BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009293
(538 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2JD48|MURC_FRASC UDP-N-acetylmuramate--L-alanine ligase OS=Frankia sp. (strain CcI3)
GN=murC PE=3 SV=1
Length = 502
Score = 271 bits (692), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 176/439 (40%), Positives = 246/439 (56%), Gaps = 41/439 (9%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
R +HF+GIGGSGLS LA++ L G VSGSD S + L G + IG +
Sbjct: 4 QRTQHVHFLGIGGSGLSPLAQIHLAGGGTVSGSDSEDSPRVATLRARGVPIRIGATPGPA 63
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
+ VVASSA+P D+ EI+ A+++G+P+ +R WL +LT Y L+AV+GSHGK
Sbjct: 64 AFAAELAGADVVVASSALPDDHPEIVAARALGLPVRRRSEWLPELTAGYRLVAVAGSHGK 123
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
STT++ML VL+A G D TA++GA V Q G+ G G FVLE+DEY G F GL PS+
Sbjct: 124 STTSAMLTLVLRAAGLDPTAVIGAEVSQL-GGNALAGSGDVFVLESDEYGGAFAGLDPSI 182
Query: 253 AVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
AV+TN++WEH D+F DE +V++ F F +++R GG LV+CGD ++L ++ G +
Sbjct: 183 AVITNVEWEHPDVFPDEASVRTAFAAFARRVRPGGRLVVCGDHPGVVAVLTEL----GRQ 238
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDY---ILCERGRPL 369
G V+ +D +I YGF + W A V G D + G+ +
Sbjct: 239 RPGNDVAV---------NDVAVIDYGFGAERHWRAVDVV--TTAGDDMTRATVLRAGQEI 287
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
++L +PG H+VLN+LAV+AT L + A L+ F G +RRF+ +G
Sbjct: 288 GALTLTVPGRHSVLNALAVLATATEL-------GVAPAQTLTTLTTFTGAARRFEFVGFW 340
Query: 430 YG---------------CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLV 474
G + DD+AHHPTEVR L AAR R + + V QPHT+SR
Sbjct: 341 NGPADSTGVGPAGGPGSLEVIDDYAHHPTEVRLTLAAARSRARGRQIWTVLQPHTFSRFA 400
Query: 475 VLKDDFANALSEADQVVVS 493
L DDFA A S+AD+V V+
Sbjct: 401 ALLDDFAAAFSDADRVYVT 419
>sp|A6TJM2|MURC_ALKMQ UDP-N-acetylmuramate--L-alanine ligase OS=Alkaliphilus
metalliredigens (strain QYMF) GN=murC PE=3 SV=1
Length = 460
Score = 259 bits (661), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 147/419 (35%), Positives = 236/419 (56%), Gaps = 41/419 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH +GIGG +SA+A++ L+ G+ +SGSD+ S+ L + GA + IGH+ NIQ
Sbjct: 14 IHLIGIGGISMSAIAEILLENGYHISGSDMKESNLTHKLRDHGAEIFIGHASENIQN--- 70
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYN-LIAVSGSHGKSTTA 196
P+ VV ++A+ DN E + A+ +G+P+ R L ++ +KY IAV+GSHGK+TT
Sbjct: 71 ---PDLVVYTAAVKADNPERIRAEELGIPLADRAEMLGQIMKKYEKAIAVAGSHGKTTTT 127
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
S+++ +++ D T +VG + + G+I G ++F+ EA EY FL P + ++
Sbjct: 128 SLISLLMEYSNLDPTILVGGELDEI-GGNIKIGQSQHFITEACEYVESFLKFYPFIGIIL 186
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N+D +H+D F+D + +KS F++F ++I G L+ D R +
Sbjct: 187 NIDEDHLDYFKDIEHIKSAFKKFAQRIPKEGFLIASYDDAHVREI--------------- 231
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
S DL D +ITYG + + + A ++ + +G + + G+ + SL I
Sbjct: 232 -----SRDL-----DCHVITYGIKTKSQFMAHNIEFSFEGLPSFDVSFEGKTIGSFSLNI 281
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG+HNV NSLA IAT L D + +++F G+ RRFDL+G + G + D
Sbjct: 282 PGLHNVYNSLAAIATTYVLGVDP-------VAISKHITRFKGIHRRFDLLGEVKGAKVID 334
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHP E+RA L+AA+ ++P+K + VFQPHTYSR L DFA + AD V+++ +
Sbjct: 335 DYAHHPVEIRATLEAAK-KYPHKKIWCVFQPHTYSRTQALLKDFAKSFYLADHVIITDI 392
>sp|Q8R749|MURC_THETN UDP-N-acetylmuramate--L-alanine ligase OS=Thermoanaerobacter
tengcongensis (strain DSM 15242 / JCM 11007 / NBRC
100824 / MB4) GN=murC PE=3 SV=1
Length = 460
Score = 256 bits (654), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 145/419 (34%), Positives = 229/419 (54%), Gaps = 41/419 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GIGG +S LA + L++G ++GSD+ S +E L + GA ++I H ++ G D
Sbjct: 11 IHFIGIGGISMSGLAHILLEEGHTITGSDIKNSHLIERLEKEGAKINIPHMAESVIGAD- 69
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHGKSTTA 196
VV ++AI DNVE AK +G+PI R L + +KY +AV+GSHGK+TT
Sbjct: 70 -----LVVYTAAIHDDNVEYQKAKELGIPIIDRATLLGLIMKKYKFGVAVAGSHGKTTTT 124
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
S+++ +L G D T +VG + G++ G + FV EA EY FL P +AV+
Sbjct: 125 SLISVILDRAGYDPTVLVGGEIDAIG-GNVRVGKSEYFVTEACEYTDSFLKFYPYIAVIL 183
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N+D +H+D F++ D +K FR+F + G +V C D ++
Sbjct: 184 NVDSDHLDYFKNIDNIKQSFRQFASLVPSDGFVVACKDDANTMHVI-------------- 229
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+G + I+TYG + +DW A+ + + +G + + + RG+ + L I
Sbjct: 230 -----------KGLEKNIVTYGINEKSDWQAKDITYDEKGCASFNVYYRGKFIGHFKLSI 278
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG HN+ N+LA +A L D ++ E I +F G RRF++ G + G + D
Sbjct: 279 PGKHNIYNALASLAVTYLLGVDTEKAKEYI-------KEFKGTHRRFEVKGVVEGVTVVD 331
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+AHHP E+ A L+AA+ +P+K +IA+FQPHTYSR L DFA + AD+++++ +
Sbjct: 332 DYAHHPAEIHATLEAAKN-YPHKRIIAIFQPHTYSRTKALLSDFAESFDAADKIIITDI 389
>sp|A9FI59|MURC_SORC5 UDP-N-acetylmuramate--L-alanine ligase OS=Sorangium cellulosum
(strain So ce56) GN=murC PE=3 SV=1
Length = 469
Score = 255 bits (652), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 155/428 (36%), Positives = 232/428 (54%), Gaps = 44/428 (10%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
F+ R +HFVGIGG G+S LA++ FEVSGSDL SS L G + IGH
Sbjct: 2 FRGRVRHVHFVGIGGVGMSGLAEILRSLEFEVSGSDLKESSTTRRLTSLGVRIDIGHRAE 61
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N++G D VV SSAI +N E+ A+++G P+ R LA+L +A++GSH
Sbjct: 62 NVRGVD------VVVYSSAIRPENPELTEARALGTPVIGRAEMLAELMRVKYGVAIAGSH 115
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S++A VL+A G D T +VG + + G G V EADE DG FL L+P
Sbjct: 116 GKTTTTSLVATVLRAAGLDPTVVVGGKMAALGTNARL-GAGDLLVAEADESDGSFLRLTP 174
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
++AVVTN+D EH+D + + +K F F ++ G V+C D + LL +I +
Sbjct: 175 TIAVVTNIDPEHLDHYGTHERIKDAFVEFAARVPFYGLAVLCLDHPHVQDLLPRIPR--- 231
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPL 369
+ +TYG S +D+ A + +G + + RG PL
Sbjct: 232 ----------------------RHVTYGVSPQSDYSARGI--QFRGLETSFNAYRRGEPL 267
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
++++PG HNVLN LA IA + D+ + + K L+ F GV+RRF ++G+I
Sbjct: 268 GGFTVKMPGAHNVLNCLATIA-----VADELEV--PLDVTKQALATFGGVARRFTVVGSI 320
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFP--NKALIAVFQPHTYSRLVVLKDDFANALSEA 487
G + DD+ HHP E+RA + AAR+ FP + ++ FQPH ++R L D+F A ++A
Sbjct: 321 GGVTMIDDYGHHPAEIRATIDAARRAFPGEDHRVVVAFQPHRHTRTRDLFDEFTRAFNQA 380
Query: 488 DQVVVSAV 495
D ++V+ +
Sbjct: 381 DVLLVTDI 388
>sp|B9MND8|MURC_CALBD UDP-N-acetylmuramate--L-alanine ligase OS=Caldicellulosiruptor
bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320)
GN=murC PE=3 SV=1
Length = 455
Score = 253 bits (647), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 152/417 (36%), Positives = 241/417 (57%), Gaps = 41/417 (9%)
Query: 80 FVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSR 139
F+GIGG +SA+A + QGF V GSD+ S+ + L E G N++IGH S+I G++
Sbjct: 6 FIGIGGISMSAIALILKNQGFWVEGSDMQESATTKMLRENGINVYIGHDESHIHGDE--- 62
Query: 140 FPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKSTTASM 198
V+ ++AI +DN E+L AK + + IY+R +L L + + N+I +SG+HGK+TT SM
Sbjct: 63 ---TVIYTAAISKDNPELLAAKRMNLKIYERAEFLGLLMKDFKNVITISGTHGKTTTTSM 119
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
+ Y+LK + T +VGA V Q G+ G + V+EA EY FL +P++ V+ N+
Sbjct: 120 IGYILKKANYNPTVLVGAFVKQLG-GNFVIGSKEYLVVEACEYVDSFLKFNPTIGVILNI 178
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVV 318
D +H+D F+D D++K+ F++F ++I G LV+ D + + +++Q+ +
Sbjct: 179 DNDHLDYFKDIDSIKNSFKKFAQKIPTSGFLVVNYDDKNVKDIINQLNTQIIC-----IS 233
Query: 319 SNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPG 378
+ + +D++ S +D Y E +V+ +D I LA I L IPG
Sbjct: 234 TKEKTDIFADN----------ISCSDGYYEF---DVKNNNDEI-------LAHIKLNIPG 273
Query: 379 VHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDF 438
HNV N+LA A L ESI ++ LS+F G SRR + +G G ++YDD+
Sbjct: 274 FHNVYNALAAFAVASKL------GVESIT-IEQALSEFRGASRRLEKVGEFNGIYLYDDY 326
Query: 439 AHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
AHHPTE++A L A ++ ++A+FQPHT+SRL L ++FA +L AD+V+V+ V
Sbjct: 327 AHHPTEIKATL-ATLKKISEGKVLAIFQPHTFSRLKTLLNEFAESLQLADKVIVTDV 382
>sp|Q97E89|MURC_CLOAB UDP-N-acetylmuramate--L-alanine ligase OS=Clostridium
acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 /
LMG 5710 / VKM B-1787) GN=murC PE=3 SV=1
Length = 458
Score = 248 bits (633), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 151/430 (35%), Positives = 244/430 (56%), Gaps = 47/430 (10%)
Query: 70 DFKNR-KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
D KN IHF+GIGG +S LA++ L++GF+VSGSD+ S ++ L E GA +++GH+
Sbjct: 4 DLKNDISKKIHFIGIGGVSMSGLAEILLERGFKVSGSDMNGSPMIDKLKEHGAEIYLGHN 63
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAV 186
NI D VV ++AIP+DN E+++A+ + + R +L L + KYN IA+
Sbjct: 64 EKNINNVD------IVVYTAAIPEDNPELIYARKNNISLMTRAEFLGSLMKGHKYN-IAI 116
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
SG+HGK+TT SM++++ D T +VG ++ +G++ G F+ EA EY FL
Sbjct: 117 SGTHGKTTTTSMVSHIALTEDVDPTILVGGNL-DIINGNVLAGKSDYFITEACEYKASFL 175
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVI-CGDSQCARSLLDQI 305
P + V+ N+D +H+D +++ D +++ F +F+ I G+L+ D + AR
Sbjct: 176 EFYPYIGVILNIDADHLDYYKNIDDIENTFAKFVNLIPKEGYLIANADDKRVAR------ 229
Query: 306 KQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER 365
V SN + + ++++G + D A+++ N G S + + +
Sbjct: 230 -----------VASNATCN---------VVSFGIDN-GDIRAKNISFNESGFSSFDVYKS 268
Query: 366 GRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDL 425
L I L +PG HN+LN+L+ IA+ LTL + SH+SI L F G RRF++
Sbjct: 269 SELLFNIELNVPGKHNILNALSAIASALTL----KISHKSIID---GLKSFKGTHRRFEI 321
Query: 426 IGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALS 485
G G + DD+AHHPTE++A L AA+ +P+ + VFQPHTYSR + L DDF+N+ S
Sbjct: 322 KGVKNGITVIDDYAHHPTEIKATLDAAKN-YPHNKIYCVFQPHTYSRTLSLFDDFSNSFS 380
Query: 486 EADQVVVSAV 495
D++V++ +
Sbjct: 381 GVDELVLADI 390
>sp|A4J2B2|MURC_DESRM UDP-N-acetylmuramate--L-alanine ligase OS=Desulfotomaculum reducens
(strain MI-1) GN=murC PE=3 SV=1
Length = 462
Score = 247 bits (631), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 155/428 (36%), Positives = 234/428 (54%), Gaps = 40/428 (9%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQG-FEVSGSDLVWSSYMEGLLEAGANLHIGH 127
+ + + +HF+GIGG+G+S +A + L+ G ++VSGSD+ S+ ++ L GA +IGH
Sbjct: 1 MQLQGKDKKVHFIGIGGAGMSGIATVMLEMGGYQVSGSDIKRSAVIDRLENLGAKCNIGH 60
Query: 128 SVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS 187
SNI +AVV S+AI +N EIL + +G+P+ +R LA+L ++ IAV+
Sbjct: 61 KTSNINNE-----IDAVVYSTAISPENPEILETQRLGIPLIRRGQMLARLMKEKKGIAVA 115
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT SM A +L+ D T I+G + G+ G G+ V EADE DG FL
Sbjct: 116 GAHGKTTTTSMTALILEENSFDPTIIIGGDLSNI-GGNAKLGQGEYMVAEADESDGSFLL 174
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
L P++AVVTN++ +H+D + + + FR+FL ++ G VIC D + +
Sbjct: 175 LDPNIAVVTNIEDDHLDYYGTRENIAKAFRQFLAKLSAEGLAVICLDDPVLKEIT----- 229
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR 367
TGL VV+ S G G DY+I + N V G Y ER
Sbjct: 230 -TGLTCQ--VVTYGS---LGSGADYQIKV--LETRN---------GVNQGEVYFQEER-- 270
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
L + L +PG HN+LN++A +A IG R + + L KF G RRF +IG
Sbjct: 271 -LGMLELHVPGYHNLLNAMAAVA-----IG--RHLNLDFEKIARALRKFTGAKRRFQVIG 322
Query: 428 TIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ G + DD+AHHPTEV+A LQAAR P + ++ +FQPH YSR L +F + +
Sbjct: 323 KVNGITVVDDYAHHPTEVKATLQAARTSHPGR-IVTIFQPHRYSRTKQLFKEFGQSFTNG 381
Query: 488 DQVVVSAV 495
D ++++ +
Sbjct: 382 DLIILTDI 389
>sp|Q313Q2|MURC_DESDG UDP-N-acetylmuramate--L-alanine ligase OS=Desulfovibrio
desulfuricans (strain G20) GN=murC PE=3 SV=1
Length = 454
Score = 247 bits (631), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 149/419 (35%), Positives = 215/419 (51%), Gaps = 43/419 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH VGIGG+G+ +A++ L GFEV GSD+ S + L GA++ IGH N+
Sbjct: 8 IHMVGIGGTGMCGIAEVLLNLGFEVRGSDMNDSPSVRRLRRLGADIFIGHGAENVTD--- 64
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V S+A+ DN E+ A+ G+PI R LA+L IA++G+HGK+TT S
Sbjct: 65 ---AQVLVKSTAVSMDNPEVQAAQEKGIPIIPRAEMLAELMRLRKGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+ A + G D T I+G + + + G G+ + EADE DG FL LSP V VVTN
Sbjct: 122 LTAAIFDEAGTDPTVIIGGRLNAYGSNARL-GEGEFLLAEADESDGSFLCLSPVVNVVTN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D +HVD + D+ A+ + F F+ ++ G V+CGD R LL QIK+
Sbjct: 181 VDLDHVDFYHDQQAIDTAFINFMNKVPFYGMNVVCGDDAGVRRLLPQIKR---------- 230
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESV-CPNVQGGSDYILCERGRPLAQISLQI 376
++TYGF N AE+V C S + + G L +++L
Sbjct: 231 ---------------PVLTYGFGPDNQLRAETVTCGET---SRFRVLLHGEDLGEVNLVQ 272
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG HNVLN+LA I L + CL+ L+ F GV RRF+ G G + D
Sbjct: 273 PGRHNVLNALAAIGVGL------ETGIAADVCLR-GLANFRGVGRRFERKGERGGVLVVD 325
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+ HHP E+ A L AR +P + L+ FQPH +SR L DF A D+++++ +
Sbjct: 326 DYGHHPAEIAATLATARTCYPGRRLVVAFQPHRFSRTKALFGDFCKAFDNVDKLLLTEI 384
>sp|A8MK48|MURC_ALKOO UDP-N-acetylmuramate--L-alanine ligase OS=Alkaliphilus oremlandii
(strain OhILAs) GN=murC PE=3 SV=1
Length = 465
Score = 245 bits (625), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 142/421 (33%), Positives = 229/421 (54%), Gaps = 45/421 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH +GIGG +SA+A++ L QG+ VSGSD+ S+ + L GA + IGH+ N++
Sbjct: 14 IHLIGIGGISMSAIAEILLNQGYRVSGSDMNDSNIINKLRAHGAEIFIGHNEDNVKD--- 70
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYN-LIAVSGSHGKSTTA 196
P+ VV ++AI + N E + AK +P R L + + Y IAVSGSHGK+TT
Sbjct: 71 ---PDLVVYTAAIKEHNPERMAAKERNIPQIDRAEMLGIIMKNYKKAIAVSGSHGKTTTT 127
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
S+++ +++ D T +VG + + G+I G ++F+ EA EY FL P + ++
Sbjct: 128 SLISLIMEYSNLDPTIMVGGELDEIG-GNIKIGNSEHFITEACEYVESFLKFYPFIGIIL 186
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
N+D +H+D F+D + +K FR+F+ I G L+ GD + +L I+ +
Sbjct: 187 NIDEDHLDYFKDLNHIKEAFRKFINLIPQEGFLIANGDDANVQEILHSIECN-------- 238
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+ITYG S N + A ++ G + + +G + L I
Sbjct: 239 -----------------LITYGLDSSNTFVARNISFTNDGYPIFTVDFKGESMGTFELNI 281
Query: 377 PGVHNVLNSLAVIAT--VLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHI 434
PG HN+ N+LA IAT +L + + Q+H + KF G+ RRFD++G + GC I
Sbjct: 282 PGKHNIYNALASIATAYLLGVEPSEIQNH---------IKKFRGIHRRFDILGEVKGCKI 332
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSA 494
DD+AHHP E+ A L+AA+ +P+ + VFQPHT+SR L +DF+ + + AD ++++
Sbjct: 333 VDDYAHHPVEISATLEAAKN-YPHNKIWCVFQPHTFSRTKALLEDFSRSFTNADHIIITD 391
Query: 495 V 495
+
Sbjct: 392 I 392
>sp|A4XGE5|MURC_CALS8 UDP-N-acetylmuramate--L-alanine ligase OS=Caldicellulosiruptor
saccharolyticus (strain ATCC 43494 / DSM 8903) GN=murC
PE=3 SV=1
Length = 455
Score = 244 bits (623), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 152/417 (36%), Positives = 231/417 (55%), Gaps = 41/417 (9%)
Query: 80 FVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSR 139
+GIGG +SA+A + G V GSD+ S L E G N++IGH ++I+G++
Sbjct: 6 LIGIGGISMSAIALILKNHGHIVEGSDMQESITTRMLREKGINVYIGHDENHIKGDE--- 62
Query: 140 FPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKY-NLIAVSGSHGKSTTASM 198
V+ ++AIP+DN E++ AK +G+ +Y+R +L L + Y N+IAVSG+HGK+TT SM
Sbjct: 63 ---IVIFTAAIPKDNPELVKAKRLGLKVYERAEFLGMLMKDYKNVIAVSGTHGKTTTTSM 119
Query: 199 LAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNL 258
+ Y+LK + T +VGA V Q G+ G + V+EA EY FL +PS+ V+ N+
Sbjct: 120 IGYILKKALLNPTVLVGAFVKQLG-GNFCIGSSEYLVVEACEYVDSFLNFNPSIGVILNI 178
Query: 259 DWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVV 318
D +H+D F+D +++K FR+F +I G +V D + S+ +KQ+ + +S
Sbjct: 179 DNDHLDYFKDIESIKDSFRKFALKIPQNGFIVANLDDENVYSVASYLKQNV-IYFS---- 233
Query: 319 SNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPG 378
+ +D W +S N +Y V D+ + L I L IPG
Sbjct: 234 TKTKADFWAD---------NITSCNGYYEFDVV-----NKDF------KHLCHIKLNIPG 273
Query: 379 VHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDF 438
HNV NSLA + TL DK E+I +F G SRR + +G I G +YDD+
Sbjct: 274 FHNVYNSLAAFSVAYTLGIDKNTIKEAIF-------EFCGASRRLEKLGKIDGIVLYDDY 326
Query: 439 AHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
AHHPTE+ A L+ + + + +I +FQPHT+SRL L + F +LS AD+V+V+ V
Sbjct: 327 AHHPTEIEATLRTLK-KLAKEKVIVIFQPHTFSRLKSLMEGFVKSLSLADKVIVTDV 382
>sp|A3DIP6|MURC_CLOTH UDP-N-acetylmuramate--L-alanine ligase OS=Clostridium thermocellum
(strain ATCC 27405 / DSM 1237) GN=murC PE=3 SV=1
Length = 469
Score = 244 bits (622), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 146/426 (34%), Positives = 229/426 (53%), Gaps = 44/426 (10%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
N+ +HF+GIGG +S LA++ L GF VSGSD+ S+ L + G ++ GHS NI
Sbjct: 10 NKFKHVHFIGIGGISMSGLAEILLNLGFTVSGSDIRSSNITSKLEKKGIKIYTGHSEENI 69
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVSGSHG 191
+ D VV ++A+ DN E+ AKS+G+P R L ++ +KY +AVSG+HG
Sbjct: 70 KDAD------LVVYTAAVKSDNPELAKAKSLGIPTLDRATLLGEIMKKYPFSVAVSGTHG 123
Query: 192 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPS 251
K+TT SM++ ++ D T +G + G+ G K FV EA EY FL P
Sbjct: 124 KTTTTSMISLIMLKSALDPTIHIGGELDAI-GGNTRIGSNKYFVAEACEYVESFLKFHPY 182
Query: 252 VAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311
+AVV N++ +H+D F+D + +K+ F +F++ + G++V C D Q S+L + +
Sbjct: 183 LAVVLNIEADHLDYFKDIEHIKNAFLKFIRLVPENGYVVACADDQNVLSILKDVHCN--- 239
Query: 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFND-WYAESVCPNVQGGSDYILCERGRPLA 370
IIT+G +S N W AE + N G + + + + +
Sbjct: 240 ----------------------IITFGLNSKNAMWTAEDISFNENGFAAFTVLKDNERIT 277
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
I L++PG+HN+ N+LA IA L SI +K L + G+ RRF+L G
Sbjct: 278 NIQLKVPGIHNISNALASIAACYAL-------GCSIENIKKGLESYTGIHRRFELKGIEN 330
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQ-RFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
+ DD+AHHP+E++A L+AAR +P + VFQPHTY+R L D+F+ A + D+
Sbjct: 331 NIKVVDDYAHHPSEIKATLKAARSGNYPR--IWTVFQPHTYTRTKFLLDEFSKAFKDTDK 388
Query: 490 VVVSAV 495
V+++ +
Sbjct: 389 VIITDI 394
>sp|C4ZBV1|MURC_EUBR3 UDP-N-acetylmuramate--L-alanine ligase OS=Eubacterium rectale
(strain ATCC 33656 / VPI 0990) GN=murC PE=3 SV=1
Length = 459
Score = 243 bits (619), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 152/428 (35%), Positives = 227/428 (53%), Gaps = 41/428 (9%)
Query: 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
+DF ++ IHF+GIGG +S LA++ ++GF +SGSD S + L G + G S
Sbjct: 4 IDF-SKPIHIHFIGIGGISMSGLAEILHEEGFTISGSDSKESDLTKTLAAKGIKVIYGQS 62
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNL-IAVS 187
NI + + VV ++AI + N E AK+ G+P+ R L ++ + Y+ IAV+
Sbjct: 63 ADNI-----TTGIDLVVYTAAIHESNPEFAAAKAAGIPMLTRAELLGQIMDNYDYSIAVA 117
Query: 188 GSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLG 247
G+HGK+TT SM++ +L A D T VG + G++ G + F+ EA EY FL
Sbjct: 118 GTHGKTTTTSMISEILLAAQTDPTISVGGILSSI-HGNLRVGDSEYFISEACEYTNSFLN 176
Query: 248 LSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 307
P +++ N++ EH+D F+D + ++ FR + GG +I G+ ++ + Q
Sbjct: 177 FRPRYSIILNIEAEHLDFFKDINDIRHSFREYASNTLAGGATIINGEIDRYEEIVAGLPQ 236
Query: 308 DTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR 367
KIITYGF S D+Y E++ + + + + +G
Sbjct: 237 -------------------------KIITYGFDSKYDFYPENITYDDKACASFTAMRQGS 271
Query: 368 PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIG 427
PL + L +PG HNV N+LA IA TL D+ ESI L KF G RRF G
Sbjct: 272 PLFDVKLSVPGAHNVSNALAAIALSTTLGLDE----ESILT---GLDKFGGADRRFQYKG 324
Query: 428 TIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEA 487
+ G I DD+AHHPTE+RA L AA Q++P+ L+ FQPHTYSR +DFA+ LS A
Sbjct: 325 KVNGVTIIDDYAHHPTEIRATLTAA-QKYPHDRLVLCFQPHTYSRTKAFLNDFADVLSMA 383
Query: 488 DQVVVSAV 495
D VV++ +
Sbjct: 384 DVVVLADI 391
>sp|Q67K97|MURC_SYMTH UDP-N-acetylmuramate--L-alanine ligase OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=murC PE=3 SV=1
Length = 482
Score = 241 bits (614), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 156/432 (36%), Positives = 238/432 (55%), Gaps = 51/432 (11%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG-HSV 129
K RK +HF+G+GG G+SALA + ++G VSGSD+ S+ + L EAG +HIG H
Sbjct: 2 LKARK--VHFIGVGGYGMSALAMVLKQRGTAVSGSDVAASARTQRLAEAGVEVHIGAHDA 59
Query: 130 SNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGS 189
++I+G D VV S+ +P+DN E+ A++ G+ + R LA+ + IAV+G+
Sbjct: 60 AHIEGAD------VVVYSTQVPEDNPELAAARARGLRVLHRSELLAEFLNGRS-IAVAGT 112
Query: 190 HGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLS 249
HGK+TT+SM+A +L+ G D T ++G + + G+ G G V EADE D FL
Sbjct: 113 HGKTTTSSMVACLLEKAGLDPTILLGGDL-EVIGGTGKAGRGDWVVAEADESDRSFLRYH 171
Query: 250 PSVAVVTNLDWEHVDIFEDEDA-VKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQD 308
P VAVVTN++ EH++ +E A ++ FR+FL+Q++ GG +C D RS+ +++
Sbjct: 172 PRVAVVTNVEPEHLEFWEGSFARIQEGFRQFLRQVQPGGLAALCADDPTLRSIGQELRNQ 231
Query: 309 TGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP 368
G+ + ++ YG +W AE++ P + G Y GR
Sbjct: 232 PGVVH--------------------VVFYGTHPEAEWRAENIRP-WEKGIVYDCVRDGRL 270
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDK-----RQSHESIACLKLPLSKFMGVSRRF 423
L ++ L IPG HN LNSL + + GD RQ E+ L F RRF
Sbjct: 271 LGEVRLPIPGRHNALNSLGAL-----VAGDYAGLSFRQMQET-------LLSFGNARRRF 318
Query: 424 DLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANA 483
++ + G + DD+AHHPTE+RA L AAR++ + ++AVFQP YSR L D+FA A
Sbjct: 319 EVWADVDGIRVVDDYAHHPTEIRATLAAAREQ-AGRRVVAVFQPQRYSRTHWLMDEFATA 377
Query: 484 LSEADQVVVSAV 495
+AD +V++ +
Sbjct: 378 FQDADVLVLTRI 389
>sp|Q2IG30|MURC_ANADE UDP-N-acetylmuramate--L-alanine ligase OS=Anaeromyxobacter
dehalogenans (strain 2CP-C) GN=murC PE=3 SV=1
Length = 458
Score = 241 bits (614), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 147/426 (34%), Positives = 232/426 (54%), Gaps = 43/426 (10%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
F++R+ IHFVG+GG G+S +A++ L G+ VSGSDL S L G ++ GH+
Sbjct: 4 FRSRQAKIHFVGVGGIGMSGIAEVLLNLGYTVSGSDLRESETTRRLAGLGGHISYGHAAE 63
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N+ D VV SSA+ +DN E+L A+ +P+ R LA+L +A++GSH
Sbjct: 64 NVLQVD------VVVISSAVKRDNPEVLEARRRKIPVIPRAEMLAELMRLKYGVAIAGSH 117
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT SM A++L G D TA+VG V F + G G V+EADE DG FL + P
Sbjct: 118 GKTTTTSMAAHLLAHAGLDPTAVVGGKVNAFGSNAKL-GKGDYMVVEADESDGSFLRIPP 176
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
++A+VTN+D EH+D ++ DA++ F F+ ++ G ++C D +S+L +++
Sbjct: 177 TIAIVTNIDPEHLDHWKTPDALRRGFVDFVNRVPFYGLAILCIDHPTVQSILPDVEK--- 233
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS-DYILCERGRPL 369
+++TYG S D+ AE++ + G + + R L
Sbjct: 234 ----------------------RVVTYGESHQADYRAEAI--ELSGHAVRFDAFRRDEAL 269
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
+ + + G HN LN+LAVIA +GD+ + + L F GV RRF + G +
Sbjct: 270 GRFEVAMVGRHNALNALAVIA-----LGDEMGIPPLVT--REALRSFQGVQRRFTVRGEV 322
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
G + DD+ HHP EV+A LQ AR+ F + ++ +FQPH Y+R L +FA A ++AD
Sbjct: 323 AGVTVVDDYGHHPAEVKATLQGAREAFKRR-VVCLFQPHRYTRTRDLMAEFATAFNDADV 381
Query: 490 VVVSAV 495
++++ +
Sbjct: 382 LLLTDI 387
>sp|B2VA52|MURC_SULSY UDP-N-acetylmuramate--L-alanine ligase OS=Sulfurihydrogenibium sp.
(strain YO3AOP1) GN=murC PE=3 SV=1
Length = 454
Score = 241 bits (614), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 151/431 (35%), Positives = 219/431 (50%), Gaps = 57/431 (13%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
F+ + IHF+GIGGSG++ +A+L L QG+ ++GSDL S +E L GA + IGHS
Sbjct: 2 FRGKVRKIHFIGIGGSGMNGIAELLLNQGYTITGSDLKESPTIERLRNLGAKIFIGHSEE 61
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N++ D VV SSA+ DN E++ AK +G+P R LA+L IA++GSH
Sbjct: 62 NVKDAD------VVVYSSAVKPDNPEMIKAKQLGIPTIPRGEMLAELMRFKYGIAIAGSH 115
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT SM+ VL G D T ++G + + + G G+ V E+DE DG FL L+P
Sbjct: 116 GKTTTTSMVGTVLGKTGFDPTVVIGGKLEAYGSNAKL-GRGEFLVTESDESDGSFLKLTP 174
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
++ + N+D EH+ ++D + +K F F ++ G + D + +S+L I++
Sbjct: 175 TIVSINNIDLEHIGFYKDLEDIKKAFVAFANKVPFYGAAAVNIDDENVKSILPYIER--- 231
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR--- 367
K+I +GFS D A V E GR
Sbjct: 232 ----------------------KVIKFGFSEDADIRAYDV-----------RLENGRYKF 258
Query: 368 ---PLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFD 424
+I L +PG+HNV N+LA IA L +K L F RRF+
Sbjct: 259 KVNDFGEIHLSVPGIHNVYNALATIAICNEL-------SVPFCVIKESLENFKNAKRRFE 311
Query: 425 LIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANAL 484
I + DD+AHHPTE++A L AAR F ++ +IAVFQPH YSRL L ++FA A
Sbjct: 312 -IKYSNDIIVIDDYAHHPTELKATLSAARDYFKDRRIIAVFQPHRYSRLNALFEEFAKAF 370
Query: 485 SEADQVVVSAV 495
D +V+ V
Sbjct: 371 DIPDITIVTEV 381
>sp|B8E324|MURC_DICTD UDP-N-acetylmuramate--L-alanine ligase OS=Dictyoglomus turgidum
(strain Z-1310 / DSM 6724) GN=murC PE=3 SV=1
Length = 464
Score = 239 bits (610), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 146/419 (34%), Positives = 227/419 (54%), Gaps = 43/419 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+GI G+G+SALA + +++G+EVSGSD+ + L G ++ GH+ N+ D
Sbjct: 7 IHFIGIAGTGMSALAYICVERGYEVSGSDIQENISTIRLKSKGVKIYKGHNPENVNNVD- 65
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSAIP DN E ++AK +PI R LA LT++ I V G+HGK+TT S
Sbjct: 66 -----LVVISSAIPPDNEEYVYAKERNIPILHRSDLLADLTKEKKSIIVGGAHGKTTTTS 120
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A VL+ D T +VG + G+ G G+ V E DE DG L L P + V+TN
Sbjct: 121 MIALVLENNKIDPTILVGGELEDI-GGNAKLGNGEYLVAEGDESDGSILKLDPYILVITN 179
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D +H+D ++ + +K F + ++++ GG V+ D + R ++ +IK
Sbjct: 180 IDNDHLDYYKSLEKIKDTFLKVIEKVPKGGFAVLNLDCENVRDIIRKIKNK--------- 230
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
+ TYGFS+ D+ A+++ N+ GS++ + R L ++ L++P
Sbjct: 231 ---------------EYYTYGFSNA-DFKADNIVLNLS-GSEFDVYFRNEKLGRVKLRVP 273
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY-GCHIYD 436
G HN+LNSL+ IA L D + ++ L +F GV RR L G I ++D
Sbjct: 274 GKHNILNSLSAIAVSKILGLDFETTTKA-------LERFQGVQRRIQLKGIIEDDILVFD 326
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+ HHPTE++A L+ R N+ L+ VFQPH Y+R L + A ALS D ++++ +
Sbjct: 327 DYGHHPTEIKATLETL--RLYNRRLVVVFQPHRYTRTYFLSKEIAEALSLGDVIILTEI 383
>sp|A7GJE2|MURC_CLOBL UDP-N-acetylmuramate--L-alanine ligase OS=Clostridium botulinum
(strain Langeland / NCTC 10281 / Type F) GN=murC PE=3
SV=1
Length = 458
Score = 239 bits (609), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 150/434 (34%), Positives = 226/434 (52%), Gaps = 55/434 (12%)
Query: 70 DF-KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
DF K++ IHF+GIGG +S LA++ L F +SGSD+ S E L + GA ++IGH
Sbjct: 4 DFIKDKNKHIHFIGIGGISMSGLAEILLYNNFSISGSDMNSSPITEKLKDKGAKIYIGHK 63
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAV 186
NI+ D +V ++AI DN EI+ AK + + R +L L + KYN IA+
Sbjct: 64 KENIKDAD------LIVYTAAIASDNPEIIEAKEKNIKLMDRADFLGNLMKGYKYN-IAI 116
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
SG+HGK+TT SML++V D T +VG ++ +G++ G F+ EA EY FL
Sbjct: 117 SGTHGKTTTTSMLSHVALKANVDPTILVGGNL-DIINGNVRVGESDFFITEACEYKSSFL 175
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 306
P + V+ N+D +H+D ++D D +K+ F +F+K I G+LV G+ + +S++ +
Sbjct: 176 KFFPYIGVILNIDADHLDYYKDLDDIKNAFSKFIKLIPKDGYLVAYGEDKNIQSIIKEA- 234
Query: 307 QDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSS-----FNDWYAESVCPNVQGGSDYI 361
+ +ITYG +S N Y E C N +
Sbjct: 235 ------------------------NCNVITYGINSGDIQAHNIEYDEKACGN------FD 264
Query: 362 LCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSR 421
+ + + L + L +PG HN+LNSLA I L + E I F G R
Sbjct: 265 VVKDNQKLFSVKLNVPGKHNILNSLASICIGLASNMKDKDIIEGI-------ESFFGTHR 317
Query: 422 RFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFA 481
RF+L G + DD+AHHPTE+ A L AA+ ++P+ L VFQPHTYSR + L DDF
Sbjct: 318 RFELKGCKNNITVIDDYAHHPTEISATLDAAK-KYPHNKLFCVFQPHTYSRTLTLFDDFT 376
Query: 482 NALSEADQVVVSAV 495
AD+++++ +
Sbjct: 377 KCFDNADEIILADI 390
>sp|Q2S9Z3|MURC_HAHCH UDP-N-acetylmuramate--L-alanine ligase OS=Hahella chejuensis
(strain KCTC 2396) GN=murC PE=3 SV=1
Length = 472
Score = 238 bits (608), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 155/425 (36%), Positives = 223/425 (52%), Gaps = 48/425 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGGSG+ +A++ L QG+E+SGSDL S+ L + GA++ GH+ NI G
Sbjct: 17 IHFVGIGGSGMCGIAEVLLNQGYEISGSDLKESATTRRLSDMGASITFGHTAQNIAG--- 73
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
N VV SSA+ +DN E+ A +P+ R LA+L + +A++G+HGK+TT S
Sbjct: 74 ---ANVVVTSSAVAKDNPEVTAANEQRIPVIARAEMLAELMRYRHGVAIAGTHGKTTTTS 130
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A VL G D T ++G + + G + V EADE D FL L+P V+VVTN
Sbjct: 131 LMASVLGEAGLDPTFVIGGRLNSAGTNAKL-GASRYLVAEADESDASFLHLTPMVSVVTN 189
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ + D + +K F FL + G V+C D R ++ ++ +
Sbjct: 190 IDADHMHTYGGDFEKLKQTFVDFLHNLPFYGVAVMCYDDPVVREIIPRVGR--------- 240
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER--GRPLAQISL 374
+ITYGF+ D A + QG +R G P +ISL
Sbjct: 241 ----------------SVITYGFNEKADVRAVDIAQ--QGMQTSFTAKRPGGHPDLRISL 282
Query: 375 QIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY---- 430
+PG HNVLN+LAVIA D+ + E+I L+KF GV RRF + G
Sbjct: 283 NMPGKHNVLNALAVIAVAT----DEGIADEAIVS---ALNKFQGVGRRFQVYGNYPVDEG 335
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
+ DD+ HHP EV A ++A R +P K L+AVFQPH Y+R L +DF LS+ D +
Sbjct: 336 SVMLVDDYGHHPREVDATIKAIRDGWPEKRLVAVFQPHRYTRTRDLYEDFVQVLSKVDVL 395
Query: 491 VVSAV 495
V+ V
Sbjct: 396 VLMDV 400
>sp|B1IH05|MURC_CLOBK UDP-N-acetylmuramate--L-alanine ligase OS=Clostridium botulinum
(strain Okra / Type B1) GN=murC PE=3 SV=1
Length = 458
Score = 238 bits (607), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 148/434 (34%), Positives = 226/434 (52%), Gaps = 55/434 (12%)
Query: 70 DF-KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
DF K++ IHF+GIGG +S LA++ L F +SGSD+ S E L + GA ++IGH
Sbjct: 4 DFIKDKNKHIHFIGIGGISMSGLAEILLYNNFSISGSDMNSSPITEKLKDKGAKIYIGHK 63
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAV 186
N++ D +V ++AI DN EI+ AK + + R +L L + KYN IA+
Sbjct: 64 KENVKNAD------LIVYTAAIASDNPEIIEAKEKNIKLMDRADFLGNLMKGYKYN-IAI 116
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
SG+HGK+TT SML++V D T +VG ++ +G++ G F+ EA EY FL
Sbjct: 117 SGTHGKTTTTSMLSHVALKANVDPTILVGGNL-DIINGNVRVGESDFFITEACEYKSSFL 175
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 306
P + V+ N+D +H+D ++D D +K+ F +F+K I G+LV G+ + +S++ +
Sbjct: 176 KFFPYIGVILNIDADHLDYYKDLDDIKNAFSKFIKLIPKDGYLVAYGEDKNIQSIIKEA- 234
Query: 307 QDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSS-----FNDWYAESVCPNVQGGSDYI 361
+ +ITYG +S N Y E C N +
Sbjct: 235 ------------------------NCNVITYGINSGDIQAHNIEYDEKACGN------FD 264
Query: 362 LCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSR 421
+ + + L + L +PG HN+LNSLA I L + E I F G R
Sbjct: 265 VVKDNQKLFSVKLNVPGKHNILNSLASICIGLASDMKDKDIIEGI-------ESFFGTHR 317
Query: 422 RFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFA 481
RF+L G + DD+AHHPTE+ A L AA+ ++P+ + VFQPHTYSR + L DDF
Sbjct: 318 RFELKGCKNNITVIDDYAHHPTEISATLDAAK-KYPHNKMFCVFQPHTYSRTLTLFDDFT 376
Query: 482 NALSEADQVVVSAV 495
AD+++++ +
Sbjct: 377 KCFDNADEIILADI 390
>sp|B8FBR7|MURC_DESAA UDP-N-acetylmuramate--L-alanine ligase OS=Desulfatibacillum
alkenivorans (strain AK-01) GN=murC PE=3 SV=1
Length = 456
Score = 238 bits (606), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 155/421 (36%), Positives = 227/421 (53%), Gaps = 42/421 (9%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
+K IHFVGIGG G+S +A+L L G++VSGSD+ S + L + G ++ GH N+
Sbjct: 3 RKKYSIHFVGIGGIGMSGIAELLLNLGYQVSGSDIKESDITQRLAKLGGTIYRGHRAENV 62
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
+G D VV SSAI Q+N E A+ G+P+ R LA+L +A++G+HGK
Sbjct: 63 KGCD------VVVVSSAIRQENPETASAREQGIPVIPRAEMLAELMRLKYSVAIAGAHGK 116
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+TT S++A VL A G D T ++G + + G G+ V EADE DG FL +SPS+
Sbjct: 117 TTTTSIVADVLAAGGLDPTVVIGGKLLSIGSNAKL-GHGEFIVAEADESDGSFLKMSPSI 175
Query: 253 AVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
AVVTN+D EH+D ++D D +K F +F+ +I G V+C DS+ + L+ I +
Sbjct: 176 AVVTNIDREHMDHYKDMDEIKDAFAQFVDKIPFYGLSVLCLDSEPVQDLIPFINK----- 230
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPLAQ 371
+ +TYG ++ D A V +G S + + + L +
Sbjct: 231 --------------------RYVTYGLTTQADLQAGDVT--TEGLTSRFTVRHNKKRLGR 268
Query: 372 ISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG 431
I+L +PG+HNV NSLA IA L L + +K L GV RR + G + G
Sbjct: 269 ITLNLPGLHNVYNSLASIAVGLEL-------NVPFENIKAALESLSGVHRRLETKGKVGG 321
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+ HHPTE+R LQA +P + + +FQPH YSR L +DFA + +AD +V
Sbjct: 322 IVVMDDYGHHPTEIRTTLQAVNDSYPERRVGVIFQPHRYSRTQSLFEDFARSFYQADYLV 381
Query: 492 V 492
V
Sbjct: 382 V 382
>sp|B5ELC2|MURC_ACIF5 UDP-N-acetylmuramate--L-alanine ligase OS=Acidithiobacillus
ferrooxidans (strain ATCC 53993) GN=murC PE=3 SV=1
Length = 464
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 153/417 (36%), Positives = 226/417 (54%), Gaps = 37/417 (8%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH VGIGGSG+ +A++ L G+ VSGSDL + L + GA + GH +N++G D
Sbjct: 8 IHMVGIGGSGMRGIAEVLLNLGYAVSGSDLRPGNSTLRLTDLGARIFSGHEAANVRGAD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSAIP+ N E+ A+ + +P+ +R LA+L IA++G+HGK+TT S
Sbjct: 67 -----VVVISSAIPESNPEVQAARELRIPVIRRAEMLAELMRFKQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A +L A G D T ++G + + G G+ V EADE D FL LSP +AVVTN
Sbjct: 122 LVASILGAGGLDPTFVIGGRLKSAGTHAAL-GSGEYLVAEADESDASFLYLSPVMAVVTN 180
Query: 258 LDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H++ + D ++ F +FL+++ G V+C D L+ +++ L+Y G
Sbjct: 181 IDADHMETYGGSLDNLRGAFLQFLQRLPFYGLAVLCTDEAVVAGLIPELRTPV-LRYGFG 239
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+DL Q D + G S F W + SDY+ + L I
Sbjct: 240 A----DADL--QARDVTVQGIG-SRFAVWR--------RVDSDYVHW------LDVELGI 278
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG HNVLN+LA I I K ES + L+ F GV RRF+L+GT G + D
Sbjct: 279 PGRHNVLNALAAIG-----IASKVGIPES--TIATALADFRGVGRRFELVGTFDGITVVD 331
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVS 493
D+ HHP E+ A + AAR +P + L+ FQPH YSR L DF ++L+ AD+V+++
Sbjct: 332 DYGHHPREIAATIAAARSVWPERPLVVAFQPHRYSRTQALFADFVSSLAAADRVILT 388
>sp|B7J3V1|MURC_ACIF2 UDP-N-acetylmuramate--L-alanine ligase OS=Acidithiobacillus
ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455)
GN=murC PE=3 SV=1
Length = 464
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 153/417 (36%), Positives = 226/417 (54%), Gaps = 37/417 (8%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IH VGIGGSG+ +A++ L G+ VSGSDL + L + GA + GH +N++G D
Sbjct: 8 IHMVGIGGSGMRGIAEVLLNLGYAVSGSDLRPGNSTLRLTDLGARIFSGHEAANVRGAD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSAIP+ N E+ A+ + +P+ +R LA+L IA++G+HGK+TT S
Sbjct: 67 -----VVVISSAIPESNPEVQAARELRIPVIRRAEMLAELMRFKQGIAIAGTHGKTTTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
++A +L A G D T ++G + + G G+ V EADE D FL LSP +AVVTN
Sbjct: 122 LVASILGAGGLDPTFVIGGRLKSAGTHAAL-GSGEYLVAEADESDASFLYLSPVMAVVTN 180
Query: 258 LDWEHVDIFEDE-DAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H++ + D ++ F +FL+++ G V+C D L+ +++ L+Y G
Sbjct: 181 IDADHMETYGGSLDNLRGAFLQFLQRLPFYGLAVLCTDEAVVAGLIPELRTPV-LRYGFG 239
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+DL Q D + G S F W + SDY+ + L I
Sbjct: 240 A----DADL--QARDVTVQGIG-SRFAVWR--------RVDSDYVHW------LDVELGI 278
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
PG HNVLN+LA I I K ES + L+ F GV RRF+L+GT G + D
Sbjct: 279 PGRHNVLNALAAIG-----IASKVGIPES--TIATALADFRGVGRRFELVGTFDGITVVD 331
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVS 493
D+ HHP E+ A + AAR +P + L+ FQPH YSR L DF ++L+ AD+V+++
Sbjct: 332 DYGHHPREIAATIAAARSVWPERPLVVAFQPHRYSRTQALFADFVSSLAAADRVILT 388
>sp|Q2S527|MURC_SALRD UDP-N-acetylmuramate--L-alanine ligase OS=Salinibacter ruber
(strain DSM 13855 / M31) GN=murC PE=3 SV=1
Length = 475
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 144/420 (34%), Positives = 228/420 (54%), Gaps = 43/420 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H VGIGG G+S++A++ L +G++V+GSDL S E L GA +H GH+ + D
Sbjct: 16 VHMVGIGGIGMSSIAEVLLNRGYDVTGSDLERSDVTERLEAEGATIHEGHAAEQVGTAD- 74
Query: 138 SRFPNAVVASSAI-PQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
VV SSA+ P +N E A+ + + R L +L + V+G+HGK+TT
Sbjct: 75 -----VVVYSSAVDPDENPETREAERRRISLIPRAEMLGELIRMKFGVGVAGTHGKTTTT 129
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
SM V+ G D T IVG V F +I G G V+EADEYD FL L+PS+AV+T
Sbjct: 130 SMAGLVVAEGGFDPTVIVGGKVTAFGSNAI-TGEGDVLVIEADEYDRTFLRLTPSLAVIT 188
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+++ +H+D++ED A+++ F ++ + G ++C D ++++ +++
Sbjct: 189 SIEEDHLDVYEDLAAIQASFTQYANSVPFFGAAILCLDDPNVQAIVGDVER--------- 239
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPLAQISLQ 375
+++TYG + + E+V +G + + + RG L I L
Sbjct: 240 ----------------RVVTYGTTRQAEVRGENV--RREGMTTRFDVVVRGERLGTIELH 281
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435
+PG+HNV N+LA +A +G + + S ++ L F GV RRF+ G + G +
Sbjct: 282 VPGMHNVRNALAAVA-----VGQELEI--SFERVRDGLGTFTGVRRRFEKKGEVGGITVL 334
Query: 436 DDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
DD+AHHPTE+ A L AA Q FP++ ++AVFQPH YSR D+FA + AD +V++ V
Sbjct: 335 DDYAHHPTEIEATLDAAHQGFPDRRVVAVFQPHMYSRTQNFMDEFACSFFNADMLVLTDV 394
>sp|B4UES2|MURC_ANASK UDP-N-acetylmuramate--L-alanine ligase OS=Anaeromyxobacter sp.
(strain K) GN=murC PE=3 SV=1
Length = 458
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 147/426 (34%), Positives = 229/426 (53%), Gaps = 43/426 (10%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
F++R+ IHFVG+GG G+S +A++ L G+ VSGSDL S L G + GH+
Sbjct: 4 FRSRQAKIHFVGVGGIGMSGIAEVLLNLGYTVSGSDLRESETTRRLAGLGGRISYGHAAE 63
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N+ D VV SSA+ +DN E+L A+ +P+ R LA+L +A++GSH
Sbjct: 64 NVLQVD------VVVISSAVKRDNPEVLEARRRKIPVIPRAEMLAELMRLKYGVAIAGSH 117
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT SM A++L G D TA+VG V F + G G V+EADE DG FL + P
Sbjct: 118 GKTTTTSMAAHLLAHAGLDPTAVVGGKVNAFGSNAKL-GKGDYMVVEADESDGSFLRIPP 176
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
++A+VTN+D EH+D ++ DA++ F F+ ++ G ++C D +S+L +++
Sbjct: 177 TIAIVTNIDPEHLDHWKTPDALRRGFVDFVNRVPFYGLAILCIDHPTVQSILPDVEK--- 233
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS-DYILCERGRPL 369
+ +TYG S D+ AE++ + G + + R L
Sbjct: 234 ----------------------RAVTYGESHQADYRAEAI--ELSGHAVRFDAFRRDEAL 269
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
+ + + G HN LN+LAVIA +GD+ + + L F GV RRF + G
Sbjct: 270 GRFEVAMVGRHNALNALAVIA-----LGDEMGIPPLVT--REALRSFQGVQRRFTVRGEA 322
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
G + DD+ HHP EV+A LQ AR+ F + ++ +FQPH Y+R L +FA A ++AD
Sbjct: 323 AGVTVVDDYGHHPAEVKATLQGAREAFKRR-VVCLFQPHRYTRTRDLMAEFATAFNDADV 381
Query: 490 VVVSAV 495
++++ +
Sbjct: 382 LLLTDI 387
>sp|B8J8E9|MURC_ANAD2 UDP-N-acetylmuramate--L-alanine ligase OS=Anaeromyxobacter
dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=murC PE=3
SV=1
Length = 458
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 147/426 (34%), Positives = 229/426 (53%), Gaps = 43/426 (10%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
F++R+ IHFVG+GG G+S +A++ L G+ VSGSDL S L G + GH+
Sbjct: 4 FRSRQAKIHFVGVGGIGMSGIAEVLLNLGYTVSGSDLRESETTRRLAGLGGRISYGHAAE 63
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N+ D VV SSA+ +DN E+L A+ +P+ R LA+L +A++GSH
Sbjct: 64 NVLQVD------VVVISSAVKRDNPEVLEARRRKIPVIPRAEMLAELMRLKYGVAIAGSH 117
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT SM A++L G D TA+VG V F + G G V+EADE DG FL + P
Sbjct: 118 GKTTTTSMAAHLLAHAGLDPTAVVGGKVNAFGSNAKL-GKGDYMVVEADESDGSFLRIPP 176
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
++A+VTN+D EH+D ++ DA++ F F+ ++ G ++C D +S+L +++
Sbjct: 177 TIAIVTNIDPEHLDHWKTPDALRRGFVDFVNRVPFYGLAILCIDHPTVQSILPDVEK--- 233
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGS-DYILCERGRPL 369
+ +TYG S D+ AE++ + G + + R L
Sbjct: 234 ----------------------RAVTYGESHQADYRAEAI--ELSGHAVRFDAFRRDEAL 269
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
+ + + G HN LN+LAVIA +GD+ + + L F GV RRF + G
Sbjct: 270 GRFEVAMVGRHNALNALAVIA-----LGDEMGIPPLVT--REALRSFQGVQRRFTVRGEA 322
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
G + DD+ HHP EV+A LQ AR+ F + ++ +FQPH Y+R L +FA A ++AD
Sbjct: 323 AGVTVVDDYGHHPAEVKATLQGAREAFKRR-VVCLFQPHRYTRTRDLMAEFATAFNDADV 381
Query: 490 VVVSAV 495
++++ +
Sbjct: 382 LLLTDI 387
>sp|B1KTF0|MURC_CLOBM UDP-N-acetylmuramate--L-alanine ligase OS=Clostridium botulinum
(strain Loch Maree / Type A3) GN=murC PE=3 SV=1
Length = 458
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 148/434 (34%), Positives = 226/434 (52%), Gaps = 55/434 (12%)
Query: 70 DF-KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
DF K++ IHF+GIGG +S LA++ L F +SGSD+ S E L + GA ++IGH
Sbjct: 4 DFIKDKNKHIHFIGIGGISMSGLAEILLYNNFSISGSDMNSSPITEKLKDKGAKIYIGHK 63
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAV 186
N++ D +V ++AI DN EI+ AK + + R +L L + KYN IA+
Sbjct: 64 KENVKDAD------LIVYTAAIASDNPEIIEAKEKNIKLMDRADFLGNLMKGYKYN-IAI 116
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
SG+HGK+TT SML++V D T +VG ++ +G++ G F+ EA EY FL
Sbjct: 117 SGTHGKTTTTSMLSHVALKANVDPTILVGGNL-DIINGNVRVGESDFFITEACEYKSSFL 175
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 306
P + V+ N+D +H+D ++D D +K+ F +F+K I G+LV G+ + +S++ +
Sbjct: 176 KFFPYIGVILNIDADHLDYYKDLDDIKNAFSKFIKLIPKDGYLVAYGEDKNIQSIIKEA- 234
Query: 307 QDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSS-----FNDWYAESVCPNVQGGSDYI 361
+ +ITYG +S N Y E C N +
Sbjct: 235 ------------------------NCNVITYGINSGDIQAHNIEYDEKACGN------FD 264
Query: 362 LCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSR 421
+ + + L + L +PG HN+LNSLA I L + E I F G R
Sbjct: 265 VFKDNQKLFSVKLNVPGKHNILNSLASICIGLASDMKDKDIIEGI-------ESFFGTHR 317
Query: 422 RFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFA 481
RF+L G + DD+AHHPTE+ A L AA+ ++P+ + VFQPHTYSR + L DDF
Sbjct: 318 RFELKGCKNNITVIDDYAHHPTEISATLDAAK-KYPHNKMFCVFQPHTYSRTLTLFDDFT 376
Query: 482 NALSEADQVVVSAV 495
AD+++++ +
Sbjct: 377 KCFDNADEIILADI 390
>sp|Q1D0T1|MURC_MYXXD UDP-N-acetylmuramate--L-alanine ligase OS=Myxococcus xanthus
(strain DK 1622) GN=murC PE=3 SV=1
Length = 472
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 150/427 (35%), Positives = 226/427 (52%), Gaps = 44/427 (10%)
Query: 71 FKNRKG-WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSV 129
FK R +HFVG+GG G+S +A++ L G+ VSGSDL S L+ GA GH
Sbjct: 10 FKTRHAAQVHFVGLGGIGMSGIAEVLLNLGYRVSGSDLRESDITRRLVRMGATFFEGHRA 69
Query: 130 SNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGS 189
N+ D VV SSA+ +DN E++ A+ +P+ R LA+L +AV+GS
Sbjct: 70 QNLIQAD------VVVISSAVRKDNPEVVAARQRKIPVIPRAEMLAELMRLKYAVAVAGS 123
Query: 190 HGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLS 249
HGK+TT SM+A VL A G D TA+VG V D + G + V+EADE DG FL L
Sbjct: 124 HGKTTTTSMVATVLSAAGLDPTAVVGGKV-NVLDSNAKLGKSELMVVEADESDGSFLHLH 182
Query: 250 PSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
PS+A+VTN+D EH+D + D D ++S F F ++ G V+C D+ ++LL +I++
Sbjct: 183 PSIAIVTNIDPEHMDHYGDLDTLQSAFVEFCNRVPFYGLNVLCLDNPNVQALLPRIEK-- 240
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRP 368
+ +TYG S D+ E++ + G + + R
Sbjct: 241 -----------------------RFVTYGSSHMADYRLENI--QLDGFTTRFNAYRREES 275
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
L + +++ G HN N+LAVIA + + ++ L++F GV RRF + G
Sbjct: 276 LGEFRVRMVGAHNAFNALAVIAVA-------EEMDIPLETVRESLAEFGGVQRRFTVRGE 328
Query: 429 IYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
G + DD+ HHPTEV A L AR+ F + ++A FQPH Y+R L +F + +++D
Sbjct: 329 AQGITVVDDYGHHPTEVLATLAGARRAFGRRVVVA-FQPHRYTRTHDLMKEFTTSFNDSD 387
Query: 489 QVVVSAV 495
+ V++V
Sbjct: 388 VLFVTSV 394
>sp|Q8KGD5|MURC_CHLTE UDP-N-acetylmuramate--L-alanine ligase OS=Chlorobium tepidum
(strain ATCC 49652 / DSM 12025 / TLS) GN=murC PE=3 SV=1
Length = 475
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 151/421 (35%), Positives = 227/421 (53%), Gaps = 44/421 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+H VGIGG+G+SA+A+L LK GF VSGSDL ++ L E GA +H GH N+ +D
Sbjct: 12 VHIVGIGGAGMSAIAELLLKSGFAVSGSDLASGEVIDKLRELGAVIHQGHQAENVGASD- 70
Query: 138 SRFPNAVVASSAI-PQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTA 196
VV SSA+ P+ NVEIL A+ +G+P+ KRD L +L + I VSG+HGK+TT
Sbjct: 71 -----VVVYSSAVRPESNVEILAAQKLGIPVIKRDEMLGELMRHKSGICVSGTHGKTTTT 125
Query: 197 SMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVT 256
+M+A +L G T ++G V + GS G GK+ V+EADEYD FL L+P++AV+
Sbjct: 126 AMVATMLLEAGQSPTVMIGG-VSDYLKGSTVVGEGKSMVIEADEYDRAFLKLTPTIAVLN 184
Query: 257 NLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+L+ EH+D + D ++ F F ++ G ++ C D R ++ ++ +
Sbjct: 185 SLESEHMDTYGTMDNLRDCFAEFANKVPFYGRVICCVDWPEIRRIIPRLNR--------- 235
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQI 376
+ T+G D A + P GGS + + G + L +
Sbjct: 236 ----------------RYTTFGIEEHADVMASEIEPG-DGGSTFTVEAFGERYPGVRLNV 278
Query: 377 PGVHNVLNSLAVIATVLTL-IGDKRQSHESIACLKLPLSKFMGVSRRFDL-IGTIYGCHI 434
PG HNVLN+LA + L + + +R + L+++ G+ RRF + G +
Sbjct: 279 PGRHNVLNALAAFSVGLEIGLPPER--------IIAGLARYSGMRRRFQVKYRGADGVLV 330
Query: 435 YDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSA 494
DD+AHHPTEV+A ++AAR + ++AVFQPH YSR +F ALS AD V V+
Sbjct: 331 IDDYAHHPTEVKATVRAARDGWKEHRIVAVFQPHLYSRTAEFAGEFGWALSRADTVYVAG 390
Query: 495 V 495
+
Sbjct: 391 I 391
>sp|Q3AAE7|MURC_CARHZ UDP-N-acetylmuramate--L-alanine ligase OS=Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008) GN=murC PE=3
SV=1
Length = 464
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 147/422 (34%), Positives = 224/422 (53%), Gaps = 48/422 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
+HF+ IGG G+S LA++ +G+ VSGSDL + + L G + IGH N+ +
Sbjct: 18 VHFIAIGGIGMSGLARILQSKGYRVSGSDLKETELTKKLRAEGITVFIGHREENLASD-- 75
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ VV S+A+ QDN E+L AK +G+P+ R LA+L ++ IAV+G+HGK+TT+S
Sbjct: 76 ---VSLVVVSTAVSQDNPELLKAKRLGIPVMHRGELLARLMQEKKGIAVAGTHGKTTTSS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+AYVL+ G D VG + + G G+ V EADE DG FL L P AV+TN
Sbjct: 133 MIAYVLEKEGFDPVIAVGGEIVDLGYNAKA-GQGEYMVAEADESDGSFLKLLPYAAVITN 191
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
++ +H+D ++ + +K F++F IR G V C D+ R +L
Sbjct: 192 IEADHLDYYQSFEEIKKAFKKFADNIRPEGFGVFCWDNLQVREML--------------- 236
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDW----YAESVCPNVQGGSDYILCERGRPLAQIS 373
+G+ + TYGFS +D+ Y E V + + ++
Sbjct: 237 ----------KGYKKRKFTYGFSPGSDFMLRDYREEQNQLVAN-----IYYKNTLEGELR 281
Query: 374 LQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH 433
L++PG HN+LN+ A A VL IG S + L +F G RRF ++G G
Sbjct: 282 LKVPGKHNILNAAAATA-VLRNIG------LSFKAISERLLEFNGAKRRFQILGERNGAL 334
Query: 434 IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVS 493
I DD+AHHPTEV A L+AA+ + ++ ++ VFQPH Y+R +FA L +A++VV++
Sbjct: 335 IVDDYAHHPTEVEATLRAAKL-YKDRDVLVVFQPHRYTRTHFFYKEFARVLVDAEKVVLT 393
Query: 494 AV 495
+
Sbjct: 394 GI 395
>sp|A5I7S3|MURC_CLOBH UDP-N-acetylmuramate--L-alanine ligase OS=Clostridium botulinum
(strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=murC
PE=3 SV=1
Length = 458
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 149/434 (34%), Positives = 225/434 (51%), Gaps = 55/434 (12%)
Query: 70 DF-KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
DF K++ IHF+GIGG +S LA++ L F +SGSD+ S E L + GA ++IGH
Sbjct: 4 DFIKDKNKHIHFIGIGGISMSGLAEILLYNNFSISGSDMNSSPITEKLKDKGAKIYIGHK 63
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAV 186
N++ D +V ++AI DN EI AK + + R +L L + KYN IA+
Sbjct: 64 KENVKDAD------LIVYTAAIASDNPEITKAKEKNIKLMDRADFLGNLMKGYKYN-IAI 116
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
SG+HGK+TT SML++V D T +VG ++ +G++ G F+ EA EY FL
Sbjct: 117 SGTHGKTTTTSMLSHVALKANVDPTILVGGNL-DIINGNVRVGESDFFITEACEYKSSFL 175
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 306
P + V+ N+D +H+D ++D D +K+ F +F+K I G+LV G+ + +S++ +
Sbjct: 176 KFFPYIGVILNIDADHLDYYKDLDDIKNAFSKFIKLIPKDGYLVAYGEDKNIQSIIKEAS 235
Query: 307 QDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSS-----FNDWYAESVCPNVQGGSDYI 361
+ +ITYG +S N Y E C N +
Sbjct: 236 CN-------------------------VITYGINSGDIQAHNIEYDEKACGN------FD 264
Query: 362 LCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSR 421
+ + + L + L +PG HN+LNSLA I L + E I F G R
Sbjct: 265 VVKDNQKLFSVKLNVPGKHNILNSLASICIGLASNMKDKDIIEGI-------ESFFGTHR 317
Query: 422 RFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFA 481
RF+L G + DD+AHHPTE+ A L AA+ ++P+ L VFQPHTYSR + L DDF
Sbjct: 318 RFELKGCKNNITVIDDYAHHPTEISATLDAAK-KYPHNKLFCVFQPHTYSRTLTLFDDFT 376
Query: 482 NALSEADQVVVSAV 495
AD+++++ +
Sbjct: 377 KCFDNADEIILADI 390
>sp|A7FPH5|MURC_CLOB1 UDP-N-acetylmuramate--L-alanine ligase OS=Clostridium botulinum
(strain ATCC 19397 / Type A) GN=murC PE=3 SV=1
Length = 458
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 149/434 (34%), Positives = 225/434 (51%), Gaps = 55/434 (12%)
Query: 70 DF-KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
DF K++ IHF+GIGG +S LA++ L F +SGSD+ S E L + GA ++IGH
Sbjct: 4 DFIKDKNKHIHFIGIGGISMSGLAEILLYNNFSISGSDMNSSPITEKLKDKGAKIYIGHK 63
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAV 186
N++ D +V ++AI DN EI AK + + R +L L + KYN IA+
Sbjct: 64 KENVKDAD------LIVYTAAIASDNPEITKAKEKNIKLMDRADFLGNLMKGYKYN-IAI 116
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
SG+HGK+TT SML++V D T +VG ++ +G++ G F+ EA EY FL
Sbjct: 117 SGTHGKTTTTSMLSHVALKANVDPTILVGGNL-DIINGNVRVGESDFFITEACEYKSSFL 175
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 306
P + V+ N+D +H+D ++D D +K+ F +F+K I G+LV G+ + +S++ +
Sbjct: 176 KFFPYIGVILNIDADHLDYYKDLDDIKNAFSKFIKLIPKDGYLVAYGEDKNIQSIIKEAS 235
Query: 307 QDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSS-----FNDWYAESVCPNVQGGSDYI 361
+ +ITYG +S N Y E C N +
Sbjct: 236 CN-------------------------VITYGINSGDIQAHNIEYDEKACGN------FD 264
Query: 362 LCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSR 421
+ + + L + L +PG HN+LNSLA I L + E I F G R
Sbjct: 265 VVKDNQKLFSVKLNVPGKHNILNSLASICIGLASNMKDKDIIEGI-------ESFFGTHR 317
Query: 422 RFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFA 481
RF+L G + DD+AHHPTE+ A L AA+ ++P+ L VFQPHTYSR + L DDF
Sbjct: 318 RFELKGCKNNITVIDDYAHHPTEISATLDAAK-KYPHNKLFCVFQPHTYSRTLTLFDDFT 376
Query: 482 NALSEADQVVVSAV 495
AD+++++ +
Sbjct: 377 KCFDNADEIILADI 390
>sp|C3KWA4|MURC_CLOB6 UDP-N-acetylmuramate--L-alanine ligase OS=Clostridium botulinum
(strain 657 / Type Ba4) GN=murC PE=3 SV=1
Length = 458
Score = 236 bits (603), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 146/431 (33%), Positives = 225/431 (52%), Gaps = 54/431 (12%)
Query: 72 KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSN 131
K++ IHF+GIGG +S LA++ L F +SGSD+ S + L + GA+++IGH N
Sbjct: 7 KDKNKHIHFIGIGGISMSGLAEILLYHNFTISGSDMNSSPITKKLKDKGAHIYIGHKKEN 66
Query: 132 IQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAVSGS 189
I+ D +V ++AI DN EI+ AK + + R +L L + KYN IA+SG+
Sbjct: 67 IKDAD------LIVYTAAIASDNPEIIEAKEKNIKLMDRADFLGDLMKGYKYN-IAISGT 119
Query: 190 HGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLS 249
HGK+TT SML++V D T +VG ++ +G++ G F+ EA EY FL
Sbjct: 120 HGKTTTTSMLSHVALKANVDPTILVGGNL-DIINGNVRVGKSDFFITEACEYKSSFLKFF 178
Query: 250 PSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
P + + N+D +H+D ++D D +K+ F +F+K I G+LV G+ + +S++ + +
Sbjct: 179 PYIGAILNIDADHLDYYKDLDDIKNAFSKFIKLIPKDGYLVAYGEDKNIQSIIKEASCN- 237
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSS-----FNDWYAESVCPNVQGGSDYILCE 364
+ITYG +S N Y E C N + + +
Sbjct: 238 ------------------------VITYGINSGDIQAHNIEYDEKACGN------FDVVK 267
Query: 365 RGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFD 424
+ L + L +PG HN+LNSLA I L + E I F G RRF+
Sbjct: 268 NNQKLFSVKLNVPGKHNILNSLASICIGLASNMKDKDIIEGI-------ESFFGTHRRFE 320
Query: 425 LIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANAL 484
L G + DD+AHHPTE+ A L AA+ ++P+ L VFQPHTYSR + L DDF
Sbjct: 321 LKGCKNNITVIDDYAHHPTEISATLDAAK-KYPHNKLFCVFQPHTYSRTLTLFDDFTKCF 379
Query: 485 SEADQVVVSAV 495
+AD+++++ +
Sbjct: 380 DKADEIILADI 390
>sp|Q2LR47|MURC_SYNAS UDP-N-acetylmuramate--L-alanine ligase OS=Syntrophus aciditrophicus
(strain SB) GN=murC PE=3 SV=1
Length = 480
Score = 236 bits (602), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 163/433 (37%), Positives = 230/433 (53%), Gaps = 50/433 (11%)
Query: 68 IVDFKNRK-GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG 126
I D RK IHFVGIGG G+S +A++ L G+ VSGSDL S E L GA + G
Sbjct: 14 ITDVMRRKVRHIHFVGIGGIGMSGIAEVLLNLGYTVSGSDLRTSDTTEHLSSLGATVFQG 73
Query: 127 HSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAV 186
H SN+ D VV S+A+ +DN E+L A VP+ R LA+L + IAV
Sbjct: 74 HKASNLTDVD------VVVTSTAVRKDNPEVLEAHRRSVPVIPRAEMLAELLKMKVSIAV 127
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSI----FYGGGKNFVLEADEYD 242
SGSHGK+TT SM+A V+ + G D T ++G + GSI G G+ V EADE D
Sbjct: 128 SGSHGKTTTTSMIATVMASGGLDPTMVIGGKL-----GSIGSNARMGHGEFIVAEADESD 182
Query: 243 GCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLL 302
G FL LSPS+AV+TN+D EH+D + + +K F +F + G V+C D +++L
Sbjct: 183 GSFLKLSPSLAVITNIDREHLDFYRGIEDIKDAFLQFANIVPFYGSAVLCLDDPHIKTIL 242
Query: 303 DQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYIL 362
IK+ K ITYG D+ A+ + N ++Y L
Sbjct: 243 SDIKR-------------------------KTITYGMEPAADYRAQELRFN-GAVTEYEL 276
Query: 363 CERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRR 422
R L ++L +PG+ NV NSLA +A R+ + ++ L ++GV RR
Sbjct: 277 YYRTECLGSVTLSVPGMFNVYNSLATVAVA-------RELDMTFPDIQQGLKSYVGVGRR 329
Query: 423 FDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFAN 482
++ G I G + DD+ HHPTE+ A L AARQ + N+ +I VFQPH Y+R L +F
Sbjct: 330 LEVKGKIAGVTVVDDYGHHPTEISATLAAARQVWKNR-MIVVFQPHRYTRTQALFREFLG 388
Query: 483 ALSEADQVVVSAV 495
A +EAD ++V+ +
Sbjct: 389 AFTEADLLIVTDI 401
>sp|A5N4I2|MURC_CLOK5 UDP-N-acetylmuramate--L-alanine ligase OS=Clostridium kluyveri
(strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=murC PE=3
SV=1
Length = 457
Score = 236 bits (601), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 144/430 (33%), Positives = 240/430 (55%), Gaps = 46/430 (10%)
Query: 70 DF-KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
DF KN+K +HF+GIGG +SALA++ L++GF+VSGSD+ S E L GA ++IG
Sbjct: 4 DFIKNKK--VHFIGIGGISMSALAEILLEKGFKVSGSDVKSSEATERLELKGAKVYIGQI 61
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAV 186
NI + + VV ++AI ++N E+L AK + +P+ R +L ++ + KYN IAV
Sbjct: 62 SQNITSD-----IDLVVYTAAISKNNEELLKAKDLNIPLMDRAEFLGEIMKGHKYN-IAV 115
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
SG+HGK+TT SML+ + D T +VG ++ G++ G F+ EA EY FL
Sbjct: 116 SGTHGKTTTTSMLSSITLEANLDPTILVGGNL-DIIGGNVRIGNSPFFITEACEYKESFL 174
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 306
P + ++ N+D +H+D ++D + +++ F +F K I G+LV C D + ++ +
Sbjct: 175 KFFPFIGIILNIDADHLDYYKDIEEIQNAFIKFGKLIPKEGYLVCCADDRRMEKIISNV- 233
Query: 307 QDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERG 366
+ +++YG + D A+++C + +G + + + +
Sbjct: 234 ------------------------NCNVMSYGIET-GDITAKNICFDKEGRAFFEVYKSD 268
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
+ L ++L +PG HN+LN+LA I+ L L + S+ + L F G RRF++
Sbjct: 269 KKLFSLNLSVPGEHNILNALASISVSLIL-------NISVDNIINGLKSFKGTHRRFEIK 321
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G G + DD+AHHPTE++A L AA+ +P+K +I VFQPHT+SR + L +F A
Sbjct: 322 GQRKGVVVIDDYAHHPTEIKATLNAAKN-YPHKRIICVFQPHTFSRTISLFKEFTAAFDN 380
Query: 487 ADQVVVSAVL 496
D++++S +
Sbjct: 381 VDELILSDIF 390
>sp|B9DY44|MURC_CLOK1 UDP-N-acetylmuramate--L-alanine ligase OS=Clostridium kluyveri
(strain NBRC 12016) GN=murC PE=3 SV=1
Length = 457
Score = 236 bits (601), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 144/430 (33%), Positives = 240/430 (55%), Gaps = 46/430 (10%)
Query: 70 DF-KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS 128
DF KN+K +HF+GIGG +SALA++ L++GF+VSGSD+ S E L GA ++IG
Sbjct: 4 DFIKNKK--VHFIGIGGISMSALAEILLEKGFKVSGSDVKSSEATERLELKGAKVYIGQI 61
Query: 129 VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAV 186
NI + + VV ++AI ++N E+L AK + +P+ R +L ++ + KYN IAV
Sbjct: 62 SQNITSD-----IDLVVYTAAISKNNEELLKAKDLNIPLMDRAEFLGEIMKGHKYN-IAV 115
Query: 187 SGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFL 246
SG+HGK+TT SML+ + D T +VG ++ G++ G F+ EA EY FL
Sbjct: 116 SGTHGKTTTTSMLSSITLEANLDPTILVGGNL-DIIGGNVRIGNSPFFITEACEYKESFL 174
Query: 247 GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIK 306
P + ++ N+D +H+D ++D + +++ F +F K I G+LV C D + ++ +
Sbjct: 175 KFFPFIGIILNIDADHLDYYKDIEEIQNAFIKFGKLIPKEGYLVCCADDRRMEKIISNV- 233
Query: 307 QDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERG 366
+ +++YG + D A+++C + +G + + + +
Sbjct: 234 ------------------------NCNVMSYGIET-GDITAKNICFDKEGRAFFEVYKSD 268
Query: 367 RPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI 426
+ L ++L +PG HN+LN+LA I+ L L + S+ + L F G RRF++
Sbjct: 269 KKLFSLNLSVPGEHNILNALASISVSLIL-------NISVDNIINGLKSFKGTHRRFEIK 321
Query: 427 GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSE 486
G G + DD+AHHPTE++A L AA+ +P+K +I VFQPHT+SR + L +F A
Sbjct: 322 GQRKGVVVIDDYAHHPTEIKATLNAAKN-YPHKRIICVFQPHTFSRTISLFKEFTAAFDN 380
Query: 487 ADQVVVSAVL 496
D++++S +
Sbjct: 381 VDELILSDIF 390
>sp|A5D144|MURC_PELTS UDP-N-acetylmuramate--L-alanine ligase OS=Pelotomaculum
thermopropionicum (strain DSM 13744 / JCM 10971 / SI)
GN=murC PE=3 SV=1
Length = 461
Score = 234 bits (597), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 147/426 (34%), Positives = 221/426 (51%), Gaps = 46/426 (10%)
Query: 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNI 132
++K +HF+GIGGSG++ +A + L G+ V+GSDL S+ L GA + H+ N+
Sbjct: 2 DKKRHVHFIGIGGSGMNGIAAIMLGLGYRVTGSDLKPSAATRRLEALGATCYTRHAEENL 61
Query: 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGK 192
D VVAS+AIP DN+E++ A+ G+P+ R LA L + IAV+G+HGK
Sbjct: 62 GDAD------LVVASTAIPPDNIELVEARKRGLPVMHRADLLAWLMRRQKGIAVAGAHGK 115
Query: 193 STTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSV 252
+TT SM A VL+ G D T ++G + + G+ G G+ V EADE DG FL L P +
Sbjct: 116 TTTTSMTALVLEKNGMDPTIVIGGELSEI-GGNAKLGRGEYLVAEADESDGSFLKLDPVI 174
Query: 253 AVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLK 312
++TN++ +H+D + + + + FRRF+ ++ G V C D R LL
Sbjct: 175 EIITNIEDDHLDYYRSVENILAAFRRFMAKVPESGLAVACLDDPRLRELL---------- 224
Query: 313 YSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAE---SVCPNVQGGSDYILCERGRPL 369
G+D +TY + Y + V G Y RG L
Sbjct: 225 ---------------AGYDRPCLTYALDNPEADYTMRNIRLMRQVTAGDVYY---RGGFL 266
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
+ L +PG HN+ N++A +A V +G + E IA L F G RRF L G +
Sbjct: 267 GCLELSVPGRHNLSNAMAAVA-VGRFVG---LAFEGIAA---ALKDFRGAGRRFQLTGEV 319
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
G + DD+AHHP+E++A L+AA Q ++ VFQPH Y+R + L + F A +AD
Sbjct: 320 NGIKVIDDYAHHPSEIKATLKAAGQ-VKTGRVVGVFQPHRYTRTLFLGERFGEAFEDADV 378
Query: 490 VVVSAV 495
V++S +
Sbjct: 379 VIISDI 384
>sp|A8ZXW2|MURC_DESOH UDP-N-acetylmuramate--L-alanine ligase OS=Desulfococcus oleovorans
(strain DSM 6200 / Hxd3) GN=murC PE=3 SV=1
Length = 457
Score = 234 bits (597), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 154/415 (37%), Positives = 216/415 (52%), Gaps = 40/415 (9%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
I+FVGIGG G+S +A+L L G+ VSGSD+ S + L G + GH NI G D
Sbjct: 8 IYFVGIGGIGMSGIAELLLNLGYTVSGSDIRQSDITDRLTGLGGKIFYGHDGKNIGGAD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
VV SSAI DN E+ A+ G+P+ R LA++ I ++G+HGK++T S
Sbjct: 67 -----VVVVSSAIAADNPEVAAAREAGIPVIPRAEMLAEILRLKYSIVIAGAHGKTSTTS 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A VL G D T ++G + ++ G G V EADE DG FL SPS+AVVTN
Sbjct: 122 MVASVLGQGGMDPTVVIGGKLKSIGTNAVL-GHGDYIVAEADESDGSFLKFSPSIAVVTN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D EH+D + D A+ F FL +I G V+C D++ ++L+ IK+
Sbjct: 181 IDREHLDFYPDLAAISKSFLEFLDRIPFYGVAVVCLDNEPLQALVPLIKK---------- 230
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
+ ITYG S+ D A + P + G + + R L I L +P
Sbjct: 231 ---------------RFITYGTSNQADLQARHITP-INGKVRFSVVWRQEELGTIDLGVP 274
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD 437
G HNV N+LA +A L L + A +K L GV RR + G G + DD
Sbjct: 275 GFHNVRNALAAVAVGLEL-------GLAFAVIKEALETMAGVQRRLEKKGETGGVIVVDD 327
Query: 438 FAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+ HHPTE++A LQ RQ + ++ ++ VFQPH YSR L DDF A + D++VV
Sbjct: 328 YGHHPTEIKATLQGVRQHWEDRRVVVVFQPHRYSRTKALFDDFTRAFYQCDELVV 382
>sp|B5YEL2|MURC_DICT6 UDP-N-acetylmuramate--L-alanine ligase OS=Dictyoglomus thermophilum
(strain ATCC 35947 / DSM 3960 / H-6-12) GN=murC PE=3
SV=1
Length = 464
Score = 233 bits (595), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 151/419 (36%), Positives = 231/419 (55%), Gaps = 43/419 (10%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHF+G+ G+G+SALA + ++G+EVSGSD+ + L G ++ GHS +I
Sbjct: 7 IHFIGVAGTGMSALAYICAEKGYEVSGSDIQENISTIRLKSKGVKIYRGHSPEHIN---- 62
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+ VV SSAIP DN E ++AKS +PI R LA+LT++ I V G+HGK+TT S
Sbjct: 63 --DVDVVVVSSAIPPDNEEYVYAKSKNIPILHRSDLLAELTKEKKSIIVGGAHGKTTTTS 120
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A VL+ D T IVG + G+ G G+ V E DE DG L L+P + VVTN
Sbjct: 121 MIALVLENNKTDPTIIVGGELEDI-GGNAKLGSGEYLVAEGDESDGSILKLNPYILVVTN 179
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D +H+D +E+ + +KS F + ++++ G++++ D + R ++ +IK
Sbjct: 180 IDNDHLDYYENIENIKSTFLKVIEKVPEDGYVLLNLDCKNIRDIIGKIK----------- 228
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIP 377
D K TYGFS+ D+ A+++ N GS++ + R L ++ L++P
Sbjct: 229 -------------DKKYYTYGFSNA-DFTADNIVLN-SSGSEFDVYFRNVKLGRVKLKVP 273
Query: 378 GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYG-CHIYD 436
G HN+LNSL+ I L D Q+ ++ L KF GV RR G I ++D
Sbjct: 274 GRHNILNSLSAIGISYILGLDFEQTIKA-------LEKFHGVQRRIQFKGVIENDVLVFD 326
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAV 495
D+ HHPTE+ A L+ R N+ L+ VFQPH Y+R L + A+ALS +D V++ +
Sbjct: 327 DYGHHPTEILATLETL--RLYNRRLVVVFQPHRYTRTYFLSKEIADALSLSDVVILMEI 383
>sp|C1FNF4|MURC_CLOBJ UDP-N-acetylmuramate--L-alanine ligase OS=Clostridium botulinum
(strain Kyoto / Type A2) GN=murC PE=3 SV=1
Length = 458
Score = 233 bits (594), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 144/433 (33%), Positives = 225/433 (51%), Gaps = 58/433 (13%)
Query: 72 KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSN 131
K++ IHF+GIGG +S LA++ L F +SGSD+ S + L + GA+++IGH N
Sbjct: 7 KDKNKHIHFIGIGGISMSGLAEILLYHNFTISGSDMNSSPITKKLKDKGAHIYIGHKKEN 66
Query: 132 IQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAVSGS 189
I+ D +V ++AI DN EI+ AK + + R +L L + KYN IA+SG+
Sbjct: 67 IKDAD------LIVYTAAIASDNPEIIEAKEKNIKLMDRADFLGDLMKGYKYN-IAISGT 119
Query: 190 HGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLS 249
HGK+TT SML++V D T +VG ++ +G++ G F+ EA EY FL
Sbjct: 120 HGKTTTTSMLSHVALKANVDPTILVGGNL-DIINGNVRVGKSDFFITEACEYKSSFLKFF 178
Query: 250 PSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
P + + N+D +H+D + D + +K+ F +F+K I G+LV G+ + +S++ + +
Sbjct: 179 PYIGAILNIDADHLDYYRDLNDIKNAFSKFIKLIPKDGYLVAYGEDKNIQSIIKEANCN- 237
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSS-----FNDWYAESVCPNVQGGSDYILCE 364
+ITYG +S N Y E C N + + +
Sbjct: 238 ------------------------VITYGINSGDIQAHNIEYDEKACGN------FDVVK 267
Query: 365 RGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKL--PLSKFMGVSRR 422
+ L + L +PG HN+LNSLA I L ++ C + + F G RR
Sbjct: 268 DNQKLFSVKLNVPGKHNILNSLASICIGLA---------SNMKCKDIIEGIESFFGTHRR 318
Query: 423 FDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFAN 482
F+L G + DD+AHHPTE+ A L AA+ ++P+ L VFQPHTYSR + L DDF
Sbjct: 319 FELKGCKNNITVIDDYAHHPTEISATLDAAK-KYPHNKLFCVFQPHTYSRTLTLFDDFTK 377
Query: 483 ALSEADQVVVSAV 495
AD+++++ +
Sbjct: 378 CFDNADEIILADI 390
>sp|A0PXK5|MURC_CLONN UDP-N-acetylmuramate--L-alanine ligase OS=Clostridium novyi (strain
NT) GN=murC PE=3 SV=1
Length = 458
Score = 233 bits (594), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 141/427 (33%), Positives = 233/427 (54%), Gaps = 45/427 (10%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K+ +HF+GIGG +S LA++ L G+ VSGSD S + L GA ++IGH+ +
Sbjct: 6 LKDNNKKVHFIGIGGISMSGLAEILLNSGYRVSGSDRSESDLTKHLQAKGAEIYIGHNGN 65
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAVSG 188
N++ D VV ++AIP N E++ A+ + R +L + + KYN IA+SG
Sbjct: 66 NLKDVD------LVVYTAAIPDSNPELVKARECNIQTMDRAEFLGHVMQGHKYN-IAISG 118
Query: 189 SHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGL 248
+HGK+TT SM +++ + D T +VG ++ +G++ G + FV EA EY FL
Sbjct: 119 THGKTTTTSMFSHISLSANLDPTILVGGNLDVI-NGNVRVGNSEYFVTEACEYKASFLKF 177
Query: 249 SPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQD 308
P + V+ N++ +H+D ++D + +++ F +F K I G L++ D + + Q+
Sbjct: 178 YPYIGVILNIEADHLDFYKDINDIQNTFLKFAKLIPNDGFLIVNADDKRCVEVSKQV--- 234
Query: 309 TGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP 368
D +IT+G ++ D A+++ N G + +
Sbjct: 235 ----------------------DCNVITFGINN-GDVRAKNIVFN-NGRPTFDVYRNEEK 270
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
L ++L +PG HN+L++LA I++ L+L + + + LS F G RRF++ G
Sbjct: 271 LFTLTLNVPGNHNILDALASISSALSL-------NVPVDSIIEGLSTFNGAHRRFEIKGK 323
Query: 429 IYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEAD 488
+ G + DD+AHHPTE++A L AA+ FP+K + VFQPHTYSR + L DDFAN+ S AD
Sbjct: 324 VDGITVVDDYAHHPTEIKAALNAAKN-FPHKRVFCVFQPHTYSRTISLFDDFANSFSNAD 382
Query: 489 QVVVSAV 495
+V++ +
Sbjct: 383 TLVLADI 389
>sp|Q0RNN9|MURC_FRAAA UDP-N-acetylmuramate--L-alanine ligase OS=Frankia alni (strain
ACN14a) GN=murC PE=3 SV=1
Length = 588
Score = 233 bits (593), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 135/364 (37%), Positives = 205/364 (56%), Gaps = 41/364 (11%)
Query: 72 KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHS--- 128
+ R +HF+GIGGSGLS LA++ L G +VSGSD S + L G + +G +
Sbjct: 3 RQRTQHVHFLGIGGSGLSPLAQIHLAGGGKVSGSDAEDSPRVATLRARGVPVRVGPAPAA 62
Query: 129 ---VSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIA 185
+ + G D VVASSA+ +D+ EI+ A+S+G+ + +R WL +LT Y L+A
Sbjct: 63 EKIAAELAGVD------VVVASSALAEDHPEIVAARSLGLAVRRRSEWLPELTAGYRLVA 116
Query: 186 VSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCF 245
V+GSHGKSTT++ML VL+A G D TA++GA V Q G+ G G FVLE+DEY G F
Sbjct: 117 VAGSHGKSTTSAMLTLVLRAAGLDPTAVIGAEVSQL-GGNALAGSGDLFVLESDEYGGAF 175
Query: 246 LGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 305
GL P++AV+TN++WEH DIF DE +V++ F F +++R GG LV+CGD ++L ++
Sbjct: 176 AGLEPTIAVITNVEWEHPDIFPDEASVRTAFTAFARRVRPGGRLVVCGDDPGVAAVLAEL 235
Query: 306 KQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG--SDYILC 363
+ G ++ YGF + W A V V G + ++
Sbjct: 236 HRQ------------------GTPAAAPVLDYGFGTDRRWRAVDVA-TVAGDDTARAVVL 276
Query: 364 ERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRF 423
G+ + ++L +PG H++LN+LAV+A L Q+ ++A + G +RRF
Sbjct: 277 HGGQEIGTLTLAVPGRHSLLNALAVLAVATELGVAPAQTLATLAT-------YTGAARRF 329
Query: 424 DLIG 427
+ +G
Sbjct: 330 EFVG 333
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 43/64 (67%)
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
+ I DD+AHHPTE+R L AAR R +AL AV QPHTYSR L D FA A ++AD+
Sbjct: 439 WSLEIIDDYAHHPTEIRLTLAAARARTHGRALWAVLQPHTYSRFAALLDGFATAFADADR 498
Query: 490 VVVS 493
V V+
Sbjct: 499 VYVT 502
>sp|Q87SG3|MURC_VIBPA UDP-N-acetylmuramate--L-alanine ligase OS=Vibrio parahaemolyticus
serotype O3:K6 (strain RIMD 2210633) GN=murC PE=3 SV=1
Length = 485
Score = 232 bits (591), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 145/432 (33%), Positives = 221/432 (51%), Gaps = 61/432 (14%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R IHF+GIGG+G+S +A++ L +G+E++GSDL + E L+ GA + IGH SN++
Sbjct: 21 RVKCIHFIGIGGAGMSGIAEVLLNEGYEITGSDLSENPVTERLVSKGATVFIGHQASNVE 80
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
+ VV S+AI ++N E++ A+ + +PI +R LA+L + IAV+G+HGK+
Sbjct: 81 K------ASVVVVSTAINEENPEVMAARELRIPIVRRAEMLAELMRFRHGIAVAGTHGKT 134
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN--------FVLEADEYDGCF 245
TT +++ + G D P F +G + G N + EADE D F
Sbjct: 135 TTTALVTQIYSEAGLD---------PTFVNGGLVKSAGTNARLGSSRILIAEADESDASF 185
Query: 246 LGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 304
L L P V++VTN++ +H+D + D + +K F FL + G ++C D R L+ +
Sbjct: 186 LHLQPMVSIVTNIEADHMDTYGGDFETLKQTFIDFLHNLPFYGQAIVCIDDPVIRELIPR 245
Query: 305 IKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCE 364
I + ++ITYGFS D E+ Q G + +
Sbjct: 246 ISR-------------------------QVITYGFSDDADVRIENYHQEGQQGK-FTVVR 279
Query: 365 RGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFD 424
+GR I+L IPG HN LN+ A IA E A LK ++ G RRFD
Sbjct: 280 KGRANLDITLNIPGRHNALNASAAIAVA------TEDDIEDDAILK-AMAGTQGTGRRFD 332
Query: 425 LIGTIYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDF 480
+G + + DD+ HHPTEV ++AAR + +K L+ +FQPH YSR L DDF
Sbjct: 333 HLGEFDTGNGHAMLVDDYGHHPTEVDVTIKAARSGWQDKRLVMIFQPHRYSRTRDLYDDF 392
Query: 481 ANALSEADQVVV 492
AN L + D +++
Sbjct: 393 ANVLEQVDVLIM 404
>sp|A6LPI8|MURC_CLOB8 UDP-N-acetylmuramate--L-alanine ligase OS=Clostridium beijerinckii
(strain ATCC 51743 / NCIMB 8052) GN=murC PE=3 SV=1
Length = 459
Score = 231 bits (590), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 141/423 (33%), Positives = 222/423 (52%), Gaps = 43/423 (10%)
Query: 72 KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSN 131
K++ IHF+GIGG +S LA + L G+ VSGSD S+ ++ L +GA ++IGH N
Sbjct: 7 KDKDKKIHFIGIGGISMSGLAAVLLNSGYSVSGSDFKDSAIIDKLRSSGAEIYIGHRREN 66
Query: 132 IQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTE--KYNLIAVSGS 189
I D VV ++AIP DN E+L AK + + R +L ++ + KY+ +A+SG+
Sbjct: 67 INNVD------LVVYTAAIPSDNPELLEAKEKNIALMDRAEFLGQIMKGHKYS-VAISGT 119
Query: 190 HGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLS 249
HGK+T SML+++ A D T +VG + G+ G + F+ EA EY FL
Sbjct: 120 HGKTTCTSMLSHITLADNLDPTILVGGELDAIG-GNFRIGNSEYFLTEACEYKRSFLKFP 178
Query: 250 PSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
P V ++ N+D +H+D ++D D + F +F + I G+LV D Q +L + +T
Sbjct: 179 PYVGIILNIDSDHLDYYKDIDEIADTFLQFSRLIPEDGYLVGYADDQRVNEILSETNCNT 238
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPL 369
++YGFS + A+++ N G + + + + G L
Sbjct: 239 -------------------------LSYGFSDNANLTAKNIHFNTNGCATFDVYKDGNNL 273
Query: 370 AQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI 429
I+L +PG HN+LN+LA I L + S C+ LS G +RF+ G +
Sbjct: 274 FNITLNVPGKHNILNALASICVSLIF-------NISNDCIIEGLSNCKGAHKRFEYKGKL 326
Query: 430 YGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQ 489
G + DD+AHHPTE++A L A+Q NK +FQPHTY+R L D+F ++AD+
Sbjct: 327 NGVTVIDDYAHHPTEIKATLSTAKQMNHNKTY-CIFQPHTYTRTKALFDEFTECFNDADE 385
Query: 490 VVV 492
+++
Sbjct: 386 LIL 388
>sp|B1VHC3|MURC_CORU7 UDP-N-acetylmuramate--L-alanine ligase OS=Corynebacterium
urealyticum (strain ATCC 43042 / DSM 7109) GN=murC PE=3
SV=1
Length = 487
Score = 231 bits (589), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 152/425 (35%), Positives = 224/425 (52%), Gaps = 37/425 (8%)
Query: 79 HFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGS 138
H VGIGG+G+S +A++ L +G+ V+GSD+ S + L AGA + IGH +N+ G G+
Sbjct: 14 HMVGIGGAGMSGIARILLARGYSVTGSDMKDSRSVLALRAAGAEVAIGHDAANVTG--GA 71
Query: 139 RFPNAVVAS-SAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
P VV S +AIP+DN E+ A+ G+PI +R LA+L ++G+HGK++T S
Sbjct: 72 ELPTVVVTSFAAIPKDNPELTAAREAGIPIVRRSDVLAELMSDRRAFLLAGTHGKTSTTS 131
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M ++A G D + +G + + + +G G+ F+ EADE DG FL SP VAV+TN
Sbjct: 132 MAVVGVQAAGLDPSFAIGGQLNRAGTNA-HHGTGEIFIAEADESDGSFLSYSPEVAVITN 190
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVIC----GDSQCARSLLDQIKQDTGLKY 313
++ +H+D + E+A +IF F ++ GG+LV C G + A + T L Y
Sbjct: 191 IEPDHLDYYGTEEAYVAIFDEFATKVTPGGYLVCCLDDPGAAALAARVRAAGTAPTVLGY 250
Query: 314 SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYI---LCERGRPLA 370
++Q D+ II E + P+ +G + + L +
Sbjct: 251 GSRAAADQHPDIPAA----AII------------EEMIPDARGTAAKVRFNLPGQEERYE 294
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
I + IPG H LN +A I L D + +A F GV RRF+ G
Sbjct: 295 DIRVAIPGAHMTLNGVAAITGGALLGADLEKVIAGVA-------DFDGVRRRFEYHGEAG 347
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNK---ALIAVFQPHTYSRLVVLKDDFANALSEA 487
G +YDD+AHHPTEV AVL AA++ +IAVFQPH YSR + +FA ALS A
Sbjct: 348 GVRVYDDYAHHPTEVTAVLTAAKELVEATDAGRIIAVFQPHLYSRTMNFASEFARALSLA 407
Query: 488 DQVVV 492
D+VV+
Sbjct: 408 DEVVL 412
>sp|B4U813|MURC_HYDS0 UDP-N-acetylmuramate--L-alanine ligase OS=Hydrogenobaculum sp.
(strain Y04AAS1) GN=murC PE=3 SV=1
Length = 449
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 159/467 (34%), Positives = 243/467 (52%), Gaps = 59/467 (12%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
F+ + HF+GIGG G+S +AK+ L G+EVSGSD+ + ++ L E GA ++IGH
Sbjct: 2 FREKFRKFHFIGIGGIGMSGIAKILLDMGYEVSGSDVRQNDVIKELKEKGATIYIGHDAK 61
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N+ G + VV SSAI N E+L AK +G+ + R LA L IA+SGSH
Sbjct: 62 NVIGKE------VVVYSSAISNVNEELLKAKELGLQVISRGDMLADLFRMKEGIAISGSH 115
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT SM++++ G D T ++G + F ++ G + + EADE DG FL L+
Sbjct: 116 GKTTTTSMISHISHIAGLDPTVLIGGILQTFGSNAVL-GKSELLISEADESDGSFLKLNS 174
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
+ VVTN+D EH+ ++D + +K F +F+ + G V+ D RS+L +I +
Sbjct: 175 VINVVTNIDKEHIGYYKDYEDIKEAFVKFINNVPFYGASVVNIDDTGVRSILSKIHK--- 231
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
KIITYG S D+ A+++ N + + + +G L
Sbjct: 232 ----------------------KIITYGIES-GDFQAKNIVFN-SDNTRFDVFYKGIKLN 267
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
I LQIPG+HNV N+LA IA V TL+ ++ ++ L F RR + +G
Sbjct: 268 TIELQIPGIHNVYNALASIA-VSTLMEIEQ------PVIRDALKSFKNAKRRIEFVGEKN 320
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
IYDD+ HHPTE+++V +A + ++ +K ++ VFQPH YSR L DDF + D+
Sbjct: 321 TNLIYDDYGHHPTEIKSVYEALKSKYKDKNIVVVFQPHRYSRTYYLIDDFVDLFKSLDK- 379
Query: 491 VVSAVLVFWLII--------FAVSSFWLIMAINSVICIVRSMLPEKQ 529
VF L I F +SS +I ++ C+ +P K+
Sbjct: 380 ------VFLLDIYGASEENTFGISSLDMINKVSKEECV---YIPSKE 417
>sp|C0Q8P4|MURC_DESAH UDP-N-acetylmuramate--L-alanine ligase OS=Desulfobacterium
autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2)
GN=murC PE=3 SV=1
Length = 456
Score = 230 bits (586), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 147/431 (34%), Positives = 223/431 (51%), Gaps = 49/431 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
I+FVGIGG G+SA+A+L L G+ VSGSDL S+ + L GA + GH ++ D
Sbjct: 8 IYFVGIGGIGMSAIAELLLSLGYRVSGSDLKLSAITQRLASCGATIFNGHRADQVKDVD- 66
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V S+AI ++N E++ A + R LA+L IAVSG+HGK++T +
Sbjct: 67 -----VLVTSTAISKNNPEVIEAAERSIRTIPRAEMLAELMRIKYAIAVSGAHGKTSTTA 121
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
M+A +L G D T +VG + + +G G V EADE DG FL +P++A VTN
Sbjct: 122 MIATILNQAGLDPTVVVGGLLKSIGTNA-HHGKGDYIVAEADESDGSFLKYAPAIAAVTN 180
Query: 258 LDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGV 317
+D EH+D ++D + +K F +F+ + G V+C D++ +++L +I +Y+
Sbjct: 181 IDLEHLDFYKDIEDIKDNFVKFINSVPFYGLAVLCLDNEHIQAILPRITA----RYT--- 233
Query: 318 VSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRP-LAQISLQI 376
T+G S+ D A + +G Y G+ L I+L +
Sbjct: 234 ------------------TFGLSAQADLAARGI--RFEGRRGYFTVVHGKEVLGDITLNL 273
Query: 377 PGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436
G HN+ N+LA IA L L D + +K L + GV RR ++ G + D
Sbjct: 274 SGKHNISNALAAIAVALELKVD-------FSVIKEALEQIEGVKRRLEIKGERNSITVVD 326
Query: 437 DFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAVL 496
D+ HHPTEV+ L A R+ +P+K ++ VFQPH YSR L D+F A ++D L
Sbjct: 327 DYGHHPTEVKTTLAAVREGWPDKRVVVVFQPHRYSRTKALFDEFTRAFYQSD-------L 379
Query: 497 VFWLIIFAVSS 507
+F L I+A S
Sbjct: 380 LFVLPIYAASE 390
>sp|C6BYG5|MURC_DESAD UDP-N-acetylmuramate--L-alanine ligase OS=Desulfovibrio salexigens
(strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763)
GN=murC PE=3 SV=1
Length = 470
Score = 230 bits (586), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 147/425 (34%), Positives = 223/425 (52%), Gaps = 41/425 (9%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
++R G IH +GIGGSG+S +A++ + GF V+GSDL + ++ LL+ GA + IGH
Sbjct: 1 MRSRVGNIHMIGIGGSGMSGIAEVLINMGFTVTGSDLAAGAPVKRLLKMGAQVFIGHGAD 60
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
N+ D VV S+AI DN E++ A+ +G+PI R LA+L IAV+G+H
Sbjct: 61 NVNDAD------VVVKSTAISDDNPELVKARELGIPIIPRAEMLAELMRLRTGIAVAGTH 114
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S+LA + D T I+G + F + G G+ + EADE DG FL L+P
Sbjct: 115 GKTTTTSLLATIFTEAELDPTVIIGGRLNTFGSNARL-GDGQFLIAEADESDGSFLCLAP 173
Query: 251 SVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310
+ VVTN+D +H+D + ++A+ FR+F+ I G V+CGD + LL IK+
Sbjct: 174 IITVVTNVDKDHLDFYGGQEAIDESFRKFMNSIPFYGMNVVCGDDPGVQRLLPSIKR--- 230
Query: 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA 370
+TYG + N E + V+ L E+ L
Sbjct: 231 ----------------------PCMTYGLNKGNRLRGEILSCEVRSLFKVYLDEK--LLG 266
Query: 371 QISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY 430
++SL PG HNVLN+L I L D + + LS FMGV RRF+ G
Sbjct: 267 EVSLAQPGKHNVLNALGAIGVSLEAGLDPK-------VILSGLSNFMGVGRRFEKKGESK 319
Query: 431 GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQV 490
G + DD+ HHP E++A ++ A+ FP + L+ FQPH ++R L +F +AD++
Sbjct: 320 GILVVDDYGHHPAEIQATIETAKSCFPQRRLVVAFQPHRFTRTEALFGEFCKTFEKADEL 379
Query: 491 VVSAV 495
+++ +
Sbjct: 380 LLTEI 384
>sp|Q01Q49|MURC_SOLUE UDP-N-acetylmuramate--L-alanine ligase OS=Solibacter usitatus
(strain Ellin6076) GN=murC PE=3 SV=1
Length = 472
Score = 229 bits (585), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 152/420 (36%), Positives = 219/420 (52%), Gaps = 42/420 (10%)
Query: 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQ 133
R +HF GIGG G+S +A++ L G+++SGSD+ S E L GA + GH+ SNI
Sbjct: 15 RPQHLHFTGIGGIGMSGIAEVLLNLGYQISGSDVKLSPITERLAAMGARVFEGHAASNIA 74
Query: 134 GNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKS 193
G A+V SSA+ + N E+ A+ + +P+ R LA+L IAV+GSHGK+
Sbjct: 75 G------ARALVVSSAVDEQNPEVQEARRISIPVIPRGELLAELMRLKYGIAVAGSHGKT 128
Query: 194 TTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVA 253
TT SM A +L G D T +VG V + G V+E+DE DG FL L+P +A
Sbjct: 129 TTTSMAATILNYAGLDPTVVVGGRVGTMGGSNARVGHSDFLVVESDESDGSFLKLAPIIA 188
Query: 254 VVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 313
VVTN+D EH+D + D DA+++ F F+ ++ G +++C D + LL +I++ T
Sbjct: 189 VVTNVDREHLDHYPDLDAIRAAFLEFVNKVPFYGAVIVCLDDANVQGLLPEIRRRT---- 244
Query: 314 SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESV-CPNVQGGSDYILCERGRPLAQI 372
ITYG ++ D A + C S++ L R L +
Sbjct: 245 ---------------------ITYGTTAQADMEAGDISCGPF--ASEFRLRYRTADLGRF 281
Query: 373 SLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGC 432
L IPG HNVLN++A IA + L ++ L F GV RRF L G G
Sbjct: 282 RLHIPGRHNVLNAMAAIAVAMEL-------EVKPDTIREALETFSGVDRRFQLRGQERGI 334
Query: 433 HIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV 492
+ DD+ HHPTE+RA L ARQ + + +FQPH Y+R L D+FA + +AD + V
Sbjct: 335 AVVDDYGHHPTEIRATLDGARQ-CGFRRIHVLFQPHRYTRTFHLMDEFARSFHQADSLFV 393
>sp|Q31I43|MURC_THICR UDP-N-acetylmuramate--L-alanine ligase OS=Thiomicrospira crunogena
(strain XCL-2) GN=murC PE=3 SV=1
Length = 461
Score = 229 bits (584), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 151/428 (35%), Positives = 224/428 (52%), Gaps = 47/428 (10%)
Query: 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS 130
K++ IHFVGIGG G++ +A++ L GF VSGSDL + + L+ GA + H S
Sbjct: 1 MKDQVKQIHFVGIGGVGMAGIAEVCLNLGFTVSGSDLKENPTVRHLISLGALIQFNHDAS 60
Query: 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190
+++ +D VV S+AI +DN E+ AK +P+ R LA+L IA++G+H
Sbjct: 61 HVKNSD------VVVVSTAIAKDNPEVCFAKESRIPVIPRAAMLAELMRMRFGIAIAGTH 114
Query: 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSP 250
GK+TT S+ + +L G D T ++G + QF D + G + + EADE D FL LSP
Sbjct: 115 GKTTTTSLASAILTEGGLDPTFVIGGKLNQF-DSNARLGSSQYLIAEADESDASFLHLSP 173
Query: 251 SVAVVTNLDWEHVDIFEDEDA-VKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 309
++VVTN+D +H++ ++ + A ++ F F+ ++ G ++C D Q +++L ++ +
Sbjct: 174 MMSVVTNIDEDHMETYQGDYANLEQTFIEFIHRLPFYGVAIVCIDDQNIQNMLPKLSR-- 231
Query: 310 GLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGR-P 368
KI TYGFS D A V QG S + + P
Sbjct: 232 -----------------------KIRTYGFSESADIRATEVLH--QGLSMHFNVKANDLP 266
Query: 369 LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGT 428
+ L PG HNVLN+LA I L L SI ++ L+ F GV RRF++ +
Sbjct: 267 EFSVVLNQPGKHNVLNALAAITVALEL-------DVSIESIQKALAGFGGVGRRFEVYPS 319
Query: 429 IYGCH----IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANAL 484
H + DD+ HHPTE+ A L AR FP K L+ VFQPH YSR L D+F AL
Sbjct: 320 RSIGHKNVTLVDDYGHHPTELEATLSTARMAFPEKRLVLVFQPHRYSRTRDLFDEFVQAL 379
Query: 485 SEADQVVV 492
AD +V+
Sbjct: 380 QHADLLVL 387
>sp|Q88N75|MURC_PSEPK UDP-N-acetylmuramate--L-alanine ligase OS=Pseudomonas putida
(strain KT2440) GN=murC PE=3 SV=1
Length = 482
Score = 228 bits (581), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 155/424 (36%), Positives = 220/424 (51%), Gaps = 47/424 (11%)
Query: 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDG 137
IHFVGIGG G+ +A++ L G+EVSGSDL S E L GA + +GH N D
Sbjct: 19 IHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKASPVTERLESFGAEIFVGHRAENAATAD- 77
Query: 138 SRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTAS 197
+V SSAI N E+ A +P+ R LA+L + +AV+G+HGK+TT S
Sbjct: 78 -----VLVVSSAINPANPEVATALERRIPVVPRAEMLAELMRYRHGVAVAGTHGKTTTTS 132
Query: 198 MLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTN 257
+LA V A G D T ++G + + G + + EADE D FL L P VAVVTN
Sbjct: 133 LLASVFAAGGLDPTFVIGGRLTAAGTNAQL-GTSRYLIAEADESDASFLHLQPMVAVVTN 191
Query: 258 LDWEHVDIFE-DEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGG 316
+D +H+ +E D + +K F FL + G V+C D R +L Q+K+ T
Sbjct: 192 IDADHMATYEGDFNKLKKTFVEFLHNLPFYGLAVMCLDDPVVREILPQVKRPT------- 244
Query: 317 VVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQG-GSDYILCERGRPLAQISLQ 375
+TYGFS D A +V QG + + + R R ++S+
Sbjct: 245 ------------------VTYGFSEEADIRAINV--RQQGMQTHFTVLRRDREPLEVSVN 284
Query: 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----G 431
+PG HNVLN+LA IA + D+ + E+I LS F GV RRF + G +
Sbjct: 285 MPGNHNVLNALATIA----IATDEGITDEAIVQ---GLSGFQGVGRRFQVYGELPVEGGS 337
Query: 432 CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVV 491
+ DD+ HHPTEV AV++A R +P++ L+ V+QPH YSR L DDF L +A+ ++
Sbjct: 338 VMLVDDYGHHPTEVAAVIKAVRGGWPSRRLVIVYQPHRYSRTRDLYDDFVQVLGDANVLL 397
Query: 492 VSAV 495
+ V
Sbjct: 398 LMEV 401
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 197,328,544
Number of Sequences: 539616
Number of extensions: 8365975
Number of successful extensions: 26967
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 377
Number of HSP's that attempted gapping in prelim test: 22368
Number of HSP's gapped (non-prelim): 1625
length of query: 538
length of database: 191,569,459
effective HSP length: 122
effective length of query: 416
effective length of database: 125,736,307
effective search space: 52306303712
effective search space used: 52306303712
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)