + ++
Sbjct: 328 MDDYGHHPTEIKTTLKAVRGAYPDKKILAIFQPHRYSRTAALMKEFATAFFDADMLFITD 387
Query: 495 V 495
+
Sbjct: 388 I 388
>gi|206561798|ref|YP_002232563.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia cenocepacia
J2315]
gi|444362174|ref|ZP_21162732.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia cenocepacia
BC7]
gi|444370397|ref|ZP_21170072.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia cenocepacia
K56-2Valvano]
gi|229486475|sp|B4E6J1.1|MURC_BURCJ RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|198037840|emb|CAR53784.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia cenocepacia
J2315]
gi|443597259|gb|ELT65697.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia cenocepacia
BC7]
gi|443597456|gb|ELT65881.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia cenocepacia
K56-2Valvano]
Length = 465
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 148/425 (34%), Positives = 216/425 (50%), Gaps = 48/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ G+ VSGSDL ++ + L GA + IGH +NI+G
Sbjct: 8 IHFVGIGGAGMSGIAEVLANLGYAVSGSDLSRNAVTDRLEALGARIAIGHDAANIEG--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
NAVV S+A+ DN E+L A++ VPI +R LA+L IA++G+HGK+TT S
Sbjct: 65 ---ANAVVVSTAVRSDNPEVLAARAKRVPIVQRAVMLAELMRLKQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL A G D T ++G + + G G V EADE D FL L P + V+TN
Sbjct: 122 LVASVLAAGGLDPTFVIGGRLIS-AGANARLGTGDFIVAEADESDASFLNLYPVIEVITN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D +K F F +++ G V+C D R ++ I +
Sbjct: 181 IDADHMDTYGHDFARLKQAFIEFTQRLPFYGSAVVCVDDPNVRQIIPFISK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++ YG S AE + G + + GR + L +
Sbjct: 232 ----------------PVVRYGLSPDAQVRAEDIDAR-DGRMHFTVIREGRAPLAVVLNM 274
Query: 377 PGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH-- 433
PG+HNV N+LA IA L + D ++L L++F GV RRF G +
Sbjct: 275 PGLHNVQNALAAIAIATDLGVSDD--------AIQLALAEFNGVGRRFQRYGEVPSADGG 326
Query: 434 ---IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP E+ A + AAR FP + L+ FQPH Y+R DDF N LS D +
Sbjct: 327 QYTLIDDYGHHPVEMAATIAAARGAFPGRRLVLAFQPHRYTRTRDCFDDFVNVLSTVDAL 386
Query: 491 VVSAV 495
V++ V
Sbjct: 387 VLTEV 391
>gi|256379761|ref|YP_003103421.1| UDP-N-acetylmuramate--L-alanine ligase [Actinosynnema mirum DSM
43827]
gi|255924064|gb|ACU39575.1| UDP-N-acetylmuramate/alanine ligase [Actinosynnema mirum DSM 43827]
Length = 466
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 149/423 (35%), Positives = 219/423 (51%), Gaps = 48/423 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H VGIGG+G+S +A++ L +G EVSGSD S + L GA++ +GH +N+ DG
Sbjct: 8 VHLVGIGGAGMSGIARILLARGAEVSGSDAKDSRTVLALRAQGAHVAVGHDGANLDQLDG 67
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
P AVV S+AI +DN E++ A+ GV + +R LA L + + V+G+HGK++T S
Sbjct: 68 G--PTAVVVSTAIREDNPELVAARERGVAVLRRAEALAALMLDHRVACVAGTHGKTSTTS 125
Query: 198 MLAYVLK--------AMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLS 249
ML L+ A+G DL GA+ Q G G FV EADE DG FL +
Sbjct: 126 MLTVALQHCRMDPSFAIGGDLNE-SGANAHQ--------GAGGVFVAEADESDGSFLFFA 176
Query: 250 PSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
PSVAVVTN++ +H+D +A ++F FL++I GG L+ C D + + +L D+ ++
Sbjct: 177 PSVAVVTNVEADHLDHHGTVEAYVAVFDEFLERIEPGGVLIACADDEGSAALADRAEK-- 234
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPL 369
++ YG ++ + A V G + E
Sbjct: 235 --------------------RGIRVRRYGRAATGEGAAVLVEHRPDGAGGLAVVELDGER 274
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
+ + +PG H N++A + + L D+ E +A F GV RRF+ G
Sbjct: 275 LDVRVAVPGEHMAGNAVAALLAAVELGADRWGVLEGLAA-------FGGVRRRFEFKGVA 327
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
G +YDD+AHHPTEV A L+AAR + L+ VFQPH YSR +F AL+ AD+
Sbjct: 328 AGVRVYDDYAHHPTEVAAQLKAARPVAGDGRLVVVFQPHLYSRTKTFAAEFGKALALADE 387
Query: 490 VVV 492
VVV
Sbjct: 388 VVV 390
>gi|257465205|ref|ZP_05629576.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus minor 202]
gi|257450865|gb|EEV24908.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus minor 202]
Length = 475
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 149/475 (31%), Positives = 239/475 (50%), Gaps = 72/475 (15%)
Query: 60 TFKRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEA 119
F+ + +V R IHF+GIGG+G+S +A++ L +G+++SGSD+ S+ + L +A
Sbjct: 3 NFQDKVKKLVPEMRRVNQIHFIGIGGAGMSGIAEVLLNEGYQISGSDIADSAVTQRLAKA 62
Query: 120 GANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE 179
GA + IGH NI+G + VVASSAI + N E+ AK +P+ +R LA++
Sbjct: 63 GAKICIGHQAENIEG------ASVVVASSAIDESNPEVAAAKEARIPVIQRAQMLAEIMR 116
Query: 180 KYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN------ 233
+ IA++G+HGK+TT +M++ + D P F +G + GKN
Sbjct: 117 FRHGIAIAGTHGKTTTTAMISMIYTEAKLD---------PTFVNGGLVKSAGKNAHLGAS 167
Query: 234 --FVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLV 290
+ EADE D FL L P V+VVTN++ +H+D + D + +K + RFL+ + G V
Sbjct: 168 RYLIAEADESDASFLHLQPMVSVVTNIEPDHMDTYGGDFEKMKETYVRFLRNLPFYGLAV 227
Query: 291 ICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESV 350
+C D + + ++ + ++I+YGFS D+ E
Sbjct: 228 MCADDETVMEIAPKVGR-------------------------QVISYGFSEKADYRIEDY 262
Query: 351 CPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIA--C 408
G ++C G + ++ L +PG HN LN+ A +A E IA
Sbjct: 263 QQTGFQGHYTVVCPTGERI-EVLLNVPGRHNALNATAALAVA---------KEEGIANEA 312
Query: 409 LKLPLSKFMGVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAV 464
+ L+ F G RRFD +G+ + + DD+ HHPTEV ++AARQ + NK ++ V
Sbjct: 313 ILAALADFQGAGRRFDQLGSFIRPNGKVMLVDDYGHHPTEVDVTIKAARQGWENKRVVMV 372
Query: 465 FQPHTYSRLVVLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
FQPH YSR L DDF LS+ D +++ L ++A ++ A + +C
Sbjct: 373 FQPHRYSRTRDLFDDFVQVLSQVDALIM-------LNVYAAGEAPIVGAESKDLC 420
>gi|335044817|ref|ZP_08537840.1| UDP-N-acetylmuramate--L-alanine ligase [Oribacterium sp. oral taxon
108 str. F0425]
gi|333758603|gb|EGL36160.1| UDP-N-acetylmuramate--L-alanine ligase [Oribacterium sp. oral taxon
108 str. F0425]
Length = 470
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 140/424 (33%), Positives = 218/424 (51%), Gaps = 40/424 (9%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
+R W+HF+GIGG +S LA++ +GF VSGSD+ S + L G + + S N+
Sbjct: 7 DRPIWVHFIGIGGISMSGLAEILHDRGFTVSGSDMKASPLTDHLKSLGIQVSVPQSPDNV 66
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHG 191
+ + ++AI + N E K G+P R L ++ + Y I VSG+HG
Sbjct: 67 KSG-----IELCIYTAAIAESNPEFQEVKRQGIPTMSRAELLGRIMKNYKEAINVSGTHG 121
Query: 192 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPS 251
K+TT SM+ +L D T VG + G++ G F+ EA EY FL P+
Sbjct: 122 KTTTTSMIGEILLEAQMDPTITVGGMMKDI-GGNLRVGKSDVFLAEACEYTNSFLSFFPT 180
Query: 252 VAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
+ VV N++ +H+D F+D + ++ FR+F++++ G LV D + L+
Sbjct: 181 IEVVLNVEADHLDFFKDINEIRQSFRKFIEKLPENGILVFNKDIPHSEYFLE-------- 232
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQ 371
+L G+ KIIT+G ++ D+ A + + Y L ERG Q
Sbjct: 233 ------------NLPGR----KIITFGHNN-ADYTANFISYDHFAHPTYTLFERGEDRGQ 275
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG 431
++L + G HN+ NSL+ IA R + +K L+ F G RRF GT+ G
Sbjct: 276 VTLGVTGEHNIYNSLSAIAVA-------RAIGIPLETIKDALASFGGTDRRFQRKGTLNG 328
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
I DD+AHHP E+ A + A+ ++ +K L VFQPHTYSR + L DDFA ALS+AD+++
Sbjct: 329 FTIIDDYAHHPQEIAATIATAK-KYVHKRLWVVFQPHTYSRTLALMDDFAGALSQADEII 387
Query: 492 VSAV 495
++ +
Sbjct: 388 LADI 391
>gi|421466354|ref|ZP_15915033.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter
radioresistens WC-A-157]
gi|400203134|gb|EJO34127.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter
radioresistens WC-A-157]
Length = 482
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 146/430 (33%), Positives = 220/430 (51%), Gaps = 51/430 (11%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG+G+ +A++ QG+ VSGSD+ S L E G + IGH+ NI+
Sbjct: 21 RIKQIHFVGIGGAGMCGIAEVLKNQGYCVSGSDIKASKTTAQLEENGIKVFIGHAADNIK 80
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
+ +V S+AI +N E+ A +P+ +R L +L + IAV+G+HGK+
Sbjct: 81 N------ASVLVVSTAIDPENPEVKAAIEQRIPVVRRAEMLGELMRYRHGIAVAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S+L +L G D T ++G + + + G + V EADE D FL L P A
Sbjct: 135 TTTSLLTCMLAEEGMDPTYVIGGLLNRTGVNAAL-GASRYIVAEADESDASFLHLEPMAA 193
Query: 254 VVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
+VTN+D +H+D + D +K F +FL ++ G V+CGD R ++ +I +
Sbjct: 194 IVTNIDADHMDTYGGSFDVLKDTFIQFLHKLPFYGLAVVCGDDANIREIMPRIAR----- 248
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLA 370
++TYGF+ ND A V Q G S + + + R
Sbjct: 249 --------------------PLLTYGFNPDNDIRAVDV---EQDGMRSHFTVLRKDREPL 285
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
++++ PG+HNVLN+LA I G S A + L F GV RRF + G +
Sbjct: 286 RLTINQPGLHNVLNALAAI-------GVATDEGVSDAAIGRALEGFSGVGRRFQVQGE-F 337
Query: 431 GCH-----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
G + DD+ HHP EV A ++AARQ P++ L+ +FQPH +SR DDF + LS
Sbjct: 338 GLEQGTVKLVDDYGHHPKEVEATIKAARQSHPDRRLVMIFQPHRFSRTRDCFDDFVDVLS 397
Query: 486 EADQVVVSAV 495
+ DQ+++ V
Sbjct: 398 QVDQLLLLEV 407
>gi|385807874|ref|YP_005844271.1| UDP-N-acetyl muramate--L-alanine ligase [Corynebacterium
pseudotuberculosis 267]
gi|383805267|gb|AFH52346.1| UDP-N-acetyl muramate--L-alanine ligase [Corynebacterium
pseudotuberculosis 267]
Length = 485
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/439 (32%), Positives = 223/439 (50%), Gaps = 64/439 (14%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H +GIGG+G+S +A++ L +G VSGSD+ S + L GA++ +GH+ N+ +
Sbjct: 13 VHLIGIGGAGMSGVARILLSRGATVSGSDVKDSRAVLALRSMGAHVAVGHAAENL--SIA 70
Query: 138 SRFPNAVVAS-SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
P VV S +AIPQDN E++ A+ +G+P+ +R L +L E + ++G+HGK++T
Sbjct: 71 GEKPTVVVTSFAAIPQDNPELVAARELGIPVIRRSDLLGELMEGSTQVLIAGTHGKTSTT 130
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM ++A G D + +G + + + G G FV EADE D L P++AV+T
Sbjct: 131 SMAVVAMQAAGMDPSFAIGGQLNKAGTNA-HQGTGDAFVAEADESDASLLRYKPNIAVIT 189
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F+ E+A +F +F ++ G LV+C D L +I +
Sbjct: 190 NIEPDHLDFFKSEEAYFEVFEKFADRLVPGVSLVVCLDDPHTAMLGQKIHE--------- 240
Query: 317 VVSNQSSDLWGQGHDYKIITYG---------------FSSFNDWYAESVCPNVQGGSDYI 361
+ D K++ YG SF ++ +V V GG +
Sbjct: 241 -----------KHKDIKVVGYGTVAASAEYPDIAKTVVESFEITHSGTVATIVVGGQE-- 287
Query: 362 LCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSR 421
++ L+ PG H VLN+ + + GD + L +S F GV R
Sbjct: 288 --------TEVVLRTPGRHMVLNADKSLTAGVIAGGD-------LFKLAAGISDFSGVRR 332
Query: 422 RFDLIGTI-----YGCHIYDDFAHHPTEVRAVLQAARQRFPNKA---LIAVFQPHTYSRL 473
RF+ G + G +YDD+AHHPTEV AVL AAR + + L+ +FQPH YSR
Sbjct: 333 RFEYHGVVAEGDFAGIELYDDYAHHPTEVSAVLTAARAKLQARGQGRLLVIFQPHLYSRT 392
Query: 474 VVLKDDFANALSEADQVVV 492
+ D+FA ALS AD+ +V
Sbjct: 393 INFVDEFAAALSLADEAIV 411
>gi|86148541|ref|ZP_01066828.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio sp. MED222]
gi|85833687|gb|EAQ51858.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio sp. MED222]
Length = 486
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 147/439 (33%), Positives = 222/439 (50%), Gaps = 61/439 (13%)
Query: 67 CIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG 126
+V R IHF+GIGG+G+S +A++ L +G++++GSD+ + E L+ GA +++G
Sbjct: 14 AMVPEMRRVKSIHFIGIGGAGMSGIAEVLLNEGYQITGSDIAQNPVTERLVSKGATVYVG 73
Query: 127 HSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAV 186
H SN + VV S+AI ++N EI+ A+ PI +R LA+L + IAV
Sbjct: 74 HQASN------VADASVVVVSTAINEENPEIIAAREARTPIVRRAEMLAELMRFRHGIAV 127
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEA 238
+G+HGK+TT +++ + D P F +G + G N + EA
Sbjct: 128 AGTHGKTTTTALVTQIYSEADLD---------PTFVNGGLVKSAGTNARLGSSRILIAEA 178
Query: 239 DEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQC 297
DE D FL L P V++VTN++ +H+D + D + +K F FL + G V+C D
Sbjct: 179 DESDASFLHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAVMCVDDPV 238
Query: 298 ARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG 357
R L+ Q+ + ++ITYGFS D E+ Q G
Sbjct: 239 VRELIPQVSR-------------------------QVITYGFSEDADIRIENYVQEGQQG 273
Query: 358 SDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFM 417
+ + G+ I+L IPG HN LN+ A IA + S E+I LK ++
Sbjct: 274 K-FTVVREGKANLDITLNIPGRHNALNASAAIAVAT----EDDISDEAI--LK-AMAGTE 325
Query: 418 GVSRRFDLIG---TIYG-CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRL 473
G RRFD +G T G + DD+ HHPTEV +QAAR + +K L+ +FQPH YSR
Sbjct: 326 GTGRRFDHLGEYETGKGVAMLVDDYGHHPTEVDVTIQAARSGWTDKRLVMIFQPHRYSRT 385
Query: 474 VVLKDDFANALSEADQVVV 492
L DDFAN L + D +++
Sbjct: 386 RDLYDDFANVLEQVDVLIL 404
>gi|226943454|ref|YP_002798527.1| UDP-N-acetylmuramate--L-alanine ligase [Azotobacter vinelandii DJ]
gi|259509764|sp|C1DQA0.1|MURC_AZOVD RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|226718381|gb|ACO77552.1| UDP-N-acetylmuramate--alanine ligase [Azotobacter vinelandii DJ]
Length = 488
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 150/430 (34%), Positives = 218/430 (50%), Gaps = 49/430 (11%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
R G IHFVGIGG+G+ +A++ L G+EVSGSDL S L GA + IGH N
Sbjct: 16 RRIGCIHFVGIGGAGMCGIAEVLLNLGYEVSGSDLKASPVTARLESFGAKIFIGHRAENA 75
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
D +V SSA+ N E++ A +P+ R LA+L + IAV+G+HGK
Sbjct: 76 ASAD------VLVVSSAVNSSNPEVMTALERRIPVVPRAEMLAELMRYRHGIAVAGTHGK 129
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+TT S++A V A G D T ++G + + G + + EADE D FL L P V
Sbjct: 130 TTTTSLIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGSSRYLIAEADESDASFLHLQPMV 188
Query: 253 AVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
AVVTN+D +H+D +E D +K F FL + G V+C D R +L + + T
Sbjct: 189 AVVTNIDADHMDTYEGDFSRLKKTFVDFLHNLPFYGLAVLCVDDPVVREILPLVARPT-- 246
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPL 369
ITYG D A + Q G + + + + R
Sbjct: 247 -----------------------ITYGLGEDADIRAVDI---RQAGMRTYFTVLRQERAP 280
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
++S+ +PGVHNVLN+LA IA + + A ++ LS F GV RRF + G +
Sbjct: 281 LEMSVNMPGVHNVLNALATIAIACD------EGIDDTAIVQ-GLSGFQGVGRRFQVYGEL 333
Query: 430 Y----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
G + DD+ HHP EV AVL+A R +P++ L+ V+QPH ++R L +DF LS
Sbjct: 334 QIEGGGVMLVDDYGHHPREVAAVLKAVRGGWPDRRLVMVYQPHRFTRTRDLYEDFVQILS 393
Query: 486 EADQVVVSAV 495
+A+ +++ V
Sbjct: 394 DANVLLLMEV 403
>gi|197116890|ref|YP_002137317.1| UDP-N-acetylmuramate--L-alanine ligase [Geobacter bemidjiensis Bem]
gi|226706323|sp|B5EBQ2.1|MURC_GEOBB RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|197086250|gb|ACH37521.1| UDP-N-acetylmuramate--alanine ligase [Geobacter bemidjiensis Bem]
Length = 461
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 148/419 (35%), Positives = 218/419 (52%), Gaps = 42/419 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+S +A++ L G++VSGSDL S + L G + GH+ N+ D
Sbjct: 8 IHFVGIGGIGMSGIAEVLLNLGYKVSGSDLRGSEITQRLESLGGEIFFGHAAENVANAD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSA+ DN E++ A +P+ R LA+L IAV+G+HGK+TT S
Sbjct: 67 -----VVVISSAVHDDNPEVVEAHLRLIPVIPRAEMLAELMRMKYGIAVAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A +L G D T ++G + + G G+ V EADE DG FL LSP++AVVTN
Sbjct: 122 MVATILSKGGIDPTIVIGGRLNSLGTNARL-GQGQFLVAEADESDGSFLLLSPTIAVVTN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D +H+D + + +K F F+ +I G V+C D+ +L ++K+
Sbjct: 181 IDADHLDFYSGIEEIKDTFVEFINKIPFYGLAVLCLDNGNIADVLPRVKK---------- 230
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPLAQISLQI 376
+ +YG S+ D+ A V + G + ++ +G L +I+ +
Sbjct: 231 ---------------RFTSYGMSAQADFRATDV--KLSGFSTSFVAHHKGVRLGEITFSM 273
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG HNVLN+LA IA + L E A F GV RRF L G G + D
Sbjct: 274 PGAHNVLNALAAIAVAMELDIPFETIQEGFAG-------FGGVGRRFHLKGEANGIMVVD 326
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+ HHPTE++A L AA+ F L+ VFQPH YSR L ++F A +AD ++++ +
Sbjct: 327 DYGHHPTEIKATLGAAKAGFAENRLVVVFQPHRYSRTKELFEEFVKAFHDADVLILTDI 385
>gi|51246749|ref|YP_066633.1| UDP-N-acetylmuramate-alanine ligase [Desulfotalea psychrophila
LSv54]
gi|59798231|sp|Q6AJ54.1|MURC_DESPS RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|50877786|emb|CAG37626.1| probable UDP-N-acetylmuramate-alanine ligase [Desulfotalea
psychrophila LSv54]
Length = 459
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 149/419 (35%), Positives = 224/419 (53%), Gaps = 41/419 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+S +A+L L G+ VSGSDL S+ + L + GA ++ GH ++ G
Sbjct: 8 IHFVGIGGIGMSGIAELLLHLGYSVSGSDLRSSATTKRLQDLGATIYEGHQAASCAG--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE-KYNLIAVSGSHGKSTTA 196
+ VV SSA+ +DN E++ A+ +P+ R LA+L K IAV+GSHGK++T
Sbjct: 65 ---ASVVVTSSAVAEDNPEVVQAREDKIPVIPRAEMLAELMRLKTFGIAVAGSHGKTSTT 121
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
S++ +L G D T +VG V F G+ G G V EADE DG FL LSP + VVT
Sbjct: 122 SLIGCLLSQTGFDPTIVVGGKVDSF-GGNAKLGEGDFLVAEADESDGSFLKLSPVLEVVT 180
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N+D EH+D + D + +K F F+ +I G ++C D + ++L Q+++
Sbjct: 181 NIDLEHLDYYTDIEHIKETFLSFIDKIPFYGAAIVCLDDENVAAILPQVQK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++ITYG + D A+++ G S + + G L +IS+
Sbjct: 232 ----------------RLITYGLTPQADVSADNL-RFAAGRSTFRVRAAGEVLGEISVFP 274
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
G HNV N+LA +A L L + L+ F GV RR G G + D
Sbjct: 275 SGTHNVYNALAAVAIGLEL-------EIPFGKIATALASFGGVQRRMQHKGEGKGITVID 327
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHPTE+RA L+A ++ +P K L+ +FQPH YSR L ++F +AD ++++ +
Sbjct: 328 DYAHHPTEIRASLKAIKETWPEKRLVVLFQPHRYSRTQALFEEFKTCFHQADCLIMTDI 386
>gi|347731710|ref|ZP_08864798.1| UDP-N-acetylmuramate--alanine ligase [Desulfovibrio sp. A2]
gi|347519517|gb|EGY26674.1| UDP-N-acetylmuramate--alanine ligase [Desulfovibrio sp. A2]
Length = 455
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 147/426 (34%), Positives = 217/426 (50%), Gaps = 47/426 (11%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
N+ IH VGIGGSG+S +A++ L G+EV GSD+ + + L + GA + IGH N+
Sbjct: 4 NKIKKIHMVGIGGSGMSGIAEVLLNLGYEVCGSDMADGTVVRRLRKLGAEIFIGHGAGNV 63
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
+V S+AI DN E+ A++ G+PI R LA+L IA++G+HGK
Sbjct: 64 TD------AQVLVKSTAIGDDNPEVAAARTRGIPIIPRAEMLAELMRLRTGIAIAGTHGK 117
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+TT S+ A + G D T I+G + + + G G+ + EADE DG FL L P V
Sbjct: 118 TTTTSLAAAIFDEAGTDPTVIIGGRLNAY-GANARLGDGQYLIAEADESDGSFLCLFPIV 176
Query: 253 AVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
VVTN+D +H+D + A+ F F+ ++ G V+CGD R LL ++K+
Sbjct: 177 TVVTNVDMDHMDHYPSLQAIDDAFVDFMNKVPFYGMNVVCGDDPGVRRLLPRVKR----- 231
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESV-CPNVQGGSDYILCERGRPLAQ 371
+ITYGF N AE + C + S + + G + Q
Sbjct: 232 --------------------PVITYGFDELNAIRAEVLACADT---SLFNVIVNGEDIGQ 268
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKL--PLSKFMGVSRRFDLIGTI 429
+ L PG HN+LN+LA I L IA K+ L+KF GV RRF+ G
Sbjct: 269 VRLAQPGRHNILNALAAIGVALEC---------DIAPEKIVAGLAKFGGVGRRFERKGER 319
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
G + DD+ HHP E+ A L ARQ FP++ L+ VFQPH ++R L +F D+
Sbjct: 320 DGVLVVDDYGHHPAEIAATLATARQCFPHRRLVVVFQPHRFTRTQALFGEFCKVFDGVDK 379
Query: 490 VVVSAV 495
++++ +
Sbjct: 380 LLLTEI 385
>gi|415720404|ref|ZP_11467940.1| UDP-N-acetylmuramate--alanine ligase [Gardnerella vaginalis
00703Bmash]
gi|388061903|gb|EIK84540.1| UDP-N-acetylmuramate--alanine ligase [Gardnerella vaginalis
00703Bmash]
Length = 498
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 145/431 (33%), Positives = 229/431 (53%), Gaps = 30/431 (6%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
N G +HF+GIGG+G+S LA++ ++G VSG D S + L E G N+ IG S S++
Sbjct: 15 NSLGSVHFIGIGGAGMSVLAEMLHEEGVSVSGCDSKESDHTSRLEELGINVQIGQSASHV 74
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
+ D +V SSAI +N E++ A GV + R L+ L + V+G+HGK
Sbjct: 75 KNAD------ILVYSSAIKPNNPEVVAAAQNGVKLVHRSDILSLLLSSKKGVTVAGAHGK 128
Query: 193 STTASMLAYVLKAMGD----DLTAIVGAHVPQFPDGSI---FYGGGKNFVLEADEYDGCF 245
+TT+S+LA++LK G D + +G + G + G G V EADE DG F
Sbjct: 129 TTTSSLLAHILKVCGKGDLADPSYAIGGSIQAQGGGEVDGGHAGCGSVMVAEADESDGSF 188
Query: 246 LGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 305
+P +A+VTN++ +H+D +++ ++ F L G +VIC D AR++L+ +
Sbjct: 189 EKYNPYIAIVTNVEADHLDHYKNAQNYRAAFVEHLSHAL--GFIVICADDDGARAVLEDL 246
Query: 306 KQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER 365
D+ LK + S+++S ++ + F + S GS+ +
Sbjct: 247 SDDS-LKKTIAYASSKNSVSCLSNRVKSLVKFAFINHEIEQTGS-------GSESFAIDF 298
Query: 366 GRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
++L IPG+HN N+ A I TL+G + A S F+G SRRFD+
Sbjct: 299 NGDSISVNLMIPGLHNARNACAAI-IAATLLGMNPKDAADGA------SSFLGASRRFDI 351
Query: 426 IGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
G + G + DD+AHHPTE+ A+L+AAR+R+P+ + +FQPH +SR +FA+ALS
Sbjct: 352 RGCVGGVTVVDDYAHHPTEIDALLRAARRRYPDSTIRVLFQPHLFSRTRSFAREFASALS 411
Query: 486 EADQVVVSAVL 496
AD V+V+ +
Sbjct: 412 LADDVIVTGIF 422
>gi|443478287|ref|ZP_21068059.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudanabaena biceps PCC
7429]
gi|443016449|gb|ELS31108.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudanabaena biceps PCC
7429]
Length = 465
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 148/427 (34%), Positives = 220/427 (51%), Gaps = 46/427 (10%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
VDF R HFVGIGG G+SA+A + KQGF VSGSDL + + L + G + GH
Sbjct: 5 VDFSGRP--FHFVGIGGIGMSAIAYILAKQGFTVSGSDLSSNRITQKLQDLGIKIFQGHH 62
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSG 188
N+ D S P VV S+AI Q N E A + +PI R LA L E++ I+V+G
Sbjct: 63 ADNL---DLSNAPQ-VVCSTAINQQNPEFQVALANNLPILHRSDLLAALIEQFQAISVAG 118
Query: 189 SHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGL 248
+HGK+TT+S++ ++L G D + I+G V + G+ G K V EADE DG +
Sbjct: 119 THGKTTTSSLVGFLLLKAGLDPSIIIGGEVSAW-QGNARLGNSKYLVAEADESDGTLVKF 177
Query: 249 SPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQD 308
+ ++TN++ +H D +++ D V IF+ F K+ V +V C D C
Sbjct: 178 RSHIGIITNIELDHPDHYQNLDQVVEIFQTFAKRCDV---VVGCID--CPT--------- 223
Query: 309 TGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP 368
V +N SD ITY S Y + + ++ ERG+
Sbjct: 224 --------VTANIRSD----------ITYSLSEPTADYTVAEVQYNSADTQALVIERGKT 265
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
L +IS+ + G HN+ N+LA IA R + L F+G SRRF++ G
Sbjct: 266 LGRISIGLLGKHNLSNTLAAIAVA-------RYLGVEWPAIAEALPDFVGASRRFEVKGI 318
Query: 429 IYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
G DD+AHHP+E+ A L +ARQ+ + ++A+FQPH YSR ++F+++ +EAD
Sbjct: 319 QNGITFVDDYAHHPSEIMATLASARQQNTSSRVVAIFQPHRYSRTYRFLEEFSHSFTEAD 378
Query: 489 QVVVSAV 495
V+V+ +
Sbjct: 379 MVIVTDI 385
>gi|163782320|ref|ZP_02177318.1| UDP-N-acetylmuramate-alanine ligase [Hydrogenivirga sp. 128-5-R1-1]
gi|159882353|gb|EDP75859.1| UDP-N-acetylmuramate-alanine ligase [Hydrogenivirga sp. 128-5-R1-1]
Length = 467
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 147/411 (35%), Positives = 211/411 (51%), Gaps = 41/411 (9%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
+ + HFVGIGG G+S +A++ L+ ++VSGSD+ + E L GA +HIGH
Sbjct: 2 LREKVKRFHFVGIGGIGMSGIAQILLEMNYDVSGSDIKDNKNTEMLRSKGARIHIGHRAE 61
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N+ S VV SSA+ +DN E+ AK +G+P+ R LA+L + IAVSGSH
Sbjct: 62 NV-----SEDTQVVVYSSAVREDNPELRRAKELGIPVIPRGEMLAELFKLKEGIAVSGSH 116
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT SM+A++L+ G D T I+G + + + G G V EADE DG FL LSP
Sbjct: 117 GKTTTTSMVAHILEEAGFDPTVIIGGILQRLGSNAKL-GRGDLLVSEADESDGSFLKLSP 175
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
+V V+TN+D EH+D + D + + + F +F + G V D R+ + +
Sbjct: 176 AVNVITNIDLEHMDYYRDLEDIVAAFAKFAGSVPFYGFCVANADDPNVRNATSSVTK--- 232
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS-DYILCERGRPL 369
K+IT+G D + +++GG + + +G L
Sbjct: 233 ----------------------KLITFGIEKEADVVGTEL--SIEGGRYAFGVVFKGERL 268
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
+I L I G HNV N+LA A L L ++ L F RR +L G
Sbjct: 269 GKIRLSIGGRHNVYNALAATAVSLEL-------GVPFEVVRSALEGFHNAERRMELKGFF 321
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
G IYDD+ HHPTE+RAV+ A R+ +P + L+ VFQPH YSR L D F
Sbjct: 322 GGVPIYDDYGHHPTEIRAVVSALREMYPGRRLVMVFQPHRYSRTHFLFDSF 372
>gi|42524578|ref|NP_969958.1| UDP-N-acetylmuramate--alanine ligase [Bdellovibrio bacteriovorus
HD100]
gi|48428296|sp|P61676.1|MURC_BDEBA RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|39576787|emb|CAE80951.1| UDP-N-acetylmuramate--alanine ligase [Bdellovibrio bacteriovorus
HD100]
Length = 453
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 140/418 (33%), Positives = 206/418 (49%), Gaps = 41/418 (9%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
HFVG+GG G+ LA+L G +VSGSD ++ E L E G + GH+ SN+ D
Sbjct: 9 HFVGVGGIGMCGLAELLHNIGAKVSGSDQAENANTERLKELGVKVFKGHASSNVGDAD-- 66
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
VV SSAI N EI A++ +P+ R LA++ IAV+G+HGK+TT SM
Sbjct: 67 ----VVVYSSAIQYGNPEISEARARQIPLIPRAEALAEIMRLKRGIAVAGTHGKTTTTSM 122
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
+ + T ++G + + G G+ V EADE DG F LSP +A++TN+
Sbjct: 123 TSAIFLEANLSPTIVIGGRF-ELIKSTAMLGSGEWLVAEADESDGSFHKLSPEIAIITNI 181
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVV 318
D +H++ F+ + V+ F F ++ G +++CGD R + + +
Sbjct: 182 DSDHLEHFKTFENVQKSFHDFALKVPFYGKVIVCGDDPLVRQIFENFPK----------- 230
Query: 319 SNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPG 378
+I+ YGF ND + + L + + L++PG
Sbjct: 231 --------------RILFYGFDEKNDLVVTGEHGHYAVHRNDRLLGTKHLVGEFDLKVPG 276
Query: 379 VHNVLNSLAVI-ATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD 437
HN LN++A I A V I A L ++ GV RRF G G +YDD
Sbjct: 277 RHNALNAVAAICAGVAAGI--------PFATCAKGLQRYEGVDRRFHFKGEKKGIKVYDD 328
Query: 438 FAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
+ HHPTEVRAVLQA R+++P + L+ FQPH YSR DF A EADQV+++ +
Sbjct: 329 YGHHPTEVRAVLQAFREKYPKQRLVVFFQPHRYSRTQHCWHDFTTAFMEADQVLLTDI 386
>gi|255320030|ref|ZP_05361226.1| UDP-N-acetylmuramate--alanine ligase [Acinetobacter radioresistens
SK82]
gi|255302898|gb|EET82119.1| UDP-N-acetylmuramate--alanine ligase [Acinetobacter radioresistens
SK82]
Length = 482
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 146/430 (33%), Positives = 220/430 (51%), Gaps = 51/430 (11%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG+G+ +A++ QG+ VSGSD+ S L E G + IGH+ NI+
Sbjct: 21 RIKQIHFVGIGGAGMCGIAEVLKNQGYCVSGSDIKASKTTAQLEENGIEVFIGHAADNIK 80
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
+ +V S+AI +N E+ A +P+ +R L +L + IAV+G+HGK+
Sbjct: 81 N------ASVLVVSTAIDPENPEVKAAIEQRIPVVRRAEMLGELMRYRHGIAVAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S+L +L G D T ++G + + + G + V EADE D FL L P A
Sbjct: 135 TTTSLLTCMLAEEGMDPTYVIGGLLNRTGVNAAL-GASRYIVAEADESDASFLHLEPMAA 193
Query: 254 VVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
+VTN+D +H+D + D +K F +FL ++ G V+CGD R ++ +I +
Sbjct: 194 IVTNIDADHMDTYGGSFDVLKDTFIQFLHKLPFYGLAVVCGDDANIREIMPRIAR----- 248
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLA 370
++TYGF+ ND A V Q G S + + + R
Sbjct: 249 --------------------PLLTYGFNPDNDIRAVDV---EQDGMRSHFTVLRKDREPL 285
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
++++ PG+HNVLN+LA I G S A + L F GV RRF + G +
Sbjct: 286 RLTINQPGLHNVLNALAAI-------GVATDEGVSDAAIGRALEGFSGVGRRFQVQGE-F 337
Query: 431 GCH-----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
G + DD+ HHP EV A ++AARQ P++ L+ +FQPH +SR DDF + LS
Sbjct: 338 GLEQGTVKLVDDYGHHPKEVEATIKAARQSHPDRRLVMMFQPHRFSRTRDCFDDFVDVLS 397
Query: 486 EADQVVVSAV 495
+ DQ+++ V
Sbjct: 398 QVDQLLLLEV 407
>gi|325663714|ref|ZP_08152118.1| UDP-N-acetylmuramate-L-alanine ligase [Lachnospiraceae bacterium
4_1_37FAA]
gi|325470207|gb|EGC73440.1| UDP-N-acetylmuramate-L-alanine ligase [Lachnospiraceae bacterium
4_1_37FAA]
Length = 459
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 143/419 (34%), Positives = 220/419 (52%), Gaps = 40/419 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG +S LA++ LK+ F V+GSD S L + GA +H G NI +
Sbjct: 12 VHFIGIGGISMSGLAEILLKEHFTVTGSDSKESPLTRHLTDLGAVIHYGQKAENITDD-- 69
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTTA 196
+ VV ++A+ DN E + AK +P+ R L +L Y IAVSG+HGK+TT
Sbjct: 70 ---IDVVVYTAAVHADNPEFIAAKEHQIPMLTRAELLGQLMTNYKTPIAVSGTHGKTTTT 126
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM++++L A D T VG + + G+I G F+ EA EY FL P + ++
Sbjct: 127 SMISHILLAGDTDPTISVGG-ILKIIGGNIRVGHSDVFITEACEYTNSFLDFLPKIGIIL 185
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F+D D ++ F RF + G L+I S + Q +Q
Sbjct: 186 NVEEDHMDFFKDLDDIRHSFHRFAALLPNDGTLII-------NSEISQYEQ--------- 229
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+++ G + +ITYG D+ A+++ + G + L + G +I L +
Sbjct: 230 IIA---------GLNCNVITYGIHHDADYTAQNIQYDNMGNVSFDLIDHGTKKDRIFLSV 280
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
G HNV N+L+ I T TL+G + +K L F G RRF+ GT+ G I D
Sbjct: 281 NGEHNVSNALSAIITG-TLLGIDLEK------IKKGLLSFTGTDRRFEYKGTLDGVTIID 333
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHPTE+ A L AA Q +P++ + +FQPHTY+R +FA AL+ AD V+++ +
Sbjct: 334 DYAHHPTEIEATLSAA-QHYPHREIWCIFQPHTYTRTKAFFHEFAQALTLADHVILADI 391
>gi|363900232|ref|ZP_09326738.1| UDP-N-acetylmuramate-alanine ligase [Oribacterium sp. ACB1]
gi|395209778|ref|ZP_10398806.1| UDP-N-acetylmuramate--L-alanine ligase [Oribacterium sp. ACB8]
gi|361957086|gb|EHL10398.1| UDP-N-acetylmuramate-alanine ligase [Oribacterium sp. ACB1]
gi|394704763|gb|EJF12295.1| UDP-N-acetylmuramate--L-alanine ligase [Oribacterium sp. ACB8]
Length = 465
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/422 (33%), Positives = 218/422 (51%), Gaps = 44/422 (10%)
Query: 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGND 136
W+HF+GIGG +S LA++ +GF+VSGSD+ S E L G ++ NI
Sbjct: 11 WVHFIGIGGISMSGLAEILHDRGFKVSGSDMKASPLTEHLESLGISVQFPQKSENI---- 66
Query: 137 GSRFP--NAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKS 193
P V ++AI +DN E K +P+ R L ++ + Y I VSG+HGK+
Sbjct: 67 ---VPGIELCVYTAAISEDNPEFQEVKRQNIPMMSRAELLGRIMKNYKEAINVSGTHGKT 123
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT SM+ +L D T VG + G++ G F+ EA EY FL P++
Sbjct: 124 TTTSMIGEILMEAQMDPTITVGGMMKDI-GGNLRVGKSDVFLAEACEYTNSFLSFFPTIE 182
Query: 254 VVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 313
VV N++ +H+D F+D + +++ FR+F++++ G L+ D A L+
Sbjct: 183 VVLNVEEDHLDFFKDINDIRASFRKFIEKLPENGILIFNKDIPHAEFFLE---------- 232
Query: 314 SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQIS 373
DL G+ KIIT+G D+ A + + + L E G +++
Sbjct: 233 ----------DLPGR----KIITFGHQD-ADYTANFISYDHFARPSFTLFENGEDRGRVT 277
Query: 374 LQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH 433
L + G HN+ NSL+ IA V IG ++ +K L +F G RRF L G + G
Sbjct: 278 LGVTGEHNIYNSLSAIA-VARAIGIPFET------IKKGLMEFSGTDRRFQLKGEVNGFT 330
Query: 434 IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVS 493
I DD+AHHP E+ A + A+ ++P+K L FQPHTYSR + L DDFA ALS+AD+++++
Sbjct: 331 IIDDYAHHPQEIAATIATAK-KYPHKKLWVAFQPHTYSRTLALMDDFAGALSQADEIILA 389
Query: 494 AV 495
+
Sbjct: 390 DI 391
>gi|227494649|ref|ZP_03924965.1| UDP-N-acetylmuramate--L-alanine ligase [Actinomyces coleocanis DSM
15436]
gi|226831831|gb|EEH64214.1| UDP-N-acetylmuramate--L-alanine ligase [Actinomyces coleocanis DSM
15436]
Length = 455
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 143/417 (34%), Positives = 214/417 (51%), Gaps = 38/417 (9%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
H +G+GG+G+S +A+L L +GF+VSGSD S+ ++ L G +GH D
Sbjct: 6 HLIGVGGAGMSVVAELLLSRGFKVSGSDQADSAGLQRLRSLGIEAFVGH--------DAG 57
Query: 139 RFP--NAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
+ P VV S+A+ + N E+ A+ +P+ R LA + + +AV+G+HGK+TT+
Sbjct: 58 QVPVDATVVVSTAVRETNPELAFAREHNLPVIHRSQALAIAAQGLDFVAVAGAHGKTTTS 117
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
MLA L A G D + VG V F G+ G G+ FV EADE DG FL +P VA+VT
Sbjct: 118 GMLAAALSAAGMDPSFAVGGVVAGFGTGA-HLGQGRFFVAEADESDGSFLNYTPRVALVT 176
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D + +A +++F F+ +I G LV+C D A S L Q TG +
Sbjct: 177 NVEPDHLDHYGSREAFEAVFDEFVTRITADGALVVCADDPGA-SALGQRVLATGRR---- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+W G D + V + G S L G + L +
Sbjct: 232 --------VWSYGLDSSV-----EGAQHLQISEVELHASGSS--FLVSYGDETVAVHLNV 276
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
G+HNVLN+ +A L L S++ + L F G RRF+ G + G ++D
Sbjct: 277 SGLHNVLNATGALAVALDL-------GISLSVMAEALKAFTGTGRRFEFKGEVAGKRLFD 329
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVS 493
D+AHHP+EV A L+ AR ++ +FQPH YSR +FA +L+ ADQVV++
Sbjct: 330 DYAHHPSEVAAALKQARVVVGEGKVVVLFQPHLYSRTRNFAAEFAASLALADQVVLA 386
>gi|188589349|ref|YP_001919591.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium botulinum E3
str. Alaska E43]
gi|229486481|sp|B2UXS3.1|MURC_CLOBA RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|188499630|gb|ACD52766.1| UDP-N-acetylmuramate--alanine ligase [Clostridium botulinum E3 str.
Alaska E43]
Length = 460
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 143/427 (33%), Positives = 232/427 (54%), Gaps = 47/427 (11%)
Query: 70 DF-KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
DF K+R +HF+GIGG +S LA + L G++VSGSD S ++ L +GA+++IGHS
Sbjct: 4 DFIKDRDKKVHFIGIGGISMSGLAAVLLNSGYKVSGSDFKESEILKKLRLSGADIYIGHS 63
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAV 186
NI+ D VV ++AIP++N E+++AK + + R +L + + KYN +A+
Sbjct: 64 EKNIKDVD------LVVYTAAIPENNPELIYAKENNIDLMNRAEFLGNIMKGHKYN-VAI 116
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
SG+HGK+T SML+ + D T +VG + G+ G F+ EA EY FL
Sbjct: 117 SGAHGKTTCTSMLSNITLKANLDPTILVGGEL-DIIGGNFRIGSSDYFITEACEYKRSFL 175
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLV-ICGDSQCARSLLDQI 305
P V V+ N+D +H+D ++D D + F +F I G+L+ GDS+ + +L +
Sbjct: 176 SFFPYVGVILNIDADHLDYYKDIDEITETFGQFADLIPNDGYLIGYIGDSR-VKEILSKA 234
Query: 306 KQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER 365
K +T ++YGF + D A ++ N +G + + + +
Sbjct: 235 KCNT-------------------------LSYGFEN-ADVTARNITFNEKGCASFDVYKH 268
Query: 366 GRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
L ++L PG HN+LN+L+ I ++LI D +++ I C LS+ G +RF+
Sbjct: 269 NDKLFDLTLSNPGEHNILNALSSIC--VSLIFD--VNYDDIIC---GLSECKGAHKRFEY 321
Query: 426 IGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
G + G + DD+AHHP E++A L ++ + P+ VFQPHTY+R L D+F +A
Sbjct: 322 KGEVNGVTVIDDYAHHPVEIKATLNTSK-KIPHNKTFCVFQPHTYTRTKTLFDEFTDAFF 380
Query: 486 EADQVVV 492
+AD+VV+
Sbjct: 381 DADEVVL 387
>gi|419953361|ref|ZP_14469506.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas stutzeri TS44]
gi|387969953|gb|EIK54233.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas stutzeri TS44]
Length = 472
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 153/423 (36%), Positives = 215/423 (50%), Gaps = 45/423 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G+EVSGSDL S+ E L GA++ IGH N+ G D
Sbjct: 7 IHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKESASTERLQSFGAHIFIGHQAGNVAGAD- 65
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSAI N E+ A +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 66 -----VLVVSSAINASNPEVALALEQRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTS 120
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+LA V A G D T ++G + + GG + + EADE D FL L P VAVVTN
Sbjct: 121 LLASVFAAGGLDPTFVIGGRLTAAGTNAQL-GGSRYLIAEADESDASFLHLQPMVAVVTN 179
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ + D +K F FL + G V+C D R +L QI +
Sbjct: 180 IDADHMSTYGGDFGKLKKTFIEFLHNLPFYGLAVLCVDDPVVREILPQIGR--------- 230
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
I TYG S D A ++ +L PL +S+ +
Sbjct: 231 ----------------PITTYGISEDADVRAINIRQEGMRTHFTVLRAGCEPL-DVSVNM 273
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----GC 432
PG HNVLN+LA IA + D+ E+I LS+F GV RRF + G +
Sbjct: 274 PGTHNVLNALATIA----IATDEGIDDEAIV---QGLSQFAGVGRRFQVYGQLPVEGGSV 326
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+ DD+ HHP EV AV++A R +P + L+ V+QPH +SR L DDF L++A+ +++
Sbjct: 327 MLVDDYGHHPREVAAVIKAVRGGWPERRLVMVYQPHRFSRTRDLYDDFVQVLADANVLLL 386
Query: 493 SAV 495
V
Sbjct: 387 MEV 389
>gi|167749944|ref|ZP_02422071.1| hypothetical protein EUBSIR_00912 [Eubacterium siraeum DSM 15702]
gi|167657111|gb|EDS01241.1| UDP-N-acetylmuramate--L-alanine ligase [Eubacterium siraeum DSM
15702]
Length = 461
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 143/428 (33%), Positives = 225/428 (52%), Gaps = 40/428 (9%)
Query: 70 DFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSV 129
DF K +HF+GIGGSG+ LA++ +GF ++GSD + ++ + G +++G
Sbjct: 3 DFLTGKKHVHFIGIGGSGMYPLAQILHSKGFYLTGSDNNETETLKAVRNMGIPVYMGQRA 62
Query: 130 SNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYN-LIAVSG 188
NI+G D +V ++AI DN E++ AK+ GV +R L +T YN + VSG
Sbjct: 63 ENIEGAD------LIVYTAAIMSDNPELIAAKASGVKTVERCELLGLVTSWYNKAVCVSG 116
Query: 189 SHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGL 248
+HGK+TT+SML ++ A DL+ ++G + GS G V EA E+ FL L
Sbjct: 117 THGKTTTSSMLTHMYLAQNVDLSTVIGGKLKAIG-GSGRAGSSDVMVCEACEFSNTFLHL 175
Query: 249 SPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQD 308
P+++++ N+D +H+D F+ D +++ F +F LV+ GD +
Sbjct: 176 FPNISIILNIDADHLDFFKTMDNLRASFTKFCDNTT--DILVVNGDDE------------ 221
Query: 309 TGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP 368
N + G + +IIT+G + N +Y E++ +D+ L E G
Sbjct: 222 -----------NTMRAVKASGFNKQIITFGKTDKNRYYPENIKRISDFQTDFDLMENGSK 270
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
+ +IS+ +PG HNVLN++A A L + + + LS F G RRF+ + T
Sbjct: 271 IERISIHVPGAHNVLNAVAACAAAL-------ATGVTPENINKGLSTFWGAGRRFERLAT 323
Query: 429 IYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
I G + DD+AHHP EV A L+ A+ K + AV QP TYSR L DDFA+AL AD
Sbjct: 324 IGGITVVDDYAHHPAEVAATLKTAKAMQDFKRVWAVHQPFTYSRTYTLMDDFASALEIAD 383
Query: 489 QVVVSAVL 496
+VV++ ++
Sbjct: 384 KVVLTEIM 391
>gi|261253806|ref|ZP_05946379.1| UDP-N-acetylmuramate--alanine ligase [Vibrio orientalis CIP 102891
= ATCC 33934]
gi|417953480|ref|ZP_12596525.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio orientalis CIP
102891 = ATCC 33934]
gi|260937197|gb|EEX93186.1| UDP-N-acetylmuramate--alanine ligase [Vibrio orientalis CIP 102891
= ATCC 33934]
gi|342817081|gb|EGU51968.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio orientalis CIP
102891 = ATCC 33934]
Length = 486
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 141/434 (32%), Positives = 221/434 (50%), Gaps = 65/434 (14%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHF+GIGG+G+S +A++ L +G+++SGSD+ + E L + GA ++IGH+ N
Sbjct: 21 RVKCIHFIGIGGAGMSGIAEVLLNEGYQISGSDIAENPVTERLADKGATIYIGHAEEN-- 78
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
+ VV S+AI ++N EI+ A+S +P+ +R LA+L + IAV+G+HGK+
Sbjct: 79 ----VAKASVVVVSTAINEENPEIIAARSARIPVVRRAEMLAELMRFRHGIAVAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEADEYDGCF 245
TT +++ + G D P F +G + G N + EADE D F
Sbjct: 135 TTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGSSRILIAEADESDASF 185
Query: 246 LGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 304
L L P V++VTN++ +H+D + D + +K F FL + G ++C D R L+ +
Sbjct: 186 LHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAIVCVDDPVVRELIPK 245
Query: 305 IKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE 364
I + ++ITYGFS D + + Q G + +
Sbjct: 246 ISR-------------------------QVITYGFSDDADVRIANYRQDGQQGK-FTVIR 279
Query: 365 RGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIA--CLKLPLSKFMGVSRR 422
+G+ I+L IPG HN LN+ A IA + + IA + ++ G RR
Sbjct: 280 QGKADLDITLNIPGRHNALNASAAIAVA---------TEDDIADEAILSAMAGTQGTGRR 330
Query: 423 FDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKD 478
FD +G + + DD+ HHPTEV +QAAR + +K L+ +FQPH YSR L D
Sbjct: 331 FDHLGEFDTGNGQAMLVDDYGHHPTEVDVTIQAARNGWEDKRLVMIFQPHRYSRTRDLYD 390
Query: 479 DFANALSEADQVVV 492
DFAN L + D +++
Sbjct: 391 DFANVLEQVDVLIM 404
>gi|331087235|ref|ZP_08336305.1| UDP-N-acetylmuramate-L-alanine ligase [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330408921|gb|EGG88382.1| UDP-N-acetylmuramate-L-alanine ligase [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 459
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 143/419 (34%), Positives = 220/419 (52%), Gaps = 40/419 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG +S LA++ LK+ F V+GSD S L + GA +H G NI +
Sbjct: 12 VHFIGIGGISMSGLAEILLKEHFTVTGSDSKESPLTRHLTDLGAVIHYGQKAENITDD-- 69
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTTA 196
+ VV ++A+ DN E + AK +P+ R L +L Y IAVSG+HGK+TT
Sbjct: 70 ---IDVVVYTAAVHADNPEFIAAKEHQLPMLTRAELLGQLMTNYKTPIAVSGTHGKTTTT 126
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM++++L A D T VG + + G+I G F+ EA EY FL P + ++
Sbjct: 127 SMISHILLAGDTDPTISVGG-ILKIIGGNIRVGHSDVFITEACEYTNSFLDFLPKIGIIL 185
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F+D D ++ F RF + G L+I S + Q +Q
Sbjct: 186 NVEEDHMDFFKDLDDIRHSFHRFAALLPKDGTLII-------NSEISQYEQ--------- 229
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+++ G + +ITYG D+ A+++ + G + L + G +I L +
Sbjct: 230 IIA---------GLNCNVITYGIHHDADYTAQNIQYDNMGNVSFDLIDHGTKKDRIFLSV 280
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
G HNV N+L+ I T TL+G + +K L F G RRF+ GT+ G I D
Sbjct: 281 NGEHNVSNALSAIITG-TLLGIDLEK------IKKGLLSFTGTDRRFEYKGTLDGVTIID 333
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHPTE+ A L AA Q +P++ + +FQPHTY+R +FA AL+ AD V+++ +
Sbjct: 334 DYAHHPTEIEATLSAA-QHYPHREIWCIFQPHTYTRTKAFFHEFAQALTLADHVILADI 391
>gi|34499797|ref|NP_904012.1| UDP-N-acetylmuramate--L-alanine ligase [Chromobacterium violaceum
ATCC 12472]
gi|44888169|sp|Q7NQ00.1|MURC_CHRVO RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|34105647|gb|AAQ62001.1| UDP-N-acetylmuramate-alanine ligase [Chromobacterium violaceum ATCC
12472]
Length = 464
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 145/432 (33%), Positives = 216/432 (50%), Gaps = 46/432 (10%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K+R IHFVGIGG G+ +A++ G+ VSGSD+ + + L G + GH +
Sbjct: 1 MKHRVKHIHFVGIGGVGMCGIAEVLHGLGYTVSGSDMADGATTKRLAAEGVRVFFGHDAT 60
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
++G D VV S+A+ DN E+L A+ +P+ R LA+L IA++G+H
Sbjct: 61 YVEGAD------VVVTSTAVKADNPEVLAARDKRIPVIPRALMLAELMRFKQGIAIAGTH 114
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S+ A VL A G D T ++G + + G G+ V EADE D FL L+P
Sbjct: 115 GKTTTTSLTASVLGAAGLDPTFVIGGKLTAAGTNAKL-GLGEFLVAEADESDASFLHLTP 173
Query: 251 SVAVVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
+AVVTN+D +H+D ++ D +K F FL+++ G V+C D R + +++ +
Sbjct: 174 VMAVVTNIDADHMDTYDHSFDKLKQAFVDFLQRMPFYGRAVLCVDDPNVREIRERVTK-- 231
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNV-QGGSDYILCERGRP 368
+ TYG D YAE+V Q D ++
Sbjct: 232 -----------------------PVTTYGLDDSADIYAENVRAAAGQMHFDVVVKNGAIT 268
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
+ L +PG HNVLN+L+ IA L + SI ++ LS+F GV RRF G
Sbjct: 269 RFPLVLNLPGRHNVLNALSAIAIGL-------ECGASIEAIQKGLSEFAGVGRRFQRYGE 321
Query: 429 IYGCH-----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANA 483
+ + DD+ HHP E+ A L A R FP++ L+ FQPH Y+R L +DF
Sbjct: 322 VKAQDGGSFTLIDDYGHHPVEMAATLAAVRGAFPDRRLLLAFQPHRYTRTRDLFEDFVKV 381
Query: 484 LSEADQVVVSAV 495
LS D +++S V
Sbjct: 382 LSGVDALLLSEV 393
>gi|85714977|ref|ZP_01045962.1| UDP-N-acetylmuramate--L-alanine ligase [Nitrobacter sp. Nb-311A]
gi|85698174|gb|EAQ36046.1| UDP-N-acetylmuramate--L-alanine ligase [Nitrobacter sp. Nb-311A]
Length = 467
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 152/427 (35%), Positives = 226/427 (52%), Gaps = 48/427 (11%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G+ V GSD + + L E G + +GH N+ G
Sbjct: 8 GPIHFVGIGGIGMSGIAEVLCNLGYTVQGSDASEGANVARLREKGVKVTVGHKTENVNGA 67
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D +V S+AI +DN E++ A++ +P+ +R LA+L + +A++G+HGK+TT
Sbjct: 68 D------VLVVSTAIKRDNPELMAARAQRIPVVRRAEMLAELMRLKSCVAIAGTHGKTTT 121
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L A D T I G + + + G G V+EADE DG FL L +A+V
Sbjct: 122 TSMVATLLDAGDFDPTVINGGIINAYGTNARL-GAGDWMVVEADESDGTFLKLPTDIAIV 180
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D F+ DAV+ FR F++ + G V+C D ++++ +I+
Sbjct: 181 TNVDAEHLDHFKTFDAVQDAFRSFVENVPFYGFAVMCIDHPVVQTMVGRIE--------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR------PL 369
D +IITYG + D + PN GGS + + R R +
Sbjct: 232 ---------------DRRIITYGQNPQADVRLVDLAPN-GGGSHFKVVFRNRKTDAAHEI 275
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
+ L +PG HN LN+ A IA L I D A ++ L+ F GV RRF G
Sbjct: 276 PDLVLPMPGPHNALNATAAIAVAHELGIPD--------ATIRNALAAFGGVKRRFTKTGE 327
Query: 429 IYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
G I DD+ HHP E+ AVL+AAR+ + ++AV QPH Y+RL L ++F ++AD
Sbjct: 328 WKGVTIIDDYGHHPVEIAAVLKAARESTAGR-VVAVVQPHRYTRLQALFEEFCTCFNDAD 386
Query: 489 QVVVSAV 495
VVV+ V
Sbjct: 387 IVVVAEV 393
>gi|309802481|ref|ZP_07696587.1| UDP-N-acetylmuramate--L-alanine ligase [Bifidobacterium dentium
JCVIHMP022]
gi|308220881|gb|EFO77187.1| UDP-N-acetylmuramate--L-alanine ligase [Bifidobacterium dentium
JCVIHMP022]
Length = 496
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 150/444 (33%), Positives = 230/444 (51%), Gaps = 59/444 (13%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G HF+GIGG+G+S LA++ +QG V GSD S+ E L G + G N++G
Sbjct: 5 GKTHFIGIGGAGMSVLAEMLHEQGVHVDGSDREPSAKTERLQGLGIAVEFGQRAENVEG- 63
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
VV SSAI DN EI+ A G I R LA L + + V+G+HGK+TT
Sbjct: 64 -----ARTVVFSSAIKPDNPEIVAAYEAGERIVHRSDILALLMQSKRAVTVAGAHGKTTT 118
Query: 196 ASMLAYVLKAMGD----DLTAIVGAHVPQFPDGSIFYGG--GKNFVL--EADEYDGCFLG 247
+SMLA++L G+ D + +G + Q DG+ GG GK VL EADE DG F
Sbjct: 119 SSMLAHILVNAGEGELADPSYAIGGSI-QGKDGATLDGGHAGKGSVLVAEADESDGSFAK 177
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P +A++TN + +H+D + E ++ F R G +++CGD A ++L +K
Sbjct: 178 YHPEIAIITNAEADHLDHYGTEAKYRAAFVEHAG--RAGKAVIMCGDDDGALAVLRALKT 235
Query: 308 DTGLKYSGGVVSNQSS----DLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILC 363
+ V S Q S DL G H +I ES + Q G+++ +
Sbjct: 236 EVARHVV--VYSTQPSEDLGDLNGAAH-VRI-------------ESESESAQSGTEHFIL 279
Query: 364 ----------ERGRPLAQISLQIPGVHNVLNSLA-VIATVLTLIGDKRQSHESIACLKLP 412
ER P ++L +PG+HN N+ A ++ATV+ + +R + +
Sbjct: 280 HLPAGLVDVEERRVP---VTLTVPGIHNARNATAALLATVMLGVDVERAAAAA------- 329
Query: 413 LSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSR 472
+ F+G +RRF + G++ + DD+AHHPTE+ A+L AAR+R+P + +FQPH +SR
Sbjct: 330 -TSFLGAARRFQIRGSVNQVTVIDDYAHHPTEIAALLDAARRRYPEAGIHVIFQPHLFSR 388
Query: 473 LVVLKDDFANALSEADQVVVSAVL 496
+ +FA AL++AD V+V+ +
Sbjct: 389 TMFFAREFAEALAKADDVIVTGIF 412
>gi|398993488|ref|ZP_10696437.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM21]
gi|398134674|gb|EJM23815.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM21]
Length = 486
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 153/425 (36%), Positives = 217/425 (51%), Gaps = 49/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G++VSGSDL S E L GA + IGH N D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYDVSGSDLKASPVTERLESFGAQIFIGHRAENAASAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 78 -----VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ ++ D + +K F FL + G V+C D R +L +K+ T
Sbjct: 192 IDADHMATYDGDFNKLKKTFVEFLHNLPFYGLAVVCLDDPVVREILPLVKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDY--ILCERGRPLAQISL 374
+TYGF D A +V QG + +L PL +S+
Sbjct: 245 ------------------VTYGFGDDCDVRAINV--RQQGMQTFFTVLRPEREPL-DVSV 283
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY---- 430
+PG HNVLN+LA I + D+ S E+I LS F GV RRF + G +
Sbjct: 284 NMPGNHNVLNALATIC----IASDEGVSDEAIV---QGLSGFQGVGRRFQVYGELPVEGG 336
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHPTEV AV++A R +P + L+ V+QPH YSR L DDF N L++A+ +
Sbjct: 337 NVMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVNVLADANVL 396
Query: 491 VVSAV 495
++ V
Sbjct: 397 LLMEV 401
>gi|167043602|gb|ABZ08296.1| putative Mur ligase family, catalytic domain protein [uncultured
marine microorganism HF4000_APKG2M17]
Length = 492
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 144/400 (36%), Positives = 213/400 (53%), Gaps = 49/400 (12%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H VG+GG G+S++A++ L +G+EVSGSDL + L + GA + GHS + G
Sbjct: 35 VHMVGVGGIGMSSIAEILLIRGYEVSGSDLAENEVTRHLRDLGARIFKGHSAEYVGG--- 91
Query: 138 SRFPNAVVASSAI-PQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
VV SSA+ P N E L+A+ VP+ +R L +L I ++G+HGK+TT
Sbjct: 92 ---ACVVVHSSAVDPSQNPETLYAEEKHVPVIRRSEMLGELMRMKFGIGIAGTHGKTTTT 148
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
+M +V+ A D T IVG V F ++ G G ++EADEYD FL L+PS+AV+T
Sbjct: 149 TMAGHVVGAGAFDPTIIVGGKVAAFGSNAV-SGEGDIILIEADEYDRTFLRLTPSLAVIT 207
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N+D +H+D +ED + +++ F ++ + G ++C D + R ++ +I
Sbjct: 208 NIDADHLDCYEDLEDIRAAFIQYASSVPFFGAAIVCLDDENVRGIISKI----------- 256
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS----DYILCERGRPLAQI 372
D +++TYG AES+ Q G D I E L ++
Sbjct: 257 --------------DRRVVTYGTLRQAQIRAESIQ---QEGRVMHFDVISSEE--RLGRV 297
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC 432
SL PG HNVLN+LA IA + L E I+ +S F GV RR IG G
Sbjct: 298 SLDAPGRHNVLNALAAIAIGIEL----DMKFEDISA---GISAFQGVDRRMHEIGEARGV 350
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSR 472
+ DD+AHHPTE++A L+AA +P + ++AVFQPH YSR
Sbjct: 351 LVVDDYAHHPTEIKATLEAASGCWPERRIVAVFQPHLYSR 390
>gi|6523805|gb|AAF14862.1|AF110740_1 UDP-N-acetylmuramate:L-alanine ligase MurC [Pseudomonas aeruginosa]
gi|12060818|gb|AAG48251.1|AF306766_1 UDP-N-acetylmuramate:L-alanine ligase MurC [Pseudomonas aeruginosa]
Length = 487
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 152/422 (36%), Positives = 215/422 (50%), Gaps = 45/422 (10%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
HFVGIGG+G+ +A++ L G+EVSGSDL S+ E L + GA + IGH N G D
Sbjct: 26 HFVGIGGAGMCGIAEVLLNLGYEVSGSDLKASAVTERLEKFGAQIFIGHQAENADGAD-- 83
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
+V SSAI + N E+ A +P+ R LA+L + IAV+G+HGK+TT S+
Sbjct: 84 ----VLVVSSAINRANPEVASALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTSL 139
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
+A V A G D T ++G + + G + V EADE D FL L P VAVVTN+
Sbjct: 140 IASVFAAGGLDPTFVIGGRL-NAAGTNAQLGASRYLVAEADESDASFLHLQPMVAVVTNI 198
Query: 259 DWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
D +H+ + D + +K F FL + G V+C D R +L QI + T
Sbjct: 199 DADHMATYGGDFNKLKKTFVEFLHNLPFYGLAVMCVDDPVVREILPQIARPT-------- 250
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
+TYG S D A ++ +L PL +S+ +P
Sbjct: 251 -----------------VTYGLSEDADVRAINIRQEGMRTWFTVLRPEREPL-DVSVNMP 292
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----GCH 433
G+HNVLNSLA I + D+ S E+I LS F GV RRF + G +
Sbjct: 293 GLHNVLNSLATI----VIATDEGISDEAIVQ---GLSGFQGVGRRFQVYGELQVEGGSVM 345
Query: 434 IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVS 493
+ DD+ HHP EV AV++A R +P + L+ V+QPH Y+R L +DF L EA+ +++
Sbjct: 346 LVDDYGHHPREVAAVIKAIRGGWPERRLVMVYQPHRYTRTRDLYEDFVQVLGEANVLLLM 405
Query: 494 AV 495
V
Sbjct: 406 EV 407
>gi|115524121|ref|YP_781032.1| UDP-N-acetylmuramate--L-alanine ligase [Rhodopseudomonas palustris
BisA53]
gi|122296545|sp|Q07PT2.1|MURC_RHOP5 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|115518068|gb|ABJ06052.1| UDP-N-acetylmuramate--L-alanine ligase [Rhodopseudomonas palustris
BisA53]
Length = 467
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 155/429 (36%), Positives = 229/429 (53%), Gaps = 52/429 (12%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G+ V GSD S+ + L E G + +GH N+ G
Sbjct: 8 GPIHFVGIGGIGMSGIAEVLCNLGYTVQGSDASESANVARLREKGIAISVGHKAENVAGA 67
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D VV S+AI +DN E+L A++ +P+ +R LA+L + +A++G+HGK+TT
Sbjct: 68 D------VVVVSTAIKRDNPELLAARAQRIPVVRRAEMLAELMRLKSCVAIAGTHGKTTT 121
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L A D T I G + + + G G+ V+EADE DG FL L VA+V
Sbjct: 122 TSMVAALLDAGEFDPTVINGGIINAYGTNARL-GAGEWMVVEADESDGTFLKLPADVAIV 180
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D F+ +AV++ FR F++ + G V+C D ++L+ +I+
Sbjct: 181 TNVDPEHLDHFKTFEAVQNAFRDFVENVPFYGFAVMCIDHPVVQALVGKIE--------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR------PL 369
D +IITYG + D + PN G S + + R R +
Sbjct: 232 ---------------DRRIITYGENPQADVRLLDLKPN-GGASTFKVAFRDRKANTAHEI 275
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHE---SIACLKLPLSKFMGVSRRFDLI 426
A + L +PG HN LN+ A IA +HE S ++ L+ F GV RRF
Sbjct: 276 ADLKLPMPGRHNALNATAAIAV----------AHELGLSDDTIRKALAGFGGVRRRFTKT 325
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G G I DD+ HHP E+ AVL+AAR+ K +IAV QPH ++RL L ++F ++
Sbjct: 326 GDWNGVSIIDDYGHHPVEIAAVLKAARESTKTK-VIAVVQPHRFTRLQSLFEEFCTCFND 384
Query: 487 ADQVVVSAV 495
AD V+V+ V
Sbjct: 385 ADAVIVAEV 393
>gi|251780203|ref|ZP_04823123.1| UDP-N-acetylmuramate--alanine ligase [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243084518|gb|EES50408.1| UDP-N-acetylmuramate--alanine ligase [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 460
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 143/427 (33%), Positives = 232/427 (54%), Gaps = 47/427 (11%)
Query: 70 DF-KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
DF K+R +HF+GIGG +S LA + L G++VSGSD S ++ L +GA+++IGHS
Sbjct: 4 DFIKDRDKKVHFIGIGGISMSGLAAVLLNSGYKVSGSDFKESEILKKLRLSGADIYIGHS 63
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAV 186
NI+ D VV ++AIP++N E+++AK + + R +L + + KYN +A+
Sbjct: 64 EKNIKDVD------LVVYTAAIPENNPELIYAKENNIDLMNRAEFLGNIMKGHKYN-VAI 116
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
SG+HGK+T SML+ + D T +VG + G+ G F+ EA EY FL
Sbjct: 117 SGAHGKTTCTSMLSNITLKANLDPTILVGGEL-DIIGGNFRIGSSDYFITEACEYKRSFL 175
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLV-ICGDSQCARSLLDQI 305
P V V+ N+D +H+D ++D D + F +F I G+L+ GDS+ + +L +
Sbjct: 176 SFFPYVGVILNIDADHLDYYKDIDEITETFGQFADLIPNDGYLIGYIGDSR-VKEILYKA 234
Query: 306 KQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER 365
K +T ++YGF + D A ++ N +G + + + +
Sbjct: 235 KCNT-------------------------LSYGFEN-ADVTARNITFNEKGCASFDVYKH 268
Query: 366 GRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
L ++L PG HN+LN+L+ I ++LI D +++ I C LS+ G +RF+
Sbjct: 269 NNKLFDLTLSNPGEHNILNALSSIC--VSLIFD--VNYDDIIC---GLSECKGAHKRFEY 321
Query: 426 IGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
G + G + DD+AHHP E++A L ++ + P+ VFQPHTY+R L D+F +A
Sbjct: 322 KGEVNGVTVIDDYAHHPVEIKATLNTSK-KIPHNKTFCVFQPHTYTRTKTLFDEFTDAFF 380
Query: 486 EADQVVV 492
+AD+VV+
Sbjct: 381 DADEVVL 387
>gi|409395386|ref|ZP_11246463.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas sp. Chol1]
gi|409120015|gb|EKM96385.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas sp. Chol1]
Length = 472
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 153/423 (36%), Positives = 215/423 (50%), Gaps = 45/423 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G+EVSGSDL S+ E L GA++ IGH N+ G D
Sbjct: 7 IHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKESASTERLQSFGAHIFIGHQAGNVAGAD- 65
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSAI N E+ A +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 66 -----VLVVSSAINASNPEVALALEQRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTS 120
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+LA V A G D T ++G + + GG + + EADE D FL L P VAVVTN
Sbjct: 121 LLASVFAAGGLDPTFVIGGRLTAAGTNAQL-GGSRYLIAEADESDASFLHLQPMVAVVTN 179
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ + D +K F FL + G V+C D R +L QI + T
Sbjct: 180 IDADHMSTYGGDFGKLKKTFIEFLHNLPFYGLAVLCVDDPVVREILPQIGRPT------- 232
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
TYG S D A ++ +L PL +S+ +
Sbjct: 233 ------------------TTYGISEDADVRAINIRQEGMRTHFTVLRAGCEPL-DVSVNM 273
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----GC 432
PG HNVLN+LA IA + D+ E+I LS+F GV RRF + G +
Sbjct: 274 PGTHNVLNALATIA----IATDEGIDDEAII---QGLSQFAGVGRRFQVYGQLPVEGGSV 326
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+ DD+ HHP EV AV++A R +P + L+ V+QPH +SR L DDF L++A+ +++
Sbjct: 327 MLVDDYGHHPREVAAVIKAVRGGWPERRLVMVYQPHRFSRTRDLYDDFVQVLADANVLLL 386
Query: 493 SAV 495
V
Sbjct: 387 MEV 389
>gi|15599607|ref|NP_253101.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa
PAO1]
gi|116052445|ref|YP_792757.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|218893502|ref|YP_002442371.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa
LESB58]
gi|254244778|ref|ZP_04938100.1| UDP-N-acetylmuramate-alanine ligase [Pseudomonas aeruginosa 2192]
gi|313106941|ref|ZP_07793144.1| UDP-N-acetylmuramate-alanine ligase [Pseudomonas aeruginosa 39016]
gi|355650329|ref|ZP_09056029.1| UDP-N-acetylmuramate-L-alanine ligase [Pseudomonas sp. 2_1_26]
gi|386060563|ref|YP_005977085.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa M18]
gi|386064144|ref|YP_005979448.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa
NCGM2.S1]
gi|420141552|ref|ZP_14649227.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa
CIG1]
gi|421155775|ref|ZP_15615241.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa ATCC
14886]
gi|421162756|ref|ZP_15621563.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa ATCC
25324]
gi|421170160|ref|ZP_15628134.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa ATCC
700888]
gi|421176552|ref|ZP_15634215.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa
CI27]
gi|421182469|ref|ZP_15639945.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa E2]
gi|424944824|ref|ZP_18360587.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas aeruginosa
NCMG1179]
gi|23821886|sp|Q9HW02.1|MURC_PSEAE RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|122257549|sp|Q02H29.1|MURC_PSEAB RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|226711872|sp|B7UZI9.1|MURC_PSEA8 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|9950643|gb|AAG07799.1|AE004856_10 UDP-N-acetylmuramate--alanine ligase [Pseudomonas aeruginosa PAO1]
gi|115587666|gb|ABJ13681.1| UDP-N-acetylmuramate-alanine ligase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126198156|gb|EAZ62219.1| UDP-N-acetylmuramate-alanine ligase [Pseudomonas aeruginosa 2192]
gi|218773730|emb|CAW29544.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas aeruginosa
LESB58]
gi|310879646|gb|EFQ38240.1| UDP-N-acetylmuramate-alanine ligase [Pseudomonas aeruginosa 39016]
gi|346061270|dbj|GAA21153.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas aeruginosa
NCMG1179]
gi|347306869|gb|AEO76983.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa M18]
gi|348032703|dbj|BAK88063.1| UDP-N-acetylmuramate-L-alanine ligase [Pseudomonas aeruginosa
NCGM2.S1]
gi|354826878|gb|EHF11081.1| UDP-N-acetylmuramate-L-alanine ligase [Pseudomonas sp. 2_1_26]
gi|403245694|gb|EJY59475.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa
CIG1]
gi|404519952|gb|EKA30661.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa ATCC
14886]
gi|404524233|gb|EKA34584.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa ATCC
700888]
gi|404530886|gb|EKA40869.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa
CI27]
gi|404533362|gb|EKA43192.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa ATCC
25324]
gi|404542056|gb|EKA51395.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa E2]
Length = 480
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 152/422 (36%), Positives = 215/422 (50%), Gaps = 45/422 (10%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
HFVGIGG+G+ +A++ L G+EVSGSDL S+ E L + GA + IGH N G D
Sbjct: 19 HFVGIGGAGMCGIAEVLLNLGYEVSGSDLKASAVTERLEKFGAQIFIGHQAENADGAD-- 76
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
+V SSAI + N E+ A +P+ R LA+L + IAV+G+HGK+TT S+
Sbjct: 77 ----VLVVSSAINRANPEVASALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTSL 132
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
+A V A G D T ++G + + G + V EADE D FL L P VAVVTN+
Sbjct: 133 IASVFAAGGLDPTFVIGGRL-NAAGTNAQLGASRYLVAEADESDASFLHLQPMVAVVTNI 191
Query: 259 DWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
D +H+ + D + +K F FL + G V+C D R +L QI + T
Sbjct: 192 DADHMATYGGDFNKLKKTFVEFLHNLPFYGLAVMCVDDPVVREILPQIARPT-------- 243
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
+TYG S D A ++ +L PL +S+ +P
Sbjct: 244 -----------------VTYGLSEDADVRAINIRQEGMRTWFTVLRPEREPL-DVSVNMP 285
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----GCH 433
G+HNVLNSLA I + D+ S E+I LS F GV RRF + G +
Sbjct: 286 GLHNVLNSLATI----VIATDEGISDEAIVQ---GLSGFQGVGRRFQVYGELQVEGGSVM 338
Query: 434 IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVS 493
+ DD+ HHP EV AV++A R +P + L+ V+QPH Y+R L +DF L EA+ +++
Sbjct: 339 LVDDYGHHPREVAAVIKAIRGGWPERRLVMVYQPHRYTRTRDLYEDFVQVLGEANVLLLM 398
Query: 494 AV 495
V
Sbjct: 399 EV 400
>gi|152989249|ref|YP_001350319.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas aeruginosa PA7]
gi|189029019|sp|A6VB84.1|MURC_PSEA7 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|150964407|gb|ABR86432.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas aeruginosa PA7]
Length = 480
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 152/422 (36%), Positives = 215/422 (50%), Gaps = 45/422 (10%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
HFVGIGG+G+ +A++ L G+EVSGSDL S+ E L + GA + IGH N G D
Sbjct: 19 HFVGIGGAGMCGIAEVLLNLGYEVSGSDLKASAVTERLEKFGAQIFIGHQAENADGAD-- 76
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
+V SSAI + N E+ A +P+ R LA+L + IAV+G+HGK+TT S+
Sbjct: 77 ----VLVVSSAINRANPEVASALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTSL 132
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
+A V A G D T ++G + + G + V EADE D FL L P VAVVTN+
Sbjct: 133 IASVFAAGGLDPTFVIGGRL-NAAGTNAQLGASRYLVAEADESDASFLHLQPMVAVVTNI 191
Query: 259 DWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
D +H+ + D + +K F FL + G V+C D R +L QI + T
Sbjct: 192 DADHMATYGGDFNKLKKTFVEFLHNLPFYGLAVMCVDDPVVREILPQIARPT-------- 243
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
+TYG S D A ++ +L PL +S+ +P
Sbjct: 244 -----------------VTYGLSEDADVRAINIRQEGMRTWFTVLRPEREPL-DVSVNMP 285
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----GCH 433
G+HNVLNSLA I + D+ S E+I LS F GV RRF + G +
Sbjct: 286 GLHNVLNSLATI----VIATDEGISDEAIVQ---GLSGFQGVGRRFQVYGELQVEGGSVM 338
Query: 434 IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVS 493
+ DD+ HHP EV AV++A R +P + L+ V+QPH Y+R L +DF L EA+ +++
Sbjct: 339 LVDDYGHHPREVAAVIKAIRGGWPERRLVMVYQPHRYTRTRDLYEDFVQVLGEANVLLLM 398
Query: 494 AV 495
V
Sbjct: 399 EV 400
>gi|422604914|ref|ZP_16676929.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
mori str. 301020]
gi|330888571|gb|EGH21232.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas syringae pv.
mori str. 301020]
Length = 486
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 153/425 (36%), Positives = 217/425 (51%), Gaps = 49/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG + +A++ L G+EVSGSDL S+ E L GA + +GH N G D
Sbjct: 19 IHFVGIGGVVMCGIAEVLLNLGYEVSGSDLKGSAVTERLESFGAQIFVGHRAENTVGAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 78 -----VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A V A G D T ++G + + G + + EADE D FL L P V VVTN
Sbjct: 133 LIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVGVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ +E D + +K F FL + G V+C D R +L Q+K+ T
Sbjct: 192 IDADHMATYEGDFNKLKKTFVEFLHNLPFYGLAVMCIDDPVVREILPQVKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLAQISL 374
+TYGFS D A +V Q G + + + R R +S+
Sbjct: 245 ------------------LTYGFSESADIRAINVR---QDGMLTFFTVLRRDREPLDVSV 283
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY---- 430
+PG HNVLNSLA IA + D+ S E+I LS F GV RRF + G +
Sbjct: 284 NMPGNHNVLNSLATIA----IATDEGVSDEAIVQ---GLSGFQGVGRRFQVYGELPVEGG 336
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP EV AV+ A R +P++ L+ V QPH +SR L DDF L++A+ +
Sbjct: 337 NVMLVDDYGHHPREVAAVISAVRGGWPDRRLVMVSQPHRFSRTRDLYDDFVQVLADANVL 396
Query: 491 VVSAV 495
++ V
Sbjct: 397 LLMEV 401
>gi|422011527|ref|ZP_16358335.1| UDP-N-acetylmuramate--L-alanine ligase [Actinomyces georgiae F0490]
gi|394764866|gb|EJF46521.1| UDP-N-acetylmuramate--L-alanine ligase [Actinomyces georgiae F0490]
Length = 464
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 145/425 (34%), Positives = 211/425 (49%), Gaps = 44/425 (10%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G HF+GIGG+G+S +A+L +G VSGSD S +E L G + +GH +++ +
Sbjct: 8 GRYHFIGIGGAGMSVVAELLASRGARVSGSDRADSPVLERLRGLGVTVFVGHDAAHVPAD 67
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
VV S+AI + N E+ A+ G + R LA + V+G+HGK+TT
Sbjct: 68 ------AVVVVSTAIRESNPELAAARGRGQRVVHRSEALALAATGMRFVGVAGAHGKTTT 121
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
+ MLA L++ G D + VG VPQF G+ G G FV EADE DG FL SPSV +V
Sbjct: 122 SGMLAVALRSAGADPSVAVGGTVPQFGSGA-HLGTGDVFVAEADESDGSFLNYSPSVEIV 180
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN++ +H+D + +A +++F F ++ GG LV C + A L +
Sbjct: 181 TNVEPDHLDRYGSREAFEAVFAEFAARLVPGGTLVACAEDPGAARLASHAR--------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGF----SSFNDWYAESVCPNVQGGSDYILCERGRPLAQ 371
G ITYG S D E V G + ++ + A
Sbjct: 232 -------------GRGITTITYGRPGHCSVLPDAVVEDVDSTASGSTARVVWDGQE--AV 276
Query: 372 ISLQIPGVHNVLN-SLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+ L + G HNVLN + A++A + +G + + L+ F G +RRF+ G +
Sbjct: 277 LRLAVAGEHNVLNATAALLAGAVLGVG--------LPEMAAGLASFTGTARRFEERGRVG 328
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
++DD+AHHPTEV A L+ AR + VFQPH YSR + FA AL+ AD V
Sbjct: 329 SRRLFDDYAHHPTEVAAALRQARVVAGGGGVTVVFQPHLYSRTRIFAGRFAEALAAADHV 388
Query: 491 VVSAV 495
VV+ V
Sbjct: 389 VVTDV 393
>gi|330815444|ref|YP_004359149.1| UDP-N-acetylmuramate-alanine ligase [Burkholderia gladioli BSR3]
gi|327367837|gb|AEA59193.1| UDP-N-acetylmuramate-alanine ligase [Burkholderia gladioli BSR3]
Length = 465
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 148/425 (34%), Positives = 217/425 (51%), Gaps = 48/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ + G++VSGSDL ++ E L GA + IGH +NI+G
Sbjct: 8 IHFVGIGGAGMSGIAEVLVNLGYQVSGSDLSRNAVTERLEALGARVAIGHDAANIEG--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
NAVV S+A+ DN E+L A+ + VPI R LA+L IA++G+HGK+TT S
Sbjct: 65 ---ANAVVVSTAVRSDNPEVLAARRLRVPIVPRAVMLAELMRLKQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL A G D T ++G + + G G V EADE D FL L P + V+TN
Sbjct: 122 LVASVLAAGGLDPTFVIGGRLIS-AGANARLGSGDFIVAEADESDASFLNLYPVIEVITN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D +K F F +++ G V+C D R ++ I +
Sbjct: 181 IDEDHMDTYGHDFARLKQAFIEFTQRLPFYGSAVVCVDDPNVRQIIPFISK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++ YG S + AE V G + + G ++ L +
Sbjct: 232 ----------------PVVRYGLSPDAEVRAEQVDAR-DGRMHFTVIRDGLAPLRVVLNL 274
Query: 377 PGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH-- 433
PG+HNV N+LA IA L + D A ++ L+ F GV RRF G +
Sbjct: 275 PGLHNVQNALAAIAIATDLGVAD--------AAIQQALADFNGVGRRFQRYGELAAADGG 326
Query: 434 ---IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP E+ A + AAR FP + L+ FQPH Y+R +DF N LS D +
Sbjct: 327 SYTLIDDYGHHPVEMAATIAAARGAFPGRRLVLAFQPHRYTRTRDCFEDFVNVLSTVDAL 386
Query: 491 VVSAV 495
V++ V
Sbjct: 387 VLTEV 391
>gi|397685944|ref|YP_006523263.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas stutzeri DSM
10701]
gi|395807500|gb|AFN76905.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas stutzeri DSM
10701]
Length = 486
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 154/425 (36%), Positives = 214/425 (50%), Gaps = 51/425 (12%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
HFVGIGG G+ +A++ L G+EVSGSDL S+ E L + GA + IGH N+ G D
Sbjct: 22 HFVGIGGVGMCGIAEVLLNLGYEVSGSDLKESASTERLQKFGAQIFIGHQAGNVAGAD-- 79
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
+V SSAI N E+ A +P+ R LA+L + IAV+G+HGK+TT S+
Sbjct: 80 ----VLVVSSAINSANPEVALALEQRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTSL 135
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
LA V A G D T ++G + + G + + EADE D FL L P VAVVTN+
Sbjct: 136 LASVFAAGGLDPTFVIGGRLTAAGTNAQL-GSSRYLIAEADESDASFLHLQPMVAVVTNI 194
Query: 259 DWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
D +H+ + D +K F FL + G V+C D R +L QI + T
Sbjct: 195 DADHMSTYGGDFGKLKKTFVEFLHNLPFYGLAVLCVDDPVVREILPQIGRPT-------- 246
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER-GRPLAQISLQI 376
TYG S D A ++ +G Y R G +S+++
Sbjct: 247 -----------------TTYGVSDDADVRAINI--RQEGMRTYFTVLRAGFEPVDVSVRM 287
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESI--ACLKLPLSKFMGVSRRFDLIGTIY---- 430
PG HNVLN+LA IA + E I A + LS+F GV RRF + G +
Sbjct: 288 PGKHNVLNALATIAIA---------TDEGIDDAAIVQGLSEFGGVGRRFQVYGELPVEGG 338
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP EV AV+QA R +P + L+ V+QPH +SR L DDF L+EA+ +
Sbjct: 339 NVMLVDDYGHHPREVAAVIQAVRDGWPERRLVMVYQPHRFSRTRDLYDDFVQVLAEANVL 398
Query: 491 VVSAV 495
++ V
Sbjct: 399 LLMEV 403
>gi|254509131|ref|ZP_05121231.1| UDP-N-acetylmuramate--alanine ligase [Vibrio parahaemolyticus 16]
gi|219547928|gb|EED24953.1| UDP-N-acetylmuramate--alanine ligase [Vibrio parahaemolyticus 16]
Length = 486
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 140/432 (32%), Positives = 220/432 (50%), Gaps = 61/432 (14%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHF+GIGG+G+S +A++ L +G+++SGSD+ + + L + GA ++IGH+ N
Sbjct: 21 RVKCIHFIGIGGAGMSGIAEVLLNEGYQISGSDIAENPVTDRLTQKGATVYIGHAEKN-- 78
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
+ VV S+AI ++N E++ A++ +PI +R LA+L + IAV+G+HGK+
Sbjct: 79 ----VAQASVVVVSTAINEENPEVIAARAARIPIVRRAEMLAELMRFRHGIAVAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEADEYDGCF 245
TT +++ + G D P F +G + G N + EADE D F
Sbjct: 135 TTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGSSRILIAEADESDASF 185
Query: 246 LGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 304
L L P V++VTN++ +H+D + D + +K F FL + G ++C D R L+ +
Sbjct: 186 LHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAIVCIDDPVVRELVPR 245
Query: 305 IKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE 364
I + ++ITYGFS D ++ Q G + +
Sbjct: 246 ISR-------------------------QVITYGFSEDADVRIDNYRQEGQQGK-FTVIR 279
Query: 365 RGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFD 424
G+ +I+L IPG HN LN+ A IA + S E+I ++ G RRFD
Sbjct: 280 EGKADLEITLNIPGRHNALNASAAIAVAT----EDDISDEAILN---AMAGTQGTGRRFD 332
Query: 425 LIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
+G + DD+ HHPTEV +QAAR + +K L+ +FQPH YSR L DDF
Sbjct: 333 HLGEFETGNGNAMLVDDYGHHPTEVEVTIQAARNGWEDKRLVMIFQPHRYSRTRDLYDDF 392
Query: 481 ANALSEADQVVV 492
AN L + D +++
Sbjct: 393 ANVLEQVDVLIM 404
>gi|383809874|ref|ZP_09965387.1| UDP-N-acetylmuramate--L-alanine ligase [Rothia aeria F0474]
gi|383447409|gb|EID50393.1| UDP-N-acetylmuramate--L-alanine ligase [Rothia aeria F0474]
Length = 498
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 149/428 (34%), Positives = 215/428 (50%), Gaps = 49/428 (11%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G +HFVG+GG+G+SA+A L + G VSGSD S+ ++ L +AG + + NI
Sbjct: 25 GRVHFVGVGGAGMSAIALLMAQLGVPVSGSDRAESANLQSLRQAGVRVSVPQDAVNIHDV 84
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D VV S+AI +DN E++ A+ +G+P+ R LA + ++AV+G+HGKSTT
Sbjct: 85 D------TVVISTAIHEDNPELVKARELGLPVLHRSEALAAVMGDSQVVAVAGTHGKSTT 138
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN-----------FVLEADEYDGC 244
+SM++ M D L A P F G++ G G N FV EADE DG
Sbjct: 139 SSMISV----MFDGLNA-----KPSFAVGTVIAGFGTNARLGTIGPGSWFVAEADESDGS 189
Query: 245 FLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 304
F+ P VAVVTN++ +H+D + + V F RF+ + G L+ C D A SL Q
Sbjct: 190 FVRYRPKVAVVTNIEPDHIDFYGTAERVYEAFNRFVASMVPDGVLITCADDAGAVSLA-Q 248
Query: 305 IKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE 364
+ GL+ +G+ D + +S + + + + E
Sbjct: 249 RSRAAGLQVL----------TYGESEDADVRLSQITSHGSQSSSVLSWSFDLAGQHYSGE 298
Query: 365 RGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFD 424
+ +++LQ+PGVHN LN+ A AT L+ R + + A L F+G RRF
Sbjct: 299 Q-----ELNLQVPGVHNQLNAAASFAT--ALVAGARPADAASA-----LGGFVGADRRFT 346
Query: 425 LIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANAL 484
L G I G ++DD+AHHPTEV LQ R L VFQPH +SR +FA AL
Sbjct: 347 LRGEIAGIKVFDDYAHHPTEVLCALQTGRTVAGGHNLYVVFQPHLFSRTKEFAQEFAQAL 406
Query: 485 SEADQVVV 492
S AD+ V
Sbjct: 407 SLADRAYV 414
>gi|254253334|ref|ZP_04946652.1| UDP-N-acetylmuramate [Burkholderia dolosa AUO158]
gi|124895943|gb|EAY69823.1| UDP-N-acetylmuramate [Burkholderia dolosa AUO158]
Length = 465
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 148/425 (34%), Positives = 215/425 (50%), Gaps = 48/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ + G+EVSGSDL ++ + L GA + IGH +NI G
Sbjct: 8 IHFVGIGGAGMSGIAEVLVNLGYEVSGSDLSRNAVTDRLEALGARIAIGHDAANIAG--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
NAVV S+A+ DN E+L A+ VPI +R LA+L IA++G+HGK+TT S
Sbjct: 65 ---ANAVVVSTAVRSDNPEVLAARHQRVPIVQRAVMLAELMRLKQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL A G D T ++G + + G G V EADE D FL L P + V+TN
Sbjct: 122 LVASVLAAGGLDPTFVIGGRLIS-AGANARLGTGDFIVAEADESDASFLNLYPVIEVITN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D +K F F +++ G V+C D R ++ I +
Sbjct: 181 IDADHMDTYGHDFARLKQAFIEFTQRLPFYGSAVVCVDDPNVRQIIPFISK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++ YG S AE + G + + GR + L +
Sbjct: 232 ----------------PVVRYGLSPDAQVRAEDIDAR-DGRMHFTVIREGRAPLAVVLNL 274
Query: 377 PGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH-- 433
PG+HNV N+LA IA L + D ++ L++F GV RRF G +
Sbjct: 275 PGLHNVQNALAAIAIATDLGVSDD--------AIQQALAEFNGVGRRFQRYGDVPTADGG 326
Query: 434 ---IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP E+ A + AAR FP + L+ FQPH Y+R DDF N LS D +
Sbjct: 327 RYTLIDDYGHHPVEMAATIAAARGAFPGRRLVLAFQPHRYTRTRDCFDDFVNVLSTVDAL 386
Query: 491 VVSAV 495
V++ V
Sbjct: 387 VLTEV 391
>gi|325578820|ref|ZP_08148867.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus parainfluenzae
ATCC 33392]
gi|325159644|gb|EGC71776.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus parainfluenzae
ATCC 33392]
Length = 475
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 147/465 (31%), Positives = 236/465 (50%), Gaps = 68/465 (14%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+ R IHF+GIGG+G+S +A++ L +G+++SGSD+ + L +AGA + IGH
Sbjct: 11 IIPEMRRVQQIHFIGIGGAGMSGIAEILLNEGYDISGSDIADGVVTQRLAQAGAKIFIGH 70
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
N+QG + VV SSAI +DN E++ AK +P+ +R LA++ + IAV+
Sbjct: 71 QAENVQG------ASVVVVSSAIHEDNPELIAAKQNRIPVIQRAQMLAEIMRFRHGIAVA 124
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEAD 239
G+HGK+TT +M++ + D P F +G + GKN + EAD
Sbjct: 125 GTHGKTTTTAMISMIYTQAKLD---------PTFVNGGLVKSAGKNAHLGASRYLIAEAD 175
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCA 298
E D FL L P V+VVTN++ +H+D +E D + +K+ + +FL + G V+C D
Sbjct: 176 ESDASFLHLQPMVSVVTNIEPDHMDTYEGDFEKMKATYVKFLHNLPFYGLAVMCADDTVL 235
Query: 299 RSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS 358
L+ Q+ + +++TYGFS D++ E G
Sbjct: 236 MELVPQVGR-------------------------QVLTYGFSEHADYHIEDYEQTGFQGH 270
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
++C G + + L +PG HN LN+ A +A K + + A L+ L+ F G
Sbjct: 271 YTVVCPSGERI-NVLLNVPGKHNALNATAALAVA------KEEGIGNEAILE-ALADFQG 322
Query: 419 VSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
RRFD +G + DD+ HHPTEV ++AAR+ + +K ++ +FQPH YSR
Sbjct: 323 AGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVGVTIKAAREGWGDKRIVMIFQPHRYSRTR 382
Query: 475 VLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
L DDF LS+ D +++ L ++A ++ A + +C
Sbjct: 383 DLFDDFVQVLSQVDALIM-------LDVYAAGETPIVGADSKALC 420
>gi|148257416|ref|YP_001242001.1| UDP-N-acetylmuramate--L-alanine ligase [Bradyrhizobium sp. BTAi1]
gi|166222959|sp|A5EPK1.1|MURC_BRASB RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|146409589|gb|ABQ38095.1| UDP-N-acetylmuramate--L-alanine ligase [Bradyrhizobium sp. BTAi1]
Length = 467
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 153/427 (35%), Positives = 227/427 (53%), Gaps = 48/427 (11%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G+ V GSD ++ + L E G + +GH N+ G
Sbjct: 8 GPIHFVGIGGIGMSGIAEVLCNLGYTVQGSDASDNANVARLREKGITVSVGHKAENVAGA 67
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D VV S+AI +DN E++ A++ +P+ +R LA+L + +A++G+HGK+TT
Sbjct: 68 D------VVVVSTAIKRDNPELMTARAQRIPVVRRAEMLAELMRLKSCVAIAGTHGKTTT 121
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L A G D T I G + + + G G V+EADE DG FL L VA+V
Sbjct: 122 TSMVAALLDAGGIDPTVINGGIINAYGTNARL-GAGDWMVVEADESDGTFLKLPADVAIV 180
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D F+ DAV+ FR F++ + G V+C D ++L+ +I+
Sbjct: 181 TNVDPEHLDHFKTFDAVQDAFRAFVENVPFYGFAVMCIDHPVVQALVGKIE--------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR------PL 369
D +IITYG + D + P G S + + R R +
Sbjct: 232 ---------------DRRIITYGVNPQADVRLVDLSP-ANGSSRFKVVFRDRKSGATHEI 275
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
+ I+L +PG HN N+ A IA L I D+ ++ ++ F GV RRF G
Sbjct: 276 SDITLPMPGRHNASNATAAIAVAHELGISDE--------AIRKAIAGFGGVKRRFTRTGE 327
Query: 429 IYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
G I DD+ HHP E+ AVL+AAR+ K +IAV QPH Y+RL L ++F ++AD
Sbjct: 328 WNGVTIIDDYGHHPVEIAAVLKAARESTSGK-VIAVVQPHRYTRLQSLFEEFCTCFNDAD 386
Query: 489 QVVVSAV 495
V+V+ V
Sbjct: 387 AVIVADV 393
>gi|358067940|ref|ZP_09154412.1| UDP-N-acetylmuramate-alanine ligase [Johnsonella ignava ATCC 51276]
gi|356693909|gb|EHI55578.1| UDP-N-acetylmuramate-alanine ligase [Johnsonella ignava ATCC 51276]
Length = 459
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 157/434 (36%), Positives = 230/434 (52%), Gaps = 53/434 (12%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DF N+ IHF+GIGG +S LAK+ +K+GF++SGSD + S L GA + GH
Sbjct: 4 IDF-NKPEHIHFIGIGGISMSGLAKILIKRGFKISGSDTLPGSICTELEGEGAYICYGHK 62
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVS 187
NI + G VV ++AI +DN E A S+ +P+ R LA+L E Y IAVS
Sbjct: 63 AENITADTG-----CVVFTAAIKEDNPEYGRAISLNIPLLSRAELLAQLMENYKYSIAVS 117
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK++ SML+Y+L G D T +G + G+I G G+ F+ EA EY FL
Sbjct: 118 GTHGKTSVTSMLSYILVKAGLDPTISLGGML-DLIGGNIHIGAGEIFLTEACEYKNSFLE 176
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
L P + ++ N++ +H+D F++ D +++ F+ F+ I G LVI S + I +
Sbjct: 177 LKPYIGIILNIEEDHLDFFDNIDDIRNSFKIFINNISDNGILVI-------NSEIKDIDE 229
Query: 308 DT-GLKYSGGVVSNQSSDLWGQGHDYK---IITYGFSSFNDWYAESVCPNVQGGSDYILC 363
T G K S + + SD++ D+ I +Y ++F D
Sbjct: 230 LTAGFKGSVVLYGGKESDIYADNIDFDSHGIASYNITAFKD------------------- 270
Query: 364 ERGRPLAQISLQIPGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRR 422
L + L + G HNV NSLA A L L IG I + L ++ GV RR
Sbjct: 271 ----ELGHVQLGVMGRHNVDNSLAAAAASLKLGIG--------IEDILKGLQEYRGVGRR 318
Query: 423 FDLIGTIYG-CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFA 481
+ G I G +I+DD+AHHP E+ A L A ++P+K L+ VFQPHTYSR +DFA
Sbjct: 319 LEFKGCIGGNINIFDDYAHHPQEIMASLSAI-SKYPHKRLVCVFQPHTYSRTKAFLNDFA 377
Query: 482 NALSEADQVVVSAV 495
N+L+ AD V++S +
Sbjct: 378 NSLAMADLVILSDI 391
>gi|306822431|ref|ZP_07455809.1| UDP-N-acetylmuramate--L-alanine ligase [Bifidobacterium dentium
ATCC 27679]
gi|304553976|gb|EFM41885.1| UDP-N-acetylmuramate--L-alanine ligase [Bifidobacterium dentium
ATCC 27679]
Length = 532
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 150/444 (33%), Positives = 230/444 (51%), Gaps = 59/444 (13%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G HF+GIGG+G+S LA++ +QG V GSD S+ E L G + G N++G
Sbjct: 41 GKTHFIGIGGAGMSVLAEMLHEQGVHVDGSDREPSAKTERLQGLGIAVEFGQRAENVEG- 99
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
VV SSAI DN EI+ A G I R LA L + + V+G+HGK+TT
Sbjct: 100 -----ARTVVFSSAIKPDNPEIVAAYEAGERIVHRSDILALLMQSKRAVTVAGAHGKTTT 154
Query: 196 ASMLAYVLKAMGD----DLTAIVGAHVPQFPDGSIFYGG--GKNFVL--EADEYDGCFLG 247
+SMLA++L G+ D + +G + Q DG+ GG GK VL EADE DG F
Sbjct: 155 SSMLAHILVNAGEGELADPSYAIGGSI-QGKDGATLDGGHAGKGSVLVAEADESDGSFAK 213
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P +A++TN + +H+D + E ++ F R G +++CGD A ++L +K
Sbjct: 214 YHPEIAIITNAEADHLDHYGTEAKYRAAFVEHAG--RAGKAVIMCGDDDGALAVLRALKT 271
Query: 308 DTGLKYSGGVVSNQSS----DLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILC 363
+ V S Q S DL G H +I ES + Q G+++ +
Sbjct: 272 EVARHVV--VYSTQPSEDLGDLNGAAH-VRI-------------ESESESAQSGTEHFIL 315
Query: 364 ----------ERGRPLAQISLQIPGVHNVLNSLA-VIATVLTLIGDKRQSHESIACLKLP 412
ER P ++L +PG+HN N+ A ++ATV+ + +R + +
Sbjct: 316 HLPAGLVDVEERRVP---VTLTVPGIHNARNATAALLATVMLGVDVERAAAAA------- 365
Query: 413 LSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSR 472
+ F+G +RRF + G++ + DD+AHHPTE+ A+L AAR+R+P + +FQPH +SR
Sbjct: 366 -TSFLGAARRFQIRGSVNQVTVIDDYAHHPTEIAALLDAARRRYPEAGIHVIFQPHLFSR 424
Query: 473 LVVLKDDFANALSEADQVVVSAVL 496
+ +FA AL++AD V+V+ +
Sbjct: 425 TMFFAREFAEALAKADDVIVTGIF 448
>gi|424845224|ref|ZP_18269835.1| UDP-N-acetylmuramate--alanine ligase [Jonquetella anthropi DSM
22815]
gi|363986662|gb|EHM13492.1| UDP-N-acetylmuramate--alanine ligase [Jonquetella anthropi DSM
22815]
Length = 477
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 145/421 (34%), Positives = 217/421 (51%), Gaps = 34/421 (8%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
+R IH +G+GG+G+S LA L GF+V+G D+ S Y + EAG +++GH ++
Sbjct: 9 SRVRSIHLMGVGGAGMSGLALLYKALGFQVTGCDMGNSCYTTKVREAGVPVYLGHDPHHL 68
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
+ + + SSAIP DN E++ A+ G+P+ +R L+ L + V+G+HGK
Sbjct: 69 DDHKA----DILAYSSAIPSDNPELVTARERGIPVVQRAELLSLLFNSRCGVGVAGTHGK 124
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+TT SM++ + + G + T +G + + G G V E DE DG F PSV
Sbjct: 125 TTTTSMISLIAERAGLEPTVAIGGELCDIGCNAKL-GNGNVMVAELDESDGSFQFFQPSV 183
Query: 253 AVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
AVVTN+DW+HV+ + +V F FL + G V+CGD R+LL +++
Sbjct: 184 AVVTNVDWDHVNYYPSRQSVVDAFVSFLANVPSDGFEVLCGDDPGVRALLGRLE------ 237
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQI 372
GQ ++ TYG ND+Y ++ GG Y L GR + ++
Sbjct: 238 --------------GQNCQNRV-TYGLEKGNDFYPTNLEQYPGGGMSYTLNRFGRQVGRV 282
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI-YG 431
L + G HN+LNSLA +A L S + L++F GV RR G
Sbjct: 283 RLTVSGTHNLLNSLAALAAGSRL-------GISFDLMVSALNEFHGVKRRLQQKGNAGDD 335
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+YDD+ HHP E++A L A Q FP + L+ VFQPH Y+R L + FA LS+ADQV+
Sbjct: 336 ILVYDDYGHHPNELKATLTALGQMFPKRRLVVVFQPHRYTRTAALYEQFAQVLSQADQVI 395
Query: 492 V 492
+
Sbjct: 396 L 396
>gi|39998159|ref|NP_954110.1| UDP-N-acetylmuramate--L-alanine ligase [Geobacter sulfurreducens
PCA]
gi|48428299|sp|P61679.1|MURC_GEOSL RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|39985105|gb|AAR36460.1| UDP-N-acetylmuramate--alanine ligase [Geobacter sulfurreducens PCA]
Length = 462
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 145/420 (34%), Positives = 219/420 (52%), Gaps = 43/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+S +A++ L G++VSGSDL S + L G + GH N+ D
Sbjct: 8 IHFVGIGGIGMSGIAEVLLNLGYKVSGSDLKQSDTTDRLASLGGEIRFGHGRENVADVD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV S+A+ DN E++ AK +P+ R LA+L IA++G+HGK+TT S
Sbjct: 67 -----VVVTSTAVRDDNPEVVEAKRRMIPVIPRAEMLAELMRMKYGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A VL G D T ++G + + G G+ V EADE DG FL LSP++AVVTN
Sbjct: 122 MVATVLTHGGIDPTIVIGGKLNTLGTNAKL-GQGQFLVAEADESDGSFLKLSPTIAVVTN 180
Query: 258 LDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + + +K F F+ +I G V+C + + +L ++K+
Sbjct: 181 IDADHLDFYTGGIEQIKDTFVDFINKIPFYGLAVLCLEDRNIAEILPRVKK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS-DYILCERGRPLAQISLQ 375
+ +TYG SS D A + ++GG+ ++ +G + ++S
Sbjct: 232 ----------------RFVTYGLSSQADIRATHI--RLEGGTTSFVAHYKGYRMGEVSFS 273
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
+PG HNVLN+LA IA + L Q E A F GV RRF + G + G +
Sbjct: 274 MPGAHNVLNALACIAVAMELDVPFSQIQEGFAT-------FGGVGRRFQVKGEVNGITVV 326
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+ HHP E+RA L A + +P + L+ FQPH +SR L +F +AD +V++ +
Sbjct: 327 DDYGHHPAEIRATLAAGKSGWPERRLVVAFQPHRFSRTRELFAEFVTCFYDADVLVLTDI 386
>gi|399002530|ref|ZP_10705216.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM18]
gi|398124970|gb|EJM14466.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM18]
Length = 486
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 152/424 (35%), Positives = 216/424 (50%), Gaps = 47/424 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G++VSGSDL S E L GA++ IGH N D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYQVSGSDLKASPVTERLESFGAHIFIGHRAENAAAAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 78 -----VLVVSSAVNISNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ ++ D + +K F FL + G V+C D R +L +K+ T
Sbjct: 192 IDADHMATYDGDFNKLKKTFVEFLHNLPFYGLAVVCLDDPVVREILPLVKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER-GRPLAQISLQ 375
+TYGF D A +V QG + R R +S+
Sbjct: 245 ------------------VTYGFGDDADVRAINV--RQQGMQTFFTVLRPDREPLDVSVN 284
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----G 431
+PG HNVLN+LA I + D+ S E+I LS F GV RRF + G +
Sbjct: 285 MPGNHNVLNALATIC----IATDEGVSDEAIVQ---GLSGFQGVGRRFQVYGELPVEGGN 337
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+ HHPTEV AV++A R +P + L+ V+QPH YSR L DDF N L++A+ ++
Sbjct: 338 VMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVNVLADANVLL 397
Query: 492 VSAV 495
+ V
Sbjct: 398 LMEV 401
>gi|409913515|ref|YP_006891980.1| UDP-N-acetylmuramate--L-alanine ligase [Geobacter sulfurreducens
KN400]
gi|298507096|gb|ADI85819.1| UDP-N-acetylmuramate--alanine ligase [Geobacter sulfurreducens
KN400]
Length = 462
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 145/420 (34%), Positives = 219/420 (52%), Gaps = 43/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+S +A++ L G++VSGSDL S + L G + GH N+ D
Sbjct: 8 IHFVGIGGIGMSGIAEVLLNLGYKVSGSDLKQSDTTDRLASLGGEIRFGHGRENVADVD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV S+A+ DN E++ AK +P+ R LA+L IA++G+HGK+TT S
Sbjct: 67 -----VVVTSTAVRDDNPEVVEAKRRMIPVIPRAEMLAELMRMKYGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A VL G D T ++G + + G G+ V EADE DG FL LSP++AVVTN
Sbjct: 122 MVATVLTHGGIDPTIVIGGKLNTLGTNAKL-GQGQFLVAEADESDGSFLKLSPTIAVVTN 180
Query: 258 LDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + + +K F F+ +I G V+C + + +L ++K+
Sbjct: 181 IDADHLDFYTGGIEQIKDTFVDFINKIPFYGLAVLCLEDRNIAEILPRVKK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS-DYILCERGRPLAQISLQ 375
+ +TYG SS D A + ++GG+ ++ +G + ++S
Sbjct: 232 ----------------RFVTYGLSSQADIRATHI--RLEGGTTSFVAHYKGYRMGEVSFS 273
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
+PG HNVLN+LA IA + L Q E A F GV RRF + G + G +
Sbjct: 274 MPGAHNVLNALACIAVAMELDVPFSQIQEGFAT-------FGGVGRRFQVKGEVNGITVV 326
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+ HHP E+RA L A + +P + L+ FQPH +SR L +F +AD +V++ +
Sbjct: 327 DDYGHHPAEIRATLAAGKSGWPERRLVVAFQPHRFSRTRELFAEFVTCFYDADVLVLTDI 386
>gi|389685794|ref|ZP_10177117.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas chlororaphis
O6]
gi|388550136|gb|EIM13406.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas chlororaphis
O6]
Length = 485
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 151/424 (35%), Positives = 216/424 (50%), Gaps = 47/424 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G++VSGSDL S E L GA + IGH N D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYQVSGSDLKASPVTERLESFGAQIFIGHRAENAANAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSA+ N E+ A +P+ R LA+L + +AV+G+HGK+TT S
Sbjct: 78 -----VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGVAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+LA V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LLASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ ++ D + +K F FL + G V+C D R +L Q+K+ T
Sbjct: 192 IDADHMATYDGDFNKLKKTFVEFLHNLPFYGLAVLCLDDPVVREILPQVKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER-GRPLAQISLQ 375
+TYGF+ D A +V QG + R R +S+
Sbjct: 245 ------------------VTYGFNEDADVRAINV--RQQGMQTFFTVLRPDREPLDVSVN 284
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----G 431
+PG HNVLN+LA I + D+ S E+I LS F GV RRF + G +
Sbjct: 285 MPGNHNVLNALATIC----IATDEGISDEAIVQ---GLSGFQGVGRRFQVYGELPVEGGN 337
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+ HHPTEV AV++A R +P + L+ V+QPH +SR L DDF L++A+ ++
Sbjct: 338 VMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRFSRTRDLYDDFVQVLADANVLL 397
Query: 492 VSAV 495
+ V
Sbjct: 398 LMEV 401
>gi|315656825|ref|ZP_07909712.1| UDP-N-acetylmuramate--L-alanine ligase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|315492780|gb|EFU82384.1| UDP-N-acetylmuramate--L-alanine ligase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 499
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 150/453 (33%), Positives = 226/453 (49%), Gaps = 46/453 (10%)
Query: 50 KNSVSVLTNCTFKRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVW 109
K+S + L+N T +F + +GIGG+G+S LA L G++VSGSD V
Sbjct: 5 KDSSTNLSNVTAAHEVPSDQEF-------YLIGIGGAGMSVLALLLHDLGYQVSGSDQVP 57
Query: 110 SSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYK 169
+ + L EAG N+++GH + N VV +SAI +DN E AK++G+ I+
Sbjct: 58 ADTLGQLREAGINVYVGHREEQVPAN------AIVVVTSAIHEDNPEAARAKALGLEIWH 111
Query: 170 RDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYG 229
R L T + L+AV+G+HGK++T+SM+A+ L +G D + +G + G+ G
Sbjct: 112 RSQALDFCTRSHELVAVAGAHGKTSTSSMMAHALLDIGADPSFAIGGIIADLGTGARL-G 170
Query: 230 GGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHL 289
G FV+EADE DG FL SP+V V+TN++ +H+D + A + F F ++R GG L
Sbjct: 171 SGSAFVIEADESDGSFLNYSPAVEVITNIEPDHLDHWGSSAAFEQAFVNFTGRLRKGGTL 230
Query: 290 VICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSS--FNDWYA 347
V+C D + L +Q+ + G ++I+YGF D
Sbjct: 231 VLCADDAGVKRLAEQVSERGGADGP------------------RVISYGFGVPLAGDVVV 272
Query: 348 ESVCPNV---QGGSDYILCERGRPL--AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQS 402
+ P + +G + + G+ + Q++L+I G H +LN+ + L D Q
Sbjct: 273 QLHEPELGPGRGQCQVTITDAGQQVFHGQLNLRIGGQHMLLNAGGALGAAYVLGVDLPQF 332
Query: 403 HESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALI 462
IA L+ F G RR +G G IYDD+ HHPTE+ A LQAAR L+
Sbjct: 333 ---IAALR----TFSGADRRMQPVGERDGVRIYDDYGHHPTEIAATLQAARDLAGKGRLL 385
Query: 463 AVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
FQPH YSR D FA + D + V +V
Sbjct: 386 VCFQPHLYSRTYHNVDAFARVFATVDDLTVCSV 418
>gi|187933070|ref|YP_001884399.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium botulinum B
str. Eklund 17B]
gi|229486482|sp|B2TI04.1|MURC_CLOBB RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|187721223|gb|ACD22444.1| UDP-N-acetylmuramate--alanine ligase [Clostridium botulinum B str.
Eklund 17B]
Length = 460
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 143/427 (33%), Positives = 232/427 (54%), Gaps = 47/427 (11%)
Query: 70 DF-KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
DF K+R +HF+GIGG +S LA + L G++VSGSD S ++ L +GA+++IGHS
Sbjct: 4 DFIKDRDKKVHFIGIGGISMSGLAAVLLNSGYKVSGSDFKESEILKKLRLSGADIYIGHS 63
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAV 186
NI+ D VV ++AIP++N E+++AK + + R +L + + KYN +A+
Sbjct: 64 EKNIKDVD------LVVYTAAIPENNPELIYAKENNIELMNRAEFLGSIMKGHKYN-VAI 116
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
SG+HGK+T SML+ + D T +VG + G+ G F+ EA EY FL
Sbjct: 117 SGAHGKTTCTSMLSNITLKANLDPTILVGGEL-DIIGGNFRIGSSDYFITEACEYKRSFL 175
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLV-ICGDSQCARSLLDQI 305
P V V+ N+D +H+D ++D D + F +F I G+L+ GDS+ + +L +
Sbjct: 176 SFFPYVGVILNIDADHLDYYKDIDEITETFGQFADLIPNDGYLIGYVGDSR-VKEILFKA 234
Query: 306 KQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER 365
K +T ++YGF + D A ++ N +G + + + +
Sbjct: 235 KCNT-------------------------LSYGFEN-ADVTARNITFNEKGCASFDVYKH 268
Query: 366 GRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
L ++L PG HN+LN+L+ I ++LI D +++ I C LS+ G +RF+
Sbjct: 269 NDKLFDLTLSNPGEHNILNALSSIC--VSLIFD--VNYDDIIC---GLSECKGAHKRFEY 321
Query: 426 IGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
G + G + DD+AHHP E++A L ++ + P+ VFQPHTY+R L D+F +A
Sbjct: 322 KGEVNGVTVIDDYAHHPVEIKATLNTSK-KIPHNKTFCVFQPHTYTRTKTLFDEFTDAFF 380
Query: 486 EADQVVV 492
+AD+VV+
Sbjct: 381 DADEVVL 387
>gi|256821915|ref|YP_003145878.1| UDP-N-acetylmuramate--L-alanine ligase [Kangiella koreensis DSM
16069]
gi|256795454|gb|ACV26110.1| UDP-N-acetylmuramate/alanine ligase [Kangiella koreensis DSM 16069]
Length = 489
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 151/466 (32%), Positives = 238/466 (51%), Gaps = 53/466 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG+G+S +A++ L G+EVSGSD+ S E L GA + IGH NI
Sbjct: 24 VHFIGIGGAGMSGIAEVLLNLGYEVSGSDMRESKVTERLKNLGAKIFIGHRSENINE--- 80
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
N VVAS+AIP++N E+ A+ VP+ R LA+L + +AV+G+HGK+TT S
Sbjct: 81 ---VNVVVASTAIPKNNPELEAAREHRVPVVPRAEMLAELMRFRHGVAVAGTHGKTTTTS 137
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A + G D T ++G + + G + F+ EADE D FL + P VAVVTN
Sbjct: 138 LIASIFAEGGLDPTFVIGGLL-NSAGSNARLGTSRFFIAEADESDASFLHIQPMVAVVTN 196
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
++ +H+D + D +++ F FL + G V+C D + + ++ ++ + T
Sbjct: 197 IEADHMDTYGGDFKNLENNFIDFLHNLPFYGLAVMCIDDKTVQEIMPRVTRPT------- 249
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+TYGFS D A + ++ +I+L +
Sbjct: 250 ------------------VTYGFSEDADVRAVDFTQSGTKSHFKVIRRDYDGELEITLNL 291
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----GC 432
PG HNV N+LA IA V T G Q ++ LS+F G+ RRF + G
Sbjct: 292 PGRHNVQNALAAIA-VATEDGVSDQ------AIQKALSEFGGIGRRFQMYGDFKVDGKTI 344
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+ DD+ HHP+EV A ++A R+ +P + L+ V+QPH YSR L +DF+ LSE D +++
Sbjct: 345 TLMDDYGHHPSEVMATIEAMRRSWPERRLVMVYQPHRYSRTRDLYEDFSKVLSEVDALLL 404
Query: 493 SAVLVFWLIIFAVSSFWLIMAINSVICIVRSMLPEKQMIGISMERI 538
L ++A + A + +C RS+ ++ I +E+I
Sbjct: 405 -------LEVYAAGEEPIPGADSRSLC--RSIRQRGKIEPIHVEKI 441
>gi|212702358|ref|ZP_03310486.1| hypothetical protein DESPIG_00371 [Desulfovibrio piger ATCC 29098]
gi|212674236|gb|EEB34719.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfovibrio piger ATCC
29098]
Length = 457
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 141/428 (32%), Positives = 224/428 (52%), Gaps = 45/428 (10%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+D K R+ IH VGIGG+G+S +A++ L G+++SGSD+ S+ ++ L GA + +GH+
Sbjct: 1 MDSKIRQ--IHMVGIGGAGMSGIAEVLLNLGYDISGSDMSDSAVVKHLRSLGARIAVGHA 58
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSG 188
N+ GN +V S+AI +DN E++ A+ + I R LA+L +A++G
Sbjct: 59 AENV-GN-----VQVLVKSTAIAEDNPEVVEARRRNIAIIPRAEMLAELMRLRQGVAIAG 112
Query: 189 SHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGL 248
+HGK+TT S+ A + G D T I+G + + + G G + EADE DG FL L
Sbjct: 113 THGKTTTTSLTASIFDTAGLDPTVIIGGRLNVYGTNA-HLGSGHYLIAEADESDGSFLCL 171
Query: 249 SPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQD 308
P + VVTN+D +H+D + A+ F +F+ ++ G V+CGD R+LL ++K+
Sbjct: 172 FPIINVVTNVDEDHLDHYGTRQAIDDAFVQFMNKVPFYGLNVVCGDDPGVRALLPRVKR- 230
Query: 309 TGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP 368
++TYGF++ N A + + S + + +
Sbjct: 231 ------------------------PVLTYGFAADNQLRAVLLESGMT--SRFEVWRDDQK 264
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
L +++L PG HN+LN+LA I I +R C++ L+ F GV RRF+ G
Sbjct: 265 LGEVTLPHPGRHNILNALAAIGAATAADIPFER-------CVE-GLATFRGVGRRFEFKG 316
Query: 428 TIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
G + DD+ HHP E+ A L ARQ FPN+ L+ FQPH +SR +F
Sbjct: 317 ERNGVTVIDDYGHHPAEIAATLATARQVFPNRRLVVAFQPHRFSRTQAHFGEFCKVFDVV 376
Query: 488 DQVVVSAV 495
DQ+V++ +
Sbjct: 377 DQLVLTEI 384
>gi|399005348|ref|ZP_10707936.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM17]
gi|425901417|ref|ZP_18878008.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas chlororaphis
subsp. aureofaciens 30-84]
gi|397883871|gb|EJL00358.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas chlororaphis
subsp. aureofaciens 30-84]
gi|398126527|gb|EJM15959.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM17]
Length = 485
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 151/424 (35%), Positives = 216/424 (50%), Gaps = 47/424 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G++VSGSDL S E L GA + IGH N D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYQVSGSDLKASPVTERLESFGAQIFIGHRAENAANAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSA+ N E+ A +P+ R LA+L + +AV+G+HGK+TT S
Sbjct: 78 -----VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGVAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+LA V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LLASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ ++ D + +K F FL + G V+C D R +L Q+K+ T
Sbjct: 192 IDADHMATYDGDFNKLKKTFVEFLHNLPFYGLAVLCLDDPVVREILPQVKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER-GRPLAQISLQ 375
+TYGF+ D A +V QG + R R +S+
Sbjct: 245 ------------------VTYGFNEGADVRAINV--RQQGMQTFFTVLRPDREPLDVSVN 284
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----G 431
+PG HNVLN+LA I + D+ S E+I LS F GV RRF + G +
Sbjct: 285 MPGNHNVLNALATIC----IATDEGISDEAIVQ---GLSGFQGVGRRFQVYGELPVDGGN 337
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+ HHPTEV AV++A R +P + L+ V+QPH +SR L DDF L++A+ ++
Sbjct: 338 VMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRFSRTRDLYDDFVQVLADANVLL 397
Query: 492 VSAV 495
+ V
Sbjct: 398 LMEV 401
>gi|257063610|ref|YP_003143282.1| UDP-N-acetylmuramate--alanine ligase [Slackia heliotrinireducens
DSM 20476]
gi|256791263|gb|ACV21933.1| UDP-N-acetylmuramate--alanine ligase [Slackia heliotrinireducens
DSM 20476]
Length = 464
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 148/416 (35%), Positives = 229/416 (55%), Gaps = 48/416 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVG+GG G+S +A++A G +VSGSD+ S+Y + L + G + +GH +N+ N
Sbjct: 8 IHFVGVGGVGMSGIARIAADFGMKVSGSDMASSAYTKQLEDMGIKVFVGHDAANVPEN-- 65
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ VVAS+AIP N EI+ A+ G+ +++R + LA+L +A +G+HGK+TT+S
Sbjct: 66 ---CDVVVASTAIPDTNPEIVAARERGIEVWQRAHMLAELGRGLKTLAAAGTHGKTTTSS 122
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
MLA + A+G D T +VG V + + G G+ +V+EADE DG FL LSP VA+VTN
Sbjct: 123 MLATAIDALGLDPTFVVGGMVDAYKTNAK-SGTGEYYVVEADESDGSFLNLSPYVALVTN 181
Query: 258 LDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDS----QCARSLLDQIKQDTGLK 312
++ +H+D + D ++ F +F+ + G V+ GD + AR+ ++
Sbjct: 182 VEPDHLDHYTGGIDEIRDTFAKFMSSVPDEGACVVFGDDPELVRIARASAKRV------- 234
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQI 372
Y+ G+ G+G+D + Y + + S+ P+ GS+ + C +
Sbjct: 235 YTYGL---------GEGNDIVVSGYSTKGISSTFDLSM-PD---GSN-VTCTLKKN---- 276
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC 432
PG+HN LN+ ++ V L D + E IA + GV RRFDL+G G
Sbjct: 277 ----PGLHNALNAAGILGVVFALGLDVAAAAEGIA-------DYTGVRRRFDLVGEAAGV 325
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
+ DD+AHHPTE++A L AA K + A+FQPH YSR L D+F A ++AD
Sbjct: 326 TVVDDYAHHPTEIKATLSAA-AGLDFKRVFALFQPHRYSRTASLTDEFGKAFADAD 380
>gi|334336802|ref|YP_004541954.1| UDP-N-acetylmuramate--L-alanine ligase [Isoptericola variabilis
225]
gi|334107170|gb|AEG44060.1| UDP-N-acetylmuramate--L-alanine ligase [Isoptericola variabilis
225]
Length = 502
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 147/434 (33%), Positives = 221/434 (50%), Gaps = 48/434 (11%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G +H VG+GG+G+S +A+L +G V GSD +E L G + +GH +++ G
Sbjct: 11 GRVHLVGVGGAGMSVVARLLAARGVPVQGSDAAAGPALEALRGDGVTVWVGHDAAHVVGP 70
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
DG VV SSA+ + N E+ A++ G+ + R LA L +AV+G+HGK+TT
Sbjct: 71 DGEPRVETVVVSSAVRESNPELAAARAAGLRVLHRSEALAALMVGRRAVAVAGAHGKTTT 130
Query: 196 ASMLAYVLKAMGDDLTAIVG----------AHVPQFPDGSIFYGGGKNFVLEADEYDGCF 245
++M+A VL+A G D + +G V P G + G V EADE DG F
Sbjct: 131 SAMVATVLRACGTDASFAIGGTVRVRDAETGEVRAVPGGHL--GASDVLVAEADESDGSF 188
Query: 246 LGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 305
L +P+VAVVTN++ +H+D + DA + F F +I GG LV C D + L
Sbjct: 189 LNYAPTVAVVTNVEADHLDHYGSHDAFRQAFVDFAARIVPGGTLVACADDAGSAEL---- 244
Query: 306 KQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER 365
V+++++ G D ++TYG + + V V G
Sbjct: 245 -----------AVAHRAA-----GRD--VVTYGTA---EAADVRVRDVVVGPGTVRAVVS 283
Query: 366 GRPLA----QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSR 421
G PL + L++PG HN LN+ A + T + L + E++A + F+G R
Sbjct: 284 GGPLGPQPRDLRLELPGAHNALNATAAVVTAVLL---GAEPGEAVAG----AATFVGTGR 336
Query: 422 RFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFA 481
RF+ G G + D + HHPTEV A+L+AAR + ++ +FQPH YSR + D FA
Sbjct: 337 RFEPKGEAAGVRVVDSYDHHPTEVEALLRAARPVAGSGRIVVLFQPHLYSRTRLFADRFA 396
Query: 482 NALSEADQVVVSAV 495
AL+ AD+VVV+ V
Sbjct: 397 AALALADEVVVTGV 410
>gi|343500664|ref|ZP_08738554.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio tubiashii ATCC
19109]
gi|418477394|ref|ZP_13046527.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio tubiashii NCIMB 1337
= ATCC 19106]
gi|342820026|gb|EGU54857.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio tubiashii ATCC
19109]
gi|384575134|gb|EIF05588.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio tubiashii NCIMB 1337
= ATCC 19106]
Length = 486
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 140/434 (32%), Positives = 221/434 (50%), Gaps = 65/434 (14%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHF+GIGG+G+S +A++ L +G+++SGSD+ + E L + GA ++IGH+ N
Sbjct: 21 RVKCIHFIGIGGAGMSGIAEVLLNEGYQISGSDIAENPVTERLTQKGATVYIGHAEEN-- 78
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
+ VV S+AI ++N EI+ A++ +P+ +R LA+L + IAV+G+HGK+
Sbjct: 79 ----VAKASVVVVSTAINEENPEIIAARAARIPVVRRAEMLAELMRFRHGIAVAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEADEYDGCF 245
TT +++ + G D P F +G + G N + EADE D F
Sbjct: 135 TTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGSSRILIAEADESDASF 185
Query: 246 LGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 304
L L P V++VTN++ +H+D + D + +K F FL + G ++C D R L+ +
Sbjct: 186 LHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAIVCIDDPVVRELVPK 245
Query: 305 IKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE 364
I + ++ITYGFS D ++ Q G + +
Sbjct: 246 ISR-------------------------QVITYGFSEDADVRIDNYRQEGQQGK-FTVIR 279
Query: 365 RGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIA--CLKLPLSKFMGVSRR 422
+G+ I+L IPG HN LN+ A IA + + IA + ++ G RR
Sbjct: 280 QGKADLDITLNIPGRHNALNASAAIAVA---------TEDDIADEAILNAMAGTQGTGRR 330
Query: 423 FDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKD 478
FD +G + + DD+ HHPTEV +QAAR + +K L+ +FQPH YSR L D
Sbjct: 331 FDHLGEFDTGNGQAMLVDDYGHHPTEVDVTIQAARNGWKDKRLVMIFQPHRYSRTRDLYD 390
Query: 479 DFANALSEADQVVV 492
DFAN L + D +++
Sbjct: 391 DFANVLEQVDVLIM 404
>gi|260557901|ref|ZP_05830114.1| UDP-N-acetylmuramate-alanine ligase [Acinetobacter baumannii ATCC
19606 = CIP 70.34]
gi|260408692|gb|EEX01997.1| UDP-N-acetylmuramate-alanine ligase [Acinetobacter baumannii ATCC
19606 = CIP 70.34]
gi|452952876|gb|EME58300.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
MSP4-16]
Length = 482
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 150/429 (34%), Positives = 221/429 (51%), Gaps = 49/429 (11%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG+G+ +A++ QG+++SGSD+ S + L E G ++IGH NI+
Sbjct: 21 RIKHIHFVGIGGAGMCGIAEVLANQGYKISGSDIKASKTTQQLEENGIKVYIGHEAENIK 80
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
N +V S+AI +N E+ A +PI +R L +L + IAV+G+HGK+
Sbjct: 81 N------ANVLVVSTAIDPENPEVKAAIEQRIPIVRRAEMLGELMRYRHGIAVAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S+L +L D T ++G + + G + V EADE D FL L P A
Sbjct: 135 TTTSLLTTMLAEENLDPTYVIGGLLNSTGVNAAL-GESRFIVAEADESDASFLYLQPMAA 193
Query: 254 VVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
+VTN+D +H+D +E D +K F +FL + G V+CGD R +L ++ +
Sbjct: 194 IVTNIDADHMDTYEGSFDKLKDTFVQFLHNLPFYGLAVVCGDDANIREILPRVGR----- 248
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLA 370
+ITYGF+ ND A V Q G S + + +GR
Sbjct: 249 --------------------PVITYGFNEDNDIRAIDVE---QDGMRSHFTVLRKGREPL 285
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
++++ PG+HNVLN+LA I D+ S E+I+ L F GV RRF + G
Sbjct: 286 RLTINQPGLHNVLNALAAIGVAT----DEGVSDEAIS---RALKGFSGVGRRFQVQGEFE 338
Query: 431 ----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
+ DD+ HHP EV A ++AARQ P++ L+ +FQPH YSR DDF LS+
Sbjct: 339 LGEGNVKLVDDYGHHPKEVEATIKAARQSHPDRRLVMLFQPHRYSRTRDCYDDFIEVLSQ 398
Query: 487 ADQVVVSAV 495
DQ+++ V
Sbjct: 399 VDQLLLLEV 407
>gi|365840202|ref|ZP_09381403.1| UDP-N-acetylmuramate--L-alanine ligase [Anaeroglobus geminatus
F0357]
gi|364562257|gb|EHM40125.1| UDP-N-acetylmuramate--L-alanine ligase [Anaeroglobus geminatus
F0357]
Length = 461
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 140/419 (33%), Positives = 216/419 (51%), Gaps = 42/419 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG G+ A+A + + +G+ VSGSD S+ L E GA +HIGHS N++ +
Sbjct: 10 IHFIGIGGVGMRAIANIFIDKGYSVSGSDAKESAATARLREKGARVHIGHSADNLKDAE- 68
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
AVV SSAI + N E+ A+ +P+ R L + IAV+G+HGK+TT+S
Sbjct: 69 -----AVVISSAIRRTNEELTAARERRIPVIHRSDALVHIMGWGKAIAVAGAHGKTTTSS 123
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
ML V G D T ++G V S+ G G+ + EADE DG FL P +AV+TN
Sbjct: 124 MLGQVFLESGTDPTLVIGGEVDYLHSNSVL-GKGEYVIAEADESDGSFLKEHPYIAVITN 182
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIR-VGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + V F+ F+ ++ V G V+C D R+LL ++
Sbjct: 183 IDADHMDYYGTLANVIHAFKEFINRLDPVEGLAVLCADDDRVRALLPEV----------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
D +TYG + D+ A ++ +G + + + L ++L +
Sbjct: 232 --------------DRLYVTYGIEAEADYRAGNIGYE-EGKLVFDVFYHEQLLGPLALNV 276
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG HN+LN+LA +A R + LS F G RRF G + + D
Sbjct: 277 PGNHNILNALATVAAA-------RSCGIGFDEIAGALSHFHGAKRRFQTKGHVRDIWVVD 329
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHPTE+ A L AAR ++ ++ +FQPH Y+R +L D+F+ A AD+++++ +
Sbjct: 330 DYAHHPTEINATLSAARSMGTHR-VVCLFQPHRYTRTQLLADEFSRAFVCADKLILTDI 387
>gi|384144971|ref|YP_005527681.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
MDR-ZJ06]
gi|387122228|ref|YP_006288110.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
MDR-TJ]
gi|407930757|ref|YP_006846400.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
TYTH-1]
gi|417544001|ref|ZP_12195087.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC032]
gi|417571331|ref|ZP_12222188.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC189]
gi|417576183|ref|ZP_12227028.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
Naval-17]
gi|417870782|ref|ZP_12515732.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
ABNIH1]
gi|417875372|ref|ZP_12520190.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
ABNIH2]
gi|417883392|ref|ZP_12527639.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
ABNIH4]
gi|421202970|ref|ZP_15660114.1| udp-n-acetylmuramate--l-alanine ligase [Acinetobacter baumannii
AC12]
gi|421533369|ref|ZP_15979654.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
AC30]
gi|421627803|ref|ZP_16068600.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC180]
gi|421668331|ref|ZP_16108371.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC087]
gi|421670198|ref|ZP_16110207.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC099]
gi|421688728|ref|ZP_16128426.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
IS-143]
gi|421705115|ref|ZP_16144556.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
ZWS1122]
gi|421708894|ref|ZP_16148267.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
ZWS1219]
gi|421790694|ref|ZP_16226893.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
Naval-2]
gi|424050599|ref|ZP_17788135.1| UDP-N-acetylmuramate-L-alanine ligase [Acinetobacter baumannii
Ab11111]
gi|424061771|ref|ZP_17799258.1| UDP-N-acetylmuramate-L-alanine ligase [Acinetobacter baumannii
Ab44444]
gi|425754197|ref|ZP_18872064.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
Naval-113]
gi|445484745|ref|ZP_21456780.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
Naval-78]
gi|342226156|gb|EGT91131.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
ABNIH2]
gi|342226849|gb|EGT91802.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
ABNIH1]
gi|342235941|gb|EGU00497.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
ABNIH4]
gi|347595464|gb|AEP08185.1| UDP-N-acetylmuramate--alanine ligase [Acinetobacter baumannii
MDR-ZJ06]
gi|385876720|gb|AFI93815.1| UDP-N-acetylmuramate--alanine ligase [Acinetobacter baumannii
MDR-TJ]
gi|395551779|gb|EJG17788.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC189]
gi|395569404|gb|EJG30066.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
Naval-17]
gi|398327446|gb|EJN43580.1| udp-n-acetylmuramate--l-alanine ligase [Acinetobacter baumannii
AC12]
gi|400381889|gb|EJP40567.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC032]
gi|404560485|gb|EKA65728.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
IS-143]
gi|404669352|gb|EKB37245.1| UDP-N-acetylmuramate-L-alanine ligase [Acinetobacter baumannii
Ab11111]
gi|404675498|gb|EKB43197.1| UDP-N-acetylmuramate-L-alanine ligase [Acinetobacter baumannii
Ab44444]
gi|407189208|gb|EKE60436.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
ZWS1122]
gi|407189622|gb|EKE60848.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
ZWS1219]
gi|407899338|gb|AFU36169.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
TYTH-1]
gi|408709689|gb|EKL54930.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC180]
gi|409988801|gb|EKO44969.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
AC30]
gi|410380769|gb|EKP33349.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC087]
gi|410386756|gb|EKP39224.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC099]
gi|410405319|gb|EKP57360.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
Naval-2]
gi|425497590|gb|EKU63696.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
Naval-113]
gi|444767744|gb|ELW91990.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
Naval-78]
Length = 482
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 151/429 (35%), Positives = 221/429 (51%), Gaps = 49/429 (11%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG+G+ +A++ QG+++SGSD+ S + L E G ++IGH NI+
Sbjct: 21 RIKHIHFVGIGGAGMCGIAEVLANQGYKISGSDIKASKTTQQLEENGIKVYIGHEAENIK 80
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
N +V S+AI +N E+ A VPI +R L +L + IAV+G+HGK+
Sbjct: 81 N------ANVLVVSTAIDPENPEVKAAIEQRVPIVRRAEMLGELMRYRHGIAVAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S+L +L D T ++G + + G + V EADE D FL L P A
Sbjct: 135 TTTSLLTTMLAEENLDPTYVIGGLLNSTGVNAAL-GESRFIVAEADESDASFLYLQPMAA 193
Query: 254 VVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
+VTN+D +H+D +E D +K F +FL + G V+CGD R +L ++ +
Sbjct: 194 IVTNIDADHMDTYEGSFDKLKDTFVQFLHNLPFYGLAVVCGDDANIREILPRVGR----- 248
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLA 370
+ITYGF+ ND A V Q G S + + +GR
Sbjct: 249 --------------------PVITYGFNEDNDIRAIDVE---QDGMRSHFTVLRKGREPL 285
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
++++ PG+HNVLN+LA I D+ S E+I+ L F GV RRF + G
Sbjct: 286 RLTINQPGLHNVLNALAAIGVAT----DEGVSDEAIS---RALKGFSGVGRRFQVQGEFE 338
Query: 431 ----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
+ DD+ HHP EV A ++AARQ P++ L+ +FQPH YSR DDF LS+
Sbjct: 339 LGEGNVKLVDDYGHHPKEVEATIKAARQSHPDRRLVMLFQPHRYSRTRDCFDDFIEVLSQ 398
Query: 487 ADQVVVSAV 495
DQ+++ V
Sbjct: 399 VDQLLLLEV 407
>gi|387813219|ref|YP_005428701.1| UDP-N-acetylmuramate:L-alanine ligase [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|381338231|emb|CCG94278.1| UDP-N-acetylmuramate:L-alanine ligase [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 481
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 149/419 (35%), Positives = 223/419 (53%), Gaps = 49/419 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ QG++VSGSD+ S+ L +++IGH N D
Sbjct: 22 IHFVGIGGAGMSGIAEVLKNQGYDVSGSDIRDSAVTARLRAMDVDVYIGHRAENTDQAD- 80
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSA+ DN E++ A+ VPI R LA++ + IAV+G+HGK+TT S
Sbjct: 81 -----VVVVSSAVAGDNPEVVSARERRVPIVPRAEMLAEIMRYRHGIAVAGTHGKTTTTS 135
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL G D T ++G + + GG + V EADE D FL L+P ++VVTN
Sbjct: 136 LIASVLGEAGLDPTFVIGGKLNSAGTNAQL-GGSRYLVAEADESDASFLHLTPVISVVTN 194
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
++ +H+D + D + +K F FL + G V+C D + ++ +I +
Sbjct: 195 IEADHMDTYGGDVEKLKQTFVDFLHNLPFYGVAVMCVDDDYVQEIIPRISR--------- 245
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFN-DWYAESVCPNVQGGSDYILCER--GRPLAQIS 373
IITYG + + D+ AE++ + G L R GRP Q+
Sbjct: 246 ----------------AIITYGIDNPDADYRAENITSD--GLKTRFLVRRPGGRPDLQVE 287
Query: 374 LQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY--- 430
L++PG HNVLN+LA IA D+ ++I C L + F GV RRF + G
Sbjct: 288 LKMPGRHNVLNALATIAVAT----DEGVDDQAI-CRGL--AGFAGVGRRFQVYGEYQTPK 340
Query: 431 -GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
+ DD+ HHPTEV AV++AAR+ +P + ++ ++QPH Y+R L +DF LSE D
Sbjct: 341 AAATLVDDYGHHPTEVEAVIRAAREAWPQRRIVMLYQPHRYTRTRDLYEDFVRVLSEVD 399
>gi|429729198|ref|ZP_19263878.1| UDP-N-acetylmuramate--L-alanine ligase [Peptostreptococcus
anaerobius VPI 4330]
gi|429145374|gb|EKX88463.1| UDP-N-acetylmuramate--L-alanine ligase [Peptostreptococcus
anaerobius VPI 4330]
Length = 451
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 223/420 (53%), Gaps = 42/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG +SALA++ + +G++V+GSD+ S ++ L GA + IG NI +
Sbjct: 3 VHFIGIGGINMSALAEICINKGYKVTGSDMQDSYLIDHLRSLGAKVVIGQKKENITDD-- 60
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKSTTA 196
N V+ ++AI DN E AK + + R +L ++ +Y N IAVSG+HGK++T
Sbjct: 61 ---INMVIYTAAISNDNEEFQAAKEKNILMINRAAFLGQIMREYKNSIAVSGTHGKTSTT 117
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SML+ + D T +VG ++ G++ G ++F+ EA EY FL +P +++V
Sbjct: 118 SMLSTIFNHAEKDPTILVGGNLSTIG-GNVRIGNSEHFITEACEYVDSFLNFNPFISLVL 176
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F D +K+ F +F K + G +I GDS+ + + +K
Sbjct: 177 NIEEDHLDYFSGLDEIKASFNKFGKLLPEDGFFIINGDSENTKDITFDVKA--------- 227
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+I +G ND + + G + + L +G L + L I
Sbjct: 228 ----------------SVIRFGQKDTNDAIISDISYDENGYARFNLKYKGAALGRFDLSI 271
Query: 377 PGVHNVLN-SLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
G+HNV N + A++A++++ I I +K + ++ GV RRF+ G G +
Sbjct: 272 YGLHNVYNATAAIVASIVSNI--------DIDTIKEGIKEYKGVGRRFEKKGEYKGALVI 323
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHPTE++A L +A+ +K + VFQPHTY+R L D+F+ A AD+V+V+ +
Sbjct: 324 DDYAHHPTEIKATLASAKNLKKDKMWV-VFQPHTYTRTKALFDEFSQAFHAADKVIVADI 382
>gi|421807342|ref|ZP_16243203.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC035]
gi|410416984|gb|EKP68755.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC035]
Length = 482
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 150/429 (34%), Positives = 222/429 (51%), Gaps = 49/429 (11%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG+G+ +A++ QG+++SGSD+ S + L E G ++IGH NI+
Sbjct: 21 RIKHIHFVGIGGAGMCGIAEVLANQGYKISGSDIKASKTTQQLEENGIKVYIGHEAENIK 80
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
N +V S+AI +N E+ A +PI +R L +L + IAV+G+HGK+
Sbjct: 81 N------ANVLVVSTAIDPENPEVKAAIEQRIPIVRRAEMLGELMRYRHGIAVAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S+L +L D T ++G + + G + V EADE D FL L P A
Sbjct: 135 TTTSLLTTMLAEENLDPTYVIGGLLNSTGVNAAL-GESRFIVAEADESDASFLYLQPMAA 193
Query: 254 VVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
+VTN+D +H+D +E D +K F +FL + G V+CGD R +L ++ +
Sbjct: 194 IVTNIDADHMDTYEGSFDKLKDTFVQFLHNLPFYGLAVVCGDDANIREILPRVGR----- 248
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLA 370
+ITYGF++ ND A V Q G S + + +GR
Sbjct: 249 --------------------PVITYGFNADNDIRAIDVE---QDGMRSHFTVLRKGREPL 285
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
++++ PG+HNVLN+LA I D+ S E+I+ L F GV RRF + G
Sbjct: 286 RLTINQPGLHNVLNALAAIGVAT----DEGVSDEAIS---RALKGFSGVGRRFQVQGEFE 338
Query: 431 ----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
+ DD+ HHP EV A ++AARQ P++ L+ +FQPH YSR DDF LS+
Sbjct: 339 LGEGNVKLVDDYGHHPKEVEATIKAARQSHPDRRLVMLFQPHRYSRTRDCFDDFIEVLSQ 398
Query: 487 ADQVVVSAV 495
DQ+++ V
Sbjct: 399 VDQLLLLEV 407
>gi|365538537|ref|ZP_09363712.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio ordalii ATCC 33509]
Length = 486
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 142/443 (32%), Positives = 220/443 (49%), Gaps = 67/443 (15%)
Query: 66 ECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHI 125
+V R IHFVGIGG+G+S +A++ L +G++++GSDL + E L GA ++I
Sbjct: 13 RAMVPEMRRVKCIHFVGIGGAGMSGIAEVLLNEGYQITGSDLASNPVTERLASKGAIIYI 72
Query: 126 GHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIA 185
GH +NI+ + VV S+AI + N E+ A+ +P+ +R LA+L + IA
Sbjct: 73 GHQATNIE------LASVVVVSTAINELNPELKAARERRIPVVRRAEMLAELMRFRHGIA 126
Query: 186 VSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLE 237
V+G+HGK+TT +++ + G D P F +G + G N + E
Sbjct: 127 VAGTHGKTTTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGLSRILIAE 177
Query: 238 ADEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQ 296
ADE D FL L P V++VTN++ +H+D + D + +K F FL + G ++C D
Sbjct: 178 ADESDASFLHLQPMVSIVTNIEADHMDTYGGDFETLKQTFVDFLHNLPFYGQAILCIDDP 237
Query: 297 CARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG 356
R ++ +I + ++ITYGF+ D + Q
Sbjct: 238 VVREIIPRISR-------------------------QVITYGFADDADVRINNYHQQGQQ 272
Query: 357 GSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESI---ACLKLPL 413
G + + +GR I+L IPG HN LN+ A IA + + I A LK +
Sbjct: 273 GH-FTVVRKGRANLDITLNIPGRHNALNASAAIAVA---------TEDDICDEAILK-AM 321
Query: 414 SKFMGVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHT 469
+ G RRFD +G + + DD+ HHPTEV ++AAR + K L+ +FQPH
Sbjct: 322 ASTQGTGRRFDHLGEFDTGNGVVMLVDDYGHHPTEVGVTIKAARSGWQEKRLVMIFQPHR 381
Query: 470 YSRLVVLKDDFANALSEADQVVV 492
YSR L DDFAN L + D +++
Sbjct: 382 YSRTRDLYDDFANVLEQVDVLIM 404
>gi|332872846|ref|ZP_08440811.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
6014059]
gi|332739007|gb|EGJ69869.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
6014059]
Length = 482
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 151/429 (35%), Positives = 221/429 (51%), Gaps = 49/429 (11%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG+G+ +A++ QG+++SGSD+ S + L E G ++IGH NI+
Sbjct: 21 RIKHIHFVGIGGAGMCGIAEVLANQGYKISGSDIKASKTTQQLEENGIKVYIGHEAENIK 80
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
N +V S+AI +N E+ A VPI +R L +L + IAV+G+HGK+
Sbjct: 81 N------ANVLVVSTAIDPENPEVKAAIEQRVPIVRRAEMLGELMRYRHGIAVAGAHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S+L +L D T ++G + + G + V EADE D FL L P A
Sbjct: 135 TTTSLLTTMLAEENLDPTYVIGGLLNSTGVNAAL-GESRFIVAEADESDASFLYLQPMAA 193
Query: 254 VVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
+VTN+D +H+D +E D +K F +FL + G V+CGD R +L ++ +
Sbjct: 194 IVTNIDADHMDTYEGSFDKLKDTFVQFLHNLPFYGLAVVCGDDANIREILPRVGR----- 248
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLA 370
+ITYGF+ ND A V Q G S + + +GR
Sbjct: 249 --------------------PVITYGFNEDNDIRAIDVE---QDGMRSHFTVLRKGREPL 285
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
++++ PG+HNVLN+LA I D+ S E+I+ L F GV RRF + G
Sbjct: 286 RLTINQPGLHNVLNALAAIGVAT----DEGVSDEAIS---RALKGFSGVGRRFQVQGEFE 338
Query: 431 ----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
+ DD+ HHP EV A ++AARQ P++ L+ +FQPH YSR DDF LS+
Sbjct: 339 LGEGNVKLVDDYGHHPKEVEATIKAARQSHPDRRLVMLFQPHRYSRTRDCFDDFIEVLSQ 398
Query: 487 ADQVVVSAV 495
DQ+++ V
Sbjct: 399 VDQLLLLEV 407
>gi|254238926|ref|ZP_04932249.1| UDP-N-acetylmuramate-alanine ligase [Pseudomonas aeruginosa C3719]
gi|126170857|gb|EAZ56368.1| UDP-N-acetylmuramate-alanine ligase [Pseudomonas aeruginosa C3719]
Length = 480
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 154/424 (36%), Positives = 217/424 (51%), Gaps = 49/424 (11%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
HFVGIGG+G+ +A++ L G+EVSGSDL S+ E L + GA + IGH N G D
Sbjct: 19 HFVGIGGAGMCGIAEVLLNLGYEVSGSDLKASAVTERLEKFGAQIFIGHQAENADGAD-- 76
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
+V SSAI + N E+ A +P+ R LA+L + IAV+G+HGK+TT S+
Sbjct: 77 ----VLVVSSAINRANPEVASALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTSL 132
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
++ V A G D T ++G + + G + V EADE D FL L P VAVVTN+
Sbjct: 133 ISSVFAAGGLDPTFVIGGRL-NAAGTNAQLGASRYLVAEADESDASFLHLQPMVAVVTNI 191
Query: 259 DWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
D +H+ + D + +K F FL + G V+C D R +L QI + T
Sbjct: 192 DADHMATYGGDFNKLKKTFVEFLHNLPFYGLAVMCVDDPVVREILPQIARPT-------- 243
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
+TYG S D A ++ +L PL +S+ +P
Sbjct: 244 -----------------VTYGLSEDADVRAINIRQEGMRTWFTVLRPEREPL-DVSVNMP 285
Query: 378 GVHNVLNSLA--VIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----G 431
G+HNVLNSLA VIAT D+ S E+I LS F GV RRF + G +
Sbjct: 286 GLHNVLNSLATIVIAT------DEGISDEAIVQ---GLSGFQGVGRRFQVYGELQVEGGS 336
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+ HHP EV AV++A R +P + L+ V+QPH Y+R L +DF L EA+ ++
Sbjct: 337 VMLVDDYGHHPREVAAVIKAIRGGWPERRLVMVYQPHRYTRTRDLYEDFVQVLGEANVLL 396
Query: 492 VSAV 495
+ V
Sbjct: 397 LMEV 400
>gi|298346709|ref|YP_003719396.1| UDP-N-acetylmuramate--L-alanine ligase [Mobiluncus curtisii ATCC
43063]
gi|298236770|gb|ADI67902.1| UDP-N-acetylmuramate--L-alanine ligase [Mobiluncus curtisii ATCC
43063]
Length = 499
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 150/453 (33%), Positives = 226/453 (49%), Gaps = 46/453 (10%)
Query: 50 KNSVSVLTNCTFKRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVW 109
K+S + L+N T +F + +GIGG+G+S LA L G++VSGSD V
Sbjct: 5 KDSSTNLSNVTAAHEVPSDQEF-------YLIGIGGAGMSVLALLLHDLGYQVSGSDQVP 57
Query: 110 SSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYK 169
+ + L EAG N+++GH + N VV +SAI +DN E AK++G+ I+
Sbjct: 58 ADTLGQLREAGINVYVGHREEQVPAN------AIVVVTSAIHEDNPEAARAKALGLEIWH 111
Query: 170 RDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYG 229
R L T + L+AV+G+HGK++T+SM+A+ L +G D + +G + G+ G
Sbjct: 112 RSQALDFCTRSHELVAVAGAHGKTSTSSMMAHALLDIGADPSFAIGGIIADLGTGARL-G 170
Query: 230 GGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHL 289
G FV+EADE DG FL SP+V V+TN++ +H+D + A + F F ++R GG L
Sbjct: 171 SGSAFVIEADESDGSFLNYSPAVEVITNIEPDHLDHWGSSAAFEQAFVDFTGRLRKGGAL 230
Query: 290 VICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSS--FNDWYA 347
V+C D + L +Q+ + G ++I+YGF D
Sbjct: 231 VLCADDAGVKRLAEQVSERGGADGP------------------RVISYGFGVPLAGDVVV 272
Query: 348 ESVCPNV---QGGSDYILCERGRPL--AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQS 402
+ P + +G + + G+ + Q++L+I G H +LN+ + L D Q
Sbjct: 273 QLHEPELGPGRGQCQVTITDAGQQVFHGQLNLRIGGQHMLLNAGGALGAAYVLGVDLPQF 332
Query: 403 HESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALI 462
IA L+ F G RR +G G IYDD+ HHPTE+ A LQAAR L+
Sbjct: 333 ---IAALR----TFSGADRRMQPVGERDGVRIYDDYGHHPTEIAATLQAARDLAGKGRLL 385
Query: 463 AVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
FQPH YSR D FA + D + V +V
Sbjct: 386 VCFQPHLYSRTYHNVDAFARVFATVDDLTVCSV 418
>gi|189501426|ref|YP_001960896.1| UDP-N-acetylmuramate--L-alanine ligase [Chlorobium phaeobacteroides
BS1]
gi|226711862|sp|B3EQB7.1|MURC_CHLPB RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|189496867|gb|ACE05415.1| UDP-N-acetylmuramate/alanine ligase [Chlorobium phaeobacteroides
BS1]
Length = 465
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 150/420 (35%), Positives = 227/420 (54%), Gaps = 40/420 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H VGIGG+G+SA+A+L LK GF V+GSDLV S L + GA + +GHS NI D
Sbjct: 9 VHIVGIGGAGMSAIAELLLKSGFTVTGSDLVASEVTGKLQDQGAAVALGHSAENIGACDV 68
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ +AV AS +N E+ A G+P+ KRD L +L + I V+G+HGK+TT +
Sbjct: 69 VVYSSAVAAS-----ENEEVAAALQKGIPVIKRDEMLGELMRYKSGICVAGTHGKTTTTA 123
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A +L G+ T ++G + GS G GK V+EADEYD FL L+PS+AV+ +
Sbjct: 124 MIATMLIGAGESPTVMIGG-ISDDLKGSTMVGSGKYMVIEADEYDRAFLKLTPSLAVINS 182
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
L+ EH D + D +A++ F F ++ G + C D R ++ ++ +
Sbjct: 183 LEMEHTDTYADIEALRDAFVAFANKVPFYGRVFCCVDWPEVRKIIPRMNR---------- 232
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
++ TYG D A + V + + + + + +A++S+ P
Sbjct: 233 ---------------RLFTYGIEESADLMARDI-QIVGHETRFTVDYQKQEMARVSIAAP 276
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI-GTIYGCHIYD 436
G HNV N+LA IAT L + + + L+ F G+ RRF ++ G G I D
Sbjct: 277 GRHNVHNALAAIATGLEM-------GLPVDSIVSGLASFSGMRRRFQILYGRAGGPVIVD 329
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAVL 496
D+AHHP+EV+A ++AAR +P +IAVFQPH +SR D++ ALS AD+V V+ V
Sbjct: 330 DYAHHPSEVKAAVKAARAGWPEHEVIAVFQPHLFSRTTAFADEYGWALSNADRVCVADVF 389
>gi|120555362|ref|YP_959713.1| UDP-N-acetylmuramate--L-alanine ligase [Marinobacter aquaeolei VT8]
gi|189028998|sp|A1U3F7.1|MURC_MARAV RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|120325211|gb|ABM19526.1| UDP-N-acetylmuramate--L-alanine ligase [Marinobacter aquaeolei VT8]
Length = 481
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 150/426 (35%), Positives = 227/426 (53%), Gaps = 49/426 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ QG++VSGSD+ S+ L +++IGH N D
Sbjct: 22 IHFVGIGGAGMSGIAEVLKNQGYDVSGSDIRDSAVTARLRAMDVDVYIGHRAENTDQAD- 80
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSA+ DN E++ A+ VPI R LA++ + IAV+G+HGK+TT S
Sbjct: 81 -----VVVVSSAVAGDNPEVVSARERRVPIVPRAEMLAEIMRYRHGIAVAGTHGKTTTTS 135
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL G D T ++G + + GG + V EADE D FL L+P ++VVTN
Sbjct: 136 LIASVLGEAGLDPTFVIGGKLNSAGTNAQL-GGSRYLVAEADESDASFLHLTPVISVVTN 194
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
++ +H+D + D + +K F FL + G V+C D + ++ +I +
Sbjct: 195 IEADHMDTYGGDVEKLKQTFVDFLHNLPFYGVAVMCVDDDYVQEIIPRISR--------- 245
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFN-DWYAESVCPNVQGGSDYILCER--GRPLAQIS 373
IITYG + + D+ AE++ + G L R GRP Q+
Sbjct: 246 ----------------AIITYGIDNPDADYRAENITSD--GLKTRFLVRRPGGRPDLQVE 287
Query: 374 LQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY--- 430
L++PG HNVLN+LA IA D+ ++I C L + F GV RRF + G
Sbjct: 288 LKMPGRHNVLNALATIAVAT----DEGVDDQAI-CRGL--AGFAGVGRRFQVYGEYRTPK 340
Query: 431 -GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
+ DD+ HHPTEV AV++AAR+ +P + ++ ++QPH Y+R L +DF LSE D
Sbjct: 341 AAATLVDDYGHHPTEVEAVIRAAREAWPQRRIVMLYQPHRYTRTRDLYEDFVRVLSEVDG 400
Query: 490 VVVSAV 495
+++ V
Sbjct: 401 LLLMDV 406
>gi|398889458|ref|ZP_10643301.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM55]
gi|398189580|gb|EJM76854.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas sp. GM55]
Length = 486
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 152/424 (35%), Positives = 214/424 (50%), Gaps = 47/424 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G+ VSGSDL S E L GA + IGH N D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYAVSGSDLKASPVTERLESFGAQIFIGHRAENAAAAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 78 -----VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ ++ D + +K F FL + G V+C D R +L +K+ T
Sbjct: 192 IDADHMATYDGDFNKLKKTFVEFLHNLPFYGLAVVCLDDPVVREILPLVKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER-GRPLAQISLQ 375
+TYGF D A +V QG + R R +S+
Sbjct: 245 ------------------VTYGFGEDCDVRAINV--RQQGMQTFFTVLRPDREPLDVSVN 284
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----G 431
+PG HNVLN+LA I + D+ S E+I LS F GV RRF + G +
Sbjct: 285 MPGNHNVLNALATIC----IATDEGVSDEAIV---QGLSGFQGVGRRFQVYGELPVDGGN 337
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+ HHPTEV AV++A R +P + L+ V+QPH YSR L DDF N L++A+ ++
Sbjct: 338 VMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVNVLADANVLL 397
Query: 492 VSAV 495
+ V
Sbjct: 398 LMEV 401
>gi|425743089|ref|ZP_18861182.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
WC-487]
gi|425484553|gb|EKU50954.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
WC-487]
Length = 482
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 151/429 (35%), Positives = 220/429 (51%), Gaps = 49/429 (11%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG+G+ +A++ QG+++SGSD+ S + L E G ++IGH NI+
Sbjct: 21 RIKHIHFVGIGGAGMCGIAEVLANQGYKISGSDIKASKTTQQLEENGIKVYIGHEAENIK 80
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
N +V S+AI +N E+ A PI +R L +L + IAV+G+HGK+
Sbjct: 81 N------ANVLVVSTAIDPENPEVKAAIEQRTPIVRRAEMLGELMRYRHGIAVAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S+L +L D T ++G + + G + V EADE D FL L P A
Sbjct: 135 TTTSLLTTMLAEENLDPTYVIGGLLNSTGVNAAL-GESRFIVAEADESDASFLYLQPMAA 193
Query: 254 VVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
+VTN+D +H+D +E D +K F +FL + G V+CGD R +L ++ +
Sbjct: 194 IVTNIDADHMDTYEGSFDKLKDTFVQFLHNLPFYGLAVVCGDDANIREILPRVGR----- 248
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLA 370
+ITYGF+ ND A V Q G S + + +GR
Sbjct: 249 --------------------PVITYGFNEDNDIRAIDVE---QDGMRSHFTVLRKGREPL 285
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+++L PG+HNVLN+LA I D+ S E+I+ L F GV RRF + G
Sbjct: 286 RLTLNQPGLHNVLNALAAIGVAT----DEGVSDEAIS---RALKGFSGVGRRFQVQGEFE 338
Query: 431 ----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
+ DD+ HHP EV A ++AARQ P++ L+ +FQPH YSR DDF LS+
Sbjct: 339 LGEGNVKLVDDYGHHPKEVEATIKAARQSHPDRRLVMLFQPHRYSRTRDCFDDFIEVLSQ 398
Query: 487 ADQVVVSAV 495
DQ+++ V
Sbjct: 399 VDQLLLLEV 407
>gi|399061139|ref|ZP_10745943.1| UDP-N-acetylmuramate--alanine ligase [Novosphingobium sp. AP12]
gi|398036240|gb|EJL29459.1| UDP-N-acetylmuramate--alanine ligase [Novosphingobium sp. AP12]
Length = 473
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 148/429 (34%), Positives = 229/429 (53%), Gaps = 49/429 (11%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G+ V GSD+ +EGL E G + IG N++G
Sbjct: 9 GTIHFVGIGGIGMSGIAEVMHNLGYSVQGSDIAEGYVVEGLRERGIRVMIGQVAENVEG- 67
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
VV S+A+ +DN E+++A +P+ +R LA+L N +AV+G+HGK+TT
Sbjct: 68 -----AAVVVTSTAVKRDNPEVVYALEHRIPVVRRAEMLAELMRLKNTVAVAGTHGKTTT 122
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L A G D T I G + + + G V+EADE DG FL L ++A+V
Sbjct: 123 TSMVAALLDAGGIDPTVINGGIINSYGSNARL-GASDWMVVEADESDGSFLRLDGTIAIV 181
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D + D +K F F++ + G ++C D ++++ +++
Sbjct: 182 TNIDPEHLDHYGSFDRIKDSFVEFIENVPFYGAAMLCIDHPEVQAIIPKVR--------- 232
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS--DYILCERG---RPLA 370
D +++TYGFS+ D E+V P + GG+ D L +R R +
Sbjct: 233 ---------------DRRVVTYGFSAQADIRGENVTP-IPGGNRFDVALRQRDGTFRRIE 276
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
I L +PG HNV N+LA + + + S +C++ SKF GV RRF +G +
Sbjct: 277 GIELPMPGRHNVQNALAAVGVAVEM-------GCSDSCIQTGFSKFKGVKRRFTNVGEVA 329
Query: 431 ----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
+ DD+ HHP E+RAVL AAR+ + +IAV QPH ++RL ++F A ++
Sbjct: 330 LGGGAVTVIDDYGHHPVEIRAVLAAAREGVKGR-VIAVVQPHRFTRLRDHMEEFQGAFND 388
Query: 487 ADQVVVSAV 495
AD V + V
Sbjct: 389 ADVVYAAPV 397
>gi|388543161|ref|ZP_10146452.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas sp. M47T1]
gi|388278473|gb|EIK98044.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas sp. M47T1]
Length = 484
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 153/430 (35%), Positives = 218/430 (50%), Gaps = 49/430 (11%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
R IHFVGIGG G+ +A++ L G++VSGSDL S+ E L GA + IGH N
Sbjct: 14 RRIRRIHFVGIGGVGMCGIAEVLLNLGYQVSGSDLKASAVTERLQSFGAQIFIGHRAENA 73
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
D +V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK
Sbjct: 74 ATAD------VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGK 127
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+TT S++A V A G D T ++G + + G + + EADE D FL L P V
Sbjct: 128 TTTTSLIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLV 186
Query: 253 AVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
AVVTN+D +H+ + D + +K F FL + G V+C D R +L QI + T
Sbjct: 187 AVVTNIDADHMATYGGDFNKLKKTFVDFLHNLPFYGLAVVCLDDPVVREILPQIARPT-- 244
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPL 369
+TYG S D A ++ Q G + + + R R
Sbjct: 245 -----------------------LTYGVSEEADVRAINIR---QDGMLTYFTVLRRDREP 278
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
+S+ +PG HNVLN+LA IA + D+ S E+I LS F GV RRF + G +
Sbjct: 279 LNVSVNMPGNHNVLNALATIA----IATDEGVSDEAIVQ---GLSGFQGVGRRFQVYGEL 331
Query: 430 Y----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
+ DD+ HHPTEV AV++A R +P + L+ V+QPH YSR L DDF L+
Sbjct: 332 PVEDGSVMLVDDYGHHPTEVAAVIRAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVQVLA 391
Query: 486 EADQVVVSAV 495
+A+ +++ V
Sbjct: 392 DANVLLLMEV 401
>gi|254428710|ref|ZP_05042417.1| UDP-N-acetylmuramate--alanine ligase [Alcanivorax sp. DG881]
gi|196194879|gb|EDX89838.1| UDP-N-acetylmuramate--alanine ligase [Alcanivorax sp. DG881]
Length = 474
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 144/416 (34%), Positives = 212/416 (50%), Gaps = 45/416 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ QG+ +SGSD+ S +E L G + IGH SNI G D
Sbjct: 19 IHFVGIGGVGMCGIAEVLANQGYAISGSDIKESPVVERLRSLGVRVDIGHRASNIDGAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV S+A+ +N+E+ A +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 78 -----VVVTSTAVNTENLEVAAAHERRIPVVPRAQMLAELMRFRHGIAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+ A ++ G D T ++G + + G + V EADE D FL L P A+VTN
Sbjct: 133 LTAAIMAEAGLDPTFVIGGRLNSAGTNARL-GQSRYLVAEADESDASFLHLQPMSAIVTN 191
Query: 258 LDWEHVDIFEDEDA-VKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ + + A +++ F FL + G V+C D R LL ++ +
Sbjct: 192 IDADHMHTYGGDFAQLENTFIEFLHNLPFYGVAVMCVDDPVVRKLLPRVNR--------- 242
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++I YGFS D AE+V + ++ G PL ++SL +
Sbjct: 243 ----------------QVIRYGFSEDADLRAENVRQDGMVTHFRVVRAEGEPL-EVSLNM 285
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----GC 432
PG HNVLN+LA IA + D+ E+I L+ F GV RRFD+ G +
Sbjct: 286 PGRHNVLNALAAIA----VSADEGADDEAII---RGLNNFTGVGRRFDVQGEYHFEGGSA 338
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
+ DD+ HHP EV A + A R+ +P + L +FQPH Y+R L +DF LS D
Sbjct: 339 TLVDDYGHHPREVAATIDAIREGWPERRLAMLFQPHRYTRTQDLYEDFVEVLSGVD 394
>gi|315633818|ref|ZP_07889107.1| UDP-N-acetylmuramate--L-alanine ligase [Aggregatibacter segnis ATCC
33393]
gi|315477068|gb|EFU67811.1| UDP-N-acetylmuramate--L-alanine ligase [Aggregatibacter segnis ATCC
33393]
Length = 476
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 147/438 (33%), Positives = 221/438 (50%), Gaps = 61/438 (13%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+ R IHF+GIGG+G+ +A++ L +G+ +SGSD+ S+ + L AGA + IGH
Sbjct: 11 IIPEMRRVKQIHFIGIGGAGMCGIAEILLNEGYHISGSDIAESAVTQRLAYAGAKVFIGH 70
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
NI G + VV SSAI DN E++ AK +P+ +R LA+L + IAV+
Sbjct: 71 KAENITG------ASVVVISSAIRDDNPEVVAAKEARIPVIQRAQMLAELMRFRHGIAVA 124
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEAD 239
G+HGK+TT +M++ + G D P F +G + G N + EAD
Sbjct: 125 GTHGKTTTTAMVSMIYAEAGLD---------PTFVNGGLVKSAGTNAHLGRSRYLIAEAD 175
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCA 298
E D FL L P +++VTN++ +H+D + D D +K + FL + G V+C D
Sbjct: 176 ESDASFLHLQPMISIVTNIEPDHMDTYHGDFDEMKQTYVNFLHNLPFYGLAVLCADDADL 235
Query: 299 RSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS 358
SL+ Q+ + ++ITYGFS D+ E G
Sbjct: 236 MSLVPQVGR-------------------------QVITYGFSENADYRIEDYQQTGFQGH 270
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
++C G + + L +PG HN LN+ A +A K + ++ A L L+ F G
Sbjct: 271 YTVICPSGERI-DVLLNVPGRHNALNATAALAVA------KEEGIKNEAILA-ALADFQG 322
Query: 419 VSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
RRFD +G + + DD+ HHPTEV +QAARQ + NK ++ +FQPH YSR
Sbjct: 323 AGRRFDQLGQFIRPNGKVMLVDDYGHHPTEVGVTIQAARQGWENKRIVMIFQPHRYSRTR 382
Query: 475 VLKDDFANALSEADQVVV 492
L DDF LS+ D +++
Sbjct: 383 DLFDDFVQVLSQVDALIM 400
>gi|295089862|emb|CBK75969.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium cf.
saccharolyticum K10]
Length = 465
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 222/429 (51%), Gaps = 37/429 (8%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DF N+ I+F+GIGG +S LA++ + +GF V+GSD S E L GA ++IG
Sbjct: 4 IDF-NKPQHIYFMGIGGISMSGLAEILMDEGFTVTGSDSKESELTEHLRSRGAVIYIGQR 62
Query: 129 VSNI-QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAV 186
NI Q + +AVV ++AI DN E A+ G+P+ R L ++ Y IAV
Sbjct: 63 AENIRQAEQTGKKIDAVVYTAAIHPDNPEFAAAREAGLPMLSRAVLLGEMMRNYREAIAV 122
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
SG+HGK+TT SML+ + A D T VG +P G+I GG + F+ EA EY FL
Sbjct: 123 SGTHGKTTTTSMLSEIFLAAEADPTISVGGILPSI-GGNIRVGGPEFFITEACEYTNSFL 181
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 306
P++ V+ N++ +H+D F+D ++S F RF K+ G +VI G+ + + + +K
Sbjct: 182 EFFPTIEVILNIEEDHMDFFKDLADIRSSFTRFAKKTPKQGAVVINGEIEDWQEI---VK 238
Query: 307 QDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERG 366
G ++IT+G D+ A + + + RG
Sbjct: 239 NTEG----------------------RVITFGTDRGFDYSAGEISYDSLARPTFDFYIRG 276
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
+SL + G HNV N+LA A L + S+ +K L F G RRF+
Sbjct: 277 EKQDTLSLGVSGEHNVYNALAAAAAALE-------AGLSLEAVKRGLLSFTGTKRRFEKK 329
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G + G I DD+AHHP E+RA L+ A Q +P+ + VFQPHTY+R D+FA ALS
Sbjct: 330 GVLNGVTIIDDYAHHPQEIRASLKTA-QNYPHNRIWCVFQPHTYTRTKAFLDEFAEALSM 388
Query: 487 ADQVVVSAV 495
AD +V++ +
Sbjct: 389 ADCIVLADI 397
>gi|256827367|ref|YP_003151326.1| UDP-N-acetylmuramate--alanine ligase [Cryptobacterium curtum DSM
15641]
gi|256583510|gb|ACU94644.1| UDP-N-acetylmuramate--alanine ligase [Cryptobacterium curtum DSM
15641]
Length = 471
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 149/415 (35%), Positives = 219/415 (52%), Gaps = 41/415 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+G+GG G+S +A++A QG VSGSDL S Y + L E G + IG + NI N
Sbjct: 8 VHFIGVGGVGMSGIARVAHDQGMVVSGSDLRESRYTQQLREVGVEIFIGQAAENIPDNPA 67
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
P+ VV S+AI +N E++ AK+ +PI+ R LA+L IA++G+HGK+TT+S
Sbjct: 68 ---PDVVVTSTAILDNNPELIAAKARNLPIWHRARMLAQLGVGKKTIAIAGTHGKTTTSS 124
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A L +G D T ++G V + + G G +V+EADE D F L P +VTN
Sbjct: 125 MVASALDGIGADPTFLIGGIVRAYHTNA-HSGEGAYYVVEADESDKSFTYLDPYAVLVTN 183
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
++ +H+D + D + + + F F+ Q+ G LV+C D + SL +
Sbjct: 184 VEADHLDHYNDLEEIHAKFTEFMSQVPDDGLLVVCADDEVLVSLAASTGK---------- 233
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
+++TYG + D + ES P G + + G + Q P
Sbjct: 234 ---------------RMVTYGSAEGADAHIESWAPAGVGSTFTLKLPDGTLVEGSVKQNP 278
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD 437
G HNVLN+ + T+L IG+ Q + LS F GV RRFDL+G G I DD
Sbjct: 279 GRHNVLNAAGTL-TLLWGIGEDAQD------VARSLSNFAGVRRRFDLVGEADGVTIVDD 331
Query: 438 FAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRL----VVLKDDFANALSEAD 488
+AHHPTE+ A AA ++ K + +FQPH YSR+ VL+ +FA+A EAD
Sbjct: 332 YAHHPTEI-AATIAAAKKLDFKRVHVLFQPHRYSRVGLFTDVLRSEFAHAFDEAD 385
>gi|328952329|ref|YP_004369663.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfobacca acetoxidans
DSM 11109]
gi|328452653|gb|AEB08482.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfobacca acetoxidans
DSM 11109]
Length = 477
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 149/417 (35%), Positives = 217/417 (52%), Gaps = 40/417 (9%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
HF+GIGG G+S LA+L +++G+ VSGSDL ++ E L G GH+ N+ ++
Sbjct: 9 HFIGIGGIGMSGLAELLVRRGYAVSGSDLTANALTEKLQRLGVTFFQGHAPENLLESE-- 66
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
VV SSAI DN E+ A++ G+ I R LA L IA++G+HGK+TT SM
Sbjct: 67 ----VVVISSAIGLDNPELKAAQARGLQILSRAQMLAMLMAGKTQIAIAGAHGKTTTTSM 122
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
A VL+ G + ++G V G+ G G FV EADE DG FL +P VAVVTN+
Sbjct: 123 TASVLRQGGLAPSVVIGGIVDSL-GGNAVLGPGDYFVAEADESDGSFLVFNPHVAVVTNV 181
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVV 318
D EH+D + D ++ +F +F+ Q++ GG +V C D R LL +
Sbjct: 182 DREHLDHYRDLAHIQEVFAKFIHQVQPGGAVVACYDDPNLRPLLYGV------------- 228
Query: 319 SNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPG 378
QG ++ITYG S ++ A + GGS Y L + + L QI++ + G
Sbjct: 229 ---------QG---RLITYGLKSGGNYRAAHI-QVTGGGSSYTLLRQEKKLGQITIPLAG 275
Query: 379 VHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDF 438
H V NSLA A L D R ++ L++ + RRF++ G G + DD+
Sbjct: 276 WHYVANSLAAAAVGFALGLDFRD-------IQAGLAQTGRIKRRFEIKGENQGVTVIDDY 328
Query: 439 AHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
HHPTE+RA L A Q F + L+ FQPH +SR L DF + +A + ++ +
Sbjct: 329 GHHPTEIRATLDAMAQAFAGRRLVVAFQPHRFSRTQALLPDFFDIFQQAQLLFLTDI 385
>gi|445438600|ref|ZP_21441423.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC021]
gi|444752931|gb|ELW77601.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC021]
Length = 482
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 151/429 (35%), Positives = 220/429 (51%), Gaps = 49/429 (11%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG+G+ +A++ QG+++SGSD+ S + L E G ++IGH NI+
Sbjct: 21 RIKHIHFVGIGGAGMCGIAEVLANQGYKISGSDIKASKTTQQLEEIGIKVYIGHEAENIK 80
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
N +V S+AI +N EI A PI +R L +L + IAV+G+HGK+
Sbjct: 81 N------ANVLVVSTAIDPENPEIKAAIEQRTPIVRRAEMLGELMRYRHGIAVAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S+L +L D T ++G + + G + V EADE D FL L P A
Sbjct: 135 TTTSLLTTMLAEENLDPTYVIGGLLNSTGVNAAL-GESRFIVAEADESDASFLYLQPMAA 193
Query: 254 VVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
+VTN+D +H+D +E D +K F +FL + G V+CGD R +L ++ +
Sbjct: 194 IVTNIDADHMDTYEGSFDKLKDTFVQFLHNLPFYGLAVVCGDDANVREILPRVGR----- 248
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLA 370
+ITYGF+ ND A V Q G S + + +GR
Sbjct: 249 --------------------PVITYGFNEDNDIRAIDVE---QDGMRSHFTVLRKGREPL 285
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
++++ PG+HNVLN+LA I D+ S E+I+ L F GV RRF + G
Sbjct: 286 RLTINQPGLHNVLNALAAIGVAT----DEGVSDEAIS---RALKGFSGVGRRFQVQGEFE 338
Query: 431 ----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
+ DD+ HHP EV A ++AARQ P++ L+ +FQPH YSR DDF LS+
Sbjct: 339 LGEGNVKLVDDYGHHPKEVEATIKAARQSHPDRRLVMLFQPHRYSRTRDCFDDFIEVLSQ 398
Query: 487 ADQVVVSAV 495
DQ+++ V
Sbjct: 399 VDQLLLLEV 407
>gi|169794349|ref|YP_001712142.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
AYE]
gi|184159850|ref|YP_001848189.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
ACICU]
gi|213159076|ref|YP_002321074.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
AB0057]
gi|215481905|ref|YP_002324087.1| UDP-N-acetylmuramate--alanine ligase [Acinetobacter baumannii
AB307-0294]
gi|239503825|ref|ZP_04663135.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
AB900]
gi|301344638|ref|ZP_07225379.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
AB056]
gi|301513416|ref|ZP_07238653.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
AB058]
gi|301596387|ref|ZP_07241395.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
AB059]
gi|332850155|ref|ZP_08432542.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
6013150]
gi|332868969|ref|ZP_08438528.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
6013113]
gi|384133544|ref|YP_005516156.1| murC [Acinetobacter baumannii 1656-2]
gi|385239276|ref|YP_005800615.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
TCDC-AB0715]
gi|403674316|ref|ZP_10936579.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter sp. NCTC
10304]
gi|416147578|ref|ZP_11601886.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
AB210]
gi|417550507|ref|ZP_12201586.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
Naval-18]
gi|417553476|ref|ZP_12204545.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
Naval-81]
gi|417559859|ref|ZP_12210738.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC137]
gi|417564394|ref|ZP_12215268.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC143]
gi|417574805|ref|ZP_12225658.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
Canada BC-5]
gi|417880366|ref|ZP_12524895.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
ABNIH3]
gi|421199381|ref|ZP_15656542.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC109]
gi|421455414|ref|ZP_15904758.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
IS-123]
gi|421620897|ref|ZP_16061825.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC074]
gi|421624214|ref|ZP_16065087.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC098]
gi|421635109|ref|ZP_16075712.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
Naval-13]
gi|421641989|ref|ZP_16082520.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
IS-235]
gi|421647958|ref|ZP_16088369.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
IS-251]
gi|421650435|ref|ZP_16090812.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC0162]
gi|421654535|ref|ZP_16094862.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
Naval-72]
gi|421661053|ref|ZP_16101234.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
Naval-83]
gi|421663061|ref|ZP_16103215.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC110]
gi|421673757|ref|ZP_16113694.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC065]
gi|421679909|ref|ZP_16119772.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC111]
gi|421690419|ref|ZP_16130090.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
IS-116]
gi|421693566|ref|ZP_16133199.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
WC-692]
gi|421698512|ref|ZP_16138054.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
IS-58]
gi|421790452|ref|ZP_16226664.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
Naval-82]
gi|421795132|ref|ZP_16231217.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
Naval-21]
gi|421799316|ref|ZP_16235309.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
Canada BC1]
gi|421803724|ref|ZP_16239636.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
WC-A-694]
gi|424058296|ref|ZP_17795793.1| UDP-N-acetylmuramate-L-alanine ligase [Acinetobacter baumannii
Ab33333]
gi|425748158|ref|ZP_18866146.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
WC-348]
gi|445410700|ref|ZP_21433016.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
Naval-57]
gi|445450880|ref|ZP_21444574.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
WC-A-92]
gi|445461511|ref|ZP_21448770.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC047]
gi|445470643|ref|ZP_21451575.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC338]
gi|445489911|ref|ZP_21458919.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
AA-014]
gi|189029225|sp|A3M9Y0.2|MURC_ACIBT RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|226711854|sp|B7GV74.1|MURC_ACIB3 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|226711855|sp|B7ICE4.1|MURC_ACIB5 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|229470258|sp|B2I1J4.1|MURC_ACIBC RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|229470266|sp|B0V9F6.1|MURC_ACIBY RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|169147276|emb|CAM85135.1| UDP-N-acetylmuramate--alanine ligase [Acinetobacter baumannii AYE]
gi|183211444|gb|ACC58842.1| UDP-N-acetylmuramate-alanine ligase [Acinetobacter baumannii ACICU]
gi|193078672|gb|ABO13724.2| UDP-N-acetylmuramate--alanine ligase [Acinetobacter baumannii ATCC
17978]
gi|213058236|gb|ACJ43138.1| UDP-N-acetylmuramate--alanine ligase [Acinetobacter baumannii
AB0057]
gi|213988079|gb|ACJ58378.1| UDP-N-acetylmuramate--alanine ligase [Acinetobacter baumannii
AB307-0294]
gi|322509764|gb|ADX05218.1| murC [Acinetobacter baumannii 1656-2]
gi|323519777|gb|ADX94158.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
TCDC-AB0715]
gi|332731004|gb|EGJ62310.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
6013150]
gi|332733012|gb|EGJ64214.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
6013113]
gi|333365486|gb|EGK47500.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
AB210]
gi|342225201|gb|EGT90204.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
ABNIH3]
gi|395522441|gb|EJG10530.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC137]
gi|395556150|gb|EJG22151.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC143]
gi|395564378|gb|EJG26029.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC109]
gi|400205538|gb|EJO36518.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
Canada BC-5]
gi|400211652|gb|EJO42614.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
IS-123]
gi|400386332|gb|EJP49406.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
Naval-18]
gi|400389893|gb|EJP56940.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
Naval-81]
gi|404564691|gb|EKA69870.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
IS-116]
gi|404570203|gb|EKA75280.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
WC-692]
gi|404572812|gb|EKA77854.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
IS-58]
gi|404665538|gb|EKB33500.1| UDP-N-acetylmuramate-L-alanine ligase [Acinetobacter baumannii
Ab33333]
gi|408510306|gb|EKK11968.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
Naval-72]
gi|408510953|gb|EKK12612.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC0162]
gi|408514741|gb|EKK16347.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
IS-235]
gi|408516152|gb|EKK17731.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
IS-251]
gi|408699757|gb|EKL45232.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC074]
gi|408701782|gb|EKL47204.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC098]
gi|408702661|gb|EKL48069.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
Naval-13]
gi|408703357|gb|EKL48755.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
Naval-83]
gi|408714089|gb|EKL59244.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC110]
gi|410385975|gb|EKP38459.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC065]
gi|410390257|gb|EKP42650.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC111]
gi|410394032|gb|EKP46372.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
Naval-82]
gi|410402213|gb|EKP54337.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
Naval-21]
gi|410409871|gb|EKP61793.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
Canada BC1]
gi|410412190|gb|EKP64049.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
WC-A-694]
gi|425491704|gb|EKU57984.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
WC-348]
gi|444755629|gb|ELW80205.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
WC-A-92]
gi|444766353|gb|ELW90628.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
AA-014]
gi|444771235|gb|ELW95366.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC047]
gi|444772597|gb|ELW96712.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
OIFC338]
gi|444779873|gb|ELX03846.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
Naval-57]
Length = 482
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 150/429 (34%), Positives = 221/429 (51%), Gaps = 49/429 (11%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG+G+ +A++ QG+++SGSD+ S + L E G ++IGH NI+
Sbjct: 21 RIKHIHFVGIGGAGMCGIAEVLANQGYKISGSDIKASKTTQQLEENGIKVYIGHEAENIK 80
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
N +V S+AI +N E+ A +PI +R L +L + IAV+G+HGK+
Sbjct: 81 N------ANVLVVSTAIDPENPEVKAAIEQRIPIVRRAEMLGELMRYRHGIAVAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S+L +L D T ++G + + G + V EADE D FL L P A
Sbjct: 135 TTTSLLTTMLAEENLDPTYVIGGLLNSTGVNAAL-GESRFIVAEADESDASFLYLQPMAA 193
Query: 254 VVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
+VTN+D +H+D +E D +K F +FL + G V+CGD R +L ++ +
Sbjct: 194 IVTNIDADHMDTYEGSFDKLKDTFVQFLHNLPFYGLAVVCGDDANIREILPRVGR----- 248
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLA 370
+ITYGF+ ND A V Q G S + + +GR
Sbjct: 249 --------------------PVITYGFNEDNDIRAIDVE---QDGMRSHFTVLRKGREPL 285
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
++++ PG+HNVLN+LA I D+ S E+I+ L F GV RRF + G
Sbjct: 286 RLTINQPGLHNVLNALAAIGVAT----DEGVSDEAIS---RALKGFSGVGRRFQVQGEFE 338
Query: 431 ----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
+ DD+ HHP EV A ++AARQ P++ L+ +FQPH YSR DDF LS+
Sbjct: 339 LGEGNVKLVDDYGHHPKEVEATIKAARQSHPDRRLVMLFQPHRYSRTRDCFDDFIEVLSQ 398
Query: 487 ADQVVVSAV 495
DQ+++ V
Sbjct: 399 VDQLLLLEV 407
>gi|378952678|ref|YP_005210166.1| protein MurC [Pseudomonas fluorescens F113]
gi|359762692|gb|AEV64771.1| MurC [Pseudomonas fluorescens F113]
Length = 486
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 153/428 (35%), Positives = 215/428 (50%), Gaps = 47/428 (10%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG G+ +A++ L G++VSGSDL S E L GA + IGH N
Sbjct: 15 RIRRIHFVGIGGVGMCGIAEVLLNLGYQVSGSDLKASPVTERLESFGAQIFIGHRAENAA 74
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
D +V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+
Sbjct: 75 NAD------VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKT 128
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S++A V A G D T ++G + + G + + EADE D FL L P VA
Sbjct: 129 TTTSLIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVA 187
Query: 254 VVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
VVTN+D +H+ ++ D + +K F FL + G V+C D R +L IK+ T
Sbjct: 188 VVTNIDADHMATYDGDFNKLKKTFVEFLHNLPFYGLAVVCLDDPVVREILPLIKRPT--- 244
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER-GRPLAQ 371
+TYGF D A +V QG + R R
Sbjct: 245 ----------------------VTYGFGEDADVRAINV--RQQGMQTFFTVLRPDREPLD 280
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY- 430
+S+ +PG HNVLN+LA I + D+ S E+I LS F GV RRF + G +
Sbjct: 281 VSVNMPGNHNVLNALATIC----IATDEGVSDEAIVQ---GLSGFQGVGRRFQVYGELPV 333
Query: 431 ---GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ DD+ HHPTEV AV++A R +P + L+ V+QPH YSR L DDF L++A
Sbjct: 334 DGGNVMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVQVLADA 393
Query: 488 DQVVVSAV 495
+ +++ V
Sbjct: 394 NVLLLMEV 401
>gi|146281469|ref|YP_001171622.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas stutzeri A1501]
gi|339493063|ref|YP_004713356.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas stutzeri ATCC
17588 = LMG 11199]
gi|386019672|ref|YP_005937696.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas stutzeri DSM
4166]
gi|189029022|sp|A4VIH9.1|MURC_PSEU5 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|145569674|gb|ABP78780.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas stutzeri A1501]
gi|327479644|gb|AEA82954.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas stutzeri DSM
4166]
gi|338800435|gb|AEJ04267.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas stutzeri ATCC
17588 = LMG 11199]
Length = 485
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 154/424 (36%), Positives = 216/424 (50%), Gaps = 49/424 (11%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
HFVGIGG G+ +A++ L G+EVSGSDL S+ E L GA + IGH N+ G D
Sbjct: 22 HFVGIGGVGMCGIAEVLLNLGYEVSGSDLKESASTERLQSFGAQIFIGHQAGNVAGAD-- 79
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
+V SSAI N E+ A +P+ R LA+L + IAV+G+HGK+TT S+
Sbjct: 80 ----VLVVSSAINSANPEVALALEQRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTSL 135
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
LA V A G D T ++G + + G + + EADE D FL L P VAVVTN+
Sbjct: 136 LASVFAAGGLDPTFVIGGRLTAAGTNAQL-GSSRYLIAEADESDASFLHLQPMVAVVTNI 194
Query: 259 DWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
D +H+ + D +K F FL + G V+C D R ++ QI + T
Sbjct: 195 DADHMSTYGGDFGKLKKTFVEFLHNLPFYGLAVLCVDDPVVREIIPQIGRPT-------- 246
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDY--ILCERGRPLAQISLQ 375
TYGFS D A +V +G Y +L + PL +S+
Sbjct: 247 -----------------TTYGFSEDADVRAINV--RQEGMRTYFTVLRDGCEPL-DVSVH 286
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----G 431
+PG HNVLN+LA IA + D+ E+I L++F GV RRF + G +
Sbjct: 287 MPGNHNVLNALATIA----IATDEGIDDEAIV---QGLAEFAGVGRRFQVYGNLPVDGGS 339
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+ HHP EV AV++A R +P + L+ V+QPH YSR L DDF L E++ ++
Sbjct: 340 VMLVDDYGHHPREVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVQVLGESNVLL 399
Query: 492 VSAV 495
+ V
Sbjct: 400 LMEV 403
>gi|419801771|ref|ZP_14326985.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus parainfluenzae
HK262]
gi|419845853|ref|ZP_14369116.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus parainfluenzae
HK2019]
gi|385193150|gb|EIF40531.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus parainfluenzae
HK262]
gi|386414891|gb|EIJ29433.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus parainfluenzae
HK2019]
Length = 475
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 147/465 (31%), Positives = 235/465 (50%), Gaps = 68/465 (14%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+ R IHF+GIGG+G+S +A++ L +G+++SGSD+ + L +AGA + IGH
Sbjct: 11 IIPEMRRVQQIHFIGIGGAGMSGIAEILLNEGYDISGSDIADGVVTQRLAQAGAKIFIGH 70
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
N+QG + VV SSAI +DN E++ AK +P+ +R LA++ + IAV+
Sbjct: 71 QAENVQG------ASVVVVSSAIHEDNPELIAAKQNRIPVIQRAQMLAEIMRFRHGIAVA 124
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEAD 239
G+HGK+TT +M++ + D P F +G + GKN + EAD
Sbjct: 125 GTHGKTTTTAMISMIYTQAKLD---------PTFVNGGLVKSAGKNAHLGASRYLIAEAD 175
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCA 298
E D FL L P V+VVTN++ +H+D +E D + +K+ + +FL + G V+C D
Sbjct: 176 ESDASFLHLQPMVSVVTNIEPDHMDTYEGDFEKMKATYVKFLHNLPFYGLAVMCADDAVL 235
Query: 299 RSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS 358
L+ Q+ + +++TYGFS D+ E G
Sbjct: 236 MELVPQVGR-------------------------QVLTYGFSEHADYRIEDYEQTGFQGH 270
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
++C G + + L +PG HN LN+ A +A K + + A L+ L+ F G
Sbjct: 271 YTVVCPNGERI-NVLLNVPGKHNALNATAALAVA------KEEGIGNEAILE-ALADFQG 322
Query: 419 VSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
RRFD +G + DD+ HHPTEV ++AAR+ + +K ++ +FQPH YSR
Sbjct: 323 AGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVGVTIKAAREGWGDKRVVMIFQPHRYSRTR 382
Query: 475 VLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
L DDF LS+ D +++ L ++A ++ A + +C
Sbjct: 383 DLFDDFVQVLSQVDALIM-------LDVYAAGETPIVGADSKALC 420
>gi|359783082|ref|ZP_09286299.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas psychrotolerans
L19]
gi|359368970|gb|EHK69544.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas psychrotolerans
L19]
Length = 471
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 149/423 (35%), Positives = 219/423 (51%), Gaps = 45/423 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G+EVSGSDL S+ L + GA ++IGH N+ D
Sbjct: 7 IHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKESAVTARLQQFGARIYIGHRAENLDQVD- 65
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSAI + N E+ A +P+ R L++L + IAV+G+HGK+TT S
Sbjct: 66 -----VLVVSSAINRSNPEVSAALEQRIPVVPRAEMLSELMRYRHGIAVAGTHGKTTTTS 120
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 121 LIASVFAAEGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPMVAVVTN 179
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ +E D + +K F FL + G V+C D R ++ Q+ + T
Sbjct: 180 IDADHMSTYEGDFNRLKRTFVDFLHNLPFYGLAVLCVDDPVVREIIPQVARPT------- 232
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+TYG + D A + +L E PLA +S+ +
Sbjct: 233 ------------------VTYGTAEDADVRAVDIRQEGMRTHFTVLREGRAPLA-VSVNM 273
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----GC 432
PGVHNVLN+LA IA + D+ S E+I LS F GV RRF + G +
Sbjct: 274 PGVHNVLNALATIA----IATDEGVSDEAILN---GLSGFQGVGRRFQVYGELPVAGGSV 326
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+ DD+ HHP EV AV++A R +P + L+ V+QPH +SR L +DF L++A+ +++
Sbjct: 327 MLVDDYGHHPREVAAVIKAVRGGWPERRLVMVYQPHRFSRTRDLYEDFVQVLADANVLLL 386
Query: 493 SAV 495
V
Sbjct: 387 MEV 389
>gi|374705579|ref|ZP_09712449.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas sp. S9]
Length = 481
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 153/425 (36%), Positives = 218/425 (51%), Gaps = 49/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+ +A++ L G++VSGSDL S+ E L GA + IGH N + D
Sbjct: 19 IHFVGIGGAGMCGIAEVLLNLGYQVSGSDLKDSAVTERLKSFGAQIFIGHRAENAESAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSAI N E+ A +P+ R LA+L + +AV+G+HGK+TT S
Sbjct: 78 -----VLVVSSAINTSNPEVAVALERRIPVVPRAEMLAELMRYRHGVAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+LA V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LLASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPMVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ +E D + +K F FL+ + G V+C R +L Q+ + T
Sbjct: 192 IDMDHMSTYEGDFNRLKKTFIEFLQNLPFYGLAVMCVHDPVVREILPQVARPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDY--ILCERGRPLAQISL 374
+TYGF D A +V QG + +L PL +S+
Sbjct: 245 ------------------MTYGFDEGADVRAINV--RQQGMQTFFTVLRRDSEPL-DVSV 283
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG--TIYGC 432
+PG HNVLN+LA IA + D+ S E+I LS F GV RRF + G + G
Sbjct: 284 NMPGNHNVLNALATIA----IATDEGISDEAIVQ---GLSGFQGVGRRFQVYGELPVEGG 336
Query: 433 HIY--DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP EV AV++A R +P + L+ V+QPH +SR L DDF L E + +
Sbjct: 337 EVMLVDDYGHHPREVAAVIKAVRGGWPERRLVMVYQPHRFSRTRDLYDDFVQVLGETNVL 396
Query: 491 VVSAV 495
++ V
Sbjct: 397 LLMEV 401
>gi|295394740|ref|ZP_06804955.1| UDP-N-acetylmuramate--L-alanine ligase [Brevibacterium mcbrellneri
ATCC 49030]
gi|294972336|gb|EFG48196.1| UDP-N-acetylmuramate--L-alanine ligase [Brevibacterium mcbrellneri
ATCC 49030]
Length = 452
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 220/416 (52%), Gaps = 41/416 (9%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
HF+GIGG+G+S +A++ L +G+ V+GSD SS +E L GA++ IGH S+++G D
Sbjct: 5 HFIGIGGAGMSGIARIMLSRGYTVTGSDAKESSVVEALRAHGAHVFIGHDGSHVEGAD-- 62
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
VV SSAI N EI+ A+ +G+P+ R LA L E IA++G+HGK+TT SM
Sbjct: 63 ----TVVVSSAIRHTNPEIVRAEELGIPVIHRSDALATLMEGKRTIAIAGTHGKTTTTSM 118
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
L+A G D + +G + + + G G F+ EADE DG FL P V V+TN
Sbjct: 119 TTVALQAAGKDPSFAIGGQLSKTGTNA-HAGSGDVFIAEADESDGSFLKYRPEVGVITNA 177
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQI-RVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+ +H+D + + V+ F F + +GG L++C D + A S+ + ++
Sbjct: 178 EADHLDHYGSWERVREAFVEFGSHVGNMGGTLIVCADDKGAASIGREARE---------- 227
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
QG + +I YG S D + + QG S I E G+ A + +P
Sbjct: 228 ----------QGTN--VILYGESDIADARVNA-STHGQGVSVSIAFE-GQEYA-FDIALP 272
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD 437
G +N LN+ A + + GD + + L F G RRF+L G G +YDD
Sbjct: 273 GTYNALNATAAFLSARAVGGDPQ-------GIIQGLESFTGTRRRFELRGIEKGVRVYDD 325
Query: 438 FAHHPTEVRAVLQAARQRF-PNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+AHHPTEV A+L AA++ P+ + +FQPH ++R +FA ALS AD V+V
Sbjct: 326 YAHHPTEVTALLTAAKKVVDPSNKVHVIFQPHLFTRTKNFYREFARALSLADDVIV 381
>gi|345429826|ref|YP_004822944.1| UDP-N-acetylmuramate:L-alanine ligase [Haemophilus parainfluenzae
T3T1]
gi|301155887|emb|CBW15356.1| UDP-N-acetylmuramate:L-alanine ligase [Haemophilus parainfluenzae
T3T1]
Length = 475
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 146/465 (31%), Positives = 236/465 (50%), Gaps = 68/465 (14%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+ R IHF+GIGG+G+S +A++ L +G+++SGSD+ + + L +AGA + IGH
Sbjct: 11 IIPEMRRVQQIHFIGIGGAGMSGIAEILLNEGYDISGSDIADGAVTQRLAQAGAKIFIGH 70
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
N+QG + VV SSAI +DN E++ AK +P+ +R LA++ + IAV+
Sbjct: 71 QAENVQG------ASVVVVSSAIHEDNPELIAAKQNRIPVIQRAQMLAEIMRFRHGIAVA 124
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEAD 239
G+HGK+TT +M++ + D P F +G + GKN + EAD
Sbjct: 125 GTHGKTTTTAMISMIYTQAKLD---------PTFVNGGLVKSAGKNAHLGASRYLIAEAD 175
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCA 298
E D FL L P V+VVTN++ +H+D +E D + +K+ + +FL + G V+C D
Sbjct: 176 ESDASFLHLQPMVSVVTNIEPDHMDTYEGDFEKMKATYVKFLHNLPFYGLAVMCADDAVL 235
Query: 299 RSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS 358
L+ Q+ + +++TYGFS D+ E G
Sbjct: 236 MELVPQVGR-------------------------QVLTYGFSEHADYRIEDYEQTGFQGH 270
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
++C G + + L +PG HN LN+ A +A K + + A L+ L+ F G
Sbjct: 271 YTVVCPSGERI-NVLLNVPGKHNALNATAALAVA------KEEGIGNEAILE-ALADFQG 322
Query: 419 VSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
RRFD +G + DD+ HHPTEV ++AAR+ + +K ++ +FQPH YSR
Sbjct: 323 AGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVDVTIKAAREGWGDKRIVMIFQPHRYSRTR 382
Query: 475 VLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
L D+F LS+ D +++ L ++A ++ A + +C
Sbjct: 383 DLFDEFVQVLSQVDALIM-------LDVYAAGEAPIVGADSKALC 420
>gi|148265984|ref|YP_001232690.1| UDP-N-acetylmuramate--L-alanine ligase [Geobacter uraniireducens
Rf4]
gi|189028991|sp|A5G8J9.1|MURC_GEOUR RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|146399484|gb|ABQ28117.1| UDP-N-acetylmuramate--L-alanine ligase [Geobacter uraniireducens
Rf4]
Length = 458
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 144/418 (34%), Positives = 223/418 (53%), Gaps = 41/418 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+S +A++ L G++VSGSDL + E L G + IGH+ N+ D
Sbjct: 8 IHFVGIGGIGMSGIAEVLLNLGYKVSGSDLRKTEITERLEGLGGEIFIGHARENVANVD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSA+ DN E++ A +P+ R LA+L IA++G+HGK+TT S
Sbjct: 67 -----VVVISSAVHDDNPEVVEAMERLIPVIPRAEMLAELMRMKYGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A +L G D T ++G + + G G+ V EADE DG FL LSP++AVVTN
Sbjct: 122 MVATILAKGGIDPTIVIGGRLNSIGTNARL-GQGQFLVAEADESDGSFLKLSPTIAVVTN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D +H+D ++D D +K F +F+ ++ G V+C D+ ++ +K+
Sbjct: 181 IDADHLDFYKDIDEIKDTFVQFINKVPFYGLAVLCLDNGNIADIIPLVKK---------- 230
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
+ TYG S+ D+ A V + + ++ +G L +I+ +P
Sbjct: 231 ---------------RFNTYGLSTQADFRATDV-RHTGFTTSFVAHYKGTLLGEITFSMP 274
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD 437
G HNVLN+LA IA + L + A ++ F GV RRF + G + + DD
Sbjct: 275 GAHNVLNALATIAVAMEL-------NIPFAEIQAGFKAFGGVGRRFQVKGEVRDIMVVDD 327
Query: 438 FAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
+ HHPTE+RA L AA+ + ++ L+ FQPH YSR L ++F A +AD ++++ +
Sbjct: 328 YGHHPTEIRATLAAAKGGW-DRRLVVAFQPHRYSRTKELFEEFVKAFYDADILILTDI 384
>gi|341614749|ref|ZP_08701618.1| UDP-N-acetylmuramate--L-alanine ligase [Citromicrobium sp. JLT1363]
Length = 481
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 163/432 (37%), Positives = 232/432 (53%), Gaps = 50/432 (11%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G+ V GSD+ S +E L + G +HIGH+ N+ G
Sbjct: 9 GIIHFVGIGGIGMSGIAEVMHNLGYSVQGSDIAESPTVERLKKRGIEIHIGHARENVDGV 68
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
VV SSA+ + N E+ A +P+ +R LA+L + IA++G+HGK+TT
Sbjct: 69 ------AVVVTSSAVKRTNPEVEFALENRIPVVRRAEMLAELMRLKSTIAIAGTHGKTTT 122
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L D T I G + QF + G V+EADE DG FL L ++AVV
Sbjct: 123 TSMIAGLLDCGEIDPTVINGGIIEQFGSNARL-GDSDWMVVEADESDGSFLRLDGTIAVV 181
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH++ + D D VK F F+ + G ++C D ++++ Q++
Sbjct: 182 TNIDPEHLEHYGDFDGVKRAFVEFIHNVPFYGAAILCVDHPEVQAVIGQVR--------- 232
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS-DYILCERG---RPLAQ 371
D ++ITYGFS +D A +V P G D ++ +RG R +
Sbjct: 233 ---------------DRRVITYGFSLQSDICAVNVTPEAGGNRFDVMVRQRGQEDRRIEN 277
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY- 430
+ L +PG HNV N+LA IA L + S E+I + ++F GV RRF +GT+
Sbjct: 278 VFLPMPGRHNVQNALAAIAVSLEM----NCSDETI---REGFARFGGVRRRFTKVGTVAL 330
Query: 431 -GCH--IYDDFAHHPTEVRAVLQAARQRFPNKA----LIAVFQPHTYSRLVVLKDDFANA 483
G H + DD+AHHP E+RAVL AAR+ A +IAV QPH YSRL L DF
Sbjct: 331 DGGHATVIDDYAHHPVEIRAVLAAARESADADAKAGRVIAVMQPHRYSRLGELMADFQGC 390
Query: 484 LSEADQVVVSAV 495
+EADQV V+ V
Sbjct: 391 FNEADQVYVAPV 402
>gi|167586022|ref|ZP_02378410.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia ubonensis Bu]
Length = 465
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 146/425 (34%), Positives = 216/425 (50%), Gaps = 48/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ + G++VSGSDL ++ + L GA + IGH +NI+G
Sbjct: 8 IHFVGIGGAGMSGIAEVLVNLGYQVSGSDLSRNAVTDRLEALGARISIGHDAANIEG--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
NAVV S+A+ DN E+L A++ VPI +R LA+L IA++G+HGK+TT S
Sbjct: 65 ---ANAVVVSTAVRSDNPEVLAARAKRVPIVQRAVMLAELMRLKQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL A D T ++G + + G G V EADE D FL L P + V+TN
Sbjct: 122 LVASVLAAGDLDPTFVIGGRLIS-AGANARLGTGDFIVAEADESDASFLNLYPVIEVITN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D +K F F +++ G V+C D R ++ I +
Sbjct: 181 IDADHMDTYGHDFARLKQAFIEFTQRLPFYGSAVVCVDDPNVRQIIPFISK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++ YG S AE + G + + GR + L +
Sbjct: 232 ----------------PVVRYGLSPDAQVRAEDIDAR-DGRMHFTVIREGREPLPVVLNL 274
Query: 377 PGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC--- 432
PG+HNV N+LA IA L + D ++ L++F GV RRF G +
Sbjct: 275 PGLHNVQNALAAIAIATDLGVSDD--------AIQQALAEFNGVGRRFQRYGEVPAAGGG 326
Query: 433 --HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP E+ A + AAR FP + L+ FQPH Y+R DDF N LS D +
Sbjct: 327 SYTLIDDYGHHPVEMAATIAAARGAFPGRRLVLAFQPHRYTRTRDCFDDFVNVLSTVDAL 386
Query: 491 VVSAV 495
V++ V
Sbjct: 387 VLTEV 391
>gi|330811578|ref|YP_004356040.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|423699134|ref|ZP_17673624.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas fluorescens
Q8r1-96]
gi|327379686|gb|AEA71036.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|387996549|gb|EIK57879.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas fluorescens
Q8r1-96]
Length = 486
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 152/424 (35%), Positives = 214/424 (50%), Gaps = 47/424 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G++VSGSDL S E L GA + IGH N D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYQVSGSDLKASPVTERLESFGAQIFIGHRAENAANAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 78 -----VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ ++ D + +K F FL + G V+C D R +L IK+ T
Sbjct: 192 IDADHMATYDGDFNKLKKTFVEFLHNLPFYGLAVVCLDDPVVREILPLIKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER-GRPLAQISLQ 375
+TYGF D A +V QG + R R +S+
Sbjct: 245 ------------------MTYGFGEEADVRAINV--RQQGMQTFFTVLRPDREPLDVSVN 284
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----G 431
+PG HNVLN+LA I + D+ S E+I LS F GV RRF + G +
Sbjct: 285 MPGNHNVLNALATIC----IATDEGVSDEAIVQ---GLSGFQGVGRRFQVYGELPVDGGN 337
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+ HHPTEV AV++A R +P + L+ V+QPH YSR L DDF L++A+ ++
Sbjct: 338 VMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVQVLADANVLL 397
Query: 492 VSAV 495
+ V
Sbjct: 398 LMEV 401
>gi|342217843|ref|ZP_08710481.1| UDP-N-acetylmuramate--L-alanine ligase [Megasphaera sp. UPII 135-E]
gi|341592830|gb|EGS35690.1| UDP-N-acetylmuramate--L-alanine ligase [Megasphaera sp. UPII 135-E]
Length = 460
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 146/420 (34%), Positives = 220/420 (52%), Gaps = 44/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG+G+ A+A + + +G++VSGSD V S + + GA + IG N+Q +
Sbjct: 10 IHFIGIGGAGMRAIANIFIAKGYDVSGSDSVRSDITDRFAQQGARICIGQRPENLQDAE- 68
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV S+AI QDN E++ A+ +PI R L + IAV+G+HGK+TT+S
Sbjct: 69 -----VVVVSTAIHQDNCELVAAREKQLPIIHRSDALVYIMSWGKSIAVAGAHGKTTTSS 123
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
ML V D T ++G V SI G G+ ++EADE DG FL P +AVVTN
Sbjct: 124 MLGQVFIESKMDPTIVIGGEVDYLHSNSIL-GTGEYSIVEADESDGTFLKEKPYIAVVTN 182
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIR-VGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + + V F+ F++++ V G V+C +++ R+L I
Sbjct: 183 IDADHMDHYGSIEHVVDAFKDFIQRVDPVQGLAVLCFENERIRALAKTI----------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQIS-LQ 375
G Y I+YGFS ++ A + + G Y + L + L+
Sbjct: 232 ------------GRHY--ISYGFSDDVEYQARGL--RYEKGLHYFDVYHKQTLVGTACLR 275
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
IPG HNVLN+LA IA L S ++ LS F G RRF G ++ +
Sbjct: 276 IPGTHNVLNALATIAVAL-------HCGISFTDIRAALSHFRGAKRRFQTKGIVHDIWVV 328
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHPTE+ A L AAR ++ +I +FQPH YSR +L + F +A +AD ++++ +
Sbjct: 329 DDYAHHPTEINATLTAARDMGTHR-VICLFQPHRYSRTKLLLEQFGSAFLQADILIITDI 387
>gi|303246308|ref|ZP_07332588.1| UDP-N-acetylmuramate/alanine ligase [Desulfovibrio fructosovorans
JJ]
gi|302492371|gb|EFL52243.1| UDP-N-acetylmuramate/alanine ligase [Desulfovibrio fructosovorans
JJ]
Length = 470
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 135/404 (33%), Positives = 204/404 (50%), Gaps = 41/404 (10%)
Query: 92 AKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIP 151
A++ + G+EVSGSDL + ++ L GAN+ IGH N+ D VV S+A+
Sbjct: 35 AEVLINLGYEVSGSDLAMGATVKRLAGLGANIAIGHGRENLGDAD------VVVKSTAVT 88
Query: 152 QDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLT 211
+N E++ A+ G+P+ R LA+L N IAV+G+HGK+TT S+LA + G D T
Sbjct: 89 NENPEVVAARERGIPVIPRAEMLAELMRLRNGIAVAGTHGKTTTTSLLATIFTEAGYDPT 148
Query: 212 AIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDA 271
I+G + + G+ G G+ + EADE DG FL LSP +VVTN+D +H+D + D A
Sbjct: 149 VIIGGRLNAYGAGARL-GQGEYLIAEADESDGSFLCLSPIASVVTNVDADHLDHYADLAA 207
Query: 272 VKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHD 331
+ F FL I G V+C D LL ++ +
Sbjct: 208 IDDAFVDFLNGIPFYGVNVVCLDDPGVARLLPRVNR------------------------ 243
Query: 332 YKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIAT 391
I+TYG +S + + S + + G+ L ++ L PG HNVLN+L I
Sbjct: 244 -PILTYGVTSQARLRGKIL--ETGAASRFSVTLDGKDLGEMRLAHPGRHNVLNALGAIGL 300
Query: 392 VLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQA 451
L ++ + + L+KF GV RRF+ G G + DD+ HHP E+RA L
Sbjct: 301 SL-------EAGIELPVIAAALAKFGGVGRRFERKGERNGVVVVDDYGHHPAEIRATLAT 353
Query: 452 ARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
AR +P++ L+ FQPH +SR L DF AD+++++ +
Sbjct: 354 ARTVYPDRRLVVAFQPHRFSRTKALFGDFCTCFEAADELLLTEI 397
>gi|154483291|ref|ZP_02025739.1| hypothetical protein EUBVEN_00992 [Eubacterium ventriosum ATCC
27560]
gi|149735801|gb|EDM51687.1| UDP-N-acetylmuramate--L-alanine ligase [Eubacterium ventriosum ATCC
27560]
Length = 460
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 138/429 (32%), Positives = 217/429 (50%), Gaps = 42/429 (9%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DF N IHF GIGG +S LA++ L +GF V+GSD S + L GA ++ G
Sbjct: 4 LDF-NTPAKIHFTGIGGISMSGLAEIMLSKGFTVTGSDSRESEITKHLESLGATIYYGQK 62
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVS 187
SN+ + ++ ++A+ DN E++ A + +P+ R +L ++ + Y+ I VS
Sbjct: 63 ASNVAAD-----TEVLIYTAAVKADNPELVAATEMNIPLLTRAEFLGQIMKNYHTAIGVS 117
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT SML+ ++ D T +VG +P +G+ G N + EA EY FL
Sbjct: 118 GTHGKTTTTSMLSQIMLEANTDPTILVGGIMPAI-NGNTRIGHSDNMITEACEYTNSFLS 176
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
+P++ ++ N+ +H+D F+D D ++ FRR+ + I GG LVI D +D +
Sbjct: 177 FAPTIGIILNVAADHLDFFKDLDDIRHSFRRYAELIPEGGALVINSD-------IDNL-- 227
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWY-AESVCPNVQGGSDYILCERG 366
D + +G +IT G Y A ++ + Y L G
Sbjct: 228 ----------------DYFTEGLKCNVITVGSDPEKSMYSAANITYDEFARGSYDLVVNG 271
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
I L++ G HN+ NSLA IA + D + L ++ G RRF
Sbjct: 272 ETKTHIVLKVTGEHNIYNSLASIAAAHFMGIDDN-------SIIAGLQQYGGTDRRFQYK 324
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G + + DD+AHHP E+RA ++ A+ +P+K + VFQPHTY+R L +F ALSE
Sbjct: 325 GKLGDITVIDDYAHHPDEIRATIKTAKH-YPHKKMWVVFQPHTYTRTKALLPEFCKALSE 383
Query: 487 ADQVVVSAV 495
AD VV++ +
Sbjct: 384 ADAVVLADI 392
>gi|375131955|ref|YP_004994055.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio furnissii NCTC
11218]
gi|315181129|gb|ADT88043.1| UDP-N-acetylmuramate--alanine ligase [Vibrio furnissii NCTC 11218]
Length = 486
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 140/435 (32%), Positives = 218/435 (50%), Gaps = 61/435 (14%)
Query: 67 CIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG 126
+V R IHF+GIGG+G+S +A++ L +G++++GSD+ ++ E L + GA ++IG
Sbjct: 14 AVVPEMRRVKCIHFIGIGGAGMSGIAEVLLNEGYQITGSDIASNAVTERLTDKGATVYIG 73
Query: 127 HSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAV 186
HS SN+ + VV S+AI ++N EI A+ +P+ +R LA+L + IAV
Sbjct: 74 HSASNVA------QASVVVVSTAINEENPEIKAAREKRIPVVRRAEMLAELMRFRHGIAV 127
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEA 238
+G+HGK+TT +++ + G D P F +G + G N + EA
Sbjct: 128 AGTHGKTTTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGSSRILIAEA 178
Query: 239 DEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQC 297
DE D FL L P +VTN++ +H+D + D + +K F FL + G ++C D
Sbjct: 179 DESDASFLHLQPMATIVTNIEADHMDTYGGDFETLKQTFVDFLHNLPFYGQAILCVDDPV 238
Query: 298 ARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG 357
R L+ +I + +ITYGFS D E+ Q G
Sbjct: 239 VRELIPRISR-------------------------HVITYGFSEDADVRIENYRQEGQQG 273
Query: 358 SDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFM 417
+ + +GR I+L IPG HN LN+ A IA + + H+ + + ++
Sbjct: 274 K-FTVVRQGRANLDITLNIPGRHNALNASAAIA-----VATEDDIHDDV--ILRAMANTQ 325
Query: 418 GVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRL 473
G RRFD +G + + DD+ HHPTEV + AAR + +K L+ +FQPH Y+R
Sbjct: 326 GTGRRFDHLGEFDTGNGDVMLVDDYGHHPTEVGVTIAAARNGWADKRLVMIFQPHRYTRT 385
Query: 474 VVLKDDFANALSEAD 488
L DDFAN L + D
Sbjct: 386 RDLYDDFANVLEQVD 400
>gi|429213008|ref|ZP_19204173.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas sp. M1]
gi|428157490|gb|EKX04038.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas sp. M1]
Length = 480
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 151/422 (35%), Positives = 215/422 (50%), Gaps = 45/422 (10%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
HFVGIGG+G+ +A++ L G+EVSGSDL S+ E L + GA + IGH N G D
Sbjct: 19 HFVGIGGAGMCGIAEVLLNLGYEVSGSDLKASAVTERLEKFGAQVFIGHRAENADGAD-- 76
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
+V SSA+ + N E+ A VP+ R LA+L + IAV+G+HGK+TT S+
Sbjct: 77 ----VLVVSSAVNKANPEVAAALERRVPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTSL 132
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
+A V A G D T ++G + + G + V EADE D FL L P VAVVTN+
Sbjct: 133 IASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLVAEADESDASFLHLQPMVAVVTNI 191
Query: 259 DWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
D +H+ + D + +K F FL + G V+C D R +L Q+ + T
Sbjct: 192 DADHMATYGGDFNKLKKTFVDFLHNLPFYGLAVMCVDDPVVREILPQVARPT-------- 243
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
+TYG S D A ++ +L PL +S+ +P
Sbjct: 244 -----------------VTYGLSEDADVRAINIRQEGMRTWFTVLRPEREPL-DVSVNMP 285
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----GCH 433
G+HNVLNSLA I + D+ S E+I LS F GV RRF + G +
Sbjct: 286 GLHNVLNSLATI----VIATDEGISDEAIVQ---GLSGFQGVGRRFQVYGELQVDGGSVM 338
Query: 434 IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVS 493
+ DD+ HHP EV AV++A R +P + L+ V+QPH Y+R L +DF L EA+ +++
Sbjct: 339 LVDDYGHHPREVAAVIKAVRGGWPERRLVMVYQPHRYTRTRDLYEDFVQVLGEANVLLLM 398
Query: 494 AV 495
V
Sbjct: 399 EV 400
>gi|333907833|ref|YP_004481419.1| UDP-N-acetylmuramate--L-alanine ligase [Marinomonas posidonica
IVIA-Po-181]
gi|333477839|gb|AEF54500.1| UDP-N-acetylmuramate--L-alanine ligase [Marinomonas posidonica
IVIA-Po-181]
Length = 473
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 146/423 (34%), Positives = 213/423 (50%), Gaps = 58/423 (13%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG G+ +A++ QG++VSGSDL SS + L E G ++IGH N+
Sbjct: 19 IHFIGIGGVGMCGIAEVLHNQGYQVSGSDLKASSTTDRLAELGIKIYIGHLEENVHD--- 75
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ +V S+AI ++N EI+ K +PI +R LA+L + IAV+G+HGK+TT S
Sbjct: 76 ---AHVIVVSTAINEENPEIIWGKEHRIPIVRRAEMLAELMRYRHGIAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL A G+ T ++G + + G V EADE D FL L P +VTN
Sbjct: 133 LMASVLAATGETPTFVIGGRLTSAGTNAQL-GSSSYLVAEADESDASFLHLQPQTVIVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D ++ D + VK F F+ + G V+C D R +L + +
Sbjct: 192 IDEDHMDTYQGDFEKVKHTFVEFVHNLPFYGLAVMCVDDANVREILPALSR--------- 242
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE------RGRPLA 370
++TYG D+YA + Q G CE G PL
Sbjct: 243 ----------------PVLTYGIEQEADFYATDIK---QTGR---YCEFMAHRPEGEPL- 279
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRF---DLIG 427
+I L +PG HNVLN+L+ IA L D A ++ L F GV RRF +
Sbjct: 280 KIRLPMPGRHNVLNALSTIAVATDLGVDA-------AAIQAGLMGFEGVGRRFQEQQPLA 332
Query: 428 TIYGCHIY--DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
G + DD+ HHP+EV A ++A R+ +P K L+ V+QPH +SR L +DF LS
Sbjct: 333 LSNGSEVMFVDDYGHHPSEVLATIKAIREGWPEKRLVMVYQPHRFSRTRDLYEDFVRVLS 392
Query: 486 EAD 488
+ D
Sbjct: 393 QVD 395
>gi|392953129|ref|ZP_10318683.1| UDP-N-acetylmuramate--L-alanine ligase [Hydrocarboniphaga effusa
AP103]
gi|391858644|gb|EIT69173.1| UDP-N-acetylmuramate--L-alanine ligase [Hydrocarboniphaga effusa
AP103]
Length = 476
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 145/429 (33%), Positives = 216/429 (50%), Gaps = 46/429 (10%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
R +H +GIGGSG++ +A++ L G+ VSG+DL S+ L GA + GH+ N
Sbjct: 14 RRVRRVHMLGIGGSGMAGIAEVLLNLGYRVSGTDLKESAATRRLASLGAQIFFGHAEQNT 73
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
+G D VV S+A+ N E+ +A + +P+ +R LA+L IA++G+HGK
Sbjct: 74 EGAD------VVVCSTAVKASNPEVAYAHAHRIPVVRRAEMLAELMRFRYGIAIAGTHGK 127
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+TT S++A VL G D T +VG V + D + G G V EADE D FL LSP +
Sbjct: 128 TTTTSLVAAVLAEGGLDPTFVVGGKV-KSADTNARLGAGHYLVAEADESDASFLHLSPLM 186
Query: 253 AVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
A VTN+D +H++ + D + +K F FL ++ G V+C D L+ +I + T
Sbjct: 187 AAVTNIDADHLETYGGDFNTLKDTFIEFLHRLPFYGLAVLCIDDPVIAELITEIGRPT-- 244
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQ 371
+TYG D A ++ V G D+ L R A+
Sbjct: 245 -----------------------LTYGLGEEADVRAVNI-RAVGSGHDFDLVTREGLRAE 280
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY- 430
+ L +PG+HNV N+LA IA L L S+ ++ +F G+ RR + G +
Sbjct: 281 LHLNLPGLHNVQNALAAIAIGLEL-------GVSVEAIRKAFLEFQGIGRRCEPHGLVAL 333
Query: 431 ----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
+ DD+ HHP E+ A QA R P + L+ FQPH Y+R L DDF LSE
Sbjct: 334 PKGGSALVVDDYGHHPREIAATFQAMRAAHPQRRLVVAFQPHRYTRTRDLFDDFCLILSE 393
Query: 487 ADQVVVSAV 495
AD ++++ V
Sbjct: 394 ADGLLLTEV 402
>gi|119026118|ref|YP_909963.1| UDP-N-acetylmuramate--L-alanine ligase [Bifidobacterium
adolescentis ATCC 15703]
gi|166222958|sp|A1A2E8.1|MURC_BIFAA RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|118765702|dbj|BAF39881.1| UDP-N-acetylmuramate--L-alanine ligase [Bifidobacterium
adolescentis ATCC 15703]
Length = 521
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 149/453 (32%), Positives = 236/453 (52%), Gaps = 44/453 (9%)
Query: 57 TNCTFKRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGL 116
T+ +F EE + D G HF+GIGG+G+S LA++ +QG EV GSD S+ + L
Sbjct: 16 THASFA-PEETVHDL----GATHFIGIGGAGMSVLAEMLHEQGVEVDGSDREPSAKTDRL 70
Query: 117 LEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAK 176
G + G N++G N VV SSAI DN EI+ A G I R LA
Sbjct: 71 QSLGITVEFGQQAKNVEGK------NTVVFSSAIKPDNPEIVAAHEAGERIVHRSDILAL 124
Query: 177 LTEKYNLIAVSGSHGKSTTASMLAYVLKAMGD----DLTAIVGAHVPQFPDGSIFYGG-- 230
L + V+G+HGK+TT+SMLA++L G+ D + +G + Q DG+I GG
Sbjct: 125 LMNAKRAVTVAGAHGKTTTSSMLAHILVNAGEGELADPSYAIGGSI-QGKDGAILDGGHA 183
Query: 231 --GKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGH 288
G V EADE DG F P +A++TN + +H+D + +D ++ F + GH
Sbjct: 184 GKGNVLVAEADESDGSFAKYHPQIAIITNSEADHLDHYGTQDNYRAAF------VDHAGH 237
Query: 289 ----LVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIIT-YGFSSFN 343
+++CGD + ++L + D + V S +++ G + ++ S
Sbjct: 238 ATKAVIMCGDDEGNLAVLRAL--DATVAGRTIVYSTRNAAELGDLNGATLVRIESESETA 295
Query: 344 DWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSH 403
+ AE ++ GG ++ E R +A ++L +PG+HN N+ A I L D ++
Sbjct: 296 ESGAEHFTLHIPGG---LIGEEERRIA-VTLTVPGIHNARNASAAIIAAALLGMDVERAS 351
Query: 404 ESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIA 463
++ + F+G +RRF + GT+ + DD+AHHPTE+ A+L AAR+R+P +
Sbjct: 352 AAV-------TSFLGAARRFQVRGTVSQVTVVDDYAHHPTEIAALLDAARRRYPQSKIRV 404
Query: 464 VFQPHTYSRLVVLKDDFANALSEADQVVVSAVL 496
+FQPH +SR +FA AL++AD V+V+ +
Sbjct: 405 IFQPHLFSRTRFFSSEFAQALAKADDVIVTGIF 437
>gi|92116836|ref|YP_576565.1| UDP-N-acetylmuramate--L-alanine ligase [Nitrobacter hamburgensis
X14]
gi|122418259|sp|Q1QNU2.1|MURC_NITHX RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|91799730|gb|ABE62105.1| UDP-N-acetylmuramate--L-alanine ligase [Nitrobacter hamburgensis
X14]
Length = 467
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 152/427 (35%), Positives = 228/427 (53%), Gaps = 48/427 (11%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G+ V GSD + + L + G + +GH N+ G
Sbjct: 8 GPIHFVGIGGIGMSGIAEVLCNLGYTVQGSDASEGANVVRLRDKGIKVTVGHRAENVSGA 67
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D +V S+AI +DN E++ A++ +P+ +R LA+L + +A++G+HGK+TT
Sbjct: 68 D------VLVVSTAIRRDNPELMAARAQRIPVVRRAEMLAELMRLKSCVAIAGTHGKTTT 121
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L A D T I G + + + G G+ V+EADE DG FL L VA+V
Sbjct: 122 TSMVAALLDAGDFDPTVINGGIINAYGTNARL-GAGEWMVVEADESDGTFLKLPTDVAIV 180
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D F+ DAV+ FR F++ + G V+C D +S++ +I+
Sbjct: 181 TNVDPEHLDHFKTFDAVQDAFRSFVENVPFYGFAVMCIDHPVVQSMVGRIE--------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR------PL 369
D +I+TYG + D + PN GGS + + R R +
Sbjct: 232 ---------------DRRIVTYGENPQADARLVDLAPN-GGGSHFKVVFRNRKTDAAHEV 275
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
+ + L +PG HN LN+ A IA L I D A ++ ++ F GV RRF G
Sbjct: 276 SDLVLPMPGRHNALNATAAIAVAHELGIPD--------ATIRKAIAAFGGVKRRFTKTGE 327
Query: 429 IYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
G I DD+ HHP E+ AVL+AAR+ K ++AV QPH Y+RL L ++F ++AD
Sbjct: 328 WNGVTIIDDYGHHPVEIAAVLKAARESTGGK-VVAVVQPHRYTRLQSLFEEFCTCFNDAD 386
Query: 489 QVVVSAV 495
VVV+ V
Sbjct: 387 TVVVAEV 393
>gi|298531034|ref|ZP_07018435.1| UDP-N-acetylmuramate/alanine ligase [Desulfonatronospira
thiodismutans ASO3-1]
gi|298509057|gb|EFI32962.1| UDP-N-acetylmuramate/alanine ligase [Desulfonatronospira
thiodismutans ASO3-1]
Length = 453
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 145/420 (34%), Positives = 218/420 (51%), Gaps = 45/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH VGIGGSG+S +A++ L G++VSGSDL ++ L E GA + GH N+
Sbjct: 8 IHMVGIGGSGMSGIAEVLLNLGYQVSGSDLSRGPTVKILQEQGAKVFQGHHQDNVGP--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV S+A+ +DN EIL A+S G+P+ R LA+L +AV+G+HGK+TT S
Sbjct: 65 ---AQVVVKSTAVREDNPEILQARSAGIPVIPRAEMLAELMRLKTGVAVAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
L + K G D T I+G + ++ ++ G G+ + EADE DG FL L P + +VTN
Sbjct: 122 FLGTIFKEAGLDPTVIIGGRLNKYGSNAL-PGTGEYLIAEADESDGSFLTLLPIINIVTN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+ +H+D + D D ++ F RF+ + G V+CGD R +LD++K+
Sbjct: 181 IGADHLDYYRDLDEIRESFVRFMNNVPFYGLNVVCGDDPEIRQVLDRVKR---------- 230
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAE--SVCPNVQGGSDYILCERGRPLAQISLQ 375
++TYGF + AE S P GS + + ++ L
Sbjct: 231 ---------------PVLTYGFQEQSRLRAEILSTSP----GSQFNVFHDQNFWGRVKLN 271
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
PG HNVLN LA I + DK+ S+A F GV RRF+ G +
Sbjct: 272 HPGRHNVLNCLAAIGVAIQAGIDKQDILRSLA-------DFGGVGRRFERKGIKDDVIVV 324
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+ HHPTE+ A L+ ARQ P++ L+ +FQPH ++R +F L+ AD ++++ +
Sbjct: 325 DDYGHHPTEIAATLETARQCHPDRRLVVLFQPHRFTRTRDFFGEFCRVLAGADLLLLTEI 384
>gi|443672761|ref|ZP_21137841.1| UDP-N-acetylmuramate--L-alanine ligase [Rhodococcus sp. AW25M09]
gi|443414607|emb|CCQ16179.1| UDP-N-acetylmuramate--L-alanine ligase [Rhodococcus sp. AW25M09]
Length = 489
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 150/432 (34%), Positives = 213/432 (49%), Gaps = 52/432 (12%)
Query: 80 FVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSR 139
VGIGG+G+S +A++ L +G +VSGSD S + L GA + IGH S + DG
Sbjct: 1 MVGIGGAGMSGIARILLARGGQVSGSDAKESRGVLALRARGAQVRIGHDASALDMIDGG- 59
Query: 140 FPNAVVAS-SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
P VV + +AIPQ N E++ A+ G+P+ R L+ L + Y + VSG+HGK++T SM
Sbjct: 60 -PTVVVTTHAAIPQTNPELVEARERGIPVVLRPAVLSSLMQGYRTLLVSGTHGKTSTTSM 118
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
L L+ G D + VG + + + +G G FV EADE DG L S +V +VTN+
Sbjct: 119 LVVALQHCGFDPSFAVGGELNEAGTNA-HHGSGDVFVAEADESDGSLLQYSANVIIVTNI 177
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVIC----GDSQCARSLLDQIKQDTGLKYS 314
+ +H+D F +A +F F + GG LV C G + AR ++D+
Sbjct: 178 EADHLDYFGTTEAYVQVFDDFAALLGPGGVLVACMDDPGSAALARRVVDR---------- 227
Query: 315 GGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAE------SVCPNVQGGSDYILCERGRP 368
++ G K++ YG S + E S P GG +
Sbjct: 228 ---------NMPG----VKVLGYGSSDIDAGPVEMAVRLLSWVPEDIGGVAQLQIAGEDA 274
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
+ L +PG H LN+LA RQ I L L+ F GV RRF G
Sbjct: 275 ARTVRLGVPGRHTALNALAAFVA-------ARQVGAGIEELLAGLTGFGGVHRRFQFTGR 327
Query: 429 IYGCHIYDDFAHHPTEVRAVLQAARQRFPNKA--------LIAVFQPHTYSRLVVLKDDF 480
+G ++DD+AHHPTEVRAVL AA+ + ++ VFQPH YSR D+F
Sbjct: 328 EHGVRVFDDYAHHPTEVRAVLTAAQALVAGQGSTGDRQGRVVVVFQPHLYSRTATFADEF 387
Query: 481 ANALSEADQVVV 492
ALS AD++VV
Sbjct: 388 GAALSLADEIVV 399
>gi|283768879|ref|ZP_06341790.1| UDP-N-acetylmuramate--L-alanine ligase [Bulleidia extructa W1219]
gi|283104665|gb|EFC06038.1| UDP-N-acetylmuramate--L-alanine ligase [Bulleidia extructa W1219]
Length = 458
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/419 (32%), Positives = 219/419 (52%), Gaps = 41/419 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
++F+GIGG +S LA + + +GF+V+GSD S+ E L + GA + IG NI
Sbjct: 11 VYFIGIGGVSMSGLAHILMDRGFKVAGSDAHVSANTELLEKEGATILIGQKAENITNK-- 68
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKSTTA 196
VV ++AI DN E A + +P+ R LA++ E Y N IA++G+HGK+TT
Sbjct: 69 ---YKLVVYTAAIHPDNPEYQQAMKLNIPLMNRKDLLAEVMEHYHNSIAIAGTHGKTTTT 125
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
+ML+Y+ A D T +GAH + G++ G + F+ EA EY FL L P +++
Sbjct: 126 AMLSYIFLAAELDPTISIGAHFKKI-HGNVRIGHSEAFLAEACEYTNSFLALRPLASIIL 184
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F+D +++ F +F+ G L+I S +D +++
Sbjct: 185 NIEEDHLDFFKDLQDIRNSFHQFVLNTSSEGALII-------HSQIDHVEEIV------- 230
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+G+ ++I +G + D A+++ GG+ + + R L I L
Sbjct: 231 -----------EGYHGQVIQFGLNK-GDLCAKNIQHLRHGGNQFEVWMRSERLGSIELPT 278
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
G HN+ N+LA I ++ ++ L +F G RRF+ G G I D
Sbjct: 279 GGKHNITNALAAIGVAISF-------GVPFEAIQQGLKEFEGADRRFEKKGFYQGAEIVD 331
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHP E++A L A+ +P++ LI VFQPHTYSR L ++FA LS+ DQVV++ +
Sbjct: 332 DYAHHPQEIQATLNMAKD-YPHQRLIMVFQPHTYSRTKFLFEEFAEVLSQVDQVVLAPI 389
>gi|323497896|ref|ZP_08102905.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio sinaloensis DSM
21326]
gi|323316941|gb|EGA69943.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio sinaloensis DSM
21326]
Length = 486
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 140/441 (31%), Positives = 222/441 (50%), Gaps = 65/441 (14%)
Query: 67 CIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG 126
+V R IHF+GIGG+G+S +A++ L +G+++SGSD+ + E L + GA ++IG
Sbjct: 14 AMVPEMRRVKCIHFIGIGGAGMSGIAEVLLNEGYQISGSDIAENPVTERLTQKGATVYIG 73
Query: 127 HSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAV 186
H+ N + VV S+AI ++N EI+ A++ +P+ +R LA+L + IAV
Sbjct: 74 HAEQN------VAQASVVVVSTAINEENPEIVAARAARIPVVRRAEMLAELMRFRHGIAV 127
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEA 238
+G+HGK+TT +++ + G D P F +G + G N + EA
Sbjct: 128 AGTHGKTTTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGSSRILIAEA 178
Query: 239 DEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQC 297
DE D FL L P V++VTN++ +H+D + D + +K F FL + G ++C D
Sbjct: 179 DESDASFLHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAIVCIDDPV 238
Query: 298 ARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG 357
R L+ +I + ++ITYGF+ D ++ Q G
Sbjct: 239 VRELVPKISR-------------------------QVITYGFAEDADVRIDNYRQEGQQG 273
Query: 358 SDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIA--CLKLPLSK 415
+ + +G+ I+L IPG HN LN+ A IA + + IA + ++
Sbjct: 274 K-FTVIRQGKADLDITLNIPGRHNALNASAAIAVA---------TEDDIADEAILNAMAG 323
Query: 416 FMGVSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYS 471
G RRFD +G + DD+ HHPTEV +QAAR + +K L+ +FQPH YS
Sbjct: 324 TQGTGRRFDHLGEFDTGNGAVMLVDDYGHHPTEVDVTIQAARNGWEDKRLVMIFQPHRYS 383
Query: 472 RLVVLKDDFANALSEADQVVV 492
R L DDFAN L + D +++
Sbjct: 384 RTRDLYDDFANVLEQVDVLIL 404
>gi|220904385|ref|YP_002479697.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|254765997|sp|B8IZU2.1|MURC_DESDA RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|219868684|gb|ACL49019.1| UDP-N-acetylmuramate/alanine ligase [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 457
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/419 (32%), Positives = 211/419 (50%), Gaps = 43/419 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH VGIGG+G+S +A++ L +E+SGSD+ S+ + L GA + +GH+ N+
Sbjct: 8 IHMVGIGGAGMSGIAEVLLNLKYEISGSDMSDSAVVRHLRSLGARIAVGHAAENVGD--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V S+AI DN E++ A+ + I R LA+L IA++G+HGK+TT S
Sbjct: 65 ---VQVLVKSTAISDDNPELVEARKRNIAIIPRAEMLAELMRLRQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+ A + G D T I+G + + + G G+ + EADE DG FL L P + VVTN
Sbjct: 122 LTASIFDEAGLDPTVIIGGRLNVY-GANAHLGHGEYLIAEADESDGSFLCLLPIINVVTN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D +H+D ++ +A+ S F +F+ + G ++CGD LL Q+K+
Sbjct: 181 VDEDHLDHYKTREAINSAFVQFMNNVPFYGLNIVCGDDPGVLELLPQVKR---------- 230
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG-SDYILCERGRPLAQISLQI 376
++TYGF+ N A P G S + + L ++SL
Sbjct: 231 ---------------PVLTYGFAEDNALRA---VPLESGRISRFQVWLHDEKLGEVSLPQ 272
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG HN+LN+LA I + + S E A L F GV RRF+ G G + D
Sbjct: 273 PGRHNILNALASIGAAMEV----GISFEKCAA---GLCGFKGVGRRFEFKGEKQGVTVVD 325
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+ HHP E+ A L ARQ F + ++A FQPH +SR +F + DQ++++ +
Sbjct: 326 DYGHHPAEIAATLATARQVFEGRRIVAAFQPHRFSRTEAHFGEFCKVFNNVDQLLLTEI 384
>gi|418461004|ref|ZP_13032086.1| UDP-N-acetylmuramate--L-alanine ligase [Saccharomonospora azurea
SZMC 14600]
gi|359738959|gb|EHK87837.1| UDP-N-acetylmuramate--L-alanine ligase [Saccharomonospora azurea
SZMC 14600]
Length = 450
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 144/414 (34%), Positives = 216/414 (52%), Gaps = 32/414 (7%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
H +GIGG+G+S +A++ L +G +VSGSD S L GA + +G N+ DG
Sbjct: 18 HLIGIGGAGMSGIARILLARGAQVSGSDAKDSRAFLTLRAQGARIEVGQRAENLDVFDGG 77
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
P+AV+ S+AI + N E+ A+ VP+ R LA L E + + ++G+HGK++T SM
Sbjct: 78 --PSAVIVSTAIKETNPELAAARERDVPVLHRAEALAALMEGHRVACIAGTHGKTSTTSM 135
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
L L+ D + +G + + + +G G FV EADE DG FL +PSVAVVTN+
Sbjct: 136 LTVALQHCRLDPSFAIGGDLNE-SGANAHHGEGGIFVAEADESDGSFLSYTPSVAVVTNV 194
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVV 318
+ +H+D DA ++F F+++I G LV+C A + L + G++ V
Sbjct: 195 EPDHLDHHGTADAYHAVFSEFVRRIDPDGVLVVC-ADDAAAAELATYAEGIGVR-----V 248
Query: 319 SNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPG 378
G+ D +++ YG P+ GG+ ++ + G L ++ + +PG
Sbjct: 249 RRYGRSATGEA-DARVLDYG-------------PSEDGGTVRVVLD-GEEL-RVRVAVPG 292
Query: 379 VHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDF 438
H N++ + L L D A L L+ F GV RRF+ G +YDD+
Sbjct: 293 EHMAFNAVGALLAGLELGADP-------AVLIEGLAAFGGVRRRFEYKGRSADVRVYDDY 345
Query: 439 AHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
AHHPTEV A L+A RQ N ++ VFQPH YSR +FA AL AD+VVV
Sbjct: 346 AHHPTEVEAQLRAVRQTAGNGRVVVVFQPHLYSRTKAFATEFAEALGLADEVVV 399
>gi|315652426|ref|ZP_07905414.1| UDP-N-acetylmuramate--L-alanine ligase [Lachnoanaerobaculum
saburreum DSM 3986]
gi|315485325|gb|EFU75719.1| UDP-N-acetylmuramate--L-alanine ligase [Lachnoanaerobaculum
saburreum DSM 3986]
Length = 437
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/410 (32%), Positives = 218/410 (53%), Gaps = 43/410 (10%)
Query: 88 LSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVAS 147
+S LA++ L++GF+VSGSD S+ + L G + IG + +NI + + V +
Sbjct: 1 MSGLARVLLEKGFKVSGSDTKASNRTKDLENRGIKVFIGQNKNNISDD-----IDLFVYT 55
Query: 148 SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTTASMLAYVLKAM 206
+AI +DN E + AK + + R L + K+ IA+SG+HGK+TT SML+Y+L
Sbjct: 56 AAIHKDNPEFIKAKEKNIKVMTRAQLLGYVMSKFKESIAISGTHGKTTTTSMLSYILLDT 115
Query: 207 GDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF 266
D T VG V + G+++ G G FV EA EY FL L P+V V+ N++ +H+D F
Sbjct: 116 NLDPTISVGGIVKKIR-GNVYIGNGDTFVTEACEYTNSFLELYPTVGVILNIEEDHLDFF 174
Query: 267 EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLW 326
+D D ++ F++F+K G ++I D+IK + +
Sbjct: 175 KDLDDIRDSFKKFVKNTSREGCIIIN----------DKIKNNREIT-------------- 210
Query: 327 GQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSL 386
G++ ++ YG + +D YA ++ + G + L + + L + G HN+ N+L
Sbjct: 211 -MGYEGNVVRYGTEN-SDCYAANIRYDAIGYPTFDLVHKEETYEDVKLCVGGNHNIYNAL 268
Query: 387 AVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEV 445
A + L +G I ++ L +F GV RRF++ G + G I DD+AHHP+E+
Sbjct: 269 AAVCVAFELGVG--------IEDIRRGLLEFKGVDRRFEIKGKLDGITIVDDYAHHPSEI 320
Query: 446 RAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
A L A+ R+P+ L+ VFQPHTY+R L +DFAN L +QV+++ +
Sbjct: 321 SATLNIAK-RYPHDRLVVVFQPHTYTRTKALFEDFANVLKNVEQVIIAKI 369
>gi|154488891|ref|ZP_02029740.1| hypothetical protein BIFADO_02200 [Bifidobacterium adolescentis
L2-32]
gi|154083028|gb|EDN82073.1| UDP-N-acetylmuramate--L-alanine ligase [Bifidobacterium
adolescentis L2-32]
Length = 521
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 149/453 (32%), Positives = 236/453 (52%), Gaps = 44/453 (9%)
Query: 57 TNCTFKRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGL 116
T+ +F EE + D G HF+GIGG+G+S LA++ +QG EV GSD S+ + L
Sbjct: 16 THASFA-PEETVHDL----GATHFIGIGGAGMSVLAEMLHEQGVEVDGSDREPSAKTDRL 70
Query: 117 LEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAK 176
G + G N++G N VV SSAI DN EI+ A G I R LA
Sbjct: 71 QSLGITVEFGQQAKNVEGK------NTVVFSSAIKPDNPEIVAAHEAGERIVHRSDILAL 124
Query: 177 LTEKYNLIAVSGSHGKSTTASMLAYVLKAMGD----DLTAIVGAHVPQFPDGSIFYGG-- 230
L + V+G+HGK+TT+SMLA++L G+ D + +G + Q DG+I GG
Sbjct: 125 LMNAKRAVTVAGAHGKTTTSSMLAHILVNAGEGELADPSYAIGGSI-QGKDGAILDGGHA 183
Query: 231 --GKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGH 288
G V EADE DG F P +A++TN + +H+D + +D ++ F + GH
Sbjct: 184 GKGNVLVAEADESDGSFAKYHPQIAIITNSEADHLDHYGTQDNYRAAF------VDHAGH 237
Query: 289 ----LVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIIT-YGFSSFN 343
+++CGD + ++L + D + V S +++ G + ++ S
Sbjct: 238 ATKAVIMCGDDEGNLAVLRAL--DATVAGRTIVYSTRNAAELGDLNGATLVRIESESETA 295
Query: 344 DWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSH 403
+ AE ++ GG ++ E R +A ++L +PG+HN N+ A I L D ++
Sbjct: 296 ESGAEHFTLHIPGG---LIGEEERRIA-VTLTVPGIHNARNASAAIIAAALLGMDVERAS 351
Query: 404 ESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIA 463
++ + F+G +RRF + GT+ + DD+AHHPTE+ A+L AAR+R+P +
Sbjct: 352 AAV-------TSFLGAARRFQVRGTVSQVTVVDDYAHHPTEIAALLDAARRRYPQSKIRV 404
Query: 464 VFQPHTYSRLVVLKDDFANALSEADQVVVSAVL 496
+FQPH +SR +FA AL++AD V+V+ +
Sbjct: 405 IFQPHLFSRTRFFSSEFAQALAKADDVIVTGIF 437
>gi|302391532|ref|YP_003827352.1| UDP-N-acetylmuramate--L-alanine ligase [Acetohalobium arabaticum
DSM 5501]
gi|302203609|gb|ADL12287.1| UDP-N-acetylmuramate/alanine ligase [Acetohalobium arabaticum DSM
5501]
Length = 469
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 142/406 (34%), Positives = 210/406 (51%), Gaps = 44/406 (10%)
Query: 92 AKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIP 151
A L L G+EVSGSD+ S + L + GA + IGH SNI+G D VV SSAIP
Sbjct: 21 ANLLLDLGYEVSGSDIKESDIVTDLQQKGAKVSIGHQASNIEGAD------EVVLSSAIP 74
Query: 152 QDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLT 211
+DN E++ AK G+PI KR + KL K I++SG+HGK+TT +M A VL+ D T
Sbjct: 75 EDNPELVKAKKEGLPILKRAEMVGKLMSKQQGISISGTHGKTTTTAMAATVLEKNSLDST 134
Query: 212 AIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDA 271
+VG + + G G F+ EADE DG L + P + VVTN++ +H+D +E
Sbjct: 135 ILVGGKLDLISGSNAKLGTGDYFITEADESDGSLLFMDPKIGVVTNIEADHLDYYESCSE 194
Query: 272 VKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHD 331
+ F +FL + G ++ D R ++D++ D
Sbjct: 195 IIDTFSKFLNSLPSDGVGIVSLDDNEIRDMVDRVDTD----------------------- 231
Query: 332 YKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIAT 391
+ITYG ++ + A+ + G I + R L ++ L +PG HN+ N+LAVI
Sbjct: 232 --LITYGLNNKAEIMAKDIELQEFGSKSVIYRYQDR-LGELKLNVPGKHNLSNALAVIGI 288
Query: 392 VLTLIGDKRQSHESIACLKL--PLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVL 449
L H + K+ L F GV RRF+ +G G + DD+AHHPTE+ A L
Sbjct: 289 GL---------HIGLEFSKIAEALKDFTGVKRRFEKLGKYRGAVLVDDYAHHPTELEATL 339
Query: 450 QAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
AA + +IAVFQPH Y+R L ++F+ A +AD+V+++ +
Sbjct: 340 AAA-NNMDFERIIAVFQPHRYTRTKFLLEEFSLAFGDADEVIITDI 384
>gi|258404875|ref|YP_003197617.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfohalobium retbaense
DSM 5692]
gi|257797102|gb|ACV68039.1| UDP-N-acetylmuramate/alanine ligase [Desulfohalobium retbaense DSM
5692]
Length = 454
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 148/418 (35%), Positives = 219/418 (52%), Gaps = 41/418 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH +GIGG+G+S +A++ L G+ V+GSDL ++ + L E GA ++ GH+ + +
Sbjct: 8 IHMIGIGGAGMSGIAEVLLSLGYTVTGSDLSENAAVRRLRELGATIYPGHARGYLGDAE- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSA+ DN E++ A+ VP+ R LA+L IAV G+HGK+TT S
Sbjct: 67 -----VVVRSSAVADDNPELIQAREDSVPVIPRAEMLAELMRLKTGIAVGGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
L + K G D T I+G + + + F G G+ + EADE DG FL L P + VVTN
Sbjct: 122 FLGTIFKEAGLDPTVIIGGRLNSY-GSNAFLGQGEFLIAEADESDGTFLCLLPIMTVVTN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D +H+D + D+ A+ F F+ QI G V+CGD + LL +IK+
Sbjct: 181 VDADHMDFYADQTAIDDSFVHFMNQIPFYGLNVVCGDDPGVQRLLPRIKR---------- 230
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
++TYG ND AE + N GGS + L + RP+ ++ L+ P
Sbjct: 231 ---------------PVVTYGLEEDNDVRAEILGFN--GGSHFRLIYQERPIGELHLKHP 273
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD 437
G HNVLN+LA A L + + C F GV RRF+ G G + DD
Sbjct: 274 GRHNVLNALAAAALALEAGVSEDAVIHGLDC-------FGGVGRRFETKGERDGVLVVDD 326
Query: 438 FAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
+ HHPTE+ A L AR+ +P + L+ +FQPH ++R L F A EAD ++++ +
Sbjct: 327 YGHHPTEIAATLTTARETYPERRLVVLFQPHRFTRTQALFGQFCRAFEEADLLLLTEI 384
>gi|282857260|ref|ZP_06266500.1| UDP-N-acetylmuramate--L-alanine ligase [Pyramidobacter piscolens
W5455]
gi|282584910|gb|EFB90238.1| UDP-N-acetylmuramate--L-alanine ligase [Pyramidobacter piscolens
W5455]
Length = 476
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 140/419 (33%), Positives = 212/419 (50%), Gaps = 40/419 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH +G+GG+G+S LA L + GF VSG D+ ++Y+E L +AG + GH V ++
Sbjct: 14 IHLMGVGGAGMSGLALLFRELGFNVSGCDMGRTAYVEKLEKAGVKILYGHDVHHLD---- 69
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ + + SSAIP N E+ A+ +P+ +R L+ L + N I V+G+HGK+TT S
Sbjct: 70 ACAVDLLAYSSAIPASNPELAEARRKEIPVLQRAELLSLLFDSKNGIGVAGTHGKTTTTS 129
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+++Y+L+ T VG + + G G+ V E DE D F P +VVTN
Sbjct: 130 LISYILEQADMQPTIAVGGELCDIGCNAKL-GMGEYMVAELDESDESFEYFHPLYSVVTN 188
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+DW+HV+ + D AV F RFL+ + GG L +CG +D G+K V
Sbjct: 189 VDWDHVNQYPDLQAVIDAFGRFLRNTKEGGKLFLCG-------------EDAGVKK---V 232
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
+ +DL ++ +G D+YA + + GG +Y +GR + I L I
Sbjct: 233 IEALPNDLKN-----RMYLFGRDPSFDFYAADIQYHCGGGLNYTFYAKGRKMGTIELVIS 287
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHE---SIACLKLPLSKFMGVSRRFDLIGTIY-GCH 433
G HNVL+SLA +HE S ++ + F G RR L
Sbjct: 288 GEHNVLDSLAACGV----------AHELGVSFDIVQKAMRMFHGAKRRLQLRAMCPDNIL 337
Query: 434 IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+YDD+ HHP E+ A L A R +P++ ++ +FQPH Y+R L D FA L+ QVV+
Sbjct: 338 VYDDYGHHPREIEATLNAVRLMYPDRRILLIFQPHRYTRTQALFDRFAEVLASVPQVVL 396
>gi|415727308|ref|ZP_11471406.1| UDP-N-acetylmuramate--alanine ligase [Gardnerella vaginalis
00703Dmash]
gi|388062205|gb|EIK84823.1| UDP-N-acetylmuramate--alanine ligase [Gardnerella vaginalis
00703Dmash]
Length = 534
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 152/448 (33%), Positives = 234/448 (52%), Gaps = 39/448 (8%)
Query: 70 DFKNRK--GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
D KN G +HF+GIGG+G+S LA++ ++G VSG D + + + L E G ++ IG
Sbjct: 33 DSKNASTLGRVHFIGIGGAGMSVLAEMLHEEGVSVSGCDREENDHTKRLEELGISVEIGQ 92
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
+ S+++ D +V SSAI +N EI+ A + GV + R LA L + V+
Sbjct: 93 NASHVESAD------VLVYSSAIKPNNPEIVAAYANGVKLVHRSDILALLLASKTGVTVA 146
Query: 188 GSHGKSTTASMLAYVLKAMG----DDLTAIVGAHVPQFPDGSIFYGG----GKNFVLEAD 239
G+HGK+TT+S+L+++L G D + +G + Q DG++ GG G V EAD
Sbjct: 147 GAHGKTTTSSLLSHILSVAGTGELSDPSYAIGGSI-QSADGTVIDGGHAGKGSVMVAEAD 205
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCAR 299
E DG F PS+A+VTN + +H+D + + + F + H++IC D + AR
Sbjct: 206 ESDGSFEKYRPSIAIVTNAEADHLDHYGSSERYREAFVEHVSH--AIDHVIICADDEGAR 263
Query: 300 SLLDQIKQDT-------GLKYSGGVVSNQSSDLW---GQGHDYKIITYGFSSFNDWYAES 349
+L+++ +T G S S + +L G H+ + G F S
Sbjct: 264 KVLEKMSDETLRATIAYGAYDSWASTSARVQNLAQFAGIKHESEQAVSGREVFTLVLPGS 323
Query: 350 VCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLN-SLAVIATVLTLIGDKRQSHESIAC 408
+ N + E L ++SL IPG+HN N S A+IA VL +G K + A
Sbjct: 324 IAGNAGNAGNAGKIEDSLSL-EVSLLIPGLHNARNASAAIIAAVL--LGMKPEDAARGA- 379
Query: 409 LKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPH 468
F G SRRFD+ G + G + DD+AHHPTE+ A+L+AAR+R+ + L +FQPH
Sbjct: 380 -----QSFRGASRRFDIRGCVNGVTVVDDYAHHPTEIEALLRAARRRYTSAKLRVLFQPH 434
Query: 469 TYSRLVVLKDDFANALSEADQVVVSAVL 496
+SR +FA AL+ AD V+V+ +
Sbjct: 435 LFSRTRAFASEFAKALALADDVIVTGIF 462
>gi|345874731|ref|ZP_08826531.1| UDP-N-acetylmuramate--alanine ligase [Neisseria weaveri LMG 5135]
gi|417958028|ref|ZP_12600945.1| UDP-N-acetylmuramate--alanine ligase [Neisseria weaveri ATCC 51223]
gi|343967420|gb|EGV35665.1| UDP-N-acetylmuramate--alanine ligase [Neisseria weaveri ATCC 51223]
gi|343970090|gb|EGV38288.1| UDP-N-acetylmuramate--alanine ligase [Neisseria weaveri LMG 5135]
Length = 466
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 143/433 (33%), Positives = 216/433 (49%), Gaps = 48/433 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
KNR IHFVGIGGSG++ +A++ F+VSGSD S+ L G ++ GH+
Sbjct: 1 MKNRVRNIHFVGIGGSGMNGIAEVLHNLDFKVSGSDQAQSAVTRHLSGLGVRVYYGHAAE 60
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N+ D VV S+A+ DN E++ A+ +P+ R LA+L + IA++G+H
Sbjct: 61 NVTDAD------VVVTSTAVKADNPEVVAARERKIPVIPRALMLAELMRFKDGIAIAGTH 114
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S+ A +L A G D T ++G + + G G+ V EADE D FL L+P
Sbjct: 115 GKTTTTSLTASILAAAGLDPTFVIGGKLTAAGTNARL-GTGEYIVAEADESDASFLHLTP 173
Query: 251 SVAVVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
++VVTN+D +H+D ++ + + F F+ ++ G +C DS+ R+++ +I +
Sbjct: 174 IMSVVTNIDTDHMDTYDHSVEKLHQAFVTFIHRMPFYGKAFLCIDSEHVRAIVPRISK-- 231
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERG--R 367
TYG D YA V N + + G
Sbjct: 232 -----------------------PFATYGLDDSADIYASDVRANGAQMWFTVHVKDGSLE 268
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
P ++ L +PG HNVLN+LA I L + S+ ++ L+ F GV RRF G
Sbjct: 269 PF-EVRLNMPGRHNVLNALAAIGVAL-------EVGASVEAIQQGLAGFAGVGRRFQSYG 320
Query: 428 TIY-----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFAN 482
+ + DD+ HHP E+ A L AAR +P+ L+ FQPH Y+R L +DF
Sbjct: 321 ELSLPSGGKALLIDDYGHHPAEMEATLSAARGAYPDNRLVLAFQPHRYTRTRDLFEDFVK 380
Query: 483 ALSEADQVVVSAV 495
LS AD VV++ V
Sbjct: 381 VLSTADSVVLTEV 393
>gi|330446844|ref|ZP_08310495.1| UDP-N-acetylmuramate--alanine ligase [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328491035|dbj|GAA04992.1| UDP-N-acetylmuramate--alanine ligase [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 487
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 151/477 (31%), Positives = 234/477 (49%), Gaps = 76/477 (15%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG+G+S +A++ + +G+ +SGSD+ ++ L GA + GHS N+Q
Sbjct: 21 RVERIHFVGIGGAGMSGIAEVLVNEGYRISGSDIAPNAVTNRLTAKGAEIFFGHSAENVQ 80
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
G + VVAS+AI ++N E++ A + +P+ +R LA+L + IA++G+HGK+
Sbjct: 81 G------ASVVVASTAISKENPELMAATELRIPVVRRAEMLAELMRYRHGIAIAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEADEYDGCF 245
TT ++ + G D P F +G + G N + EADE D F
Sbjct: 135 TTTALTTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGCSRYLIAEADESDASF 185
Query: 246 LGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 304
L L P V VVTN++ +H+D + D + +K F FL + G V+C D R LL +
Sbjct: 186 LHLQPMVCVVTNIEADHMDTYGGDFEVLKQTFIDFLHNLPFYGLAVMCIDDPVVRELLPR 245
Query: 305 IKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE 364
+ + ++TYGF+ D + Q G + +
Sbjct: 246 VGR-------------------------PMLTYGFAEDADVRLVNYTQTGQQGH-FTVQR 279
Query: 365 RGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFD 424
+G+P I+L IPG HN LN+ A IA + + A L+ L +F G RRFD
Sbjct: 280 KGKPELDITLNIPGKHNALNATAAIAVA------TEEGVDDDAILR-ALVEFEGTGRRFD 332
Query: 425 LIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
+G + + DD+ HHP+EV ++AAR + +K L+ +FQPH YSR L DDF
Sbjct: 333 HLGEFDTGNGKVMLVDDYGHHPSEVDVTIKAARAGWEDKRLVMIFQPHRYSRTRDLYDDF 392
Query: 481 ANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC-IVRS-------MLPEKQ 529
AN L + D +V+ L ++A + A +C +RS +PEK+
Sbjct: 393 ANVLDQVDVLVM-------LDVYAAGEAPIAGADGRALCRTIRSRGKIDPIFVPEKE 442
>gi|91977859|ref|YP_570518.1| UDP-N-acetylmuramate--L-alanine ligase [Rhodopseudomonas palustris
BisB5]
gi|123762580|sp|Q133X2.1|MURC_RHOPS RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|91684315|gb|ABE40617.1| UDP-N-acetylmuramate--L-alanine ligase [Rhodopseudomonas palustris
BisB5]
Length = 467
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 157/429 (36%), Positives = 227/429 (52%), Gaps = 52/429 (12%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G+ V GSD S+ + L E G + +GH NI G
Sbjct: 8 GPIHFVGIGGIGMSGIAEVLCNLGYTVQGSDASESANVNRLREKGIAISVGHKADNIAGA 67
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D +V S+AI +DN E+L A++ +P+ +R LA+L + IA++G+HGK+TT
Sbjct: 68 D------VLVVSTAIKRDNPELLAARAQRIPVVRRAEMLAELMRLKSCIAIAGTHGKTTT 121
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L A D T I G + + + G G V+EADE DG FL L VAVV
Sbjct: 122 TSMVAALLDAGDVDPTVINGGIINAYGTNARL-GAGDWMVVEADESDGTFLKLPADVAVV 180
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D F+ DAV+ FR F++ + G V+C D ++L+ +I+
Sbjct: 181 TNVDPEHLDHFKTFDAVQDAFRIFVENVPFYGFAVMCIDHPVVQALVGKIE--------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR------PL 369
D +IITYG + D + P+ GS + + R R +
Sbjct: 232 ---------------DRRIITYGENPQADARLLDLKPS-GAGSTFKVAFRDRKAGTAHEI 275
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHE---SIACLKLPLSKFMGVSRRFDLI 426
+ L +PG HN LN++A IA +HE S ++ L+ F GV RRF
Sbjct: 276 TDLMLPMPGPHNALNAVAAIAV----------AHELGLSDDTIRKALAAFGGVRRRFTKT 325
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G G I DD+ HHP E+ AVL+AARQ K +IAV QPH ++RL L ++F ++
Sbjct: 326 GEWNGVTIIDDYGHHPVEIAAVLKAARQSTSAK-VIAVVQPHRFTRLQSLFEEFCTCFND 384
Query: 487 ADQVVVSAV 495
AD V+V+ V
Sbjct: 385 ADTVIVADV 393
>gi|421616046|ref|ZP_16057065.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas stutzeri KOS6]
gi|421618013|ref|ZP_16058994.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas stutzeri KOS6]
gi|409780008|gb|EKN59653.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas stutzeri KOS6]
gi|409782228|gb|EKN61795.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas stutzeri KOS6]
Length = 486
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 152/422 (36%), Positives = 213/422 (50%), Gaps = 45/422 (10%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
HFVGIGG G+ +A++ L G+EVSGSDL S+ E L GA + IGH N+ G D
Sbjct: 22 HFVGIGGVGMCGIAEVLLNLGYEVSGSDLKESASTERLQSFGAQIFIGHQAGNVAGAD-- 79
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
+V SSAI N E+ A +P+ R LA+L + IAV+G+HGK+TT S+
Sbjct: 80 ----VLVVSSAINSANPEVALALEQRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTSL 135
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
LA V A G D T ++G + + G + + EADE D FL L P VAVVTN+
Sbjct: 136 LASVFAAGGLDPTFVIGGRLTAAGTNAQL-GSSRYLIAEADESDASFLHLQPMVAVVTNI 194
Query: 259 DWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
D +H+ + D +K F FL + G V+C D R ++ QI + T
Sbjct: 195 DADHMSTYGGDFGKLKKTFVEFLHNLPFYGLAVLCVDDPVVREIIPQIGRPT-------- 246
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
TYGFS D A +V +L + PL +S+ +P
Sbjct: 247 -----------------TTYGFSEDADVRAINVRQEGMRTHFTVLRDGCEPL-DVSVNMP 288
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----GCH 433
G HNVLN+LA IA + D+ E+I L++F GV RRF + G +
Sbjct: 289 GNHNVLNALATIA----IATDEGIDDEAIV---QGLAEFAGVGRRFQVYGDLPVEGGSVM 341
Query: 434 IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVS 493
+ DD+ HHP EV AV++A R +P + L+ V+QPH YSR L DDF L E++ +++
Sbjct: 342 LVDDYGHHPREVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVQVLGESNVLLLM 401
Query: 494 AV 495
V
Sbjct: 402 EV 403
>gi|260550189|ref|ZP_05824402.1| UDP-N-acetylmuramate-alanine ligase [Acinetobacter sp. RUH2624]
gi|424057652|ref|ZP_17795169.1| UDP-N-acetylmuramate-L-alanine ligase [Acinetobacter nosocomialis
Ab22222]
gi|260406717|gb|EEX00197.1| UDP-N-acetylmuramate-alanine ligase [Acinetobacter sp. RUH2624]
gi|407440168|gb|EKF46686.1| UDP-N-acetylmuramate-L-alanine ligase [Acinetobacter nosocomialis
Ab22222]
Length = 482
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 150/429 (34%), Positives = 220/429 (51%), Gaps = 49/429 (11%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG+G+ +A++ QG+++SGSD+ S + L E G ++IGH NI+
Sbjct: 21 RIKHIHFVGIGGAGMCGIAEVLANQGYKISGSDIKASKTTQQLEENGIKVYIGHEAENIK 80
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
N +V S+AI +N E+ A PI +R L +L + IAV+G+HGK+
Sbjct: 81 N------ANVLVVSTAIDPENPEVKAAIEQRTPIVRRAEMLGELMRYRHGIAVAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S+L +L D T ++G + + G + V EADE D FL L P A
Sbjct: 135 TTTSLLTTMLAEENLDPTYVIGGLLNSTGVNAAL-GESRFIVAEADESDASFLYLQPMAA 193
Query: 254 VVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
+VTN+D +H+D +E D +K F +FL + G V+CGD R +L ++ +
Sbjct: 194 IVTNIDADHMDTYEGSFDKLKDTFVQFLHNLPFYGLAVVCGDDANIREILPRVGR----- 248
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLA 370
+ITYGF+ ND A V Q G S + + +GR
Sbjct: 249 --------------------PVITYGFNEDNDIRAIDVE---QDGMRSHFTVLRKGREPL 285
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
++++ PG+HNVLN+LA I D+ S E+I+ L F GV RRF + G
Sbjct: 286 RLTINQPGLHNVLNALAAIGVAT----DEGVSDEAIS---RALKGFSGVGRRFQVQGEFE 338
Query: 431 ----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
+ DD+ HHP EV A ++AARQ P++ L+ +FQPH YSR DDF LS+
Sbjct: 339 LGEGNVKLVDDYGHHPKEVEATIKAARQSHPDRRLVMLFQPHRYSRTRDCFDDFIEVLSQ 398
Query: 487 ADQVVVSAV 495
DQ+++ V
Sbjct: 399 VDQLLLLEV 407
>gi|295111742|emb|CBL28492.1| UDP-N-acetylmuramate--alanine ligase [Synergistetes bacterium SGP1]
Length = 497
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 140/417 (33%), Positives = 218/417 (52%), Gaps = 41/417 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH +G+GG+G+++LAKL GF+VSG DL ++ L G GHS ++ D
Sbjct: 11 IHLMGMGGAGMASLAKLLSGMGFQVSGCDLSRGESVQELEALGMECLPGHSRDHVDRFD- 69
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
P ++ SSA+ +D E+ A++ GV R L+ L + + V+G+HGK+TT+S
Sbjct: 70 ---PQLLIYSSAVDEDCDELEAARARGVRTAGRGRALSWLFNAASGVGVAGTHGKTTTSS 126
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
ML+ VL G T VGA + ++ G G+ F+ E DE DG F P+V++VTN
Sbjct: 127 MLSLVLSRAGLAPTLYVGARMRDMGTNALL-GEGRLFLAELDESDGSFELFRPAVSIVTN 185
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+DW+HVD F + V F RF + G L++C + + A+ +L+ ++
Sbjct: 186 VDWDHVDHFPSFEDVILAFARFASGRKEGAPLIVCAEDEGAQRMLEGLRG---------- 235
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
++ YG+ DW A + P GG +C +G+ L + L +
Sbjct: 236 ---------------PLLRYGWGRSWDWGAFDLVPRATGGISCSVCRKGKVLGPLELSVS 280
Query: 378 GVHNVLNSLAVIAT--VLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
G HNVLN+LA +A VL + +K + A LK F G +RR GT+ G +
Sbjct: 281 GEHNVLNALAALAAADVLGVPFEK-----AAATLK----DFHGAARRLQTKGTLGGVTVI 331
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
DD+AHHPTE+ A L A R +PN+ ++ ++QPH Y+R L + ALS AD++++
Sbjct: 332 DDYAHHPTEIAATLSALRGIYPNRRILLLYQPHRYTRTAALVEPLTAALSGADEILL 388
>gi|325980956|ref|YP_004293358.1| UDP-N-acetylmuramate--L-alanine ligase [Nitrosomonas sp. AL212]
gi|325530475|gb|ADZ25196.1| UDP-N-acetylmuramate/alanine ligase [Nitrosomonas sp. AL212]
Length = 475
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/432 (31%), Positives = 221/432 (51%), Gaps = 45/432 (10%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
+++ IHFVGIGG+G+S +A++ + ++VSGSDL+ + + L G +++GH+
Sbjct: 1 MRHKVKHIHFVGIGGAGMSGIAEVFVNMKYQVSGSDLMDNPVTQRLANLGIKIYVGHASE 60
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
+ G N VV S+A+ DN E++ AK+ +P+ R LA+L IA++G+H
Sbjct: 61 QVTG------ANVVVTSTAVKSDNPEVVAAKNRNIPVVPRALMLAELLRLRTGIAIAGAH 114
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S++A +L A D T ++G + + G G+ V+EADE D FL L P
Sbjct: 115 GKTTTTSLIASILAAADMDPTFVIGGKL-EAAGCHAKLGSGEFIVVEADESDASFLYLQP 173
Query: 251 SVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
+AVVTN+D +H++ + D + +K F FL+ + G V+C D R ++ I
Sbjct: 174 VLAVVTNIDADHMETYGYDFNKLKQTFVEFLQHLPFYGMAVVCIDDANIREVMPAI---- 229
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPL 369
+S +G D ++ N + V G + +
Sbjct: 230 ----------TKSITTYGLSEDAQVRATNIQHSNHQMKFTAVIGVNGSARRL-------- 271
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
I+L +PG+HN+ N+LA IA + + D A + L++F GV RRF G
Sbjct: 272 -DITLNLPGLHNIQNALAAIAVANEICVPD--------AAIVRALAEFKGVERRFQQFGE 322
Query: 429 IY-----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANA 483
I + DD+ HHP E+ A ++AAR FP + L+ FQPH Y+R + +DF
Sbjct: 323 IRLSMQKSFTLIDDYGHHPAEMEATMKAARGAFPGRRLVVAFQPHRYTRTRDVFEDFTRV 382
Query: 484 LSEADQVVVSAV 495
LS+AD ++++ V
Sbjct: 383 LSQADVLLLTEV 394
>gi|169634770|ref|YP_001708506.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
SDF]
gi|229470259|sp|B0VNZ8.1|MURC_ACIBS RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|169153562|emb|CAP02734.1| UDP-N-acetylmuramate--alanine ligase [Acinetobacter baumannii]
Length = 482
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 148/427 (34%), Positives = 220/427 (51%), Gaps = 45/427 (10%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG+G+ +A++ QG+++SGSD+ S + L E G ++IGH NI+
Sbjct: 21 RIKHIHFVGIGGAGMCGIAEVLANQGYKISGSDINASKTTQQLEENGIKVYIGHEAENIK 80
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
N +V S+AI +N E+ A +PI +R L +L + IAV+G+HGK+
Sbjct: 81 N------ANVLVVSTAIDPENPEVKAAIEQRIPIVRRAEMLGELMRYRHGIAVAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S+L +L D T ++G + + G + V EADE D FL L P A
Sbjct: 135 TTTSLLTTMLAEENLDPTYVIGGLLNSTGVNAAL-GESRFIVAEADESDASFLYLQPMAA 193
Query: 254 VVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
+VTN+D +H+D +E D +K F +FL + G V+CGD R +L ++ +
Sbjct: 194 IVTNIDADHMDTYEGSFDKLKDTFVQFLHNLPFYGLAVVCGDDANIREILPRVGR----- 248
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQI 372
+ITYGF+ ND A V + S + + +GR ++
Sbjct: 249 --------------------PVITYGFNEDNDIRAIDVERDGMR-SHFTVLRKGREPLRL 287
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY-- 430
++ PG+HNVLN+LA I D+ S E+I+ L F GV RRF + G
Sbjct: 288 TINQPGLHNVLNALAAIGVAT----DEGVSDEAIS---RALKGFSGVGRRFQVQGEFELG 340
Query: 431 --GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
+ DD+ HHP EV A ++AARQ P++ L+ +FQPH YSR DDF LS+ D
Sbjct: 341 EGNVKLVDDYGHHPKEVEATIKAARQSHPDRRLVMLFQPHRYSRTRDCFDDFIEVLSQVD 400
Query: 489 QVVVSAV 495
Q+++ V
Sbjct: 401 QLLLLEV 407
>gi|152996626|ref|YP_001341461.1| UDP-N-acetylmuramate--L-alanine ligase [Marinomonas sp. MWYL1]
gi|189028999|sp|A6VYJ7.1|MURC_MARMS RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|150837550|gb|ABR71526.1| UDP-N-acetylmuramate--alanine ligase [Marinomonas sp. MWYL1]
Length = 473
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 145/423 (34%), Positives = 214/423 (50%), Gaps = 58/423 (13%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG G+ +A++ QG++VSGSDL SS + L E G +++GH N+
Sbjct: 19 IHFIGIGGVGMCGIAEVLHNQGYQVSGSDLKASSTTDRLEELGIKIYLGHLEENVYN--- 75
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ +V S+AI + N EI+ K +PI +R LA+L + IAV+G+HGK+TT S
Sbjct: 76 ---AHVIVVSTAINEQNPEIIWGKEHRIPIVRRAEMLAELMRYRHGIAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A +L A G+ T ++G + + G V EADE D FL L P +VTN
Sbjct: 133 LMASILAATGEAPTFVIGGRLTS-AGANAQLGSSAYLVAEADESDASFLHLQPQTVIVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D ++ D + VK F F+ + G V+C D + R +L + +
Sbjct: 192 IDEDHMDTYDGDFEKVKHTFIEFVHNLPFYGLAVLCVDDENVREILPTLSR--------- 242
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE------RGRPLA 370
++TYG D+YA + VQ G CE G PL
Sbjct: 243 ----------------PVLTYGIDQEADFYATEI---VQTGR---YCEFLAHRPEGEPL- 279
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFD---LIG 427
+I L +PG HNVLN+LA IA L D + ++ L F GV RRF +
Sbjct: 280 KIRLPMPGRHNVLNALATIAVATDLGVDA-------SAIQAGLMGFEGVGRRFQEQKPLA 332
Query: 428 TIYGCHIY--DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
G ++ DD+ HHP+EV A ++A R +P K L+ V+QPH Y+R L +DF LS
Sbjct: 333 LPNGSNVMFVDDYGHHPSEVLATIKAIRAGWPEKRLVMVYQPHRYTRTRDLYEDFVRVLS 392
Query: 486 EAD 488
+ D
Sbjct: 393 QVD 395
>gi|206890895|ref|YP_002249131.1| UDP-N-acetylmuramate--alanine ligase [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206742833|gb|ACI21890.1| UDP-N-acetylmuramate--alanine ligase [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 456
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 144/406 (35%), Positives = 214/406 (52%), Gaps = 47/406 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+S +A++ G+ VSGSD+ S + L + G + IGHS NI +
Sbjct: 7 IHFVGIGGIGMSGIAEVLHNMGYTVSGSDIKESDTVRRLKKLGIKVFIGHSSDNIDNTE- 65
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSA+ DN EI+ A+S+G+P+ R LA+L I V+G+HGK+TT S
Sbjct: 66 -----VVVFSSAVKPDNPEIIKARSLGIPVIPRAEMLAELCRLKYSILVAGAHGKTTTTS 120
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+A +L G D T ++G + + G G+ V EADE DG FL LSP+V+V+TN
Sbjct: 121 FIATILSDAGFDPTIVIGGKLKSIGTNAKL-GQGEFLVAEADESDGSFLKLSPAVSVITN 179
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D EH+D F++ +K F F ++ G V+C + + R L+ + +
Sbjct: 180 IDREHLDYFKNLKRIKKAFLEFANKVPFYGVSVLCRECRHIRDLIPHLTR---------- 229
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE---RGRPLAQISL 374
+ +TYGF +D+ A+ N++ S +L + R + L + ++
Sbjct: 230 ---------------RYVTYGFDEASDFCAK----NIEYSSSKVLFDAFFRNKFLGRFAI 270
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHI 434
+PG HNVLN+LA IA L + ES L F G+SRRF+ G G
Sbjct: 271 TVPGNHNVLNALATIAVAKELSIPIEKVRES-------LENFTGISRRFEFKGEKNGVKF 323
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
YDD+ HHPTE++AV++ A P + L +FQPH Y+R L + F
Sbjct: 324 YDDYGHHPTEIKAVIKTALWLKPQR-LCVIFQPHRYTRTRDLMEQF 368
>gi|146305958|ref|YP_001186423.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas mendocina ymp]
gi|421503364|ref|ZP_15950313.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas mendocina DLHK]
gi|189029020|sp|A4XQS5.1|MURC_PSEMY RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|145574159|gb|ABP83691.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas mendocina ymp]
gi|400345837|gb|EJO94198.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas mendocina DLHK]
Length = 480
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 153/426 (35%), Positives = 214/426 (50%), Gaps = 53/426 (12%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
HFVGIGG G+ +A++ L G+EVSGSDL S+ E L GA + IGH+ N + D
Sbjct: 22 HFVGIGGVGMCGIAEVLLNLGYEVSGSDLKASAVTERLESFGAKIFIGHAAENAEQAD-- 79
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
+V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+TT S+
Sbjct: 80 ----VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTSL 135
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
LA V A G D T ++G + + G + + EADE D FL L P V+VVTN+
Sbjct: 136 LASVFAAGGLDPTFVIGGRL-NAAGTNAQLGSSRFLIAEADESDASFLHLQPMVSVVTNI 194
Query: 259 DWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
D +H+ + D + +K F FL + G V+C D R LL Q+ + T
Sbjct: 195 DADHMSTYGGDFNRLKKTFIEFLHNLPFYGLAVLCVDDPVVRELLPQVGRPT-------- 246
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERG--RPLAQISLQ 375
+TYGF+ D A +V +G Y R PL +S+
Sbjct: 247 -----------------VTYGFAEDADVRAINV--RQEGMRTYFTVLRPDCEPL-DVSVN 286
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESI--ACLKLPLSKFMGVSRRFDLIGTIY--- 430
+PG HNVLN+LA IA + E I A + LS F GV RRF + G +
Sbjct: 287 MPGNHNVLNALATIAIA---------TDEGIDDAAIVAGLSGFQGVGRRFQVYGELPVDG 337
Query: 431 -GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
+ DD+ HHP EV AV++A R +P + L+ V+QPH YSR L DDF L EA+
Sbjct: 338 GSVMLVDDYGHHPREVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVQVLGEANV 397
Query: 490 VVVSAV 495
+++ V
Sbjct: 398 LLLVEV 403
>gi|302868924|ref|YP_003837561.1| UDP-N-acetylmuramate/alanine ligase [Micromonospora aurantiaca ATCC
27029]
gi|302571783|gb|ADL47985.1| UDP-N-acetylmuramate/alanine ligase [Micromonospora aurantiaca ATCC
27029]
Length = 493
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/417 (32%), Positives = 210/417 (50%), Gaps = 37/417 (8%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IH +G+GG G++ LA+L L +G VSGS+L + GL G +H H VSN+ G
Sbjct: 18 GRIHLIGVGGVGMAGLARLFLTRGLPVSGSELREWPSLAGLRALGGTIHSSHEVSNLDGV 77
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D VV SSAIPQD++E++ A+ G+ + R LA +AV+G+HGK++T
Sbjct: 78 D------TVVYSSAIPQDHLEMVEARRRGLRVLHRSEALAAAMTGRRTVAVAGTHGKTST 131
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+ VL+ G D + ++G + + G+ +G G++FV+EADE D FL P V++V
Sbjct: 132 TSMVTMVLQQAGTDPSFVIGGEISEVGSGA-HHGTGEHFVVEADESDRSFLIYRPFVSIV 190
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN++ +H++ + D +++ F F + G ++ C D R L + ++ +
Sbjct: 191 TNIEADHLNTYGDLATLEAAFAEFARLTDPAGFVITCADDAGGRRLAETLRAE------- 243
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQ 375
++ TYG S+ D V + G E GRPL +I L
Sbjct: 244 ---------------GRRVWTYGESADADLRMSEVVSSAHGVRFQAEVE-GRPLGEIRLP 287
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
+PG H LNS A + +A + L F GV RRF+ G G +Y
Sbjct: 288 VPGRHMALNSAAAVLAAY-------LLDLPVAAAEAALGTFPGVRRRFERKGAADGVLVY 340
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
D++A+HPT + LQ R+ + LI VFQP+ R + + A AL AD+VV+
Sbjct: 341 DEYAYHPTSMTLALQTLREVAGDGRLIVVFQPYRLYRTRDNQAEIAAALGIADEVVL 397
>gi|193213696|ref|YP_001999649.1| UDP-N-acetylmuramate--L-alanine ligase [Chlorobaculum parvum NCIB
8327]
gi|229486480|sp|B3QLW3.1|MURC_CHLP8 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|193087173|gb|ACF12449.1| UDP-N-acetylmuramate/alanine ligase [Chlorobaculum parvum NCIB
8327]
Length = 471
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 149/420 (35%), Positives = 221/420 (52%), Gaps = 42/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H VGIGG+G+SA+A+L LK GF VSGSDL ++ L E GA + GH ++ +D
Sbjct: 9 VHIVGIGGAGMSAIAELLLKSGFSVSGSDLASGEVIDKLRELGAVVWQGHEAEHVGMSD- 67
Query: 138 SRFPNAVVASSAI-PQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
VV SSA+ P+ NVEI A+ G+P+ KRD L +L I VSG+HGK+TT
Sbjct: 68 -----VVVYSSAVRPESNVEIQAAEKQGIPVIKRDEMLGELMRYKVGICVSGTHGKTTTT 122
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
+M+A +L G T ++G V + GS G G++ V+EADEYD FL L+P++AVV
Sbjct: 123 AMIATMLLESGQSPTVMIGG-VSDYLKGSTVVGEGRHMVIEADEYDRAFLKLTPTIAVVN 181
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+L+ EH+D + D ++ F F ++ G ++ C D RSL+ ++ +
Sbjct: 182 SLESEHMDTYGTMDNLRDSFAAFANKVPFYGRVICCVDWPEIRSLISRLNR--------- 232
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+ T+G D A S +GGS + + G + L +
Sbjct: 233 ----------------RYTTFGIEEPADVMA-SDLEACEGGSVFTVEAFGESYPGVRLGV 275
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL-IGTIYGCHIY 435
PG HNVLN+LA + L + + IA L + G+ RRF + G +
Sbjct: 276 PGRHNVLNALAAFSVGLEI---GLPPEKIIAG----LGAYTGMRRRFQMKFKGGNGLLVV 328
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHP+EV+A ++AAR + ++AVFQPH YSR +F ALS AD + V+ +
Sbjct: 329 DDYAHHPSEVKATVKAARHGWKEHRIVAVFQPHLYSRTSEFAVEFGWALSRADAIYVAGI 388
>gi|90580229|ref|ZP_01236036.1| UDP-N-acetylmuramate--L-alanine ligase [Photobacterium angustum
S14]
gi|90438531|gb|EAS63715.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio angustum S14]
Length = 487
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 142/432 (32%), Positives = 216/432 (50%), Gaps = 61/432 (14%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG+G+S +A++ + +G+ +SGSD+ ++ L GA + GHS NIQ
Sbjct: 21 RVERIHFVGIGGAGMSGIAEVLVNEGYRISGSDIAPNAVTNRLTAKGAEIFFGHSAENIQ 80
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
G + VVAS+AI ++N E++ A + +P+ +R LA+L + IA++G+HGK+
Sbjct: 81 G------ASVVVASTAISKENPELMAATELRIPVVRRAEMLAELMRYRHGIAIAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEADEYDGCF 245
TT ++ + G D P F +G + G N + EADE D F
Sbjct: 135 TTTALTTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGCSRYLIAEADESDASF 185
Query: 246 LGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 304
L L P V VVTN++ +H+D + D + +K F FL + G V+C D R LL +
Sbjct: 186 LHLQPMVCVVTNIEADHMDTYGGDFEVLKQTFIDFLHNLPFYGLAVMCIDDPVVRELLPR 245
Query: 305 IKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE 364
+ + ++TYGF+ D + Q G + +
Sbjct: 246 VGR-------------------------PMLTYGFAEDADVRITNYTQMGQQGH-FTVLR 279
Query: 365 RGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFD 424
+ +P I+L IPG HN LN+ A IA + + A ++ L +F G RRFD
Sbjct: 280 KDKPALNITLNIPGKHNALNATAAIAVA------TEEGVDDDAIMR-ALIEFEGTGRRFD 332
Query: 425 LIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
+G + DD+ HHP+EV +QAAR + +K L+ +FQPH YSR L DDF
Sbjct: 333 HLGEFETGNGNVMLVDDYGHHPSEVDVTIQAARAGWADKRLVMIFQPHRYSRTRDLYDDF 392
Query: 481 ANALSEADQVVV 492
AN L + D +V+
Sbjct: 393 ANVLDQVDVLVM 404
>gi|254455302|ref|ZP_05068731.1| UDP-N-acetylmuramate--alanine ligase [Candidatus Pelagibacter sp.
HTCC7211]
gi|207082304|gb|EDZ59730.1| UDP-N-acetylmuramate--alanine ligase [Candidatus Pelagibacter sp.
HTCC7211]
Length = 464
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 139/415 (33%), Positives = 211/415 (50%), Gaps = 34/415 (8%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+S L+ + +GF++ GSD+ + +E L + + IGH NI
Sbjct: 11 IHFVGIGGIGMSGLSLIMKGKGFKIQGSDISTNKNIERLKKEKIKVLIGHKKQNINK--- 67
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSAI ++N E+L AK +PIYKR LA + I V GSHGK+TT S
Sbjct: 68 ---ATILVVSSAIKKNNPELLEAKKRQLPIYKRGEMLANIVSLTKNIVVVGSHGKTTTTS 124
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A + + D T I G + + S G +LEADE DG F+ + P+ +++TN
Sbjct: 125 LIASIFQETKIDPTIINGGVINSI-NNSAKLGKSDWSILEADESDGSFVYIPPTYSIITN 183
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D EH+D + + + S F F+K++ G IC D + R L+ +I+ Y
Sbjct: 184 IDREHMDYYRSMNELNSYFLNFVKKVPSFGKSFICLDDKNNRHLIKKIENKNFYSYGLDQ 243
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
SN Q DY S F+ + PN ++ + + + + +
Sbjct: 244 KSNFCIKNIKQHKDY-------SQFD---LKIRLPN----------KKNQMIKKFRIPLL 283
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD 437
G HN+ NS+A IA LT+ S+ +K L F GV RRF+ I T+ +DD
Sbjct: 284 GNHNIKNSVAAIAVSLTV-------GLSVLNIKKGLKNFKGVQRRFNKIFTLNKVDFFDD 336
Query: 438 FAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+AHHPTE+ VL + + + I +FQPH SRL LK +F++A AD+V++
Sbjct: 337 YAHHPTEIMEVLDGIKNVYKDYEKICIFQPHRISRLKDLKTEFSHAFKNADKVIL 391
>gi|269101761|ref|ZP_06154458.1| UDP-N-acetylmuramate--alanine ligase [Photobacterium damselae
subsp. damselae CIP 102761]
gi|268161659|gb|EEZ40155.1| UDP-N-acetylmuramate--alanine ligase [Photobacterium damselae
subsp. damselae CIP 102761]
Length = 472
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 145/459 (31%), Positives = 225/459 (49%), Gaps = 68/459 (14%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG+G+S +A++ L +G+ +SGSDL + + L GA + GH+ SN++
Sbjct: 7 RVERIHFVGIGGAGMSGIAEVLLNEGYCISGSDLSANPVTDRLSGKGAQIFFGHAASNVE 66
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
G + VV S+AI Q+N E++ A+ + +P+ +R LA+L + IA++G+HGK+
Sbjct: 67 G------ASVVVVSTAISQENPELVAARELRIPVVRRAEMLAELMRYRHGIAIAGTHGKT 120
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEADEYDGCF 245
TT +++ + G D P F +G + G N + EADE D F
Sbjct: 121 TTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGCSRYLIAEADESDASF 171
Query: 246 LGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 304
L L P V VVTN++ +H+D + D + +K F FL + G V+C D R LL +
Sbjct: 172 LHLQPMVCVVTNIEADHMDTYGGDFEVLKQTFIDFLHNLPFYGLAVMCIDDPVVRELLPR 231
Query: 305 IKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE 364
+ + ++TYGFS D Q G + +
Sbjct: 232 VGR-------------------------PMLTYGFSEDADVRLMDYQQCGQQGF-FTIVR 265
Query: 365 RGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFD 424
+ +P +++L +PG HN LN+ A +A D + L++F G RRFD
Sbjct: 266 KDKPELKVTLNVPGRHNALNATAAVAVATEEGVDDD-------AIIRALAEFQGTGRRFD 318
Query: 425 LIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
+G + + DD+ HHP+EV +QAAR +P+K L+ VFQPH YSR L DDF
Sbjct: 319 HLGEFETGNGTAMLVDDYGHHPSEVDVTIQAARAGWPDKRLVMVFQPHRYSRTRDLYDDF 378
Query: 481 ANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
AN L + D ++ L ++A + A +C
Sbjct: 379 ANVLEQVD-------VLLMLDVYAAGEAPIAGADGRALC 410
>gi|315655254|ref|ZP_07908155.1| UDP-N-acetylmuramate--L-alanine ligase [Mobiluncus curtisii ATCC
51333]
gi|315490509|gb|EFU80133.1| UDP-N-acetylmuramate--L-alanine ligase [Mobiluncus curtisii ATCC
51333]
Length = 499
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 151/453 (33%), Positives = 224/453 (49%), Gaps = 46/453 (10%)
Query: 50 KNSVSVLTNCTFKRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVW 109
K+S + L+N T +F + +GIGG+G+S LA L G++VSGSD V
Sbjct: 5 KDSSTNLSNVTAAHEVPSDQEF-------YLIGIGGAGMSVLALLLHDLGYQVSGSDQVP 57
Query: 110 SSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYK 169
+ + L EAG +++GH + N VV +SAI +DN E AKS+G+ I+
Sbjct: 58 ADTLGQLREAGITVYVGHREEQVPTN------AIVVVTSAIHEDNPEAARAKSLGLEIWH 111
Query: 170 RDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYG 229
R L T + L+AV+G+HGK++T+SM+A+ L +G D + +G + G+ G
Sbjct: 112 RSQALDFCTRSHELVAVAGAHGKTSTSSMMAHALLDIGADPSFAIGGIIADLGTGARL-G 170
Query: 230 GGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHL 289
G FV+EADE DG FL SP+V V+TN++ +H+D + A + F F ++R GG L
Sbjct: 171 SGSAFVIEADESDGSFLNYSPAVEVITNIEPDHLDHWGSAAAFEQAFVDFTGRLRKGGAL 230
Query: 290 VICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSS--FNDWYA 347
V+C D + L +Q+ G ++I+YGF D
Sbjct: 231 VLCADDAGVKRLAEQVSARGGADGP------------------RVISYGFGVPLAGDVVV 272
Query: 348 ESVCPNV---QGGSDYILCERGRPL--AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQS 402
+ P + +G + + G+ + Q++L+I G H +LN+ + L D Q
Sbjct: 273 QLHEPELGPGRGQCQVTITDAGQQVFHGQLNLRIGGQHMLLNAGGALGAAYVLGVDLPQF 332
Query: 403 HESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALI 462
IA L+ F G RR +G G IYDD+ HHPTE+ A LQAAR L+
Sbjct: 333 ---IAALR----TFSGADRRMQPVGERDGVRIYDDYGHHPTEIAATLQAARDLAGKGRLL 385
Query: 463 AVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
FQPH YSR D FA + D + V AV
Sbjct: 386 VCFQPHLYSRTYHNVDAFARVFATVDDLTVCAV 418
>gi|331003528|ref|ZP_08327025.1| UDP-N-acetylmuramate-alanine ligase [Lachnospiraceae oral taxon 107
str. F0167]
gi|330412369|gb|EGG91760.1| UDP-N-acetylmuramate-alanine ligase [Lachnospiraceae oral taxon 107
str. F0167]
Length = 458
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 134/425 (31%), Positives = 220/425 (51%), Gaps = 43/425 (10%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
N I+F GIGG +S LA++ L++GF++SGSD S+ + L E G N+ SNI
Sbjct: 7 NELKHIYFCGIGGISMSGLARVLLEKGFKISGSDTKASNITKDLEERGVNIFNSQQESNI 66
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHG 191
+ + + V ++A+ +DN E + AK +PI R L + K+ IA+SG+HG
Sbjct: 67 KDD-----IDLFVYTAAVHEDNPEFIKAKGKNIPIMTRAELLGYVMSKFKESIAISGTHG 121
Query: 192 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPS 251
K+TT SML+Y+L G D T VG + + G+I G G FV EA EY FL L+P+
Sbjct: 122 KTTTTSMLSYILLDSGQDPTISVGGVLKKIK-GNIHIGSGDVFVTEACEYTNSFLSLNPT 180
Query: 252 VAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
+ V+ N++ +H+D F+D D +++ F++F+ G ++I + + + K
Sbjct: 181 IGVILNIEEDHLDFFKDIDEIRNSFKKFVTNTSDEGCIIINDKIENNEEITENFKG---- 236
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQ 371
K++ YG S +D + ++ + G + L +G
Sbjct: 237 ---------------------KVVRYG-SENSDCFVNNIRYDELGYPTFDLIYKGSTYKD 274
Query: 372 ISLQIPGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+ L + G HN+ N+LA I L +G I +K L +F G RRF++ G +
Sbjct: 275 VKLCVGGNHNIDNALASICVAFELGVG--------IEDIKNGLLEFSGADRRFEIKGKMG 326
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
I DD+AHHP+E+ A L A+ R+P+K L+ FQPHT++R ++FA+ L + D
Sbjct: 327 NITIVDDYAHHPSEIAATLNIAK-RYPHKRLVIAFQPHTFTRTKAFFEEFADVLKDVDNC 385
Query: 491 VVSAV 495
+++ +
Sbjct: 386 IIAKI 390
>gi|339056108|ref|ZP_08648651.1| UDP-N-acetylmuramate--alanine ligase [gamma proteobacterium
IMCC2047]
gi|330720684|gb|EGG98925.1| UDP-N-acetylmuramate--alanine ligase [gamma proteobacterium
IMCC2047]
Length = 482
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 148/444 (33%), Positives = 223/444 (50%), Gaps = 52/444 (11%)
Query: 61 FKRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAG 120
K ++ R IHF+GIGG+G+S +A++ L QG+ +SGSD+ S + L+ G
Sbjct: 4 IKHTAGVVIPEMRRIRQIHFIGIGGAGMSGIAEVLLNQGYSISGSDMRQSRVTDRLVVMG 63
Query: 121 ANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEK 180
+ IGH N++ D VV SSAI ++N EI+ A++ +P+ R L +L
Sbjct: 64 MQVFIGHREENVKEAD------VVVTSSAINEENPEIIFARANRIPLVPRAEMLGELMRY 117
Query: 181 YNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADE 240
+ IAV+G+HGK+TT S+LA +L G D T ++G + + G + V EADE
Sbjct: 118 RHSIAVAGTHGKTTTTSLLASLLAEGGLDPTFVIGGLLNSAGTNAKL-GASRILVAEADE 176
Query: 241 YDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCAR 299
D FL L P A+VTN+D +H+ + D + F FL + G +V C D +
Sbjct: 177 SDASFLHLQPMTAIVTNIDADHMSTYGGDFSKLTDTFISFLHNLPFYGLVVACIDDDNVK 236
Query: 300 SLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSD 359
++L + + +ITYG + D+ A + Q G
Sbjct: 237 AVLPDVSR-------------------------PVITYGVAEEADYRAVDIK---QTGLR 268
Query: 360 YILCERGRPLA----QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSK 415
+ RP Q++L IPG HNVLN++A IA D+ S E+I L K
Sbjct: 269 MTFTAK-RPNDHQDLQVTLNIPGHHNVLNAMAAIAVAT----DEGVSDEAICA---ALQK 320
Query: 416 FMGVSRRFDLIG---TIYGCHIY-DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYS 471
F GV RRF + G T+ G + DD+ HHP EV+A L R +P++ L+ ++QPH YS
Sbjct: 321 FEGVGRRFQICGEFETVNGSVLMVDDYGHHPREVKATLDTVRSSWPDRRLVMLYQPHRYS 380
Query: 472 RLVVLKDDFANALSEADQVVVSAV 495
R L +DF + LSE D +++ V
Sbjct: 381 RTRDLFEDFISVLSEVDSLLLMEV 404
>gi|54310302|ref|YP_131322.1| UDP-N-acetylmuramate--L-alanine ligase [Photobacterium profundum
SS9]
gi|59798288|sp|Q6LMF7.1|MURC_PHOPR RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|46914743|emb|CAG21520.1| putative UDP-N-acetylmuramate-alanine ligase [Photobacterium
profundum SS9]
Length = 487
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 144/449 (32%), Positives = 219/449 (48%), Gaps = 62/449 (13%)
Query: 53 VSVLTNCTFKRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSY 112
+S L N + + + + R IHFVGIGG+G+S +A++ L +G+ +SGSDL ++
Sbjct: 2 MSKLDNQQLAKIRTMVPEMR-RVERIHFVGIGGAGMSGIAEVLLNEGYRISGSDLAPNAV 60
Query: 113 MEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDY 172
+ L + GA + GH+ N+ G + VV S+AI QDN E++ A+ + +P+ +R
Sbjct: 61 TDSLTQKGAEIFFGHAAENVNG------ASVVVVSTAIAQDNPELVAARELRIPVVRRAE 114
Query: 173 WLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGK 232
LA+L + IA++G+HGK+TT +++ + G D P F +G + G
Sbjct: 115 MLAELMRYRHGIAIAGTHGKTTTTALMTQIYFEAGLD---------PTFVNGGLVKSAGT 165
Query: 233 N--------FVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQI 283
N + EADE D FL L P V+VVTN++ +H+D + D + +K F FL +
Sbjct: 166 NARLGCSRYLIAEADESDASFLHLQPMVSVVTNIEADHMDTYGGDFEVLKQTFIDFLHNL 225
Query: 284 RVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFN 343
G V+C D R LL +I + +IITYGFS
Sbjct: 226 PFYGLAVMCVDDPVVRELLPRIGR-------------------------QIITYGFSDDA 260
Query: 344 DWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSH 403
D + G + + G+P + L IPG HN LN+ A +A D
Sbjct: 261 DVRIVEYGQHAHQGH-FTILRAGKPDLNVKLNIPGKHNALNATAAVAVATEEGVDD---- 315
Query: 404 ESIACLKLPLSKFMGVSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNK 459
+ L +F G RRFD +G + DD+ HHP+EV +QAAR + K
Sbjct: 316 ---DAIIRALLEFEGTGRRFDHLGEFETGNGSVMLVDDYGHHPSEVDVTIQAARAGWEKK 372
Query: 460 ALIAVFQPHTYSRLVVLKDDFANALSEAD 488
L+ +FQPH YSR L +DFA+ L + D
Sbjct: 373 RLVMIFQPHRYSRTRDLYEDFAHVLEQVD 401
>gi|254786996|ref|YP_003074425.1| UDP-N-acetylmuramate--L-alanine ligase [Teredinibacter turnerae
T7901]
gi|259509783|sp|C5BP33.1|MURC_TERTT RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|237685124|gb|ACR12388.1| UDP-N-acetylmuramate--alanine ligase [Teredinibacter turnerae
T7901]
Length = 473
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 147/424 (34%), Positives = 212/424 (50%), Gaps = 46/424 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVG+GG+G+S +A++ QG+ +SGSDL S L G +++GH N+ G D
Sbjct: 18 IHFVGVGGAGMSGIAEVLHNQGYLISGSDLRESDVTRRLSAMGMTIYVGHHAKNVHGVD- 76
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSA+ + N E+L A+ +P+ +R L +L + IAV+G+HGK+TT S
Sbjct: 77 -----VVVNSSAVDEANPELLEARQQRIPVVRRAEMLGELMRYRHGIAVAGTHGKTTTTS 131
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A + D T ++G + + G + V EADE D FL L P VAVVTN
Sbjct: 132 LIASIFAEGDKDPTFVIGGLLNSAGTNAAL-GASRYLVAEADESDASFLHLQPMVAVVTN 190
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D +K F FL + G V+CGD SL+ I +
Sbjct: 191 IDADHMDTYGGDFGTLKKTFVEFLHNLPFYGVAVMCGDDPVITSLIPDIAR--------- 241
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+ITYGFS D+ A V I G PL I L +
Sbjct: 242 ----------------TVITYGFSEDCDFKAYDVKQESGKQRFKIKRPEGEPL-DIYLNM 284
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY-----G 431
PG HNVLN+ A +A + + IA ++ L++FMGV RRF + G
Sbjct: 285 PGQHNVLNATAAVAVATD------EGIDDIA-IQQGLAQFMGVGRRFQIYGDYPLPQGGS 337
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+ HHP EV A ++A R +P++ L V+QPH Y+R L +DF LS DQ+V
Sbjct: 338 VMLVDDYGHHPREVAATIRAVRDSWPDRRLFMVYQPHRYTRTRDLYEDFVEVLSSVDQLV 397
Query: 492 VSAV 495
+ V
Sbjct: 398 LLEV 401
>gi|428775368|ref|YP_007167155.1| UDP-N-acetylmuramate--L-alanine ligase [Halothece sp. PCC 7418]
gi|428689647|gb|AFZ42941.1| UDP-N-acetylmuramate--L-alanine ligase [Halothece sp. PCC 7418]
Length = 480
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 151/444 (34%), Positives = 222/444 (50%), Gaps = 61/444 (13%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
VDFK + HF+GIGG G+SALA + K+ ++GSDL S+ E L GA++
Sbjct: 7 VDFKGKP--FHFIGIGGIGMSALAYILAKREIPITGSDLRSSAITERLKVVGAHIFSSQE 64
Query: 129 VSN------------IQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAK 176
N + +D P V+ S+AI DN E A + G PI+ R LA
Sbjct: 65 GRNLDYFFSAQSQNLVSTDDQDCLPQ-VICSTAIHPDNSEYQAALARGCPIFHRSDVLAG 123
Query: 177 LTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL 236
L +Y IAV+G+HGK+TT+S+L YVL G D T +VG V + +G+ G G+ V
Sbjct: 124 LVAEYESIAVAGTHGKTTTSSLLGYVLLEAGIDPTVVVGGEVAAW-EGNARVGEGRYLVA 182
Query: 237 EADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQ 296
EADE DG + L P++ +VTN++ +H D ++ AV IF+ F +Q L+ C D +
Sbjct: 183 EADESDGSLVKLKPAIGIVTNIELDHPDHYQSLSAVVDIFQTFAEQTET---LIGCIDCE 239
Query: 297 CARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKI--ITYGFSSFNDWYAESVCPNV 354
R L + YS QG DY + ITY
Sbjct: 240 TVRETL-----QPDISYSLDC---------NQGADYTVTDITYHGQ-------------- 271
Query: 355 QGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLS 414
G+ + E+G+ L +++L++ G HN+ N+LAVIA R+ + ++
Sbjct: 272 --GAKATVWEQGKALGELNLKLLGCHNLSNALAVIAAA-------RKIGIEFEVIASAIA 322
Query: 415 KFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKA---LIAVFQPHTYS 471
+F G RRF++ G G DD+AHHP+E+ A L A+ R ++ L+A+FQPH YS
Sbjct: 323 QFTGAKRRFEIYGEENGILFVDDYAHHPSELLATLAGAKLRVESQQAQRLVAIFQPHRYS 382
Query: 472 RLVVLKDDFANALSEADQVVVSAV 495
R +FA A AD VV++ V
Sbjct: 383 RTAAFLQEFATAFKSADLVVLTDV 406
>gi|160878268|ref|YP_001557236.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium phytofermentans
ISDg]
gi|189029008|sp|A9KQI8.1|MURC_CLOPH RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|160426934|gb|ABX40497.1| UDP-N-acetylmuramate--alanine ligase [Clostridium phytofermentans
ISDg]
Length = 469
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 141/421 (33%), Positives = 228/421 (54%), Gaps = 34/421 (8%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG +S LA+L +GF VSGSD S ++ L G + IG NI +
Sbjct: 12 VHFIGIGGISMSGLAELLHTKGFTVSGSDAKDSKIVDRLRHLGITIFIGQKAENITED-- 69
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKSTTA 196
+ VV ++A+ DNVE + +P+ R +L ++ +Y N I VSG+HGK+TT
Sbjct: 70 ---IDLVVYTAAVKSDNVEYQAVQKHNIPMLDRADFLGQVMLQYKNAIGVSGTHGKTTTT 126
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM++ ++ D T VG + +G+I G +NF++E+ EY FL +P+ A++
Sbjct: 127 SMVSLMMLEGNFDPTISVGGILDNI-EGNIRIGHSENFIVESCEYKNSFLSFNPAHAIIL 185
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQD--TGLKYS 314
N++ EH+D F+D + +++ F F K++ G+LV+ G L++ + + T +S
Sbjct: 186 NIEAEHLDFFKDIEDIRTSFHTFAKKLPDYGNLVVWGGIDRYEELIEDLSCNVITYGMFS 245
Query: 315 GGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISL 374
Q+ D + D+ A +V + G Y L + G+ + +I+L
Sbjct: 246 SEEEREQNKDRY-----------------DYAACNVTSDDFGLRSYDLYKHGKFVDRINL 288
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHI 434
+ G HNVLNSLA I+ V TL G +++ +K L + G RRF+ G + G I
Sbjct: 289 AVIGDHNVLNSLAAISLVDTLGG-------TMSAIKKALLAYKGTERRFERKGVLNGITI 341
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSA 494
DD+AHHP+E++A L AA +P+K + VFQPHTY+R DF AL+ AD++V++
Sbjct: 342 VDDYAHHPSEIKATLIAAAS-YPHKDIWCVFQPHTYTRTKSFFHDFTTALALADKIVLAD 400
Query: 495 V 495
+
Sbjct: 401 I 401
>gi|190149288|ref|YP_001967813.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|307262601|ref|ZP_07544231.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|229470255|sp|B3GZK9.1|MURC_ACTP7 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|189914419|gb|ACE60671.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|306872024|gb|EFN03738.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 475
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 147/475 (30%), Positives = 234/475 (49%), Gaps = 72/475 (15%)
Query: 60 TFKRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEA 119
F+ + +V R IHF+GIGG+G+S +A++ L +G+++SGSD+ + L EA
Sbjct: 3 NFQDKIKKLVPEMRRVNQIHFIGIGGAGMSGIAEVLLNEGYQISGSDIAEGPVTKRLAEA 62
Query: 120 GANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE 179
GA + IGH N+ G + VVASSAI N E+ AK +P+ +R LA++
Sbjct: 63 GAKVFIGHQAENVAG------ASVVVASSAIDDSNPEVRAAKEARIPVIQRAQMLAEIMR 116
Query: 180 KYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN------ 233
+ IAV+G+HGK+TT +M++ + D P F +G + GKN
Sbjct: 117 FRHGIAVAGTHGKTTTTAMISMIYTEAKLD---------PTFVNGGLVKSAGKNAHLGAS 167
Query: 234 --FVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLV 290
+ EADE D FL L P V+VVTN++ +H+D + D + +K+ + +FL+ + G V
Sbjct: 168 RYLIAEADESDASFLHLQPMVSVVTNIEPDHMDTYGGDFEQMKATYVKFLRNLPFYGLAV 227
Query: 291 ICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESV 350
+C D + + Q+ + +++TYGFS D+ E
Sbjct: 228 MCADDETVMEIAPQVGR-------------------------QVLTYGFSEKADYRIEDY 262
Query: 351 CPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIA--C 408
G ++C G + + L +PG HN LN+ A +A E IA
Sbjct: 263 QQTGFQGHYTVVCPNGERI-DVLLNVPGKHNALNATAALAVA---------KEEGIANEA 312
Query: 409 LKLPLSKFMGVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAV 464
+ L+ F G RRFD +G+ + + DD+ HHPTEV ++AAR + NK ++ +
Sbjct: 313 ILAALADFQGAGRRFDQLGSFIRPNGKVMLVDDYGHHPTEVDVTIKAARSGWENKRVVMI 372
Query: 465 FQPHTYSRLVVLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
FQPH YSR L DDF LS+ D +++ L ++A ++ A + +C
Sbjct: 373 FQPHRYSRTRDLFDDFVQVLSQVDALIM-------LEVYAAGEAPIVGADSKALC 420
>gi|119897176|ref|YP_932389.1| UDP-N-acetylmuramate--L-alanine ligase [Azoarcus sp. BH72]
gi|166222953|sp|A1K3U7.1|MURC_AZOSB RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|119669589|emb|CAL93502.1| probable UDP-N-acetylmuramate-L-alanine ligase [Azoarcus sp. BH72]
Length = 467
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 147/435 (33%), Positives = 225/435 (51%), Gaps = 51/435 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K++ IHFVGIGG+G+S +A++ + G+ VSGSDL S+ L GA + +GH +
Sbjct: 1 MKHKVKRIHFVGIGGAGMSGIAEVLVNLGYSVSGSDLGDSAATRRLKAMGAKVVLGHDAA 60
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N++ D A+V S+A+ DN E++ A++ +PI R LA+L + IA++G+H
Sbjct: 61 NVEAAD------ALVVSTAVKNDNPEVIAARARHIPIVPRAQMLAELMRLKSGIAIAGTH 114
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S++A +L D T ++G + + G G V EADE D FL LSP
Sbjct: 115 GKTTTTSLVASILAEGAMDPTFVIGGRL-NAAGANARLGKGDFLVAEADESDASFLMLSP 173
Query: 251 SVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
++VVTN+D +H+D + D +K F FL+++ G V+C D RS++
Sbjct: 174 VISVVTNIDADHMDTYGHDFARLKQAFVDFLQRLPFYGVAVLCEDDPHVRSIMP------ 227
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDY--ILCERGR 367
+VS Q ++ YG S + AE++ +GG +L G
Sbjct: 228 -------LVSKQ------------VVRYGLSETANIRAENI--RAEGGRMIFDVLRVNGS 266
Query: 368 P--LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
LA + L +PG+HNV N+LA IA + + E+I L++F GV RRF
Sbjct: 267 TTRLADVVLNLPGLHNVRNALAAIAVATEV----QVPDEAIVK---ALAEFSGVGRRFQR 319
Query: 426 IGTIYGCH-----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
G + + DD+ HHP E+ A L AAR FP + L+ FQPH Y+R +DF
Sbjct: 320 YGEVAAPSGGTFTLIDDYGHHPVEMEATLAAARGAFPGRRLVLAFQPHRYTRTRDCFEDF 379
Query: 481 ANALSEADQVVVSAV 495
LS D ++++ V
Sbjct: 380 VKVLSTVDALLLAEV 394
>gi|218886057|ref|YP_002435378.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218757011|gb|ACL07910.1| UDP-N-acetylmuramate/alanine ligase [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 455
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 146/426 (34%), Positives = 217/426 (50%), Gaps = 47/426 (11%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
N+ IH VGIGGSG+S +A++ L G+EV GSD+ + + L + GA ++IGH N+
Sbjct: 4 NKIKKIHMVGIGGSGMSGIAEVLLNLGYEVCGSDMSDGTVVRRLRKLGAEIYIGHGEGNL 63
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
+V S+AI +N E+ A+ G+PI R LA+L IA++G+HGK
Sbjct: 64 TD------AQVLVKSTAIGDENPEVAAARKRGIPIIPRAEMLAELMRLRTGIAIAGTHGK 117
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+TT S+ A + G D T I+G + + + G G + EADE DG FL L P V
Sbjct: 118 TTTTSLTAAIFDEAGTDPTVIIGGRLNAY-GANARLGDGAYLIAEADESDGSFLCLFPIV 176
Query: 253 AVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
VVTN+D +H+D + + A+ F F+ ++ G V+CGD R LL ++K+
Sbjct: 177 TVVTNVDMDHMDHYPSQQAIDDAFVDFMNKVPFYGMNVVCGDDPGVRRLLPRVKR----- 231
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESV-CPNVQGGSDYILCERGRPLAQ 371
++TYGF N AE + C + S + + G + Q
Sbjct: 232 --------------------PVVTYGFGEGNAIRAEVLACAD---SSLFNVIVNGDDIGQ 268
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKL--PLSKFMGVSRRFDLIGTI 429
+ L PG HN+LN+LA I L IA K+ L+KF GV RRF+ G
Sbjct: 269 VRLAQPGRHNILNALAAIGVALEC---------DIAPEKIVAGLAKFGGVGRRFERKGER 319
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
G + DD+ HHP E+ A L ARQ FP++ L+ VFQPH +SR L +F D+
Sbjct: 320 DGVLVVDDYGHHPAEIAATLATARQCFPHRRLVVVFQPHRFSRTQALFGEFCKVFDGVDK 379
Query: 490 VVVSAV 495
++++ +
Sbjct: 380 LLLTEI 385
>gi|283796967|ref|ZP_06346120.1| UDP-N-acetylmuramate--alanine ligase [Clostridium sp. M62/1]
gi|291075380|gb|EFE12744.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium sp. M62/1]
Length = 465
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 148/429 (34%), Positives = 221/429 (51%), Gaps = 37/429 (8%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DF N+ I+F+GIGG +S LA++ + +GF V+GSD S E L GA ++IG
Sbjct: 4 IDF-NKPQHIYFMGIGGISMSGLAEILMDEGFTVTGSDSKESELTEHLRSRGAVIYIGQR 62
Query: 129 VSNI-QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAV 186
NI Q + +AVV ++AI DN E A+ G+P+ R L ++ Y IAV
Sbjct: 63 AENIRQAEQTGKKIDAVVYTAAIHPDNPEFAAAREAGLPMLSRAVLLGEMMRNYREAIAV 122
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
SG+HGK+TT SML+ + D T VG +P G+I GG + F+ EA EY FL
Sbjct: 123 SGTHGKTTTTSMLSEIFLVAEADPTISVGGILPSI-GGNIRVGGPEFFITEACEYTNSFL 181
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 306
P++ V+ N++ +H+D F+D ++S F RF K+ G +VI G+ + + + +K
Sbjct: 182 EFFPTIEVILNIEEDHMDFFKDLADIRSSFTRFAKKTPKQGAVVINGEIEDWQEI---VK 238
Query: 307 QDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERG 366
G ++IT+G D+ A + + + RG
Sbjct: 239 NTEG----------------------RVITFGTDRGFDYSAGEISYDSLARPTFDFYIRG 276
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
+SL + G HNV N+LA A L + S+ +K L F G RRF+
Sbjct: 277 EKRDTLSLGVSGEHNVYNALAAAAAALE-------AGLSLEAVKRGLLSFTGTKRRFEKK 329
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G + G I DD+AHHP E+RA L+ A Q +P+ + VFQPHTY+R D+FA ALS
Sbjct: 330 GVLNGVTIIDDYAHHPQEIRASLKTA-QNYPHNRIWCVFQPHTYTRTKAFLDEFAEALSM 388
Query: 487 ADQVVVSAV 495
AD +V++ +
Sbjct: 389 ADCIVLADI 397
>gi|354558518|ref|ZP_08977773.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfitobacterium
metallireducens DSM 15288]
gi|353546996|gb|EHC16443.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfitobacterium
metallireducens DSM 15288]
Length = 449
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 139/420 (33%), Positives = 219/420 (52%), Gaps = 43/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALK-QGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGND 136
IHFVG+ G+G+SALA+++ + E++GSD+ + + +LE + N+ D
Sbjct: 5 IHFVGVKGTGMSALAQVSAQVDKAEITGSDVSERFFTDTVLERAHIPVLNFDAHNVDNAD 64
Query: 137 GSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
+VAS+A +D+ EI A+ + +P+ +L +L K IA+SG+HGK+TT
Sbjct: 65 ------LIVASAAYGEDHPEIAQARKLNIPVLTYPQYLGRLMSKKRGIAISGTHGKTTTT 118
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
+M L G D + +VG+ VP G+ G G+ F+ E+ EY FL SP ++T
Sbjct: 119 AMAGLTLLKAGIDPSIVVGSDVPSI-GGNAHSGKGEFFLAESCEYRRHFLNYSPEYLIIT 177
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++++H D F+D V S F +++ G + + +D KY
Sbjct: 178 NIEFDHPDYFKDVQDVISAFVELAQKVPASGRIFVWA-------------EDPNRKY--- 221
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+ +Q+ I ++G S D A + + +G S I G L ++ L +
Sbjct: 222 -IKSQAP----------ITSFGLSEEADIQAREIQFHDEGSSMKIYA-FGEYLGEMHLHV 269
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
G HN+LN+LA IA L L Q ES L +F G RRF+ IG G I D
Sbjct: 270 AGKHNILNALATIALCLELGISATQILES-------LCQFSGTKRRFEHIGMNKGALIVD 322
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAVL 496
D+AHHPTE+R+ L+ AR FP++ + A+FQPHT+SR L DDF++A + AD+VV++ +
Sbjct: 323 DYAHHPTEIRSTLEGARLSFPDRRIRAIFQPHTFSRTEKLLDDFSHAFNAADEVVIAEIF 382
>gi|392422309|ref|YP_006458913.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas stutzeri CCUG
29243]
gi|390984497|gb|AFM34490.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas stutzeri CCUG
29243]
Length = 471
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 151/423 (35%), Positives = 214/423 (50%), Gaps = 45/423 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G+EVSGSDL S+ + L GA + IGH N+ G D
Sbjct: 7 IHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKESASTDRLQSFGAQIFIGHQAGNVAGAD- 65
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 66 -----VLVVSSAVNSANPEVALALEQRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTS 120
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+LA V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 121 LLASVFAAGGLDPTFVIGGRLTAAGTNAQL-GSSRYLIAEADESDASFLHLQPMVAVVTN 179
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ + D +K F FL + G V+C D R ++ QI +
Sbjct: 180 IDADHMSTYGGDFGKLKKTFVEFLHNLPFYGLAVLCVDDPFVREIIPQIGR--------- 230
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
I TYGFS D A +V +L + PL +S+ +
Sbjct: 231 ----------------PITTYGFSEDADVRATNVRQEGMRTFFTVLRDGCEPL-DVSVNM 273
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----GC 432
PG HNVLN+LA IA + D+ E+I L++F GV RRF + G +
Sbjct: 274 PGNHNVLNALATIA----IATDEGIDDEAIV---QGLAEFAGVGRRFQVYGDLPVEDGSV 326
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+ DD+ HHP EV AV++A R +P + L+ V+QPH YSR L DDF L E++ +++
Sbjct: 327 MLVDDYGHHPREVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVQVLGESNVLLL 386
Query: 493 SAV 495
V
Sbjct: 387 MEV 389
>gi|393772226|ref|ZP_10360683.1| UDP-N-acetylmuramate--L-alanine ligase [Novosphingobium sp. Rr
2-17]
gi|392722365|gb|EIZ79773.1| UDP-N-acetylmuramate--L-alanine ligase [Novosphingobium sp. Rr
2-17]
Length = 473
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 151/429 (35%), Positives = 228/429 (53%), Gaps = 49/429 (11%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G+ V GSD+ +EGL G + IGHS N++G
Sbjct: 9 GTIHFVGIGGIGMSGIAEVMHNLGYSVQGSDIAEGYVIEGLRGRGIKVMIGHSADNVEG- 67
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
VV S+A+ ++N E+ +A +P+ +R LA+L N +AV+G+HGK+TT
Sbjct: 68 -----AAVVVTSTAVKRENPEVAYALENRIPVVRRAEMLAELMRLKNTVAVAGTHGKTTT 122
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L A D T I G + + + G V+EADE DG FL L ++AVV
Sbjct: 123 TSMIAALLDAGDLDPTVINGGIINSYGSNARL-GASDWMVVEADESDGSFLRLDGTIAVV 181
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D + D VK F F++ + G ++C D ++++ +++
Sbjct: 182 TNIDPEHLDHYGSFDKVKDAFVEFIENVPFYGAALLCIDHPEVQAVIPKVR--------- 232
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS--DYILCERG---RPLA 370
D +++TYGFS+ D E+V P + GG+ D L +R R +
Sbjct: 233 ---------------DRRVVTYGFSAQADIRGENVTP-IPGGNRFDVALRQRDGSFRRIE 276
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
I L +PG HNV N+LA + + + S AC++ SKF GV RRF +G +
Sbjct: 277 AIELPMPGRHNVQNALAAVGVAVEM-------GCSDACIQGGFSKFGGVKRRFTKVGEVE 329
Query: 431 G----CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
+ DD+ HHP E+RAVL AAR+ + +IAV QPH ++RL +DF A ++
Sbjct: 330 LDGGIATVIDDYGHHPVEIRAVLAAAREGVVGR-VIAVVQPHRFTRLRDHMEDFQGAFND 388
Query: 487 ADQVVVSAV 495
AD V + V
Sbjct: 389 ADVVYAAPV 397
>gi|367476918|ref|ZP_09476285.1| UDP-N-acetyl-muramate:alanine ligase, L-alanine adding enzyme
[Bradyrhizobium sp. ORS 285]
gi|365270805|emb|CCD88753.1| UDP-N-acetyl-muramate:alanine ligase, L-alanine adding enzyme
[Bradyrhizobium sp. ORS 285]
Length = 467
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 148/411 (36%), Positives = 221/411 (53%), Gaps = 46/411 (11%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G+ V GSD ++ + L E G + +GH N+ G
Sbjct: 8 GPIHFVGIGGIGMSGIAEVLCNLGYTVQGSDASDNANVARLREKGITVSVGHKAENVAGA 67
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D VV S+AI +DN E++ A++ +P+ +R LA+L + +A++G+HGK+TT
Sbjct: 68 D------VVVVSTAIKRDNPELMAARAQRIPVVRRAEMLAELMRLKSCVAIAGTHGKTTT 121
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L A G D T I G + + + GGG+ V+EADE DG FL L VA+V
Sbjct: 122 TSMVAALLDAGGLDPTVINGGIINAYGTNARL-GGGEWMVVEADESDGTFLKLPADVAIV 180
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D F+ DAV+ FR F++ + G V+C D ++L+ +I+
Sbjct: 181 TNVDPEHLDHFKTFDAVQDAFRAFVENVPFYGFAVMCIDHPVVQALVGKIE--------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR------PL 369
D +IITYG + D + P + GGS + + R R +
Sbjct: 232 ---------------DRRIITYGVNPQADVRLVDLTP-MGGGSSFKVVFRDRKSGATHEI 275
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
A I+L +PG HN N+ A IA R+ S ++ ++ F GV RRF G
Sbjct: 276 ADIALPMPGRHNASNATAAIAVA-------RELGLSDEAIRKAIAGFGGVKRRFTRTGEW 328
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
G + DD+ HHP E+ AVL+AAR+ N ++AV QPH Y+RL L ++F
Sbjct: 329 NGVTVIDDYGHHPVEIAAVLKAAREST-NGKVVAVVQPHRYTRLQSLFEEF 378
>gi|340751161|ref|ZP_08687984.1| UDP-N-acetylmuramate-L-alanine ligase [Fusobacterium mortiferum
ATCC 9817]
gi|340562260|gb|EEO36732.2| UDP-N-acetylmuramate-L-alanine ligase [Fusobacterium mortiferum
ATCC 9817]
Length = 451
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 140/418 (33%), Positives = 232/418 (55%), Gaps = 47/418 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
I+F+GI G G+S LAK+ +G+EV GSDL S + L G +H HS N++G +
Sbjct: 4 IYFIGINGIGMSGLAKIMKCKGYEVEGSDLSRSYVTDELESMGIVVHNEHSEKNLEGKNF 63
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ ++ASSAI ++N E ++A G+ + KR LA L + IAV+G+HGK+TT+S
Sbjct: 64 ----DMIIASSAIKKENPEYIYALENGIKVVKRGELLAMLLNEECGIAVAGTHGKTTTSS 119
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN-FVLEADEYDGCFLGLSPSVAVVT 256
M A V+ + D T +VG +P+ GS G N F+ EADE D FL ++P+ +++T
Sbjct: 120 MAASVMLPL--DPTIVVGGILPEI--GSNAKPGKSNYFIAEADESDNSFLYMNPTYSIIT 175
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQI-RVGGHLVICGDSQCARSLLDQIKQDTGL-KYS 314
N++ +H+ E+ ++++I + F K I + + IC D + R L IK++ + +YS
Sbjct: 176 NIEADHL---ENHGSLENIIKSFSKFIDQTSKEVFICSDCEILRGLA-AIKENKKITRYS 231
Query: 315 GGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISL 374
+ ++++D++ + I G +G + Y + +G + + +L
Sbjct: 232 ---IKDKTADIYAEN-----IEVG----------------EGKTSYDVVIKGEKIGRFTL 267
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHI 434
IPG HN+LNSL VI L +++ ++ KF G RR++++ + G I
Sbjct: 268 YIPGEHNILNSLPVIYLALEFGLEEKD-------IERAFEKFRGSKRRYEVLYSGNGIRI 320
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
DD+AHHPTE++A LQ A + + +FQPH YSR+ L ++F NA +AD+VV+
Sbjct: 321 IDDYAHHPTEIKATLQGATS-IEDSKITVIFQPHRYSRVKFLLENFKNAFEKADEVVL 377
>gi|331092522|ref|ZP_08341344.1| UDP-N-acetylmuramate-alanine ligase [Lachnospiraceae bacterium
2_1_46FAA]
gi|330400743|gb|EGG80346.1| UDP-N-acetylmuramate-alanine ligase [Lachnospiraceae bacterium
2_1_46FAA]
Length = 461
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 146/427 (34%), Positives = 223/427 (52%), Gaps = 43/427 (10%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DFK + +HF+GIGG +S LA++ LK+GF VSGSD S+ + L GA + G
Sbjct: 4 IDFK-KPIHVHFIGIGGISMSGLAEILLKEGFTVSGSDNKESALTDHLAGKGATIFYGQK 62
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVS 187
SNI DG + VV ++AI +DN E A +P+ R L +L Y IAVS
Sbjct: 63 ASNII--DG---IDVVVYTAAIHEDNEEFAEAVRQNIPMLSRAELLGQLMTNYECPIAVS 117
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT SML++VL D T VG + + +G+I G FV EA EY FL
Sbjct: 118 GTHGKTTTTSMLSHVLLEGEKDPTISVGG-ILKAINGNIRVGNSGVFVTEACEYTNSFLH 176
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQI--RVGGHLVICGDSQCARSLLDQI 305
P ++++ N++ +H+D F+D D ++ F RF + + G L+I G+ + ++ D
Sbjct: 177 FLPKISIILNVEEDHMDFFKDIDDIRQSFHRFAQLLPQNEEGTLIINGEIEKIEAITD-- 234
Query: 306 KQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER 365
G +++TYG D+ A+++ N G + +
Sbjct: 235 -----------------------GLTCRVLTYGLHGDYDYSAKNISYNETGCTSFDFYRF 271
Query: 366 GRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
G +ISL + G HNV N+L+ IA +G+ ++ + +K L F G RRF+
Sbjct: 272 GEFADRISLSVTGEHNVSNALSAIA-----VGE--LTNVPLESIKKGLLSFSGTDRRFEY 324
Query: 426 IGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
G + G I DD+AHHPTE+ A L + + +P++ +FQPHTY+R +FA ALS
Sbjct: 325 KGELNGFTIIDDYAHHPTEITATLSSVKH-YPHRETWCIFQPHTYTRTKAFFHEFAEALS 383
Query: 486 EADQVVV 492
AD V++
Sbjct: 384 LADHVLL 390
>gi|375337373|ref|ZP_09778717.1| UDP-N-acetylmuramate--L-alanine ligase [Succinivibrionaceae
bacterium WG-1]
Length = 481
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 139/427 (32%), Positives = 222/427 (51%), Gaps = 52/427 (12%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG+G++ +A++ +G++V+GSD+ S+ L G +HIGHS N+ G
Sbjct: 18 IHFIGIGGAGMNGIAEVLANEGYKVTGSDIAESAVTAHLRAKGIEIHIGHSADNVIG--- 74
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTTA 196
N VV SSAI +N E A + +P+ +R LA+L +Y L IAV+G+HGK+TT
Sbjct: 75 ---ANVVVVSSAIKPENPEWQKALELRIPVVRRAEMLAELM-RYRLGIAVAGTHGKTTTT 130
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
S+++ + G D T ++G + + G G+ + EADE D FL L P ++VT
Sbjct: 131 SLVSSIYAEAGRDPTYVIGG-LLNSAGVNAHLGAGRYLIAEADESDASFLHLQPICSIVT 189
Query: 257 NLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
N++ +H+D + D + +K+ F FL + G V+CGD + +SL+ ++ +
Sbjct: 190 NIEADHMDTYGGDFNNLKNTFVEFLHNLPFYGVAVLCGDDEVIKSLIPRVGR-------- 241
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS--DYILCERGRPLAQIS 373
K+ITYG S+ D Y + Q GS + + R + +
Sbjct: 242 -----------------KVITYGSSADCDLY---ITDYKQEGSHATFNVHVRDEQVIPVF 281
Query: 374 LQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL-----IGT 428
L +PG H LN+ A IA L + + + + L F GV RRF IG
Sbjct: 282 LNLPGYHMALNATAAIAVAL-------EDNIEVDAILRALKNFQGVGRRFTQYGEFDIGN 334
Query: 429 IYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
+ DD+ HHP+EV+A ++A R +P++ L+ +FQPH Y+R +DF N L E D
Sbjct: 335 GSKAMLIDDYGHHPSEVKATIKAVRNGWPDRRLVMIFQPHRYTRTRDCFEDFINVLGEVD 394
Query: 489 QVVVSAV 495
++++ V
Sbjct: 395 ELILMEV 401
>gi|414174958|ref|ZP_11429362.1| UDP-N-acetylmuramate-L-alanine ligase [Afipia broomeae ATCC 49717]
gi|410888787|gb|EKS36590.1| UDP-N-acetylmuramate-L-alanine ligase [Afipia broomeae ATCC 49717]
Length = 481
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 152/429 (35%), Positives = 227/429 (52%), Gaps = 52/429 (12%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G+ V GSD ++ + L + G + IGH N+ G
Sbjct: 21 GPIHFVGIGGIGMSGIAEVLCNLGYTVQGSDASENANVTRLRDKGIKISIGHKAENVNGA 80
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D +V S+AI +DN E++ A+ + +P+ +R LA+L + IA++G+HGK+TT
Sbjct: 81 D------VMVVSTAIKRDNPELMAARGLRIPVVRRAEMLAELMRLKSCIAIAGTHGKTTT 134
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L A D T I G + + + G G V+EADE DG FL L VA+V
Sbjct: 135 TSMVATLLDAGNMDPTVINGGIINAYGTNARL-GAGDWMVVEADESDGTFLKLPADVAIV 193
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D F+ +AV+ FR F++ + G V+C D ++L+ +I+
Sbjct: 194 TNVDPEHLDHFKTFEAVQDAFRAFVEGVPFYGFAVMCIDHPVVQALVGKIE--------- 244
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR------PL 369
D +IITYG + +D + P GGS + + R R +
Sbjct: 245 ---------------DRRIITYGENPQSDARLVDLVP-FSGGSKFKVAFRHRKTDAAHEI 288
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHE---SIACLKLPLSKFMGVSRRFDLI 426
+ + L +PG HN LN+ A IA +HE S ++ L+ F GV RRF
Sbjct: 289 SDLVLPMPGRHNALNATAAIAV----------AHEIGISDDAIRKALAGFGGVKRRFTRT 338
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G G I DD+ HHP E+ AVL+AAR K +IAV QPH Y+RL L ++F ++
Sbjct: 339 GEWNGVTIIDDYGHHPVEIAAVLKAARDSTKGK-VIAVVQPHRYTRLQSLFEEFCTCFND 397
Query: 487 ADQVVVSAV 495
AD V+V+ +
Sbjct: 398 ADTVIVADI 406
>gi|392943856|ref|ZP_10309498.1| UDP-N-acetylmuramate-alanine ligase, partial [Frankia sp. QA3]
gi|392287150|gb|EIV93174.1| UDP-N-acetylmuramate-alanine ligase, partial [Frankia sp. QA3]
Length = 321
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 129/327 (39%), Positives = 187/327 (57%), Gaps = 24/327 (7%)
Query: 72 KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSN 131
+ R +HF+GIGG+GLS LA++ L G VSGSD S + L G + +G + +
Sbjct: 3 RQRTQHVHFLGIGGAGLSPLAQIHLAGGGRVSGSDAEDSPRVATLRARGVPVRVGPAPAA 62
Query: 132 IQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHG 191
+ V+ASSA+ D+ EIL A+S+G+P+ +R WL +LT Y L+AV+GSHG
Sbjct: 63 EAIAAELAGADVVIASSALADDHPEILTARSLGLPVRRRSEWLPELTAGYRLVAVAGSHG 122
Query: 192 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPS 251
KSTT++ML VL+A G D TA++GA V Q G+ GGG FVLEADEY G F GL P+
Sbjct: 123 KSTTSAMLTLVLRAAGLDPTAVIGAEVSQL-GGNALAGGGDVFVLEADEYGGAFAGLEPA 181
Query: 252 VAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
+AV+TN++WEH DIF DE +V++ F F +++R GG LV+CGD ++L ++++
Sbjct: 182 IAVITNVEWEHPDIFPDEASVQAAFTAFARRVRPGGRLVVCGDDPGVAAVLAELRRQAAP 241
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYI---LCERGRP 368
+ ++ YGF + W A V G D + G+
Sbjct: 242 AGA------------------PVLDYGFGTDRLWRAVDVA--TAPGDDTARAGVLHAGQE 281
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTL 395
+ + L IPG H+VLN+LAV+A L
Sbjct: 282 IGTLMLAIPGRHSVLNALAVLAVATEL 308
>gi|238917838|ref|YP_002931355.1| UDP-N-acetylmuramate--alanine ligase [Eubacterium eligens ATCC
27750]
gi|259509770|sp|C4Z4L9.1|MURC_EUBE2 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|238873198|gb|ACR72908.1| UDP-N-acetylmuramate--alanine ligase [Eubacterium eligens ATCC
27750]
Length = 459
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 151/429 (35%), Positives = 224/429 (52%), Gaps = 42/429 (9%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DF N IHF+GIGG +S LAK+ L +GF VSGSD S+ + L+ G + + S
Sbjct: 4 IDFNNPI-HIHFIGIGGISMSGLAKILLSKGFSVSGSDSHSSALTDELIGDGCLVSVPQS 62
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVS 187
NI + + VV ++AI DN E AK G+P+ R L ++ Y N I ++
Sbjct: 63 AGNITND-----IDLVVYTAAIHPDNPEFKAAKEAGLPMLTRAELLGQIMTVYKNAINIA 117
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT SM++ +L A D T VG + G+ GG FV EA EY FL
Sbjct: 118 GTHGKTTTTSMVSEILLAASMDPTISVGGILNSIG-GNTRVGGDNYFVAEACEYTNSFLS 176
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
+P++ ++ N+ +H+D F+D D ++ F+ F +++ G L+I D
Sbjct: 177 FNPTMNIILNVKEDHLDFFKDIDDIRHSFKLFTEKLPSDGTLIINTD------------- 223
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAES-VCPNVQGGSDYILCERG 366
+ N + + Q D ++IT+G Y+ S + + G Y L G
Sbjct: 224 ----------IDNY--EYFYQDTDCEVITFGSDPAKSMYSASDIAYDELGRCTYSLLING 271
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
I+L +PG+HNV NSLA IA L D +K LS F G +RRF+
Sbjct: 272 EKADTITLGVPGLHNVYNSLAAIAATRKLSVDMEH-------IKAGLSNFKGTNRRFEKK 324
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
GT G + DD+AHHP E+RA L +A +P+ + VFQPHTYSR +L ++FA+ALS
Sbjct: 325 GTFNGVTVIDDYAHHPDEIRATLSSAAH-YPHNRVWVVFQPHTYSRTKLLFNEFADALSH 383
Query: 487 ADQVVVSAV 495
AD+VV++ +
Sbjct: 384 ADKVVLAKI 392
>gi|296112510|ref|YP_003626448.1| UDP-N-acetylmuramate-alanine ligase [Moraxella catarrhalis RH4]
gi|416155424|ref|ZP_11603909.1| UDP-N-acetylmuramate--L-alanine ligase [Moraxella catarrhalis
101P30B1]
gi|416220468|ref|ZP_11625446.1| UDP-N-acetylmuramate--L-alanine ligase [Moraxella catarrhalis
103P14B1]
gi|416228189|ref|ZP_11627490.1| UDP-N-acetylmuramate--L-alanine ligase [Moraxella catarrhalis
46P47B1]
gi|416234958|ref|ZP_11629977.1| UDP-N-acetylmuramate--L-alanine ligase [Moraxella catarrhalis
12P80B1]
gi|416237276|ref|ZP_11630790.1| UDP-N-acetylmuramate--L-alanine ligase [Moraxella catarrhalis BC1]
gi|416244309|ref|ZP_11634371.1| UDP-N-acetylmuramate--L-alanine ligase [Moraxella catarrhalis BC7]
gi|416246034|ref|ZP_11634924.1| UDP-N-acetylmuramate--L-alanine ligase [Moraxella catarrhalis BC8]
gi|416251289|ref|ZP_11637643.1| UDP-N-acetylmuramate--L-alanine ligase [Moraxella catarrhalis CO72]
gi|416253744|ref|ZP_11638396.1| UDP-N-acetylmuramate--L-alanine ligase [Moraxella catarrhalis O35E]
gi|421779325|ref|ZP_16215819.1| UDP-N-acetylmuramate-alanine ligase [Moraxella catarrhalis RH4]
gi|295920204|gb|ADG60555.1| UDP-N-acetylmuramate-alanine ligase MurC [Moraxella catarrhalis
BBH18]
gi|326564127|gb|EGE14365.1| UDP-N-acetylmuramate--L-alanine ligase [Moraxella catarrhalis
46P47B1]
gi|326564829|gb|EGE15037.1| UDP-N-acetylmuramate--L-alanine ligase [Moraxella catarrhalis
12P80B1]
gi|326566496|gb|EGE16643.1| UDP-N-acetylmuramate--L-alanine ligase [Moraxella catarrhalis
103P14B1]
gi|326568016|gb|EGE18108.1| UDP-N-acetylmuramate--L-alanine ligase [Moraxella catarrhalis BC7]
gi|326570680|gb|EGE20714.1| UDP-N-acetylmuramate--L-alanine ligase [Moraxella catarrhalis BC1]
gi|326571236|gb|EGE21259.1| UDP-N-acetylmuramate--L-alanine ligase [Moraxella catarrhalis BC8]
gi|326573081|gb|EGE23054.1| UDP-N-acetylmuramate--L-alanine ligase [Moraxella catarrhalis CO72]
gi|326577221|gb|EGE27114.1| UDP-N-acetylmuramate--L-alanine ligase [Moraxella catarrhalis
101P30B1]
gi|326577784|gb|EGE27656.1| UDP-N-acetylmuramate--L-alanine ligase [Moraxella catarrhalis O35E]
gi|407813766|gb|EKF84546.1| UDP-N-acetylmuramate-alanine ligase [Moraxella catarrhalis RH4]
Length = 486
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 143/422 (33%), Positives = 219/422 (51%), Gaps = 47/422 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+ +A++ QG+ V+GSD+ ++ E L G +H+GH SNI
Sbjct: 26 IHFVGIGGAGMCGIAEVLANQGYVVTGSDIKANAMTERLENLGVTVHVGHDASNI----- 80
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ + VV SSAI + N EI A +P+ +R L +L + IAV+G+HGK+TT S
Sbjct: 81 -KMADVVVVSSAIDRQNPEIRAALKAHIPVVRRADMLGELMRYRHGIAVAGAHGKTTTTS 139
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+L +L G D T ++G + + G + V EADE D FL L P VVTN
Sbjct: 140 LLTMMLTEAGLDPTYVIGGKLNASGKNAAL-GASRYLVAEADESDASFLSLRPMACVVTN 198
Query: 258 LDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H++ +E D +K + +FL + G V+CGD + +++D I +
Sbjct: 199 IDEDHMETYEGSFDKLKQAYVQFLHNMPFYGLAVLCGDDKELYAMIDDIAR--------- 249
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+ITYG ND A V + +L + +PL I+L I
Sbjct: 250 ----------------PVITYGLEKHNDVQAVDVIADGTKTHFTVLRKDKKPLP-ITLNI 292
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH--- 433
PG+HNV N+L I T+ D+ S ++I + KF GV RRF+ G+
Sbjct: 293 PGIHNVYNALGAI----TMATDEGVSDKAIC---QAVEKFAGVGRRFENNGSYPLTDGSG 345
Query: 434 ---IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHPTE+ ++AARQ +P++ L+ +FQPH YSR +F N LS+ D++
Sbjct: 346 DVVLIDDYGHHPTEIAMTIKAARQSYPDRRLVMMFQPHRYSRTRDCFSEFVNVLSQVDKL 405
Query: 491 VV 492
++
Sbjct: 406 IL 407
>gi|334143298|ref|YP_004536454.1| UDP-N-acetylmuramate--L-alanine ligase [Thioalkalimicrobium
cyclicum ALM1]
gi|333964209|gb|AEG30975.1| UDP-N-acetylmuramate--L-alanine ligase [Thioalkalimicrobium
cyclicum ALM1]
Length = 457
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 147/433 (33%), Positives = 220/433 (50%), Gaps = 51/433 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K + IHFVGIGG G++ +A++ + GF VSGSD+ + + L GA + +GH
Sbjct: 1 MKEQVRHIHFVGIGGVGMAGIAEVCINLGFSVSGSDIRRHATVIRLEALGAKIQLGHQPE 60
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
+Q D VV SSAI +DN E AKS +P+ R LA+L IA++G+H
Sbjct: 61 WVQQAD------VVVVSSAIAKDNPEASWAKSSRIPVIPRAEMLAELMRMRYGIAIAGTH 114
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S+ A +L G D T ++G + Q + G + V EADE D FL L+P
Sbjct: 115 GKTTTTSLTAAILTQGGLDPTFVIGGQLNQVGSNARL-GSSRYLVAEADESDASFLHLAP 173
Query: 251 SVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
++V+TN+D +H++ ++ D + + F+ ++ G V+C D + ++ + +
Sbjct: 174 MMSVITNIDMDHMETYQGDFSRLIHTYNEFINRLPFYGLTVLCLDDPNLKQMMPDVLR-- 231
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG---GSDYILCERG 366
K+ TYGF D A+ V N Q S++ + G
Sbjct: 232 -----------------------KVRTYGF----DADADVVAVNWQSKGLTSEFEVITAG 264
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
R + L IPG HNV N+LA IA L L + ++ L+ F GV RRF++
Sbjct: 265 REPFNVLLNIPGQHNVRNALAAIAVALEL-------DVPVTAIQQALATFAGVGRRFEVY 317
Query: 427 GT-IYGCH---IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFAN 482
+ G H + DD+ HHPTE+ A +Q AR F K L+ VFQPH YSR L DDF
Sbjct: 318 PQRMIGGHQVTLVDDYGHHPTELSATIQTARDAFVGKRLVLVFQPHRYSRTRDLFDDFIA 377
Query: 483 ALSEADQVVVSAV 495
AL +AD ++++ V
Sbjct: 378 ALLKADLIILAPV 390
>gi|53729118|ref|ZP_00134082.2| COG0773: UDP-N-acetylmuramate-alanine ligase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126207507|ref|YP_001052732.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165975477|ref|YP_001651070.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|303250498|ref|ZP_07336695.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307244820|ref|ZP_07526919.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307249218|ref|ZP_07531215.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|307251540|ref|ZP_07533447.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307253774|ref|ZP_07535628.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307256040|ref|ZP_07537828.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|307258231|ref|ZP_07539974.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|307260470|ref|ZP_07542165.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|166222951|sp|A3MY91.1|MURC_ACTP2 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|226706335|sp|B0BRH8.1|MURC_ACTPJ RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|126096299|gb|ABN73127.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165875578|gb|ABY68626.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|302650486|gb|EFL80645.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306854265|gb|EFM86471.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306858742|gb|EFM90801.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306861004|gb|EFM93010.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306863258|gb|EFM95198.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306865462|gb|EFM97357.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306867691|gb|EFM99536.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306869873|gb|EFN01655.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 475
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 147/475 (30%), Positives = 234/475 (49%), Gaps = 72/475 (15%)
Query: 60 TFKRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEA 119
F+ + +V R IHF+GIGG+G+S +A++ L +G+++SGSD+ + L EA
Sbjct: 3 NFQDKIKKLVPEMRRVNQIHFIGIGGAGMSGIAEVLLNEGYQISGSDIAEGPVTKRLAEA 62
Query: 120 GANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE 179
GA + IGH N+ G + VVASSAI N E+ AK +P+ +R LA++
Sbjct: 63 GAKVFIGHQAENVAG------ASVVVASSAIDDSNPEVRAAKEARIPVIQRAQMLAEIMR 116
Query: 180 KYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN------ 233
+ IAV+G+HGK+TT +M++ + D P F +G + GKN
Sbjct: 117 FRHGIAVAGTHGKTTTTAMISMIYTEAKLD---------PTFVNGGLVKSAGKNAHLGAS 167
Query: 234 --FVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLV 290
+ EADE D FL L P V+VVTN++ +H+D + D + +K+ + +FL+ + G V
Sbjct: 168 RYLIAEADESDASFLHLQPMVSVVTNIEPDHMDTYGGDFEQMKATYVKFLRNLPFYGLAV 227
Query: 291 ICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESV 350
+C D + + Q+ + +++TYGFS D+ E
Sbjct: 228 MCADDETVIEIAPQVGR-------------------------QVLTYGFSEKADYRIEDY 262
Query: 351 CPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIA--C 408
G ++C G + + L +PG HN LN+ A +A E IA
Sbjct: 263 QQTGFQGHYTVVCPNGERI-DVLLNVPGKHNALNATAALAVA---------KEEGIANEA 312
Query: 409 LKLPLSKFMGVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAV 464
+ L+ F G RRFD +G+ + + DD+ HHPTEV ++AAR + NK ++ +
Sbjct: 313 ILAALADFQGAGRRFDQLGSFIRPNGKVMLVDDYGHHPTEVDVTIKAARSGWENKRVVMI 372
Query: 465 FQPHTYSRLVVLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
FQPH YSR L DDF LS+ D +++ L ++A ++ A + +C
Sbjct: 373 FQPHRYSRTRDLFDDFVQVLSQVDALIM-------LEVYAAGEAPIVGADSKALC 420
>gi|323491028|ref|ZP_08096220.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio brasiliensis LMG
20546]
gi|323314692|gb|EGA67764.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio brasiliensis LMG
20546]
Length = 486
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 141/432 (32%), Positives = 218/432 (50%), Gaps = 61/432 (14%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHF+GIGG+G+S +A++ L +G+++SGSD+ + E L + GA + IGH+ N
Sbjct: 21 RVKCIHFIGIGGAGMSGIAEVLLNEGYQISGSDIAENPITERLTQKGATVFIGHAEEN-- 78
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
+ VV S+AI ++N EI+ A++ +P+ +R LA+L + IAV+G+HGK+
Sbjct: 79 ----VSQASVVVVSTAINEENPEIIAARAARIPVVRRAEMLAELMRFRHGIAVAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEADEYDGCF 245
TT +++ + G D P F +G + G N + EADE D F
Sbjct: 135 TTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGSSRILIAEADESDASF 185
Query: 246 LGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 304
L L P V++VTN++ +H+D + D + +K F FL + G ++C D R L+
Sbjct: 186 LHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAIVCVDDPVVRELIPG 245
Query: 305 IKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE 364
I + ++ITYGFS D + Q G + +
Sbjct: 246 ISR-------------------------QVITYGFSEDADVRIANYRQEGQQGK-FTVIR 279
Query: 365 RGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFD 424
+G+ I+L IPG HN LN+ A IA + S E+I ++ G RRFD
Sbjct: 280 QGKADLDITLNIPGRHNALNASAAIAVAT----EDDISDEAILN---AMAGTQGTGRRFD 332
Query: 425 LIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
+G + + DD+ HHPTEV +QAAR + +K L+ +FQPH YSR L DDF
Sbjct: 333 HLGEFDTGNGHAMLVDDYGHHPTEVDVTIQAARNGWQDKRLVMIFQPHRYSRTRDLYDDF 392
Query: 481 ANALSEADQVVV 492
AN L + D +++
Sbjct: 393 ANVLEQVDVLIM 404
>gi|225619257|ref|YP_002720483.1| UDP-N-acetylmuramate--alanine ligase [Brachyspira hyodysenteriae
WA1]
gi|254765984|sp|C0QXF2.1|MURC_BRAHW RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|225214076|gb|ACN82810.1| UDP-N-acetylmuramate--alanine ligase [Brachyspira hyodysenteriae
WA1]
Length = 462
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 148/429 (34%), Positives = 222/429 (51%), Gaps = 44/429 (10%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
F RK IHF+GIGG G+SA+A + GF ++GSDL ++ E L +G ++ GH
Sbjct: 2 FTKRKEKIHFIGIGGIGMSAIASVLNAIGFTITGSDLAKTAKTESLESSGIKVYYGHKAQ 61
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
NI+ + AVV SSAI N EI+ AKS + + R LA+L IA+SGSH
Sbjct: 62 NIEDD-----VTAVVTSSAISPTNEEIIEAKSKKITVISRGEMLAELMRLRYGIAISGSH 116
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGA-HVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLS 249
GK+TT S+++ ++ G + I+G H + + + V EADE DG FL LS
Sbjct: 117 GKTTTTSLISQIMMHAGLNPVCIIGGNHFNLKSNAACNDLSSEYMVCEADESDGSFLRLS 176
Query: 250 PSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
P + VVTN+D +H+D + + +A++ F F+ ++ G +C + + L
Sbjct: 177 PVINVVTNIDNDHLDYYGNVEALRVAFLEFINKVPFYGCSFLCFEDNVVKDL-------- 228
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILC-ERGRP 368
+ + K +YGFS D+Y + V+ Y
Sbjct: 229 -----------------SKSANKKYYSYGFSKDYDFYVDRDSIRVEAPITYFTAYHNSEC 271
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
L + S+ + G+HNVLNSLA I + L D IA +K L F GV RR +
Sbjct: 272 LGEFSVPLIGIHNVLNSLASIGVGIHLGID-------IADIKEGLKTFEGVGRRLN---K 321
Query: 429 IYGCHI--YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
+Y I +DD+AHHPTE++A L + R + N+ +IAVFQPH YSR +L +DF A ++
Sbjct: 322 LYDKEITLFDDYAHHPTEIKATLSSVRNAYKNRRIIAVFQPHRYSRTELLLNDFEYAFND 381
Query: 487 ADQVVVSAV 495
AD+V++S +
Sbjct: 382 ADEVIISDI 390
>gi|399519381|ref|ZP_10760176.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399112477|emb|CCH36734.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 480
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 153/426 (35%), Positives = 213/426 (50%), Gaps = 53/426 (12%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
HFVGIGG G+ +A++ L G+EVSGSDL S+ E L GA + IGH N + D
Sbjct: 22 HFVGIGGVGMCGIAEVLLNLGYEVSGSDLKASAVTERLENFGATIFIGHRAENAEQAD-- 79
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
+V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+TT S+
Sbjct: 80 ----VLVVSSAVNTSNPEVATALGRRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTSL 135
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
LA V A G D T ++G + + G + + EADE D FL L P V+VVTN+
Sbjct: 136 LASVFAAGGLDPTFVIGGRL-NAAGTNAQLGSSRFLIAEADESDASFLHLQPMVSVVTNI 194
Query: 259 DWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
D +H+ + D + +K F FL + G V+C D R LL Q+ + T
Sbjct: 195 DADHMSTYGGDFNRLKKTFIEFLHNLPFYGLAVLCVDDPVVRELLPQVGRPT-------- 246
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERG--RPLAQISLQ 375
+TYGF+ D A +V +G Y R PL +S+
Sbjct: 247 -----------------VTYGFAEDADVRAINV--RQEGMRTYFTVLRPDCEPL-DVSVN 286
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESI--ACLKLPLSKFMGVSRRFDLIGTIY--- 430
+PG HNVLN+LA IA + E I A + LS F GV RRF + G +
Sbjct: 287 MPGNHNVLNALATIAIA---------TDEGIDDAAIVAGLSGFQGVGRRFQVYGELPVDG 337
Query: 431 -GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
+ DD+ HHP EV AV++A R +P + L+ V+QPH YSR L DDF L EA+
Sbjct: 338 GSVMLVDDYGHHPREVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVQVLGEANV 397
Query: 490 VVVSAV 495
+++ V
Sbjct: 398 LLLVEV 403
>gi|388569360|ref|ZP_10155758.1| UDP-N-acetylmuramate--L-alanine ligase [Hydrogenophaga sp. PBC]
gi|388263415|gb|EIK89007.1| UDP-N-acetylmuramate--L-alanine ligase [Hydrogenophaga sp. PBC]
Length = 465
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 152/429 (35%), Positives = 218/429 (50%), Gaps = 53/429 (12%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ L QGF +SGSDL S+ L GA + IGH +I+G D
Sbjct: 8 IHFVGIGGAGMSGIAEVLLNQGFTISGSDLGESAATRRLESLGAKVCIGHEAKHIEGAD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
A+V S+A+ DN E++ A + VP+ R LA+L +A++G+HGK+TT S
Sbjct: 67 -----AIVTSTAVKADNPEVVAAHAKLVPVVPRAVMLAELMRMKKGVAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A V G D T ++G + + G G+ V+EADE D FL L P ++VVTN
Sbjct: 122 LVASVFAEAGLDPTFVIGGRL-NSAGANAALGSGEYIVVEADESDASFLNLLPVISVVTN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D +K F FL ++ G V+C D R +L QI +
Sbjct: 181 IDADHMDTYGHDFGRLKGAFVDFLHKMPFYGAAVVCVDDPAIREILPQIAR--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER----GRPLAQI 372
I +YG S D ++ GG + +R P +
Sbjct: 232 ----------------PITSYGLS--EDAQVRALNVRAVGGQMHFTVQRRNGVALPDLDV 273
Query: 373 SLQIPGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY- 430
L +PG HNVLNSLA I + L + D+ A LK L+ F GV RRF G
Sbjct: 274 VLNLPGQHNVLNSLAAIGIAVELGVPDE-------AVLK-ALAGFKGVGRRFQRYGEAAL 325
Query: 431 --GCHI--YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G HI DD+ HHP E+ A + AAR FP + L+ FQPH Y+R +DF + +
Sbjct: 326 TGGGHITVVDDYGHHPVEMAATIAAARGAFPGRRLVLAFQPHRYTRTRDCFEDFVKVIGQ 385
Query: 487 ADQVVVSAV 495
AD V+++ V
Sbjct: 386 ADAVLLAEV 394
>gi|56476226|ref|YP_157815.1| UDP-N-acetylmuramate--L-alanine ligase [Aromatoleum aromaticum
EbN1]
gi|81358257|sp|Q5P6Z7.1|MURC_AZOSE RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|56312269|emb|CAI06914.1| UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8)
(UDP-N-acetylmuramoyl-L-alanine synthetase), gene: MURC
OR RSC2843 OR RS00262 [Aromatoleum aromaticum EbN1]
Length = 471
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 150/439 (34%), Positives = 221/439 (50%), Gaps = 55/439 (12%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K++ IHFVGIGG+G+S +A++ GF VSGSDL ++ L G + +GH+
Sbjct: 1 MKHKVKRIHFVGIGGAGMSGIAEVLANLGFMVSGSDLGENAATRRLAALGVQVRVGHAAE 60
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N+ G D AVV S+A+ DN E++ A+S VPI R LA+L + IA++G+H
Sbjct: 61 NVAGAD------AVVISTAVRNDNPEVVAARSRHVPIVPRAQMLAELMRLKHGIAIAGTH 114
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S++A +L G D T ++G + + G G V EADE D FL L+P
Sbjct: 115 GKTTTTSLVASILAEGGMDPTFVIGGKL-NAAGANARLGKGDFLVAEADESDASFLLLTP 173
Query: 251 SVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
++V+TN+D +H+D + D +K F FL+ + G V+C D RS++ + +
Sbjct: 174 VISVITNIDADHMDTYGHDFARLKQAFVDFLQHLPFYGVAVLCEDDPHVRSIMPLVSK-- 231
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS---DYILCERG 366
+++ YG S + AE+V +GG D +
Sbjct: 232 -----------------------QVVRYGLSESANIRAENV--RAEGGRMLFDVVRTNGS 266
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRF--- 423
I L +PGVHNVLN+LA IA + A + L++F GV RRF
Sbjct: 267 VSRLPIELNLPGVHNVLNALAAIAVAT-------EVQVPDAAIIKALAEFRGVGRRFQRY 319
Query: 424 ------DLIGTIYG-CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVL 476
D GT G C + DD+ HHP E+ A L AAR FP + L+ FQPH Y+R
Sbjct: 320 GEVALRDAEGTPQGSCTLIDDYGHHPVEMAATLAAARGAFPGRRLVLAFQPHRYTRTRDC 379
Query: 477 KDDFANALSEADQVVVSAV 495
+DF LS D ++++ V
Sbjct: 380 FEDFVKVLSTVDALLLAEV 398
>gi|218961094|ref|YP_001740869.1| UDP-N-acetylmuramate--L-alanine ligase
(UDP-N-acetylmuramoyl-L-alanine synthetase) [Candidatus
Cloacamonas acidaminovorans]
gi|167729751|emb|CAO80663.1| UDP-N-acetylmuramate--L-alanine ligase
(UDP-N-acetylmuramoyl-L-alanine synthetase) [Candidatus
Cloacamonas acidaminovorans str. Evry]
Length = 464
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 148/423 (34%), Positives = 220/423 (52%), Gaps = 43/423 (10%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG G+S +A+ QG E++GSDL S L G + GH+ NI
Sbjct: 4 RTRKIHFVGIGGIGMSGIAEFLHNQGLEITGSDLKKSDITTHLESLGIKIFEGHNPENIG 63
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
D VV SSAI DN EI+ A + +P+ +R LA++T I ++G+HGK+
Sbjct: 64 DAD------VVVKSSAINDDNPEIVSAYEMKIPVIRRAELLAEITRMSFSIGIAGTHGKT 117
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
T+ SM VL++ G + T IVG V F ++ G GK V+EADEYD FL L+P +A
Sbjct: 118 TSTSMAGSVLESAGLEPTIIVGGKVKNFGSNNVM-GSGKYIVVEADEYDHSFLTLTPCIA 176
Query: 254 VVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 313
+TN+D +H+D + + D +KS F + ++ G ++ C D +++L I +
Sbjct: 177 GITNVDADHLDCYRNLDEIKSSFIEYANKVPFFGSVIACLDDPGVQAILPFIHK------ 230
Query: 314 SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPLAQI 372
KI+TYGFS D A + ++QG S Y L + L +I
Sbjct: 231 -------------------KIVTYGFSRQADVQARDI--DMQGFNSSYDLLFKDYKLGRI 269
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC 432
SL++ G HN+ NSL + L L ++ L KF GV RRFDL G G
Sbjct: 270 SLKVTGKHNIQNSLLAASIGLEL-------DIPFPAIQDGLGKFSGVYRRFDLKGEAGGI 322
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+YDD+AHHPTE+ A L+ + + ++A+FQPH YSR ++F + D +++
Sbjct: 323 TVYDDYAHHPTEIIATLEGFKDS-AKRRIVALFQPHLYSRTRDFYEEFGKSFFSCDCLIL 381
Query: 493 SAV 495
+ +
Sbjct: 382 API 384
>gi|400288889|ref|ZP_10790921.1| UDP-N-acetylmuramate--L-alanine ligase [Psychrobacter sp. PAMC
21119]
Length = 478
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 142/425 (33%), Positives = 220/425 (51%), Gaps = 47/425 (11%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R +HFVGIGGSG+ +A++ QG++VSGSD+ S + L + G + IGH NI
Sbjct: 20 RIQHLHFVGIGGSGMCGIAEVMNNQGYQVSGSDIAESLVTKRLQQIGIEISIGHDSKNIA 79
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
D +V SSAI + N E+ A +P+ +R L +L + IAV+G+HGK+
Sbjct: 80 NAD------VIVVSSAIDRSNPEVKAALEARLPVVRRADMLGELMRYRHGIAVAGAHGKT 133
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S+L ++ D T ++G + + G + V EADE D FL L P A
Sbjct: 134 TTTSLLTTMMAEGQLDPTYVIGGKLNASGKNAAL-GSSRFLVAEADESDASFLSLHPMAA 192
Query: 254 VVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
+VTN+D +H++ +E+ D +K+ + +FL+ + G V+CGD +++D I +
Sbjct: 193 IVTNIDQDHMETYENSFDKLKAAYIQFLQNMPFYGLAVVCGDDPELYAMIDDIGR----- 247
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPLAQ 371
++T+G FND + +G + + + R R +
Sbjct: 248 --------------------PVLTFGLEPFNDVQGVDLV--TEGTKTHFTVLRRDREPLR 285
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY- 430
++L IPG HNV N+LA I T+ D+ E+I K L KF GV RRF+ ++
Sbjct: 286 LTLNIPGTHNVYNALAAI----TMATDEGVDDEAI---KRALQKFEGVGRRFEQHASVDI 338
Query: 431 ---GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ DD+ HHP EV A ++AARQ FP++ L+ +FQPH YSR DDF LS
Sbjct: 339 DDGNVLLIDDYGHHPKEVDATIKAARQSFPDRRLVMLFQPHRYSRTRDCFDDFVEVLSSV 398
Query: 488 DQVVV 492
D++++
Sbjct: 399 DELLL 403
>gi|381162549|ref|ZP_09871779.1| UDP-N-acetylmuramate--alanine ligase [Saccharomonospora azurea
NA-128]
gi|379254454|gb|EHY88380.1| UDP-N-acetylmuramate--alanine ligase [Saccharomonospora azurea
NA-128]
Length = 474
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 143/414 (34%), Positives = 214/414 (51%), Gaps = 32/414 (7%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
H +GIGG+G+S +A++ L +G +VSGSD S L GA + +G N+ DG
Sbjct: 18 HLIGIGGAGMSGIARILLARGAQVSGSDAKDSRAFLTLRAQGARIEVGQRAENLDVFDGG 77
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
P+AV+ S+AI + N E+ A+ VP+ R LA L E + + ++G+HGK++T SM
Sbjct: 78 --PSAVIVSTAIKETNPELAAARERDVPVLHRAEALAALMEGHRVACIAGTHGKTSTTSM 135
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
L L+ D + +G + + + +G G FV EADE DG FL +PSVAVVTN+
Sbjct: 136 LTVALQHCRLDPSFAIGGDLNE-SGANAHHGEGGIFVAEADESDGSFLSYTPSVAVVTNV 194
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVV 318
+ +H+D DA ++F F+++I G LV+C A + L + G++ V
Sbjct: 195 EPDHLDHHGTADAYHAVFSEFVRRIDPDGVLVVC-ADDAAAAELATYAEGIGVR-----V 248
Query: 319 SNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPG 378
G+ D +++ YG P+ GG+ ++ G ++ + +PG
Sbjct: 249 RRYGRSATGEA-DARVLDYG-------------PSEDGGTVRVVL--GGEELRVRVAVPG 292
Query: 379 VHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDF 438
H N++ + L L D A L L+ F GV RRF+ G +YDD+
Sbjct: 293 EHMAFNAVGALLAGLELGADP-------AVLIEGLAAFGGVRRRFEYKGRSADVRVYDDY 345
Query: 439 AHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
AHHPTEV A L+A RQ N ++ VFQPH YSR +FA AL AD+VVV
Sbjct: 346 AHHPTEVEAQLRAVRQTAGNGRVVVVFQPHLYSRTKAFATEFAEALGLADEVVV 399
>gi|355673326|ref|ZP_09058923.1| UDP-N-acetylmuramate-L-alanine ligase [Clostridium citroniae
WAL-17108]
gi|354814792|gb|EHE99391.1| UDP-N-acetylmuramate-L-alanine ligase [Clostridium citroniae
WAL-17108]
Length = 440
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 139/410 (33%), Positives = 219/410 (53%), Gaps = 40/410 (9%)
Query: 88 LSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVAS 147
+S LA++ L++GF V+GSD + + L + GA ++ G +NI+ G + VV +
Sbjct: 1 MSGLAEILLEEGFTVTGSDSHETELTDRLTDRGARVYYGQRAANIEKEPGI---DVVVYT 57
Query: 148 SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKSTTASMLAYVLKAM 206
+AI +DN E + K G+P+ R L ++ Y +AVSG+HGK+TT SM+ +L A
Sbjct: 58 AAIHEDNPEFMAVKEKGIPMLSRAELLGEMMRNYKQAVAVSGTHGKTTTTSMITDILLAG 117
Query: 207 GDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF 266
D T VG + Q G+I GG + FV EA EY FL P++ V+ N++ +H+D F
Sbjct: 118 DMDPTISVGG-ILQDIGGNIRVGGPELFVTEACEYTNSFLSFFPTMEVILNIEEDHLDFF 176
Query: 267 EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLW 326
+D ++ FR F +++ G LV+ + +D+I +D LK
Sbjct: 177 KDIQDIRHSFRLFAEKLPAAGLLVVNSGIEA----VDEITKD--LK-------------- 216
Query: 327 GQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSL 386
+++T+G + + + A+++ + Y L +G + +I+L + G HNV NSL
Sbjct: 217 -----CRVVTFGKDAASTYTAQNISYDEYARPSYDLVVQGEIVNRITLGVTGEHNVYNSL 271
Query: 387 AVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEV 445
A IA + L +G + L KF G RRF+ G + G I DD+AHHP E+
Sbjct: 272 AAIAVAMELGVG--------FDAVMSGLKKFTGTDRRFEKKGEVGGVTIIDDYAHHPQEI 323
Query: 446 RAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
RA L AA+ +P+K L VFQPHTY+R D FA+ LS AD V+++ +
Sbjct: 324 RATLSAAKN-YPHKRLWCVFQPHTYTRTKAFLDQFADTLSSADVVILADI 372
>gi|160894558|ref|ZP_02075334.1| hypothetical protein CLOL250_02110 [Clostridium sp. L2-50]
gi|156863869|gb|EDO57300.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium sp. L2-50]
Length = 460
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 219/429 (51%), Gaps = 42/429 (9%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DF N +HF+GIGG +S LA++ +K+GF+V+GSD+ S+ + L + GA ++IG +
Sbjct: 4 IDF-NHPINVHFMGIGGISMSGLAEILIKEGFKVTGSDMKASNMTDKLSDMGALINIGQT 62
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVS 187
SNI + VV ++AI DN E AK+ +P+ R L ++ Y +AVS
Sbjct: 63 ASNITDQ-----IDLVVYTAAIHPDNEEFQAAKAKNIPMLTRAQLLGQIMTNYKYSVAVS 117
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT +ML+Y++ D T VG + G+I G FV EA EY F
Sbjct: 118 GTHGKTTTTAMLSYIMLEADVDPTISVGGIIDDIG-GNIRVGSSDYFVTEACEYTNSFHA 176
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
SP ++++ N+D +H+D F + + F F + G +++ GD
Sbjct: 177 FSPYISIILNVDADHLDFFSGIEEIAESFHTFATKTPENGKVIVNGD------------- 223
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR 367
+KY V + DL Q +IT+G N + A ++ + G Y L G
Sbjct: 224 ---MKYFDTV----TRDLKCQ-----VITFGEDPKNHYSAANIRFDEFGRPTYTLVIDGE 271
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
+ I+L + G HNV NSL+ IA L D I +K L G RRF+ G
Sbjct: 272 NITDITLHVFGKHNVYNSLSAIAAATELGID-------IDAIKAGLLHCKGAERRFEYKG 324
Query: 428 TIY-GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
TI + DD+AHHPTE+ A L AA+ ++ L VFQPHTYSR L DDFA LS
Sbjct: 325 TILDNVKVMDDYAHHPTEIAATLAAAKNTDYHE-LWCVFQPHTYSRTYALFDDFAKVLSV 383
Query: 487 ADQVVVSAV 495
D V+V+ +
Sbjct: 384 CDHVIVADI 392
>gi|119478635|ref|ZP_01618538.1| UDP-N-acetylmuramate--L-alanine ligase [marine gamma
proteobacterium HTCC2143]
gi|119448412|gb|EAW29663.1| UDP-N-acetylmuramate--L-alanine ligase [marine gamma
proteobacterium HTCC2143]
Length = 477
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 153/439 (34%), Positives = 217/439 (49%), Gaps = 48/439 (10%)
Query: 64 NEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANL 123
N ++ R IHFVGIGG+G+ +A++ L G+++SGSD+ S L E G +
Sbjct: 8 NPGFVIPEMRRIKKIHFVGIGGAGMCGIAEVLLNTGYQISGSDIQVSKVTRRLQEKGITV 67
Query: 124 HIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL 183
IGH SNI G D VV S+A+ DN EIL A + +PI R LA+L +
Sbjct: 68 FIGHRESNISGVD------VVVCSTAVKDDNPEILEAMAHRIPIVPRAEMLAELMRYRHG 121
Query: 184 IAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDG 243
IAV+G+HGK+TT S++A V D T ++G + + G + V EADE D
Sbjct: 122 IAVAGTHGKTTTTSLIASVFAEARLDPTFVIGGLLNSAGTNAQL-GESRFLVAEADESDA 180
Query: 244 CFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLL 302
FL L P V+VVTN++ +H+ ++ D + +K F FL + G V+C D R LL
Sbjct: 181 SFLHLQPMVSVVTNIEADHMATYDGDFNKLKKTFVEFLHNLPFYGMAVMCIDDDVVRELL 240
Query: 303 DQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYIL 362
+ + T +TYGFS D+ V N G
Sbjct: 241 PAVGRAT-------------------------LTYGFSHDADFSIVDV--NKLGLRTSFS 273
Query: 363 CERGRPLAQISLQI--PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVS 420
+R QI + I PG HNVLN+ A IA D+ E+I + + KF GV
Sbjct: 274 VKRPGKHKQIDITINMPGDHNVLNATAAIAVAT----DEGIDDEAI---QRGIEKFEGVG 326
Query: 421 RRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVL 476
RRF + G + DD+ HHPTEV A + AARQ +P++ L+ V+QPH Y+R L
Sbjct: 327 RRFQVYGEFDIEEGSVLLVDDYGHHPTEVEATISAARQAWPDRRLVMVYQPHRYTRTKDL 386
Query: 477 KDDFANALSEADQVVVSAV 495
+DF LS D +++ V
Sbjct: 387 YEDFVRVLSTVDSLLLLEV 405
>gi|116333684|ref|YP_795211.1| UDP-N-acetylmuramate--L-alanine ligase [Lactobacillus brevis ATCC
367]
gi|122269629|sp|Q03RJ2.1|MURC_LACBA RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|116099031|gb|ABJ64180.1| UDP-N-acetylmuramate--L-alanine ligase [Lactobacillus brevis ATCC
367]
Length = 443
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 149/431 (34%), Positives = 221/431 (51%), Gaps = 77/431 (17%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYME-GLLEAG--------ANLHIGHSV 129
HFVGI GSG+SALA + +GF+V GSD+ ++ + GL +AG AN+H G +V
Sbjct: 8 HFVGIKGSGMSALALILHDKGFKVQGSDITQYTFTQRGLEQAGIDVMAFDEANIHEGLTV 67
Query: 130 SNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGS 189
+A ++ D+ EI A+ +G+P+Y+ +L L E Y I V+G+
Sbjct: 68 ---------------IAGNSFTDDHPEIKKAREMGLPVYRYHEFLGHLIEGYTSIGVAGA 112
Query: 190 HGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGG----KNFVLEADEYDGCF 245
HGK++T +LA+VL + + ++G DGS G G + FV EADEY F
Sbjct: 113 HGKTSTTGLLAHVLSGVA-PTSYLIG-------DGS---GKGTPNARFFVYEADEYRRHF 161
Query: 246 LGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 305
L P A++TN+D++H D + D V S F KQ++ G + GD R L
Sbjct: 162 LATKPDYAIMTNIDFDHPDYYTGIDDVYSAFETLAKQVKKG--IFAWGDDPELRKL---- 215
Query: 306 KQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER 365
K D + Y YG S +D+ A ++ + GS + +
Sbjct: 216 KTDVPVYY-----------------------YGTSDRDDFQARNIKRSTT-GSTFDVYHD 251
Query: 366 GRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
L + + G HNVLNSLAVIA ++ +K L+ F GV RRF
Sbjct: 252 DEFLGNFEIHLFGEHNVLNSLAVIAVAYF-------EKVNMDEIKHELADFKGVKRRF-T 303
Query: 426 IGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
+ I DD+AHHP+E++A L AARQ++P+K +IAVFQPHT+SR + L DDFA +L+
Sbjct: 304 ERKLADMTIIDDYAHHPSEIKATLDAARQKYPDKEIIAVFQPHTFSRTIALMDDFAKSLN 363
Query: 486 EADQVVVSAVL 496
AD+V ++ +
Sbjct: 364 LADKVFLTNIF 374
>gi|385677338|ref|ZP_10051266.1| UDP-N-acetylmuramate--L-alanine ligase [Amycolatopsis sp. ATCC
39116]
Length = 469
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 142/414 (34%), Positives = 209/414 (50%), Gaps = 32/414 (7%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
H +GIGG+G+S +A++ L +G VSGSD S L GA + IG N+ G
Sbjct: 12 HLIGIGGAGMSGIARILLARGARVSGSDAKDSRAFLTLRAQGAEIGIGQRPENLDALPGG 71
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
P+AVV S+AI + N E++ A+ G+P+ R LA L + + ++G+HGK++T SM
Sbjct: 72 --PSAVVVSTAIKESNPELVAARERGIPVLHRAQALALLMAGHRVACIAGTHGKTSTTSM 129
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
L L+ D + +G + + + +G G FV EADE DG FL SPSVAVVTN+
Sbjct: 130 LTVALQHCRLDPSFAIGGDLNE-SGANAHHGEGGLFVAEADESDGSFLSYSPSVAVVTNV 188
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVV 318
+ +H+D +A ++F +F ++I GG LV+C D + A +L D + GV
Sbjct: 189 EPDHLDHHGTAEAYTAVFTQFTRRIEPGGLLVVCADDEAANALGDHAA-------AAGVR 241
Query: 319 SNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPG 378
+ D K++ Y P GG I + + + +PG
Sbjct: 242 VRRYGRSVTDPGDAKVLDY-------------RPADGGGVIRIALDGAE--TDVRVAVPG 286
Query: 379 VHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDF 438
H N++A + L L + L L+ F GV RRF+ G +YDD+
Sbjct: 287 EHMAFNAVAALLAGLEL-------GAPLDGLAEGLAAFGGVRRRFEFKGRAGDVRVYDDY 339
Query: 439 AHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
AHHPTEV A L+A R N ++ VFQPH YSR + +FA AL AD+VV+
Sbjct: 340 AHHPTEVAAQLRAVRHAAGNGRVVVVFQPHLYSRTKLFAAEFAEALGLADEVVL 393
>gi|402819606|ref|ZP_10869174.1| murC protein [alpha proteobacterium IMCC14465]
gi|402511753|gb|EJW22014.1| murC protein [alpha proteobacterium IMCC14465]
Length = 463
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 143/414 (34%), Positives = 220/414 (53%), Gaps = 48/414 (11%)
Query: 92 AKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIP 151
A++ G++V GSD+ ++ + L + G + GH SN+ + +V SSAI
Sbjct: 12 AEIMHNLGYQVQGSDVSENANVRRLSDMGIKIFKGHDASNMAN------VSLLVISSAIK 65
Query: 152 QD-NVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDL 210
D N E+L AK G+P+ +R LA+L + V+G+HGK+TT SM+A VL D
Sbjct: 66 TDENPEVLAAKKGGIPVIRRSEMLAELMRLKYCLTVAGTHGKTTTTSMVAAVLDDAALDP 125
Query: 211 TAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDED 270
T I G + + + G G V+EADE DG F+ L ++ +VTN+D EH+D + D
Sbjct: 126 TVINGGVINAYGTNARL-GSGDWIVVEADESDGTFVRLPSTIGIVTNIDPEHLDYYGSFD 184
Query: 271 AVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGH 330
++ F R+++ I G ++C DSQ ++L+ +I
Sbjct: 185 GLRDAFARYVENIPFYGAALMCIDSQEVQNLMGRIS------------------------ 220
Query: 331 DYKIITYGFSSFNDWYAESVCPNVQGGS-DYILCER----GRPLAQISLQIPGVHNVLNS 385
D +II+YG S D A ++ + Q S D ++ +R R + +L +PG HN+ N+
Sbjct: 221 DRRIISYGLSPQADIRAVNISVDGQKTSFDVVISDRRNNEARDIEGFTLPMPGQHNLQNA 280
Query: 386 LAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTE 444
LA IA L L + D++ +K L++F GV RRF L GT G +YDD+AHHP E
Sbjct: 281 LAAIAAGLQLGVADEK--------IKQALAEFGGVKRRFTLTGTWQGVEVYDDYAHHPVE 332
Query: 445 VRAVLQAARQRFPNKA--LIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAVL 496
+ AVL++AR K ++AV QPH Y+RL L +DF A ++AD V+V+ V
Sbjct: 333 INAVLESARAAATAKGGKVMAVVQPHRYTRLRDLFEDFCTAFNDADSVIVAPVF 386
>gi|387770992|ref|ZP_10127164.1| UDP-N-acetylmuramate--L-alanine ligase [Pasteurella bettyae CCUG
2042]
gi|386902911|gb|EIJ67732.1| UDP-N-acetylmuramate--L-alanine ligase [Pasteurella bettyae CCUG
2042]
Length = 478
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 147/438 (33%), Positives = 220/438 (50%), Gaps = 47/438 (10%)
Query: 61 FKRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAG 120
F+ I+ R IHF+GIGG+G+S +A++ L +G+++SGSD+ + + +AG
Sbjct: 4 FQETVRKIIPEMRRVKQIHFIGIGGAGMSGIAEILLNEGYQISGSDISDGLVTQRIAQAG 63
Query: 121 ANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEK 180
A + IGH N+ G + VV SSAI QDN E++ AK +P+ +R LA+L
Sbjct: 64 AKIFIGHQAENVNG------ASVVVVSSAIHQDNPELVAAKENRIPVIQRAQMLAELMRF 117
Query: 181 YNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADE 240
+ IAV+G+HGK+TT +M++ V G D T + G V + G + + EADE
Sbjct: 118 RHGIAVAGTHGKTTTTAMISMVYAQAGLDPTFVNGGLVKSVGTNA-HLGASRYLIAEADE 176
Query: 241 YDGCFLGLSPSVAVVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCAR 299
D FL L P V+VVTN++ +H+D + + +K + FL + G VIC D
Sbjct: 177 SDASFLHLQPMVSVVTNIEPDHMDTYHGSFEEMKQTYVNFLHNLPFYGLAVICADDPVLA 236
Query: 300 SLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPN-VQGGS 358
L+ QI + +ITYGF+ D+ E+ QG
Sbjct: 237 ELMPQIGR-------------------------PVITYGFAENADYRIENYQQTGFQG-- 269
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
Y + + L +PG HN LN+ A +A K + + A L L+ F G
Sbjct: 270 QYTVITPSNERIDVLLNVPGKHNALNATAALAVA------KEEGIRNEAILA-ALADFQG 322
Query: 419 VSRRFDLIGTI-YGC---HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
RRFD +G C + DD+ HHPTEV +QAARQ + NK ++ +FQPH Y+R
Sbjct: 323 AGRRFDQLGVFSRSCGKVMLVDDYGHHPTEVNVTIQAARQGWENKRIVMIFQPHRYTRTR 382
Query: 475 VLKDDFANALSEADQVVV 492
L DDF LS+ D +++
Sbjct: 383 DLFDDFVQVLSQVDALIM 400
>gi|332288551|ref|YP_004419403.1| UDP-N-acetylmuramate--L-alanine ligase [Gallibacterium anatis
UMN179]
gi|330431447|gb|AEC16506.1| UDP-N-acetylmuramate-L-alanine ligase [Gallibacterium anatis
UMN179]
Length = 480
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 141/446 (31%), Positives = 220/446 (49%), Gaps = 61/446 (13%)
Query: 60 TFKRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEA 119
F+ +V R IHFVGIGG+G+S +A++ L +G++++GSD+ ++ L E
Sbjct: 8 NFQHQVRMVVPEMRRVKQIHFVGIGGAGMSGIAEVLLNEGYQITGSDIQENAVTLQLAEM 67
Query: 120 GANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE 179
GA + + HS NI G + VV SSAI DN E++ A+ +P+ +R LA++
Sbjct: 68 GAKIFLQHSADNIAG------ASVVVVSSAIKPDNPEVIAAREARIPVIQRAQMLAEIMR 121
Query: 180 KYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN------ 233
+ IAV+G+HGK+TT +M+A + D P F +G + G N
Sbjct: 122 FRHGIAVAGTHGKTTTTAMIAMIYAQAKLD---------PTFVNGGLVKSAGTNAHLGLS 172
Query: 234 --FVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLV 290
+ EADE D FL L P VAVVTN++ +H+D + + +K + FL + G V
Sbjct: 173 RYLIAEADESDASFLHLQPMVAVVTNIEPDHMDTYHGNFEEMKQTYINFLHNLPFYGLAV 232
Query: 291 ICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESV 350
+C D ++LL ++ + ++ITYGFS D+ E
Sbjct: 233 LCADDPVLQTLLPKVGR-------------------------QVITYGFSDKADYRIEDY 267
Query: 351 CPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLK 410
G ++C G+ + +I L +PG H + L + ++ ESI
Sbjct: 268 SQTGFQGHYTVICPDGQRM-EILLNVPGKH----NALNATAALAVAKEEGIDDESILA-- 320
Query: 411 LPLSKFMGVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQ 466
L+ F G RRFD +G+ + + DD+ HHPTEV +QAAR + NK ++ +FQ
Sbjct: 321 -ALADFQGAGRRFDQLGSFIRPNGKVMLIDDYGHHPTEVNVTIQAARHGWENKRIVMIFQ 379
Query: 467 PHTYSRLVVLKDDFANALSEADQVVV 492
PH YSR L DDF LS+ D +++
Sbjct: 380 PHRYSRTRDLFDDFVQVLSQVDVLIM 405
>gi|375136420|ref|YP_004997070.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter calcoaceticus
PHEA-2]
gi|427426398|ref|ZP_18916456.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
WC-136]
gi|325123865|gb|ADY83388.1| UDP-N-acetylmuramate--alanine ligase [Acinetobacter calcoaceticus
PHEA-2]
gi|425696859|gb|EKU66557.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
WC-136]
Length = 482
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 150/429 (34%), Positives = 221/429 (51%), Gaps = 49/429 (11%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG+G+ +A++ QG+++SGSD+ S E L + G ++IGH NI+
Sbjct: 21 RIKHIHFVGIGGAGMCGIAEVLGNQGYKISGSDIKASKTTEQLEKNGIKVYIGHQPENIK 80
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
N +V S+AI +N EI A VPI +R L +L + IAV+G+HGK+
Sbjct: 81 N------ANVLVVSTAIDPENPEIKAAIEQRVPIVRRAEMLGELMRYRHGIAVAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S+L +L D T ++G + + G + V EADE D FL L P A
Sbjct: 135 TTTSLLTTMLAEENLDPTYVIGGLLNSTGVNAAL-GESRFIVAEADESDASFLYLQPMAA 193
Query: 254 VVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
+VTN+D +H+D +E D +K F +FL + G V+CGD R +L ++ +
Sbjct: 194 IVTNIDADHMDTYEGSFDKLKDTFVQFLHNLPFYGLAVVCGDDANIREILPRVGR----- 248
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLA 370
+ITYGF+ ND A + Q G S + + +GR
Sbjct: 249 --------------------PVITYGFNEDNDIRAVDIE---QDGMQSHFTVLRKGREPL 285
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
++++ PG+HNVLN+LA I D+ S ++I+ L F GV RRF + G
Sbjct: 286 RLTINQPGLHNVLNALAAIGVAT----DEGVSDDAIS---RALEGFSGVGRRFQVQGEFE 338
Query: 431 ----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
+ DD+ HHP EV A ++AARQ P++ L+ +FQPH YSR DDF LS+
Sbjct: 339 LADGNVKLVDDYGHHPKEVEATIKAARQSHPDRRLVMLFQPHRYSRTRDCFDDFIEVLSQ 398
Query: 487 ADQVVVSAV 495
DQ+++ V
Sbjct: 399 VDQLLLLEV 407
>gi|330501925|ref|YP_004378794.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas mendocina
NK-01]
gi|328916211|gb|AEB57042.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas mendocina
NK-01]
Length = 480
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 153/426 (35%), Positives = 212/426 (49%), Gaps = 53/426 (12%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
HFVGIGG G+ +A++ L G+EVSGSDL S+ E L GA + IGH N + D
Sbjct: 22 HFVGIGGVGMCGIAEVLLNLGYEVSGSDLKASAVTERLENFGATIFIGHRAENAEQAD-- 79
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
+V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+TT S+
Sbjct: 80 ----VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTSL 135
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
LA V A G D T ++G + + G + + EADE D FL L P V+VVTN+
Sbjct: 136 LASVFAAGGLDPTFVIGGRL-NAAGTNAQLGSSRFLIAEADESDASFLHLQPMVSVVTNI 194
Query: 259 DWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
D +H+ + D + +K F FL + G V+C D R LL Q+ + T
Sbjct: 195 DADHMSTYGGDFNKLKKTFIEFLHNLPFYGLAVLCVDDPVVRELLPQVGRPT-------- 246
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERG--RPLAQISLQ 375
+TYGFS D A +V +G Y R PL +S+
Sbjct: 247 -----------------VTYGFSEDADVRAINV--RQEGMRTYFTVLRPDCEPL-DVSVN 286
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESI--ACLKLPLSKFMGVSRRFDLIGTIY--- 430
+PG HNVLN+LA A + E I A + LS F GV RRF + G +
Sbjct: 287 MPGNHNVLNALATTAIA---------TDEGIDDAAIVSGLSGFQGVGRRFQVYGELPVDG 337
Query: 431 -GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
+ DD+ HHP EV AV++A R +P + L+ V+QPH YSR L DDF L EA+
Sbjct: 338 GSVMLVDDYGHHPREVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVQVLGEANV 397
Query: 490 VVVSAV 495
+++ V
Sbjct: 398 LLLVEV 403
>gi|110833460|ref|YP_692319.1| UDP-N-acetylmuramate--L-alanine ligase [Alcanivorax borkumensis
SK2]
gi|123345752|sp|Q0VS01.1|MURC_ALCBS RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|110646571|emb|CAL16047.1| UDP-N-acetylmuramate--L-alanine ligase [Alcanivorax borkumensis
SK2]
Length = 474
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 143/416 (34%), Positives = 210/416 (50%), Gaps = 45/416 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ QG+ +SGSD+ S +E L G + IGH NI G D
Sbjct: 19 IHFVGIGGVGMCGIAEVLANQGYAISGSDIKESPVLERLRSLGVRVDIGHRAENIDGAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV S+A+ +N+E+ A +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 78 -----VVVTSTAVNTENLEVAAAHERRIPVVPRAQMLAELMRFRHGIAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+ A ++ G D T ++G + + G + V EADE D FL L P A+VTN
Sbjct: 133 LTAAIMAEAGLDPTFVIGGRLNSAGTNARL-GQSRYLVAEADESDASFLHLQPMSAIVTN 191
Query: 258 LDWEHVDIFEDEDA-VKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ + + A +++ F FL + G V+C D R LL ++ +
Sbjct: 192 VDADHMHTYGGDFAQLENTFIEFLHNLPFYGVAVMCVDDPVVRKLLPRVNR--------- 242
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++I YGFS D AE+V + ++ G PL +SL +
Sbjct: 243 ----------------QVIRYGFSEDADLRAENVRQDGMVTHFRVVRAEGEPL-DVSLNM 285
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----GC 432
PG HNVLN+LA IA + D+ E+I L+ F GV RRFD+ G +
Sbjct: 286 PGRHNVLNALAAIA----VSADEGAGDEAII---RGLNNFTGVGRRFDVQGDYHFDGGSA 338
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
+ DD+ HHP EV A + A R+ +P + L +FQPH Y+R L +DF LS D
Sbjct: 339 TLVDDYGHHPREVAATIDAIREGWPGRRLAMLFQPHRYTRTQDLYEDFVEVLSGVD 394
>gi|110802264|ref|YP_699749.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium perfringens
SM101]
gi|123047139|sp|Q0SQ58.1|MURC_CLOPS RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|110682765|gb|ABG86135.1| UDP-N-acetylmuramate--alanine ligase [Clostridium perfringens
SM101]
Length = 457
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 138/426 (32%), Positives = 223/426 (52%), Gaps = 48/426 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K+ +HF+GIGG +S LA + L G++VSGSD S L E GA ++IGHS
Sbjct: 6 LKDINKKVHFIGIGGVSMSGLAAVLLNAGYKVSGSDSKESEITNRLKEEGAKIYIGHSKD 65
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAVSG 188
N+Q D VV ++AIP DN EI+ AK + + R +L ++ + K+N +AV+G
Sbjct: 66 NLQDVD------VVVYTAAIPSDNPEIIKAKEDNLILMDRAEFLGQIMKGHKFN-VAVAG 118
Query: 189 SHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGL 248
+HGK+TT SM+++V + D T +VG + G+ G + F+ EA EY FL
Sbjct: 119 THGKTTTTSMISHVALSADLDPTILVGGDL-DIIHGNFRVGNSEYFITEACEYKQSFLRF 177
Query: 249 SPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQD 308
P V ++ N+D +H+D ++D + +K F++F+K I G+++ D + +L+ K +
Sbjct: 178 FPYVGIILNIDADHLDFYKDINHIKDTFKQFVKLIPNDGYIIGNADDKKVMEVLEVAKCN 237
Query: 309 TGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP 368
++TYG ++ D A ++ N +G + + +
Sbjct: 238 -------------------------VLTYGINN-GDIQARNIEFNEKGCATFDVFRNEEK 271
Query: 369 LAQISLQIPGVHNVLNSLAVI--ATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
L +SL +PG+HNV NSL+ + A + + D S LS F G +RF+
Sbjct: 272 LLSLSLNVPGMHNVSNSLSAVCLAEIFNINADAIVS---------GLSSFGGAHKRFEYK 322
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
GT + DD+AHHP E++A L A++ NK ++ VFQPHTY+R L +DF +
Sbjct: 323 GTKNDITVIDDYAHHPVEIKATLSTAKKMNHNK-IVCVFQPHTYTRTKTLFNDFVKCFDD 381
Query: 487 ADQVVV 492
D++V+
Sbjct: 382 CDELVL 387
>gi|332981585|ref|YP_004463026.1| UDP-N-acetylmuramate--L-alanine ligase [Mahella australiensis 50-1
BON]
gi|332699263|gb|AEE96204.1| UDP-N-acetylmuramate--L-alanine ligase [Mahella australiensis 50-1
BON]
Length = 469
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 142/420 (33%), Positives = 224/420 (53%), Gaps = 42/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG +S LA++ L+QG V+GSD+ S+ L ++GA ++IGH N++G D
Sbjct: 14 IHFIGIGGISMSGLAQILLRQGCIVTGSDVKASTLTRKLSDSGATVYIGHKADNVKGAD- 72
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTTA 196
VV ++AI DN E+ A +G+P R +L ++ + Y IAV+G+HGK+TT
Sbjct: 73 -----LVVYTAAIHNDNPELNEANGLGIPTVDRATFLGQIMKNYGKGIAVAGTHGKTTTT 127
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
S+++ +L+ G D T +VG + G++ G + FV EA EY FL P +AV+
Sbjct: 128 SIISIILQNAGLDPTVLVGGELDAIG-GNVRVGESQYFVTEACEYVESFLKFYPYIAVIL 186
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F+D D + + F F K G++V C D LL +
Sbjct: 187 NIERDHLDYFKDLDDIYNAFLSFAKLTPDDGYVVGCIDDPLVEQLLSDMPD--------- 237
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
K I+YG W A+ + + +G + + G + + SL I
Sbjct: 238 ----------------KAISYGIDKPAHWTADDIAFDKKGFPSFNIYCDGLNMGRFSLSI 281
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI-YGCHIY 435
PG HN+ N+LA +A V L G I +K L + G RRF++ G + G +
Sbjct: 282 PGRHNIYNALASVA-VADLCG------IDIEMIKESLRLYKGAHRRFEVKGRLEEGVTVI 334
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHPTE++A +QAA +P+ + VFQPHTY+R +L D+FA+A D ++++ +
Sbjct: 335 DDYAHHPTEIKATIQAALN-YPHNHIWCVFQPHTYTRTRLLLDEFASAFYGIDHLIITDI 393
>gi|51473445|ref|YP_067202.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia typhi str.
Wilmington]
gi|383752219|ref|YP_005427319.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia typhi str.
TH1527]
gi|383843055|ref|YP_005423558.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia typhi str.
B9991CWPP]
gi|59798218|sp|Q68XC2.1|MURC_RICTY RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|51459757|gb|AAU03720.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia typhi str.
Wilmington]
gi|380758862|gb|AFE54097.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia typhi str.
TH1527]
gi|380759702|gb|AFE54936.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia typhi str.
B9991CWPP]
Length = 498
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 144/429 (33%), Positives = 219/429 (51%), Gaps = 48/429 (11%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHF+GIGG G+S +A++ G++V GSDLV + + L G + +GH+ NI+
Sbjct: 14 GTIHFIGIGGVGMSGIAEILHNLGYKVQGSDLVENYNTKRLESYGIKIFLGHAKQNIKN- 72
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
+ VV SSAI Q+N EI A +PI +R LA+L +AVSGSHGK+TT
Sbjct: 73 -----VSYVVISSAIHQNNPEIKEALERKIPIIRRAEMLAELMRLKCSVAVSGSHGKTTT 127
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAV 254
S++A + +A G T I G + + Y G N+++ EADE D F+ + ++A+
Sbjct: 128 TSLIACLFEAAGLYPTVINGGIINNKSTNA--YLGSSNYLIAEADESDATFIHIPSTIAI 185
Query: 255 VTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY- 313
+TN+D EH+D ++D + + FR F+ + G V C D + R L+D I + + Y
Sbjct: 186 ITNIDPEHLDYYQDFEILIGAFRSFITNLPFYGFAVCCIDHKIVRKLVDDITERKIITYG 245
Query: 314 -----SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP 368
+ + N ++D+ D KI PNV G +
Sbjct: 246 IDAEDAHIIAFNINTDIASSTFDVKI---------------SLPNVLGTT---------I 281
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
+ +I++ PG HN+LNSLA IA + L I +K + F GV RRF +
Sbjct: 282 IEKITIPTPGRHNILNSLAAIAVGIEL-------DFGIKAIKNGFNNFKGVKRRFTKVAE 334
Query: 429 IYGCHIYDDFAHHPTEVRAVLQAARQ--RFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
I DD+AHHP E++A L A+ N +IA+FQPH YSR+ L DDF ++
Sbjct: 335 YNQAVIIDDYAHHPEEIKATLATAKNIANQQNGKVIAIFQPHRYSRIKYLFDDFMLCFAD 394
Query: 487 ADQVVVSAV 495
AD + ++ +
Sbjct: 395 ADILYITNI 403
>gi|452749593|ref|ZP_21949353.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas stutzeri NF13]
gi|452006525|gb|EMD98797.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas stutzeri NF13]
Length = 471
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 153/425 (36%), Positives = 216/425 (50%), Gaps = 49/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G+EVSGSDL S+ L GA + IGH N+ G D
Sbjct: 7 IHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKESASTVRLQSFGAQIFIGHQAGNVAGAD- 65
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 66 -----VLVVSSAVNSANPEVALALEQRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTS 120
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+LA V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 121 LLASVFAAGGLDPTFVIGGRLTAAGTNAQL-GSSRYLIAEADESDASFLHLQPMVAVVTN 179
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ + D +K F FL + G V+C D R ++ QI +
Sbjct: 180 IDADHMSTYGGDFGKLKKTFVEFLHNLPFYGLAVLCVDDPFVREIIPQIGR--------- 230
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDY--ILCERGRPLAQISL 374
I TYGFS D A +V QG + +L + PL +S+
Sbjct: 231 ----------------PITTYGFSEDADVRATNV--RQQGMRTFFTVLRDGCEPL-DVSV 271
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY---- 430
+PG HNVLN+LA IA + D+ E+I L++F GV RRF + G +
Sbjct: 272 NMPGNHNVLNALATIA----IATDEGIDDEAIVQ---GLAEFAGVGRRFQVYGDLPVEDG 324
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP EV AV++A R +P + L+ V+QPH YSR L DDF L E++ +
Sbjct: 325 SVMLVDDYGHHPREVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVQVLGESNVL 384
Query: 491 VVSAV 495
++ V
Sbjct: 385 LLMEV 389
>gi|402310183|ref|ZP_10829151.1| UDP-N-acetylmuramate--L-alanine ligase [Eubacterium sp. AS15]
gi|400369425|gb|EJP22425.1| UDP-N-acetylmuramate--L-alanine ligase [Eubacterium sp. AS15]
Length = 452
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 131/424 (30%), Positives = 216/424 (50%), Gaps = 48/424 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
I F+GIGG +S LA + G+EV GSD S+ + L G ++IGH+ +I +
Sbjct: 3 IFFIGIGGISMSGLAMICKNLGWEVIGSDREDSNVIHQLERKGIKVYIGHNKDHITSD-- 60
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKSTTA 196
+ VV ++A+ QDN EI+ K +G+ + +R +L + ++Y N IA++G+HGK+TT
Sbjct: 61 ---IDKVVFTAAVKQDNEEIIKTKELGIDLVERSVFLGSIMKEYENSIAIAGTHGKTTTT 117
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM+ + + T+++G G++ G F+ EA EY FL P VAV+T
Sbjct: 118 SMITLIFDKAEKNPTSLIGGMFKNIG-GNVEIGNSDIFISEACEYVDSFLQFYPKVAVIT 176
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D FED +KS F +F Q++ GG ++ GD R L K+D + Y G
Sbjct: 177 NIEEDHLDYFEDLSQIKSSFLKFANQVKEGGFVIANGDDDNVRDTLKDCKKD--VYYYG- 233
Query: 317 VVSNQSSDLWGQGHDY-----KIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQ 371
+ +G+D+ + +G+ +F+ +YA G +
Sbjct: 234 ---------FNEGNDFIIDNLEFDNFGYPTFDVFYAND----------------GVLIDN 268
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG 431
L + G HNV N+ + I + L +K +K + KF GV RRF+ IG G
Sbjct: 269 YKLNVFGKHNVYNATSAIVSACMLDIEKED-------IKNAIEKFTGVGRRFEYIGEKDG 321
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
++DD+AHHPTE+++ L A + N+ ++FQPHTY+R L +F + D +
Sbjct: 322 VRVFDDYAHHPTEIKSTLDAIKSLKKNR-FFSIFQPHTYTRTKALFKEFVECFDDTDIAI 380
Query: 492 VSAV 495
+ +
Sbjct: 381 FADI 384
>gi|344923569|ref|ZP_08777030.1| UDP-N-acetylmuramate--L-alanine ligase [Candidatus Odyssella
thessalonicensis L13]
Length = 493
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 149/434 (34%), Positives = 231/434 (53%), Gaps = 55/434 (12%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HFVGIGG G+S +A++ + G+EV+GSD+ + ++ L GA + IGH+ N+ G
Sbjct: 11 LHFVGIGGIGMSGIAEVLVNLGYEVTGSDVSENPNVQRLRSLGARIQIGHAAENVVGA-- 68
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV S+A+ DN E++ A+ + +P+ +R LA+L +A+ G+HGK+TT S
Sbjct: 69 ----QVVVVSTAVKADNPEVMEARRLRIPVIRRAEMLAELMHLKQSVAICGTHGKTTTTS 124
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M A + A G D T I G + + + G G+ V+EADE DG FL L ++AVVTN
Sbjct: 125 MTAALFDAAGLDPTVINGGIINSYGTNARL-GAGEWIVVEADESDGSFLRLPATIAVVTN 183
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D EH+D + D D++++ F F+++I G V+C D RS++ +I
Sbjct: 184 IDSEHMDFYADFDSLRNAFVTFIERIPFYGLGVLCVDHPVVRSMVPEI------------ 231
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG--------GSDYILCERG--- 366
+D ++ITYG+S + A ++ +G ++ ++ +
Sbjct: 232 ------------NDRRLITYGYSEDANVRAVNLRETAEGILFDVDIVANNLLITQTSNSK 279
Query: 367 -----RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSR 421
R + I L + G HNV NSLAV+A L D ++ A F GV R
Sbjct: 280 IHALPRRIKDIFLPMVGRHNVQNSLAVVAIAQELGVDDDAVRQAFA-------GFKGVKR 332
Query: 422 RFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFA 481
RF +G +G + DD+AHHP E+ VL+A RQ K +IAV QPH YSRL L DDF
Sbjct: 333 RFTRVGVSHGVTVIDDYAHHPVEINTVLEAGRQACRGK-IIAVMQPHRYSRLKHLFDDFT 391
Query: 482 NALSEADQVVVSAV 495
+ AD++++S+V
Sbjct: 392 ACFNHADKIIISSV 405
>gi|209696051|ref|YP_002263981.1| UDP-N-acetylmuramate--L-alanine ligase [Aliivibrio salmonicida
LFI1238]
gi|226706336|sp|B6ELH4.1|MURC_ALISL RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|208010004|emb|CAQ80327.1| UDP-N-acetylmuramate--L-alanine ligase [Aliivibrio salmonicida
LFI1238]
Length = 487
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 147/433 (33%), Positives = 214/433 (49%), Gaps = 63/433 (14%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG+G+S +A++ L +G+ +SGSD+ +S L E GA++ GH SN++
Sbjct: 21 RVECIHFVGIGGAGMSGIAEVLLNEGYHISGSDVAENSVTVRLAEKGADIFFGHHASNVE 80
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
+ VV S+AI Q N EI+ AK +P+ +R LA+L + IAV+G+HGK+
Sbjct: 81 K------ASVVVVSTAIDQANPEIVAAKENRIPVIRRAEMLAELMRYRHGIAVAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEADEYDGCF 245
TT ++ + G D P F +G + G N + EADE D F
Sbjct: 135 TTTALTTQIYSEAGLD---------PTFVNGGLVKNAGTNARLGSSRFLIAEADESDASF 185
Query: 246 LGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 304
L L P V++VTN++ +H+D + D + +K F FL + G V+C D R LL +
Sbjct: 186 LHLQPMVSIVTNIEADHMDTYGGDFEVLKQTFIDFLHNLPFYGQAVMCIDDDVVRELLPR 245
Query: 305 IKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE 364
+ + ++ITYGFS +D + +G + +
Sbjct: 246 VSR-------------------------QVITYGFS--DDADVRLINYRQEGQKSFFTVQ 278
Query: 365 R-GRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRF 423
R R I L IPG HN LN+ A IA + E A L L F G RRF
Sbjct: 279 RKDRTDLDIVLNIPGKHNALNATAAIAVA------TEEDVEDSAILS-ALLNFEGAGRRF 331
Query: 424 DLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDD 479
D +G + + DD+ HHPTEV ++AAR + +K L+ +FQPH YSR L DD
Sbjct: 332 DQLGEFETGNGHAMLVDDYGHHPTEVDVTIKAARAGWEDKRLVMIFQPHRYSRTRDLYDD 391
Query: 480 FANALSEADQVVV 492
FAN L D +++
Sbjct: 392 FANVLDNVDVLIM 404
>gi|303251841|ref|ZP_07338012.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307249142|ref|ZP_07531149.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|302649271|gb|EFL79456.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|306854430|gb|EFM86626.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
Length = 475
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 146/475 (30%), Positives = 234/475 (49%), Gaps = 72/475 (15%)
Query: 60 TFKRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEA 119
F+ + +V R IHF+GIGG+G+S +A++ L +G+++SGSD+ + L EA
Sbjct: 3 NFQDKIKKLVPEMRRVNQIHFIGIGGAGMSGIAEVLLNEGYQISGSDIAEGPVTKRLAEA 62
Query: 120 GANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE 179
GA + IGH N+ G + VVASSAI N E+ AK +P+ +R LA++
Sbjct: 63 GAKVFIGHQAENVAG------ASVVVASSAIDDSNPEVRAAKEARIPVIQRAQMLAEIMR 116
Query: 180 KYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN------ 233
+ IAV+G+HGK+TT +M++ + D P F +G + GKN
Sbjct: 117 FRHGIAVAGTHGKTTTTAMISMIYTEAKLD---------PTFVNGGLVKSAGKNAHLGAS 167
Query: 234 --FVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLV 290
+ EADE D FL L P V+VVTN++ +H+D + D + +++ + +FL+ + G V
Sbjct: 168 RYLIAEADESDASFLHLQPMVSVVTNIEPDHMDTYGGDFEQMRATYVKFLRNLPFYGLAV 227
Query: 291 ICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESV 350
+C D + + Q+ + +++TYGFS D+ E
Sbjct: 228 MCADDETVIEIAPQVGR-------------------------QVLTYGFSEKADYRIEDY 262
Query: 351 CPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIA--C 408
G ++C G + + L +PG HN LN+ A +A E IA
Sbjct: 263 QQTGFQGHYTVVCPNGERI-DVLLNVPGKHNALNATAALAVA---------KEEGIANEA 312
Query: 409 LKLPLSKFMGVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAV 464
+ L+ F G RRFD +G+ + + DD+ HHPTEV ++AAR + NK ++ +
Sbjct: 313 ILAALADFQGAGRRFDQLGSFIRPNGKVMLVDDYGHHPTEVDVTIKAARSGWENKRVVMI 372
Query: 465 FQPHTYSRLVVLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
FQPH YSR L DDF LS+ D +++ L ++A ++ A + +C
Sbjct: 373 FQPHRYSRTRDLFDDFVQVLSQVDALIM-------LEVYAAGEAPIVGADSKALC 420
>gi|342215695|ref|ZP_08708342.1| UDP-N-acetylmuramate--L-alanine ligase [Peptoniphilus sp. oral
taxon 375 str. F0436]
gi|341586585|gb|EGS29985.1| UDP-N-acetylmuramate--L-alanine ligase [Peptoniphilus sp. oral
taxon 375 str. F0436]
Length = 459
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 141/453 (31%), Positives = 231/453 (50%), Gaps = 48/453 (10%)
Query: 70 DFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSV 129
DFKN K +HF+GIGG +S LA++ F VSGSD+ S + L E G + IGHS
Sbjct: 5 DFKNNKRHVHFIGIGGISMSGLAEILHHNHFTVSGSDMKESKITQHLREIGIPVKIGHSK 64
Query: 130 SNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSG 188
NIQG D ++ + AI DN E+ A V + R +L L + Y IAVSG
Sbjct: 65 ENIQGAD------VIIFTDAINLDNEELRGAIEAKVDLIDRASFLGMLMKNYKKSIAVSG 118
Query: 189 SHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGL 248
+HGK+TT SM++ ++ + +D T ++G + + G++ +G F+ EA EY +
Sbjct: 119 THGKTTTTSMISCMICNLKEDPTILLGGELDEIK-GNVRFGERDLFLTEACEYKANIVKY 177
Query: 249 SPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQD 308
P+ A++ N+D +H+D F++ D + F + + I GHL++ D+ + L+ ++K
Sbjct: 178 FPTTAIILNMDEDHLDYFDNMDHIYRTFLEYAQNIPPEGHLILNIDNDYVKKLIPEVKA- 236
Query: 309 TGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP 368
++T+ D+ A+++ + G + + L G
Sbjct: 237 ------------------------HVVTFSVQQEADYQAKNIRFSESGLASFDLYYHGDF 272
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLP---LSKFMGVSRRFDL 425
+ I L++ G+HN+ N+LA IA+V HE+ L L + GV RR +
Sbjct: 273 IRPIHLKVMGLHNIYNALASIASV----------HENGLDFDLAIQGLESYGGVHRRLEY 322
Query: 426 IGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
G+ + DD+AHHPTE+++ L A RQ K + VFQPHT++R +L D FA++
Sbjct: 323 KGSKDRISVIDDYAHHPTEIQSTLHALRQAAQGK-IYCVFQPHTFTRTKLLLDGFAHSFH 381
Query: 486 EADQVVVSAVLVFWLIIFA-VSSFWLIMAINSV 517
EAD V+++ + + + S L+ AIN +
Sbjct: 382 EADSVIITDIYAAREKDYGDIHSKTLVDAINKI 414
>gi|441211479|ref|ZP_20975108.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium smegmatis MKD8]
gi|440626332|gb|ELQ88163.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium smegmatis MKD8]
Length = 482
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 155/422 (36%), Positives = 222/422 (52%), Gaps = 42/422 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H VGIGG+G+S +A++ L +G VSGSD S + L GA + IGH S++ G
Sbjct: 13 VHMVGIGGAGMSGVARILLDRGGLVSGSDAKESRGVVALRARGAEIRIGHDASSLDLLPG 72
Query: 138 SRFPNAVVAS-SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
P AVV + +AIP+ N E++ A+ G+P+ R LAKL Y + V+G+HGK+TT
Sbjct: 73 G--PTAVVTTHAAIPKTNPELVEARKRGIPVILRPVVLAKLMTGYTTLMVTGTHGKTTTT 130
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SML L+ G D + VG + + + +G G FV EADE DG L +P+VAVVT
Sbjct: 131 SMLIVALQHSGFDPSFAVGGELGEAGTNA-HHGSGTTFVAEADESDGSLLEYTPNVAVVT 189
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F E A ++F F+++I GG LV+C D A +L D+
Sbjct: 190 NIEADHLDFFGSEQAYTAVFDSFVERIAPGGALVVCTDDPGAAALADR------------ 237
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYI----LCERGRPLAQI 372
+D G +++ YG S D A ++ Q G+ + L P A +
Sbjct: 238 ------TDALG----IRVLRYG--STGDNLAGTLLSWEQQGTGAVAHIRLAGEHNPRA-V 284
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC 432
L +PG H + L + R+ I + L+ F GV RRF+L+GT G
Sbjct: 285 RLSVPGRH-------MALNALAALLAAREIGAPIDSVLDGLAGFEGVRRRFELVGTAAGA 337
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKA--LIAVFQPHTYSRLVVLKDDFANALSEADQV 490
++DD+AHHPTEVRA L+AAR ++ FQPH YSR +F ALS ADQV
Sbjct: 338 RVFDDYAHHPTEVRATLEAARAVVDQNGGRVVVAFQPHLYSRTATFAHEFGAALSVADQV 397
Query: 491 VV 492
VV
Sbjct: 398 VV 399
>gi|441503430|ref|ZP_20985436.1| UDP-N-acetylmuramate--alanine ligase [Photobacterium sp. AK15]
gi|441428928|gb|ELR66384.1| UDP-N-acetylmuramate--alanine ligase [Photobacterium sp. AK15]
Length = 486
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 145/446 (32%), Positives = 229/446 (51%), Gaps = 48/446 (10%)
Query: 53 VSVLTNCTFKRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSY 112
+S L N + + + + R IHFVGIGG+G+S +A++ + +G+ +SGSDL ++
Sbjct: 1 MSKLDNQQLAKIRTMVPEMR-RVERIHFVGIGGAGMSGIAEVLINEGYRISGSDLAPNAV 59
Query: 113 MEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDY 172
E L GA++ GH+ N++G + VV S+AI +N E+L A+ + +P+ +R
Sbjct: 60 TERLTAKGADIFFGHAEDNVRG------ASVVVVSTAIAAENPELLAARELRIPVVRRAE 113
Query: 173 WLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGK 232
LA+L + IA++G+HGK+TT +++ + D T + G V + G +
Sbjct: 114 MLAELMRYRHGIAIAGTHGKTTTTALVTQIYSEADLDPTFVNGGLVKSAGTNARL-GSSR 172
Query: 233 NFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVI 291
+ EADE D FL L P V VVTN++ +H++ + D + +K F FL + G V+
Sbjct: 173 YLIAEADESDASFLHLQPMVCVVTNIEADHMETYGGDFEVLKQTFIDFLHNLPFYGLAVM 232
Query: 292 CGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVC 351
C D R LL QI + ++ITYGFS D V
Sbjct: 233 CIDDPVIRELLPQIGR-------------------------QVITYGFSE--DADVRLVD 265
Query: 352 PNVQGGSDYI-LCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLK 410
+ +G Y + +G+P ++ L IPG HN LN+ A +A + E A ++
Sbjct: 266 YDQRGQQGYFSILRKGKPALKVKLNIPGRHNALNATAAVAVATE------EGVEDEAIIR 319
Query: 411 LPLSKFMGVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQ 466
L++F G RRFD +G + + DD+ HHP+EV ++AAR + K L+ VFQ
Sbjct: 320 -ALAEFEGTGRRFDHLGEYETGNGKVMLVDDYGHHPSEVDVTIKAARAGWEEKRLVMVFQ 378
Query: 467 PHTYSRLVVLKDDFANALSEADQVVV 492
PH YSR L +DFAN L + D +V+
Sbjct: 379 PHRYSRTRDLYEDFANVLEQVDVLVM 404
>gi|333368165|ref|ZP_08460379.1| UDP-N-acetylmuramate--L-alanine ligase [Psychrobacter sp.
1501(2011)]
gi|332977769|gb|EGK14529.1| UDP-N-acetylmuramate--L-alanine ligase [Psychrobacter sp.
1501(2011)]
Length = 476
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 145/426 (34%), Positives = 225/426 (52%), Gaps = 49/426 (11%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHF+GIGG+G+ +A++ QG+ VSGSD+ S+ + L G + IGH NI
Sbjct: 18 RIKCIHFIGIGGAGMCGIAEVIKNQGYGVSGSDIKESAVTQRLQSLGIEVFIGHDSKNIA 77
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
D +V SSAI ++N EI A +P+ +R L +L + IAV+G+HGK+
Sbjct: 78 NAD------VIVVSSAIDRNNPEIQAALKAQLPVVRRADMLGELMRYRHGIAVAGAHGKT 131
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S+L ++ G D T ++G + + G + + EADE D FL L P A
Sbjct: 132 TTTSLLTMMMTEAGLDPTYVIGGKLNASGKNASL-GESRYLIAEADESDASFLTLHPMAA 190
Query: 254 VVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
+VTN+D +H++ + + D +K+ + +FL+ + G V+CGD + S++D I +
Sbjct: 191 IVTNIDQDHMETYGNSFDKLKAAYIQFLQNMPFYGLAVVCGDDKELYSMIDDIGR----- 245
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDY--ILCERGRPLA 370
++TYGF N+ A V V+G + +L + PL
Sbjct: 246 --------------------PVLTYGFEPHNNVQATDV--RVEGTKTHFTVLRKDHEPL- 282
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
Q++L IPG HNVLN+LA I T+ D+ E+I K L+KF GV RRF+ +
Sbjct: 283 QLTLNIPGQHNVLNALAAI----TMATDEGVDDEAI---KRALAKFAGVGRRFEQQACVK 335
Query: 431 GCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
+ DD+ HHP EV A ++AAR+ +P + L+ +FQPH Y+R DDF LS+
Sbjct: 336 KDEGDVLLIDDYGHHPVEVAATIKAARESYPERRLVMLFQPHRYTRTRDCYDDFVAVLSQ 395
Query: 487 ADQVVV 492
D++++
Sbjct: 396 VDELML 401
>gi|386393819|ref|ZP_10078600.1| UDP-N-acetylmuramate--alanine ligase [Desulfovibrio sp. U5L]
gi|385734697|gb|EIG54895.1| UDP-N-acetylmuramate--alanine ligase [Desulfovibrio sp. U5L]
Length = 470
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 135/404 (33%), Positives = 201/404 (49%), Gaps = 41/404 (10%)
Query: 92 AKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIP 151
A++ L G+E+SGSDL S ++ L GA + IGH N+ D VV S+A+
Sbjct: 35 AEVLLNLGYEISGSDLAMSQTVKRLGGLGAAISIGHGRENLGHAD------VVVKSTAVT 88
Query: 152 QDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLT 211
DN E++ A+ G+P+ R LA+L IAV+G+HGK+TT S+LA + G D T
Sbjct: 89 NDNPEVVVARERGIPVIPRAEMLAELMRLRTGIAVAGTHGKTTTTSLLATIFTEAGLDPT 148
Query: 212 AIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDA 271
I+G + + G+ G G+ + EADE DG FL L+P +VVTN+D +H+D + +A
Sbjct: 149 VIIGGRLNAYGAGARL-GQGEYLIAEADESDGSFLCLAPIASVVTNVDADHLDHYAGLEA 207
Query: 272 VKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHD 331
+ F FL I G V+C D LL +I +
Sbjct: 208 IDDAFVEFLNGIPFYGVNVVCLDDPGVARLLPRINR------------------------ 243
Query: 332 YKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIAT 391
ITYGF + + S +++ G L ++ L PG HNVLN+L I
Sbjct: 244 -PFITYGFGEKARLRGRILETGAK--SRFLVSLDGEDLGEMRLNHPGRHNVLNALGAIGV 300
Query: 392 VLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQA 451
L ++ + A + L+KF GV RRF++ G G + DD+ HHP E+RA L
Sbjct: 301 SL-------ETGIAPAVIAEALAKFGGVGRRFEIKGERAGVVVVDDYGHHPAEIRATLAT 353
Query: 452 ARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
AR +P++ L+ FQPH +SR L DF AD ++++ +
Sbjct: 354 ARAVYPDRRLVVAFQPHRFSRTKALFGDFCTCFEAADTLLLTEI 397
>gi|293610569|ref|ZP_06692869.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826913|gb|EFF85278.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 482
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 221/429 (51%), Gaps = 49/429 (11%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG+G+ +A++ QG+++SGSD+ S E L + G ++IGH NI+
Sbjct: 21 RIKHIHFVGIGGAGMCGIAEVLGNQGYKISGSDIKASKTTEQLEKNGIKVYIGHQPENIK 80
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
N +V S+AI +N EI A +PI +R L +L + IAV+G+HGK+
Sbjct: 81 N------ANVLVVSTAIDPENPEIKAAIEQRIPIVRRAEMLGELMRYRHGIAVAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S+L +L D T ++G + + G + V EADE D FL L P A
Sbjct: 135 TTTSLLTTMLAEENLDPTYVIGGLLNSTGVNAAL-GESRFIVAEADESDASFLYLQPMAA 193
Query: 254 VVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
+VTN+D +H+D +E D +K F +FL + G V+CGD R +L ++ +
Sbjct: 194 IVTNIDADHMDTYEGSFDKLKDTFVQFLHNLPFYGLAVVCGDDANIREILPRVGR----- 248
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLA 370
+ITYGF+ ND A + Q G S + + +GR
Sbjct: 249 --------------------PVITYGFNEDNDIRAVDIE---QDGMQSHFTVLRKGREPL 285
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
++++ PG+HNVLN+LA I D+ S ++I+ L F GV RRF + G
Sbjct: 286 RLTINQPGLHNVLNALAAIGVAT----DEGVSDDAIS---RALEGFSGVGRRFQVQGEFE 338
Query: 431 ----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
+ DD+ HHP EV A ++AARQ P++ L+ +FQPH YSR DDF LS+
Sbjct: 339 LADGNVKLVDDYGHHPKEVEATIKAARQSHPDRRLVMLFQPHRYSRTRDCFDDFIEVLSQ 398
Query: 487 ADQVVVSAV 495
DQ+++ V
Sbjct: 399 VDQLLLLEV 407
>gi|384208784|ref|YP_005594504.1| UDP-N-acetylmuramate--L-alanine ligase [Brachyspira intermedia
PWS/A]
gi|343386434|gb|AEM21924.1| UDP-N-acetylmuramate--alanine ligase [Brachyspira intermedia PWS/A]
Length = 462
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 146/429 (34%), Positives = 224/429 (52%), Gaps = 44/429 (10%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
F RK IHF+GIGG G+SA+A + GF ++GSDL ++ E L AG ++ GH
Sbjct: 2 FTKRKEKIHFIGIGGIGMSAIASVLNAIGFTITGSDLAKTAKTESLEAAGIKVYYGHKAQ 61
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
NI+ + AVV+SSAI N EI+ AK+ + + R LA+L IA+SGSH
Sbjct: 62 NIEDD-----VTAVVSSSAISPTNEEIIEAKAKKITVIPRGEMLAELMRLRYGIAISGSH 116
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGA-HVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLS 249
GK+TT S+++ ++ G + I+G H + + + V EADE DG FL LS
Sbjct: 117 GKTTTTSLISQIMMHAGLNPVCIIGGNHFNLKSNAACNDLSSEYMVCEADESDGSFLRLS 176
Query: 250 PSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
P + +VTN+D +H+D + + +A++ F F+ ++ G +C + + L
Sbjct: 177 PVINIVTNIDNDHLDYYGNVEALRVAFLEFINKVPFYGCSFLCFEDSVVKDL-------- 228
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILC-ERGRP 368
+ + K +YGFS D+Y + V+ Y
Sbjct: 229 -----------------SKSANKKFYSYGFSKDYDFYVDKDSIRVEAPITYFTAYHNNEC 271
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
L + S+ + G+HNVLNSLA I + L D IA +K L F GV RR +
Sbjct: 272 LGEFSVPLIGIHNVLNSLASIGVGIHLGID-------IADIKEGLKTFEGVGRRLN---K 321
Query: 429 IYGCHI--YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
+Y I +DD+AHHPTE++A L + + + N+ +IAVFQPH YSR +L +DF +A ++
Sbjct: 322 LYDKEITLFDDYAHHPTEIKATLASVKNAYKNRRIIAVFQPHRYSRTELLLNDFESAFND 381
Query: 487 ADQVVVSAV 495
AD+V++S +
Sbjct: 382 ADEVIISDI 390
>gi|168205753|ref|ZP_02631758.1| UDP-N-acetylmuramate--alanine ligase [Clostridium perfringens E
str. JGS1987]
gi|168217610|ref|ZP_02643235.1| UDP-N-acetylmuramate--alanine ligase [Clostridium perfringens NCTC
8239]
gi|189029222|sp|Q0TMG0.2|MURC_CLOP1 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|170662717|gb|EDT15400.1| UDP-N-acetylmuramate--alanine ligase [Clostridium perfringens E
str. JGS1987]
gi|182380340|gb|EDT77819.1| UDP-N-acetylmuramate--alanine ligase [Clostridium perfringens NCTC
8239]
Length = 457
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 137/426 (32%), Positives = 223/426 (52%), Gaps = 48/426 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K+ +HF+GIGG +S LA + L G++VSGSD S L E GA ++IGHS
Sbjct: 6 LKDINKKVHFIGIGGVSMSGLAAVLLNAGYKVSGSDSKESEITNRLKEEGAKIYIGHSKD 65
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAVSG 188
N+Q D VV ++AIP DN EI+ AK + + R +L ++ + K+N +AV+G
Sbjct: 66 NLQDVD------VVVYTAAIPSDNPEIIKAKEDNLILMDRAEFLGQIMKGHKFN-VAVAG 118
Query: 189 SHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGL 248
+HGK+TT SM+++V + D T +VG + G+ G + F+ EA EY FL
Sbjct: 119 THGKTTTTSMISHVALSADLDPTILVGGDL-DIIHGNFRVGNSEYFITEACEYKQSFLRF 177
Query: 249 SPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQD 308
P V ++ N+D +H+D ++D + +K F++F++ I G+++ D + +L+ K +
Sbjct: 178 FPYVGIILNIDADHLDFYKDINHIKDTFKQFVRLIPNDGYIIGNADDEKVMEVLEVAKCN 237
Query: 309 TGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP 368
++TYG ++ D A ++ N +G + + +
Sbjct: 238 -------------------------VLTYGINN-GDIQARNIEFNEKGCATFDVFRNEEK 271
Query: 369 LAQISLQIPGVHNVLNSLAVI--ATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
L +SL +PG+HNV NSL+ + A + + D S LS F G +RF+
Sbjct: 272 LLSLSLNVPGMHNVSNSLSAVCLAEIFNINADAIVS---------GLSSFGGAHKRFEYK 322
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
GT + DD+AHHP E++A L A++ NK ++ VFQPHTY+R L +DF +
Sbjct: 323 GTKNDITVIDDYAHHPVEIKATLSTAKKMNHNK-IVCVFQPHTYTRTKTLFNDFVKCFDD 381
Query: 487 ADQVVV 492
D++V+
Sbjct: 382 CDELVL 387
>gi|431928346|ref|YP_007241380.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas stutzeri RCH2]
gi|431826633|gb|AGA87750.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudomonas stutzeri RCH2]
Length = 485
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 152/424 (35%), Positives = 216/424 (50%), Gaps = 49/424 (11%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
HFVGIGG G+ +A++ L G+EVSGSDL S+ + L GA + IGH N+ G D
Sbjct: 22 HFVGIGGVGMCGIAEVLLNLGYEVSGSDLKESASTDRLQSFGAQIFIGHQAGNVAGAD-- 79
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
+V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+TT S+
Sbjct: 80 ----VLVVSSAVNSANPEVALALEQRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTSL 135
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
LA V A G D T ++G + + G + + EADE D FL L P VAVVTN+
Sbjct: 136 LASVFAAGGLDPTFVIGGRLTAAGTNAQL-GSSRYLIAEADESDASFLHLQPMVAVVTNI 194
Query: 259 DWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
D +H+ + D +K F FL + G V+C D R ++ QI + T
Sbjct: 195 DADHMSTYGGDFGKLKKTFVEFLHNLPFYGLAVLCVDDPVVREIIPQIGRPT-------- 246
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDY--ILCERGRPLAQISLQ 375
TYGFS D A +V +G Y +L + PL +S+
Sbjct: 247 -----------------TTYGFSEDADVRAINV--RQEGMRTYFTVLRDGCEPL-DVSVH 286
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----G 431
+PG HNVLN+LA IA + D+ E+I L++F GV RRF + G +
Sbjct: 287 MPGNHNVLNALATIA----IATDEGIDDEAIIQ---GLAEFAGVGRRFQVYGDLPVENGS 339
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+ HHP EV AV++A R +P + L+ V+QPH YSR L DDF L E++ ++
Sbjct: 340 VMLVDDYGHHPREVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVQVLGESNVLL 399
Query: 492 VSAV 495
+ V
Sbjct: 400 LMEV 403
>gi|258620877|ref|ZP_05715911.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio mimicus VM573]
gi|258625122|ref|ZP_05720039.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio mimicus VM603]
gi|424807599|ref|ZP_18233007.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio mimicus SX-4]
gi|258582573|gb|EEW07405.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio mimicus VM603]
gi|258586265|gb|EEW10980.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio mimicus VM573]
gi|342325541|gb|EGU21321.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio mimicus SX-4]
Length = 486
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 140/439 (31%), Positives = 215/439 (48%), Gaps = 61/439 (13%)
Query: 67 CIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG 126
+V R IHF+GIGG+G+S +A++ L +G+++SGSDL ++ E L E GA + IG
Sbjct: 14 AMVPEMRRVKAIHFIGIGGAGMSGIAEVLLNEGYQISGSDLSANAVTERLAEKGATIFIG 73
Query: 127 HSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAV 186
H N + VV S+AI + N EI A+ +PI +R LA+L + IAV
Sbjct: 74 HEEQN------VAHASVVVVSTAINEQNPEIQAAREKRIPIVRRAEMLAELMRFRHGIAV 127
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEA 238
+G+HGK+TT +++ + G D P F +G + G N + EA
Sbjct: 128 AGTHGKTTTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGSSRILIAEA 178
Query: 239 DEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQC 297
DE D FL L P V +VTN++ +H+D + D + +K F FL + G ++C D
Sbjct: 179 DESDASFLHLQPMVTIVTNIEADHMDTYGGDFENLKQTFIDFLHNLPFYGQAILCIDDPV 238
Query: 298 ARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG 357
R L+ ++ + ++ITYGF+ D E+ Q G
Sbjct: 239 IRELIPRVSR-------------------------QVITYGFAEDADVRIENYRQQGQQG 273
Query: 358 SDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFM 417
+ + +G+ I+L IPG HN LN+ A IA + S + ++
Sbjct: 274 K-FTVVRKGKANLDITLNIPGRHNALNASAAIAVAT-------EDDISDEAILRAMANTQ 325
Query: 418 GVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRL 473
G RRFD +G + + DD+ HHPTEV ++AAR + K L+ +FQPH Y+R
Sbjct: 326 GTGRRFDHLGEFETGNGVAMLVDDYGHHPTEVDVTIKAARNGWAEKRLVMIFQPHRYTRT 385
Query: 474 VVLKDDFANALSEADQVVV 492
L DDFAN L + D +++
Sbjct: 386 RDLYDDFANVLEQVDVLIM 404
>gi|422875438|ref|ZP_16921923.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium perfringens
F262]
gi|380303496|gb|EIA15798.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium perfringens
F262]
Length = 457
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 137/426 (32%), Positives = 223/426 (52%), Gaps = 48/426 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K+ +HF+GIGG +S LA + L G++VSGSD S L E GA ++IGHS
Sbjct: 6 LKDINKKVHFIGIGGVSMSGLAAVLLNAGYKVSGSDSKESEITNRLKEEGAKIYIGHSKD 65
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAVSG 188
N+Q D VV ++AIP DN EI+ AK + + R +L ++ + K+N +AV+G
Sbjct: 66 NLQDVD------VVVYTAAIPSDNPEIIKAKEDNLILMDRAEFLGQIMKGHKFN-VAVAG 118
Query: 189 SHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGL 248
+HGK+TT SM+++V + D T +VG + G+ G + F+ EA EY FL
Sbjct: 119 THGKTTTTSMISHVALSADLDPTILVGGDL-DIIHGNFRVGNSEYFITEACEYKQSFLRF 177
Query: 249 SPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQD 308
P V ++ N+D +H+D ++D + +K F++F++ I G+++ D + +L+ K +
Sbjct: 178 FPYVGIILNIDADHLDFYKDINHIKDTFKQFVRLIPNDGYIIGNADDEKVMEVLEVAKCN 237
Query: 309 TGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP 368
++TYG ++ D A ++ N +G + + +
Sbjct: 238 -------------------------VLTYGINN-GDIQARNIEFNEKGCATFDVFRNEEK 271
Query: 369 LAQISLQIPGVHNVLNSLAVI--ATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
L +SL +PG+HNV NSL+ + A + + D S LS F G +RF+
Sbjct: 272 LLSLSLNVPGMHNVSNSLSAVCLAEIFNINADAIVS---------GLSSFGGAHKRFEYK 322
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
GT + DD+AHHP E++A L A++ NK ++ VFQPHTY+R L +DF +
Sbjct: 323 GTKNDITVIDDYAHHPVEIKATLSTAKKMNHNK-IVCVFQPHTYTRTKTLFNDFVKCFDD 381
Query: 487 ADQVVV 492
D++V+
Sbjct: 382 CDELVL 387
>gi|349574849|ref|ZP_08886781.1| UDP-N-acetylmuramate--L-alanine ligase [Neisseria shayeganii 871]
gi|348013536|gb|EGY52448.1| UDP-N-acetylmuramate--L-alanine ligase [Neisseria shayeganii 871]
Length = 468
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 152/433 (35%), Positives = 213/433 (49%), Gaps = 48/433 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
KNR IHFVGIGGSG+ LA++ + VSGSD S+ L G + GH+
Sbjct: 1 MKNRVKHIHFVGIGGSGMCGLAEVLHNLNYTVSGSDQSESAVTRHLAGLGIRVFAGHAAE 60
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
+I G D VV S+A+ QDN E+ A + VP+ R LA+L IA++G+H
Sbjct: 61 HIAGAD------VVVTSTAVQQDNPEVAAALAAKVPVIPRALMLAELMRFREGIAIAGTH 114
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S+ A +L A G D T ++G + + GGG+ V EADE D FL L+P
Sbjct: 115 GKTTTTSLTASILAAGGLDPTFVIGGKLTAAGTNAQL-GGGEYIVAEADESDASFLYLTP 173
Query: 251 SVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
++VVTN+D +H+D + D + F F+ ++ G +C DS+ R++L Q+K+
Sbjct: 174 VMSVVTNIDTDHMDTYGHSVDKLHQAFVEFIHRMPFYGKAFLCIDSEHVRAILPQVKK-- 231
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR-- 367
TYG D YA V + + G
Sbjct: 232 -----------------------PFATYGLEDSADIYATDVRSEGAQMCFTVHVKDGSVA 268
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
P A + L PG HNVLN+LA I L + + ++ L+ F GV RRF G
Sbjct: 269 PFA-VRLNFPGRHNVLNALAAIGVAL-------ECEVPVEAIQCGLADFGGVGRRFQSYG 320
Query: 428 TIY-----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFAN 482
I + DD+ HHP E+ A L AAR +P+K L+ FQPH Y+R L DDF N
Sbjct: 321 DIALPGGGSALVIDDYGHHPVEMAATLAAARGAYPDKRLVLAFQPHRYTRTRDLFDDFVN 380
Query: 483 ALSEADQVVVSAV 495
L+ AD VV++ V
Sbjct: 381 VLNTADSVVLTDV 393
>gi|261876162|ref|YP_697180.2| UDP-N-acetylmuramate--L-alanine ligase [Clostridium perfringens
ATCC 13124]
gi|255529905|gb|ABG83104.2| UDP-N-acetylmuramate--alanine ligase [Clostridium perfringens ATCC
13124]
Length = 466
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 137/426 (32%), Positives = 223/426 (52%), Gaps = 48/426 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K+ +HF+GIGG +S LA + L G++VSGSD S L E GA ++IGHS
Sbjct: 15 LKDINKKVHFIGIGGVSMSGLAAVLLNAGYKVSGSDSKESEITNRLKEEGAKIYIGHSKD 74
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAVSG 188
N+Q D VV ++AIP DN EI+ AK + + R +L ++ + K+N +AV+G
Sbjct: 75 NLQDVD------VVVYTAAIPSDNPEIIKAKEDNLILMDRAEFLGQIMKGHKFN-VAVAG 127
Query: 189 SHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGL 248
+HGK+TT SM+++V + D T +VG + G+ G + F+ EA EY FL
Sbjct: 128 THGKTTTTSMISHVALSADLDPTILVGGDL-DIIHGNFRVGNSEYFITEACEYKQSFLRF 186
Query: 249 SPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQD 308
P V ++ N+D +H+D ++D + +K F++F++ I G+++ D + +L+ K +
Sbjct: 187 FPYVGIILNIDADHLDFYKDINHIKDTFKQFVRLIPNDGYIIGNADDEKVMEVLEVAKCN 246
Query: 309 TGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP 368
++TYG ++ D A ++ N +G + + +
Sbjct: 247 -------------------------VLTYGINN-GDIQARNIEFNEKGCATFDVFRNEEK 280
Query: 369 LAQISLQIPGVHNVLNSLAVI--ATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
L +SL +PG+HNV NSL+ + A + + D S LS F G +RF+
Sbjct: 281 LLSLSLNVPGMHNVSNSLSAVCLAEIFNINADAIVS---------GLSSFGGAHKRFEYK 331
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
GT + DD+AHHP E++A L A++ NK ++ VFQPHTY+R L +DF +
Sbjct: 332 GTKNDITVIDDYAHHPVEIKATLSTAKKMNHNK-IVCVFQPHTYTRTKTLFNDFVKCFDD 390
Query: 487 ADQVVV 492
D++V+
Sbjct: 391 CDELVL 396
>gi|302036133|ref|YP_003796455.1| UDP-N-acetylmuramate-L-alanine ligase [Candidatus Nitrospira
defluvii]
gi|300604197|emb|CBK40529.1| UDP-N-acetylmuramate-L-alanine ligase [Candidatus Nitrospira
defluvii]
Length = 460
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 152/422 (36%), Positives = 224/422 (53%), Gaps = 45/422 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH VGIGGSG+S +A++ L G++VSGSDL S L E G + IGH SNI
Sbjct: 8 IHLVGIGGSGMSGIAEVLLTLGYKVSGSDLSQSETTRRLEELGGRIAIGHHESNIGE--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSA+ N E++ AK+ +P+ R LA+L +A++G+HGK+TT S
Sbjct: 65 ---AQVVVISSAVAATNPEVVAAKARQIPVIPRAEMLAELMRLKFGVAIAGAHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A VL G D T ++G V + G G + EADE DG FL L+P++A VTN
Sbjct: 122 MVANVLAQGGLDPTMVIGGKVNALGSHARL-GRGDLLIAEADESDGSFLRLAPTIAAVTN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI---KQDTGL-KY 313
+D EH+D + + + F F+ ++ G V+C D + R+LL ++ Q GL ++
Sbjct: 181 IDREHLDHYGSMEKLNDSFLEFVNKVPFYGLAVLCSDDERLRNLLPRVVKRYQTYGLHEH 240
Query: 314 SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQIS 373
G V +++D+ S W GS++ + RGR L
Sbjct: 241 PGHVPDFRATDI---------------SLRQW-----------GSEFRVFFRGRNLGPFR 274
Query: 374 LQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH 433
L IPG+HNV NSL IA + L + ++ L+ F GV RRF L G G
Sbjct: 275 LSIPGIHNVSNSLVAIAIGMEL-------DIPVDLIRKGLAAFSGVERRFHLRGEKAGIM 327
Query: 434 IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVS 493
+ DD+ HHPTEVRA + AA+Q + ++ ++ +FQPH YSR L +FA+A +AD + ++
Sbjct: 328 VVDDYGHHPTEVRATIAAAKQGW-DRRVVVLFQPHRYSRSRDLMQEFAHAFDQADALFMT 386
Query: 494 AV 495
+
Sbjct: 387 EI 388
>gi|296394963|ref|YP_003659847.1| UDP-N-acetylmuramate--L-alanine ligase [Segniliparus rotundus DSM
44985]
gi|296182110|gb|ADG99016.1| UDP-N-acetylmuramate/alanine ligase [Segniliparus rotundus DSM
44985]
Length = 475
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 153/424 (36%), Positives = 218/424 (51%), Gaps = 39/424 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HFVGIGG+G+SA+A++ L +G VSGSDL S + L GA + +GH + DG
Sbjct: 7 VHFVGIGGAGMSAVARILLARGAGVSGSDLKDSRAITDLRARGAQVLVGHDARALDFLDG 66
Query: 138 SRFPNAVVAS-SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
P AVV S +AIP+DN E++ A+ GVP+ R LA L E + VSG+HGK+TT
Sbjct: 67 G--PTAVVVSQAAIPEDNPELVEARKRGVPVLYRPQVLAALMEGSTRVLVSGTHGKTTTT 124
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
S+ L+ G D + VG + + + G G FV EADE DG L P AVVT
Sbjct: 125 SLTVAALQQAGLDPSFAVGGELGE-AGTNAHQGSGNAFVAEADESDGSLLRYQPDAAVVT 183
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F +A ++F +F++QI GG L++ D D G G
Sbjct: 184 NVEADHLDHFGSSEAYVAVFDQFVRQIAPGGSLIVDVD-------------DPGAAALGS 230
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSS-FNDWYAESVCPNVQGGSDYILCERGRPLAQISLQ 375
+ + + G G + ++ DW P+ +G ++ E G S+
Sbjct: 231 RAAAAGTRVLGYGSNQAPAGVLLAARLADW-----SPHGEGARLTVVFEPGGERV-FSIG 284
Query: 376 IPGVHNVLNSL-AVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHI 434
+PG H N+L AV+A V + S+ +S F GV RRF L G G +
Sbjct: 285 VPGRHMARNALGAVLAAVF--------AGASLDGAISGVSAFTGVRRRFQLKGAERGVRV 336
Query: 435 YDDFAHHPTEVRAVLQAARQRF--PNKA----LIAVFQPHTYSRLVVLKDDFANALSEAD 488
+DD+AHHPTEV A L AR P+ + L+ VFQPH YSR + +FA AL AD
Sbjct: 337 FDDYAHHPTEVAATLAGARALVTDPDGSCSGRLVVVFQPHMYSRTRLFATEFAAALEAAD 396
Query: 489 QVVV 492
+V+V
Sbjct: 397 EVLV 400
>gi|449143730|ref|ZP_21774553.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio mimicus CAIM 602]
gi|449080728|gb|EMB51639.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio mimicus CAIM 602]
Length = 486
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 140/439 (31%), Positives = 215/439 (48%), Gaps = 61/439 (13%)
Query: 67 CIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG 126
+V R IHF+GIGG+G+S +A++ L +G+++SGSDL ++ E L E GA + IG
Sbjct: 14 AMVPEMRRVKAIHFIGIGGAGMSGIAEVLLNEGYQISGSDLSANAVTERLAEKGATIFIG 73
Query: 127 HSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAV 186
H N + VV S+AI + N EI A+ +PI +R LA+L + IAV
Sbjct: 74 HEEQN------VAHASVVVVSTAINEQNPEIQAAREKRIPIVRRAEMLAELMRFRHGIAV 127
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEA 238
+G+HGK+TT +++ + G D P F +G + G N + EA
Sbjct: 128 AGTHGKTTTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGSSRILIAEA 178
Query: 239 DEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQC 297
DE D FL L P V +VTN++ +H+D + D + +K F FL + G ++C D
Sbjct: 179 DESDASFLHLQPMVTIVTNIEADHMDTYGGDFENLKQTFIDFLHNLPFYGQAILCIDDPV 238
Query: 298 ARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG 357
R L+ ++ + ++ITYGF+ D E+ Q G
Sbjct: 239 IRELIPRVSR-------------------------QVITYGFAEDADVRIENYRQQGQQG 273
Query: 358 SDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFM 417
+ + +G+ I+L IPG HN LN+ A IA + S + ++
Sbjct: 274 K-FTVVRKGKADLDITLNIPGRHNALNASAAIAVAT-------EDDISDEAILRAMANTQ 325
Query: 418 GVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRL 473
G RRFD +G + + DD+ HHPTEV ++AAR + K L+ +FQPH Y+R
Sbjct: 326 GTGRRFDHLGEFETGNGVAMLVDDYGHHPTEVDVTIKAARNGWAEKRLVMIFQPHRYTRT 385
Query: 474 VVLKDDFANALSEADQVVV 492
L DDFAN L + D +++
Sbjct: 386 RDLYDDFANVLEQVDVLIM 404
>gi|312885129|ref|ZP_07744813.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309367202|gb|EFP94770.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 489
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 143/432 (33%), Positives = 221/432 (51%), Gaps = 45/432 (10%)
Query: 66 ECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHI 125
+V R IHF+GIGG+G+S +A++ L +G++++GSD+ + + L + GA ++I
Sbjct: 13 RAVVPEMRRVKSIHFIGIGGAGMSGIAEVLLNEGYQITGSDITANLVTDNLSQKGAKVYI 72
Query: 126 GHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIA 185
GHS NI +D S VV S+AI N EI+ A+ +PI +R LA+L + IA
Sbjct: 73 GHSADNI--SDAS----VVVISTAIDDHNPEIIAARQARIPIVRRAEMLAELMRFRHGIA 126
Query: 186 VSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCF 245
++G+HGK+TT +++ + G D T + G V + S G + + EADE D F
Sbjct: 127 IAGTHGKTTTTALVTQIYSEAGLDPTFVNGGLV-KSAGASARLGSSRILIAEADESDASF 185
Query: 246 LGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 304
L L P V++VTN++ +H+D + D + +K F FL + G ++C D R L+ +
Sbjct: 186 LHLQPMVSIVTNIEADHMDTYAGDFEKLKQTFIDFLHNLPFYGQAIVCIDDPIVRDLIPK 245
Query: 305 IKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE 364
I + ++ITYGFS D E+ G + +
Sbjct: 246 ISR-------------------------QVITYGFSEHADVRIENYHQTGHQGQ-FTVVR 279
Query: 365 RGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFD 424
G+PL I+L IPG HN LN+ A IA + E+I ++ G RRF+
Sbjct: 280 EGKPLLDITLNIPGRHNALNAAAAIAVAT----EDDIKDEAILS---AMASTQGTGRRFE 332
Query: 425 LIG---TIYG-CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
+G T G + DD+ HHPTEV +QAAR +P L+ ++QPH +SR L DDF
Sbjct: 333 HLGEFDTDKGQVMLVDDYGHHPTEVDVTIQAARNGWPQSRLVMIYQPHRFSRTRDLYDDF 392
Query: 481 ANALSEADQVVV 492
N L D +++
Sbjct: 393 VNVLERVDVLIM 404
>gi|331001071|ref|ZP_08324702.1| UDP-N-acetylmuramate--L-alanine ligase [Parasutterella
excrementihominis YIT 11859]
gi|329569376|gb|EGG51154.1| UDP-N-acetylmuramate--L-alanine ligase [Parasutterella
excrementihominis YIT 11859]
Length = 462
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 149/426 (34%), Positives = 227/426 (53%), Gaps = 50/426 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G++ +A++ + G+ VSGSDL ++ +E L GA + IGH SN+ G+ G
Sbjct: 8 IHFVGIGGTGMNGIAEVLINLGYHVSGSDLKENAAVEHLRSIGAEIFIGHDASNV-GDAG 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV S+A+ DN E++ AK+ +P+ R LA+L IAV+G+HGK+TT S
Sbjct: 67 -----VVVTSTAVHADNPEVVEAKNRNIPVVPRAIMLAELMRLRQGIAVAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++ +L+ G D T ++G + + G G V EADE D FL LSP ++VVTN
Sbjct: 122 LITSILERGGLDPTFVIGGRL-NAAGSNAKLGQGLYIVAEADESDASFLNLSPVISVVTN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D ++ F F++++ G V+C +S+ R++L +I +
Sbjct: 181 IDEDHMDTYGHDLRNLRKAFTDFIQRLPFYGRAVMCIESENVRAILPKITK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSD--YILCERGRPLAQISL 374
I+TYGF AE++ + G+ + L G +I++
Sbjct: 232 ----------------PILTYGFREDAQIRAENIRAD---GTQMHFTLVRDGAAPEEITV 272
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH- 433
+PGVHNVLNSLA I LTL + +K L+ F GV RRF + G
Sbjct: 273 NLPGVHNVLNSLAAIGVALTL-------DVPMEAIKEALATFKGVGRRFAVWGEAQSLKG 325
Query: 434 ----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
+ DD+ HHPTE+ A + AAR +P++ L+ FQPH Y+R +D LS AD
Sbjct: 326 EKFLVVDDYGHHPTEMAATIAAARGAYPDRRLLVAFQPHRYTRTRDCFEDLVRVLSNADA 385
Query: 490 VVVSAV 495
+V+ AV
Sbjct: 386 LVLEAV 391
>gi|306820583|ref|ZP_07454214.1| UDP-N-acetylmuramate--L-alanine ligase [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304551400|gb|EFM39360.1| UDP-N-acetylmuramate--L-alanine ligase [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 452
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 132/419 (31%), Positives = 217/419 (51%), Gaps = 38/419 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
I F+GIGG +S LA + G+EV GSD S+ + L G ++IGH+ +I +
Sbjct: 3 IFFIGIGGISMSGLAMICKNLGWEVIGSDREDSNVIHQLERKGIKVYIGHNKDHITSD-- 60
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKSTTA 196
+ VV ++A+ QDN EI+ K +G+ + +R +L + ++Y N IA++G+HGK+TT
Sbjct: 61 ---IDKVVFTAAVKQDNEEIIKTKELGIDLVERSVFLGSIMKEYENSIAIAGTHGKTTTT 117
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM+ V + T+++G G++ G F+ EA EY FL P VAV+T
Sbjct: 118 SMITLVFDKAEKNPTSLIGGMFKNIG-GNVEIGNSDIFISEACEYVDSFLQFYPKVAVIT 176
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D FED +K+ F +F Q++ GG ++ GD + R L K++ + Y G
Sbjct: 177 NIEEDHLDYFEDLSQIKNSFLKFANQVKEGGFVIANGDDENVRDTLKDCKRN--VYYYG- 233
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+ +G+D+ I F F C ++ +D +L + + L +
Sbjct: 234 ---------FNEGNDFIIDNLEFDDFG-----YPCFDIFYANDGVLIDNYK------LNV 273
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
G HNV N+ + I + L +K +K + KF GV RRF+ IG G ++D
Sbjct: 274 FGKHNVYNATSAIVSACMLDIEKED-------IKNAIEKFTGVGRRFEYIGEKDGVRVFD 326
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHPTE+++ L A + N+ ++FQPHTY+R L +F E D + + +
Sbjct: 327 DYAHHPTEIKSTLDAIKSLKKNR-FFSIFQPHTYTRTKALFKEFVECFDETDIAIFADI 384
>gi|168213417|ref|ZP_02639042.1| UDP-N-acetylmuramate--alanine ligase [Clostridium perfringens CPE
str. F4969]
gi|170715048|gb|EDT27230.1| UDP-N-acetylmuramate--alanine ligase [Clostridium perfringens CPE
str. F4969]
Length = 457
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 137/426 (32%), Positives = 223/426 (52%), Gaps = 48/426 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K+ +HF+GIGG +S LA + L G++VSGSD S L E GA ++IGHS
Sbjct: 6 LKDINKKVHFIGIGGVSMSGLAAVLLNAGYKVSGSDSKESEITNRLKEEGAKIYIGHSKD 65
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAVSG 188
N+Q D VV ++AIP DN EI+ AK + + R +L ++ + K+N +AV+G
Sbjct: 66 NLQDVD------VVVYTAAIPSDNPEIIKAKEDNLILMDRAEFLGQIMKGHKFN-VAVAG 118
Query: 189 SHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGL 248
+HGK+TT SM+++V + D T +VG + G+ G + F+ EA EY FL
Sbjct: 119 THGKTTTTSMISHVALSADLDPTILVGGDL-DIIHGNFRVGNSEYFITEACEYKQSFLRF 177
Query: 249 SPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQD 308
P V ++ N+D +H+D ++D + +K F++F++ I G+++ D + +L+ K +
Sbjct: 178 FPYVGIILNIDADHLDFYKDINHIKDTFKQFVRLIPNDGYIIGNADDEKVMEVLEVAKCN 237
Query: 309 TGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP 368
++TYG ++ D A ++ N +G + + +
Sbjct: 238 -------------------------VLTYGINN-GDIQARNIEFNEKGCATFDVFRNEEK 271
Query: 369 LAQISLQIPGVHNVLNSLAVI--ATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
L +SL +PG+HNV NSL+ + A + + D S LS F G +RF+
Sbjct: 272 LLSLSLNVPGMHNVSNSLSAVCLAEIFNINADAIVS---------GLSSFGGAHKRFEYK 322
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
GT + DD+AHHP E++A L A++ NK ++ VFQPHTY+R L +DF +
Sbjct: 323 GTKNDITVIDDYAHHPVEIKATLSTAKKMNHNK-IVCVFQPHTYTRTKTLFNDFVKCFDD 381
Query: 487 ADQVVV 492
D++V+
Sbjct: 382 CDELVL 387
>gi|296129443|ref|YP_003636693.1| UDP-N-acetylmuramate--L-alanine ligase [Cellulomonas flavigena DSM
20109]
gi|296021258|gb|ADG74494.1| UDP-N-acetylmuramate/alanine ligase [Cellulomonas flavigena DSM
20109]
Length = 895
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 149/423 (35%), Positives = 215/423 (50%), Gaps = 36/423 (8%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G +H VG+GG+G+SA+A L +G VSGSD + GL AG +H+GH+ ++++
Sbjct: 410 GRVHLVGVGGAGMSAIAPLLAARGLSVSGSDAHDGPALAGLRAAGVEVHVGHAAAHVEDV 469
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D ++V SSA+ N E++ A+ GVP+ R LA L + +AV+G+HGK+TT
Sbjct: 470 D------SLVVSSAVRSTNPEVVRARERGVPVLHRSEALAALMADRDAVAVAGAHGKTTT 523
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPD--GSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
+ MLA L G D + +G V G +G G FV EADE DG FL P VA
Sbjct: 524 SGMLAAALVHAGADPSFAIGGVVRATAGTLGGARHGDGP-FVAEADESDGSFLAYEPLVA 582
Query: 254 VVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 313
VVTN++ +H+D + + ++ F RF ++R GG LV C D A L+ ++ L
Sbjct: 583 VVTNVEPDHLDHYGTRERFEAAFERFADRVRDGGLLVACADDPGAARLVAAVRHR--LTE 640
Query: 314 SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQIS 373
G + TYG S+ D G +L R +
Sbjct: 641 RG----------------VALRTYGTSADADVRVGESRSTPDGRWRVVLSPRDEEPVTLH 684
Query: 374 LQIPGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC 432
LQ+ G HN L++ A + L +G S E+ A L F+G RRF+ GT G
Sbjct: 685 LQVAGAHNALDAAAAWCALRRLGVG----SAEAAAGLD----DFVGTGRRFEDRGTAAGV 736
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+ DD+AHHPTEV A+L+AARQ + ++ +FQPH +SR +F A AD VVV
Sbjct: 737 RVVDDYAHHPTEVAALLRAARQVAGDGRVLVLFQPHLFSRTRTFAREFGEAFDLADAVVV 796
Query: 493 SAV 495
+ V
Sbjct: 797 TDV 799
>gi|422347558|ref|ZP_16428469.1| UDP-N-acetylmuramate-L-alanine ligase [Clostridium perfringens
WAL-14572]
gi|373223828|gb|EHP46172.1| UDP-N-acetylmuramate-L-alanine ligase [Clostridium perfringens
WAL-14572]
Length = 457
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 137/426 (32%), Positives = 223/426 (52%), Gaps = 48/426 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K+ +HF+GIGG +S LA + L G++VSGSD S L E GA ++IGHS
Sbjct: 6 LKDINKKVHFIGIGGVSMSGLAAVLLNAGYKVSGSDSKESEITNRLKEEGAKIYIGHSKD 65
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAVSG 188
N+Q D VV ++AIP DN EI+ AK + + R +L ++ + K+N +AV+G
Sbjct: 66 NLQDVD------VVVYTAAIPSDNPEIIKAKEDNLILMDRAEFLGQIMKGHKFN-VAVAG 118
Query: 189 SHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGL 248
+HGK+TT SM+++V + D T +VG + G+ G + F+ EA EY FL
Sbjct: 119 THGKTTTTSMISHVALSSDLDPTILVGGDL-DIIHGNFRVGNSEYFITEACEYKQSFLRF 177
Query: 249 SPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQD 308
P V ++ N+D +H+D ++D + +K F++F++ I G+++ D + +L+ K +
Sbjct: 178 FPYVGIILNIDADHLDFYKDINHIKDTFKQFVRLIPNDGYIIGNADDEKVMEVLEVAKCN 237
Query: 309 TGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP 368
++TYG ++ D A ++ N +G + + +
Sbjct: 238 -------------------------VLTYGINN-GDIQARNIEFNEKGCATFDVFRNEEK 271
Query: 369 LAQISLQIPGVHNVLNSLAVI--ATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
L +SL +PG+HNV NSL+ + A + + D S LS F G +RF+
Sbjct: 272 LLSLSLNVPGMHNVSNSLSAVCLAEIFNINADAIVS---------GLSSFGGAHKRFEYK 322
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
GT + DD+AHHP E++A L A++ NK ++ VFQPHTY+R L +DF +
Sbjct: 323 GTKNDITVIDDYAHHPVEIKATLSTAKKMNHNK-IVCVFQPHTYTRTKTLFNDFVKCFDD 381
Query: 487 ADQVVV 492
D++V+
Sbjct: 382 CDELVL 387
>gi|303258235|ref|ZP_07344242.1| UDP-N-acetylmuramate--alanine ligase [Burkholderiales bacterium
1_1_47]
gi|302858988|gb|EFL82072.1| UDP-N-acetylmuramate--alanine ligase [Burkholderiales bacterium
1_1_47]
Length = 462
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 149/426 (34%), Positives = 227/426 (53%), Gaps = 50/426 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G++ +A++ + G+ VSGSDL ++ +E L GA + IGH SN+ G+ G
Sbjct: 8 IHFVGIGGTGMNGIAEVLINLGYHVSGSDLKENAAVEHLRSIGAEIFIGHDASNV-GDAG 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV S+A+ DN E++ AK+ +P+ R LA+L IAV+G+HGK+TT S
Sbjct: 67 -----VVVTSTAVHADNPEVVEAKNRNIPVVPRAIMLAELMRLRQGIAVAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++ +L+ G D T ++G + + G G V EADE D FL LSP ++VVTN
Sbjct: 122 LITSILERGGLDPTFVIGGRL-NAAGSNAKLGQGLYIVAEADESDASFLNLSPVISVVTN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D ++ F F++++ G V+C +S+ R++L +I +
Sbjct: 181 IDEDHMDTYGHDLRNLRKAFTDFIQRLPFYGRAVMCIESENVRAILPKITK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSD--YILCERGRPLAQISL 374
I+TYGF AE++ + G+ + L G +I++
Sbjct: 232 ----------------PILTYGFREDAQIRAENIRAD---GTQMHFTLVRDGAAPEEITV 272
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH- 433
+PGVHNVLNSLA I LTL + +K L+ F GV RRF + G
Sbjct: 273 NLPGVHNVLNSLAAIGVALTL-------DVPMEAIKEALATFKGVGRRFAVWGEAQSLKG 325
Query: 434 ----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
+ DD+ HHPTE+ A + AAR +P++ L+ FQPH Y+R +D LS AD
Sbjct: 326 EKFLVVDDYGHHPTEMAATIAAARGAYPDRRLLVAFQPHRYTRTRDCFEDLVRVLSNADA 385
Query: 490 VVVSAV 495
+V+ AV
Sbjct: 386 LVLEAV 391
>gi|322436296|ref|YP_004218508.1| UDP-N-acetylmuramate--L-alanine ligase [Granulicella tundricola
MP5ACTX9]
gi|321164023|gb|ADW69728.1| UDP-N-acetylmuramate/alanine ligase [Granulicella tundricola
MP5ACTX9]
Length = 463
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 151/396 (38%), Positives = 212/396 (53%), Gaps = 42/396 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG G+S +A++ + G+ VSGSDL S+ E L + GA ++IGH+ +N +D
Sbjct: 15 VHFIGIGGIGMSGIAEILVTMGYSVSGSDLRGSAVTERLEKMGATIYIGHAAANAAASD- 73
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSA+ +DN E+L A++ +P+ +R LA+L IAV+G HGK+TT S
Sbjct: 74 -----VVVTSSAVSKDNPEVLEARARKIPVIQRAEMLAELMRLKYGIAVAGMHGKTTTTS 128
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A VL G D T +VG V + G + V EADE D FL LSP +AVVTN
Sbjct: 129 MIAAVLAGGGLDPTVVVGGRVDALGSNARL-GTSQYLVAEADESDRSFLKLSPILAVVTN 187
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
LD EH D + D V + F +F+ + G C D++ R +L ++++
Sbjct: 188 LDREHTDCYPTMDDVDAAFLQFMDALPFYGATTACIDNERLRGILPRVRR---------- 237
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPLAQISLQI 376
K+ TYG S D+ E + P V G S + + RG L L +
Sbjct: 238 ---------------KVYTYGESHDADFRLE-MLPGVDGVRSTFEVNYRGLLLGPFELHV 281
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG HNVLN+ A IA + L D A + L+ F GV RRF L GT+ G + D
Sbjct: 282 PGRHNVLNATAAIAVGVQLGIDP-------ASIAKGLATFRGVDRRFQLKGTVGGIAVVD 334
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSR 472
D+ HHPTE+ A L+AAR + L+ VFQPH Y+R
Sbjct: 335 DYGHHPTEITATLKAARDCGYGRVLV-VFQPHRYTR 369
>gi|300788096|ref|YP_003768387.1| UDP-N-acetylmuramate--L-alanine ligase [Amycolatopsis mediterranei
U32]
gi|384151526|ref|YP_005534342.1| UDP-N-acetylmuramate--L-alanine ligase [Amycolatopsis mediterranei
S699]
gi|399539979|ref|YP_006552641.1| UDP-N-acetylmuramate--alanine ligase [Amycolatopsis mediterranei
S699]
gi|299797610|gb|ADJ47985.1| UDP-N-acetylmuramate--alanine ligase [Amycolatopsis mediterranei
U32]
gi|340529680|gb|AEK44885.1| UDP-N-acetylmuramate--L-alanine ligase [Amycolatopsis mediterranei
S699]
gi|398320749|gb|AFO79696.1| UDP-N-acetylmuramate--alanine ligase [Amycolatopsis mediterranei
S699]
Length = 465
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 149/414 (35%), Positives = 220/414 (53%), Gaps = 32/414 (7%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
H +GIGG+G+S +A++ L +G VSGSD S + L GA L +G S +NI + +
Sbjct: 12 HLIGIGGAGMSGIARILLARGAFVSGSDAKESRALLSLRAQGAELFVGQSAANI--SSLA 69
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
P+AVV S+AI + N E+ A++ G+P+ R LA L E + + ++G+HGK++T SM
Sbjct: 70 EPPSAVVVSTAIKETNPELAAARAAGIPVLHRAQALAGLMEGHRVACIAGTHGKTSTTSM 129
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
L L+ D + +G + + + +G G FV EADE DG FL SPSVAVVTN+
Sbjct: 130 LTVALQHCRLDPSFAIGGDLNES-GANAHHGEGGVFVAEADESDGSFLTYSPSVAVVTNV 188
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVV 318
+ +H+D +A +F F+ +I GG L++CGD A L Q +D G++ V
Sbjct: 189 EPDHLDHHGTAEAYTKVFTEFVSRIVPGGLLIVCGDDPAADDLGRQ-AEDLGVR-----V 242
Query: 319 SNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPG 378
G G D +I+ Y P GG ++ + G ++ + + +PG
Sbjct: 243 RRYGRTATGPG-DARILEY-------------VPAPDGGVVRLVLD-GEEVS-VRVAVPG 286
Query: 379 VHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDF 438
H LN++A + + L + L L+ F GV RRF+ G +YDD+
Sbjct: 287 EHMALNAIAALLAGIEL-------GAPVPGLVDGLAAFGGVRRRFEFKGRAGDVRVYDDY 339
Query: 439 AHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
AHHPTEV A L+A R + +I VFQPH YSR +FA ALS AD+VVV
Sbjct: 340 AHHPTEVAAQLRAVRTAAGSGRVIVVFQPHLYSRTKTFSVEFAEALSLADEVVV 393
>gi|262280495|ref|ZP_06058279.1| UDP-N-acetylmuramate-alanine ligase [Acinetobacter calcoaceticus
RUH2202]
gi|299768392|ref|YP_003730418.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter oleivorans
DR1]
gi|424743670|ref|ZP_18171977.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
WC-141]
gi|262258273|gb|EEY77007.1| UDP-N-acetylmuramate-alanine ligase [Acinetobacter calcoaceticus
RUH2202]
gi|298698480|gb|ADI89045.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter oleivorans
DR1]
gi|422943185|gb|EKU38209.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter baumannii
WC-141]
Length = 482
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 148/429 (34%), Positives = 221/429 (51%), Gaps = 49/429 (11%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG+G+ +A++ QG+++SGSD+ S E L + G ++IGH NI+
Sbjct: 21 RIKHIHFVGIGGAGMCGIAEVLGNQGYKISGSDIKASKTTEQLEQNGIKVYIGHQAENIK 80
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
N +V S+AI +N EI A PI +R L +L + IAV+G+HGK+
Sbjct: 81 N------ANVLVVSTAIDPENPEIKAAIEQRTPIVRRAEMLGELMRYRHGIAVAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S+L +L D T ++G + + G + V EADE D FL L P A
Sbjct: 135 TTTSLLTTMLAEENLDPTYVIGGLLNSTGVNAAL-GESRFIVAEADESDASFLYLQPMAA 193
Query: 254 VVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
+VTN+D +H+D +E D +K F +FL + G V+CGD R ++ ++ +
Sbjct: 194 IVTNIDADHMDTYEGSFDKLKDTFVQFLHNLPFYGLAVVCGDDANIREIMPRVGR----- 248
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLA 370
+ITYGF+ ND A V Q G S + + +GR
Sbjct: 249 --------------------PVITYGFNEDNDIRAIDVE---QDGMRSHFTVLRKGREPL 285
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
++++ PG+HN+LN+LA I D+ S ++I+ L+ F GV RRF + G
Sbjct: 286 RLTINQPGMHNILNALAAIGVAT----DEGVSDDAIS---RALAGFSGVGRRFQVQGEFE 338
Query: 431 ----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
+ DD+ HHP EV A ++AARQ P++ L+ +FQPH YSR DDF LS+
Sbjct: 339 LADGNVKLVDDYGHHPKEVEATIKAARQSHPDRRLVMLFQPHRYSRTRDCFDDFIEVLSQ 398
Query: 487 ADQVVVSAV 495
DQ+++ V
Sbjct: 399 VDQLLLLEV 407
>gi|182624328|ref|ZP_02952113.1| UDP-N-acetylmuramate--alanine ligase [Clostridium perfringens D
str. JGS1721]
gi|177910546|gb|EDT72919.1| UDP-N-acetylmuramate--alanine ligase [Clostridium perfringens D
str. JGS1721]
Length = 457
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 137/426 (32%), Positives = 223/426 (52%), Gaps = 48/426 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K+ +HF+GIGG +S LA + L G++VSGSD S L E GA ++IGHS
Sbjct: 6 LKDINKKVHFIGIGGVSMSGLAAVLLNAGYKVSGSDSKESEITNRLKEEGAKIYIGHSKD 65
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAVSG 188
N+Q D VV ++AIP DN EI+ AK + + R +L ++ + K+N +AV+G
Sbjct: 66 NLQDVD------VVVYTAAIPSDNPEIIKAKEDNLILMDRAEFLGQIMKGHKFN-VAVAG 118
Query: 189 SHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGL 248
+HGK+TT SM+++V + D T +VG + G+ G + F+ EA EY FL
Sbjct: 119 THGKTTTTSMISHVALSADLDPTILVGGDL-DIIHGNFRVGNSEYFITEACEYKQSFLRF 177
Query: 249 SPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQD 308
P V ++ N+D +H+D ++D + +K F++F++ I G+++ D + +L+ K +
Sbjct: 178 FPYVGIILNIDADHLDFYKDINHIKDTFKQFVRLIPNDGYIIGNADDEKVMEVLEVAKCN 237
Query: 309 TGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP 368
++TYG ++ D A ++ N +G + + +
Sbjct: 238 -------------------------VLTYGINN-GDIQARNIEFNEKGCATFDVFRNEEK 271
Query: 369 LAQISLQIPGVHNVLNSLAVI--ATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
L +SL +PG+HNV NSL+ + A + + D S LS F G +RF+
Sbjct: 272 LLSLSLNVPGMHNVSNSLSAVCLAEIFNINADAIVS---------GLSSFGGAHKRFEYK 322
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
GT + DD+AHHP E++A L A++ NK ++ VFQPHTY+R L +DF +
Sbjct: 323 GTKNDITVIDDYAHHPVEIKATLSTAKKMNHNK-IVCVFQPHTYTRTKTLFNDFVKCFDD 381
Query: 487 ADQVVV 492
D++V+
Sbjct: 382 CDELVL 387
>gi|298252627|ref|ZP_06976421.1| UDP-N-acetylmuramate-alanine ligase [Gardnerella vaginalis 5-1]
gi|297532991|gb|EFH71875.1| UDP-N-acetylmuramate-alanine ligase [Gardnerella vaginalis 5-1]
Length = 520
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 146/438 (33%), Positives = 233/438 (53%), Gaps = 40/438 (9%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G +HF+GIGG+G+S LA++ ++G VSG D + + + L E G + IG S S+++
Sbjct: 34 GRVHFIGIGGAGMSVLAEMLHEEGVSVSGCDREANDHTQRLEELGIEVEIGQSASHVEHA 93
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D +V SSAI N EI+ A G+ + R LA L + V+G+HGK+TT
Sbjct: 94 D------VLVYSSAIKPSNPEIMAAHERGIKLVHRSDILALLLSAKTGVTVAGAHGKTTT 147
Query: 196 ASMLAYVLK--AMGD--DLTAIVGAHVPQFPDGSIFYGG----GKNFVLEADEYDGCFLG 247
+S+L+++L A GD D + +G + Q DG++ GG G V EADE DG F
Sbjct: 148 SSLLSHILTVAAAGDLADPSYAIGGSI-QAADGTVLDGGHAGNGIVMVAEADESDGSFEK 206
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
SPS+A+VTN + +H+D + + + F + +++IC + + AR +L+ +
Sbjct: 207 YSPSIAIVTNAEADHLDHYGSSERYREAFVEHVSH--AINNVIICAEDEGARKVLEAMPD 264
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYG-FSSFNDWYAESVCPNVQGG---SDYILC 363
+ K ++ + D W ++ F+S ++V + IL
Sbjct: 265 NILNK----TIAYGNLDTWSMKVSSRVQKLAMFASIEHENEQAVSGREMFTLVLPEKILD 320
Query: 364 ERGR--PLAQISLQIPGVHNVLN-SLAVIATVLTLIG--DKRQSHESIACLKLPLSKFMG 418
E + Q+SL IPG+HN LN S A++A VL + D +S ES F G
Sbjct: 321 EHAKCSNKVQVSLLIPGLHNALNASAAIVAAVLLGMNPEDAARSAES----------FRG 370
Query: 419 VSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKD 478
SRRFD+ G + G + DD+AHHPTE+ A+L+AAR+++ + L +FQPH +SR +
Sbjct: 371 ASRRFDIRGCVDGVTVVDDYAHHPTEIAALLRAARRKYTSSTLRVLFQPHLFSRTQAFAN 430
Query: 479 DFANALSEADQVVVSAVL 496
+FA +L+ AD V+V+ +
Sbjct: 431 EFAKSLALADDVIVTGIF 448
>gi|312868758|ref|ZP_07728950.1| UDP-N-acetylmuramate--L-alanine ligase [Lactobacillus oris
PB013-T2-3]
gi|417885680|ref|ZP_12529832.1| UDP-N-acetylmuramate--L-alanine ligase [Lactobacillus oris F0423]
gi|311095744|gb|EFQ53996.1| UDP-N-acetylmuramate--L-alanine ligase [Lactobacillus oris
PB013-T2-3]
gi|341595176|gb|EGS37851.1| UDP-N-acetylmuramate--L-alanine ligase [Lactobacillus oris F0423]
Length = 435
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 144/432 (33%), Positives = 224/432 (51%), Gaps = 69/432 (15%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEG-LLEAG--------ANLH 124
K +F+GI G+G++ALA++ QG EV GSD+ ++ +G LL+AG ANL
Sbjct: 2 EKKTYYFIGIKGTGMAALARVLHDQGNEVLGSDIAKETFTQGPLLKAGIQILPFDPANLK 61
Query: 125 IGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLI 184
G +V I+GN A +D+ E+L AK +G+P+ + K + I
Sbjct: 62 EGMTV--IKGN-------------AFAEDHPEVLRAKEMGLPVLTYPEAVEKEVADHTSI 106
Query: 185 AVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGC 244
++G+HGK++T ++L++VL A+ + + ++G V + D F FV EADEY
Sbjct: 107 GIAGAHGKTSTTALLSHVLAAV-EPTSYLIGDGVGKGNDDDRF------FVFEADEYRDH 159
Query: 245 FLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 304
FL P A++TN+D++H D F+D D V+ F + +Q++ + GD R L
Sbjct: 160 FLAYHPDYAIMTNIDFDHPDYFKDIDDVRGSFETYGRQVKKA--IFAWGDDANLRKL--- 214
Query: 305 IKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE 364
D+ D + YG + +D+ AE++ GS Y
Sbjct: 215 -------------------DV-----DVPVYYYGTGADDDFRAENIR-RTPAGSTYDAYF 249
Query: 365 RGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFD 424
R R L ++ + G H++LNSLAV+A D + +K L+ F GV RRF
Sbjct: 250 RDRKLGTFTIHLYGEHSILNSLAVLAVAYMEKVD-------MDKIKQELANFSGVKRRFS 302
Query: 425 LIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANAL 484
+ + DD+AHHP E++A + AARQ+FP+K ++AVFQPHTYSRL D FA +L
Sbjct: 303 ET-DVADDKLIDDYAHHPNEIKATIDAARQKFPDKEIVAVFQPHTYSRLAAYIDGFAASL 361
Query: 485 SEADQVVVSAVL 496
S+AD+V V+ +
Sbjct: 362 SKADKVFVTPIF 373
>gi|373486918|ref|ZP_09577589.1| UDP-N-acetylmuramate/alanine ligase [Holophaga foetida DSM 6591]
gi|372010871|gb|EHP11474.1| UDP-N-acetylmuramate/alanine ligase [Holophaga foetida DSM 6591]
Length = 466
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 149/420 (35%), Positives = 214/420 (50%), Gaps = 44/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+S +A++ + G+ V+GSD+ S+ L G + IGH I+G
Sbjct: 20 IHFVGIGGIGMSGIAEVLVNLGYRVTGSDVKESATTTRLQGLGVEVQIGHGAKAIEGA-- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSA+ DN E++ A+S +P+ R LA+L IAV+GSHGK+TT S
Sbjct: 78 ----QVVVISSAVKGDNPEVVTARSAKIPVIPRGEMLAELMRMKYGIAVAGSHGKTTTTS 133
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A VL G D T ++G + + G G V EADE DG FL LSP++ V+TN
Sbjct: 134 MIAQVLSQGGIDPTIVIGGKLGTIGSNAKL-GKGPFLVAEADESDGSFLLLSPTIGVITN 192
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D EH+D ++D D + F +F ++ G L +C D L ++K+
Sbjct: 193 IDREHLDHYKDIDEILEAFAQFGNKVPFYGSLFVCMDDPNVAVLRPRLKR---------- 242
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLAQISLQ 375
++ TYG D A + VQ G + + + G L SL
Sbjct: 243 ---------------QVRTYGTHPQVDIQARDI---VQEGWRTHFKVRAFGEDLGAFSLG 284
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
+PG H VLN+LA I + L G +R+ ++ LS F G RRF G G +
Sbjct: 285 VPGHHMVLNALATIGVAMEL-GVERE------IIQASLSSFTGADRRFQKKGEKDGVLVV 337
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+ HHPTE+ A L AAR FP + ++ FQPH Y+R L ++F A +AD VV + +
Sbjct: 338 DDYGHHPTEIAATLGAARHGFPERRIVVAFQPHRYTRTQALLEEFGRAFFDADVVVFTDI 397
>gi|323137892|ref|ZP_08072967.1| UDP-N-acetylmuramate/alanine ligase [Methylocystis sp. ATCC 49242]
gi|322396895|gb|EFX99421.1| UDP-N-acetylmuramate/alanine ligase [Methylocystis sp. ATCC 49242]
Length = 469
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 153/427 (35%), Positives = 227/427 (53%), Gaps = 48/427 (11%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ L G+ V GSD ++ ++ L E GA++ IGH N+
Sbjct: 8 GPIHFVGIGGIGMSGIAEVLLNLGYTVQGSDASENANVKRLSEKGASVFIGHDAKNL--G 65
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D + VV S+AI +DN E+ A+ +P+ +R LA+L +A++G+HGK+TT
Sbjct: 66 DAA----VVVVSTAIKRDNPELAAAREKRLPVVRRAEMLAELMRLKQCVAIAGTHGKTTT 121
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
S++A +L A G D T I G + + + G G+ V+EADE DG FL L VA+V
Sbjct: 122 TSLVATLLDAGGLDPTVINGGIINAYGTNARL-GAGEWMVVEADESDGTFLKLPADVAIV 180
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D F DA+K FR F++ + G V+C D + L+ +I+
Sbjct: 181 TNIDPEHLDHFHTFDAIKEAFRNFIENLPFYGFAVMCLDHPTVQELVGRIE--------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG-SDYILCERGRPLAQIS- 373
D ++ITYG + D V N++GG S + + R R AQ +
Sbjct: 232 ---------------DRRVITYGENPQADVRLLDV--NLEGGVSRFNVLLRDRKTAQATY 274
Query: 374 -----LQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
L +PG HN LN+ A I L Q ++ L+ F GV RRF G
Sbjct: 275 LENLVLPMPGHHNALNATAAITVAYQLGLSPDQ-------IRKALAGFGGVKRRFTRTGD 327
Query: 429 IYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
G ++DD+ HHP E+ AVL+AAR K ++AV QPH ++RL L D F+ ++AD
Sbjct: 328 WNGVQVFDDYGHHPVEIAAVLRAARASTKGK-VVAVMQPHRFTRLQSLFDGFSTCFNDAD 386
Query: 489 QVVVSAV 495
V+++ V
Sbjct: 387 VVIIADV 393
>gi|417843502|ref|ZP_12489576.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus haemolyticus
M21127]
gi|341949645|gb|EGT76248.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus haemolyticus
M21127]
Length = 475
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 146/465 (31%), Positives = 235/465 (50%), Gaps = 68/465 (14%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+ R IHF+GIGG+G+S +A++ L +G+++SGSD+ + L +AGA ++IGH
Sbjct: 11 IIPEMRRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGLVTQRLAQAGAKIYIGH 70
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
+ +I+G + VV SSAI DN E++ AK +P+ +R LA++ + IAV+
Sbjct: 71 AEEHIEG------ASVVVVSSAIKDDNPELVAAKQKRIPVIQRAQMLAEIMRFRHGIAVA 124
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEAD 239
G+HGK+TT +M++ + D P F +G + GKN + EAD
Sbjct: 125 GTHGKTTTTAMISMIYTQAKLD---------PTFVNGGLVKSAGKNAHLGASRYLIAEAD 175
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCA 298
E D FL L P V+VVTN++ +H+D +E D + +K+ + +FL + G V+C D
Sbjct: 176 ESDASFLHLQPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLPFYGLAVMCADDPVL 235
Query: 299 RSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS 358
L+ ++ + ++ITYGFS D+ E G
Sbjct: 236 MELVPKVGR-------------------------QVITYGFSEHADYRIEDYEQTGFQGH 270
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
++C + + L +PG HN LN+ A +A K + + A L+ L+ F G
Sbjct: 271 YTVICPDNERI-NVMLNVPGKHNALNATAALAVA------KEEGIGNEAILE-ALADFQG 322
Query: 419 VSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
RRFD +G + DD+ HHPTEV ++AAR+ + +K ++ VFQPH YSR
Sbjct: 323 AGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVGVTIKAAREGWGDKRIVMVFQPHRYSRTR 382
Query: 475 VLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
L DDF LS+ D +++ L ++A ++ A + +C
Sbjct: 383 DLFDDFVQVLSQVDALIM-------LDVYAAGEMPIVGADSKSLC 420
>gi|315924910|ref|ZP_07921127.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315621809|gb|EFV01773.1| UDP-N-acetylmuramate--L-alanine ligase [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 480
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 142/420 (33%), Positives = 225/420 (53%), Gaps = 41/420 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
I+F+GIGGS +S LA +A+ QGF+V+GSD+V S Y E L GA +HIG NI G+D
Sbjct: 16 IYFIGIGGSSMSGLALIAIDQGFDVAGSDIVSSKYTEKLAGKGATIHIGQRAENI-GDD- 73
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKSTTA 196
+ V ++A+ +DN E++ A ++ +P+ +R +L L++ + I V+G+HGK+TT+
Sbjct: 74 ---IDMAVFTAAVHEDNPEMIRANALDIPLVERSDYLGLLSQVFPKTIGVAGTHGKTTTS 130
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM+A +L D + +G ++ + G V+E+ EY FL + V+T
Sbjct: 131 SMIATLLHCAEMDPSVSIGGNIGVIGGNATL-GKSDYLVIESCEYVDSFLKTEHFIGVIT 189
Query: 257 NLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
N++ +H+D F+ +K F F + G ++ GDS +LD +
Sbjct: 190 NIEEDHLDYFKGGLKQIKHSFHDFGSILPPDGLMIAYGDSD---DVLDVV---------- 236
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQ 375
SDL Q +ITYG S N+W A ++ N +G + G + +L+
Sbjct: 237 -------SDLACQ-----VITYGLSDKNEWVARNITYNDEGNPFFDAYHNGTLYGRFALR 284
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
IPG HNVLN++A IA L K E+ L F G RRF+ G + G ++Y
Sbjct: 285 IPGQHNVLNAMACIACADYLNIQKETVEEA-------LDHFGGAKRRFEFRGAVGGINVY 337
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
+D+AHHPTE++ V+ A NK L V+QPH+YSR+ L D+F + + D++V+S +
Sbjct: 338 EDYAHHPTELKVVIDACLNHAHNK-LWVVYQPHSYSRIYYLFDEFVKSFEKVDKLVISEI 396
>gi|148259085|ref|YP_001233212.1| UDP-N-acetylmuramate--L-alanine ligase [Acidiphilium cryptum JF-5]
gi|326402236|ref|YP_004282317.1| UDP-N-acetylmuramate--L-alanine ligase [Acidiphilium multivorum
AIU301]
gi|166222949|sp|A5FUL1.1|MURC_ACICJ RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|146400766|gb|ABQ29293.1| UDP-N-acetylmuramate--L-alanine ligase [Acidiphilium cryptum JF-5]
gi|325049097|dbj|BAJ79435.1| UDP-N-acetylmuramate--L-alanine ligase [Acidiphilium multivorum
AIU301]
Length = 479
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 153/425 (36%), Positives = 229/425 (53%), Gaps = 44/425 (10%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGI G G+S +A++ G+ V GSDL ++ + L AG + IGH +N+ GN
Sbjct: 9 GTIHFVGIAGIGMSGIAEVLHNLGYSVQGSDLSENANVARLRAAGIPVAIGHDAANL-GN 67
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
VV S+A+P+DN E+ A+ +P+ +R L +L +A+ G+HGK+TT
Sbjct: 68 -----AQVVVVSTAVPRDNPEVQAARKRMIPVVRRAEMLGELMRLRWSVAIGGTHGKTTT 122
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
S++A VL+ G D T I G + + + GGG V+EADE DG FL L +AVV
Sbjct: 123 TSLVAAVLEGAGLDPTVINGGIINAYGTNARL-GGGDWMVVEADESDGSFLRLPAVIAVV 181
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D + +A+++ +R+F+ I G V+C D + ++ +
Sbjct: 182 TNMDPEHLDHWGSAEAMEAGYRQFVSNIPFYGFAVLCIDHPGVQRMIPDLS--------- 232
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS-DYILCE----RGRPLA 370
D+++ITYG S D AE + + G + + L E R R LA
Sbjct: 233 ---------------DHRLITYGLSPQADVRAERIMSDRNGATFEVRLSERVAGRERVLA 277
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+ L + G HNV N+LA IA IG + + E L+ L+ F GV RRF G +
Sbjct: 278 PMRLPMLGNHNVQNALAAIA-----IGIEMEVPE--VDLRAALASFRGVKRRFTKTGEVA 330
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
G + DD+ HHP E+ AVL+AARQ + +IAV QPH Y+RL L +DF +++A +V
Sbjct: 331 GITVIDDYGHHPVEIAAVLRAARQ-AGARDVIAVVQPHRYTRLATLFEDFCTCMNDAGKV 389
Query: 491 VVSAV 495
+V+ V
Sbjct: 390 IVADV 394
>gi|239787357|emb|CAX83834.1| UDP-N-acetylmuramate--alanine ligase [uncultured bacterium]
Length = 450
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 151/446 (33%), Positives = 231/446 (51%), Gaps = 40/446 (8%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
HF+GIGG G+S LA + L+Q VSGSD V S + L E GA + IGH+VS + +
Sbjct: 4 HFIGIGGIGMSGLAHILLRQHHHVSGSDAVESVTTKNLEELGATITIGHNVSAVNSD--- 60
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
+ +V SSAI DNVE+ AK +G PI KR L ++ Y IAVSGSHGK+TT +M
Sbjct: 61 --CDYIVISSAILDDNVELQKAKMLGFPILKRHQMLGEIIRGYKTIAVSGSHGKTTTTAM 118
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
+ +L D I G V F ++ G G V+E DE DG FL + P ++V+TN+
Sbjct: 119 MGALLTEAQYDPLIINGGIVNAF-GSNVSLGLGSWCVVEGDESDGSFLNMQPIISVITNI 177
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVV 318
D EH++ F+ +++++ F+ F++ + G + C D A ++ + T
Sbjct: 178 DLEHMEFFKTQESLEKAFQTFIENTSILGCTLACIDDPLAAVVIKKTPHHT--------- 228
Query: 319 SNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPG 378
IITYG S +D ++ + GS + + R + + L + G
Sbjct: 229 ---------------IITYGESENSDIRLTALDKGIT-GSYFSVKTRRKEYKNLFLPMMG 272
Query: 379 VHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDF 438
HNVLNSLA++ L D+ E+ L F GV RRF + GT+ DD+
Sbjct: 273 KHNVLNSLAIVGAGEFLDLDEDTIRET-------LKNFQGVQRRFTIRGTVNSAVFVDDY 325
Query: 439 AHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAVL-V 497
AHHP E+ V+++A+Q K ++A+ +PH YSR+ L ++A L AD +++ +
Sbjct: 326 AHHPREIETVIKSAKQYGATK-IVAIVEPHRYSRVKDLLHEYAPVLDIADDIILIPLYGA 384
Query: 498 FWLIIFAVSSFWLIMAINSVICIVRS 523
F I VSSF + ++ C+V +
Sbjct: 385 FEEPIEGVSSFAIAQQLSKPYCLVET 410
>gi|407715629|ref|YP_006836909.1| UDP-N-acetylmuramate--L-alanine ligase [Cycloclasticus sp. P1]
gi|407255965|gb|AFT66406.1| UDP-N-acetylmuramate--L-alanine ligase [Cycloclasticus sp. P1]
Length = 484
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 151/430 (35%), Positives = 216/430 (50%), Gaps = 64/430 (14%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG+G+S +A++ + G+EVSGSD+ S E L GA ++IGH N+ D
Sbjct: 21 IHFIGIGGAGMSGIAEVLINLGYEVSGSDIRNSKVTERLANQGATIYIGHMAENVDDCD- 79
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV S+A+ +DN E++ AK VP+ R LA+L IA++G+HGK+TT S
Sbjct: 80 -----VVVTSTAVQKDNAEVVAAKEQRVPVIPRAEMLAELMRFRFGIAIAGTHGKTTTTS 134
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEADEYDGCFLGLS 249
+LA ++ G P F G + G N V EADE D FL L
Sbjct: 135 LLAVLMTE---------GQLDPTFVIGGLLNSAGSNAKLGESHYLVAEADESDASFLHLQ 185
Query: 250 PSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQD 308
P +AVVTN+D +H+ + D VK F+ FL Q+ G V+C D + R L I +
Sbjct: 186 PMIAVVTNIDEDHMSTYGGDFQQVKDAFQSFLHQLPFYGLAVMCVDDENIRELAPSIGK- 244
Query: 309 TGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP 368
I++YG D+ A +V +G + +R
Sbjct: 245 ------------------------PILSYGIDQAADFQALNV--KQEGFRTHFNLKRLGN 278
Query: 369 LAQ--ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
Q ++L +PG HNVLN+LA IA L S E+IA L+ F GV RRF +
Sbjct: 279 KGQLPLTLNMPGKHNVLNALAAIAVASEL----GVSDEAIAS---GLNHFKGVGRRFQVN 331
Query: 427 GTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFAN 482
G I + DD+ HHP EV A ++A R+ + +K L+ VFQPH YSR + +DF +
Sbjct: 332 GEIKREGGSALLVDDYGHHPREVIATIKAVREGWSDKRLVLVFQPHRYSRTHDMFEDFVD 391
Query: 483 ALSEADQVVV 492
L+E D +V+
Sbjct: 392 VLNEVDVLVL 401
>gi|283456395|ref|YP_003360959.1| UDP-N-acetylmuramate--alanine ligase [Bifidobacterium dentium Bd1]
gi|283103029|gb|ADB10135.1| UDP-N-acetylmuramate--alanine ligase [Bifidobacterium dentium Bd1]
Length = 521
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 149/444 (33%), Positives = 225/444 (50%), Gaps = 59/444 (13%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G HF+GIGG+G+S LA++ +QG V GSD S+ E L G + G N++G
Sbjct: 30 GKTHFIGIGGAGMSVLAEMLHEQGVHVDGSDREPSAKTERLQGLGIAVEFGQRAENVEG- 88
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
VV SSAI DN EI+ A G I R LA L + + V+G+HGK+TT
Sbjct: 89 -----ARTVVFSSAIKPDNPEIVAAYEAGERIVHRSDILALLMQSKRAVTVAGAHGKTTT 143
Query: 196 ASMLAYVLKAMGD----DLTAIVGAHVPQFPDGSIFYGG--GKNFVL--EADEYDGCFLG 247
+SMLA++L G+ D + +G + Q DG+ GG GK VL EADE DG F
Sbjct: 144 SSMLAHILVNAGEGELADPSYAIGGSI-QGKDGATLDGGHAGKGSVLVAEADESDGSFAK 202
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVI-CGDSQCARSLLDQIK 306
P +A++TN + +H+D + E ++ F ++ G VI CGD A ++L +K
Sbjct: 203 YHPEIAIITNAEADHLDHYGTEAKYRAAF---VEHAGCAGKAVIMCGDDDGALAVLRALK 259
Query: 307 QDTGLKYSGGVVSNQSS----DLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYIL 362
+ V S Q S DL G H +I ES + Q G+++ +
Sbjct: 260 TEVARHVV--VYSTQPSEDLGDLNGAAH-VRI-------------ESESESTQSGAEHFI 303
Query: 363 C----------ERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLP 412
ER P ++L +PG+HN N+ A + + L D ++
Sbjct: 304 LHLPAGLVDVEERRVP---VTLTVPGIHNARNATAALLAAVMLGVDVERA-------AAA 353
Query: 413 LSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSR 472
+ F+G +RRF + G++ + DD+AHHPTE+ A+L AAR+R+P + +FQPH +SR
Sbjct: 354 ATSFLGAARRFQIRGSVNQVTVIDDYAHHPTEIAALLDAARRRYPEAGIHVIFQPHLFSR 413
Query: 473 LVVLKDDFANALSEADQVVVSAVL 496
+ +FA AL++AD V+V+ +
Sbjct: 414 TMFFAREFAEALAKADDVIVTGIF 437
>gi|407693007|ref|YP_006817796.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus suis
H91-0380]
gi|407389064|gb|AFU19557.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus suis
H91-0380]
Length = 475
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 146/473 (30%), Positives = 236/473 (49%), Gaps = 68/473 (14%)
Query: 60 TFKRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEA 119
F+ + +V R IHF+GIGG+G+S +A++ L +G+++SGSD+ + L+EA
Sbjct: 3 NFQDKVKKLVPEMRRVNQIHFIGIGGAGMSGIAEVLLNEGYQISGSDIAEGPVTKRLVEA 62
Query: 120 GANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE 179
GA + IGH NI G + VVASSAI N E+ AK +P+ +R LA++
Sbjct: 63 GAKVFIGHQAENIIG------ASVVVASSAIDDTNPEVKAAKEARIPVIQRAQMLAEIMR 116
Query: 180 KYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN------ 233
+ IA++G+HGK+TT +M++ + D P F +G + GKN
Sbjct: 117 FRHGIAIAGTHGKTTTTAMISMIYTEAQLD---------PTFVNGGLVKSAGKNAHLGAS 167
Query: 234 --FVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLV 290
+ EADE D FL L P V+VVTN++ +H+D + D + +K+ + +FL+ + G V
Sbjct: 168 RYLIAEADESDASFLHLQPMVSVVTNIEPDHMDTYGGDFEQMKATYVKFLRNLPFYGLAV 227
Query: 291 ICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESV 350
+C D + + Q+ + +++TYGFS D+ E
Sbjct: 228 MCADDETVMEIAPQVGR-------------------------QVVTYGFSDKADYRIEDY 262
Query: 351 CPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLK 410
G ++C G + + L +PG HN LN+ A +A K + + A L
Sbjct: 263 QQTGFQGHYTVVCPNGERI-DVLLNVPGKHNALNATAALAVA------KEEGIGNEAILS 315
Query: 411 LPLSKFMGVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQ 466
L+ F G RRFD +G+ + + DD+ HHPTEV ++AAR + +K ++ +FQ
Sbjct: 316 -ALADFQGAGRRFDQLGSFIRPNGKVMLVDDYGHHPTEVDVTIKAARSGWEDKRVVMIFQ 374
Query: 467 PHTYSRLVVLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
PH YSR L DDF LS+ D +++ L ++A ++ A + +C
Sbjct: 375 PHRYSRTRDLFDDFVQVLSQVDALIM-------LEVYAAGEAPIVGADSKALC 420
>gi|423093680|ref|ZP_17081476.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas fluorescens
Q2-87]
gi|397887960|gb|EJL04443.1| UDP-N-acetylmuramate--alanine ligase [Pseudomonas fluorescens
Q2-87]
Length = 486
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 150/424 (35%), Positives = 213/424 (50%), Gaps = 47/424 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G++VSGSDL S E L GA + IGH N D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYQVSGSDLKASPVTERLESFGAQIFIGHRAENAANAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSA+ N E+ A +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 78 -----VLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LIASVFAAGGLDPTFVIGGRL-NAAGTNAQLGTSRYLIAEADESDASFLHLQPLVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ ++ D + +K F FL + G V+C D R +L IK+ T
Sbjct: 192 IDADHMATYDGDFNKLKKTFVEFLHNLPFYGLAVVCLDDPVVREILPLIKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER-GRPLAQISLQ 375
+TYGF D A +V QG + R R +S+
Sbjct: 245 ------------------VTYGFGEDVDVRAINV--RQQGMQTFFTVLRPDREPLDVSVN 284
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----G 431
+PG HNVLN+LA I + D+ ++I LS F GV RRF + G +
Sbjct: 285 MPGNHNVLNALATIC----IATDEGVGDDAIVQ---GLSGFQGVGRRFQVYGELPVDGGN 337
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+ HHPTEV AV++A R +P + L+ V+QPH YSR L DDF L++A+ ++
Sbjct: 338 VMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVQVLADANVLL 397
Query: 492 VSAV 495
+ V
Sbjct: 398 LMEV 401
>gi|255657475|ref|ZP_05402884.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium difficile
QCD-23m63]
gi|296449070|ref|ZP_06890860.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium difficile
NAP08]
gi|296879893|ref|ZP_06903866.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium difficile
NAP07]
gi|296262163|gb|EFH08968.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium difficile
NAP08]
gi|296429182|gb|EFH15056.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium difficile
NAP07]
Length = 450
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 222/420 (52%), Gaps = 42/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG +SALA++ + +G++VSGSD S ++ L + GA ++IG NI +
Sbjct: 3 IHFIGIGGISMSALAEICINKGYQVSGSDSNESYLLDKLRDQGATIYIGQKKDNISDD-- 60
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKSTTA 196
N VV ++A+ DN E++ AK + R +L ++ +Y N IAVSG+HGK++T
Sbjct: 61 ---VNMVVYTAAVHPDNEELVAAKEKNKLVMNRATFLGQIMREYKNSIAVSGTHGKTSTT 117
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SML+ + + D T +VG ++ G++ G +F+ EA EY FL +P +++V
Sbjct: 118 SMLSTIFEYADLDPTILVGGNLSMIG-GNVKIGNSNHFITEACEYVDSFLNFNPKISIVL 176
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F D +K+ F +F K + G+ +I GD + +L +K
Sbjct: 177 NVEEDHLDYFSGIDEIKASFNKFGKLLPPEGYFIINGDDENIDDILYDVKA--------- 227
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
II YG S ND + + + G + + +GR L + L +
Sbjct: 228 ----------------TIIKYGRDSDNDAVIKDIHFDNSGHGIFRIEYQGRDLGEFELSV 271
Query: 377 PGVHNVLN-SLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
G+HN+ N S A++A +++ I + ++ + + GV RRF+ G +
Sbjct: 272 YGLHNIYNASSAIMAALVSGI--------DLETIRKNIKIYKGVGRRFETKGYYKNALVV 323
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHPTE++A L AA+ + L +FQPHTY+R L +F+ A AD+V+++ +
Sbjct: 324 DDYAHHPTELKATLAAAK-KLKKSTLWCIFQPHTYTRTKSLLGEFSEAFYAADKVIITDI 382
>gi|375089728|ref|ZP_09736053.1| UDP-N-acetylmuramate-alanine ligase [Facklamia languida CCUG 37842]
gi|374566575|gb|EHR37814.1| UDP-N-acetylmuramate-alanine ligase [Facklamia languida CCUG 37842]
Length = 444
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 145/421 (34%), Positives = 225/421 (53%), Gaps = 57/421 (13%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
N+ HFVGI GSG+SALA + +G+ V GSD+ + + LE + + NI
Sbjct: 3 NKDTIYHFVGIKGSGMSALALILHGEGYRVQGSDVGKYFFTQQELERQHIKLMDFTPENI 62
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
+ ++A +A ++ E++ A+S+ +PIY+ +L L E+Y +AV+GSHGK
Sbjct: 63 TED------LTIIAGNAFDDNHPELVKARSLNLPIYRYHDFLGDLIERYTSVAVTGSHGK 116
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--FVLEADEYDGCFLGLSP 250
++T +LA+ LK + L+ ++G DG+ YG K FVLEA EY FL P
Sbjct: 117 TSTTGLLAHTLKQLAP-LSYLIG-------DGT-GYGDEKADYFVLEACEYRRHFLAYQP 167
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
A++TN+D++H D ++ D V + F+ F Q + G ++ CG+ S L Q++ D
Sbjct: 168 DYAIITNVDFDHPDYYQSIDDVFNAFQVFASQAKKG--IIACGED----SYLAQLEVDHP 221
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
+ Y YGFS + YA ++ N + GS++ + G+
Sbjct: 222 IYY-----------------------YGFSPDHTIYAANIDRN-EAGSNFEVFIEGKLFG 257
Query: 371 QISLQIPGVHNVLNSLAVIATV-LTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
+ L G HN+LN+L+VIA + L G K + L+ F GV RRF +
Sbjct: 258 EFYLPSYGEHNILNALSVIAFLYLEGFGAKE--------IATHLATFQGVKRRFSE-KKV 308
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
+ DD+AHHP+E+RA + AA+Q++PN+ ++A+FQPHT+SR V L DFA ALS AD
Sbjct: 309 QNLIMIDDYAHHPSEIRATIDAAKQKYPNRKVVAIFQPHTFSRTVALLKDFAEALSLADH 368
Query: 490 V 490
V
Sbjct: 369 V 369
>gi|339484871|ref|YP_004696657.1| UDP-N-acetylmuramate--L-alanine ligase [Nitrosomonas sp. Is79A3]
gi|338807016|gb|AEJ03258.1| UDP-N-acetylmuramate--L-alanine ligase [Nitrosomonas sp. Is79A3]
Length = 475
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 139/431 (32%), Positives = 222/431 (51%), Gaps = 43/431 (9%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K++ IHFVGIGG+G+S +A++ + G++VSGSDL+ + + L G ++ GH+
Sbjct: 1 MKHKVKHIHFVGIGGAGMSGIAEVFVNLGYQVSGSDLMDNQVTQRLARLGIKVYAGHTSQ 60
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
I G D VV S+A+ DN E++ AK+ +P+ R LA+L + IA++G+H
Sbjct: 61 QIAGAD------VVVISTAVKPDNPEVIAAKNKNIPVVPRALMLAELLRLRSGIAIAGTH 114
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S++A +L A D T ++G + + G G+ V+EADE D FL L P
Sbjct: 115 GKTTTTSLIASILAAADMDPTFVIGGKL-EAAGCHAKLGSGEFIVVEADESDASFLYLQP 173
Query: 251 SVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
+ VVTN+D +H++ + D + +K F F++ + G V+C D R ++ I
Sbjct: 174 VLTVVTNIDADHMETYGHDFNRLKQTFVEFVQHLPFYGMAVVCVDDANVREVMPAI---- 229
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPL 369
+ +G D ++ N + V G + +
Sbjct: 230 ----------TKPITTYGLSEDAQVRAINIQHDNHQMRFTAVVGVNGSARNL-------- 271
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
+I+L +PG+HN+ N+LA IA V IG +A +K LS+F GV RRF L I
Sbjct: 272 -EITLNLPGLHNIQNALAAIA-VANEIGVP-----DVAIVK-ALSEFKGVERRFQLYEEI 323
Query: 430 Y-----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANAL 484
+ DD+ HHP E+ A ++AAR FP + L+ FQPH Y+R + +DF L
Sbjct: 324 KLSIQKSFTLVDDYGHHPAEMEATIKAARGAFPGRRLVVAFQPHRYTRTRDVFEDFTRVL 383
Query: 485 SEADQVVVSAV 495
S+ D ++++ V
Sbjct: 384 SQVDVLLLTEV 394
>gi|171742518|ref|ZP_02918325.1| hypothetical protein BIFDEN_01630 [Bifidobacterium dentium ATCC
27678]
gi|171278132|gb|EDT45793.1| putative UDP-N-acetylmuramate--L-alanine ligase [Bifidobacterium
dentium ATCC 27678]
Length = 532
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 147/443 (33%), Positives = 224/443 (50%), Gaps = 57/443 (12%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G HF+GIGG+G+S LA++ +QG V GSD S+ E L G + G N++G
Sbjct: 41 GKTHFIGIGGAGMSVLAEMLHEQGVHVDGSDREPSAKTERLQGLGIAVEFGQRAENVEG- 99
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
VV SSAI DN EI+ A G I R LA L + + V+G+HGK+TT
Sbjct: 100 -----ARTVVFSSAIKPDNPEIVAAYEAGERIVHRSDILALLMQSKRAVTVAGAHGKTTT 154
Query: 196 ASMLAYVLKAMGD----DLTAIVGAHVPQFPDGSIFYGG--GKNFVL--EADEYDGCFLG 247
+SMLA++L G+ D + +G + Q DG+ GG GK VL EADE DG F
Sbjct: 155 SSMLAHILVNAGEGELADPSYAIGGSI-QGKDGATLDGGHAGKGSVLVAEADESDGSFAK 213
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P +A++TN + +H+D + E ++ F G +++CGD A ++L +K
Sbjct: 214 YHPEIAIITNAEADHLDHYGTEAKYRAAFVEHAGC--AGKAVIMCGDDDGALAVLRALKT 271
Query: 308 DTGLKYSGGVVSNQSS----DLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILC 363
+ V S Q S DL G H +I ES + Q G+++ +
Sbjct: 272 EVARHVV--VYSTQPSEDLGDLNGAAH-VRI-------------ESESESTQSGAEHFIL 315
Query: 364 ----------ERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPL 413
ER P ++L +PG+HN N+ A + + L D ++
Sbjct: 316 HLPAGLVDVEERRVP---VTLTVPGIHNARNATAALLAAVMLGVDVERA-------AAAA 365
Query: 414 SKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRL 473
+ F+G +RRF + G++ + DD+AHHPTE+ A+L AAR+R+P + +FQPH +SR
Sbjct: 366 TSFLGAARRFQIRGSVNQVTVIDDYAHHPTEIAALLDAARRRYPEAGIHVIFQPHLFSRT 425
Query: 474 VVLKDDFANALSEADQVVVSAVL 496
+ +FA AL++AD V+V+ +
Sbjct: 426 MFFAREFAEALAKADDVIVTGIF 448
>gi|89074169|ref|ZP_01160668.1| UDP-N-acetylmuramate--L-alanine ligase [Photobacterium sp. SKA34]
gi|89050105|gb|EAR55631.1| UDP-N-acetylmuramate--L-alanine ligase [Photobacterium sp. SKA34]
Length = 487
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 142/432 (32%), Positives = 213/432 (49%), Gaps = 61/432 (14%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG+G+S +A++ + +G+ +SGSD+ ++ L GA + GHS NIQ
Sbjct: 21 RVERIHFVGIGGAGMSGIAEVLVNEGYRISGSDIAPNAVTNRLTAKGAEIFFGHSAENIQ 80
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
G + VVAS+AI ++N E++ A +PI +R LA+L + IA++G+HGK+
Sbjct: 81 G------ASVVVASTAISKENPELVAATESRIPIVRRAEMLAELMRYRHGIAIAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEADEYDGCF 245
TT ++ + G D P F +G + G N + EADE D F
Sbjct: 135 TTTALTTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGCSRYLIAEADESDASF 185
Query: 246 LGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 304
L L P V VVTN++ +H+D + D + +K F FL + G V+C D R LL +
Sbjct: 186 LHLQPMVCVVTNIEADHMDTYGGDFEVLKQTFIDFLHNLPFYGLAVMCIDDPVVRELLPR 245
Query: 305 IKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE 364
+ + +ITYGF+ D + G + +
Sbjct: 246 VGR-------------------------PMITYGFAEDADVRITNYTQTGHQGH-FTVLR 279
Query: 365 RGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFD 424
+ +P I+L PG HN LN+ A IA + + A ++ L +F G RRFD
Sbjct: 280 KDKPALNITLNTPGKHNALNATAAIAVA------TEEGVDDEAIMR-ALIEFEGTGRRFD 332
Query: 425 LIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
+G + DD+ HHP+EV +QAAR + +K L+ +FQPH YSR L DDF
Sbjct: 333 HLGEFETGNGNVMLVDDYGHHPSEVDVTIQAARAGWADKRLVMIFQPHRYSRTRDLYDDF 392
Query: 481 ANALSEADQVVV 492
AN L + D +V+
Sbjct: 393 ANVLEQVDVLVM 404
>gi|296134865|ref|YP_003642107.1| UDP-N-acetylmuramate--L-alanine ligase [Thiomonas intermedia K12]
gi|295794987|gb|ADG29777.1| UDP-N-acetylmuramate/alanine ligase [Thiomonas intermedia K12]
Length = 469
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 147/429 (34%), Positives = 219/429 (51%), Gaps = 53/429 (12%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ G+ +SGSDL S+ + L E G + IGH +++Q D
Sbjct: 8 IHFVGIGGAGMSGIAEVLHNLGYAISGSDLNESATVRRLRELGLRVAIGHDAAHVQDAD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
AVV S+A+ DN E+L A++ +P+ R LA+L IA++G+HGK+TT S
Sbjct: 67 -----AVVVSTAVRADNPEVLAARARHIPVVPRAVMLAELMRLKRGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL G D T ++G + + G G+ V+EADE D FL L P +AVVTN
Sbjct: 122 LVASVLAEGGLDPTFVIGGRLNSAGVNAKL-GQGEYIVVEADESDASFLNLLPVMAVVTN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D ++ F F+ ++ G V+C D R ++ + +
Sbjct: 181 IDADHMDTYGHDPARLRHAFVDFIARLPFYGAAVLCVDDAAVRGIMPFVSK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR-----PLAQ 371
I +YGF+ D ++ +G + R PLA
Sbjct: 232 ----------------PITSYGFA--EDAQVRAIDVRAEGAQMHFTVLRRNGVQLPPLA- 272
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG 431
++L +PG HNV N+LA IA L D A ++ L+ F GV RRF G +
Sbjct: 273 VTLNLPGRHNVQNALAAIAVATELNVDD-------AAIQRALAGFTGVGRRFQRYGEVAA 325
Query: 432 CH-----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
H + DD+ HHP E+ A L AAR FP + L+ FQPH Y+R L +DF L E
Sbjct: 326 HHGGHFTLIDDYGHHPVEMAATLAAARGAFPGRRLVLAFQPHRYTRTRDLFEDFVKVLGE 385
Query: 487 ADQVVVSAV 495
AD V+++ V
Sbjct: 386 ADAVLLAEV 394
>gi|110598580|ref|ZP_01386848.1| UDP-N-acetylmuramate--alanine ligase [Chlorobium ferrooxidans DSM
13031]
gi|110339814|gb|EAT58321.1| UDP-N-acetylmuramate--alanine ligase [Chlorobium ferrooxidans DSM
13031]
Length = 471
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 145/421 (34%), Positives = 224/421 (53%), Gaps = 44/421 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H VGIGG+G+SA+A+L LK GF V+GSD+ + L+E GA ++ GH + D
Sbjct: 9 VHIVGIGGAGMSAIAELLLKSGFGVTGSDVSTGEVTDKLVEHGAVIYQGHRAEQVTACD- 67
Query: 138 SRFPNAVVASSAIPQD-NVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
VV SSAI Q+ NVEI+ A+ G+P+ KRD L +L + I +SG+HGK+TT
Sbjct: 68 -----VVVYSSAIRQEENVEIIAARKAGIPVIKRDEMLGELMRYKSGICISGTHGKTTTT 122
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
+M+A +L G+ T ++G + + GS G GK V+EADE+D FL L+P++A+V
Sbjct: 123 AMIATMLIESGESPTVMIGG-ISDYLKGSTVVGEGKYMVIEADEFDRAFLKLTPTIAIVN 181
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+L+ EH+D + D +K F F ++ G ++ C D R ++ +
Sbjct: 182 SLESEHMDTYGTLDDLKQAFIAFANKVPFYGRVICCVDWPEIRKIIPSL----------- 230
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
D T+G D A + Q S + + G +S+ +
Sbjct: 231 --------------DRVYTTFGIEEPADVMAYDIVLEKQR-STFTVRAFGIEYRDVSINV 275
Query: 377 PGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDL-IGTIYGCHI 434
PG HNVLN+LA +T L L I +R L + L+ + G+ RRF + G +
Sbjct: 276 PGRHNVLNALAAFSTGLELGIAPER--------LIVGLACYSGMRRRFQVKFDNGKGLMV 327
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSA 494
DD+AHHP+EV+A ++AA+ + + ++AVFQPH +SR D++ ALS AD V ++
Sbjct: 328 VDDYAHHPSEVKATVKAAKSGWVDSRVVAVFQPHLFSRTKEFADEYGWALSRADIVFIAD 387
Query: 495 V 495
V
Sbjct: 388 V 388
>gi|338981006|ref|ZP_08632246.1| MurC [Acidiphilium sp. PM]
gi|338208076|gb|EGO95971.1| MurC [Acidiphilium sp. PM]
Length = 479
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 153/425 (36%), Positives = 229/425 (53%), Gaps = 44/425 (10%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGI G G+S +A++ G+ V GSDL ++ + L AG + IGH +N+ GN
Sbjct: 9 GTIHFVGIAGIGMSGIAEVLHNLGYSVQGSDLSENANVARLRAAGIPVAIGHDAANL-GN 67
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
VV S+A+P+DN E+ A+ +P+ +R L +L +A+ G+HGK+TT
Sbjct: 68 -----AQVVVVSTAVPRDNPEVQAARKRMIPVVRRAEMLGELMRLRWSVAIGGTHGKTTT 122
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
S++A VL+ G D T I G + + + GGG V+EADE DG FL L +AVV
Sbjct: 123 TSLVAAVLEGAGLDPTVINGGIINAYGTNARL-GGGDWMVVEADESDGSFLRLPAVIAVV 181
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D + +A+++ +R+F+ I G V+C D + ++ +
Sbjct: 182 TNMDPEHLDHWGSAEAMEAGYRQFVSNIPFYGFAVLCIDHPGVQRMIPDLS--------- 232
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS-DYILCE----RGRPLA 370
D+++ITYG S D AE + + G + + L E R R LA
Sbjct: 233 ---------------DHRLITYGLSPQADVRAERIMSDRNGATFEVRLSERVAGRERVLA 277
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+ L + G HNV N+LA IA IG + + E L+ L+ F GV RRF G +
Sbjct: 278 PMRLPMLGNHNVQNALAAIA-----IGIEMEVPE--VDLRAALASFRGVKRRFTKTGEVA 330
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
G + DD+ HHP E+ AVL+AARQ + +IAV QPH Y+RL L +DF +++A +V
Sbjct: 331 GITVIDDYGHHPVEIAAVLRAARQ-AGARDVIAVVQPHRYTRLATLFEDFCTCMNDAGKV 389
Query: 491 VVSAV 495
+V+ V
Sbjct: 390 IVADV 394
>gi|442805922|ref|YP_007374071.1| UDP-N-acetylmuramate--L-alanine ligase MurC [Clostridium
stercorarium subsp. stercorarium DSM 8532]
gi|442741772|gb|AGC69461.1| UDP-N-acetylmuramate--L-alanine ligase MurC [Clostridium
stercorarium subsp. stercorarium DSM 8532]
Length = 467
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 143/420 (34%), Positives = 215/420 (51%), Gaps = 42/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H VGIGG +S L+++ L G V+GSD+ S +E L + + SNI D
Sbjct: 13 VHMVGIGGISMSGLSEILLSMGIHVTGSDVKNSPIVERLKLKNVPVFLKQEPSNITNQD- 71
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTTA 196
VV ++A+P D+ E+ A+ G+P+ R L ++ Y IAVSG+HGK+TT
Sbjct: 72 -----LVVYTAAMPTDHPELEAARKKGIPVIDRATLLGEIMRSYKKSIAVSGTHGKTTTT 126
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM++Y L D T +G V G+ G + FV EA EY FL L+P +AV+
Sbjct: 127 SMISYCLMEAEKDPTVHIGG-VFDVIGGTTRVGSSEFFVTEACEYKDSFLKLNPYMAVIL 185
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F D + + + F +F + G ++ D++ +L Q+K T
Sbjct: 186 NIEPDHLDYFHDINQIVNSFSKFAGSVPSDGFVIGNADNEHVLRILGQLKCRT------- 238
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFND-WYAESVCPNVQGGSDYILCERGRPLAQISLQ 375
ITYG +S W A ++ + G + + + + ++ L
Sbjct: 239 ------------------ITYGLTSPKAYWTARNITFDENGFPSFRVVCGKKSIMRMKLS 280
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
IPG+HNV NSLA IA L + + ++ L KF G RRF+L GTI G +
Sbjct: 281 IPGLHNVSNSLACIAACNAL-------NIPLDIVQNSLRKFKGTRRRFELKGTIDGIKVV 333
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHPTEV A L++AR K L VFQPHTY+R L D+F+ A + AD+V V+ +
Sbjct: 334 DDYAHHPTEVIATLKSARSCTRGKVL-CVFQPHTYTRTKELIDEFSKAFTLADKVYVTDI 392
>gi|161485639|ref|NP_563409.2| UDP-N-acetylmuramate--L-alanine ligase [Clostridium perfringens
str. 13]
Length = 466
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 136/426 (31%), Positives = 223/426 (52%), Gaps = 48/426 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K+ +HF+GIGG +S LA + L G++VSGSD S L E GA ++IGHS
Sbjct: 15 LKDINKKVHFIGIGGVSMSGLAAVLLNAGYKVSGSDSKESEITNRLKEEGAKIYIGHSKD 74
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAVSG 188
N+Q D VV ++AIP DN EI+ AK + + R +L ++ + K+N +AV+G
Sbjct: 75 NLQDVD------VVVYTAAIPSDNPEIIKAKEDNLILMDRAEFLGQIMKGHKFN-VAVAG 127
Query: 189 SHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGL 248
+HGK+TT SM+++V + D T +VG + G+ G + F+ EA EY FL
Sbjct: 128 THGKTTTTSMISHVALSADLDPTILVGGDL-DIIHGNFRVGNSEYFITEACEYKQSFLRF 186
Query: 249 SPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQD 308
P V ++ N+D +H+D ++D + +K F++F++ I G+++ D + +L+ K +
Sbjct: 187 FPYVGIILNIDADHLDFYKDINHIKDTFKQFVRLIPNDGYIIGNADDEKVMEVLEVAKCN 246
Query: 309 TGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP 368
++TYG ++ D A ++ N +G + + +
Sbjct: 247 -------------------------VLTYGINN-GDIQARNIEFNEKGCATFDVFRNEEK 280
Query: 369 LAQISLQIPGVHNVLNSLAVI--ATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
L +SL +PG+HNV NSL+ + A + + D S LS F G +RF+
Sbjct: 281 LLSLSLNVPGMHNVSNSLSAVCLAEIFNINADSIVS---------GLSSFGGAHKRFEYK 331
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
GT + DD+AHHP E++A L A++ N+ ++ VFQPHTY+R L +DF +
Sbjct: 332 GTKNDITVIDDYAHHPVEIKATLSTAKKMNHNR-IVCVFQPHTYTRTKTLFNDFVKCFDD 390
Query: 487 ADQVVV 492
D++V+
Sbjct: 391 CDELVL 396
>gi|126701142|ref|YP_001090039.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium difficile 630]
gi|254977143|ref|ZP_05273615.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium difficile
QCD-66c26]
gi|255094472|ref|ZP_05323950.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium difficile CIP
107932]
gi|255102728|ref|ZP_05331705.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium difficile
QCD-63q42]
gi|255308549|ref|ZP_05352720.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium difficile ATCC
43255]
gi|255316223|ref|ZP_05357806.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium difficile
QCD-76w55]
gi|255518885|ref|ZP_05386561.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium difficile
QCD-97b34]
gi|255652064|ref|ZP_05398966.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium difficile
QCD-37x79]
gi|260685038|ref|YP_003216323.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium difficile
CD196]
gi|260688696|ref|YP_003219830.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium difficile
R20291]
gi|306521800|ref|ZP_07408147.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium difficile
QCD-32g58]
gi|384362712|ref|YP_006200564.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium difficile BI1]
gi|423080848|ref|ZP_17069465.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium difficile
002-P50-2011]
gi|423087249|ref|ZP_17075638.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium difficile
050-P50-2011]
gi|423090619|ref|ZP_17078908.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium difficile
70-100-2010]
gi|123066482|sp|Q181B7.1|MURC_CLOD6 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|115252579|emb|CAJ70422.1| UDP-N-acetylmuramate--L-alanine ligase
(UDP-N-acetylmuramoyl-L-alanine synthetase) [Clostridium
difficile 630]
gi|260211201|emb|CBA66689.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium difficile
CD196]
gi|260214713|emb|CBE07377.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium difficile
R20291]
gi|357545187|gb|EHJ27167.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium difficile
050-P50-2011]
gi|357552337|gb|EHJ34111.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium difficile
002-P50-2011]
gi|357556323|gb|EHJ37938.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium difficile
70-100-2010]
Length = 450
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 221/420 (52%), Gaps = 42/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG +SALA++ + +G++VSGSD S ++ L + GA ++IG NI +
Sbjct: 3 IHFIGIGGISMSALAEICINKGYQVSGSDSNESYLLDKLRDQGATIYIGQKKDNISDD-- 60
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKSTTA 196
N VV ++A+ DN E++ AK + R +L ++ +Y N IAVSG+HGK++T
Sbjct: 61 ---VNMVVYTAAVHPDNEELVAAKEKNKLVMNRATFLGQIMREYKNSIAVSGTHGKTSTT 117
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SML+ + + D T +VG ++ G++ G +F+ EA EY FL +P +++V
Sbjct: 118 SMLSTIFEYADLDPTILVGGNLSMIG-GNVKIGNSNHFITEACEYVDSFLNFNPKISIVL 176
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F D +K+ F +F K + G+ +I GD + +L +K
Sbjct: 177 NVEEDHLDYFSGIDEIKASFNKFGKLLPPEGYFIINGDDENIDDILYDVKA--------- 227
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
II YG S ND + + + G + + GR L + L +
Sbjct: 228 ----------------TIIKYGRDSDNDAVIKDIHFDNSGHGIFRIEYEGRDLGEFELSV 271
Query: 377 PGVHNVLN-SLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
G+HN+ N S A++A +++ I + ++ + + GV RRF+ G +
Sbjct: 272 YGLHNIYNASSAIMAALVSGI--------DLETIRKNIKIYKGVGRRFETKGYYKNALVV 323
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHPTE++A L AA+ + L +FQPHTY+R L +F+ A AD+V+++ +
Sbjct: 324 DDYAHHPTELKATLAAAK-KLKKSTLWCIFQPHTYTRTKSLLGEFSEAFYAADKVIITDI 382
>gi|25008803|sp|Q8XHJ0.2|MURC_CLOPE RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
Length = 457
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 136/426 (31%), Positives = 223/426 (52%), Gaps = 48/426 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K+ +HF+GIGG +S LA + L G++VSGSD S L E GA ++IGHS
Sbjct: 6 LKDINKKVHFIGIGGVSMSGLAAVLLNAGYKVSGSDSKESEITNRLKEEGAKIYIGHSKD 65
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAVSG 188
N+Q D VV ++AIP DN EI+ AK + + R +L ++ + K+N +AV+G
Sbjct: 66 NLQDVD------VVVYTAAIPSDNPEIIKAKEDNLILMDRAEFLGQIMKGHKFN-VAVAG 118
Query: 189 SHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGL 248
+HGK+TT SM+++V + D T +VG + G+ G + F+ EA EY FL
Sbjct: 119 THGKTTTTSMISHVALSADLDPTILVGGDL-DIIHGNFRVGNSEYFITEACEYKQSFLRF 177
Query: 249 SPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQD 308
P V ++ N+D +H+D ++D + +K F++F++ I G+++ D + +L+ K +
Sbjct: 178 FPYVGIILNIDADHLDFYKDINHIKDTFKQFVRLIPNDGYIIGNADDEKVMEVLEVAKCN 237
Query: 309 TGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP 368
++TYG ++ D A ++ N +G + + +
Sbjct: 238 -------------------------VLTYGINN-GDIQARNIEFNEKGCATFDVFRNEEK 271
Query: 369 LAQISLQIPGVHNVLNSLAVI--ATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
L +SL +PG+HNV NSL+ + A + + D S LS F G +RF+
Sbjct: 272 LLSLSLNVPGMHNVSNSLSAVCLAEIFNINADSIVS---------GLSSFGGAHKRFEYK 322
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
GT + DD+AHHP E++A L A++ N+ ++ VFQPHTY+R L +DF +
Sbjct: 323 GTKNDITVIDDYAHHPVEIKATLSTAKKMNHNR-IVCVFQPHTYTRTKTLFNDFVKCFDD 381
Query: 487 ADQVVV 492
D++V+
Sbjct: 382 CDELVL 387
>gi|319760287|ref|YP_004124225.1| UDP-N-acetylmuramate--L-alanine ligase [Candidatus Blochmannia
vafer str. BVAF]
gi|318039001|gb|ADV33551.1| UDP-N-acetylmuramate--alanine ligase [Candidatus Blochmannia vafer
str. BVAF]
Length = 482
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 145/428 (33%), Positives = 215/428 (50%), Gaps = 50/428 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG+G+S +A + QG+ V+GSD+ S + LL G + GH N+ D
Sbjct: 22 IHFIGIGGAGMSGIAIILAHQGYNVTGSDIEESDITQYLLNLGVKIFFGHCSENVNNAD- 80
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSAI +N+E AK + +PI +R L +L IA++G+HGK+TT +
Sbjct: 81 -----LVVISSAINLNNIEFQAAKRLKIPIMRRAEVLFELMRYKYGIAIAGTHGKTTTTA 135
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
MLA + G D T I GA + S F G F++EADE D FL L P+V ++TN
Sbjct: 136 MLANIYVEAGLDPTFINGAIIRSEGVQSRF-GCSCYFIIEADESDKSFLWLYPTVEIITN 194
Query: 258 LDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D++H+ +++ + +K F FL + V G+ VIC D RS+L + +
Sbjct: 195 IDFDHMSAYQNNYEFLKKAFVEFLNHLPVYGYAVICIDDPAIRSVLSNVNR--------- 245
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
KIITYGFS D + + +L + + L +I L I
Sbjct: 246 ----------------KIITYGFSKDADLCILNYHQYREKSKFTVLIKNKKKL-EIILNI 288
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFD---------LIG 427
PG HNVLN+ A I + + + L+ L+ F G +RRF+ + G
Sbjct: 289 PGYHNVLNATASIGVSI------EEGIPDLVILRAMLN-FQGTNRRFENLGFYSLKQING 341
Query: 428 TIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ I DD+ HHPTE+ A + R +P+K LI VFQPH ++R L D F + LS
Sbjct: 342 RVGKVMIVDDYGHHPTELHATIATVRSGWPDKRLIMVFQPHRFTRTCELYDSFIHVLSTV 401
Query: 488 DQVVVSAV 495
D +++ V
Sbjct: 402 DVLLILNV 409
>gi|338975608|ref|ZP_08630959.1| UDP-N-acetylmuramate--alanine ligase [Bradyrhizobiaceae bacterium
SG-6C]
gi|338231352|gb|EGP06491.1| UDP-N-acetylmuramate--alanine ligase [Bradyrhizobiaceae bacterium
SG-6C]
Length = 501
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 152/429 (35%), Positives = 227/429 (52%), Gaps = 52/429 (12%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G+ V GSD ++ + L + G + IGH N+ G
Sbjct: 42 GPIHFVGIGGIGMSGIAEVLCNLGYTVQGSDASENANVTRLRDKGIKISIGHKAENVNGA 101
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D +V S+AI +DN E++ A+ + +P+ +R LA+L + IA++G+HGK+TT
Sbjct: 102 D------VMVVSTAIKRDNPELIAARGLRIPVVRRAEMLAELMRLKSCIAIAGTHGKTTT 155
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L A D T I G + + + G G+ V+EADE DG FL L VA+V
Sbjct: 156 TSMVATLLDAGALDPTVINGGIINAYGTNARL-GAGEWMVVEADESDGTFLKLPVDVAIV 214
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D F+ DAV+ F+ F++ + G V+C D ++L+ +I+
Sbjct: 215 TNVDPEHLDHFKTFDAVQEAFKDFVEGVPFYGFAVMCIDHPVVQTLVGKIE--------- 265
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER------GRPL 369
D +IITYG + D + P GGS + + R G +
Sbjct: 266 ---------------DRRIITYGENPQADARLVDLEP-FSGGSKFEVEFRHRKTQVGHRI 309
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHE---SIACLKLPLSKFMGVSRRFDLI 426
+ + L +PG HN LN+ A IA +HE S ++ L+ F GV RRF
Sbjct: 310 SDLVLPMPGRHNALNATAAIAV----------AHEIGISDDAIRKALADFGGVKRRFTRT 359
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G G I DD+ HHP E+ AVL+AAR K +IAV QPH Y+RL L ++F ++
Sbjct: 360 GEWNGVTIIDDYGHHPVEIAAVLRAARDSTKGK-VIAVVQPHRYTRLQSLFEEFCTCFND 418
Query: 487 ADQVVVSAV 495
AD V+V+ +
Sbjct: 419 ADTVIVADI 427
>gi|78187951|ref|YP_375994.1| UDP-N-acetylmuramate--L-alanine ligase [Chlorobium luteolum DSM
273]
gi|109892718|sp|Q3B130.1|MURC_PELLD RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|78167853|gb|ABB24951.1| UDP-N-acetylmuramate--L-alanine ligase [Chlorobium luteolum DSM
273]
Length = 473
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 146/421 (34%), Positives = 222/421 (52%), Gaps = 44/421 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H VGIGG+G+SA+A+L LK GF VSGSDL + L + GA ++ GH + D
Sbjct: 9 VHIVGIGGAGMSAIAELLLKSGFAVSGSDLSTGEVTDKLQQHGAVIYRGHEAGQVADCD- 67
Query: 138 SRFPNAVVASSAI-PQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
VV SSA+ P NVEI A G+P+ KRD L +L + I V+G+HGK+TT
Sbjct: 68 -----VVVYSSAVRPDANVEISEALKSGIPVVKRDEMLGELMRYKSGICVAGTHGKTTTT 122
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
+M+A +L G+ T ++G V + GS G G+ V+EADE+D FL L+P++AV+
Sbjct: 123 AMIATMLIESGESPTVMIGG-VSDYLKGSTVVGEGRYMVIEADEFDRAFLRLTPTIAVLN 181
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+L+ EH+D + D +K F F ++ G ++ D R ++ + +
Sbjct: 182 SLESEHMDTYGTLDELKRSFIEFANKVPFYGRVICSVDWPEIRRIIGSLNR--------- 232
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++ T G D A + + G + + + G + L +
Sbjct: 233 ----------------RLTTVGIEEPADVTAGDIVMD-HGRATFTITAFGTDYPGVCLNV 275
Query: 377 PGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDL-IGTIYGCHI 434
PG HN+LN+L+ AT L L I +R L L ++ G+ RRF + G +
Sbjct: 276 PGRHNILNALSAFATGLELGIEPER--------LIAGLGRYSGMRRRFQVKFRDSRGLMV 327
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSA 494
DD+AHHP+EV+A ++AAR +P+ +IAVFQPH +SR + D++ ALS AD V V+A
Sbjct: 328 IDDYAHHPSEVKATVKAARSGWPDARVIAVFQPHLFSRTLEFADEYGWALSRADGVYVAA 387
Query: 495 V 495
V
Sbjct: 388 V 388
>gi|291279000|ref|YP_003495835.1| UDP-N-acetylmuramate-alanine ligase [Deferribacter desulfuricans
SSM1]
gi|290753702|dbj|BAI80079.1| UDP-N-acetylmuramate-alanine ligase [Deferribacter desulfuricans
SSM1]
Length = 460
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/399 (32%), Positives = 207/399 (51%), Gaps = 44/399 (11%)
Query: 99 GFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEIL 158
GFE+SGSD+ + ++ L G + IGH+ N++ D VV SSAI +DN E++
Sbjct: 29 GFEISGSDISMNKNVKRLKNLGVKVFIGHNPENVKDVD------VVVYSSAIKEDNPELI 82
Query: 159 HAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHV 218
AK +P+ KR LA+LT I VSGSHGK+TT SM+A++ D T ++G +
Sbjct: 83 SAKDRHIPVIKRGEMLAELTRLKRSITVSGSHGKTTTTSMIAHIFIEAKLDPTIVIGGRL 142
Query: 219 PQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRR 278
++ G G F+ E+DE D FL L P++ VVTN+D EH+D+++D + +KS F
Sbjct: 143 NSSGQNAVL-GKGDYFICESDESDRSFLLLYPTINVVTNIDLEHLDVYQDLEDIKSAFIE 201
Query: 279 FLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYG 338
+ +I G ++C ++Q ++ I++ + TYG
Sbjct: 202 YCNKIPFYGLNLLCIENQNVTDIIPSIEK-------------------------RFQTYG 236
Query: 339 FSSFNDWYAESVCPNVQGG--SDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLI 396
F D A+++ +Q G S + + L +I L PG+HNVLNSL I +
Sbjct: 237 FKKSADIRADNI---IQDGYISTFDVYYFSEKLGRIHLNTPGIHNVLNSLGAIGVAI--- 290
Query: 397 GDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRF 456
+ + +K L F GV RR + + DD+ HHPTE++A LQ+ R +
Sbjct: 291 ----ECGITFDVIKEALKNFQGVERRLSIRYKDERRVVIDDYGHHPTEIKATLQSVRSLY 346
Query: 457 PNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
P+ ++ +FQPH Y+R L ++FA++ + D ++V+ +
Sbjct: 347 PDYKIVTIFQPHRYTRTKALLNEFASSFYDTDILIVTDI 385
>gi|381400614|ref|ZP_09925538.1| UDP-N-acetylmuramate--L-alanine ligase [Kingella kingae PYKK081]
gi|380834377|gb|EIC14221.1| UDP-N-acetylmuramate--L-alanine ligase [Kingella kingae PYKK081]
Length = 468
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 143/438 (32%), Positives = 221/438 (50%), Gaps = 56/438 (12%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
KNR IHFVGIGG+G+ +A++ GF VSGSD S+ L + G + GH+
Sbjct: 1 MKNRIKNIHFVGIGGAGMCGIAEVLHNLGFHVSGSDQSQSAVTRHLSQLGVRVFPGHTAE 60
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
+I G + VV S+AI +N E+ A + +P+ R LA+L + IA++G+H
Sbjct: 61 HIDGAE------VVVTSTAIAHENPEVQAALAQHIPVIPRAMMLAELMRLKDGIAIAGTH 114
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S+ A +L A G D T ++G + + G G+ V EADE D FL LSP
Sbjct: 115 GKTTTTSLTASILGAAGLDPTFVIGGKLTAAGTNAKL-GKGEYLVAEADESDASFLYLSP 173
Query: 251 SVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
+ V+TN+D +H+D + +D + + F F+ ++ G +C DS+ R++L +IK+
Sbjct: 174 VITVITNIDEDHMDTYGQDVNRLHQAFIDFVHRMPFYGKAFLCIDSEHVRTILSKIKK-- 231
Query: 310 GLKYSGGVVSNQSSDLWG---QGHDYKI-ITYGF---SSFNDWYAESVCPNVQGGSDYIL 362
++ + N +D++ Q +D ++ T F SS +
Sbjct: 232 --PFATYAIDNDQADIYATNVQTNDAQMQFTVNFRHESSLQSF----------------- 272
Query: 363 CERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRR 422
++L +PG HNVLN+LA I L + +A ++ L+ F GV RR
Sbjct: 273 --------DVTLNLPGRHNVLNALASIGVAL-------ECKAPVAAIQQGLANFAGVGRR 317
Query: 423 FDLIGTIY-----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLK 477
F G I + DD+ HHP E+ A + A R +PN L+ FQPH Y+R L
Sbjct: 318 FQSYGEIALPQGGKALVIDDYGHHPVEMAATIAATRGAYPNNRLVLAFQPHRYTRTKDLF 377
Query: 478 DDFANALSEADQVVVSAV 495
F + LS AD+VV++ V
Sbjct: 378 YQFVDVLSTADRVVLTEV 395
>gi|445062465|ref|ZP_21374851.1| UDP-N-acetylmuramate--L-alanine ligase [Brachyspira hampsonii
30599]
gi|444506155|gb|ELV06531.1| UDP-N-acetylmuramate--L-alanine ligase [Brachyspira hampsonii
30599]
Length = 462
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 145/429 (33%), Positives = 223/429 (51%), Gaps = 44/429 (10%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
F RK IHF+GIGG G+SA+A + GF ++GSDL ++ E L AG ++ GH
Sbjct: 2 FTKRKEKIHFIGIGGIGMSAIASVLNAIGFTITGSDLAKTAKTESLESAGIKVYYGHKAQ 61
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
NI+ + AVV SSAI N EI+ AK+ + + R LA+L IA+SGSH
Sbjct: 62 NIEDD-----VTAVVTSSAISPTNEEIIEAKAKKITVIPRGEMLAELMRLRYGIAISGSH 116
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGA-HVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLS 249
GK+TT S+++ ++ G + I+G H + + + V EADE DG FL LS
Sbjct: 117 GKTTTTSLISQIMMHAGLNPVCIIGGNHFNLKSNAACNDLSSEYMVCEADESDGSFLRLS 176
Query: 250 PSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
P + VVTN+D +H+D + + +A++ F F+ ++ G +C + + L
Sbjct: 177 PVINVVTNIDNDHLDYYGNVEALRVAFLEFINKVPFYGCSFLCFEDNVVKDL-------- 228
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILC-ERGRP 368
+ + K +YGFS D+Y + V+ + Y +
Sbjct: 229 -----------------SKSANKKYYSYGFSKDYDFYVDKDSIRVEAPTTYFTAYHNDKC 271
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
L + S+ + G+HNVLNSLA I + L I +K L F GV RR +
Sbjct: 272 LGEFSVPLIGIHNVLNSLASIGVGVHL-------GIEIDDIKEGLKTFEGVGRRLN---K 321
Query: 429 IYGCHI--YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
+Y I +DD+AHHPTE++A L + + + N+ +IAVFQPH YSR +L +DF +A ++
Sbjct: 322 LYDKEITLFDDYAHHPTEIKATLSSVKNAYKNRRIIAVFQPHRYSRTELLLNDFESAFND 381
Query: 487 ADQVVVSAV 495
AD+V++S +
Sbjct: 382 ADEVIISDI 390
>gi|365880843|ref|ZP_09420187.1| UDP-N-acetyl-muramate:alanine ligase, L-alanine adding enzyme
[Bradyrhizobium sp. ORS 375]
gi|365291033|emb|CCD92718.1| UDP-N-acetyl-muramate:alanine ligase, L-alanine adding enzyme
[Bradyrhizobium sp. ORS 375]
Length = 467
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 147/411 (35%), Positives = 220/411 (53%), Gaps = 46/411 (11%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G+ V GSD ++ + L E G + +GH N+ G
Sbjct: 8 GPIHFVGIGGIGMSGIAEVLCNLGYTVQGSDASDNANVARLREKGITVSVGHKAENVAGA 67
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D VV S+AI +DN E++ A++ +P+ +R LA+L + +A++G+HGK+TT
Sbjct: 68 D------VVVVSTAIKRDNPELMAARAQRIPVVRRAEMLAELMRLKSCVAIAGTHGKTTT 121
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L A G D T I G + + + GGG+ V+EADE DG FL L VA+V
Sbjct: 122 TSMVAALLDAGGLDPTVINGGIINAYGTNARL-GGGEWMVVEADESDGTFLKLPADVAIV 180
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D F+ DAV+ FR F++ + G V+C D ++L+ +I+
Sbjct: 181 TNVDPEHLDHFKTFDAVQDAFRAFVENVPFYGFAVMCIDHPVVQALVGKIE--------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR------PL 369
D +IITYG + D + P + GGS + + R R +
Sbjct: 232 ---------------DRRIITYGVNPQADVRLVDLAP-MGGGSSFKVVFRDRKSGATHEI 275
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
+ I L +PG HN N+ A IA R+ S ++ ++ F GV RRF G
Sbjct: 276 SDIVLPMPGRHNASNATAAIAVA-------RELGLSDEAIRKAIAGFGGVKRRFTRTGEW 328
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
G + DD+ HHP E+ AVL+AAR+ N ++AV QPH Y+RL L ++F
Sbjct: 329 NGVTVIDDYGHHPVEIAAVLKAAREST-NGKVVAVVQPHRYTRLQSLFEEF 378
>gi|118469061|ref|YP_888503.1| UDP-N-acetylmuramate--L-alanine ligase [Mycobacterium smegmatis
str. MC2 155]
gi|399988528|ref|YP_006568878.1| UDP-N-acetylmuramate--L-alanine ligase [Mycobacterium smegmatis
str. MC2 155]
gi|166224705|sp|A0R015.1|MURC_MYCS2 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|118170348|gb|ABK71244.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium smegmatis str.
MC2 155]
gi|399233090|gb|AFP40583.1| UDP-N-acetylmuramate--L-alanine ligase [Mycobacterium smegmatis
str. MC2 155]
Length = 482
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 154/422 (36%), Positives = 221/422 (52%), Gaps = 42/422 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H VGIGG+G+S +A++ L +G VSGSD S + L GA + IGH S++ G
Sbjct: 13 VHMVGIGGAGMSGVARILLDRGGLVSGSDAKESRGVVALRARGAEIRIGHDASSLDLLPG 72
Query: 138 SRFPNAVVAS-SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
P AVV + +AIP+ N E++ A+ G+P+ R LAKL Y + V+G+HGK+TT
Sbjct: 73 G--PTAVVTTHAAIPKTNPELVEARKRGIPVILRPVVLAKLMTGYTTLMVTGTHGKTTTT 130
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SML L+ G D + VG + + + +G G FV EADE DG L +P+VAVVT
Sbjct: 131 SMLIVALQHSGFDPSFAVGGELGEAGTNA-HHGSGTTFVAEADESDGSLLEYTPNVAVVT 189
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F E A ++F F+++I GG LV+C D A +L D+
Sbjct: 190 NIEADHLDFFGSEQAYTAVFDSFVERIAPGGALVVCTDDPGAAALADR------------ 237
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYI----LCERGRPLAQI 372
+D G +++ YG S D A ++ Q G+ + L P A +
Sbjct: 238 ------TDALG----IRVLRYG--STGDNLAGTLLSWEQQGTGAVAHIRLAGEHNPRA-V 284
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC 432
L +PG H + L + R+ + L+ F GV RRF+L+GT G
Sbjct: 285 RLSVPGRH-------MALNALAALLAAREIGAPTDSVLDGLAGFEGVRRRFELVGTAAGA 337
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKA--LIAVFQPHTYSRLVVLKDDFANALSEADQV 490
++DD+AHHPTEVRA L+AAR ++ FQPH YSR +F ALS ADQV
Sbjct: 338 RVFDDYAHHPTEVRATLEAARTVVDQNGGRVVVAFQPHLYSRTATFAHEFGAALSVADQV 397
Query: 491 VV 492
VV
Sbjct: 398 VV 399
>gi|254469048|ref|ZP_05082454.1| UDP-N-acetylmuramate--alanine ligase [beta proteobacterium KB13]
gi|207087858|gb|EDZ65141.1| UDP-N-acetylmuramate--alanine ligase [beta proteobacterium KB13]
Length = 461
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 149/427 (34%), Positives = 225/427 (52%), Gaps = 47/427 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
+N+ +IHF+GIGGSG+S +A++ F VSGSD SS ++ L + G + H
Sbjct: 1 MENKIKYIHFIGIGGSGMSGIAEIMHNMNFVVSGSDPNQSSVIDHLRKRGIPIFSKHEEK 60
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
NIQ D VV S+AIP++N EI+ AK+ +PI R L++L IA++G+H
Sbjct: 61 NIQKAD------VVVTSTAIPKNNPEIVAAKNQNIPIIPRAEMLSELMRFKEGIAIAGTH 114
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK++T S+LA ++ G D T ++G + S G K+ ++EADE D FL L+P
Sbjct: 115 GKTSTTSILATIMNDAGLDPTYVIGGRINSLRQ-SARLGKSKHMIVEADESDASFLHLNP 173
Query: 251 SVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
S +VTN+D++H++ + DE+ +K F F+ QI + +C D + +S+ I +
Sbjct: 174 SNVLVTNIDYDHMETYGHDEERLKQTFVDFIHQIPFYNEVFLCIDDKNIKSIQKLIAR-- 231
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPL 369
IITYGFS D+Y + V + S + + + +
Sbjct: 232 -----------------------PIITYGFSKKADYYPDRVVIK-KNKSSFRVNSISKKI 267
Query: 370 AQISLQI--PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
S++I PG H +LN+L IA L+L K Q + L KF GVSRRFDL
Sbjct: 268 RSFSVEIDMPGRHYILNTLGAIAIALSL-NIKPQ------IISKALKKFKGVSRRFDLYE 320
Query: 428 TIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANA 483
H+ DD+ HHPTE++AVL + ++ FP K + VFQPH YSR L + F
Sbjct: 321 EFKLGEKNIHLIDDYGHHPTEIKAVLDSIKKGFPGKKINLVFQPHRYSRTKDLFEQFVQI 380
Query: 484 LSEADQV 490
L+ AD++
Sbjct: 381 LAMADRL 387
>gi|116750889|ref|YP_847576.1| UDP-N-acetylmuramate--L-alanine ligase [Syntrophobacter
fumaroxidans MPOB]
gi|166224744|sp|A0LNY9.1|MURC_SYNFM RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|116699953|gb|ABK19141.1| UDP-N-acetylmuramate--L-alanine ligase [Syntrophobacter
fumaroxidans MPOB]
Length = 469
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 154/425 (36%), Positives = 222/425 (52%), Gaps = 43/425 (10%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
R IHFVGIGG G+S +A+L L G+ VSGSDL + L GA +H+GH ++
Sbjct: 3 KRYQHIHFVGIGGIGMSGIAELLLNLGYRVSGSDLKETEITRRLSAMGAAVHLGHRAEHV 62
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVG-VPIYKRDYWLAKLTEKYNLIAVSGSHG 191
G D VV SSAI DN E A+ +G VP+ +R LA+L + V+G+HG
Sbjct: 63 LGAD------VVVLSSAISDDNPENRAAREMGKVPVIRRAEMLAELMRLKYSVLVAGAHG 116
Query: 192 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPS 251
K+TT SM++ VL G D T ++G + + + G G V EADE DG FL L P+
Sbjct: 117 KTTTTSMVSTVLARGGLDPTVVIGGKLNAWGTNAKL-GNGDFMVAEADESDGTFLLLPPT 175
Query: 252 VAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
+AVVTN+D EH+D + D ++ F +F+ +I G V+C + + +S+L ++++
Sbjct: 176 IAVVTNIDLEHLDFYRDLAHIQETFLQFINKIPFYGQAVLCLEDENIQSILPRVEK---- 231
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPLA 370
+ TYGFSS D+ A V G S Y + G L
Sbjct: 232 ---------------------RFTTYGFSSQADFQARDV--RTSGLFSSYRVHSHGDELG 268
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+I ++IPG HNVLNSLA +A L D A ++ L GV RRF + G
Sbjct: 269 EIEIRIPGRHNVLNSLAAVAVARELDLD-------WANIQDGLRDMTGVQRRFQIKGEAA 321
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP+E+RAVLQ +P++ I VFQPH Y+R L + FA +D +
Sbjct: 322 NVLVIDDYGHHPSEIRAVLQTLADCYPDRRRIVVFQPHRYTRTRALMEQFARCFYHSDVL 381
Query: 491 VVSAV 495
+V+ +
Sbjct: 382 LVTEI 386
>gi|182677686|ref|YP_001831832.1| UDP-N-acetylmuramate--L-alanine ligase [Beijerinckia indica subsp.
indica ATCC 9039]
gi|229486470|sp|B2IGG1.1|MURC_BEII9 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|182633569|gb|ACB94343.1| UDP-N-acetylmuramate--alanine ligase [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 476
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 155/432 (35%), Positives = 227/432 (52%), Gaps = 53/432 (12%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ L G+ V GSD ++ + L GA + IGH N+
Sbjct: 8 GPIHFVGIGGIGMSGIAEVLLNLGYHVQGSDAAENANVLRLRTKGATIAIGHKPENL--G 65
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D + VV S+AI +DN E++HA+ + +P+ +R LA+L +AV+G+HGK+TT
Sbjct: 66 DAA----VVVVSTAIKRDNPELVHARELRLPVVRRAEMLAELMRLKQCVAVAGTHGKTTT 121
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
S++A +L A D T I G + + + G G V+EADE DG FL L +A+V
Sbjct: 122 TSLVATLLDAGKFDPTVINGGIINAYGTNARL-GAGDWMVVEADESDGTFLKLPADIAIV 180
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D F+ DA+K FR F++ I G V+C D + L+ I+
Sbjct: 181 TNIDPEHLDHFKTFDAIKQAFRAFIENIPFYGFAVMCLDHPVVQELVGTIE--------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG-SDYILCERGRPLAQ--- 371
D +IITYG + D V N+ GG S + + R R Q
Sbjct: 232 ---------------DRRIITYGENPQADMRLVDV--NLDGGMSRFNVVVRDRKAGQGKR 274
Query: 372 --------ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRF 423
+ + +PG+HN LN+ A ++ L L S ++ L F GV RRF
Sbjct: 275 FEERRVEDLLMPMPGLHNALNATAALSVALQL-------GMSDDAIRSALRGFGGVKRRF 327
Query: 424 DLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANA 483
G G I+DD+ HHP E+ AVL+AAR + +IAV QPH Y+RL L ++FA+
Sbjct: 328 TRTGEWNGAQIFDDYGHHPVEIAAVLRAARASTKGQ-VIAVVQPHRYTRLHSLFNEFASC 386
Query: 484 LSEADQVVVSAV 495
++AD V+V+ V
Sbjct: 387 FNDADVVIVADV 398
>gi|326795769|ref|YP_004313589.1| UDP-N-acetylmuramate--L-alanine ligase [Marinomonas mediterranea
MMB-1]
gi|326546533|gb|ADZ91753.1| UDP-N-acetylmuramate--L-alanine ligase [Marinomonas mediterranea
MMB-1]
Length = 476
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 144/427 (33%), Positives = 222/427 (51%), Gaps = 58/427 (13%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG G+ +A++ QG+ V+GSD+ SS + L + G ++IGH N+
Sbjct: 20 VHFIGIGGVGMCGIAEVLHNQGYRVTGSDIKTSSTTQRLEDMGICVYIGHKEENVFD--- 76
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ +V S+AI ++N EI AK +PI +R LA+L + IAV+G+HGK+TT S
Sbjct: 77 ---AHVIVVSTAINEENPEIKWAKEHRIPIVRRAEMLAELMRYRHGIAVAGTHGKTTTTS 133
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+++ +L A GD T ++G + + G K V EADE D FL L P +VTN
Sbjct: 134 LMSSILTATGDAPTFVIGGKLTSAGTNAQL-GSSKYLVAEADESDASFLHLQPQTVIVTN 192
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D ++ D + VK F F+ + G V+C D + RS++ ++ +
Sbjct: 193 IDEDHMDTYQGDFEQVKRTFIEFIHNLPFYGLAVLCIDDENVRSIMPELSR--------- 243
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE------RGRPLA 370
++TYG D+YA + Q G CE G P+
Sbjct: 244 ----------------PVLTYGIEEQADFYATDIK---QSGR---YCEFMAHLPEGEPI- 280
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFD----LI 426
+I L +PG HNVLN+LA IA V T +G + ++ L F GV RRF L+
Sbjct: 281 RIRLPMPGKHNVLNALATIA-VATDLG------VAPNVIQAGLMGFEGVGRRFQELEPLV 333
Query: 427 GTIYGCHIY-DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
+ G ++ DD+ HHP+EV A + A R +P K L+ V+QPH Y+R L +DF LS
Sbjct: 334 LSDGGKAMFVDDYGHHPSEVLATINAIRDGWPEKRLVMVYQPHRYTRTRDLYEDFVRVLS 393
Query: 486 EADQVVV 492
+ D +++
Sbjct: 394 KVDVLIL 400
>gi|260655412|ref|ZP_05860900.1| UDP-N-acetylmuramate--alanine ligase [Jonquetella anthropi E3_33
E1]
gi|260629860|gb|EEX48054.1| UDP-N-acetylmuramate--alanine ligase [Jonquetella anthropi E3_33
E1]
Length = 461
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 142/413 (34%), Positives = 213/413 (51%), Gaps = 34/413 (8%)
Query: 81 VGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRF 140
+G+GG+G+S LA L GF+V+G D+ S Y + EAG +++GH ++ +
Sbjct: 1 MGVGGAGMSGLALLYKALGFQVTGCDMGNSCYTTKVREAGVPVYLGHDPHHLDDHKA--- 57
Query: 141 PNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLA 200
+ + SSAIP DN E++ A+ G+P+ +R L+ L + V+G+HGK+TT SM++
Sbjct: 58 -DILAYSSAIPSDNPELVTARERGIPVVQRAELLSLLFNSRCGVGVAGTHGKTTTTSMIS 116
Query: 201 YVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDW 260
+ + G + T +G + + G G V E DE DG F PSVAVVTN+DW
Sbjct: 117 LIAERAGLEPTVAIGGELCDIGCNAKL-GNGNVMVAELDESDGSFQFFQPSVAVVTNVDW 175
Query: 261 EHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSN 320
+HV+ + +V F FL + G V+CGD R+LL +++
Sbjct: 176 DHVNYYPSRQSVVDAFVSFLANVPSDGFEVLCGDDPGVRALLGRLE-------------- 221
Query: 321 QSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVH 380
GQ ++ TYG ND+Y ++ GG Y L GR + ++ L + G H
Sbjct: 222 ------GQNCQNRV-TYGLEKGNDFYPTNLEQYPGGGMSYTLNRFGRQVGRVRLTVSGTH 274
Query: 381 NVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI-YGCHIYDDFA 439
N+LNSLA +A L S + L++F GV RR G +YDD+
Sbjct: 275 NLLNSLAALAAGSRL-------GISFDLMVSALNEFHGVKRRLQQKGNAGDDILVYDDYG 327
Query: 440 HHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
HHP E++A L A Q FP + L+ VFQPH Y+R L + FA LS+ADQV++
Sbjct: 328 HHPNELKATLTALGQMFPKRRLVVVFQPHRYTRTAALYEQFAQVLSQADQVIL 380
>gi|269215876|ref|ZP_06159730.1| UDP-N-acetylmuramate--alanine ligase [Slackia exigua ATCC 700122]
gi|269130826|gb|EEZ61902.1| UDP-N-acetylmuramate--alanine ligase [Slackia exigua ATCC 700122]
Length = 463
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 223/421 (52%), Gaps = 44/421 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HFVG+GG G+S +A++A G VSGSD+ S+Y + L+ AG + +GH +N+
Sbjct: 10 VHFVGVGGVGMSGIARVAADFGMAVSGSDMATSAYTDQLVAAGIRVFVGHDAANVD---- 65
Query: 138 SRFP--NAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
P + VVAS+A+P N E++ A+ +G+P+++R + LA+L +A +G+HGK+TT
Sbjct: 66 ---PACDVVVASTAVPDTNPEVMRARELGIPVWQRAHMLAELGRGKKTLAAAGTHGKTTT 122
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
+SMLA + A+G D T IVG V + + G G +V+EADE DG FL LSP VA+V
Sbjct: 123 SSMLAGAVDALGLDPTFIVGGMVDAYRTNAK-SGTGDYYVVEADESDGSFLNLSPYVALV 181
Query: 256 TNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYS 314
TN++ +H+D + D +++ F+ F+ + G LV+CG+ L ++ + TG
Sbjct: 182 TNVEADHLDHYVGGIDEIRATFKTFMASVPADGALVVCGEDPS----LAELAESTG---- 233
Query: 315 GGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISL 374
++++YGFS D + + + G +
Sbjct: 234 -----------------RRVVSYGFSPACDVRVSDYATHGVSSTFTLSFPDGTVVESGLA 276
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHI 434
+ PG HN LN+ V+ + L D +A ++ + GV RRFDL G G +
Sbjct: 277 KNPGRHNALNAAGVLGVIWALGLD-------VASASAGIASYSGVRRRFDLKGEAAGVAV 329
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSA 494
DD+AHHPTE+ A L AA N+ + +FQPH YSR L D+F A + D + V
Sbjct: 330 VDDYAHHPTEIAATLAAATSLDFNRVHV-IFQPHRYSRTASLADEFGPAFAGVDSLTVLG 388
Query: 495 V 495
V
Sbjct: 389 V 389
>gi|417846362|ref|ZP_12492369.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus haemolyticus
M21639]
gi|341952500|gb|EGT79025.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus haemolyticus
M21639]
Length = 475
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 145/465 (31%), Positives = 235/465 (50%), Gaps = 68/465 (14%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+ R IHF+GIGG+G+S +A++ L +G+++SGSD+ + L +AGA ++IGH
Sbjct: 11 IIPEMRRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGLVTQRLTQAGAKIYIGH 70
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
+ +I+G + VV SSAI DN E++ AK +P+ +R LA++ + IAV+
Sbjct: 71 AEEHIEG------ASVVVVSSAIKDDNPELVAAKQKRIPVIQRAQMLAEIMRFRHGIAVA 124
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEAD 239
G+HGK+TT +M++ + D P F +G + GKN + EAD
Sbjct: 125 GTHGKTTTTAMISMIYTQAKLD---------PTFVNGGLVKSAGKNAHLGASRYLIAEAD 175
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCA 298
E D FL L P V+VVTN++ +H+D +E D + +K+ + +FL + G V+C D
Sbjct: 176 ESDASFLHLQPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLPFYGLAVMCADDPVL 235
Query: 299 RSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS 358
L+ ++ + ++ITYGFS D+ E G
Sbjct: 236 MELVPKVGR-------------------------QVITYGFSEHADYRIEDYEQTGFQGH 270
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
++C + + L +PG HN LN+ A +A K + + A L+ L+ F G
Sbjct: 271 YTVICPDNERI-NVLLNVPGKHNALNATAALAVA------KEEGISNEAILE-ALADFQG 322
Query: 419 VSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
RRFD +G + DD+ HHPTEV ++AAR+ + +K ++ +FQPH YSR
Sbjct: 323 AGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVGVTIKAAREGWGDKRIVMIFQPHRYSRTR 382
Query: 475 VLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
L DDF LS+ D +++ L ++A ++ A + +C
Sbjct: 383 DLFDDFVQVLSQVDALIM-------LDVYAAGEAPIVGADSKSLC 420
>gi|419839845|ref|ZP_14363246.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus haemolyticus
HK386]
gi|386908947|gb|EIJ73631.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus haemolyticus
HK386]
Length = 475
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 146/465 (31%), Positives = 235/465 (50%), Gaps = 68/465 (14%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+ R IHF+GIGG+G+S +A++ L +G+++SGSD+ + L +AGA ++IGH
Sbjct: 11 IIPEMRRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIANGLVTQRLAQAGAKIYIGH 70
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
+ +I+G + VV SSAI DN E++ AK +P+ +R LA++ + IAV+
Sbjct: 71 AEEHIEG------ASVVVVSSAIKDDNPELVAAKQKRIPVIQRAQMLAEIMRFRHGIAVA 124
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEAD 239
G+HGK+TT +M++ + D P F +G + GKN + EAD
Sbjct: 125 GTHGKTTTTAMISMIYTQAKLD---------PTFVNGGLVKSAGKNAHLGASRYLIAEAD 175
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCA 298
E D FL L P V+VVTN++ +H+D +E D + +K+ + +FL + G V+C D
Sbjct: 176 ESDASFLHLQPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLPFYGLAVMCADDPVL 235
Query: 299 RSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS 358
L+ ++ + ++ITYGFS D+ E G
Sbjct: 236 MELVPKVGR-------------------------QVITYGFSEHADYRIEDYEQTGFQGH 270
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
++C + + L +PG HN LN+ A +A K + + A L+ L+ F G
Sbjct: 271 YTVICPDNERI-NVLLNVPGKHNALNATAALAVA------KEEGIGNEAILE-ALADFQG 322
Query: 419 VSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
RRFD +G + DD+ HHPTEV ++AAR+ + +K ++ VFQPH YSR
Sbjct: 323 AGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVDVTIKAAREGWGDKRIVMVFQPHRYSRTR 382
Query: 475 VLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
L DDF LS+ D +++ L ++A ++ A + +C
Sbjct: 383 DLFDDFVQVLSQVDALIM-------LDVYAAGEAPIVGADSKSLC 420
>gi|167614206|gb|ABZ89709.1| UDP-N-acetylmuramate--L-alanine ligase [Buchnera aphidicola]
Length = 476
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 147/438 (33%), Positives = 224/438 (51%), Gaps = 52/438 (11%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I D KN+ IH +GIGG+G+S +A + L+ G+++SGSDL+ ++ + L+ GA ++ H
Sbjct: 13 IADKKNKN--IHLIGIGGAGMSGIALILLQLGYKISGSDLLQNNMTKQLIHLGAKIYFKH 70
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
S NIQ D ++ SSAI N EI++AK +PI R L L + IA+S
Sbjct: 71 SKKNIQNID------FIIKSSAILSTNPEIIYAKKNNIPILLRAEMLEILMQFKYGIAIS 124
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT S++A + G D T I G + + G + F++EADE D FL
Sbjct: 125 GTHGKTTTTSIIADIFIESGLDPTIINGGIIKSINSHAKL-GYSRYFIVEADESDASFLY 183
Query: 248 LSPSVAVVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 306
L+P + ++TN++ +H+D +++ +K F FLK+I + G ++C D+ +L IK
Sbjct: 184 LNPKIGIITNIEDDHMDHYDNNFIKLKQAFLTFLKKIPLNGTAIVCIDNDAICDILPYIK 243
Query: 307 QDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERG 366
KI+TYGF+ D++ S + G I+ +
Sbjct: 244 C-------------------------KILTYGFNKNADFHIYSYKQDGFIGYLQIIIKHQ 278
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
L I+L IPG HN LN+ A A VL I +K + + IA LK F G RRF+ +
Sbjct: 279 IKL-NITLNIPGKHNALNATA--AVVLA-IHEKIKHYNIIASLK----NFQGTCRRFEFL 330
Query: 427 GTI---------YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLK 477
G + DD+ HHPTE+ + R +PN LI +FQPH Y+R L
Sbjct: 331 GKYSIKKNIIKRQPTMLIDDYGHHPTELSETINTIRTGWPNNNLIMIFQPHRYTRTHNLY 390
Query: 478 DDFANALSEADQVVVSAV 495
DF LS+ D +++ V
Sbjct: 391 HDFVKILSKVDVLLILNV 408
>gi|393763164|ref|ZP_10351787.1| UDP-N-acetylmuramate--L-alanine ligase [Alishewanella agri BL06]
gi|392606081|gb|EIW88969.1| UDP-N-acetylmuramate--L-alanine ligase [Alishewanella agri BL06]
Length = 484
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 146/427 (34%), Positives = 221/427 (51%), Gaps = 49/427 (11%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
R IHFVGIGG+G+ +A++ L +G++VSGSD+ + E L GA + IGHS +NI
Sbjct: 13 RRVERIHFVGIGGAGMGGIAEVLLNEGYKVSGSDIASGAVTERLAGLGAEIFIGHSAANI 72
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
QG + VV SSAI DN E+ A+ + +P+ +R L +L + IA++G+HGK
Sbjct: 73 QG------ASVVVVSSAIKADNPEVSSARELRIPVVRRAEMLGELMRFRHGIAIAGTHGK 126
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+TT S++A V G D T ++G + + G G+ + EADE D FL L P
Sbjct: 127 TTTTSLMASVFAEAGADPTFVIGGLLNSAGSNARL-GAGRYLIAEADESDASFLHLQPMA 185
Query: 253 AVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
V+TN++ +H+D ++ D + +K+ + FL + G V+C D R L+ I +
Sbjct: 186 TVITNIEADHMDTYQGDFEKLKATYLEFLHNLPFYGLAVVCLDDPVLRQLIPCIGR---- 241
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPL 369
++TYGFS D+ + Q G S +++ +
Sbjct: 242 ---------------------TVLTYGFSEDADY---QISDFSQSGTVSQFVITDPAGNQ 277
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
+ISL +PG HN LN+ AV A L D+ + ++I LSKF G+ RRF G
Sbjct: 278 REISLNLPGRHNALNATAVFA----LAQDEGIAEQAILA---ALSKFEGIGRRFQQYGEF 330
Query: 430 YGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
+ DD+ HHPTEV A + A R +P + L+ +QPH Y+R L DDFA LS
Sbjct: 331 DTGRGKVLLLDDYGHHPTEVAATVAAVRSAWPERRLVMCYQPHRYTRTRDLYDDFARVLS 390
Query: 486 EADQVVV 492
E D +++
Sbjct: 391 EVDTLLL 397
>gi|15604117|ref|NP_220632.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia prowazekii str.
Madrid E]
gi|383487089|ref|YP_005404769.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia prowazekii str.
GvV257]
gi|383487665|ref|YP_005405344.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia prowazekii str.
Chernikova]
gi|383488512|ref|YP_005406190.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia prowazekii str.
Katsinyian]
gi|383489354|ref|YP_005407031.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia prowazekii str.
Dachau]
gi|383499490|ref|YP_005412851.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia prowazekii str.
BuV67-CWPP]
gi|383500329|ref|YP_005413689.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia prowazekii str.
RpGvF24]
gi|386082079|ref|YP_005998656.1| UDP-N-acetylmuramate--alanineligase [Rickettsia prowazekii str.
Rp22]
gi|6225734|sp|Q9ZDS8.1|MURC_RICPR RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|3860809|emb|CAA14709.1| UDP-N-ACETYLMURAMATE--ALANINE LIGASE (murC) [Rickettsia prowazekii
str. Madrid E]
gi|292571843|gb|ADE29758.1| UDP-N-acetylmuramate--alanineligase [Rickettsia prowazekii str.
Rp22]
gi|380757454|gb|AFE52691.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia prowazekii str.
GvV257]
gi|380758026|gb|AFE53262.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia prowazekii str.
RpGvF24]
gi|380760544|gb|AFE49066.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia prowazekii str.
Chernikova]
gi|380761391|gb|AFE49912.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia prowazekii str.
Katsinyian]
gi|380762236|gb|AFE50756.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia prowazekii str.
BuV67-CWPP]
gi|380763077|gb|AFE51596.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia prowazekii str.
Dachau]
Length = 495
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 143/429 (33%), Positives = 218/429 (50%), Gaps = 48/429 (11%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHF+GIGG G+S +A++ G++V GSDLV + + L G + +G + NI+
Sbjct: 14 GTIHFIGIGGVGMSGIAEILHNLGYKVQGSDLVENYNTKRLESYGIKIFLGQAKQNIKN- 72
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
+ VV SSAI Q+N EI A +PI +R LA+L +AVSGSHGK+TT
Sbjct: 73 -----VSYVVISSAINQNNPEIKEALERKIPIIRRAEMLAELMRLKCSVAVSGSHGKTTT 127
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAV 254
S++A + +A G T I G + + Y G N+++ EADE D F+ + ++A+
Sbjct: 128 TSLIACLFEAAGLCPTVINGGIINNKSTNA--YLGSSNYLIAEADESDATFIHIPSTIAI 185
Query: 255 VTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY- 313
+TN+D EH+D ++D + + FR F+ + G V C D + R L+D I + + Y
Sbjct: 186 ITNIDPEHLDYYQDFEILIGAFRSFITNLPFYGFAVCCIDHKIVRKLVDDITERKIITYG 245
Query: 314 -----SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP 368
+ + N ++D+ D KI PNV G +
Sbjct: 246 IDSEDAHIIAFNINTDIASSTFDVKI---------------SLPNVLGTT---------I 281
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
+ +I++ PG HN+LNSLA IA + L I +K + F GV RRF +
Sbjct: 282 IEKITIPTPGRHNILNSLAAIAVGIEL-------DFGIKAIKNGFNNFKGVKRRFTKVAE 334
Query: 429 IYGCHIYDDFAHHPTEVRAVLQAARQ--RFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
I DD+AHHP E++A L A+ N +IA+FQPH YSR+ L DDF ++
Sbjct: 335 YNKAVIIDDYAHHPEEIKATLATAKNIANQQNGKVIAIFQPHRYSRIKYLFDDFMLCFAD 394
Query: 487 ADQVVVSAV 495
AD + ++ +
Sbjct: 395 ADILYITNI 403
>gi|365890818|ref|ZP_09429306.1| UDP-N-acetyl-muramate:alanine ligase, L-alanine adding enzyme
[Bradyrhizobium sp. STM 3809]
gi|365333279|emb|CCE01837.1| UDP-N-acetyl-muramate:alanine ligase, L-alanine adding enzyme
[Bradyrhizobium sp. STM 3809]
Length = 467
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 147/411 (35%), Positives = 219/411 (53%), Gaps = 46/411 (11%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G+ V GSD ++ + L E G + +GH N+ G
Sbjct: 8 GPIHFVGIGGIGMSGIAEVLCNLGYTVQGSDASDNANVARLREKGITVSVGHKAENVAGA 67
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D VV S+AI +DN E++ A++ +P+ +R LA+L + +A++G+HGK+TT
Sbjct: 68 D------VVVVSTAIKRDNPELMAARAQRIPVVRRAEMLAELMRLKSCVAIAGTHGKTTT 121
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L A G D T I G + + + GGG+ V+EADE DG FL L VA+V
Sbjct: 122 TSMVAALLDAGGLDPTVINGGIINAYGTNARL-GGGEWMVVEADESDGTFLKLPADVAIV 180
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D F+ DAV+ FR F++ + G V+C D ++L+ +I+
Sbjct: 181 TNVDPEHLDHFKTFDAVQDAFRAFVENVPFYGFAVMCIDHPVVQALVGKIE--------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR------PL 369
D +IITYG + D + P + GGS + + R R +
Sbjct: 232 ---------------DRRIITYGVNPQADVRLVDLTP-MGGGSSFKVVFRDRKSGATHEI 275
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
+ I L +PG HN N+ A IA R+ S ++ + F GV RRF G
Sbjct: 276 SDIVLPMPGRHNASNATAAIAVA-------RELGLSDEAIRKAIGGFGGVKRRFTRTGEW 328
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
G + DD+ HHP E+ AVL+AAR+ N ++AV QPH Y+RL L ++F
Sbjct: 329 NGVTVIDDYGHHPVEIAAVLKAAREST-NGKVVAVVQPHRYTRLQSLFEEF 378
>gi|381158441|ref|ZP_09867674.1| UDP-N-acetylmuramate--alanine ligase [Thiorhodovibrio sp. 970]
gi|380879799|gb|EIC21890.1| UDP-N-acetylmuramate--alanine ligase [Thiorhodovibrio sp. 970]
Length = 497
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 151/429 (35%), Positives = 217/429 (50%), Gaps = 46/429 (10%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
R +HFVGIGG+G+S +A+L L G++V GSD + E L GA + IGH +
Sbjct: 29 GRIRRLHFVGIGGAGMSGIAELLLTLGYQVQGSDRRRGAVTERLERLGAAVFIGHRADQV 88
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
+G D AVV SSAI DN EI A++ +PI +R LA+L Y +AV+G+HGK
Sbjct: 89 RGVD------AVVVSSAIDVDNPEIEAARAARLPIVRRAEMLAELMRFYYGVAVAGTHGK 142
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+TT S++A +L G D T ++G + G K + EADE D FL L P +
Sbjct: 143 TTTTSLIASILGEAGLDPTFVIGGLL-NSAGSHARLGSSKFLIAEADESDASFLLLQPMM 201
Query: 253 AVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
AVVTN+D +H+ + D +++ F FL + G V+C D ++ ++ +
Sbjct: 202 AVVTNIDADHMITYGNDFSRLRATFVEFLHHLPFYGLAVLCADDPEVAAVQSEVAR---- 257
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPN-VQGGSDYILCERGRPLA 370
+ TYG + D A +CP + G E G L
Sbjct: 258 ---------------------PVRTYGTGAGADLRALDICPQGARMGFRVQDRESGLDLP 296
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL--IGT 428
I L +PG HNVLN+LA IA L + + E+I + L++F G+ RRF + I
Sbjct: 297 -IELNLPGQHNVLNALAAIAVAL----EHQVPPEAI---QTALAQFQGIGRRFVVSEITR 348
Query: 429 IYGCHI--YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G + DD+ HHP E+ A L A RQ +P + L+ VFQPH YSR + +DFA LS
Sbjct: 349 PAGDQVTLVDDYGHHPRELAATLTAIRQGWPGRRLLLVFQPHRYSRTLEQFEDFAQVLSS 408
Query: 487 ADQVVVSAV 495
D +V+ V
Sbjct: 409 VDVLVLCEV 417
>gi|90413041|ref|ZP_01221039.1| UDP-N-acetylmuramate--L-alanine ligase [Photobacterium profundum
3TCK]
gi|90326056|gb|EAS42495.1| UDP-N-acetylmuramate--L-alanine ligase [Photobacterium profundum
3TCK]
Length = 486
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 143/449 (31%), Positives = 217/449 (48%), Gaps = 62/449 (13%)
Query: 53 VSVLTNCTFKRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSY 112
+S L N + + + + R IHFVGIGG+G+S +A++ + +G+ +SGSDL ++
Sbjct: 1 MSKLDNQQLAKIRTMVPEMR-RVERIHFVGIGGAGMSGIAEVLVNEGYRISGSDLAPNAV 59
Query: 113 MEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDY 172
+ L GA + GH+ N+ G + VV S+AI QDN E++ A+ + +P+ +R
Sbjct: 60 TDSLTRKGAEIFFGHAAENVNG------ASVVVVSTAIAQDNPELVAARELRIPVVRRAE 113
Query: 173 WLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGK 232
LA+L + IA++G+HGK+TT +++ + G D P F +G + G
Sbjct: 114 MLAELMRYRHGIAIAGTHGKTTTTALMTQIYFEAGLD---------PTFVNGGLVKSAGT 164
Query: 233 N--------FVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQI 283
N + EADE D FL L P V+VVTN++ +H+D + D + +K F FL +
Sbjct: 165 NARLGCSRYLIAEADESDASFLHLQPMVSVVTNIEADHMDTYGGDFEVLKQTFIDFLHNL 224
Query: 284 RVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFN 343
G V+C D R LL +I + +IITYGFS
Sbjct: 225 PFYGLAVMCVDDPVVRELLPRIGR-------------------------QIITYGFSDDA 259
Query: 344 DWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSH 403
D G + + G+P + L IPG HN LN+ A +A D
Sbjct: 260 DVRIVEYKQYAHQGH-FTIVRAGKPDLNVKLNIPGKHNALNATAAVAVATEEGVDD---- 314
Query: 404 ESIACLKLPLSKFMGVSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNK 459
+ L +F G RRFD +G + DD+ HHP+EV +QAAR + K
Sbjct: 315 ---DAIIRALLEFEGTGRRFDHLGEFDTGNGSVMLVDDYGHHPSEVDVTIQAARAGWEKK 371
Query: 460 ALIAVFQPHTYSRLVVLKDDFANALSEAD 488
L+ +FQPH YSR L +DFA+ L + D
Sbjct: 372 RLVMIFQPHRYSRTRDLYEDFAHVLEQVD 400
>gi|270159084|ref|ZP_06187740.1| UDP-N-acetylmuramate--alanine ligase [Legionella longbeachae
D-4968]
gi|269987423|gb|EEZ93678.1| UDP-N-acetylmuramate--alanine ligase [Legionella longbeachae
D-4968]
Length = 458
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 138/418 (33%), Positives = 212/418 (50%), Gaps = 44/418 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ QG+ ++GSDL S ++ L G +++GH +I+G D
Sbjct: 7 IHFVGIGGVGMCGIAEVLHNQGYRITGSDLGEGSTVQRLKSLGVPVYLGHKAEHIKGAD- 65
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSA+ +N EI+ A+ +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 66 -----VVVRSSAVEWNNPEIVAAREQMIPVIPRAAMLAELMRFRHGIAVAGTHGKTTTTS 120
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+++ VL G D + ++G + + G FV+EADE D FL L P +A+VTN
Sbjct: 121 LVSSVLAEGGLDPSFVIGGKLNSLGINAQL-GQSPYFVVEADESDASFLFLKPMMAIVTN 179
Query: 258 LDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ +E+ + +++ F FL + G V+C D R +L I++ T
Sbjct: 180 IDADHMGTYENNFEKLRTTFLEFLHHLPFYGSAVVCIDDPEVRKILPFIERPT------- 232
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+TYGF+ + A N ++ + +I Q
Sbjct: 233 ------------------LTYGFTEEAHYRAIDWTQNELISEFTVIRPKSYSPLKIQFQY 274
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----GC 432
PG HNVLN+LA IA L D + L KF GV RRF ++G
Sbjct: 275 PGRHNVLNALASIAIATQLGVDDN-------SIIRALEKFQGVGRRFQMLGEKKFEKGSA 327
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP E+ + + A R +PNK L+ VFQPH Y+R L++ F + LS AD++
Sbjct: 328 LVVDDYGHHPQEILSTIDAFRHVWPNKRLVHVFQPHRYTRTQELQEQFVDVLSLADEL 385
>gi|302541868|ref|ZP_07294210.1| UDP-N-acetylmuramate-alanine ligase [Streptomyces hygroscopicus
ATCC 53653]
gi|302459486|gb|EFL22579.1| UDP-N-acetylmuramate-alanine ligase [Streptomyces himastatinicus
ATCC 53653]
Length = 485
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 142/418 (33%), Positives = 215/418 (51%), Gaps = 40/418 (9%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
HF+GIGG+G+S +AK+ +++G V+GSD S + L E GA +H+GH+ N+ +
Sbjct: 15 HFIGIGGAGMSGVAKVLVQRGARVAGSDSKDSPIVAALRELGATVHLGHAAGNVASD--- 71
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
+VV SSAI DN+E++ A+ G+P+ R LA L + + IAV+G+HGK+TT SM
Sbjct: 72 --ATSVVVSSAIRADNLELVAARERGIPVVHRSDALAALMDGHRPIAVAGTHGKTTTTSM 129
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
LA L+ +G D + ++G + P S +GGG+ FV EADE D F +P VA++ N+
Sbjct: 130 LAVSLRTLGLDPSYVIGGDL-DAPGSSAEHGGGEIFVAEADESDRSFHKYAPEVAIILNV 188
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVV 318
+ +H + D + FR F++++R GG LVI D AR L Q+ GL
Sbjct: 189 ELDHHANYASMDEIYDSFRTFVERVRPGGTLVISADHDGARELTAQLAGREGL------- 241
Query: 319 SNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA----QISL 374
+++TYG ++ D V P+ G + + L ++
Sbjct: 242 --------------RVLTYGEAADADVRVLDVVPH--GLTSEVTVRFAEALGGGEITFTV 285
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHI 434
+PG H N++A +A L R +IA + GV RR L GT +
Sbjct: 286 SVPGRHYAHNAVAALAAGAALDVPARDLAPAIAS-------YTGVKRRLQLKGTAAEVQV 338
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
D +AHHPTE+ A L+A R ++ VFQPH +SR L + AL+ AD VV
Sbjct: 339 IDSYAHHPTEIAADLEAIRGGAGEGRVLVVFQPHLFSRTQELGAEMGEALALADASVV 396
>gi|239907962|ref|YP_002954703.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfovibrio magneticus
RS-1]
gi|259509768|sp|C4XK68.1|MURC_DESMR RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|239797828|dbj|BAH76817.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfovibrio magneticus
RS-1]
Length = 457
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 144/425 (33%), Positives = 215/425 (50%), Gaps = 41/425 (9%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
+N+ IH +GIGGSG+S +A++ L G+EVSGSDL S + L GA++ IGH
Sbjct: 1 MRNKVRKIHMIGIGGSGMSGIAEVLLNLGYEVSGSDLSMSQTVRRLGSLGASIAIGHGRE 60
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N+ D VV S+A+ DN E++ A+ G+P+ R LA+L IAV+G+H
Sbjct: 61 NLGDAD------VVVKSTAVTSDNPEVVVARERGIPVIPRAEMLAELMRLRTGIAVAGTH 114
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S+LA + G D T I+G + + G+ G G+ + EADE DG FL LSP
Sbjct: 115 GKTTTTSLLATIFTEAGYDPTVIIGGRLNAYGAGARL-GQGEYLIAEADESDGSFLCLSP 173
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
+VVTN+D +H+D ++ +A+ F FL I G V+C D +L ++ +
Sbjct: 174 IASVVTNVDADHLDHYDGIEAIDDAFVDFLNNIPFYGVNVVCLDDPGVARILPRVNR--- 230
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
I+TYGFS + S + + G+ L
Sbjct: 231 ----------------------PILTYGFSDKARLRGRIIDSGAM--SCFEVSLDGKRLG 266
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
++ L PG HNVLN+L I L + + + L+KF GV RRF+ G
Sbjct: 267 EMRLNHPGRHNVLNALGAIGVSL-------EVGIPLGTIAEALAKFAGVGRRFERKGEKD 319
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
G + DD+ HHP E++A L AR +P + L+ FQPH +SR L DF AD++
Sbjct: 320 GVVVVDDYGHHPAEIKATLATARAVYPERRLVVAFQPHRFSRTKALFGDFCTCFEAADEL 379
Query: 491 VVSAV 495
+++ +
Sbjct: 380 LLTEI 384
>gi|407804260|ref|ZP_11151086.1| UDP-N-acetylmuramate--L-alanine ligase [Alcanivorax sp. W11-5]
gi|407021789|gb|EKE33550.1| UDP-N-acetylmuramate--L-alanine ligase [Alcanivorax sp. W11-5]
Length = 484
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 151/429 (35%), Positives = 216/429 (50%), Gaps = 51/429 (11%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
+V R IHFVGIGG G+ +A++ QG+EVSGSDL S + L E G + IGH
Sbjct: 18 VVPEMRRIRRIHFVGIGGVGMCGIAEVLCNQGYEVSGSDLRESPVVTRLRELGVRVDIGH 77
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
+ N++G D VV S+A+ N E+L A +P+ R LA+L + IAV+
Sbjct: 78 AAKNVEGVD------VVVTSTAVASSNEEVLAANKARIPVVPRAEMLAELMRFRHGIAVA 131
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT SM A ++ G D T ++G + + G + V EADE D FL
Sbjct: 132 GTHGKTTTTSMTASIMAEAGMDPTFVIGGRLTSAGTNARL-GQSRYLVAEADESDASFLH 190
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDA-VKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 306
L P A+VTN+D +H+ + + A +++ F FL + G V+C D R LL ++
Sbjct: 191 LQPMSAIVTNIDADHMHTYGGDFARLENTFIEFLHNLPFYGLAVLCIDDPVVRRLLPRVN 250
Query: 307 QDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERG 366
+ ++I YGF D E + QG S RG
Sbjct: 251 R-------------------------QVIRYGFDEDADVRGEVMTQ--QGMSTRFRVLRG 283
Query: 367 R--PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFD 424
PL +I++ +PG HNVLN+LA IA D+ ++I L KF GV RRFD
Sbjct: 284 DSAPL-EITINLPGRHNVLNALAAIAVAA----DEGAPDDAIV---RGLEKFTGVGRRFD 335
Query: 425 LIGTIYG-----CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDD 479
++G YG + DD+ HHP EV+ + A R +P+K L+ +FQPH Y+R L +D
Sbjct: 336 VLGD-YGFSAGKAMLVDDYGHHPREVKVTIDAIRAGWPDKRLVMLFQPHRYTRTRDLYED 394
Query: 480 FANALSEAD 488
F LS D
Sbjct: 395 FVEVLSGVD 403
>gi|429124931|ref|ZP_19185463.1| UDP-N-acetylmuramate--L-alanine ligase [Brachyspira hampsonii
30446]
gi|426278993|gb|EKV56020.1| UDP-N-acetylmuramate--L-alanine ligase [Brachyspira hampsonii
30446]
Length = 462
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 147/429 (34%), Positives = 223/429 (51%), Gaps = 44/429 (10%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
F RK IHF+GIGG G+SA+A + GF V+GSDL ++ E L +G ++ GH
Sbjct: 2 FTKRKEKIHFIGIGGIGMSAIASVLNAIGFTVTGSDLAKTAKTESLESSGIKVYYGHKAQ 61
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
NI+ + AVV SSAI N EI+ AK+ + + R LA+L IA+SGSH
Sbjct: 62 NIEDD-----VTAVVTSSAISPTNEEIIEAKAKKITVIPRGEMLAELMRLRYGIAISGSH 116
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGA-HVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLS 249
GK+TT S+++ ++ G + I+G H + S + V EADE DG FL LS
Sbjct: 117 GKTTTTSLISQIMMHAGLNPVCIIGGNHFNLKSNASCNDLSSEYMVCEADESDGSFLRLS 176
Query: 250 PSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
P + VVTN+D +H+D + + +A++ F F+ ++ G +C + + L
Sbjct: 177 PVINVVTNIDNDHLDYYGNVEALRVAFLEFINKVPFYGCSFLCFEDNVVKDL-------- 228
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE-RGRP 368
+ + K +YGFS D+Y + V+ Y +
Sbjct: 229 -----------------SKSANKKYYSYGFSKDYDFYVDRDSIRVEAPITYFTAYYDNKC 271
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
L + S+ + G+HNVLNSLA I + L D I +K L F GV RR +
Sbjct: 272 LGEFSVPLIGIHNVLNSLASIGVGIHLGID-------IDDIKEGLKTFEGVGRRLN---K 321
Query: 429 IYGCHI--YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
+Y I +DD+AHHPTE++A L + + + N+ +IAVFQPH YSR +L +DF +A ++
Sbjct: 322 LYDKEITLFDDYAHHPTEIKATLSSVKNAYKNRRIIAVFQPHRYSRTELLLNDFESAFND 381
Query: 487 ADQVVVSAV 495
AD+V++S +
Sbjct: 382 ADEVIISDI 390
>gi|414167980|ref|ZP_11424184.1| UDP-N-acetylmuramate-L-alanine ligase [Afipia clevelandensis ATCC
49720]
gi|410888023|gb|EKS35827.1| UDP-N-acetylmuramate-L-alanine ligase [Afipia clevelandensis ATCC
49720]
Length = 481
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 152/429 (35%), Positives = 227/429 (52%), Gaps = 52/429 (12%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G+ V GSD ++ + L + G + IGH N+ G
Sbjct: 22 GPIHFVGIGGIGMSGIAEVLCNLGYTVQGSDASENANVTRLRDKGIKISIGHKAENVNGA 81
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D +V S+AI +DN E++ A+ + +P+ +R LA+L + IA++G+HGK+TT
Sbjct: 82 D------VMVVSTAIKRDNPELVAARGLRIPVVRRAEMLAELMRLKSCIAIAGTHGKTTT 135
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L A D T I G + + + G G+ V+EADE DG FL L VA+V
Sbjct: 136 TSMVATLLDAGALDPTVINGGIINAYGTNARL-GAGEWMVVEADESDGTFLKLPVDVAIV 194
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D F+ DAV+ F+ F++ + G V+C D ++L+ +I+
Sbjct: 195 TNVDPEHLDHFKTFDAVQEAFKDFVEGVPFYGFAVMCIDHPVVQTLVGKIE--------- 245
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER------GRPL 369
D +IITYG + D + P GGS + + R G +
Sbjct: 246 ---------------DRRIITYGENPQADARLVDLEP-FSGGSKFEVEFRHRKTQVGHRI 289
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHE---SIACLKLPLSKFMGVSRRFDLI 426
+ + L +PG HN LN+ A IA +HE S ++ L+ F GV RRF
Sbjct: 290 SDLVLPMPGRHNALNATAAIAV----------AHEIGISDDAIRKALAGFGGVKRRFTRT 339
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G G I DD+ HHP E+ AVL+AAR K +IAV QPH Y+RL L ++F ++
Sbjct: 340 GEWNGVTIIDDYGHHPVEIAAVLKAARDSTKGK-VIAVVQPHRYTRLQSLFEEFCTCFND 398
Query: 487 ADQVVVSAV 495
AD V+V+ +
Sbjct: 399 ADTVIVADI 407
>gi|289166080|ref|YP_003456218.1| UDP-N-acetylmuramate--L-alanine ligase [Legionella longbeachae
NSW150]
gi|288859253|emb|CBJ13187.1| UDP-N-acetylmuramate--L-alanine ligase [Legionella longbeachae
NSW150]
Length = 469
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 138/418 (33%), Positives = 212/418 (50%), Gaps = 44/418 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ QG+ ++GSDL S ++ L G +++GH +I+G D
Sbjct: 18 IHFVGIGGVGMCGIAEVLHNQGYRITGSDLGEGSTVQRLKSLGVPVYLGHKAEHIKGAD- 76
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSA+ +N EI+ A+ +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 77 -----VVVRSSAVEWNNPEIVAAREQMIPVIPRAAMLAELMRFRHGIAVAGTHGKTTTTS 131
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+++ VL G D + ++G + + G FV+EADE D FL L P +A+VTN
Sbjct: 132 LVSSVLAEGGLDPSFVIGGKLNSLGINAQL-GQSPYFVVEADESDASFLFLKPMMAIVTN 190
Query: 258 LDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ +E+ + +++ F FL + G V+C D R +L I++ T
Sbjct: 191 IDADHMGTYENNFEKLRTTFLEFLHHLPFYGSAVVCIDDPEVRKILPFIERPT------- 243
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+TYGF+ + A N ++ + +I Q
Sbjct: 244 ------------------LTYGFTEEAHYRAIDWTQNELISEFTVIRPKSYSPLKIQFQY 285
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----GC 432
PG HNVLN+LA IA L D + L KF GV RRF ++G
Sbjct: 286 PGRHNVLNALASIAIATQLGVDDN-------SIIRALEKFQGVGRRFQMLGEKKFEKGSA 338
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP E+ + + A R +PNK L+ VFQPH Y+R L++ F + LS AD++
Sbjct: 339 LVVDDYGHHPQEILSTIDAFRHVWPNKRLVHVFQPHRYTRTQELQEQFVDVLSLADEL 396
>gi|342904145|ref|ZP_08725947.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus haemolyticus
M21621]
gi|342904554|ref|ZP_08726353.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus haemolyticus
M21621]
gi|341952975|gb|EGT79489.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus haemolyticus
M21621]
gi|341954154|gb|EGT80648.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus haemolyticus
M21621]
Length = 475
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 145/465 (31%), Positives = 235/465 (50%), Gaps = 68/465 (14%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+ R IHF+GIGG+G+S +A++ L +G+++SGSD+ + L +AGA ++IGH
Sbjct: 11 IIPEMRRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGLVTQRLTQAGAKIYIGH 70
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
+ +I+G + VV SSAI DN E++ AK +P+ +R LA++ + IAV+
Sbjct: 71 AEEHIEG------ASVVVVSSAIKDDNPELVAAKQKRIPVIQRAQMLAEIMRFRHGIAVA 124
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEAD 239
G+HGK+TT +M++ + D P F +G + GKN + EAD
Sbjct: 125 GTHGKTTTTAMISMIYTQAKLD---------PTFVNGGLVKSAGKNAHLGASRYLIAEAD 175
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCA 298
E D FL L P V+VVTN++ +H+D +E D + +K+ + +FL + G V+C D
Sbjct: 176 ESDASFLHLQPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLPFYGLAVMCADDPVL 235
Query: 299 RSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS 358
L+ ++ + ++ITYGFS D+ E G
Sbjct: 236 MELVPKVGR-------------------------QVITYGFSEHADYRIEDYEQTGFQGH 270
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
++C + + L +PG HN LN+ A +A K + + A L+ L+ F G
Sbjct: 271 YTVICPNNERI-NVLLNVPGKHNALNATAALAVA------KEEGIGNEAILE-ALADFQG 322
Query: 419 VSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
RRFD +G + DD+ HHPTEV ++AAR+ + +K ++ +FQPH YSR
Sbjct: 323 AGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVGVTIKAAREGWGDKRIVMIFQPHRYSRTR 382
Query: 475 VLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
L DDF LS+ D +++ L ++A ++ A + +C
Sbjct: 383 DLFDDFVQVLSQVDALIM-------LDVYAAGETPIVGADSKSLC 420
>gi|417839932|ref|ZP_12486093.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus haemolyticus
M19107]
gi|341951325|gb|EGT77900.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus haemolyticus
M19107]
Length = 475
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 146/465 (31%), Positives = 235/465 (50%), Gaps = 68/465 (14%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+ R IHF+GIGG+G+S +A++ L +G+++SGSD+ + L +AGA ++IGH
Sbjct: 11 IIPEMRRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGLVTQRLTQAGAKIYIGH 70
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
+ +I+G + VV SSAI DN E++ AK +P+ +R LA++ + IAV+
Sbjct: 71 AEEHIEG------ASVVVVSSAIKDDNPELVAAKQKRIPVIQRAQMLAEIMRFRHGIAVA 124
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEAD 239
G+HGK+TT +M++ + D P F +G + GKN + EAD
Sbjct: 125 GTHGKTTTTAMISMIYTQAKLD---------PTFVNGGLVKSAGKNAHLGASRYLIAEAD 175
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCA 298
E D FL L P V+VVTN++ +H+D +E D + +K+ + +FL + G V+C D
Sbjct: 176 ESDASFLHLQPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLPFYGLAVMCADDPVL 235
Query: 299 RSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS 358
L+ ++ + ++ITYGFS D+ E G
Sbjct: 236 MELVPKVGR-------------------------QVITYGFSEHADYRIEDYEQTGFQGH 270
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
++C + + L +PG HN LN+ A +A K + + A L+ L+ F G
Sbjct: 271 YTVICPDNERI-NVLLNVPGKHNALNATAALAVA------KEEGIGNEAILE-ALADFQG 322
Query: 419 VSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
RRFD +G + DD+ HHPTEV ++AAR+ + +K ++ VFQPH YSR
Sbjct: 323 AGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVGVTIKAAREGWGDKRIVMVFQPHRYSRTR 382
Query: 475 VLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
L DDF LS+ D +++ L ++A ++ A + +C
Sbjct: 383 DLFDDFVQVLSQVDALIM-------LDVYAAGEAPIVGADSKSLC 420
>gi|54295451|ref|YP_127866.1| UDP-N-acetylmuramate--L-alanine ligase [Legionella pneumophila str.
Lens]
gi|59798133|sp|Q5WTI7.1|MURC_LEGPL RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|53755283|emb|CAH16777.1| UDP-N-acetylmuramate--L-alanine ligase [Legionella pneumophila str.
Lens]
Length = 469
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 143/436 (32%), Positives = 228/436 (52%), Gaps = 48/436 (11%)
Query: 64 NEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANL 123
+E+ + R IHFVGIGG+G+ +A++ QG+ ++GSDL S ++ L G +
Sbjct: 4 SEQFLSPRMGRVEQIHFVGIGGAGMCGIAEVLHNQGYRITGSDLGESGTVQRLRSLGIQV 63
Query: 124 HIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL 183
+IGH + NI+G D VV SSA+ +N EI+ A+ + +P+ R LA+L +
Sbjct: 64 YIGHRLENIKGAD------VVVRSSAVDFNNPEIVAARELMIPVIPRAAMLAELMRFRHG 117
Query: 184 IAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDG 243
IA++G+HGK+TT S+++ +L G D + ++G + + G FV+EADE D
Sbjct: 118 IAIAGTHGKTTTTSLVSSLLAEGGLDPSFVIGGKLNSCGANAQL-GKSAYFVVEADESDA 176
Query: 244 CFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLL 302
FL L P +AVVTN+D +H+D +E D + +++ F FL + G V+C + + +L
Sbjct: 177 SFLFLKPMMAVVTNIDADHMDTYEGDFEKLRTTFLEFLHHLPFYGLAVVCLEDEEICRIL 236
Query: 303 DQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYIL 362
I++ T +TYGF + + ++ +G +
Sbjct: 237 PAIQRPT-------------------------LTYGFK--EEAHYRAINWTQKGMLSEFV 269
Query: 363 CERGRPLAQISLQI--PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVS 420
R P Q+++Q PG HNVLN+LA IA L D +SI L KF GV
Sbjct: 270 VVRPAPHKQLTIQFQYPGRHNVLNALASIAIATELGVDD----DSIV---RGLQKFQGVG 322
Query: 421 RRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVL 476
RRF ++G I DD+ HHP E+ + + A R+ +P + L+ VFQPH Y+R L
Sbjct: 323 RRFQMLGEKQFEKGAAIIVDDYGHHPQEILSTIDAFRRVWPERRLVHVFQPHRYTRTQSL 382
Query: 477 KDDFANALSEADQVVV 492
F +ALS +D++++
Sbjct: 383 HRQFVDALSLSDELLL 398
>gi|365837153|ref|ZP_09378533.1| UDP-N-acetylmuramate--L-alanine ligase [Hafnia alvei ATCC 51873]
gi|364562731|gb|EHM40565.1| UDP-N-acetylmuramate--L-alanine ligase [Hafnia alvei ATCC 51873]
Length = 500
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 147/435 (33%), Positives = 220/435 (50%), Gaps = 54/435 (12%)
Query: 66 ECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHI 125
+V R IHFVGIGG+G+ +A++ +G+++SGSDL + + L E GA ++
Sbjct: 14 RTMVPEMRRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNPVTQQLTELGAQIYF 73
Query: 126 GHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIA 185
H N++ D S VV S+AI DN EI+ A+ +P+ +R LA+L + IA
Sbjct: 74 HHRPENVK--DAS----VVVVSTAISADNPEIVAAREARIPVIRRAEMLAELMRFRHGIA 127
Query: 186 VSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCF 245
++G+HGK+TT +M++ + G D T + G V + G + + EADE D F
Sbjct: 128 IAGTHGKTTTTAMVSSIYAEAGLDPTFVNGGLV-KAAGTHARLGSSRYLIAEADESDASF 186
Query: 246 LGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 304
L L P VAVVTN++ +H+D + D + +K F FL + G V+C D R LL +
Sbjct: 187 LHLQPMVAVVTNIEADHMDTYHGDFENLKQTFINFLHNLPFYGRAVMCIDDPVVRELLPR 246
Query: 305 IKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE 364
+ + I TYGFS D ES N G+ + +C
Sbjct: 247 VGR-------------------------HITTYGFSEDADVRIESYQQNGAQGT-FFICR 280
Query: 365 RGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKL--PLSKFMGVSRR 422
+ +P ++L PG HN LN+ A ++ + E IA + L F G RR
Sbjct: 281 QDKPRLAVTLNAPGRHNALNAAAAVSVA---------TEEGIADEDILRALEGFQGTGRR 331
Query: 423 FDLIG-----TIYG----CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRL 473
FD +G + G + DD+ HHPTEV A ++AAR +PN+ L+ +FQPH ++R
Sbjct: 332 FDFLGEYALENVNGKAGKAMLVDDYGHHPTEVDATIKAARAGWPNRRLVMIFQPHRFTRT 391
Query: 474 VVLKDDFANALSEAD 488
L DDFAN LS+ D
Sbjct: 392 RDLYDDFANVLSQVD 406
>gi|303327347|ref|ZP_07357788.1| UDP-N-acetylmuramate--alanine ligase [Desulfovibrio sp. 3_1_syn3]
gi|302862287|gb|EFL85220.1| UDP-N-acetylmuramate--alanine ligase [Desulfovibrio sp. 3_1_syn3]
Length = 457
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 136/418 (32%), Positives = 216/418 (51%), Gaps = 41/418 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH VGIGG+G+S +A++ L QG+E+SGSDL S+ + L E GA + +GH+ N+
Sbjct: 8 IHMVGIGGAGMSGIAEVLLNQGYEISGSDLSDSAVVRHLRELGARVAVGHAAENVGDV-- 65
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V S+AI DN E++ + + I R LA+L IA++G+HGK+TT S
Sbjct: 66 ----QVLVKSTAIGDDNPELVEGRRRNIAIIPRAEMLAELMRLRQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+ A + G D T I+G + + + G G + EADE DG FL L P + VVTN
Sbjct: 122 LTASIFDTAGLDPTVIIGGRLNVYGTNA-HLGHGDYLIAEADESDGSFLCLLPIINVVTN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D +H+D ++ +A+ + F +F+ + G V+CGD R+LL ++K+
Sbjct: 181 VDEDHLDHYKSREAIDAAFVQFMNNVPFYGINVVCGDDPGVRALLPRVKR---------- 230
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
++TYGF++ N A + ++ S + + L ++SL P
Sbjct: 231 ---------------PVLTYGFAADNHLRAVPLESGLR--SRFEVWREDEKLGEVSLPQP 273
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD 437
G HN+LN+LA I + ++ + L F GV RRF+ G G + DD
Sbjct: 274 GRHNILNALAAIGAAM-------EADIAFERCARGLGGFGGVGRRFEFKGEKDGVTVVDD 326
Query: 438 FAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
+ HHP E+ A L ARQ FP + ++A FQPH +SR +F + D+V+++ +
Sbjct: 327 YGHHPAEIAATLATARQVFPGRRIVAAFQPHRFSRTQAHFGEFCKVFDQVDEVLLTEI 384
>gi|397169234|ref|ZP_10492669.1| UDP-N-acetylmuramate--L-alanine ligase [Alishewanella aestuarii
B11]
gi|396089314|gb|EJI86889.1| UDP-N-acetylmuramate--L-alanine ligase [Alishewanella aestuarii
B11]
Length = 484
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 144/427 (33%), Positives = 222/427 (51%), Gaps = 49/427 (11%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
R IHFVGIGG+G+ +A++ L +G++VSGSD+ + E L+ GA + GH+ S++
Sbjct: 13 RRVERIHFVGIGGAGMGGIAEVLLNEGYKVSGSDIAPGAVTERLISLGAEIVFGHAASHV 72
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
QG + VV SSAI Q+N E+ A+ +P+ +R L +L + IA++G+HGK
Sbjct: 73 QG------ASVVVVSSAIKQENPEVAAAREQRIPVVRRAEMLGELMRFRHGIAIAGTHGK 126
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+TT S++A V G D T ++G + + G G+ + EADE D FL L P
Sbjct: 127 TTTTSLMASVFAEAGADPTFVIGGLLNSAGSNARL-GAGRYLIAEADESDASFLHLQPMA 185
Query: 253 AVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
V+TN++ +H+D ++ D + +K+ + FL + G V+C D R L+ QI +
Sbjct: 186 TVITNIEADHMDTYQGDFEKLKATYLEFLHNLPFYGLAVVCLDDAVLRGLIPQIGR---- 241
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPL 369
++TYGFS D+ + Q G S +++ +
Sbjct: 242 ---------------------TVLTYGFSEDADY---RISEFSQQGTRSQFVITDPAGNQ 277
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
+ISL +PG HN LN+ AV A L D+ + ++I LSKF G+ RRF G
Sbjct: 278 REISLNLPGRHNALNATAVFA----LAQDEGIAEQAILA---ALSKFEGIGRRFQQYGEF 330
Query: 430 YGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
+ DD+ HHPTEV A + A R +P + L+ +QPH Y+R L DDFA LS
Sbjct: 331 DTGRGKVLLLDDYGHHPTEVAATVAAVRSAWPQRRLVMCYQPHRYTRTRDLYDDFARVLS 390
Query: 486 EADQVVV 492
E D +++
Sbjct: 391 EVDTLLL 397
>gi|317493278|ref|ZP_07951700.1| UDP-N-acetylmuramate-alanine ligase [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316918671|gb|EFV40008.1| UDP-N-acetylmuramate-alanine ligase [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 500
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 147/434 (33%), Positives = 220/434 (50%), Gaps = 54/434 (12%)
Query: 67 CIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG 126
+V R IHFVGIGG+G+ +A++ +G+++SGSDL + + L E GA ++
Sbjct: 15 TMVPEMRRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNPVTQQLTELGAQIYFH 74
Query: 127 HSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAV 186
H N++ D S VV S+AI DN EI+ A+ +P+ +R LA+L + IA+
Sbjct: 75 HRPENVK--DAS----VVVVSTAISADNPEIVAAREARIPVIRRAEMLAELMRFRHGIAI 128
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
+G+HGK+TT +M++ + G D T + G V + G + + EADE D FL
Sbjct: 129 AGTHGKTTTTAMVSSIYAEAGLDPTFVNGGLV-KAAGTHARLGSSRYLIAEADESDASFL 187
Query: 247 GLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 305
L P VAVVTN++ +H+D + D + +K F FL + G V+C D R LL ++
Sbjct: 188 HLQPMVAVVTNIEADHMDTYHGDFENLKQTFINFLHNLPFYGRAVMCIDDPVVRELLPRV 247
Query: 306 KQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER 365
+ I TYGFS D ES N G+ + +C +
Sbjct: 248 GR-------------------------HITTYGFSEDADVRIESYQQNGAQGT-FFICRQ 281
Query: 366 GRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKL--PLSKFMGVSRRF 423
+P ++L PG HN LN+ A ++ + E IA + L F G RRF
Sbjct: 282 DKPRLAVTLNAPGRHNALNAAAAVSVA---------TEEGIADEDILRALEGFQGTGRRF 332
Query: 424 DLIG-----TIYG----CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
D +G + G + DD+ HHPTEV A ++AAR +PN+ L+ +FQPH ++R
Sbjct: 333 DFLGEYALENVNGKEGKAMLVDDYGHHPTEVDATIKAARAGWPNRRLVMIFQPHRFTRTR 392
Query: 475 VLKDDFANALSEAD 488
L DDFAN LS+ D
Sbjct: 393 DLYDDFANVLSQVD 406
>gi|402829660|ref|ZP_10878534.1| UDP-N-acetylmuramate--L-alanine ligase [Slackia sp. CM382]
gi|402283656|gb|EJU32167.1| UDP-N-acetylmuramate--L-alanine ligase [Slackia sp. CM382]
Length = 463
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 223/421 (52%), Gaps = 44/421 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HFVG+GG G+S +A++A G VSGSD+ S+Y + L+ AG + +GH +N+
Sbjct: 10 VHFVGVGGVGMSGIARVAADFGMAVSGSDMATSAYTDQLVAAGIRVFVGHDAANVD---- 65
Query: 138 SRFP--NAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
P + VVAS+A+P N E++ A+ +G+P+++R + LA+L +A +G+HGK+TT
Sbjct: 66 ---PACDVVVASTAVPDTNPEVMRARELGIPVWQRAHMLAELGRGKKTLAAAGTHGKTTT 122
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
+SMLA + A+G D T IVG V + + G G +V+EADE DG FL LSP VA+V
Sbjct: 123 SSMLAGAVDALGLDPTFIVGGMVDAYRTNAK-SGMGDYYVVEADESDGSFLNLSPYVALV 181
Query: 256 TNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYS 314
TN++ +H+D + D +++ F+ F+ + G LV+CG+ L ++ + TG
Sbjct: 182 TNVEADHLDHYVGGIDEIRATFKTFMASVPADGALVVCGEDPS----LAELAESTG---- 233
Query: 315 GGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISL 374
++++YGFS D + + + G +
Sbjct: 234 -----------------RRVVSYGFSPACDVRVSDYATHGVSSTFTLSFPDGTVVESGLA 276
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHI 434
+ PG HN LN+ V+ + L D +A ++ + GV RRFDL G G +
Sbjct: 277 KNPGRHNALNAAGVLGVIWALGLD-------VASASAGIASYSGVRRRFDLKGEAAGVAV 329
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSA 494
DD+AHHPTE+ A L AA N+ + +FQPH YSR L D+F A + D + V
Sbjct: 330 VDDYAHHPTEIAATLAAATGLDFNRVHV-IFQPHRYSRTASLADEFGPAFAGVDSLTVLG 388
Query: 495 V 495
V
Sbjct: 389 V 389
>gi|357975770|ref|ZP_09139741.1| UDP-N-acetylmuramate--L-alanine ligase [Sphingomonas sp. KC8]
Length = 471
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 141/403 (34%), Positives = 216/403 (53%), Gaps = 47/403 (11%)
Query: 99 GFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEIL 158
G++V GSD+ +EGL + G + IGH N+ D + VV S+AI + N E+
Sbjct: 32 GYKVQGSDVAEGYVVEGLRKRGIAVSIGHKAENL--GDAA----VVVTSTAIKRGNPEVE 85
Query: 159 HAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHV 218
A +P+ +R LA+L + +A++G+HGK+TT SM+A +L A G D T I G +
Sbjct: 86 LALERRIPVVRRAEMLAELMRLKSTVAIAGTHGKTTTTSMVAALLDAGGVDPTVINGGII 145
Query: 219 PQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRR 278
+ + G V+EADE DG FL L ++AVVTN+D EH+D + DAVK F
Sbjct: 146 NSYGSNARL-GASDWMVVEADESDGSFLRLDGTIAVVTNIDPEHLDHYGSFDAVKDAFVE 204
Query: 279 FLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYG 338
F++ + G ++C D ++++ +++ D +++TYG
Sbjct: 205 FVENVPFYGAALLCLDHPEVQAVIPRVR------------------------DRRVVTYG 240
Query: 339 FSSFNDWYAESVCPNVQGGSDY--ILCERG---RPLAQISLQIPGVHNVLNSLAVIATVL 393
FS+ D +V P + GG+ + I+ ER R + I L +PG HNV N+LA I +
Sbjct: 241 FSAQADVRGVNVTP-IPGGNRFETIIRERDGTTRSIEGIELPMPGRHNVQNALAAIGVAI 299
Query: 394 TL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAA 452
+ I D ++ SKF GV RRF +G + G + DD+ HHP E+RAVL AA
Sbjct: 300 EMGIPDD--------VIQTGFSKFGGVKRRFTKVGDVDGITVIDDYGHHPVEIRAVLSAA 351
Query: 453 RQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
R+ + +IAV QPH ++RL L D+F +A ++AD V V+ V
Sbjct: 352 REGAQGR-VIAVVQPHRFTRLHDLMDEFQSAFNDADIVYVAPV 393
>gi|373467624|ref|ZP_09558918.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus sp. oral taxon
851 str. F0397]
gi|371758345|gb|EHO47118.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus sp. oral taxon
851 str. F0397]
Length = 475
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 145/465 (31%), Positives = 236/465 (50%), Gaps = 68/465 (14%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+ R IHF+GIGG+G+S +A++ L +G+++SGSD+ ++ L +AGA ++IGH
Sbjct: 11 IIPEMRRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGLVIQRLTQAGAKIYIGH 70
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
+ +I+G + VV SSAI DN E++ AK +P+ +R LA++ + IAV+
Sbjct: 71 AEEHIEG------ASVVVVSSAIKDDNPELVAAKQKRIPVIQRAQMLAEIMRFRHGIAVA 124
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEAD 239
G+HGK+TT +M++ + D P F +G + GKN + EAD
Sbjct: 125 GTHGKTTTTAMISMIYTQAKLD---------PTFVNGGLVKSAGKNAHLGASRYLIAEAD 175
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCA 298
E D FL L P V+VVTN++ +H+D +E D + +K+ + +FL + G V+C D
Sbjct: 176 ESDASFLHLQPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLPFYGLAVMCADDPVL 235
Query: 299 RSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS 358
L+ ++ + ++ITYGFS D+ E G
Sbjct: 236 MELVPKVGR-------------------------QVITYGFSEHADYRIEDYEQTGFQGH 270
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
++C + + L +PG HN LN+ A +A K + + A L+ L+ F G
Sbjct: 271 YTVICPDNERI-NVLLNVPGKHNALNATAALAVA------KEEGIGNEAILE-ALADFQG 322
Query: 419 VSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
RRFD +G + DD+ HHPTEV ++AAR+ + +K ++ +FQPH YSR
Sbjct: 323 AGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVGVTIKAAREGWGDKRIVMIFQPHRYSRTR 382
Query: 475 VLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
L DDF LS+ D +++ L ++A ++ A + +C
Sbjct: 383 DLFDDFVQVLSQVDALIM-------LDVYAAGEAPIVGADSKSLC 420
>gi|443321022|ref|ZP_21050090.1| UDP-N-acetylmuramate--L-alanine ligase [Gloeocapsa sp. PCC 73106]
gi|442789253|gb|ELR98918.1| UDP-N-acetylmuramate--L-alanine ligase [Gloeocapsa sp. PCC 73106]
Length = 460
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 150/421 (35%), Positives = 217/421 (51%), Gaps = 45/421 (10%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
HF+GIGG G+S LA + K+ F VSGSD+ + E L GA++ SN+Q S
Sbjct: 12 HFIGIGGIGMSGLAYVLAKRRFRVSGSDIRPNHITERLQSVGAHIFTQQQASNLQIFKQS 71
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
P ++ S+AI N E A S G P++ R LA L Y IAVSG+HGK+TT+S+
Sbjct: 72 SLPQ-IIWSTAINNHNCEYKAAISHGFPLFHRSELLAALISDYYSIAVSGTHGKTTTSSL 130
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
L Y+L G D T IVG V + +G+ G GK V EADE DG +P + V+TN+
Sbjct: 131 LGYLLLEAGLDPTIIVGGEVNAW-EGNARLGEGKFLVAEADESDGSLTKHTPKIGVITNI 189
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVV 318
+ +H D ++ + S F+ F +Q + +V C D + R + IK D G ++
Sbjct: 190 ELDHPDHYQSLQQLISTFQTFARQCEL---VVGCLDCETVR---EYIKPDIGYT----LM 239
Query: 319 SNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG-SDYILCERGRPLAQISLQIP 377
+D W Q Y QG S+ + ERG L +I LQIP
Sbjct: 240 DRPEADYWAQNIKY----------------------QGKESEAQIWERGEYLGKIRLQIP 277
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD 437
G HN+ N+LA IA R+ + + L+ F G RRF++ G G + DD
Sbjct: 278 GQHNISNALAAIAV-------GRKLGLAFETISDALAGFSGAKRRFEIRGEYRGAILVDD 330
Query: 438 FAHHPTEVRAVLQAARQRFPN---KALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSA 494
+AHHP+EV A L+AAR + + ++A+FQPH Y+R +FA A +ADQV+++
Sbjct: 331 YAHHPSEVEATLKAARVQAEQGCYQRIVAIFQPHRYTRTQTFLAEFATAFRDADQVIITD 390
Query: 495 V 495
+
Sbjct: 391 I 391
>gi|289422422|ref|ZP_06424265.1| UDP-N-acetylmuramate--L-alanine ligase [Peptostreptococcus
anaerobius 653-L]
gi|289156994|gb|EFD05616.1| UDP-N-acetylmuramate--L-alanine ligase [Peptostreptococcus
anaerobius 653-L]
Length = 451
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 133/419 (31%), Positives = 219/419 (52%), Gaps = 40/419 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GIGG +SALA++ + +G++V+GSD+ S ++ L GA + IG NI +
Sbjct: 3 VHFIGIGGINMSALAEICINKGYKVTGSDMQDSYLIDHLRSLGAKVVIGQKKENITDD-- 60
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKSTTA 196
N V+ ++AI DN E AK + + R +L ++ +Y N IAVSG+HGK++T
Sbjct: 61 ---INMVIYTAAISNDNEEFQAAKEKNILMINRAAFLGQIMREYKNSIAVSGTHGKTSTT 117
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SML+ + D T +VG ++ G++ G ++F+ EA EY FL +P +++V
Sbjct: 118 SMLSTIFNHAEKDPTILVGGNLSTIG-GNVRIGNSEHFITEACEYVDSFLNFNPFISLVL 176
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F D +K+ F +F K + G +I GDS+ + + +K
Sbjct: 177 NIEEDHLDYFSGLDEIKASFNKFGKLLPEDGFFIINGDSENTKDITFDVKA--------- 227
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+I +G ND + + G + + L +G L + L I
Sbjct: 228 ----------------SVIRFGQKDTNDAIISDISYDENGYARFNLKYKGAALGRFDLSI 271
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
G+HNV N+ A I + S+ I +K + ++ GV RRF+ G G + D
Sbjct: 272 YGLHNVYNATAAIVAAIV-------SNIDIDTIKEGIKEYKGVGRRFEKKGEYKGALVID 324
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHPTE++A L +A+ +K + VFQPHTY+R L D+F+ A AD+V+V+ +
Sbjct: 325 DYAHHPTEIKATLASAKNLKKDKMWV-VFQPHTYTRTKALFDEFSQAFHAADKVIVADI 382
>gi|410692395|ref|YP_003623016.1| UDP-N-acetylmuramate--L-alanine ligase
(UDP-N-acetylmuramoyl-L-alanine synthetase) [Thiomonas
sp. 3As]
gi|294338819|emb|CAZ87153.1| UDP-N-acetylmuramate--L-alanine ligase
(UDP-N-acetylmuramoyl-L-alanine synthetase) [Thiomonas
sp. 3As]
Length = 469
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 146/429 (34%), Positives = 218/429 (50%), Gaps = 53/429 (12%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ G+ +SGSDL S+ + L E G + IGH + +Q D
Sbjct: 8 IHFVGIGGAGMSGIAEVLHNLGYAISGSDLSESATVRRLRELGLRVAIGHDAAQVQDAD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
A+V S+A+ DN E+L A++ +P+ R LA+L IA++G+HGK+TT S
Sbjct: 67 -----ALVVSTAVRADNPEVLAARARHIPVVPRAVMLAELMRLKRGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL G D T ++G + + G G+ V+EADE D FL L P +AVVTN
Sbjct: 122 LVASVLAEGGLDPTFVIGGRLNSAGVNAKL-GQGEYIVVEADESDASFLNLLPVMAVVTN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D ++ F F+ ++ G V+C D R ++ + +
Sbjct: 181 IDADHMDTYGHDPARLRHAFVDFIARLPFYGAAVLCVDDAAVRGIMPFVSK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR-----PLAQ 371
I +YGF+ D ++ +G + R PLA
Sbjct: 232 ----------------PITSYGFA--EDAQVRAIDVRAEGAQMHFTVLRRNGVQLPPLA- 272
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG 431
++L +PG HNV N+LA IA L D A ++ L+ F GV RRF G +
Sbjct: 273 VTLNLPGRHNVQNALAAIAVATELNVDD-------AAIQRALAGFTGVGRRFQRYGEVAA 325
Query: 432 CH-----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
H + DD+ HHP E+ A L AAR FP + L+ FQPH Y+R L +DF L E
Sbjct: 326 HHGGHFTLIDDYGHHPVEMAATLAAARGAFPGRRLVLAFQPHRYTRTRDLFEDFVKVLGE 385
Query: 487 ADQVVVSAV 495
AD V+++ V
Sbjct: 386 ADAVLLAEV 394
>gi|441509824|ref|ZP_20991737.1| UDP-N-acetylmuramate--L-alanine ligase [Gordonia aichiensis NBRC
108223]
gi|441446099|dbj|GAC49698.1| UDP-N-acetylmuramate--L-alanine ligase [Gordonia aichiensis NBRC
108223]
Length = 521
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 149/467 (31%), Positives = 225/467 (48%), Gaps = 58/467 (12%)
Query: 56 LTNCTFKRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEG 115
+ + T E +H VGIGG+G+S LA++ L +G +VSGSD S +
Sbjct: 3 IEDVTSAHGEPGAAPLPEELRRVHMVGIGGAGMSGLARILLSRGGQVSGSDAKTSRGIIA 62
Query: 116 LLEAGANLHIGHSVSNIQG-NDGSRFPNAVVAS-SAIPQDNVEILHAKSVGVPIYKRDYW 173
L GA + IGH + + DG P VV + +AIP+ N E++ A+ G+P+ R +
Sbjct: 63 LRARGAQIAIGHDAAALDLLPDG---PTVVVTTHAAIPKTNPELVAARERGIPVLLRPHV 119
Query: 174 LAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN 233
LA L + + V+G+HGK++T SM L+ G D + +G + + + +G G
Sbjct: 120 LAGLMADHRTLLVAGTHGKTSTTSMSVVALQHAGLDPSFAIGGELNESGTNA-HHGSGDV 178
Query: 234 FVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICG 293
FV EADE DG L +P + V+TN++ +H+D F DA ++F F +IR GG L++C
Sbjct: 179 FVAEADESDGSLLEYTPDIVVITNIEVDHLDFFGSVDAYVAVFDEFTARIRAGGTLIVCL 238
Query: 294 DSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYA-ESVCP 352
D +L V +++ L +G + G+ + D A V P
Sbjct: 239 DDPGTVAL----------------VQRRAAQLSARG----VTVLGYGTDADAVAIPDVIP 278
Query: 353 NV-------QGGSDYILCERGRPLAQISLQI------PGVHNVLNSLAVIATVLTLIGDK 399
G +P+ ++++ PG+H NSL I + G+
Sbjct: 279 AATLLSWAPHGAGGLATVRFAQPVVDAAIEVPLTLTTPGIHMARNSLGAILGAVCAGGEL 338
Query: 400 RQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAA------- 452
Q E + F GV RRF+ G+ G +YDD+AHHPTEV AVL AA
Sbjct: 339 DQVIEGV-------EAFGGVRRRFEYKGSAAGVAVYDDYAHHPTEVAAVLAAARGVVGRG 391
Query: 453 ---RQRFPNKA-LIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
R R ++ +IAVFQPH YSR + FA AL AD+V+V+ V
Sbjct: 392 GVERSRGGSRGRVIAVFQPHLYSRTEEFAEQFAAALDAADEVIVADV 438
>gi|145633131|ref|ZP_01788863.1| D-alanine--D-alanine ligase [Haemophilus influenzae 3655]
gi|145635590|ref|ZP_01791288.1| N-acetylglucosaminyl transferase [Haemophilus influenzae PittAA]
gi|148826248|ref|YP_001291001.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus influenzae
PittEE]
gi|229844906|ref|ZP_04465044.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus influenzae
6P18H1]
gi|166224693|sp|A5UCW7.1|MURC_HAEIE RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|144986357|gb|EDJ92936.1| D-alanine--D-alanine ligase [Haemophilus influenzae 3655]
gi|145267152|gb|EDK07158.1| N-acetylglucosaminyl transferase [Haemophilus influenzae PittAA]
gi|148716408|gb|ABQ98618.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus influenzae
PittEE]
gi|229812287|gb|EEP47978.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus influenzae
6P18H1]
Length = 475
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 144/465 (30%), Positives = 236/465 (50%), Gaps = 68/465 (14%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+ R IHF+GIGG+G+S +A++ L +G+++SGSD+ + L +AGA ++IGH
Sbjct: 11 IIPEMRRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGH 70
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
+ +I+G + VV SSAI DN E++ +K +P+ +R LA++ + IAV+
Sbjct: 71 AEEHIEG------ASVVVVSSAIKDDNPELVASKQKRIPVIQRAQMLAEIMRFRHGIAVA 124
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEAD 239
G+HGK+TT +M++ + D P F +G + GKN + EAD
Sbjct: 125 GTHGKTTTTAMISMIYTQAKLD---------PTFVNGGLVKSAGKNAHLGASRYLIAEAD 175
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCA 298
E D FL L P V+VVTN++ +H+D +E D + +K+ + +FL + G V+C D
Sbjct: 176 ESDASFLHLQPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLPFYGLAVMCADDPVL 235
Query: 299 RSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS 358
L+ ++ + ++ITYGFS D+ E G
Sbjct: 236 MELVPKVGR-------------------------QVITYGFSEQADYRIEDYEQTGFQGH 270
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
++C + + L +PG HN LN+ A +A K + ++ A L+ L+ F G
Sbjct: 271 YTVICPNNERI-NVLLNVPGKHNALNATAALAIA------KEEGIDNEAILE-ALADFQG 322
Query: 419 VSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
RRFD +G + DD+ HHPTEV ++AAR+ + +K ++ +FQPH YSR
Sbjct: 323 AGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVGVTIKAAREGWGDKRIVMIFQPHRYSRTR 382
Query: 475 VLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
L DDF LS+ D +++ L ++A ++ A + +C
Sbjct: 383 DLFDDFVQVLSQVDALIM-------LDVYAAGEAPIVGADSKSLC 420
>gi|221194726|ref|ZP_03567783.1| UDP-N-acetylmuramate--alanine ligase [Atopobium rimae ATCC 49626]
gi|221185630|gb|EEE18020.1| UDP-N-acetylmuramate--alanine ligase [Atopobium rimae ATCC 49626]
Length = 470
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 148/424 (34%), Positives = 224/424 (52%), Gaps = 49/424 (11%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
HF+GIGG+G+S +A + ++G V+GSDL S Y+ L EAG +HIGH + I
Sbjct: 13 HFIGIGGAGMSGIALVLHERGCTVTGSDLKSSRYVRELEEAGIRVHIGHVAATID----E 68
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
P+ VV SSAIP+ N E++ A+ +G+PI+ R L+ L+ IAV+G+HGK+TT+SM
Sbjct: 69 VQPDVVVTSSAIPETNPEVIRARELGLPIWPRAKMLSYLSRGRKTIAVAGTHGKTTTSSM 128
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
+A +L M D + ++G V + D + G G FV EADE DG F+ L+P+V V+TN+
Sbjct: 129 IATMLDKMDLDPSFLIGGVVEGY-DTNGRNGSGDYFVCEADESDGSFMYLTPNVIVITNI 187
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDS----QCARSLLDQIKQDTGLKYS 314
+ +H+D + + ++ F F++ + ++I GD+ + ARS TG
Sbjct: 188 EADHLDHYGTLENIEKTFCDFMRLLDPSETVIINGDNPHWVELARS--------TG---- 235
Query: 315 GGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSD--YILCERGRPLAQI 372
K+++YGFS D+ + QG + + G + +
Sbjct: 236 -----------------RKVVSYGFSETCDYVCRARM-RTQGIENPLSVTTPSGACIDVV 277
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC 432
PG HN+ N+ A +AT L D ++ + LS+F G RRF +G I G
Sbjct: 278 LPASPGTHNIANACAALATADILGYDLSEAARA-------LSQFKGARRRFTHVGDICGI 330
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+ DD+ HHPTE++A L AA K +I VFQPH YSR L D FA+A D ++V
Sbjct: 331 TVVDDYGHHPTEIKATLSAALP-LGFKRVICVFQPHRYSRTKDLADLFAHAFDGVDTLLV 389
Query: 493 SAVL 496
V
Sbjct: 390 MDVF 393
>gi|389793108|ref|ZP_10196283.1| UDP-N-acetylmuramate--L-alanine ligase [Rhodanobacter fulvus Jip2]
gi|388435023|gb|EIL91944.1| UDP-N-acetylmuramate--L-alanine ligase [Rhodanobacter fulvus Jip2]
Length = 479
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 158/446 (35%), Positives = 221/446 (49%), Gaps = 49/446 (10%)
Query: 56 LTNCTFKRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEG 115
+T NE+ + F+ +HF+GIGG G+S +A++ G+ VSGSD S
Sbjct: 1 MTPRRLSANEDLMSTFRR----VHFIGIGGVGMSGIAEVLHNLGYAVSGSDRNPSPTALR 56
Query: 116 LLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLA 175
L G +HIGH+ SN+ D VV SSAIPQDN E+L A+ +P+ R L
Sbjct: 57 LQGMGITVHIGHAASNLGDAD------VVVTSSAIPQDNPELLAAREARIPLVPRAEMLG 110
Query: 176 KLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFV 235
+L +A++G+HGK+TT S+ A VL G D T ++G + + G G+ V
Sbjct: 111 ELMRFRRGVAIAGTHGKTTTTSLTASVLAEAGYDPTFVIGGQL-NAAGANARLGTGQYLV 169
Query: 236 LEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDA-VKSIFRRFLKQIRVGGHLVICGD 294
EADE DG FL LSP +A VTN+D +H++ + + A VK F FL ++ G V+C D
Sbjct: 170 AEADESDGSFLLLSPIIAAVTNIDADHLENYGGDFALVKKAFADFLHRLPFYGLAVLCVD 229
Query: 295 SQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNV 354
R L + + +++TYG S + S
Sbjct: 230 DAEVRELAGRTTR-------------------------RVMTYGIESQDADVRASALRQS 264
Query: 355 QGGSDYILCERGRPLA-QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPL 413
+ L GR A + L +PG HNVLN+LA A L + E+IA L
Sbjct: 265 GFEMHFNLHLPGRDEALPVMLNLPGRHNVLNALAAAAIGWQLGVEA----EAIAH---AL 317
Query: 414 SKFMGVSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHT 469
SKF GV RRF G I + DD+ HHP+E+ AV A R +P + L+ FQPH
Sbjct: 318 SKFQGVGRRFHRRGEIALDQGSVLLVDDYGHHPSELAAVFAAVRGGWPERRLVVGFQPHR 377
Query: 470 YSRLVVLKDDFANALSEADQVVVSAV 495
YSR L DDFAN L+E D +V++ V
Sbjct: 378 YSRTRDLLDDFANVLAEVDVLVLTDV 403
>gi|345890660|ref|ZP_08841525.1| UDP-N-acetylmuramate-L-alanine ligase [Desulfovibrio sp.
6_1_46AFAA]
gi|345049014|gb|EGW52833.1| UDP-N-acetylmuramate-L-alanine ligase [Desulfovibrio sp.
6_1_46AFAA]
Length = 457
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 136/418 (32%), Positives = 216/418 (51%), Gaps = 41/418 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH VGIGG+G+S +A++ L QG+E+SGSDL S+ + L E GA + +GH+ N+
Sbjct: 8 IHMVGIGGAGMSGIAEVLLNQGYEISGSDLSDSAVVRHLRELGARVAVGHAAENVGD--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V S+AI DN E++ + + I R LA+L IA++G+HGK+TT S
Sbjct: 65 ---VQVLVKSTAIGDDNPELVEGRRRNIAIIPRAEMLAELMRLRQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+ A + G D T I+G + + + G G + EADE DG FL L P + VVTN
Sbjct: 122 LTASIFDTAGLDPTVIIGGRLNVYGTNA-HLGHGDYLIAEADESDGSFLCLLPIINVVTN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D +H+D ++ +A+ + F +F+ + G V+CGD R+LL ++K+
Sbjct: 181 VDEDHLDHYKSREAIDAAFVQFMNNVPFYGINVVCGDDPGVRALLPRVKR---------- 230
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
++TYGF++ N A + ++ S + + L ++SL P
Sbjct: 231 ---------------PVLTYGFAADNHLRAVLLESGLR--SRFEVWREDEKLGEVSLPQP 273
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD 437
G HN+LN+LA I + ++ + L F GV RRF+ G G + DD
Sbjct: 274 GRHNILNALAAIGAAM-------EADIAFERCARGLGGFGGVGRRFEFKGEKDGVTVVDD 326
Query: 438 FAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
+ HHP E+ A L ARQ FP + ++A FQPH +SR +F + D+V+++ +
Sbjct: 327 YGHHPAEIAATLATARQVFPGRRIVAAFQPHRFSRTQAHFGEFCKVFDQVDEVLLTEI 384
>gi|114566364|ref|YP_753518.1| UDP-N-acetylmuramate--alanine ligase [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
gi|123322290|sp|Q0AYQ7.1|MURC_SYNWW RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|114337299|gb|ABI68147.1| UDP-N-acetylmuramate--L-alanine ligase [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
Length = 465
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 150/422 (35%), Positives = 221/422 (52%), Gaps = 43/422 (10%)
Query: 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGND 136
WIH VGI G+G+S +A++ +QG++VSGSDL + L E G + GHS SN++
Sbjct: 8 WIHMVGIAGAGMSGIARVLAQQGYKVSGSDLQVNDTTSRLEEIGVEIFKGHSSSNLKEG- 66
Query: 137 GSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
+ +V SSA+PQDN+E+ A+ +PI KR LA L +AV+G+HGK+TT
Sbjct: 67 ----VDLLVTSSAVPQDNIELRLAREKKIPILKRGQMLAHLANAKKAVAVAGAHGKTTTT 122
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SML VL G + + IVG + Q + + G G FV+EADE D FL L P +A++T
Sbjct: 123 SMLYMVLANCGTEPSFIVGGEL-QGSELNAKLGRGDYFVVEADESDASFLDLRPYIALIT 181
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D ++ D ++ FR+F++QIR G ++ G RSL+ + + L + G
Sbjct: 182 NVEDDHLDYYKSVDNIRKAFRQFVEQIRPEGFAMLYGGDAFNRSLVKDLTLNKRLLFYGE 241
Query: 317 VVSNQSSDLWGQGHDYKIITY---GFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQIS 373
+SN DY + + G S D Y + L +
Sbjct: 242 DLSN----------DYYFLNWESIGLGSHFDVYKRELG----------------FLGRFE 275
Query: 374 LQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH 433
L +PG HN LN+LA IA+ L + +K L F G RRF + G
Sbjct: 276 LAVPGKHNALNALAAIASALE-------LGLEMEPIKSALKNFHGARRRFQIQGQKALVT 328
Query: 434 IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVS 493
+ DD+AHHPTE+RA + AAR F + +I V+QPH YSR +L AL AD +++
Sbjct: 329 VVDDYAHHPTEIRATIDAARN-FHSGRVIVVYQPHRYSRTQLLGRQLGEALINADLAIIT 387
Query: 494 AV 495
V
Sbjct: 388 EV 389
>gi|260583459|ref|ZP_05851207.1| UDP-N-acetylmuramate--alanine ligase [Granulicatella elegans ATCC
700633]
gi|260158085|gb|EEW93153.1| UDP-N-acetylmuramate--alanine ligase [Granulicatella elegans ATCC
700633]
Length = 443
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 143/419 (34%), Positives = 222/419 (52%), Gaps = 53/419 (12%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYME-GLLEAGANLHIGHSVSNIQGNDG 137
HF GI GSG+SALA + +G+ V GSDL + + GL +AG + + NIQ
Sbjct: 8 HFTGIKGSGMSALALVLHGEGYSVQGSDLENYFFTQKGLEDAGIKM-FPFNAENIQEG-- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
V+A +A P + E++ A+ G+ + + +L +L + Y +A++GSHGK++T
Sbjct: 65 ----QIVIAGNAFPDSHEELVAAREKGIEMIRYHKFLGELLKGYKSVAITGSHGKTSTTG 120
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+LA+VL AM + + ++G +GS + FVLEA EY F+ P A++TN
Sbjct: 121 LLAHVLSAM-EPTSYLIGDGTGHGVEGSEY------FVLEACEYKRHFMAYKPDYAIMTN 173
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D++H D + D D V+S F F +Q++ G ++ CGD AR L ++ T + Y
Sbjct: 174 IDFDHPDYYTDIDDVQSAFESFGRQVKKG--IIACGDD--AR--LHELDVTTPITY---- 223
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
YG + ND AE++ + +G S + + G+ + +
Sbjct: 224 -------------------YGIAKSNDVVAENIEKDTEG-SHFDVYIYGKFYGKFDIPTF 263
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD 437
G HN+LN+LA+I T + E +A L F GV RRF I + DD
Sbjct: 264 GTHNILNALAII----TFYYLNNFNPEELAS---NLKTFGGVKRRFSE-KKIKEITVIDD 315
Query: 438 FAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAVL 496
+AHHP+E+RA L AARQ++P K ++AVFQPHT++R + L D+FA ALS AD V + +
Sbjct: 316 YAHHPSEIRATLDAARQKYPTKKIVAVFQPHTFTRTIALLDEFAKALSLADDVYLCDIF 374
>gi|126665245|ref|ZP_01736228.1| UDP-N-acetylmuramate--alanine ligase [Marinobacter sp. ELB17]
gi|126630615|gb|EBA01230.1| UDP-N-acetylmuramate--alanine ligase [Marinobacter sp. ELB17]
Length = 486
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 148/426 (34%), Positives = 222/426 (52%), Gaps = 49/426 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ QG+ VSGSDL + + L G ++ IGH N + D
Sbjct: 22 IHFVGIGGAGMSGIAEVLKNQGYNVSGSDLRHGAVTQRLTAMGIDVQIGHRAENTEKAD- 80
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSA+ +N E++ A+S +PI R LA++ + IAV+G+HGK+TT S
Sbjct: 81 -----VVVVSSAVAANNPEVVAARSNRIPIVPRAEMLAEIMRYRHGIAVAGTHGKTTTTS 135
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A V G D T ++G + + GG + + EADE D FL L+P ++VVTN
Sbjct: 136 LIASVFAEAGLDPTFVIGGKLNSAGTNAKL-GGSRYLIAEADESDASFLHLTPLISVVTN 194
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
++ +H+D + D + +K F FL + G V+C D R +L +I +
Sbjct: 195 IEADHMDTYGGDVEKLKQTFVDFLHNLPFYGVAVMCIDDPYVREILPRISR--------- 245
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFN-DWYAESVCPNVQGGSDYILCERGRPLA--QIS 373
IITYG + D+ AE++ + G L +R P A Q+
Sbjct: 246 ----------------TIITYGIDNPEADYRAENIVSD--GLRTRFLVKRPGPRADLQVE 287
Query: 374 LQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY--- 430
L++PG HNVLN+LAVIA D A + L+ F GV RRF + G
Sbjct: 288 LKMPGRHNVLNALAVIAVATDDGVDD-------ASIGRGLAGFAGVGRRFQVYGDYPIAK 340
Query: 431 -GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
+ DD+ HHPTEV AV++AAR +P + ++ ++QPH +SR L +DF LS D
Sbjct: 341 GSITLVDDYGHHPTEVAAVIRAARDAWPGRRVVMLYQPHRFSRTRDLYEDFVKVLSTVDG 400
Query: 490 VVVSAV 495
+++ V
Sbjct: 401 LLLMDV 406
>gi|393722599|ref|ZP_10342526.1| UDP-N-acetylmuramate--L-alanine ligase [Sphingomonas sp. PAMC
26605]
Length = 472
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 154/431 (35%), Positives = 230/431 (53%), Gaps = 52/431 (12%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G+ V GSD+ +EGL G + IGH N+
Sbjct: 9 GTIHFVGIGGIGMSGIAEVMKNLGYAVQGSDVAEGYVVEGLRAKGIKVLIGHHADNL--G 66
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D + +V S+AI + N E+ A +P+ +R LA+L + +AV+G+HGK+TT
Sbjct: 67 DAA----VIVTSTAIKRGNPEVEAALERRIPVVRRAEMLAELMRLKSTVAVAGTHGKTTT 122
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L A G D T I G + + + G V+EADE DG FL L ++AVV
Sbjct: 123 TSMVAALLDAGGVDPTVINGGIINSYGSNARL-GASDWMVVEADESDGSFLRLDGTIAVV 181
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D + DAVK F F++ + G ++C D ++++ +++
Sbjct: 182 TNIDPEHLDHYGSFDAVKDAFVEFVENVPFYGAALLCLDHPEVQNIIPRVR--------- 232
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER-----GRPLA 370
D +++TYGFS+ +D +V P + GG+ + + R R +
Sbjct: 233 ---------------DRRVVTYGFSAQSDVRGVNVTP-IPGGNRFEVIVRHRDGTTRSIE 276
Query: 371 QISLQIPGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
I + +PG HNV N+LA I L L I D A ++ +KF GV RRF +G +
Sbjct: 277 GIEMPMPGRHNVQNALAAIGVALELGIED--------ATIQQGFAKFGGVKRRFTKVGEV 328
Query: 430 -YG----CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANAL 484
G I DD+ HHP E+RAVL AAR+ N+ +IAV QPH +SRL L ++F A
Sbjct: 329 GVGETGVVTIIDDYGHHPVEIRAVLSAAREGVENR-VIAVVQPHRFSRLGDLMEEFQGAF 387
Query: 485 SEADQVVVSAV 495
++AD V V+ V
Sbjct: 388 NDADMVFVAPV 398
>gi|260775365|ref|ZP_05884262.1| UDP-N-acetylmuramate--alanine ligase [Vibrio coralliilyticus ATCC
BAA-450]
gi|260608546|gb|EEX34711.1| UDP-N-acetylmuramate--alanine ligase [Vibrio coralliilyticus ATCC
BAA-450]
Length = 486
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 141/428 (32%), Positives = 215/428 (50%), Gaps = 61/428 (14%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHF+GIGG+G+S +A++ L +G++++GSDL + + L + GA + IGH+ SN+
Sbjct: 21 RVKCIHFIGIGGAGMSGIAEVLLNEGYQITGSDLAENPVTDRLAKKGATIFIGHAESNVH 80
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
+ VV S+AI ++N EI A++ VP+ +R LA+L + IAV+G+HGK+
Sbjct: 81 Q------ASVVVVSTAINEENPEIKAARAARVPVVRRAEMLAELMRFRHGIAVAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEADEYDGCF 245
TT +++ + D P F +G + G N + EADE D F
Sbjct: 135 TTTALVTQIYSEAELD---------PTFVNGGLVKSAGTNARLGSSRILIAEADESDASF 185
Query: 246 LGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 304
L L P V++VTN++ +H+D + D + +K F FL + G ++C D R L+ +
Sbjct: 186 LHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAIVCIDDPVVRELIPR 245
Query: 305 IKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE 364
I + ++ITYGF+ D E+ C Q G + +
Sbjct: 246 ISR-------------------------QVITYGFAEDADVRIENYCQEGQQGK-FTVVR 279
Query: 365 RGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFD 424
+GR I+L IPG HN LN+ A IA + ESI ++ G RRF+
Sbjct: 280 QGRANLDITLNIPGRHNALNAAAAIAVAT----EDDIDDESIL---RAMAGTQGTGRRFE 332
Query: 425 LIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
+G + DD+ HHPTEV + AAR + +K L+ +FQPH YSR L DDF
Sbjct: 333 HLGEFDTGNGSAMLVDDYGHHPTEVDVTIHAARNGWQDKRLVMIFQPHRYSRTRDLYDDF 392
Query: 481 ANALSEAD 488
AN L + D
Sbjct: 393 ANVLEQVD 400
>gi|363893334|ref|ZP_09320471.1| UDP-N-acetylmuramate-alanine ligase [Eubacteriaceae bacterium CM2]
gi|361961432|gb|EHL14633.1| UDP-N-acetylmuramate-alanine ligase [Eubacteriaceae bacterium CM2]
Length = 449
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 137/419 (32%), Positives = 220/419 (52%), Gaps = 40/419 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
I F+GIGG +SALA + G++V GSD S + L ++G ++IGH+ NI +
Sbjct: 3 IFFIGIGGISMSALAVICKNLGYDVYGSDRESSEITKKLEKSGIKIYIGHNKDNITED-- 60
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKSTTA 196
+ VV ++AI +DN E++ + +G+ +R +L L EKY N IA+SG+HGK+TT
Sbjct: 61 ---FDMVVYTAAIAKDNEELVKSYDLGLNTMERANFLGHLMEKYENSIAISGTHGKTTTT 117
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
S+L + TA++G G+I G F+ EA EY FL P +A++T
Sbjct: 118 SILTLIFNKADTSPTALIGGVFANIG-GNIEIGSSDIFITEACEYVDSFLQFFPKIAIIT 176
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F+D +++K F +F Q++ G ++ GD + +S L
Sbjct: 177 NIEADHLDYFKDLESIKKSFLKFSNQVKSNGFVIANGDDENVKSTL-------------- 222
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+ + KI GF ND+ ++V + +G ++ L + + SL++
Sbjct: 223 -----------KNSNSKIYYCGFDETNDFVCKNVKSDDEGYPNFDLFFKNELIDNFSLKV 271
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
G HN+ N++ IA K S + +K L +F GV RRF+ IG G +YD
Sbjct: 272 YGKHNIYNAICSIAAAYLC---KINS----SVIKSALLEFTGVGRRFEYIGEKNGVKVYD 324
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHPTE++A L AA+ N+ LI++FQPHTYSR L DF + D ++ + +
Sbjct: 325 DYAHHPTEIKATLNAAKSIKKNR-LISIFQPHTYSRTKSLFKDFNTCFDDTDIIIFADI 382
>gi|375109685|ref|ZP_09755927.1| UDP-N-acetylmuramate--L-alanine ligase [Alishewanella jeotgali KCTC
22429]
gi|374570207|gb|EHR41348.1| UDP-N-acetylmuramate--L-alanine ligase [Alishewanella jeotgali KCTC
22429]
Length = 484
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 145/427 (33%), Positives = 221/427 (51%), Gaps = 49/427 (11%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
R IHFVGIGG+G+ +A++ L +G++VSGSD+ + E L GA + IGH+ +NI
Sbjct: 13 RRVERIHFVGIGGAGMGGIAEVLLNEGYKVSGSDIAAGAVTERLAGLGAEIFIGHTAANI 72
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
QG + VV SSAI DN E+ A+ + +P+ +R L +L + IA++G+HGK
Sbjct: 73 QG------ASVVVVSSAIKADNPEVSSARELRIPVVRRAEMLGELMRFRHGIAIAGTHGK 126
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+TT S++A V G D T ++G + + G G+ + EADE D FL L P
Sbjct: 127 TTTTSLMASVFAEAGADPTFVIGGLLNSAGSNARL-GAGRYLIAEADESDASFLHLQPMA 185
Query: 253 AVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
V+TN++ +H+D ++ D + +K+ + FL + G V+C D R L+ I +
Sbjct: 186 TVITNIEADHMDTYQGDFEKLKATYMEFLHNLPFYGLAVVCLDDPVLRQLIPCIGR---- 241
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPL 369
++TYGFS D+ + Q G S +++ +
Sbjct: 242 ---------------------TVLTYGFSDDADY---QISDFSQTGTRSQFLITDPAGNQ 277
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
+ISL +PG HN LN+ AV A L D+ + ++I LSKF G+ RRF G
Sbjct: 278 REISLNLPGRHNALNATAVFA----LAQDEGIAEQAILA---ALSKFEGIGRRFQQYGEF 330
Query: 430 YGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
+ DD+ HHPTEV A + A R +P + L+ +QPH Y+R L DDFA LS
Sbjct: 331 ETGRGKVLLLDDYGHHPTEVAATVAAVRSAWPQRRLVMCYQPHRYTRTRDLYDDFARVLS 390
Query: 486 EADQVVV 492
E D +++
Sbjct: 391 EVDTLLL 397
>gi|291518352|emb|CBK73573.1| UDP-N-acetylmuramate--L-alanine ligase [Butyrivibrio fibrisolvens
16/4]
Length = 414
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 135/406 (33%), Positives = 210/406 (51%), Gaps = 40/406 (9%)
Query: 88 LSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVAS 147
+S LA++ L GF +SGSD S + L GA ++ + SNI + + +V +
Sbjct: 1 MSGLAEILLGAGFTISGSDRDCSDLTKHLEALGAKVNYPQAASNITDD-----IDLIVYT 55
Query: 148 SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKSTTASMLAYVLKAM 206
+AI DN E++ AK+ G P+ R L ++ E Y N I V+G+HGK+TT SM++ +L
Sbjct: 56 AAISDDNPELMAAKASGKPMLTRAELLGEIMENYANSITVAGTHGKTTTTSMVSQILLET 115
Query: 207 GDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF 266
+ T VGA + ++ G FV EA EY F P ++ N++ +H+D F
Sbjct: 116 SKEPTITVGAILDAI-HSNVHVGDSDIFVAEACEYTNSFHSFFPKYNIILNVEADHLDFF 174
Query: 267 EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLW 326
++ D V++ FR+F + G L+I + +D + +
Sbjct: 175 KNLDNVRASFRKFAENTSDDGALIINNE-------IDNVS------------------YF 209
Query: 327 GQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSL 386
+G K+ITY D + N +G + ++ +G+ L +I+L +PG HN+ N+L
Sbjct: 210 TEGLKCKVITYALHGDADIVPTEISYNEKGFASFVPVYKGQALERITLNVPGDHNISNAL 269
Query: 387 AVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVR 446
+ I L + D +C+K LSKF G RRF+L G G + DD+AHHPTE+R
Sbjct: 270 SAIVLCLEMGVD-------YSCIKTGLSKFGGAHRRFELKGIYKGATVIDDYAHHPTEIR 322
Query: 447 AVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
A L AA +P+ +I FQ HTY+R + L DDFA ALS AD V++
Sbjct: 323 ASLAAA-ANYPHNRIIVCFQSHTYTRTLSLLDDFAEALSAADIVIL 367
>gi|194335050|ref|YP_002016910.1| UDP-N-acetylmuramate--L-alanine ligase [Prosthecochloris aestuarii
DSM 271]
gi|226711871|sp|B4S6Q8.1|MURC_PROA2 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|194312868|gb|ACF47263.1| UDP-N-acetylmuramate/alanine ligase [Prosthecochloris aestuarii DSM
271]
Length = 464
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 150/421 (35%), Positives = 222/421 (52%), Gaps = 44/421 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H VGIGG+G+SA+A+L LK GF V+GSDL + L E GA ++ GHS N+ D
Sbjct: 9 VHIVGIGGAGMSAIAELLLKSGFTVTGSDLSSGEVTDKLSELGAEVYKGHSEGNVGACD- 67
Query: 138 SRFPNAVVASSAI-PQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
VV SSA+ P+ NVEIL A+ G+P+ KRD L +L + + V+G+HGK+TT
Sbjct: 68 -----VVVYSSAVRPESNVEILAAEKKGIPVIKRDEMLGELMRFRSGVCVAGTHGKTTTT 122
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
+M+A +L G+ T ++G + + GS G GK V+EADEYD FL L+PS+AV+
Sbjct: 123 AMIATMLIEAGESPTVMIGG-ISDYLKGSTVVGNGKYMVIEADEYDRAFLKLTPSIAVIN 181
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+L+ EH D + D ++ F F + G ++ C D R ++
Sbjct: 182 SLEAEHADTYATLDELRDAFIDFANSVPFYGKVICCVDWPEVRRIV-------------- 227
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP-LAQISLQ 375
G + + TYG D A + ++ + + R LA +
Sbjct: 228 -----------SGFNRRYSTYGIDETADLMARDI--RIEKNETFFSVDYMRSHLADFRIA 274
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY-GCHI 434
+PG HNV N+LA IA L + + L L+ F G+ RRF + T G I
Sbjct: 275 VPGRHNVHNALAAIAVGLEM-------GLPVERLVSGLAAFSGMRRRFQIRYTSPDGPII 327
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSA 494
DD+AHHP+EV+A ++AA+ +P + +IAVFQPH YSR +F ALS AD+V ++
Sbjct: 328 VDDYAHHPSEVKAAVKAAKAGWPEREVIAVFQPHLYSRTADFAGEFGWALSGADRVCIAG 387
Query: 495 V 495
+
Sbjct: 388 I 388
>gi|427722137|ref|YP_007069414.1| UDP-N-acetylmuramate--L-alanine ligase [Leptolyngbya sp. PCC 7376]
gi|427353857|gb|AFY36580.1| UDP-N-acetylmuramate--L-alanine ligase [Leptolyngbya sp. PCC 7376]
Length = 467
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 144/424 (33%), Positives = 215/424 (50%), Gaps = 47/424 (11%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI-----Q 133
HF+GIGG G+SALA + ++ VSGSD S E L AGAN+ N+ +
Sbjct: 12 HFIGIGGIGMSALAYVLAQRNLPVSGSDRRSSHITERLAGAGANIFSQQVKENLHPVEPE 71
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
N ++ P V+ S+AI ++N E A+S+G I+ R LA L +Y+ +AV G+HGK+
Sbjct: 72 ANTATKLPQ-VICSTAIGKENPEFQAAQSLGCDIFHRSDVLAALVNEYDSVAVGGTHGKT 130
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT+S++ Y+L G D T IVG V + +G+ G V EADE DG + L+P +
Sbjct: 131 TTSSLIGYILLKAGLDPTIIVGGEVDAW-NGNARLGDSGYLVAEADESDGTLVKLNPKIG 189
Query: 254 VVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD-SQCARSLLDQIKQDTGLK 312
+VTN++ +H D ++ D V FR F ++ +V LV C D A LD
Sbjct: 190 IVTNIELDHPDHYQSIDDVIETFRTFAERCKV---LVACLDCPTIASGSLD-------FD 239
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQI 372
S + ++ ++D W DY + + + ERG L +I
Sbjct: 240 ISYAIDNHTNADYWATDIDYGAM---------------------ATTATIWERGDRLGEI 278
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC 432
SL + G HN+ N+LA IA R A + L+ F G RRF++ G G
Sbjct: 279 SLTLLGKHNLNNALAAIAVA-------RYFDVPFAPIAEALATFGGAKRRFEVKGKRQGI 331
Query: 433 HIYDDFAHHPTEVRAVLQAARQRF-PNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
DD+AHHP+E+ L AAR R ++ ++A+FQPH YSR D+FA + +AD V
Sbjct: 332 TFIDDYAHHPSEISVTLAAARIRSGKDRRVVAIFQPHRYSRTASFLDEFAVSFKDADITV 391
Query: 492 VSAV 495
++ +
Sbjct: 392 ITDI 395
>gi|259503623|ref|ZP_05746525.1| UDP-N-acetylmuramate-alanine ligase [Lactobacillus antri DSM 16041]
gi|259168397|gb|EEW52892.1| UDP-N-acetylmuramate-alanine ligase [Lactobacillus antri DSM 16041]
Length = 435
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 144/432 (33%), Positives = 224/432 (51%), Gaps = 69/432 (15%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEG-LLEAG--------ANLH 124
K +F+GI G+G++ALA++ QG EV GSD+ ++ +G LL+AG ANL
Sbjct: 2 EKKTYYFIGIKGTGMAALARVLHDQGNEVLGSDIAKETFTQGPLLKAGIQILPFDPANLK 61
Query: 125 IGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLI 184
G +V I+GN A +D+ E+L AK +G+P+ + K + I
Sbjct: 62 PGMTV--IKGN-------------AFSEDHPEVLRAKEIGLPVLTYPEAVEKEVVGHTSI 106
Query: 185 AVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGC 244
++G+HGK++T ++LA+VL A+ + + ++G V + D F FV EADEY
Sbjct: 107 GIAGAHGKTSTTALLAHVLAAV-EPTSYLIGDGVGKGNDDDRF------FVFEADEYRDH 159
Query: 245 FLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 304
FL P A++TN+D++H D F+D D V+ F + +Q++ + GD R L
Sbjct: 160 FLDYHPDYAIMTNIDFDHPDYFKDIDDVRGSFETYGRQVKKA--IFAWGDDANLRKL--- 214
Query: 305 IKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE 364
D+ D + YG + +D+ AE++ GS Y
Sbjct: 215 -------------------DV-----DVPVYYYGTGAGDDFRAENIR-RTPAGSTYDAYF 249
Query: 365 RGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFD 424
R + L ++ + G H++LNSLAV+A D + ++ L+ F GV RRF
Sbjct: 250 RDQKLGTFTIHLYGEHSILNSLAVLAVAYMEKVD-------MDKIRQELANFSGVKRRFS 302
Query: 425 LIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANAL 484
I + DD+AHHP E++A + AARQ+FP+K ++AVFQPHTYSRL D FA +L
Sbjct: 303 ET-DIADDKLIDDYAHHPNEIKATIDAARQKFPDKEIVAVFQPHTYSRLAAYIDGFAASL 361
Query: 485 SEADQVVVSAVL 496
S+AD+V V+ +
Sbjct: 362 SKADKVFVTPIF 373
>gi|399543816|ref|YP_006557124.1| UDP-N-acetylmuramate--L-alanine ligase [Marinobacter sp. BSs20148]
gi|399159148|gb|AFP29711.1| UDP-N-acetylmuramate--L-alanine ligase [Marinobacter sp. BSs20148]
Length = 486
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 149/426 (34%), Positives = 222/426 (52%), Gaps = 49/426 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ QG+ VSGSDL + + L G ++ IGH N + D
Sbjct: 22 IHFVGIGGAGMSGIAEVLKNQGYNVSGSDLRHGAVTQRLTAMGIDVQIGHRAENTEKAD- 80
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSA+ +N E++ A+S +PI R LA++ + IAV+G+HGK+TT S
Sbjct: 81 -----VVVVSSAVAANNPEVVAARSNRIPIVPRAEMLAEIMRYRHGIAVAGTHGKTTTTS 135
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A V G D T ++G + + GG + + EADE D FL L+P ++VVTN
Sbjct: 136 LIASVFAEAGLDPTFVIGGKLNSAGTNAKL-GGSRYLIAEADESDASFLHLTPLISVVTN 194
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
++ +H+D + D + +K F FL + G V+C D R +L +I +
Sbjct: 195 IEADHMDTYGGDVEKLKQTFVDFLHNLPFYGVAVMCIDDPYVREILPRISR--------- 245
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFN-DWYAESVCPNVQGGSDYILCERGRPLA--QIS 373
IITYG + D+ AE++ + G L +R P A Q+
Sbjct: 246 ----------------TIITYGIDNPEADYRAENIVSD--GLRMRFLVKRPGPRADLQVE 287
Query: 374 LQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY--- 430
L++PG HNVLN+LAVIA D A + L+ F GV RRF + G
Sbjct: 288 LKMPGRHNVLNALAVIAVATDDGVDD-------ASIGRGLAGFAGVGRRFQVYGDYPIAK 340
Query: 431 -GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
+ DD+ HHPTEV AV++AAR +P + +I ++QPH +SR L +DF LS D
Sbjct: 341 GSITLVDDYGHHPTEVAAVIRAARDAWPGRRVIMLYQPHRFSRTRDLYEDFVKVLSTVDG 400
Query: 490 VVVSAV 495
+++ V
Sbjct: 401 LLLMDV 406
>gi|421907401|ref|ZP_16337278.1| UDP-N-acetylmuramate-alanine ligase [Neisseria meningitidis
alpha704]
gi|393291476|emb|CCI73269.1| UDP-N-acetylmuramate-alanine ligase [Neisseria meningitidis
alpha704]
Length = 469
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 142/435 (32%), Positives = 219/435 (50%), Gaps = 50/435 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
KNR IHFVGIGG G+S +A++ GF+VSGSD ++ E L G +++GH+
Sbjct: 2 MKNRVTNIHFVGIGGVGMSGIAEVLHNLGFKVSGSDQARNAATEHLSSLGIQVYLGHTAE 61
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
++ G D VV S+A+ ++N E++ A +P+ R LA+L + IA++G+H
Sbjct: 62 HVNGAD------VVVTSTAVKKENPEVVAALEQQIPVIPRALMLAELMRFRDGIAIAGTH 115
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S+ A +L A G D T ++G + + G G+ V EADE D FL L+P
Sbjct: 116 GKTTTTSLTASILGAAGLDPTFVIGGKL-NAAGTNARLGKGEYIVAEADESDASFLHLTP 174
Query: 251 SVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
++VVTN+D +H+D + + + F F+ ++ G +C DS+ R++L ++ +
Sbjct: 175 IMSVVTNIDEDHMDTYGHSVEKLHQAFIDFIHRMPFYGKAFLCIDSEHVRAILPKVSK-- 232
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPL 369
Y+ TYG D YA + NV + + + +
Sbjct: 233 --PYA---------------------TYGLDDTADIYATDI-ENVGAQMKFTVHVQMKGH 268
Query: 370 AQ----ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
Q + L +PG HNVLN+LA I L + S+ ++ L F GV RRF
Sbjct: 269 EQGSFEVVLNMPGRHNVLNALAAIGVAL-------EVGASVEAIQKGLLGFEGVGRRFQK 321
Query: 426 IGTIY-----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
G I + DD+ HHP E+ A L AAR +P K L+ FQPH Y+R L +DF
Sbjct: 322 YGDIKLPNGGTALLVDDYGHHPVEMAATLSAARGAYPEKRLVLAFQPHRYTRTRDLFEDF 381
Query: 481 ANALSEADQVVVSAV 495
L+ D +V++ V
Sbjct: 382 TKVLNTVDALVLTEV 396
>gi|406904510|gb|EKD46267.1| hypothetical protein ACD_68C00065G0003 [uncultured bacterium]
Length = 464
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 144/425 (33%), Positives = 218/425 (51%), Gaps = 43/425 (10%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH-SVSN 131
++K ++FVGIGG G+SALA++ L QG++VSG D S + L+ G + I + +N
Sbjct: 5 SKKKNVYFVGIGGVGVSALARIYLAQGYKVSGEDAAKSIVTDDLISLGVAVEISRGNPAN 64
Query: 132 IQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHG 191
++G D V+ S A+P+ + + AK + L LT+ I V GSHG
Sbjct: 65 LKGVD------LVIYSQALPKSHPVLEAAKKRKIKTLTYPQALGLLTKTKPTICVCGSHG 118
Query: 192 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPS 251
K+TT S++ L G D T +VG+ + Q G+ G GK V+EADEY FL L P
Sbjct: 119 KTTTTSLIGLSLLDAGCDPTIVVGSFLEQIM-GNAKLGEGKYMVVEADEYRQAFLNLHPQ 177
Query: 252 VAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
+AV+TN+++EH D + + AVK F +F+K++ G ++ Q + ++ +
Sbjct: 178 IAVITNIEYEHPDCYRNLAAVKEAFAKFIKRLPADGIIIANYHDQNIKQVIKSFHGN--- 234
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSD-YILCERGRPLA 370
IITYGFS D++ V ++Q G + + +G+ L
Sbjct: 235 ----------------------IITYGFSKEADFWG--VNYHLQSGHPVFEIINKGKSLG 270
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
Q+ L +PG HN LN+LA A + RQ + ++ + G RRF+ T
Sbjct: 271 QVKLAVPGKHNALNALAAGAVM-------RQVGINFNSFSQTMANYKGAWRRFEKKATCD 323
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
G YDD+AHHPTE++A L AAR FP + +IA+FQPH SR L D+F AD++
Sbjct: 324 GAVFYDDYAHHPTEIKATLSAARDLFPKRKIIAIFQPHHQSRFHALYDEFLKCFENADEI 383
Query: 491 VVSAV 495
V V
Sbjct: 384 FVMDV 388
>gi|427734341|ref|YP_007053885.1| UDP-N-acetylmuramate--L-alanine ligase [Rivularia sp. PCC 7116]
gi|427369382|gb|AFY53338.1| UDP-N-acetylmuramate--L-alanine ligase [Rivularia sp. PCC 7116]
Length = 479
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 147/440 (33%), Positives = 215/440 (48%), Gaps = 55/440 (12%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
VDF R HF+G+GG G+SALA + ++GF VSGSD+ + L G N
Sbjct: 5 VDFNGRP--FHFIGVGGIGMSALAYILAQKGFRVSGSDVRPNHITHKLESIGVNFFGKQE 62
Query: 129 VSNIQ------------GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAK 176
+N++ G + P VV S+AI N E A G PI+ R LA
Sbjct: 63 AANLKFFDRDLQQEQLRGVSEASTPQ-VVCSTAINASNAEYKAALENGCPIFHRSDILAA 121
Query: 177 LTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL 236
L +YN IAV+G+HGK+TT+SM+ Y+L G D T IVG V + +G+ G V
Sbjct: 122 LISQYNSIAVAGTHGKTTTSSMIGYMLLKAGVDPTIIVGGEVKAW-EGNARLGQSPYLVA 180
Query: 237 EADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQ 296
EADE DG + SP + ++TN++ +H D ++ D V IF+RF Q + LV C D +
Sbjct: 181 EADESDGSLIKHSPEIGIITNIELDHPDHYDTLDEVVDIFQRFTSQCKT---LVACIDCE 237
Query: 297 CARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG 356
R + + YS + S +D + DY+
Sbjct: 238 TVRE-----RFQPHISYS--LNSESGADYYATNIDYR---------------------AD 269
Query: 357 GSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKF 416
G+ ++ E+G L ++L + G HN+ N+LA +A R + L+ F
Sbjct: 270 GTTSLVWEKGIALGVLNLSVLGHHNLSNALAAVAV-------GRALGLEFGEIARGLATF 322
Query: 417 MGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAAR-QRFPNKALIAVFQPHTYSRLVV 475
G RRF+ G + G DD+AHHP+E+ A L AAR Q P + ++A+FQPH YSR
Sbjct: 323 EGARRRFEFRGEVDGITFIDDYAHHPSELSATLAAARLQARPGQRVVAIFQPHRYSRTQA 382
Query: 476 LKDDFANALSEADQVVVSAV 495
+FA + S AD VV++ +
Sbjct: 383 FLAEFATSFSHADLVVLTDI 402
>gi|421562628|ref|ZP_16008454.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis
NM2795]
gi|402342772|gb|EJU77930.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis
NM2795]
Length = 468
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 142/435 (32%), Positives = 219/435 (50%), Gaps = 50/435 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
KNR IHFVGIGG G+S +A++ GF+VSGSD ++ E L G +++GH+
Sbjct: 1 MKNRVTNIHFVGIGGVGMSGIAEVLHNLGFKVSGSDQARNAATEHLSSLGIQVYLGHTAE 60
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
++ G D VV S+A+ ++N E++ A +P+ R LA+L + IA++G+H
Sbjct: 61 HVNGAD------VVVTSTAVKKENPEVVAALEQQIPVIPRALMLAELMRFRDGIAIAGTH 114
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S+ A +L A G D T ++G + + G G+ V EADE D FL L+P
Sbjct: 115 GKTTTTSLTASILGAAGLDPTFVIGGKL-NAAGTNARLGKGEYIVAEADESDASFLHLTP 173
Query: 251 SVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
++VVTN+D +H+D + + + F F+ ++ G +C DS+ R++L ++ +
Sbjct: 174 IMSVVTNIDEDHMDTYGHSVEKLHQAFIDFIHRMPFYGKAFLCIDSEHVRAILPKVSK-- 231
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPL 369
Y+ TYG D YA + NV + + + +
Sbjct: 232 --PYA---------------------TYGLDDTADIYATDI-ENVGAQMKFTVHVQMKGH 267
Query: 370 AQ----ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
Q + L +PG HNVLN+LA I L + S+ ++ L F GV RRF
Sbjct: 268 EQGSFEVVLNMPGRHNVLNALAAIGVAL-------EVGASVEAIQKGLLGFEGVGRRFQK 320
Query: 426 IGTIY-----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
G I + DD+ HHP E+ A L AAR +P K L+ FQPH Y+R L +DF
Sbjct: 321 YGDIKLPNGGTALLVDDYGHHPVEMAATLSAARGAYPEKRLVLAFQPHRYTRTRDLFEDF 380
Query: 481 ANALSEADQVVVSAV 495
L+ D +V++ V
Sbjct: 381 TKVLNTVDALVLTEV 395
>gi|307244053|ref|ZP_07526172.1| UDP-N-acetylmuramate--L-alanine ligase [Peptostreptococcus stomatis
DSM 17678]
gi|306492577|gb|EFM64611.1| UDP-N-acetylmuramate--L-alanine ligase [Peptostreptococcus stomatis
DSM 17678]
Length = 453
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 130/419 (31%), Positives = 219/419 (52%), Gaps = 40/419 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG +SALA++ L +G+ VSGSD S ++ L GA +++G NI +
Sbjct: 3 IHFIGIGGINMSALAEICLNKGYRVSGSDAQDSYLLDHLRSLGATIYVGQKKENISND-- 60
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKSTTA 196
N VV ++AI DN E++ AK+ + + R +L ++ +Y N IAV+G+HGK++T
Sbjct: 61 ---INMVVYTAAISDDNEELVEAKNKNILLINRAAFLGQIMREYRNSIAVAGTHGKTSTT 117
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
S+L+ + D T +VG ++ G++ G K+F+ EA EY FL +P + +V
Sbjct: 118 SILSTIFDYAQTDPTVLVGGNLSTIG-GNVRIGNSKHFITEACEYVDSFLSFNPLIGIVL 176
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F D +K+ F +F K + G+ +I GD++ + ++ ++ +
Sbjct: 177 NIEEDHLDYFSGLDEIKASFNKFGKLLPQSGYFIINGDNENTKDIVYDVRAN-------- 228
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
II +G + ND + + G + + L +G L L +
Sbjct: 229 -----------------IIRFGQNPDNDAIISDIRYDENGYAIFNLKYKGVNLGGFHLSV 271
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
G+HN+ N+ A I + S + ++ + ++ GV RRF+ G + D
Sbjct: 272 YGLHNIYNATAAILAAIV-------SDIDVDTIRKSVLEYHGVGRRFEKKGYYNDALVID 324
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHPTE++A L AA+ +K L FQPHTYSR L +F+ A AD+V+V+ +
Sbjct: 325 DYAHHPTEIKATLAAAKN-LRDKKLWVAFQPHTYSRTKSLFKEFSEAFYSADKVIVTDI 382
>gi|378697363|ref|YP_005179321.1| UDP-N-acetylmuramate:L-alanine ligase [Haemophilus influenzae
10810]
gi|301169879|emb|CBW29483.1| UDP-N-acetylmuramate:L-alanine ligase [Haemophilus influenzae
10810]
Length = 475
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 144/465 (30%), Positives = 235/465 (50%), Gaps = 68/465 (14%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+ R IHF+GIGG+G+S +A++ L +G+++SGSD+ + L +AGA ++IGH
Sbjct: 11 IIPEMRRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGH 70
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
+ +I+G + VV SSAI DN E++ +K +P+ +R LA++ + IAV+
Sbjct: 71 AEEHIEG------ASVVVVSSAIKDDNPELVASKQKRIPVIQRAQMLAEIMRFRHGIAVA 124
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEAD 239
G+HGK+TT +M++ + D P F +G + GKN + EAD
Sbjct: 125 GTHGKTTTTAMISMIYTQAKLD---------PTFVNGGLVKSAGKNAHLGASRYLIAEAD 175
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCA 298
E D FL L P V+VVTN++ +H+D +E D + +K+ + +FL + G V+C D
Sbjct: 176 ESDASFLHLQPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLPFYGLAVMCADDPVL 235
Query: 299 RSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS 358
L+ ++ + ++ITYGFS D+ E G
Sbjct: 236 MELVPKVGR-------------------------QVITYGFSEQADYRIEDYEQTGFQGH 270
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
++C + + L +PG HN LN+ A +A K + + A L+ L+ F G
Sbjct: 271 YTVICPNNERI-NVLLNVPGKHNALNATAALAVA------KEEGIANEAILE-ALADFQG 322
Query: 419 VSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
RRFD +G + DD+ HHPTEV ++AAR+ + +K ++ +FQPH YSR
Sbjct: 323 AGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVDVTIKAAREGWGDKRIVMIFQPHRYSRTR 382
Query: 475 VLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
L DDF LS+ D +++ L ++A ++ A + +C
Sbjct: 383 DLFDDFVQVLSQVDALIM-------LDVYAAGEAPIVGADSKSLC 420
>gi|168209731|ref|ZP_02635356.1| UDP-N-acetylmuramate--alanine ligase [Clostridium perfringens B
str. ATCC 3626]
gi|170712111|gb|EDT24293.1| UDP-N-acetylmuramate--alanine ligase [Clostridium perfringens B
str. ATCC 3626]
Length = 457
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 136/426 (31%), Positives = 222/426 (52%), Gaps = 48/426 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K+ +HF+GIGG +S LA + L G++VSGSD S L E GA ++IGHS
Sbjct: 6 LKDINKKVHFIGIGGVSMSGLAAVLLNAGYKVSGSDSKESEITNRLKEEGAKIYIGHSKD 65
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAVSG 188
N+Q D VV ++AIP DN EI+ AK + + R +L ++ + K+N +AV+G
Sbjct: 66 NLQDVD------VVVYTAAIPSDNPEIIKAKEDNLILMDRAEFLGQIMKGHKFN-VAVAG 118
Query: 189 SHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGL 248
+HGK+TT SM+++V + D T +VG + G+ G + F+ EA EY FL
Sbjct: 119 THGKTTTTSMISHVALSADLDPTILVGGDL-DIIHGNFRVGNSEYFITEACEYKQSFLRF 177
Query: 249 SPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQD 308
P V ++ N+D +H+D ++D + +K F++F++ I G+++ D + +L+ K +
Sbjct: 178 FPYVGIILNIDADHLDFYKDINHIKDTFKQFVRLIPNDGYIIGNADDEKVMEVLEVAKCN 237
Query: 309 TGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP 368
++TY ++ D A ++ N +G + + +
Sbjct: 238 -------------------------VLTYEINN-GDIQARNIEFNEKGCATFDVFRNEEK 271
Query: 369 LAQISLQIPGVHNVLNSLAVI--ATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
L +SL +PG+HNV NSL+ + A + + D S LS F G +RF+
Sbjct: 272 LLSLSLNVPGMHNVSNSLSAVCLAEIFNINADAIVS---------GLSSFGGAHKRFEYK 322
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
GT + DD+AHHP E++A L A++ NK ++ VFQPHTY+R L +DF +
Sbjct: 323 GTKNDITVIDDYAHHPVEIKATLSTAKKMNHNK-IVCVFQPHTYTRTKTLFNDFVKCFDD 381
Query: 487 ADQVVV 492
D++V+
Sbjct: 382 CDELVL 387
>gi|427408249|ref|ZP_18898451.1| UDP-N-acetylmuramate-L-alanine ligase [Sphingobium yanoikuyae ATCC
51230]
gi|425713588|gb|EKU76601.1| UDP-N-acetylmuramate-L-alanine ligase [Sphingobium yanoikuyae ATCC
51230]
Length = 475
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 145/406 (35%), Positives = 213/406 (52%), Gaps = 49/406 (12%)
Query: 99 GFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEIL 158
G++V GSD+ +EGL G + IGH N+ D + VV S+AI + N E+
Sbjct: 32 GYKVQGSDVAEGYVVEGLRAKGIKVMIGHKAENL--GDAA----VVVTSTAIKRGNPEVE 85
Query: 159 HAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHV 218
A VP+ +R LA+L + +A++G+HGK+TT SM+A +L A G D T I G +
Sbjct: 86 LALENRVPVIRRAEMLAELMRLKSTVAIAGTHGKTTTTSMVAALLDAGGVDPTVINGGII 145
Query: 219 PQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRR 278
+ + G V+EADE DG FL L ++AVVTN+D EH+D + DAVK F
Sbjct: 146 NSYGSNARL-GNSDWMVVEADESDGSFLRLDGTIAVVTNIDPEHLDHYGSFDAVKDAFVE 204
Query: 279 FLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYG 338
F++ + G ++C D +++L +++ D +I+TYG
Sbjct: 205 FVENVPFYGAAMLCLDHPEVQAILPRVQ------------------------DRRIVTYG 240
Query: 339 FSSFNDWYAESVCPNVQGGS--DYILCERG---RPLAQISLQIPGVHNVLNSLAVIATVL 393
FS+ D E+V P V GG+ D + ER R + I L +PG HNVLN++A I L
Sbjct: 241 FSAQADIRGENVQP-VPGGNRFDVQIRERDGATRRIEGIELPMPGRHNVLNAMAAIGVAL 299
Query: 394 TLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG----CHIYDDFAHHPTEVRAVL 449
+ D A ++ +KF GV RRF +G I + DD+ HHP E++AVL
Sbjct: 300 QMGIDD-------ATIQTGFAKFGGVKRRFTKVGEIPAGAGIATVIDDYGHHPVEIKAVL 352
Query: 450 QAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
AAR+ + +IAV QPH ++RL L DDF A ++AD V + V
Sbjct: 353 AAAREGAKGR-VIAVVQPHRFTRLRDLMDDFQQAFNDADIVYAAPV 397
>gi|16273065|ref|NP_439297.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus influenzae Rd
KW20]
gi|260580223|ref|ZP_05848053.1| UDP-N-acetylmuramate-alanine ligase [Haemophilus influenzae RdAW]
gi|1171071|sp|P45066.1|MURC_HAEIN RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|33356936|pdb|1GQQ|A Chain A, Murc - Crystal Structure Of The Apo-Enzyme From
Haemophilus Influenzae
gi|33356937|pdb|1GQQ|B Chain B, Murc - Crystal Structure Of The Apo-Enzyme From
Haemophilus Influenzae
gi|33356938|pdb|1GQY|A Chain A, Murc- Crystal Structure Of The Enzyme From Haemophilus
Influenzae Complexed With Amppcp
gi|33356939|pdb|1GQY|B Chain B, Murc- Crystal Structure Of The Enzyme From Haemophilus
Influenzae Complexed With Amppcp
gi|1574695|gb|AAC22794.1| UDP-N-acetylmuramate--alanine ligase (murC) [Haemophilus influenzae
Rd KW20]
gi|260093507|gb|EEW77440.1| UDP-N-acetylmuramate-alanine ligase [Haemophilus influenzae RdAW]
Length = 475
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 144/465 (30%), Positives = 235/465 (50%), Gaps = 68/465 (14%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+ R IHF+GIGG+G+S +A++ L +G+++SGSD+ + L +AGA ++IGH
Sbjct: 11 IIPEMRRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGH 70
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
+ +I+G + VV SSAI DN E++ +K +P+ +R LA++ + IAV+
Sbjct: 71 AEEHIEG------ASVVVVSSAIKDDNPELVTSKQKRIPVIQRAQMLAEIMRFRHGIAVA 124
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEAD 239
G+HGK+TT +M++ + D P F +G + GKN + EAD
Sbjct: 125 GTHGKTTTTAMISMIYTQAKLD---------PTFVNGGLVKSAGKNAHLGASRYLIAEAD 175
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCA 298
E D FL L P V+VVTN++ +H+D +E D + +K+ + +FL + G V+C D
Sbjct: 176 ESDASFLHLQPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLPFYGLAVMCADDPVL 235
Query: 299 RSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS 358
L+ ++ + ++ITYGFS D+ E G
Sbjct: 236 MELVPKVGR-------------------------QVITYGFSEQADYRIEDYEQTGFQGH 270
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
++C + + L +PG HN LN+ A +A K + + A L+ L+ F G
Sbjct: 271 YTVICPNNERI-NVLLNVPGKHNALNATAALAVA------KEEGIANEAILE-ALADFQG 322
Query: 419 VSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
RRFD +G + DD+ HHPTEV ++AAR+ + +K ++ +FQPH YSR
Sbjct: 323 AGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVGVTIKAAREGWGDKRIVMIFQPHRYSRTR 382
Query: 475 VLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
L DDF LS+ D +++ L ++A ++ A + +C
Sbjct: 383 DLFDDFVQVLSQVDALIM-------LDVYAAGEAPIVGADSKSLC 420
>gi|299131924|ref|ZP_07025119.1| UDP-N-acetylmuramate/alanine ligase [Afipia sp. 1NLS2]
gi|298592061|gb|EFI52261.1| UDP-N-acetylmuramate/alanine ligase [Afipia sp. 1NLS2]
Length = 468
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 151/426 (35%), Positives = 227/426 (53%), Gaps = 46/426 (10%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G+ V GSD+ ++ + L + G + +GH N+ G
Sbjct: 8 GPIHFVGIGGIGMSGIAEVLCNLGYTVQGSDVAENANVVRLRDKGIKVSVGHKAENVSGA 67
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D +V S+AI +DN E++ A++ +P+ +R LA+L + IA++G+HGK+TT
Sbjct: 68 D------VLVVSTAIKRDNPELMAARAQRIPVVRRAEMLAELMRLKSCIAIAGTHGKTTT 121
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L A D T I G + + + G G V+EADE DG FL L VA+V
Sbjct: 122 TSMVATLLDAGALDPTVINGGIINAYGTNARL-GAGDWMVVEADESDGTFLKLPVDVAIV 180
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D F+ +AV+ FR F++ + G V+C D ++L+ +I+
Sbjct: 181 TNVDPEHLDHFKTFEAVQEAFRHFVEGVPFYGFAVMCIDHAVVQALVGKIE--------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP------L 369
D +IITYG + D + P GGS + + R R +
Sbjct: 232 ---------------DRRIITYGENPQADARLVDLQP-FTGGSKFKVEIRHRKAGAAHVI 275
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
+ + L +PG HN LN+ A IA + S E+I + L+ F GV RRF G
Sbjct: 276 SDLVLPMPGRHNALNATAAIAVAYEV----GMSDEAI---RKALAGFGGVKRRFTRTGEW 328
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
G + DD+ HHP E+ AVL+AAR + +IAV QPH Y+RL L ++F ++AD
Sbjct: 329 NGVTVIDDYGHHPVEIAAVLKAARDSTKGR-VIAVVQPHRYTRLQSLFEEFCTCFNDADT 387
Query: 490 VVVSAV 495
VVV+ V
Sbjct: 388 VVVADV 393
>gi|169343255|ref|ZP_02864266.1| UDP-N-acetylmuramate--alanine ligase [Clostridium perfringens C
str. JGS1495]
gi|169298553|gb|EDS80634.1| UDP-N-acetylmuramate--alanine ligase [Clostridium perfringens C
str. JGS1495]
Length = 457
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 135/426 (31%), Positives = 223/426 (52%), Gaps = 48/426 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K+ +HF+GIGG +S LA + L G++VSGSD S L E GA ++IGHS
Sbjct: 6 LKDINKKVHFIGIGGVSMSGLAAVLLNAGYKVSGSDSKESEITNRLKEEGAKIYIGHSKD 65
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAVSG 188
N+Q D VV ++AIP DN EI+ AK + + R +L ++ + K+N +AV+G
Sbjct: 66 NLQDVD------VVVYTAAIPSDNPEIIKAKEDNLILMDRAEFLGQIMKGHKFN-VAVAG 118
Query: 189 SHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGL 248
+HGK+TT SM+++V + D T +VG + G+ G + F+ EA EY FL
Sbjct: 119 THGKTTTTSMISHVALSADLDPTILVGGDL-DIIHGNFRVGNSEYFITEACEYKQSFLRF 177
Query: 249 SPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQD 308
P V ++ N+D +H+D +++ + +K F++F++ I G+++ D + +L+ K +
Sbjct: 178 FPYVGIILNIDADHLDFYKNINHIKDTFKQFVRLIPNDGYIIGNADDEKVMEVLEVAKCN 237
Query: 309 TGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP 368
++TYG ++ D A ++ N +G + + +
Sbjct: 238 -------------------------VLTYGINN-GDIQARNIEFNEKGCATFDVFRNEEK 271
Query: 369 LAQISLQIPGVHNVLNSLAVI--ATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
L +SL +PG+HNV NSL+ + A + + D S LS F G +RF+
Sbjct: 272 LLSLSLNVPGMHNVSNSLSAVCLAEIFNINADAIVS---------GLSSFGGAHKRFEYK 322
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
GT + DD+AHHP E++A L A++ N+ ++ VFQPHTY+R L +DF +
Sbjct: 323 GTKNDITVIDDYAHHPVEIKATLSTAKKMNHNR-IVCVFQPHTYTRTKTLFNDFVKCFDD 381
Query: 487 ADQVVV 492
D++V+
Sbjct: 382 CDELVL 387
>gi|381199863|ref|ZP_09907009.1| UDP-N-acetylmuramate--L-alanine ligase [Sphingobium yanoikuyae
XLDN2-5]
Length = 475
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 145/406 (35%), Positives = 213/406 (52%), Gaps = 49/406 (12%)
Query: 99 GFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEIL 158
G++V GSD+ +EGL G + IGH N+ D + VV S+AI + N E+
Sbjct: 32 GYKVQGSDVAEGYVVEGLRAKGIKVMIGHKAENL--GDAA----VVVTSTAIKRGNPEVE 85
Query: 159 HAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHV 218
A VP+ +R LA+L + +A++G+HGK+TT SM+A +L A G D T I G +
Sbjct: 86 LALENRVPVIRRAEMLAELMRLKSTVAIAGTHGKTTTTSMVAALLDAGGVDPTVINGGII 145
Query: 219 PQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRR 278
+ + G V+EADE DG FL L ++AVVTN+D EH+D + DAVK F
Sbjct: 146 NSYGSNARL-GNSDWMVVEADESDGSFLRLDGTIAVVTNIDPEHLDHYGSFDAVKDAFVE 204
Query: 279 FLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYG 338
F++ + G ++C D +++L +++ D +I+TYG
Sbjct: 205 FVENVPFYGAAMLCLDHPEVQAILPRVQ------------------------DRRIVTYG 240
Query: 339 FSSFNDWYAESVCPNVQGGS--DYILCERG---RPLAQISLQIPGVHNVLNSLAVIATVL 393
FS+ D E+V P V GG+ D + ER R + I L +PG HNVLN++A I L
Sbjct: 241 FSAQADIRGENVQP-VPGGNRFDVQIRERDGATRRIEGIELPMPGRHNVLNAMAAIGVAL 299
Query: 394 TLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG----CHIYDDFAHHPTEVRAVL 449
+ D A ++ +KF GV RRF +G I + DD+ HHP E++AVL
Sbjct: 300 QMGIDD-------ATIQTGFAKFGGVKRRFTKVGEIPAGAGVATVIDDYGHHPVEIKAVL 352
Query: 450 QAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
AAR+ + +IAV QPH ++RL L DDF A ++AD V + V
Sbjct: 353 AAAREGAKGR-VIAVVQPHRFTRLRDLMDDFQQAFNDADIVYAAPV 397
>gi|402848194|ref|ZP_10896459.1| UDP-N-acetylmuramate--alanine ligase [Rhodovulum sp. PH10]
gi|402501520|gb|EJW13167.1| UDP-N-acetylmuramate--alanine ligase [Rhodovulum sp. PH10]
Length = 470
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 147/427 (34%), Positives = 228/427 (53%), Gaps = 48/427 (11%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G +HFVGIGG G+S +A++ G+ V+GSD+ ++ ++ L G + +GH+ N+ G
Sbjct: 8 GPVHFVGIGGIGMSGIAEVLANLGYTVTGSDVAENANVKRLRGKGIRVAVGHAAENVDGA 67
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D +V SSAI +DN E++ A++ +P+ +R LA+L +AV+G+HGK+TT
Sbjct: 68 D------VIVVSSAIRRDNPELVAARAKRLPVVRRAEMLAELMRLKRCVAVAGTHGKTTT 121
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
S++A +L A D T I G + + + GGG V+EADE DG FL L VA+V
Sbjct: 122 TSLVASLLDAGHFDPTVINGGIINAYGTNARL-GGGDWMVVEADESDGTFLKLPADVAIV 180
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D F+ +AV+ F+ F + + G V+C D ++++ +I+
Sbjct: 181 TNIDPEHLDHFKTYEAVQEAFQTFAENVPFYGFAVMCIDHPVVQTMVGRIE--------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPN-VQGGSDYILCERGRP------ 368
D ++ITYG + D VC + G S + + RP
Sbjct: 232 ---------------DRRVITYGENPQAD--VRLVCRDFADGRSRFDIVFHARPGSAPHE 274
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
++ + + +PG HN LN+ A IA R+ S ++ L+ F GV RRF GT
Sbjct: 275 ISDLVMPMPGRHNALNATAAIAVA-------RELGVSDELIRKALAGFSGVGRRFTRTGT 327
Query: 429 IYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
G + DD+ HHP E+ AVL+AAR+ + +IAV QPH Y+RL L + F ++AD
Sbjct: 328 WNGVTVIDDYGHHPVEIAAVLKAARETAKGR-VIAVMQPHRYTRLESLFEQFCTCFNDAD 386
Query: 489 QVVVSAV 495
VVV+ V
Sbjct: 387 TVVVAPV 393
>gi|403511226|ref|YP_006642864.1| UDP-N-acetylmuramate--alanine ligase [Nocardiopsis alba ATCC
BAA-2165]
gi|402801180|gb|AFR08590.1| UDP-N-acetylmuramate--alanine ligase [Nocardiopsis alba ATCC
BAA-2165]
Length = 483
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 149/433 (34%), Positives = 220/433 (50%), Gaps = 49/433 (11%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
++ G HF+G+GG+G+S +A++ L+ G EVSGSD S + L GA +H+GH+ N+
Sbjct: 13 DKLGRTHFIGLGGAGMSGIARVLLQSGVEVSGSDARDSDTLRDLERMGARVHVGHAAENL 72
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
+V SSAI +DN E+ A+ G+ I R L L IAVSG+HGK
Sbjct: 73 D------TAETLVISSAIREDNPELAEARRRGLRILPRAAALGALLLGREGIAVSGTHGK 126
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+TT SM+ VL+ +G D ++G + G+ G G+ +EADE DG FL LSP +
Sbjct: 127 TTTTSMITVVLQHLGVDPGYVIGGKLVTTGLGA-DAGVGEVIAVEADESDGSFLMLSPKI 185
Query: 253 AVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
AVVTN++ +H+D + D + F F+ RV L++ D AR + +I ++ G
Sbjct: 186 AVVTNVEADHLDNYSGIDEIHENFADFVD--RVERTLIVGIDDPGARRVA-EIARERG-- 240
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQI 372
K++TYG + D V + G P+
Sbjct: 241 -------------------KKVLTYGEAEDADHRITRVRARGFSTEFTLQTADGEPI-DG 280
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC 432
++ +PG HNVLN+ A + L D + E +A F G +RRF+L G G
Sbjct: 281 TVAVPGRHNVLNAAAAVVVADELGHDLEVAVEGVA-------DFAGAARRFELKGEGGGV 333
Query: 433 HIYDDFAHHPTEVRAVLQAAR----------QRFPNKALIAVFQPHTYSRLVVLKDDFAN 482
+YD +AHHPTE+ A L+A R + P ++A+FQPH YSR + ++FAN
Sbjct: 334 GVYDSYAHHPTEIEADLRATRAALESFSQDDEDVPLGRVVALFQPHLYSRTRIFAEEFAN 393
Query: 483 ALSEADQVVVSAV 495
ALS AD+VVV V
Sbjct: 394 ALSLADEVVVMEV 406
>gi|398385227|ref|ZP_10543251.1| UDP-N-acetylmuramate--alanine ligase [Sphingobium sp. AP49]
gi|397720902|gb|EJK81454.1| UDP-N-acetylmuramate--alanine ligase [Sphingobium sp. AP49]
Length = 475
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 145/406 (35%), Positives = 213/406 (52%), Gaps = 49/406 (12%)
Query: 99 GFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEIL 158
G++V GSD+ +EGL G + IGH N+ D + VV S+AI + N E+
Sbjct: 32 GYKVQGSDVAEGYVVEGLRAKGIKVMIGHKAENL--GDAA----VVVTSTAIKRGNPEVE 85
Query: 159 HAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHV 218
A VP+ +R LA+L + +A++G+HGK+TT SM+A +L A G D T I G +
Sbjct: 86 LALENRVPVIRRAEMLAELMRLKSTVAIAGTHGKTTTTSMVAALLDAGGVDPTVINGGII 145
Query: 219 PQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRR 278
+ + G V+EADE DG FL L ++AVVTN+D EH+D + DAVK F
Sbjct: 146 NSYGSNARL-GNSDWMVVEADESDGSFLRLDGTIAVVTNIDPEHLDHYGSFDAVKDAFVE 204
Query: 279 FLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYG 338
F++ + G ++C D +++L +++ D +I+TYG
Sbjct: 205 FVENVPFYGAAMLCLDHPEVQAILPRVQ------------------------DRRIVTYG 240
Query: 339 FSSFNDWYAESVCPNVQGGS--DYILCERG---RPLAQISLQIPGVHNVLNSLAVIATVL 393
FS+ D E+V P V GG+ D + ER R + I L +PG HNVLN++A I L
Sbjct: 241 FSAQADIRGENVQP-VPGGNRFDVQIRERDGATRRIEGIELPMPGRHNVLNAMAAIGVAL 299
Query: 394 TLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG----CHIYDDFAHHPTEVRAVL 449
+ D A ++ +KF GV RRF +G I + DD+ HHP E++AVL
Sbjct: 300 QMGIDD-------ATIQTGFAKFGGVKRRFTKVGEIPAGAGVATVIDDYGHHPVEIKAVL 352
Query: 450 QAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
AAR+ + +IAV QPH ++RL L DDF A ++AD V + V
Sbjct: 353 AAAREGAKGR-VIAVVQPHRFTRLRDLMDDFQQAFNDADIVYAAPV 397
>gi|347532910|ref|YP_004839673.1| UDP-N-acetylmuramate--alanine ligase [Roseburia hominis A2-183]
gi|345503058|gb|AEN97741.1| UDP-N-acetylmuramate--alanine ligase [Roseburia hominis A2-183]
Length = 459
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 142/421 (33%), Positives = 218/421 (51%), Gaps = 44/421 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG +S LA++ ++ F VSGSD S L G ++ G + +NI +
Sbjct: 12 IHFIGIGGISMSGLAEILSEEHFTVSGSDAKESDLTRHLEHLGIKVYYGQTAANITDD-- 69
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKSTTA 196
+ VV ++AI +DN E A+ G+P+ R L ++ + Y N IAV+G+HGK+TT
Sbjct: 70 ---IDLVVYTAAIHEDNPEFACAREKGIPMMPRAELLGQIMDNYRNSIAVAGTHGKTTTT 126
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM++ +L A D T VG + + DG++ G F+ EA EY FL P +++
Sbjct: 127 SMISQILLAAKCDPTITVGG-ILKALDGNLRVGKSDFFLSEACEYTNSFLHFYPKYSIIL 185
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ EH+D F+D ++ F +F R G ++I GD + D + GLK
Sbjct: 186 NIEAEHLDFFKDIQDIRHSFHQFASNTREDGAIIINGD------IPDYTEITAGLK---- 235
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++IT+G S ++ + + + + + + L +++L +
Sbjct: 236 ---------------PQVITFGLSDSCTFHPADITFDEKACASFTAMKGQETLMKVTLHV 280
Query: 377 PGVHNVLNSLAVIATVLT--LIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHI 434
PG+HNV N+LA IA L D + LS F G RRF G + G I
Sbjct: 281 PGMHNVSNALAAIALADDLGLAAD---------AVAKGLSDFGGADRRFQYKGCVDGVTI 331
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSA 494
DD+AHHPTE+RA L AA+ +P+K L+ FQPHTYSR +DFA+ LS AD VV++
Sbjct: 332 IDDYAHHPTEIRATLTAAKN-YPHKRLVLCFQPHTYSRTKAFLEDFADVLSLADVVVLAD 390
Query: 495 V 495
+
Sbjct: 391 I 391
>gi|329124133|ref|ZP_08252680.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus aegyptius ATCC
11116]
gi|327467558|gb|EGF13056.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus aegyptius ATCC
11116]
Length = 475
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 144/465 (30%), Positives = 235/465 (50%), Gaps = 68/465 (14%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+ R IHF+GIGG+G+S +A++ L +G+++SGSD+ + L +AGA ++IGH
Sbjct: 11 IIPEMRRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGH 70
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
+ +I+G + VV SSAI DN E++ +K +P+ +R LA++ + IAV+
Sbjct: 71 AEEHIEG------ASVVVVSSAIKDDNPELVASKQKRIPVIQRAQMLAEIMRFRHGIAVA 124
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEAD 239
G+HGK+TT +M++ + D P F +G + GKN + EAD
Sbjct: 125 GTHGKTTTTAMISMIYTQAKLD---------PTFVNGGLVKSAGKNAHLGASRYLIAEAD 175
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCA 298
E D FL L P V+VVTN++ +H+D +E D + +K+ + +FL + G V+C D
Sbjct: 176 ESDASFLHLQPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLPFYGLAVMCADDPVL 235
Query: 299 RSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS 358
L+ ++ + ++ITYGFS D+ E G
Sbjct: 236 MELIPKVGR-------------------------QVITYGFSEQADYRIEDYEQTGFQGH 270
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
++C + + L +PG HN LN+ A +A K + + A L+ L+ F G
Sbjct: 271 YTVICPDNERI-NVLLNVPGKHNALNATAALAVA------KEEGIANEAILE-ALADFQG 322
Query: 419 VSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
RRFD +G + DD+ HHPTEV ++AAR+ + +K ++ +FQPH YSR
Sbjct: 323 ACRRFDQLGEFIRPNGKVRLVDDYGHHPTEVSVTIKAAREGWGDKRIVMIFQPHRYSRTR 382
Query: 475 VLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
L DDF LS+ D +++ L ++A ++ A + +C
Sbjct: 383 DLFDDFVQVLSQVDALIM-------LDVYAAGEAPIVGADSKSLC 420
>gi|390576324|ref|ZP_10256394.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia terrae BS001]
gi|420255753|ref|ZP_14758629.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia sp. BT03]
gi|389931663|gb|EIM93721.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia terrae BS001]
gi|398044466|gb|EJL37284.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia sp. BT03]
Length = 464
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 150/426 (35%), Positives = 217/426 (50%), Gaps = 50/426 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ + G++VSGSDL ++ E L GA + IGH NI+G
Sbjct: 8 IHFVGIGGAGMSGIAEVLVNLGYQVSGSDLSRNAVTERLAALGARIAIGHDAENIEG--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
NAVV S+A+ DN E+L A+ +PI R LA+L IA++G+HGK+TT S
Sbjct: 65 ---ANAVVVSTAVRSDNPEVLAARHRRIPIVPRAVMLAELMRLKQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL A G D T ++G + + G G V EADE D FL L P + V+TN
Sbjct: 122 LVASVLAAGGLDPTFVIGGRLIS-AGANARLGTGDFIVAEADESDASFLNLFPVIEVITN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D +K F F ++ G V+C D + +L + +
Sbjct: 181 IDADHMDTYGHDFARLKQAFIEFTHRLPFYGIAVLCVDDPNVKEILPFVSK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYI--LCERGRPLAQISL 374
II YGF+ D +V +GG + + E P+ I L
Sbjct: 232 ----------------PIIRYGFAP--DAQVRAVNVEARGGKMHFTAMREDAAPI-DIVL 272
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG--TIYGC 432
+PG+HNV N+LA IA L A ++ L+ F GV RRF G ++ G
Sbjct: 273 NLPGLHNVQNALAAIAIATEL-------EVKDADIQRALADFNGVGRRFQRYGEVSVTGG 325
Query: 433 HIY---DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
Y DD+ HHP E+ A + AAR FP+K L+ FQPH ++R +DF LS D
Sbjct: 326 GAYTLVDDYGHHPVEMAATIAAARGAFPDKRLVLAFQPHRFTRTRDCFEDFVKVLSTVDA 385
Query: 490 VVVSAV 495
+V++ V
Sbjct: 386 LVLTEV 391
>gi|146342497|ref|YP_001207545.1| UDP-N-acetylmuramate--L-alanine ligase [Bradyrhizobium sp. ORS 278]
gi|166222960|sp|A4YZK2.1|MURC_BRASO RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|146195303|emb|CAL79328.1| UDP-N-acetyl-muramate:alanine ligase, L-alanine adding enzyme
[Bradyrhizobium sp. ORS 278]
Length = 467
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 146/411 (35%), Positives = 219/411 (53%), Gaps = 46/411 (11%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G+ V GSD ++ + L E G + +GH N+ G
Sbjct: 8 GPIHFVGIGGIGMSGIAEVLCNLGYTVQGSDASDNANVARLREKGITVSVGHKAENVAGA 67
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D VV S+AI +DN E++ A++ +P+ +R LA+L + +A++G+HGK+TT
Sbjct: 68 D------VVVVSTAIKRDNPELMAARAQRIPVVRRAEMLAELMRLKSCVAIAGTHGKTTT 121
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L A G D T I G + + + GGG+ V+EADE DG FL L VA+V
Sbjct: 122 TSMVAALLDAGGLDPTVINGGIINAYGTNARL-GGGEWMVVEADESDGTFLKLPADVAIV 180
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D F+ +AV+ FR F++ + G V+C D ++L+ +I+
Sbjct: 181 TNVDPEHLDHFKTFEAVQDAFRAFVENVPFYGFAVMCIDHPVVQALVGKIE--------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR------PL 369
D +IITYG + D + P + GGS + + R R +
Sbjct: 232 ---------------DRRIITYGVNPQADVRLVDLTP-MGGGSSFKVVFRDRKSGATHEI 275
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
+ I L +PG HN N+ A IA R+ S ++ + F GV RRF G
Sbjct: 276 SDIVLPMPGRHNASNATAAIAVA-------RELGLSDEAIRKAIGGFGGVKRRFTRTGEW 328
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
G + DD+ HHP E+ AVL+AAR+ N ++AV QPH Y+RL L ++F
Sbjct: 329 NGVTVIDDYGHHPVEIAAVLKAARES-SNGKVVAVVQPHRYTRLQSLFEEF 378
>gi|379022667|ref|YP_005299328.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia canadensis str.
CA410]
gi|376323605|gb|AFB20846.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia canadensis str.
CA410]
Length = 477
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 145/427 (33%), Positives = 216/427 (50%), Gaps = 48/427 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG G+S +A++ G++V GSDLV + + L G + +GH NI
Sbjct: 16 IHFIGIGGVGMSGIAEILHNLGYKVQGSDLVENYNTKRLESYGIKIFLGHVPQNITN--- 72
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ VV SSAI DN EI A +PI +R LA+L +AVSGSHGK+TT S
Sbjct: 73 ---VSYVVISSAINPDNPEIQEALERKIPIIRRAEMLAELMRLKCSVAVSGSHGKTTTTS 129
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVT 256
++A + +A G T I G + + Y G N+++ EADE D F+ + ++A++T
Sbjct: 130 LVACLFEAAGLCPTVINGGIINNRSTNA--YLGSSNYLIAEADESDATFIHIPSTIAIIT 187
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY--- 313
N+D EH+D ++D + S FR F+ + G V C D + R L+D I + + Y
Sbjct: 188 NIDPEHLDYYKDFATLISAFRSFIINLPFYGFAVCCIDHKIVRKLVDDITERKIVTYGID 247
Query: 314 ---SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
+ + N ++D+ D KI PNV G + +
Sbjct: 248 SADAHIIAFNINTDIASSTFDVKI---------------SLPNVLGTT---------IIE 283
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+I++ IPG HN+LNSLA IA + L I +K + F GV RRF +
Sbjct: 284 KITIPIPGRHNILNSLAAIAVGIEL-------DFGIKAIKNGFNNFKGVKRRFTKVAEYN 336
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQ--RFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
I DD+AHHP E++A L A+ N +IA+FQPH YSR+ L DDF ++AD
Sbjct: 337 MASIIDDYAHHPEEIKATLATAKNIANKQNGKVIAIFQPHRYSRMQHLFDDFMLCFADAD 396
Query: 489 QVVVSAV 495
+ ++ +
Sbjct: 397 ILYITDI 403
>gi|404372888|ref|ZP_10978169.1| UDP-N-acetylmuramate-L-alanine ligase [Clostridium sp. 7_2_43FAA]
gi|226914263|gb|EEH99464.1| UDP-N-acetylmuramate-L-alanine ligase [Clostridium sp. 7_2_43FAA]
Length = 457
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 138/422 (32%), Positives = 215/422 (50%), Gaps = 46/422 (10%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
N+K +HF+GIGG +S LA + L +GF+VSGSD S L GA ++IGH N+
Sbjct: 10 NKK--VHFIGIGGISMSGLAAVLLTKGFKVSGSDSKESEITNKLKSEGAEIYIGHDKGNL 67
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAVSGSH 190
+ D VV ++AIP DN EI+ AK + + R +L + + KYN +A+SG+H
Sbjct: 68 KDVD------LVVYTAAIPSDNPEIIEAKDKNIDLMDRAEFLGLIMKGHKYN-VAISGTH 120
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+T SML++V D T +VG + DG+ G + F+ EA EY FL P
Sbjct: 121 GKTTCTSMLSHVTLKADLDPTILVGGELDVI-DGNFKIGNSEYFITEACEYKESFLKFYP 179
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
+ V+ N+D +H+D + D + +K F +F I G+L+ + + +L++ K +T
Sbjct: 180 YIGVILNIDADHLDYYRDLNHIKETFEKFSNIIPSDGYLIGYCEDENVNEILNKAKCNT- 238
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
I+YG + D A ++ + +G + + +C+ L
Sbjct: 239 ------------------------ISYGINK-GDVRATNISFDNKGRASFTVCKDNDELF 273
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
++L G HN+LN+L+ I L + SI L + G +RF+ G
Sbjct: 274 DVTLNTTGKHNILNALSTICVGLIF----NIPYTSII---EGLRECKGAHKRFEYKGEFN 326
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
G I DD+AHHP E++A L A P+K + AVFQPHTY+R L +DF SE D++
Sbjct: 327 GATIIDDYAHHPVEIKATLDTA-TIIPHKNIYAVFQPHTYTRTKTLFEDFTECFSEVDEL 385
Query: 491 VV 492
++
Sbjct: 386 LL 387
>gi|91205778|ref|YP_538133.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia bellii RML369-C]
gi|109892734|sp|Q1RHX0.1|MURC_RICBR RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|91069322|gb|ABE05044.1| UDP-N-acetylmuramate--alanine ligase [Rickettsia bellii RML369-C]
Length = 478
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 143/430 (33%), Positives = 218/430 (50%), Gaps = 54/430 (12%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG G+S +A++ G++V GSDL + + L G + +GH+ NI
Sbjct: 16 IHFIGIGGVGMSGIAEILHNLGYKVQGSDLSENYNTKRLEAYGIKIFVGHTPQNITN--- 72
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ VV SSAI ++N E+ A +PI +R LA+L +AVSGSHGK+TT S
Sbjct: 73 ---VSYVVVSSAINRNNPEVKEALERKIPIIRRAEMLAELMRLKCSVAVSGSHGKTTTTS 129
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVT 256
++A + +A G T I G + + Y G N+++ EADE D F+ + ++A++T
Sbjct: 130 LVACLFEAAGLHPTVINGGIINNRSTNA--YLGSSNYLIAEADESDATFISIPSTIAIIT 187
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N+D EH+D ++D D + + FR F+ + G V C D + R L++ I + + Y G
Sbjct: 188 NIDPEHLDYYKDFDTLINAFRSFITNLPFYGFAVCCIDHKIVRELVNNITERKVITY--G 245
Query: 317 VVS--------NQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP 368
+ S N S+D+ D KI PNV G +
Sbjct: 246 IDSDDAHITAFNISTDITSSTFDVKI---------------SLPNVSGVT---------I 281
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
+ +I++ PG HN+LNSLA I+ + L I +K + F GV RRF +
Sbjct: 282 IEKITIPTPGRHNILNSLAAISVGVEL-------DFGIKAIKNGFNSFKGVKRRFTKVAE 334
Query: 429 IYGCHIYDDFAHHPTEVRAVLQAARQRFPNK---ALIAVFQPHTYSRLVVLKDDFANALS 485
+ DD+AHHP E++A L A+ NK +IA+FQPH YSR+ L DDF
Sbjct: 335 YNQASVIDDYAHHPEEIKATLSTAKN-IANKQHGKVIAIFQPHRYSRMQHLFDDFMRCFD 393
Query: 486 EADQVVVSAV 495
+AD + ++ V
Sbjct: 394 DADLLYITDV 403
>gi|145627891|ref|ZP_01783692.1| D-alanine--D-alanine ligase [Haemophilus influenzae 22.1-21]
gi|145639341|ref|ZP_01794947.1| D-alanine--D-alanine ligase [Haemophilus influenzae PittII]
gi|144979666|gb|EDJ89325.1| D-alanine--D-alanine ligase [Haemophilus influenzae 22.1-21]
gi|145271644|gb|EDK11555.1| D-alanine--D-alanine ligase [Haemophilus influenzae PittII]
gi|309751215|gb|ADO81199.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus influenzae
R2866]
Length = 475
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 144/465 (30%), Positives = 235/465 (50%), Gaps = 68/465 (14%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+ R IHF+GIGG+G+S +A++ L +G+++SGSD+ + L +AGA ++IGH
Sbjct: 11 IIPEMRRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGH 70
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
+ +I+G + VV SSAI DN E++ +K +P+ +R LA++ + IAV+
Sbjct: 71 AEEHIKG------ASVVVVSSAIKDDNPELVASKQKRIPVIQRAQMLAEIMRFRHGIAVA 124
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEAD 239
G+HGK+TT +M++ + D P F +G + GKN + EAD
Sbjct: 125 GTHGKTTTTAMISMIYTQAKLD---------PTFVNGGLVKSAGKNAHLGASRYLIAEAD 175
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCA 298
E D FL L P V+VVTN++ +H+D +E D + +K+ + +FL + G V+C D
Sbjct: 176 ESDASFLHLQPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLPFYGLAVMCADDPVL 235
Query: 299 RSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS 358
L+ ++ + ++ITYGFS D+ E G
Sbjct: 236 MELVPKVGR-------------------------QVITYGFSEQADYRIEDYEQTGFQGH 270
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
++C + + L +PG HN LN+ A +A K + + A L+ L+ F G
Sbjct: 271 YIVICPNNERI-NVLLNVPGKHNALNATAALAIA------KEEGIANEAILE-ALADFQG 322
Query: 419 VSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
RRFD +G + DD+ HHPTEV ++AAR+ + +K ++ +FQPH YSR
Sbjct: 323 AGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVDVTIKAAREGWGDKRIVMIFQPHRYSRTR 382
Query: 475 VLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
L DDF LS+ D +++ L ++A ++ A + +C
Sbjct: 383 DLFDDFVQVLSQVDALIM-------LDVYAAGEAPIVGADSKSLC 420
>gi|379712082|ref|YP_005300421.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia philipii str.
364D]
gi|376328727|gb|AFB25964.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia philipii str.
364D]
Length = 485
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 142/427 (33%), Positives = 215/427 (50%), Gaps = 48/427 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG G+S +A++ G++V GSDLV + + L G + +GH+ NI
Sbjct: 16 IHFIGIGGVGMSGIAEILYNLGYKVQGSDLVENYNTKRLESYGIKIFLGHAEQNITN--- 72
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ VV SSAI N EI A +PI +R LA+L +AVSGSHGK+TT S
Sbjct: 73 ---VSYVVISSAINPKNPEIKEALERKIPIIRRADMLAELMRLKCSVAVSGSHGKTTTTS 129
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVT 256
++A + +A G T I G + + Y G N+++ EADE D F+ + ++A++T
Sbjct: 130 LVACLFEAAGLCPTVINGGIINNKSTNA--YLGSSNYLIAEADESDATFIHIPSTIAIIT 187
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY--- 313
N+D EH+D + D + + FR F+ + G V C D + R L+D+I + + Y
Sbjct: 188 NIDPEHLDYYRDFETLIGAFRSFITNLPFYGFAVCCIDHKIVRKLVDEITERKIVTYGID 247
Query: 314 ---SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
+ + N ++D+ D KI PNV G + +
Sbjct: 248 SEDAHIIAFNINTDIASSTFDVKI---------------SLPNVLGTT---------IIE 283
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+I++ PG HN+LNSLA IA + L I +K + F GV RRF +
Sbjct: 284 KITIPTPGRHNILNSLAAIAVGIEL-------DFGIKAIKNGFNNFKGVKRRFTKVAEYN 336
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQ--RFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
I DD+AHHP E++A L A+ N +IA+FQPH YSR+ L DDF ++AD
Sbjct: 337 NASIIDDYAHHPEEIKATLATAKNIANKQNGKVIAIFQPHRYSRMQYLFDDFMLCFADAD 396
Query: 489 QVVVSAV 495
+ ++ +
Sbjct: 397 ILYITDI 403
>gi|157803465|ref|YP_001492014.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia canadensis str.
McKiel]
gi|166224723|sp|A8EXZ6.1|MURC_RICCK RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|157784728|gb|ABV73229.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia canadensis str.
McKiel]
Length = 477
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 145/427 (33%), Positives = 216/427 (50%), Gaps = 48/427 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG G+S +A++ G++V GSDLV + + L G + +GH NI
Sbjct: 16 IHFIGIGGVGMSGIAEILHNLGYKVQGSDLVENYNTKRLESYGIKIFLGHVPQNITN--- 72
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ VV SSAI DN EI A +PI +R LA+L +AVSGSHGK+TT S
Sbjct: 73 ---VSYVVISSAINPDNPEIQEALERKIPIIRRAEMLAELMRLKCSVAVSGSHGKTTTTS 129
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVT 256
++A + +A G T I G + + Y G N+++ EADE D F+ + ++A++T
Sbjct: 130 LVACLFEAAGLCPTVINGGIINNRSTNA--YLGSSNYLIAEADESDATFIHIPSTIAIIT 187
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY--- 313
N+D EH+D ++D + S FR F+ + G V C D + R L+D I + + Y
Sbjct: 188 NIDPEHLDYYKDFATLISAFRSFIINLPFYGFAVCCIDHKIVRKLVDDITERKIVTYGID 247
Query: 314 ---SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
+ + N ++D+ D KI PNV G + +
Sbjct: 248 SADAHIIAFNINTDIASSTFDVKI---------------SLPNVLGTT---------IIE 283
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+I++ IPG HN+LNSLA IA + L I +K + F GV RRF +
Sbjct: 284 KITIPIPGRHNILNSLAAIAVGIEL-------DFGIKAIKNGFNNFKGVKRRFTKVAEYN 336
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQ--RFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
I DD+AHHP E++A L A+ N +IA+FQPH YSR+ L DDF ++AD
Sbjct: 337 MASIIDDYAHHPEEIKATLATAKNIANKQNGKVIAIFQPHRYSRMQHLFDDFMLCFADAD 396
Query: 489 QVVVSAV 495
+ ++ +
Sbjct: 397 ILYITDI 403
>gi|456353520|dbj|BAM87965.1| UDP-N-acetylmuramate-L-alanine ligase [Agromonas oligotrophica S58]
Length = 467
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 149/414 (35%), Positives = 219/414 (52%), Gaps = 52/414 (12%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G+ V GSD ++ + L E G + +GH N+ G
Sbjct: 8 GPIHFVGIGGIGMSGIAEVLCNLGYTVQGSDASDNANVARLREKGITVSVGHKAENVAGA 67
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D VV S+AI +DN E++ A++ +P+ +R LA+L + +A++G+HGK+TT
Sbjct: 68 D------VVVVSTAIKRDNPELMAARAQRIPVVRRAEMLAELMRLKSCVAIAGTHGKTTT 121
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L A G D T I G + + + G G+ V+EADE DG FL L VA+V
Sbjct: 122 TSMVATLLDAGGLDPTVINGGIINAYGTNARL-GAGEWMVVEADESDGTFLKLPADVAIV 180
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D F+ DAV+ FR F++ + G V+C D ++L+ +I+
Sbjct: 181 TNVDPEHLDHFKTFDAVQEAFRTFVENVPFYGFAVMCIDHPIVQALVGKIE--------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR------PL 369
D +IITYG + D + P GGS + + R R +
Sbjct: 232 ---------------DRRIITYGTNPQADVRLVDLTP-AGGGSLFKVVFRDRKTGATHEI 275
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHE---SIACLKLPLSKFMGVSRRFDLI 426
A I L +PG HN N+ A IA +HE S ++ L+ F GV RRF
Sbjct: 276 ADIMLPMPGRHNASNATAAIAV----------AHELGLSGEAIRKALAGFGGVKRRFTRT 325
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
G G + DD+ HHP E+ AVL+AAR+ N ++AV QPH Y+RL L ++F
Sbjct: 326 GEWNGVTVIDDYGHHPVEIAAVLKAARES-TNGKIVAVVQPHRYTRLQSLFEEF 378
>gi|149921020|ref|ZP_01909480.1| UDP-N-acetylmuramate--alanine ligase [Plesiocystis pacifica SIR-1]
gi|149818152|gb|EDM77608.1| UDP-N-acetylmuramate--alanine ligase [Plesiocystis pacifica SIR-1]
Length = 471
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 155/425 (36%), Positives = 221/425 (52%), Gaps = 39/425 (9%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
F+ R IHFVGIGG G+S +A++ + G++V+G+DL + L GA +H GH
Sbjct: 2 FRKRDTHIHFVGIGGIGMSGIAEVLVNLGYQVTGTDLADTEITRRLTRLGATVHRGHGAE 61
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
+ D VV SSAI DN E++ A+ +P+ R L +L + V+GSH
Sbjct: 62 RLGDAD------VVVISSAIKPDNAEVVAARQRKIPVIPRAEMLGELMRLQQGLLVAGSH 115
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT SM+A VL G D T ++G V F D + G G+ FV EADE DG FL L P
Sbjct: 116 GKTTTTSMVAAVLHGAGLDPTVVIGGKVNSF-DSNARLGAGEIFVAEADESDGSFLVLPP 174
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
+ A++TN+D EH+D + +A+ F F ++ G IC D R++L ++ + T
Sbjct: 175 THAIITNIDAEHLDHYGSLEALLDAFVGFANRVPFYGMAAICVDDPNVRAVLPRLTKRT- 233
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
++YG S + Y S V G S + + G
Sbjct: 234 ------------------------VSYGIVSEDADYRASEIELVGGRSHFRVTAHGEDRG 269
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+ L +PG HNVLN+LA IA L ++ S E + L +F GV RRF + G +
Sbjct: 270 RFELAMPGRHNVLNALATIA----LCDEQGVSTE---VTRKALREFQGVQRRFTVRGDVD 322
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
G + DD+ HHPTE+RA L AAR P + L+A FQPH Y+RL +DFA +L AD V
Sbjct: 323 GVVVVDDYGHHPTELRATLAAARDAAPTRRLVATFQPHRYTRLRNHYEDFAASLDAADLV 382
Query: 491 VVSAV 495
V++ V
Sbjct: 383 VLTPV 387
>gi|348026412|ref|YP_004766217.1| UDP-N-acetylmuramate--L-alanine ligase [Megasphaera elsdenii DSM
20460]
gi|341822466|emb|CCC73390.1| UDP-N-acetylmuramate--L-alanine ligase [Megasphaera elsdenii DSM
20460]
Length = 462
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 136/419 (32%), Positives = 219/419 (52%), Gaps = 42/419 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+GI G+G+ A+A + +++G+ VSGSDL S E + GA + IG N++
Sbjct: 10 VHFIGIAGAGMRAIANVFIEKGYHVSGSDLKASPVTEQFAKKGARICIGQRPENLKD--- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSAI NVE+ A+ G+P+ R L + I+V+G+HGK+TT+S
Sbjct: 67 ---AQVVVISSAIRDTNVELAEARRRGIPVIHRSDALVHIMSWGKGISVAGAHGKTTTSS 123
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
ML V + D T ++G V SI G G + EADE DG FL +P +AVVTN
Sbjct: 124 MLGQVFEECHQDPTIVIGGEVDYLHSNSIL-GKGPYVIAEADESDGTFLKQNPYIAVVTN 182
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRV-GGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D V F++F++++ G V+C ++ R+L + ++
Sbjct: 183 IDADHMDHYGSLDNVIDAFKQFIQKLDPQDGLAVLCFENDKIRALAPKTER--------- 233
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+ ++YG D+ A+ + ++G + + + G + + L +
Sbjct: 234 ----------------RYVSYGLEQPADYQAKDLH-YIKGKLHFSVYKHGEKMGDMVLNV 276
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG HNVLN+LA A V G E IA +S F G RRF G + + D
Sbjct: 277 PGRHNVLNALATTA-VADACG---LPFEGIAS---AMSHFHGAKRRFQTKGFVGDVWVVD 329
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHPTE+ A L AAR ++ ++ +FQPH Y+R +L D + +A ++AD+++++ V
Sbjct: 330 DYAHHPTEINATLTAARDMGTHR-VVCLFQPHRYTRTKLLLDQYGSAFAKADKLIITDV 387
>gi|319776620|ref|YP_004139108.1| UDP-N-acetylmuramate:L-alanine ligase [Haemophilus influenzae
F3047]
gi|317451211|emb|CBY87444.1| UDP-N-acetylmuramate:L-alanine ligase [Haemophilus influenzae
F3047]
Length = 475
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 144/465 (30%), Positives = 235/465 (50%), Gaps = 68/465 (14%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+ R IHF+GIGG+G+S +A++ L +G+++SGSD+ + L +AGA ++IGH
Sbjct: 11 IIPEMRRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGH 70
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
+ +I+G + VV SSAI DN E++ +K +P+ +R LA++ + IAV+
Sbjct: 71 AEEHIEG------ASVVVVSSAIKDDNPELVASKQKRIPVIQRAQMLAEIMRFRHGIAVA 124
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEAD 239
G+HGK+TT +M++ + D P F +G + GKN + EAD
Sbjct: 125 GTHGKTTTTAMISMIYTQAKLD---------PTFVNGGLVKSAGKNAHLGASRYLIAEAD 175
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCA 298
E D FL L P V+VVTN++ +H+D +E D + +K+ + +FL + G V+C D
Sbjct: 176 ESDASFLHLQPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLPFYGLAVMCADDPVL 235
Query: 299 RSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS 358
L+ ++ + ++ITYGFS D+ E G
Sbjct: 236 MELVPKVGR-------------------------QVITYGFSEQADYRIEDYEQTGFQGH 270
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
++C + + L +PG HN LN+ A +A K + + A L+ L+ F G
Sbjct: 271 YTVICPNNERI-NVLLNVPGKHNALNATAALAVA------KEEGIANEAILE-ALADFQG 322
Query: 419 VSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
RRFD +G + DD+ HHPTEV ++AAR+ + +K ++ +FQPH YSR
Sbjct: 323 AGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVGVTIKAAREGWGDKRIVMIFQPHRYSRTR 382
Query: 475 VLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
L DDF LS+ D +++ L ++A ++ A + +C
Sbjct: 383 DLFDDFVQVLSQVDALIM-------LDVYAAGESPIVGADSKSLC 420
>gi|157827094|ref|YP_001496158.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia bellii OSU
85-389]
gi|166224722|sp|A8GW94.1|MURC_RICB8 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|157802398|gb|ABV79121.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia bellii OSU
85-389]
Length = 478
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 143/430 (33%), Positives = 218/430 (50%), Gaps = 54/430 (12%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG G+S +A++ G++V GSDL + + L G + +GH+ NI
Sbjct: 16 IHFIGIGGVGMSGIAEILHNLGYKVQGSDLSENYNTKRLEAYGIKIFVGHTPQNITN--- 72
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ VV SSAI ++N E+ A +PI +R LA+L +AVSGSHGK+TT S
Sbjct: 73 ---VSYVVVSSAINRNNPEVKEALERKIPIIRRAEMLAELMRLKCSVAVSGSHGKTTTTS 129
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVT 256
++A + +A G T I G + + Y G N+++ EADE D F+ + ++A++T
Sbjct: 130 LVACLFEAAGLHPTVINGGIINNRSTNA--YLGSSNYLIAEADESDATFISIPSTIAIIT 187
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N+D EH+D ++D D + + FR F+ + G V C D + R L++ I + + Y G
Sbjct: 188 NIDPEHLDYYKDFDTLINAFRSFITNLPFYGFAVCCIDHKIVRELVNNITERKVITY--G 245
Query: 317 VVS--------NQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP 368
+ S N S+D+ D KI PNV G +
Sbjct: 246 IDSDDAHITAFNISTDITSSTFDVKI---------------SLPNVSGVT---------I 281
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
+ +I++ PG HN+LNSLA I+ + L I +K + F GV RRF +
Sbjct: 282 IEKITIPTPGRHNILNSLAAISVGVEL-------DFGIKAIKNGFNSFKGVKRRFTKVAE 334
Query: 429 IYGCHIYDDFAHHPTEVRAVLQAARQRFPNK---ALIAVFQPHTYSRLVVLKDDFANALS 485
+ DD+AHHP E++A L A+ NK +IA+FQPH YSR+ L DDF
Sbjct: 335 YNQASVIDDYAHHPEEIKATLSTAKN-IANKQHGKVIAIFQPHRYSRMQHLFDDFMRCFD 393
Query: 486 EADQVVVSAV 495
+AD + ++ V
Sbjct: 394 DADLLYITDV 403
>gi|46580907|ref|YP_011715.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfovibrio vulgaris str.
Hildenborough]
gi|120601792|ref|YP_966192.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfovibrio vulgaris DP4]
gi|387154154|ref|YP_005703090.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfovibrio vulgaris
RCH1]
gi|48428298|sp|P61678.1|MURC_DESVH RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|166224686|sp|A1VBE9.1|MURC_DESVV RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|46450327|gb|AAS96975.1| UDP-N-acetylmuramate--alanine ligase [Desulfovibrio vulgaris str.
Hildenborough]
gi|120562021|gb|ABM27765.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfovibrio vulgaris DP4]
gi|311234598|gb|ADP87452.1| UDP-N-acetylmuramate/alanine ligase [Desulfovibrio vulgaris RCH1]
Length = 454
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 147/426 (34%), Positives = 220/426 (51%), Gaps = 43/426 (10%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
KN+ IH VGIGGSG+S +A++ L G+ V GSD+ S+ + L + GA + IGH
Sbjct: 1 MKNKVRTIHMVGIGGSGMSGIAEVLLNLGYAVHGSDMSDSAVVRRLRKIGAEIFIGHGAG 60
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N+ + +V S+A+ DN E+L A G+PI R LA+L IA++G+H
Sbjct: 61 NVSDAE------VLVKSTAVRDDNPEVLAAVEKGIPIIPRAEMLAELMRLRTGIAIAGTH 114
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S+ A + G D T I+G + + + G G+ + EADE DG FL L P
Sbjct: 115 GKTTTTSLTAAIFDVAGKDPTVIIGGRLNAY-GANARLGEGEYLIAEADESDGSFLCLFP 173
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
V VVTN+D +HVD + + + F F+ ++ G V+CGD R LL Q+K+
Sbjct: 174 IVNVVTNVDMDHVDFYAGQKEIDEAFVTFMNKVPFYGANVVCGDDPGVRRLLPQVKR--- 230
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAE-SVCPNVQGGSDYILCERGRPL 369
+++TYGF N AE + C S + + RG L
Sbjct: 231 ----------------------RVVTYGFGKDNALRAEVTSCAET---SVFTVFLRGGRL 265
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
++ L PG HN+LN+LA I L + S E C++ L++F GV RRF+ G
Sbjct: 266 GEVHLGQPGRHNILNALAAIGVAL----EAGISPEH--CIE-GLARFGGVGRRFERRGER 318
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
G + DD+ HHP E+ A L AR +P++ L+ VFQPH +SR L +F D+
Sbjct: 319 DGVTVVDDYGHHPVEIAATLATARSVYPDRRLVVVFQPHRFSRTQALFGEFCKVFEPVDK 378
Query: 490 VVVSAV 495
++++ +
Sbjct: 379 LLLTEI 384
>gi|452957591|gb|EME62955.1| UDP-N-acetylmuramate--L-alanine ligase [Amycolatopsis decaplanina
DSM 44594]
Length = 469
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 148/423 (34%), Positives = 217/423 (51%), Gaps = 50/423 (11%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
H +GIGG+G+S +A++ L +G +VSGSD S L GA + +G S N+
Sbjct: 13 HLIGIGGAGMSGIARILLARGAQVSGSDAKESRAFLSLRAQGAEIAVGQSAENLDAF--P 70
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
P++V+ S+AI DN E++ A+ G+ + R LA L E + + ++G+HGK++T SM
Sbjct: 71 EGPSSVIVSTAIKDDNPELVAARERGITVLHRAEALAGLMEDHRVACIAGTHGKTSTTSM 130
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
L L+ D + +G + + + +G G FV EADE DG FL SPSVAVVTN+
Sbjct: 131 LTVALQQCRLDPSFAIGGDLNE-SGANAHHGEGGVFVAEADESDGSFLAYSPSVAVVTNV 189
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVV 318
+ +H+D +A S+F FL +I GG L++CGD + A L Q ++ G++ V
Sbjct: 190 EPDHLDHHGTAEAYVSVFTDFLGRIVPGGLLIVCGDDEAADRLGAQ-AEERGIR-----V 243
Query: 319 SNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQ--- 375
+ G+ D K++ Y P GG + +ISLQ
Sbjct: 244 RRYGRSVTGE-DDAKVLDY-------------APAPDGG-----------VVRISLQGEE 278
Query: 376 ------IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
+PG H LN++A + + L + L L+ F GV RRF+ G
Sbjct: 279 IVLRVAVPGEHMALNAIAALLAGIEL-------GAPVEGLAEGLAAFGGVRRRFEFKGRS 331
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
+YDD+AHHPTEV A L+A R + +I VFQPH YSR +FA ALS AD+
Sbjct: 332 GDVRVYDDYAHHPTEVDAQLRAVRTAAGSGRVIVVFQPHLYSRTKAFSKEFAAALSLADE 391
Query: 490 VVV 492
VVV
Sbjct: 392 VVV 394
>gi|456062506|ref|YP_007501476.1| UDP-N-acetylmuramate--alanine ligase [beta proteobacterium CB]
gi|455439803|gb|AGG32741.1| UDP-N-acetylmuramate--alanine ligase [beta proteobacterium CB]
Length = 478
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 145/436 (33%), Positives = 223/436 (51%), Gaps = 61/436 (13%)
Query: 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGND 136
IHFVGIGG+G+S +A++ L G++VSGSDL + + L + GA +HIGH NI +
Sbjct: 7 QIHFVGIGGAGMSGIAEVLLNLGYQVSGSDLAEGAATKRLKDLGAVIHIGHDPKNIGTAE 66
Query: 137 GSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
AVV S+A+ +N E+L A++ VP+ +R L +L IA++G+HGK+TT
Sbjct: 67 ------AVVISTAVAGNNPEVLAARAAKVPVIQRAVMLGELMRLKQGIAIAGTHGKTTTT 120
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
S++A VL G D T ++G + + G G V+EADE D FL L P++ VVT
Sbjct: 121 SLVASVLAEGGLDPTFVIGGKL-NSAGANARLGQGDFIVVEADESDASFLQLFPAMEVVT 179
Query: 257 NLDWEHVDIFEDEDA-VKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
N+D +H+D ++ + A +K F +F++++ G V+C D R ++ + Q
Sbjct: 180 NIDADHMDTYQHDMARLKQAFVQFIQRMPFYGVAVLCIDDANVRDIIPFVSQ-------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER---------- 365
++ YG S D A +V +G + +R
Sbjct: 232 -----------------PVLRYGLSEDADIRASNV--RAEGTRMHFTVDRKTVRRHGNKP 272
Query: 366 GRPLAQISLQIPGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFD 424
GR ++ L +PG+HNV N+LA I L +GD+ A +K LS+F GV RRF
Sbjct: 273 GR--LEVQLNLPGLHNVRNALAAIGIATELGVGDE-------AIVK-ALSEFSGVGRRFQ 322
Query: 425 LIGTIY-----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDD 479
G I + DD+ HHP E+ A L AAR +P++ L+ FQPH ++R +
Sbjct: 323 KYGEIRLASGGSFTLIDDYGHHPVEMAATLSAARGAYPDRRLVLAFQPHRFTRTRDCFGE 382
Query: 480 FANALSEADQVVVSAV 495
F L D +V++ V
Sbjct: 383 FVQVLKNFDALVLTEV 398
>gi|406897791|gb|EKD41627.1| hypothetical protein ACD_73C00613G0001 [uncultured bacterium]
Length = 448
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 140/409 (34%), Positives = 205/409 (50%), Gaps = 42/409 (10%)
Query: 88 LSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVAS 147
+S +A++ L G+ VSG+D S+ L + GA +H GH ++ G+D VV S
Sbjct: 1 MSGIAEVLLNLGYPVSGTDQKSSTITRRLKKRGATIHYGHKGEHVIGSD------VVVVS 54
Query: 148 SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTTASMLAYVLKAM 206
SAI ++N E + A +PI R LA+L IAV+G+HGK+TT S++A VL A
Sbjct: 55 SAIKKENPEYVTALENKIPIISRAEMLAELMRFSKFGIAVAGTHGKTTTTSLVASVLYAG 114
Query: 207 GDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF 266
G D T I+G V F + G G V EADE DG FL L PS+AV+TN+D EH+D +
Sbjct: 115 GLDPTMIIGGKVNHFRTNARL-GKGDFMVAEADESDGSFLKLDPSIAVITNIDREHMDFY 173
Query: 267 EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLW 326
VK F F ++ G ++ CGD + L+ Q+ +
Sbjct: 174 GSFAKVKKAFVDFAGKVPFYGAVICCGDHPVVKELIPQMSK------------------- 214
Query: 327 GQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSL 386
++ITYG S W A + G + Y L G I L + G HNV NSL
Sbjct: 215 ------RVITYGLSDDVTWQARDIHFE-NGFTQYELFVNGEKKDTIKLNLLGEHNVRNSL 267
Query: 387 AVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVR 446
A + L +++S+++ LS F G+ RR +++ + DD+ HHP E++
Sbjct: 268 ATLIVANELGISQKKSNQA-------LSGFKGIHRRLEVLYKSGDNTLIDDYGHHPEEIK 320
Query: 447 AVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
A LQA R + LI +FQPH Y+R L DDF A S+ D + ++ +
Sbjct: 321 ATLQAIRMAYSG-PLITIFQPHRYTRTFDLLDDFKKAFSKTDDLYITDI 368
>gi|322513884|ref|ZP_08066963.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus ureae ATCC
25976]
gi|322120283|gb|EFX92230.1| UDP-N-acetylmuramate--L-alanine ligase [Actinobacillus ureae ATCC
25976]
Length = 475
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 146/473 (30%), Positives = 234/473 (49%), Gaps = 68/473 (14%)
Query: 60 TFKRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEA 119
F+ + +V R IHF+GIGG+G+S +A++ L +G+++SGSD+ + L+EA
Sbjct: 3 NFQDKVKKLVPEMRRVNQIHFIGIGGAGMSGIAEVLLNEGYQISGSDIAEGPVTKRLVEA 62
Query: 120 GANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE 179
GA + IGH NI G + VVASSAI N E+ AK +P+ +R LA++
Sbjct: 63 GAKVFIGHQAENIIG------ASVVVASSAIDDTNPEVKAAKEARIPVIQRAQMLAEIMR 116
Query: 180 KYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN------ 233
+ IA++G+HGK+TT +M++ + D P F +G + GKN
Sbjct: 117 FRHGIAIAGTHGKTTTTAMISMIYTEAQLD---------PTFVNGGLVKSAGKNAHLGAS 167
Query: 234 --FVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLV 290
+ EADE D FL L P V+VVTN++ +H+D + D + +K+ + +FL G V
Sbjct: 168 RYLIAEADESDASFLHLQPMVSVVTNIEPDHMDTYGGDFEQMKATYVKFLSNSPFYGLAV 227
Query: 291 ICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESV 350
+C D + + Q+ + +++TYGFS D+ E
Sbjct: 228 MCADDETVMEIAPQVGR-------------------------QVVTYGFSDKADYRIEDY 262
Query: 351 CPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLK 410
G ++C G + + L +PG HN LN+ A +A K + + A L
Sbjct: 263 QQTGFQGHYTVVCPNGERI-DVLLNVPGKHNALNATAALAVA------KEEGIGNEAILA 315
Query: 411 LPLSKFMGVSRRFDLIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQ 466
L+ F G RRFD +G+ + + DD+ HHPTEV ++AAR + +K ++ +FQ
Sbjct: 316 -ALADFQGAGRRFDQLGSFIRPNGKVMLVDDYGHHPTEVDVTIKAARSGWEDKRVVMIFQ 374
Query: 467 PHTYSRLVVLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
PH YSR L DDF LS+ D +++ L ++A ++ A + +C
Sbjct: 375 PHRYSRTRDLFDDFVQVLSQVDALIM-------LEVYAAGEAPIVGADSKALC 420
>gi|157828210|ref|YP_001494452.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia rickettsii str.
'Sheila Smith']
gi|165932913|ref|YP_001649702.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia rickettsii str.
Iowa]
gi|378721012|ref|YP_005285899.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia rickettsii str.
Colombia]
gi|378722366|ref|YP_005287252.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia rickettsii str.
Arizona]
gi|378723723|ref|YP_005288607.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia rickettsii str.
Hauke]
gi|379016724|ref|YP_005292959.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia rickettsii str.
Brazil]
gi|379017512|ref|YP_005293747.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia rickettsii str.
Hino]
gi|379018839|ref|YP_005295073.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia rickettsii str.
Hlp#2]
gi|166224724|sp|A8GRB9.1|MURC_RICRS RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|189029027|sp|B0BWS0.1|MURC_RICRO RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|157800691|gb|ABV75944.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia rickettsii str.
'Sheila Smith']
gi|165908000|gb|ABY72296.1| UDP-N-acetylmuramate--alanine ligase [Rickettsia rickettsii str.
Iowa]
gi|376325248|gb|AFB22488.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia rickettsii str.
Brazil]
gi|376326036|gb|AFB23275.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia rickettsii str.
Colombia]
gi|376327390|gb|AFB24628.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia rickettsii str.
Arizona]
gi|376330078|gb|AFB27314.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia rickettsii str.
Hino]
gi|376331419|gb|AFB28653.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia rickettsii str.
Hlp#2]
gi|376332738|gb|AFB29971.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia rickettsii str.
Hauke]
Length = 485
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 142/427 (33%), Positives = 215/427 (50%), Gaps = 48/427 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG G+S +A++ G++V GSDLV + + L G + +GH+ NI
Sbjct: 16 IHFIGIGGVGMSGIAEILYNLGYKVQGSDLVENYNTKRLESYGIKIFLGHAEQNITN--- 72
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ VV SSAI N EI A +PI +R LA+L +AVSGSHGK+TT S
Sbjct: 73 ---VSYVVISSAINPKNPEIKEALERKIPIIRRADMLAELMRLKCSVAVSGSHGKTTTTS 129
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVT 256
++A + +A G T I G + + Y G N+++ EADE D F+ + ++A++T
Sbjct: 130 LVACLFEAAGLCPTVINGGIINNKSTNA--YLGSSNYLIAEADESDATFIHIPSTIAIIT 187
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY--- 313
N+D EH+D + D + + FR F+ + G V C D + R L+D+I + + Y
Sbjct: 188 NIDPEHLDYYRDFETLIGAFRSFITNLPFYGFAVCCIDHKIVRKLVDEITERKIVTYGID 247
Query: 314 ---SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
+ + N ++D+ D KI PNV G + +
Sbjct: 248 SEDAHIIAFNINTDIASSTFDVKI---------------SLPNVLGTT---------IIE 283
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+I++ PG HN+LNSLA IA + L I +K + F GV RRF +
Sbjct: 284 KITIPTPGRHNILNSLAAIAVGIEL-------DFGIKAIKNGFNNFKGVKRRFTKVAEYN 336
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQ--RFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
I DD+AHHP E++A L A+ N +IA+FQPH YSR+ L DDF ++AD
Sbjct: 337 NASIIDDYAHHPEEIKATLATAKNIANKQNGKVIAIFQPHRYSRMQYLFDDFMLCFADAD 396
Query: 489 QVVVSAV 495
+ ++ +
Sbjct: 397 ILYITDI 403
>gi|52842820|ref|YP_096619.1| UDP-N-acetylmuramate--L-alanine ligase [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|378778509|ref|YP_005186948.1| UDP-N-acetylmuramate:L-alanine ligase MurC [Legionella pneumophila
subsp. pneumophila ATCC 43290]
gi|59798151|sp|Q5ZSA5.1|MURC_LEGPH RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|52629931|gb|AAU28672.1| UDP-N-acetylmuramate:L-alanine ligase MurC [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|364509325|gb|AEW52849.1| UDP-N-acetylmuramate:L-alanine ligase MurC [Legionella pneumophila
subsp. pneumophila ATCC 43290]
Length = 469
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 142/436 (32%), Positives = 227/436 (52%), Gaps = 48/436 (11%)
Query: 64 NEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANL 123
+E+ + R IHFVGIGG+G+ +A++ QG+ ++GSDL S ++ L G +
Sbjct: 4 SEQFLSPRMGRVEQIHFVGIGGAGMCGIAEVLHNQGYRITGSDLGESGTVQRLRSLGIQV 63
Query: 124 HIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL 183
+IGH + NI+G D VV SSA+ +N EI+ A+ + +P+ R LA+L +
Sbjct: 64 YIGHRLENIKGAD------VVVRSSAVDFNNPEIVAARELMIPVIPRAAMLAELMRFRHG 117
Query: 184 IAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDG 243
IA++G+HGK+TT S+++ +L G D + ++G + + G FV+EADE D
Sbjct: 118 IAIAGTHGKTTTTSLVSSLLAEGGLDPSFVIGGKLNSCGANAQL-GKSAYFVVEADESDA 176
Query: 244 CFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLL 302
FL L P +AVVTN+D +H+D +E D + +++ F FL + G V+C + + +L
Sbjct: 177 SFLFLKPMMAVVTNIDADHMDTYEGDFEKLRTTFLEFLHHLPFYGLAVVCLEDEEICRIL 236
Query: 303 DQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYIL 362
I++ T +TYGF + + ++ +G +
Sbjct: 237 PAIQRPT-------------------------LTYGFK--EEAHYRAINWTQKGMLSEFV 269
Query: 363 CERGRPLAQISLQI--PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVS 420
R P Q+++Q PG HNVLN+LA IA L D +SI L KF GV
Sbjct: 270 VVRPAPHKQLTIQFQYPGRHNVLNALASIAIATELGVDD----DSIV---RGLQKFQGVG 322
Query: 421 RRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVL 476
RRF ++G I DD+ HHP E+ + + A R+ +P + L+ VFQPH Y+R L
Sbjct: 323 RRFQMLGEKQFEKGAAIIVDDYGHHPQEILSTIDAFRRVWPERRLVHVFQPHRYTRTQSL 382
Query: 477 KDDFANALSEADQVVV 492
F + LS +D++++
Sbjct: 383 HRQFVDVLSLSDELLL 398
>gi|220906333|ref|YP_002481644.1| UDP-N-acetylmuramate--L-alanine ligase [Cyanothece sp. PCC 7425]
gi|254765995|sp|B8HWY0.1|MURC_CYAP4 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|219862944|gb|ACL43283.1| UDP-N-acetylmuramate/alanine ligase [Cyanothece sp. PCC 7425]
Length = 482
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 150/437 (34%), Positives = 220/437 (50%), Gaps = 51/437 (11%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
VDF R HF+GIGG G+SALA + +K VSGSD + E L G +
Sbjct: 5 VDFGGRP--FHFIGIGGIGMSALAHVLVKHKLPVSGSDARLNPITEQLQHLGVRIFPQQE 62
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSG 188
+N+ + P VV S+AI DN E A +G PI R LA L E+Y IAV+G
Sbjct: 63 ATNLLAL--PQLPQ-VVCSTAIHADNPEYKMAVELGCPILHRSDLLAALIERYQSIAVAG 119
Query: 189 SHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGL 248
+HGK+TT+SM+ Y+L G D T I+G V Q +G+ G G+ V EADE DG
Sbjct: 120 THGKTTTSSMIGYLLLQGGVDPTIIIGGEV-QAWEGNARTGMGEYLVAEADESDGSLAKF 178
Query: 249 SPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQD 308
+P + V+TN++ +H D + + + V IF F + +V C D R L +
Sbjct: 179 APQIGVITNIELDHPDHYSNLEQVIKIFETFANHCQT---VVACWDCPTIRDRLTVLPDQ 235
Query: 309 TGLKYSGGVVSNQSSDLWGQGHDYKI--ITYGFSSFNDWYAESVCPNVQGGSDYILCERG 366
+ + YS + +S G DY + I+YG P G+ + ERG
Sbjct: 236 SVVSYS---LFRES------GADYSVDQISYG-------------PQ---GTLAQVWERG 270
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
L ++S ++ G HN+ N+LA +A V L+G + +++F G RRF++
Sbjct: 271 ELLGELSTKLLGAHNLKNALAAVA-VGRLLG------LDFITISRGIARFEGARRRFEVR 323
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRF--------PNKALIAVFQPHTYSRLVVLKD 478
G +G DD+AHHP+E+RA L A R + P + L+AVFQPH Y+R
Sbjct: 324 GEAHGIRFVDDYAHHPSEIRATLAAGRLQLKSREEFISPWQRLVAVFQPHRYTRTFTFLT 383
Query: 479 DFANALSEADQVVVSAV 495
+F+ A +AD VV++ +
Sbjct: 384 EFSQAFGDADLVVLTDI 400
>gi|400405319|ref|YP_006588178.1| UDP-N-acetylmuramate--L-alanine ligase [secondary endosymbiont of
Ctenarytaina eucalypti]
gi|400363682|gb|AFP84750.1| UDP-N-acetylmuramate--L-alanine ligase [secondary endosymbiont of
Ctenarytaina eucalypti]
Length = 500
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 150/432 (34%), Positives = 224/432 (51%), Gaps = 50/432 (11%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGI G+G+S +A++ +G+++SGSDL ++ L + GA ++ H NI
Sbjct: 32 RVRHIHFVGICGAGMSGIAEVLANEGYQISGSDLTPNAVARQLTDLGAQIYFTHQPENIS 91
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
+ VV SSAI DN EI+ AK +P+ +R LA+L + IA++G+HGK+
Sbjct: 92 DA------SVVVVSSAISADNPEIVAAKRARIPVIQRAEMLAELMRFRHGIAIAGTHGKT 145
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT SM+A + G D T + G V + G + + EADE D FL L P VA
Sbjct: 146 TTTSMVASIYAEAGLDPTFVNGGLV-KAAGAHARLGCSRYLIAEADESDASFLHLQPMVA 204
Query: 254 VVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
++TN++ +H+D ++ D + +K F FL + G V+C D R LL I +
Sbjct: 205 IITNIEADHMDTYQGDFENLKQTFINFLHNLPFYGRAVLCIDDPVIRELLPCIGR----- 259
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQI 372
++ITYGFS D++ + G +IL + +P ++
Sbjct: 260 --------------------QMITYGFSDDADFHVTDYFQDGARGR-FILNRQNKPKLKV 298
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG----- 427
+ PG HN LN++A IA ++ + ESI LK L F G RRFD +G
Sbjct: 299 EVNAPGRHNALNAVAAIAEAT----EEGINDESI--LKAML-HFQGTGRRFDDLGGYDLT 351
Query: 428 TIYG----CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANA 483
+ G + DD+ HHPTEV A ++AAR +P+K L+ VFQPH Y+R L +DFAN
Sbjct: 352 KVNGKTGEIMLVDDYGHHPTEVAATIKAARMGWPDKRLVMVFQPHRYTRTRDLYNDFANV 411
Query: 484 LSEADQVVVSAV 495
LS D +++ V
Sbjct: 412 LSSVDVLLILEV 423
>gi|375101834|ref|ZP_09748097.1| UDP-N-acetylmuramate--alanine ligase [Saccharomonospora cyanea
NA-134]
gi|374662566|gb|EHR62444.1| UDP-N-acetylmuramate--alanine ligase [Saccharomonospora cyanea
NA-134]
Length = 474
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 139/416 (33%), Positives = 208/416 (50%), Gaps = 36/416 (8%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
H +GIGG+G+S +A++ L +G VSGSD S L GA + +G N+ D +
Sbjct: 18 HLIGIGGAGMSGIARILLARGAHVSGSDAKDSRAFLTLRAQGARIEVGQKAENLDVFDDT 77
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
P+AV+ S+AI + N E A+ +P+ R LA L E + + ++G+HGK++T SM
Sbjct: 78 --PSAVIVSTAIKKTNPEFAAARERDIPVLHRAEALAALMEDHRVACIAGTHGKTSTTSM 135
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
L L+ D + +G + + + +G G FV EADE DG FL SPSVAVVTN+
Sbjct: 136 LTVALQHCRLDPSFAIGGDLNE-SGANAHHGEGGIFVAEADESDGSFLSYSPSVAVVTNI 194
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVV 318
+ +H+D DA ++F F+++I GG LV+C D
Sbjct: 195 EPDHLDHHGTADAYHAVFSEFVRRIEPGGVLVVCADDP---------------------- 232
Query: 319 SNQSSDLWGQGHDYKIITYGFSSFNDWYAESV--CPNVQGGSDYILCERGRPLAQISLQI 376
+ + +G ++ YG S+ + A + P GG+ I+ G ++ + +
Sbjct: 233 AAAALADRAEGIGVRVRRYGRSAAGESDARVLGYSPAEDGGTVRIVL--GGEQLRVRVAV 290
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG H N++ + + L D E +A F GV RRF+ G +YD
Sbjct: 291 PGEHMAFNAVGALLAGIELGADPEALVEGLAA-------FGGVRRRFEFKGRAADVRVYD 343
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
D+AHHPTEV A L+A RQ ++ VFQPH YSR +FA AL AD+VVV
Sbjct: 344 DYAHHPTEVAAQLRAVRQTAGGGRVVVVFQPHLYSRTKAFAGEFAEALGLADEVVV 399
>gi|54298603|ref|YP_124972.1| UDP-N-acetylmuramate--L-alanine ligase [Legionella pneumophila str.
Paris]
gi|148358651|ref|YP_001249858.1| UDP-N-acetylmuramate:L-alanine ligase MurC [Legionella pneumophila
str. Corby]
gi|296108259|ref|YP_003619960.1| UDP-N-acetylmuramate-L-alanine ligase MurC [Legionella pneumophila
2300/99 Alcoy]
gi|59798137|sp|Q5X1S6.1|MURC_LEGPA RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|166224700|sp|A5IAW2.1|MURC_LEGPC RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|53752388|emb|CAH13820.1| UDP-N-acetylmuramate--L-alanine ligase [Legionella pneumophila str.
Paris]
gi|148280424|gb|ABQ54512.1| UDP-N-acetylmuramate:L-alanine ligase MurC [Legionella pneumophila
str. Corby]
gi|295650161|gb|ADG26008.1| UDP-N-acetylmuramate-L-alanine ligase MurC [Legionella pneumophila
2300/99 Alcoy]
gi|307611493|emb|CBX01164.1| UDP-N-acetylmuramate--L-alanine ligase [Legionella pneumophila
130b]
Length = 469
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 142/436 (32%), Positives = 227/436 (52%), Gaps = 48/436 (11%)
Query: 64 NEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANL 123
+E+ + R IHFVGIGG+G+ +A++ QG+ ++GSDL S ++ L G +
Sbjct: 4 SEQFLSPRMGRVEQIHFVGIGGAGMCGIAEVLHNQGYRITGSDLGESGTVQRLRSLGIQV 63
Query: 124 HIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL 183
+IGH + NI+G D VV SSA+ +N EI+ A+ + +P+ R LA+L +
Sbjct: 64 YIGHRLENIKGAD------VVVRSSAVDFNNPEIVAARELMIPVIPRAAMLAELMRFRHG 117
Query: 184 IAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDG 243
IA++G+HGK+TT S+++ +L G D + ++G + + G FV+EADE D
Sbjct: 118 IAIAGTHGKTTTTSLVSSLLAEGGLDPSFVIGGKLNSCGANAQL-GKSAYFVVEADESDA 176
Query: 244 CFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLL 302
FL L P +AVVTN+D +H+D +E D + +++ F FL + G V+C + + +L
Sbjct: 177 SFLFLKPMMAVVTNIDADHMDTYEGDFEKLRTTFLEFLHHLPFYGLAVVCLEDEEICRIL 236
Query: 303 DQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYIL 362
I++ T +TYGF + + ++ +G +
Sbjct: 237 PAIQRPT-------------------------LTYGFK--EEAHYRAINWTQKGMLSEFV 269
Query: 363 CERGRPLAQISLQI--PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVS 420
R P Q+++Q PG HNVLN+LA IA L D +SI L KF GV
Sbjct: 270 VVRPAPHKQLTIQFQYPGRHNVLNALASIAIATELGVDD----DSIV---RGLQKFQGVG 322
Query: 421 RRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVL 476
RRF ++G I DD+ HHP E+ + + A R+ +P + L+ VFQPH Y+R L
Sbjct: 323 RRFQMLGEKQFEKGAAIIVDDYGHHPQEILSTIDAFRRVWPERRLVHVFQPHRYTRTQSL 382
Query: 477 KDDFANALSEADQVVV 492
F + LS +D++++
Sbjct: 383 HRQFVDVLSLSDELLL 398
>gi|399116610|emb|CCG19417.1| UDP-N-acetylmuramate--L-alanine ligase [Taylorella asinigenitalis
14/45]
Length = 472
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 154/437 (35%), Positives = 232/437 (53%), Gaps = 51/437 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K++ +HFVGIGGSG+S +A++ L G+++SGSDL SS + L + GA ++ GHS
Sbjct: 1 MKHKIKHLHFVGIGGSGMSGIAEVLLNLGYKISGSDLSLSSTTDRLEKLGATIYEGHSAD 60
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N+ G D A+V S+A+ Q N E+L A++ +P+ R LA+L + IAV+G+H
Sbjct: 61 NLNGAD------AIVVSTAVSQGNPEVLKARAFRIPVVPRAIMLAELMRLKSGIAVAGTH 114
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S++A VL G D T ++G + + G G V+EADE D FL L P
Sbjct: 115 GKTTTTSLVASVLATGGFDPTFVIGGRL-NSAGANAKLGTGDYIVVEADESDASFLYLLP 173
Query: 251 SVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
+A++TN+D +H+D + D ++ F F +++ G ++C D + RS+L I
Sbjct: 174 IIAIITNIDADHMDTYAHDVAKLRGAFVEFSQRLPFYGSAIVCTDDENVRSILPFIS--- 230
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE-RGRP 368
I TYGF+ ++ A +V N +L + +G+
Sbjct: 231 ----------------------CSITTYGFNEEANFRAINVKNNGTRMEFEVLRKYQGKT 268
Query: 369 LAQ--ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
L Q +SL IPG HNVLN+LA IA V T +G E LS+F GVSRRF I
Sbjct: 269 LPQLYVSLNIPGKHNVLNALAAIA-VGTEVGVADSDIEK------ALSEFNGVSRRFTQI 321
Query: 427 GTIY--------GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKD 478
G + DD+ HHP E+ A + AAR +P++ L+ FQPH Y+R +
Sbjct: 322 GDFEVPEKNGGGKFTVIDDYGHHPVEMEATIAAARGAWPDRRLVFAFQPHRYTRTRDCFE 381
Query: 479 DFANALSEADQVVVSAV 495
DF LS+ D ++++ V
Sbjct: 382 DFVKVLSKTDVLILAEV 398
>gi|374577247|ref|ZP_09650343.1| UDP-N-acetylmuramate--alanine ligase [Bradyrhizobium sp. WSM471]
gi|374425568|gb|EHR05101.1| UDP-N-acetylmuramate--alanine ligase [Bradyrhizobium sp. WSM471]
Length = 467
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 149/426 (34%), Positives = 227/426 (53%), Gaps = 46/426 (10%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ L G+ V GSD + ++ L + GA + +GH N+ G
Sbjct: 8 GPIHFVGIGGIGMSGIAEVLLNLGYSVQGSDASDNYNLDRLRKNGARVSVGHKAENVDGA 67
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
+ VV S+AI +DN E+ A+ +P+ +R LA+L + +A++G+HGK+TT
Sbjct: 68 E------VVVVSTAIKRDNPELTAARERRIPVVRRAEMLAELMRLKSCVAIAGTHGKTTT 121
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
+M+A +L A G D T I G + + + G G V+EADE DG FL L VA+V
Sbjct: 122 TTMVATLLDAGGLDPTVINGGIINAYGSNARL-GAGDWMVVEADESDGTFLKLPTEVAIV 180
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D F+ +AV+ FR F++ + G V+C D ++L+ +I+
Sbjct: 181 TNVDPEHLDHFKTFEAVQDAFRHFVENLPFYGFAVMCIDHPVVQTLVGKIE--------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR------PL 369
D +IITYG + D + P + GGS + + R R +
Sbjct: 232 ---------------DRRIITYGENPQADVRFVDLTP-MGGGSKFKVAFRDRKTGTVHEI 275
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
A + L +PG HN N+ A IA R+ S ++ ++ F GV RRF G
Sbjct: 276 ADLMLPMPGRHNASNATAAIAVA-------RELGVSDEAIRKAIAGFGGVKRRFTKTGEW 328
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
G + DD+ HHP E+ AVL+AAR+ K ++AV QPH Y+RL L ++F ++AD
Sbjct: 329 NGVTVIDDYGHHPVEIAAVLKAARESTSGK-IVAVVQPHRYTRLQSLFEEFCTCFNDADA 387
Query: 490 VVVSAV 495
V+V+ V
Sbjct: 388 VIVAEV 393
>gi|422325083|ref|ZP_16406120.1| UDP-N-acetylmuramate-alanine ligase [Rothia mucilaginosa M508]
gi|353343792|gb|EHB88107.1| UDP-N-acetylmuramate-alanine ligase [Rothia mucilaginosa M508]
Length = 499
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 142/431 (32%), Positives = 215/431 (49%), Gaps = 61/431 (14%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G +HF+GIGG+G+SA+A L L+ G VSGSD S+ +E L AGA + + NI
Sbjct: 29 GRVHFIGIGGAGMSAIAALMLQAGVTVSGSDRAESATVESLRAAGARVGVPQQAENIVDV 88
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D VV S+AI +DN E++ A++ G+ + R LA + + ++AV+G+HGKSTT
Sbjct: 89 D------TVVISTAIREDNPELVAARAQGLRVLHRSEALAAVMGEAQVVAVAGTHGKSTT 142
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN-----------FVLEADEYDGC 244
+SM++ + +G D P F G++ G G N FV EADE DG
Sbjct: 143 SSMISVMFDQLGAD---------PSFAVGTVIAGRGTNAHLGAQGPESIFVAEADESDGS 193
Query: 245 FLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 304
F+ P++AVVTN++ +H+D +E ++ V F RF+ + G +V C D A +L +
Sbjct: 194 FVRYRPAIAVVTNVEPDHLDFYETDERVFEAFNRFVGSLAPNGVVVTCADDAGAAALAAR 253
Query: 305 IKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYIL-- 362
+ ++TYG S+ D + S ++
Sbjct: 254 SRAAG----------------------VPVVTYGESADADLRISEITSAGSSSSSHLSWS 291
Query: 363 --CE--RGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
C R ++L++PG+HN LN+ A A+ L S A + L++F+G
Sbjct: 292 FECHGVRYEGEQDLALKVPGIHNQLNASAAFASALI-------SGYEAADIARALAEFVG 344
Query: 419 VSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKD 478
RRF L G + G ++DD+AHHPTEV L+ R L +FQPH +SR
Sbjct: 345 ADRRFTLRGEVAGVKVFDDYAHHPTEVFRALETGRTVADGHNLYVIFQPHLFSRTREFAK 404
Query: 479 DFANALSEADQ 489
+FA ALS AD+
Sbjct: 405 EFAEALSMADR 415
>gi|429757430|ref|ZP_19289966.1| UDP-N-acetylmuramate--L-alanine ligase [Actinomyces sp. oral taxon
181 str. F0379]
gi|429175100|gb|EKY16553.1| UDP-N-acetylmuramate--L-alanine ligase [Actinomyces sp. oral taxon
181 str. F0379]
Length = 452
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 140/409 (34%), Positives = 209/409 (51%), Gaps = 38/409 (9%)
Query: 88 LSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVAS 147
+S +A+L +G EVSGSD S ++ L +AG + +GH +++ + VV S
Sbjct: 1 MSVVAELLKDRGLEVSGSDQKESPILDHLRDAGIEVFVGHDAAHVPAD------AVVVVS 54
Query: 148 SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMG 207
+A+ + N E+ A+ G + R LA +AV+G+HGK+TT++ML+ L+ G
Sbjct: 55 TAVRESNPELAEARRRGQSVIHRSQALALAASGMRFVAVAGAHGKTTTSAMLSMALRDAG 114
Query: 208 DDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFE 267
+D + VGA +PQ G+ + G G FV EADE DG FL +P + +VTN++ +H+D +
Sbjct: 115 EDPSIAVGAVIPQLGSGA-YLGSGDVFVAEADESDGSFLNYTPWIEIVTNVEPDHLDRYG 173
Query: 268 DEDAVKSIFRRFLKQIRVGGHLVICGD----SQCARSLLDQIKQDTGLKYSGGVVSNQSS 323
+A + +F F+ +R GG LV CG+ ++ AR Q SG ++S+
Sbjct: 174 SREAFEQVFVDFVGCLRPGGTLVCCGEDGGSARLARYARTQGIDTVTYARSG----HESA 229
Query: 324 DLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVL 383
DL G D E + G + L G A+I L +PG+HN+L
Sbjct: 230 DLGGSA--------------DVIIEEA--HTDGHTASALLVWGDVKAEIHLTVPGIHNLL 273
Query: 384 NSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPT 443
N+ A + L D + S+A F G SRRF+ G + ++DD+AHHPT
Sbjct: 274 NACAAWIAGVRLGTDAQTMAHSLAA-------FAGTSRRFEFKGEVGTRRLFDDYAHHPT 326
Query: 444 EVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
EV A LQ AR + + VFQPH YSR + FA ALS AD V V
Sbjct: 327 EVAAALQQARTAAGDGEVSVVFQPHLYSRTQAFAERFAQALSHADHVYV 375
>gi|319897394|ref|YP_004135591.1| udp-n-acetylmuramate:l-alanine ligase [Haemophilus influenzae
F3031]
gi|317432900|emb|CBY81266.1| UDP-N-acetylmuramate:L-alanine ligase [Haemophilus influenzae
F3031]
Length = 475
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 144/465 (30%), Positives = 235/465 (50%), Gaps = 68/465 (14%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+ R IHF+GIGG+G+S +A++ L +G+++SGSD+ + L +AGA ++IGH
Sbjct: 11 IIPEMRRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGH 70
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
+ +I+G + VV SSAI DN E++ +K +P+ +R LA++ + IAV+
Sbjct: 71 AEEHIKG------ASVVVVSSAIKDDNPELVASKQKRIPVIQRAQMLAEIMRFRHGIAVA 124
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEAD 239
G+HGK+TT +M++ + D P F +G + GKN + EAD
Sbjct: 125 GTHGKTTTTAMISMIYTQAKLD---------PTFVNGGLVKSAGKNAHLGASRYLIAEAD 175
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCA 298
E D FL L P V+VVTN++ +H+D +E D + +K+ + +FL + G V+C D
Sbjct: 176 ESDASFLHLQPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLPFYGLAVMCADDPVL 235
Query: 299 RSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS 358
L+ ++ + ++ITYGFS D+ E G
Sbjct: 236 MELVPKVGR-------------------------QVITYGFSEQADYRIEDYEQTGFQGH 270
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
++C + + L +PG HN LN+ A +A K + + A L+ L+ F G
Sbjct: 271 YTVICPNNERI-NVLLNVPGKHNALNATAALAIA------KEEGIGNEAILE-ALADFQG 322
Query: 419 VSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
RRFD +G + DD+ HHPTEV ++AAR+ + +K ++ +FQPH YSR
Sbjct: 323 AGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVGVTIKAAREGWGDKRIVMIFQPHRYSRTR 382
Query: 475 VLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
L DDF LS+ D +++ L ++A ++ A + +C
Sbjct: 383 DLFDDFVQVLSQVDALIM-------LDVYAAGEAPIVGADSKSLC 420
>gi|389865104|ref|YP_006367345.1| UDP-N-acetyl-muramate:alanine ligase, L-alanine adding enzyme
[Modestobacter marinus]
gi|388487308|emb|CCH88866.1| UDP-N-acetyl-muramate:alanine ligase, L-alanine adding enzyme
[Modestobacter marinus]
Length = 490
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 150/423 (35%), Positives = 218/423 (51%), Gaps = 43/423 (10%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G +HF+GIGG+G+S +A++ L +G VSG+D S M GL GA + +GH ++
Sbjct: 20 GAVHFIGIGGAGMSGIARIMLARGLRVSGTDRRDSPAMRGLAALGARVEVGHDAEHL--G 77
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D + VV S+AI +N E++ A+ G+ + R LA + +AV+G+HGK++T
Sbjct: 78 DAA----TVVVSTAIRAENPELVAARERGLRVVPRAVALAAVMAGRRSVAVAGTHGKTST 133
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGG-GKNFVLEADEYDGCFLGLSPSVAV 254
SML ++A G D + +G + + GS + G G F+ EADE D FL L+P A+
Sbjct: 134 TSMLTVAVQACGVDPSFAIGGTLNE--SGSNAHAGQGDVFLAEADESDRSFLLLAPHGAI 191
Query: 255 VTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYS 314
VTN++ +H+D + D AV++ F F++ + G LV+C D D G
Sbjct: 192 VTNVEADHLDNYGDLAAVEAAFDAFVRTVADDGFLVLCAD-------------DPGAARL 238
Query: 315 GGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAES--VCPNVQGGSDYILCERGRPLAQI 372
GV + G ++ TYG D V P+ G+ Y G+ L ++
Sbjct: 239 AGVAA---------GTPVRLRTYGLQPGADLQLLDLRVAPD---GTRYTAVLDGQSLGEV 286
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC 432
+++PG H LNS A + L L A L L +F GV RRF+L G G
Sbjct: 287 HIRLPGAHMALNSAAALLAGLELG-------LPAAGLIGGLGRFGGVHRRFELKGVAAGV 339
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+YDD+AHHPTEV A L+AAR + L+ +FQPH YSR F AL ADQVVV
Sbjct: 340 RVYDDYAHHPTEVAAQLRAARAVTGSGRLLVLFQPHLYSRTAQFATGFGEALGLADQVVV 399
Query: 493 SAV 495
V
Sbjct: 400 MEV 402
>gi|254805545|ref|YP_003083766.1| UDP-N-acetylmuramate--L-alanine ligase [Neisseria meningitidis
alpha14]
gi|254669087|emb|CBA07638.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis
alpha14]
Length = 506
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 144/450 (32%), Positives = 223/450 (49%), Gaps = 50/450 (11%)
Query: 56 LTNCTFKRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEG 115
+T + E + KNR IHFVGIGG G+S +A++ GF+VSGSD ++ E
Sbjct: 24 ITPLRIENPPERNIMMKNRVTNIHFVGIGGVGMSGIAEVLHNLGFKVSGSDQARNAATEH 83
Query: 116 LLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLA 175
L G ++ GH+ ++ G N VV S+A+ ++N E++ A +P+ R LA
Sbjct: 84 LGSLGIQVYPGHTAEHVNG------ANVVVTSTAVKKENPEVVAALEQQIPVIPRALMLA 137
Query: 176 KLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFV 235
+L + IA++G+HGK+TT S+ A +L A G D T ++G + + G G+ V
Sbjct: 138 ELMRFRDGIAIAGTHGKTTTTSLTASILGAAGLDPTFVIGGKL-NAAGTNARLGKGEYIV 196
Query: 236 LEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGD 294
EADE D FL L+P ++VVTN+D +H+D + + + F F+ ++ G +C D
Sbjct: 197 AEADESDASFLHLTPIMSVVTNIDEDHMDTYGHSVEKLHQAFIDFIHRMPFYGKAFLCID 256
Query: 295 SQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNV 354
S+ R++L ++ + Y+ TYG D YA + NV
Sbjct: 257 SEHVRAILPKVSK----PYA---------------------TYGLDDTADIYATDI-ENV 290
Query: 355 QGGSDYILCERGRPLAQ----ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLK 410
+ + + + Q + L +PG HNVLN+LA I L + S+ ++
Sbjct: 291 GAQMKFTVHVQMKGHEQGSFEVVLNMPGRHNVLNALAAIGVAL-------EVGASVEAIQ 343
Query: 411 LPLSKFMGVSRRFDLIGTIY-----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVF 465
L F GV RRF G I + DD+ HHP E+ A L AAR +P K L+ F
Sbjct: 344 KGLLGFEGVGRRFQKYGDIKLPNGGTALLVDDYGHHPVEMAATLSAARGAYPEKRLVLAF 403
Query: 466 QPHTYSRLVVLKDDFANALSEADQVVVSAV 495
QPH Y+R L +DF L+ D +V++ V
Sbjct: 404 QPHRYTRTRDLFEDFTKVLNTVDALVLTEV 433
>gi|90424796|ref|YP_533166.1| UDP-N-acetylmuramate--L-alanine ligase [Rhodopseudomonas palustris
BisB18]
gi|109892731|sp|Q211T9.1|MURC_RHOPB RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|90106810|gb|ABD88847.1| UDP-N-acetylmuramate--L-alanine ligase [Rhodopseudomonas palustris
BisB18]
Length = 467
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 150/414 (36%), Positives = 219/414 (52%), Gaps = 52/414 (12%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G+ V GSD + + L + G +H+GH N+ G
Sbjct: 8 GPIHFVGIGGIGMSGIAEVLCNLGYTVQGSDASEGANVSRLRDKGIAIHVGHQAENVAGA 67
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D VV S+AI +DN E+L A++ +P+ +R LA+L + +A++G+HGK+TT
Sbjct: 68 D------VVVVSTAIKRDNPELLAARAQRIPVVRRAEMLAELMRLKSCVAIAGTHGKTTT 121
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L A D T I G + + + G G+ V+EADE DG FL L VA+V
Sbjct: 122 TSMVAALLDAGEFDPTVINGGIINAYGTNARL-GAGEWMVVEADESDGTFLKLPADVAIV 180
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D F+ DAV+ FR F++ + G V+C D ++L+ +I+
Sbjct: 181 TNVDPEHLDHFKTFDAVQEAFRDFVENVPFYGFAVMCIDHPVVQALVGKIE--------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR------PL 369
D +IITYG + D + PN G S + + R R +
Sbjct: 232 ---------------DRRIITYGENPQADVRLLDLTPN-GGSSAFRVAFRDRKAGTAHEI 275
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHE---SIACLKLPLSKFMGVSRRFDLI 426
A + L +PG HN LN+ A IA +HE S ++ L+ F GV RRF
Sbjct: 276 ADLVLPMPGRHNALNATAAIAV----------AHELGLSDDTIRKALAGFGGVRRRFTKT 325
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
G G I DD+ HHP E+ AVL+AAR+ K +IAV QPH ++RL L ++F
Sbjct: 326 GEWNGVTIIDDYGHHPVEIAAVLKAARESTKGK-VIAVVQPHRFTRLQSLFEEF 378
>gi|186477420|ref|YP_001858890.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia phymatum
STM815]
gi|229486477|sp|B2JHF9.1|MURC_BURP8 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|184193879|gb|ACC71844.1| UDP-N-acetylmuramate--alanine ligase [Burkholderia phymatum STM815]
Length = 464
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 147/424 (34%), Positives = 214/424 (50%), Gaps = 46/424 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ + G++VSGSDL ++ E L GA + IGH +NI+G
Sbjct: 8 IHFVGIGGAGMSGIAEVLVNLGYQVSGSDLSRNAVTERLAALGARIAIGHDAANIEG--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
NAVV S+A+ DN E+L A+ +PI R LA+L IA++G+HGK+TT S
Sbjct: 65 ---ANAVVVSTAVRSDNPEVLAARHRRIPIVPRAVMLAELMRLKQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL A G D T ++G + + G G V EADE D FL L P + V+TN
Sbjct: 122 LVASVLAAGGLDPTFVIGGRLIS-AGANARLGTGDFIVAEADESDASFLNLFPVIEVITN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D +K F F ++ G V+C D + +L + +
Sbjct: 181 IDADHMDTYGHDFARLKQAFIEFTHRLPFYGIAVLCVDDPNVKEILPFVSK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
II YGF+ A +V +G + P I L +
Sbjct: 232 ----------------PIIRYGFAPDAQVRAVNVEAR-EGKMHFTAMREDAPPIDIVLNL 274
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----GC 432
PG+HNV N+LA IA L A ++ L+ F GV RRF G + G
Sbjct: 275 PGLHNVQNALAAIAIATEL-------EVKDADIQRALADFNGVGRRFQRYGEVTVTSGGA 327
Query: 433 H-IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ + DD+ HHP E+ A + AAR FP+K L+ FQPH ++R +DF LS D +V
Sbjct: 328 YTLVDDYGHHPVEMAATIAAARGAFPDKRLVLAFQPHRFTRTRDCFEDFVKVLSTVDALV 387
Query: 492 VSAV 495
++ V
Sbjct: 388 LTEV 391
>gi|385327773|ref|YP_005882076.1| UDP-N-acetylmuramate--L-alanine ligase [Neisseria meningitidis
alpha710]
gi|385338634|ref|YP_005892507.1| UDP-N-acetylmuramate-L-alanine ligase
(UDP-N-acetylmuramoyl-L-alanine synthetase) [Neisseria
meningitidis WUE 2594]
gi|11272240|pir||A81777 UDP-N-acetylmuramate-alanine ligase (EC 6.3.2.8) NMA2061 [imported]
- Neisseria meningitidis (strain Z2491 serogroup A)
gi|121052817|emb|CAM09164.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis Z2491]
gi|308388625|gb|ADO30945.1| UDP-N-acetylmuramate-L-alanine ligase [Neisseria meningitidis
alpha710]
gi|319411048|emb|CBY91448.1| UDP-N-acetylmuramate-L-alanine ligase
(UDP-N-acetylmuramoyl-L-alanine synthetase) [Neisseria
meningitidis WUE 2594]
Length = 506
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 144/450 (32%), Positives = 223/450 (49%), Gaps = 50/450 (11%)
Query: 56 LTNCTFKRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEG 115
+T + E + KNR IHFVGIGG G+S +A++ GF+VSGSD ++ E
Sbjct: 24 ITPLRIENPPERNIMMKNRVTNIHFVGIGGVGMSGIAEVLHNLGFKVSGSDQARNAATEH 83
Query: 116 LLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLA 175
L G ++ GH+ ++ G D VV S+A+ ++N E++ A +P+ R LA
Sbjct: 84 LGSLGIQVYPGHTAEHVNGAD------VVVTSTAVKKENPEVVAALEQQIPVIPRALMLA 137
Query: 176 KLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFV 235
+L + IA++G+HGK+TT S+ A +L A G D T ++G + + G G+ V
Sbjct: 138 ELMRFRDGIAIAGTHGKTTTTSLTASILGAAGLDPTFVIGGKL-NAAGTNARLGKGEYIV 196
Query: 236 LEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGD 294
EADE D FL L+P ++VVTN+D +H+D + + + F F+ ++ G +C D
Sbjct: 197 AEADESDASFLHLTPIMSVVTNIDEDHMDTYGHSVEKLHQAFIDFIHRMPFYGKAFLCID 256
Query: 295 SQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNV 354
S+ R++L ++ + Y+ TYG D YA + NV
Sbjct: 257 SEHVRAILPKVSK----PYA---------------------TYGLDDTADIYATDI-ENV 290
Query: 355 QGGSDYILCERGRPLAQ----ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLK 410
+ + + + Q + L +PG HNVLN+LA I L + S+ ++
Sbjct: 291 GAQMKFTVHVQMKGHEQGSFEVVLNMPGRHNVLNALAAIGVAL-------EVGASVEAIQ 343
Query: 411 LPLSKFMGVSRRFDLIGTIY-----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVF 465
L F GV RRF G I + DD+ HHP E+ A L AAR +P K L+ F
Sbjct: 344 KGLLGFEGVGRRFQKYGDIKLPNGGTALLVDDYGHHPVEMAATLSAARGAYPEKRLVLAF 403
Query: 466 QPHTYSRLVVLKDDFANALSEADQVVVSAV 495
QPH Y+R L +DF L+ D +V++ V
Sbjct: 404 QPHRYTRTRDLFEDFTKVLNTVDALVLTEV 433
>gi|256832307|ref|YP_003161034.1| UDP-N-acetylmuramate--L-alanine ligase [Jonesia denitrificans DSM
20603]
gi|256685838|gb|ACV08731.1| UDP-N-acetylmuramate/alanine ligase [Jonesia denitrificans DSM
20603]
Length = 492
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 150/438 (34%), Positives = 222/438 (50%), Gaps = 60/438 (13%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+G+GG+G+S +A + G VSGSD+ S+ + L +AG ++I H D
Sbjct: 14 LHFIGVGGAGMSVIAHMCHAAGARVSGSDMRASATVTALQDAGVTVNIPH--------DA 65
Query: 138 SRFPN--AVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
SR N VV SSAI DNVE++ A+ +G+ + R LA L ++ IAV+G+HGK+TT
Sbjct: 66 SRVSNEHTVVVSSAIRDDNVELVRAREMGLTVLHRSQALAMLMNDHDGIAVAGAHGKTTT 125
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSI---FYGGGKNFVLEADEYDGCFLGLSPSV 252
+ M+A +A+G D + VG+ + + P+G+I G GK + EADE DG FL P++
Sbjct: 126 SGMIAVAAQALGMDPSFAVGSTM-RTPNGAIPGGHLGHGKILIAEADESDGSFLNYRPTI 184
Query: 253 AVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
+VVTN++ +H+D + EDA F F Q+ G L+ C D A +L + +Q
Sbjct: 185 SVVTNIEPDHLDHYGSEDAFYRAFDEFADQVVPHGWLIACADDAGAYALAHRQEQ----- 239
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQ- 371
H +++TYG D P G S + R L +
Sbjct: 240 -----------------HGRQVLTYGRHPSADIRVLESHPQHPGISQVMTVTVPRNLPRT 282
Query: 372 ----------------ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSK 415
I L +PG HN LN+ A +ATV+ L +++ + LS
Sbjct: 283 GTRNTTNPENATTTLTIQLAVPGEHNALNAAAALATVMVLGASPQEAAHA-------LSA 335
Query: 416 FMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVV 475
FMG RRF+L + + DD+AHHPTEV A L AA ++A+FQPH YSR
Sbjct: 336 FMGTGRRFELRAVVGDVTVVDDYAHHPTEVAAFLSAASNVAGTGRVLALFQPHLYSRTRT 395
Query: 476 LKDDFANALSEADQVVVS 493
++FA AL AD +V+
Sbjct: 396 FANEFATALQGADVAIVT 413
>gi|350545037|ref|ZP_08914552.1| UDP-N-acetylmuramate--alanine ligase [Candidatus Burkholderia
kirkii UZHbot1]
gi|350527179|emb|CCD38732.1| UDP-N-acetylmuramate--alanine ligase [Candidatus Burkholderia
kirkii UZHbot1]
Length = 464
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 150/426 (35%), Positives = 211/426 (49%), Gaps = 49/426 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ L G+ VSGSDL ++ E L GA + IGH NI+G
Sbjct: 8 IHFVGIGGAGMSGIAEVLLNLGYHVSGSDLANNAVTERLKALGARVAIGHHEQNIEG--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
NAVV S+A+ DN E+L A+ VPI R LA+L IA++G+HGK+TT S
Sbjct: 65 ---ANAVVVSTAVRSDNPEVLAARHRRVPIVPRAVMLAELMRLKQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL A G D T ++G + + G G V EADE D FL L P + VVTN
Sbjct: 122 LVASVLAAGGLDPTFVIGGRL-NSAGANARLGTGDFIVAEADESDASFLNLFPVIEVVTN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D +K F F ++ G V+C D R +L + +
Sbjct: 181 IDADHMDTYGHDFARLKQAFIEFTHRLPFYGIAVLCVDDPNVREILPFVSK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
II YG + + A +V G + P I L +
Sbjct: 232 ----------------PIIRYGLGAEAEVRAVNVEAR-NGRMHFTTLRADAPSLDIVLNL 274
Query: 377 PGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH-- 433
PG HNV N+LA IA L + D A ++ L++F GV RRF G +
Sbjct: 275 PGTHNVQNALAAIAIATELEVAD--------ADIQRALAEFNGVGRRFQRYGEVNASSGE 326
Query: 434 ----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
+ DD+ HHP E+ A + AAR FP++ L+ FQPH Y+R +DF LS D
Sbjct: 327 GAYTLIDDYGHHPVEMAATIAAARGAFPDRRLVLAFQPHRYTRTRDCFEDFVKVLSTVDA 386
Query: 490 VVVSAV 495
+V++ V
Sbjct: 387 LVLTDV 392
>gi|283458376|ref|YP_003363000.1| UDP-N-acetylmuramate-alanine ligase [Rothia mucilaginosa DY-18]
gi|283134415|dbj|BAI65180.1| UDP-N-acetylmuramate-alanine ligase [Rothia mucilaginosa DY-18]
Length = 499
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 143/431 (33%), Positives = 216/431 (50%), Gaps = 61/431 (14%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G +HF+GIGG+G+SA+A L L+ G VSGSD S+ +E L AGA + + NI
Sbjct: 29 GRVHFIGIGGAGMSAIAALMLQAGVTVSGSDRAESAAVESLRAAGARVGVPQQAENIVDV 88
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D VV S+AI +DN E++ A++ G+ + R LA + + ++AV+G+HGKSTT
Sbjct: 89 D------TVVISTAIREDNPELVAARAQGLRVLHRSEALAAVMGESQVVAVAGTHGKSTT 142
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN-----------FVLEADEYDGC 244
+SM++ + +G P F G++ G G N FV EADE DG
Sbjct: 143 SSMISVMFDQLGAQ---------PSFAVGTVIAGRGMNAHLGAQGPGSIFVAEADESDGS 193
Query: 245 FLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 304
F+ P++AVVTN++ +H+D +E ++ V F RF+ + G +V C D A L +
Sbjct: 194 FVRYRPAIAVVTNVEPDHLDFYETDERVFEAFNRFVGSLAPNGVVVTCADDAGAADLAAR 253
Query: 305 IKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYIL-- 362
+ + GV ++TYG S+ D + S ++
Sbjct: 254 SR-------AAGV---------------PVVTYGESADADLRISEITSAGSSSSSHLSWS 291
Query: 363 --CE--RGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
C R ++L++PG+HN LN+ A A+ L S A + L++F+G
Sbjct: 292 FECHGVRYEGEQDLALKVPGIHNQLNASAAFASALI-------SGYEAADIARALAEFVG 344
Query: 419 VSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKD 478
RRF L G + G ++DD+AHHPTEV L+ R L +FQPH +SR
Sbjct: 345 ADRRFTLRGEVAGVKVFDDYAHHPTEVFRALETGRTVADGHNLYVIFQPHLFSRTREFAK 404
Query: 479 DFANALSEADQ 489
+FA ALS AD+
Sbjct: 405 EFAQALSMADR 415
>gi|397668287|ref|YP_006509824.1| UDP-N-acetylmuramate:L-alanine ligase [Legionella pneumophila
subsp. pneumophila]
gi|395131698|emb|CCD09991.1| UDP-N-acetylmuramate:L-alanine ligase [Legionella pneumophila
subsp. pneumophila]
Length = 458
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 141/426 (33%), Positives = 223/426 (52%), Gaps = 48/426 (11%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG+G+ +A++ QG+ ++GSDL S ++ L G ++IGH + NI+
Sbjct: 3 RVEQIHFVGIGGAGMCGIAEVLHNQGYRITGSDLGESGTVQRLRSLGIQVYIGHRLENIK 62
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
G D VV SSA+ +N EI+ A+ + +P+ R LA+L + IA++G+HGK+
Sbjct: 63 GAD------VVVRSSAVDFNNPEIVAARELMIPVIPRAAMLAELMRFRHGIAIAGTHGKT 116
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S+++ +L G D + ++G + + G FV+EADE D FL L P +A
Sbjct: 117 TTTSLVSSLLAEGGLDPSFVIGGKLNSCGANAQL-GKSAYFVVEADESDASFLFLKPMMA 175
Query: 254 VVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
VVTN+D +H+D +E D + +++ F FL + G V+C + + +L I++ T
Sbjct: 176 VVTNIDADHMDTYEGDFEKLRTTFLEFLHHLPFYGLAVVCLEDEEICRILPAIQRPT--- 232
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQI 372
+TYGF + + ++ +G + R P Q+
Sbjct: 233 ----------------------LTYGFK--EEAHYRAINWTQKGMLSEFVVVRPAPHKQL 268
Query: 373 SLQI--PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
++Q PG HNVLN+LA IA L D +SI L KF GV RRF ++G
Sbjct: 269 TIQFQYPGRHNVLNALASIAIATELGVDD----DSIV---RGLQKFQGVGRRFQMLGEKQ 321
Query: 431 ----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
I DD+ HHP E+ + + A R+ +P + L+ VFQPH Y+R L F + LS
Sbjct: 322 FEKGAAIIVDDYGHHPQEILSTIDAFRRVWPERRLVHVFQPHRYTRTQSLHRQFVDVLSL 381
Query: 487 ADQVVV 492
+D++++
Sbjct: 382 SDELLL 387
>gi|416216642|ref|ZP_11623871.1| UDP-N-acetylmuramate--L-alanine ligase [Moraxella catarrhalis 7169]
gi|326561546|gb|EGE11889.1| UDP-N-acetylmuramate--L-alanine ligase [Moraxella catarrhalis 7169]
Length = 486
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 141/422 (33%), Positives = 218/422 (51%), Gaps = 47/422 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+ +A++ QG+ V+GSD+ ++ E L +++GH SNI
Sbjct: 26 IHFVGIGGAGMCGIAEVLANQGYVVTGSDIKANAMTERLENLDVTVYVGHDASNI----- 80
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ + VV SSAI + N EI A +P+ +R L +L + IAV+G+HGK+TT S
Sbjct: 81 -KMADVVVVSSAIDRQNPEIQAALKAHIPVVRRADMLGELMRYRHGIAVAGAHGKTTTTS 139
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+L +L G D T ++G + + G + V EADE D FL L P VVTN
Sbjct: 140 LLTMMLTEAGLDPTYVIGGKLNASGKNAAL-GASRYLVAEADESDASFLSLRPMACVVTN 198
Query: 258 LDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H++ +E D +K + +FL + G V+CGD + +++D I +
Sbjct: 199 IDEDHMETYEGSFDKLKQAYVQFLHNMPFYGLAVLCGDDKELYAMIDDIAR--------- 249
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+ITYG ND A V + +L + +PL I+L I
Sbjct: 250 ----------------PVITYGLEKHNDVQAVDVIADGTKTHFTVLRKDKKPLP-ITLNI 292
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH--- 433
PG+HNV N+L I T+ D+ S ++I + KF GV RRF+ G+
Sbjct: 293 PGIHNVYNALGAI----TMATDEGVSDKAIC---QAVEKFAGVGRRFENNGSYPLTDGSG 345
Query: 434 ---IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHPTE+ ++AARQ +P++ L+ +FQPH YSR +F N LS+ D++
Sbjct: 346 DVVLIDDYGHHPTEIAMTIKAARQSYPDRRLVMMFQPHRYSRTRDCFSEFVNVLSQVDKL 405
Query: 491 VV 492
++
Sbjct: 406 IL 407
>gi|269127135|ref|YP_003300505.1| UDP-N-acetylmuramate/alanine ligase [Thermomonospora curvata DSM
43183]
gi|268312093|gb|ACY98467.1| UDP-N-acetylmuramate/alanine ligase [Thermomonospora curvata DSM
43183]
Length = 471
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 204/421 (48%), Gaps = 48/421 (11%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
HF+ IGG+G+S +A++ L++G VSGSD S + L E GA + +GHS ++ D
Sbjct: 20 HFIAIGGAGMSGIARIMLRRGITVSGSDAKDSPILAQLAELGAEVFVGHSAEHLGDAD-- 77
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
VV S+AI + N E+ A+ G+ + R LA L +AV+G+HGK+TT SM
Sbjct: 78 ----TVVVSTAIRESNPELRAARERGLRVLHRSEALAALMAGRRAVAVAGTHGKTTTTSM 133
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
L VL+ G D +G + G+ G G FV EADE DG FL SP +AVVTN+
Sbjct: 134 LTVVLQHAGLDPAYCIGGQLVTTGLGAD-DGTGDVFVAEADESDGSFLRYSPHIAVVTNV 192
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVV 318
+ +H+D + + VK F RF+++I GG LV D A L ++
Sbjct: 193 EADHLDNYGAFEKVKENFARFVERIEPGGALVASADDPVAGELAGAARE----------- 241
Query: 319 SNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPG 378
++TYG S+ D P G I L +++L++PG
Sbjct: 242 -----------RGLTVVTYGESAGADLRLTGFTPRGLGSRFAI-----EGLGELTLEVPG 285
Query: 379 VHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDF 438
H N+ A +A L D A ++ L+ F G RR + G G ++D +
Sbjct: 286 RHYAHNATAALAVARLLGCD-------FATIRDGLASFTGSMRRLERKGEAGGVQVFDSY 338
Query: 439 AHHPTEVRAVLQAARQRFPNKA-------LIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
AHHPTE+ A LQA R+ A ++AVFQPH YSR +F AL AD V
Sbjct: 339 AHHPTELTADLQATREYLDQLAAEGRTGRIVAVFQPHLYSRTRFFATEFGRALGLADVAV 398
Query: 492 V 492
V
Sbjct: 399 V 399
>gi|348590585|ref|YP_004875047.1| UDP-N-acetylmuramate--L-alanine ligase [Taylorella asinigenitalis
MCE3]
gi|347974489|gb|AEP37024.1| UDP-N-acetylmuramate--alanine ligase [Taylorella asinigenitalis
MCE3]
Length = 472
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 153/437 (35%), Positives = 232/437 (53%), Gaps = 51/437 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K++ +HFVGIGGSG+S +A++ L G+++SGSDL SS + L + GA ++ GHS
Sbjct: 1 MKHKIKHLHFVGIGGSGMSGIAEVLLNLGYKISGSDLSLSSTTDRLEKLGATIYEGHSAD 60
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N+ G D A+V S+A+ Q N E+L A+++ +P+ R LA+L + IAV+G+H
Sbjct: 61 NLNGAD------AIVVSTAVSQGNPEVLKARALRIPVVPRAIMLAELMRLKSGIAVAGTH 114
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S++A VL G D T ++G + + G G V+EADE D FL L P
Sbjct: 115 GKTTTTSLVASVLATGGFDPTFVIGGRL-NSAGANAKLGTGDYIVVEADESDASFLYLLP 173
Query: 251 SVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
+A++TN+D +H+D + D ++ F F +++ G ++C D + RS+L I
Sbjct: 174 IIAIITNIDADHMDTYAHDVAKLRGAFVEFSQRLPFYGSAIVCTDDENVRSILPFIS--- 230
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPN-VQGGSDYILCERGRP 368
I TYGF+ ++ A +V N + + + +G+
Sbjct: 231 ----------------------CSITTYGFNEEANFRAINVKNNGTRMEFEVLRTYQGKT 268
Query: 369 LAQ--ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
L Q +SL IPG HNVLN+LA IA V T +G E LS+F GVSRRF I
Sbjct: 269 LPQLHVSLNIPGKHNVLNALAAIA-VGTEVGVADSDIEK------ALSEFNGVSRRFTQI 321
Query: 427 GTIY--------GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKD 478
G + DD+ HHP E+ A + AAR +P++ L+ FQPH Y+R +
Sbjct: 322 GDFEVPEKNGGGKFTVIDDYGHHPVEMEATIAAARGAWPDRRLVFAFQPHRYTRTRDCFE 381
Query: 479 DFANALSEADQVVVSAV 495
DF L + D +V++ V
Sbjct: 382 DFVKVLCKTDVLVLAEV 398
>gi|332187087|ref|ZP_08388827.1| UDP-N-acetylmuramate--alanine ligase [Sphingomonas sp. S17]
gi|332012787|gb|EGI54852.1| UDP-N-acetylmuramate--alanine ligase [Sphingomonas sp. S17]
Length = 471
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 152/429 (35%), Positives = 228/429 (53%), Gaps = 49/429 (11%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G+ V GSD+ ++GL E G + IGH N+
Sbjct: 9 GTIHFVGIGGIGMSGIAEVMKNLGYRVQGSDVAEGYVVQGLREKGIAVAIGHGADNL--G 66
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D + VV S+AI + N E+ A +P+ +R LA+L + +AV+G+HGK+TT
Sbjct: 67 DAA----VVVTSTAITRSNPEVEAALERRIPVVRRAEMLAELMRLKSTVAVAGTHGKTTT 122
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L A G D T I G + + + G V+EADE DG FL L ++AVV
Sbjct: 123 TSMVAALLDAGGVDPTVINGGIINSYGSNARL-GASDWMVVEADESDGSFLRLDGTIAVV 181
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D + D VK F F++ + G ++C D +++L +++
Sbjct: 182 TNIDPEHLDHYGSFDRVKDAFVEFVENVPFYGAALLCLDHPEVQNILPRVR--------- 232
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDY--ILCER---GRPLA 370
D +++TYGFS+ D +V P + GG+ + I+ R R +
Sbjct: 233 ---------------DRRVVTYGFSAQADVRGVNVTP-IPGGNRFEAIIRHRDGSSRSIE 276
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
I L +PG HNV N+LA I L L D A ++ +F GV RRF +G I
Sbjct: 277 GIELPMPGRHNVQNALAAIGVALELGIDD-------ATIQQGFGQFGGVKRRFTKVGEIA 329
Query: 431 ----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
+ DD+ HHP E+RAVL AAR+ + +IAV QPH ++RL L ++F A ++
Sbjct: 330 VDGGVATVIDDYGHHPVEIRAVLAAAREGARGR-VIAVVQPHRFTRLGNLMEEFQTAFND 388
Query: 487 ADQVVVSAV 495
AD+V+V+ V
Sbjct: 389 ADRVLVTPV 397
>gi|85373187|ref|YP_457249.1| UDP-N-acetylmuramate--L-alanine ligase [Erythrobacter litoralis
HTCC2594]
gi|122545203|sp|Q2NCY9.1|MURC_ERYLH RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|84786270|gb|ABC62452.1| UDP-N-acetylmuramate-alanine ligase [Erythrobacter litoralis
HTCC2594]
Length = 474
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 151/430 (35%), Positives = 225/430 (52%), Gaps = 50/430 (11%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G++V GSDL +E L G + IGH+ NI+
Sbjct: 9 GVIHFVGIGGIGMSGIAEVMHNLGYQVQGSDLAEGPSVERLRGRGIQVMIGHAPENIEN- 67
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
VV S+A+ + N E+ A +P+ +R LA+L + +AV+G+HGK+TT
Sbjct: 68 -----AAVVVTSTAVKRTNPEVASALENRIPVVRRAEMLAELMRLKSTVAVAGTHGKTTT 122
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L D T I G + Q+ + G + V+EADE DG FL L ++AVV
Sbjct: 123 TSMIAALLDCGDIDPTVINGGIIEQYGSNARL-GDSEWMVVEADESDGSFLRLDGTIAVV 181
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D + D D VK F F+ + G ++C D ++++ Q++
Sbjct: 182 TNIDPEHLDHYGDFDGVKRAFLDFIHNVPFYGAAILCIDHPEVQAVIGQVR--------- 232
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS---DYILCERG---RPL 369
D +++TYGFS D ++ P +GG D I+ +RG R +
Sbjct: 233 ---------------DRRVMTYGFSLQADICGVNIRP--EGGGNVFDVIVRQRGEEDRRI 275
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
A + L +PG HNV N+LA IA + + S ++ F GV RRF +G +
Sbjct: 276 ADVHLPMPGRHNVQNALAAIAVSIEM-------GCSDEVIQRGFESFGGVRRRFTKVGEV 328
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNK----ALIAVFQPHTYSRLVVLKDDFANALS 485
G I DD+ HHP E+ AVL AA++ + +IAV QPH Y+RL L DDF + +
Sbjct: 329 GGATIIDDYGHHPVEIAAVLGAAQEAVSSSDKGGRVIAVAQPHRYTRLRDLMDDFQSCFN 388
Query: 486 EADQVVVSAV 495
+AD V V+ V
Sbjct: 389 DADAVYVTPV 398
>gi|397665204|ref|YP_006506742.1| UDP-N-acetylmuramate:L-alanine ligase [Legionella pneumophila
subsp. pneumophila]
gi|395128615|emb|CCD06833.1| UDP-N-acetylmuramate:L-alanine ligase [Legionella pneumophila
subsp. pneumophila]
Length = 469
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 141/436 (32%), Positives = 227/436 (52%), Gaps = 48/436 (11%)
Query: 64 NEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANL 123
+E+ + R IHFVGIGG+G+ +A++ QG+ ++GSDL S ++ L G +
Sbjct: 4 SEQFLSPRMGRVEQIHFVGIGGAGMCGIAEVLHNQGYRITGSDLGESGTVQRLRSLGIQV 63
Query: 124 HIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL 183
+IGH + NI+G D VV SSA+ +N EI+ A+ + +P+ R LA+L +
Sbjct: 64 YIGHRLENIKGAD------VVVRSSAVDFNNPEIVAARELMIPVIPRAAMLAELMRFRHG 117
Query: 184 IAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDG 243
IA++G+HGK+TT S+++ +L G D + ++G + + G FV+EADE D
Sbjct: 118 IAIAGTHGKTTTTSLVSSLLAEGGLDPSFVIGGKLNSCGANAQL-GKSAYFVVEADESDA 176
Query: 244 CFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLL 302
FL L P +AVVTN+D +H+D +E D + +++ F FL + G V+C + + +L
Sbjct: 177 SFLFLKPMMAVVTNIDADHMDTYEGDFEKLRTTFLEFLHHLPFYGLAVVCLEDEEICRIL 236
Query: 303 DQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYIL 362
+++ T +TYGF + + ++ +G +
Sbjct: 237 PAVQRPT-------------------------LTYGFK--EEAHYRAINWTQKGMLSEFV 269
Query: 363 CERGRPLAQISLQI--PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVS 420
R P Q+++Q PG HNVLN+LA IA L D +SI L KF GV
Sbjct: 270 VVRPAPHKQLTIQFQYPGRHNVLNALASIAIATELGVDD----DSIV---RGLQKFQGVG 322
Query: 421 RRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVL 476
RRF ++G I DD+ HHP E+ + + A R+ +P + L+ VFQPH Y+R L
Sbjct: 323 RRFQMLGEKQFEKGAAIIVDDYGHHPQEILSTIDAFRRVWPERRLVHVFQPHRYTRTQSL 382
Query: 477 KDDFANALSEADQVVV 492
F + LS +D++++
Sbjct: 383 HRQFVDVLSLSDELLL 398
>gi|359424855|ref|ZP_09215961.1| UDP-N-acetylmuramate--L-alanine ligase [Gordonia amarae NBRC 15530]
gi|358239757|dbj|GAB05543.1| UDP-N-acetylmuramate--L-alanine ligase [Gordonia amarae NBRC 15530]
Length = 517
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 152/435 (34%), Positives = 218/435 (50%), Gaps = 40/435 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H VGIGG+G+S LA++ L +G +VSGSD S + GL GA + IGH S + G
Sbjct: 21 VHMVGIGGAGMSGLARILLARGGQVSGSDAKNSRAILGLRTRGARVQIGHDQSALDQLPG 80
Query: 138 SRFPNAVVAS-SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
P AVV + +AIP+ N E++ A+S G+P+ R LA+L + + ++G+HGK++T
Sbjct: 81 G--PTAVVTTYAAIPKTNPELVAARSRGIPVLLRPVVLAELMAGFRTLLIAGTHGKTSTT 138
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM L+ G D + VG + + + +G G FV EADE DG L P V VVT
Sbjct: 139 SMSVVALQHCGLDPSFAVGGELNES-GTNAHHGTGAVFVAEADESDGSLLEYRPDVVVVT 197
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGD---SQCARSLLDQIKQDTGLKY 313
N++ +H+D F +A +F RF + I G L++C D S + G++
Sbjct: 198 NIEADHLDHFGTREAYVEVFDRFAECIVDNGTLIVCLDDPGSAALAGRCAAALAERGVEV 257
Query: 314 SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYI-LCER---GRP- 368
G +G+G + + G N + P V GG + +R G P
Sbjct: 258 IG----------YGEG-THADLAPGVP--NVAMLQRYTPRVAGGEAQVRFADRITDGEPE 304
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
+++ +PG H LN + + + G E +A F GV RRF+L G
Sbjct: 305 TVPVTVTLPGKHMALNGIGAVLGCVRAGGGLSAVLEGVA-------SFSGVHRRFELRGV 357
Query: 429 IYGCHIYDDFAHHPTEVRAVLQAARQRF--------PNKALIAVFQPHTYSRLVVLKDDF 480
+ DD+AHHPTEVRAVL AAR P +IAVFQPH YSR V +F
Sbjct: 358 AGEVAVVDDYAHHPTEVRAVLTAARDVVTAAAGADRPAGRVIAVFQPHLYSRTVEFATEF 417
Query: 481 ANALSEADQVVVSAV 495
A AL AD+V V+ V
Sbjct: 418 AGALDLADEVFVADV 432
>gi|336323926|ref|YP_004603893.1| UDP-N-acetylmuramate--L-alanine ligase [Flexistipes sinusarabici
DSM 4947]
gi|336107507|gb|AEI15325.1| UDP-N-acetylmuramate--L-alanine ligase [Flexistipes sinusarabici
DSM 4947]
Length = 458
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 147/421 (34%), Positives = 214/421 (50%), Gaps = 46/421 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+S +A++ GF V+GSD +S +E L G + GHS N+ G D
Sbjct: 8 IHFVGIGGIGMSGIAEVLHNLGFIVTGSDTARNSTVERLSNLGIEVIQGHSADNVGGAD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSA+ DN E++ AK +P+ KR LA+L I V+GSHGK+TT S
Sbjct: 67 -----LVVYSSAVRLDNPELVRAKDNYIPVIKRAEMLAELMRMKYSIVVAGSHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+ +L D T ++G + + + ++ G + V EADE D FL L P+V+V+TN
Sbjct: 122 MIGEILYYADFDPTVVIGGRLNRDYNNALV-GKSEFMVSEADESDRSFLMLYPTVSVITN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D EH+D +ED D +K+ F RF ++ G +IC D ++ I++
Sbjct: 181 IDLEHLDAYEDMDDLKNAFIRFANKVPFYGVNIICIDDLNVTDIIPYIEK---------- 230
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE---RGRPLAQISL 374
+ TYG S+ A+ C +++ + E G + ++ L
Sbjct: 231 ---------------RFTTYGLSA----KADVSCYDIKRTGFSVSFEVLLHGEKIGRVKL 271
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHI 434
+PG HNVLN+LA IA L +K L F GV RR L +
Sbjct: 272 ALPGEHNVLNALASIAVGFEL-------EIPFDRIKKGLENFQGVQRRLTLRLDSDNVKV 324
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSA 494
DD+ HHPTE+ L+A R+ FPN ++AVFQPH YSR L DFA +AD++ V+
Sbjct: 325 IDDYGHHPTEISTTLRAVREAFPNYRVVAVFQPHRYSRTSALMTDFAKCFFDADELYVTD 384
Query: 495 V 495
+
Sbjct: 385 I 385
>gi|238650471|ref|YP_002916323.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia peacockii str.
Rustic]
gi|259509781|sp|C4K124.1|MURC_RICPU RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|238624569|gb|ACR47275.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia peacockii str.
Rustic]
Length = 485
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 142/427 (33%), Positives = 215/427 (50%), Gaps = 48/427 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG G+S +A++ G++V GSDLV + + L G + +GH+ NI
Sbjct: 16 IHFIGIGGVGMSGIAEILYNLGYKVQGSDLVENYNTKRLESYGIKIFLGHAEQNITN--- 72
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ VV SSAI N EI A +PI +R LA+L +AVSGSHGK+TT S
Sbjct: 73 ---VSYVVISSAINPKNPEIKEALERKIPIIRRADMLAELMRLKCSVAVSGSHGKTTTTS 129
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVT 256
++A + +A G T I G + + Y G N+++ EADE D F+ + ++A++T
Sbjct: 130 LVACLFEAAGLCPTVINGGIINNKLTNA--YLGSSNYLIAEADESDATFIHIPSTIAIIT 187
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY--- 313
N+D EH+D + D + + FR F+ + G V C D + R L+D+I + + Y
Sbjct: 188 NIDPEHLDYYRDFETLIGAFRSFITNLPFYGFAVCCIDHKIVRKLVDEITERKIVTYGID 247
Query: 314 ---SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
+ + N ++D+ D KI PNV G + +
Sbjct: 248 SEDAHIIAFNINTDIASSTFDVKI---------------SLPNVLGTT---------IIE 283
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+I++ PG HN+LNSLA IA + L I +K + F GV RRF +
Sbjct: 284 KITIPTPGRHNILNSLAAIAVGIEL-------DFGIKAIKNGFNNFKGVKRRFTKVAEYN 336
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQ--RFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
I DD+AHHP E++A L A+ N +IA+FQPH YSR+ L DDF ++AD
Sbjct: 337 NASIIDDYAHHPEEIKATLATAKNIANKQNGKVIAIFQPHRYSRMQYLFDDFMLCFADAD 396
Query: 489 QVVVSAV 495
+ ++ +
Sbjct: 397 ILYITDI 403
>gi|337741932|ref|YP_004633660.1| UDP-N-acetylmuramate--L-alanine ligase MurC [Oligotropha
carboxidovorans OM5]
gi|386030948|ref|YP_005951723.1| UDP-N-acetylmuramate--L-alanine ligase MurC [Oligotropha
carboxidovorans OM4]
gi|336096016|gb|AEI03842.1| UDP-N-acetylmuramate--L-alanine ligase MurC [Oligotropha
carboxidovorans OM4]
gi|336099596|gb|AEI07419.1| UDP-N-acetylmuramate--L-alanine ligase MurC [Oligotropha
carboxidovorans OM5]
Length = 467
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 151/429 (35%), Positives = 227/429 (52%), Gaps = 52/429 (12%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G+ V GSD+ ++ + L G + +GH N+ G
Sbjct: 8 GPIHFVGIGGIGMSGIAEVLGNLGYTVQGSDISENANVARLRGKGIKVMVGHKAENVNGA 67
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D +V S+AI +DN E++ A++ +P+ +R LA+L + IA++G+HGK+TT
Sbjct: 68 D------VLVVSTAIKRDNPELMAARAQRIPVVRRAEMLAELMRLKSCIAIAGTHGKTTT 121
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L A D T I G + + + G G+ V+EADE DG FL L VA+V
Sbjct: 122 TSMVATLLDAGALDPTVINGGIINAYGTNARL-GEGEWMVVEADESDGTFLKLPVDVAIV 180
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D F+ +AV+ FR F++ + G V+C D ++L+ +I+
Sbjct: 181 TNVDPEHLDHFKTFEAVQDAFRHFVEGVPFYGFAVMCIDHAVVQALVGRIE--------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP------L 369
D +IITYG + D + P GGS + + R R +
Sbjct: 232 ---------------DRRIITYGENPQADARLVDLQP-FPGGSKFKVEVRHRKAGAAHVI 275
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHE---SIACLKLPLSKFMGVSRRFDLI 426
A + L +PG HN LN+ A IA +HE S ++ L+ F GV RRF
Sbjct: 276 ADLVLPMPGRHNALNATAAIAV----------AHEIGMSDEAIRKALAGFGGVKRRFTRT 325
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G G + DD+ HHP E+ AVL+AAR + +IAV QPH +SRL L ++F ++
Sbjct: 326 GEWNGVTVIDDYGHHPVEIAAVLKAARDTATGR-VIAVVQPHRFSRLHTLFEEFCTCFND 384
Query: 487 ADQVVVSAV 495
AD V+V+ V
Sbjct: 385 ADTVIVADV 393
>gi|312795062|ref|YP_004027984.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia rhizoxinica
HKI 454]
gi|312166837|emb|CBW73840.1| UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) [Burkholderia
rhizoxinica HKI 454]
Length = 487
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 152/427 (35%), Positives = 217/427 (50%), Gaps = 52/427 (12%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ + G++VSGSDL S + L GA++ GH +I G D
Sbjct: 32 IHFVGIGGAGMSGIAEVLVNLGYQVSGSDLSRSVVTDRLSGLGAHIMFGHDARHIDGAD- 90
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
AVV S+A+ DN E+L A+ +PI R LA+L IA++G+HGK+TT S
Sbjct: 91 -----AVVISTAVHADNPEVLEARRRHIPIVPRAVMLAELMRLKQGIAIAGTHGKTTTTS 145
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL A G D T ++G + + G G V EADE D FL L P + V+TN
Sbjct: 146 LVASVLAAGGLDPTFVIGGRLIS-AGANARLGTGDFIVAEADESDASFLNLFPVIEVITN 204
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D +K F F ++ G V+C D R +L + +
Sbjct: 205 IDADHMDTYGHDFARLKQAFIEFTHRLPFYGIAVLCVDDPNVREILPFVSK--------- 255
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER--GRPLAQISL 374
II YGF+ D A VC + G + R PL I L
Sbjct: 256 ----------------PIIRYGFAQEADVRATHVC--ARDGRMHFTVHRADAAPL-DIVL 296
Query: 375 QIPGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY--- 430
+PG HNV N+LA IA L + D A ++ L++F GV RRF G +
Sbjct: 297 NLPGTHNVQNALAAIAIATELEVAD--------ADIQSALAEFNGVGRRFQRYGEVPLTR 348
Query: 431 -GCHIY-DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
G ++ DD+ HHP E+ A + AAR FP++ L+ VFQPH Y+R +DF LS D
Sbjct: 349 GGAYLLIDDYGHHPVEMAATIAAARGAFPDRRLVLVFQPHRYTRTRDCFEDFVKVLSTVD 408
Query: 489 QVVVSAV 495
+V++ V
Sbjct: 409 ALVLTEV 415
>gi|34580726|ref|ZP_00142206.1| UDP-N-acetylmuramate--alanine ligase [Rickettsia sibirica 246]
gi|28262111|gb|EAA25615.1| UDP-N-acetylmuramate--alanine ligase [Rickettsia sibirica 246]
Length = 485
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 142/427 (33%), Positives = 214/427 (50%), Gaps = 48/427 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG G+S +A++ G++V GSDLV + + L G + +GH+ NI
Sbjct: 16 IHFIGIGGVGMSGIAEILYNLGYKVQGSDLVENYNTKRLESYGIKIFLGHAEQNITN--- 72
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ VV SSAI N EI A +PI +R LA+L +AVSGSHGK+TT S
Sbjct: 73 ---VSYVVISSAINPKNPEIKEALERKIPIIRRADMLAELMRLKCSVAVSGSHGKTTTTS 129
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVT 256
++A + +A G T I G + + Y G N+++ EADE D F+ + ++A++T
Sbjct: 130 LVACLFEAAGLCPTVINGGIINNKSTNA--YLGSSNYLIAEADESDATFIHIPSTIAIIT 187
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY--- 313
N+D EH+D + D + + FR F+ + G V C D + R L+D I + + Y
Sbjct: 188 NIDPEHLDYYRDFETLIGAFRSFITNLPFYGFAVCCIDHKIVRKLVDDITERKIVTYGID 247
Query: 314 ---SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
+ + N ++D+ D KI PNV G + +
Sbjct: 248 SEDAHIIAFNINTDIASSTFDVKI---------------SLPNVLGTT---------IIE 283
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+I++ PG HN+LNSLA IA + L I +K + F GV RRF +
Sbjct: 284 KITIPTPGRHNILNSLAAIAVGIEL-------DFGIKAIKNGFNNFKGVKRRFTKVAEYN 336
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQ--RFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
I DD+AHHP E++A L A+ N +IA+FQPH YSR+ L DDF ++AD
Sbjct: 337 NASIIDDYAHHPEEIKATLATAKNIANKQNGKVIAIFQPHRYSRMQYLFDDFMFCFADAD 396
Query: 489 QVVVSAV 495
+ ++ +
Sbjct: 397 ILYITDI 403
>gi|332527086|ref|ZP_08403166.1| UDP-N-acetylmuramate--L-alanine ligase [Rubrivivax benzoatilyticus
JA2]
gi|332111517|gb|EGJ11499.1| UDP-N-acetylmuramate--L-alanine ligase [Rubrivivax benzoatilyticus
JA2]
Length = 473
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 144/438 (32%), Positives = 221/438 (50%), Gaps = 53/438 (12%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K+ IHFVG+GG+G+S +A++ G+ V+GSD S+ E L G + IGH +
Sbjct: 1 MKHAVKQIHFVGVGGAGMSGIAEILHNLGYRVTGSDQAASATTERLAALGLRIAIGHDAA 60
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
NI+G D AVV S+A+ DN E++ A++ +P+ R LA+L IA++G+H
Sbjct: 61 NIEGAD------AVVISTAVKGDNPEVITARARRIPVVPRAVMLAELMRLRRGIAIAGTH 114
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S++A VL G D T ++G + S G G+ V+EADE D FL L P
Sbjct: 115 GKTTTTSLVASVLAEAGRDPTFVIGGKLLSAGANSRL-GSGEYIVVEADESDASFLNLMP 173
Query: 251 SVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
+AVVTN+D +H++ + D ++S F F+ ++ G ++CGD R+++ + +
Sbjct: 174 IMAVVTNIDADHMETYGHDLSRLRSAFVDFIHRMPFYGAAIVCGDDPGVRAIMPMLSRP- 232
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER---- 365
VVS +G G D ++ + GG +R
Sbjct: 233 -------VVS------YGLGEDVQVRAVDVEAL------------PGGRMRFTAQRRNGV 267
Query: 366 GRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
P I+L +PGVHNV N+LA IA + L + ++ L + F GV RRF
Sbjct: 268 ALPDLSITLNLPGVHNVCNALAAIAVAMEL---ELPDEPTVRAL----AGFTGVGRRFQR 320
Query: 426 IGTIY--------GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLK 477
G + + DD+ HHP E+ AV+ AAR FP + L+ FQPH Y+R
Sbjct: 321 WGELPVSAARGGGSFTLIDDYGHHPAEMAAVVAAARGAFPGRRLVLAFQPHRYTRTRDCF 380
Query: 478 DDFANALSEADQVVVSAV 495
+DF + AD V+++ V
Sbjct: 381 EDFVKVMGSADAVLLTEV 398
>gi|209884384|ref|YP_002288241.1| UDP-N-acetylmuramate--L-alanine ligase [Oligotropha carboxidovorans
OM5]
gi|209872580|gb|ACI92376.1| UDP-N-acetylmuramate--alanine ligase [Oligotropha carboxidovorans
OM5]
Length = 482
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 155/438 (35%), Positives = 232/438 (52%), Gaps = 46/438 (10%)
Query: 64 NEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANL 123
+E + G IHFVGIGG G+S +A++ G+ V GSD+ ++ + L G +
Sbjct: 11 EDESSMRLPREIGPIHFVGIGGIGMSGIAEVLGNLGYTVQGSDISENANVARLRGKGIKV 70
Query: 124 HIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL 183
+GH N+ G D +V S+AI +DN E++ A++ +P+ +R LA+L +
Sbjct: 71 MVGHKAENVNGAD------VLVVSTAIKRDNPELMAARAQRIPVVRRAEMLAELMRLKSC 124
Query: 184 IAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDG 243
IA++G+HGK+TT SM+A +L A D T I G + + + G G+ V+EADE DG
Sbjct: 125 IAIAGTHGKTTTTSMVATLLDAGALDPTVINGGIINAYGTNARL-GEGEWMVVEADESDG 183
Query: 244 CFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLD 303
FL L VA+VTN+D EH+D F+ +AV+ FR F++ + G V+C D ++L+
Sbjct: 184 TFLKLPVDVAIVTNVDPEHLDHFKTFEAVQDAFRHFVEGVPFYGFAVMCIDHAVVQALVG 243
Query: 304 QIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILC 363
+I+ D +IITYG + D + P GGS + +
Sbjct: 244 RIE------------------------DRRIITYGENPQADARLVDLQP-FPGGSKFKVE 278
Query: 364 ERGRP------LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFM 417
R R +A + L +PG HN LN+ A IA V IG S E+I + L+ F
Sbjct: 279 VRHRKAGAAHVIADLVLPMPGRHNALNATAAIA-VAHEIG---MSDEAI---RKALAGFG 331
Query: 418 GVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLK 477
GV RRF G G + DD+ HHP E+ AVL+AAR + +IAV QPH +SRL L
Sbjct: 332 GVKRRFTRTGEWNGVTVIDDYGHHPVEIAAVLKAARDTATGR-VIAVVQPHRFSRLHTLF 390
Query: 478 DDFANALSEADQVVVSAV 495
++F ++AD V+V+ V
Sbjct: 391 EEFCTCFNDADTVIVADV 408
>gi|229586496|ref|YP_002844997.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia africae ESF-5]
gi|259509780|sp|C3PMU4.1|MURC_RICAE RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|228021546|gb|ACP53254.1| UDP-N-acetylmuramate--alanine ligase [Rickettsia africae ESF-5]
Length = 485
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 142/427 (33%), Positives = 214/427 (50%), Gaps = 48/427 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG G+S +A++ G++V GSDLV + + L G + +GH+ NI
Sbjct: 16 IHFIGIGGVGMSGIAEILYNLGYKVQGSDLVENYNTKRLESYGIKIFLGHAEQNITN--- 72
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ VV SSAI N EI A +PI +R LA+L +AVSGSHGK+TT S
Sbjct: 73 ---VSYVVISSAINPKNPEIKEALERKIPIIRRADMLAELMRLKCSVAVSGSHGKTTTTS 129
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVT 256
++A + +A G T I G + + Y G N+++ EADE D F+ + ++A++T
Sbjct: 130 LVACLFEAAGLCPTVINGGIINNKSTNA--YLGSSNYLIAEADESDATFIHIPSTIAIIT 187
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY--- 313
N+D EH+D + D + + FR F+ + G V C D + R L+D I + + Y
Sbjct: 188 NIDPEHLDYYRDFETLIGAFRSFITNLPFYGFAVCCIDHKIVRKLVDDITERKIVTYGID 247
Query: 314 ---SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
+ + N ++D+ D KI PNV G + +
Sbjct: 248 SEDAHIIAFNINTDIASSTFDVKI---------------SLPNVLGTT---------IIE 283
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+I++ PG HN+LNSLA IA + L I +K + F GV RRF +
Sbjct: 284 KITIPTPGRHNILNSLAAIAVGIEL-------DFGIKAIKNGFNNFKGVKRRFTKVAEYN 336
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQ--RFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
I DD+AHHP E++A L A+ N +IA+FQPH YSR+ L DDF ++AD
Sbjct: 337 NASIIDDYAHHPEEIKATLATAKNIANKQNGKVIAIFQPHRYSRMQYLFDDFMFCFADAD 396
Query: 489 QVVVSAV 495
+ ++ +
Sbjct: 397 ILYITDI 403
>gi|78188040|ref|YP_378378.1| UDP-N-acetylmuramate--L-alanine ligase [Chlorobium chlorochromatii
CaD3]
gi|109892699|sp|Q3ANV2.1|MURC_CHLCH RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|78170239|gb|ABB27335.1| UDP-N-acetylmuramate--L-alanine ligase [Chlorobium chlorochromatii
CaD3]
Length = 467
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/420 (32%), Positives = 221/420 (52%), Gaps = 42/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H VGIGG+G+SA+A+L LK GF VSGSDL + L GA ++ GH + +D
Sbjct: 9 VHIVGIGGAGMSAIAELLLKSGFSVSGSDLSTGDVTDRLTAHGAVIYKGHQEGQVADSD- 67
Query: 138 SRFPNAVVASSAI-PQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
VV SSAI ++NVE+ A G+P+ KRD L +L + I +SG+HGK+TT
Sbjct: 68 -----VVVYSSAIRSEENVELRAALKAGIPVIKRDEMLGELMRYKSGICISGTHGKTTTT 122
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
+M+A +L G+ T ++G + + GS G GK V+EADEYD FL L+P++A++
Sbjct: 123 AMIATMLLEAGESPTVMIGG-ISDYLKGSTVVGEGKYMVIEADEYDRAFLKLTPTIAILN 181
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+L+ EH+D + + +K F F ++ G ++ C D R ++ + +
Sbjct: 182 SLESEHMDTYGTLEELKQAFITFANKVPFYGRVICCVDWAEIRKIIPSLNR--------- 232
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+ IT+G D A + ++G + + + G + + +
Sbjct: 233 ----------------RYITFGIEEPADVMATDIVL-LEGSTTFTIRAFGIEYPNVRIHV 275
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL-IGTIYGCHIY 435
PG HNVLN+LA +T L L + + C + G+ RRF + G +
Sbjct: 276 PGKHNVLNALAAFSTGLELGISPERLIAGLGC-------YSGMRRRFQVKYSGNNGLMVV 328
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHP+EV+A ++AA+ + + ++AVFQPH +SR D++ ALS AD+V ++ +
Sbjct: 329 DDYAHHPSEVKATVKAAKDGWQHSKVVAVFQPHLFSRTRDFADEYGWALSRADEVYIADI 388
>gi|284030820|ref|YP_003380751.1| UDP-N-acetylmuramate/alanine ligase [Kribbella flavida DSM 17836]
gi|283810113|gb|ADB31952.1| UDP-N-acetylmuramate/alanine ligase [Kribbella flavida DSM 17836]
Length = 479
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 150/423 (35%), Positives = 216/423 (51%), Gaps = 43/423 (10%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
+ G +HFVGIGG+G+S +A++ +G EVSGSD + L GA +GH+ ++
Sbjct: 13 EKLGRVHFVGIGGAGMSGIARIMASRGIEVSGSDAKDGKVLAALRALGATCWVGHAAEHV 72
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
D VV S+AI + N E++ A++ G+PI R LA + IAV+G+HGK
Sbjct: 73 ANAD------TVVVSTAIRETNPEVVAAQAAGIPILPRAAALASVMAGRRTIAVAGTHGK 126
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGG-GKNFVLEADEYDGCFLGLSPS 251
+TT SML L+ D + +G ++ + GS + G G FV EADE D FL P
Sbjct: 127 TTTTSMLTVALQHCAADPSYAIGGNLNE--SGSNAHDGTGDLFVAEADESDKSFLTYGPE 184
Query: 252 VAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
V++VT+++ +H+D + DE + F F ++ GG LVIC D AR L ++
Sbjct: 185 VSIVTSVEPDHLDNYGDEASYTKAFEDFCDRVLPGGFLVICVDDAGARRLAGFARE---- 240
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPN--VQGGSDYILCERGRPL 369
+G D + TYG S+ D + VQ ++ RGR L
Sbjct: 241 ----------------RGIDVR--TYGESADADLRVTEITATGAVQ---SFVPVWRGRKL 279
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
++LQ G HN LN+ A +A L L S A L L+ F G RRF+ G
Sbjct: 280 PVVNLQQAGKHNALNASAALAVGLGL-------GFSAADLAEGLASFTGTGRRFEFKGQE 332
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
G +YD +AHHPTE+ L AARQ +IA FQPH +SR + +F+ AL+ AD+
Sbjct: 333 DGVRVYDSYAHHPTELAVDLTAARQVAGEGRVIACFQPHLFSRTRIFATEFSAALALADE 392
Query: 490 VVV 492
VVV
Sbjct: 393 VVV 395
>gi|442609546|ref|ZP_21024283.1| UDP-N-acetylmuramate--alanine ligase [Pseudoalteromonas
luteoviolacea B = ATCC 29581]
gi|441749018|emb|CCQ10345.1| UDP-N-acetylmuramate--alanine ligase [Pseudoalteromonas
luteoviolacea B = ATCC 29581]
Length = 478
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 147/435 (33%), Positives = 222/435 (51%), Gaps = 67/435 (15%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG+G+ +A++ +G+ ++GSDL S+ E L++ GA + IGH +NI+
Sbjct: 12 RINTIHFVGIGGAGMGGIAEVMAVEGYRITGSDLATSAMTERLIKVGAEVFIGHHENNIR 71
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
D VV SSAI + N EI AK+ +P+ +R LA++ + IAV+G+HGK+
Sbjct: 72 DAD------VVVVSSAIDERNPEIAAAKAARIPVVRRAEMLAEIMRYRHGIAVAGTHGKT 125
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEADEYDGCF 245
TT S++A + G D P F G + G N V EADE D F
Sbjct: 126 TTTSLIASIFAEAGLD---------PTFVIGGLLNSAGTNAKLGRSHYLVAEADESDASF 176
Query: 246 LGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 304
L L P V+VVTN++ +H+D + D + +K + F+ + G V+C DS+ A L+ +
Sbjct: 177 LHLQPMVSVVTNIEADHMDTYGGDFEKMKDTYVEFIHNLPFYGLAVVCSDSEVANELIPR 236
Query: 305 IKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDY---I 361
+ +ITYG + D+ VC Q S +
Sbjct: 237 FAR-------------------------PVITYGLNPDADY---RVCDFTQSASSSEFNV 268
Query: 362 LCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSR 421
+ ++G ++ + L +PG+HN LN+ A IA + D + +I L KF GV R
Sbjct: 269 VTKQGHQMS-VKLNMPGIHNALNATAAIA----VAKDHDIAEHAILS---ALEKFAGVGR 320
Query: 422 RFDLIGTIYG----CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLK 477
RF GT + DD+ HHP+EV A +QAAR +P K L+ V+QPH YSR L
Sbjct: 321 RFQHYGTFNNEKGEVMLVDDYGHHPSEVAATIQAARAGWPEKRLVMVYQPHRYSRTRDLY 380
Query: 478 DDFANALSEADQVVV 492
+DF L++ DQ+++
Sbjct: 381 EDFVKVLADVDQLIL 395
>gi|406039090|ref|ZP_11046445.1| UDP-N-acetylmuramate--L-alanine ligase [Acinetobacter ursingii DSM
16037 = CIP 107286]
Length = 482
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 146/429 (34%), Positives = 218/429 (50%), Gaps = 49/429 (11%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG+G+ +A++ QG++VSGSD+ S+ L E G ++IGH+ NIQ
Sbjct: 21 RIKHIHFVGIGGAGMCGIAEVLKNQGYKVSGSDIKASNTTAQLEEKGIKVYIGHTADNIQ 80
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
N +V S+AI +N E+ A P+ +R L +L + IAV+G+HGK+
Sbjct: 81 N------ANVLVVSTAIDPENPEVKAAIESRTPVVRRAEMLGELMRYRHGIAVAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S+L +L D T ++G + + + G + V EADE D FL L P A
Sbjct: 135 TTTSLLTTMLAEENLDPTYVIGGLLNRTGVNAAL-GASRFIVAEADESDASFLYLEPMAA 193
Query: 254 VVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
+VTN+D +H+D + D +K F +FL ++ G V+CGD + +L +I +
Sbjct: 194 IVTNIDADHMDTYGGSFDTLKDTFVQFLHKLPFYGLAVVCGDDANIQEILPRIGR----- 248
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILCERGRPLA 370
++TYGF ND A V Q G S + + + R
Sbjct: 249 --------------------PVLTYGFGEDNDIRAVEVE---QDGMRSHFTVLRKDREPL 285
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
++++ PG+HNVLN+LA I G S A + L F GV RRF + G
Sbjct: 286 RLTINQPGLHNVLNALAAI-------GVATDEGVSDAAISRALEGFSGVGRRFQVQGEFE 338
Query: 431 ----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
+ DD+ HHP EV A ++AARQ P++ L+ +FQPH +SR DDF + LS+
Sbjct: 339 LGEGNVKLVDDYGHHPKEVEATIKAARQSHPDRRLVMMFQPHRFSRTRDCFDDFVDVLSQ 398
Query: 487 ADQVVVSAV 495
DQ+++ V
Sbjct: 399 VDQLLLLEV 407
>gi|197334581|ref|YP_002156996.1| UDP-N-acetylmuramate--L-alanine ligase [Vibrio fischeri MJ11]
gi|226706333|sp|B5FB34.1|MURC_VIBFM RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|197316071|gb|ACH65518.1| UDP-N-acetylmuramate--alanine ligase [Vibrio fischeri MJ11]
Length = 487
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 145/433 (33%), Positives = 209/433 (48%), Gaps = 63/433 (14%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHFVGIGG+G+S +A++ L +G+ +SGSD+ ++ L + GA + GH SN++
Sbjct: 21 RVECIHFVGIGGAGMSGIAEVLLNEGYHISGSDMAENTVTVRLAQKGAEIFFGHQASNVE 80
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
+ VV S+AI N EI+ AK +P+ +R LA+L + IAV+G+HGK+
Sbjct: 81 K------ASVVVVSTAIDPSNPEIVAAKENRIPVIRRAEMLAELMRYRHGIAVAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEADEYDGCF 245
TT ++ + G D P F +G + G N + EADE D F
Sbjct: 135 TTTALTTQIYSEAGLD---------PTFVNGGLVKNAGTNARLGSSRFLIAEADESDASF 185
Query: 246 LGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 304
L L P V++VTN++ +H+D + D + +K F FL + G V+C D R LL Q
Sbjct: 186 LHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAVMCVDDPVVRELLPQ 245
Query: 305 IKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE 364
+ + ++ITYGFS +D + G + +
Sbjct: 246 VSR-------------------------QVITYGFS--DDADVRLINYRQVGQQSFFTVQ 278
Query: 365 R-GRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRF 423
R R I L IPG HN LN+ A IA + E A L L F G RRF
Sbjct: 279 RKDRTDLDIVLNIPGKHNALNATAAIAVA------TEEDVEDEAILT-ALLNFEGAGRRF 331
Query: 424 DLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDD 479
D +G + DD+ HHPTEV ++AAR + K L+ +FQPH YSR L DD
Sbjct: 332 DQLGEFETGNGSAMLVDDYGHHPTEVDVTIKAARAGWAEKRLVMIFQPHRYSRTRDLYDD 391
Query: 480 FANALSEADQVVV 492
FAN L D +++
Sbjct: 392 FANVLDNVDVLIM 404
>gi|145630239|ref|ZP_01786021.1| N-acetylglucosaminyl transferase [Haemophilus influenzae R3021]
gi|145641273|ref|ZP_01796853.1| D-alanine--D-alanine ligase [Haemophilus influenzae R3021]
gi|144984520|gb|EDJ91943.1| N-acetylglucosaminyl transferase [Haemophilus influenzae R3021]
gi|145274110|gb|EDK13976.1| D-alanine--D-alanine ligase [Haemophilus influenzae 22.4-21]
Length = 475
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 144/465 (30%), Positives = 234/465 (50%), Gaps = 68/465 (14%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+ R IHF+GIGG+G+S +A++ L +G+++SGSD+ + L +AGA ++IGH
Sbjct: 11 IIPEMRRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGH 70
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
+ +I+G + VV SSAI DN E++ +K +P+ +R LA++ + IAV+
Sbjct: 71 AEEHIEG------ASVVVVSSAIKDDNPELVASKQKRIPVIQRAQMLAEIMRFRHGIAVA 124
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEAD 239
G+HGK+TT +M++ + D P F +G + GKN + EAD
Sbjct: 125 GTHGKTTTTAMISMIYTQAKLD---------PTFVNGGLVKSAGKNAHLGASRYLIAEAD 175
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCA 298
E D FL L P V+VVTN++ +H+D +E D + +K+ + +FL + G V+C D
Sbjct: 176 ESDASFLHLQPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLPFYGLAVMCADDPVL 235
Query: 299 RSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS 358
L+ ++ + ++ITYGFS D+ E G
Sbjct: 236 MELVPKVGR-------------------------QVITYGFSEQADYRIEDYEQTGFQGH 270
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
++C + + L +PG HN LN+ A +A K + + A L+ L+ F G
Sbjct: 271 YTVICPNNERI-NVLLNVPGKHNALNATAALAIA------KEEGIGNEAILE-ALADFQG 322
Query: 419 VSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
RRFD +G + DD+ HHPTEV ++AAR+ + K ++ +FQPH YSR
Sbjct: 323 AGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVGVTIKAAREGWGEKRIVMIFQPHRYSRTR 382
Query: 475 VLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
L DDF LS+ D +++ L ++A ++ A + +C
Sbjct: 383 DLFDDFVQVLSQVDALIM-------LDVYAAGEAPIVGADSKSLC 420
>gi|15892254|ref|NP_359968.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia conorii str.
Malish 7]
gi|20532173|sp|Q92IT9.1|MURC_RICCN RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|15619392|gb|AAL02869.1| UDP-N-acetylmuramate--alanine ligase [Rickettsia conorii str.
Malish 7]
Length = 485
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 142/427 (33%), Positives = 214/427 (50%), Gaps = 48/427 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG G+S +A++ G++V GSDLV + + L G + +GH+ NI
Sbjct: 16 IHFIGIGGVGMSGIAEILYNLGYKVQGSDLVENYNTKRLESYGIKIFLGHAEQNITN--- 72
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ VV SSAI N EI A +PI +R LA+L +AVSGSHGK+TT S
Sbjct: 73 ---VSYVVISSAINPKNPEIKEALERKIPIIRRADMLAELMRLKCSVAVSGSHGKTTTTS 129
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVT 256
++A + +A G T I G + + Y G N+++ EADE D F+ + ++A++T
Sbjct: 130 LVACLFEAAGLCPTVINGGIINNKSTNA--YLGSSNYLIAEADESDATFIHIPSTIAIIT 187
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY--- 313
N+D EH+D + D + + FR F+ + G V C D + R L+D I + + Y
Sbjct: 188 NIDPEHLDYYRDFETLIGAFRSFITNLPFYGFAVCCIDHKIVRKLVDDITERKIVTYGID 247
Query: 314 ---SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
+ + N ++D+ D KI PNV G + +
Sbjct: 248 SEDAHIIAFNINTDIASSTFDVKI---------------SLPNVLGTT---------IIE 283
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+I++ PG HN+LNSLA IA + L I +K + F GV RRF +
Sbjct: 284 KITIPTPGRHNILNSLAAIAVGIEL-------DFGIKAIKNGFNNFKGVKRRFTKVAEYN 336
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQ--RFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
I DD+AHHP E++A L A+ N +IA+FQPH YSR+ L DDF ++AD
Sbjct: 337 NASIIDDYAHHPEEIKATLATAKNIANKQNGKVIAIFQPHRYSRMQYLFDDFMLCFADAD 396
Query: 489 QVVVSAV 495
+ ++ +
Sbjct: 397 ILYITDI 403
>gi|184201127|ref|YP_001855334.1| UDP-N-acetylmuramate--L-alanine ligase [Kocuria rhizophila DC2201]
gi|183581357|dbj|BAG29828.1| UDP-N-acetylmuramate--L-alanine ligase [Kocuria rhizophila DC2201]
Length = 468
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 145/423 (34%), Positives = 209/423 (49%), Gaps = 38/423 (8%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G +H +G+GG+G+SA+A+L L +G VSGSD S+ + L GA + +G +++ G
Sbjct: 13 GRVHLIGMGGAGMSAVARLLLARGVPVSGSDAKDSAGLRDLESLGATVFVGQDAAHVAGA 72
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
+ VV S+AI + N E+ A+ G+ + R LA +IAV+G+HGK+TT
Sbjct: 73 ------STVVVSTAIREQNPELAAARGAGLRVLHRSQALAAAMHGRRVIAVAGTHGKTTT 126
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
+SM A L+A G + +GAHV + + G+ FV EADE DG F+ P VAVV
Sbjct: 127 SSMTAVALRAAGLRPSWAIGAHVADL-GANAGFDAGEWFVAEADESDGSFMAYHPEVAVV 185
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN++ +H+D + +A F F IR GG LV C D A L ++ + G
Sbjct: 186 TNVEPDHLDHYGSAEAFHRAFDEFSDTIREGGTLVACADDPGAARLAERRRTRGG----- 240
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYI--LCERGRPLAQIS 373
+++YG D + P+ G + I GR A +
Sbjct: 241 -----------------AVLSYGTDPGADVVLSELTPHGTGTTCRIGFPVPGGRREALLE 283
Query: 374 LQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH 433
L +PG HN ++ A A D Q L L+ F G +RRFDL G G
Sbjct: 284 LAVPGAHNAADAAAAFAAGCAAGADPEQ-------LLAGLADFHGSARRFDLKGEQGGVR 336
Query: 434 IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVS 493
++DD+AHHPTEV A L AAR + ++A+FQPH YSR + F AL AD V+
Sbjct: 337 VFDDYAHHPTEVAAALGAARDVAGGRRVLAIFQPHLYSRTREFAEAFCRALELADLACVT 396
Query: 494 AVL 496
V
Sbjct: 397 DVF 399
>gi|158426180|ref|YP_001527472.1| UDP-N-acetylmuramate--L-alanine ligase [Azorhizobium caulinodans
ORS 571]
gi|172047924|sp|A8HZ95.1|MURC_AZOC5 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|158333069|dbj|BAF90554.1| UDP-N-acetylmuramate-alanine ligase [Azorhizobium caulinodans ORS
571]
Length = 467
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 151/427 (35%), Positives = 226/427 (52%), Gaps = 48/427 (11%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ G+ V GSD+ ++ ++ L E G + +GH NI G
Sbjct: 8 GSIHFVGIGGIGMSGIAEVLNNLGYTVQGSDVAENANVKRLRENGIAVTVGHKAENIDGA 67
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
+ VV SSAI +DN E+L A++ +P+ +R LA+L + +A++G+HGK+TT
Sbjct: 68 E------VVVVSSAIKRDNPELLAARAKRLPVVRRAEMLAELMRLKSCVAIAGTHGKTTT 121
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
S++A +L G D T I G + + + G G V+EADE DG FL L VA++
Sbjct: 122 TSLVATLLDKGGFDPTVINGGIINAYGTNARL-GAGDWMVVEADESDGTFLKLPAEVAII 180
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D F+ D V+ FR F++ + G V+C D ++L+ +I+
Sbjct: 181 TNIDPEHLDHFKTFDKVQEAFRTFVENVPFYGFAVMCIDHPVVQALVGRIE--------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG-SDYILCERGRP------ 368
D +IITYG + D V +++GG + + + R R
Sbjct: 232 ---------------DRRIITYGENPQADVRLVDV--DLRGGITRFGVVFRDRAGTAEHR 274
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
+ + L +PG HN LN+ A IA L + E+I F GV RRF G
Sbjct: 275 IDGLKLPMPGKHNALNATAAIAVARELRVPDDRIIEAI-------GGFGGVKRRFTRTGE 327
Query: 429 IYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
G I+DD+ HHP E+ AVL+AAR + +IAV QPH Y+RL L D+F ++AD
Sbjct: 328 WKGATIFDDYGHHPVEISAVLRAARAATEGQ-VIAVVQPHRYTRLASLFDEFCTCFNDAD 386
Query: 489 QVVVSAV 495
V+V+ V
Sbjct: 387 HVIVAPV 393
>gi|408374356|ref|ZP_11172044.1| UDP-N-acetylmuramate--L-alanine ligase [Alcanivorax hongdengensis
A-11-3]
gi|407765814|gb|EKF74263.1| UDP-N-acetylmuramate--L-alanine ligase [Alcanivorax hongdengensis
A-11-3]
Length = 476
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 144/416 (34%), Positives = 209/416 (50%), Gaps = 45/416 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ QG+ +SGSD+ S+ +E L G + IGH NI G D
Sbjct: 19 IHFVGIGGVGMCGIAEVLANQGYAISGSDIKESAVVERLRSQGVRVEIGHRAENIDGAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV S+A+ DNVE+ A +P+ R LA+L + IAV+G+HGK+TT S
Sbjct: 78 -----VVVTSTAVNTDNVEVAAAHEQRIPVVPRAQMLAELMRFRHGIAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M A ++ G D T ++G + + G + V EADE D FL L P A+VTN
Sbjct: 133 MTAAIMAEAGMDPTFVIGGRLNSAGTNARL-GQSRYLVAEADESDASFLHLQPMSAIVTN 191
Query: 258 LDWEHVDIFEDEDA-VKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
++ +H+ + + A +++ F FL + G V+C D R LL ++ +
Sbjct: 192 IEADHMHTYGGDFARLENTFIEFLHNLPFYGVAVMCVDDPVVRRLLPRVNR--------- 242
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++I YGFS D AE+V ++ + G PL I+L +
Sbjct: 243 ----------------QVIRYGFSDDADLRAENVQQKGMSTRFRVIRKEGAPL-DITLNM 285
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----GC 432
PG HNVLN+LA IA D+ E+I L+ F GV RRFD+ G +
Sbjct: 286 PGRHNVLNALAAIAVAA----DEGADDEAIV---RGLNHFTGVGRRFDVQGEYHFAGGSA 338
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
+ DD+ HHP+EV + A R +P + L +FQPH Y+R L +DF LS D
Sbjct: 339 TLVDDYGHHPSEVAVTIDAIRAGWPGRRLAMLFQPHRYTRTQDLYEDFVEVLSGVD 394
>gi|229846170|ref|ZP_04466282.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus influenzae
7P49H1]
gi|229811174|gb|EEP46891.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus influenzae
7P49H1]
Length = 475
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 145/465 (31%), Positives = 234/465 (50%), Gaps = 68/465 (14%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+ R IHF+GIGG+G+S +A++ L +G+++SGSD+ + L +AGA ++IGH
Sbjct: 11 IIPEMRRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGH 70
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
+ +I+G + VV SSAI DN E++ +K +P+ +R LA++ + IAV+
Sbjct: 71 AEEHIEG------ASVVVVSSAIKDDNPELVASKQKRIPVIQRAQMLAEIMRFRHGIAVA 124
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEAD 239
G+HGK+TT +M++ + D P F +G + GKN + EAD
Sbjct: 125 GTHGKTTTTAMISMIYTQAKLD---------PTFVNGGLVKSAGKNAHLGASRYLIAEAD 175
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCA 298
E D FL L P V+VVTN++ +H+D +E D + +K+ + +FL + G V+C D
Sbjct: 176 ESDASFLHLQPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLPFYGLAVMCADDPVL 235
Query: 299 RSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS 358
L+ ++ + ++ITYGFS D+ E G
Sbjct: 236 MELVPKVGR-------------------------QVITYGFSEQADYRIEDYEQTGFQGH 270
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
++C + I L +PG HN LN+ A +A K + + A L+ L+ F G
Sbjct: 271 YTVICPNNERI-NILLNVPGKHNALNATAALAVA------KEEGIANEAILE-ALADFQG 322
Query: 419 VSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
RRFD +G + DD+ HHPTEV ++AAR+ + +K ++ +FQPH YSR
Sbjct: 323 AGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVDVTIKAAREGWGDKRIVMIFQPHRYSRTR 382
Query: 475 VLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
L DDF LS D +++ L ++A ++ A + +C
Sbjct: 383 DLFDDFVQVLSLVDALIM-------LDVYAAGEAPIVGADSKSLC 420
>gi|145637109|ref|ZP_01792772.1| D-alanine--D-alanine ligase [Haemophilus influenzae PittHH]
gi|145269763|gb|EDK09703.1| D-alanine--D-alanine ligase [Haemophilus influenzae PittHH]
Length = 475
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 144/465 (30%), Positives = 234/465 (50%), Gaps = 68/465 (14%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+ R IHF+GIGG+G+S +A++ L +G+++SGSD+ + L +AGA ++IGH
Sbjct: 11 IIPEMRRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGH 70
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
+ +I+G + VV SSAI DN E++ +K +P+ +R LA++ + IAV+
Sbjct: 71 AEEHIKG------ASVVVVSSAIKDDNPELVASKQKRIPVIQRAQMLAEIMRFRHGIAVA 124
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEAD 239
G+HGK+TT +M++ + D P F +G + GKN + EAD
Sbjct: 125 GTHGKTTTTAMISMIYTQAKLD---------PTFVNGGLVKSAGKNAHLGASRYLIAEAD 175
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCA 298
E D FL L P V+VVTN++ +H+D +E D + +K+ + +FL + G V+C D
Sbjct: 176 ESDASFLHLQPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLPFYGLAVMCADDPVL 235
Query: 299 RSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS 358
L+ ++ + ++ITYGFS D+ E G
Sbjct: 236 MELVPKVGR-------------------------QVITYGFSEQADYRIEDYEQTGFQGH 270
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
++C + + L +PG HN LN+ A +A K + + A L+ L+ F G
Sbjct: 271 YTVICPNNERI-NVLLNVPGKHNALNATAALAIA------KEEGIGNEAILE-ALADFQG 322
Query: 419 VSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
RRFD +G + DD+ HHPTEV ++AAR+ + K ++ +FQPH YSR
Sbjct: 323 AGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVGVTIKAAREGWGEKRIVMIFQPHRYSRTR 382
Query: 475 VLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
L DDF LS+ D +++ L ++A ++ A + +C
Sbjct: 383 DLFDDFVQVLSQVDALIM-------LDVYAAGEAPIVGADSKSLC 420
>gi|87122626|ref|ZP_01078503.1| UDP-N-acetylmuramate--alanine ligase [Marinomonas sp. MED121]
gi|86162084|gb|EAQ63372.1| UDP-N-acetylmuramate--alanine ligase [Marinomonas sp. MED121]
Length = 478
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 144/419 (34%), Positives = 208/419 (49%), Gaps = 50/419 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG G+ +A++ QG+ VSGSDL S + L + G + GH SN++
Sbjct: 19 IHFIGIGGVGMCGIAEVLHNQGYTVSGSDLNESVTTKRLSDLGIKVFYGHDASNVES--- 75
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ +V S+AI +N EI K +PI +R LA+L + IAV+G+HGK+TT S
Sbjct: 76 ---AHVIVVSTAINIENPEIKWGKENRIPIVRRAEMLAELMRYRHGIAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL A GD T ++G + + G K V EADE D FL L P A+VTN
Sbjct: 133 LMASVLAATGDAPTFVIGGRLTSAGTNAQL-GSSKYLVAEADESDASFLHLQPHSAIVTN 191
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D + VK F FL + G V+C D + R +L Q+ +
Sbjct: 192 IDEDHMDTYGGDFEKVKHTFVEFLHNLPFYGMAVLCVDDENVREILPQVSR--------- 242
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS--DYILCERGRPLAQISL 374
I+TYG D+YA + VQ G +++ +I L
Sbjct: 243 ----------------PILTYGIEHEADFYATDL---VQTGRYCEFVAHRPNLEPIRIRL 283
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY---- 430
+PG HNVLN+LA IA L E++A ++ L F GV RRF +
Sbjct: 284 PMPGKHNVLNALATIAVATDL------GVEAVA-IQAGLMGFEGVGRRFQEQSPLALPKS 336
Query: 431 -GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
DD+ HHP EV + A R +P+K L+ ++QPH +SR L +DF LS+ D
Sbjct: 337 GEVMFIDDYGHHPREVEVTIDAIRDGWPDKRLVMIYQPHRFSRTRDLYEDFVKVLSKVD 395
>gi|315604422|ref|ZP_07879488.1| UDP-N-acetylmuramate--L-alanine ligase [Actinomyces sp. oral taxon
180 str. F0310]
gi|315314128|gb|EFU62179.1| UDP-N-acetylmuramate--L-alanine ligase [Actinomyces sp. oral taxon
180 str. F0310]
Length = 463
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 141/422 (33%), Positives = 220/422 (52%), Gaps = 44/422 (10%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
H +G+GG+G+S +A+L + +G V+GSD S ++ L G ++ +GH S++
Sbjct: 11 HLIGVGGAGMSVVAELLVSRGAVVAGSDREESQVLDHLRSVGVHVDVGHDASHVD----- 65
Query: 139 RFPNAVVA-SSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
P AVV SSAI +DN E+ A+ G + R LA +AV+G+HGK++T+
Sbjct: 66 --PEAVVVVSSAIREDNPELAVARRRGQLVIHRSQALALAASGMRFVAVAGAHGKTSTSG 123
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
MLA L+A G D + VG +PQ G+ GGG+ FV EADE DG FL SP++ +VTN
Sbjct: 124 MLAIALRACGLDPSVAVGGVLPQLGTGA-HLGGGEVFVAEADESDGSFLNYSPAIEIVTN 182
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
++ +H+D + + + IF F++++ GG LV C + A L D K
Sbjct: 183 VEPDHLDRYHSREEFEEIFVEFVRRLVPGGLLVACAEDPGAARLADTAKS---------- 232
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAE----SVCPNVQGGSDYILCERGRPLAQIS 373
+++TYG + A+ V + +G S + G A++
Sbjct: 233 ------------LGARVVTYGREEHSQCEADVLICDVSVDAEGASASLAW--GPRRARLR 278
Query: 374 LQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH 433
L +PG H+VLN+ A + G + Q+ + L + G +RRF+ G + G
Sbjct: 279 LAVPGEHHVLNAAAAWVAGIE-CGVEPQA------MADGLGTYAGAARRFESRGAVGGRR 331
Query: 434 IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVS 493
++DD+AHHPTEV A ++ AR + VFQPH YSR + + FA+ALS AD VV++
Sbjct: 332 LFDDYAHHPTEVEAAIEQARVVAAGGEVTVVFQPHLYSRTRIFAERFASALSRADHVVLA 391
Query: 494 AV 495
+
Sbjct: 392 GI 393
>gi|451335953|ref|ZP_21906517.1| UDP-N-acetylmuramate--alanine ligase [Amycolatopsis azurea DSM
43854]
gi|449421519|gb|EMD26940.1| UDP-N-acetylmuramate--alanine ligase [Amycolatopsis azurea DSM
43854]
Length = 469
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 145/416 (34%), Positives = 213/416 (51%), Gaps = 36/416 (8%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
H +GIGG+G+S +A++ L +G +VSGSD S L GA + +G S N+
Sbjct: 13 HLIGIGGAGMSGIARILLARGAQVSGSDAKESRAFLSLRAQGAEIAVGQSAENLDAF--P 70
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
P++V+ S+AI DN E++ A+ G+ + R LA L E + + ++G+HGK++T SM
Sbjct: 71 EGPSSVIVSTAIKDDNPELVAARERGITVLHRAQALAGLMEGHRVACIAGTHGKTSTTSM 130
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
L L+ D + +G + + + +G G FV EADE DG FL SPSVAVVTN+
Sbjct: 131 LTVALQHCRLDPSFAIGGDLNE-SGANAHHGEGGLFVAEADESDGSFLAYSPSVAVVTNV 189
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVV 318
+ +H+D +A S+F FL +I GG LV+CGD + A L Q ++
Sbjct: 190 EPDHLDHHGTAEAYVSVFTDFLGRIEPGGLLVVCGDDEGAAKLGAQAEE----------- 238
Query: 319 SNQSSDLWGQGHDYKIITYGFS--SFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
++ +YG S +D P GG I + G +A + + +
Sbjct: 239 -----------RGIRVRSYGRSVTGADDAKVLDFVPTPDGGVVRISLQ-GEEIA-LRVAV 285
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG H LN++A + + L + L L+ F GV RRF+ G +YD
Sbjct: 286 PGEHMALNAIAALLAGIEL-------GAPVDRLADGLAAFGGVRRRFEFKGRSGDVRVYD 338
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
D+AHHPTEV A L+A R ++ VFQPH YSR +FA ALS AD+VVV
Sbjct: 339 DYAHHPTEVDAQLRAVRTAAGQGRVVVVFQPHLYSRTKTFSKEFAAALSLADEVVV 394
>gi|383483123|ref|YP_005392037.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia montanensis str.
OSU 85-930]
gi|378935477|gb|AFC73978.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia montanensis str.
OSU 85-930]
Length = 485
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 142/427 (33%), Positives = 215/427 (50%), Gaps = 48/427 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG G+S +A++ G++V GSDLV + + L G + +GH+ NI
Sbjct: 16 IHFIGIGGVGMSGIAEILHNLGYKVQGSDLVENYNTKRLESYGIKIFLGHAEQNITN--- 72
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ VV SSAI N EI A +PI +R LA+L +AVSGSHGK+TT S
Sbjct: 73 ---VSYVVISSAINPKNPEIKEALERKIPIIRRADMLAELMRLKCSVAVSGSHGKTTTTS 129
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVT 256
++A + +A G T I G + + Y G N+++ EADE D F+ + ++A++T
Sbjct: 130 LVACLFEAAGLCPTVINGGIINNKSTNA--YLGSSNYLIAEADESDATFIHIPSTIAIIT 187
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY--- 313
N+D EH+D ++D + + FR F+ + G V C D + R L+D I + + Y
Sbjct: 188 NIDPEHLDYYKDFETLIGAFRSFITNLPFYGFAVCCIDHKIVRKLVDDITERKTVTYGID 247
Query: 314 ---SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
+ + N ++D+ D KI PNV G + +
Sbjct: 248 SEDAHIIAFNINTDIASSTFDVKI---------------SLPNVLGTT---------IIE 283
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+I++ PG HN+LNSLA IA + L I +K + F GV RRF +
Sbjct: 284 KITIPTPGRHNILNSLAAIAVGIEL-------DFGIKAIKNGFNNFKGVKRRFTKVAEYN 336
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQ--RFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
I DD+AHHP E++A L A+ N +IA+FQPH YSR+ L DDF ++AD
Sbjct: 337 KASIIDDYAHHPEEIKATLATAKNIANKQNGKVIAIFQPHRYSRMQYLFDDFMLCFADAD 396
Query: 489 QVVVSAV 495
+ ++ +
Sbjct: 397 ILYITDI 403
>gi|169629094|ref|YP_001702743.1| UDP-N-acetylmuramate--L-alanine ligase [Mycobacterium abscessus
ATCC 19977]
gi|420909591|ref|ZP_15372904.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium abscessus
6G-0125-R]
gi|420915977|ref|ZP_15379282.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium abscessus
6G-0125-S]
gi|420924538|ref|ZP_15387834.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium abscessus
6G-0728-S]
gi|420926867|ref|ZP_15390150.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium abscessus
6G-1108]
gi|420931060|ref|ZP_15394335.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium massiliense
1S-151-0930]
gi|420936607|ref|ZP_15399876.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium massiliense
1S-152-0914]
gi|420941318|ref|ZP_15404577.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium massiliense
1S-153-0915]
gi|420945759|ref|ZP_15409012.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium massiliense
1S-154-0310]
gi|420966376|ref|ZP_15429582.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium abscessus
3A-0810-R]
gi|420977211|ref|ZP_15440391.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium abscessus
6G-0212]
gi|420982585|ref|ZP_15445755.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium abscessus
6G-0728-R]
gi|421007162|ref|ZP_15470274.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium abscessus
3A-0119-R]
gi|421012515|ref|ZP_15475602.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium abscessus
3A-0122-R]
gi|421017424|ref|ZP_15480485.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium abscessus
3A-0122-S]
gi|421022859|ref|ZP_15485907.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium abscessus
3A-0731]
gi|421028589|ref|ZP_15491624.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium abscessus
3A-0930-R]
gi|421033661|ref|ZP_15496683.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium abscessus
3A-0930-S]
gi|226711870|sp|B1MP38.1|MURC_MYCA9 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|169241061|emb|CAM62089.1| UDP-N-acetylmuramate--L-alanine ligase MurC [Mycobacterium
abscessus]
gi|392121965|gb|EIU47730.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium abscessus
6G-0125-R]
gi|392123661|gb|EIU49423.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium abscessus
6G-0125-S]
gi|392129191|gb|EIU54941.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium abscessus
6G-0728-S]
gi|392135552|gb|EIU61290.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium abscessus
6G-1108]
gi|392135819|gb|EIU61556.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium massiliense
1S-151-0930]
gi|392142122|gb|EIU67847.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium massiliense
1S-152-0914]
gi|392151286|gb|EIU76997.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium massiliense
1S-153-0915]
gi|392158967|gb|EIU84663.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium massiliense
1S-154-0310]
gi|392167792|gb|EIU93473.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium abscessus
6G-0212]
gi|392174603|gb|EIV00270.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium abscessus
6G-0728-R]
gi|392200091|gb|EIV25698.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium abscessus
3A-0119-R]
gi|392205055|gb|EIV30639.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium abscessus
3A-0122-R]
gi|392212359|gb|EIV37921.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium abscessus
3A-0122-S]
gi|392215556|gb|EIV41104.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium abscessus
3A-0731]
gi|392230202|gb|EIV55712.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium abscessus
3A-0930-S]
gi|392231154|gb|EIV56663.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium abscessus
3A-0930-R]
gi|392254320|gb|EIV79786.1| UDP-N-acetylmuramate--alanine ligase [Mycobacterium abscessus
3A-0810-R]
Length = 490
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 148/452 (32%), Positives = 228/452 (50%), Gaps = 48/452 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H VGIGG+G+S +A++ L +G +VSGSD S + L GA ++IGH + G
Sbjct: 13 VHMVGIGGAGMSGIARILLDRGAQVSGSDAKESRGVLALRARGALVNIGHDGDALDLLPG 72
Query: 138 SRFPNAVVAS-SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
P VV + +AIP+ N E++ A G+P+ R LA L Y + V+G+HGK++T
Sbjct: 73 G--PTVVVTTHAAIPKTNPELVEANRRGIPVLLRPVVLADLMAGYRTLMVTGTHGKTSTT 130
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SML L+ G D + VG + + + +G G FV EADE DG L P++ +VT
Sbjct: 131 SMLIVALQHCGYDPSFAVGGELNEAGTNA-HHGSGDVFVAEADESDGSLLQYRPNLIIVT 189
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F +A ++F F + + G LV+C D A +L + + G++ G
Sbjct: 190 NIEADHLDHFGSVEAYSAVFDEFAETLGSEGVLVVCLDDPGAAALARR-AHERGIRVRGY 248
Query: 317 VVSNQSS----DLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQI 372
++Q+ + GQ D++ G ++ ES P +
Sbjct: 249 GSADQAEAGDVPVAGQLRDWQFKDTGATAQIQLAGES-APRT-----------------M 290
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC 432
L +PG H LN+LA + T + ++ + L+ F GV RRF+L+G++
Sbjct: 291 RLSVPGRHMALNALAAVVTAAEI-------GAAVDDVLDGLAGFEGVRRRFELVGSVESV 343
Query: 433 HIYDDFAHHPTEVRAVLQA-----ARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
++DD+AHHPTEVR VLQA A+Q F + VFQPH YSR +FA+ALS A
Sbjct: 344 RVFDDYAHHPTEVRTVLQAVSGIVAQQGFGRS--VVVFQPHLYSRTAAFATEFADALSIA 401
Query: 488 DQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
D LVF L ++ L ++I
Sbjct: 402 D-------LVFVLDVYGAREAPLPGVTGALIV 426
>gi|340753372|ref|ZP_08690158.1| UDP-N-acetylmuramate-L-alanine ligase [Fusobacterium sp. 2_1_31]
gi|229422964|gb|EEO38011.1| UDP-N-acetylmuramate-L-alanine ligase [Fusobacterium sp. 2_1_31]
Length = 463
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 142/429 (33%), Positives = 230/429 (53%), Gaps = 60/429 (13%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
I+F+GI G G+S LAK+ +G++V G+D+ + E LL G ++ H N++G D
Sbjct: 4 IYFIGINGIGMSGLAKIMKCKGYDVKGADICSNYVTEELLSMGITVYNEHDEENVKGAD- 62
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
V+AS+AI + N E +AK G+ I KR LAKL + IA++G+HGK+TT+S
Sbjct: 63 -----YVIASTAIKETNPEYAYAKENGIKILKRGELLAKLLNRETGIAIAGTHGKTTTSS 117
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
ML+ V+ + D T +VG +P+ + G + F+ EADE D FL ++P +V+TN
Sbjct: 118 MLSAVM--LKKDPTIVVGGILPEIKSNA-RPGKSEYFIAEADESDNSFLFMNPEYSVITN 174
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI-KQDTGLKYSGG 316
+D +H+D+ + D +K F F+ + +IC DS ++L+D I K G +
Sbjct: 175 IDADHLDVHGNLDNIKKSFIEFI--LHTQKESIICMDS---KNLMDAILKLPEGKSVTTY 229
Query: 317 VVSNQSSDLWGQG---HDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQIS 373
+ ++++D++ + D K I F + V ++G + S
Sbjct: 230 SIKDENADIYAKNIRIVDRKTI---FEVY-------VNKELKG--------------EFS 265
Query: 374 LQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI-----GT 428
L IPG HN+ NSL VI L +K + E+ L++F G RR+D++
Sbjct: 266 LNIPGEHNIQNSLPVIYLALKFGLNKDEIQEA-------LNQFKGSKRRYDVLYDQELEN 318
Query: 429 IYG-----CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANA 483
YG I DD+AHHPTE++A L+A + + L+A+FQPH YSR+ L D+F +A
Sbjct: 319 GYGSKTKRVRIVDDYAHHPTEIKATLKAIKS-VDSSRLVAIFQPHRYSRVHFLLDEFKDA 377
Query: 484 LSEADQVVV 492
++ D+V++
Sbjct: 378 FADVDKVIL 386
>gi|218768809|ref|YP_002343321.1| UDP-N-acetylmuramate--L-alanine ligase [Neisseria meningitidis
Z2491]
gi|385854589|ref|YP_005901102.1| UDP-N-acetylmuramate--L-alanine ligase [Neisseria meningitidis
M01-240355]
gi|421539626|ref|ZP_15985785.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 93004]
gi|421541754|ref|ZP_15987869.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis NM255]
gi|421547945|ref|ZP_15993976.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis
NM2781]
gi|421549979|ref|ZP_15995986.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 69166]
gi|433468624|ref|ZP_20426059.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 98080]
gi|433470690|ref|ZP_20428087.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 68094]
gi|433474904|ref|ZP_20432249.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 88050]
gi|433477004|ref|ZP_20434330.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 70012]
gi|433479103|ref|ZP_20436401.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 63041]
gi|433502155|ref|ZP_20459125.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis NM126]
gi|433512785|ref|ZP_20469585.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 63049]
gi|433514802|ref|ZP_20471577.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis
2004090]
gi|433517012|ref|ZP_20473763.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 96023]
gi|433519279|ref|ZP_20476002.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 65014]
gi|433521208|ref|ZP_20477908.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 61103]
gi|433523401|ref|ZP_20480070.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 97020]
gi|433525458|ref|ZP_20482099.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 69096]
gi|433528873|ref|ZP_20485480.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis
NM3652]
gi|433529683|ref|ZP_20486279.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis
NM3642]
gi|433531795|ref|ZP_20488363.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis
2007056]
gi|433533809|ref|ZP_20490357.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis
2001212]
gi|433536051|ref|ZP_20492567.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 77221]
gi|433538178|ref|ZP_20494663.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 70030]
gi|433540354|ref|ZP_20496810.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 63006]
gi|325203530|gb|ADY98983.1| UDP-N-acetylmuramate-L-alanine ligase [Neisseria meningitidis
M01-240355]
gi|402319234|gb|EJU54745.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis NM255]
gi|402321120|gb|EJU56599.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 93004]
gi|402327287|gb|EJU62678.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis
NM2781]
gi|402330893|gb|EJU66236.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 69166]
gi|432205843|gb|ELK61859.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 98080]
gi|432211366|gb|ELK67319.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 68094]
gi|432212061|gb|ELK68004.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 88050]
gi|432216925|gb|ELK72797.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 70012]
gi|432218457|gb|ELK74315.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 63041]
gi|432242829|gb|ELK98344.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis NM126]
gi|432249611|gb|ELL05014.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 63049]
gi|432255086|gb|ELL10417.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 96023]
gi|432255862|gb|ELL11188.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis
2004090]
gi|432256207|gb|ELL11531.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 65014]
gi|432261747|gb|ELL16993.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 97020]
gi|432262246|gb|ELL17490.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 61103]
gi|432263054|gb|ELL18283.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 69096]
gi|432263977|gb|ELL19187.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis
NM3652]
gi|432268978|gb|ELL24142.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis
NM3642]
gi|432269274|gb|ELL24436.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis
2007056]
gi|432273053|gb|ELL28152.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis
2001212]
gi|432275503|gb|ELL30574.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 70030]
gi|432275855|gb|ELL30921.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 77221]
gi|432278003|gb|ELL33048.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 63006]
Length = 468
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 142/435 (32%), Positives = 218/435 (50%), Gaps = 50/435 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
KNR IHFVGIGG G+S +A++ GF+VSGSD ++ E L G ++ GH+
Sbjct: 1 MKNRVTNIHFVGIGGVGMSGIAEVLHNLGFKVSGSDQARNAATEHLGSLGIQVYPGHTAE 60
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
++ G D VV S+A+ ++N E++ A +P+ R LA+L + IA++G+H
Sbjct: 61 HVNGAD------VVVTSTAVKKENPEVVAALEQQIPVIPRALMLAELMRFRDGIAIAGTH 114
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S+ A +L A G D T ++G + + G G+ V EADE D FL L+P
Sbjct: 115 GKTTTTSLTASILGAAGLDPTFVIGGKL-NAAGTNARLGKGEYIVAEADESDASFLHLTP 173
Query: 251 SVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
++VVTN+D +H+D + + + F F+ ++ G +C DS+ R++L ++ +
Sbjct: 174 IMSVVTNIDEDHMDTYGHSVEKLHQAFIDFIHRMPFYGKAFLCIDSEHVRAILPKVSK-- 231
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPL 369
Y+ TYG D YA + NV + + + +
Sbjct: 232 --PYA---------------------TYGLDDTADIYATDI-ENVGAQMKFTVHVQMKGH 267
Query: 370 AQ----ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
Q + L +PG HNVLN+LA I L + S+ ++ L F GV RRF
Sbjct: 268 EQGSFEVVLNMPGRHNVLNALAAIGVAL-------EVGASVEAIQKGLLGFEGVGRRFQK 320
Query: 426 IGTIY-----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
G I + DD+ HHP E+ A L AAR +P K L+ FQPH Y+R L +DF
Sbjct: 321 YGDIKLPNGGTALLVDDYGHHPVEMAATLSAARGAYPEKRLVLAFQPHRYTRTRDLFEDF 380
Query: 481 ANALSEADQVVVSAV 495
L+ D +V++ V
Sbjct: 381 TKVLNTVDALVLTEV 395
>gi|27381712|ref|NP_773241.1| UDP-N-acetylmuramate--L-alanine ligase [Bradyrhizobium japonicum
USDA 110]
gi|44888203|sp|Q89FU8.1|MURC_BRAJA RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|27354881|dbj|BAC51866.1| UDP-N-acetylmuramate-alanine ligase [Bradyrhizobium japonicum USDA
110]
Length = 467
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 148/426 (34%), Positives = 227/426 (53%), Gaps = 46/426 (10%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G IHFVGIGG G+S +A++ + G+ V GSD + ++ L + GA + +GH N+ G
Sbjct: 8 GPIHFVGIGGIGMSGIAEVLVNLGYAVQGSDASDNYNLDRLRKKGAKVSVGHKAENVDGA 67
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
+ VV S+AI +DN E++ A+ +P+ +R LA+L + +A++G+HGK+TT
Sbjct: 68 E------VVVVSTAIKRDNPELMAARERRIPVVRRAEMLAELMRLKSCVAIAGTHGKTTT 121
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
+M+A +L A G D T I G + + + G G V+EADE DG FL L VA+V
Sbjct: 122 TTMVATLLDAGGLDPTVINGGIINAYGSNARL-GAGDWMVVEADESDGTFLKLPTDVAIV 180
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D F+ +AV+ FR F++ + G V+C D +SL+ +I+
Sbjct: 181 TNVDPEHLDHFKTFEAVQDAFRHFVENLPFYGFAVMCIDHPVVQSLVGKIE--------- 231
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR------PL 369
D +IITYG + D + P + GGS + + R R +
Sbjct: 232 ---------------DRRIITYGENPQADVRLVDLTP-MGGGSKFKVAFRDRKTGAVHEI 275
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
+ L +PG HN N+ A IA R+ S ++ ++ F GV RRF G
Sbjct: 276 PDLMLPMPGRHNASNATAAIAVA-------RELGVSDEAIRSAIAGFGGVKRRFTKTGEW 328
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
G + DD+ HHP E+ AVL+AAR+ N ++AV QPH Y+RL L ++F ++AD
Sbjct: 329 NGVTVIDDYGHHPVEIAAVLKAAREST-NGKIVAVVQPHRYTRLQSLFEEFCTCFNDADA 387
Query: 490 VVVSAV 495
V+V+ V
Sbjct: 388 VIVADV 393
>gi|374319052|ref|YP_005065550.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia slovaca 13-B]
gi|383750976|ref|YP_005426077.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia slovaca str.
D-CWPP]
gi|360041600|gb|AEV91982.1| UDP-N-acetylmuramate--alanine ligase [Rickettsia slovaca 13-B]
gi|379773990|gb|AFD19346.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia slovaca str.
D-CWPP]
Length = 485
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 142/427 (33%), Positives = 214/427 (50%), Gaps = 48/427 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG G+S +A++ G++V GSDLV + + L G + +GH+ NI
Sbjct: 16 IHFIGIGGVGMSGIAEILYNLGYKVQGSDLVENYNTKRLESYGIKIFLGHAEQNITN--- 72
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ VV SSAI N EI A +PI +R LA+L +AVSGSHGK+TT S
Sbjct: 73 ---VSYVVISSAINPKNPEIKEALERKIPIIRRADMLAELMRLKCSVAVSGSHGKTTTTS 129
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVT 256
++A + +A G T I G + + Y G N+++ EADE D F+ + ++A++T
Sbjct: 130 LVACLFEAAGLCPTVINGGIINNKSTNA--YLGSSNYLIAEADESDATFIHIPSTIAIIT 187
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY--- 313
N+D EH+D + D + + FR F+ + G V C D + R L+D I + + Y
Sbjct: 188 NIDPEHLDYYRDFETLIGAFRSFITNLPFYGFAVCCIDHKIVRKLVDDITERKIVTYGID 247
Query: 314 ---SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
+ + N ++D+ D KI PNV G + +
Sbjct: 248 SEDAHIIAFNINTDIASSTFDVKI---------------SLPNVLGTT---------IIE 283
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+I++ PG HN+LNSLA IA + L I +K + F GV RRF +
Sbjct: 284 KITIPTPGRHNILNSLAAIAVGIEL-------DFGIKAIKNGFNNFKGVKRRFTKVAEYN 336
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQ--RFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
I DD+AHHP E++A L A+ N +IA+FQPH YSR+ L DDF ++AD
Sbjct: 337 NASIIDDYAHHPEEIKATLATAKNIANKQNGKVIAIFQPHRYSRMQYLFDDFMLCFADAD 396
Query: 489 QVVVSAV 495
+ ++ +
Sbjct: 397 ILYITDI 403
>gi|343519168|ref|ZP_08756153.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus pittmaniae HK
85]
gi|343392934|gb|EGV05494.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus pittmaniae HK
85]
Length = 475
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 148/457 (32%), Positives = 233/457 (50%), Gaps = 52/457 (11%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+ R IHF+GIGG+G+S +A++ L +G+ +SGSD+ + L +AGA + IGH
Sbjct: 11 IIPEMRRVQQIHFIGIGGAGMSGIAEILLNEGYRISGSDIADGPVTQRLAQAGAQIFIGH 70
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
+ NI G+ + VV SSAI DN E++ A+ +P+ +R LA++ + IAV+
Sbjct: 71 AAENIAGS------SVVVVSSAIKADNPELVAAQEKRIPVIQRAQMLAEIMRFRHGIAVA 124
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT +M++ + D T + G V + + + G + + EADE D FL
Sbjct: 125 GTHGKTTTTAMISMIYTQAKLDPTFVNGGLV-KSAGKNAYLGASRYLIAEADESDASFLH 183
Query: 248 LSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 306
L P V+VVTN++ +H+D +E D + +KS + +FL + G V+C D L+ Q+
Sbjct: 184 LQPMVSVVTNIEPDHMDTYEGDFEKMKSTYVKFLHNLPFYGLAVMCADDPVLMELVPQVG 243
Query: 307 QDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERG 366
+ ++ITYGFS D+ E G + C G
Sbjct: 244 R-------------------------QVITYGFSEHADYRIEDYEQTGFQGHYTVRCPDG 278
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
+ + L +PG HN LN+ A +A K + E+ A L L+ F G RRFD +
Sbjct: 279 ERI-NVLLNVPGKHNALNATAALAVA------KEEGVENEAILA-ALADFQGAGRRFDQL 330
Query: 427 GTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFAN 482
G + DD+ HHPTEV +QAAR+ + +K ++ +FQPH YSR L DDF
Sbjct: 331 GEFIRPNGKVRLVDDYGHHPTEVGVTIQAAREGWGDKRIVMIFQPHRYSRTRDLFDDFVQ 390
Query: 483 ALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
LS D +++ L ++A ++ A + +C
Sbjct: 391 VLSGVDALIM-------LDVYAAGEAPIVGADSKALC 420
>gi|157964317|ref|YP_001499141.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia massiliae MTU5]
gi|167017283|sp|A8F108.1|MURC_RICM5 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|157844093|gb|ABV84594.1| UDP-N-acetylmuramate--alanine ligase [Rickettsia massiliae MTU5]
Length = 485
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 142/427 (33%), Positives = 215/427 (50%), Gaps = 48/427 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG G+S +A++ G++V GSDLV + + L G + +GH+ NI
Sbjct: 16 IHFIGIGGVGMSGIAEILHNLGYKVQGSDLVENYNTKRLESYGIKIFLGHAEQNITN--- 72
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ VV SSAI N EI A +PI +R LA+L +AVSGSHGK+TT S
Sbjct: 73 ---VSYVVISSAINPKNPEIKEALERKIPIIRRADMLAELMRLKCSVAVSGSHGKTTTTS 129
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVT 256
++A + +A G T I G + + Y G N+++ EADE D F+ + ++A++T
Sbjct: 130 LVACLFEAAGLCPTVINGGIINNKSTNA--YLGSSNYLIAEADESDATFIHIPSTIAIIT 187
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY--- 313
N+D EH+D ++D + + FR F+ + G V C D + R L+D I + + Y
Sbjct: 188 NIDPEHLDYYKDFETLIGAFRSFITNLPFYGFAVCCTDHKIVRKLVDDITERKIVTYGID 247
Query: 314 ---SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
+ + N ++D+ D KI PNV G + +
Sbjct: 248 SEDAHIIAFNINTDIASSTFDVKI---------------SLPNVLGTT---------IIE 283
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+I++ PG HN+LNSLA IA + L I +K + F GV RRF +
Sbjct: 284 KITIPTPGRHNILNSLAAIAVGIEL-------DFGIKAIKNGFNNFKGVKRRFTKVAEYN 336
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQ--RFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
I DD+AHHP E++A L A+ N +IA+FQPH YSR+ L DDF ++AD
Sbjct: 337 KASIIDDYAHHPEEIKATLATAKNIANKQNGKVIAIFQPHRYSRMQYLFDDFMLCFADAD 396
Query: 489 QVVVSAV 495
+ ++ +
Sbjct: 397 ILYITDI 403
>gi|282902044|ref|ZP_06309942.1| UDP-N-acetylmuramate--alanine ligase [Cylindrospermopsis
raciborskii CS-505]
gi|281193131|gb|EFA68130.1| UDP-N-acetylmuramate--alanine ligase [Cylindrospermopsis
raciborskii CS-505]
Length = 489
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 148/449 (32%), Positives = 226/449 (50%), Gaps = 63/449 (14%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANL----- 123
+DF R HF+GIGG G+SALA + K+ VSGSDL + L GA++
Sbjct: 5 IDFSGRP--FHFIGIGGIGMSALAYILTKRQLPVSGSDLRPNQITRKLESLGAHIFNQQE 62
Query: 124 --------------HIGHSVSNI--QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPI 167
H H +SN Q + + V+ S+AI +N+E A +G PI
Sbjct: 63 ASNLEFFRPGAFSSHTSHILSNPSDQLSTQQKSLPQVICSTAINNNNLEYRAALELGCPI 122
Query: 168 YKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIF 227
R LA L Y+ IAV+G+HGK+TT+SM+ Y+L G D T +VG V + +G+
Sbjct: 123 LHRSDVLAALIADYHSIAVAGTHGKTTTSSMIGYMLLEAGLDPTIVVGGEVNAW-EGNAR 181
Query: 228 YGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGG 287
G K V EADE DG + +P++ ++TN++ +H D + + V F+ F + G
Sbjct: 182 LGESKYLVAEADESDGSLVKHTPAIGIITNIELDHPDHYATLEQVVETFQTFAR-----G 236
Query: 288 HLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYA 347
V+ G C + D++K G+ YS D QG DY + +
Sbjct: 237 CQVVVGSIDC-DIVRDRLK--PGISYS------LDPD---QGADYTVTNIDYR------- 277
Query: 348 ESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIA 407
P+ G+ ++ E+G+ L ++LQ+ G+HN+ N+LA +A R +
Sbjct: 278 ----PD---GTTALVWEKGKSLGVLNLQLLGLHNLSNALAAVAV-------GRSLNLEFG 323
Query: 408 CLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAAR-QRFPNKALIAVFQ 466
+ L+ F G RRF+ G + G DD+AHHP+E+RA L AAR Q P + ++ +FQ
Sbjct: 324 QIAKGLTTFEGARRRFEFKGEVDGITFIDDYAHHPSEIRATLAAARLQAKPGQRVVGIFQ 383
Query: 467 PHTYSRLVVLKDDFANALSEADQVVVSAV 495
PH YSR+ D+FAN + AD VV++ +
Sbjct: 384 PHRYSRVRTFLDEFANCFTHADLVVLTDI 412
>gi|313884894|ref|ZP_07818646.1| UDP-N-acetylmuramate--L-alanine ligase [Eremococcus coleocola
ACS-139-V-Col8]
gi|312619585|gb|EFR31022.1| UDP-N-acetylmuramate--L-alanine ligase [Eremococcus coleocola
ACS-139-V-Col8]
Length = 443
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 147/422 (34%), Positives = 219/422 (51%), Gaps = 55/422 (13%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
++ HFVGI GSG+SALA + +G++V GSDL + + LE S NI
Sbjct: 2 DKNTTYHFVGIKGSGMSALALILHGEGYKVQGSDLGKYFFTQQELENKGIPMFEFSPDNI 61
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
+ +G ++A +A D+ E++ A+ +G+PIY+ +L L + Y IAVSGSHGK
Sbjct: 62 K--EGL----TIIAGNAFGDDHPELVKARELGLPIYRYHKFLGDLIKNYTSIAVSGSHGK 115
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN-FVLEADEYDGCFLGLSPS 251
++T +L++V+ + + ++G DG+ F N F LEA EY FL SP
Sbjct: 116 TSTTGLLSHVVSHI-QPTSYLIG-------DGTGFGDEAANYFALEACEYRHHFLAYSPD 167
Query: 252 VAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
A++TN+D++H D + DAV + F Q G ++ CG+ + R L ++
Sbjct: 168 YAIITNVDFDHPDFYPSIDAVFDAMQTFANQTHKG--VIACGEDEYLRKLEAKV------ 219
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQ 371
+ YGFS N+ YA+ + + GS + + G
Sbjct: 220 ---------------------PVHFYGFSHDNEVYADKIERTPE-GSQFDVYINGEFYHH 257
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIG-DKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
L G HN+LN+LAVI TVL L G DK + IA F GV RRF +
Sbjct: 258 FVLPAFGQHNILNALAVI-TVLNLEGFDKDLVAQHIAS-------FPGVKRRFS-ARKVN 308
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+AHHP+E+RA + AA+Q+FP+K ++AVFQPHT+SR + L D+F ALS AD V
Sbjct: 309 NLTLIDDYAHHPSEIRATIDAAQQKFPHKRIVAVFQPHTFSRTIALLDEFGKALSLADDV 368
Query: 491 VV 492
+
Sbjct: 369 YL 370
>gi|310657783|ref|YP_003935504.1| UDP-N-acetylmuramate--L-alanine ligase
(UDP-N-acetylmuramoyl-L-alanine synthetase)
[[Clostridium] sticklandii]
gi|308824561|emb|CBH20599.1| UDP-N-acetylmuramate--L-alanine ligase
(UDP-N-acetylmuramoyl-L-alanine synthetase)
[[Clostridium] sticklandii]
Length = 453
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 135/419 (32%), Positives = 224/419 (53%), Gaps = 40/419 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG +S LA + + G+EVSGSD S ++ L+ GA ++IGH S + +
Sbjct: 3 IHFIGIGGISMSGLAHVCINLGYEVSGSDKSMSPILQKLINEGATIYIGHDESQLNED-- 60
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKSTTA 196
+ VV ++A+ +DN E+ A+ + + I R +L + +KY N IA+SG+HGK+TT
Sbjct: 61 ---IDLVVYTAAVKEDNPELAKARRLKLNIIDRAQFLGDIMKKYENSIAISGTHGKTTTT 117
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM V A +D T +VG ++ DG++ G + F+ EA EY FL P +A++
Sbjct: 118 SMTTVVFNANDEDPTVLVGGNLSVI-DGNVRIGNSEVFITEACEYVDSFLKFYPKIAIIL 176
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N++ +H+D F + +++ F +F Q++ G ++ GD + ++L +K K G
Sbjct: 177 NVEEDHLDYFSGLEQIEASFAKFASQVKPDGFVIANGDDE---NILKALKDVDKTKIYFG 233
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
N + + HD + G+++F+ L + + + +L++
Sbjct: 234 RNKNCQAII----HDEVYNSSGYATFS------------------LSMDDKFIGRFTLKV 271
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG HNVLN+ A I + S + +K + + GV RRF+ G + G +YD
Sbjct: 272 PGKHNVLNATAAILSAYV-------SKLPLDAIKTGIESYTGVGRRFEYKGEVNGIKVYD 324
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHPTEV A L AA+ + L +FQPHTY+R L D FA + +++D V++S +
Sbjct: 325 DYAHHPTEVAATLSAAKM-IKHHLLYTIFQPHTYTRTKELLDRFAVSFNDSDVVIISDI 382
>gi|416168393|ref|ZP_11607948.1| UDP-N-acetylmuramate-L-alanine ligase [Neisseria meningitidis
OX99.30304]
gi|25008815|sp|Q9JSZ8.2|MURC_NEIMA RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|325130849|gb|EGC53582.1| UDP-N-acetylmuramate-L-alanine ligase [Neisseria meningitidis
OX99.30304]
Length = 469
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 142/435 (32%), Positives = 218/435 (50%), Gaps = 50/435 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
KNR IHFVGIGG G+S +A++ GF+VSGSD ++ E L G ++ GH+
Sbjct: 2 MKNRVTNIHFVGIGGVGMSGIAEVLHNLGFKVSGSDQARNAATEHLGSLGIQVYPGHTAE 61
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
++ G D VV S+A+ ++N E++ A +P+ R LA+L + IA++G+H
Sbjct: 62 HVNGAD------VVVTSTAVKKENPEVVAALEQQIPVIPRALMLAELMRFRDGIAIAGTH 115
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S+ A +L A G D T ++G + + G G+ V EADE D FL L+P
Sbjct: 116 GKTTTTSLTASILGAAGLDPTFVIGGKL-NAAGTNARLGKGEYIVAEADESDASFLHLTP 174
Query: 251 SVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
++VVTN+D +H+D + + + F F+ ++ G +C DS+ R++L ++ +
Sbjct: 175 IMSVVTNIDEDHMDTYGHSVEKLHQAFIDFIHRMPFYGKAFLCIDSEHVRAILPKVSK-- 232
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPL 369
Y+ TYG D YA + NV + + + +
Sbjct: 233 --PYA---------------------TYGLDDTADIYATDI-ENVGAQMKFTVHVQMKGH 268
Query: 370 AQ----ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
Q + L +PG HNVLN+LA I L + S+ ++ L F GV RRF
Sbjct: 269 EQGSFEVVLNMPGRHNVLNALAAIGVAL-------EVGASVEAIQKGLLGFEGVGRRFQK 321
Query: 426 IGTIY-----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
G I + DD+ HHP E+ A L AAR +P K L+ FQPH Y+R L +DF
Sbjct: 322 YGDIKLPNGGTALLVDDYGHHPVEMAATLSAARGAYPEKRLVLAFQPHRYTRTRDLFEDF 381
Query: 481 ANALSEADQVVVSAV 495
L+ D +V++ V
Sbjct: 382 TKVLNTVDALVLTEV 396
>gi|345886976|ref|ZP_08838187.1| UDP-N-acetylmuramate-L-alanine ligase [Bilophila sp. 4_1_30]
gi|345037761|gb|EGW42273.1| UDP-N-acetylmuramate-L-alanine ligase [Bilophila sp. 4_1_30]
Length = 454
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 131/405 (32%), Positives = 211/405 (52%), Gaps = 43/405 (10%)
Query: 92 AKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIP 151
A++ L G+EV GSD+ ++ L GA++HIGH+ N+ N +V SSA+
Sbjct: 22 AEVLLNLGYEVHGSDMADGPVVQRLRSLGADIHIGHAAGNVDD------VNVLVKSSAVA 75
Query: 152 QDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLT 211
+DN E++ A+ G+P+ R LA+L IA++G+HGK++T S+ A + A D T
Sbjct: 76 EDNPEVVAARQKGIPVIPRAEMLAELMRLRTGIAIAGTHGKTSTTSLTAAIFDAASLDPT 135
Query: 212 AIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDA 271
I+G + + + G G+ + EADE DG FL L P + VVTN+D +H+D + +++A
Sbjct: 136 VIIGGRINAY-GANARLGQGEYLIAEADESDGSFLCLLPIINVVTNVDRDHLDHYGNQEA 194
Query: 272 VKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHD 331
+ F F+ QI G V+CGD LL ++K+
Sbjct: 195 IDEAFVSFMNQIPFYGLNVVCGDDPGVERLLPRVKR------------------------ 230
Query: 332 YKIITYGFSSFNDWYAESV-CPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIA 390
++TYGF S N AE + C + +I +G L +++L+ PG HN+LN+LA I
Sbjct: 231 -PVVTYGFGSGNHIRAEVLECGVINRFKVFI---KGEELGEVTLRQPGRHNILNALAAIG 286
Query: 391 TVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQ 450
L E C++ L++F GV RRF+ G + DD+ HHP E+ A L
Sbjct: 287 VALD------AGIEPHFCIE-GLARFDGVGRRFEHKGEKNDILVVDDYGHHPVEIAATLA 339
Query: 451 AARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
AR +P++ ++ FQPH +SR L +F + L D+++++ +
Sbjct: 340 TARTAYPDRRVVVAFQPHRFSRTQALFGEFCHVLGTVDKLLLTEI 384
>gi|313673682|ref|YP_004051793.1| UDP-N-acetylmuramate--l-alanine ligase [Calditerrivibrio
nitroreducens DSM 19672]
gi|312940438|gb|ADR19630.1| UDP-N-acetylmuramate--L-alanine ligase [Calditerrivibrio
nitroreducens DSM 19672]
Length = 460
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 140/419 (33%), Positives = 222/419 (52%), Gaps = 42/419 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+S +A++ ++++GSD+ ++ ++ L G + +GHS N++ D
Sbjct: 8 IHFVGIGGIGMSGIAEILHNLEYKITGSDISENANVQRLKSLGIKIFLGHSEENVKDVD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSA+ QDN E+ +A +P+ +R LA+L + VSGSHGK+TT+S
Sbjct: 67 -----LVVYSSAVKQDNPELKYALENYIPVIQRGEMLAELMRMKYSVVVSGSHGKTTTSS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A + + G + T ++G + + + +I G V EADE D FL L P+V+V+TN
Sbjct: 122 MIAEIFNSAGLNPTVVIGGRLNRNENNAIV-GKSDIMVAEADESDRSFLMLYPTVSVITN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D+EH++ ++D D VK F F ++ G +IC D ++ +K+
Sbjct: 181 IDFEHMESYKDFDDVKQSFAEFANKVPFYGANIICLDDPNVADIIPLLKK---------- 230
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPLAQISLQI 376
K +TYGFS+ D V ++G GS + + G+P +I L +
Sbjct: 231 ---------------KFVTYGFSARADIRGTDV--KIEGFGSSFNVSVHGKPWGRIKLSV 273
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG HNVLN+L I L +E I K L F GV RR + + D
Sbjct: 274 PGEHNVLNALGAIGAGLEF----DIPYEDI---KKGLEDFSGVQRRLTIRYDKDEIKVID 326
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+ HHPTE+ A L+A R + + LI +FQPH YSR +L ++F+ A +AD++ ++ +
Sbjct: 327 DYGHHPTEIIATLKAIRDAYDDHKLIVIFQPHRYSRTKLLMNEFSKAFFDADELFITDI 385
>gi|71066305|ref|YP_265032.1| UDP-N-acetylmuramate--L-alanine ligase [Psychrobacter arcticus
273-4]
gi|109892725|sp|Q4FQW0.1|MURC_PSYA2 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|71039290|gb|AAZ19598.1| UDP-N-acetylmuramate--L-alanine ligase [Psychrobacter arcticus
273-4]
Length = 479
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 138/424 (32%), Positives = 217/424 (51%), Gaps = 45/424 (10%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R +HF+GIGGSG+ +A++ QG++VSGSD+ S + L + G +++IGH NI
Sbjct: 20 RIQHLHFIGIGGSGMCGIAEVMNNQGYKVSGSDITESLVTKRLEQIGIDINIGHDSKNIA 79
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
D +V SSAI + N E+ A +P+ +R L +L + IA++G+HGK+
Sbjct: 80 NAD------VIVVSSAIDRSNPEVKAALEARLPVVRRADMLGELMRYRHGIAIAGAHGKT 133
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S+L ++ D T ++G + + G + + EADE D FL L P A
Sbjct: 134 TTTSLLTTMMAEGNLDPTYVIGGKLNASGKNAAL-GSSRFLIAEADESDASFLSLHPMAA 192
Query: 254 VVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
+VTN+D +H++ + + D +K+ + +FL+ + G V+CGD +++D I +
Sbjct: 193 IVTNIDQDHMETYGNSFDKLKAAYIQFLQNMPFYGLAVVCGDDPELYAMIDDIGR----- 247
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQI 372
++T+G FND A + +L PL ++
Sbjct: 248 --------------------PVLTFGLEPFNDVQAVDLVTEGTKTHFTVLRRDHEPL-RL 286
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY-- 430
+L IPGVHNV N+LA I T+ D+ A + L KF GV RRF+ ++
Sbjct: 287 TLNIPGVHNVYNALAAI----TMATDEGVDD---AAITRALQKFEGVGRRFEQHASVTID 339
Query: 431 --GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
+ DD+ HHP EV A ++AARQ FP + L+ +FQPH YSR DDF LS D
Sbjct: 340 DGDVLLIDDYGHHPKEVDATIKAARQSFPERRLVMLFQPHRYSRTRDCFDDFVEVLSSVD 399
Query: 489 QVVV 492
++++
Sbjct: 400 ELLL 403
>gi|383501988|ref|YP_005415347.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia australis str.
Cutlack]
gi|378932999|gb|AFC71504.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia australis str.
Cutlack]
Length = 478
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 141/427 (33%), Positives = 216/427 (50%), Gaps = 48/427 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG G+S +A++ G++V GSDLV + + L G + +GH+ +I
Sbjct: 16 IHFLGIGGVGMSGIAEILHNLGYKVQGSDLVENYNTKRLESYGIKIFLGHAKQHITN--- 72
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ VV SSAI +N EI A +PI +R LA+L +AVSGSHGK+TT S
Sbjct: 73 ---VSYVVISSAINSNNPEITEALERKIPIIRRAEMLAELMRLKCSVAVSGSHGKTTTTS 129
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVT 256
++A + +A G T I G + + Y G N+++ EADE D F+ + ++A++T
Sbjct: 130 LIACLFEAAGLCPTVINGGIINNKSTNA--YLGSSNYLIAEADESDATFIHIPSTIAIIT 187
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY--- 313
N+D EH+D ++D + + F+ F+ + G V C D + R L+D I + + Y
Sbjct: 188 NIDPEHLDYYKDFETLIGAFKSFITNLPFYGFAVCCIDHKIVRKLVDDITERKIVTYGID 247
Query: 314 ---SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
+ + N ++D+ D KI PNV G + +
Sbjct: 248 SEDAHIIAFNINTDIASSTFDVKI---------------SLPNVLGTT---------IIE 283
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+I++ PG HN+LNSLA IA + L I +K + F GV RRF +
Sbjct: 284 KITIPTPGRHNILNSLAAIAVGIEL-------DFGIKAIKNGFNNFKGVKRRFTKVAEYN 336
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQ--RFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
+ DD+AHHP E++A L AR N +IA+FQPH YSR+ L DDF ++AD
Sbjct: 337 KAVVIDDYAHHPEEIKATLATARNIADKQNGKVIAIFQPHRYSRMQHLFDDFMRCFNDAD 396
Query: 489 QVVVSAV 495
V ++ +
Sbjct: 397 MVYITDI 403
>gi|317484864|ref|ZP_07943756.1| UDP-N-acetylmuramate-alanine ligase [Bilophila wadsworthia 3_1_6]
gi|316923910|gb|EFV45104.1| UDP-N-acetylmuramate-alanine ligase [Bilophila wadsworthia 3_1_6]
Length = 455
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 131/405 (32%), Positives = 211/405 (52%), Gaps = 43/405 (10%)
Query: 92 AKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIP 151
A++ L G+EV GSD+ ++ L GA++HIGH+ N+ N +V SSA+
Sbjct: 23 AEVLLNLGYEVHGSDMADGPVVQRLRSLGADIHIGHAAGNVDD------VNVLVKSSAVA 76
Query: 152 QDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLT 211
+DN E++ A+ G+P+ R LA+L IA++G+HGK++T S+ A + A D T
Sbjct: 77 EDNPEVVAARQKGIPVIPRAEMLAELMRLRTGIAIAGTHGKTSTTSLTAAIFDAASLDPT 136
Query: 212 AIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDA 271
I+G + + + G G+ + EADE DG FL L P + VVTN+D +H+D + +++A
Sbjct: 137 VIIGGRINAY-GANARLGQGEYLIAEADESDGSFLCLLPIINVVTNVDRDHLDHYGNQEA 195
Query: 272 VKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHD 331
+ F F+ QI G V+CGD LL ++K+
Sbjct: 196 IDEAFVSFMNQIPFYGLNVVCGDDPGVERLLPRVKR------------------------ 231
Query: 332 YKIITYGFSSFNDWYAESV-CPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIA 390
++TYGF S N AE + C + +I +G L +++L+ PG HN+LN+LA I
Sbjct: 232 -PVVTYGFGSGNHIRAEVLECGVINRFKVFI---KGEELGEVTLRQPGRHNILNALAAIG 287
Query: 391 TVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQ 450
L E C++ L++F GV RRF+ G + DD+ HHP E+ A L
Sbjct: 288 VALD------AGIEPHFCIE-GLARFGGVGRRFEHKGEKNDILVVDDYGHHPVEIAATLA 340
Query: 451 AARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
AR +P++ ++ FQPH +SR L +F + L D+++++ +
Sbjct: 341 TARTAYPDRRVVVAFQPHRFSRTQALFGEFCHVLGTVDKLLLTEI 385
>gi|433608648|ref|YP_007041017.1| UDP-N-acetylmuramate-L-alanine ligase [Saccharothrix espanaensis
DSM 44229]
gi|407886501|emb|CCH34144.1| UDP-N-acetylmuramate-L-alanine ligase [Saccharothrix espanaensis
DSM 44229]
Length = 475
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 149/423 (35%), Positives = 213/423 (50%), Gaps = 48/423 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H VGIGG+G+S +A++ L +G +VSGSD S + L GA + +GH S++ G
Sbjct: 18 VHLVGIGGAGMSGIARILLARGAQVSGSDAKDSRTVLALRAQGAAIAVGHHGSHLDQLIG 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
P AVV S+AI +DN E+L A+ V + +R LA L + + V+G+HGK++T S
Sbjct: 78 G--PTAVVVSTAIREDNPELLAARERDVVVLRRAEALAALMLDHRVACVAGTHGKTSTTS 135
Query: 198 MLAYVLK--------AMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLS 249
ML VL+ A+G DL GA+ Q G G FV EADE DG FL +
Sbjct: 136 MLTVVLQHCRMDPSFAIGGDLNE-SGANAHQ--------GAGGVFVAEADESDGSFLFFA 186
Query: 250 PSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
PSVAVVTN++ +H+D +A ++F FL++I G L++C D A +L +
Sbjct: 187 PSVAVVTNVEADHLDHHGTVEAYVAVFDSFLERIDPDGVLIVCVDDPGAAALAGRAAARG 246
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPL 369
+I YG ++ A V + G + E
Sbjct: 247 ----------------------LRIRPYGRTATGPGAARLVDFTPEDGGGLAVVEVDGQT 284
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
+ + +PG H N++A + L L + C+ L+ F GV RRF+ G
Sbjct: 285 LDVRVSVPGEHMAGNAIAALVAALEL-------GAGLECVLEGLAAFGGVRRRFEFKGRS 337
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
G +YDD+AHHPTEV A L AAR + L+ VFQPH YSR + D+F AL AD+
Sbjct: 338 GGVRVYDDYAHHPTEVAAQLTAARPVAGDGKLVVVFQPHLYSRTRLFADEFGTALGLADE 397
Query: 490 VVV 492
VVV
Sbjct: 398 VVV 400
>gi|433472804|ref|ZP_20430173.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 97021]
gi|433481239|ref|ZP_20438508.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis
2006087]
gi|433483320|ref|ZP_20440556.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis
2002038]
gi|433485453|ref|ZP_20442658.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 97014]
gi|432212243|gb|ELK68185.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 97021]
gi|432218537|gb|ELK74394.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis
2006087]
gi|432222690|gb|ELK78477.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis
2002038]
gi|432224365|gb|ELK80131.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 97014]
Length = 468
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 141/435 (32%), Positives = 218/435 (50%), Gaps = 50/435 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
KNR IHFVGIGG G+S +A++ GF+VSGSD ++ E L G ++ GH+
Sbjct: 1 MKNRVTNIHFVGIGGVGMSGIAEVLHNLGFKVSGSDQARNAATEHLGSLGIQVYPGHTAE 60
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
++ G D VV S+A+ ++N E++ A +P+ R LA+L + IA++G+H
Sbjct: 61 HVNGAD------VVVTSTAVKKENPEVVAALEQQIPVIPRALMLAELMRFRDGIAIAGTH 114
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S+ A +L A G D T ++G + + G G+ V EADE D FL L+P
Sbjct: 115 GKTTTTSLTASILGAAGLDPTFVIGGKL-NAAGTNARLGKGEYIVAEADESDASFLHLTP 173
Query: 251 SVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
++V+TN+D +H+D + + + F F+ ++ G +C DS+ R++L ++ +
Sbjct: 174 IMSVITNIDEDHMDTYGHSVEKLHQAFIDFIHRMPFYGKAFLCIDSEHVRAILPKVSK-- 231
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPL 369
Y+ TYG D YA + NV + + + +
Sbjct: 232 --PYA---------------------TYGLDDTADIYATDI-ENVGAQMKFTVHVQMKGH 267
Query: 370 AQ----ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
Q + L +PG HNVLN+LA I L + S+ ++ L F GV RRF
Sbjct: 268 EQGSFEVVLNMPGRHNVLNALAAIGVAL-------EVGASVEAIQKGLLGFEGVGRRFQK 320
Query: 426 IGTIY-----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
G I + DD+ HHP E+ A L AAR +P K L+ FQPH Y+R L +DF
Sbjct: 321 YGDIKLPNGGTALLVDDYGHHPVEMAATLSAARGAYPEKRLVLAFQPHRYTRTRDLFEDF 380
Query: 481 ANALSEADQVVVSAV 495
L+ D +V++ V
Sbjct: 381 TKVLNTVDALVLTEV 395
>gi|148828299|ref|YP_001293052.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus influenzae
PittGG]
gi|166224694|sp|A5UIR3.1|MURC_HAEIG RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|148719541|gb|ABR00669.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus influenzae
PittGG]
Length = 475
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 144/465 (30%), Positives = 233/465 (50%), Gaps = 68/465 (14%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+ R IHF+GIGG+G+S +A++ L +G+++SGSD+ + L +AGA ++IGH
Sbjct: 11 IIPEMRRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGH 70
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
+ +I+G + VV SSAI DN E++ +K +P+ +R LA++ + IAV+
Sbjct: 71 AAEHIKG------ASVVVVSSAIKDDNPELVASKQKRIPVIQRAQMLAEIMRFRHGIAVA 124
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEAD 239
G+HGK+TT +M++ + D P F +G + GKN + EAD
Sbjct: 125 GTHGKTTTTAMISMIYTQAKLD---------PTFVNGGLVKSAGKNAHLGASRYLIAEAD 175
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCA 298
E D FL L P V+VVTN++ +H+D +E D + +K+ + +FL + G V+C D
Sbjct: 176 ESDASFLHLQPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLPFYGLAVMCADDPVL 235
Query: 299 RSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS 358
L+ ++ + ++ITYGFS D+ E G
Sbjct: 236 MELVPKVGR-------------------------QVITYGFSEQADYRIEDYEQTGFQGH 270
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
+ C + + L +PG HN LN+ A +A K + + A L+ L+ F G
Sbjct: 271 YTVFCPNNERI-NVLLNVPGKHNALNATAALAVA------KEEGIANEAILE-ALADFQG 322
Query: 419 VSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
RRFD +G + DD+ HHPTEV ++AAR+ + +K ++ +FQPH YSR
Sbjct: 323 AGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVDVTIKAAREGWGDKRIVMIFQPHRYSRTR 382
Query: 475 VLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
L DDF LS D +++ L ++A ++ A + +C
Sbjct: 383 DLFDDFVQVLSLVDALIM-------LDVYAAGEAPIVGADSKSLC 420
>gi|68249688|ref|YP_248800.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus influenzae
86-028NP]
gi|260581812|ref|ZP_05849608.1| UDP-N-acetylmuramate-alanine ligase [Haemophilus influenzae NT127]
gi|386266158|ref|YP_005829650.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus influenzae
R2846]
gi|81335883|sp|Q4QLF7.1|MURC_HAEI8 RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|68057887|gb|AAX88140.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus influenzae
86-028NP]
gi|260095005|gb|EEW78897.1| UDP-N-acetylmuramate-alanine ligase [Haemophilus influenzae NT127]
gi|309973394|gb|ADO96595.1| UDP-N-acetylmuramate--L-alanine ligase [Haemophilus influenzae
R2846]
Length = 475
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 144/465 (30%), Positives = 234/465 (50%), Gaps = 68/465 (14%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
I+ R IHF+GIGG+G+S +A++ L +G+++SGSD+ + L +AGA ++IGH
Sbjct: 11 IIPEMRRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGH 70
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
+ +I+G + VV SSAI DN E++ +K +P+ +R LA++ + IAV+
Sbjct: 71 AEEHIKG------ASVVVVSSAIKDDNPELVASKQKRIPVIQRAQMLAEIMRFRHGIAVA 124
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEAD 239
G+HGK+TT +M++ + D P F +G + GKN + EAD
Sbjct: 125 GTHGKTTTTAMISMIYTQAKLD---------PTFVNGGLVKSAGKNAHLGASRYLIAEAD 175
Query: 240 EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCA 298
E D FL L P V+VVTN++ +H+D +E D + +K+ + +FL + G V+C D
Sbjct: 176 ESDASFLHLQPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLPFYGLAVMCADDPVL 235
Query: 299 RSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS 358
L+ ++ + ++ITYGFS D+ E G
Sbjct: 236 MELVPKVGR-------------------------QVITYGFSEQADYRIEDYEQTGFQGH 270
Query: 359 DYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
++C + + L +PG HN LN+ A +A K + + A L+ L+ F G
Sbjct: 271 YTVICPNNERI-NVLLNVPGKHNALNATAALAVA------KEEGIANEAILE-ALADFQG 322
Query: 419 VSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
RRFD +G + DD+ HHPTEV ++AAR+ + +K ++ +FQPH YSR
Sbjct: 323 AGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVDVTIKAAREGWGDKRIVMIFQPHRYSRTR 382
Query: 475 VLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVIC 519
L DDF LS D +++ L ++A ++ A + +C
Sbjct: 383 DLFDDFVQVLSLVDALIM-------LDVYAAGEAPIVGADSKSLC 420
>gi|421538571|ref|ZP_15984746.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 93003]
gi|402316241|gb|EJU51790.1| UDP-N-acetylmuramate--alanine ligase [Neisseria meningitidis 93003]
Length = 468
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 142/435 (32%), Positives = 218/435 (50%), Gaps = 50/435 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
KNR IHFVGIGG G+S +A++ GF+VSGSD ++ E L G ++ GH+
Sbjct: 1 MKNRVTNIHFVGIGGVGMSGIAEVLHNLGFKVSGSDQARNAATEHLGSLGIQVYPGHTAE 60
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
++ G D VV S+A+ ++N E++ A +P+ R LA+L + IA++G+H
Sbjct: 61 HVNGAD------VVVTSTAVKKENPEVVAALEQQIPVIPRALMLAELMRFRDGIAIAGTH 114
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S+ A +L A G D T ++G + + G G+ V EADE D FL L+P
Sbjct: 115 GKTTTTSLTASILGAAGLDPTFVIGGKL-NAAGTNARLGKGEYIVAEADESDASFLHLTP 173
Query: 251 SVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
++VVTN+D +H+D + + + F F+ ++ G +C DS+ R++L ++ +
Sbjct: 174 IMSVVTNIDEDHMDTYGHSVEKLHQAFIDFIHRMPFYGKAFLCIDSEHVRAILPKVSK-- 231
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPL 369
Y+ TYG D YA + NV + + + +
Sbjct: 232 --PYA---------------------TYGLDDTADIYATDI-ENVGAQMKFTVHVQMKGH 267
Query: 370 AQ----ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
Q + L +PG HNVLN+LA I L + S+ ++ L F GV RRF
Sbjct: 268 EQGSFEVVLNMPGRHNVLNALAAIGVAL-------EVGASVEAIQKGLLGFEGVGRRFQK 320
Query: 426 IGTIY-----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
G I + DD+ HHP E+ A L AAR +P K L+ FQPH Y+R L +DF
Sbjct: 321 YGDIKLPNGGTALLVDDYGHHPVEMVATLSAARGAYPEKRLVLAFQPHRYTRTRDLFEDF 380
Query: 481 ANALSEADQVVVSAV 495
L+ D +V++ V
Sbjct: 381 TKVLNTVDALVLTEV 395
>gi|331006870|ref|ZP_08330123.1| UDP-N-acetylmuramate-alanine ligase [gamma proteobacterium
IMCC1989]
gi|330419321|gb|EGG93734.1| UDP-N-acetylmuramate-alanine ligase [gamma proteobacterium
IMCC1989]
Length = 491
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 155/452 (34%), Positives = 233/452 (51%), Gaps = 69/452 (15%)
Query: 67 CIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG 126
C+ + + K IHF+GIGG+G+S +A++ L QG+ +SGSDL S ++ L GA + IG
Sbjct: 8 CVPEMRRIK-RIHFIGIGGAGMSGIAEVLLNQGYSISGSDLRGSVVVDRLTAMGATVFIG 66
Query: 127 HSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAV 186
H + N+ G D +V SSA+ +DN EI+ A+ +P+ +R LA+L + IAV
Sbjct: 67 HHLENVIGAD------VIVNSSAVDEDNPEIVSAREHRIPVVRRAEMLAELMRYRHGIAV 120
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
+G+HGK+TT S++ + A G D T ++G V + G + + EADE D FL
Sbjct: 121 AGTHGKTTTTSLITSIFAAAGLDPTFVIGGLVHSTGSNAKL-GTSQYLIAEADESDASFL 179
Query: 247 GLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 305
L P V+V+TN+D +H+D +E D +K F F+ + G LV+CGD + LL I
Sbjct: 180 HLQPMVSVITNIDADHMDTYEGDFSRLKKTFVEFIHNLPFYGLLVVCGDDPVIQELLPDI 239
Query: 306 KQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYA-----ESVCPNVQGGSDY 360
+ ++ITYGFS ND+ A E + SD+
Sbjct: 240 SR-------------------------QVITYGFSEDNDYQAIAVEQEKTQTRFKVKSDH 274
Query: 361 ILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVS 420
+ G + I L +PG HNVLN+LA IA + D++ +SI + L F GV
Sbjct: 275 L--AEGEEI-DIQLNMPGNHNVLNALAAIAIAV----DEKIEVQSI---QKGLLNFEGVG 324
Query: 421 RRFDL---------IGTIYG-----------CHIYDDFAHHPTEVRAVLQAARQRFPNKA 460
RRF + +G G + DD+ HHP EV A +QA R +P K
Sbjct: 325 RRFQIYGDYPVGNSVGNPVGDSVGNPDESGTAMLVDDYGHHPREVDATIQAVRAGWPEKR 384
Query: 461 LIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
L+ ++QPH YSR L +DF + LS+ D +++
Sbjct: 385 LVMIYQPHRYSRTRDLYEDFVDVLSKVDVLIL 416
>gi|258645243|ref|ZP_05732712.1| UDP-N-acetylmuramate--alanine ligase [Dialister invisus DSM 15470]
gi|260402593|gb|EEW96140.1| UDP-N-acetylmuramate--alanine ligase [Dialister invisus DSM 15470]
Length = 469
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 150/453 (33%), Positives = 235/453 (51%), Gaps = 52/453 (11%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
HFVG+GG G+ ALA++ +++G VSGSD+ S+ ++ L GA + IGH NI D
Sbjct: 11 HFVGLGGVGMCALARILIEKGITVSGSDVSDSAVLQELRNKGAAVFIGHKRENINNAD-- 68
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
+V SSAI DN E+ AKS +PI+ R LA + + IAV+G+HGKSTT++M
Sbjct: 69 ----VLVVSSAIGMDNPELQEAKSRDLPIFHRSDVLAAIFKWGKGIAVAGAHGKSTTSAM 124
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
+ + D T ++G + G+ G G++ + EADE DG FL + ++VVTN+
Sbjct: 125 IGQIFHVAKMDPTIVLGG-FTDYLKGNSCLGHGEHIIAEADESDGSFLKFATFLSVVTNI 183
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQIRV-GGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+ +H+D + + ++ F FL + G ++C DS+ +++L QIK+ S G+
Sbjct: 184 EDDHLDHYGTVENIRKAFVEFLNHVTYKDGGAIVCIDSEGVQAILPQIKKKV---ISFGI 240
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
N S++ YK F ++ Y E L +SLQIP
Sbjct: 241 --NDSAEYRAVNKRYKKQNMLFDVYH--YKEK-------------------LGTVSLQIP 277
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD 437
G+HNV ++L I L S ++ LS F GV RRF +G I DD
Sbjct: 278 GIHNVRDALGAIVVALYCGISFETSVKA-------LSVFSGVKRRFQTKMKEHGVWIVDD 330
Query: 438 FAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAVLV 497
+AHHPTE+ A L+AA++ ++ +I FQPH YSR +L+++F+ A +AD ++
Sbjct: 331 YAHHPTEIAATLKAAKEMGRHR-VICAFQPHRYSRTKLLQEEFSEAFIDAD-------VL 382
Query: 498 FWLIIFAVSSFWLIMAINSVIC--IVRSMLPEK 528
F+ I+A I I+ + +V+ P+K
Sbjct: 383 FFTDIYAAGE-SPIQGIDGTLIPNLVKRRFPDK 414
>gi|93006855|ref|YP_581292.1| UDP-N-acetylmuramate--L-alanine ligase [Psychrobacter
cryohalolentis K5]
gi|109892726|sp|Q1Q945.1|MURC_PSYCK RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|92394533|gb|ABE75808.1| UDP-N-acetylmuramate--L-alanine ligase [Psychrobacter
cryohalolentis K5]
Length = 479
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 138/424 (32%), Positives = 216/424 (50%), Gaps = 45/424 (10%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R +HF+GIGGSG+ +A++ QG++VSGSD+ S + L + G ++ IGH NI
Sbjct: 20 RIQHLHFIGIGGSGMCGIAEVMNNQGYQVSGSDITESLVTKRLAQIGIDIAIGHDSKNIA 79
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
D +V SSAI + N E+ A +P+ +R L +L + IA++G+HGK+
Sbjct: 80 NAD------VIVVSSAIDRSNPEVKAALEARLPVVRRADMLGELMRYRHGIAIAGAHGKT 133
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT S+L ++ D T ++G + + G + + EADE D FL L P A
Sbjct: 134 TTTSLLTTMMAEGNLDPTYVIGGKLNASGKNAAL-GSSRFLIAEADESDASFLSLHPMAA 192
Query: 254 VVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
+VTN+D +H++ + + D +K+ + +FL+ + G V+CGD +++D I +
Sbjct: 193 IVTNIDQDHMETYGNSFDKLKAAYIQFLQNMPFYGLAVVCGDDPELYAMIDDIGR----- 247
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQI 372
++T+G FND A + +L PL ++
Sbjct: 248 --------------------PVLTFGLEPFNDVQAVDLVTEGTKTHFTVLRRDHEPL-RL 286
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY-- 430
+L IPGVHNV N+LA I T+ D+ A + L KF GV RRF+ ++
Sbjct: 287 TLNIPGVHNVYNALAAI----TMATDEGVDD---AAITRALQKFEGVGRRFEQHASVEID 339
Query: 431 --GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
+ DD+ HHP EV A ++AARQ FP + L+ +FQPH YSR DDF LS D
Sbjct: 340 DGNVLLIDDYGHHPKEVDATIKAARQSFPERRLVMMFQPHRYSRTRDCFDDFVEVLSSVD 399
Query: 489 QVVV 492
++++
Sbjct: 400 ELLL 403
>gi|344941235|ref|ZP_08780523.1| UDP-N-acetylmuramate--L-alanine ligase [Methylobacter tundripaludum
SV96]
gi|344262427|gb|EGW22698.1| UDP-N-acetylmuramate--L-alanine ligase [Methylobacter tundripaludum
SV96]
Length = 480
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 144/424 (33%), Positives = 211/424 (49%), Gaps = 46/424 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HFVGIGG+G+S +A++ G++VSGSD+ S E L G ++IGH NI D
Sbjct: 19 VHFVGIGGTGMSGIAEVLSNLGYQVSGSDIKESVVTERLAGLGVTINIGHKRENIADVD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VVASSAI + N EI A +P+ R LA+L IAV+G+HGK+TT S
Sbjct: 78 -----VVVASSAIDRSNEEIDEAYIQRIPVIPRAEMLAELMRFRFGIAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+ A +L G D T ++G + + G G V EADE D FL L P +A+VTN
Sbjct: 133 LTASILAEGGLDPTFVIGGRLNSAGSNAKL-GLGHYLVAEADESDASFLYLQPMMAIVTN 191
Query: 258 LDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ +E +K F+ FL + G V+C D + R++L +I +
Sbjct: 192 IDQDHMATYEGSYQRLKDTFKEFLHHLPFYGLAVMCLDDEGVRAVLPEISK--------- 242
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+ TYG D A ++ S ++ P Q++L +
Sbjct: 243 ----------------PVTTYGVHEDADVRAVNIKQEGMHTSFDVIRRGDYPPLQVTLNM 286
Query: 377 PGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----G 431
PG HN+LN+LA I+ L +GD A + L F G+ RRF L G +
Sbjct: 287 PGWHNMLNALAAISVATKLAVGD--------AAIIKSLGAFKGIGRRFQLNGDLPMGEGK 338
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+ HHP E+ A L+A RQ +P++ + VFQPH Y+R L +DF LS D ++
Sbjct: 339 LTLVDDYGHHPREIAATLEALRQAWPDRRSVIVFQPHRYTRTRDLFEDFVQVLSTVDVLI 398
Query: 492 VSAV 495
+ V
Sbjct: 399 LMDV 402
>gi|386867346|ref|YP_006280340.1| UDP-N-acetylmuramate--L-alanine ligase [Bifidobacterium animalis
subsp. animalis ATCC 25527]
gi|385701429|gb|AFI63377.1| UDP-N-acetylmuramate--alanine ligase [Bifidobacterium animalis
subsp. animalis ATCC 25527]
Length = 513
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 144/433 (33%), Positives = 217/433 (50%), Gaps = 38/433 (8%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G HF+GIGG+G+S LA++ +QG V GSD + E L G + N+Q
Sbjct: 26 GNTHFIGIGGAGMSVLAEMLHEQGVPVDGSDRKPGAKTERLESLGIPVQFTQRAENVQD- 84
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
VV SSAI DN EI+ A + G + R LA L + + V+G+HGK+TT
Sbjct: 85 -----AQVVVYSSAIKPDNPEIVAAVANGAQLVHRSDILALLMNGKHAVTVAGAHGKTTT 139
Query: 196 ASMLAYVLKAMGD----DLTAIVGAHVPQFPDGSIFYGG--GKNFVL--EADEYDGCFLG 247
+S+LA++L G D + +G + Q PDG+ GG GK VL EADE DG F
Sbjct: 140 SSLLAHILTHAGTGELADPSYAIGGSI-QGPDGTTLDGGHVGKGTVLVAEADESDGSFAK 198
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P + ++TN + +H+D + E+ + F + R +++C D A ++L +
Sbjct: 199 YHPDIEIITNAEADHLDHYHTEENYHAAFADHITHARRA--VIMCVDDAGALAVLRSLAP 256
Query: 308 DTGLKYSGGVVSNQSSDLWG--QGHDYKIITYGFSSFNDWYAESVC--PNVQGGSDYILC 363
+ K S ++D G G + I S N V P G+D L
Sbjct: 257 EDARKVI--AYSTHTADELGDLNGATFVHIASEHESANSGTENFVIDIPAALAGADVALP 314
Query: 364 ERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRF 423
+SL+IPG+HN N+ A I + L D ++ + F+G +RRF
Sbjct: 315 --------VSLRIPGLHNARNATAAILAAVLLGMDAERAAAAAGT-------FLGANRRF 359
Query: 424 DLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANA 483
+ GT+ + DD+AHHPTE+ A+L+AAR+R+P+ L +FQPH +SR +FA+A
Sbjct: 360 QIRGTVSDITVVDDYAHHPTEITALLKAARRRYPDSQLHVLFQPHLFSRTQFFAQEFADA 419
Query: 484 LSEADQVVVSAVL 496
LS AD V+V+ +
Sbjct: 420 LSLADDVIVTGIF 432
>gi|255326230|ref|ZP_05367316.1| UDP-N-acetylmuramate--alanine ligase [Rothia mucilaginosa ATCC
25296]
gi|255296684|gb|EET76015.1| UDP-N-acetylmuramate--alanine ligase [Rothia mucilaginosa ATCC
25296]
Length = 495
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 142/431 (32%), Positives = 215/431 (49%), Gaps = 61/431 (14%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G +HF+GIGG+G+SA+A L L+ G VSGSD S+ +E L AGA + + NI
Sbjct: 25 GRVHFIGIGGAGMSAIAALMLQAGATVSGSDRAESATVESLRAAGARVGVPQQAENIVDV 84
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
D VV S+AI +DN E++ A++ G+ + R LA + + ++AV+G+HGKSTT
Sbjct: 85 D------TVVISTAIREDNPELVAARAQGLRVLHRSEALAAVMGESQVVAVAGTHGKSTT 138
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN-----------FVLEADEYDGC 244
+SM++ + +G P F G++ G G N FV EADE DG
Sbjct: 139 SSMISVMFDQLGAQ---------PSFAVGTVIAGRGTNAHLGAQGPETIFVAEADESDGS 189
Query: 245 FLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 304
F+ P++AVVTN++ +H+D +E ++ V F RF+ + G +V C D A L +
Sbjct: 190 FVRYCPAIAVVTNVEPDHLDFYETDERVFEAFNRFVGSLAPNGVVVTCADDAGAADLAAR 249
Query: 305 IKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYIL-- 362
+ + GV ++TYG ++ D + S ++
Sbjct: 250 SR-------AAGV---------------PVVTYGEAADADLRISEITSAGSSSSSHLSWS 287
Query: 363 --CE--RGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMG 418
C R ++L++PG+HN LN+ A A+ L S A + L+ F+G
Sbjct: 288 FECRGVRYEGEQDLALKVPGIHNQLNASAAFASALI-------SGYEAADIARALADFVG 340
Query: 419 VSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKD 478
RRF L G + G ++DD+AHHPTEV LQ R L +FQPH +SR
Sbjct: 341 ADRRFTLRGEVAGVKVFDDYAHHPTEVFRALQTGRTVADGHNLYVIFQPHLFSRTREFAK 400
Query: 479 DFANALSEADQ 489
+FA ALS +D+
Sbjct: 401 EFAQALSMSDR 411
>gi|390167633|ref|ZP_10219615.1| UDP-N-acetylmuramate--L-alanine ligase [Sphingobium indicum B90A]
gi|389589802|gb|EIM67815.1| UDP-N-acetylmuramate--L-alanine ligase [Sphingobium indicum B90A]
Length = 473
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 142/406 (34%), Positives = 214/406 (52%), Gaps = 49/406 (12%)
Query: 99 GFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEIL 158
G++V GSD+ +EGL + G + IGH N+ D + VV S+AI + N E+
Sbjct: 32 GYKVQGSDVAEGYVVEGLRKKGIPVMIGHKAENL--GDAA----VVVTSTAIKKGNPEVD 85
Query: 159 HAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHV 218
A +P+ +R LA+L + +AV+G+HGK+TT SM+A +L A G D T I G +
Sbjct: 86 LALEKRIPVIRRAEMLAELMRLKSTVAVAGTHGKTTTTSMVAALLDAGGVDPTVINGGII 145
Query: 219 PQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRR 278
+ + G + V+EADE DG FL L ++AVVTN+D EH+D + D VK F
Sbjct: 146 NSYGSNARL-GNSEWMVVEADESDGSFLRLDGTLAVVTNIDPEHLDHYGSFDKVKDAFVE 204
Query: 279 FLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYG 338
F++ + G ++C D +++L +++ D +I+TYG
Sbjct: 205 FVENVPFYGAAMLCLDHPEVQAILPRVQ------------------------DRRIVTYG 240
Query: 339 FSSFNDWYAESVCPNVQGGS--DYILCERG---RPLAQISLQIPGVHNVLNSLAVIATVL 393
FS+ D E+V P + GG+ D + ER R + I + +PG HNVLN++A I L
Sbjct: 241 FSAQADIRGENVQP-IPGGNRFDVQIRERDGSLRRIEGIEMPMPGRHNVLNAMAAIGVAL 299
Query: 394 TLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG----CHIYDDFAHHPTEVRAVL 449
+ D A ++ +KF GV RRF +G I + DD+ HHP E++AVL
Sbjct: 300 QMGIDD-------ATIQTGFAKFGGVKRRFTKVGEIAAGGGIATVIDDYGHHPVEIKAVL 352
Query: 450 QAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
AAR+ + +IAV QPH ++RL L DDF A ++AD V + V
Sbjct: 353 AAAREGAKGR-VIAVVQPHRFTRLRDLMDDFQQAFNDADIVYAAPV 397
>gi|416159700|ref|ZP_11605964.1| UDP-N-acetylmuramate-L-alanine ligase [Neisseria meningitidis
N1568]
gi|325128839|gb|EGC51698.1| UDP-N-acetylmuramate-L-alanine ligase [Neisseria meningitidis
N1568]
Length = 469
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 141/435 (32%), Positives = 218/435 (50%), Gaps = 50/435 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
KNR IHFVGIGG G+S +A++ GF+VSGSD ++ E L G ++ GH+
Sbjct: 2 MKNRVTNIHFVGIGGVGMSGIAEVLHNLGFKVSGSDQARNAATEHLGSLGIQVYPGHTAE 61
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
++ G D VV S+A+ ++N E++ A +P+ R LA+L + IA++G+H
Sbjct: 62 HVNGAD------VVVTSTAVKKENPEVVAALEQQIPVIPRALMLAELMRFRDGIAIAGTH 115
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S+ A +L A G D T ++G + + G G+ V EADE D FL L+P
Sbjct: 116 GKTTTTSLTASILGAAGLDPTFVIGGKL-NAAGTNARLGKGEYIVAEADESDASFLHLTP 174
Query: 251 SVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
++V+TN+D +H+D + + + F F+ ++ G +C DS+ R++L ++ +
Sbjct: 175 IMSVITNIDEDHMDTYGHSVEKLHQAFIDFIHRMPFYGKAFLCIDSEHVRAILPKVSK-- 232
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPL 369
Y+ TYG D YA + NV + + + +
Sbjct: 233 --PYA---------------------TYGLDDTADIYATDI-ENVGAQMKFTVHVQMKGH 268
Query: 370 AQ----ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
Q + L +PG HNVLN+LA I L + S+ ++ L F GV RRF
Sbjct: 269 EQGSFEVVLNMPGRHNVLNALAAIGVAL-------EVGASVEAIQKGLLGFEGVGRRFQK 321
Query: 426 IGTIY-----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
G I + DD+ HHP E+ A L AAR +P K L+ FQPH Y+R L +DF
Sbjct: 322 YGDIKLPNGGTALLVDDYGHHPVEMAATLSAARGAYPEKRLVLAFQPHRYTRTRDLFEDF 381
Query: 481 ANALSEADQVVVSAV 495
L+ D +V++ V
Sbjct: 382 TKVLNTVDALVLTEV 396
>gi|94970655|ref|YP_592703.1| UDP-N-acetylmuramate--L-alanine ligase [Candidatus Koribacter
versatilis Ellin345]
gi|166222948|sp|Q1IKH1.1|MURC_ACIBL RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|94552705|gb|ABF42629.1| UDP-N-acetylmuramate--L-alanine ligase [Candidatus Koribacter
versatilis Ellin345]
Length = 468
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 152/420 (36%), Positives = 221/420 (52%), Gaps = 49/420 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+S +A++ L G++VSGSDL S+ E L GA + GH SN++G +
Sbjct: 8 IHFVGIGGIGMSGIAEVLLNLGYKVSGSDLKPSAVTERLESLGAKVFEGHRASNVEGAE- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSAI N E+ A + +P+ +R LA+L IA++G HGK+TT S
Sbjct: 67 -----VVVTSSAIDSRNPEVAEAHANHIPVIQRAEMLAELMRLKYGIAIAGMHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A VL D T IVG V + G V EADE D FL L AVVTN
Sbjct: 122 MVAAVLAGGELDPTVIVGGRVDAMGSNARL-GKSHYLVAEADESDRSFLKLWFIHAVVTN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D EH+D + D + V+ F F+ ++ G +V C D++ R++L ++++
Sbjct: 181 IDREHMDTYHDMEDVERTFVEFMDRVPFYGMVVACNDNEPLRAILPRVRR---------- 230
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESV-CPNVQ---GGSDYILCE-RGRPLAQI 372
+I+TYG + +D+ V C + Q G + E RG+ L +
Sbjct: 231 ---------------RIVTYGTTEGSDFLIRCVPCDSEQLLLGFLNRFSVEYRGKSLGEF 275
Query: 373 SLQIPGVHNVLNSLAVIA--TVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
L++PG+HNV N+ A IA L + DK ++ L++F GV RRF L G
Sbjct: 276 LLRVPGLHNVRNATAAIAIGVGLDIPADK---------IRAALAEFRGVDRRFQLKGKAN 326
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHPTE+RA L AA+Q + + VFQPH Y+R L D+FA++ +AD +
Sbjct: 327 DISVIDDYGHHPTEIRATLAAAKQ-CGFRHIHVVFQPHRYTRTRDLMDEFASSFGDADSL 385
>gi|268610569|ref|ZP_06144296.1| UDP-N-acetylmuramate--L-alanine ligase [Ruminococcus flavefaciens
FD-1]
Length = 471
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 138/423 (32%), Positives = 215/423 (50%), Gaps = 42/423 (9%)
Query: 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQG 134
K IHF+GIGGSG+ LA++ QG+ ++GSD + ++ + + G + IG NI+G
Sbjct: 9 KKHIHFIGIGGSGMYPLAQILHGQGYYLTGSDNNETETLDAVRKMGIPVFIGQRAENIEG 68
Query: 135 NDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKS 193
D +V ++AI DN E++ AK+ GVP+ +R L +T Y N I VSG+HGK+
Sbjct: 69 AD------LIVHTAAIMADNPELIAAKASGVPVLERADLLGIVTSWYSNAICVSGTHGKT 122
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
+T SM+ +L G DL+A +G +P GS G V E+ E++ FL P ++
Sbjct: 123 STTSMITQILYTAGVDLSAYIGGKLPCI-GGSGIAGKSDILVCESCEFEDHFLKFFPDIS 181
Query: 254 VVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 313
V+ N+D +H+D F + + F +F + ++ ++ + +K
Sbjct: 182 VILNIDADHLDYFGTLENIIKSFHKF--------------NENTSKCIIINGSDENSMKS 227
Query: 314 SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQIS 373
G+ + IIT+G S D+Y E+V + Y +G L I+
Sbjct: 228 LEGITGKE------------IITFGKDSSCDYYPENVKHENGLLTTYDAMYKGEKLGTIT 275
Query: 374 LQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH 433
L + G+HNVLNSLA +A R ++ L +F G RRF+ +G G
Sbjct: 276 LHVAGIHNVLNSLAAVAAA-------RYVGAEFDAIQKGLEEFRGAKRRFEKLGFEKGIT 328
Query: 434 IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVS 493
+ DD+AHHPTE+ A L AA + N + AVFQP T+SR +L DDFA L D V++
Sbjct: 329 VVDDYAHHPTELEATLNAAMEMNFNH-VWAVFQPFTFSRTKLLLDDFARVLQIPDHAVLT 387
Query: 494 AVL 496
++
Sbjct: 388 DIM 390
>gi|410624704|ref|ZP_11335499.1| UDP-N-acetylmuramate--alanine ligase [Glaciecola pallidula DSM
14239 = ACAM 615]
gi|410155785|dbj|GAC30873.1| UDP-N-acetylmuramate--alanine ligase [Glaciecola pallidula DSM
14239 = ACAM 615]
Length = 498
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 154/466 (33%), Positives = 238/466 (51%), Gaps = 53/466 (11%)
Query: 47 MKKKNSVSVLTNCTFKRNEECIVDFKNRK-GWIHFVGIGGSGLSALAKLALKQGFEVSGS 105
M KN +S + N ++ K R+ +HF+GIGG+G+ +A++ L G++VSGS
Sbjct: 1 MSTKNKLSAYSTAEQNDNTAALMPHKMRRVQKLHFIGIGGAGMGGIAEVVLNLGYQVSGS 60
Query: 106 DLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGV 165
D+ SS L + GA++ IGHS NI+ D AV+ SSAI + N EI A +
Sbjct: 61 DMKHSSMTARLTKLGADIFIGHSTDNIKQVD------AVIVSSAINKTNPEIQIAIQQRI 114
Query: 166 PIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGS 225
PI +R LA+L IAV+G+HGK+TT S++A + D T ++G + +
Sbjct: 115 PIIRRAEMLAELMRFRYGIAVAGTHGKTTTTSLIATIFSQAKLDPTYVIGGLLNSAGTNA 174
Query: 226 IFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIR 284
G K + EADE D FL L P+++V+TN++ +H++ ++ D +K+ + FL +
Sbjct: 175 KL-GASKYLIAEADESDASFLHLQPTLSVITNIEADHLEAYQGDFSKMKNAYVEFLHNLP 233
Query: 285 VGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFND 344
G V+ GD + +L ++ G KY +TYG +D
Sbjct: 234 FYGLAVVFGDDDVVQEILPKV----GRKY---------------------LTYGQLDGSD 268
Query: 345 WYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHE 404
+ A V + S + + + + ++ L +PG+HNVLN+ A IA D+ S E
Sbjct: 269 YQAVDVVYEL-NYSHFTVKRKDKTALKVKLSLPGIHNVLNATAAIAVAT----DEGISDE 323
Query: 405 SIACLKLPLSKFMGVSRRFDLIGTI---YGCHIY-DDFAHHPTEVRAVLQAARQRFPNKA 460
I L L F G+ RRF ++G YG I DD+ HHPTEV+ + AAR +P K
Sbjct: 324 DIL---LALKNFQGIGRRFQVLGEFNQDYGSTILVDDYGHHPTEVKMTIAAARNNWPQKR 380
Query: 461 LIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAVLVFWLIIFAVS 506
++ ++QPH YSR L +DF LSE D ++ L I+A S
Sbjct: 381 VVMIYQPHRYSRTRDLYEDFVEVLSEVD-------VLLLLDIYAAS 419
>gi|383481264|ref|YP_005390179.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia rhipicephali
str. 3-7-female6-CWPP]
gi|378933603|gb|AFC72106.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia rhipicephali
str. 3-7-female6-CWPP]
Length = 485
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 142/427 (33%), Positives = 215/427 (50%), Gaps = 48/427 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG G+S +A++ G++V GSDLV + + L G + +GH+ NI
Sbjct: 16 IHFIGIGGVGMSGIAEILHNLGYKVQGSDLVENYNTKRLESYGIKIFLGHAEQNITN--- 72
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ VV SSAI N EI A +PI +R LA+L +AVSGSHGK+TT S
Sbjct: 73 ---VSYVVISSAINPKNPEIKEALERKIPIIRRADMLAELMRLKCSVAVSGSHGKTTTTS 129
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVT 256
++A + +A G T I G + + Y G N+++ EADE D F+ + ++A++T
Sbjct: 130 LVACLFEAAGLCPTVINGGIINNKSTNA--YLGSSNYLIAEADESDATFIHIPSTIAIIT 187
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY--- 313
N+D EH+D ++D + + FR F+ + G V C D + R L+D I + + Y
Sbjct: 188 NIDPEHLDYYKDFETLIGAFRSFITNLPFYGFAVCCIDHKIVRKLVDDITERKIVTYGID 247
Query: 314 ---SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
+ + N ++D+ D KI PNV G + +
Sbjct: 248 SEDAHIIAFNINTDIASSTFDVKI---------------SLPNVLGTT---------IIE 283
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+I++ PG HN+LNSLA IA + L I +K + F GV RRF +
Sbjct: 284 KITIPTPGRHNILNSLAAIAVGIEL-------DFGIKAIKNGFNNFKGVKRRFTKVAEYN 336
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQ--RFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
I DD+AHHP E++A L A+ N +IA+FQPH YSR+ L DDF ++AD
Sbjct: 337 KASIIDDYAHHPEEIKATLATAKNIANKQNGKVIAIFQPHRYSRMQYLFDDFMLCFADAD 396
Query: 489 QVVVSAV 495
+ ++ +
Sbjct: 397 ILYITDI 403
>gi|377821732|ref|YP_004978103.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia sp. YI23]
gi|357936567|gb|AET90126.1| UDP-N-acetylmuramate/alanine ligase [Burkholderia sp. YI23]
Length = 464
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 150/426 (35%), Positives = 211/426 (49%), Gaps = 49/426 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ L G+ VSGSDL + E L GA + IGH NI+G
Sbjct: 8 IHFVGIGGAGMSGIAEVLLNLGYHVSGSDLSNGAVTERLRALGARVEIGHHEQNIEG--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
NAVV S+A+ DN E+L A+ VPI R LA+L IA++G+HGK+TT S
Sbjct: 65 ---ANAVVVSTAVRPDNPEVLAARHRRVPIVPRAVMLAELMRLKQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL A G D T ++G + + G G V EADE D FL L P + V+TN
Sbjct: 122 LVASVLAAGGLDPTFVIGGRL-NSAGANARLGTGDFIVAEADESDASFLNLFPVIEVITN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D +K F F ++ G V+C D R +L + +
Sbjct: 181 IDADHMDTYGHDFARLKQAFIEFTHRLPFYGIAVLCVDDPNVREILPFVSK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
II YG + A +V G + P I L +
Sbjct: 232 ----------------PIIRYGLGAEAQVRAVNVEAR-DGRMHFTTLREDAPALDIVLNL 274
Query: 377 PGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI-----Y 430
PG HNV N+LA IA L + D A ++ L++F GV RRF G +
Sbjct: 275 PGTHNVQNALAAIAIATELEVAD--------ADIQRALAEFNGVGRRFQRYGEVSTTSDE 326
Query: 431 GCH-IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
G + + DD+ HHP E+ A + AAR FP++ L+ FQPH Y+R +DF LS D
Sbjct: 327 GAYTLIDDYGHHPVEMAATIAAARGAFPDRRLVLAFQPHRYTRTRDCFEDFVKVLSTVDA 386
Query: 490 VVVSAV 495
+V++ V
Sbjct: 387 LVLTDV 392
>gi|410465718|ref|ZP_11318933.1| UDP-N-acetylmuramate--alanine ligase [Desulfovibrio magneticus str.
Maddingley MBC34]
gi|409981234|gb|EKO37830.1| UDP-N-acetylmuramate--alanine ligase [Desulfovibrio magneticus str.
Maddingley MBC34]
Length = 469
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 143/425 (33%), Positives = 214/425 (50%), Gaps = 41/425 (9%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
+N+ IH +GIGGSG+S +A++ L G+EVSGSDL S + L GA++ IGH
Sbjct: 13 MRNKVRKIHMIGIGGSGMSGIAEVLLNLGYEVSGSDLSMSQTVRRLGSLGASIAIGHGRE 72
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N+ D VV S+A+ DN E++ A+ G+P+ R L++L IAV+G+H
Sbjct: 73 NLGDAD------VVVKSTAVTADNPEVVVARERGIPVIPRAEMLSELMRLRTGIAVAGTH 126
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S+LA + G D T I+G + + G+ G G+ + EADE DG FL LSP
Sbjct: 127 GKTTTTSLLATIFTEAGYDPTVIIGGRLNAYGAGARL-GQGEYLIAEADESDGSFLCLSP 185
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
+VVTN+D +H+D ++ A+ F FL I G V+C D +L ++ +
Sbjct: 186 VASVVTNVDADHLDHYDGIAAIDDAFVDFLNSIPFYGVNVVCLDDPGVARILPRVNR--- 242
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
I+TYGFS + + L G+ L
Sbjct: 243 ----------------------PILTYGFSDKARLRGRIIDSGAMSCFEVFL--DGKRLG 278
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
++ L PG HNVLN+L + L + +A + L+KF GV RRF+ G
Sbjct: 279 EMRLNHPGRHNVLNALGAVGVSL-------EVGIPLAPIAEALAKFGGVGRRFERKGERD 331
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
G + DD+ HHP E++A L AR +P + L+ FQPH +SR L DF AD++
Sbjct: 332 GVVVIDDYGHHPAEIKATLATARAVYPERRLVVAFQPHRFSRTKALFGDFCTCFEAADEL 391
Query: 491 VVSAV 495
+++ +
Sbjct: 392 LLTEI 396
>gi|429108885|ref|ZP_19170655.1| UDP-N-acetylmuramate--alanine ligase [Cronobacter malonaticus 507]
gi|426310042|emb|CCJ96768.1| UDP-N-acetylmuramate--alanine ligase [Cronobacter malonaticus 507]
Length = 444
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 153/470 (32%), Positives = 229/470 (48%), Gaps = 57/470 (12%)
Query: 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH 127
IV R IHFVGIGG+G+ +A++ +G+++SGSDL ++ + L GA ++ H
Sbjct: 12 IVPEMRRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNAVTQQLTALGATIYFNH 71
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
N+ D S VVASSAI DN EI+ A +P+ +R LA+L + IAV+
Sbjct: 72 RPENVL--DAS----VVVASSAISADNPEIVAAHEARIPVIRRAEMLAELMRFRHGIAVA 125
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT +M++ + G D T + G V + G + + EADE D FL
Sbjct: 126 GTHGKTTTTAMVSSIYAEAGLDPTFVNGGLV-KAAGTHARLGNSRYLIAEADESDASFLH 184
Query: 248 LSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 306
L P VA+VTN++ +H+D + D + +K F FL + G V+C D R LL ++
Sbjct: 185 LQPMVAIVTNIEADHMDTYHGDFENLKQTFINFLHNLPFYGRAVMCVDDPVIRELLPRVG 244
Query: 307 QDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERG 366
+ +I TYGFS D E+ G + L +
Sbjct: 245 R-------------------------QITTYGFSEDADVRVENYRQTGAQGH-FTLVRQD 278
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
+P ++L PG HN LN+ A ++ + E A L+ L F G RRFD +
Sbjct: 279 KPELHVTLNAPGRHNALNAAAAVSVA------TEEGIEDEAILRA-LESFQGTGRRFDFL 331
Query: 427 G-----TIYG----CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLK 477
G + G + DD+ HHPTEV A ++AAR +P K L+ +FQPH Y+R L
Sbjct: 332 GEFPLSNVNGKSGTAMLVDDYGHHPTEVDATVRAARAGWPEKNLVMIFQPHRYTRTRDLY 391
Query: 478 DDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAINSVICIVRSMLPE 527
DDFAN LS+ D ++ L ++ + A + +C +R P
Sbjct: 392 DDFANVLSQVD-------VLLMLDVYPAGEAPIPGADSRSLCPIRHRSPR 434
>gi|427390229|ref|ZP_18884635.1| UDP-N-acetylmuramate-alanine ligase [Actinobaculum massiliae
ACS-171-V-Col2]
gi|425733244|gb|EKU96050.1| UDP-N-acetylmuramate-alanine ligase [Actinobaculum massiliae
ACS-171-V-Col2]
Length = 456
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 142/398 (35%), Positives = 201/398 (50%), Gaps = 47/398 (11%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
H +GIGG+G+S +A L L +G EVSGSD S+ L AGA + IG + N+ N
Sbjct: 4 HLIGIGGAGMSVVAALLLAEGHEVSGSDAKESANTRDLERAGAKIFIGQAAGNVPAN--- 60
Query: 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASM 198
VV S+AI +N E+ A+ G I R LA + + I V+G+HGK+TT++M
Sbjct: 61 ---AIVVHSTAIRPENPELRIARERGQKILHRSQALAFAAGERDFIGVAGAHGKTTTSAM 117
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
LA L+ G D + +G V G G G+ V EADE D FL P VA+VTN+
Sbjct: 118 LAVALQEAGADPSWAIGGSVRDHGSGG-HLGAGRVLVAEADESDASFLNYHPRVALVTNV 176
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYS---- 314
+ +H+D + +A ++ F F +I GG LV+C D AR L +Q ++ G++ +
Sbjct: 177 EPDHLDHYGTREAFEAAFVEFAHRIVPGGLLVVCADDAGARRLGEQAARE-GIRVASYGR 235
Query: 315 GGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISL 374
G VS S +GH + + P V A+ SL
Sbjct: 236 GEAVSGVSQHALLRGHGNCQV-------------ELTPEVG--------------AEFSL 268
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHI 434
++PG HN LN+ T + L D Q + L F G RRF+L G G +
Sbjct: 269 RVPGAHNELNAAGAWLTGVDLGIDPAQ-------MARGLESFTGTGRRFELRGQCGGVEV 321
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSR 472
YDD+AHHPTEV A L+AAR++ + A+ +FQPH YSR
Sbjct: 322 YDDYAHHPTEVAATLRAAREK-TSGAVRVLFQPHLYSR 358
>gi|383312283|ref|YP_005365084.1| UDP-N-acetylmuramate--L-alanine ligase [Candidatus Rickettsia
amblyommii str. GAT-30V]
gi|378930943|gb|AFC69452.1| UDP-N-acetylmuramate--L-alanine ligase [Candidatus Rickettsia
amblyommii str. GAT-30V]
Length = 485
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 142/427 (33%), Positives = 215/427 (50%), Gaps = 48/427 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG G+S +A++ G++V GSDLV + + L G + +GH+ NI
Sbjct: 16 IHFIGIGGVGMSGIAEILHNLGYKVQGSDLVENYNTKRLESYGIKIFLGHAEQNITN--- 72
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ VV SSAI N EI A +PI +R LA+L +AVSGSHGK+TT S
Sbjct: 73 ---VSYVVISSAINPKNPEIKEALERKIPIIRRADMLAELMRLKCSVAVSGSHGKTTTTS 129
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVT 256
++A + +A G T I G + + Y G N+++ EADE D F+ + ++A++T
Sbjct: 130 LVACLFEAAGLCPTVINGGIINNKSTNA--YLGSSNYLIAEADESDATFIHIPSTIAIIT 187
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY--- 313
N+D EH+D ++D + + FR F+ + G V C D + R L+D I + + Y
Sbjct: 188 NIDPEHLDYYKDFETLIGAFRSFITNLPFYGFAVCCIDHKIVRKLVDDITERKIVTYGID 247
Query: 314 ---SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
+ + N ++D+ D KI PNV G + +
Sbjct: 248 SEDAHIIAFNLNTDIASSTFDVKI---------------SLPNVLGTT---------IIE 283
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+I++ PG HN+LNSLA IA + L I +K + F GV RRF +
Sbjct: 284 KITIPTPGRHNILNSLAAIAVGIEL-------DFGIKAIKNGFNNFKGVKRRFTKVAEYN 336
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQ--RFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
I DD+AHHP E++A L A+ N +IA+FQPH YSR+ L DDF ++AD
Sbjct: 337 KASIIDDYAHHPEEIKATLATAKNIANKQNGKVIAIFQPHRYSRMQYLFDDFMLCFADAD 396
Query: 489 QVVVSAV 495
+ ++ +
Sbjct: 397 ILYITDI 403
>gi|394988360|ref|ZP_10381198.1| UDP-N-acetylmuramate--L-alanine ligase [Sulfuricella denitrificans
skB26]
gi|393792818|dbj|GAB70837.1| UDP-N-acetylmuramate--L-alanine ligase [Sulfuricella denitrificans
skB26]
Length = 462
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 142/431 (32%), Positives = 218/431 (50%), Gaps = 46/431 (10%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K++ +HFVGIGG G+S +A++ + G+EVSGSDL S L GA ++ GH+ S
Sbjct: 1 MKHKVKNVHFVGIGGVGMSGIAEVLINLGYEVSGSDLGDSVATRRLKALGALVYQGHAAS 60
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N+ D VV S+A+ DN E+ A+ +P+ R LA+L IAV+G+H
Sbjct: 61 NLARAD------VVVISTAVQADNPEVAAARERNIPVVPRAMMLAELMRFKQGIAVAGTH 114
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S++A +L G D T ++G + + + G G+ V EADE D FL L P
Sbjct: 115 GKTTTTSLIASILGEAGMDPTFVIGGKL-EAAGANARLGQGEFIVAEADESDASFLYLMP 173
Query: 251 SVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
+AVVTN+D +H++ + D +K F F++++ G V+C D R ++ +I +
Sbjct: 174 VMAVVTNIDADHMETYGHDFGRLKQAFVDFIQRLPFYGMAVLCADDANVREIMPRITK-- 231
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPL 369
+ITYG + + N G D+ + G P
Sbjct: 232 -----------------------PVITYGLEEGAQVLGKDLVHN-GGRMDFKVQRAGMPD 267
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
++L +PG HNVLN+LA IA + + A + L++F GV RRF+ G +
Sbjct: 268 LAVTLNMPGQHNVLNALAAIAVAM-------EVGAPDAAIVKGLAEFSGVGRRFERYGKV 320
Query: 430 Y-----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANAL 484
+ DD+ HHP E+ A L AAR FP + L+ FQPH Y+R L +DF L
Sbjct: 321 SLPDGGSLTLIDDYGHHPVEMAATLAAARGAFPGQRLVLAFQPHRYTRTRDLFEDFVKVL 380
Query: 485 SEADQVVVSAV 495
S D ++++ +
Sbjct: 381 STVDVLLLTEI 391
>gi|444433167|ref|ZP_21228312.1| UDP-N-acetylmuramate--L-alanine ligase [Gordonia soli NBRC 108243]
gi|443886096|dbj|GAC70033.1| UDP-N-acetylmuramate--L-alanine ligase [Gordonia soli NBRC 108243]
Length = 539
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 156/465 (33%), Positives = 233/465 (50%), Gaps = 40/465 (8%)
Query: 47 MKKKNSVSVLTNCTFK-RNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGS 105
M +++ V T+ + + + D +H VGIGG+G+S LA++ L +G +VSGS
Sbjct: 1 MSDESTTHVSTDASAGVTDARPVDDLPVELQRVHMVGIGGAGMSGLARILLSRGGQVSGS 60
Query: 106 DLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVAS-SAIPQDNVEILHAKSVG 164
D S + L GA + IGH + + G P+ VV + +AIP+ N E++ A+ G
Sbjct: 61 DAKDSRGVLALRTRGAQVRIGHDPAALDLLPGG--PSVVVTTHAAIPKTNPELVAARERG 118
Query: 165 VPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDG 224
+PI R LA+L + + + V+G+HGK++T S+ L+ G D + VG + +
Sbjct: 119 IPIILRPRVLAQLMDGHRTLLVAGTHGKTSTTSLAVVALQFCGLDPSFAVGGELNES-GT 177
Query: 225 SIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIR 284
+ +G G FV EADE DG L P VAVVTN++ +H+D F A +F F +I
Sbjct: 178 NAHHGSGDIFVAEADESDGSLLEYRPDVAVVTNIEVDHLDHFGTHAAYVEVFDAFADRIV 237
Query: 285 VGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQG-HDYKIITYG-FSSF 342
GG LV+C D + A ++ D ++ GV+ +G+G H ++ +
Sbjct: 238 DGGTLVVCLDDEGAADFAGRVA-DRLIERGVGVLG------YGEGIHAARVPQAAHVARL 290
Query: 343 NDWYAESVCPNVQGGSDYILCERGRPLA------QISLQIPGVHNVLNSLAVIATVLTLI 396
+ W A V G +D + PL ++L +PG H LN+LA I +
Sbjct: 291 HGWRAS----GVGGSADVVFTA---PLTAETAERTVALTVPGRHMALNALAAIVGGVAAG 343
Query: 397 GDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQ-- 454
G + I F GV RRF+ G +YDD+AHHPTEV AVL AAR+
Sbjct: 344 GPLDEVIGGIGA-------FTGVHRRFEFRGRAADVDVYDDYAHHPTEVTAVLTAARELV 396
Query: 455 RFPNKA----LIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
P ++AVFQPH YSR +FA AL AD+VVV+ V
Sbjct: 397 TAPGAGRSGRIVAVFQPHLYSRTNDFAAEFATALDLADEVVVADV 441
>gi|453075157|ref|ZP_21977945.1| UDP-N-acetylmuramate--L-alanine ligase [Rhodococcus triatomae BKS
15-14]
gi|452763447|gb|EME21728.1| UDP-N-acetylmuramate--L-alanine ligase [Rhodococcus triatomae BKS
15-14]
Length = 504
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 152/435 (34%), Positives = 220/435 (50%), Gaps = 33/435 (7%)
Query: 62 KRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGA 121
+R + D R +H VGIGG+G+S +A++ L +G +VSGSD S + L GA
Sbjct: 7 QRPGSALPDHLQR---VHMVGIGGAGMSGIARILLARGGQVSGSDAKESRTVLSLRARGA 63
Query: 122 NLHIGHSVSNIQGNDGSRFPNAVVAS-SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEK 180
+ IGH S + G P AVV++ +AIP+DN E++ A +P+ R LA L
Sbjct: 64 QVRIGHDASALDLIPGG--PTAVVSTHAAIPKDNPELVAAAERNIPVILRPAVLASLMTG 121
Query: 181 YNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADE 240
+ + V+G+HGK++T SML L+ G D + VG + + + +G G FV EADE
Sbjct: 122 HQTLLVAGTHGKTSTTSMLVVALQHCGVDPSFAVGGELNEAGTNA-HHGSGAVFVAEADE 180
Query: 241 YDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARS 300
DG L P+V +VTN++ +H+D F +A +F F +I GG LV C D + +
Sbjct: 181 SDGSLLQYDPNVVIVTNVEADHLDFFGSTEAYVQVFDDFADRIAPGGVLVACLDDPGSAA 240
Query: 301 LLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSS-FNDWYAESVCPNVQGGSD 359
L +++ N + G G D T ++ DW A +V G +
Sbjct: 241 LAERV-----------AARNLPIRVIGYGGDEPSGTVPLAARLLDWEAR----DVGGVAR 285
Query: 360 YILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGV 419
L RP ++L +PG H LN+L + + + E I F GV
Sbjct: 286 VQLTGEDRPRV-LTLSVPGRHMALNALGALLAAREAGAEVDEIVEGIG-------GFGGV 337
Query: 420 SRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKA--LIAVFQPHTYSRLVVLK 477
RRF G G ++DD+AHHPTEVRAVL AAR+ + A ++ VFQPH YSR V
Sbjct: 338 HRRFQYTGRENGVRVFDDYAHHPTEVRAVLGAARELVRSSAGRVLVVFQPHLYSRTSVFA 397
Query: 478 DDFANALSEADQVVV 492
+F AL AD+VVV
Sbjct: 398 TEFGEALDLADEVVV 412
>gi|383483672|ref|YP_005392585.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia parkeri str.
Portsmouth]
gi|378936026|gb|AFC74526.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia parkeri str.
Portsmouth]
Length = 485
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 141/427 (33%), Positives = 213/427 (49%), Gaps = 48/427 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG G+S +A++ G++V GSDLV + + L G + +GH+ NI
Sbjct: 16 IHFIGIGGVGMSGIAEILYNLGYKVQGSDLVENYNTKRLESYGIKIFLGHAEQNITN--- 72
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ VV SSAI N EI A +PI +R LA+L +AVSGSHGK+TT S
Sbjct: 73 ---VSYVVISSAINPKNPEIKEALERKIPIIRRADMLAELMRLKCSVAVSGSHGKTTTTS 129
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVT 256
++A + +A G T I G + + Y G N+++ EADE D F+ + ++A++T
Sbjct: 130 LVACLFEAAGLCPTVINGGIINNKSTNA--YLGSSNYLIAEADESDATFIHIPSTIAIIT 187
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY--- 313
N+D EH+D + D + + FR F+ + G V C D + R L+D + + Y
Sbjct: 188 NIDPEHLDYYRDFETLIGAFRSFITNLPFYGFAVCCIDHKIVRKLVDDTTERKIVTYGID 247
Query: 314 ---SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
+ + N ++D+ D KI PNV G + +
Sbjct: 248 SEDAHIIAFNINTDIASSTFDVKI---------------SLPNVLGTT---------IIE 283
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+I++ PG HN+LNSLA IA + L I +K + F GV RRF +
Sbjct: 284 KITIPTPGRHNILNSLAAIAVGIEL-------DFGIKAIKNGFNNFKGVKRRFTKVAEYN 336
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQ--RFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
I DD+AHHP E++A L A+ N +IA+FQPH YSR+ L DDF ++AD
Sbjct: 337 NASIIDDYAHHPEEIKATLATAKNIANKQNGKVIAIFQPHRYSRMQYLFDDFMFCFADAD 396
Query: 489 QVVVSAV 495
+ ++ +
Sbjct: 397 ILYITDI 403
>gi|384192636|ref|YP_005578383.1| UDP-N-acetylmuramate--L-alanine ligase [Bifidobacterium animalis
subsp. lactis CNCM I-2494]
gi|340365373|gb|AEK30664.1| UDP-N-acetylmuramate--L-alanine ligase [Bifidobacterium animalis
subsp. lactis CNCM I-2494]
Length = 588
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 144/433 (33%), Positives = 217/433 (50%), Gaps = 38/433 (8%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G HF+GIGG+G+S LA++ +QG V GSD + E L G + N+Q
Sbjct: 101 GNTHFIGIGGAGMSVLAEMLHEQGVPVDGSDREPGAKTERLESLGIPVQFTQRAENVQDA 160
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
VV SSAI DN EI+ A + G + R LA L + + V+G+HGK+TT
Sbjct: 161 ------QVVVYSSAIKPDNPEIVAAVANGAQLVHRSDILALLMNGKHAVTVAGAHGKTTT 214
Query: 196 ASMLAYVLKAMGD----DLTAIVGAHVPQFPDGSIFYGG--GKNFVL--EADEYDGCFLG 247
+S+LA++L G D + +G + Q PDG+ GG GK VL EADE DG F
Sbjct: 215 SSLLAHILMHAGTGELADPSYAIGGSI-QGPDGTTLDGGHAGKGTVLVAEADESDGSFAK 273
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P + ++TN + +H+D + E+ + F + R +++C D A ++L +
Sbjct: 274 YHPDIEIITNAEADHLDHYHTEENYHAAFADHVTHARRA--VIMCVDDAGALAVLRSLAP 331
Query: 308 DTGLKYSGGVVSNQSSDLWG--QGHDYKIITYGFSSFNDWYAESVC--PNVQGGSDYILC 363
+ K S ++D G G + I S N V P G+D L
Sbjct: 332 EDARKVIA--YSTHTADELGDLNGATFVHIASEHESANSGTENFVIDIPAALVGADVAL- 388
Query: 364 ERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRF 423
+SL+IPG+HN N+ A I + L D ++ + F+G +RRF
Sbjct: 389 -------PVSLRIPGLHNARNATAAILAAVLLGMDAERA-------AVAAGTFLGANRRF 434
Query: 424 DLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANA 483
+ GT+ + DD+AHHPTE+ A+L+AAR+R+P+ L +FQPH +SR +FA+A
Sbjct: 435 QIRGTVSDITVVDDYAHHPTEITALLKAARRRYPDSQLHVLFQPHLFSRTQFFAQEFADA 494
Query: 484 LSEADQVVVSAVL 496
LS AD V+V+ +
Sbjct: 495 LSLADDVIVTGIF 507
>gi|365850854|ref|ZP_09391308.1| UDP-N-acetylmuramate--L-alanine ligase [Lactobacillus
parafarraginis F0439]
gi|363718103|gb|EHM01458.1| UDP-N-acetylmuramate--L-alanine ligase [Lactobacillus
parafarraginis F0439]
Length = 443
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 140/435 (32%), Positives = 218/435 (50%), Gaps = 75/435 (17%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYME-GLLEAG--------ANL 123
N + HFVGI G+G+SA+A + +G +V GSD+ ++ + GL +AG AN+
Sbjct: 2 NSETVYHFVGIKGTGMSAMALILHDRGEKVQGSDIEQYTFTQRGLEKAGIKILPFDPANI 61
Query: 124 HIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL 183
H G +V +A ++ D+ EI A+ +G+ +Y+ +L K+ +
Sbjct: 62 HEGLTV---------------IAGNSFTDDHPEIKKAREMGLTVYRYHEFLGKMIKGKTS 106
Query: 184 IAVSGSHGKSTTASMLAYVLKAMGDDLTAI---VGAHVPQFPDGSIFYGGGKNFVLEADE 240
I VSG+HGK++T +L++VL + I G VP + FV EADE
Sbjct: 107 IGVSGAHGKTSTTGLLSHVLSGIAPTDFLIGDGSGQGVPN----------ARFFVYEADE 156
Query: 241 YDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARS 300
Y FL P A++TN+D++H D ++ D V+ F+ F Q + G + GD + R
Sbjct: 157 YRRHFLATEPDYAIMTNIDFDHPDYYKSIDDVQDAFQTFANQTKKG--IFAWGDDKRLRQ 214
Query: 301 LLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDY 360
L ++ I YG +D+ A V +G S +
Sbjct: 215 LKAKVP---------------------------IYYYGLKDTDDFQAFDVKRTTKGSSFH 247
Query: 361 ILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVS 420
+ +G+ L + S+ + G HN+ NSLAVIA + D + ++ L F GV
Sbjct: 248 VKF-KGQDLGEFSVPLFGEHNIFNSLAVIAVAYSEDVD-------LDEIRKELKTFDGVK 299
Query: 421 RRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
RRF I G I DD+AHHPTE++A + AARQ +PNK + VFQPHT+SR + L DDF
Sbjct: 300 RRFSE-RKISGMTIIDDYAHHPTEIKATIDAARQEYPNKKIAVVFQPHTFSRTIALMDDF 358
Query: 481 ANALSEADQVVVSAV 495
A +L+ AD+V ++++
Sbjct: 359 AKSLNLADEVFLTSI 373
>gi|444921774|ref|ZP_21241605.1| UDP-N-acetylmuramate--L-alanine ligase [Wohlfahrtiimonas
chitiniclastica SH04]
gi|444507152|gb|ELV07333.1| UDP-N-acetylmuramate--L-alanine ligase [Wohlfahrtiimonas
chitiniclastica SH04]
Length = 471
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 141/429 (32%), Positives = 224/429 (52%), Gaps = 47/429 (10%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHF+GIGG+G+ +A++ L G+EV+GSD+ S+ +E L+ GA + IGH S++
Sbjct: 11 RINRIHFIGIGGTGMCGIAEVCLNLGYEVTGSDINLSTTVEHLIALGALVKIGHDASHVV 70
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
G + VV S+A+ DN E++ AK G+PI R L +L + IAV+G+HGK+
Sbjct: 71 GA------DVVVVSTAVHNDNPEVVAAKDFGIPIIARAQMLGELMRFHYGIAVAGTHGKT 124
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPD-GSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
TT S+LA +L+ G D T +VG + + S G G+ FV EADE D FL L P
Sbjct: 125 TTTSLLASILEEAGLDPTFVVGGRFNKSNNLSSSQLGLGEYFVAEADESDASFLYLRPMA 184
Query: 253 AVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
A+VTN+D +H+ ++ D + +K F FL + G +V+C D+ R ++ +++
Sbjct: 185 AIVTNIDKDHMSTYDGDFNTLKQTFVNFLHHLPFYGLVVMCVDNAGVREIIPALQR---- 240
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQ 371
+ITYG S D+ N S L + +++
Sbjct: 241 ---------------------PVITYGESEDADFQLLEYRSNKM--STEFLVKTPFGVSE 277
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL-----I 426
++ +PG H+ LNS+A IA + T +G S ++ L KF GV RRF +
Sbjct: 278 FTVALPGKHSALNSIAAIA-IATDLG------VSAPAIRRGLMKFKGVGRRFQFHPDVPL 330
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
T + +D+ HHPTE+++V+ A + +P K ++ FQPH YSR L D+F L
Sbjct: 331 KTGGNVSVMEDYGHHPTEIQSVMNALTEAYPKKRVVLAFQPHRYSRTEELFDEFVTVLKN 390
Query: 487 ADQVVVSAV 495
++++ +
Sbjct: 391 YPDMILTDI 399
>gi|373464492|ref|ZP_09556030.1| UDP-N-acetylmuramate--L-alanine ligase [Lactobacillus kisonensis
F0435]
gi|371762413|gb|EHO50944.1| UDP-N-acetylmuramate--L-alanine ligase [Lactobacillus kisonensis
F0435]
Length = 443
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 143/435 (32%), Positives = 215/435 (49%), Gaps = 75/435 (17%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYME-GLLEAG--------ANL 123
N HFVGI G+G+SA+A + +G V GSD+ ++ + GL +AG N+
Sbjct: 2 NSNTVYHFVGIKGTGMSAMALILHDRGEHVQGSDIEQYTFTQRGLEQAGIQILPFDEKNI 61
Query: 124 HIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL 183
H G +V +A ++ D+ EI A+ +G+ +Y+ +L K+ +
Sbjct: 62 HEGLTV---------------IAGNSFTDDHPEIKKAREMGLTVYRYHEFLGKMIQGKTS 106
Query: 184 IAVSGSHGKSTTASMLAYVLKAMGDDLTAI---VGAHVPQFPDGSIFYGGGKNFVLEADE 240
I VSG+HGK++T +LA+VL + I G VP + FV EADE
Sbjct: 107 IGVSGAHGKTSTTGLLAHVLSGIAPTDYLIGDGSGKGVPN----------ARFFVYEADE 156
Query: 241 YDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARS 300
Y FL P A++TN+D++H D +E D V+ F+ F Q + G + GD + R
Sbjct: 157 YRRHFLATKPDYAIMTNIDFDHPDYYESIDDVQDAFQTFANQTKKG--IFAWGDDKRLR- 213
Query: 301 LLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDY 360
Q+K + Y YG + +D+ A V G S +
Sbjct: 214 ---QLKASVPIYY-----------------------YGLNDTDDFQAVDVKRTTSGSSFH 247
Query: 361 ILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVS 420
+L +G+ L S+ + G HN+ NSLAVIA D + +K L F GV
Sbjct: 248 VLY-KGKDLGDFSVPLFGEHNIFNSLAVIAVAYFEEVD-------LNEIKKELMTFQGVK 299
Query: 421 RRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
RRF I G I DD+AHHPTE++A + AARQ +P+K + VFQPHT+SR + L DDF
Sbjct: 300 RRFSE-RKISGMTIIDDYAHHPTEIKATIDAARQEYPSKKIAVVFQPHTFSRTIALMDDF 358
Query: 481 ANALSEADQVVVSAV 495
A +L+ AD+V ++++
Sbjct: 359 AKSLNLADEVFLTSI 373
>gi|341583563|ref|YP_004764054.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia
heilongjiangensis 054]
gi|350273306|ref|YP_004884619.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia japonica YH]
gi|340807789|gb|AEK74377.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia
heilongjiangensis 054]
gi|348592519|dbj|BAK96480.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia japonica YH]
Length = 485
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 142/427 (33%), Positives = 214/427 (50%), Gaps = 48/427 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG G+S +A++ G++V GSDLV + + L G + +GH+ NI
Sbjct: 16 IHFIGIGGVGMSGIAEILHNLGYKVQGSDLVENYNTKRLESYGIKIFLGHAEQNITN--- 72
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ VV SSAI N EI A +PI +R LA+L +AVSGSHGK+TT S
Sbjct: 73 ---VSYVVISSAINPKNPEIKEALERKIPIIRRADMLAELMRLKCSVAVSGSHGKTTTTS 129
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVT 256
++A + +A G T I G + + Y G N+++ EADE D F+ + ++A++T
Sbjct: 130 LVACLFEAAGLCPTVINGGIINNKSTNA--YLGSSNYLIAEADESDATFIHIPSTIAIIT 187
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY--- 313
N+D EH+D + D + + FR F+ + G V C D + R L+D I + + Y
Sbjct: 188 NIDPEHLDYYRDFETLIGAFRSFINNLPFYGFAVCCIDHKIVRKLVDDITERKIVTYGID 247
Query: 314 ---SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
+ + N ++D+ D KI PNV G + +
Sbjct: 248 SEDAHIIAFNINTDIASSTFDVKI---------------SLPNVLGTT---------IIE 283
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+I++ PG HN+LNSLA IA + L I +K + F GV RRF +
Sbjct: 284 KITIPTPGRHNILNSLAAIAVGIEL-------DFGIKAIKNGFNNFKGVKRRFTKVAEYN 336
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQ--RFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
I DD+AHHP E++A L A+ N +IA+FQPH YSR+ L DDF ++AD
Sbjct: 337 KASIIDDYAHHPEEIKATLATAKNIANKQNGKVIAIFQPHRYSRMQYLFDDFMLCFADAD 396
Query: 489 QVVVSAV 495
+ ++ +
Sbjct: 397 ILYITDI 403
>gi|291533194|emb|CBL06307.1| UDP-N-acetylmuramate--L-alanine ligase [Megamonas hypermegale
ART12/1]
Length = 393
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 136/410 (33%), Positives = 217/410 (52%), Gaps = 44/410 (10%)
Query: 88 LSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVAS 147
+SA+A++ L +G+E+SGSDL S+ ++ L GA ++ GH N++G + A+V S
Sbjct: 1 MSAIAEVMLDKGYEISGSDLSESAVVKHLKAKGATIYKGHDALNVEGKE------ALVLS 54
Query: 148 SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMG 207
SAI QDN E++ AK+ G+ ++ R LA L IAV+G+HGK+TT+SM++ VL+
Sbjct: 55 SAIHQDNPELVAAKAKGLKLFHRSDILAYLLNDAKGIAVAGAHGKTTTSSMISVVLEHAK 114
Query: 208 DDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFE 267
D T ++G V + G+ G V EADE DG FL P +AV+TN++ +H+D +
Sbjct: 115 VDPTILIGGFV-DYLKGNAKLGKSDYLVAEADESDGSFLKFYPKIAVITNIEDDHMDHYG 173
Query: 268 DEDAVKSIFRRFLKQI-RVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLW 326
+ + F +F++ + + G V+C D++ R++ D++
Sbjct: 174 SMENIIKAFIQFVQNLDKETGLAVLCFDNENIRNIADKV--------------------- 212
Query: 327 GQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPLAQISLQIPGVHNVLNS 385
D K I+Y D+ A+ + + G + + + +G L ++L IPG HNVLN+
Sbjct: 213 ----DRKYISYALDHDADYMAKDI--KIDGPHTSFTVIYKGEVLGDVALNIPGKHNVLNA 266
Query: 386 LAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEV 445
LA IA SI + F G RRF I DD+AHHPTE+
Sbjct: 267 LATIAVC-------HHMGLSIEEIAEGFKVFSGTKRRFQTKFRNENVWIVDDYAHHPTEI 319
Query: 446 RAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
+ ++AA+Q P K LI FQPH YSR +L+ +F + AD +V++ +
Sbjct: 320 QTTIKAAKQTNP-KRLIVAFQPHRYSRTQLLQKEFGSCFVGADVLVLTDI 368
>gi|348030099|ref|YP_004872785.1| UDP-N-acetylmuramate--L-alanine ligase [Glaciecola nitratireducens
FR1064]
gi|347947442|gb|AEP30792.1| UDP-N-acetylmuramate--alanine ligase [Glaciecola nitratireducens
FR1064]
Length = 514
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 156/484 (32%), Positives = 248/484 (51%), Gaps = 58/484 (11%)
Query: 32 LSFKSNRTAPSILLFMKKKNSVSVLTNCTFKR-NEECIVDFKNRK-GWIHFVGIGGSGLS 89
+S ++N A ++ KK S+ + T + N ++ K R+ +HF+GIGG+G+
Sbjct: 1 MSIENNSPAGAVERPSKKAIEKSIAESTTEQSDNSVALMPHKMRRVQKLHFIGIGGAGMG 60
Query: 90 ALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSA 149
+A++ L G++VSGSD+ SS L++ GA + IGH+ N+Q D AVV SSA
Sbjct: 61 GIAEVVLNLGYQVSGSDMKHSSMTARLIKLGAEIFIGHAAENVQQAD------AVVVSSA 114
Query: 150 IPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDD 209
I + N EI A + +PI +R LA+L IAV+G+HGK+TT S++A + D
Sbjct: 115 INKSNPEIQIATELRIPIIRRAEMLAELMRFRYGIAVAGTHGKTTTTSLIATIFSQAKLD 174
Query: 210 LTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFE-D 268
T ++G + + G K + EADE D FL L P+++V+TN++ +H++ ++ D
Sbjct: 175 PTYVIGGLLNSAGTNAKL-GASKYLIAEADESDASFLHLQPTLSVITNIEADHLEAYQGD 233
Query: 269 EDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQ 328
+K+ + FL + G V+CGD + + +L ++ G KY
Sbjct: 234 FSKMKNAYVEFLHNLPFYGLAVVCGDDEVVQEILPKV----GRKY--------------- 274
Query: 329 GHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAV 388
+TYG + ND+ A V + S + + + + + L +PG+HNVLN+ A
Sbjct: 275 ------LTYGQADGNDYQAIDVKYEL-NFSHFTVKRKDKTALHVKLSLPGIHNVLNATAA 327
Query: 389 IATVLTLIGDKRQSHESI--ACLKLPLSKFMGVSRRFDLIGTI---YGCHIY-DDFAHHP 442
IA + E I A + L L F G+ RRF ++G YG I DD+ HHP
Sbjct: 328 IAVA---------TDEGISDADILLALQSFQGIGRRFQVLGQFTQDYGSTILVDDYGHHP 378
Query: 443 TEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAVLVFWLII 502
TEV + AAR + K ++ ++QPH YSR L +DF LS+ D ++ L I
Sbjct: 379 TEVAMTIAAARNNWKEKRVVMIYQPHRYSRTRDLYEDFVEVLSQVD-------VLLLLDI 431
Query: 503 FAVS 506
+A S
Sbjct: 432 YAAS 435
>gi|384189846|ref|YP_005575594.1| UDP-N-acetylmuramate--L-alanine ligase [Bifidobacterium animalis
subsp. lactis BB-12]
gi|289177338|gb|ADC84584.1| UDP-N-acetylmuramate--alanine ligase [Bifidobacterium animalis
subsp. lactis BB-12]
Length = 584
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 144/433 (33%), Positives = 217/433 (50%), Gaps = 38/433 (8%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G HF+GIGG+G+S LA++ +QG V GSD + E L G + N+Q
Sbjct: 97 GNTHFIGIGGAGMSVLAEMLHEQGVPVDGSDREPGAKTERLESLGIPVQFTQRAENVQDA 156
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
VV SSAI DN EI+ A + G + R LA L + + V+G+HGK+TT
Sbjct: 157 ------QVVVYSSAIKPDNPEIVAAVANGAQLVHRSDILALLMNGKHAVTVAGAHGKTTT 210
Query: 196 ASMLAYVLKAMGD----DLTAIVGAHVPQFPDGSIFYGG--GKNFVL--EADEYDGCFLG 247
+S+LA++L G D + +G + Q PDG+ GG GK VL EADE DG F
Sbjct: 211 SSLLAHILMHAGTGELADPSYAIGGSI-QGPDGTTLDGGHAGKGTVLVAEADESDGSFAK 269
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P + ++TN + +H+D + E+ + F + R +++C D A ++L +
Sbjct: 270 YHPDIEIITNAEADHLDHYHTEENYHAAFADHVTHARRA--VIMCVDDAGALAVLRSLAP 327
Query: 308 DTGLKYSGGVVSNQSSDLWG--QGHDYKIITYGFSSFNDWYAESVC--PNVQGGSDYILC 363
+ K S ++D G G + I S N V P G+D L
Sbjct: 328 EDARKVIA--YSTHTADELGDLNGATFVHIASEHESANSGTENFVIDIPAALVGADVAL- 384
Query: 364 ERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRF 423
+SL+IPG+HN N+ A I + L D ++ + F+G +RRF
Sbjct: 385 -------PVSLRIPGLHNARNATAAILAAVLLGMDAERA-------AVAAGTFLGANRRF 430
Query: 424 DLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANA 483
+ GT+ + DD+AHHPTE+ A+L+AAR+R+P+ L +FQPH +SR +FA+A
Sbjct: 431 QIRGTVSDITVVDDYAHHPTEITALLKAARRRYPDSQLHVLFQPHLFSRTQFFAQEFADA 490
Query: 484 LSEADQVVVSAVL 496
LS AD V+V+ +
Sbjct: 491 LSLADDVIVTGIF 503
>gi|67459429|ref|YP_247053.1| UDP-N-acetylmuramate--L-alanine ligase [Rickettsia felis URRWXCal2]
gi|75536156|sp|Q4UKN9.1|MURC_RICFE RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName:
Full=UDP-N-acetylmuramoyl-L-alanine synthetase
gi|67004962|gb|AAY61888.1| UDP-N-acetylmuramate--alanine ligase [Rickettsia felis URRWXCal2]
Length = 478
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 140/427 (32%), Positives = 216/427 (50%), Gaps = 48/427 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG G+S +A++ G++V GSDLV + + L G + +GH+ NI
Sbjct: 16 IHFIGIGGVGMSGIAEILHNLGYKVQGSDLVENYNTKRLESYGIKIFLGHAEQNITN--- 72
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ VV SSAI +N EI A +PI +R LA+L +AVSGSHGK+TT S
Sbjct: 73 ---VSYVVISSAINSNNPEIKEALERKIPIIRRAEMLAELMRLKCSVAVSGSHGKTTTTS 129
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVT 256
++A + +A G T I G + + Y G N+++ EADE D F+ + ++A++T
Sbjct: 130 LVACLFEAAGLCPTVINGGIINNKSTNA--YLGSSNYLIAEADESDATFIHIPSTIAIIT 187
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY--- 313
N+D EH+D ++D + + F+ F+ + G V C D + R L+D I + + Y
Sbjct: 188 NIDPEHLDYYKDFETLIGAFKSFITNLPFYGFAVCCIDHKIVRKLVDDITERKIVTYGID 247
Query: 314 ---SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
+ + N ++D+ D KI PNV G + +
Sbjct: 248 SEDAHIIAFNINTDIASSTFDVKI---------------SLPNVLGTT---------IIE 283
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+I++ PG HN+LNSLA IA + L I +K + F GV RRF +
Sbjct: 284 KITIPTPGRHNILNSLAAIAVGIEL-------DFGIKAIKNGFNNFKGVKRRFTKVAEYN 336
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQ--RFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
+ DD+AHHP E++A L A+ N +IA+FQPH YSR+ L DDF ++AD
Sbjct: 337 KAVVIDDYAHHPEEIKATLATAKNIADKQNGKVIAIFQPHRYSRMQHLFDDFMLCFNDAD 396
Query: 489 QVVVSAV 495
+ ++ +
Sbjct: 397 MIYITDI 403
>gi|395779665|ref|ZP_10460134.1| UDP-N-acetylmuramate-L-alanine ligase [Bartonella washoensis
085-0475]
gi|395420040|gb|EJF86325.1| UDP-N-acetylmuramate-L-alanine ligase [Bartonella washoensis
085-0475]
Length = 475
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 157/425 (36%), Positives = 228/425 (53%), Gaps = 44/425 (10%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G +HF+GIGG G+S +A++ G++V GSD V S+ +E L G N+HIGH N++
Sbjct: 8 GLLHFIGIGGIGMSGIAEVFYNLGYKVQGSDQVESANVERLRGKGINVHIGHRAENLENV 67
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
+ VV S+AI + N E + AK +PI +R LA+L IAV+G+HGK+TT
Sbjct: 68 E------VVVISTAIKETNPEYIAAKEKHLPIVRRAEMLAELMRFRRAIAVAGTHGKTTT 121
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L A G D I G + + + G G V+EADE DG FL L +AVV
Sbjct: 122 TSMVAALLDAGGFDPVVINGGIINAYGTNARM-GDGDWMVVEADESDGTFLKLPADIAVV 180
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D + AV+ FR+F++ + G V+C D +SL +I
Sbjct: 181 TNIDREHLDHYRSFGAVREAFRQFVENVPFYGFAVLCLDHPEVQSLASRI---------- 230
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS-DYILCER--GRP--LA 370
D W +ITYG + D ++ + Q D + R GR L
Sbjct: 231 -------DDRW-------VITYGANPQADVRFLNLSMDGQKMHFDVFIRSRKTGRETKLK 276
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
++ L + G HNV N+ A IA L S+E+I K L++F GV RRF G+
Sbjct: 277 KLVLPMSGQHNVSNATAAIAIAHEL----GISNETI---KKGLAEFGGVKRRFTQTGSWR 329
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
G I+DD+ HHP E++AVL AAR+ + +IA+ QPH YSRL L DDF+ ++AD V
Sbjct: 330 GVEIFDDYGHHPVEIKAVLCAARESAKGR-VIAIAQPHRYSRLYNLFDDFSACFNDADTV 388
Query: 491 VVSAV 495
+++ +
Sbjct: 389 LIAPI 393
>gi|241191221|ref|YP_002968615.1| UDP-N-acetylmuramate--L-alanine ligase [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|241196627|ref|YP_002970182.1| UDP-N-acetylmuramate--L-alanine ligase [Bifidobacterium animalis
subsp. lactis DSM 10140]
gi|384195783|ref|YP_005581528.1| UDP-N-acetylmuramate--L-alanine ligase [Bifidobacterium animalis
subsp. lactis V9]
gi|240249613|gb|ACS46553.1| UDP-N-acetylmuramate--L-alanine ligase [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|240251181|gb|ACS48120.1| UDP-N-acetylmuramate--L-alanine ligase [Bifidobacterium animalis
subsp. lactis DSM 10140]
gi|295794214|gb|ADG33749.1| UDP-N-acetylmuramate--L-alanine ligase [Bifidobacterium animalis
subsp. lactis V9]
Length = 513
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 144/433 (33%), Positives = 217/433 (50%), Gaps = 38/433 (8%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G HF+GIGG+G+S LA++ +QG V GSD + E L G + N+Q
Sbjct: 26 GNTHFIGIGGAGMSVLAEMLHEQGVPVDGSDREPGAKTERLESLGIPVQFTQRAENVQD- 84
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
VV SSAI DN EI+ A + G + R LA L + + V+G+HGK+TT
Sbjct: 85 -----AQVVVYSSAIKPDNPEIVAAVANGAQLVHRSDILALLMNGKHAVTVAGAHGKTTT 139
Query: 196 ASMLAYVLKAMGD----DLTAIVGAHVPQFPDGSIFYGG--GKNFVL--EADEYDGCFLG 247
+S+LA++L G D + +G + Q PDG+ GG GK VL EADE DG F
Sbjct: 140 SSLLAHILMHAGTGELADPSYAIGGSI-QGPDGTTLDGGHAGKGTVLVAEADESDGSFAK 198
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P + ++TN + +H+D + E+ + F + R +++C D A ++L +
Sbjct: 199 YHPDIEIITNAEADHLDHYHTEENYHAAFADHVTHARRA--VIMCVDDAGALAVLRSLAP 256
Query: 308 DTGLKYSGGVVSNQSSDLWG--QGHDYKIITYGFSSFNDWYAESVC--PNVQGGSDYILC 363
+ K S ++D G G + I S N V P G+D L
Sbjct: 257 EDARKVI--AYSTHTADELGDLNGATFVHIASEHESANSGTENFVIDIPAALVGADVALP 314
Query: 364 ERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRF 423
+SL+IPG+HN N+ A I + L D ++ + F+G +RRF
Sbjct: 315 --------VSLRIPGLHNARNATAAILAAVLLGMDAERA-------AVAAGTFLGANRRF 359
Query: 424 DLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANA 483
+ GT+ + DD+AHHPTE+ A+L+AAR+R+P+ L +FQPH +SR +FA+A
Sbjct: 360 QIRGTVSDITVVDDYAHHPTEITALLKAARRRYPDSQLHVLFQPHLFSRTQFFAQEFADA 419
Query: 484 LSEADQVVVSAVL 496
LS AD V+V+ +
Sbjct: 420 LSLADDVIVTGIF 432
>gi|219683260|ref|YP_002469643.1| UDP-N-acetylmuramate--L-alanine ligase [Bifidobacterium animalis
subsp. lactis AD011]
gi|219620910|gb|ACL29067.1| UDP-N-acetylmuramate--alanine ligase [Bifidobacterium animalis
subsp. lactis AD011]
Length = 525
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 144/433 (33%), Positives = 217/433 (50%), Gaps = 38/433 (8%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G HF+GIGG+G+S LA++ +QG V GSD + E L G + N+Q
Sbjct: 38 GNTHFIGIGGAGMSVLAEMLHEQGVPVDGSDREPGAKTERLESLGIPVQFTQRAENVQD- 96
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
VV SSAI DN EI+ A + G + R LA L + + V+G+HGK+TT
Sbjct: 97 -----AQVVVYSSAIKPDNPEIVAAVANGAQLVHRSDILALLMNGKHAVTVAGAHGKTTT 151
Query: 196 ASMLAYVLKAMGD----DLTAIVGAHVPQFPDGSIFYGG--GKNFVL--EADEYDGCFLG 247
+S+LA++L G D + +G + Q PDG+ GG GK VL EADE DG F
Sbjct: 152 SSLLAHILMHAGTGELADPSYAIGGSI-QGPDGTTLDGGHAGKGTVLVAEADESDGSFAK 210
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P + ++TN + +H+D + E+ + F + R +++C D A ++L +
Sbjct: 211 YHPDIEIITNAEADHLDHYHTEENYHAAFADHVTHARRA--VIMCVDDAGALAVLRSLAP 268
Query: 308 DTGLKYSGGVVSNQSSDLWG--QGHDYKIITYGFSSFNDWYAESVC--PNVQGGSDYILC 363
+ K S ++D G G + I S N V P G+D L
Sbjct: 269 EDARKVI--AYSTHTADELGDLNGATFVHIASEHESANSGTENFVIDIPAALVGADVALP 326
Query: 364 ERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRF 423
+SL+IPG+HN N+ A I + L D ++ + F+G +RRF
Sbjct: 327 --------VSLRIPGLHNARNATAAILAAVLLGMDAERA-------AVAAGTFLGANRRF 371
Query: 424 DLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANA 483
+ GT+ + DD+AHHPTE+ A+L+AAR+R+P+ L +FQPH +SR +FA+A
Sbjct: 372 QIRGTVSDITVVDDYAHHPTEITALLKAARRRYPDSQLHVLFQPHLFSRTQFFAQEFADA 431
Query: 484 LSEADQVVVSAVL 496
LS AD V+V+ +
Sbjct: 432 LSLADDVIVTGIF 444
>gi|254419677|ref|ZP_05033401.1| UDP-N-acetylmuramate--alanine ligase [Brevundimonas sp. BAL3]
gi|196185854|gb|EDX80830.1| UDP-N-acetylmuramate--alanine ligase [Brevundimonas sp. BAL3]
Length = 470
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 151/422 (35%), Positives = 223/422 (52%), Gaps = 40/422 (9%)
Query: 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGN 135
G +HFVG+GG G+S +A++ LK G+ V GSD S+ E L + GA + IGH +++
Sbjct: 13 GPVHFVGVGGIGMSGIAEIMLKIGYSVQGSDAKASANTERLEKLGARIFIGHDAAHV--- 69
Query: 136 DGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTT 195
S +AVV S+A+ DN E+ A+ +P+ +R LA+L IAV G+HGK+TT
Sbjct: 70 --SEGVSAVVYSTAVKADNPEMKAARERRIPLVRRAEMLAELMRLQFSIAVGGTHGKTTT 127
Query: 196 ASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVV 255
SM+A +L A G D T + G + + + G G V+EADE DG FL L +VA+V
Sbjct: 128 TSMVAALLDAAGLDPTVVNGGIINAYGTNAKV-GDGDWIVVEADESDGSFLRLKSTVAIV 186
Query: 256 TNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSG 315
TN+D EH+D + D DAV+ F F++ I G +C D + L+ I
Sbjct: 187 TNIDPEHLDHYGDFDAVRKAFVDFVENIPFYGFAAVCLDHPEVQKLVASID--------- 237
Query: 316 GVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQ 375
+ +++TYG + A++ G ++ + G +L
Sbjct: 238 ---------------NRRLVTYGINPQAMVRADNCQMGPDGARFDVVIQNGETYRIENLH 282
Query: 376 IP--GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH 433
+P G HNV N+LA IA R+ S ++ L+ F GV RRF G + G
Sbjct: 283 LPMAGWHNVSNALAAIAVA-------RELDVSDEAIREGLAGFGGVKRRFTTTGVVNGVR 335
Query: 434 IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVS 493
I DD+ HHP E+ AVL+AARQ + +IAV QPH Y+RL L ++F+ A S+AD V+V+
Sbjct: 336 IVDDYGHHPVEIVAVLKAARQVTEGR-VIAVVQPHRYTRLRDLMNEFSTAFSDADSVIVA 394
Query: 494 AV 495
V
Sbjct: 395 DV 396
>gi|239947811|ref|ZP_04699564.1| UDP-N-acetylmuramate--alanine ligase [Rickettsia endosymbiont of
Ixodes scapularis]
gi|239922087|gb|EER22111.1| UDP-N-acetylmuramate--alanine ligase [Rickettsia endosymbiont of
Ixodes scapularis]
Length = 479
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 141/427 (33%), Positives = 215/427 (50%), Gaps = 48/427 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG G+S +A++ G++V GSDLV + + L G + +GH+ NI
Sbjct: 16 IHFIGIGGVGMSGIAEILHNLGYKVQGSDLVENYNTKRLESYGIKIFLGHAEQNITN--- 72
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ +V SSAI +N EI A +PI +R LA+L +AVSGSHGK+TT S
Sbjct: 73 ---VSYIVISSAINPNNPEIKEALERKIPIIRRAEMLAELMRLKCSVAVSGSHGKTTTTS 129
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVL-EADEYDGCFLGLSPSVAVVT 256
++A + +A G T I G + + Y G N+++ EADE D F+ + ++A++T
Sbjct: 130 LVACLFEAAGLCPTVINGGIINNKSTNA--YLGSSNYLIAEADESDATFIHIPSTIAIIT 187
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY--- 313
N+D EH+D ++D + + FR F+ + G V C D + R L+D I + + Y
Sbjct: 188 NIDPEHLDYYKDFETLIGAFRSFITNLPFYGFAVCCIDHKIVRKLVDDITERKIVTYGID 247
Query: 314 ---SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
+ + N ++D+ D KI PNV G + +
Sbjct: 248 SEDAHIIAFNINTDIASSTFDVKI---------------SLPNVLGAT---------IIE 283
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+I++ PG HN+LNSLA IA + L I +K + F GV RRF +
Sbjct: 284 KITIPTPGRHNILNSLAAIAVGIEL-------DFGIKAIKNGFNNFKGVKRRFTKVAEYN 336
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQ--RFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
I DD+AHHP E++A L A+ N +IA+FQPH YSR+ L DDF +AD
Sbjct: 337 KASIIDDYAHHPEEIKATLATAKNIANKQNGKVIAIFQPHRYSRMQHLFDDFMLCFVDAD 396
Query: 489 QVVVSAV 495
+ ++ +
Sbjct: 397 ILYITDI 403
>gi|413958941|ref|ZP_11398180.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia sp. SJ98]
gi|413941521|gb|EKS73481.1| UDP-N-acetylmuramate--L-alanine ligase [Burkholderia sp. SJ98]
Length = 464
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 149/426 (34%), Positives = 208/426 (48%), Gaps = 49/426 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG+G+S +A++ L G+ VSGSDL + E L GA + IGH NI+G
Sbjct: 8 IHFVGIGGAGMSGIAEVLLNLGYHVSGSDLSNGAVTERLRALGARVEIGHHEQNIEG--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
NAVV S+A+ DN E+L A+ VPI R LA+L IA++G+HGK+TT S
Sbjct: 65 ---ANAVVVSTAVRPDNPEVLAARHRRVPIVPRAVMLAELMRLKQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL A G D T ++G + + G G V EADE D FL L P + V+TN
Sbjct: 122 LVASVLAAGGLDPTFVIGGRL-NSAGANARLGTGDFIVAEADESDASFLNLFPVIEVITN 180
Query: 258 LDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+D + D +K F F ++ G V+C D R +L + +
Sbjct: 181 IDADHMDTYGHDFARLKQAFIEFTHRLPFYGIAVLCVDDPNVREILPFVSK--------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
II YG + A +V G + P I L +
Sbjct: 232 ----------------PIIRYGLGAEAQVRAVNVEAR-DGRMHFTTLREDAPSLDIVLNL 274
Query: 377 PGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH-- 433
PG HNV N+LA IA L + D A ++ L++F GV RRF G +
Sbjct: 275 PGTHNVQNALAAIAIATELEVAD--------ADIQRALAEFNGVGRRFQSYGEVSAASGE 326
Query: 434 ----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
+ DD+ HHP E+ A + AAR FP + L+ FQPH Y+R +DF LS D
Sbjct: 327 GAYTLIDDYGHHPVEMAATIAAARGAFPGRRLVLAFQPHRYTRTRDCFEDFVKVLSTVDA 386
Query: 490 VVVSAV 495
+V++ V
Sbjct: 387 LVLTDV 392
>gi|170076738|ref|YP_001733376.1| UDP-N-acetylmuramate--L-alanine ligase [Synechococcus sp. PCC 7002]
gi|169884407|gb|ACA98120.1| UDP-N-acetylmuramate--alanine ligase [Synechococcus sp. PCC 7002]
Length = 488
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 143/426 (33%), Positives = 209/426 (49%), Gaps = 48/426 (11%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
HF+GIGG G+SALA + ++ VSGSD S E L GA++ N+Q G
Sbjct: 12 HFIGIGGIGMSALAYVLAQKKLPVSGSDQRTSHITERLAAVGAHIFSQQVKENLQAFGGE 71
Query: 139 R--------FPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
P V+ S+AI Q+N E A+S+G I+ R L+ L +Y+ +AV G+H
Sbjct: 72 SDAIEQHNGLPQ-VICSTAIGQENPEFQAAQSLGCHIFHRSDVLSALVAEYDSVAVGGTH 130
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT+S++ Y+ G D T IVG V + DG+ G G V EADE DG + L P
Sbjct: 131 GKTTTSSLIGYIFLVAGVDPTIIVGGEVDAW-DGNARLGQGNYLVAEADESDGTLVKLRP 189
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
+ VVTN++ +H D ++ D V IF+ F +Q L+ C D C + G
Sbjct: 190 QLGVVTNIELDHPDHYQSLDQVVEIFQTFAQQCD---RLIACVD--CPTIATGVVPYQVG 244
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
G+ + + +D W I YG +S + + ERG L
Sbjct: 245 Y----GLQNLEQADYWATD-----IHYGATS----------------TQATIWERGDRLG 279
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
+I+L + G HN+ N+L IA R + L+ F G RRF++ G
Sbjct: 280 EINLALLGAHNLSNALGAIAAA-------RCCGVPFEPIAEALASFQGAKRRFEIRGQYQ 332
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRF-PNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
G + DD+AHHP+E+ LQAAR R + ++A+FQPH YSR D+FA A AD
Sbjct: 333 GITLIDDYAHHPSEIEVTLQAARLRAGQGRRVVAIFQPHRYSRTQAFFDEFAKAFKNADV 392
Query: 490 VVVSAV 495
+++ +
Sbjct: 393 TIITDI 398
>gi|296125459|ref|YP_003632711.1| UDP-N-acetylmuramate--L-alanine ligase [Brachyspira murdochii DSM
12563]
gi|296017275|gb|ADG70512.1| UDP-N-acetylmuramate/alanine ligase [Brachyspira murdochii DSM
12563]
Length = 462
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 141/429 (32%), Positives = 223/429 (51%), Gaps = 44/429 (10%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
F RK IHF+GIGG G+SA+A + GF ++GSDL ++ E L ++G ++ GH S
Sbjct: 2 FTKRKEKIHFIGIGGIGMSAIASVLNAIGFTITGSDLAKTAKTESLEKSGIKVYYGHHAS 61
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
NI+ + AVV SSAI N EI+ AK+ + + R LA+L IA+SGSH
Sbjct: 62 NIEDD-----ITAVVTSSAISPANEEIVAAKAKKITVISRGEMLAELMRLRYGIAISGSH 116
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNF-VLEADEYDGCFLGLS 249
GK+TT S+++ ++ G + I+G + ++ + V EADE DG FL LS
Sbjct: 117 GKTTTTSLISQIMMHAGLNPVCIIGGNHFNLKSNAVCNDLSSEYMVCEADESDGSFLRLS 176
Query: 250 PSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
P + VVTN+D +H+D + + +A++ F F+ ++ G +C ++ R L
Sbjct: 177 PVINVVTNIDNDHLDYYGNVEALRVAFLEFINKVPFYGCSFLCFENDVVRDL-------- 228
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP- 368
+ + K +YGF D++ + V+ Y + +
Sbjct: 229 -----------------SKSANKKYYSYGFDKSYDFHVDKDSIRVEAPITYFIAYHNKEC 271
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
L + S+ + G HN+LNSLA I L D + +K L F GV RR +
Sbjct: 272 LGEFSVPLIGEHNILNSLASIGVAYHLGID-------VPNIKEGLKTFEGVGRRLN---K 321
Query: 429 IYGCHI--YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
+Y I +DD+AHHPTE++A L + R + ++ +IAVFQPH YSR +L +DF A ++
Sbjct: 322 LYDKEITLFDDYAHHPTEIKATLSSVRNAYKSRRIIAVFQPHRYSRTELLLNDFEYAFND 381
Query: 487 ADQVVVSAV 495
AD+V+++ +
Sbjct: 382 ADEVIITDI 390
>gi|440509724|ref|YP_007347160.1| UDP-N-acetylmuramate--L-alanine ligase [Candidatus Blochmannia
chromaiodes str. 640]
gi|440453937|gb|AGC03429.1| UDP-N-acetylmuramate--L-alanine ligase [Candidatus Blochmannia
chromaiodes str. 640]
Length = 480
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 148/439 (33%), Positives = 222/439 (50%), Gaps = 54/439 (12%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+ NR IHFVGIGG+G+ +A++ +G+ ++GSD+V+SS L E G + IGH
Sbjct: 13 IPMMNRIRKIHFVGIGGTGMCGIAEILAHEGYCITGSDIVYSSKTRHLFELGVKIFIGHK 72
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSG 188
SNI N +V SSAI +N EIL AK +P+ KR L++L + IA+SG
Sbjct: 73 YSNINN------ANVIVVSSAIHPNNPEILAAKQARIPVIKRAEMLSELMRFRHGIAISG 126
Query: 189 SHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDG-SIFYGGGKNFVLEADEYDGCFLG 247
+HGK+TT +M+A + A G D T I G V +G G + ++EADE D FL
Sbjct: 127 THGKTTTTTMIANIYTAAGLDPTFINGGIVKS--EGVHARLGYSRYLIVEADESDNSFLH 184
Query: 248 LSPSVAVVTNLDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 306
L P V V+TN+D +H+ ++ + +K F FL + G+ ++C D +L +IK
Sbjct: 185 LHPMVEVITNIDTDHIHEYQGNFEYLKKAFIDFLHNLPFYGYAIVCIDDPVICEILPKIK 244
Query: 307 QDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERG 366
+ KIITYGF+ + + + +++ S + +
Sbjct: 245 R-------------------------KIITYGFNKNANLHIFNYHQHIE-KSSFTVSRLN 278
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
+ Q++L PG HN LN+ A IA I DK LK L F G RRF+
Sbjct: 279 QTKLQVTLNAPGCHNALNATAAIAVATEEGISDK-------IILKTMLD-FQGTHRRFEN 330
Query: 426 IG-----TIYG----CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVL 476
+G I G + DD+ HHP E++A + R +P++ LI VFQPH Y+R+ L
Sbjct: 331 LGYYSLNKINGQTGEILLIDDYGHHPAELQATIVTIRTGWPDRRLIMVFQPHRYTRIKEL 390
Query: 477 KDDFANALSEADQVVVSAV 495
DF + LS D +++ V
Sbjct: 391 YYDFIDVLSNVDILLILHV 409
>gi|302344213|ref|YP_003808742.1| UDP-N-acetylmuramate--L-alanine ligase [Desulfarculus baarsii DSM
2075]
gi|301640826|gb|ADK86148.1| UDP-N-acetylmuramate/alanine ligase [Desulfarculus baarsii DSM
2075]
Length = 458
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 152/427 (35%), Positives = 229/427 (53%), Gaps = 53/427 (12%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
NR IHFVGIGG G+S +A++ + G VSGSDL S+ E L GA +H+GH +
Sbjct: 3 NRPQNIHFVGIGGIGMSGIAEVLINLGQRVSGSDLRQSAITERLRGLGARVHLGHHPEQV 62
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
+G + VV SSA+ +DN E+ A + +P+ R LA+L +AV+G+HGK
Sbjct: 63 RGA------DVVVVSSAVDKDNPEVAAAIELQIPVIPRAEMLAELMRLKYGVAVAGAHGK 116
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+T S++A +L A G D T +VG + ++ G G+ V EADE DG F LSP V
Sbjct: 117 TTCTSLVATLLAAGGLDPTVVVGGKLGALGTNAVL-GRGEFLVAEADESDGSFNRLSPVV 175
Query: 253 AVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
VVTN+D EH+D + + A+ F F+ ++ G +IC D +L+ ++++
Sbjct: 176 VVVTNIDREHMDHYGSDQALDEAFVEFMNKVPFYGAAIICLDDPRVAALIPRVRK----- 230
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPLAQ 371
++ITYG S D+ A V + QG + + L +G+ L +
Sbjct: 231 --------------------RVITYGQSGQADFEAREV--SHQGMRTSFSLFAQGQNLGR 268
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSK-----FMGVSRRFDLI 426
+ + +PG HNVLN+LA +A L + +P++ F GV RR +
Sbjct: 269 VQVPLPGRHNVLNTLAALAVAKEL------------GVAMPVAMSACAGFGGVGRRMEQK 316
Query: 427 G-TIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
G + G + DD+AHHPTE+RA LQAAR +P+K L+ FQPH YSR L ++FA A
Sbjct: 317 GQSAAGALVVDDYAHHPTEIRATLQAARDCWPDKRLVVCFQPHRYSRTRDLFEEFATAFY 376
Query: 486 EADQVVV 492
AD++++
Sbjct: 377 VADELLL 383
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.137 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,353,986,196
Number of Sequences: 23463169
Number of extensions: 351818122
Number of successful extensions: 940334
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5303
Number of HSP's successfully gapped in prelim test: 2929
Number of HSP's that attempted gapping in prelim test: 906919
Number of HSP's gapped (non-prelim): 12675
length of query: 538
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 390
effective length of database: 8,886,646,355
effective search space: 3465792078450
effective search space used: 3465792078450
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)