BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009294
(538 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255562314|ref|XP_002522164.1| DNA gyrase subunit B, putative [Ricinus communis]
gi|223538602|gb|EEF40205.1| DNA gyrase subunit B, putative [Ricinus communis]
Length = 732
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/518 (80%), Positives = 466/518 (89%), Gaps = 3/518 (0%)
Query: 17 MASRCFCSFSSSLF-FKPRTNFAIRGVSSQVLTRSNVVLPRAFLSSSIATEAFKENPVSK 75
+ + F S S L FKPR +F R V+S+V T N RAF+SSS ATE F+E+ SK
Sbjct: 31 LHCQSFSSLSRPLVSFKPRVSFQWRAVTSRV-TVQNAGSARAFMSSSTATEPFQESASSK 89
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
YGS+QIQVL+GLE VRKRP MYIGSTGPRGLHHLVYEILDNA+DEAQAGYAS ++V L
Sbjct: 90 AYGSDQIQVLKGLEPVRKRPGMYIGSTGPRGLHHLVYEILDNAIDEAQAGYASRVDVILH 149
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
+DNSVS++DNGRGIP DLHP T KSALETVLTVLHAGGKFGGS+SGYSVSGGLHGVGLSV
Sbjct: 150 SDNSVSISDNGRGIPTDLHPVTKKSALETVLTVLHAGGKFGGSNSGYSVSGGLHGVGLSV 209
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALSE LEVTVWRDGMEY Q+YSRG PVT L CH L V+S+DRQGT +RFWPDK+VFTT
Sbjct: 210 VNALSEGLEVTVWRDGMEYRQRYSRGNPVTILMCHSLAVESRDRQGTCVRFWPDKEVFTT 269
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
AI+FD+NTIAGR+RELAFLNPKLTI L+KED+DPEKNQY+EYF+AGGL EYV+WLNTDKK
Sbjct: 270 AIEFDYNTIAGRVRELAFLNPKLTITLKKEDNDPEKNQYDEYFYAGGLIEYVKWLNTDKK 329
Query: 316 PLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
PLHDVVGF K++DGITID+ALQWCSDAYSDT+LGYANSIRTIDGGTHI+G KASLTRTLN
Sbjct: 330 PLHDVVGFGKEIDGITIDMALQWCSDAYSDTILGYANSIRTIDGGTHIDGFKASLTRTLN 389
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
SLGKKSK +K+KDI+LSGEHVREGLTCI+SV+VP+PEFEGQTKTRLGNPEVRKVVDQSVQ
Sbjct: 390 SLGKKSKIIKEKDINLSGEHVREGLTCIVSVKVPSPEFEGQTKTRLGNPEVRKVVDQSVQ 449
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
EYLTEYLELHPDVLDSILSKSL+ALKAALAAK+AR+LVRQKSVLR+SSLPGKLADCSST
Sbjct: 450 EYLTEYLELHPDVLDSILSKSLNALKAALAAKKARELVRQKSVLRTSSLPGKLADCSSTN 509
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
PEESEIFIVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 510 PEESEIFIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 546
>gi|297739950|emb|CBI30132.3| unnamed protein product [Vitis vinifera]
Length = 707
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/523 (80%), Positives = 466/523 (89%), Gaps = 8/523 (1%)
Query: 17 MASRCFCS------FSSSLFFKPRTNFAIRGVSSQVLTRSNVVLPRAFLSSSIATEAFKE 70
MASR + SS LFFKPR F +R VS+ L R N PRAF+SSSIAT+AF+E
Sbjct: 1 MASRFYAHSSMHSLTSSVLFFKPRVGFQLRRVSNHFLIR-NAASPRAFMSSSIATDAFQE 59
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
+ SK YGSEQIQVLEGL+ VRKRP MYIGSTG RGLHHLVYEILDNA+DEAQAG+AS +
Sbjct: 60 STSSKAYGSEQIQVLEGLDPVRKRPGMYIGSTGLRGLHHLVYEILDNAIDEAQAGFASKV 119
Query: 131 EVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 190
+V LLAD+SVS+ DNGRGIP +LHP T KS+LETVLTVLHAGGKFGG+SSGYSVSGGLHG
Sbjct: 120 DVVLLADDSVSITDNGRGIPTELHPVTKKSSLETVLTVLHAGGKFGGASSGYSVSGGLHG 179
Query: 191 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 250
VGLSVVNALSE+LEVTVWRDGMEY QKYSRGKPVT+LT VLP +S D QGT IRFWPDK
Sbjct: 180 VGLSVVNALSEALEVTVWRDGMEYQQKYSRGKPVTSLTHRVLPTESTDLQGTHIRFWPDK 239
Query: 251 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWL 310
+VFTT IQFD+NTIAGRIRELAFLNP+L I LRKED DPEKNQYNEY +AGGL EYV+WL
Sbjct: 240 EVFTTEIQFDYNTIAGRIRELAFLNPELAITLRKEDKDPEKNQYNEYCYAGGLVEYVRWL 299
Query: 311 NTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 370
NTDKKP+HDVVGFRK DGI+ID+ALQWCSDAYSDTMLGYANSIRTIDGGTHI+G+KASL
Sbjct: 300 NTDKKPVHDVVGFRKVADGISIDVALQWCSDAYSDTMLGYANSIRTIDGGTHIDGMKASL 359
Query: 371 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
TRTLN+LGKKSK +K+KDI+LSGEHVREGLTC+ISV+VPNPEFEGQTKTRLGNPEVRKVV
Sbjct: 360 TRTLNNLGKKSKIIKEKDITLSGEHVREGLTCVISVKVPNPEFEGQTKTRLGNPEVRKVV 419
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
DQ+VQE+LTEYLELHPDVLD ILSKSL+ALKAALAAKRAR+LVRQKSVL+SSSLPGKLAD
Sbjct: 420 DQTVQEFLTEYLELHPDVLDLILSKSLNALKAALAAKRARELVRQKSVLKSSSLPGKLAD 479
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
CSST PEESEIFIVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 480 CSSTNPEESEIFIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 521
>gi|225441215|ref|XP_002266668.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
[Vitis vinifera]
Length = 719
Score = 831 bits (2147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/538 (78%), Positives = 469/538 (87%), Gaps = 15/538 (2%)
Query: 4 LLLKAPYLHIRVLMASRCFCSFSSSLFFKP--------RTNFAIRGVSSQVLTRSNVVLP 55
L L+ YL +R +MASR F S + R F +R VS+ L R N P
Sbjct: 3 LRLRPSYLPLR-MMASR----FESVIHVSDDCSCSSSFRVGFQLRRVSNHFLIR-NAASP 56
Query: 56 RAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEIL 115
RAF+SSSIAT+AF+E+ SK YGSEQIQVLEGL+ VRKRP MYIGSTG RGLHHLVYEIL
Sbjct: 57 RAFMSSSIATDAFQESTSSKAYGSEQIQVLEGLDPVRKRPGMYIGSTGLRGLHHLVYEIL 116
Query: 116 DNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKF 175
DNA+DEAQAG+AS ++V LLAD+SVS+ DNGRGIP +LHP T KS+LETVLTVLHAGGKF
Sbjct: 117 DNAIDEAQAGFASKVDVVLLADDSVSITDNGRGIPTELHPVTKKSSLETVLTVLHAGGKF 176
Query: 176 GGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVD 235
GG+SSGYSVSGGLHGVGLSVVNALSE+LEVTVWRDGMEY QKYSRGKPVT+LT VLP +
Sbjct: 177 GGASSGYSVSGGLHGVGLSVVNALSEALEVTVWRDGMEYQQKYSRGKPVTSLTHRVLPTE 236
Query: 236 SKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYN 295
S D QGT IRFWPDK+VFTT IQFD+NTIAGRIRELAFLNP+L I LRKED DPEKNQYN
Sbjct: 237 STDLQGTHIRFWPDKEVFTTEIQFDYNTIAGRIRELAFLNPELAITLRKEDKDPEKNQYN 296
Query: 296 EYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIR 355
EY +AGGL EYV+WLNTDKKP+HDVVGFRK DGI+ID+ALQWCSDAYSDTMLGYANSIR
Sbjct: 297 EYCYAGGLVEYVRWLNTDKKPVHDVVGFRKVADGISIDVALQWCSDAYSDTMLGYANSIR 356
Query: 356 TIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEG 415
TIDGGTHI+G+KASLTRTLN+LGKKSK +K+KDI+LSGEHVREGLTC+ISV+VPNPEFEG
Sbjct: 357 TIDGGTHIDGMKASLTRTLNNLGKKSKIIKEKDITLSGEHVREGLTCVISVKVPNPEFEG 416
Query: 416 QTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQ 475
QTKTRLGNPEVRKVVDQ+VQE+LTEYLELHPDVLD ILSKSL+ALKAALAAKRAR+LVRQ
Sbjct: 417 QTKTRLGNPEVRKVVDQTVQEFLTEYLELHPDVLDLILSKSLNALKAALAAKRARELVRQ 476
Query: 476 KSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
KSVL+SSSLPGKLADCSST PEESEIFIVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 477 KSVLKSSSLPGKLADCSSTNPEESEIFIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 533
>gi|356504692|ref|XP_003521129.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
[Glycine max]
Length = 726
Score = 828 bits (2140), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/542 (76%), Positives = 466/542 (85%), Gaps = 11/542 (2%)
Query: 1 MARLLLKAPYLHIRVLMASRC---------FCSFSSSLFFKPRTNFAIRGVSSQVLTRSN 51
MA +LL+ P L +RV+MASR SF SS K RT+F +R + + N
Sbjct: 1 MAHVLLRRPPL-LRVIMASRFITSSSFHMRLSSFPSSTLSKTRTSFPLRKFLAPCCSVPN 59
Query: 52 VVLPRAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLV 111
PRAF+SS ATEAF ++ S Y S+QIQVLEGL+ VRKRP MYIGSTGPRGLHHLV
Sbjct: 60 AFTPRAFMSSISATEAFLKSESSTAYSSDQIQVLEGLDPVRKRPGMYIGSTGPRGLHHLV 119
Query: 112 YEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHA 171
YEILDN+VDEAQAG+AS I V L AD+SVS+ DNGRGIP DLHP TNKSALETVLTVLHA
Sbjct: 120 YEILDNSVDEAQAGFASKIYVVLHADDSVSITDNGRGIPTDLHPVTNKSALETVLTVLHA 179
Query: 172 GGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHV 231
GGKFGG++SGYSVSGGLHGVGLSVVNALSESLE+TVWRDGMEY Q YSRGKPV+ L C V
Sbjct: 180 GGKFGGANSGYSVSGGLHGVGLSVVNALSESLEITVWRDGMEYMQTYSRGKPVSILKCLV 239
Query: 232 LPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEK 291
LP + KD +GTR+RFWPDK+VFTTAIQFDHNTIAGRIRELAFLNPKLTI LRKED+DPEK
Sbjct: 240 LPDERKDLRGTRVRFWPDKEVFTTAIQFDHNTIAGRIRELAFLNPKLTITLRKEDNDPEK 299
Query: 292 NQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYA 351
QYNEYF+AGGL EYV+WLNTDKK LHDV+ FRK+ DGIT+D+A QWC DAYSDT+LGYA
Sbjct: 300 VQYNEYFYAGGLVEYVKWLNTDKKALHDVLSFRKETDGITVDIAFQWCEDAYSDTILGYA 359
Query: 352 NSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNP 411
NSIRTIDGGTHI+ +KAS+TRTLNSLGKKSK +K+KDI+LSGEHVREGLTC++SV+VPNP
Sbjct: 360 NSIRTIDGGTHIDAMKASITRTLNSLGKKSKVIKEKDITLSGEHVREGLTCVVSVKVPNP 419
Query: 412 EFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARD 471
EFEGQTKTRLGNPEVRKVVDQS+QEYLTEYLELHPDVLDS+LSK+L+A KAALAAKRAR+
Sbjct: 420 EFEGQTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVLSKALNAFKAALAAKRARE 479
Query: 472 LVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQES 531
LVRQKSVLRSSSLPGKLADCSST PEE EIFIVEGDSAGGSAKQGRDRRFQ I+ PL+
Sbjct: 480 LVRQKSVLRSSSLPGKLADCSSTDPEECEIFIVEGDSAGGSAKQGRDRRFQAIL-PLRGK 538
Query: 532 IF 533
I
Sbjct: 539 IL 540
>gi|75288399|sp|Q5YLB4.1|GYRB_NICBE RecName: Full=DNA gyrase subunit B, chloroplastic/mitochondrial;
Flags: Precursor
gi|38017095|gb|AAR07943.1| DNA gyrase B subunit [Nicotiana benthamiana]
Length = 731
Score = 815 bits (2104), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/545 (78%), Positives = 471/545 (86%), Gaps = 17/545 (3%)
Query: 4 LLLKAPYLHIRVLMASRCFC---------SFSS------SLFFKPRTNFAIRGVSSQVLT 48
LL P H MASR SFSS S+ PR +R +S +L
Sbjct: 3 LLKPFPLQHSLRCMASRFLLHSHYHTHTLSFSSISLSRPSIVLNPRVINKLRRLSDAILI 62
Query: 49 RSNVVLPRAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLH 108
R N+V RAF+SSS TEAF+EN SK YGSEQIQVLEGL+ VRKRP MYIGSTGPRGLH
Sbjct: 63 R-NMVSLRAFMSSSTTTEAFQENTKSKGYGSEQIQVLEGLDPVRKRPGMYIGSTGPRGLH 121
Query: 109 HLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTV 168
HLVYEILDNAVDEAQAG+A+ I+V L ADNSVS+ADNGRGIP +LHP T KS+LETVLTV
Sbjct: 122 HLVYEILDNAVDEAQAGFATKIDVVLHADNSVSIADNGRGIPTELHPVTKKSSLETVLTV 181
Query: 169 LHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLT 228
LHAGGKFGGSSSGY+VSGGLHGVGLSVVNALS++LEVT+WRDG EY QKYSRGKP+TTL
Sbjct: 182 LHAGGKFGGSSSGYNVSGGLHGVGLSVVNALSQALEVTIWRDGKEYQQKYSRGKPITTLI 241
Query: 229 CHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSD 288
CH LPV+ +DRQGT IRFWPDK+VFTT +QFD+NTIAGRIRELAFLNP+LTIAL+KED D
Sbjct: 242 CHDLPVEMRDRQGTAIRFWPDKEVFTTEMQFDYNTIAGRIRELAFLNPELTIALKKEDID 301
Query: 289 PEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTML 348
PEK Q NEYF+AGGL EYV+WLN DKKPLHDV+GFRK+ DGITID+ALQWCSDAYSDTML
Sbjct: 302 PEKIQCNEYFYAGGLVEYVKWLNADKKPLHDVLGFRKEADGITIDMALQWCSDAYSDTML 361
Query: 349 GYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRV 408
GYANSIRTIDGGTHI+GVKA+LTR LN+LGKKSKT+K+KDISLSGEHVREGLTC+ISV+V
Sbjct: 362 GYANSIRTIDGGTHIDGVKAALTRILNNLGKKSKTIKEKDISLSGEHVREGLTCVISVKV 421
Query: 409 PNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKR 468
PNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL+ALKAALAAKR
Sbjct: 422 PNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLNALKAALAAKR 481
Query: 469 ARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPL 528
AR+LVRQKSVL+SSSLPGKLADCS+T PEE+EIFIVEGDSAGGSAKQGRDRRFQ I+ PL
Sbjct: 482 ARELVRQKSVLKSSSLPGKLADCSATNPEEAEIFIVEGDSAGGSAKQGRDRRFQAIL-PL 540
Query: 529 QESIF 533
+ I
Sbjct: 541 RGKIL 545
>gi|356571931|ref|XP_003554124.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
[Glycine max]
Length = 724
Score = 808 bits (2088), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/512 (78%), Positives = 447/512 (87%), Gaps = 2/512 (0%)
Query: 22 FCSFSSSLFFKPRTNFAIRGVSSQVLTRSNVVLPRAFLSSSIATEAFKENPVSKTYGSEQ 81
SF SS K RT+F +R + + N V PRAF+SS TEAF + Y S+Q
Sbjct: 29 LSSFPSSTLSKTRTSFPLRKFWAPC-SVPNAVTPRAFMSSISTTEAFHNSESPTAYSSDQ 87
Query: 82 IQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVS 141
IQVLEGL+ VRKRP MYIGSTGPRGLHHLVYEILDNAVDEAQAG+AS I+V LLAD+SVS
Sbjct: 88 IQVLEGLDPVRKRPGMYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKIDVVLLADDSVS 147
Query: 142 VADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSE 201
+ DNGRGIP DLHP TNKSALETVLTVLHAGGKFGG++SGYSVSGGLHGVGLSVVNALSE
Sbjct: 148 ITDNGRGIPTDLHPVTNKSALETVLTVLHAGGKFGGANSGYSVSGGLHGVGLSVVNALSE 207
Query: 202 SLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDH 261
LE+TVWRDGMEY Q YSRGKPV+ L C VLP + KD +GTR+RFWPDK+VFTTAIQFDH
Sbjct: 208 LLEITVWRDGMEYMQTYSRGKPVSILKCLVLPDERKDLRGTRVRFWPDKEVFTTAIQFDH 267
Query: 262 NTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVV 321
NTIAGRIRELAFLNPKLTI RKED+DPEK QYNEYF+AGGL EYV+WLNTDKK LHDV+
Sbjct: 268 NTIAGRIRELAFLNPKLTITFRKEDNDPEKVQYNEYFYAGGLVEYVKWLNTDKKALHDVL 327
Query: 322 GFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKS 381
FRK+ DGIT+D+A QW DAYSDT+LGYANSIRTIDGGTHI+ +KAS+TRTLNSLGKKS
Sbjct: 328 SFRKETDGITVDIAFQWSEDAYSDTILGYANSIRTIDGGTHIDAMKASITRTLNSLGKKS 387
Query: 382 KTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEY 441
K +K+KDI+LSGEHVREGLTC++SV+VPNPEFEGQTKTRLGNPEVRKVVDQS+QEYLTEY
Sbjct: 388 KVIKEKDITLSGEHVREGLTCVVSVKVPNPEFEGQTKTRLGNPEVRKVVDQSIQEYLTEY 447
Query: 442 LELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEI 501
LELHPDVLDS+LSK+L+A KAALAAKRAR+LVRQKSVLRSSSLPGKLADCSST PEE EI
Sbjct: 448 LELHPDVLDSVLSKALNAFKAALAAKRARELVRQKSVLRSSSLPGKLADCSSTDPEECEI 507
Query: 502 FIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
FIVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 508 FIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 538
>gi|224139720|ref|XP_002323244.1| predicted protein [Populus trichocarpa]
gi|222867874|gb|EEF05005.1| predicted protein [Populus trichocarpa]
Length = 700
Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/506 (79%), Positives = 451/506 (89%), Gaps = 10/506 (1%)
Query: 28 SLFFKPRTNFAIRGVSSQVLTRSNVVLPRAFLSSSIATEAFKENPVSKTYGSEQIQVLEG 87
S+ F R +F R V S+ L + N V PRAF+S+S+ATE+ +E+ SK YGS+QIQVL+G
Sbjct: 19 SVSFNSRVSFPARRVPSRFLVQ-NGVSPRAFMSTSVATESQQESAGSKAYGSDQIQVLKG 77
Query: 88 LEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGR 147
LE VRKRP MYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS I V L +DNSVS+ DNGR
Sbjct: 78 LEPVRKRPGMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASTINVVLHSDNSVSITDNGR 137
Query: 148 GIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTV 207
GIP DLHP T KSALETVLTVLHAGGKFGGS+SGY VSGGLHGVGLSVVNALSE LEVTV
Sbjct: 138 GIPTDLHPETKKSALETVLTVLHAGGKFGGSNSGYRVSGGLHGVGLSVVNALSEELEVTV 197
Query: 208 WRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGR 267
WRDG +Y QKYSRG PVTTLTCH LPV+SK+R+GT I+FWPDK+VFTT IQFD++TIAGR
Sbjct: 198 WRDGKQYQQKYSRGNPVTTLTCHELPVESKERRGTHIKFWPDKEVFTTEIQFDYHTIAGR 257
Query: 268 IRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV 327
+RELAFLNPK D+DPEKNQ++E+F+AGGL EYV WLNTDKKPLHDV+GFRK+V
Sbjct: 258 VRELAFLNPK--------DNDPEKNQFDEHFYAGGLVEYVNWLNTDKKPLHDVLGFRKEV 309
Query: 328 DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDK 387
DGI ID+ALQWCSDAYSDT+LGYANSIRT+DGGTHI+G KASLTRTLN+LGKKSK +KDK
Sbjct: 310 DGIAIDMALQWCSDAYSDTILGYANSIRTVDGGTHIDGAKASLTRTLNNLGKKSKVIKDK 369
Query: 388 DISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPD 447
D+SLSGEHVREGLTCIISV+VP+PEFEGQTKTRLGNPEVRKVV+QS+QEYLTEYLELHPD
Sbjct: 370 DMSLSGEHVREGLTCIISVKVPSPEFEGQTKTRLGNPEVRKVVEQSIQEYLTEYLELHPD 429
Query: 448 VLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGD 507
LDSILSKSL+ALKAALAAKRAR+LVRQKSVL+SSSLPGKLADCSST PEESEIFIVEGD
Sbjct: 430 ALDSILSKSLNALKAALAAKRARELVRQKSVLKSSSLPGKLADCSSTDPEESEIFIVEGD 489
Query: 508 SAGGSAKQGRDRRFQVIINPLQESIF 533
SAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 490 SAGGSAKQGRDRRFQAIL-PLRGKIL 514
>gi|224086827|ref|XP_002307976.1| predicted protein [Populus trichocarpa]
gi|222853952|gb|EEE91499.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/468 (83%), Positives = 429/468 (91%), Gaps = 1/468 (0%)
Query: 66 EAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAG 125
E+ KE+ SK YGS+QIQVL+GLE VRKRP MYIGSTGPRGLHHLVYEILDNAVDEAQAG
Sbjct: 1 ESQKESASSKAYGSDQIQVLKGLEPVRKRPGMYIGSTGPRGLHHLVYEILDNAVDEAQAG 60
Query: 126 YASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVS 185
YAS I V L +DNS+S+ DNGRGIP DLH T KSALETVLTVLHAGGKFGGS+SGYSVS
Sbjct: 61 YASKINVVLHSDNSISITDNGRGIPTDLHQVTKKSALETVLTVLHAGGKFGGSNSGYSVS 120
Query: 186 GGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIR 245
GGLHGVGLSVVNALSE LEVTVWRDG EY QKYSRG PVTTL C+ L +SKD++GTRIR
Sbjct: 121 GGLHGVGLSVVNALSEELEVTVWRDGKEYQQKYSRGNPVTTLMCYELSAESKDQKGTRIR 180
Query: 246 FWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEE 305
FWPDK+VFTT IQFD+NT+ GR+RELAFLNPKL I+L+KED+DPEKNQY+E+F+AGGL E
Sbjct: 181 FWPDKEVFTTEIQFDYNTVGGRVRELAFLNPKLAISLKKEDNDPEKNQYDEHFYAGGLIE 240
Query: 306 YVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 365
YV WLNTDKK LHDVV FRK+VDGI ID+ALQWCSDAYSDT+LGYANSIRT+DGGTHI+G
Sbjct: 241 YVNWLNTDKKSLHDVVSFRKEVDGIAIDMALQWCSDAYSDTILGYANSIRTVDGGTHIDG 300
Query: 366 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 425
VKASLTRTLN+ GKKSK +KDKDISLSGEHVREGLTCIISV+VP+PEFEGQTKTRLGNPE
Sbjct: 301 VKASLTRTLNNFGKKSKVIKDKDISLSGEHVREGLTCIISVKVPSPEFEGQTKTRLGNPE 360
Query: 426 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 485
VRKVV+QSVQEYLTEYLELHPDVLDSILSKSL+ALKAALAAKRAR+LVRQKSVL+SSSLP
Sbjct: 361 VRKVVEQSVQEYLTEYLELHPDVLDSILSKSLNALKAALAAKRARELVRQKSVLKSSSLP 420
Query: 486 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
GKLADCSST PEESEIFIVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 421 GKLADCSSTDPEESEIFIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 467
>gi|297810505|ref|XP_002873136.1| hypothetical protein ARALYDRAFT_487191 [Arabidopsis lyrata subsp.
lyrata]
gi|297318973|gb|EFH49395.1| hypothetical protein ARALYDRAFT_487191 [Arabidopsis lyrata subsp.
lyrata]
Length = 729
Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/548 (75%), Positives = 463/548 (84%), Gaps = 25/548 (4%)
Query: 4 LLLKAPYLHIRVLMASR--CFCSFSSSLFFK----------------PRTNFAIRGVSSQ 45
LL +A YL +R LMASR F S S F + R F V +Q
Sbjct: 3 LLQRASYLRLR-LMASRPRLFSSSLSPAFHRHSSFLSSPPFSSPSPSFRLKFQFTNVLNQ 61
Query: 46 VLTRSNVVLPRAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPR 105
L + N V R FLS TEA +E SK Y SEQIQVLEGL+ VRKRP MYIGSTGPR
Sbjct: 62 RLIQRNAVSSR-FLS----TEASQETTTSKGYSSEQIQVLEGLDPVRKRPGMYIGSTGPR 116
Query: 106 GLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETV 165
GLHHLVYEILDNA+DEAQAG+AS ++V L AD SVSV DNGRGIP DLHPAT KS+LETV
Sbjct: 117 GLHHLVYEILDNAIDEAQAGFASKVDVVLHADGSVSVVDNGRGIPTDLHPATKKSSLETV 176
Query: 166 LTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 225
LTVLHAGGKFGG+SSGYSVSGGLHGVGLSVVNALSE+LEVTVWRDGME+ Q YSRGKP+T
Sbjct: 177 LTVLHAGGKFGGTSSGYSVSGGLHGVGLSVVNALSEALEVTVWRDGMEHKQNYSRGKPIT 236
Query: 226 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 285
TLTC VL ++S+ +GT IRFWPDK+VFTTAI+FDHNTIAGRIRELAFLNPK+TI+L+KE
Sbjct: 237 TLTCRVLTLESERTKGTSIRFWPDKEVFTTAIEFDHNTIAGRIRELAFLNPKVTISLKKE 296
Query: 286 DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSD 345
D DPEKNQY+EY+FAGGL EYV WLNTDK P+HDV+GFR++++G T+D+ALQWCSDAYSD
Sbjct: 297 DDDPEKNQYSEYYFAGGLTEYVSWLNTDKNPIHDVLGFRREINGATVDVALQWCSDAYSD 356
Query: 346 TMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIIS 405
TMLGYANSIRTIDGGTHIEGVKASLTRTLN+L KKSKTVK+KDISLSGEHVREGLTCI+S
Sbjct: 357 TMLGYANSIRTIDGGTHIEGVKASLTRTLNALAKKSKTVKEKDISLSGEHVREGLTCIVS 416
Query: 406 VRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALA 465
V++PNPEFEGQTKTRLGNPEVRK+VDQSVQEYLTE+LELHPDVL+SI+SKSL+A KAALA
Sbjct: 417 VKIPNPEFEGQTKTRLGNPEVRKIVDQSVQEYLTEFLELHPDVLESIVSKSLNAYKAALA 476
Query: 466 AKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVII 525
AKRAR+LVR KSVL+SSSLPGKLADCSST PE SEIFIVEGDSAGGSAKQGRDRRFQ I+
Sbjct: 477 AKRARELVRSKSVLKSSSLPGKLADCSSTDPEASEIFIVEGDSAGGSAKQGRDRRFQAIL 536
Query: 526 NPLQESIF 533
PL+ I
Sbjct: 537 -PLRGKIL 543
>gi|18414465|ref|NP_568133.1| DNA gyrase subunit B [Arabidopsis thaliana]
gi|75165162|sp|Q94BZ7.1|GYRBM_ARATH RecName: Full=DNA gyrase subunit B, mitochondrial; Flags: Precursor
gi|14517374|gb|AAK62578.1| AT3g10270/F14P13_13 [Arabidopsis thaliana]
gi|22655426|gb|AAM98305.1| At3g10270/F14P13_13 [Arabidopsis thaliana]
gi|332003319|gb|AED90702.1| DNA gyrase subunit B [Arabidopsis thaliana]
Length = 732
Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/500 (79%), Positives = 444/500 (88%), Gaps = 6/500 (1%)
Query: 34 RTNFAIRGVSSQVLTRSNVVLPRAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRK 93
R F + V SQ L + N + R FLS TEA +E SK Y SEQIQVLEGL+ VRK
Sbjct: 53 RLKFQLTSVLSQRLIQRNAISSR-FLS----TEASQETTTSKGYSSEQIQVLEGLDPVRK 107
Query: 94 RPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDL 153
RP MYIGSTG RGLHHLVYEILDNA+DEAQAGYAS ++V L AD SVSV DNGRGIP DL
Sbjct: 108 RPGMYIGSTGSRGLHHLVYEILDNAIDEAQAGYASKVDVVLHADGSVSVVDNGRGIPTDL 167
Query: 154 HPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGME 213
HPAT KS+LETVLTVLHAGGKFGG+SSGYSVSGGLHGVGLSVVNALSE+LEV+VWRDGME
Sbjct: 168 HPATKKSSLETVLTVLHAGGKFGGTSSGYSVSGGLHGVGLSVVNALSEALEVSVWRDGME 227
Query: 214 YHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAF 273
+ Q YSRGKP+TTLTC VLP++SK +GT IRFWPDK+VFTTAI+FDHNTIAGRIRELAF
Sbjct: 228 HKQNYSRGKPITTLTCRVLPLESKGTKGTSIRFWPDKEVFTTAIEFDHNTIAGRIRELAF 287
Query: 274 LNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITID 333
LNPK+TI+L+KED DPEK QY+EY FAGGL EYV WLNTDK P+HDV+GFR++++G T+D
Sbjct: 288 LNPKVTISLKKEDDDPEKTQYSEYSFAGGLTEYVSWLNTDKNPIHDVLGFRREINGATVD 347
Query: 334 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 393
+ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN+L KKSKTVK+KDISLSG
Sbjct: 348 VALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNTLAKKSKTVKEKDISLSG 407
Query: 394 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 453
EHVREGLTCI+SV+VPNPEFEGQTKTRLGNPEVRK+VDQSVQEYLTE+LELHPD+L+SI+
Sbjct: 408 EHVREGLTCIVSVKVPNPEFEGQTKTRLGNPEVRKIVDQSVQEYLTEFLELHPDILESII 467
Query: 454 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 513
SKSL+A KAALAAKRAR+LVR KSVL+SSSLPGKLADCSST PE SEIFIVEGDSAGGSA
Sbjct: 468 SKSLNAYKAALAAKRARELVRSKSVLKSSSLPGKLADCSSTDPEVSEIFIVEGDSAGGSA 527
Query: 514 KQGRDRRFQVIINPLQESIF 533
KQGRDRRFQ I+ PL+ I
Sbjct: 528 KQGRDRRFQAIL-PLRGKIL 546
>gi|378405244|sp|Q9SS38.3|GYRBP_ARATH RecName: Full=DNA gyrase subunit B, chloroplastic; Flags: Precursor
Length = 730
Score = 769 bits (1985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/501 (79%), Positives = 449/501 (89%), Gaps = 3/501 (0%)
Query: 33 PRTNFAIRGVSSQVLTRSNVVLPRAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVR 92
PR F + V SQ L + N V P++F+SS++ E+ +E+ SK Y SE IQVLEGL+ VR
Sbjct: 47 PRIKFQLANVFSQRLVQRNAVSPKSFMSSTM--ESLQESSTSKDYSSEHIQVLEGLDPVR 104
Query: 93 KRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPID 152
KRP MYIGSTG RGLHHLVYEILDNA+DEAQAG+AS I+V L +D+SVS++DNGRGIP D
Sbjct: 105 KRPGMYIGSTGSRGLHHLVYEILDNAIDEAQAGFASKIDVVLHSDDSVSISDNGRGIPTD 164
Query: 153 LHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGM 212
LHPAT KS+LETVLTVLHAGGKFGG SSGYSVSGGLHGVGLSVVNALSE+LEV V RDGM
Sbjct: 165 LHPATGKSSLETVLTVLHAGGKFGGKSSGYSVSGGLHGVGLSVVNALSEALEVIVRRDGM 224
Query: 213 EYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELA 272
E+ QKYSRGKPVTTLTCHVLP +S+ QGT IRFWPDK+VFTTAIQFDHNTIAGRIRELA
Sbjct: 225 EFQQKYSRGKPVTTLTCHVLPPESRGTQGTCIRFWPDKEVFTTAIQFDHNTIAGRIRELA 284
Query: 273 FLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITI 332
FLNPK+TI+L+KED DPE++ Y+EYF+AGGL EYV WLNTDKKPLHDV+GFRK+++G T+
Sbjct: 285 FLNPKVTISLKKEDDDPERDVYSEYFYAGGLTEYVSWLNTDKKPLHDVLGFRKEINGSTV 344
Query: 333 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 392
D++LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSL KK K +K+KDISLS
Sbjct: 345 DVSLQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLAKKLKVIKEKDISLS 404
Query: 393 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 452
GEHVREGLTCI+SV+VPNPEFEGQTKTRLGNPEVRK+VDQSVQEYLTEYLELHPDVL+SI
Sbjct: 405 GEHVREGLTCIVSVKVPNPEFEGQTKTRLGNPEVRKIVDQSVQEYLTEYLELHPDVLESI 464
Query: 453 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 512
+SKSL+A KAALAAKRAR+LVR KSVL+SSSLPGKLADCSST P ESEIFIVEGDSAGGS
Sbjct: 465 ISKSLNAYKAALAAKRARELVRSKSVLKSSSLPGKLADCSSTDPAESEIFIVEGDSAGGS 524
Query: 513 AKQGRDRRFQVIINPLQESIF 533
AKQGRDRRFQ I+ PL+ I
Sbjct: 525 AKQGRDRRFQAIL-PLRGKIL 544
>gi|9955568|emb|CAC05495.1| DNA gyrase subunit B-like protein [Arabidopsis thaliana]
Length = 760
Score = 767 bits (1981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/530 (75%), Positives = 444/530 (83%), Gaps = 36/530 (6%)
Query: 34 RTNFAIRGVSSQVLTRSNVVLPRAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRK 93
R F + V SQ L + N + R FLS TEA +E SK Y SEQIQVLEGL+ VRK
Sbjct: 51 RLKFQLTSVLSQRLIQRNAISSR-FLS----TEASQETTTSKGYSSEQIQVLEGLDPVRK 105
Query: 94 RPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDL 153
RP MYIGSTG RGLHHLVYEILDNA+DEAQAGYAS ++V L AD SVSV DNGRGIP DL
Sbjct: 106 RPGMYIGSTGSRGLHHLVYEILDNAIDEAQAGYASKVDVVLHADGSVSVVDNGRGIPTDL 165
Query: 154 HPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGME 213
HPAT KS+LETVLTVLHAGGKFGG+SSGYSVSGGLHGVGLSVVNALSE+LEV+VWRDGME
Sbjct: 166 HPATKKSSLETVLTVLHAGGKFGGTSSGYSVSGGLHGVGLSVVNALSEALEVSVWRDGME 225
Query: 214 YHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ---------------------- 251
+ Q YSRGKP+TTLTC VLP++SK +GT IRFWPDK+
Sbjct: 226 HKQNYSRGKPITTLTCRVLPLESKGTKGTSIRFWPDKEGFACFPLLTTLPKPKLDLMINF 285
Query: 252 --------VFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGL 303
VFTTAI+FDHNTIAGRIRELAFLNPK+TI+L+KED DPEK QY+EY FAGGL
Sbjct: 286 PLWNELFSVFTTAIEFDHNTIAGRIRELAFLNPKVTISLKKEDDDPEKTQYSEYSFAGGL 345
Query: 304 EEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
EYV WLNTDK P+HDV+GFR++++G T+D+ALQWCSDAYSDTMLGYANSIRTIDGGTHI
Sbjct: 346 TEYVSWLNTDKNPIHDVLGFRREINGATVDVALQWCSDAYSDTMLGYANSIRTIDGGTHI 405
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
EGVKASLTRTLN+L KKSKTVK+KDISLSGEHVREGLTCI+SV+VPNPEFEGQTKTRLGN
Sbjct: 406 EGVKASLTRTLNTLAKKSKTVKEKDISLSGEHVREGLTCIVSVKVPNPEFEGQTKTRLGN 465
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
PEVRK+VDQSVQEYLTE+LELHPD+L+SI+SKSL+A KAALAAKRAR+LVR KSVL+SSS
Sbjct: 466 PEVRKIVDQSVQEYLTEFLELHPDILESIISKSLNAYKAALAAKRARELVRSKSVLKSSS 525
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LPGKLADCSST PE SEIFIVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 526 LPGKLADCSSTDPEVSEIFIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 574
>gi|449453173|ref|XP_004144333.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
[Cucumis sativus]
Length = 719
Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/532 (76%), Positives = 452/532 (84%), Gaps = 19/532 (3%)
Query: 11 LHIRVLMASRCFCSFSSSLFFKPRTNF-AIRGVSSQVLTRSNVV--LP------RAFLSS 61
+H+R L SSS F PR +F +RG + + S + +P +AF+SS
Sbjct: 12 IHLRFL---------SSSASFAPRFSFLQLRGARFRTMKISTSIRLVPNAEVSSKAFMSS 62
Query: 62 SIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDE 121
S ATE + SK YGSEQIQVLEGL+ VRKRP MYIGSTGPRGLHHLVYEILDNAVDE
Sbjct: 63 SAATETSTRSESSKAYGSEQIQVLEGLDPVRKRPGMYIGSTGPRGLHHLVYEILDNAVDE 122
Query: 122 AQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSG 181
AQAG+AS I+V L ADNSVSVADNGRGIP DLHP T KS+LETVLTVLHAGGKFGGSSSG
Sbjct: 123 AQAGFASQIDVVLHADNSVSVADNGRGIPTDLHPVTKKSSLETVLTVLHAGGKFGGSSSG 182
Query: 182 YSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQG 241
YSVSGGLHGVGLSVVNALSESLEV++WRDG E+HQKYSRGKP + LT HV + K+ QG
Sbjct: 183 YSVSGGLHGVGLSVVNALSESLEVSIWRDGNEFHQKYSRGKPASILTSHVPSSELKNHQG 242
Query: 242 TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG 301
T IRFWPDK+VFTT IQFD+NTI+GRIRELAFLNPKLTI L KED+D EKNQYNEY +AG
Sbjct: 243 THIRFWPDKEVFTTGIQFDYNTISGRIRELAFLNPKLTITLTKEDNDLEKNQYNEYCYAG 302
Query: 302 GLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGT 361
GL EYV WLN+DK P+H+V GFRK+ DG+ ID+ALQWC+DAYSDT+LGYANSIRTIDGGT
Sbjct: 303 GLVEYVAWLNSDKNPIHEVFGFRKETDGVAIDVALQWCADAYSDTILGYANSIRTIDGGT 362
Query: 362 HIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 421
HI+G+KASLTRTLN+LGKKSK KDKDISLSGEHVREGLTC++SVRV NPEFEGQTKTRL
Sbjct: 363 HIDGMKASLTRTLNNLGKKSKIFKDKDISLSGEHVREGLTCVVSVRVRNPEFEGQTKTRL 422
Query: 422 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 481
GNPEVRKVV+QS+QEYLTEYLELHPDVL+ ILSKSL+ALKAALAAKRAR+LVRQKSVLRS
Sbjct: 423 GNPEVRKVVEQSIQEYLTEYLELHPDVLELILSKSLNALKAALAAKRARELVRQKSVLRS 482
Query: 482 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
SSLPGKLADCSS PEESEIFIVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 483 SSLPGKLADCSSIKPEESEIFIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 533
>gi|334185208|ref|NP_187638.5| DNA gyrase subunit B [Arabidopsis thaliana]
gi|332641361|gb|AEE74882.1| DNA gyrase subunit B [Arabidopsis thaliana]
Length = 772
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/533 (74%), Positives = 449/533 (84%), Gaps = 35/533 (6%)
Query: 33 PRTNFAIRGVSSQVLTRSNVVLPRAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVR 92
PR F + V SQ L + N V P++F+SS++ E+ +E+ SK Y SE IQVLEGL+ VR
Sbjct: 57 PRIKFQLANVFSQRLVQRNAVSPKSFMSSTM--ESLQESSTSKDYSSEHIQVLEGLDPVR 114
Query: 93 KRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPID 152
KRP MYIGSTG RGLHHLVYEILDNA+DEAQAG+AS I+V L +D+SVS++DNGRGIP D
Sbjct: 115 KRPGMYIGSTGSRGLHHLVYEILDNAIDEAQAGFASKIDVVLHSDDSVSISDNGRGIPTD 174
Query: 153 LHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGM 212
LHPAT KS+LETVLTVLHAGGKFGG SSGYSVSGGLHGVGLSVVNALSE+LEV V RDGM
Sbjct: 175 LHPATGKSSLETVLTVLHAGGKFGGKSSGYSVSGGLHGVGLSVVNALSEALEVIVRRDGM 234
Query: 213 EYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELA 272
E+ QKYSRGKPVTTLTCHVLP +S+ QGT IRFWPDK+VFTTAIQFDHNTIAGRIRELA
Sbjct: 235 EFQQKYSRGKPVTTLTCHVLPPESRGTQGTCIRFWPDKEVFTTAIQFDHNTIAGRIRELA 294
Query: 273 FLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITI 332
FLNPK+TI+L+KED DPE++ Y+EYF+AGGL EYV WLNTDKKPLHDV+GFRK+++G T+
Sbjct: 295 FLNPKVTISLKKEDDDPERDVYSEYFYAGGLTEYVSWLNTDKKPLHDVLGFRKEINGSTV 354
Query: 333 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVK------- 385
D++LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSL KK K +K
Sbjct: 355 DVSLQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLAKKLKVIKVKGYIIY 414
Query: 386 -------------------------DKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTR 420
+KDISLSGEHVREGLTCI+SV+VPNPEFEGQTKTR
Sbjct: 415 SSPWIETKFKYSSALKRHALRTINNEKDISLSGEHVREGLTCIVSVKVPNPEFEGQTKTR 474
Query: 421 LGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLR 480
LGNPEVRK+VDQSVQEYLTEYLELHPDVL+SI+SKSL+A KAALAAKRAR+LVR KSVL+
Sbjct: 475 LGNPEVRKIVDQSVQEYLTEYLELHPDVLESIISKSLNAYKAALAAKRARELVRSKSVLK 534
Query: 481 SSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
SSSLPGKLADCSST P ESEIFIVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 535 SSSLPGKLADCSSTDPAESEIFIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 586
>gi|449488224|ref|XP_004157973.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
[Cucumis sativus]
Length = 719
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/529 (76%), Positives = 450/529 (85%), Gaps = 13/529 (2%)
Query: 11 LHIRVLMASRC------FCSFSSSLFFKPRTNFAIRGVSSQVLTRSNVVLPRAFLSSSIA 64
+H+R L +S F S + F + + +IR L + V +AF+SSS A
Sbjct: 12 IHLRFLSSSASVAPRFSFLQLSGARFRTMKISTSIR------LVPNAEVSSKAFMSSSAA 65
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
TE + SK YGSEQIQVLEGL+ VRKRP MYIGSTGPRGLHHLVYEILDNAVDEAQA
Sbjct: 66 TETSTGSESSKAYGSEQIQVLEGLDPVRKRPGMYIGSTGPRGLHHLVYEILDNAVDEAQA 125
Query: 125 GYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 184
G+AS I+V L ADNSVSVADNGRGIP DLHP T KS+LETVLTVLHAGGKFGGSSSGYSV
Sbjct: 126 GFASQIDVVLHADNSVSVADNGRGIPTDLHPVTKKSSLETVLTVLHAGGKFGGSSSGYSV 185
Query: 185 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 244
SGGLHGVGLSVVNALSESLEV++WRDG E+HQKYSRGKP + LT HV + K+ QGT I
Sbjct: 186 SGGLHGVGLSVVNALSESLEVSIWRDGNEFHQKYSRGKPTSILTSHVPSSELKNHQGTHI 245
Query: 245 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 304
RFWPDK+VFTT IQFD+NTI+GRIRELAFLNPKLTIAL KED+D EKNQYNEY +AGGL
Sbjct: 246 RFWPDKEVFTTGIQFDYNTISGRIRELAFLNPKLTIALTKEDNDLEKNQYNEYCYAGGLV 305
Query: 305 EYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 364
EYV WLN+DK P+H+V GFRK+ DG+ ID+ALQWC+DAYSDT+LGYANSIRTIDGGTHI+
Sbjct: 306 EYVAWLNSDKNPIHEVFGFRKETDGVAIDVALQWCADAYSDTILGYANSIRTIDGGTHID 365
Query: 365 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 424
G+KASLTRTLN+LGKKSK KDKDISLSGEHVREGLTC++SVRV NPEFEGQTKTRLGNP
Sbjct: 366 GMKASLTRTLNNLGKKSKIFKDKDISLSGEHVREGLTCVVSVRVRNPEFEGQTKTRLGNP 425
Query: 425 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 484
EVRKVV+QS+QEYLTEYLELHPDVL+ ILSKSL+ALKAALAAKRAR+LVRQKSVLRSSSL
Sbjct: 426 EVRKVVEQSIQEYLTEYLELHPDVLELILSKSLNALKAALAAKRARELVRQKSVLRSSSL 485
Query: 485 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
PGKLADCSS PEESEIFIVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 486 PGKLADCSSIKPEESEIFIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 533
>gi|297833810|ref|XP_002884787.1| hypothetical protein ARALYDRAFT_478355 [Arabidopsis lyrata subsp.
lyrata]
gi|297330627|gb|EFH61046.1| hypothetical protein ARALYDRAFT_478355 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/471 (81%), Positives = 429/471 (91%), Gaps = 4/471 (0%)
Query: 66 EAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAG 125
E+ +E+ SK Y SE IQVLEGL+ VRKRP MYIGSTG RGLHHLVYEILDNA+DEAQAG
Sbjct: 2 ESLQESSTSKDYSSEHIQVLEGLDPVRKRPGMYIGSTGSRGLHHLVYEILDNAIDEAQAG 61
Query: 126 YASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVS 185
+AS I+V L +D+SVS++DNGRGIP DLHPAT KSALETVLTVLHAGGKFGG SSGYSVS
Sbjct: 62 FASKIDVVLHSDDSVSISDNGRGIPTDLHPATGKSALETVLTVLHAGGKFGGKSSGYSVS 121
Query: 186 GGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIR 245
GGLHGVGLSVVNALSE+LEV V RDGME+ QKYSRGKPVTTLTCHVLP +S+ QGT IR
Sbjct: 122 GGLHGVGLSVVNALSEALEVIVRRDGMEFQQKYSRGKPVTTLTCHVLPPESRGTQGTCIR 181
Query: 246 FWPDKQ---VFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGG 302
FWPDK+ +FTTAIQFDHNTIAGRIRELAFLNPK+TI+L+KED DPE++ Y+EYF+AGG
Sbjct: 182 FWPDKEGFALFTTAIQFDHNTIAGRIRELAFLNPKVTISLKKEDDDPERDLYSEYFYAGG 241
Query: 303 LEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTH 362
L EYV WLNTDKKPLHDV+GFRK+++G T+D++LQWCSDAYSDTMLGYANSIRTIDGGTH
Sbjct: 242 LTEYVSWLNTDKKPLHDVLGFRKEINGSTVDVSLQWCSDAYSDTMLGYANSIRTIDGGTH 301
Query: 363 IEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLG 422
IEGVKASLTRTLNSL KK K +K+KDISLSGEHVREGLTCI+SV+VPNPEFEGQTKTRLG
Sbjct: 302 IEGVKASLTRTLNSLAKKLKVIKEKDISLSGEHVREGLTCIVSVKVPNPEFEGQTKTRLG 361
Query: 423 NPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSS 482
NPEVRK+VDQSVQEYLTEYLELHPDVL+SI+SKSL+A KAALAAKRAR+LVR KSVL+SS
Sbjct: 362 NPEVRKIVDQSVQEYLTEYLELHPDVLESIISKSLNAYKAALAAKRARELVRSKSVLKSS 421
Query: 483 SLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
SLPGKLADCSST P ESEIFIVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 422 SLPGKLADCSSTDPAESEIFIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 471
>gi|6056198|gb|AAF02815.1|AC009400_11 putative DNA gyrase subunit B [Arabidopsis thaliana]
Length = 657
Score = 739 bits (1907), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/471 (81%), Positives = 429/471 (91%), Gaps = 4/471 (0%)
Query: 66 EAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAG 125
E+ +E+ SK Y SE IQVLEGL+ VRKRP MYIGSTG RGLHHLVYEILDNA+DEAQAG
Sbjct: 2 ESLQESSTSKDYSSEHIQVLEGLDPVRKRPGMYIGSTGSRGLHHLVYEILDNAIDEAQAG 61
Query: 126 YASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVS 185
+AS I+V L +D+SVS++DNGRGIP DLHPAT KS+LETVLTVLHAGGKFGG SSGYSVS
Sbjct: 62 FASKIDVVLHSDDSVSISDNGRGIPTDLHPATGKSSLETVLTVLHAGGKFGGKSSGYSVS 121
Query: 186 GGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIR 245
GGLHGVGLSVVNALSE+LEV V RDGME+ QKYSRGKPVTTLTCHVLP +S+ QGT IR
Sbjct: 122 GGLHGVGLSVVNALSEALEVIVRRDGMEFQQKYSRGKPVTTLTCHVLPPESRGTQGTCIR 181
Query: 246 FWPDKQ---VFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGG 302
FWPDK+ +FTTAIQFDHNTIAGRIRELAFLNPK+TI+L+KED DPE++ Y+EYF+AGG
Sbjct: 182 FWPDKEGFALFTTAIQFDHNTIAGRIRELAFLNPKVTISLKKEDDDPERDVYSEYFYAGG 241
Query: 303 LEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTH 362
L EYV WLNTDKKPLHDV+GFRK+++G T+D++LQWCSDAYSDTMLGYANSIRTIDGGTH
Sbjct: 242 LTEYVSWLNTDKKPLHDVLGFRKEINGSTVDVSLQWCSDAYSDTMLGYANSIRTIDGGTH 301
Query: 363 IEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLG 422
IEGVKASLTRTLNSL KK K +K+KDISLSGEHVREGLTCI+SV+VPNPEFEGQTKTRLG
Sbjct: 302 IEGVKASLTRTLNSLAKKLKVIKEKDISLSGEHVREGLTCIVSVKVPNPEFEGQTKTRLG 361
Query: 423 NPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSS 482
NPEVRK+VDQSVQEYLTEYLELHPDVL+SI+SKSL+A KAALAAKRAR+LVR KSVL+SS
Sbjct: 362 NPEVRKIVDQSVQEYLTEYLELHPDVLESIISKSLNAYKAALAAKRARELVRSKSVLKSS 421
Query: 483 SLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
SLPGKLADCSST P ESEIFIVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 422 SLPGKLADCSSTDPAESEIFIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 471
>gi|30680397|ref|NP_850762.1| DNA gyrase subunit B [Arabidopsis thaliana]
gi|332003318|gb|AED90701.1| DNA gyrase subunit B [Arabidopsis thaliana]
Length = 519
Score = 734 bits (1894), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/469 (79%), Positives = 417/469 (88%), Gaps = 5/469 (1%)
Query: 34 RTNFAIRGVSSQVLTRSNVVLPRAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRK 93
R F + V SQ L + N + R FLS TEA +E SK Y SEQIQVLEGL+ VRK
Sbjct: 53 RLKFQLTSVLSQRLIQRNAISSR-FLS----TEASQETTTSKGYSSEQIQVLEGLDPVRK 107
Query: 94 RPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDL 153
RP MYIGSTG RGLHHLVYEILDNA+DEAQAGYAS ++V L AD SVSV DNGRGIP DL
Sbjct: 108 RPGMYIGSTGSRGLHHLVYEILDNAIDEAQAGYASKVDVVLHADGSVSVVDNGRGIPTDL 167
Query: 154 HPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGME 213
HPAT KS+LETVLTVLHAGGKFGG+SSGYSVSGGLHGVGLSVVNALSE+LEV+VWRDGME
Sbjct: 168 HPATKKSSLETVLTVLHAGGKFGGTSSGYSVSGGLHGVGLSVVNALSEALEVSVWRDGME 227
Query: 214 YHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAF 273
+ Q YSRGKP+TTLTC VLP++SK +GT IRFWPDK+VFTTAI+FDHNTIAGRIRELAF
Sbjct: 228 HKQNYSRGKPITTLTCRVLPLESKGTKGTSIRFWPDKEVFTTAIEFDHNTIAGRIRELAF 287
Query: 274 LNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITID 333
LNPK+TI+L+KED DPEK QY+EY FAGGL EYV WLNTDK P+HDV+GFR++++G T+D
Sbjct: 288 LNPKVTISLKKEDDDPEKTQYSEYSFAGGLTEYVSWLNTDKNPIHDVLGFRREINGATVD 347
Query: 334 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 393
+ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN+L KKSKTVK+KDISLSG
Sbjct: 348 VALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNTLAKKSKTVKEKDISLSG 407
Query: 394 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 453
EHVREGLTCI+SV+VPNPEFEGQTKTRLGNPEVRK+VDQSVQEYLTE+LELHPD+L+SI+
Sbjct: 408 EHVREGLTCIVSVKVPNPEFEGQTKTRLGNPEVRKIVDQSVQEYLTEFLELHPDILESII 467
Query: 454 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIF 502
SKSL+A KAALAAKRAR+LVR KSVL+SSSLPGKLADCSST PE S ++
Sbjct: 468 SKSLNAYKAALAAKRARELVRSKSVLKSSSLPGKLADCSSTDPEVSGMY 516
>gi|357509407|ref|XP_003624992.1| DNA gyrase subunit B [Medicago truncatula]
gi|355500007|gb|AES81210.1| DNA gyrase subunit B [Medicago truncatula]
Length = 839
Score = 727 bits (1877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/602 (64%), Positives = 440/602 (73%), Gaps = 102/602 (16%)
Query: 32 KPRTNFAIRGVSSQVLTRSNVVLPRAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAV 91
KPR F++R S L SN V PRA++SS A E +N SK YGS+QIQVLEGL+ V
Sbjct: 41 KPRKRFSLRKFSVPSLV-SNGVTPRAYMSSLSAAEDIHKNDSSKAYGSDQIQVLEGLDPV 99
Query: 92 RKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPI 151
RKRP MYIGSTGPRGLHHLVYEILDNAVDEAQAG+AS I+V L AD+SVS+ADNGRGIP
Sbjct: 100 RKRPGMYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKIDVVLHADDSVSIADNGRGIPT 159
Query: 152 DLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDG 211
D+HP T KSALETVLT+LHAGGKFGG +SGYSVSGGLHGVGLSVVNALSE+LEVTVWR+G
Sbjct: 160 DMHPTTKKSALETVLTILHAGGKFGGINSGYSVSGGLHGVGLSVVNALSEALEVTVWREG 219
Query: 212 MEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIREL 271
+EY Q YSRGKPVTTL C +LP ++KDRQGTRI+FWPDK+VFTTAI+F++NTIAGRIREL
Sbjct: 220 LEYTQTYSRGKPVTTLNCVMLPFENKDRQGTRIKFWPDKEVFTTAIEFEYNTIAGRIREL 279
Query: 272 AFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK----------------- 314
AFLNPKLTIALRKED+DPEK Q NEYF+AGGL EYVQ+LNTDK
Sbjct: 280 AFLNPKLTIALRKEDNDPEKVQSNEYFYAGGLAEYVQFLNTDKESEGLFESDNGRWEGRF 339
Query: 315 ---------------------------KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTM 347
K +HDV+ FRK++DGIT+D+ALQWC DAYSDT+
Sbjct: 340 WYSGVSESAADVSALICFSNSLAWSVLKAVHDVLSFRKEIDGITVDIALQWCEDAYSDTI 399
Query: 348 LGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVRE--------- 398
LGYANSIRT+DGGTHI+G+KASLTRTLNSLGKKSK +K + G +
Sbjct: 400 LGYANSIRTVDGGTHIDGMKASLTRTLNSLGKKSKVIKQFQLFFYGHDSKRQNEKRNSYY 459
Query: 399 -----GL----------------TCII---------------------------SVRVPN 410
GL TC + SV+VPN
Sbjct: 460 LLHNFGLWIVLLNRYQVIGRFRNTCFMPLTQNKCQEKDITLSGEHVREGLTCVVSVKVPN 519
Query: 411 PEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRAR 470
PEFEGQTKTRLGNPEVRKVVDQS+QEYLTEYLELHPDVLDS+LSK+L+A KAALAAKRAR
Sbjct: 520 PEFEGQTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVLSKALNAFKAALAAKRAR 579
Query: 471 DLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQE 530
+LVRQKSVLRSSSLPGKLADCSS+ PE+ EIFIVEGDSAGGSAKQGRDRRFQV E
Sbjct: 580 ELVRQKSVLRSSSLPGKLADCSSSNPEDCEIFIVEGDSAGGSAKQGRDRRFQVKYTLSDE 639
Query: 531 SI 532
S+
Sbjct: 640 SL 641
>gi|326518120|dbj|BAK07312.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 722
Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/508 (72%), Positives = 429/508 (84%), Gaps = 9/508 (1%)
Query: 26 SSSLFFKPRTNFAIRGVSSQVLTRSNVVLPRAFLSSSIATEAFKENPVSKTYGSEQIQVL 85
S+ L F+PR V++ V R+ V + RAF++S+ A++A +E V+ Y + +QVL
Sbjct: 38 SARLPFRPRV------VAAAVPGRNGVAV-RAFMASTAASDAMQEKRVAGEYTAANVQVL 90
Query: 86 EGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADN 145
E L+ VRKRP MYIGSTGPRGLHHLVYEILDNAVDEAQAGYA+ I V L DNSVSV DN
Sbjct: 91 EALDGVRKRPGMYIGSTGPRGLHHLVYEILDNAVDEAQAGYATEINVVLHDDNSVSVTDN 150
Query: 146 GRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEV 205
GRGIP D+HP T KS +ETVLT++HAGGKFGGS+S YSV+GGLHGVGLSVVNALSE+LEV
Sbjct: 151 GRGIPTDIHPQTKKSCVETVLTLMHAGGKFGGSTSSYSVAGGLHGVGLSVVNALSEALEV 210
Query: 206 TVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIA 265
TV RDG EY Q YSRGKP+T L+ LP +S RQG+ IRFWPDK++FTT I+FD +TI+
Sbjct: 211 TVCRDGKEYRQHYSRGKPLTMLSSTTLPDESSSRQGSCIRFWPDKEIFTTTIEFDFSTIS 270
Query: 266 GRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRK 325
RIRELAFLNP+LTI L KE+ D + Q+NEY +AGGL EYV WLNTDKKPLHD + FRK
Sbjct: 271 SRIRELAFLNPELTITLTKEEQDAQV-QHNEYCYAGGLVEYVAWLNTDKKPLHDPIAFRK 329
Query: 326 DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVK 385
++DGI +D++LQWCSD+YSDT+LGYANSIRTIDGGTHIEG+K SLTRT+N+ KKSK +K
Sbjct: 330 ELDGIIVDVSLQWCSDSYSDTVLGYANSIRTIDGGTHIEGLKTSLTRTINNFAKKSKIMK 389
Query: 386 DKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELH 445
DKDISLSGEHVREG+TCIISV+VPNPEFEGQTKTRLGNPEVR++V+QSVQE LTEYLELH
Sbjct: 390 DKDISLSGEHVREGMTCIISVKVPNPEFEGQTKTRLGNPEVRRIVEQSVQENLTEYLELH 449
Query: 446 PDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVE 505
PDVLDSILSKSL+ALKAALAAKRAR+LVR KSVL+SSSLPGKLADC+S+ P E EIFIVE
Sbjct: 450 PDVLDSILSKSLNALKAALAAKRARELVRTKSVLKSSSLPGKLADCASSNPAECEIFIVE 509
Query: 506 GDSAGGSAKQGRDRRFQVIINPLQESIF 533
GDSAGGSAKQGRDR+FQ I+ PL+ I
Sbjct: 510 GDSAGGSAKQGRDRKFQAIL-PLRGKIL 536
>gi|357130405|ref|XP_003566839.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
[Brachypodium distachyon]
Length = 723
Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/483 (74%), Positives = 414/483 (85%), Gaps = 2/483 (0%)
Query: 51 NVVLPRAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHL 110
N V RAF++S+ A+EA +E P S Y + +QVLE L+ VRKRP MYIGSTGPRGLHHL
Sbjct: 57 NGVSVRAFMASTAASEAMQEKPASGEYTAANVQVLEALDGVRKRPGMYIGSTGPRGLHHL 116
Query: 111 VYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLH 170
VYEILDNAVDEAQAGYA+ I V L DNSVSV DNGRGIP D+HP T KS +ETVLT++H
Sbjct: 117 VYEILDNAVDEAQAGYATKINVVLHDDNSVSVTDNGRGIPTDIHPQTKKSCVETVLTLMH 176
Query: 171 AGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCH 230
AGGKFGGS+S YSV+GGLHGVGLSVVNALSE+L+VTV+RDG EY Q YSRGKP+TTL+
Sbjct: 177 AGGKFGGSTSSYSVAGGLHGVGLSVVNALSEALDVTVYRDGKEYRQSYSRGKPLTTLSST 236
Query: 231 VLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPE 290
+ +S RQGT IRFWPDK +FTT I FD NTI+ RIRELAFLNP+LTI L KE+ D E
Sbjct: 237 TVYGESSTRQGTCIRFWPDKDIFTTTIGFDFNTISSRIRELAFLNPELTITLTKEEDDAE 296
Query: 291 KNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGY 350
+NEY +AGGL EYV WLNTDKKPLHD + FRK++DGI +D++LQWCSD+YSDT+LGY
Sbjct: 297 V-LHNEYCYAGGLVEYVAWLNTDKKPLHDPIAFRKELDGIIVDVSLQWCSDSYSDTVLGY 355
Query: 351 ANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPN 410
ANSIRTIDGGTHIEG+K SLTRT+NS K SK +KDKDISLSGEHVREG+TCII+V+VPN
Sbjct: 356 ANSIRTIDGGTHIEGLKTSLTRTVNSFAKNSKAIKDKDISLSGEHVREGMTCIIAVKVPN 415
Query: 411 PEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRAR 470
PEFEGQTKTRLGNPEVRK+V+QSVQE LTEYLELHPDVLDSILSKSL+ALKAALAAKRAR
Sbjct: 416 PEFEGQTKTRLGNPEVRKIVEQSVQENLTEYLELHPDVLDSILSKSLNALKAALAAKRAR 475
Query: 471 DLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQE 530
+LVR KSVL+SSSLPGKLADC+S+ P ESEIFIVEGDSAGGSAKQGRDR+FQ I+ PL+
Sbjct: 476 ELVRTKSVLKSSSLPGKLADCASSNPAESEIFIVEGDSAGGSAKQGRDRKFQAIL-PLRG 534
Query: 531 SIF 533
I
Sbjct: 535 KIL 537
>gi|242052563|ref|XP_002455427.1| hypothetical protein SORBIDRAFT_03g010630 [Sorghum bicolor]
gi|241927402|gb|EES00547.1| hypothetical protein SORBIDRAFT_03g010630 [Sorghum bicolor]
Length = 729
Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/483 (74%), Positives = 414/483 (85%), Gaps = 3/483 (0%)
Query: 51 NVVLPRAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHL 110
N V RAF++S+ A+EA E V+ Y + +QVLE L+ VR RP MYIGSTGPRGLHHL
Sbjct: 64 NGVPVRAFMASTTASEAMHEKRVAAEYTAANVQVLEALDGVRTRPGMYIGSTGPRGLHHL 123
Query: 111 VYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLH 170
VYEILDNAVDE QAG+AS I+V L DNSVSV DNGRGIP D+HP T KS +ETVLT++H
Sbjct: 124 VYEILDNAVDEGQAGHASKIDVVLHDDNSVSVTDNGRGIPTDMHPQTKKSCVETVLTLMH 183
Query: 171 AGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCH 230
AGGKFGGS SGYSVSGGLHGVGLSVVNALSE+LEVTVWRDG +Y Q YSRGKP T L+
Sbjct: 184 AGGKFGGSKSGYSVSGGLHGVGLSVVNALSEALEVTVWRDGNKYRQSYSRGKPTTPLSSI 243
Query: 231 VLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPE 290
L ++ RQGT IRFWPDK +FTT I FD NTI+ RIRELAFLNP+LTI L KE+
Sbjct: 244 TLTGETSPRQGTSIRFWPDKDIFTTTIDFDFNTISSRIRELAFLNPELTITLTKEEG--H 301
Query: 291 KNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGY 350
Q+NEY +AGGL EYV+WLNTDKKPLHD + FRK++DGIT+D++LQW SD+YSDT+LGY
Sbjct: 302 TVQHNEYCYAGGLVEYVKWLNTDKKPLHDPIAFRKELDGITVDVSLQWSSDSYSDTVLGY 361
Query: 351 ANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPN 410
ANSIRTIDGGTHI+G+KASLTRT+N+ KKSKT+KDKDI+LSGEHVREG+TC+ISV+VP+
Sbjct: 362 ANSIRTIDGGTHIDGLKASLTRTINNFAKKSKTIKDKDITLSGEHVREGMTCVISVKVPS 421
Query: 411 PEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRAR 470
PEFEGQTKTRLGNPEVR++V+Q+VQE LTEYLELHPDVLDSILSKSL+ALKA+LAAKRAR
Sbjct: 422 PEFEGQTKTRLGNPEVRRIVEQAVQENLTEYLELHPDVLDSILSKSLNALKASLAAKRAR 481
Query: 471 DLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQE 530
+LVR KSVL+SSS+PGKLADC+ST PEESEIFIVEGDSAGGSAKQGRDRRFQ I+ PL+
Sbjct: 482 ELVRSKSVLKSSSIPGKLADCASTNPEESEIFIVEGDSAGGSAKQGRDRRFQAIL-PLRG 540
Query: 531 SIF 533
I
Sbjct: 541 KIL 543
>gi|115435866|ref|NP_001042691.1| Os01g0268300 [Oryza sativa Japonica Group]
gi|75285839|sp|Q5NBJ3.1|GYRB_ORYSJ RecName: Full=DNA gyrase subunit B, chloroplastic/mitochondrial;
Flags: Precursor
gi|56783730|dbj|BAD81142.1| putative DNA gyrase B subunit [Oryza sativa Japonica Group]
gi|56783751|dbj|BAD81163.1| putative DNA gyrase B subunit [Oryza sativa Japonica Group]
gi|113532222|dbj|BAF04605.1| Os01g0268300 [Oryza sativa Japonica Group]
Length = 729
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/483 (75%), Positives = 419/483 (86%), Gaps = 2/483 (0%)
Query: 51 NVVLPRAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHL 110
N V RAF++S+ A+EA +E V+ Y + +QVLE L+ VR RP MYIGSTG RGLHHL
Sbjct: 63 NGVAVRAFMASTAASEAMQEKRVAGEYTAANVQVLEALDGVRTRPGMYIGSTGSRGLHHL 122
Query: 111 VYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLH 170
VYEILDNAVDEAQAGYA+ ++V L DNSVSV DNGRGIP D+HP T KS +ETVLT++H
Sbjct: 123 VYEILDNAVDEAQAGYATKVDVILHGDNSVSVTDNGRGIPTDIHPQTKKSCVETVLTLMH 182
Query: 171 AGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCH 230
AGGKFGGS SGY+VSGGLHGVGLSVVNALSE+LEVTVWRDG EY Q YSRGK +T LT
Sbjct: 183 AGGKFGGSKSGYTVSGGLHGVGLSVVNALSEALEVTVWRDGKEYRQNYSRGKAITMLTSR 242
Query: 231 VLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPE 290
L +S RQGTRIRFWPDK +FTT + FD NTIAGRIRELAFLNP+LTIAL KE+ D +
Sbjct: 243 TLSDESSSRQGTRIRFWPDKHIFTTTMDFDFNTIAGRIRELAFLNPELTIALTKEEDDLQ 302
Query: 291 KNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGY 350
Q+NEY +AGGL EYV+WLNTDKK LHD + FRK++DGIT+D++LQWCSD+YSDT+LGY
Sbjct: 303 V-QHNEYCYAGGLVEYVKWLNTDKKSLHDPIAFRKEMDGITVDVSLQWCSDSYSDTVLGY 361
Query: 351 ANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPN 410
ANSIRTIDGGTHI+G+K SLTRT+N+ KKSKT+KDKDISLSGEHVREG+TCII+V+VPN
Sbjct: 362 ANSIRTIDGGTHIDGLKTSLTRTINNFAKKSKTLKDKDISLSGEHVREGMTCIIAVKVPN 421
Query: 411 PEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRAR 470
PEFEGQTKTRLGNPEVR++V+QSVQE LTEYLELHPDVLDSILSKSL+ALKAALAAKRAR
Sbjct: 422 PEFEGQTKTRLGNPEVRRIVEQSVQENLTEYLELHPDVLDSILSKSLNALKAALAAKRAR 481
Query: 471 DLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQE 530
+LVR KSVL+SSSLPGKLADC+S+ PEESEIFIVEGDSAGGSAKQGRDR+FQ I+ PL+
Sbjct: 482 ELVRTKSVLKSSSLPGKLADCASSDPEESEIFIVEGDSAGGSAKQGRDRKFQAIL-PLRG 540
Query: 531 SIF 533
I
Sbjct: 541 KIL 543
>gi|148906969|gb|ABR16629.1| unknown [Picea sitchensis]
Length = 737
Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/551 (64%), Positives = 439/551 (79%), Gaps = 20/551 (3%)
Query: 1 MARLLLK-APYLHIRVLMASRCFCSFSSSLFFKPRT---NFAIRGVSSQVLTRSNV---- 52
MA ++K P +R+L ASR CS S++ F P +F S + TR
Sbjct: 3 MAMAMIKLPPTTSLRLLTASRSLCS-SNTRFRAPHIRLISFVANVSQSSIPTRRACTFRR 61
Query: 53 ---VLP-------RAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGST 102
V+P RAF SS+++TE ++P +K+Y + QIQVLEGL+ VRKRP MYIGST
Sbjct: 62 ITNVIPARYSTTIRAFTSSAVSTEPSSDSPAAKSYDAGQIQVLEGLDPVRKRPGMYIGST 121
Query: 103 GPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSAL 162
GPRGLHHLVYE+LDNA+DEAQAG+A+NI+V + D SVS+ D+GRGIP DLHP T+KSAL
Sbjct: 122 GPRGLHHLVYEVLDNAIDEAQAGFATNIDVIIFLDGSVSIMDDGRGIPTDLHPVTHKSAL 181
Query: 163 ETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGK 222
ETVLTVLHAGGKFGG SSGYSVSGGLHGVGLSVVNALSE LEVTVWRDG E++Q ++ GK
Sbjct: 182 ETVLTVLHAGGKFGGESSGYSVSGGLHGVGLSVVNALSEKLEVTVWRDGKEWNQTFACGK 241
Query: 223 PVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL 282
PVT LT + + + K RQGTR+RFWPDK+VFTT +FD+NTI GR RELAFLNP++ I L
Sbjct: 242 PVTELTSNEILGEFKFRQGTRVRFWPDKEVFTTTTEFDYNTIVGRARELAFLNPQVKITL 301
Query: 283 RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDA 342
++E+ D E YNEY +AGGL EYV WLN DK P+ + F ++ DG+ +++ALQWCSDA
Sbjct: 302 KQENKDAENVTYNEYHYAGGLVEYVCWLNRDKTPILKPISFTREKDGVIVNVALQWCSDA 361
Query: 343 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 402
Y+DT+LGYANSIRT DGG+H++GVK++LTRT N+LG+KSK +K+KD +LSGEHVREGLT
Sbjct: 362 YTDTLLGYANSIRTSDGGSHMDGVKSALTRTFNNLGRKSKLIKEKDENLSGEHVREGLTG 421
Query: 403 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 462
I+SV+VP PEFEGQTKTRLGNPEVR++VDQ+VQEYLTEYLE +P VL+SILSK+L+A KA
Sbjct: 422 IVSVKVPKPEFEGQTKTRLGNPEVRRIVDQAVQEYLTEYLECNPGVLESILSKALNAYKA 481
Query: 463 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 522
A+AAK+AR+LVR+KSVLR S+LPGKLADCS++ P E+EIFIVEG+SAGGSAKQGRDRRFQ
Sbjct: 482 AMAAKKARELVRRKSVLRPSALPGKLADCSASDPREAEIFIVEGESAGGSAKQGRDRRFQ 541
Query: 523 VIINPLQESIF 533
I+ PL+ I
Sbjct: 542 AIL-PLRGKIL 551
>gi|293336227|ref|NP_001168561.1| uncharacterized protein LOC100382343 [Zea mays]
gi|223949177|gb|ACN28672.1| unknown [Zea mays]
gi|414877013|tpg|DAA54144.1| TPA: hypothetical protein ZEAMMB73_725573 [Zea mays]
Length = 726
Score = 703 bits (1815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/501 (74%), Positives = 423/501 (84%), Gaps = 4/501 (0%)
Query: 33 PRTNFAIRGVSSQVLTRSNVVLPRAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVR 92
PR F V++ TR N V RAF++S+ A+EA E VS Y + +QVLE L+ VR
Sbjct: 44 PRLLFGPSAVAAAA-TRRNGVRVRAFMASTTASEAMHEKQVSAEYTAANVQVLEALDGVR 102
Query: 93 KRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPID 152
RP MYIGSTGPRGLHHLVYEILDNAVDEAQAG+AS I+V L DNSVSV DNGRGIP D
Sbjct: 103 TRPGMYIGSTGPRGLHHLVYEILDNAVDEAQAGHASKIDVVLHDDNSVSVTDNGRGIPTD 162
Query: 153 LHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGM 212
+HP T KS +ETVLT++HAGGKFGGS SGYSVSGGLHGVGLSVVNALSE+LEVTVWRDG
Sbjct: 163 MHPQTKKSCVETVLTLMHAGGKFGGSKSGYSVSGGLHGVGLSVVNALSETLEVTVWRDGK 222
Query: 213 EYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELA 272
E+ Q YSRGKP T LT L ++ RQGTRIRFWPDK +FTT I FD NTI+ RIRELA
Sbjct: 223 EHRQSYSRGKPTTRLTSSTLTGETSSRQGTRIRFWPDKDIFTTTIDFDFNTISSRIRELA 282
Query: 273 FLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITI 332
FLNP+LTI L KE+ Q NEY +AGGL EYV+WLNTDKKPLHD + FRK++DGIT+
Sbjct: 283 FLNPELTIILTKEEG--HTVQRNEYCYAGGLVEYVKWLNTDKKPLHDPIAFRKELDGITV 340
Query: 333 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 392
D++LQW SD+YSDT+LGYANSIRTIDGGTHI+G+KASLTRT+N+L KKSKT+KDKDI+LS
Sbjct: 341 DVSLQWSSDSYSDTVLGYANSIRTIDGGTHIDGLKASLTRTINNLAKKSKTIKDKDITLS 400
Query: 393 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 452
GEHVREG+TCIISV+VP+PEFEGQTKTRLGNPEVR++V+QSVQE LTEYLELHPDVLDSI
Sbjct: 401 GEHVREGMTCIISVKVPSPEFEGQTKTRLGNPEVRRIVEQSVQENLTEYLELHPDVLDSI 460
Query: 453 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 512
LSKSL+ALKAALAAKRAR+LVR KSVL+SSSLPGKLADC+S PEESEIFIVEGDSAGGS
Sbjct: 461 LSKSLNALKAALAAKRARELVRTKSVLKSSSLPGKLADCASANPEESEIFIVEGDSAGGS 520
Query: 513 AKQGRDRRFQVIINPLQESIF 533
AKQGRDRRFQ I+ PL+ I
Sbjct: 521 AKQGRDRRFQAIL-PLRGKIL 540
>gi|125569849|gb|EAZ11364.1| hypothetical protein OsJ_01229 [Oryza sativa Japonica Group]
Length = 753
Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/507 (71%), Positives = 419/507 (82%), Gaps = 26/507 (5%)
Query: 51 NVVLPRAFLSSSIATEAFKENPVSKTYGSEQIQ------------------------VLE 86
N V RAF++S+ A+EA +E V+ Y + +Q VLE
Sbjct: 63 NGVAVRAFMASTAASEAMQEKRVAGEYTAANVQHILWIPYFHGHILWIPYFDGGSWSVLE 122
Query: 87 GLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNG 146
L+ VR RP MYIGSTG RGLHHLVYEILDNAVDEAQAGYA+ ++V L DNSVSV DNG
Sbjct: 123 ALDGVRTRPGMYIGSTGSRGLHHLVYEILDNAVDEAQAGYATKVDVILHGDNSVSVTDNG 182
Query: 147 RGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVT 206
RGIP D+HP T KS +ETVLT++HAGGKFGGS SGY+VSGGLHGVGLSVVNALSE+LEVT
Sbjct: 183 RGIPTDIHPQTKKSCVETVLTLMHAGGKFGGSKSGYTVSGGLHGVGLSVVNALSEALEVT 242
Query: 207 VWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAG 266
VWRDG EY Q YSRGK +T LT L +S RQGTRIRFWPDK +FTT + FD NTIAG
Sbjct: 243 VWRDGKEYRQNYSRGKAITMLTSRTLSDESSSRQGTRIRFWPDKHIFTTTMDFDFNTIAG 302
Query: 267 RIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKD 326
RIRELAFLNP+LTIAL KE+ D + Q+NEY +AGGL EYV+WLNTDKK LHD + FRK+
Sbjct: 303 RIRELAFLNPELTIALTKEEDDLQV-QHNEYCYAGGLVEYVKWLNTDKKSLHDPIAFRKE 361
Query: 327 VDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKD 386
+DGIT+D++LQWCSD+YSDT+LGYANSIRTIDGGTHI+G+K SLTRT+N+ KKSKT+KD
Sbjct: 362 MDGITVDVSLQWCSDSYSDTVLGYANSIRTIDGGTHIDGLKTSLTRTINNFAKKSKTLKD 421
Query: 387 KDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHP 446
KDISLSGEHVREG+TCII+V+VPNPEFEGQTKTRLGNPEVR++V+QSVQE LTEYLELHP
Sbjct: 422 KDISLSGEHVREGMTCIIAVKVPNPEFEGQTKTRLGNPEVRRIVEQSVQENLTEYLELHP 481
Query: 447 DVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEG 506
DVLDSILSKSL+ALKAALAAKRAR+LVR KSVL+SSSLPGKLADC+S+ PEESEIFIVEG
Sbjct: 482 DVLDSILSKSLNALKAALAAKRARELVRTKSVLKSSSLPGKLADCASSDPEESEIFIVEG 541
Query: 507 DSAGGSAKQGRDRRFQVIINPLQESIF 533
DSAGGSAKQGRDR+FQ I+ PL+ I
Sbjct: 542 DSAGGSAKQGRDRKFQAIL-PLRGKIL 567
>gi|125525330|gb|EAY73444.1| hypothetical protein OsI_01322 [Oryza sativa Indica Group]
Length = 647
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/450 (74%), Positives = 382/450 (84%), Gaps = 21/450 (4%)
Query: 84 VLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVA 143
VLE L+ VR RP MYIGSTG RGLHHLVYEILDNAVDEAQAGYA+ I
Sbjct: 33 VLEALDGVRTRPGMYIGSTGSRGLHHLVYEILDNAVDEAQAGYATKI------------- 79
Query: 144 DNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESL 203
P D+HP T KS +ETVLT++HAGGKFGGS SGY+VSGGLHGVGLSVVNALSE+L
Sbjct: 80 ------PTDIHPQTKKSCVETVLTLMHAGGKFGGSKSGYTVSGGLHGVGLSVVNALSEAL 133
Query: 204 EVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNT 263
EVTVWRDG EY YSRGK +T LT L +S RQGTRIRFWPDK +FTT + FD NT
Sbjct: 134 EVTVWRDGKEYRLNYSRGKAITMLTSRTLSDESSSRQGTRIRFWPDKHIFTTTMDFDFNT 193
Query: 264 IAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF 323
IAGRIRELAFLNP+LTIAL KE+ D + Q+NEY +AGGL EYV+WLNTDKK LHD + F
Sbjct: 194 IAGRIRELAFLNPELTIALTKEEDDLQV-QHNEYCYAGGLVEYVKWLNTDKKSLHDPIAF 252
Query: 324 RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKT 383
RK++DGIT+D++LQWCSD+YSDT+LGYANSIRTIDGGTHI+G+K SLTRT+N+ KKSKT
Sbjct: 253 RKEMDGITVDVSLQWCSDSYSDTVLGYANSIRTIDGGTHIDGLKTSLTRTINNFAKKSKT 312
Query: 384 VKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLE 443
+KDKDISLSGEHVREG+TCII+V+VPNPEFEGQTKTRLGNPEVR++V+QSVQE LTEYLE
Sbjct: 313 LKDKDISLSGEHVREGMTCIIAVKVPNPEFEGQTKTRLGNPEVRRIVEQSVQENLTEYLE 372
Query: 444 LHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFI 503
LHPDVLDSILSKSL+ALKAALAAKRAR+LVR KSVL+SSSLPGKLADC+S+ PEESEIFI
Sbjct: 373 LHPDVLDSILSKSLNALKAALAAKRARELVRTKSVLKSSSLPGKLADCASSDPEESEIFI 432
Query: 504 VEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
VEGDSAGGSAKQGRDR+FQ I+ PL+ I
Sbjct: 433 VEGDSAGGSAKQGRDRKFQAIL-PLRGKIL 461
>gi|168056555|ref|XP_001780285.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668339|gb|EDQ54949.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 640
Score = 633 bits (1633), Expect = e-179, Method: Compositional matrix adjust.
Identities = 305/455 (67%), Positives = 383/455 (84%), Gaps = 4/455 (0%)
Query: 82 IQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVS 141
+QVLEGLEAVRKRP MYIGSTG +GLHHLVYE+LDNA+DEAQAG+AS ++V + D SVS
Sbjct: 1 MQVLEGLEAVRKRPGMYIGSTGTKGLHHLVYEVLDNAIDEAQAGFASTVDVVIHTDGSVS 60
Query: 142 VADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSE 201
++DNGRGIP D+HP T KSALETVLTVLHAGGKFGG SSGYSVSGGLHGVG+SVVNALSE
Sbjct: 61 ISDNGRGIPTDVHPVTRKSALETVLTVLHAGGKFGGESSGYSVSGGLHGVGISVVNALSE 120
Query: 202 SLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ---VFTTAIQ 258
++VTVWR+G EY Q + GK V+ L+ LP D K R GTR++F PDKQ +FT+ +
Sbjct: 121 RVDVTVWRNGHEYRQSFEFGKAVSPLSAFPLPNDQKGRTGTRVKFLPDKQGKQLFTSTTE 180
Query: 259 FDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH 318
FD+NTI+GR RELAFLNP++TI L +E ++ EK + N Y F+GGL EYV WLN DK+ LH
Sbjct: 181 FDYNTISGRARELAFLNPQVTINLMQEHANSEKVRSNAYHFSGGLNEYVLWLNNDKERLH 240
Query: 319 DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLG 378
+ + ++ +G+ ID+ALQW +D Y+DT+LGYANSIRT DGGTH++G+KA++TRTLN+LG
Sbjct: 241 EPISIHREREGVAIDVALQWSADQYTDTILGYANSIRTSDGGTHLDGMKAAVTRTLNTLG 300
Query: 379 KKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYL 438
+K+K +K+KD +LSG+H REGLTC+++V+VPNPEFEGQTKTRLGNPEVR++VDQ+VQE +
Sbjct: 301 RKAKILKEKDENLSGDHAREGLTCVVAVKVPNPEFEGQTKTRLGNPEVRRIVDQAVQELV 360
Query: 439 TEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEE 498
TEYLE HP+ L++ILSK+L A +AA+AAK+AR+LVR+K+VL+SS LPGKL+DCS T P
Sbjct: 361 TEYLEQHPNTLEAILSKALQAFRAAMAAKKARELVRRKNVLKSSMLPGKLSDCSCTDPRN 420
Query: 499 SEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
+EIFIVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 421 AEIFIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 454
>gi|168067741|ref|XP_001785766.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662596|gb|EDQ49430.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 642
Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust.
Identities = 302/457 (66%), Positives = 386/457 (84%), Gaps = 6/457 (1%)
Query: 82 IQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVS 141
+QVLEGLEAVRKRP MYIGSTG +GLHHLVYE+LDNA+DEAQAG+AS +++ + D SVS
Sbjct: 1 MQVLEGLEAVRKRPGMYIGSTGAKGLHHLVYEVLDNAIDEAQAGFASTVDIVMHTDGSVS 60
Query: 142 VADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSE 201
++DNGRGIP D+HP T KSALETVLTVLHAGGKFGG +SGYSVSGGLHGVG+SVVNALSE
Sbjct: 61 ISDNGRGIPTDVHPVTGKSALETVLTVLHAGGKFGGDNSGYSVSGGLHGVGISVVNALSE 120
Query: 202 SLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ-----VFTTA 256
++VTVWR+G EY Q + GK V+ L+ LP D K R GT ++F PDKQ +FT+
Sbjct: 121 RVDVTVWRNGHEYKQSFEFGKSVSHLSGSRLPRDQKGRTGTLVKFLPDKQGKSFLMFTST 180
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+FD++TI+GR RELAFLNP++TI L+++ ++PEK + N Y F+GGL EYV WLN DK+
Sbjct: 181 TEFDYSTISGRTRELAFLNPQVTIYLKQDHANPEKIRSNTYHFSGGLSEYVLWLNNDKER 240
Query: 317 LHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNS 376
LH+ + + +GI ID++LQWC+D+Y+DT++GYANSIRT DGGTH++G+KA++TRTLN+
Sbjct: 241 LHEPISIHRKKEGIIIDVSLQWCADSYTDTIIGYANSIRTSDGGTHLDGIKAAVTRTLNT 300
Query: 377 LGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQE 436
LG+K+K +K+KD +LSG+H REGLTC++SV+VPNPEFEGQTKTRLGNPEVR++VDQ+VQE
Sbjct: 301 LGRKAKILKEKDENLSGDHAREGLTCVVSVKVPNPEFEGQTKTRLGNPEVRRLVDQAVQE 360
Query: 437 YLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTP 496
+TEYLE HP+ L++ILSK+L A +AA+AAK+AR+LVR+K+VL+SS LPGKL+DCS T P
Sbjct: 361 LVTEYLEQHPNTLEAILSKALQAFRAAMAAKKARELVRRKNVLKSSMLPGKLSDCSCTDP 420
Query: 497 EESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
+ SEIFIVEGDSAGGSAKQGRDRR+Q I+ PL+ I
Sbjct: 421 KNSEIFIVEGDSAGGSAKQGRDRRYQAIL-PLRGKIL 456
>gi|302761372|ref|XP_002964108.1| hypothetical protein SELMODRAFT_405784 [Selaginella moellendorffii]
gi|300167837|gb|EFJ34441.1| hypothetical protein SELMODRAFT_405784 [Selaginella moellendorffii]
Length = 723
Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust.
Identities = 300/478 (62%), Positives = 382/478 (79%), Gaps = 7/478 (1%)
Query: 56 RAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEIL 115
R F++++ T+A +P S Y + +IQVLEGLE VR+RP MYIGSTGPRGLHHL+YE+L
Sbjct: 67 RLFVTATAVTQAPAPSPTS--YDAGKIQVLEGLEPVRRRPGMYIGSTGPRGLHHLIYEVL 124
Query: 116 DNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKF 175
DNA+DE QAG+A+ ++V L +D SVS+ DNGRGIP D+HPAT KS LETVLTVLHAGGKF
Sbjct: 125 DNAIDEVQAGFATQVDVVLHSDGSVSITDNGRGIPTDVHPATGKSTLETVLTVLHAGGKF 184
Query: 176 GGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVD 235
GG SGY+VSGGLHGVG+SVVNALS+ LE TVWR+G EY Q + RGK V +LT LP +
Sbjct: 185 GGDESGYTVSGGLHGVGVSVVNALSKRLEATVWRNGQEYRQVFQRGKAVGSLTTRSLPRE 244
Query: 236 SKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYN 295
S R GT ++F PD +VFTT FD N ++ R+RE+AFLNP++TI L++E + ++
Sbjct: 245 SSSRTGTCVKFLPDDEVFTTTTAFDPNIVSSRLREVAFLNPEVTINLKEESATTDE---- 300
Query: 296 EYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIR 355
+ F GGL EYV+WLN DK +HD + F + D I++++++QWCSDAYSDT+LGYANSIR
Sbjct: 301 VFHFGGGLVEYVEWLNQDKTKIHDPISFSVEKDDISVNVSMQWCSDAYSDTLLGYANSIR 360
Query: 356 TIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEG 415
T DGGTH++G+K LTRTLN LG++SK +++K +LSGEH REGLTC+ISV+VP PEFEG
Sbjct: 361 TADGGTHLDGLKMGLTRTLNILGRRSKAIREKGDNLSGEHAREGLTCVISVKVPEPEFEG 420
Query: 416 QTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQ 475
QTKTRLGN EVRK+V+Q+V E +TEYLE PD L++ILSK+L A KAA AAK+AR+LVR+
Sbjct: 421 QTKTRLGNVEVRKIVEQAVIEQVTEYLEFRPDTLEAILSKALQAYKAAEAAKKARELVRR 480
Query: 476 KSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
K+VL++S+LPGKLADC+S+ P SEIFIVEG+SAGGSAKQGRDR FQ I+ PL+ I
Sbjct: 481 KNVLKTSTLPGKLADCTSSDPRVSEIFIVEGESAGGSAKQGRDRAFQAIL-PLKGKIL 537
>gi|302820792|ref|XP_002992062.1| hypothetical protein SELMODRAFT_162108 [Selaginella moellendorffii]
gi|300140184|gb|EFJ06911.1| hypothetical protein SELMODRAFT_162108 [Selaginella moellendorffii]
Length = 618
Score = 580 bits (1494), Expect = e-163, Method: Compositional matrix adjust.
Identities = 281/437 (64%), Positives = 354/437 (81%), Gaps = 5/437 (1%)
Query: 97 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 156
MYIGSTGPRGLHHL+YE+LDNA+DE QAG+A+ ++V L +D SVS+ DNGRGIP D+HPA
Sbjct: 1 MYIGSTGPRGLHHLIYEVLDNAIDEVQAGFATQVDVVLHSDGSVSITDNGRGIPTDVHPA 60
Query: 157 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 216
T KS LETVLTVLHAGGKFGG SGY+VSGGLHGVG+SVVNALS+ LE TVWR+G EY Q
Sbjct: 61 TGKSTLETVLTVLHAGGKFGGDESGYTVSGGLHGVGVSVVNALSKRLEATVWRNGQEYRQ 120
Query: 217 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 276
+ RGK V +LT LP +S R GT ++F PD +VFTT FD N ++ R+RE+AFLNP
Sbjct: 121 VFQRGKAVGSLTTRSLPRESSSRTGTCVKFLPDDEVFTTTTAFDPNIVSSRLREVAFLNP 180
Query: 277 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 336
++TI L++E + ++ + F GGL EYV+WLN DK +HD + F + D I++++++
Sbjct: 181 EVTINLKEESATTDE----VFHFGGGLVEYVEWLNQDKTKIHDPISFSVEKDDISVNVSM 236
Query: 337 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 396
QWCSDAYSDT+LGYANSIRT DGGTH++G+K LTRTLN LG++SK +++K +LSGEH
Sbjct: 237 QWCSDAYSDTLLGYANSIRTADGGTHLDGLKMGLTRTLNILGRRSKAIREKGDNLSGEHA 296
Query: 397 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 456
REGLTC+ISV+VP PEFEGQTKTRLGN EVRK+V+Q+V E +TEYLE PD L++ILSK+
Sbjct: 297 REGLTCVISVKVPEPEFEGQTKTRLGNVEVRKIVEQAVIEQVTEYLEFRPDTLEAILSKA 356
Query: 457 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 516
L A KAA AAK+AR+LVR+K+VL++S+LPGKLADC+S+ P SEIFIVEG+SAGGSAKQG
Sbjct: 357 LQAYKAAEAAKKARELVRRKNVLKTSTLPGKLADCTSSDPRVSEIFIVEGESAGGSAKQG 416
Query: 517 RDRRFQVIINPLQESIF 533
RDR FQ I+ PL+ I
Sbjct: 417 RDRAFQAIL-PLKGKIL 432
>gi|254424108|ref|ZP_05037826.1| DNA gyrase, B subunit [Synechococcus sp. PCC 7335]
gi|196191597|gb|EDX86561.1| DNA gyrase, B subunit [Synechococcus sp. PCC 7335]
Length = 645
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 279/465 (60%), Positives = 358/465 (76%), Gaps = 10/465 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ YG++QIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DNAVDEA AG+ ++I
Sbjct: 1 MANNYGAQQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNAVDEALAGHCTHITA 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
AL AD SV+V D+GRGIP D+HP T KSALETVLTVLHAGGKFGG S GY VSGGLHGVG
Sbjct: 61 ALNADGSVTVTDDGRGIPTDIHPTTGKSALETVLTVLHAGGKFGGDS-GYKVSGGLHGVG 119
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTVWR+G + Q++ +G P+ L + GT++ F PD +
Sbjct: 120 VSVVNALSEWVEVTVWREGKVHTQRFEQGNPIGKLKTS----KGSTKTGTQVTFKPDATI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSD---PEKNQYNEYFFAGGLEEYVQW 309
FT ++FD++TIA R+RELA+LN + I D +K Q + YF+ GG+ EYV++
Sbjct: 176 FTHTVEFDYDTIARRLRELAYLNAGVDITFTDYRLDLIKADKPQVSHYFYEGGIREYVEY 235
Query: 310 LNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+N +K+PLH DV+ D +G+ ++ ALQWC DA+SD ++G+AN+IRT+DGGTH+EG+K
Sbjct: 236 INNEKEPLHPDVIYVNSDKNGVQVEAALQWCGDAFSDNLMGFANNIRTVDGGTHLEGLKT 295
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTRT+N + +K K KD + +++GE++REGLT ++SV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTMNVIARKRKKRKDTESNMAGENIREGLTAVVSVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+VD V E LTEYL+ +P V D+IL K++ A AA AAK+ARDLVR+KSVL SS+LPGKL
Sbjct: 356 IVDSLVGEALTEYLDFNPSVADAILEKAIQAFNAAEAAKKARDLVRRKSVLESSTLPGKL 415
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
+DCSS P ESEIFIVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 416 SDCSSRDPGESEIFIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 459
>gi|33241245|ref|NP_876187.1| DNA gyrase subunit B [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|33238775|gb|AAQ00840.1| DNA gyrase B subunit [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 658
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 284/466 (60%), Positives = 355/466 (76%), Gaps = 8/466 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DNAVDEA AG+ + I V
Sbjct: 10 VQAAYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNAVDEALAGHCNEIVV 69
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L +D S S++DNGRGIP D+HP T KSALETVLTVLHAGGKFG S GY VSGGLHGVG
Sbjct: 70 VLCSDGSASISDNGRGIPTDVHPKTGKSALETVLTVLHAGGKFG--SGGYKVSGGLHGVG 127
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTV R G ++Q++ RG P+ L PV K GT++ F PD +
Sbjct: 128 VSVVNALSEWVEVTVRRQGHIHNQRFERGAPIGNLRSTKQPVSEKKLTGTKVNFKPDTDI 187
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKED---SDPEKNQYNE-YFFAGGLEEYVQ 308
FTT I FD++ ++ R+RELA+LN + I R E SD E+ Y E YF+ GG++EYV
Sbjct: 188 FTTGIVFDYSILSSRLRELAYLNGGVKIVFRDERQSVSDKEEKAYEEVYFYEGGIKEYVA 247
Query: 309 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
++N++K LH +++ + +G+ ++ ALQWC DAYSD++LG+AN+IRT+DGGTHIEG+K
Sbjct: 248 YMNSEKDALHPEIIYVNSEKEGVQVEAALQWCIDAYSDSILGFANNIRTVDGGTHIEGLK 307
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
LTRTLNS +K KD D +L+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR
Sbjct: 308 TVLTRTLNSFARKRGKRKDGDSNLAGENIREGLTVVLSVKVPEPEFEGQTKTKLGNTEVR 367
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
+VD V E L +YLE +P V+D IL K++ A AA AA+RAR+LVR+KSVL S++LPGK
Sbjct: 368 GIVDSLVGESLAQYLEFNPSVIDLILEKAIQAFNAAEAARRARELVRRKSVLESTTLPGK 427
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 428 LADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 472
>gi|87123248|ref|ZP_01079099.1| DNA gyrase, B subunit [Synechococcus sp. RS9917]
gi|86168968|gb|EAQ70224.1| DNA gyrase, B subunit [Synechococcus sp. RS9917]
Length = 705
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 284/466 (60%), Positives = 355/466 (76%), Gaps = 8/466 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN+VDEA AG+ S IEV
Sbjct: 7 VQAAYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSVDEALAGHCSEIEV 66
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L D S SV DNGRGIP D+HP T KSALETVLTVLHAGGKFG + GY VSGGLHGVG
Sbjct: 67 VLGDDGSASVTDNGRGIPTDIHPRTGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVG 124
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTV R G + Q++ RG P+ +L PV+ K R GT + F PD ++
Sbjct: 125 VSVVNALSEWVEVTVRRQGQVHRQRFERGAPIGSLASAPQPVEEKGRTGTSVCFKPDLEI 184
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDS---DPEKNQYNE-YFFAGGLEEYVQ 308
FT I FD+ T++ R+RELA+LN + I R E + E + + E YF+ GG++EYV
Sbjct: 185 FTGGIVFDYATLSARLRELAYLNGGVRIVFRDERESALNAEGDAHEEVYFYEGGIKEYVA 244
Query: 309 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
++N +K PLH +++ + DG+ ++ ALQWC DAYSD++LG+AN+IRT+DGGTHIEG+K
Sbjct: 245 YMNAEKDPLHPEIIYVNAEKDGVQVEAALQWCVDAYSDSILGFANNIRTVDGGTHIEGLK 304
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
LTRTLN+ KK K+ D +L+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR
Sbjct: 305 TVLTRTLNAFAKKRGKRKESDSNLAGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVR 364
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
+VD V E L++YLE +P V+D IL K++ A AA AA+RAR+LVR+KSVL SS+LPGK
Sbjct: 365 GIVDSLVGEALSQYLEFNPSVIDMILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGK 424
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 425 LADCSSRDPAESEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 469
>gi|317968499|ref|ZP_07969889.1| DNA gyrase subunit B [Synechococcus sp. CB0205]
Length = 653
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 284/466 (60%), Positives = 353/466 (75%), Gaps = 10/466 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AG+ + I V
Sbjct: 7 VQAAYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGHCNEIRV 66
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
A+ D S SV+DNGRGIP D+HP T KSALETVLTVLHAGGKFG + GY VSGGLHGVG
Sbjct: 67 AIEEDGSCSVSDNGRGIPTDVHPKTGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVG 124
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EV V+R G E+ Q++ RG P+ TL + P R GT +RF PD ++
Sbjct: 125 VSVVNALSEWVEVVVYRQGKEHRQRFERGAPIGTLA--IEPAADASRTGTTVRFKPDLEI 182
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKED---SDPEKNQYNE-YFFAGGLEEYVQ 308
FT I+FD+NT++ R+RELA+LN + I R E + E + E Y + GG++EYV
Sbjct: 183 FTVGIEFDYNTLSARLRELAYLNGGVKIVFRDERPAARNAEGEAHEEIYHYEGGIKEYVA 242
Query: 309 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
++N +K LH D++ + DG+ I+ ALQWC DAYSD + G+AN+IRT+DGGTHIEG+K
Sbjct: 243 YMNAEKDALHPDIIYVNSEKDGVQIEAALQWCVDAYSDNIFGFANNIRTVDGGTHIEGLK 302
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
LTRTLN+ KK K+ D +L+GE++REGLT ++SV+VP+PEFEGQTKT+LGN EVR
Sbjct: 303 TVLTRTLNTFAKKRGKRKESDSNLAGENIREGLTAVLSVKVPDPEFEGQTKTKLGNTEVR 362
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
+VD V E L EYLE +P V+D IL K++ A AA AA+RAR+LVR+KSVL SS+LPGK
Sbjct: 363 GIVDSLVGEALGEYLEFNPSVIDLILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGK 422
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 423 LADCSSRDPGESEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 467
>gi|148241191|ref|YP_001226348.1| DNA gyrase subunit B [Synechococcus sp. RCC307]
gi|147849501|emb|CAK26995.1| DNA gyrase subunit B [Synechococcus sp. RCC307]
Length = 657
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 287/466 (61%), Positives = 354/466 (75%), Gaps = 11/466 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AG+ + I+V
Sbjct: 12 VQAAYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGHCNTIDV 71
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L AD S SVADNGRGIP D+HP T KSALETVLTVLHAGGKFG S GY VSGGLHGVG
Sbjct: 72 CLRADGSCSVADNGRGIPTDVHPRTGKSALETVLTVLHAGGKFG--SGGYKVSGGLHGVG 129
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTV R + Q++ RG P+ +L K R GT + F PD ++
Sbjct: 130 VSVVNALSEWVEVTVHRQDKVHRQRFERGAPIGSLASEA---GEKGRTGTSVCFKPDIEI 186
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE--DSDPEKNQYNE--YFFAGGLEEYVQ 308
FT I FD+ T++GR+RELA+LN + I R E ++ E Q +E YF+ GG+ EYV
Sbjct: 187 FTGGISFDYATLSGRLRELAYLNGGVKIVFRDERPEAAGEDGQPHEEIYFYEGGIREYVN 246
Query: 309 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
++N +K PLH D++ + DG+ ++ ALQWC DAYSD++LG+AN+IRT+DGGTHIEG+K
Sbjct: 247 YMNAEKDPLHPDIIYVNSEKDGVQVEAALQWCVDAYSDSILGFANNIRTVDGGTHIEGLK 306
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
LTRTLN+ +K KD D +L+GE++REGLT ++SV+VP+PEFEGQTKT+LGN EVR
Sbjct: 307 TVLTRTLNTFARKRGKRKDSDGNLAGENIREGLTAVLSVKVPDPEFEGQTKTKLGNTEVR 366
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
+VD V E L+EYLE HP V+D IL K++ A AA AA+RAR+LVR+KSVL SS+LPGK
Sbjct: 367 GIVDTVVGEALSEYLEFHPQVIDLILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGK 426
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LADCSS P ESEI+IVEGDSAGGSAKQGRDRR Q I+ PL+ I
Sbjct: 427 LADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRNQAIL-PLRGKIL 471
>gi|390438149|ref|ZP_10226642.1| DNA gyrase subunit B, chloroplastic/mitochondrial [Microcystis sp.
T1-4]
gi|389838422|emb|CCI30766.1| DNA gyrase subunit B, chloroplastic/mitochondrial [Microcystis sp.
T1-4]
Length = 640
Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust.
Identities = 281/462 (60%), Positives = 358/462 (77%), Gaps = 9/462 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IEV
Sbjct: 1 MTSNYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ AD SVSV D+GRGIP D+HP T KSALETVLT+LHAGGKFG S GY VSGGLHGVG
Sbjct: 61 DIKADGSVSVTDDGRGIPTDVHPTTGKSALETVLTILHAGGKFG--SGGYKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS ++VTVWRD + Q+Y RG PVT L V +++ GTR+ F PD ++
Sbjct: 119 ISVVNALSAWVDVTVWRDHKVHTQRYERGIPVTEL---VSSPSQEEKTGTRVNFLPDTEI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F+ I+FD++T++GR+RELA+LN + I D PE+ Y + GG++EYV ++
Sbjct: 176 FSQGIEFDYSTLSGRLRELAYLNAGVKITF--SDYRPEEPHIETYCYEGGIKEYVAYMCR 233
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K+ LH D++ + +GI I++A QWC DAYSD +LG+AN+IRTIDGGTH+EG+KA LT
Sbjct: 234 EKETLHKDIIYVSGEKNGINIEVAFQWCIDAYSDNILGFANNIRTIDGGTHLEGLKAVLT 293
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RTLN++ +K +K+ + +L+GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD
Sbjct: 294 RTLNNVARKRNKIKENEPNLAGENVREGLTAVISVKVPEPEFEGQTKTKLGNTEVRGIVD 353
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E L EYLE +P V D+I+ K++ A KAA AA+RARDLVR+KSVL SS LPGKLADC
Sbjct: 354 SLVGETLNEYLEQNPQVADTIIEKAVQAYKAAEAARRARDLVRRKSVLESSPLPGKLADC 413
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
S PE+SEI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 414 SERDPEKSEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 454
>gi|166367564|ref|YP_001659837.1| DNA gyrase subunit B [Microcystis aeruginosa NIES-843]
gi|422301910|ref|ZP_16389275.1| DNA gyrase subunit B, chloroplastic/mitochondrial [Microcystis
aeruginosa PCC 9806]
gi|425463513|ref|ZP_18842843.1| DNA gyrase subunit B, chloroplastic/mitochondrial [Microcystis
aeruginosa PCC 9809]
gi|166089937|dbj|BAG04645.1| DNA gyrase subunit B [Microcystis aeruginosa NIES-843]
gi|389788978|emb|CCI15027.1| DNA gyrase subunit B, chloroplastic/mitochondrial [Microcystis
aeruginosa PCC 9806]
gi|389831668|emb|CCI25386.1| DNA gyrase subunit B, chloroplastic/mitochondrial [Microcystis
aeruginosa PCC 9809]
Length = 640
Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust.
Identities = 281/462 (60%), Positives = 357/462 (77%), Gaps = 9/462 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IEV
Sbjct: 1 MTSNYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ AD SVSV D+GRGIP D+HP T KSALETVLT+LHAGGKFG S GY VSGGLHGVG
Sbjct: 61 DIKADGSVSVTDDGRGIPTDVHPTTGKSALETVLTILHAGGKFG--SGGYKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS ++VTVWRD + Q+Y RG PVT L V +++ GTR+ F PD ++
Sbjct: 119 ISVVNALSAWVDVTVWRDHKVHTQRYERGIPVTEL---VSSPSQEEKTGTRVNFLPDTEI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F+ I+FD++T++GR+RELA+LN + I D PE+ Y + GG++EYV ++
Sbjct: 176 FSQGIEFDYSTLSGRLRELAYLNAGVKITF--SDYRPEEPHIETYCYEGGIKEYVAYMCR 233
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K+ LH D++ + +GI I++A QWC DAYSD +LG+AN+IRTIDGGTH+EG+KA LT
Sbjct: 234 EKETLHKDIIYVSGEKNGINIEVAFQWCIDAYSDNILGFANNIRTIDGGTHLEGLKAVLT 293
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RTLN++ +K +K+ + +L+GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD
Sbjct: 294 RTLNNVARKRNKIKENEPNLAGENVREGLTAVISVKVPEPEFEGQTKTKLGNTEVRGIVD 353
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E L EYLE +P V D+I+ K++ A KAA AA+RARDLVR+KSVL SS LPGKLADC
Sbjct: 354 SLVGETLNEYLEQNPQVADTIIEKAVQAYKAAEAARRARDLVRRKSVLESSPLPGKLADC 413
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
S PE SEI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 414 SERDPERSEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 454
>gi|159028965|emb|CAO87426.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 640
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 280/462 (60%), Positives = 357/462 (77%), Gaps = 9/462 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IEV
Sbjct: 1 MTSNYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ AD SVSV D+GRGIP D+HP T KSALETVLT+LHAGGKFG S GY VSGGLHGVG
Sbjct: 61 DIKADGSVSVTDDGRGIPTDVHPTTGKSALETVLTILHAGGKFG--SGGYKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS ++VTVWRD + Q+Y RG PVT L V +++ GTR+ F PD ++
Sbjct: 119 ISVVNALSAWVDVTVWRDHKVHTQRYERGIPVTEL---VSSPSQEEKTGTRVNFLPDTEI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F+ I+FD++T++GR+RELA+LN + I D E+ Y + GG++EYV ++
Sbjct: 176 FSQGIEFDYSTLSGRLRELAYLNAGVKITF--SDYRAEEPHIETYCYEGGIKEYVAYMCR 233
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K+ LH D++ + +GI I++A QWC DAYSD +LG+AN+IRTIDGGTH+EG+KA LT
Sbjct: 234 EKETLHKDIIYVSGEKNGINIEVAFQWCIDAYSDNILGFANNIRTIDGGTHLEGLKAVLT 293
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RTLN++ +K +K+ + +L+GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD
Sbjct: 294 RTLNNVARKRNKIKENEPNLAGENVREGLTAVISVKVPEPEFEGQTKTKLGNTEVRGIVD 353
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E L EYLE +P V D+I+ K++ A KAA AA+RARDLVR+KSVL SS LPGKLADC
Sbjct: 354 SLVGETLNEYLEQNPQVADTIIEKAVQAYKAAEAARRARDLVRRKSVLESSPLPGKLADC 413
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
S PE+SEI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 414 SERDPEKSEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 454
>gi|88809918|ref|ZP_01125423.1| DNA topoisomerase IV subunit B [Synechococcus sp. WH 7805]
gi|88786108|gb|EAR17270.1| DNA topoisomerase IV subunit B [Synechococcus sp. WH 7805]
Length = 655
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 278/466 (59%), Positives = 353/466 (75%), Gaps = 8/466 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN+VDEA AG+ + I+V
Sbjct: 7 VQAAYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSVDEALAGHCTEIQV 66
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L D S + DNGRGIP D+HP T KSALETVLTVLHAGGKFG + GY VSGGLHGVG
Sbjct: 67 VLGEDGSACITDNGRGIPTDVHPRTGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVG 124
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE ++VTV R + Q++ RG P+ +L P + + R GT +RF PD ++
Sbjct: 125 VSVVNALSEWVDVTVRRQAQVHRQRFERGAPIGSLVSEPQPAEEEGRTGTSVRFKPDIEI 184
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDS---DPEKNQYNE-YFFAGGLEEYVQ 308
FT I FD+ T++ R+RELA+LN + I R E D E N + E YF+ GG++EYV
Sbjct: 185 FTVGIVFDYATLSARLRELAYLNGGVRIVFRDERENARDAEGNPHEEIYFYEGGIKEYVA 244
Query: 309 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
++N +K LH +++ + DG++++ ALQWC DAYSD++LG+AN+IRT+DGGTHIEG+K
Sbjct: 245 YMNAEKDALHPEIIYVNAEKDGVSVEAALQWCVDAYSDSILGFANNIRTVDGGTHIEGLK 304
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
LTRTLN+ KK K+ D +L+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR
Sbjct: 305 TVLTRTLNTFAKKRGKRKESDSNLAGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVR 364
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
+VD V E L++YLE +P V+D IL K++ A AA AA+RAR+LVR+KSVL SS+LPGK
Sbjct: 365 GIVDSLVGESLSQYLEFNPGVIDMILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGK 424
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 425 LADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 469
>gi|170077957|ref|YP_001734595.1| DNA gyrase subunit B [Synechococcus sp. PCC 7002]
gi|169885626|gb|ACA99339.1| DNA gyrase, B subunit [Synechococcus sp. PCC 7002]
Length = 640
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 276/462 (59%), Positives = 356/462 (77%), Gaps = 9/462 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ Y ++QIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN+VDEA AGY + I V
Sbjct: 1 MTSNYSAQQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSVDEALAGYCTEINV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ AD SV+V DNGRGIP+D+HP+T KSALETV+TVLHAGGKFG + GY VSGGLHGVG
Sbjct: 61 EINADGSVTVTDNGRGIPVDVHPSTGKSALETVMTVLHAGGKFG--AGGYKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTVWRD Y Q+Y RG P LT P + GT + F PD ++
Sbjct: 119 VSVVNALSEWVEVTVWRDETTYKQRYERGVPQGELTEAPAP---QHLSGTSVCFLPDAKI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FT FD+NT+AGR+RELA+LN + I D EK N YF+ GG++EYV ++N
Sbjct: 176 FTETTVFDYNTLAGRLRELAYLNAGVRIVFT--DHRSEKQASNTYFYEGGIKEYVAYMNR 233
Query: 313 DKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K PLH+ ++ + +G+ +++ALQWC+DAYSD +LG+AN+IRT+DGGTH+EG+K+ LT
Sbjct: 234 EKSPLHEEIIYVTGEKNGVQLEVALQWCTDAYSDNLLGFANNIRTVDGGTHLEGLKSVLT 293
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RT+N++ +K +KD D +L+GE++REGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD
Sbjct: 294 RTMNTVARKRNKLKDNDSNLAGENIREGLTAVISVKVPDPEFEGQTKTKLGNSEVRGIVD 353
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E LTEY E + +V+D+IL K++ A KAA AA+RAR+LVR+KSVL SS LPGKLADC
Sbjct: 354 SFVGEVLTEYFEFNLNVVDAILEKAIQAFKAAEAARRARELVRRKSVLESSLLPGKLADC 413
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
S P ++EI++VEGDSAGGSAKQGRDR FQ I+ PL+ I
Sbjct: 414 SERDPAKTEIYLVEGDSAGGSAKQGRDRAFQAIL-PLRGKIL 454
>gi|113954544|ref|YP_729329.1| DNA gyrase subunit B [Synechococcus sp. CC9311]
gi|113881895|gb|ABI46853.1| DNA gyrase, B subunit [Synechococcus sp. CC9311]
Length = 655
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 281/466 (60%), Positives = 352/466 (75%), Gaps = 8/466 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DNAVDEA AG+ + I V
Sbjct: 7 VQAAYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNAVDEALAGHCNEITV 66
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L D S V+DNGRGIP D+HP T KSALETVLTVLHAGGKFG + GY VSGGLHGVG
Sbjct: 67 VLGEDGSAFVSDNGRGIPTDVHPRTGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVG 124
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTV R G + Q++ RG + +L P + K GT + F PD Q+
Sbjct: 125 VSVVNALSEWVEVTVRRQGQVHRQRFERGAAIGSLASEPQPAEEKGLTGTSVCFKPDHQI 184
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDS---DPEKNQYNE-YFFAGGLEEYVQ 308
FT I+FD++T++ R+RELA+LN + I R E D E E YF+ GG++EYV
Sbjct: 185 FTVGIEFDYSTLSARLRELAYLNGGVRIVFRDERQAARDQEGKPREELYFYEGGIKEYVA 244
Query: 309 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
++N +K PLH +++ + DG++++ ALQWC DAYSD++LG+AN+IRT+DGGTHIEG+K
Sbjct: 245 YMNAEKDPLHPEIIYVNSEKDGVSVEAALQWCVDAYSDSILGFANNIRTVDGGTHIEGLK 304
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
LTRTLN+ KK K+ D +L+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR
Sbjct: 305 TVLTRTLNTFAKKRGKRKEADSNLAGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVR 364
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
+VD V E L++YLE +P V+D IL K++ A AA AA+RAR+LVR+KSVL SS+LPGK
Sbjct: 365 GIVDNLVGESLSQYLEFNPGVIDMILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGK 424
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 425 LADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 469
>gi|148238483|ref|YP_001223870.1| DNA gyrase subunit B [Synechococcus sp. WH 7803]
gi|147847022|emb|CAK22573.1| DNA gyrase subunit B [Synechococcus sp. WH 7803]
Length = 655
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 281/466 (60%), Positives = 352/466 (75%), Gaps = 8/466 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AG+ S I+V
Sbjct: 7 VQAAYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGHCSEIQV 66
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L D S SV DNGRGIP D+HP T KSALETVLTVLHAGGKFG + GY VSGGLHGVG
Sbjct: 67 VLGEDGSASVTDNGRGIPTDVHPRTGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVG 124
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTV R G + Q++ RG P+ +L P + R GT + F PD ++
Sbjct: 125 VSVVNALSEWVEVTVRRQGQVHRQRFERGAPIGSLASEPQPAEEDGRTGTSVCFKPDIEI 184
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDS---DPEKNQYNE-YFFAGGLEEYVQ 308
F+ I FD+ T++ R+RELA+LN + I R E D E N + E YF+ GG++EYV
Sbjct: 185 FSVGIVFDYATLSARLRELAYLNGGVRIVFRDERESARDAEGNPHEETYFYEGGIKEYVA 244
Query: 309 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
++N +K LH +++ + DG++++ ALQWC DAYSD++LG+AN+IRT+DGGTHIEG+K
Sbjct: 245 YMNAEKDALHPEIIYVNAEKDGVSVEAALQWCVDAYSDSILGFANNIRTVDGGTHIEGLK 304
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
LTRTLN+ +K K+ D +L+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR
Sbjct: 305 TVLTRTLNTFARKRGKRKEADSNLAGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVR 364
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
+VD V E L +YLE +P V+D IL K++ A AA AA+RAR+LVR+KSVL SS+LPGK
Sbjct: 365 GIVDSLVGEALGQYLEFNPGVIDMILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGK 424
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 425 LADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 469
>gi|352095354|ref|ZP_08956457.1| DNA gyrase, B subunit [Synechococcus sp. WH 8016]
gi|351679365|gb|EHA62507.1| DNA gyrase, B subunit [Synechococcus sp. WH 8016]
Length = 655
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 280/466 (60%), Positives = 352/466 (75%), Gaps = 8/466 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DNAVDEA AG+ + I V
Sbjct: 7 VQAAYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNAVDEALAGHCNEITV 66
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L D S V+DNGRGIP D+HP T KSALETVLTVLHAGGKFG + GY VSGGLHGVG
Sbjct: 67 VLGEDGSAFVSDNGRGIPTDVHPRTGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVG 124
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTV R G + Q++ RG + +L P + K GT + F PD ++
Sbjct: 125 VSVVNALSEWVEVTVRRQGQVHRQRFERGAAIGSLVSEPQPAEEKGVTGTSVCFKPDHEI 184
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDS---DPEKNQYNE-YFFAGGLEEYVQ 308
FT I+FD++T++ R+RELA+LN + I R E D E E YF+ GG++EYV
Sbjct: 185 FTVGIEFDYSTLSARLRELAYLNGGVRIVFRDERQAARDSEGQPREELYFYEGGIKEYVA 244
Query: 309 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
++N +K PLH +++ + DG++++ ALQWC DAYSD++LG+AN+IRT+DGGTHIEG+K
Sbjct: 245 YMNAEKDPLHPEIIYVNSEKDGVSVEAALQWCVDAYSDSILGFANNIRTVDGGTHIEGLK 304
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
LTRTLN+ KK KD D +L+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR
Sbjct: 305 TVLTRTLNTFAKKRGKRKDSDSNLAGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVR 364
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
+VD V E L++YLE +P V+D IL K++ A AA AA+RAR+LVR+KSVL SS+LPGK
Sbjct: 365 GIVDSLVGESLSQYLEFNPGVIDMILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGK 424
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LADCS+ P ESEI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 425 LADCSTRDPSESEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 469
>gi|159904302|ref|YP_001551646.1| DNA gyrase subunit B [Prochlorococcus marinus str. MIT 9211]
gi|159889478|gb|ABX09692.1| DNA gyrase, subunit B [Prochlorococcus marinus str. MIT 9211]
Length = 658
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 285/474 (60%), Positives = 354/474 (74%), Gaps = 8/474 (1%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
+E K N V YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA A
Sbjct: 2 SEDSKVNKVQADYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALA 61
Query: 125 GYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 184
G+ I V L D S S+ DNGRGIP D+HP T KSALETVLTVLHAGGKFG S GY V
Sbjct: 62 GHCDEIVVVLCNDGSASITDNGRGIPTDIHPRTGKSALETVLTVLHAGGKFG--SGGYKV 119
Query: 185 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 244
SGGLHGVG+SVVNALSE +EVTV R + Q++ RG PV LT P K GT +
Sbjct: 120 SGGLHGVGVSVVNALSEWVEVTVRRQNQTHVQRFERGVPVGGLTSKDQPSSQKGVTGTTV 179
Query: 245 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDP---EKNQYNE-YFFA 300
F PD Q+FT+ I+F++ T++ R+RELA+LN + I R E E + Y E YF+
Sbjct: 180 CFKPDNQIFTSGIEFEYATLSSRLRELAYLNGGVRIVFRDERKTSLTTEGDPYEEIYFYQ 239
Query: 301 GGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDG 359
GG++EYV ++N++K LH +++ + DG+ ++ ALQWC DAYSD++LG+AN+IRT+DG
Sbjct: 240 GGIKEYVSYINSEKDALHPEIIYVNSEKDGVQVEAALQWCVDAYSDSILGFANNIRTVDG 299
Query: 360 GTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKT 419
GTHIEG+K LTRTLNS +K KD D +L+GE++REGLT ++SV+VP PEFEGQTKT
Sbjct: 300 GTHIEGLKTVLTRTLNSFARKRGKRKDGDNNLAGENIREGLTVVLSVKVPEPEFEGQTKT 359
Query: 420 RLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVL 479
+LGN EVR +VD V E L++YLE +P V+D IL K++ A AA AA+RAR+LVR+KSVL
Sbjct: 360 KLGNTEVRGIVDSLVGESLSQYLEFNPSVIDLILEKAIQAFNAAEAARRARELVRRKSVL 419
Query: 480 RSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
SS+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR+FQ I+ PL+ I
Sbjct: 420 ESSTLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRKFQAIL-PLRGKIL 472
>gi|123967056|ref|YP_001012137.1| DNA gyrase subunit B [Prochlorococcus marinus str. MIT 9515]
gi|123201422|gb|ABM73030.1| DNA gyrase, subunit B [Prochlorococcus marinus str. MIT 9515]
Length = 655
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 276/473 (58%), Positives = 351/473 (74%), Gaps = 9/473 (1%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
+E + N +S YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA A
Sbjct: 2 SEEKRSNKISNDYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALA 61
Query: 125 GYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 184
G+ IE+ L D S S++DNGRGIP D+HP T KSALETVLTVLHAGGKFG S GY V
Sbjct: 62 GHCDQIEIVLKDDGSASISDNGRGIPTDIHPRTGKSALETVLTVLHAGGKFG--SGGYKV 119
Query: 185 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKD-RQGTR 243
SGGLHGVG+SVVNALSE + VTV+R+G E+ Q++ RG +T +K R+GT
Sbjct: 120 SGGLHGVGISVVNALSEWVNVTVFREGSEFTQRFERG--ITKGELKTQKQQNKSLRKGTI 177
Query: 244 IRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE--YFFAG 301
I F PD +FT I+FD+ ++ R+RELA+LN + I E + E Y + G
Sbjct: 178 ICFKPDTTIFTDGIEFDYALLSSRLRELAYLNGGVKIIFIDERQKLPDGSFKEEIYLYDG 237
Query: 302 GLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGG 360
G++EYVQ++N +K+ +H +++ D + ++ ALQWCSD YSD +LG+AN+IRTIDGG
Sbjct: 238 GIKEYVQYINKEKESIHSEIIYVDSQKDNVYVEAALQWCSDVYSDNILGFANNIRTIDGG 297
Query: 361 THIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTR 420
THIEG+K LTRT N++ KK K+ D +LSGE++REGLT ++SV+VP+PEFEGQTKT+
Sbjct: 298 THIEGLKTVLTRTFNAIAKKRGKRKEVDKNLSGENIREGLTVVLSVKVPDPEFEGQTKTK 357
Query: 421 LGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLR 480
LGN EVR +VD + E LT+Y+E +P+V D IL K++ + AA AAKRARDLVR+KSVL
Sbjct: 358 LGNTEVRGIVDSLIGESLTKYMEFNPNVFDLILEKAIQSFNAAEAAKRARDLVRRKSVLE 417
Query: 481 SSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
SS+LPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR+FQ I+ PL+ I
Sbjct: 418 SSTLPGKLADCSSRDPSGSEIYIVEGDSAGGSAKQGRDRKFQAIL-PLRGKIL 469
>gi|194476918|ref|YP_002049097.1| DNA topoisomerase IV subunit B [Paulinella chromatophora]
gi|171191925|gb|ACB42887.1| DNA topoisomerase IV subunit B [Paulinella chromatophora]
Length = 652
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 284/466 (60%), Positives = 355/466 (76%), Gaps = 11/466 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGL VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AG+ I V
Sbjct: 7 VQADYGAEQIQVLEGLAPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGHCDEILV 66
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+L D S +++DNGRGIP D+HP T KSALETVLTVLHAGGKFGG S Y VSGGLHGVG
Sbjct: 67 SLSEDGSATISDNGRGIPTDIHPHTGKSALETVLTVLHAGGKFGGDS--YKVSGGLHGVG 124
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE LEVTV+R +HQ++ RG P+ LT ++R GT + F PD ++
Sbjct: 125 VSVVNALSEWLEVTVYRKSQLHHQRFERGVPIGLLTAQP---GEENRTGTSLTFKPDTKI 181
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE--DSDPEKN-QYNE-YFFAGGLEEYVQ 308
FTT+I FD++T+AGR+RELA+LN + I+ R E S E Y E Y + GG++EYV
Sbjct: 182 FTTSITFDYSTLAGRLRELAYLNGGVRISFRDERISSGGENGIAYEEVYCYKGGIKEYVA 241
Query: 309 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
++N +K PLH +++ DG+ ++ ALQWC D YSD++LG+AN+IRT+DGGTHIEG+K
Sbjct: 242 YINKEKDPLHSEIIYVNSHKDGVQVEAALQWCVDTYSDSILGFANNIRTVDGGTHIEGLK 301
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
LTRTLNS KK KD D +L+GE++REGLT ++SV+VP+PEFEGQTKT+LGN EVR
Sbjct: 302 TVLTRTLNSFAKKRGKRKDSDNNLAGENIREGLTAVLSVKVPDPEFEGQTKTKLGNTEVR 361
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
+VD V E LT+YLE +P V++ IL K++ A AA AA+RAR+LVR+KS+L SS+LPGK
Sbjct: 362 GIVDSLVGEALTQYLEFNPSVIELILEKAIQAFNAAEAARRARELVRRKSILESSTLPGK 421
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 422 LADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 466
>gi|116074377|ref|ZP_01471639.1| DNA topoisomerase IV subunit B [Synechococcus sp. RS9916]
gi|116069682|gb|EAU75434.1| DNA topoisomerase IV subunit B [Synechococcus sp. RS9916]
Length = 655
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 282/466 (60%), Positives = 349/466 (74%), Gaps = 8/466 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AG+ S I+V
Sbjct: 7 VQAAYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGHCSEIQV 66
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L D S SV DNGRGIP D+HP T KSALETVLTVLHAGGKFG + GY VSGGLHGVG
Sbjct: 67 VLAEDGSASVTDNGRGIPTDVHPRTGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVG 124
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTV R G + Q++ RG + +L P + GT + F PD Q+
Sbjct: 125 VSVVNALSEWVEVTVRRQGKVHRQRFERGAAIGSLRSEEQPAEENGLTGTSVCFKPDIQI 184
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDS---DPEKNQYNE-YFFAGGLEEYVQ 308
FT I FD+ T+A R+RELA+LN + I R E PE + E YF+ GG++EYV
Sbjct: 185 FTGGIVFDYATLAARLRELAYLNGGVRIVFRDEREAARTPEGEPHEEIYFYEGGIKEYVA 244
Query: 309 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
++N +K LH D++ + DG+ ++ ALQWCSDAYSD++LG+AN+IRT+DGGTHIEG+K
Sbjct: 245 YMNKEKDALHPDIIYVNSEKDGVQVEAALQWCSDAYSDSILGFANNIRTVDGGTHIEGLK 304
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
LTRTLN+ KK K+ D +L+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR
Sbjct: 305 TVLTRTLNAFAKKLGKRKESDSNLAGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVR 364
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
+VD V E L+++LE +P V+ IL K++ A AA AA+RAR+LVR+KSVL SS+LPGK
Sbjct: 365 GIVDNLVGEALSQFLEFNPSVIGLILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGK 424
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 425 LADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 469
>gi|33862190|ref|NP_893751.1| DNA gyrase subunit B [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
gi|33634408|emb|CAE20093.1| DNA gyrase, subunit B [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 655
Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust.
Identities = 272/472 (57%), Positives = 348/472 (73%), Gaps = 7/472 (1%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
+E + N +S YG++QIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA A
Sbjct: 2 SEEKRSNKISNDYGADQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALA 61
Query: 125 GYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 184
G+ +IE+ L D S ++DNGRGIP D+HP T KSALETVLTVLHAGGKFG S GY V
Sbjct: 62 GHCDHIEIVLKEDGSALISDNGRGIPTDIHPRTGKSALETVLTVLHAGGKFG--SGGYKV 119
Query: 185 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 244
SGGLHGVG+SVVNALSE + VTV RDG E++Q++ +G L R+GT I
Sbjct: 120 SGGLHGVGISVVNALSEWVHVTVSRDGYEFNQRFEKGIAKGELKSQKQQ-KKPFRKGTTI 178
Query: 245 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE--YFFAGG 302
F PD +FT I+FD+ ++ R+RELA+LN + I R E + + E Y + GG
Sbjct: 179 CFKPDTSIFTDGIKFDYALLSSRLRELAYLNGGVKIIFRDERQNLSDGSFKEEIYLYDGG 238
Query: 303 LEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGT 361
++EYV+++N +K+ +H +V+ D + ++ ALQWCSD YSD +LG+AN+IRTIDGGT
Sbjct: 239 IKEYVEYINKEKESIHSEVIYVDSQKDNVYVEAALQWCSDVYSDNILGFANNIRTIDGGT 298
Query: 362 HIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 421
HI+G+K LTRT N++ KK K+ D +LSGE++REGLT ++SV+VP PEFEGQTKT+L
Sbjct: 299 HIDGLKTVLTRTFNAIAKKRGKRKEVDKNLSGENIREGLTVVLSVKVPEPEFEGQTKTKL 358
Query: 422 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 481
GN EVR +VD + E L +Y+E +P+V D IL K++ + AA AAKRARDLVR+KSVL S
Sbjct: 359 GNTEVRGIVDSLIGESLIKYMEFNPNVFDLILEKAIQSFNAAEAAKRARDLVRRKSVLES 418
Query: 482 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
S+LPGKLADCSS P +EI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 419 STLPGKLADCSSRDPSGAEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 469
>gi|424513000|emb|CCO66584.1| DNA gyrase subunit B [Bathycoccus prasinos]
Length = 811
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 282/532 (53%), Positives = 370/532 (69%), Gaps = 28/532 (5%)
Query: 15 VLMASRCFCSFSS------SLFF----KPRTNFAIRGVSSQVLTRSNVVLPRAFLSSSIA 64
V MA+R S +S + FF +P+ ++ S LT++ A + S +
Sbjct: 110 VAMAARQHSSDTSRSRSPTTTFFSKQHQPQRRLSLTSSCSSPLTKT------ATRAISTS 163
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
+E+ ++ Y S IQVLEGLE VRKRP MYIG+T +GLHHLV+EILDN VDE QA
Sbjct: 164 SESMQD------YDSSSIQVLEGLEPVRKRPGMYIGNTSTKGLHHLVWEILDNGVDEIQA 217
Query: 125 GYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 184
+ASN+++ L V V DNGRGIP+++HP T KS+LETVLT+LHAGGKFGG+ SGYSV
Sbjct: 218 NHASNVQLTLEKTGHVVVTDNGRGIPVEIHPKTGKSSLETVLTILHAGGKFGGAESGYSV 277
Query: 185 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKD---RQG 241
SGGLHGVG+SVVNALSE LEVTVWR EY Q +SRGK TT V +KD + G
Sbjct: 278 SGGLHGVGVSVVNALSEELEVTVWRGDKEYFQTFSRGK--TTSELQVSERKAKDGNPKTG 335
Query: 242 TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG 301
TR+RF PD +F +FD N I R++ELAFLN + DS ++ + + +
Sbjct: 336 TRVRFKPDNMIFQKVQEFDPNIIRARMKELAFLNSNAELRFTSVDSKTKEMKEDVLKYPN 395
Query: 302 GLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGT 361
GL +Y+ LN+DK +H+ + + + +G+ ++L LQW D YSDT+LGYANSIRTIDGG+
Sbjct: 396 GLTDYIVDLNSDKNAIHEPITLKTEHEGVKVELCLQWTHDDYSDTILGYANSIRTIDGGS 455
Query: 362 HIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 421
HI+G+K SLTR N+ +K+K +K +D +L G+H+REGL+ +I+V VP PEFEGQTKTRL
Sbjct: 456 HIDGLKFSLTRAFNTAARKAKLLKAEDTNLGGDHIREGLSAVIAVWVPQPEFEGQTKTRL 515
Query: 422 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 481
GN E RK V+ + E TEYLE HP+VL S+ K+ +ALKA+ AAKRARDLVR+KSVLRS
Sbjct: 516 GNSEARKAVEAMISEKFTEYLEFHPEVLSSVFKKAQAALKASEAAKRARDLVRRKSVLRS 575
Query: 482 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
SSLPGKL+DC+++ +E+EIF+VEGDSAGGS KQGRDR FQ ++ PL+ I
Sbjct: 576 SSLPGKLSDCANSNADETEIFLVEGDSAGGSCKQGRDRAFQAVL-PLRGKIL 626
>gi|318042881|ref|ZP_07974837.1| DNA gyrase subunit B [Synechococcus sp. CB0101]
Length = 653
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 281/466 (60%), Positives = 348/466 (74%), Gaps = 10/466 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AG+ I V
Sbjct: 7 VQAAYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGHCDQILV 66
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L D S +V DNGRGIP D+HP T KSALETVLTVLHAGGKFG + GY VSGGLHGVG
Sbjct: 67 VLNEDGSCAVTDNGRGIPTDVHPRTGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVG 124
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTV R G E+ Q++ RG P+ +L P R GT + F PD ++
Sbjct: 125 VSVVNALSEWVEVTVHRQGQEHLQRFERGAPIGSLASK--PAADPSRTGTSVCFKPDIEI 182
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKED---SDPEKNQYNE-YFFAGGLEEYVQ 308
FT I+FD++T++ R+RELA+LN + I R E + E + E Y + GG++EYV
Sbjct: 183 FTGGIEFDYHTLSARLRELAYLNGGVRIVFRDERPAARNAEGAAHEEIYHYEGGIKEYVA 242
Query: 309 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
++N +K LH D++ + DG+ ++ ALQWC DAYSD + G+AN+IRT+DGGTHIEG+K
Sbjct: 243 YMNAEKDALHPDIIYVNSEKDGVQVEAALQWCVDAYSDNIFGFANNIRTVDGGTHIEGLK 302
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
LTRTLN+ KK KD D +L+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR
Sbjct: 303 TVLTRTLNAFAKKRGKRKDADANLAGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVR 362
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
+VD V E L+EYLE +P V+D IL K++ A AA AA+RAR+LVR+KSVL SS+LPGK
Sbjct: 363 GIVDSLVGEALSEYLEFNPSVIDLILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGK 422
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 423 LADCSSRDPGESEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 467
>gi|427703473|ref|YP_007046695.1| DNA gyrase subunit B [Cyanobium gracile PCC 6307]
gi|427346641|gb|AFY29354.1| DNA gyrase, B subunit [Cyanobium gracile PCC 6307]
Length = 652
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 279/466 (59%), Positives = 347/466 (74%), Gaps = 11/466 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN+VDEA AG+ I V
Sbjct: 7 VEAAYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSVDEALAGHCDEILV 66
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L D S SV DNGRGIP D+HP T +SALETVLTVLHAGGKFG S GY VSGGLHGVG
Sbjct: 67 TLHGDGSASVTDNGRGIPTDIHPRTGRSALETVLTVLHAGGKFG--SGGYKVSGGLHGVG 124
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTV R G + Q++ RG P+ TL P GT +RF PD ++
Sbjct: 125 ISVVNALSEWVEVTVHRQGQVHRQRFERGLPIGTLASEDAP---DAHTGTSVRFRPDIEI 181
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE----YFFAGGLEEYVQ 308
F+ I+FD++T++ R+RELA+LN + I R E + Y + GG++EYV
Sbjct: 182 FSGGIEFDYHTLSARLRELAYLNGGVRIVFRDERAAAAGADGAAHEEIYHYEGGIKEYVA 241
Query: 309 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
++N +K PLH +++ DG+ ++ ALQWC DAYSD++LG+AN+IRT+DGGTHIEG+K
Sbjct: 242 YMNAEKDPLHPEIIYVNATKDGVQVEAALQWCVDAYSDSILGFANNIRTVDGGTHIEGLK 301
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
LTRTLN+ KK KD D +L+GE++REGLT ++SV+VP+PEFEGQTKT+LGN EVR
Sbjct: 302 TVLTRTLNTFAKKRGKRKDADANLAGENIREGLTAVLSVKVPDPEFEGQTKTKLGNTEVR 361
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
+VD +V E L EYLE +P V+D IL K++ A AA AA+RAR+LVR+KSVL SS+LPGK
Sbjct: 362 GIVDTTVGEALGEYLEFNPQVIDLILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGK 421
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 422 LADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 466
>gi|87301672|ref|ZP_01084512.1| DNA topoisomerase IV subunit B [Synechococcus sp. WH 5701]
gi|87283889|gb|EAQ75843.1| DNA topoisomerase IV subunit B [Synechococcus sp. WH 5701]
Length = 652
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 280/469 (59%), Positives = 346/469 (73%), Gaps = 17/469 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN+VDEA AG+ I V
Sbjct: 7 IQHAYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSVDEALAGHCDEILV 66
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L D S + DNGRGIP D+HP T KSALETVLTVLHAGGKFG S GY VSGGLHGVG
Sbjct: 67 RLCEDGSAEITDNGRGIPTDIHPRTGKSALETVLTVLHAGGKFG--SGGYKVSGGLHGVG 124
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTV R G + Q++ RG P+ +L P + GT +RF PD ++
Sbjct: 125 ISVVNALSEWVEVTVRRQGQVHRQRFERGTPIGSLRSEDDPSGAT---GTAVRFKPDIEI 181
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE-------DSDPEKNQYNEYFFAGGLEE 305
F+ I FD+ T++GR+RELA+LN + I R E D P + Y+ + GG+ E
Sbjct: 182 FSGGIDFDYATLSGRLRELAYLNGGVRIVFRDEREAAKGSDGSPHEEIYH---YEGGIRE 238
Query: 306 YVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 364
YV ++N K PLH D++ DG+ ++ ALQWC DAYSD++LG+AN+IRT+DGGTHIE
Sbjct: 239 YVTYMNAGKDPLHPDIIYVNASKDGVQVEAALQWCVDAYSDSILGFANNIRTVDGGTHIE 298
Query: 365 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 424
G+K LTRTLN+ KK KD D +L+GE++REGLT ++SV+VP+PEFEGQTKT+LGN
Sbjct: 299 GLKTVLTRTLNTFAKKRGKRKDTDSNLAGENIREGLTAVLSVKVPDPEFEGQTKTKLGNT 358
Query: 425 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 484
EVR +VD V E L E+LE HP V+D IL K++ A AA AA+RAR+LVR+KSVL SS+L
Sbjct: 359 EVRGIVDSVVGEALGEFLEFHPQVIDLILEKAIQAFNAAEAARRARELVRRKSVLESSTL 418
Query: 485 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
PGKLADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 419 PGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 466
>gi|124021870|ref|YP_001016177.1| DNA gyrase subunit B [Prochlorococcus marinus str. MIT 9303]
gi|123962156|gb|ABM76912.1| DNA gyrase, subunit B [Prochlorococcus marinus str. MIT 9303]
Length = 655
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 278/470 (59%), Positives = 352/470 (74%), Gaps = 8/470 (1%)
Query: 69 KENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
+++ V YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLV+E++DN+VDEA AG+
Sbjct: 3 EDSKVQAAYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVFEVVDNSVDEALAGHCD 62
Query: 129 NIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 188
I V L D S S+ADNGRGIP D+H T KSALETVLTVLHAGGKFG S GY VSGGL
Sbjct: 63 EILVVLGPDGSASIADNGRGIPTDVHSRTGKSALETVLTVLHAGGKFG--SGGYKVSGGL 120
Query: 189 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 248
HGVG+SVVNALSE +EVTV R G + Q++ RG + +L P K R GT + F P
Sbjct: 121 HGVGVSVVNALSEWVEVTVRRQGQVHRQRFERGTAIGSLRSEAQPASEKGRTGTSVCFKP 180
Query: 249 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDS---DPEKNQYNE-YFFAGGLE 304
D+++FT I FD+ T++ R+RELA+LN + I R E D E + E YF+ GG++
Sbjct: 181 DEEIFTVGIVFDYATLSARLRELAYLNGGVRIVFRDERQPVLDAEGAPHEEVYFYEGGIK 240
Query: 305 EYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
EYV ++N +K LH +++ + D + ++ ALQWC DAYSD++LG+AN+IRT+DGGTHI
Sbjct: 241 EYVTYMNAEKDALHPEIIYVNSEKDNVQVEAALQWCVDAYSDSILGFANNIRTVDGGTHI 300
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
EG+K LTRTLN+ +K K+ D +L+GE++REGLT ++SV+VP+PEFEGQTKT+LGN
Sbjct: 301 EGLKTVLTRTLNTFARKRGKRKEADSNLAGENIREGLTAVLSVKVPDPEFEGQTKTKLGN 360
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
EVR +VD V E L++YLE +P V+D IL K++ A AA AA+RAR+LVR+KSVL SS+
Sbjct: 361 TEVRGIVDSLVGEALSQYLEFNPAVIDLILEKAIQAFNAAEAARRARELVRRKSVLESST 420
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 421 LPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 469
>gi|78183717|ref|YP_376151.1| DNA gyrase subunit B [Synechococcus sp. CC9902]
gi|78168011|gb|ABB25108.1| DNA gyrase subunit B [Synechococcus sp. CC9902]
Length = 655
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 279/466 (59%), Positives = 345/466 (74%), Gaps = 8/466 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DNAVDEA AG+ I V
Sbjct: 7 VQNEYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNAVDEALAGHCDRITV 66
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L AD S SV DNGRGIP D+HP T KSALETVLTVLHAGGKFG + GY VSGGLHGVG
Sbjct: 67 ILGADGSASVTDNGRGIPTDVHPRTGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVG 124
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE ++VTV R G + Q++ RG + TL P + GT + F PD Q+
Sbjct: 125 VSVVNALSEWVQVTVRRQGQVHRQRFERGAAIGTLLSESQPEAEQGETGTTVCFLPDTQI 184
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKED----SDPEKNQYNEYFFAGGLEEYVQ 308
FT I FD+ T++ R+RELA+LN + I R E SD YF+ GG++EYV
Sbjct: 185 FTGGIVFDYATLSARLRELAYLNGGVQIVFRDERESSLSDAGDPHEEIYFYEGGIKEYVA 244
Query: 309 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
++N K LH D++ + DG+ ++ ALQWC+DAYSD++LG+AN+IRT+DGGTHIEG+K
Sbjct: 245 YMNKAKDALHPDIIYVNSEKDGVQVEAALQWCADAYSDSILGFANNIRTVDGGTHIEGLK 304
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
LTRTLN+ KK K+ D +L+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR
Sbjct: 305 TVLTRTLNAFAKKLGKRKEADSNLAGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVR 364
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
+VD V E L+++LE +P V+ IL K++ A AA AA+RAR+LVR+KSVL SS+LPGK
Sbjct: 365 GIVDNLVGESLSQFLEFNPSVISLILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGK 424
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 425 LADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 469
>gi|22298189|ref|NP_681436.1| DNA gyrase subunit B [Thermosynechococcus elongatus BP-1]
gi|22294368|dbj|BAC08198.1| DNA gyrase subunit B [Thermosynechococcus elongatus BP-1]
Length = 640
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 274/462 (59%), Positives = 355/462 (76%), Gaps = 9/462 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ Y S Q++VL+GLE VR RP MYIGSTGP+GLHHLVYE++DN+VDEA AGY S I V
Sbjct: 1 MTAEYSSAQLRVLKGLEPVRTRPGMYIGSTGPKGLHHLVYEVVDNSVDEALAGYCSTILV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ AD SV+V D+GRGIP D+HP T S +ETV+TVLHAGGKFG GY VSGGLHGVG
Sbjct: 61 QINADGSVTVTDDGRGIPTDIHPDTGVSGVETVMTVLHAGGKFG--DGGYKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE LEVTVWR+G +HQ+Y RG P T L P D+++R+GT + F+PD+Q+
Sbjct: 119 VSVVNALSEWLEVTVWRNGFVHHQRYERGVPTTPL--EKTP-DTEERRGTSVTFFPDRQI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FT I+FD + R+RELA+LN + I + P ++ Y + GG+ EYV+++
Sbjct: 176 FTETIEFDAKVLMTRLRELAYLNAGIRIEFKDLRVTPPLSE--TYCYEGGIREYVRYMVQ 233
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K+PLH +++ + + D + ++ ALQWC+DAYS+ +LG+AN+IRTIDGGTH+EG+KA LT
Sbjct: 234 EKEPLHPEIIYIQGEKDDVQVEAALQWCADAYSENLLGFANNIRTIDGGTHMEGLKAVLT 293
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RTLN+LG+K +K+ + +L+GE++REGLT IISV+VPNPEFEGQTKT+LGN EVR +VD
Sbjct: 294 RTLNALGRKRNKLKENNANLAGENIREGLTAIISVKVPNPEFEGQTKTKLGNTEVRGIVD 353
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V LTEYL+ HP+V D+IL K++ A AA AA+RAR++VR+KSVL SS+LPGKLADC
Sbjct: 354 AIVGAALTEYLDFHPNVTDTILEKAIQAFNAAEAARRAREMVRRKSVLESSTLPGKLADC 413
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
SS P SEIFIVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 414 SSRDPAVSEIFIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 454
>gi|78211642|ref|YP_380421.1| DNA gyrase subunit B [Synechococcus sp. CC9605]
gi|78196101|gb|ABB33866.1| DNA gyrase, B subunit [Synechococcus sp. CC9605]
Length = 655
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 279/466 (59%), Positives = 347/466 (74%), Gaps = 8/466 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AG+ I V
Sbjct: 7 VQNAYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGHCDRIVV 66
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L D S SV+DNGRGIP D+HP T KSALETVLTVLHAGGKFG + GY VSGGLHGVG
Sbjct: 67 VLGEDGSASVSDNGRGIPTDVHPRTGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVG 124
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE ++VTV R G + Q++ RG + L P GT + F PD ++
Sbjct: 125 VSVVNALSEWVQVTVRRQGQVHRQRFERGAAIGVLASESQPAAESGETGTTVCFKPDLEI 184
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDS---DPEKNQYNE-YFFAGGLEEYVQ 308
FT I FD+ T++ R+RELA+LN + I R E D E N + E YF+ GG++EYV
Sbjct: 185 FTGGIVFDYATLSARLRELAYLNGGVRIVFRDERESARDGEGNPHEETYFYEGGIKEYVA 244
Query: 309 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
++N +K LH D++ + DG+ ++ ALQWCSDAYSD++LG+AN+IRT+DGGTHIEG+K
Sbjct: 245 YMNKEKDALHPDIIYVNSEKDGVQVEAALQWCSDAYSDSILGFANNIRTVDGGTHIEGLK 304
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
LTRTLN+ KK K+ D +L+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR
Sbjct: 305 TVLTRTLNAFAKKLGKRKESDSNLAGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVR 364
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
+VD V E L+++LE +P V+ IL K++ A AA AA+RAR+LVR+KSVL SS+LPGK
Sbjct: 365 GIVDNLVGEALSQFLEFNPSVIGLILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGK 424
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 425 LADCSSRDPGESEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 469
>gi|33862394|ref|NP_893954.1| DNA gyrase subunit B [Prochlorococcus marinus str. MIT 9313]
gi|33640507|emb|CAE20296.1| DNA gyrase, subunit B [Prochlorococcus marinus str. MIT 9313]
Length = 655
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 277/470 (58%), Positives = 352/470 (74%), Gaps = 8/470 (1%)
Query: 69 KENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
+++ V YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLV+E++DN+VDEA AG+
Sbjct: 3 EDSKVQAAYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVFEVVDNSVDEALAGHCD 62
Query: 129 NIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 188
I V L D S S++DNGRGIP D+H T KSALETVLTVLHAGGKFG S GY VSGGL
Sbjct: 63 EILVVLGPDGSASISDNGRGIPTDVHSRTGKSALETVLTVLHAGGKFG--SGGYKVSGGL 120
Query: 189 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 248
HGVG+SVVNALSE +EVTV R G + Q++ RG + +L P K R GT + F P
Sbjct: 121 HGVGVSVVNALSEWVEVTVRRQGQVHRQRFERGTAIGSLRSEAQPASEKGRTGTSVCFKP 180
Query: 249 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDS---DPEKNQYNE-YFFAGGLE 304
D+++FT I FD+ T++ R+RELA+LN + I R E D E + E YF+ GG++
Sbjct: 181 DEEIFTVGIVFDYATLSTRLRELAYLNGGVRIVFRDERQPVLDAEGAPHEEVYFYEGGIK 240
Query: 305 EYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
EYV ++N +K LH +++ + D + ++ ALQWC DAYSD++LG+AN+IRT+DGGTHI
Sbjct: 241 EYVTYMNAEKDALHPEIIYVNSEKDNVQVEAALQWCVDAYSDSILGFANNIRTVDGGTHI 300
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
EG+K LTRTLN+ +K K+ D +L+GE++REGLT ++SV+VP+PEFEGQTKT+LGN
Sbjct: 301 EGLKTVLTRTLNTFARKRGKRKEADSNLAGENIREGLTAVLSVKVPDPEFEGQTKTKLGN 360
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
EVR +VD V E L++YLE +P V+D IL K++ A AA AA+RAR+LVR+KSVL SS+
Sbjct: 361 TEVRGIVDSLVGEALSQYLEFNPAVIDLILEKAIQAFNAAEAARRARELVRRKSVLESST 420
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 421 LPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 469
>gi|72383051|ref|YP_292406.1| DNA gyrase subunit B [Prochlorococcus marinus str. NATL2A]
gi|72002901|gb|AAZ58703.1| DNA gyrase subunit B [Prochlorococcus marinus str. NATL2A]
Length = 655
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 278/470 (59%), Positives = 350/470 (74%), Gaps = 8/470 (1%)
Query: 69 KENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
K++ V YG+EQIQVLEGLE VRKRP MYIGSTG +GLHHLVYE++DNAVDEA AG+
Sbjct: 3 KDSKVQAAYGAEQIQVLEGLEPVRKRPGMYIGSTGSKGLHHLVYEVVDNAVDEALAGHCD 62
Query: 129 NIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 188
I + L D S SV+DNGRGIP DLHP T KSALETVLTVLHAGGKFG S GY VSGGL
Sbjct: 63 QITILLCEDGSASVSDNGRGIPTDLHPRTGKSALETVLTVLHAGGKFG--SGGYKVSGGL 120
Query: 189 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 248
HGVG+SVVNALSE +EVTV R + Q++ RG + +L L K+ GT + F P
Sbjct: 121 HGVGISVVNALSEWVEVTVRRQQQVHFQRFERGASIGSLKSENLSKSDKNLTGTTVCFKP 180
Query: 249 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR---KEDSDPEKNQYNE-YFFAGGLE 304
D Q+FT I F++ ++ R+RELA+LN + I R K+ +D + Y E YF+ GG++
Sbjct: 181 DDQIFTDGISFEYGILSSRLRELAYLNGGVRIVFRDERKQSNDSSQTPYEEVYFYEGGIK 240
Query: 305 EYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
EYV+++ K LH +++ + DG+ ++ A+QWC DAYSD++LG+AN+IRTIDGGTHI
Sbjct: 241 EYVEYMTKAKDSLHPEIIYVNSEKDGVQVEAAMQWCVDAYSDSILGFANNIRTIDGGTHI 300
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
EG+K LTRTLNS KK KD D +L+GE++REGLT ++SV+VP+PEFEGQTKT+LGN
Sbjct: 301 EGLKTVLTRTLNSFAKKRGKRKDGDSNLAGENIREGLTAVLSVKVPDPEFEGQTKTKLGN 360
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
EVR +VD V L++YLE +P V+D IL K++ A AA AA+RAR+LVR+KSVL SS+
Sbjct: 361 TEVRGIVDSLVGTALSQYLEFNPGVIDLILEKAIQAFNAAEAARRARELVRRKSVLESST 420
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR+FQ I+ PL+ I
Sbjct: 421 LPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRKFQAIL-PLRGKIL 469
>gi|33864631|ref|NP_896190.1| DNA gyrase subunit B [Synechococcus sp. WH 8102]
gi|33632154|emb|CAE06610.1| DNA gyrase subunit B [Synechococcus sp. WH 8102]
Length = 655
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 276/467 (59%), Positives = 349/467 (74%), Gaps = 10/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN+VDEA AG+ I V
Sbjct: 7 VQNAYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSVDEALAGHCDRILV 66
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L D S S++DNGRGIP D+HP T KSALETVLTVLHAGGKFG + GY VSGGLHGVG
Sbjct: 67 TLGEDGSASISDNGRGIPTDVHPRTGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVG 124
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE ++VTV R G + Q++ RG + +L P GT + F PD ++
Sbjct: 125 VSVVNALSEWVQVTVRRQGQVHRQRFERGAAIGSLASEDQPASEAGETGTTVCFKPDIEI 184
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE-----YFFAGGLEEYV 307
FT I FD+ T++ R+RELA+LN + I R E + +N+ E YF+ GG++EYV
Sbjct: 185 FTGGIVFDYATLSARLRELAYLNGGVRIVFRDE-RESARNEVGEAHEETYFYEGGIKEYV 243
Query: 308 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 366
++NT+K LH D++ + DG+ ++ ALQWCSDAYSD++LG+AN+IRT+DGGTHIEG+
Sbjct: 244 AYMNTEKDALHPDIIYVNSEKDGVQVEAALQWCSDAYSDSILGFANNIRTVDGGTHIEGL 303
Query: 367 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 426
K LTRTLN+ KK K+ D +L+GE++REGLT ++SV+VP PEFEGQTKT+LGN EV
Sbjct: 304 KTVLTRTLNAFAKKLGKRKESDSNLAGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEV 363
Query: 427 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 486
R +VD V E L+++LE +P V+ IL K++ A AA AA+RAR+LVR+KSVL SS+LPG
Sbjct: 364 RGIVDNLVGEGLSQFLEFNPSVIGLILEKAIQAFNAAEAARRARELVRRKSVLESSTLPG 423
Query: 487 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
KLADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 424 KLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 469
>gi|124026793|ref|YP_001015908.1| DNA gyrase subunit B [Prochlorococcus marinus str. NATL1A]
gi|123961861|gb|ABM76644.1| DNA gyrase, subunit B [Prochlorococcus marinus str. NATL1A]
Length = 655
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 277/470 (58%), Positives = 352/470 (74%), Gaps = 8/470 (1%)
Query: 69 KENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
K++ V + YG+EQIQVLEGLE VRKRP MYIGSTG +GLHHLVYE++DNAVDEA AG+
Sbjct: 3 KDSKVQEAYGAEQIQVLEGLEPVRKRPGMYIGSTGSKGLHHLVYEVVDNAVDEALAGHCD 62
Query: 129 NIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 188
I + L D S SV+DNGRGIP DLHP T KSALETVLTVLHAGGKFG S GY VSGGL
Sbjct: 63 QITILLCEDGSASVSDNGRGIPTDLHPRTGKSALETVLTVLHAGGKFG--SGGYKVSGGL 120
Query: 189 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 248
HGVG+SVVNALSE +EVTV R + Q++ RG + +L L K+ GT + F P
Sbjct: 121 HGVGISVVNALSEWVEVTVRRQQQVHFQRFERGASIGSLKSENLSKSDKNLTGTTVCFKP 180
Query: 249 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR---KEDSDPEKNQYNE-YFFAGGLE 304
D Q+FT I F++ ++ R+RELA+LN + I R K+ +D + + E YF+ GG++
Sbjct: 181 DDQIFTDGISFEYGILSSRLRELAYLNGGVRIVFRDERKQSNDSSQTPHEEVYFYEGGIK 240
Query: 305 EYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
EYV+++ K LH +++ + DG+ ++ A+QWC DAYSD++LG+AN+IRTIDGGTHI
Sbjct: 241 EYVEYMTKAKDSLHPEIIYVNSEKDGVQVEAAMQWCVDAYSDSILGFANNIRTIDGGTHI 300
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
EG+K LTRTLNS KK KD D +L+GE++REGLT ++SV+VP+PEFEGQTKT+LGN
Sbjct: 301 EGLKTVLTRTLNSFAKKRGKRKDGDSNLAGENIREGLTAVLSVKVPDPEFEGQTKTKLGN 360
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
EVR +VD V L++YLE +P+V+D IL K++ A AA AA+RAR+LVR+KSVL SS+
Sbjct: 361 TEVRGIVDSLVGTSLSQYLEFNPNVIDLILEKAIQAFNAAEAARRARELVRRKSVLESST 420
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR+FQ I+ PL+ I
Sbjct: 421 LPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRKFQAIL-PLRGKIL 469
>gi|254430578|ref|ZP_05044281.1| DNA gyrase, B subunit [Cyanobium sp. PCC 7001]
gi|197625031|gb|EDY37590.1| DNA gyrase, B subunit [Cyanobium sp. PCC 7001]
Length = 652
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 280/467 (59%), Positives = 347/467 (74%), Gaps = 13/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DNAVDEA AG+ I V
Sbjct: 7 VQAAYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNAVDEALAGHCDQILV 66
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L D S +V+DNGRGIP D+HP T KSALETVLTVLHAGGKFG S GY VSGGLHGVG
Sbjct: 67 VLNEDGSCAVSDNGRGIPTDIHPRTGKSALETVLTVLHAGGKFG--SGGYKVSGGLHGVG 124
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE ++VTV+R + Q++ RG + +L K R GT + F PD ++
Sbjct: 125 VSVVNALSEWVQVTVYRHDQVHTQRFERGAAIGSLAS---APGEKGRTGTTVCFKPDSEI 181
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE-----YFFAGGLEEYV 307
FT I FD+ T++ R+RELA+LN + I R E +N E YF+ GG++EYV
Sbjct: 182 FTGGISFDYATLSSRLRELAYLNGGVRIVFRDERQSA-RNAAGEPHEDIYFYEGGIKEYV 240
Query: 308 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 366
++N +K PLH D++ + +G+ ++ ALQWC DAYSD++LG+AN+IRT+DGGTHIEG+
Sbjct: 241 AYMNAEKDPLHPDIIYVNAEKEGVQVEAALQWCVDAYSDSILGFANNIRTVDGGTHIEGL 300
Query: 367 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 426
K LTRTLN+ KK KD D +L+GE++REGLT ++SV+VP PEFEGQTKT+LGN EV
Sbjct: 301 KTVLTRTLNAFAKKRGKRKDADANLAGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEV 360
Query: 427 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 486
R +VD V E L E+LE +P V+D IL K++ A AA AA+RAR+LVR+KSVL SS+LPG
Sbjct: 361 RGIVDTLVGEALGEFLEFNPSVIDLILEKAIQAFNAAEAARRARELVRRKSVLESSTLPG 420
Query: 487 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
KLADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 421 KLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 466
>gi|116071704|ref|ZP_01468972.1| DNA topoisomerase IV subunit B [Synechococcus sp. BL107]
gi|116065327|gb|EAU71085.1| DNA topoisomerase IV subunit B [Synechococcus sp. BL107]
Length = 655
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 278/466 (59%), Positives = 344/466 (73%), Gaps = 8/466 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DNAVDEA AG+ I V
Sbjct: 7 VQNEYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNAVDEALAGHCDRITV 66
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L AD S SV DNGRGIP D+HP T KSALETVLTVLHAGGKFG + GY VSGGLHGVG
Sbjct: 67 ILGADGSASVTDNGRGIPTDVHPRTGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVG 124
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE ++VTV R G + Q++ RG + +L + GT + F PD Q+
Sbjct: 125 VSVVNALSEWVQVTVRRQGQVHRQRFERGAAIGSLLSESQSEAEQGETGTTVCFLPDLQI 184
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKED----SDPEKNQYNEYFFAGGLEEYVQ 308
FT I FD+ T++ R+RELA+LN + I R E SD YF+ GG++EYV
Sbjct: 185 FTGGIVFDYATLSARLRELAYLNGGVQIVFRDEREASLSDAGDPHEEIYFYEGGIKEYVA 244
Query: 309 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
++N K LH D++ + DG+ ++ ALQWC+DAYSD++LG+AN+IRT+DGGTHIEG+K
Sbjct: 245 YMNKAKDALHPDIIYVNSEKDGVQVEAALQWCADAYSDSILGFANNIRTVDGGTHIEGLK 304
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
LTRTLN+ KK KD D +L+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR
Sbjct: 305 TVLTRTLNAFAKKLGKRKDADSNLAGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVR 364
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
+VD V E L+++LE +P V+ IL K++ A AA AA+RAR+LVR+KSVL SS+LPGK
Sbjct: 365 GIVDNLVGEALSQFLEFNPSVISLILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGK 424
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 425 LADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 469
>gi|427723858|ref|YP_007071135.1| DNA gyrase subunit B [Leptolyngbya sp. PCC 7376]
gi|427355578|gb|AFY38301.1| DNA gyrase subunit B [Leptolyngbya sp. PCC 7376]
Length = 640
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 272/462 (58%), Positives = 348/462 (75%), Gaps = 9/462 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+S YG++QIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN+VDEA AGY I V
Sbjct: 1 MSSNYGAQQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSVDEALAGYCDEINV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+L D SV V DNGRGIP D+HP T KSALETV+TVLHAGGKFG GY VSGGLHGVG
Sbjct: 61 EILEDGSVRVTDNGRGIPTDIHPTTGKSALETVMTVLHAGGKFG--DGGYKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTVWR+ E+ Q+Y RG L V + + GT + F PD ++
Sbjct: 119 VSVVNALSEWVEVTVWRNETEHKQRYERGIAKGDL---VTAPATGHKSGTSVHFLPDAEI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FT FD+NT+AGR+RELA+LN + I D E+ + N YF+ GG++EYV ++N
Sbjct: 176 FTETTVFDYNTLAGRLRELAYLNASVKIIFT--DHRAEEPRSNTYFYEGGIKEYVAYMNR 233
Query: 313 DKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K LH+ ++ + + + +++ALQWC DAYSD +LG+AN+IRTIDGGTH+EG+KA LT
Sbjct: 234 EKTALHEEIIYVSGEKNNVQVEVALQWCIDAYSDNLLGFANNIRTIDGGTHLEGLKAVLT 293
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RT+N++ +K +KD + +L+GE++REGLT +ISV+VP PEFEGQTKT+LGN EVR +VD
Sbjct: 294 RTMNTVARKRNKIKDNESNLAGENIREGLTAVISVKVPEPEFEGQTKTKLGNSEVRGIVD 353
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+ E L EY E + +V+DSIL K++ A KAA AA+RAR+LVR+KSVL SS LPGKLADC
Sbjct: 354 SFMGEVLNEYFEFNLNVVDSILEKAIQAFKAAEAARRARELVRRKSVLESSLLPGKLADC 413
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
S +SEI++VEGDSAGGSAKQGRDR+FQ I+ PL+ I
Sbjct: 414 SERDAAKSEIYLVEGDSAGGSAKQGRDRQFQAIL-PLRGKIL 454
>gi|56751624|ref|YP_172325.1| DNA gyrase subunit B [Synechococcus elongatus PCC 6301]
gi|81301300|ref|YP_401508.1| DNA gyrase subunit B [Synechococcus elongatus PCC 7942]
gi|25019687|gb|AAN71773.1| DNA gyrase subunit B [Synechococcus elongatus PCC 7942]
gi|56686583|dbj|BAD79805.1| DNA gyrase B subunit [Synechococcus elongatus PCC 6301]
gi|81170181|gb|ABB58521.1| DNA gyrase subunit B [Synechococcus elongatus PCC 7942]
Length = 645
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 283/465 (60%), Positives = 351/465 (75%), Gaps = 10/465 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ YG+ QIQVLEGLE VRKRP MYIGSTGP+GLHHLVYE++DNAVDEA AGY + I+V
Sbjct: 1 MANEYGASQIQVLEGLEPVRKRPGMYIGSTGPKGLHHLVYEVVDNAVDEALAGYCNTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
LL D S V DNGRGIP D+HP T KSALETVLT+LHAGGKFGG S LHGVG
Sbjct: 61 RLLEDGSCQVTDNGRGIPTDIHPQTGKSALETVLTILHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTVWR+G + Q++ +G P+ L V P D+ DR+GT++RF PD +
Sbjct: 119 VSVVNALSEYVEVTVWREGKTHQQRFEQGNPIGEL--QVAP-DADDRRGTQVRFKPDATI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQ---YNEYFFAGGLEEYVQW 309
F+ +FD+ T+A R++ELA+LN + I E KN Y+F GG+ EYV +
Sbjct: 176 FSETTEFDYGTLASRLKELAYLNAGVRIDFTDERLQLTKNHEPHQETYYFEGGIREYVAY 235
Query: 310 LNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+NTDK+ LH +++ + + DG+ ++ ALQWC DAYSD +LG+AN+IRTIDGGTHIEG+K
Sbjct: 236 MNTDKQALHSEIIFVQSEKDGVQVEAALQWCVDAYSDNILGFANNIRTIDGGTHIEGLKT 295
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTRT+N++ +K KD D +LSGE++REGLT I+SV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTMNTIARKRNKRKDADNNLSGENIREGLTAIVSVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+VD V E LTEYLE HP V D IL K++ A AA AA+RAR+LVR+KSVL SS+LPGKL
Sbjct: 356 IVDTLVGETLTEYLEFHPSVADLILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKL 415
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCSS P ESEIFIVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 416 ADCSSRDPGESEIFIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 459
>gi|260436552|ref|ZP_05790522.1| DNA gyrase, B subunit [Synechococcus sp. WH 8109]
gi|260414426|gb|EEX07722.1| DNA gyrase, B subunit [Synechococcus sp. WH 8109]
Length = 655
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 276/466 (59%), Positives = 346/466 (74%), Gaps = 8/466 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AG+ I V
Sbjct: 7 VQNAYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGHCDRILV 66
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L D S +V+DNGRGIP D+HP T KSALETVLTVLHAGGKFG + GY VSGGLHGVG
Sbjct: 67 VLGEDGSAAVSDNGRGIPTDVHPRTGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVG 124
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE ++VTV R G + Q++ RG + L P GT + F PD ++
Sbjct: 125 VSVVNALSEWVQVTVRRQGQVHRQRFERGAAIGELASESQPAAESGETGTTVCFKPDLEI 184
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDS---DPEKNQYNE-YFFAGGLEEYVQ 308
FT I FD+ T++ R+RELA+LN + I R E D E + E YF+ GG++EYV
Sbjct: 185 FTGGIVFDYATLSARLRELAYLNGGVRIVFRDERESARDEEGKPHEETYFYEGGIKEYVA 244
Query: 309 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
++N +K LH +++ + DG+ ++ ALQWCSDAYSD++LG+AN+IRT+DGGTHIEG+K
Sbjct: 245 YMNKEKDALHPEIIYVNSEKDGVQVEAALQWCSDAYSDSILGFANNIRTVDGGTHIEGLK 304
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
LTRTLN+ KK K+ D +L+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR
Sbjct: 305 TVLTRTLNAFAKKLGKRKESDSNLAGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVR 364
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
+VD V E L+++LE +P V+ IL K++ A AA AA+RAR+LVR+KSVL SS+LPGK
Sbjct: 365 GIVDNLVGEALSQFLEFNPSVISLILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGK 424
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LADCSS P ESEI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 425 LADCSSRDPGESEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 469
>gi|254526641|ref|ZP_05138693.1| DNA gyrase, B subunit [Prochlorococcus marinus str. MIT 9202]
gi|221538065|gb|EEE40518.1| DNA gyrase, B subunit [Prochlorococcus marinus str. MIT 9202]
Length = 655
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 271/472 (57%), Positives = 354/472 (75%), Gaps = 7/472 (1%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
+E + N +S YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA A
Sbjct: 2 SEDKRSNKISNDYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALA 61
Query: 125 GYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 184
G+ +IE+ L AD S ++DNGRGIP D+HP T KSALETVLTVLHAGGKFG S GY V
Sbjct: 62 GHCDHIEIILRADGSALISDNGRGIPTDIHPRTGKSALETVLTVLHAGGKFG--SGGYKV 119
Query: 185 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 244
SGGLHGVG+SVVNALSE + VTV+RDG E++Q++ +G L + ++GT I
Sbjct: 120 SGGLHGVGISVVNALSEWVNVTVYRDGSEFNQRFEKGLSKGELQTKK-QIGKSSKKGTTI 178
Query: 245 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE--YFFAGG 302
F PDK +F+ I+F++ ++ R+RELA+LN + I R E + + E Y + GG
Sbjct: 179 CFKPDKTIFSGGIEFEYALLSSRLRELAYLNGGVKIVFRDERNQLSDGSFKEEIYLYQGG 238
Query: 303 LEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGT 361
++EYV+++N +K+ +H +++ + + ++ ALQWCSD YSD +LG+AN+IRTIDGGT
Sbjct: 239 IKEYVEYMNAEKESIHPEIIYVDSQRENVYVEAALQWCSDVYSDNILGFANNIRTIDGGT 298
Query: 362 HIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 421
HIEG+K LTRT N+L KK KD + +L+GE++REGLT ++SV+VP+PEFEGQTKT+L
Sbjct: 299 HIEGLKTVLTRTFNNLAKKRGKRKDIEKNLAGENIREGLTVVLSVKVPDPEFEGQTKTKL 358
Query: 422 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 481
GN EVR +VD + E LT+Y+E +P +LD IL K++ + AA AA+RAR+LVR+KSVL S
Sbjct: 359 GNTEVRGIVDSLIGEALTKYMEFNPGILDLILEKAIQSFNAAEAARRARELVRRKSVLES 418
Query: 482 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
S+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR FQ I+ PL+ I
Sbjct: 419 STLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRNFQAIL-PLRGKIL 469
>gi|443312981|ref|ZP_21042595.1| DNA gyrase, B subunit [Synechocystis sp. PCC 7509]
gi|442777131|gb|ELR87410.1| DNA gyrase, B subunit [Synechocystis sp. PCC 7509]
Length = 646
Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust.
Identities = 266/465 (57%), Positives = 354/465 (76%), Gaps = 10/465 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +YG++QI+VL LE VR RP MYIG+TGP+GLHHLVYE++DN++DEA AG+ ++IE
Sbjct: 1 MTSSYGADQIRVLRDLEPVRMRPGMYIGTTGPKGLHHLVYEVVDNSIDEALAGHCTHIEA 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
AL D SV++ D+GRGIP D+HP T +SALETV+TVLHAGGKFG GY VSGGLHGVG
Sbjct: 61 ALNTDGSVTITDDGRGIPTDVHPQTGRSALETVMTVLHAGGKFG--DGGYKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTVWRD + Q++ RG P+ L D + R GT I F PD ++
Sbjct: 119 ISVVNALSEFVEVTVWRDKRVFTQRFERGIPIGDLQSKP---DKETRTGTSITFKPDSEI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 309
FT I+FD+ T+A R+RELA+LN + I R E +++ Y +AGG++EY+ +
Sbjct: 176 FTVGIEFDYITLASRLRELAYLNAGVKITFTDHRLELLKSNESKTETYEYAGGIKEYISY 235
Query: 310 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+N DK+PLH+ ++ + + + + ++++LQWC+D+Y+D +LG+AN+IRT +GGTH++G+KA
Sbjct: 236 INRDKQPLHEEIIYVQGERNNVQVEVSLQWCTDSYTDNVLGFANNIRTAEGGTHLDGLKA 295
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTRT+N++ +K +K+ + +LSGEHVREGLT +ISV+VPNPEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTMNAIARKRNKIKENEPNLSGEHVREGLTAVISVKVPNPEFEGQTKTKLGNTEVRG 355
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+VD V E LTEYLE P V D IL K++ A KAA AA+ AR+LVR+KSVL SS LPGKL
Sbjct: 356 IVDSLVGEVLTEYLEFRPPVADQILDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKL 415
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCS+ P ESEI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 416 ADCSTRDPSESEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 459
>gi|157414241|ref|YP_001485107.1| DNA gyrase subunit B [Prochlorococcus marinus str. MIT 9215]
gi|157388816|gb|ABV51521.1| DNA gyrase, subunit B [Prochlorococcus marinus str. MIT 9215]
Length = 655
Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust.
Identities = 271/472 (57%), Positives = 353/472 (74%), Gaps = 7/472 (1%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
+E + N +S YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA A
Sbjct: 2 SEDKRSNKISNDYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALA 61
Query: 125 GYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 184
G+ +IE+ L AD S ++DNGRGIP D+HP T KSALETVLTVLHAGGKFG S GY V
Sbjct: 62 GHCDHIEIVLRADGSALISDNGRGIPTDIHPRTGKSALETVLTVLHAGGKFG--SGGYKV 119
Query: 185 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 244
SGGLHGVG+SVVNALSE + VTV+RDG E++Q++ +G L + ++GT I
Sbjct: 120 SGGLHGVGISVVNALSEWVNVTVYRDGSEFNQRFEKGLSKGELQTKK-QIGKSSKKGTTI 178
Query: 245 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE--YFFAGG 302
F PDK +F+ I+F++ ++ R+RELA+LN + I R E + + E Y + GG
Sbjct: 179 CFKPDKTIFSGGIEFEYALLSSRLRELAYLNGGVKIVFRDERNQLSDGSFKEEIYLYQGG 238
Query: 303 LEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGT 361
++EYV+++N +K +H +++ + + ++ ALQWCSD YSD +LG+AN+IRTIDGGT
Sbjct: 239 IKEYVEYMNAEKDSIHPEIIYVDSQRENVYVEAALQWCSDVYSDNILGFANNIRTIDGGT 298
Query: 362 HIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 421
HIEG+K LTRT N+L KK KD + +L+GE++REGLT ++SV+VP+PEFEGQTKT+L
Sbjct: 299 HIEGLKTVLTRTFNNLAKKRGKRKDIEKNLAGENIREGLTVVLSVKVPDPEFEGQTKTKL 358
Query: 422 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 481
GN EVR +VD + E LT+Y+E +P +LD IL K++ + AA AA+RAR+LVR+KSVL S
Sbjct: 359 GNTEVRGIVDSLIGEALTKYMEFNPGILDLILEKAIQSFNAAEAARRARELVRRKSVLES 418
Query: 482 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
S+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR FQ I+ PL+ I
Sbjct: 419 STLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRNFQAIL-PLRGKIL 469
>gi|126697163|ref|YP_001092049.1| DNA gyrase subunit B [Prochlorococcus marinus str. MIT 9301]
gi|126544206|gb|ABO18448.1| DNA gyrase, subunit B [Prochlorococcus marinus str. MIT 9301]
Length = 655
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 271/472 (57%), Positives = 355/472 (75%), Gaps = 7/472 (1%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
+E + N +S YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHL+YE++DN+VDEA A
Sbjct: 2 SEDKRSNKISNDYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLIYEVVDNSVDEALA 61
Query: 125 GYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 184
G+ +IE+ L AD S ++DNGRGIP D+HP T KSALETVLTVLHAGGKFG S GY V
Sbjct: 62 GHCDHIEIVLRADGSALISDNGRGIPTDIHPRTGKSALETVLTVLHAGGKFG--SGGYKV 119
Query: 185 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 244
SGGLHGVG+SVVNALSE ++VTV+RDG E++Q++ +G L S ++GT I
Sbjct: 120 SGGLHGVGISVVNALSEWVKVTVYRDGSEFNQRFEKGISKGELESKKQTGKSS-KKGTTI 178
Query: 245 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE--YFFAGG 302
F PDK +F+ I+F++ ++ R+RELA+LN + I R E + + E Y + GG
Sbjct: 179 CFKPDKTIFSGGIEFEYALLSSRLRELAYLNGGVKIVFRDERNQLSDGSFKEEIYLYQGG 238
Query: 303 LEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGT 361
++EYV+++N +K+ +H +++ + + ++ ALQWCSD YSD +LG+AN+IRTIDGGT
Sbjct: 239 IKEYVEYMNAEKESIHPEIIYVDSQKENVYVEAALQWCSDVYSDNILGFANNIRTIDGGT 298
Query: 362 HIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 421
HIEG+K LTRT N+L KK KD + +L+GE++REGLT ++SV+VP+PEFEGQTKT+L
Sbjct: 299 HIEGLKTVLTRTFNNLAKKRGKRKDIEKNLAGENIREGLTVVLSVKVPDPEFEGQTKTKL 358
Query: 422 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 481
GN EVR +VD + E LT+Y+E +P +LD IL K++ + AA AA+RAR+LVR+KSVL S
Sbjct: 359 GNTEVRGIVDSLIGEALTKYMEFNPGILDLILEKAIQSFNAAEAARRARELVRRKSVLES 418
Query: 482 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
S+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR FQ I+ PL+ I
Sbjct: 419 STLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRNFQAIL-PLRGKIL 469
>gi|158337618|ref|YP_001518793.1| DNA gyrase subunit B [Acaryochloris marina MBIC11017]
gi|158307859|gb|ABW29476.1| DNA gyrase, B subunit [Acaryochloris marina MBIC11017]
Length = 646
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 275/465 (59%), Positives = 348/465 (74%), Gaps = 10/465 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ Y ++QIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AG+ +I +
Sbjct: 1 MATNYSADQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGHCKHIHI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L D SV V D+GRGIP D HP T KSALETV+TVLHAGGKF G S Y VSGGLHGVG
Sbjct: 61 YLNEDGSVRVTDDGRGIPTDKHPTTGKSALETVMTVLHAGGKFDGDS--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +E VWR+G + Q++ RG P + L V P D K+ GT I F PD +
Sbjct: 119 ISVVNALSEWVEAKVWRNGKVHTQRFERGIPKSELV--VEPTDRKE-SGTAITFLPDDTI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 309
FT +FD+ T+A R+RELA+LN + I+ R E + ++ + Y + GG++EYV +
Sbjct: 176 FTVTTEFDYKTLASRLRELAYLNAGVEISFHDNRLELLEADEPKVETYRYDGGIKEYVDY 235
Query: 310 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+N DK+P+H+ + + + + +++ALQWC DAYSD +LG+AN+IRTIDGGTH+EG+K
Sbjct: 236 MNRDKEPIHEECIYVEGERNNVQVEVALQWCRDAYSDNLLGFANNIRTIDGGTHLEGLKT 295
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTRT+NSL +K +KD D +L GEH+REGLT +ISV+VP PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTMNSLARKRSKLKDGDSNLGGEHIREGLTAVISVKVPEPEFEGQTKTKLGNTEVRG 355
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+VD V E LTEYL+ HP+V DS++ K+L A AA AA+RAR+LVR+KSVL SS+LPGKL
Sbjct: 356 IVDSLVGEVLTEYLDFHPNVADSVIEKALQAFNAAEAARRARELVRRKSVLESSTLPGKL 415
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCSS P SEI+IVEGDSAGGSAKQGRDR FQ I+ PL+ I
Sbjct: 416 ADCSSRDPSTSEIYIVEGDSAGGSAKQGRDRGFQAIL-PLRGKIL 459
>gi|359459125|ref|ZP_09247688.1| DNA gyrase subunit B [Acaryochloris sp. CCMEE 5410]
Length = 646
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 274/465 (58%), Positives = 347/465 (74%), Gaps = 10/465 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ Y ++QIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AG+ +I +
Sbjct: 1 MATNYSADQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGHCKHIHI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L D SV V D+GRGIP D HP T KSALETV+TVLHAGGKF G S Y VSGGLHGVG
Sbjct: 61 YLNEDGSVRVTDDGRGIPTDKHPTTGKSALETVMTVLHAGGKFDGDS--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +E VWR+G + Q++ RG P + L P D K+ GT I F PD +
Sbjct: 119 ISVVNALSEWVEAKVWRNGKVHTQRFERGIPKSELIAE--PTDRKE-SGTAITFLPDNTI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 309
FT +FD+ T+A R+RELA+LN + I+ R E + ++ + Y + GG++EYV +
Sbjct: 176 FTVTTEFDYKTLASRLRELAYLNAGVEISFHDNRLELLEADEPKVETYRYDGGIKEYVDY 235
Query: 310 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+N DK+P+H+ + + + + +++ALQWC DAYSD +LG+AN+IRTIDGGTH+EG+K
Sbjct: 236 MNRDKEPIHEECIYVEGERNNVQVEVALQWCRDAYSDNLLGFANNIRTIDGGTHLEGLKT 295
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTRT+NSL +K +KD D +L GEH+REGLT +ISV+VP PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTMNSLARKRSKLKDGDSNLGGEHIREGLTAVISVKVPEPEFEGQTKTKLGNTEVRG 355
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+VD V E LTEYL+ HP+V DS++ K+L A AA AA+RAR+LVR+KSVL SS+LPGKL
Sbjct: 356 IVDSLVGEVLTEYLDFHPNVADSVIEKALQAFNAAEAARRARELVRRKSVLESSTLPGKL 415
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCSS P SEI+IVEGDSAGGSAKQGRDR FQ I+ PL+ I
Sbjct: 416 ADCSSRDPSTSEIYIVEGDSAGGSAKQGRDRGFQAIL-PLRGKIL 459
>gi|78780112|ref|YP_398224.1| DNA gyrase subunit B [Prochlorococcus marinus str. MIT 9312]
gi|78713611|gb|ABB50788.1| DNA gyrase subunit B [Prochlorococcus marinus str. MIT 9312]
Length = 655
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 270/472 (57%), Positives = 354/472 (75%), Gaps = 7/472 (1%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
+E + N +S YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA A
Sbjct: 2 SEDKRSNKISNEYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALA 61
Query: 125 GYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 184
G+ +IE+ L +D S ++DNGRGIP D+HP T KSALETVLTVLHAGGKFG S GY V
Sbjct: 62 GHCDHIEIVLQSDGSALISDNGRGIPTDIHPRTGKSALETVLTVLHAGGKFG--SGGYKV 119
Query: 185 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 244
SGGLHGVG+SVVNALSE + VTV+RDG E++Q++ +G L ++GT I
Sbjct: 120 SGGLHGVGISVVNALSEWVNVTVYRDGSEFNQRFEKGVSQNVLQSKKQTKKPF-KKGTTI 178
Query: 245 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE--YFFAGG 302
F PDK +F+ I+F++ ++ R+RELA+LN + I R E + + E Y + GG
Sbjct: 179 CFKPDKTIFSGGIEFEYALLSSRLRELAYLNGGVKIVFRDERNKLSDGSFKEEIYLYQGG 238
Query: 303 LEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGT 361
++EYVQ++N +K+ +H D++ + + ++ ALQWCSD YSD +LG+AN+IRTIDGGT
Sbjct: 239 IKEYVQYMNAEKEAIHPDIIYVDSQKENVYVEAALQWCSDVYSDNILGFANNIRTIDGGT 298
Query: 362 HIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 421
HIEG+K LTRT N+L KK KD + +L+GE++REGLT ++SV+VP+PEFEGQTKT+L
Sbjct: 299 HIEGLKTVLTRTFNNLAKKRGKRKDIEKNLAGENIREGLTVVLSVKVPDPEFEGQTKTKL 358
Query: 422 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 481
GN EVR +VD + E LT+++E +P +LD +L K++ + AA AA+RAR+LVR+KSVL S
Sbjct: 359 GNTEVRGIVDSLIGEALTKFMEFNPGILDLVLEKAIQSFNAAEAARRARELVRRKSVLES 418
Query: 482 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
S+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR+FQ I+ PL+ I
Sbjct: 419 STLPGKLADCSSRDPAESEIYIVEGDSAGGSAKQGRDRKFQAIL-PLRGKIL 469
>gi|255073667|ref|XP_002500508.1| predicted protein [Micromonas sp. RCC299]
gi|226515771|gb|ACO61766.1| predicted protein [Micromonas sp. RCC299]
Length = 703
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 279/466 (59%), Positives = 349/466 (74%), Gaps = 9/466 (1%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S YG+ IQVL+GLE VRKRP MYIG+T +GLHH+V+E+LDN VDE QAG+AS I V
Sbjct: 52 SDAYGASSIQVLKGLEPVRKRPGMYIGNTSTKGLHHMVWEVLDNGVDEVQAGHASLITVT 111
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ AD SV+V D+GRGIP D+HPAT S+LETVLTVLHAGGKFGG SGY VSGGLHGVG+
Sbjct: 112 VEADGSVAVEDDGRGIPTDVHPATGTSSLETVLTVLHAGGKFGGDESGYHVSGGLHGVGI 171
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGK---PVTTLTCHVLPVDSKDRQGTRIRFWPDK 250
SVVNALS+S EVTVWR EY Q +SRG P+T + V V K +GTR+RF PD
Sbjct: 172 SVVNALSDSTEVTVWRGDREYRQSFSRGAALAPMTEGSQDVANVGKK--KGTRVRFKPDP 229
Query: 251 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQ--YNEYF-FAGGLEEYV 307
+F FD N I R++ELAFLN T ++ D +K + Y E F GGL++YV
Sbjct: 230 SIFKERQDFDPNIILARMKELAFLNSTATDEASMDEGDVKKTEEYYEEVLSFPGGLKDYV 289
Query: 308 QWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
LN +PLH+ + FR +VDG+ ++ ALQW +AY+DT+LGYANSIRT DGGTH++G+K
Sbjct: 290 VDLNEGAEPLHEPITFRAEVDGVQVEGALQWTKEAYTDTLLGYANSIRTSDGGTHLDGLK 349
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
SLTR +N+ +K+K +K+ D +L GEH+REGL+ +I+V VP PEFEGQTKTRLGNPEVR
Sbjct: 350 QSLTRAVNTQARKAKLLKEADANLGGEHIREGLSAVIAVWVPQPEFEGQTKTRLGNPEVR 409
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
KVV+ + E ++E+LE +P+ L SI SK+ A KAA AAKRAR+LVR+KSVLRS SLPGK
Sbjct: 410 KVVESVIGEQVSEHLEFYPNTLGSIFSKASQAQKAAEAAKRARELVRRKSVLRSGSLPGK 469
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
L+DCS + PE +EIF+VEGDSAGGSAKQGRDRRFQ ++ PL+ I
Sbjct: 470 LSDCSVSDPESTEIFLVEGDSAGGSAKQGRDRRFQAVL-PLRGKIL 514
>gi|37522075|ref|NP_925452.1| DNA gyrase subunit B [Gloeobacter violaceus PCC 7421]
gi|35213074|dbj|BAC90447.1| DNA gyrase subunit B [Gloeobacter violaceus PCC 7421]
Length = 644
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 271/467 (58%), Positives = 346/467 (74%), Gaps = 9/467 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+++TYG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYEI+DN+VDEA AG+ +I +
Sbjct: 1 MTETYGAEQIQVLEGLEHVRKRPGMYIGSTGPRGLHHLVYEIVDNSVDEALAGHCKHIAI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+L AD S ++ D+GRGIP D HP T KS +ETVLTVL AGGKFGG S LHGVG
Sbjct: 61 SLGADGSATITDDGRGIPTDTHPRTGKSTIETVLTVLGAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+VVNALS L T+WR+G +Y Q++ RG P L + DS+ R+GT I F PD ++
Sbjct: 119 AAVVNALSTILTATIWREGKQYIQRFHRGIPEGGL---AVSSDSQKRRGTMISFLPDPEI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FTT + FD +T+ R RELAFLN + R D E + Y + GG+ EYV+++
Sbjct: 176 FTTGVDFDFDTLLSRFRELAFLNAG--VEFRFSDLRGETERTESYIYEGGIREYVKYMTR 233
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K LH D++ ++ DG++++ ALQW +D Y+D +LG+AN+IRTIDGGTH+EG+KA LT
Sbjct: 234 EKAALHPDIIFINQERDGVSVECALQWSTDVYNDNVLGFANNIRTIDGGTHLEGLKAVLT 293
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RT NS +K+ +KD D +L+GEHVREGLT ++SV+VPNPEFEGQTKT+LGNPEVR +VD
Sbjct: 294 RTFNSFARKANKLKDGDKNLTGEHVREGLTAVLSVKVPNPEFEGQTKTKLGNPEVRGIVD 353
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+ E LTEYLE HPDV+ SIL K+L +++A AA++ARDLVR+KS L SS+LPGKLADC
Sbjct: 354 GVISEKLTEYLEFHPDVVASILEKALQSMQAEEAARKARDLVRRKSALESSTLPGKLADC 413
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESE+F+VEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 414 QSRDPAESEVFLVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNIERA 459
>gi|428217864|ref|YP_007102329.1| DNA gyrase subunit B [Pseudanabaena sp. PCC 7367]
gi|427989646|gb|AFY69901.1| DNA gyrase subunit B [Pseudanabaena sp. PCC 7367]
Length = 646
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 270/465 (58%), Positives = 346/465 (74%), Gaps = 8/465 (1%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+TY ++ IQVLEGLE VRKRP MYIGSTGP+GLHHLVYE++DN+VDEA GY I V L
Sbjct: 8 ETYNADNIQVLEGLEPVRKRPGMYIGSTGPKGLHHLVYEVVDNSVDEALGGYCDTILVEL 67
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
LAD SV+V DNGRGIP D+HP T KSALETV+TVLHAGGKF G+S Y VSGGLHGVG+S
Sbjct: 68 LADGSVAVTDNGRGIPTDVHPRTGKSALETVMTVLHAGGKFDGNS--YKVSGGLHGVGVS 125
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALSE +EV+VWR G + Q+Y RG P+ L V K ++GT++ F PD +F
Sbjct: 126 VVNALSEWVEVSVWRQGKLHQQRYERGIPIGNL--EVSTAKDKQKRGTKVCFMPDTMIFA 183
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
T I+F+ + + GR+RELA+LN L I + D E ++ Y + GG+ EYV ++ DK
Sbjct: 184 TGIEFEFDILVGRLRELAYLNAGLKIEI--ADRRGETDKVETYQYDGGIREYVSYMTRDK 241
Query: 315 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+ LH +++ + + + I I++A+QWC D+YSD + G+AN+IRT+DGGTH+EG+K LTRT
Sbjct: 242 EALHPEIIYIKGERNDIQIEVAMQWCIDSYSDNVFGFANNIRTVDGGTHLEGLKTVLTRT 301
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+NS +K K +KD D +L+GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR VD
Sbjct: 302 INSTARKLKKLKDSDSNLAGENVREGLTAVISVKVPEPEFEGQTKTKLGNTEVRGTVDSF 361
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
V E L E++E +P V +I+ K+L + AA AA+RAR+LVR+KSVL SS+LPGKLADCSS
Sbjct: 362 VGEVLNEFIEFNPQVASTIIEKALQSYNAAEAARRARELVRRKSVLESSTLPGKLADCSS 421
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P ESE+FIVEGDSAGGSAKQGRDR FQ I+ PL+ + A
Sbjct: 422 RDPSESELFIVEGDSAGGSAKQGRDRHFQAIL-PLRGKVLNIERA 465
>gi|123969376|ref|YP_001010234.1| DNA gyrase subunit B [Prochlorococcus marinus str. AS9601]
gi|123199486|gb|ABM71127.1| DNA gyrase, subunit B [Prochlorococcus marinus str. AS9601]
Length = 655
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 270/472 (57%), Positives = 352/472 (74%), Gaps = 7/472 (1%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
+E + N +S YG++QIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA A
Sbjct: 2 SEDKRSNKISNDYGADQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALA 61
Query: 125 GYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 184
G+ +IE+ L AD S ++DNGRGIP D+HP T KSALETVLTVLHAGGKFG S GY V
Sbjct: 62 GHCDHIEIVLRADGSAFISDNGRGIPTDIHPRTGKSALETVLTVLHAGGKFG--SGGYKV 119
Query: 185 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 244
SGGLHGVG+SVVNALSE + VTV+RDG E++Q++ +G L ++GT I
Sbjct: 120 SGGLHGVGISVVNALSEWVNVTVYRDGSEFNQRFEKGVSKGELQAKK-QTGKPFKKGTSI 178
Query: 245 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE--YFFAGG 302
F PDK +F+ I+F++ ++ R+RELA+LN + I R E + + E Y + GG
Sbjct: 179 CFKPDKTIFSGGIEFEYALLSSRLRELAYLNGGVKIVFRDERNQLSDGSFKEEIYLYQGG 238
Query: 303 LEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGT 361
++EYV+++N +K +H +++ + + ++ ALQWCSD YSD +LG+AN+IRTIDGGT
Sbjct: 239 IKEYVEYMNAEKDSIHPEIIYVDSQKENVYVEAALQWCSDVYSDNILGFANNIRTIDGGT 298
Query: 362 HIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 421
HIEG+K LTRT N+L KK KD + +L+GE++REGLT ++SV+VP+PEFEGQTKT+L
Sbjct: 299 HIEGLKTVLTRTFNNLAKKRGKRKDIEKNLAGENIREGLTVVLSVKVPDPEFEGQTKTKL 358
Query: 422 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 481
GN EVR +VD + E LT+Y+E +P +LD IL K++ + AA AA+RAR+LVR+KSVL S
Sbjct: 359 GNTEVRGIVDSLIGEALTKYMEFNPAILDLILEKAIQSFNAAEAARRARELVRRKSVLES 418
Query: 482 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
S+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR FQ I+ PL+ I
Sbjct: 419 STLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRNFQAIL-PLRGKIL 469
>gi|298491608|ref|YP_003721785.1| DNA gyrase subunit B ['Nostoc azollae' 0708]
gi|298233526|gb|ADI64662.1| DNA gyrase, B subunit ['Nostoc azollae' 0708]
Length = 645
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 279/465 (60%), Positives = 359/465 (77%), Gaps = 10/465 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIG+TGPRGLHHLVYE++DN+VDEA AG+ +++EV
Sbjct: 1 MTSSYSADQIQVLEGLEAVRKRPGMYIGTTGPRGLHHLVYEVVDNSVDEALAGHCTHVEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ AD SV+V D+GRGIP+D+HP T KSALETVLTVLHAGGKFGG S LHGVG
Sbjct: 61 DINADGSVTVTDDGRGIPVDIHPKTGKSALETVLTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTVWRD E+ Q+Y R PVT L V P + R GT I F PD Q+
Sbjct: 119 ISVVNALSEFVEVTVWRDNKEHLQRYERSFPVTEL--QVKPY-KEPRTGTSITFKPDTQI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 309
FT +I+FD+ T++GR+RELA+LN + I R E + + Y + GG++EYV +
Sbjct: 176 FTISIEFDYITLSGRLRELAYLNAGVKIIFTDHRLELLKSDTPRIEIYEYKGGIKEYVAY 235
Query: 310 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+N +K+PLH+ ++ + + + + ++++LQWC+DAY+D +LG+AN+IRTIDGGTH+EG+KA
Sbjct: 236 MNREKQPLHEEIIYVQGERNNVQVEVSLQWCTDAYTDNVLGFANNIRTIDGGTHLEGLKA 295
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTRTLN++ +K +K+ + +LSGEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTLNAIARKRNKIKENESNLSGEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+VD V E LTEYLE HP + D+IL K++ A KAA AA+ AR+LVR+KSVL SS LPGKL
Sbjct: 356 IVDSFVGEVLTEYLEFHPSIADAILDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKL 415
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCSS P ESEIFIVEGDSAGGSAKQGRDRR Q I+ PL+ I
Sbjct: 416 ADCSSRDPSESEIFIVEGDSAGGSAKQGRDRRTQAIL-PLRGKIL 459
>gi|17232757|ref|NP_489305.1| DNA gyrase subunit B [Nostoc sp. PCC 7120]
gi|17134404|dbj|BAB76964.1| DNA gyrase B subunit [Nostoc sp. PCC 7120]
Length = 645
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 278/465 (59%), Positives = 356/465 (76%), Gaps = 10/465 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN++DEA AGY ++IEV
Sbjct: 1 MTSSYSADQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHIEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ AD SV+V D+GRGIPID H T KSALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 EINADGSVAVTDDGRGIPIDTHSRTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTVWRD + Q+Y RG PVT L + + R GT + F PD Q+
Sbjct: 119 ISVVNALSEVVEVTVWRDKKVHTQRYERGVPVTELITNPY---KEARTGTSVTFKPDTQI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 309
FT +I+FD+ T++GR+RELA+LN + I R E + + Y + GG++EY+ +
Sbjct: 176 FTNSIEFDYITLSGRLRELAYLNAGVKITFTDNRLELLKSDTPKVESYEYKGGIKEYIAY 235
Query: 310 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+N DK+PLH+ ++ + + + + I+++LQWC+DAY+D +LG+AN+IRTIDGGTH+EG+KA
Sbjct: 236 MNRDKQPLHEEIIYVQGERNNVQIEVSLQWCTDAYTDNVLGFANNIRTIDGGTHLEGLKA 295
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTRTLN++ +K +K+ + +LSGEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTLNTIARKRNKIKEHEPNLSGEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+VD V E LTEYLE HP + DSIL K++ A KAA AA+ AR+LVR+KSVL SS LPGKL
Sbjct: 356 IVDSLVGEVLTEYLEFHPGIADSILDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKL 415
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCSS P ESEI+IVEGDSAGGSAKQGRDRR Q I+ PL+ I
Sbjct: 416 ADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRTQAIL-PLRGKIL 459
>gi|427718008|ref|YP_007066002.1| DNA gyrase subunit B [Calothrix sp. PCC 7507]
gi|427350444|gb|AFY33168.1| DNA gyrase subunit B [Calothrix sp. PCC 7507]
Length = 645
Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust.
Identities = 279/465 (60%), Positives = 355/465 (76%), Gaps = 10/465 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIG+TGPRGLHHLVYE++DN+VDEA AGY +++EV
Sbjct: 1 MTSSYSADQIQVLEGLEAVRKRPGMYIGTTGPRGLHHLVYEVVDNSVDEALAGYCTHVEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L AD SV+V D+GRGIP D+HP T KSALETVLTVLHAGGKFGG S LHGVG
Sbjct: 61 DLNADGSVTVTDDGRGIPTDIHPKTGKSALETVLTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTVWRD + Q+Y RG PVT L + R GT F PD Q+
Sbjct: 119 ISVVNALSEFVEVTVWRDKKVHLQRYERGVPVTELQAKPY---KEARTGTSTTFKPDTQI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 309
F+T I+FD+ T++GR+RELA+LN + I R E + + Y + GG++EY+ +
Sbjct: 176 FSTGIEFDYITLSGRLRELAYLNAGVKITFTDHRLELLKSDTAKVETYEYRGGIKEYIAY 235
Query: 310 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+N +K+PLH+ ++ + + + + I+++LQWC+DAY+D +LG+AN+IRT+DGGTH+EG+KA
Sbjct: 236 MNREKQPLHEEIIYVQGERNNVQIEVSLQWCTDAYTDNVLGFANNIRTVDGGTHLEGLKA 295
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTRTLN++ +K +K+ + +LSGEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTLNAIARKRNKIKENEPNLSGEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+VD V E LTEYLE HP V DSIL K++ A KAA AA+ AR+LVR+KSVL SS LPGKL
Sbjct: 356 IVDSLVGEVLTEYLEFHPGVADSILDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKL 415
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCSS P ESEIFIVEGDSAGGSAKQGRDRR Q I+ PL+ I
Sbjct: 416 ADCSSRDPSESEIFIVEGDSAGGSAKQGRDRRTQAIL-PLRGKIL 459
>gi|440682268|ref|YP_007157063.1| transcriptional regulator, XRE family [Anabaena cylindrica PCC
7122]
gi|428679387|gb|AFZ58153.1| transcriptional regulator, XRE family [Anabaena cylindrica PCC
7122]
Length = 1197
Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust.
Identities = 282/465 (60%), Positives = 363/465 (78%), Gaps = 10/465 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIG+TGPRGLHHLVYE++DN+VDEA AG+ +++EV
Sbjct: 1 MTSSYSADQIQVLEGLEAVRKRPGMYIGTTGPRGLHHLVYEVVDNSVDEALAGHCTHVEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ AD SV+V D+GRGIP+D+HP T KSALETVLTVLHAGGKFGG VSGGLHGVG
Sbjct: 61 DINADGSVTVTDDGRGIPVDIHPKTGKSALETVLTVLHAGGKFGGGGY--KVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTVWRD E+ Q+Y R PVT L V P + R GT I F PD Q+
Sbjct: 119 ISVVNALSEFVEVTVWRDNKEHLQRYERSFPVTEL--QVKPY-KEARTGTSITFKPDTQI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 309
FTT+I+FD+ T++GR+RELA+LN + I R E + + Y + GG++EY+ +
Sbjct: 176 FTTSIEFDYITLSGRLRELAYLNAGVKIIFTDHRLELLKSDTPKIEVYEYKGGIKEYIAY 235
Query: 310 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+N +K+PLH+ ++ + + + + ++++LQWC+DAY+D +LG+AN+IRTIDGGTH+EG+KA
Sbjct: 236 MNREKQPLHEEIIYVQGERNNVQVEVSLQWCTDAYTDNVLGFANNIRTIDGGTHLEGLKA 295
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTRTLN++ +K +K+ + +LSGEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTLNAIARKRNKIKEHESNLSGEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+VD V E LTEYLE HP + DSIL K++ A KAA AA+ AR+LVR+KSVL SS LPGKL
Sbjct: 356 IVDSFVGEVLTEYLEFHPAIADSILDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKL 415
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCSS P ESEI+IVEGDSAGGSAKQGRDRR Q I+ PL+ I
Sbjct: 416 ADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRTQAIL-PLRGKIL 459
>gi|427705874|ref|YP_007048251.1| DNA gyrase subunit B [Nostoc sp. PCC 7107]
gi|427358379|gb|AFY41101.1| DNA gyrase subunit B [Nostoc sp. PCC 7107]
Length = 645
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 279/465 (60%), Positives = 352/465 (75%), Gaps = 10/465 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AGY ++IE+
Sbjct: 1 MTSSYSADQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGYCTHIEI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ AD SV+V D+GRGIP D H T KSALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 DINADGSVTVTDDGRGIPTDTHSRTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTVWRD + Q+Y RG PVT L + R GT + F PD Q+
Sbjct: 119 ISVVNALSEVVEVTVWRDKKVHTQRYERGVPVTELVAKPY---KEARTGTSVTFKPDTQI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 309
FTT I+FD T+AGR+RELA+LN + I R E + + Y + GG++EY+ +
Sbjct: 176 FTTGIEFDFITLAGRLRELAYLNAGVKITFTDNRLELLKSDTPKIETYEYRGGIKEYIAY 235
Query: 310 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+N DK+PLH+ ++ + + + I++ALQWC+DAY+D +LG+AN+IRT+DGGTH+EG+KA
Sbjct: 236 MNRDKQPLHEEIIYVQGERSNVQIEVALQWCTDAYTDNVLGFANNIRTVDGGTHLEGLKA 295
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTRTLN++ +K +K+ + +LSGEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTLNAIARKRNKIKENEPNLSGEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+VD V E LTEYLE HP + DSIL K++ A KAA AA+ AR+LVR+KSVL SS LPGKL
Sbjct: 356 IVDSLVGEVLTEYLEFHPGIADSILDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKL 415
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCSS P ESEI+IVEGDSAGGSAKQGRDRR Q I+ PL+ I
Sbjct: 416 ADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRTQAIL-PLRGKIL 459
>gi|425437811|ref|ZP_18818224.1| DNA gyrase subunit B [Microcystis aeruginosa PCC 9432]
gi|389677105|emb|CCH93919.1| DNA gyrase subunit B [Microcystis aeruginosa PCC 9432]
Length = 1075
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 266/440 (60%), Positives = 340/440 (77%), Gaps = 8/440 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IEV
Sbjct: 1 MTSNYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ AD SVSV D+GRGIP D+HP T KSALETVLT+LHAGGKFG S GY VSGGLHGVG
Sbjct: 61 DIKADGSVSVTDDGRGIPTDVHPTTGKSALETVLTILHAGGKFG--SGGYKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS ++VTVWRD + Q+Y RG PVT L V +++ GTR+ F PD ++
Sbjct: 119 ISVVNALSAWVDVTVWRDHKVHTQRYERGIPVTEL---VSSPSQEEKTGTRVNFLPDTEI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F+ I+FD++T++GR+RELA+LN + I D PE+ Y + GG++EYV ++
Sbjct: 176 FSQGIEFDYSTLSGRLRELAYLNAGVKITF--SDYRPEEPHIETYCYEGGIKEYVAYMCR 233
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K+ LH D++ + GI I++A QWC DAYSD +LG+AN+IRTIDGGTH+EG+KA LT
Sbjct: 234 EKETLHKDIIYVSGEKTGINIEVAFQWCIDAYSDNILGFANNIRTIDGGTHLEGLKAVLT 293
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RTLN++ +K +K+ + +L+GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD
Sbjct: 294 RTLNNVARKRNKIKENEPNLAGENVREGLTAVISVKVPEPEFEGQTKTKLGNTEVRGIVD 353
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E L EYLE +P V D+I+ K++ A KAA AA+RARDLVR+KSVL SS LPGKLADC
Sbjct: 354 SLVGETLNEYLEQNPQVADTIIEKAVQAYKAAEAARRARDLVRRKSVLESSPLPGKLADC 413
Query: 492 SSTTPEESEIFIVEGDSAGG 511
S PE+SEI+IVEGDSAGG
Sbjct: 414 SERDPEKSEIYIVEGDSAGG 433
>gi|440754241|ref|ZP_20933443.1| DNA gyrase, B subunit [Microcystis aeruginosa TAIHU98]
gi|440174447|gb|ELP53816.1| DNA gyrase, B subunit [Microcystis aeruginosa TAIHU98]
Length = 1075
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 266/440 (60%), Positives = 340/440 (77%), Gaps = 8/440 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IEV
Sbjct: 1 MTSNYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ AD SVSV D+GRGIP D+HP T KSALETVLT+LHAGGKFG S GY VSGGLHGVG
Sbjct: 61 DIKADGSVSVTDDGRGIPTDVHPTTGKSALETVLTILHAGGKFG--SGGYKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS ++VTVWRD + Q+Y RG PVT L V +++ GTR+ F PD ++
Sbjct: 119 ISVVNALSAWVDVTVWRDHKVHTQRYERGIPVTEL---VSSPSQEEKTGTRVNFLPDTEI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F+ I+FD++T++GR+RELA+LN + I D PE+ Y + GG++EYV ++
Sbjct: 176 FSQGIEFDYSTLSGRLRELAYLNAGVKITF--SDYRPEEPHIETYCYEGGIKEYVAYMCR 233
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K+ LH D++ + GI I++A QWC DAYSD +LG+AN+IRTIDGGTH+EG+KA LT
Sbjct: 234 EKETLHKDIIYVSGEKTGINIEVAFQWCIDAYSDNILGFANNIRTIDGGTHLEGLKAVLT 293
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RTLN++ +K +K+ + +L+GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD
Sbjct: 294 RTLNNVARKRNKIKENEPNLAGENVREGLTAVISVKVPEPEFEGQTKTKLGNTEVRGIVD 353
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E L EYLE +P V D+I+ K++ A KAA AA+RARDLVR+KSVL SS LPGKLADC
Sbjct: 354 SLVGETLNEYLEQNPQVADTIIEKAVQAYKAAEAARRARDLVRRKSVLESSPLPGKLADC 413
Query: 492 SSTTPEESEIFIVEGDSAGG 511
S PE+SEI+IVEGDSAGG
Sbjct: 414 SERDPEKSEIYIVEGDSAGG 433
>gi|425449518|ref|ZP_18829357.1| DNA gyrase subunit B [Microcystis aeruginosa PCC 7941]
gi|389763743|emb|CCI09788.1| DNA gyrase subunit B [Microcystis aeruginosa PCC 7941]
Length = 1075
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 266/440 (60%), Positives = 340/440 (77%), Gaps = 8/440 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IEV
Sbjct: 1 MTSNYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ AD SVSV D+GRGIP D+HP T KSALETVLT+LHAGGKFG S GY VSGGLHGVG
Sbjct: 61 DIKADGSVSVTDDGRGIPTDVHPTTGKSALETVLTILHAGGKFG--SGGYKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS ++VTVWRD + Q+Y RG PVT L V +++ GTR+ F PD ++
Sbjct: 119 ISVVNALSAWVDVTVWRDHKVHTQRYERGIPVTEL---VSSPSQEEKTGTRVNFLPDTEI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F+ I+FD++T++GR+RELA+LN + I D PE+ Y + GG++EYV ++
Sbjct: 176 FSQGIEFDYSTLSGRLRELAYLNAGVKITF--SDYRPEEPHIETYCYEGGIKEYVAYMCR 233
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K+ LH D++ + GI I++A QWC DAYSD +LG+AN+IRTIDGGTH+EG+KA LT
Sbjct: 234 EKETLHKDIIYVSGEKTGINIEVAFQWCIDAYSDNILGFANNIRTIDGGTHLEGLKAVLT 293
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RTLN++ +K +K+ + +L+GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD
Sbjct: 294 RTLNNVARKRNKIKENEPNLAGENVREGLTAVISVKVPEPEFEGQTKTKLGNTEVRGIVD 353
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E L EYLE +P V D+I+ K++ A KAA AA+RARDLVR+KSVL SS LPGKLADC
Sbjct: 354 SLVGETLNEYLEQNPQVADTIIEKAVQAYKAAEAARRARDLVRRKSVLESSPLPGKLADC 413
Query: 492 SSTTPEESEIFIVEGDSAGG 511
S PE+SEI+IVEGDSAGG
Sbjct: 414 SERDPEKSEIYIVEGDSAGG 433
>gi|425468357|ref|ZP_18847382.1| DNA gyrase subunit B [Microcystis aeruginosa PCC 9701]
gi|389884985|emb|CCI34763.1| DNA gyrase subunit B [Microcystis aeruginosa PCC 9701]
Length = 888
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 266/440 (60%), Positives = 341/440 (77%), Gaps = 8/440 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IEV
Sbjct: 1 MTSNYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ AD SVSV D+GRGIP D+HP T KSALETVLT+LHAGGKFG S GY VSGGLHGVG
Sbjct: 61 DIKADGSVSVTDDGRGIPTDVHPTTGKSALETVLTILHAGGKFG--SGGYKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS ++VTVWRD + Q+Y RG PVT L V +++ GTR+ F PD ++
Sbjct: 119 ISVVNALSAWVDVTVWRDHKVHTQRYERGIPVTEL---VSSPGQEEKTGTRVNFLPDTEI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F+ I+FD++T++GR+RELA+LN + I D PE+ Y + GG++EYV ++
Sbjct: 176 FSQGIEFDYSTLSGRLRELAYLNAGVKITF--SDYRPEEPHIETYCYEGGIKEYVAYMCR 233
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K+ LH D++ + +GI I++A QWC DAYSD +LG+AN+IRTIDGGTH+EG+KA LT
Sbjct: 234 EKETLHKDIIYVSGEKNGINIEVAFQWCIDAYSDNILGFANNIRTIDGGTHLEGLKAVLT 293
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RTLN++ +K +K+ + +L+GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD
Sbjct: 294 RTLNNVARKRNKIKENEPNLAGENVREGLTAVISVKVPEPEFEGQTKTKLGNTEVRGIVD 353
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E L EYLE +P V D+I+ K++ A KAA AA+RARDLVR+KSVL SS LPGKLADC
Sbjct: 354 SLVGETLNEYLEQNPQVADTIIEKAVQAYKAAEAARRARDLVRRKSVLESSPLPGKLADC 413
Query: 492 SSTTPEESEIFIVEGDSAGG 511
S PE+SEI+IVEGDSAGG
Sbjct: 414 SERDPEKSEIYIVEGDSAGG 433
>gi|425441164|ref|ZP_18821449.1| DNA gyrase subunit B [Microcystis aeruginosa PCC 9717]
gi|389718204|emb|CCH97809.1| DNA gyrase subunit B [Microcystis aeruginosa PCC 9717]
Length = 888
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 266/440 (60%), Positives = 340/440 (77%), Gaps = 8/440 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IEV
Sbjct: 1 MTSNYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ AD SVSV D+GRGIP D+HP T KSALETVLT+LHAGGKFG S GY VSGGLHGVG
Sbjct: 61 DIKADGSVSVTDDGRGIPTDVHPTTGKSALETVLTILHAGGKFG--SGGYKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS ++VTVWRD + Q+Y RG PVT L V +++ GTR+ F PD ++
Sbjct: 119 ISVVNALSAWVDVTVWRDHKVHTQRYERGIPVTEL---VSSPSQEEKTGTRVNFLPDTEI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F+ I+FD++T++GR+RELA+LN + I D PE+ Y + GG++EYV ++
Sbjct: 176 FSQGIEFDYSTLSGRLRELAYLNAGVKITF--SDYRPEEPHIETYCYEGGIKEYVAYMCR 233
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K+ LH D++ + +GI I++A QWC DAYSD +LG+AN+IRTIDGGTH+EG+KA LT
Sbjct: 234 EKETLHKDIIYVSGEKNGINIEVAFQWCIDAYSDNILGFANNIRTIDGGTHLEGLKAVLT 293
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RTLN++ +K +K+ + +L+GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD
Sbjct: 294 RTLNNVARKRNKIKENEPNLAGENVREGLTAVISVKVPEPEFEGQTKTKLGNTEVRGIVD 353
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E L EYLE +P V D+I+ K++ A KAA AA+RARDLVR+KSVL SS LPGKLADC
Sbjct: 354 SLVGETLNEYLEQNPQVADTIIEKAVQAYKAAEAARRARDLVRRKSVLESSPLPGKLADC 413
Query: 492 SSTTPEESEIFIVEGDSAGG 511
S PE SEI+IVEGDSAGG
Sbjct: 414 SERDPERSEIYIVEGDSAGG 433
>gi|425447203|ref|ZP_18827194.1| DNA gyrase subunit B [Microcystis aeruginosa PCC 9443]
gi|389732296|emb|CCI03745.1| DNA gyrase subunit B [Microcystis aeruginosa PCC 9443]
Length = 888
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 266/440 (60%), Positives = 341/440 (77%), Gaps = 8/440 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IEV
Sbjct: 1 MTSNYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ AD SVSV D+GRGIP D+HP T KSALETVLT+LHAGGKFG S GY VSGGLHGVG
Sbjct: 61 DIKADGSVSVTDDGRGIPTDVHPTTGKSALETVLTILHAGGKFG--SGGYKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS ++VTVWRD + Q+Y RG PVT L V +++ GTR+ F PD ++
Sbjct: 119 ISVVNALSAWVDVTVWRDHKVHIQRYERGIPVTEL---VSSPSQEEKTGTRVNFLPDTEI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F+ I+FD++T++GR+RELA+LN + I D PE+ Y + GG++EYV ++
Sbjct: 176 FSQGIEFDYSTLSGRLRELAYLNAGVKITF--SDYRPEEPHIETYCYEGGIKEYVAYMCR 233
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K+ LH D++ + +GI I++A QWC DAYSD +LG+AN+IRTIDGGTH+EG+KA LT
Sbjct: 234 EKETLHKDIIYVSGEKNGINIEVAFQWCIDAYSDNILGFANNIRTIDGGTHLEGLKAVLT 293
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RTLN++ +K +K+ + +L+GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD
Sbjct: 294 RTLNNVARKRNKIKENEPNLAGENVREGLTAVISVKVPEPEFEGQTKTKLGNTEVRGIVD 353
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E L EYLE +P V D+I+ K++ A KAA AA+RARDLVR+KSVL SS LPGKLADC
Sbjct: 354 SLVGETLNEYLEQNPQVADTIIEKAVQAYKAAEAARRARDLVRRKSVLESSPLPGKLADC 413
Query: 492 SSTTPEESEIFIVEGDSAGG 511
S PE+SEI+IVEGDSAGG
Sbjct: 414 SERDPEKSEIYIVEGDSAGG 433
>gi|434386573|ref|YP_007097184.1| DNA gyrase, B subunit [Chamaesiphon minutus PCC 6605]
gi|428017563|gb|AFY93657.1| DNA gyrase, B subunit [Chamaesiphon minutus PCC 6605]
Length = 645
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 265/465 (56%), Positives = 353/465 (75%), Gaps = 10/465 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ YG + I+VLEGLEAVR RP MYIGSTGP+GLHHLVYE+ DN++DEA AG+ NI++
Sbjct: 1 MTSDYGDDNIRVLEGLEAVRVRPGMYIGSTGPKGLHHLVYEVADNSIDEALAGHCKNIDI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
++ A+ SV+V D+GRGIP ++P T KS +ETVLTVLHAGGKFG GY+VSGGLHGVG
Sbjct: 61 SINANGSVTVIDDGRGIPAGINPQTGKSTIETVLTVLHAGGKFG--DGGYTVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS +EV VWR+ + Q++ +G V+ L V+P ++R GT + F PD ++
Sbjct: 119 ISVVNALSSHVEVKVWRNQKIHTQRFEKGFAVSGL--EVMP-SPENRTGTTVTFQPDPEI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 309
F + +FD T+A R +ELA+LN + I+ R E ++ + Y+F GG+ EYV +
Sbjct: 176 FKESTEFDFATLASRFKELAYLNAGIRISFSDYRLELLGTDEPKVENYYFEGGIREYVSY 235
Query: 310 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
LN +K+PLH+ ++ ++ D + +++ALQWC DAYSD +LG+AN+IRTIDGGTH++G+K
Sbjct: 236 LNENKQPLHEEIIYISQEQDKVQVEVALQWCVDAYSDNILGFANNIRTIDGGTHLDGLKV 295
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTRT+NS+ +K +K+ D +L GE++REGLT I+SV+VPNPEFEGQTKT+LGN EVRK
Sbjct: 296 VLTRTMNSIARKRNKLKEGDANLGGENIREGLTAIVSVKVPNPEFEGQTKTKLGNTEVRK 355
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+VD V E LTEYLE P++ D+IL K++ A AA AA+RA++LVR+KSVL SS+LPGKL
Sbjct: 356 IVDSIVSEALTEYLEFRPNIADAILDKAIQAFNAAEAARRAKELVRRKSVLESSTLPGKL 415
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCSS P ESEIFIVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 416 ADCSSKDPSESEIFIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 459
>gi|425456642|ref|ZP_18836348.1| DNA gyrase subunit B [Microcystis aeruginosa PCC 9807]
gi|389802205|emb|CCI18712.1| DNA gyrase subunit B [Microcystis aeruginosa PCC 9807]
Length = 888
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 266/440 (60%), Positives = 341/440 (77%), Gaps = 8/440 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IEV
Sbjct: 1 MTSNYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ AD SVSV D+GRGIP D+HP T KSALETVLT+LHAGGKFG S GY VSGGLHGVG
Sbjct: 61 DIKADGSVSVTDDGRGIPTDVHPTTGKSALETVLTILHAGGKFG--SGGYKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS ++VTVWRD + Q+Y RG PVT L V +++ GTR+ F PD ++
Sbjct: 119 ISVVNALSAWVDVTVWRDHKVHIQRYERGIPVTEL---VSSPSQEEKTGTRVNFLPDTEI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F+ I+FD++T++GR+RELA+LN + I D PE+ Y + GG++EYV ++
Sbjct: 176 FSQGIEFDYSTLSGRLRELAYLNAGVKITF--SDYRPEEPHIETYCYEGGIKEYVAYMCR 233
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K+ LH D++ + +GI I++A QWC DAYSD +LG+AN+IRTIDGGTH+EG+KA LT
Sbjct: 234 EKETLHKDIIYVSGEKNGINIEVAFQWCIDAYSDNILGFANNIRTIDGGTHLEGLKAVLT 293
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RTLN++ +K +K+ + +L+GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD
Sbjct: 294 RTLNNVARKRNKIKENEPNLAGENVREGLTAVISVKVPEPEFEGQTKTKLGNTEVRGIVD 353
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E L EYLE +P V D+I+ K++ A KAA AA+RARDLVR+KSVL SS LPGKLADC
Sbjct: 354 SLVGETLNEYLEQNPQVADTIIEKAVQAYKAAEAARRARDLVRRKSVLESSPLPGKLADC 413
Query: 492 SSTTPEESEIFIVEGDSAGG 511
S PE+SEI+IVEGDSAGG
Sbjct: 414 SERDPEKSEIYIVEGDSAGG 433
>gi|425459471|ref|ZP_18838957.1| DNA gyrase subunit B [Microcystis aeruginosa PCC 9808]
gi|389822774|emb|CCI29483.1| DNA gyrase subunit B [Microcystis aeruginosa PCC 9808]
Length = 1075
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 266/437 (60%), Positives = 338/437 (77%), Gaps = 8/437 (1%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IEV +
Sbjct: 4 NYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEVDIK 63
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
AD SVSV D+GRGIP D+HP T KSALETVLT+LHAGGKFG S GY VSGGLHGVG+SV
Sbjct: 64 ADGSVSVTDDGRGIPTDVHPTTGKSALETVLTILHAGGKFG--SGGYKVSGGLHGVGISV 121
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS ++VTVWRD + Q+Y RG PVT L V +++ GTR+ F PD ++F+
Sbjct: 122 VNALSAWVDVTVWRDHKVHIQRYERGIPVTEL---VSSPSQEEKTGTRVNFLPDTEIFSQ 178
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
I+FD++T++GR+RELA+LN + I D PE+ Y + GG++EYV ++ +K+
Sbjct: 179 GIEFDYSTLSGRLRELAYLNAGVKITF--SDYRPEEPHIETYCYEGGIKEYVAYMCREKE 236
Query: 316 PLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
LH D++ + GI I++A QWC DAYSD +LG+AN+IRTIDGGTH+EG+KA LTRTL
Sbjct: 237 TLHKDIIYVSGEKTGINIEVAFQWCIDAYSDNILGFANNIRTIDGGTHLEGLKAVLTRTL 296
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N++ +K +K+ + +L+GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD V
Sbjct: 297 NNVARKRNKIKENEPNLAGENVREGLTAVISVKVPEPEFEGQTKTKLGNTEVRGIVDSLV 356
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E L EYLE +P V D+I+ K++ A KAA AA+RARDLVR+KSVL SS LPGKLADCS
Sbjct: 357 GETLNEYLEQNPQVADTIIEKAVQAYKAAEAARRARDLVRRKSVLESSPLPGKLADCSER 416
Query: 495 TPEESEIFIVEGDSAGG 511
PE+SEI+IVEGDSAGG
Sbjct: 417 DPEKSEIYIVEGDSAGG 433
>gi|443477130|ref|ZP_21066998.1| DNA gyrase subunit B [Pseudanabaena biceps PCC 7429]
gi|443017788|gb|ELS32155.1| DNA gyrase subunit B [Pseudanabaena biceps PCC 7429]
Length = 646
Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust.
Identities = 270/467 (57%), Positives = 349/467 (74%), Gaps = 7/467 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V++TY + QIQVLEGLEAVRKRP MYIG+TGP+GLHHLV+E++DN+VDEA AG+ I V
Sbjct: 5 VTETYNANQIQVLEGLEAVRKRPGMYIGTTGPKGLHHLVFEVVDNSVDEALAGHCDRILV 64
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
LL D SV V+DNGRGIP D HP T KSALETVLTVLHAGGKFG GY VSGGLHGVG
Sbjct: 65 ELLPDGSVCVSDNGRGIPTDTHPKTGKSALETVLTVLHAGGKFG--DGGYKVSGGLHGVG 122
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EV+VWR Y Q+Y RG PVT L + R+GT++RF PD Q+
Sbjct: 123 ISVVNALSEWVEVSVWRLEKVYKQRYERGFPVTELIASK-SEEPIQRRGTQVRFKPDAQI 181
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FTT +F+++ +A R++ELA+LN + I D + + + Y + GG+ EYV ++
Sbjct: 182 FTTQTEFEYDILASRLKELAYLNAGVKIEF--SDRRGTEVRTDIYCYEGGIREYVAYMTR 239
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K+ +H D++ + D + +++ALQWC D+Y+D +LG+AN+IRTIDGGTH+EG+K LT
Sbjct: 240 EKEAIHPDIIYVNGERDNVVVEVALQWCIDSYNDNVLGFANNIRTIDGGTHLEGLKTVLT 299
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RT+N+ ++ K +K+ + +L+GE+VREGLT +ISV+V +PEFEGQTKT+LGN EVR +VD
Sbjct: 300 RTINATARRLKKIKEGESNLAGENVREGLTAVISVKVTDPEFEGQTKTKLGNTEVRGIVD 359
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E L EYLE HP V SI+ K+L A AA AA+RAR+LVR+KS L SS+LPGKLADC
Sbjct: 360 SFVGEVLNEYLEFHPAVATSIIEKALQAFNAAEAARRARELVRRKSALESSTLPGKLADC 419
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SS P+ESEIFIVEGDSAGGSAKQGRDR +Q I+ PL+ + A
Sbjct: 420 SSRDPKESEIFIVEGDSAGGSAKQGRDRHYQAIL-PLRGKVLNIERA 465
>gi|186686392|ref|YP_001869588.1| DNA gyrase subunit B [Nostoc punctiforme PCC 73102]
gi|186468844|gb|ACC84645.1| DNA gyrase, B subunit [Nostoc punctiforme PCC 73102]
Length = 645
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 277/469 (59%), Positives = 359/469 (76%), Gaps = 18/469 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIG+TGPRGLHHLVYE++DN++DEA AG+ ++IEV
Sbjct: 1 MTSSYSADQIQVLEGLEAVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGHCTHIEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ AD SV+V D+GRGIP+D H T KSALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 DINADGSVTVTDDGRGIPVDTHSRTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTVWRD + Q+Y RG PVT L + R GT + F PD Q+
Sbjct: 119 ISVVNALSEVVEVTVWRDKKVHLQRYERGIPVTELQTKPY---KEARTGTSVTFKPDTQI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIA-------LRKEDSDPEKNQYNEYFFAGGLEE 305
FTT+I+FD+ T++GR+RELA+LN + I L K D+ P+ YN + GG++E
Sbjct: 176 FTTSIEFDYITLSGRLRELAYLNAGVKITFTDNRLELLKSDT-PKVESYN---YKGGIKE 231
Query: 306 YVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 364
Y+ ++N +K+PLH+ ++ + + + + ++++LQWC+DAY+D +LG+AN+IRT+DGGTH+E
Sbjct: 232 YIAYMNREKQPLHEEIIYVQGERNNVQVEVSLQWCTDAYTDNVLGFANNIRTVDGGTHLE 291
Query: 365 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 424
G+KA LTRTLN++ +K +K+ + +LSGEHVREGLT +ISV+VP+PEFEGQTKT+LGN
Sbjct: 292 GLKAVLTRTLNAIARKRNKIKENEPNLSGEHVREGLTAVISVKVPDPEFEGQTKTKLGNT 351
Query: 425 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 484
EVR +VD V E LTEYLE HP + DSIL K++ A KAA AA+ AR+LVR+KSVL SS L
Sbjct: 352 EVRGIVDSLVGEVLTEYLEFHPAIADSILDKAIQAFKAAEAARHARELVRRKSVLESSPL 411
Query: 485 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
PGKLADCSS P ESEIFIVEGDSAGGSAKQGRDRR Q I+ PL+ I
Sbjct: 412 PGKLADCSSRDPSESEIFIVEGDSAGGSAKQGRDRRTQAIL-PLRGKIL 459
>gi|427729923|ref|YP_007076160.1| DNA gyrase subunit B [Nostoc sp. PCC 7524]
gi|427365842|gb|AFY48563.1| DNA gyrase, B subunit [Nostoc sp. PCC 7524]
Length = 645
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 277/465 (59%), Positives = 351/465 (75%), Gaps = 10/465 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN++DEA AGY +++E+
Sbjct: 1 MTSSYSADQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHVEI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L AD SV+V D+GRGIP D H T KSALETVLTVLHAGGKFGG S LHGVG
Sbjct: 61 DLNADGSVTVTDDGRGIPTDTHSRTGKSALETVLTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTVWRD + Q+Y RG PVT L + R GT + F PD Q+
Sbjct: 119 ISVVNALSEVVEVTVWRDKKVHTQRYERGVPVTELIAKPY---KEARTGTSVTFKPDVQI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 309
FTT +FD+ T+A R+RELA+LN + I R E E + Y + GG+ EY+ +
Sbjct: 176 FTTGTEFDYLTLANRLRELAYLNAGVKITFTDNRLELLKSETPKVEVYEYKGGIREYIAY 235
Query: 310 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+N +K+PLH+ ++ + + + + +++ALQWC+DAY+D +LG+AN+IRT+DGGTH+EG+KA
Sbjct: 236 MNREKQPLHEEIIYVQGERNNVQVEVALQWCTDAYTDNVLGFANNIRTVDGGTHLEGLKA 295
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTRTLN++ +K +K+ D +LSGEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTLNAIARKRNKLKENDSNLSGEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+VD V E LTEYLE HP + DS+L K++ A KAA AA+ AR+LVR+KSVL SS LPGKL
Sbjct: 356 IVDSLVGEVLTEYLEFHPSIADSVLDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKL 415
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCSS P ESEIFIVEGDSAGGSAKQGRDRR Q I+ PL+ I
Sbjct: 416 ADCSSRDPGESEIFIVEGDSAGGSAKQGRDRRTQAIL-PLRGKIL 459
>gi|119512311|ref|ZP_01631397.1| DNA topoisomerase IV subunit B [Nodularia spumigena CCY9414]
gi|119463024|gb|EAW43975.1| DNA topoisomerase IV subunit B [Nodularia spumigena CCY9414]
Length = 645
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 277/465 (59%), Positives = 353/465 (75%), Gaps = 10/465 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIG+TGPRGLHHLVYE++DN++DEA AG+ ++IEV
Sbjct: 1 MTSSYSADQIQVLEGLEAVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGHCTHIEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ AD SV+V D+GRGIP D H T KSALETVLTVLHAGGKFGG S LHGVG
Sbjct: 61 DINADGSVTVTDDGRGIPTDTHSRTGKSALETVLTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
LSVVNALS+ LEVTVWRD + Q+Y RG PVT L D + + GT I F PD Q+
Sbjct: 119 LSVVNALSDVLEVTVWRDNKVHVQRYERGVPVTELQA---KPDKEGKTGTSINFKPDSQI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 309
F +++FD+ TIAGR+RELA+LN + I R E + + Y + GG++EY+ +
Sbjct: 176 FINSVEFDYITIAGRLRELAYLNAGVKIIFGDHRLELLKSDTPRIETYEYKGGIKEYIAY 235
Query: 310 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+N DK+PLH+ ++ + + + ++++LQWC+DAY+D +LG+AN+IRTIDGGTH+EG+KA
Sbjct: 236 MNRDKQPLHEEIIYVHGERNNVQVEVSLQWCTDAYTDNVLGFANNIRTIDGGTHLEGLKA 295
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTRTLN++ +K +K+ + +LSGEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTLNAIARKRNKIKENESNLSGEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+VD V E L+EYLE HP + DSIL K++ A KAA AA+ AR+LVR+KSVL SS LPGKL
Sbjct: 356 IVDSLVGEVLSEYLEFHPGIADSILDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKL 415
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCSS P ESEIFIVEGDSAGGSAKQGRDRR Q I+ PL+ I
Sbjct: 416 ADCSSRDPSESEIFIVEGDSAGGSAKQGRDRRTQAIL-PLRGKIL 459
>gi|428309704|ref|YP_007120681.1| DNA gyrase subunit B [Microcoleus sp. PCC 7113]
gi|428251316|gb|AFZ17275.1| DNA gyrase subunit B [Microcoleus sp. PCC 7113]
Length = 642
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 276/463 (59%), Positives = 357/463 (77%), Gaps = 10/463 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN++DEA AGY ++IE+
Sbjct: 1 MTSSYSADQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHIEI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ AD SV+V D+GRGIP D HP T KSALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 DINADGSVTVTDDGRGIPTDTHPTTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTVWR+ + Q+Y RG PVT L + + R GT + F PD Q+
Sbjct: 119 ISVVNALSEWVEVTVWRENRIHTQRYERGIPVTEL---IGKPSKEARTGTSVSFKPDTQI 175
Query: 253 F-TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLN 311
F TT I+FD+ T+AGR+RELA+LN + I D+ E+ + Y++ GG++EYV ++N
Sbjct: 176 FVTTGIEFDYTTLAGRVRELAYLNAGVRITF--TDNRLEQPRQETYYYEGGIQEYVAYMN 233
Query: 312 TDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 370
+K+PLH +++ + + +G +++ALQWC DAYSD +LG+AN+IRTIDGGTH+EG+KA L
Sbjct: 234 REKEPLHQEIIYIQGERNGTQVEVALQWCVDAYSDNLLGFANNIRTIDGGTHLEGLKAVL 293
Query: 371 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
TRT+N++ +K +K+ + +L GE+VREGLT +ISV+VP+PEFEGQTKT+LGN EVR +V
Sbjct: 294 TRTMNAIARKRNKIKEGEPNLGGENVREGLTGVISVKVPDPEFEGQTKTKLGNTEVRGIV 353
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
+ V E LTEYLE P+V D++L K++ A KAA AA+RARDLVR+KSVL SS LPGKLAD
Sbjct: 354 ESLVGEVLTEYLEFRPNVADAVLDKAIQAFKAAEAARRARDLVRRKSVLESSPLPGKLAD 413
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
CSS P ESEIFIVEGDSAGGSAKQGRDR+FQ I+ PL+ I
Sbjct: 414 CSSRDPSESEIFIVEGDSAGGSAKQGRDRQFQAIL-PLRGKIL 455
>gi|428771456|ref|YP_007163246.1| DNA gyrase subunit B [Cyanobacterium aponinum PCC 10605]
gi|428685735|gb|AFZ55202.1| DNA gyrase subunit B [Cyanobacterium aponinum PCC 10605]
Length = 649
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 277/461 (60%), Positives = 349/461 (75%), Gaps = 8/461 (1%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S Y +EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN++DEA AGY ++IE+
Sbjct: 10 SSNYDAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHIEID 69
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
L AD SVSV D+GRGIP D+HP T KSALETV+TVLHAGGKFGG S LHGVG+
Sbjct: 70 LNADGSVSVTDDGRGIPTDIHPRTKKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGI 127
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE ++VTVWR + Q+Y RGKP+T L D+ GT + F PD Q+F
Sbjct: 128 SVVNALSEWVQVTVWRKDKVHTQRYERGKPITDLETK--DNDTGHSTGTSVSFLPDNQIF 185
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +FD+N ++ R+RELA+LN + I + PE+ + Y + GG++EYV ++ +
Sbjct: 186 TETTEFDYNLLSNRLRELAYLNAGVKITFTDKRVTPEREE--TYCYEGGIKEYVTYMTRE 243
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ LH D++ + +G+ +++ALQWC DAYSDT+LG+AN+IRTIDGGTH+EG+K LTR
Sbjct: 244 KEVLHQDIIYTSGEKNGVQVEVALQWCIDAYSDTILGFANNIRTIDGGTHLEGLKTVLTR 303
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
TLN++G+K +K+ D +L GE+VREGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD
Sbjct: 304 TLNNIGRKRNKIKENDSNLGGENVREGLTAVISVKVPDPEFEGQTKTKLGNSEVRGIVDS 363
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
V E L EYLE +P V DSI+ K++ A KAA AA+RAR+LVR+KSVL SS LPGKLADCS
Sbjct: 364 LVGEALNEYLEFNPHVADSIIEKAIQAFKAAEAARRARELVRRKSVLESSPLPGKLADCS 423
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
S P ESEIF+VEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 424 SRDPAESEIFLVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 463
>gi|75908731|ref|YP_323027.1| DNA gyrase subunit B [Anabaena variabilis ATCC 29413]
gi|75702456|gb|ABA22132.1| DNA gyrase subunit B [Anabaena variabilis ATCC 29413]
Length = 645
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 278/465 (59%), Positives = 356/465 (76%), Gaps = 10/465 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN++DEA AGY ++IEV
Sbjct: 1 MTSSYSADQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHIEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ AD SV+V D+GRGIP D H T KSALETV+TVLHAGGKFGG VSGGLHGVG
Sbjct: 61 DINADGSVTVTDDGRGIPTDTHSRTGKSALETVMTVLHAGGKFGGGGY--KVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTVWRD + Q+Y RG PVT L + R GT + F PD Q+
Sbjct: 119 ISVVNALSEVVEVTVWRDKKVHIQRYERGIPVTELIAKPY---KEARTGTSVSFKPDSQI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 309
FT +I+FD+ T++ R+RELA+LN + I R E + + Y + GG++EY+ +
Sbjct: 176 FTNSIEFDYITLSSRLRELAYLNAGVKITFTDNRLELLKSDTPKVESYEYKGGIKEYIAY 235
Query: 310 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+N DK+PLH+ ++ + + + + I+++LQWC+DAY+D +LG+AN+IRTIDGGTH+EG+KA
Sbjct: 236 MNRDKQPLHEEIIYVQGERNNVQIEVSLQWCTDAYTDNVLGFANNIRTIDGGTHLEGLKA 295
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTRTLN++ +K +K+ + +LSGEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTLNTIARKRNKIKENEANLSGEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+VD V E LTEYLE HP + D+IL K++ A KAA AA+ AR+LVR+KSVL SS LPGKL
Sbjct: 356 IVDSLVGEVLTEYLEFHPGIADAILDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKL 415
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCSS P ESEI+IVEGDSAGGSAKQGRDRR Q I+ PL+ I
Sbjct: 416 ADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRTQAIL-PLRGKIL 459
>gi|428203405|ref|YP_007081994.1| DNA gyrase subunit B [Pleurocapsa sp. PCC 7327]
gi|427980837|gb|AFY78437.1| DNA gyrase, B subunit [Pleurocapsa sp. PCC 7327]
Length = 642
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 277/462 (59%), Positives = 352/462 (76%), Gaps = 11/462 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+EQIQVLEGL+ VRKRP MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IEV
Sbjct: 4 TSNYGAEQIQVLEGLDPVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEVD 63
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ +D SV+V DNGRGIP D HP T KSALETV+TVLHAGGKFGG S LHGVG+
Sbjct: 64 INSDGSVTVTDNGRGIPTDTHPTTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGI 121
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE ++VTVWRD + Q+Y RG PVT L + + ++R GT I F PD Q+F
Sbjct: 122 SVVNALSEWVKVTVWRDNKVHTQRYERGIPVTELE---IKPEKEERTGTSITFLPDLQIF 178
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALR-KEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
T I+FD++T+AGR++ELA+LN + I K S+P Y + GG++EYV ++
Sbjct: 179 TGGIEFDYSTLAGRLKELAYLNAGVKITFSDKRGSEP---HVETYCYEGGIKEYVAYMCR 235
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K+PLH D++ + +GI +++A+QWC DAYSD +LG+AN+IRTIDGGTH+EG+K LT
Sbjct: 236 EKQPLHQDIIYVSGEKNGIQLEVAMQWCVDAYSDNLLGFANNIRTIDGGTHLEGLKTVLT 295
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RTLN++ +K +KD + +L+GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD
Sbjct: 296 RTLNNVARKRNKIKDNEPNLAGENVREGLTGVISVKVPEPEFEGQTKTKLGNTEVRGIVD 355
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
E L EYLE HP V D+I+ K++ A KAA AA+RAR+LVR+KSVL SS LPGKLADC
Sbjct: 356 SIAGEALNEYLEFHPQVADAIIEKAVQAFKAAEAARRARELVRRKSVLESSPLPGKLADC 415
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
SS P ESEIF+VEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 416 SSRDPSESEIFLVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 456
>gi|443318324|ref|ZP_21047579.1| DNA gyrase, B subunit [Leptolyngbya sp. PCC 6406]
gi|442782062|gb|ELR92147.1| DNA gyrase, B subunit [Leptolyngbya sp. PCC 6406]
Length = 646
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 278/465 (59%), Positives = 359/465 (77%), Gaps = 10/465 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ YG++QIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DNAVDEA AGY S+IEV
Sbjct: 1 MATNYGADQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNAVDEALAGYCSHIEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L A+ SVSV+D+GRGIP D+HP T KSALETVLTVLHAGGKFGG S LHGVG
Sbjct: 61 TLNANGSVSVSDDGRGIPTDIHPRTGKSALETVLTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTVWR+ ++ Q++ RG + L +P D+ R+GT + F PD +
Sbjct: 119 ISVVNALSEWVEVTVWREQRKHTQRFERGVSMGDLQS--VP-DNSGRRGTLVSFSPDATI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIA---LRKEDSDPEKNQYNEYFFAGGLEEYVQW 309
FTT +F++ TI+ R+RELA+LN + + LR + ++ + +++ GG+ EYV +
Sbjct: 176 FTTGTEFEYGTISNRLRELAYLNAGVDVTFTDLRLDVLKSDQPLVSRFYYEGGIREYVAY 235
Query: 310 LNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+N DK+PLH D++ + + DG+ ++ ALQWC DAYSD +LG+AN+IRTIDGGTH+EG+KA
Sbjct: 236 INNDKQPLHEDIIHVQSEKDGVQVEAALQWCVDAYSDNLLGFANNIRTIDGGTHLEGLKA 295
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTRTLN+L +K KD + +LSGE++REGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTLNTLARKRSKRKDGESNLSGENIREGLTGVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+V+ + E LTEYL+ HP++ D+IL K++ A AA AA+RAR+LVR+KSVL SS+LPGKL
Sbjct: 356 IVESVIGETLTEYLDFHPNIGDAILDKAIQAFNAAEAARRARELVRRKSVLESSTLPGKL 415
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCSS P ESEIFIVEGDSAGGSAKQGRDR+FQ I+ PL+ I
Sbjct: 416 ADCSSRDPSESEIFIVEGDSAGGSAKQGRDRKFQAIL-PLRGKIL 459
>gi|428303880|ref|YP_007140705.1| DNA gyrase subunit B [Crinalium epipsammum PCC 9333]
gi|428245415|gb|AFZ11195.1| DNA gyrase subunit B [Crinalium epipsammum PCC 9333]
Length = 646
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 272/465 (58%), Positives = 357/465 (76%), Gaps = 10/465 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIG+TGPRGLHHLVYE++DN++DEA AG+ ++IEV
Sbjct: 1 MTSSYSADQIQVLEGLEAVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGHCTHIEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ AD SVSV D+GRGIP D+H T KSALETV+T+LHAGGKFGG S LHGVG
Sbjct: 61 QINADGSVSVTDDGRGIPTDIHSRTGKSALETVMTILHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTVWRD E++Q++ RG P+ L P+ ++R GT I F PD ++
Sbjct: 119 ISVVNALSEWVEVTVWRDKKEHNQRFERGIPIGELKAQ--PI-KENRTGTSICFKPDTEI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKN---QYNEYFFAGGLEEYVQW 309
FT +I+FD+ TI+GR+RELA+LN + I + KN + Y + GG+ EY+ +
Sbjct: 176 FTVSIEFDYTTISGRLRELAYLNAGVKITFSDQRIHLLKNNEPKVETYCYEGGIREYITY 235
Query: 310 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+NT+K+PLH+ V+ + + + + +++ALQWC DAYSD +LG+AN+IRTIDGGTH+EG+KA
Sbjct: 236 MNTEKQPLHEEVIYIQGERNNVQVEVALQWCVDAYSDNLLGFANNIRTIDGGTHLEGLKA 295
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTRT+N+ +K +K+ D +L GE++REGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTMNTTARKRNKLKEADSNLGGENIREGLTGVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+VD V E TEYL+ HP+V D+IL K++ A AA AA+RAR+LVR+KSVL SS LPGKL
Sbjct: 356 IVDSLVGEIFTEYLDFHPNVADAILEKAIQAFNAAEAARRARELVRRKSVLESSPLPGKL 415
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCS+ P ESEI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 416 ADCSTKDPTESEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 459
>gi|354567214|ref|ZP_08986384.1| DNA gyrase, B subunit [Fischerella sp. JSC-11]
gi|353543515|gb|EHC12973.1| DNA gyrase, B subunit [Fischerella sp. JSC-11]
Length = 645
Score = 523 bits (1347), Expect = e-146, Method: Compositional matrix adjust.
Identities = 278/465 (59%), Positives = 351/465 (75%), Gaps = 10/465 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y +EQIQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN++DEA AGY +++EV
Sbjct: 1 MTSSYSAEQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHVEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L AD SV+V D+GRGIP + T KS LETVLTVLHAGGKFGG S LHGVG
Sbjct: 61 DLNADGSVTVTDDGRGIPTGIVAKTGKSGLETVLTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTVWRD + Q+Y RG PVT L V P R GT + F PD Q+
Sbjct: 119 ISVVNALSEWVEVTVWRDKKVHTQRYERGIPVTELI--VKPYKDH-RTGTSVSFLPDSQI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 309
FTT +FD T+A R+RELA+LN + I R + ++ + Y + GG+ EY+ +
Sbjct: 176 FTTGTEFDFTTLASRLRELAYLNAGVKITFTDHRLQLLKSDQPKVETYEYKGGIREYITY 235
Query: 310 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+N DK+PLH+ V+ + + + + +++ALQWC+DAY+D +LG+AN+IRT+DGGTH+EG+KA
Sbjct: 236 INADKQPLHEEVIYVQGERNNVQVEVALQWCTDAYTDNILGFANNIRTVDGGTHLEGLKA 295
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTRTLN++ +K +KD + +LSGEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTLNAIARKRNKLKDSEPNLSGEHVREGLTGVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+VD V E LTEYLE HP V D+IL K++ A KAA AA+ AR+LVR+KSVL SS LPGKL
Sbjct: 356 IVDSLVGETLTEYLEFHPSVADAILDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKL 415
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCSS P ESEI++VEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 416 ADCSSRDPRESEIYLVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 459
>gi|376006244|ref|ZP_09783547.1| DNA gyrase subunit B [Arthrospira sp. PCC 8005]
gi|375325373|emb|CCE19300.1| DNA gyrase subunit B [Arthrospira sp. PCC 8005]
Length = 645
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 282/466 (60%), Positives = 356/466 (76%), Gaps = 12/466 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ TY ++QIQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AGY ++IEV
Sbjct: 1 MTSTYSADQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGYCTHIEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNSV V D+GRGIPID H T +SALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 EINPDNSVRVTDDGRGIPIDTHSKTGRSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQ-GTRIRFWPDKQ 251
+SVVNALSE +EVTV RD Y Q+Y RG PVT L H SK+ Q GT + F PD +
Sbjct: 119 ISVVNALSEWVEVTVLRDHKRYVQRYERGVPVTELEEH----SSKETQTGTSVCFKPDTK 174
Query: 252 VFTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQ 308
+FTT I+F+++TIA R+RELA+LN + I L R E E+ + Y + GG++EYV
Sbjct: 175 IFTTGIEFEYDTIASRLRELAYLNAGVRITLTDNRLELLKREEAKVESYCYEGGIKEYVT 234
Query: 309 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
++N +K+ LH D + + + + +++ALQWC DAYSDT+LG+AN+IRT+DGGTH+EG+K
Sbjct: 235 YMNREKQALHEDTIYVSGERNNVQVEVALQWCVDAYSDTILGFANNIRTVDGGTHLEGLK 294
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
LTRT+N++ +K +KD + +L GE+VREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 295 TVLTRTMNAIARKRNKIKDNEPNLGGENVREGLTGVISVKVPDPEFEGQTKTKLGNTEVR 354
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
+VD V E LTE+L+ +P+V D+IL K++ A KAA AA+RARDLVR+KSVL SS LPGK
Sbjct: 355 GIVDSLVGEVLTEFLDFNPNVADAILEKAIQAFKAAEAARRARDLVRRKSVLESSPLPGK 414
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LADCSS PEESEIF+VEGDSAGGSAKQGRDRR Q I+ PL+ I
Sbjct: 415 LADCSSRDPEESEIFLVEGDSAGGSAKQGRDRRTQAIL-PLRGKIL 459
>gi|409993293|ref|ZP_11276439.1| DNA gyrase subunit B [Arthrospira platensis str. Paraca]
gi|291569892|dbj|BAI92164.1| DNA gyrase B subunit [Arthrospira platensis NIES-39]
gi|409935828|gb|EKN77346.1| DNA gyrase subunit B [Arthrospira platensis str. Paraca]
Length = 645
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 282/466 (60%), Positives = 356/466 (76%), Gaps = 12/466 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ TY ++QIQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AGY ++IEV
Sbjct: 1 MTSTYSADQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGYCTHIEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNSV V D+GRGIPID H T +SALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 DINPDNSVRVTDDGRGIPIDTHSKTGRSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQ-GTRIRFWPDKQ 251
+SVVNALSE +EVTV RD Y Q+Y RG PVT L H SK+ Q GT + F PD +
Sbjct: 119 ISVVNALSEWVEVTVLRDHKRYVQRYERGVPVTELEEH----SSKESQTGTSVCFKPDTK 174
Query: 252 VFTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQ 308
+FTT I+F+++TIA R+RELA+LN + I L R E E+ + Y + GG++EYV
Sbjct: 175 IFTTGIEFEYDTIASRLRELAYLNAGVRITLTDNRLELLKREEAKVESYCYEGGIKEYVT 234
Query: 309 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
++N +K+ LH D + + + + +++ALQWC DAYSDT+LG+AN+IRT+DGGTH+EG+K
Sbjct: 235 YMNREKQALHEDTIYVSGERNNVQVEVALQWCVDAYSDTILGFANNIRTVDGGTHLEGLK 294
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
LTRT+N++ +K +KD + +L GE+VREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 295 TVLTRTMNAIARKRNKIKDNEPNLGGENVREGLTGVISVKVPDPEFEGQTKTKLGNTEVR 354
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
+VD V E LTE+L+ +P+V D+IL K++ A KAA AA+RARDLVR+KSVL SS LPGK
Sbjct: 355 GIVDSLVGEVLTEFLDFNPNVADAILEKAIQAFKAAEAARRARDLVRRKSVLESSPLPGK 414
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LADCSS PEESEIF+VEGDSAGGSAKQGRDRR Q I+ PL+ I
Sbjct: 415 LADCSSRDPEESEIFLVEGDSAGGSAKQGRDRRTQAIL-PLRGKIL 459
>gi|209525244|ref|ZP_03273786.1| DNA gyrase, B subunit [Arthrospira maxima CS-328]
gi|423065151|ref|ZP_17053941.1| DNA topoisomerase IV subunit B [Arthrospira platensis C1]
gi|209494259|gb|EDZ94572.1| DNA gyrase, B subunit [Arthrospira maxima CS-328]
gi|406713283|gb|EKD08454.1| DNA topoisomerase IV subunit B [Arthrospira platensis C1]
Length = 645
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 281/466 (60%), Positives = 356/466 (76%), Gaps = 12/466 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ TY ++QIQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AGY ++IEV
Sbjct: 1 MTSTYSADQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGYCTHIEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNSV V D+GRGIPID H T +SALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 EINPDNSVRVTDDGRGIPIDTHSKTGRSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQ-GTRIRFWPDKQ 251
+SVVNALSE +EVTV RD Y Q+Y RG PVT + H SK+ Q GT + F PD +
Sbjct: 119 ISVVNALSEWVEVTVLRDHKRYVQRYERGVPVTEVKEH----SSKETQTGTSVCFKPDTK 174
Query: 252 VFTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQ 308
+FTT I+F+++TIA R+RELA+LN + I L R E E+ + Y + GG++EYV
Sbjct: 175 IFTTGIEFEYDTIASRLRELAYLNAGVRITLTDNRLELLKREEAKVESYCYEGGIKEYVT 234
Query: 309 WLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
++N +K+ LH D + + + + +++ALQWC DAYSDT+LG+AN+IRT+DGGTH+EG+K
Sbjct: 235 YMNREKQALHEDTIYVSGERNNVQVEVALQWCVDAYSDTILGFANNIRTVDGGTHLEGLK 294
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
LTRT+N++ +K +KD + +L GE+VREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 295 TVLTRTMNAIARKRNKIKDNEPNLGGENVREGLTGVISVKVPDPEFEGQTKTKLGNTEVR 354
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
+VD V E LTE+L+ +P+V D+IL K++ A KAA AA+RARDLVR+KSVL SS LPGK
Sbjct: 355 GIVDSLVGEVLTEFLDFNPNVADAILEKAIQAFKAAEAARRARDLVRRKSVLESSPLPGK 414
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LADCSS PEESEIF+VEGDSAGGSAKQGRDRR Q I+ PL+ I
Sbjct: 415 LADCSSRDPEESEIFLVEGDSAGGSAKQGRDRRTQAIL-PLRGKIL 459
>gi|172035674|ref|YP_001802175.1| DNA gyrase subunit B [Cyanothece sp. ATCC 51142]
gi|354554914|ref|ZP_08974217.1| DNA gyrase, B subunit [Cyanothece sp. ATCC 51472]
gi|171697128|gb|ACB50109.1| DNA gyrase B subunit [Cyanothece sp. ATCC 51142]
gi|353553068|gb|EHC22461.1| DNA gyrase, B subunit [Cyanothece sp. ATCC 51472]
Length = 642
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 276/458 (60%), Positives = 346/458 (75%), Gaps = 9/458 (1%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IE+ +
Sbjct: 7 YGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEIDINP 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV+V D+GRGIP D+HP+T KSALETV+TVLHAGGKFGG S LHGVG+SVV
Sbjct: 67 DGSVTVTDDGRGIPTDIHPSTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE + V VWRD + Q+Y RG P+T L D GT I F PDK++FT
Sbjct: 125 NALSEWVIVKVWRDDEVHTQRYERGIPITNLETKP---DKNHSTGTSISFLPDKKIFTVG 181
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
I+FD++T+AGR+RELA+LN + I D+ E+ Y + GG++EYV ++ DK P
Sbjct: 182 IEFDYSTLAGRLRELAYLNAGVRITF--TDNRKEEPHVESYCYEGGIKEYVTYMCRDKDP 239
Query: 317 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LH D++ + +G +++AL WC DAYSD +LG+AN+IRTIDGGTH+EG+K LTRT+N
Sbjct: 240 LHQDIIFVSGEKNGTQVEVALLWCVDAYSDNLLGFANNIRTIDGGTHLEGLKTVLTRTMN 299
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
++ +K +KD D +L GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD V
Sbjct: 300 NVARKRNKLKDNDANLGGENVREGLTGVISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVG 359
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E LTEYLE +P V DSI+ K++ A KAA AA+RAR+LVR+KSVL SS LPGKLADCS+
Sbjct: 360 EVLTEYLEFNPHVADSIIEKAVQAFKAAEAARRARELVRRKSVLESSPLPGKLADCSTRD 419
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
PEESEIF+VEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 420 PEESEIFLVEGDSAGGSAKQGRDRRFQAIL-PLRGKII 456
>gi|434405383|ref|YP_007148268.1| DNA gyrase subunit B [Cylindrospermum stagnale PCC 7417]
gi|428259638|gb|AFZ25588.1| DNA gyrase subunit B [Cylindrospermum stagnale PCC 7417]
Length = 646
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 273/465 (58%), Positives = 354/465 (76%), Gaps = 10/465 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIG+TGPRGLHHLVYE++DN+VDEA AG+ +++EV
Sbjct: 1 MTSSYSADQIQVLEGLEAVRKRPGMYIGTTGPRGLHHLVYEVVDNSVDEALAGHCTHVEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ AD SV+V D+GRGIP D+HP T KSALETVLTVLHAGGKFGG S LHGVG
Sbjct: 61 DINADGSVTVTDDGRGIPTDIHPKTGKSALETVLTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTVWR+ + Q+Y RG VT L + R GT + F PD Q+
Sbjct: 119 ISVVNALSEFVEVTVWREKKVFTQRYERGAAVTELQAKSY---KEARTGTSVTFKPDTQI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 309
FTT+I+FD+ T++GR+RELA+LN + I R E + + Y + GG++EY+ +
Sbjct: 176 FTTSIEFDYITLSGRLRELAYLNAGVKITFTDHRLELLKSDTAKVETYEYKGGIKEYIAY 235
Query: 310 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+N +K PLH+ ++ + + + + I+++LQWC+DAY+D +LG+AN+IRT+DGGTH+EG+KA
Sbjct: 236 MNREKLPLHEEIIYVQGERNNVQIEVSLQWCTDAYTDNVLGFANNIRTVDGGTHLEGLKA 295
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTRTLN++ +K +K+ + +LSGEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTLNAIARKRNKIKENEPNLSGEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+VD V E LTEYLE P V DSIL K++ A KAA AA+ AR+LVR+KSVL SS LPGKL
Sbjct: 356 IVDSLVGEVLTEYLEFRPGVADSILDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKL 415
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCS+ P ESEI+IVEGDSAGGSAKQGRDRR Q I+ PL+ I
Sbjct: 416 ADCSTRDPSESEIYIVEGDSAGGSAKQGRDRRTQAIL-PLRGKIL 459
>gi|434394941|ref|YP_007129888.1| DNA gyrase subunit B [Gloeocapsa sp. PCC 7428]
gi|428266782|gb|AFZ32728.1| DNA gyrase subunit B [Gloeocapsa sp. PCC 7428]
Length = 646
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 279/468 (59%), Positives = 358/468 (76%), Gaps = 16/468 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN++DEA AGY +++EV
Sbjct: 1 MTSSYSADQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHVEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L AD SV+V D+GRGIP D HP T KSALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 DLNADGSVTVTDDGRGIPTDTHPQTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTVWRD + Q++ RG PVT L V P + + GT + F PD +
Sbjct: 119 ISVVNALSEWIEVTVWRDKHVHVQRFERGIPVTEL--QVKP-SKEAKTGTSVTFQPDATI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNP--KLTIALRK----EDSDPEKNQYNEYFFAGGLEEY 306
FTT +FD+ T+AGR+RELA+LN K+T + R+ + S+P+ Y + GG++EY
Sbjct: 176 FTTGTEFDYITLAGRLRELAYLNAGVKITFSDRRLELLKSSEPKVETYE---YKGGIKEY 232
Query: 307 VQWLNTDKKPLHDVVGF-RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 365
V ++N +K+PLH+ + F + + + + +++ALQW DAY+D +LG+AN+IRT+DGGTH+EG
Sbjct: 233 VAYMNREKQPLHEEIIFVQGERNNVQVEVALQWSVDAYTDNILGFANNIRTVDGGTHLEG 292
Query: 366 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 425
+KA LTRTLN++ +K +KD + +LSGEHVREGLT +ISV+VP+PEFEGQTKT+LGN E
Sbjct: 293 LKAVLTRTLNAIARKRNKIKDNEPNLSGEHVREGLTGVISVKVPDPEFEGQTKTKLGNTE 352
Query: 426 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 485
VR +VD V E LTEYL+ HP+V DS+L K++ A KAA AA+ AR+LVR+KSVL SS LP
Sbjct: 353 VRGIVDSLVGEVLTEYLDFHPNVADSVLDKAIQAFKAAEAARHARELVRRKSVLESSPLP 412
Query: 486 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
GKLADCSS ESEIFIVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 413 GKLADCSSRDASESEIFIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 459
>gi|218246132|ref|YP_002371503.1| DNA gyrase subunit B [Cyanothece sp. PCC 8801]
gi|257059181|ref|YP_003137069.1| DNA gyrase subunit B [Cyanothece sp. PCC 8802]
gi|218166610|gb|ACK65347.1| DNA gyrase, B subunit [Cyanothece sp. PCC 8801]
gi|256589347|gb|ACV00234.1| DNA gyrase, B subunit [Cyanothece sp. PCC 8802]
Length = 641
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 273/458 (59%), Positives = 350/458 (76%), Gaps = 9/458 (1%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG++QIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IE+ + +
Sbjct: 6 YGAQQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEIDINS 65
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV+V D+GRGIP D+HP T KSALETV+TVLHAGGKFGG S LHGVG+SVV
Sbjct: 66 DGSVTVTDDGRGIPTDIHPTTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVV 123
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE + VTVWR+G + Q+Y RG PVT+L + P S GT I F PD ++F+
Sbjct: 124 NALSEWVNVTVWREGNIHTQRYERGNPVTSLAANPDPDHST---GTSISFLPDIEIFSGG 180
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
I+FD+NT++GR+RELA+LN + I D+ P + Y + GG++EYV ++ DK
Sbjct: 181 IEFDYNTLSGRLRELAYLNAGVKITFT--DNRPAEIHQETYCYEGGIKEYVAYMCRDKDA 238
Query: 317 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LH D++ + +G+ I++ALQWC DAYSD +LG+AN+IRTIDGGTH+EG+K LTRT+N
Sbjct: 239 LHQDIIYVSGEKNGVQIEVALQWCIDAYSDNLLGFANNIRTIDGGTHLEGLKTVLTRTIN 298
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
++ +K +K+ + +L GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD V
Sbjct: 299 NVARKRNKIKENEANLGGENVREGLTGVISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVG 358
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L EYLE +P V D+I+ K++ A KAA AA+RAR+LVR+KSVL SS LPGKLADCS+
Sbjct: 359 EVLNEYLEFNPQVADNIIEKAVQAFKAAEAARRARELVRRKSVLESSPLPGKLADCSTRD 418
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
PEESEIF+VEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 419 PEESEIFLVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 455
>gi|434398522|ref|YP_007132526.1| DNA gyrase subunit B [Stanieria cyanosphaera PCC 7437]
gi|428269619|gb|AFZ35560.1| DNA gyrase subunit B [Stanieria cyanosphaera PCC 7437]
Length = 642
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 271/462 (58%), Positives = 351/462 (75%), Gaps = 7/462 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +YG++QIQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN++DEA AGY ++IE+
Sbjct: 1 MTSSYGADQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHIEI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L AD SV V D+GRGIP +HP T KSALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 ELNADGSVRVTDDGRGIPTGIHPKTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTVWRD + Q+Y RG P L + R GT + F+PD ++
Sbjct: 119 VSVVNALSEWVEVTVWRDQKIHTQRYERGIPSGDLVVQA-NIQEPQRTGTAVHFFPDTKI 177
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FT I F++N +AGR+RELA+LN + I D E+ + YF+ GG++EYV ++
Sbjct: 178 FTETIHFEYNVLAGRLRELAYLNAGVKITF--TDHRIEETRQEIYFYEGGIKEYVTYMTR 235
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K+PLH D++ + + +G+ I++ALQWC DA++D +LG+AN+IRTIDGGTH+EG+K LT
Sbjct: 236 EKEPLHQDIIYVQGEKNGVNIEVALQWCVDAFNDNLLGFANNIRTIDGGTHLEGLKTVLT 295
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RT+N++ +K +K+ + +L GE+VREGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD
Sbjct: 296 RTINNIARKRNKIKENESNLGGENVREGLTGVISVKVPDPEFEGQTKTKLGNTEVRGIVD 355
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E L EYLE +P V DS++ K++ A KAA AA+RAR+LVR+KSVL SS LPGKLADC
Sbjct: 356 SLVGEVLNEYLEFNPQVADSVIEKAVQAFKAAEAARRARELVRRKSVLESSPLPGKLADC 415
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
SS P ESEIF+VEGDSAGGSAKQGRDR+FQ I+ PL+ I
Sbjct: 416 SSRDPGESEIFLVEGDSAGGSAKQGRDRQFQAIL-PLRGKIL 456
>gi|427711338|ref|YP_007059962.1| DNA gyrase subunit B [Synechococcus sp. PCC 6312]
gi|427375467|gb|AFY59419.1| DNA gyrase subunit B [Synechococcus sp. PCC 6312]
Length = 640
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 262/462 (56%), Positives = 351/462 (75%), Gaps = 9/462 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+S Y + Q++VL+GLE VR RP MYIG+TGP+GLHHLVYE++DN+VDEA AGY +++ +
Sbjct: 1 MSLDYNAAQLRVLKGLEPVRTRPGMYIGTTGPKGLHHLVYEVVDNSVDEALAGYCNHVLI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ D SV+V D+GRGIP D+HP T S +ETV+TVLHAGGKFG GY VSGGLHGVG
Sbjct: 61 QMNHDGSVTVTDDGRGIPTDIHPDTGLSGVETVMTVLHAGGKFG--DGGYKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE LEV VWR+ + Q+Y RG P+T L P +++R+GT + F+PD+Q+
Sbjct: 119 VSVVNALSEWLEVKVWRNNTVFTQRYERGVPMTALEPS--PA-TENRRGTSVTFFPDRQI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FT I+F+ + R+RELA+LN + I D+ E Q Y + GG+ EY+Q++
Sbjct: 176 FTETIEFEAKILTNRLRELAYLNAGIRIEFI--DARGEIPQSEVYCYEGGIREYIQYMIQ 233
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
DK+PLH +++ + + + + +++ALQWCSDAY+++++G+AN+IRT +GGTH+EG+KA LT
Sbjct: 234 DKEPLHPEMIYVQGEKNDVQVEVALQWCSDAYNESLMGFANNIRTNEGGTHLEGLKAVLT 293
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RTLNS+ +K +K+ D +L+GE++REGLT I+SV+VPNPEFEGQTKT+LGN EVR +VD
Sbjct: 294 RTLNSIARKRNKLKEGDSNLAGENIREGLTAIVSVKVPNPEFEGQTKTKLGNTEVRGIVD 353
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E LTEYL+ P D+IL K++ A AA AA+RAR++VR+KSVL SS+LPGKLADC
Sbjct: 354 SVVGEALTEYLDFRPQAADAILEKAIQAFNAAEAARRAREMVRRKSVLESSTLPGKLADC 413
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
SS P ESEIFIVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 414 SSRDPSESEIFIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 454
>gi|428205380|ref|YP_007089733.1| DNA gyrase subunit B [Chroococcidiopsis thermalis PCC 7203]
gi|428007301|gb|AFY85864.1| DNA gyrase subunit B [Chroococcidiopsis thermalis PCC 7203]
Length = 645
Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust.
Identities = 274/465 (58%), Positives = 348/465 (74%), Gaps = 10/465 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y +EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IE+
Sbjct: 1 MTSSYSAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L AD SV V D+GRGIP D HP T KSALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 DLNADGSVQVVDDGRGIPTDTHPQTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTVWRD + Q+Y RG P+ L + + GT +RF PD ++
Sbjct: 119 ISVVNALSEWVEVTVWRDKKVHTQRYERGVPMGELQTKSF---KEAKTGTGVRFKPDAEI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 309
FT +FD+ T+AGR+RELA+LN + I R E ++ + Y + GG+ EYV +
Sbjct: 176 FTVGTEFDYITLAGRLRELAYLNAGVRITFTDHRLELLKSQEPKVETYEYKGGIREYVSY 235
Query: 310 LNTDKKPLHDVVGF-RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+N DK+ LH+ + F + + + + +++ALQWC+DAY+D +LG+AN+IRT+DGGTH+EG+K
Sbjct: 236 INNDKQALHEEIIFVQGERNNVQVEVALQWCTDAYTDNLLGFANNIRTVDGGTHLEGLKT 295
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTRTLN++ +K +KD + +LSGEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTLNAIARKRNKIKDNEPNLSGEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+VD V E LTEYLE P + DSIL K++ A KAA AA+ AR+LVR+KSVL SS LPGKL
Sbjct: 356 IVDSLVGEVLTEYLEFRPSIADSILDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKL 415
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCSS P ESEIFIVEGDSAGGSAKQGRDRR Q I+ PL+ I
Sbjct: 416 ADCSSRDPGESEIFIVEGDSAGGSAKQGRDRRNQAIL-PLRGKIL 459
>gi|126660369|ref|ZP_01731481.1| DNA topoisomerase IV subunit B [Cyanothece sp. CCY0110]
gi|126618342|gb|EAZ89099.1| DNA topoisomerase IV subunit B [Cyanothece sp. CCY0110]
Length = 642
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 274/458 (59%), Positives = 345/458 (75%), Gaps = 9/458 (1%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IE+ +
Sbjct: 7 YGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEIDINP 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV+V D+GRGIP D+HP+T KSALETV+TVLHAGGKFGG S LHGVG+SVV
Sbjct: 67 DGSVTVTDDGRGIPTDVHPSTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE + V VWRD + Q+Y RG P+T+L D GT I F PDK +FT
Sbjct: 125 NALSEWVIVKVWRDDQVHTQRYERGVPITSLETKA---DKDHSTGTSISFLPDKTIFTVG 181
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+FD++T+AGR+RELA+LN + I D+ E+ Y + GG++EYV ++ DK P
Sbjct: 182 TEFDYSTLAGRLRELAYLNAGVKITF--TDNRKEEPHIESYCYEGGIKEYVTYMCRDKDP 239
Query: 317 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LH D++ + +G +++AL WC DAYSD +LG+AN+IRTIDGGTH+EG+K LTRT+N
Sbjct: 240 LHQDIIFVSGEKNGTQVEVALLWCVDAYSDNLLGFANNIRTIDGGTHLEGLKTVLTRTMN 299
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
++ +K +KD D +L GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD V
Sbjct: 300 NVARKRNKLKDNDSNLGGENVREGLTGVISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVG 359
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L+EYLE +P V DSI+ K++ A KAA AA+RAR+LVR+KSVL SS LPGKLADCS+
Sbjct: 360 EVLSEYLEFNPHVADSIIEKAVQAFKAAEAARRARELVRRKSVLESSPLPGKLADCSTRD 419
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
PEESEIF+VEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 420 PEESEIFLVEGDSAGGSAKQGRDRRFQAIL-PLRGKII 456
>gi|443321835|ref|ZP_21050875.1| DNA gyrase, B subunit [Gloeocapsa sp. PCC 73106]
gi|442788451|gb|ELR98144.1| DNA gyrase, B subunit [Gloeocapsa sp. PCC 73106]
Length = 640
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 268/462 (58%), Positives = 350/462 (75%), Gaps = 9/462 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y +EQIQVLEGL+ VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AGY ++IE+
Sbjct: 1 MTSSYSAEQIQVLEGLDPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGYCTHIEI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L D S SV D+GRGIP D HP T KSALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 ELNEDGSCSVTDDGRGIPTDTHPTTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTVWR+ + Q+Y RG PVT L P +++QGT + F PD ++
Sbjct: 119 ISVVNALSEWVEVTVWREKKVHTQRYERGIPVTELISEPHP---ENQQGTSVSFLPDAEI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F+ +FD+NT+AGR++ELA+LN + I PE+ + Y + GG+ EYV ++
Sbjct: 176 FSETREFDYNTLAGRLKELAYLNAGVKITFSDRRQTPERVE--AYCYEGGIREYVTYMTR 233
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K+PLH D++ + + + +++ALQWC DAYSD +LG+AN+IRTIDGGTH+EG+K LT
Sbjct: 234 EKEPLHKDIIYVSGERNDVQVEVALQWCVDAYSDNLLGFANNIRTIDGGTHLEGLKTVLT 293
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RT+N++ +K +K+ + +L+GE+VREGLT ++SV+VP+PEFEGQTKT+LGN EVR +VD
Sbjct: 294 RTINTVARKRNKIKENEANLAGENVREGLTGVVSVKVPDPEFEGQTKTKLGNTEVRGIVD 353
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E L+EYLE +P V DS++ K++ A KAA AA+ AR+LVR+KSVL SS LPGKLADC
Sbjct: 354 SLVGEVLSEYLEFNPHVADSVIDKAIQAFKAAEAARNARELVRRKSVLESSPLPGKLADC 413
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
S+ P ESEIF+VEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 414 STRDPAESEIFLVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 454
>gi|416374474|ref|ZP_11683197.1| DNA gyrase subunit B [Crocosphaera watsonii WH 0003]
gi|357266694|gb|EHJ15286.1| DNA gyrase subunit B [Crocosphaera watsonii WH 0003]
Length = 642
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 276/462 (59%), Positives = 349/462 (75%), Gaps = 17/462 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+EQIQVLEGL+ VRKRP MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IE+ + A
Sbjct: 7 YGAEQIQVLEGLDPVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEIDINA 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D S++V DNGRGIP D+HP T KSALETV+TVLHAGGKFGG S LHGVG+SVV
Sbjct: 67 DGSITVTDNGRGIPTDVHPTTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE + V VWRD + Q+Y RG P+ +L D K GT + F PD Q+F+
Sbjct: 125 NALSEWVVVNVWRDNNIHTQRYERGIPLGSLDTKP---DKKHSTGTSVSFLPDIQIFSGG 181
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNE-YFFAGGLEEYVQWLNT 312
I+FD++T+AGR++ELA+LN + I RKE+ YNE Y + GG++EYV ++
Sbjct: 182 IEFDYSTLAGRLKELAYLNAGVKITFTDHRKEEP------YNETYCYEGGIKEYVTYMCR 235
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
DK PLH D++ + +G +++AL WC DAYSD +LG+AN+IRTIDGGTH+EG+K LT
Sbjct: 236 DKDPLHQDIIYVSGEKNGTQVEVALLWCVDAYSDNLLGFANNIRTIDGGTHLEGLKTVLT 295
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RT+N++ +K +K+ D +L GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD
Sbjct: 296 RTMNNVARKRNKLKENDANLGGENVREGLTGVISVKVPEPEFEGQTKTKLGNTEVRGIVD 355
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E LTEYLE +P V D+I+ K++ A KAA AA+RAR+LVR+KSVL SS LPGKLADC
Sbjct: 356 SLVGEVLTEYLEFNPQVADNIIEKAVQAFKAAEAARRARELVRRKSVLESSPLPGKLADC 415
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
SS PEESEIF+VEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 416 SSRDPEESEIFLVEGDSAGGSAKQGRDRRFQAIL-PLRGKII 456
>gi|67920055|ref|ZP_00513575.1| DNA gyrase, B subunit [Crocosphaera watsonii WH 8501]
gi|67857539|gb|EAM52778.1| DNA gyrase, B subunit [Crocosphaera watsonii WH 8501]
Length = 642
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 276/462 (59%), Positives = 349/462 (75%), Gaps = 17/462 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+EQIQVLEGL+ VRKRP MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IE+ + A
Sbjct: 7 YGAEQIQVLEGLDPVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEIDINA 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D S++V DNGRGIP D+HP T KSALETV+TVLHAGGKFGG S LHGVG+SVV
Sbjct: 67 DGSITVTDNGRGIPTDVHPTTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE + V VWRD + Q+Y RG P+ +L D K GT + F PD Q+F+
Sbjct: 125 NALSEWVVVNVWRDNNIHTQRYERGIPLGSLDTKP---DKKHSTGTSVSFLPDIQIFSGG 181
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNE-YFFAGGLEEYVQWLNT 312
I+FD++T+AGR++ELA+LN + I RKE+ YNE Y + GG++EYV ++
Sbjct: 182 IEFDYSTLAGRLKELAYLNAGVKITFTDHRKEEP------YNETYCYEGGIKEYVTYMCR 235
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
DK PLH D++ + +G +++AL WC DAYSD +LG+AN+IRTIDGGTH+EG+K LT
Sbjct: 236 DKDPLHQDIIYVSGEKNGTQVEVALLWCVDAYSDNLLGFANNIRTIDGGTHLEGLKTVLT 295
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RT+N++ +K +K+ D +L GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD
Sbjct: 296 RTMNNVARKRNKLKENDANLGGENVREGLTGVISVKVPEPEFEGQTKTKLGNTEVRGIVD 355
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E LTEYLE +P V D+I+ K++ A KAA AA+RAR+LVR+KSVL SS LPGKLADC
Sbjct: 356 SLVGEVLTEYLEFNPQVADNIIEKAVQAFKAAEAARRARELVRRKSVLESSPLPGKLADC 415
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
SS PEESEIF+VEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 416 SSRDPEESEIFLVEGDSAGGSAKQGRDRRFQAIL-PLRGKII 456
>gi|443654055|ref|ZP_21131209.1| DNA gyrase, B subunit [Microcystis aeruginosa DIANCHI905]
gi|443333902|gb|ELS48439.1| DNA gyrase, B subunit [Microcystis aeruginosa DIANCHI905]
Length = 616
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 263/438 (60%), Positives = 337/438 (76%), Gaps = 9/438 (2%)
Query: 97 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 156
MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IEV + AD SVSV D+GRGIP D+HP
Sbjct: 1 MYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEVDIKADGSVSVTDDGRGIPTDVHPT 60
Query: 157 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 216
T KSALETVLT+LHAGGKFG S GY VSGGLHGVG+SVVNALS ++VTVWRD + Q
Sbjct: 61 TGKSALETVLTILHAGGKFG--SGGYKVSGGLHGVGISVVNALSAWVDVTVWRDHKVHTQ 118
Query: 217 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 276
+Y RG PVT L V +++ GTR+ F PD ++F+ I+FD++T++GR+RELA+LN
Sbjct: 119 RYERGIPVTEL---VSSPSQEEKTGTRVNFLPDTEIFSQGIEFDYSTLSGRLRELAYLNA 175
Query: 277 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 335
+ I D E+ Y + GG++EYV ++ +K+ LH D++ + +GI I++A
Sbjct: 176 GVKITF--SDYRAEEPHIETYCYEGGIKEYVAYMCREKETLHKDIIYVSGEKNGINIEVA 233
Query: 336 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 395
QWC DAYSD +LG+AN+IRTIDGGTH+EG+KA LTRTLN++ +K +K+ + +L+GE+
Sbjct: 234 FQWCIDAYSDNILGFANNIRTIDGGTHLEGLKAVLTRTLNNVARKRNKIKENEPNLAGEN 293
Query: 396 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 455
VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD V E L EYLE +P V D+I+ K
Sbjct: 294 VREGLTAVISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGETLNEYLEQNPQVADTIIEK 353
Query: 456 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 515
++ A KAA AA+RARDLVR+KSVL SS LPGKLADCS PE+SEI+IVEGDSAGGSAKQ
Sbjct: 354 AVQAYKAAEAARRARDLVRRKSVLESSPLPGKLADCSERDPEKSEIYIVEGDSAGGSAKQ 413
Query: 516 GRDRRFQVIINPLQESIF 533
GRDRRFQ I+ PL+ I
Sbjct: 414 GRDRRFQAIL-PLRGKIL 430
>gi|220908378|ref|YP_002483689.1| DNA gyrase subunit B [Cyanothece sp. PCC 7425]
gi|219864989|gb|ACL45328.1| DNA gyrase, B subunit [Cyanothece sp. PCC 7425]
Length = 645
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 275/465 (59%), Positives = 346/465 (74%), Gaps = 10/465 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ Y ++QIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AGY NI V
Sbjct: 1 MTTNYSADQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGYCKNILV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L D SV+V D+GRGIP D+ T KSALETVLTVLHAGGKFGG S LHGVG
Sbjct: 61 ELNPDGSVTVTDDGRGIPTDIVSKTGKSALETVLTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS LE VWRDG + Q++ RG P T L +R GT I+F PD ++
Sbjct: 119 VSVVNALSSWLEAKVWRDGKVFTQRFERGLPATDLKAQP---SGGNRTGTAIQFMPDAEI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQ---YNEYFFAGGLEEYVQW 309
FT I+FD+ T++GR+RELA+LN + I R D K YF+ GG++EYV +
Sbjct: 176 FTETIEFDYKTLSGRLRELAYLNAGVKIEFRDGRLDLLKRDEPLLETYFYEGGIKEYVSY 235
Query: 310 LNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+N DK+PLH +++ + + + + +++ALQWC+DAY+D +LG+AN+IRTIDGGTH+EG+KA
Sbjct: 236 MNVDKEPLHQEIIYVQGERNDVQVEVALQWCTDAYTDNLLGFANNIRTIDGGTHLEGLKA 295
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTRTLN+ +K +K+ D +L+GE+VREG+T +ISV+VP PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTLNNFARKRNKLKEGDPNLAGENVREGMTAVISVKVPEPEFEGQTKTKLGNTEVRG 355
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+VD V E LTEYL+ P V+DSIL K++ A AA AA+RAR+LVR+KSVL SS+LPGKL
Sbjct: 356 IVDSLVGEVLTEYLDFRPAVVDSILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKL 415
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCSS P E+EIFIVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 416 ADCSSRDPREAEIFIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 459
>gi|119487794|ref|ZP_01621303.1| DNA topoisomerase IV subunit B [Lyngbya sp. PCC 8106]
gi|119455627|gb|EAW36764.1| DNA topoisomerase IV subunit B [Lyngbya sp. PCC 8106]
Length = 645
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 274/465 (58%), Positives = 350/465 (75%), Gaps = 10/465 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN++DEA AG+ ++IEV
Sbjct: 1 MTSSYSADQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGHCTHIEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
AD SV+V D+GRGIP+D+H T KSALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 DFNADGSVTVTDDGRGIPVDVHSKTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EV V RD +Y Q+Y RG PV L P K + GT ++F PD +
Sbjct: 119 VSVVNALSEWVEVQVLRDETQYTQRYQRGVPVDELQSK--PSQGK-QTGTSVQFLPDTTI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDP---EKNQYNEYFFAGGLEEYVQW 309
FTT I+FD+ TIA R+RELA+LN + I L D E+ + + + GG+ EY+ +
Sbjct: 176 FTTGIEFDYATIANRLRELAYLNAGVRITLTDNRLDLIQLEEAKTESFCYEGGIREYIAY 235
Query: 310 LNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+N +K+PLH DV+ + + + I++ALQWC DAYSD +LG+AN+IRTIDGGTH+EG+KA
Sbjct: 236 MNREKQPLHEDVIYVSGERNNVQIEVALQWCVDAYSDNILGFANNIRTIDGGTHLEGLKA 295
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTRT+N+ +K +K+ + +L GE+VREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTMNNFARKRNKLKENESNLGGENVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+VD V E LTEYL+ HP + D++L K++ A KAA AA+RARDLVR+KSVL SS LPGKL
Sbjct: 356 IVDSLVGEVLTEYLDFHPHIADAVLEKAIQAFKAAEAARRARDLVRRKSVLESSPLPGKL 415
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCS+ P ESEIF+VEGDSAGGSAKQGRDRR Q I+ PL+ I
Sbjct: 416 ADCSTRIPAESEIFLVEGDSAGGSAKQGRDRRTQAIL-PLRGKIL 459
>gi|428301860|ref|YP_007140166.1| DNA gyrase subunit B [Calothrix sp. PCC 6303]
gi|428238404|gb|AFZ04194.1| DNA gyrase subunit B [Calothrix sp. PCC 6303]
Length = 645
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 273/465 (58%), Positives = 345/465 (74%), Gaps = 10/465 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN++DEA AGY ++++V
Sbjct: 1 MTTDYGAEQIQVLEGLEHVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHVDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L D S V D+GRGIP+D H T KSALETVLTVL AGGKFGG S Y VSGGLHGVG
Sbjct: 61 ELNPDGSCGVKDDGRGIPVDTHTKTGKSALETVLTVLGAGGKFGGGS--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVN LSE L+VT+WRD Y Q+Y RG L + R GT I+F PD +
Sbjct: 119 VSVVNGLSEWLDVTIWRDKKVYTQRYERGVAQAELKNQPY---KEARTGTAIKFKPDDTI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 309
FTT +FD+ T++ R+RELA+LN + I R E + + Y + GG+ EYV +
Sbjct: 176 FTTGTEFDYTTLSSRLRELAYLNAGVRITFADNRLELLKSDTPRLETYEYKGGIREYVAY 235
Query: 310 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+N DK+ H+ ++ + + + +++ALQWCSDAYSD +LG+AN+IRT+DGGTH+EG+K
Sbjct: 236 MNADKQAQHEEIIYVQGERHNVQVEVALQWCSDAYSDNVLGFANNIRTVDGGTHLEGLKT 295
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTRT+N++ +K +K+ + +LSGEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTMNAIARKRNKIKENESNLSGEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+VD V E LTEYLE HP V DSIL K++ A KAA AA+ AR+LVR+KSVL SS LPGKL
Sbjct: 356 IVDTLVGEVLTEYLEFHPGVADSILDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKL 415
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCS+ P ESEI++VEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 416 ADCSTRDPAESEIYLVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 459
>gi|384252438|gb|EIE25914.1| type II DNA topoisomerase [Coccomyxa subellipsoidea C-169]
Length = 744
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 273/492 (55%), Positives = 362/492 (73%), Gaps = 15/492 (3%)
Query: 56 RAFLSSSIATEAFKENPVSK--TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYE 113
R L+++ A + N +S Y ++QIQVLEGL+ VRKRP MYIGSTG RGLHHLVYE
Sbjct: 71 RRSLTTTFAAQTSPSNVLSAHGDYDADQIQVLEGLDPVRKRPGMYIGSTGQRGLHHLVYE 130
Query: 114 ILDNAVDEAQAGYASNIEVAL-LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAG 172
ILDNA+DE Q+GYA ++V + L V+++D+GRGIP + HP T +SALETVLTVLHAG
Sbjct: 131 ILDNAIDEVQSGYAHTVKVEMDLTSGWVTISDDGRGIPTNTHPQTGRSALETVLTVLHAG 190
Query: 173 GKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVL 232
GKFGG SGYSVSGGLHGVG+SVVNALSE L VTVWR G E+ Q Y +G+P+T L L
Sbjct: 191 GKFGGQGSGYSVSGGLHGVGISVVNALSEQLHVTVWRQGKEFQQSYRQGRPMTELLEAQL 250
Query: 233 PVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSD---- 288
P + GT+++F DK VF + D TI R++ELAFLN TI R +S
Sbjct: 251 PKKDSKKSGTQVKFLYDKDVFAKGVTMDPKTIRTRLQELAFLNSNATIWFRTIESGSAPS 310
Query: 289 -------PEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSD 341
P + ++ + F GGL EYV++LN D +P+H+ + + VDG+ +++ALQWCSD
Sbjct: 311 NGNGASPPPEPEWEKLHFDGGLCEYVKYLNRDSQPMHEPIFVTEKVDGVVVEVALQWCSD 370
Query: 342 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 401
+SD ++G+ NS++TIDGGTHI+G+KA+LTRTLN+LG+K+K +K+ + +L+G+H+REGL+
Sbjct: 371 TFSDLLIGFVNSVKTIDGGTHIDGLKAALTRTLNTLGRKTKALKENEANLAGDHIREGLS 430
Query: 402 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 461
C+ISV+VP PEFEGQTKTRLGNPEVRK+VD V + + E LE+ L +L K+++A +
Sbjct: 431 CVISVKVPEPEFEGQTKTRLGNPEVRKIVDACVAKGIMESLEMDTATLGLVLGKAVAAWR 490
Query: 462 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 521
AA AAK+AR+LVR+KS+L S+LPGKL+DC+ST SEIF+VEGDSAGGSAKQ RDRRF
Sbjct: 491 AAEAAKKARELVRRKSLLTKSTLPGKLSDCTSTDKALSEIFVVEGDSAGGSAKQARDRRF 550
Query: 522 QVIINPLQESIF 533
Q ++ PL+ I
Sbjct: 551 QAVL-PLRGKIL 561
>gi|218440010|ref|YP_002378339.1| XRE family transcriptional regulator [Cyanothece sp. PCC 7424]
gi|218172738|gb|ACK71471.1| transcriptional regulator, XRE family [Cyanothece sp. PCC 7424]
Length = 1191
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 275/462 (59%), Positives = 347/462 (75%), Gaps = 9/462 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN++DEA AGY ++IEV
Sbjct: 1 MTSNYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHIEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ +D SV+V D+GRGIP D HP T KSALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 DINSDGSVTVTDDGRGIPTDTHPTTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE + VTVWRD + Q+Y RG PVT L DS GT + F PD Q+
Sbjct: 119 VSVVNALSEWVNVTVWRDKNVFTQRYERGVPVTALESQP---DSNHSTGTSVSFLPDVQI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FT I+FD+NT+AGR+RELA+LN I D+ E+ + Y + GG++EYV ++
Sbjct: 176 FTGGIEFDYNTLAGRLRELAYLNAGARITFT--DNRGEQPRVESYCYEGGIKEYVAYMCR 233
Query: 313 DKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K+PLH+ ++ + + +GI I++ALQW D Y+D +LG+AN+IRTIDGGTH+EG+KA LT
Sbjct: 234 EKQPLHEEIIYVQGERNGIYIEVALQWYIDTYNDNLLGFANNIRTIDGGTHLEGLKAVLT 293
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RT+N++ +K +KD + +L+GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD
Sbjct: 294 RTINNVARKRNKIKDNEPNLAGENVREGLTGVISVKVPEPEFEGQTKTKLGNTEVRGIVD 353
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E L EYLE HP + D+I+ K++ A KAA AA+RAR+LVR+KSVL SS LPGKLADC
Sbjct: 354 SLVGEVLGEYLEFHPQIADAIIEKAVQAFKAAEAARRARELVRRKSVLESSPLPGKLADC 413
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
S P SEIFIVEGDSAGGSAKQGRDRR Q I+ PL+ I
Sbjct: 414 SERDPARSEIFIVEGDSAGGSAKQGRDRRSQAIL-PLRGKIL 454
>gi|427418615|ref|ZP_18908798.1| DNA gyrase subunit B [Leptolyngbya sp. PCC 7375]
gi|425761328|gb|EKV02181.1| DNA gyrase subunit B [Leptolyngbya sp. PCC 7375]
Length = 645
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 269/465 (57%), Positives = 353/465 (75%), Gaps = 10/465 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ YG++QIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AGY I +
Sbjct: 1 MTTDYGADQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGYCKTITI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L AD SV+V D+GRGIP D+H T KSALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 DLNADGSVTVTDDGRGIPTDVHARTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTVWR+ E+ Q+Y RG+ L+ + + + GT + F PD+ +
Sbjct: 119 VSVVNALSEWVEVTVWRNKKEHLQRYERGEAQGELS---VKSGADSQTGTSVSFKPDQLI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 309
FT ++FD++T+AGR+RELA+LN + I R E ++ + N YF+ GG+ EYV++
Sbjct: 176 FTETVEFDYSTLAGRLRELAYLNAGVDITFTDHRLELLKADEPKINRYFYEGGIREYVEY 235
Query: 310 LNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+N +K+P+H D++ + +G+ ++ ALQW DAYSD ++G+AN+IRT+DGGTH+EG+KA
Sbjct: 236 INKEKQPIHPDIIYVTGEKNGVQVEAALQWSVDAYSDNLMGFANNIRTVDGGTHLEGLKA 295
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTRT+N+ +K KD + +L+GE++REGLT +ISV+VP PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTMNNFARKRNKRKDNEPNLAGENIREGLTAVISVKVPEPEFEGQTKTKLGNTEVRG 355
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+VD + E L+EYL+ +P+V+DSIL K++ + AA AA+RARDLVR+KSVL SS+LPGKL
Sbjct: 356 IVDSLIGETLSEYLDFNPNVVDSILEKAIQSFNAAEAARRARDLVRRKSVLESSTLPGKL 415
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCSS P ESEIFIVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 416 ADCSSRDPAESEIFIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 459
>gi|428772188|ref|YP_007163976.1| Xre family transcriptional regulator [Cyanobacterium stanieri PCC
7202]
gi|428686467|gb|AFZ46327.1| transcriptional regulator, XRE family [Cyanobacterium stanieri PCC
7202]
Length = 1193
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 278/463 (60%), Positives = 354/463 (76%), Gaps = 13/463 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN++DEA AG+ S+IE+
Sbjct: 7 TSNYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGHCSHIEID 66
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ D SVSV D+GRGIP D+HP+T KSALETV+TVLHAGGKFGG VSGGLHGVG+
Sbjct: 67 INEDGSVSVTDDGRGIPTDVHPSTGKSALETVMTVLHAGGKFGGGGY--KVSGGLHGVGI 124
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE +EV VWR+G + Q+Y RG PVT L V D+ GT I F PD +F
Sbjct: 125 SVVNALSEWVEVKVWRNGNLHTQRYERGIPVTEL---VPQPDNDHSTGTSISFMPDALIF 181
Query: 254 TTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLN 311
T +F++ T++ R+RELA+LN K+T R+ DS E+ Y + GG++EYV ++
Sbjct: 182 TETTEFNYGTLSNRLRELAYLNAGVKITFCDRRLDSQREET----YCYEGGIKEYVTYMT 237
Query: 312 TDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 370
+K+ LH D++ + +G+ +++A QWC DAYSDT+LG+AN+IRT+DGGTH+EG+K L
Sbjct: 238 REKEVLHQDIIYVEGEKNGVQVEVAFQWCVDAYSDTILGFANNIRTVDGGTHLEGLKTVL 297
Query: 371 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
TRTLN++ +K +KD + +L+GE+VREGLT +ISV+VP+PEFEGQTKT+LGN EVR +V
Sbjct: 298 TRTLNNVARKRNKIKDNEPNLAGENVREGLTAVISVKVPDPEFEGQTKTKLGNSEVRGIV 357
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
D V E L EYLE +P V DSI+ K++ A KAA AA+RAR+LVR+KSVL SS LPGKLAD
Sbjct: 358 DSLVGEVLNEYLEFNPHVADSIIEKAVQAFKAAEAARRARELVRRKSVLESSPLPGKLAD 417
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
CSS P ESEIF+VEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 418 CSSRDPAESEIFLVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 459
>gi|411117920|ref|ZP_11390301.1| DNA gyrase subunit B [Oscillatoriales cyanobacterium JSC-12]
gi|410711644|gb|EKQ69150.1| DNA gyrase subunit B [Oscillatoriales cyanobacterium JSC-12]
Length = 645
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 276/465 (59%), Positives = 350/465 (75%), Gaps = 10/465 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ YG+EQIQVLEG+E VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AGY NI+V
Sbjct: 1 MTNNYGAEQIQVLEGIEHVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGYCKNIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L + SV+V D+GRGIP +H T KSALETVLT L AGGKFG Y VSGGLHGVG
Sbjct: 61 TLNDNGSVTVVDDGRGIPTGIHSRTGKSALETVLTKLGAGGKFGEGGG-YKVSGGLHGVG 119
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTVWRDG + Q++ RG P + + DR GT + F PD +
Sbjct: 120 ISVVNALSEWVEVTVWRDGKIHTQRFERGIPKGDMQVES---GAGDRTGTSVTFLPDSTI 176
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 309
FT I FD+ T+AGR+RELAFLN + I R++ + + + YF+ GG+ EYV +
Sbjct: 177 FTGGIVFDYATLAGRLRELAFLNGGVRITFTDNRRDSPESGEPRTETYFYEGGIREYVTY 236
Query: 310 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+N +K+PLH+ ++ + + + + +++ALQW +DAY+D +LG+AN+IRTIDGGTH+EG+K
Sbjct: 237 MNREKQPLHEEIIYIQGERNNVQVEVALQWSADAYTDNLLGFANNIRTIDGGTHLEGLKT 296
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTRTLNSL +K +KD D L+GE++REGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 297 VLTRTLNSLARKRNKLKDDD-KLAGENIREGLTGVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+VD V E LTEYLE P V D+I+ K+L A +AA AA++AR+LVR+KSVL SS+LPGKL
Sbjct: 356 IVDSLVGEVLTEYLEFRPSVADAIIEKALEAFRAAEAARKARELVRRKSVLESSTLPGKL 415
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCSS P ESEIFIVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 416 ADCSSRDPAESEIFIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 459
>gi|307154719|ref|YP_003890103.1| DNA gyrase subunit B [Cyanothece sp. PCC 7822]
gi|306984947|gb|ADN16828.1| DNA gyrase, B subunit [Cyanothece sp. PCC 7822]
Length = 640
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 272/462 (58%), Positives = 348/462 (75%), Gaps = 9/462 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN++DEA AGY ++IEV
Sbjct: 1 MTSNYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHIEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ D SV+V D+GRGIP D HP T KSALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 DINPDGSVTVTDDGRGIPTDTHPTTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE + VTVWRD + Q+Y RG PVT+L ++ GT + F PD Q+
Sbjct: 119 VSVVNALSEWVNVTVWRDQKRFTQRYERGIPVTSLESQP---ETDHSTGTSVSFLPDTQI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F+ I+FD++T+AGR+RELA+LN + I D E+ + Y + GG++EYV ++
Sbjct: 176 FSDGIEFDYSTLAGRLRELAYLNAGVRITF--SDKRLEQPRVESYCYEGGIKEYVAYMCR 233
Query: 313 DKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K+PLH+ ++ + + +GI I++ALQW D Y+D +LG+AN+IRTIDGGTH+EG+KA LT
Sbjct: 234 EKQPLHEEIIYVQGERNGIQIEVALQWYIDTYNDNLLGFANNIRTIDGGTHLEGLKAVLT 293
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RTLN++ +K +K+ + +L+GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD
Sbjct: 294 RTLNNVARKRNKIKENEPNLAGENVREGLTGVISVKVPEPEFEGQTKTKLGNTEVRGIVD 353
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E L EYLE HP + DSI+ K++ A KAA AA+RAR+LVR+KSVL SS LPGKLADC
Sbjct: 354 SLVGEVLGEYLEFHPQIADSIIEKAVQAFKAAEAARRARELVRRKSVLESSPLPGKLADC 413
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
S P +SEIFIVEGDSAGGSAKQGRDRR Q I+ PL+ I
Sbjct: 414 SERDPAKSEIFIVEGDSAGGSAKQGRDRRSQAIL-PLRGKIL 454
>gi|428222103|ref|YP_007106273.1| DNA gyrase subunit B [Synechococcus sp. PCC 7502]
gi|427995443|gb|AFY74138.1| DNA gyrase, B subunit [Synechococcus sp. PCC 7502]
Length = 646
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 271/466 (58%), Positives = 349/466 (74%), Gaps = 9/466 (1%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++TY ++QIQVLEGLEAVRKRP MYIGSTGP+GLHHLV+E++DN+VDEA GY IE+
Sbjct: 8 NETYNADQIQVLEGLEAVRKRPGMYIGSTGPKGLHHLVFEVVDNSVDEALGGYCDRIEIE 67
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
LL D SVSV DNGRGIP D+HP T KSALETV+TVLHAGGKFGG S LHGVG+
Sbjct: 68 LLPDGSVSVTDNGRGIPTDIHPKTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGI 125
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE +EV+VWR Y Q++ RG P+ LT + D+ R+GT++RF PD Q+F
Sbjct: 126 SVVNALSEWVEVSVWRQDQIYTQRFERGFPIGILTG--VKTDNP-RRGTQVRFKPDAQIF 182
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T FD T+AGR++ELA+LN + I D E+ + Y + GG+ EYV ++ +
Sbjct: 183 LTETTFDFTTLAGRLKELAYLNAGVYIQF--SDRRGEEPRSEVYQYEGGIREYVTYMTRE 240
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ +H D++ + D + +++ALQWCSDAY+D +LG+AN+IRTIDGGTH+EG+K LTR
Sbjct: 241 KEAIHNDIIYVNGERDHVQVEVALQWCSDAYNDNILGFANNIRTIDGGTHLEGLKTVLTR 300
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
T+N+ +K K +K+ D +L+GE+VREGLT +ISV+VP+PEFEGQTKT+LGNPEVR +VD
Sbjct: 301 TINANARKLKKLKEGDSNLAGENVREGLTAVISVKVPDPEFEGQTKTKLGNPEVRGIVDS 360
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
V E L+EYLE HP + SI+ K++ + AA AA+RAR+LVR+KS L SS+LPGKLADCS
Sbjct: 361 FVGEVLSEYLEFHPAIAASIIDKAVQSFNAAEAARRARELVRRKSALESSTLPGKLADCS 420
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESE+FIVEGDSAGGSAKQGRDR FQ I+ PL+ + A
Sbjct: 421 SRDPRESEVFIVEGDSAGGSAKQGRDRHFQAIL-PLRGKVLNIEKA 465
>gi|428211442|ref|YP_007084586.1| type IIA topoisomerase subunit B [Oscillatoria acuminata PCC 6304]
gi|427999823|gb|AFY80666.1| type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B
subunit [Oscillatoria acuminata PCC 6304]
Length = 1197
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 267/465 (57%), Positives = 352/465 (75%), Gaps = 10/465 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ Y ++QIQVLEGLEAVRKRP MYIG+TGPRGLHHLVYE++DN++DEA AG+ ++IE+
Sbjct: 1 MTSNYSADQIQVLEGLEAVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGHCTHIEI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
D S +V D+GRGIP D+H T +SALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 EFNPDGSCTVTDDGRGIPTDIHSKTGRSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTVWR+ + Q+Y RG + LT P+ ++R GT + F PD Q+
Sbjct: 119 ISVVNALSEWVEVTVWREKKVHTQRYERGAAIGELTGK--PI-KENRTGTSVCFKPDLQI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKN---QYNEYFFAGGLEEYVQW 309
F+T I+FD++T+AGR+RELA+LN + I + KN + Y + GG+ EYV++
Sbjct: 176 FSTGIEFDYSTVAGRLRELAYLNAGVKITFSDNRIELLKNNEPRVESYCYEGGIREYVEY 235
Query: 310 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+N DK+PLH+ ++ + + + ++++LQWC+DAY+D +LG+AN+IRTIDGGTH+EG+KA
Sbjct: 236 MNRDKQPLHEEIIYVEGERNNVQVEVSLQWCTDAYTDNVLGFANNIRTIDGGTHLEGLKA 295
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTRT+N++ +K +K+ D +L GEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTMNAIARKRNKLKEGDSNLGGEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+VD V E LTEYLE P V D+IL +++ A AA AA+RAR+LVR+KSVL SS LPGKL
Sbjct: 356 IVDSLVGEVLTEYLEFRPSVADAILERAIQAFNAAEAARRARELVRRKSVLESSPLPGKL 415
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCS+ P ESEI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 416 ADCSTKDPSESEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 459
>gi|428224467|ref|YP_007108564.1| DNA gyrase subunit B [Geitlerinema sp. PCC 7407]
gi|427984368|gb|AFY65512.1| DNA gyrase subunit B [Geitlerinema sp. PCC 7407]
Length = 646
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 272/467 (58%), Positives = 351/467 (75%), Gaps = 14/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ YG++QIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AGY I+V
Sbjct: 1 MANEYGADQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGYCHQIQV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L AD SVSV D+GRGIP D+HP T +SALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 TLNADGSVSVTDDGRGIPTDVHPRTGRSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTVWRD + ++ RG P+ ++ P + R GT + F PD Q+
Sbjct: 119 VSVVNALSEWVEVTVWRDRKVFKHRFERGVPIGEMSSEPYP---EARTGTSLTFMPDVQI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE-----YFFAGGLEEYV 307
FT I+FD+ +A R+RELA+LN + I+ DS E + NE Y + GG++EY+
Sbjct: 176 FTGGIEFDYAILASRLRELAYLNGGVYISF--TDSRLELLKSNEPKVEVYHYEGGIQEYI 233
Query: 308 QWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 366
+LN DK+P+H+ V+ + + +G+ ++++LQWC DA++D +LG+AN+IRT+DGGTH+EG+
Sbjct: 234 AYLNRDKQPIHEEVIYVQGEREGVQLEVSLQWCVDAFTDNLLGFANNIRTVDGGTHLEGL 293
Query: 367 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 426
KA LTRT+NS+ +K +K+ + +L GEH+REGLT +ISV+VP+PEFEGQTKT+LGN EV
Sbjct: 294 KAVLTRTMNSIARKRNRLKENESNLGGEHIREGLTGVISVKVPDPEFEGQTKTKLGNMEV 353
Query: 427 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 486
R +V+ V E LTEYL P V D+IL K++ A AA AA+RAR+LVR+KSVL SS+LPG
Sbjct: 354 RGIVESFVGEVLTEYLNFRPGVADAILEKAIQAYNAAEAARRARELVRRKSVLESSTLPG 413
Query: 487 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
KLADCSS ESEIFIVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 414 KLADCSSRDASESEIFIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 459
>gi|428315585|ref|YP_007113467.1| DNA gyrase subunit B [Oscillatoria nigro-viridis PCC 7112]
gi|428239265|gb|AFZ05051.1| DNA gyrase subunit B [Oscillatoria nigro-viridis PCC 7112]
Length = 646
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 273/468 (58%), Positives = 352/468 (75%), Gaps = 16/468 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIG+TGPRGLHHLVYE++DN++DEA AG+ ++IE+
Sbjct: 1 MTSSYSADQIQVLEGLEAVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGHCTHIEI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L AD SV+V D+GRGIP + T KS +ETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 DLNADGSVTVTDDGRGIPTGIVAKTGKSGIETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTVW D E+ Q+Y RG PVT L V P + R GT + F PD Q+
Sbjct: 119 ISVVNALSEWVEVTVWLDQKEHLQRYERGNPVTEL--KVKP-NKGTRTGTSVSFLPDTQI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRK------EDSDPEKNQYNEYFFAGGLEEY 306
FTT I+FD+ T+AGR+REL +LN + I + S+P Y + GG++EY
Sbjct: 176 FTTGIEFDYTTLAGRLRELGYLNAGVRITFSDHRLALLKSSEP---HIETYCYEGGIKEY 232
Query: 307 VQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 365
+ ++N +K+PLHD V+ + + + + I++ALQWC DA+SD +LG+AN+IRTIDGGTH+EG
Sbjct: 233 IAYMNREKQPLHDEVIYVQGERNNVQIEVALQWCVDAFSDNVLGFANNIRTIDGGTHLEG 292
Query: 366 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 425
+KA LTRT+NS+ +K +K+ + +L+GE+VREGLT +ISV+VP+PEFEGQTKT+LGN E
Sbjct: 293 LKAVLTRTMNSIARKRNKIKENEPNLAGENVREGLTAVISVKVPDPEFEGQTKTKLGNTE 352
Query: 426 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 485
VR +VD V E LTEYLE P V D+IL K++ A KAA AA+RARDLVR+KSVL SS LP
Sbjct: 353 VRGIVDSLVGEVLTEYLEFRPQVADAILEKAIQAFKAAEAARRARDLVRRKSVLESSPLP 412
Query: 486 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
GKLADCSS P SEI++VEGDSAGGSAKQGRDR+FQ I+ PL+ I
Sbjct: 413 GKLADCSSRDPALSEIYLVEGDSAGGSAKQGRDRQFQAIL-PLRGKIL 459
>gi|443326004|ref|ZP_21054673.1| DNA gyrase, B subunit [Xenococcus sp. PCC 7305]
gi|442794385|gb|ELS03803.1| DNA gyrase, B subunit [Xenococcus sp. PCC 7305]
Length = 644
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 265/462 (57%), Positives = 356/462 (77%), Gaps = 5/462 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN++DEA AG+ ++IE+
Sbjct: 1 MTSSYDADQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGHCTHIEI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ ++ ++ V D+GRGIP+ +H T KSALETV+TVLHAGGKFGGS SGY VSGGLHGVG
Sbjct: 61 DITSEGAIKVTDDGRGIPVGIHSKTGKSALETVMTVLHAGGKFGGSGSGYKVSGGLHGVG 120
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTVWRDG + Q+Y +GK L D+ + GT + F+PD +
Sbjct: 121 VSVVNALSEWVEVTVWRDGDIHLQRYEKGKAQGVLQSSP-NADNPTQTGTSVHFFPDATI 179
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FT I+F++N +AGR++ELA+LN + I ++ + E Q Y + GG++EYV ++
Sbjct: 180 FTDTIEFEYNVLAGRLKELAYLNAGVKITF-TDNREAEPRQ-ELYCYEGGIKEYVAYMTR 237
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K+ LH D++ ++ +G+T+++ALQWC DAYSD +LG+AN+IRTIDGGTH+EG+K LT
Sbjct: 238 EKQALHEDILYVAEEKNGVTVEVALQWCIDAYSDNLLGFANNIRTIDGGTHLEGLKTVLT 297
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RT+N+ +K +KD D +L GE++REGLT +ISV+VP PEFEGQTKT+LGN EVR +VD
Sbjct: 298 RTMNNFARKRNKLKDSDKNLGGENIREGLTAVISVKVPEPEFEGQTKTKLGNTEVRGIVD 357
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E L +YLE + V D+I+ K++ A KAA AA+ AR+LVR+KSVL S++LPGKLADC
Sbjct: 358 SLVGEVLKDYLEFNLGVGDAIIEKAVQAFKAAEAARHARELVRRKSVLESTTLPGKLADC 417
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
SS P ESEI++VEGDSAGGSAKQGRDR+FQ I+ PL+ I
Sbjct: 418 SSRDPAESEIYLVEGDSAGGSAKQGRDRQFQAIL-PLRGKIL 458
>gi|282896629|ref|ZP_06304644.1| DNA gyrase, B subunit [Raphidiopsis brookii D9]
gi|281198499|gb|EFA73385.1| DNA gyrase, B subunit [Raphidiopsis brookii D9]
Length = 798
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 274/465 (58%), Positives = 351/465 (75%), Gaps = 17/465 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AGY ++++V
Sbjct: 1 MTSSYSADQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGYCTHVDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L AD S +V D+GRGIP D+HP T KSALETVLTVLHAGGKFGG VSGGLHGVG
Sbjct: 61 ELNADGSCTVTDDGRGIPTDIHPKTGKSALETVLTVLHAGGKFGGGGY--KVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +++TVWR+ + Q+Y RG P T L V P D + R GT ++F PD Q+
Sbjct: 119 VSVVNALSEVVDITVWREHKVHTQRYERGAPTTEL--QVEP-DQQSRTGTSVKFKPDAQI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 309
FTT +FD+ T+AGR+RELA+LN + I+ R E + + Y + GG++EYV +
Sbjct: 176 FTTGTEFDYITLAGRLRELAYLNAGVKISFTDHRLELLKTDTPKVETYEYKGGIKEYVSY 235
Query: 310 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+N DK+ LH+ ++ + + + + +++ALQWC+DAY+D +LG+AN+IRTIDGGTH+EG+K
Sbjct: 236 INRDKQALHEEIIYVQGERNNVQVEVALQWCTDAYTDNVLGFANNIRTIDGGTHLEGLKT 295
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTRTLNS+ +K +K+ + +LSGEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTLNSIARKRNKIKENESNLSGEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+VD V E LTEYLE HP + DSIL K++ A KAA AA+ AR+LVR+KSVL SS LPGKL
Sbjct: 356 IVDSLVGEVLTEYLEFHPGIADSILDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKL 415
Query: 489 ADCSSTTPEESEIFIVEGDSAGG--------SAKQGRDRRFQVII 525
ADCSS P ESEIFIVEGDSAGG S K GR+ F +I
Sbjct: 416 ADCSSRDPAESEIFIVEGDSAGGCFVGNTLVSLKDGRNLTFTDLI 460
>gi|282899715|ref|ZP_06307679.1| DNA gyrase, B subunit [Cylindrospermopsis raciborskii CS-505]
gi|281195594|gb|EFA70527.1| DNA gyrase, B subunit [Cylindrospermopsis raciborskii CS-505]
Length = 798
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 274/465 (58%), Positives = 350/465 (75%), Gaps = 17/465 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AGY ++++V
Sbjct: 1 MTSSYSADQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGYCTHVDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L AD S +V D+GRGIP D+HP T KSALETVLTVLHAGGKFGG VSGGLHGVG
Sbjct: 61 ELNADGSCTVTDDGRGIPTDIHPKTGKSALETVLTVLHAGGKFGGGGY--KVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +++TVWR+ + Q+Y RG P T L V P D R GT ++F PD Q+
Sbjct: 119 VSVVNALSEVVDITVWREHKVHTQRYERGAPTTEL--QVEP-DQHSRTGTSVKFKPDVQI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 309
FTT I+FD+ T+AGR+RELA+LN + I+ R E + + Y + GG++EYV +
Sbjct: 176 FTTGIEFDYITLAGRLRELAYLNAGVKISFTDHRLELLKTDTPKVETYEYKGGIKEYVSY 235
Query: 310 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+N DK+ LH+ ++ + + + + +++ALQWC+DAY+D +LG+AN+IRTIDGGTH+EG+K
Sbjct: 236 INRDKQALHEEIIYVQGERNNVQVEVALQWCTDAYTDNVLGFANNIRTIDGGTHLEGLKT 295
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTRTLNS+ +K +K+ + +LSGEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTLNSIARKRNKIKENESNLSGEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+VD V E LTEYLE HP + DSIL K++ A KAA AA+ AR+LVR+KSVL SS LPGKL
Sbjct: 356 IVDSLVGEVLTEYLEFHPGIADSILDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKL 415
Query: 489 ADCSSTTPEESEIFIVEGDSAGG--------SAKQGRDRRFQVII 525
ADCSS P ESEIFIVEGDSAGG S GR+ F +I
Sbjct: 416 ADCSSRDPAESEIFIVEGDSAGGCFVGNTLVSLTDGRNLTFTDLI 460
>gi|300865369|ref|ZP_07110180.1| DNA gyrase subunit B [Oscillatoria sp. PCC 6506]
gi|300336672|emb|CBN55330.1| DNA gyrase subunit B [Oscillatoria sp. PCC 6506]
Length = 646
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 269/468 (57%), Positives = 357/468 (76%), Gaps = 16/468 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIG+TGPRGLHHLVYE++DN++DEA AG+ ++IEV
Sbjct: 1 MTSSYSADQIQVLEGLEAVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGHCTHIEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ AD SV+V D+GRGIP + T KS +ETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 DINADGSVTVTDDGRGIPTGIVAKTGKSGIETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTVWRD ++Q++ RG PVT L V ++R GT + F PD Q+
Sbjct: 119 ISVVNALSEWVEVTVWRDKKVHNQRFERGIPVTDL---VDKPSKENRSGTSVSFLPDTQI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNP--KLTIALRK----EDSDPEKNQYNEYFFAGGLEEY 306
F+T I+FD+ ++GR+RELA+LN K+T + R+ + S+P Y + GG++EY
Sbjct: 176 FSTGIEFDYTILSGRLRELAYLNAGVKITFSDRRLELLKSSEP---HIETYCYEGGIKEY 232
Query: 307 VQWLNTDKKPLHDVVGF-RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 365
+ ++N DK+PLH+ V F + + + + ++++LQWC DAYSD +LG+AN+IRTIDGGTH+EG
Sbjct: 233 IAYMNRDKQPLHEEVIFIQGERNNVQVEVSLQWCIDAYSDNVLGFANNIRTIDGGTHLEG 292
Query: 366 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 425
+KA LTRT+N++ +K +K+ + +L GE++REGLT +ISV+VP+PEFEGQTKT+LGN E
Sbjct: 293 LKAVLTRTMNAIARKRNKIKENEPNLGGENIREGLTAVISVKVPDPEFEGQTKTKLGNTE 352
Query: 426 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 485
VR +VD V E LTEYLE P V D+IL K++ A KAA AA+RARDLVR+KSVL SS LP
Sbjct: 353 VRGIVDSLVGEVLTEYLEFRPQVADTILEKAIQAFKAAEAARRARDLVRRKSVLESSPLP 412
Query: 486 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
GKLADCSS P +SEI++VEGDSAGGSAKQGRDR+FQ I+ PL+ I
Sbjct: 413 GKLADCSSRDPSKSEIYLVEGDSAGGSAKQGRDRQFQAIL-PLRGKIL 459
>gi|334120265|ref|ZP_08494347.1| DNA gyrase, B subunit [Microcoleus vaginatus FGP-2]
gi|333457053|gb|EGK85680.1| DNA gyrase, B subunit [Microcoleus vaginatus FGP-2]
Length = 646
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 268/465 (57%), Positives = 350/465 (75%), Gaps = 10/465 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIG+TGPRGLHHLVYE++DN++DEA AG+ ++IE+
Sbjct: 1 MTSSYSADQIQVLEGLEAVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGHCTHIEI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ AD SV+V D+GRGIP + T KS +ETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 DINADGSVTVTDDGRGIPTGIVAKTGKSGIETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTVWRD E+ Q+Y RG PVT L + R GT + F PD Q+
Sbjct: 119 ISVVNALSEWVEVTVWRDQKEHLQRYERGFPVTELNAKP---NKGTRTGTSVSFLPDTQI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 309
F+T I+FD+ +AGR+REL +LN + I R E + + Y + GG++EY+ +
Sbjct: 176 FSTGIEFDYTILAGRLRELGYLNAGVRITFSDHRLELLKSSEPRIETYCYEGGIKEYIAY 235
Query: 310 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+N +K+PLH+ V+ + + + + I++ALQWC DA+SD +LG+AN+IRTIDGGTH+EG+KA
Sbjct: 236 MNREKQPLHEEVIYVQGERNNVQIEVALQWCVDAFSDNVLGFANNIRTIDGGTHLEGLKA 295
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTRT+NS+ +K +K+ + +L+GE+VREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTMNSIARKRNKIKENEPNLAGENVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+VD V E LTEYLE P V D+IL K++ A KAA AA+RARDLVR+KSVL SS LPGKL
Sbjct: 356 IVDSLVGEVLTEYLEFRPQVADAILEKAIQAFKAAEAARRARDLVRRKSVLESSPLPGKL 415
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCSS P SEI++VEGDSAGGSAKQGRDR+FQ I+ PL+ I
Sbjct: 416 ADCSSRDPALSEIYLVEGDSAGGSAKQGRDRQFQAIL-PLRGKIL 459
>gi|86607821|ref|YP_476583.1| DNA gyrase subunit B [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556363|gb|ABD01320.1| DNA gyrase, B subunit [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 642
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 269/467 (57%), Positives = 350/467 (74%), Gaps = 8/467 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+++ YG+EQIQVLEGLEAVRKRP MYIGSTGP+GLHHLVYE++DN+VDEA AGY ++I++
Sbjct: 1 MTENYGAEQIQVLEGLEAVRKRPGMYIGSTGPKGLHHLVYEVVDNSVDEALAGYCNDIQI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+L D SVSV DNGRGIP+D+HP T +SAL TVLTVLHAGGKFGG S LHGVG
Sbjct: 61 SLHPDGSVSVLDNGRGIPVDIHPKTGQSALVTVLTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTVWR+G Y Q++ RG V +L P S +R+GT +RF PD +
Sbjct: 119 VSVVNALSEWVEVTVWREGKVYFQRFERGAVVGSLKSEPQPKGS-NRRGTEVRFKPDGLI 177
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LN L I DP + Y +AGG++EYV ++N
Sbjct: 178 FPER-EFDYAVLAARFRELAYLNAGLKITFSDLRRDPPHCE--TYQYAGGIKEYVAFINH 234
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K P+H D++ + + DG+ +++ALQWCSD Y+DT++G+AN+IRT +GGTH+EG+K SLT
Sbjct: 235 EKTPIHSDIIYIQGERDGVEVEVALQWCSDVYTDTLIGFANNIRTNEGGTHLEGLKTSLT 294
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
T+NS +K +KD D +L+GE+VREGLT I+SV+VPNPEFEGQTKT+LGN EVR +V
Sbjct: 295 LTINSQARKLNKLKDSDSNLAGENVREGLTAIVSVKVPNPEFEGQTKTKLGNTEVRGIVQ 354
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E LTEYLE +P+V I+ K++ + AA AA+RAR+LVR+KS L SS+LPGKLADC
Sbjct: 355 TLVSEALTEYLEFNPNVARGIVDKAIQSFNAAEAARRARELVRRKSALESSTLPGKLADC 414
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESE+++VEGDSAGGSAKQGRDR+FQ ++ PL+ I A
Sbjct: 415 SCRDPAESEVYLVEGDSAGGSAKQGRDRQFQAVL-PLRGKILNIEKA 460
>gi|86606189|ref|YP_474952.1| DNA gyrase subunit B [Synechococcus sp. JA-3-3Ab]
gi|86554731|gb|ABC99689.1| DNA gyrase, B subunit [Synechococcus sp. JA-3-3Ab]
Length = 642
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 266/467 (56%), Positives = 348/467 (74%), Gaps = 8/467 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+++ YG+EQIQVLEGLEAVR+RP MYIGSTGP+GLHHLVYE++DN+VDEA AGY + IEV
Sbjct: 1 MTENYGAEQIQVLEGLEAVRRRPGMYIGSTGPKGLHHLVYEVVDNSVDEALAGYCNEIEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L D SVSV DNGRGIP+D+HP T +SAL TV+TVLHAGGKFGG S LHGVG
Sbjct: 61 TLHPDGSVSVLDNGRGIPVDIHPKTGQSALVTVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE LE VWR+G Y Q++ RG V +L P ++ R+GT +RF PD+ +
Sbjct: 119 VSVVNALSEWLEARVWREGKVYFQRFERGAVVGSLQSEPQPAGAQ-RRGTEVRFKPDELI 177
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD++ +A R+RELA+LN L I DP + Y FAGG++EYV ++N
Sbjct: 178 FPER-EFDYSLLAARLRELAYLNAGLKIIFSDLRRDPPHREV--YQFAGGIKEYVAFINH 234
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K P+H D++ R + DG+ ++ ALQWC+D Y+DT++G+AN+IRT +GGTH+EG+K +LT
Sbjct: 235 EKTPIHPDIIYVRGERDGVEVEAALQWCADVYTDTLIGFANNIRTTEGGTHLEGLKTALT 294
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
T+NS +K +KD D +L+GE+VREGLT I++V+VPNPEFEGQTKT+LGN EVR +V
Sbjct: 295 LTINSQARKLNKLKDSDSNLAGENVREGLTAILAVKVPNPEFEGQTKTKLGNTEVRGIVQ 354
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E LTEYLE +P+V I+ K++ + AA AA+RAR+LVR+KS L SS+LPGKLADC
Sbjct: 355 TLVSEALTEYLEFNPNVARGIVEKAIQSFNAAEAARRARELVRRKSALESSTLPGKLADC 414
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESE+++VEGDSAGGSAKQGRDR+FQ ++ PL+ I A
Sbjct: 415 SCRDPAESEVYLVEGDSAGGSAKQGRDRQFQAVL-PLRGKILNIEKA 460
>gi|284928768|ref|YP_003421290.1| DNA gyrase subunit B [cyanobacterium UCYN-A]
gi|284809227|gb|ADB94932.1| DNA gyrase subunit B [cyanobacterium UCYN-A]
Length = 642
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 272/464 (58%), Positives = 347/464 (74%), Gaps = 13/464 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ YG+EQIQVLEGLE VRKRP MYIG+TGP+GLHHLVYE++DN++DEA AG+ ++IEV
Sbjct: 3 IKSDYGAEQIQVLEGLEPVRKRPGMYIGTTGPKGLHHLVYEVVDNSIDEALAGHCTHIEV 62
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ D SV+V DNGRGIP D+HPAT KSALETV+TVLHAGGKFGG S LHGVG
Sbjct: 63 DINIDGSVTVTDNGRGIPTDIHPATGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 120
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE L + VWRD Y Q+Y G V+ L D++ +GT + F PDKQ+
Sbjct: 121 ISVVNALSEWLIIKVWRDNSVYTQRYECGVAVSELKKEP---DTEHPKGTSVSFLPDKQI 177
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQ-YNE-YFFAGGLEEYVQWL 310
FT+ FD+ T++ R+RELA+LN ++TI +D K + Y+E YF+ GGL EYV ++
Sbjct: 178 FTSDTNFDYATLSARLRELAYLNSQITIKF----TDYRKQEPYSETYFYEGGLREYVTYM 233
Query: 311 NTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
+K+ LH D++ + G+ ++ AL WC DAYSD +LG+AN+IRTIDGGTH+EG+K
Sbjct: 234 CRNKEALHKDIIYICGEKKGVQVEAALLWCIDAYSDNLLGFANNIRTIDGGTHLEGLKTV 293
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
LTRT+N++ +K +K+ + +LSGE+VREGLT I+SV+VP PEFEGQTKT+LGN EVR +
Sbjct: 294 LTRTMNNVARKRNKIKENEPNLSGENVREGLTGIVSVKVPEPEFEGQTKTKLGNTEVRGI 353
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
VD V E L EYLE +P V D I+ K++ A KAA AA+RARDLVR+KSVL SS LPGKLA
Sbjct: 354 VDLLVGEVLGEYLEFNPHVGDIIIEKAVQAFKAAEAARRARDLVRRKSVLESSPLPGKLA 413
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
DCS+ P E+EIF+VEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 414 DCSTRDPAEAEIFLVEGDSAGGSAKQGRDRRFQAIL-PLRGKII 456
>gi|427734590|ref|YP_007054134.1| DNA gyrase subunit B [Rivularia sp. PCC 7116]
gi|427369631|gb|AFY53587.1| DNA gyrase, B subunit [Rivularia sp. PCC 7116]
Length = 1081
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 264/443 (59%), Positives = 337/443 (76%), Gaps = 9/443 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y +EQIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IEV
Sbjct: 1 MTSSYDAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L AD S +V D+GRGIP D+HP T KSALETVLTVLHAGGKFGG VSGGLHGVG
Sbjct: 61 ELNADGSCTVTDDGRGIPTDIHPQTGKSALETVLTVLHAGGKFGGGGY--KVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE LEVT+WR+ + Q+Y RG + L ++R GTRI F PD Q+
Sbjct: 119 VSVVNALSEWLEVTIWRNNKVHTQRYERGNAMAELKT---APSKENRTGTRISFKPDAQI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 309
FTT +FD+NT+A R+REL +LN + I+ R E + Y + GG++EYV +
Sbjct: 176 FTTVTEFDYNTLASRLRELGYLNAGVRISFTDNRLEVIKSDTPHVEVYEYKGGIKEYVAY 235
Query: 310 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+N DK+ LHD ++ + + + + +++ALQWC DAYSD++LG+AN+IRT+DGGTH+EG+K
Sbjct: 236 MNADKQSLHDEIIYVQGERNNVQVEVALQWCVDAYSDSLLGFANNIRTVDGGTHLEGLKT 295
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTRTLNS+ +K +K+ + +LSGEHVREGLT +ISV+VP PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTLNSVARKRNKIKENESNLSGEHVREGLTAVISVKVPEPEFEGQTKTKLGNTEVRG 355
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+VD V E L+EYLE HP V+D+IL K++ A KAA AA+ AR+LVR+KSVL SS LPGKL
Sbjct: 356 IVDSFVGEVLSEYLEFHPQVVDNILDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKL 415
Query: 489 ADCSSTTPEESEIFIVEGDSAGG 511
ADCSS P ESEI++VEGDSAGG
Sbjct: 416 ADCSSRDPAESEIYLVEGDSAGG 438
>gi|407958231|dbj|BAM51471.1| DNA gyrase B subunit [Bacillus subtilis BEST7613]
Length = 1076
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 265/442 (59%), Positives = 342/442 (77%), Gaps = 12/442 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ YG++QIQVLEGLE VRKRP MYIGSTGP+GLHHLVYE++DNA+DEA AGY ++IE+
Sbjct: 2 TTTNYGADQIQVLEGLEPVRKRPGMYIGSTGPKGLHHLVYEVVDNAIDEALAGYCTHIEI 61
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ AD SV+V DNGRGIP D+HP T +SALETVLTVLHAGGKFGG VSGGLHGVG
Sbjct: 62 DINADGSVTVVDNGRGIPTDIHPTTGRSALETVLTVLHAGGKFGGGGY--KVSGGLHGVG 119
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EV VWR G E+ Q++ RG P+ TL + GT++ F PD Q+
Sbjct: 120 VSVVNALSEWVEVKVWRQGKEHFQRFERGNPIGTLEA---TPNEGHSTGTQVSFLPDTQI 176
Query: 253 FTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWL 310
F I+FD++T+A R++ELA+LN ++T R+ DS E+ ++++ GG+ EYV ++
Sbjct: 177 FKDGIEFDYHTLASRLKELAYLNAGVRITFGDRRADSLKEE----QFYYEGGIREYVTYM 232
Query: 311 NTDKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
TDK PLH+ + + + + + +++ALQWC DAYSDT+LG+AN+IRTIDGGTH+EG+KA
Sbjct: 233 TTDKTPLHEEIIYTSGEKNDVQVEVALQWCVDAYSDTLLGFANNIRTIDGGTHLEGLKAV 292
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
LTRTLNS+ +K +KD D +L GE++REGLT +ISV+VP+PEFEGQTKT+LGN EVR +
Sbjct: 293 LTRTLNSVARKRNKLKDGDSNLGGENIREGLTGVISVKVPDPEFEGQTKTKLGNTEVRGI 352
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
VD V E LTE+LE +P V D+I+ K++ A KAA AA+RAR+LVR+KSVL SS+LPGKLA
Sbjct: 353 VDTLVGEALTEFLEFNPGVADAIIEKAVQAFKAAEAARRARELVRRKSVLESSTLPGKLA 412
Query: 490 DCSSTTPEESEIFIVEGDSAGG 511
DCSS P ESEIFIVEGDSAGG
Sbjct: 413 DCSSKDPSESEIFIVEGDSAGG 434
>gi|16330312|ref|NP_441040.1| DNA gyrase B subunit [Synechocystis sp. PCC 6803]
gi|383322053|ref|YP_005382906.1| DNA gyrase B subunit [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383325222|ref|YP_005386075.1| DNA gyrase B subunit [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383491106|ref|YP_005408782.1| DNA gyrase B subunit [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384436373|ref|YP_005651097.1| DNA gyrase B subunit [Synechocystis sp. PCC 6803]
gi|451814470|ref|YP_007450922.1| DNA gyrase B subunit [Synechocystis sp. PCC 6803]
gi|2501296|sp|P77966.1|GYRB_SYNY3 RecName: Full=DNA gyrase subunit B; Contains: RecName: Full=Ssp
gyrB intein
gi|1652801|dbj|BAA17720.1| DNA gyrase B subunit [Synechocystis sp. PCC 6803]
gi|339273405|dbj|BAK49892.1| DNA gyrase B subunit [Synechocystis sp. PCC 6803]
gi|359271372|dbj|BAL28891.1| DNA gyrase B subunit [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359274542|dbj|BAL32060.1| DNA gyrase B subunit [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359277712|dbj|BAL35229.1| DNA gyrase B subunit [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|451780439|gb|AGF51408.1| DNA gyrase B subunit [Synechocystis sp. PCC 6803]
Length = 1078
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 265/442 (59%), Positives = 342/442 (77%), Gaps = 12/442 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ YG++QIQVLEGLE VRKRP MYIGSTGP+GLHHLVYE++DNA+DEA AGY ++IE+
Sbjct: 4 TTTNYGADQIQVLEGLEPVRKRPGMYIGSTGPKGLHHLVYEVVDNAIDEALAGYCTHIEI 63
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ AD SV+V DNGRGIP D+HP T +SALETVLTVLHAGGKFGG VSGGLHGVG
Sbjct: 64 DINADGSVTVVDNGRGIPTDIHPTTGRSALETVLTVLHAGGKFGGGGY--KVSGGLHGVG 121
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EV VWR G E+ Q++ RG P+ TL + GT++ F PD Q+
Sbjct: 122 VSVVNALSEWVEVKVWRQGKEHFQRFERGNPIGTLEA---TPNEGHSTGTQVSFLPDTQI 178
Query: 253 FTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWL 310
F I+FD++T+A R++ELA+LN ++T R+ DS E+ ++++ GG+ EYV ++
Sbjct: 179 FKDGIEFDYHTLASRLKELAYLNAGVRITFGDRRADSLKEE----QFYYEGGIREYVTYM 234
Query: 311 NTDKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
TDK PLH+ + + + + + +++ALQWC DAYSDT+LG+AN+IRTIDGGTH+EG+KA
Sbjct: 235 TTDKTPLHEEIIYTSGEKNDVQVEVALQWCVDAYSDTLLGFANNIRTIDGGTHLEGLKAV 294
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
LTRTLNS+ +K +KD D +L GE++REGLT +ISV+VP+PEFEGQTKT+LGN EVR +
Sbjct: 295 LTRTLNSVARKRNKLKDGDSNLGGENIREGLTGVISVKVPDPEFEGQTKTKLGNTEVRGI 354
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
VD V E LTE+LE +P V D+I+ K++ A KAA AA+RAR+LVR+KSVL SS+LPGKLA
Sbjct: 355 VDTLVGEALTEFLEFNPGVADAIIEKAVQAFKAAEAARRARELVRRKSVLESSTLPGKLA 414
Query: 490 DCSSTTPEESEIFIVEGDSAGG 511
DCSS P ESEIFIVEGDSAGG
Sbjct: 415 DCSSKDPSESEIFIVEGDSAGG 436
>gi|414078408|ref|YP_006997726.1| DNA gyrase subunit B [Anabaena sp. 90]
gi|413971824|gb|AFW95913.1| DNA gyrase subunit B [Anabaena sp. 90]
Length = 1080
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 264/443 (59%), Positives = 346/443 (78%), Gaps = 9/443 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVRKRP MYIG+TGPRGLHHLVYE++DN+VDEA AG+ +++EV
Sbjct: 1 MTSSYSADQIQVLEGLEAVRKRPGMYIGTTGPRGLHHLVYEVVDNSVDEALAGHCTHVEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ AD SV+V D+GRGIP+D+HP T KSALETVLTVLHAGGKFGG VSGGLHGVG
Sbjct: 61 DINADGSVTVTDDGRGIPVDIHPKTGKSALETVLTVLHAGGKFGGGGY--KVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTVWRD ++Q+Y R VT L P + +DR GT I F PD Q+
Sbjct: 119 ISVVNALSEFVEVTVWRDHKVHNQRYERSFAVTELVA--TPYE-EDRTGTSITFKPDTQI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQW 309
FTT+I+FD+ T++GR+RELA+LN + I R E + + Y + GG++EY+ +
Sbjct: 176 FTTSIEFDYITLSGRLRELAYLNAGVRIIFTDHRLEILKSDTPRIETYEYKGGIKEYIAY 235
Query: 310 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+N +K+PLH+ ++ + + + + ++++LQWC+DAY+D +LG+AN+IRTIDGGTH+EG+KA
Sbjct: 236 MNREKQPLHEEIIYVQGERNNVQVEVSLQWCTDAYTDNVLGFANNIRTIDGGTHLEGLKA 295
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTRTLN+ +K +K+ + +LSGEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR
Sbjct: 296 VLTRTLNATARKRNKIKEGESNLSGEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRG 355
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+VD V E LTEYL+ HP + D+IL K++ A KAA AA+ AR+LVR+KSVL SS LPGKL
Sbjct: 356 IVDSFVGEVLTEYLDFHPAIADAILDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKL 415
Query: 489 ADCSSTTPEESEIFIVEGDSAGG 511
ADCSS P ESEI+IVEGDSAGG
Sbjct: 416 ADCSSRDPAESEIYIVEGDSAGG 438
>gi|428774798|ref|YP_007166585.1| DNA gyrase subunit B [Halothece sp. PCC 7418]
gi|428689077|gb|AFZ42371.1| DNA gyrase, B subunit [Halothece sp. PCC 7418]
Length = 808
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 259/440 (58%), Positives = 340/440 (77%), Gaps = 7/440 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +YG+EQIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN++DEA AGY ++IE+
Sbjct: 1 MTNSYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHIEI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L AD SV+V DNGRGIP+++H T KSALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 DLNADGSVTVTDNGRGIPVEVHSRTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EVTV R+ Y Q+Y+RG P L D GT +RF PD ++
Sbjct: 119 VSVVNALSEWVEVTVRRENTAYKQRYARGIPTHELESEP---DPSPETGTSLRFLPDTEI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FTT I+FD+NT+AGR+RELA+LN + I + +PE+ + Y + GG++EYV ++
Sbjct: 176 FTTGIEFDYNTLAGRLRELAYLNAGVRITF-TDHRNPEQPRQETYCYEGGIKEYVGYIVG 234
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K+PLH D++ + + +G+ +++ALQWC DAYSD +LG+AN+IRT+DGGTH+EG+K LT
Sbjct: 235 EKQPLHPDIIYVQGEKEGVQVEVALQWCVDAYSDNVLGFANNIRTVDGGTHLEGLKTVLT 294
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RT+N++ +K +K+ D +L+GE++REGLT +ISV+VP PEFEGQTKT+LGN EVR +VD
Sbjct: 295 RTMNNVARKRNKLKENDSNLAGENIREGLTAVISVKVPEPEFEGQTKTKLGNTEVRGIVD 354
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E LTE+L+ +P+V D+I+ K++ A KAA AA+RAR+LVR+KSVL SS LPGKLADC
Sbjct: 355 SLVGETLTEFLDFNPNVADAIIEKAVQAFKAAEAARRARELVRRKSVLESSPLPGKLADC 414
Query: 492 SSTTPEESEIFIVEGDSAGG 511
SS P ESEIFIVEGDSAGG
Sbjct: 415 SSRDPAESEIFIVEGDSAGG 434
>gi|307105660|gb|EFN53908.1| hypothetical protein CHLNCDRAFT_48978 [Chlorella variabilis]
Length = 663
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 265/484 (54%), Positives = 345/484 (71%), Gaps = 40/484 (8%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S +YG++QIQVL+GLE VRKRP MYIGSTG RGLHHLVYEILDNA+DE QAG+A+ + V
Sbjct: 17 STSYGAQQIQVLQGLEPVRKRPGMYIGSTGQRGLHHLVYEILDNAIDEVQAGFATEVHVE 76
Query: 134 LLADNS-VSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L D V+++DNGRGIP D+HP T KSALETVLTVLHAGGKFGG SSGYSVSGGLHGVG
Sbjct: 77 LNLDTGWVTISDNGRGIPTDVHPVTGKSALETVLTVLHAGGKFGGDSSGYSVSGGLHGVG 136
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
LSVVNALS+ LEV+VWR ++ Q++SRG + L ++GTR+RF D +
Sbjct: 137 LSVVNALSDELEVSVWRGRSQFSQRFSRGVAQSPL-VEAPAAAGAPKRGTRVRFIYDDTI 195
Query: 253 FT-------------TAIQFDHNTIAGRIRELAFLNPKLTIALRK----------EDSDP 289
F+ + FD +TI R+RELAFLN + TI R +++P
Sbjct: 196 FSKTHTSPRPPLLPHCSATFDPDTIRSRLRELAFLNSRATIYFRAGNGSSNGAAAAEAEP 255
Query: 290 EKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLG 349
+ + + ++GGL EYV++LN DK P+H+ + F K G+ DT++G
Sbjct: 256 D---WEVFHYSGGLAEYVRFLNRDKVPIHEPLCFSKQASGLR-----------RGDTIIG 301
Query: 350 YANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVP 409
+ NSI+TIDGGTHI+G KA+LTRT+NSLG+K K +K+ + +L+GE++REGL ++SV+VP
Sbjct: 302 FVNSIKTIDGGTHIDGTKAALTRTVNSLGRKLKAIKEGESNLAGEYIREGLGAVVSVKVP 361
Query: 410 NPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRA 469
NPEFEGQTKTRLGNPEVR++V+ V + E LE+ P ++IL+K++ A KAA AAK+A
Sbjct: 362 NPEFEGQTKTRLGNPEVRRIVEGVVSSAVGEALEMEPTTFNTILAKAMQAFKAAEAAKKA 421
Query: 470 RDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQ 529
R+LVR+KSVL S+LPGKLADCSST E+EIF+VEGDSAGGS KQ RDRR+Q ++ PL+
Sbjct: 422 RELVRRKSVLTKSTLPGKLADCSSTNRAETEIFLVEGDSAGGSTKQARDRRYQAVL-PLR 480
Query: 530 ESIF 533
I
Sbjct: 481 GKIL 484
>gi|113477398|ref|YP_723459.1| DNA gyrase subunit B [Trichodesmium erythraeum IMS101]
gi|110168446|gb|ABG52986.1| DNA gyrase subunit B [Trichodesmium erythraeum IMS101]
Length = 891
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 265/442 (59%), Positives = 337/442 (76%), Gaps = 9/442 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S YG+EQIQVLEGLEAVRKRP MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IEV
Sbjct: 3 SNNYGAEQIQVLEGLEAVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEVD 62
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
L D SV V D+GRGIP+D H T KSALETV+TVLHAGGKFGG VSGGLHGVG+
Sbjct: 63 LNKDGSVKVTDDGRGIPVDTHSKTGKSALETVMTVLHAGGKFGGGGY--KVSGGLHGVGV 120
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE +EVTVWRD + Q Y RG+P L + + R GT ++F PD+++F
Sbjct: 121 SVVNALSEWVEVTVWRDKKTHIQGYERGQPTGDLKSKP---NKEKRTGTSVQFLPDQEIF 177
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWL 310
TT IQFD+NTI GR+RELA+LN + I + R E ++ + Y + GG++EYV ++
Sbjct: 178 TTGIQFDYNTIIGRLRELAYLNAGVKITITDNRLELVKSDEPKVESYCYEGGIKEYVTYM 237
Query: 311 NTDKKPLHDVVGF-RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
N +K+ LH+ V F R + + + +++ALQWC DA+SD +LG+AN+IRTIDGGTH+EG+K
Sbjct: 238 NREKQSLHEEVIFVRGEKNDVQVEVALQWCIDAFSDNVLGFANNIRTIDGGTHLEGLKTV 297
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
LTRT+N + +K +KD D +L GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR +
Sbjct: 298 LTRTMNGIARKRNKLKDSDPNLGGENVREGLTAVISVKVPEPEFEGQTKTKLGNTEVRGI 357
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
VD V E L+EYL+ +P V D++L K++ A KAA AA+RARDLVR+KSVL SS LPGKLA
Sbjct: 358 VDSLVGEVLSEYLDFNPQVADAVLDKAIQAFKAAEAARRARDLVRRKSVLESSPLPGKLA 417
Query: 490 DCSSTTPEESEIFIVEGDSAGG 511
DCS+ PEESEI++VEGDSA G
Sbjct: 418 DCSTKNPEESEIYLVEGDSASG 439
>gi|145344184|ref|XP_001416617.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576843|gb|ABO94910.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 662
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 258/460 (56%), Positives = 341/460 (74%), Gaps = 3/460 (0%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S Y + IQVL+GLE VRKRP MYIGST +GLHHLV+E+LDN+VDE QAG+AS++ V
Sbjct: 21 SGDYDAGSIQVLQGLEPVRKRPGMYIGSTSTKGLHHLVWEVLDNSVDEVQAGHASHVRVV 80
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ + VSV D+GRGIP D+HP T KS+LETVLT+LHAGGKFGG SSGY VSGGLHGVG+
Sbjct: 81 VEENGFVSVVDDGRGIPTDVHPVTGKSSLETVLTILHAGGKFGGDSSGYHVSGGLHGVGI 140
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE +EVTVWR+G EY Q +SRG + + S ++GT IRF PD Q+F
Sbjct: 141 SVVNALSELVEVTVWRNGNEYIQSFSRGIALGPMQEKKQD-GSGQKKGTMIRFKPDDQIF 199
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
++FD I R++ELAFLN + LR D ++ + + FA GL++YV L +D
Sbjct: 200 D-KVKFDPTIIRTRMKELAFLNSGTELHLRTFDKKTKEYEDEKLLFAEGLKDYVLDLTSD 258
Query: 314 KKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
LH+ + F +DG+ ++ AL W +D+YSDT+LGYANSIRT DGGTH++G+K SLT+T
Sbjct: 259 ATRLHEPITFSGTMDGVRVEGALCWTADSYSDTLLGYANSIRTTDGGTHLDGLKYSLTKT 318
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
LN + +K+K +KD D +L G+H+REGL+ +I+V VP PEFEGQTKTRLGN EVR++V+
Sbjct: 319 LNVVSRKAKLLKDSDPNLGGDHIREGLSGVIAVWVPEPEFEGQTKTRLGNSEVRRIVENI 378
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
+ + ++E +P VL SI +K+ SA KAA AAKRAR++VR+K+VL S+ LPGKL+DCSS
Sbjct: 379 ANDAVAGHMEFNPSVLKSIFAKAQSAFKAAEAAKRAREMVRRKTVLTSNRLPGKLSDCSS 438
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
+ +++EIF+VEGDSAGGS KQGRDR FQ ++ PL+ I
Sbjct: 439 SDADQTEIFLVEGDSAGGSCKQGRDRGFQAVL-PLRGKIM 477
>gi|159464611|ref|XP_001690535.1| DNA gyrase subunit B-like protein [Chlamydomonas reinhardtii]
gi|158280035|gb|EDP05794.1| DNA gyrase subunit B-like protein [Chlamydomonas reinhardtii]
Length = 649
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 263/458 (57%), Positives = 339/458 (74%), Gaps = 8/458 (1%)
Query: 83 QVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL-LADNSVS 141
QVLEGLE VRKRP MYIG TG GLHHL++E++DNAVDE QAG+AS +EV + L+ VS
Sbjct: 1 QVLEGLEPVRKRPGMYIGGTGSDGLHHLIWEVVDNAVDEVQAGHASAVEVDVDLSSGWVS 60
Query: 142 VADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSE 201
V DNGRGIP+D+HP T KSALETVLTVLHAGGKFGG +SGY VSGGLHGVG+SVVNALS
Sbjct: 61 VVDNGRGIPVDVHPVTGKSALETVLTVLHAGGKFGGDNSGYKVSGGLHGVGISVVNALSS 120
Query: 202 SLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKD--RQGTRIRFWPDKQVFTTAIQF 259
LEVTVWR G Y Q+YSRG P+ L +LP S++ R GT++RF D +F + +
Sbjct: 121 ELEVTVWRAGSRYSQRYSRGAPLEELRVQLLPPGSEEAGRSGTQVRFLYDASIFAKDVAY 180
Query: 260 DHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD 319
+ IA R+ ELAFLN + TI R + Q+ + ++GGL E+V L PLH+
Sbjct: 181 SADVIATRLHELAFLNARATIRFRALRRGKPEGQWQVFQYSGGLREFVGCLQAAYTPLHE 240
Query: 320 --VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSL 377
VV G+ ++ ALQW +D++ + + G+ANSI T+DGGTH+EG++A LTR + L
Sbjct: 241 ALVVTRADGGSGVVVEAALQWAADSFKEEVRGFANSIHTVDGGTHMEGLRAGLTRAVTQL 300
Query: 378 GKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEY 437
G+K+K +KD D LSGEHVREGL ++SV+VPNPEFEGQTKTRLGNPEVRK+V+ +V E
Sbjct: 301 GRKAKQIKDSDPPLSGEHVREGLGAVVSVKVPNPEFEGQTKTRLGNPEVRKIVENAVYEA 360
Query: 438 LTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS--SSLPGKLADCSSTT 495
+ E+LE HP L ++ +K+L++ +AA AA++AR+LVR+K+ L + S+LPGKLADC+ST
Sbjct: 361 VGEWLEAHPAALAALCAKALTSARAAEAARKARELVRRKTSLFTGRSTLPGKLADCTSTN 420
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
EE+EI+IVEGDSAGGSAKQ RDRRFQ I+ PL+ I
Sbjct: 421 REETEIYIVEGDSAGGSAKQARDRRFQAIL-PLKGKIL 457
>gi|303273552|ref|XP_003056137.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462221|gb|EEH59513.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 629
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 258/440 (58%), Positives = 325/440 (73%), Gaps = 5/440 (1%)
Query: 97 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 156
MYIG+T +GLHHLV+E+LDN+VDE QAG+AS I V L D VSV D+GRGIP D+HPA
Sbjct: 1 MYIGNTSTKGLHHLVWEVLDNSVDEIQAGHASVITVVLEPDGFVSVEDDGRGIPTDVHPA 60
Query: 157 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 216
T S+LETVLTVLHAGGKFGG SGY VSGGLHGVG+SVVNALSE EVTVW+ G + Q
Sbjct: 61 TGVSSLETVLTVLHAGGKFGGDESGYHVSGGLHGVGISVVNALSELCEVTVWKGGKVFTQ 120
Query: 217 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 276
+SRG V +T P + + GTR+RF PD Q+F FD N I R++ELAFLN
Sbjct: 121 AFSRGYAVADMTESFEP-GADGKNGTRVRFKPDHQIFKEKASFDPNIIISRMKELAFLNS 179
Query: 277 KLTIALR---KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITID 333
T+ R + + N F GGL++YV LN + LHD + FR +V+G+ ++
Sbjct: 180 TATLKFRIPVDVHKKMTRKKANILSFPGGLKDYVVDLNMGSETLHDPITFRSEVEGVQVE 239
Query: 334 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 393
ALQW +A++DT LGYANSIRT DGG+H++G+K +LTRT+N+ +K+K +KD D +L G
Sbjct: 240 GALQWTREAFTDTTLGYANSIRTSDGGSHLDGLKFALTRTVNAQARKAKLLKDGDSNLGG 299
Query: 394 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 453
EHVREGL+ +++V VP PEFEGQTKTRLGNPEVRKVV+ + E + E+LE +P VL SI
Sbjct: 300 EHVREGLSAVLAVWVPQPEFEGQTKTRLGNPEVRKVVEAVIGEQIAEHLEFYPSVLQSIF 359
Query: 454 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 513
+K+ A KAA AAKRAR+LVR+KSVLRS SLPGKL+DCS++ P+ SEIF+VEGDSAGGSA
Sbjct: 360 NKAQQAAKAAEAAKRARELVRRKSVLRSGSLPGKLSDCSNSDPDISEIFLVEGDSAGGSA 419
Query: 514 KQGRDRRFQVIINPLQESIF 533
KQGRDRRFQ ++ PL+ I
Sbjct: 420 KQGRDRRFQAVL-PLRGKIL 438
>gi|428781266|ref|YP_007173052.1| type IIA topoisomerase subunit B [Dactylococcopsis salina PCC 8305]
gi|428695545|gb|AFZ51695.1| type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B
subunit [Dactylococcopsis salina PCC 8305]
Length = 1359
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 257/442 (58%), Positives = 341/442 (77%), Gaps = 11/442 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +YG+EQIQVLEGLE VRKRP MYIGSTGP+GLHHLVYE++DN++DEA AGY ++IE+
Sbjct: 1 MTNSYGAEQIQVLEGLEPVRKRPGMYIGSTGPKGLHHLVYEVVDNSIDEALAGYCTHIEI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ D SV+V+DNGRGIP++ H T KSALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 DINPDGSVTVSDNGRGIPVETHSRTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS +EVTV R+ Y Q+Y RG PV+ L D GT ++F PD ++
Sbjct: 119 VSVVNALSRWVEVTVRREQTAYKQRYERGIPVSELQNEP---DPSPETGTSLQFLPDTEI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWL 310
F+T I+FD+NT++GR+RELA+LN K+T + R+ +PE+++ Y + GG++EYV ++
Sbjct: 176 FSTGIEFDYNTLSGRLRELAYLNAGVKITFSDRR---NPEESRTETYCYEGGIKEYVGYM 232
Query: 311 NTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
+K+ LH D++ + +G+ +++A QWC DAYSDT+LG+AN+IRTIDGGTH+EG+K
Sbjct: 233 VGEKQALHPDIIYVEGEKEGVQVEVAFQWCIDAYSDTILGFANNIRTIDGGTHLEGLKTV 292
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
LTRT+N++ +K +K+ D +L+GE++REGLT +ISV+VP PEFEGQTKT+LGN EVR +
Sbjct: 293 LTRTMNNIARKRNKLKENDSNLAGENIREGLTAVISVKVPEPEFEGQTKTKLGNTEVRGI 352
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
VD V E LTE+LE +P+V D+IL K++ A KAA AA+RAR+LVR+KSVL SS LPGKLA
Sbjct: 353 VDSLVGETLTEFLEFNPNVADAILEKAIQAFKAAEAARRARELVRRKSVLESSPLPGKLA 412
Query: 490 DCSSTTPEESEIFIVEGDSAGG 511
DCSS P ESEIFIVEGDSAGG
Sbjct: 413 DCSSRDPAESEIFIVEGDSAGG 434
>gi|332711757|ref|ZP_08431688.1| DNA gyrase subunit A [Moorea producens 3L]
gi|332349735|gb|EGJ29344.1| DNA gyrase subunit A [Moorea producens 3L]
Length = 867
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 256/440 (58%), Positives = 334/440 (75%), Gaps = 8/440 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLE VRKRP MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IEV
Sbjct: 1 MTSSYSADQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ +D SV+V D+GRG+P D HP T KSALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 DINSDGSVTVTDDGRGVPTDTHPTTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE ++VTVWR+ E+ Q+Y RG PVT L V P K + GT + F PD ++
Sbjct: 119 VSVVNALSEWVDVTVWREKKEHTQRYERGVPVTELL--VKPY-KKTKTGTSVNFKPDTEI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FT I+FD+ T++GR+RELA+LN + I D E+ + Y + GG++EYV ++N
Sbjct: 176 FTGGIEFDYTTLSGRLRELAYLNASVRITF--SDHRLEEPRVETYHYEGGIQEYVAYMNR 233
Query: 313 DKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K LH+ ++ + + I +++ALQWC DAYSD +LG+AN+IRTIDGGTH+EG+K LT
Sbjct: 234 EKHALHEEIIYIQGERKNIQVEVALQWCIDAYSDNLLGFANNIRTIDGGTHLEGLKTVLT 293
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RT+N++ +K +K+ + +L GE++REGLT +ISV+VP PEFEGQTKT+LGN EVR +VD
Sbjct: 294 RTMNAIARKRNKIKESESNLGGENIREGLTGVISVKVPEPEFEGQTKTKLGNTEVRGIVD 353
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E LTEYL+ P V+D+IL K++ A KAA AA+RAR+LVR+KSVL SS LPGKLADC
Sbjct: 354 SLVGEVLTEYLDFRPQVVDTILEKAIQAYKAAEAARRARELVRRKSVLESSPLPGKLADC 413
Query: 492 SSTTPEESEIFIVEGDSAGG 511
SS P ESEIFIVEGDSAGG
Sbjct: 414 SSRDPGESEIFIVEGDSAGG 433
>gi|254410831|ref|ZP_05024609.1| DNA gyrase, B subunit [Coleofasciculus chthonoplastes PCC 7420]
gi|196182186|gb|EDX77172.1| DNA gyrase, B subunit [Coleofasciculus chthonoplastes PCC 7420]
Length = 856
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 258/440 (58%), Positives = 332/440 (75%), Gaps = 8/440 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ +Y ++QIQVLEGLEAVR+RP MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IEV
Sbjct: 1 MTSSYSADQIQVLEGLEAVRRRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+D SVSV D+GRGIP D H T KSALETV+TVLHAGGKFGG S LHGVG
Sbjct: 61 DFNSDGSVSVTDDGRGIPTDTHSKTGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE ++VTVWR+ + Q+Y RG + L V P ++R GT + F PD Q+
Sbjct: 119 VSVVNALSEWVDVTVWREKKVHTQRYERGIAMGELA--VKP-SKENRTGTSVTFKPDTQI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FT I+FD++T+AGR+RELA+LN + I PE + Y + GG++EYV ++N
Sbjct: 176 FTNGIEFDYSTVAGRLRELAYLNGGVRITFTDHRISPEHQ--DSYHYEGGIQEYVGYMNR 233
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
K+PLH +++ + + + + +++ALQWC DAYSD +LG+AN+IRTIDGGTH+EG+K LT
Sbjct: 234 QKEPLHQEIIYVQGERNNVQVEVALQWCVDAYSDNLLGFANNIRTIDGGTHLEGLKTVLT 293
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RTLN++ +K +K+ + +L GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD
Sbjct: 294 RTLNAIARKRNKLKESESNLGGENVREGLTGVISVKVPEPEFEGQTKTKLGNTEVRGIVD 353
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E LTEYLE P V DS+L K++ A KAA AA+RAR+LVR+KSVL SS LPGKLADC
Sbjct: 354 SLVGEVLTEYLEFRPQVADSVLEKAIQAFKAAEAARRARELVRRKSVLESSPLPGKLADC 413
Query: 492 SSTTPEESEIFIVEGDSAGG 511
SS P ESEIFIVEGDSAGG
Sbjct: 414 SSRDPAESEIFIVEGDSAGG 433
>gi|88602335|ref|YP_502513.1| DNA gyrase, B subunit [Methanospirillum hungatei JF-1]
gi|88187797|gb|ABD40794.1| DNA gyrase subunit B [Methanospirillum hungatei JF-1]
Length = 675
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 256/498 (51%), Positives = 343/498 (68%), Gaps = 37/498 (7%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+S TY SE I++L GLE VR+RPAMYIGST RGLHHLVYE++DN++DEA AGY ++I+V
Sbjct: 6 LSNTYNSENIKILRGLEPVRERPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGYCTHIQV 65
Query: 133 ALLADNSVSVADNGRGIPID-LHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 191
+ D SVSV DNGRGIPID + NK+ALETVLTVLHAGGKF ++ Y VSGGLHGV
Sbjct: 66 VIHQDGSVSVEDNGRGIPIDPMKDNDNKTALETVLTVLHAGGKFDKNT--YQVSGGLHGV 123
Query: 192 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDS-KDR----------- 239
G+SVVNALS L TVW+DG EY +SRG+P T L + KDR
Sbjct: 124 GVSVVNALSVELTATVWKDGYEYRMFFSRGQPQTDLEKKEEDFEEIKDRYIKRYGSLPDN 183
Query: 240 ----------------QGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 283
GT IRF PD ++F T I+FD++ +A R+RELAFLN +TI++
Sbjct: 184 CPETKEEFLNRYLSKISGTMIRFKPDSKIFET-IEFDYDILAHRLRELAFLNSGITISIA 242
Query: 284 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGF-RKDVDG-ITIDLALQWCS 340
E + + + + GG+ EYV++LN + +P+H+ V+ F RKD + + +D+A Q+ +
Sbjct: 243 DERCEDLEECSEVFSYEGGISEYVRYLNHEAQPIHESVISFSRKDEEARVEVDIAFQYAA 302
Query: 341 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 400
AYS+ + Y NS+ T +GGTH+EG +++LT+ +N +GK++K +KD+++SL G+ VREGL
Sbjct: 303 -AYSEKVYTYVNSVNTKEGGTHLEGFRSALTKAINKMGKENKAIKDQNLSLKGDDVREGL 361
Query: 401 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 460
T IISVR+ NP+FEGQTK +LGN EV+ +VD V L EY E HP L +I+ K++ A
Sbjct: 362 TAIISVRMANPQFEGQTKMKLGNSEVKGIVDSLVYASLCEYFEEHPKELAAIVDKAVLAY 421
Query: 461 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 520
+A AA++A++L R+KS L SS LPGKLADCS + E+SEI+IVEGDSAGGSAKQGRDRR
Sbjct: 422 QAREAARKAKELARRKSTLESSGLPGKLADCSERSAEKSEIYIVEGDSAGGSAKQGRDRR 481
Query: 521 FQVIINPLQESIFAFASA 538
FQ I+ PL+ I A
Sbjct: 482 FQAIL-PLRGKILNVEKA 498
>gi|299117008|emb|CBN73779.1| DNA topoisomerase IV subunit B [Ectocarpus siliculosus]
Length = 688
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 254/468 (54%), Positives = 327/468 (69%), Gaps = 10/468 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG++QI VLEGLE VRKRP MYIGSTGP+GLHHLV+E++DNA+DEA AGY + V
Sbjct: 38 VDGDYGADQITVLEGLEPVRKRPGMYIGSTGPKGLHHLVFEVVDNAIDEALAGYCDTVYV 97
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L D S +V DNGRGIP D+HP T KSALETVLTVLHAGGKFGG SGY VSGGLHGVG
Sbjct: 98 TLEEDGSCTVRDNGRGIPCDIHPRTKKSALETVLTVLHAGGKFGGDESGYKVSGGLHGVG 157
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ EV V R G + + RGK T +++ GT +RF PD ++
Sbjct: 158 VSVVNALSQWAEVEVVRGGKRHSLSFERGK--TQGDLFTADAGAEEAGGTAVRFLPDPEI 215
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE----DSDPEKNQYNEYFFAGGLEEYVQ 308
F T +F+ ++GR+ ELA+LN ++I + D D + Y GG++E+V+
Sbjct: 216 FKTTTEFEFERLSGRMDELAYLNAGVSIVMADARSGVDEDGNFKKTETYLHKGGVQEFVE 275
Query: 309 WLNTDKKPLH---DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 365
+ +K+ LH V+ + DG+ ++ L W SD Y+D+++ +AN IRT DGGTH+EG
Sbjct: 276 LMCKEKQHLHPDMKVIRALGERDGVQVEACLSWSSDMYTDSLVSFANGIRTGDGGTHLEG 335
Query: 366 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 425
+K+ +TRT+NS+G+KS +KD +L G+ VREGLT ++SV+VP PEFEGQTK RLGNPE
Sbjct: 336 LKSIVTRTVNSMGRKSGKLKDSQSNLGGDFVREGLTAVVSVKVPEPEFEGQTKNRLGNPE 395
Query: 426 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 485
VR +VD V E L + E HP +L +IL K+ SA AA AAK ARD+VR+KS+L S+ LP
Sbjct: 396 VRGIVDSIVGEELVKLFEWHPKILGAILDKASSAQAAAAAAKAARDMVRRKSLLTSTVLP 455
Query: 486 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
GKLADC+S P ESEI+IVEGDSA GSAKQGRDRR Q I+ PL+ I
Sbjct: 456 GKLADCASRDPVESEIYIVEGDSAAGSAKQGRDRRTQAIL-PLRGKIL 502
>gi|374307331|ref|YP_005053762.1| DNA gyrase subunit B [Filifactor alocis ATCC 35896]
gi|291165885|gb|EFE27932.1| DNA gyrase, B subunit [Filifactor alocis ATCC 35896]
Length = 638
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 252/458 (55%), Positives = 327/458 (71%), Gaps = 14/458 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG++QIQVLEGLE VRKRP MYIGSTG +GLHHLVYE++DNA+DEA AG+ I VA+
Sbjct: 11 YGADQIQVLEGLEPVRKRPGMYIGSTGAKGLHHLVYEVVDNAIDEALAGFCKTIYVAIEE 70
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
N++ V D+GRGIP ++HP T KS +ETVLTVLHAGGKFG + GY VSGGLHGVG+SVV
Sbjct: 71 GNAIRVIDDGRGIPTEVHPKTGKSTVETVLTVLHAGGKFG--TGGYKVSGGLHGVGVSVV 128
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS VTV R G Y Q++S+G T L V + GT + F PD ++F
Sbjct: 129 NALSTFFRVTVKRGGKIYVQEFSKGISETELQ----EVGVTEETGTMVEFQPDAEIFD-E 183
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+++ + T+ R+RELAFLN ++I L ED + Q E+ + GGL+E+V +LN +K P
Sbjct: 184 LEYRYETLEYRLRELAFLNKGISIVL--EDKRAGQEQKKEFSYLGGLKEFVVFLNKNKTP 241
Query: 317 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LH DV+ F K +D +++A+Q+ +DAY + + +AN+I TI+GG H+ G K +LTRT+N
Sbjct: 242 LHKDVIHFEKQIDEYYLEIAIQY-TDAYIENIYSFANNINTIEGGMHLIGFKTALTRTIN 300
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
KKS K+K+ SLSGE VREGLT IIS+++P P++EGQTKT+LGNP+VR VVD +
Sbjct: 301 DYLKKSN--KNKEESLSGEDVREGLTAIISIKLPEPQYEGQTKTKLGNPQVRSVVDSFLA 358
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
EY YLE +P V I+ K+++A A AAKRARDL R+K VL S+SLPGKLADCS
Sbjct: 359 EYFGAYLEENPQVAKIIIEKAMNARSAREAAKRARDLTRRKGVLDSTSLPGKLADCSERD 418
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P SEI+IVEGDSAGGSAKQGRDR+ Q I+ PL+ I
Sbjct: 419 PALSEIYIVEGDSAGGSAKQGRDRKTQAIL-PLRGKIL 455
>gi|289523899|ref|ZP_06440753.1| DNA gyrase, B subunit [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289502555|gb|EFD23719.1| DNA gyrase, B subunit [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 645
Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 240/465 (51%), Positives = 323/465 (69%), Gaps = 14/465 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
K Y + IQ+LEGLEAVR+RP+MYIG TG RGLHHLVYE++DNA+DEA AGY + V +
Sbjct: 17 KEYTANDIQILEGLEAVRRRPSMYIGDTGIRGLHHLVYEVVDNAIDEAMAGYCDQVSVIV 76
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
D SVSV DNGRGIP+D HP NK A E VLT+LHAGGKF + Y VSGGLHGVG+S
Sbjct: 77 YPDGSVSVEDNGRGIPVDTHPKVNKPAAEVVLTILHAGGKF--DNKAYQVSGGLHGVGVS 134
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS LE+ +WRDGME+HQ+YSRG P C + PV DR GT++ F PD +F
Sbjct: 135 VVNALSTWLELIIWRDGMEWHQRYSRGVP----QCELTPVGKADRTGTKVHFLPDDTIFE 190
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
F + ++ R+RE+AFL P L I L+ D N+ + + GG+ +V++LN DK
Sbjct: 191 EK-DFSFDVLSSRLREIAFLVPGLKIDLK----DLRNNKSVAFKYDGGVISFVEYLNRDK 245
Query: 315 KPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
PL + + + + D + +++ALQ+ +D++ + + +AN I T++GGTH+ G + +LTR
Sbjct: 246 NPLFKEPIYIKGEKDDVLVEVALQY-NDSFQERVFAFANLIHTVEGGTHVVGFRTALTRA 304
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N + ++ K +KDKD +LSG+ ++EGLT IISV++ P+FEGQTKT+LGN +VR +VD
Sbjct: 305 VNEMARRQKLLKDKDANLSGDDLKEGLTAIISVKLKEPQFEGQTKTKLGNSDVRGIVDSI 364
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
V + L +LE PD L I+ K++ A +A AAK+AR+LVR+KS LPGKLADCSS
Sbjct: 365 VYDGLMAFLEEKPDCLRPIVEKAIKARQARDAAKKARELVRRKSAFGGLDLPGKLADCSS 424
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PEE E++IVEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 425 KDPEECELYIVEGDSAGGSAKQGRNRTFQAIL-PLRGKILNVEKA 468
>gi|392406420|ref|YP_006443028.1| DNA gyrase subunit B [Anaerobaculum mobile DSM 13181]
gi|390619556|gb|AFM20703.1| DNA gyrase, B subunit [Anaerobaculum mobile DSM 13181]
Length = 645
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 244/466 (52%), Positives = 326/466 (69%), Gaps = 14/466 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y + IQ+LEGLEAVR+RP+MYIG TG RGLHHLVYE++DNA+DEA AGY +I V
Sbjct: 16 AKQYTANDIQILEGLEAVRRRPSMYIGDTGMRGLHHLVYEVVDNAIDEAMAGYCDHIVVT 75
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
L AD SVSV DNGRGIP+D+HP NK A E VLT LHAGGKF + Y VSGGLHGVG+
Sbjct: 76 LYADGSVSVEDNGRGIPVDMHPKVNKPAAEVVLTTLHAGGKF--DNKAYQVSGGLHGVGV 133
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS LE+TVWRDG+E+HQ+YSRG P + L V +R GT++ F PD +F
Sbjct: 134 SVVNALSSWLELTVWRDGIEWHQRYSRGVPQSELKA----VGKAERTGTKVHFMPDDAIF 189
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
F + ++ R+RE+AFL P +TI L+ D + N+ + + GG+ +V++LN D
Sbjct: 190 EER-DFSFDVLSARLREIAFLVPGITIELK----DLKSNKSMTFRYEGGVVSFVKYLNRD 244
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K L + + + DG+ +++ALQ+ +D++ + + +AN I T++GGTH+ G + +LTR
Sbjct: 245 KIALFAEPIYISGEKDGVLVEVALQY-NDSFQERVFAFANLIHTVEGGTHVIGFRTALTR 303
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N + ++ K +KDKD +LSG+ ++EGLT IISV++ P+FEGQTKTRLGN +VR +VD
Sbjct: 304 AINEMARRQKLLKDKDPNLSGDDLKEGLTAIISVKLKEPQFEGQTKTRLGNSDVRGIVDS 363
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
V + L LE PD L I+ K++ A +A AAK+AR+LVR+KS LPGKLADCS
Sbjct: 364 IVYDELMATLEEKPDYLRPIVEKAIKARQARDAAKKARELVRRKSAFGGLDLPGKLADCS 423
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PEE EI+IVEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 424 SKDPEECEIYIVEGDSAGGSAKQGRNRTFQAIL-PLRGKILNVEKA 468
>gi|302830013|ref|XP_002946573.1| hypothetical protein VOLCADRAFT_79115 [Volvox carteri f.
nagariensis]
gi|300268319|gb|EFJ52500.1| hypothetical protein VOLCADRAFT_79115 [Volvox carteri f.
nagariensis]
Length = 676
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 248/456 (54%), Positives = 331/456 (72%), Gaps = 6/456 (1%)
Query: 83 QVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL-LADNSVS 141
QVLEGLE VRKRP MYIG TG GLHHLV+E++DN+VDE QAG+A+ +EV + L+ V
Sbjct: 21 QVLEGLEPVRKRPGMYIGGTGSEGLHHLVWEVVDNSVDEVQAGHATRVEVQVDLSSGWVV 80
Query: 142 VADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSE 201
V D+GRGIP+D+HP T KSALETVLTVLHAGGKFGG SGY VSGGLHGVG+SVVNALSE
Sbjct: 81 VTDDGRGIPVDVHPVTGKSALETVLTVLHAGGKFGGEDSGYKVSGGLHGVGISVVNALSE 140
Query: 202 SLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSK--DRQGTRIRFWPDKQVFTTAIQF 259
L VTVWR G+ Y Q+YSRG + + L DS+ DR GT++ F D+ +F + + +
Sbjct: 141 QLTVTVWRAGVRYSQRYSRGVALEEVQRTELQPDSEEADRTGTQVCFLYDRTIFASDVSY 200
Query: 260 DHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD 319
+ + IA R+ ELAFLN T+ ++ + F+GGL E+V L + PLH+
Sbjct: 201 NPDIIATRLHELAFLNSSATMRFNATRKGQLDGEWQVFQFSGGLREFVGCLQSGYTPLHE 260
Query: 320 VVGF-RKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSL 377
+ R D G+ + ALQW +D++ + + G+ANSI T DGGTH++ ++++LTRT+ +L
Sbjct: 261 AICVSRSDPPSGVVVHAALQWAADSFREEIRGFANSIHTADGGTHLDALRSALTRTITAL 320
Query: 378 GKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEY 437
KK K +K+ D LSGEH+REGL +I+V+VPNPEFEGQTKTRLGNPEVRK+V+ +V E
Sbjct: 321 AKKMKLIKEGDPPLSGEHIREGLGAVIAVQVPNPEFEGQTKTRLGNPEVRKIVEATVAEA 380
Query: 438 LTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPE 497
+ E+LE HP L ++L K+L+A +AA AA++AR+L+R+K+ L S LPGKLADC+S +
Sbjct: 381 VGEWLEAHPADLSALLGKALTAARAADAARKARELIRRKTSLSRSMLPGKLADCTSEERD 440
Query: 498 ESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
+EI++VEGDSAGGSAKQ RDRRFQ ++ PL+ I
Sbjct: 441 RTEIYLVEGDSAGGSAKQARDRRFQAVL-PLKGKIL 475
>gi|333977511|ref|YP_004515456.1| DNA gyrase subunit B [Desulfotomaculum kuznetsovii DSM 6115]
gi|333820992|gb|AEG13655.1| DNA gyrase, B subunit [Desulfotomaculum kuznetsovii DSM 6115]
Length = 636
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 250/473 (52%), Positives = 338/473 (71%), Gaps = 20/473 (4%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E ++ YG+E+IQVLEGLEAVR+RP MYIGSTGPRGLHHLVYE++DN++DEA AG+
Sbjct: 3 EQEMNNRYGAEEIQVLEGLEAVRRRPGMYIGSTGPRGLHHLVYEVVDNSIDEAMAGFCDR 62
Query: 130 IEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 189
IEV + DNSV+V DNGRGIP+D+HP T A+ETVLT+LHAGGKFGG+ Y VSGGLH
Sbjct: 63 IEVIVHKDNSVTVIDNGRGIPVDIHPKTGLPAVETVLTMLHAGGKFGGTV--YKVSGGLH 120
Query: 190 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 249
GVG+SVVNALSE LEV + RDG YHQ+Y RGK VT L V + + GT++ F PD
Sbjct: 121 GVGVSVVNALSEWLEVEIRRDGHVYHQRYERGKAVTPLKT----VGTANATGTKVSFKPD 176
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 309
++F + F+H T++ R+REL+FLN + I R E + Q Y GG+ ++V++
Sbjct: 177 AEIFEELV-FNHETLSQRLRELSFLNRGIKIIFRDERT----GQEIVYQHDGGIRDFVRY 231
Query: 310 LNTDKKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 365
LN +K+ LH+ V G R D + +++ALQ+ ++ Y +++ Y N+I T+DGGTH G
Sbjct: 232 LNKNKEVLHNRPIYVFGER---DNVQVEVALQY-TEGYVESLFSYVNNIHTVDGGTHEAG 287
Query: 366 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 425
K++LTR +N G+K +K+ +L+GE +REGLT +ISV+VP P+FEGQTKT+LGN E
Sbjct: 288 FKSALTRVINDYGRKYNLLKNGTPALAGEDIREGLTAVISVKVPEPQFEGQTKTKLGNSE 347
Query: 426 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 485
VR +VD V + L +LE +P V I+ K+++A +A AA++AR+L R+KS L S+SLP
Sbjct: 348 VRGIVDTVVADGLATFLEENPGVARRIMDKAITAARAREAARKARELTRRKSALESASLP 407
Query: 486 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
GKLADCS P ++E+++VEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 408 GKLADCSDRDPSKTELYLVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNVEKA 459
>gi|357419158|ref|YP_004932150.1| DNA gyrase subunit B [Thermovirga lienii DSM 17291]
gi|355396624|gb|AER66053.1| DNA gyrase subunit B [Thermovirga lienii DSM 17291]
Length = 635
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/466 (51%), Positives = 325/466 (69%), Gaps = 14/466 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y ++ IQ+LEGLEAVR+RP MYIG T RGLHHLVYE++DN+VDEA AG+ + IEV
Sbjct: 5 AKQYTAQDIQILEGLEAVRRRPGMYIGDTTTRGLHHLVYEVVDNSVDEALAGWCNRIEVI 64
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ D VSV DNGRGIPID HP T K A E VLT LHAGGKF Y VSGGLHGVG+
Sbjct: 65 IHEDGHVSVEDNGRGIPIDPHPITGKPAAEVVLTTLHAGGKF--DKKAYQVSGGLHGVGV 122
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE L +TVWRDG E+ Q Y RGKPV+ L C +S +++GT I F PD ++F
Sbjct: 123 SVVNALSEWLNLTVWRDGREWRQSYRRGKPVSELCCG----ESTNKRGTLIEFKPDGEIF 178
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
F + ++ R RE+AFLNP LTI L+ S EK + + GG+ +V++LN
Sbjct: 179 EETT-FSWDILSSRFREMAFLNPGLTIILKDRISGKEKT----FHYEGGISSFVEYLNKG 233
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K PL V + + DG+++++ LQ+ +D+Y + + +AN I T++GGTH+ G + +LTR
Sbjct: 234 KNPLFTPPVVVKGEKDGVSVEIGLQY-NDSYLERVFAFANLIHTVEGGTHVSGFRTALTR 292
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N + +++K +KDKD +LSG+ ++EGLT +ISV++P P+FEGQTKT+LGN E++ +VD
Sbjct: 293 AINEMARRNKLLKDKDPNLSGDDLKEGLTAVISVKLPEPQFEGQTKTKLGNGEIKGIVDS 352
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ L ++ P++L ++ K++ A A AAK+AR+LVR+K+ L LPGKLADCS
Sbjct: 353 IFYDGLMVEIDERPEILKPVVEKAIKARLAREAAKKARELVRRKTALAGLDLPGKLADCS 412
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PEESE+FIVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 413 SRNPEESELFIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 457
>gi|1622792|gb|AAC44498.1| DNA topoisomerase II subunit B [Thermotoga maritima MSB8]
Length = 636
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 245/465 (52%), Positives = 328/465 (70%), Gaps = 22/465 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +E I+VL+GLE VR RP MYIGSTG RGLHHLVYE++DN+VDEA AGY I V L
Sbjct: 4 YSAESIKVLKGLEPVRMRPGMYIGSTGKRGLHHLVYEVVDNSVDEALAGYCDWIRVTLHE 63
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV V DNGRGIP+D+HP +SALE V TVLHAGGKF S Y +SGGLHGVG+SVV
Sbjct: 64 DGSVEVEDNGRGIPVDIHPEEGRSALEVVFTVLHAGGKF--SKDSYKISGGLHGVGVSVV 121
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LEV V RDG Y Q+Y RGKPVT + + D+ GT +RF PD +F+
Sbjct: 122 NALSEWLEVRVHRDGKIYRQRYERGKPVTPMEV----IGETDKHGTIVRFKPDPLIFSET 177
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+FD + + R+RE+AFL P L I E D + + F GG+ EYV++LN KK
Sbjct: 178 -EFDPDILEHRLREIAFLVPGLKI----EFEDRINGEKKTFKFDGGIVEYVKYLNRGKKA 232
Query: 317 LHDVVGFRKDV--------DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
LHDV+ ++ D + +++A Q+ +D+YS+ ++ +AN+I+T+DGGTH+ K+
Sbjct: 233 LHDVIHIKRTEKVKTKNGEDEVIVEIAFQY-TDSYSEDIVSFANTIKTVDGGTHVTAFKS 291
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
+LTR +N GKK +K KD S GE VREGLT +ISV V NPEFEGQTK++LGN EV++
Sbjct: 292 TLTRLMNEYGKKHNFLK-KDDSFQGEDVREGLTAVISVYVKNPEFEGQTKSKLGNEEVKE 350
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
V ++++E L + + +P+++ +ILSK +S +A AAKRAR++VR+K+VL++++LPGKL
Sbjct: 351 AVTKAMREELKKIFDANPELVKTILSKIMSTKQAREAAKRAREMVRRKNVLQNTTLPGKL 410
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCSST E++E+FIVEGDSAGGSAKQ RDR FQ ++ P++ I
Sbjct: 411 ADCSSTHREKTELFIVEGDSAGGSAKQARDREFQAVL-PIRGKIL 454
>gi|217967929|ref|YP_002353435.1| DNA gyrase subunit B [Dictyoglomus turgidum DSM 6724]
gi|217337028|gb|ACK42821.1| DNA gyrase, B subunit [Dictyoglomus turgidum DSM 6724]
Length = 635
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 246/462 (53%), Positives = 332/462 (71%), Gaps = 14/462 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ IQ+LEG EAVR+RP MYIG TG RGLHHL++E++DN++DE AGY + I V L
Sbjct: 9 YTADSIQILEGTEAVRRRPGMYIGDTGIRGLHHLIFELVDNSIDEVMAGYCNYILVELKK 68
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV VADNGRGIP+D+HP K ALE VLT LHAGGKF S+S Y +SGGLHGVGLSVV
Sbjct: 69 DGSVVVADNGRGIPVDIHPQAKKPALEVVLTTLHAGGKF--SNSIYKISGGLHGVGLSVV 126
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS LEV V RDG ++Q Y +GKPV LT D GT+IRF+PD ++F T
Sbjct: 127 NALSSKLEVEVMRDGKIFYQGYEKGKPVMPLTVR----GETDETGTKIRFYPDSEIFETT 182
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+FD++ +A R+RELAFLNP +TI LR E + + N + + GGL E++++L+ K+
Sbjct: 183 -KFDYDIVANRLRELAFLNPNVTIELRDERT----GKSNVFKYEGGLLEFIEYLSKGKEI 237
Query: 317 LHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNS 376
LH+ + R++ + + +++ +Q+ S Y + +L YAN+I TI+GGTH+ G + +LTR +N+
Sbjct: 238 LHEPIYMRREEENLIVEIVMQYNS-GYDELILSYANNIHTIEGGTHVTGFRTALTRVVNN 296
Query: 377 LGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQE 436
+ K+ + SLSG+ VREGLT I+SV+VP+P+FEGQTKT+LGN EVRK V++ V+E
Sbjct: 297 FARNWGLWKENE-SLSGDDVREGLTAIVSVKVPDPQFEGQTKTKLGNTEVRKFVEKVVEE 355
Query: 437 YLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTP 496
LTEY +P+V I+SK + A +A AA++AR+LVR+KS+L SS LPGKLADCS P
Sbjct: 356 ELTEYFSENPEVGKLIISKIIEAYRARQAARKARELVRRKSLLESSLLPGKLADCSERDP 415
Query: 497 EESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
E+ E+FIVEG+SAGGSAKQ RDRR+Q I+ PL+ I A
Sbjct: 416 EKCELFIVEGESAGGSAKQARDRRYQAIL-PLRGKILNVEKA 456
>gi|15643596|ref|NP_228642.1| DNA gyrase, subunit B [Thermotoga maritima MSB8]
gi|418044997|ref|ZP_12683093.1| DNA gyrase, B subunit [Thermotoga maritima MSB8]
gi|6831559|sp|P77993.2|GYRB_THEMA RecName: Full=DNA gyrase subunit B; AltName: Full=Topoisomerase II
subunit B
gi|4981365|gb|AAD35915.1|AE001750_9 DNA gyrase, subunit B [Thermotoga maritima MSB8]
gi|351678079|gb|EHA61226.1| DNA gyrase, B subunit [Thermotoga maritima MSB8]
Length = 636
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 245/465 (52%), Positives = 328/465 (70%), Gaps = 22/465 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +E I+VL+GLE VR RP MYIGSTG RGLHHLVYE++DN+VDEA AGY I V L
Sbjct: 4 YSAESIKVLKGLEPVRMRPGMYIGSTGKRGLHHLVYEVVDNSVDEALAGYCDWIRVTLHE 63
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV V DNGRGIP+D+HP +SALE V TVLHAGGKF S Y +SGGLHGVG+SVV
Sbjct: 64 DGSVEVEDNGRGIPVDIHPEEGRSALEVVFTVLHAGGKF--SKDSYKISGGLHGVGVSVV 121
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LEV V RDG Y Q+Y RGKPVT + + D+ GT +RF PD +F+
Sbjct: 122 NALSEWLEVRVHRDGKIYRQRYERGKPVTPVEV----IGETDKHGTIVRFKPDPLIFSET 177
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+FD + + R+RE+AFL P L I E D + + F GG+ EYV++LN KK
Sbjct: 178 -EFDPDILEHRLREIAFLVPGLKI----EFEDRINGEKKTFKFDGGIVEYVKYLNRGKKA 232
Query: 317 LHDVVGFRKDV--------DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
LHDV+ ++ D + +++A Q+ +D+YS+ ++ +AN+I+T+DGGTH+ K+
Sbjct: 233 LHDVIHIKRTEKVKTKNGEDEVIVEIAFQY-TDSYSEDIVSFANTIKTVDGGTHVTAFKS 291
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
+LTR +N GKK +K KD S GE VREGLT +ISV V NPEFEGQTK++LGN EV++
Sbjct: 292 TLTRLMNEYGKKHNFLK-KDDSFQGEDVREGLTAVISVYVKNPEFEGQTKSKLGNEEVKE 350
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
V ++++E L + + +P+++ +ILSK +S +A AAKRAR++VR+K+VL++++LPGKL
Sbjct: 351 AVTKAMREELKKIFDANPELVKTILSKIMSTKQAREAAKRAREMVRRKNVLQNTTLPGKL 410
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCSST E++E+FIVEGDSAGGSAKQ RDR FQ ++ P++ I
Sbjct: 411 ADCSSTHREKTELFIVEGDSAGGSAKQARDREFQAVL-PIRGKIL 454
>gi|403252574|ref|ZP_10918883.1| DNA gyrase subunit B [Thermotoga sp. EMP]
gi|402812064|gb|EJX26544.1| DNA gyrase subunit B [Thermotoga sp. EMP]
Length = 636
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/465 (52%), Positives = 328/465 (70%), Gaps = 22/465 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +E I+VL+GLE VR RP MYIGSTG RGLHHLVYE++DN+VDEA AGY I V L
Sbjct: 4 YSAESIKVLKGLEPVRMRPGMYIGSTGKRGLHHLVYEVVDNSVDEALAGYCDWIRVTLHE 63
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV + DNGRGIP+D+HP +SALE V TVLHAGGKF S Y +SGGLHGVG+SVV
Sbjct: 64 DGSVEIEDNGRGIPVDIHPEEGRSALEVVFTVLHAGGKF--SKDSYKISGGLHGVGVSVV 121
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LEV V RDG Y Q+Y RGKPVT + + D+ GT +RF PD +F+
Sbjct: 122 NALSEWLEVRVHRDGKIYRQRYERGKPVTPVEV----IGETDKHGTIVRFKPDPLIFSET 177
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+FD + + R+RE+AFL P L I E D + + F GG+ EYV++LN KK
Sbjct: 178 -EFDPDILEHRLREIAFLVPGLKI----EFEDRINGEKKTFKFDGGIVEYVKYLNRGKKA 232
Query: 317 LHDVVGFRKDV--------DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
LHDV+ ++ D + +++A Q+ +D+YS+ ++ +AN+I+T+DGGTH+ K+
Sbjct: 233 LHDVIHIKRTEKVKTKNGEDEVIVEIAFQY-TDSYSEDIVSFANTIKTVDGGTHVTAFKS 291
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
+LTR +N GKK +K KD S GE VREGLT +ISV V NPEFEGQTK++LGN EV++
Sbjct: 292 TLTRLMNEYGKKHNFLK-KDDSFQGEDVREGLTAVISVYVKNPEFEGQTKSKLGNEEVKE 350
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
V ++++E L + + +P+++ +ILSK +S +A AAKRAR++VR+K+VL++++LPGKL
Sbjct: 351 AVTKAMREELKKIFDANPELVKTILSKIMSTKQAREAAKRAREMVRRKNVLQNTTLPGKL 410
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCSST E++E+FIVEGDSAGGSAKQ RDR FQ ++ P++ I
Sbjct: 411 ADCSSTNREKTELFIVEGDSAGGSAKQARDREFQAVL-PIRGKIL 454
>gi|170287901|ref|YP_001738139.1| DNA gyrase subunit B [Thermotoga sp. RQ2]
gi|170175404|gb|ACB08456.1| DNA gyrase, B subunit [Thermotoga sp. RQ2]
Length = 636
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 244/465 (52%), Positives = 327/465 (70%), Gaps = 22/465 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +E I+VL+GLE VR RP MYIGSTG RGLHHLVYE++DN+VDE AGY I V L
Sbjct: 4 YSAESIKVLKGLEPVRMRPGMYIGSTGKRGLHHLVYEVVDNSVDEVLAGYCDWIRVTLHE 63
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV V DNGRGIP+D+HP +SALE V TVLHAGGKF S Y +SGGLHGVG+SVV
Sbjct: 64 DGSVEVEDNGRGIPVDIHPEEGRSALEVVFTVLHAGGKF--SKDSYKISGGLHGVGVSVV 121
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LEV V RDG Y Q+Y RGKPVT + + D+ GT +RF PD +F+
Sbjct: 122 NALSEWLEVRVHRDGKIYRQRYERGKPVTPVEV----IGETDKHGTIVRFKPDPLIFSET 177
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+FD + + R+RE+AFL P L I E D + + F GG+ EYV++LN KK
Sbjct: 178 -EFDPDILEHRLREIAFLVPGLKI----EFEDRINGEKKTFKFDGGIVEYVKYLNRGKKA 232
Query: 317 LHDVVGFRKDV--------DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
LHDV+ ++ D + +++A Q+ +D+YS+ ++ +AN+I+T+DGGTH+ K+
Sbjct: 233 LHDVIHIKRTEKVKTKNGEDEVIVEIAFQY-TDSYSEDIVSFANTIKTVDGGTHVTAFKS 291
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
+LTR +N GKK +K KD S GE VREGLT +ISV V NPEFEGQTK++LGN EV++
Sbjct: 292 TLTRLMNEYGKKHNFLK-KDDSFQGEDVREGLTAVISVYVKNPEFEGQTKSKLGNEEVKE 350
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
V ++++E L + + +P+++ +ILSK +S +A AAKRAR++VR+K+VL++++LPGKL
Sbjct: 351 AVTKAMREELKKIFDANPELVKTILSKIMSTKQAREAAKRAREMVRRKNVLQNTTLPGKL 410
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCSST E++E+FIVEGDSAGGSAKQ RDR FQ ++ P++ I
Sbjct: 411 ADCSSTHREKTELFIVEGDSAGGSAKQARDREFQAVL-PIRGKIL 454
>gi|148269239|ref|YP_001243699.1| DNA gyrase subunit B [Thermotoga petrophila RKU-1]
gi|147734783|gb|ABQ46123.1| DNA gyrase subunit B [Thermotoga petrophila RKU-1]
Length = 636
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 244/465 (52%), Positives = 327/465 (70%), Gaps = 22/465 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +E I+VL+GLE VR RP MY+GSTG RGLHHLVYE++DN+VDEA AGY I V L
Sbjct: 4 YSAESIKVLKGLEPVRMRPGMYVGSTGKRGLHHLVYEVVDNSVDEALAGYCDWIRVTLHE 63
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV V DNGRGIP+D+HP +SALE V TVLHAGGKF S Y +SGGLHGVG+SVV
Sbjct: 64 DGSVEVEDNGRGIPVDIHPEEGRSALEVVFTVLHAGGKF--SKDSYKISGGLHGVGVSVV 121
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LEV V RDG Y Q+Y RGKPVT + + D+ GT +RF PD +F+
Sbjct: 122 NALSEWLEVRVHRDGKIYRQRYERGKPVTPVEV----IGETDKHGTIVRFKPDPLIFSET 177
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+FD + + R+RE+AFL P L I E D + + F GG+ EYV++LN KK
Sbjct: 178 -EFDPDVLEHRLREIAFLVPGLKI----EFEDRINGEKKTFKFDGGIVEYVKYLNRGKKA 232
Query: 317 LHDVVGFRKDV--------DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
LHDV+ ++ D + +++A Q+ +D+YS+ ++ +AN+I+T+DGGTH+ K+
Sbjct: 233 LHDVIHIKRTEKVKTKNGEDEVIVEIAFQY-TDSYSEDIVSFANTIKTVDGGTHVTAFKS 291
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
+LTR +N GKK +K KD S GE VREGLT +ISV V NPEFEGQTK++LGN EV++
Sbjct: 292 TLTRLMNEYGKKHNFLK-KDDSFQGEDVREGLTAVISVYVKNPEFEGQTKSKLGNEEVKE 350
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
V ++++E L + + + D++ +ILSK +S +A AAKRAR++VR+K+VL++++LPGKL
Sbjct: 351 AVTKAMREELKKIFDANSDLVKAILSKIMSTKQAREAAKRAREMVRRKNVLQNTALPGKL 410
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCSST E++E+FIVEGDSAGGSAKQ RDR FQ ++ P++ I
Sbjct: 411 ADCSSTHREKTELFIVEGDSAGGSAKQARDREFQAVL-PIRGKIL 454
>gi|405984209|ref|ZP_11042512.1| DNA gyrase, B subunit [Slackia piriformis YIT 12062]
gi|404388041|gb|EJZ83125.1| DNA gyrase, B subunit [Slackia piriformis YIT 12062]
Length = 649
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 244/459 (53%), Positives = 318/459 (69%), Gaps = 9/459 (1%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y IQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AG+ + I+V +
Sbjct: 9 YDGSDIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGFCTKIDVTIHE 68
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNS++V DNGRGIPID HP +E VLT+LHAGGKFGG GY VSGGLHGVG+S V
Sbjct: 69 DNSITVVDNGRGIPIDEHPKEKIPTVEVVLTILHAGGKFGGE--GYKVSGGLHGVGVSCV 126
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS LEV V RDG Y + RGK V L + + GT+ FWPD +VFT
Sbjct: 127 NALSTRLEVEVKRDGGLYFIAFERGKTVEKLR----RIGDAEGTGTKTTFWPDPEVFTET 182
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKE-DSDPEKNQYNEYF-FAGGLEEYVQWLNTDK 314
+ +D++T+A R RE+AFLN L I L E D D +E F FAGG+ ++V ++N K
Sbjct: 183 LVYDYSTLAQRFREMAFLNKGLHIELTDERDLDGSGKPKSETFQFAGGIVDFVNYINEGK 242
Query: 315 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+ L+ + F + D T+++A+QW S S+ +L +AN+I T +GGTH++G K +LTRT+
Sbjct: 243 ETLNKPIYFEAESDDGTVEIAMQWSSSYSSNGILAFANNINTHEGGTHLDGFKNALTRTI 302
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N + +K+KD +LSG+ REGL IISV++ +P+FEGQTKT+LGN E+R +V +V
Sbjct: 303 NDYARTHGILKEKDSNLSGDDTREGLAAIISVKLHDPQFEGQTKTKLGNTEIRGLVQGAV 362
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
+ L E+LE +P I+ K+ ALKA AA++AR++ R+K VL S S+PGKLADCSS
Sbjct: 363 TKGLAEFLEENPAPAKRIIGKATQALKAREAARKAREMTRRKGVLDSFSMPGKLADCSSK 422
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P SEIFIVEGDSAGGSAKQ RDR++Q I+ PL+ I
Sbjct: 423 DPALSEIFIVEGDSAGGSAKQARDRKYQAIL-PLRGKIL 460
>gi|402570644|ref|YP_006619987.1| DNA gyrase subunit B [Desulfosporosinus meridiei DSM 13257]
gi|402251841|gb|AFQ42116.1| DNA gyrase subunit B [Desulfosporosinus meridiei DSM 13257]
Length = 644
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 241/467 (51%), Positives = 332/467 (71%), Gaps = 12/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+S Y + QI+VLEGLEAVRKRP MYIG+TGPRGLHHLVYEI+DN++DEA AG+ + I+V
Sbjct: 12 ISDNYNAGQIEVLEGLEAVRKRPGMYIGTTGPRGLHHLVYEIVDNSIDEALAGFCNEIDV 71
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V DNGRGIP+D+HP T K +E LTVLHAGGKFGGS S Y VSGGLHGVG
Sbjct: 72 IIHQDNSITVVDNGRGIPVDIHPKTGKPGVELALTVLHAGGKFGGSESAYKVSGGLHGVG 131
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
LSVVNALS+ L V V + G YHQ+YS GKP T L + V ++ GT+I F PD ++
Sbjct: 132 LSVVNALSKWLVVEVSKGGHVYHQEYSIGKPTTKL----INVGETNKSGTKISFMPDSEI 187
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F + +D N +A R+REL+FLN +TI L E +D ++ + GG++++V++LN
Sbjct: 188 FEETV-YDFNILAHRLRELSFLNKSVTINLTDERTDVKET----FLHTGGIQDFVRYLNK 242
Query: 313 DKKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K LH F + + D + +++ +Q+ +D Y++ + YAN+I T +GGTH G K++LT
Sbjct: 243 NKDCLHPQPIFIETLKDSVQVEVCMQY-NDGYAENLFSYANNINTQEGGTHEAGFKSALT 301
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R +N +K+ +K D +L+G+ +REGLT +ISV+VP+P+FEGQTKT+LGN E+R +VD
Sbjct: 302 RVVNDYARKNNMIKAGDSNLTGDDIREGLTAVISVKVPDPQFEGQTKTKLGNSEIRGIVD 361
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+ E L+ +LE +P + + KS+ A +A AA++AR+L R+KS L +SLPGKLADC
Sbjct: 362 SATGEGLSTFLEENPSIARKFIDKSVQAARARDAARKARELTRRKSALEGTSLPGKLADC 421
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P+ E++IVEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 422 SWKEPDLCEMYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIINVEKA 467
>gi|310657321|ref|YP_003935042.1| DNA gyrase (subunit B) [[Clostridium] sticklandii]
gi|308824099|emb|CBH20137.1| DNA gyrase (subunit B) [[Clostridium] sticklandii]
Length = 641
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 240/465 (51%), Positives = 329/465 (70%), Gaps = 12/465 (2%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
EN V+ YG+EQIQVLEGL+ VRKRP MYIGSTG RGLHHLVYE++DNA+DEA AG+
Sbjct: 5 ENKVNHAYGAEQIQVLEGLDPVRKRPGMYIGSTGSRGLHHLVYEVVDNAIDEALAGHCDK 64
Query: 130 IEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 189
I V++ DN ++V DNGRGIP+++HP T KS +ETVLTVLHAGGKFG + GY VSGGLH
Sbjct: 65 IYVSIDPDNGITVKDNGRGIPVEIHPKTGKSTVETVLTVLHAGGKFG--AGGYKVSGGLH 122
Query: 190 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 249
GVG+SVVNALS+ L V V +G Y Q+++ G P T L V +GT +RF PD
Sbjct: 123 GVGVSVVNALSKELIVEVKINGKIYRQEFAYGVPQTELEI----VGETTERGTCVRFMPD 178
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 309
VF Q+ ++T+ R+RELAFLN + I L ED + + E+ + GGL E+V++
Sbjct: 179 DAVFEET-QYKYDTLEHRLRELAFLNKGIHITL--EDKREDLQKVKEFHYTGGLVEFVRY 235
Query: 310 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+N +K P+HD V+ F K T+++A+Q+ +DAY + + +AN+I T +GG H+ G K
Sbjct: 236 INKNKSPIHDDVIYFEKKQGDYTVEIAMQY-TDAYVENVYSFANNINTHEGGMHLTGFKT 294
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
+LTR +N KKS +K K+ +L GE +REGLT ++S+++P+P++EGQTKT+LGNP+ R
Sbjct: 295 ALTRVINDYAKKSNFLKSKEDNLMGEDIREGLTAVVSIKLPDPQYEGQTKTKLGNPQARS 354
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
V+ + +T +L+ +P I+ K+L A +A AAK+AR+L R+KSVL S+SLPGKL
Sbjct: 355 AVETISGDNITIFLDENPASARIIVDKALRAQRAREAAKKARELTRRKSVLESTSLPGKL 414
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADC+ P +SEI++VEGDSAGGSAKQGRDR+ Q I+ PL+ I
Sbjct: 415 ADCAEKDPVKSEIYLVEGDSAGGSAKQGRDRKTQAIL-PLRGKIL 458
>gi|269791748|ref|YP_003316652.1| DNA gyrase subunit B [Thermanaerovibrio acidaminovorans DSM 6589]
gi|269099383|gb|ACZ18370.1| DNA gyrase, B subunit [Thermanaerovibrio acidaminovorans DSM 6589]
Length = 636
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 239/468 (51%), Positives = 323/468 (69%), Gaps = 13/468 (2%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
PVS+ Y ++ IQVLEGL AVRKRP MYIG G RGLHHLVYE++DNA+DEA AG+ ++
Sbjct: 4 PVSQ-YTAKDIQVLEGLSAVRKRPGMYIGDQGQRGLHHLVYEVVDNAIDEAMAGFCDTVQ 62
Query: 132 VALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 191
V + D SVSV DNGRGIP ++HP + A E VLTVLHAG KF Y VSGGLHGV
Sbjct: 63 VTVHPDGSVSVEDNGRGIPTEMHPTMGRPAAEVVLTVLHAGAKF--DKKAYQVSGGLHGV 120
Query: 192 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 251
G+SVVNALSE LEVT+WR+G E+ Q Y RG PVT L + DR+GT++ F PD +
Sbjct: 121 GVSVVNALSEWLEVTIWRNGKEHRQSYRRGVPVTDLIAG----EDTDRRGTKVHFMPDGE 176
Query: 252 VFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLN 311
+F+T ++F +T+ GR+RELAFLNP +TI R DP + + F GG+ +V++LN
Sbjct: 177 IFST-LEFSADTLIGRLRELAFLNPGVTIVFRDLRQDPPMER--KLHFEGGIRSFVEYLN 233
Query: 312 TDKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 370
K+ L + + + DG+ +++ALQ+ +D Y + + +AN I T++GGTH+ G + +L
Sbjct: 234 RGKEVLFSPPMVVKGEKDGVIVEVALQY-NDTYLERIFAFANLINTVEGGTHVSGFRTAL 292
Query: 371 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
TR +N +K K +KDKD + +G+ ++EGLT +ISV++ P+FEGQTKT+LGN +V+ +V
Sbjct: 293 TRLINDQARKEKLLKDKDPNFTGDDLKEGLTAVISVKLLEPQFEGQTKTKLGNGDVKGIV 352
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
D V E L LE P +L ++ K++ A +A AAK+ARDLVR+KS + LPGKLAD
Sbjct: 353 DSVVYEGLKVILEDQPQILRPVVEKAVKARQAREAAKKARDLVRRKSAMSGMDLPGKLAD 412
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
CS+ PEE E++IVEGDSAGGSAK GRDR FQ I+ PL+ I A
Sbjct: 413 CSNRRPEECELYIVEGDSAGGSAKMGRDRSFQAIL-PLRGKILNVEKA 459
>gi|374578727|ref|ZP_09651821.1| DNA gyrase, B subunit [Desulfosporosinus youngiae DSM 17734]
gi|374414809|gb|EHQ87244.1| DNA gyrase, B subunit [Desulfosporosinus youngiae DSM 17734]
Length = 644
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 244/474 (51%), Positives = 333/474 (70%), Gaps = 15/474 (3%)
Query: 69 KENPVSKT---YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAG 125
KE V +T Y +EQI+VLEGLEAVRKRP MYIG+TG RGLHHLVYEI+DN++DEA AG
Sbjct: 5 KEQLVQETCDHYNAEQIEVLEGLEAVRKRPGMYIGTTGLRGLHHLVYEIVDNSIDEALAG 64
Query: 126 YASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVS 185
+ I+V + DNS++V DNGRGIP+D+HP T K A+E LTVLHAGGKFGGS S Y VS
Sbjct: 65 FCDKIDVFIHEDNSITVVDNGRGIPVDIHPKTGKPAVEVALTVLHAGGKFGGSESAYKVS 124
Query: 186 GGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIR 245
GGLHGVGLSVVNALSE L V V + G Y Q+Y++GKP T L + + + + GT+I+
Sbjct: 125 GGLHGVGLSVVNALSEWLVVEVSKGGHVYRQEYAKGKPTTEL----IKIRTNETSGTKIK 180
Query: 246 FWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEE 305
F PD ++F + +D N +A R+REL+FLN +TI L +D N + +GG+++
Sbjct: 181 FMPDSEIFEDTV-YDFNILAHRLRELSFLNKSITINL----ADERSNVKETFLHSGGIQD 235
Query: 306 YVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 364
+V +LN K LH + + D + +++ +Q+ +D+Y++ + YAN+I T +GGTH
Sbjct: 236 FVIYLNKSKDCLHPLPIYIETTKDNVQVEVCIQY-NDSYAENLFSYANNINTQEGGTHEA 294
Query: 365 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 424
G K++LTR +N +K+ +K D +LSG+ +REGLT +ISV+VP+P+FEGQTKT+LGN
Sbjct: 295 GFKSALTRVVNDYARKNNMLKATDSNLSGDDIREGLTAVISVKVPDPQFEGQTKTKLGNS 354
Query: 425 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 484
E+R +VD + E LT +LE +P + + KS+ A +A AA++AR+L R+KS L +SL
Sbjct: 355 EIRGIVDSATGEGLTIFLEENPAIARKFIDKSVQAARARDAARKARELTRRKSALEGTSL 414
Query: 485 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PGKLADCS P+ E++IVEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 415 PGKLADCSWKEPDLCEMYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNVEKA 467
>gi|257789784|ref|YP_003180390.1| DNA gyrase subunit B [Eggerthella lenta DSM 2243]
gi|317489247|ref|ZP_07947764.1| DNA gyrase, subunit B [Eggerthella sp. 1_3_56FAA]
gi|325832276|ref|ZP_08165275.1| DNA gyrase, B subunit [Eggerthella sp. HGA1]
gi|257473681|gb|ACV54001.1| DNA gyrase, B subunit [Eggerthella lenta DSM 2243]
gi|316911648|gb|EFV33240.1| DNA gyrase, subunit B [Eggerthella sp. 1_3_56FAA]
gi|325486112|gb|EGC88566.1| DNA gyrase, B subunit [Eggerthella sp. HGA1]
Length = 648
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 242/464 (52%), Positives = 320/464 (68%), Gaps = 8/464 (1%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y IQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DNAVDEA AGY I+V +
Sbjct: 8 YDGSDIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNAVDEALAGYCDEIKVWIHQ 67
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNS+SV DNGRGIPID HP +E VLT+LHAGGKFGG GY VSGGLHGVG+SVV
Sbjct: 68 DNSISVDDNGRGIPIDKHPKEKIPTVEVVLTILHAGGKFGGE--GYKVSGGLHGVGVSVV 125
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS +EV V ++G EY + GK L V P +K GT + FWPD ++FT
Sbjct: 126 NALSSRVEVQVRKEGKEYFIGFDHGKTSEKLR-EVGP--TKRGNGTTVSFWPDPEIFTET 182
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKED-SDPEKNQYNEYF-FAGGLEEYVQWLNTDK 314
+D +T+A R RE+AFLN L I L E +D + E F +AGG+ ++V++LN K
Sbjct: 183 TVYDFDTLANRFREMAFLNKGLKIVLYDERVTDADGKPRTEVFQYAGGIVDFVKFLNEGK 242
Query: 315 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+ L+ + F + D T+++A+QW + +++++ +AN+I T +GGTH++G K ++TRT+
Sbjct: 243 ETLNKPIYFEAENDDGTVEVAMQWSTSYSTNSVMAFANNINTHEGGTHLDGFKQAVTRTI 302
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N + +K+KD +LSG+ REG I+SV++ +P+FEGQTKT+LGN E+R +V +V
Sbjct: 303 NEYARSKGILKEKDSNLSGDDTREGCAAIVSVKLHDPQFEGQTKTKLGNTEIRPLVQNAV 362
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
+ L EYLE +P I+ K+ ALKA AA++AR++ R+K VL S +LPGKLADCSS
Sbjct: 363 TQGLAEYLEENPTPAKRIIGKATQALKAREAARKAREMTRRKGVLDSFALPGKLADCSSK 422
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
TPE SE+FIVEGDSAGGSAKQ RDR+ Q I+ PL+ I A
Sbjct: 423 TPENSELFIVEGDSAGGSAKQARDRKTQAIL-PLRGKILNVERA 465
>gi|373457143|ref|ZP_09548910.1| DNA gyrase, B subunit [Caldithrix abyssi DSM 13497]
gi|371718807|gb|EHO40578.1| DNA gyrase, B subunit [Caldithrix abyssi DSM 13497]
Length = 636
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 247/467 (52%), Positives = 331/467 (70%), Gaps = 15/467 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y ++ IQVL+GLEAVRKRPAMYIG +GLHHLVYEI+DN++DEA AGYA+ I V
Sbjct: 3 AKEYTAKNIQVLKGLEAVRKRPAMYIGDVTSKGLHHLVYEIVDNSIDEAMAGYATEIMVT 62
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ D S+SV DNGRGIP+DLHP K A+E ++T LHAGGKF ++ Y VSGGLHGVG
Sbjct: 63 IHPDESISVEDNGRGIPVDLHPVEKKPAVEIIMTTLHAGGKFDKNT--YKVSGGLHGVGA 120
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE +V ++R+ Y Q Y RG PVT L + D++GT+I F D ++F
Sbjct: 121 SVVNALSEWCKVEIYRNNKIYQQVYERGAPVTELKI----IGETDKRGTKITFLADSEIF 176
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
I + +A R+RELAFLN L I + E +D ++ Y + GGL+E+V +L+
Sbjct: 177 K-KISYKFEVLANRLRELAFLNKNLKITIVDERNDIQET----YQYEGGLKEFVAYLDAS 231
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
+ PLH+ + F + DGI +++ALQ+ + AY++ +L Y N++ T++GGTH+ G K++LTR
Sbjct: 232 RTPLHEEPIYFEGERDGIPVEIALQYNT-AYTENILTYCNNVNTMEGGTHLSGFKSALTR 290
Query: 373 TLNSLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
T+NS +K +K+ D I+LSGE VREGLT +ISV+VP P+FEGQTKT+LGN EVR V+
Sbjct: 291 TINSYAQKYNFIKNNDKINLSGEDVREGLTAVISVKVPEPQFEGQTKTKLGNSEVRGAVE 350
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E L E+LE +P V I+ K +SA +A AA++AR+L R+K+VL SSSLPGKLADC
Sbjct: 351 TLVNEKLFEFLEQNPAVARPIIEKCISAARAREAARQARELTRRKTVLDSSSLPGKLADC 410
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SS P+ESE+++VEGDSAGGSAKQ RDRRFQ I+ PL+ I A
Sbjct: 411 SSNDPKESELYLVEGDSAGGSAKQARDRRFQAIL-PLKGKILNVEKA 456
>gi|19909557|dbj|BAB86974.1| DNA gyrase subunit B [Synechococcus elongatus PCC 6301]
Length = 545
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 250/424 (58%), Positives = 315/424 (74%), Gaps = 10/424 (2%)
Query: 114 ILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGG 173
++DNAVD+A AGY + I+V LL D S V DNGRGIP D+HP T KSALETVLT+LHAGG
Sbjct: 1 VVDNAVDKALAGYCNTIDVRLLKDGSCQVTDNGRGIPTDIHPQTGKSALETVLTILHAGG 60
Query: 174 KFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLP 233
KFGG S LHGVG+SVVNALSE +EVTVWR+G + Q++ +G P+ L V P
Sbjct: 61 KFGGGGYKVSGG--LHGVGVSVVNALSEYVEVTVWREGKTHQQRFEQGNPIGEL--QVAP 116
Query: 234 VDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQ 293
D+ DR+GT++RF PD +F+ +FD+ T+A R++ELA+LN + I E KN
Sbjct: 117 -DADDRRGTQVRFKPDATIFSETTEFDYGTLASRLKELAYLNAGVRIDFTDERLQLTKNH 175
Query: 294 ---YNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLG 349
Y+F GG+ EYV ++NTDK+ LH +++ + + DG+ ++ ALQWC DAYSD +LG
Sbjct: 176 EPHQETYYFEGGIREYVAYMNTDKQALHSEIIFVQSEKDGVQVEAALQWCVDAYSDNILG 235
Query: 350 YANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVP 409
+AN+IRTIDGGTHIEG+K LTRT+N++ +K KD D +LSGE++REGLT I+SV+VP
Sbjct: 236 FANNIRTIDGGTHIEGLKTVLTRTMNTIARKRNKRKDADNNLSGENIREGLTAIVSVKVP 295
Query: 410 NPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRA 469
+PEFEGQTKT+LGN EVR +VD V E LTEYLE HP V D IL K++ A AA AA+RA
Sbjct: 296 DPEFEGQTKTKLGNTEVRGIVDTLVGETLTEYLEFHPSVADLILEKAIQAFNAAEAARRA 355
Query: 470 RDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQ 529
R+LVR+KSVL SS+LPGKLADCSS P ESEIFIVEGDSAGGSAKQGRDRRFQ I+ PL+
Sbjct: 356 RELVRRKSVLESSTLPGKLADCSSRDPGESEIFIVEGDSAGGSAKQGRDRRFQAIL-PLR 414
Query: 530 ESIF 533
I
Sbjct: 415 GKIL 418
>gi|335039151|ref|ZP_08532333.1| DNA topoisomerase IV, B subunit [Caldalkalibacillus thermarum
TA2.A1]
gi|334180961|gb|EGL83544.1| DNA topoisomerase IV, B subunit [Caldalkalibacillus thermarum
TA2.A1]
Length = 637
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/463 (50%), Positives = 320/463 (69%), Gaps = 10/463 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
TY QIQVLEGLEAVRKRP MYIGST +GLHH+V+EI+DN+VDEA AG+ + I V +
Sbjct: 7 TYDENQIQVLEGLEAVRKRPGMYIGSTSSKGLHHMVWEIVDNSVDEALAGFCTEIHVTVH 66
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNSV+V+DNGRGIP+ +H + A+E ++TVLHAGGKFGG GY VSGGLHGVG SV
Sbjct: 67 EDNSVTVSDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFGGE--GYKVSGGLHGVGASV 124
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALSE LEV V RDG Y+Q+Y RG P L + R GT I F PD ++F
Sbjct: 125 VNALSEWLEVKVHRDGHIYYQRYRRGVPEFDLKV----IGQTARTGTTITFKPDPEIFEE 180
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
+FD+ T+ R+RE+AFLN L I + D E+ Q + + + GG+ +V+++N ++
Sbjct: 181 TTEFDYETLRNRLREIAFLNKGLKIIFK--DERMEQAQPDIFVYEGGIASFVEYINRARE 238
Query: 316 PLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LH+ + + +G+ +++ALQ+ +D+++ + +AN+I T +GGTH G K++LTR +N
Sbjct: 239 VLHEPIYIEDEKEGVYVEIALQY-NDSFASNLFSFANNIHTYEGGTHESGFKSALTRVIN 297
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
G+K +K+ D +L+G+ VREGLT +ISV++P+P+FEGQTKT+LGN EVR + +
Sbjct: 298 EYGRKQGLIKETDNNLTGDDVREGLTAVISVKIPDPQFEGQTKTKLGNSEVRGITENVFA 357
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
++ +L +P V IL K+L A +A AAK+AR+L R+K+ L SSLPGKLADCSS
Sbjct: 358 KHFFTFLNENPSVAKKILEKALMAQRAREAAKKARELTRRKNALEVSSLPGKLADCSSRD 417
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 418 PSISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKIINVEKA 459
>gi|268318257|ref|YP_003291976.1| DNA gyrase subunit B [Rhodothermus marinus DSM 4252]
gi|262335791|gb|ACY49588.1| DNA gyrase, B subunit [Rhodothermus marinus DSM 4252]
Length = 649
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/466 (50%), Positives = 323/466 (69%), Gaps = 7/466 (1%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ Y + IQ+LEGLEAVRKRPAMYIG G RGLHHLVYE++DNA+DEA AGY I V
Sbjct: 8 ASNYVASNIQILEGLEAVRKRPAMYIGDVGIRGLHHLVYEVVDNAIDEAMAGYCDRIAVT 67
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ D S++V DNGRGIP+D HP +SALE V+T LHAGGKF S+ Y VSGGLHGVG+
Sbjct: 68 INEDGSITVEDNGRGIPVDEHPTEKRSALEVVMTTLHAGGKFDKST--YKVSGGLHGVGV 125
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
S VNALS L TV RDG + Q Y+ GKP T+ V P+ + GT ++FWPD +F
Sbjct: 126 SCVNALSRKLIATVKRDGYVWRQTYAYGKP-TSPVERVRPMREDEETGTIVQFWPDPTIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T ++F +T+A R+RELA+LN + I++ + E +Y EY+F GGL E+VQ+L+
Sbjct: 185 KT-VEFRFDTLAERLRELAYLNRGVRISIEDRREEDESLRYEEYYFEGGLVEFVQYLDET 243
Query: 314 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
+ P+HD V+ + D + +++AL++ +D Y++ +L + N+I T +GGTH+ G + +LTR
Sbjct: 244 RTPIHDEVIYIAGEADDVVVEVALRY-NDGYAENVLSFVNNINTHEGGTHVAGFRTALTR 302
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
TL + +K+ +K+ LSGE REGLT +ISV+VP P+FEGQTKT+LGN EV+ +V
Sbjct: 303 TLKAYAEKNNLLKNFKGELSGEDFREGLTAVISVKVPEPQFEGQTKTKLGNSEVQGIVAG 362
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
V E+L+ +LE HP IL K + A +A +AA++AR+LV++K+ L SSLPGKLADC+
Sbjct: 363 IVSEHLSRWLEDHPREARRILDKVILAAQARVAARKARELVQRKNALNGSSLPGKLADCA 422
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P + E+F+VEGDSAGGSAKQ R+R FQ I+ PL+ I A
Sbjct: 423 SRDPSKCELFLVEGDSAGGSAKQARNREFQAIL-PLRGKILNVEKA 467
>gi|312126267|ref|YP_003991141.1| DNA gyrase subunit B [Caldicellulosiruptor hydrothermalis 108]
gi|311776286|gb|ADQ05772.1| DNA gyrase, B subunit [Caldicellulosiruptor hydrothermalis 108]
Length = 637
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 244/460 (53%), Positives = 323/460 (70%), Gaps = 20/460 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S+ Y + +IQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DNA+DEA AG+ NIEV
Sbjct: 8 SQQYSASEIQVLEGLEAVRKRPGMYIGSTSQRGLHHLVYEIVDNAIDEAMAGFCKNIEVV 67
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNSV+V D+GRGIP+D+HP KS +E V TVLHAGGKF + Y VSGGLHGVG
Sbjct: 68 IHKDNSVTVIDDGRGIPVDIHPKLQKSGVEVVFTVLHAGGKF--NERVYKVSGGLHGVGA 125
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS LEV V+RDG Y+Q+Y RGKP TC + + + DR GT++ F PD ++F
Sbjct: 126 SVVNALSRYLEVEVYRDGKVYYQRYERGKP----TCELKVIGTTDRTGTKVTFLPDDEIF 181
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWL 310
T I+FD + I R+RELAFLN + I R+++ P + +YN GG+ E+V++L
Sbjct: 182 ET-IEFDGDVILQRLRELAFLNKGIRIVFVDEREKNVKPIELKYN-----GGIAEFVKFL 235
Query: 311 NTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
N +K+ LH + + + + I I++A+Q+ D + + + +AN+I TIDGGTH+ G K +
Sbjct: 236 NRNKEVLHQEPIYIEGEKNDILIEVAVQYTED-FGENIYSFANNIATIDGGTHLIGFKTA 294
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
+T+ +N KK +K D L GE +R+G+T I+SV++ P+FEGQTKT+LGN E R
Sbjct: 295 VTKAVNEYAKKYNFIKG-DTQLLGEDIRDGMTAIVSVKIHEPQFEGQTKTKLGNSEARWA 353
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLV-RQKSVLRSSSLPGKL 488
V+ V E L +LE +PDV I+ K++ A KA AK+AR+LV ++KS L SS+LPGKL
Sbjct: 354 VENLVSEKLAAFLEENPDVSKKIIDKAILAAKAREEAKKARELVIKRKSALDSSNLPGKL 413
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPL 528
ADCS P + EIFIVEGDSAGGSAKQGRDRR+Q I+ PL
Sbjct: 414 ADCSEKDPAKCEIFIVEGDSAGGSAKQGRDRRYQAIL-PL 452
>gi|312878944|ref|ZP_07738744.1| DNA gyrase subunit B [Aminomonas paucivorans DSM 12260]
gi|310782235|gb|EFQ22633.1| DNA gyrase subunit B [Aminomonas paucivorans DSM 12260]
Length = 635
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/470 (50%), Positives = 324/470 (68%), Gaps = 13/470 (2%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E P S+ Y ++ IQVLEGLEAVRKRP MYIG GPRGLHHLVYE++DNA+DEA AG
Sbjct: 2 EAPASQ-YTAKDIQVLEGLEAVRKRPGMYIGDQGPRGLHHLVYEVVDNAIDEAMAGVCDT 60
Query: 130 IEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 189
+ V + + SVSV DNGRGIP ++H AT KSA E VLTVLHAG KF Y VSGGLH
Sbjct: 61 VYVTIHPEGSVSVVDNGRGIPTEIHAATGKSAAEVVLTVLHAGAKF--DKKAYQVSGGLH 118
Query: 190 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 249
GVG+SVVNALSE LEVT+WR+G E+ Q++ RG VT L + DR+GT+++F PD
Sbjct: 119 GVGVSVVNALSEWLEVTIWRNGREHRQRFERGAAVTELQTG----EDTDRRGTKVQFMPD 174
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 309
+++F+T + F T+ GR+RELAFLNP +TI + DP ++ Y F GG+ + ++
Sbjct: 175 EEIFST-LDFSSETLLGRLRELAFLNPGITIHFQDLRQDPILEKH--YHFEGGIASFAEY 231
Query: 310 LNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
LN K+ L V R + D + +D+ALQ+ +D Y + + +AN I T++GGTH+ G +
Sbjct: 232 LNRGKEVLFKPPVVVRGEKDNVVVDVALQY-NDTYLERVFAFANLINTVEGGTHVSGFRT 290
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
+LTR +N +K K +KDKD + +G+ ++EGLT ++SV++ P+FEGQTKT+LGN +V+
Sbjct: 291 ALTRAVNDQARKEKILKDKDPNFTGDDLKEGLTAVVSVKLLEPQFEGQTKTKLGNGDVKG 350
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+VD V E L LE D+L ++ K++ A +A AAK+ARDLVR+KS + LPGKL
Sbjct: 351 IVDSVVYEGLKALLEERADILKPVVDKAVRARQAREAAKKARDLVRRKSAMSGLDLPGKL 410
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
ADCS+ PEE E++IVEG+SAGGSAK GR+R FQ I+ PL+ I A
Sbjct: 411 ADCSNRNPEECEVYIVEGESAGGSAKMGRNRSFQAIL-PLRGKILNVERA 459
>gi|312621133|ref|YP_004022746.1| DNA gyrase subunit B [Caldicellulosiruptor kronotskyensis 2002]
gi|312201600|gb|ADQ44927.1| DNA gyrase, B subunit [Caldicellulosiruptor kronotskyensis 2002]
Length = 650
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/463 (52%), Positives = 324/463 (69%), Gaps = 20/463 (4%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
N S+ Y + +IQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DNA+DEA AG+ NI
Sbjct: 18 NTNSQQYSASEIQVLEGLEAVRKRPGMYIGSTSQRGLHHLVYEIVDNAIDEAMAGFCKNI 77
Query: 131 EVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 190
EV + DNSV+V D+GRGIP+D+HP KS +E V TVLHAGGKF + Y VSGGLHG
Sbjct: 78 EVVIHKDNSVTVIDDGRGIPVDIHPKLQKSGVEVVFTVLHAGGKF--NERVYKVSGGLHG 135
Query: 191 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 250
VG SVVNALS LEV V+RDG Y+Q+Y RGKP TC + + + DR GT++ F PD
Sbjct: 136 VGASVVNALSRYLEVEVYRDGKVYYQRYERGKP----TCELKVIGTTDRTGTKVTFLPDD 191
Query: 251 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYV 307
++F T I+FD + I R+RELAFLN + I R+++ P + +Y+ GG+ E+V
Sbjct: 192 EIFET-IEFDGDVILQRLRELAFLNKGIRIVFVDEREKNVKPVELKYD-----GGIAEFV 245
Query: 308 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 366
++LN +K+ LH + + + + I I++A+Q+ D + + + +AN+I TIDGGTH+ G
Sbjct: 246 KFLNRNKEVLHQEPIYIEGEKNDILIEIAIQYTED-FGENIYSFANNIATIDGGTHLIGF 304
Query: 367 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 426
K ++T+ +N KK +K D L GE +R+G+T I+SV++ P+FEGQTKT+LGN E
Sbjct: 305 KTAVTKAVNEYAKKYNFIKG-DTQLLGEDIRDGMTAIVSVKIHEPQFEGQTKTKLGNSEA 363
Query: 427 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLV-RQKSVLRSSSLP 485
R V+ V E L +LE +PD+ I+ K++ A KA AK+AR+LV ++KS L SS+LP
Sbjct: 364 RWAVENLVSERLAAFLEENPDISKKIIDKAILAAKAREEAKKARELVIKRKSALDSSNLP 423
Query: 486 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPL 528
GKLADCS P + EIFIVEGDSAGGSAKQGRDRR+Q I+ PL
Sbjct: 424 GKLADCSEKDPAKCEIFIVEGDSAGGSAKQGRDRRYQAIL-PL 465
>gi|114565581|ref|YP_752735.1| DNA topoisomerase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114336516|gb|ABI67364.1| DNA gyrase subunit B [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 633
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/467 (50%), Positives = 326/467 (69%), Gaps = 12/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + Y + IQVLEGLEAVRKRP MYIGSTGP+GLHHLV+EI+DN++DEA AG+ IEV
Sbjct: 2 LEREYNASDIQVLEGLEAVRKRPGMYIGSTGPKGLHHLVFEIVDNSIDEAVAGFCKKIEV 61
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V D+GRGIP+D+HPA AL+ +LT LH+GGKFGGS GY++SGGLHGVG
Sbjct: 62 TINQDNSITVCDDGRGIPVDIHPAMGIPALQVILTTLHSGGKFGGS--GYNISGGLHGVG 119
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
LSVVNALS +EV V RDG Y Q Y RG PV + + GT I F+ D ++
Sbjct: 120 LSVVNALSRRMEVRVKRDGHIYQQDYERGNPVNEIRI----IGESKETGTSICFFADDEI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F I F+ + R+REL+FLN L I+LR D E+ Y E+ ++ GL+++V ++N
Sbjct: 176 FEE-INFEREILLQRLRELSFLNRNLKISLR--DEREEEVFYQEFHYSHGLKDFVAYINK 232
Query: 313 DKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K+ ++D + F D + + +A+Q+ +++YS+ + +AN+IRT +GGTH G K +LT
Sbjct: 233 NKEVINDNPIYFENKKDDVIVQVAIQY-NNSYSENLYSFANNIRTQEGGTHEIGFKNALT 291
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R +N KK+ +K+ D +LSGE +REG+ IISV V +P+FEGQTKT+LGN +R +V+
Sbjct: 292 RVINDYAKKNNILKENDNNLSGEDIREGIAAIISVLVKDPQFEGQTKTKLGNTYIRGIVE 351
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E++ +YL +P +L K++SA +A AAK+AR+L R+K+ L S++LPGKLADC
Sbjct: 352 SIVFEHVEDYLNENPAAARKLLDKAISARRAREAAKKARELTRRKNALESTALPGKLADC 411
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S+ P ESE+FIVEGDSAGGSAKQGRDR +Q I+ PL+ I A
Sbjct: 412 SNKNPAESELFIVEGDSAGGSAKQGRDRTYQAIL-PLRGKILNVEKA 457
>gi|206900988|ref|YP_002251257.1| DNA gyrase, B subunit [Dictyoglomus thermophilum H-6-12]
gi|206740091|gb|ACI19149.1| DNA gyrase, B subunit [Dictyoglomus thermophilum H-6-12]
Length = 635
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 241/462 (52%), Positives = 329/462 (71%), Gaps = 14/462 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ IQ+LEG EAVR+RP MYIG TG RGLHHL++E++DN++DE AGY I V L
Sbjct: 9 YTADSIQILEGTEAVRRRPGMYIGDTGVRGLHHLIFELVDNSIDEVMAGYCDYILVELKK 68
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D +V VADNGRGIP+D+HP K ALE VLT LHAGGKF S+S Y +SGGLHGVGLSVV
Sbjct: 69 DGAVVVADNGRGIPVDIHPQAKKPALEVVLTTLHAGGKF--SNSIYKISGGLHGVGLSVV 126
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS LEV V RDG ++Q Y RGKP+T LT D+ GT+I+F+PD ++F T
Sbjct: 127 NALSSKLEVEVMRDGKIFYQVYERGKPITPLTVK----GETDKTGTKIKFYPDPEIFETT 182
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+FD++ +A R+RELAFLNPK+TI LR E + + N + + GGL E++++L+ K+
Sbjct: 183 -KFDYDIVANRLRELAFLNPKVTIELRDERT----GRSNIFKYEGGLLEFIEYLSKGKEV 237
Query: 317 LHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNS 376
LH+ + ++ + +++ +Q+ S Y + +L Y N+I TI+GGTH+ G + +LTR +N+
Sbjct: 238 LHEPIYMEREEGNLILEIVMQYNS-GYDELILSYVNNIHTIEGGTHVTGFRTALTRVVNN 296
Query: 377 LGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQE 436
+ K+ + SLSG+ VREGLT I+SV+VP+P+FEGQTKT+LGN EVRK V++ V+E
Sbjct: 297 FARSWGLWKENE-SLSGDDVREGLTAIVSVKVPDPQFEGQTKTKLGNTEVRKFVEKVVEE 355
Query: 437 YLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTP 496
LTEY +PD I++K + A +A AA++AR+LVR+KS+L S+ LPGKLADCS P
Sbjct: 356 ELTEYFSKNPDTGKLIITKIIEAYRARQAARKARELVRRKSLLESTLLPGKLADCSEKDP 415
Query: 497 EESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
+ E+FIVEG+SAGGSAKQ RDRR+Q I+ PL+ I A
Sbjct: 416 AKCELFIVEGESAGGSAKQARDRRYQAIL-PLRGKILNVEKA 456
>gi|308801547|ref|XP_003078087.1| putative DNA gyrase B subunit (ISS) [Ostreococcus tauri]
gi|116056538|emb|CAL52827.1| putative DNA gyrase B subunit (ISS) [Ostreococcus tauri]
Length = 684
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 246/461 (53%), Positives = 333/461 (72%), Gaps = 19/461 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S Y + IQVL+GLE VRKRP MYIGST +GLHHLV+E+LDN+VDE QAG+AS+++V
Sbjct: 57 SGEYDAGSIQVLQGLEPVRKRPGMYIGSTSTKGLHHLVWEVLDNSVDEVQAGHASHVQVT 116
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ D V+V D+GRGIP D+HP T KS+LETVLT+LHAGGKFGG SSGY VSGGLHGVG+
Sbjct: 117 VDDDGFVTVMDDGRGIPTDVHPVTGKSSLETVLTILHAGGKFGGDSSGYHVSGGLHGVGI 176
Query: 194 SVVNALSESLEVTVWRDG-MEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
SVVNALSE +EVTV G M+ Q+ G +++GT +RF PD Q+
Sbjct: 177 SVVNALSELVEVTVHATGNMKEKQQDGSG----------------NKKGTMVRFKPDDQI 220
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F ++FD+N I R++ELAFLN + L+ ++ + + +A GL++YV L
Sbjct: 221 FD-KVKFDNNIIRTRMKELAFLNKGTELHLKTFNTKTKSYVEEKLVYAEGLKDYVLDLTA 279
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
D LH+ + F +++GI ++ +L W +D+YSDT+LGYANSIRTIDGGTHI+G+K SLT+
Sbjct: 280 DATRLHEPITFSGEMEGIRVEGSLCWTADSYSDTLLGYANSIRTIDGGTHIDGLKYSLTK 339
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
T+N+ +K+K +KD D +L G+HVREGL+ +I+V VP PEFEGQTKTRLGN EVR++V+
Sbjct: 340 TINNASRKAKLLKDADSNLGGDHVREGLSGVIAVWVPEPEFEGQTKTRLGNSEVRRIVEN 399
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ + + E + L ++ +K+ SA KAA AAKRAR+LVR+K+VL ++ LPGKL+DCS
Sbjct: 400 IASDAVMGHFEFNSADLKAVFAKAQSAFKAAEAAKRARELVRRKTVLTANRLPGKLSDCS 459
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
S+ + +EIF+VEGDSAGGS KQGRDR FQ ++ PL+ I
Sbjct: 460 SSDADRTEIFLVEGDSAGGSCKQGRDRSFQAVL-PLRGKIM 499
>gi|222528063|ref|YP_002571945.1| DNA gyrase subunit B [Caldicellulosiruptor bescii DSM 6725]
gi|222454910|gb|ACM59172.1| DNA gyrase, B subunit [Caldicellulosiruptor bescii DSM 6725]
Length = 650
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 244/463 (52%), Positives = 324/463 (69%), Gaps = 20/463 (4%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
N S+ Y + +IQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DNA+DEA AG+ NI
Sbjct: 18 NTNSQQYSASEIQVLEGLEAVRKRPGMYIGSTSQRGLHHLVYEIVDNAIDEAMAGFCKNI 77
Query: 131 EVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 190
EV + DNSV+V D+GRGIP+D+HP KS +E V TVLHAGGKF + Y VSGGLHG
Sbjct: 78 EVVIHKDNSVTVIDDGRGIPVDIHPKLQKSGVEVVFTVLHAGGKF--NERVYKVSGGLHG 135
Query: 191 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 250
VG SVVNALS LEV V+RDG Y+Q+Y RGKP TC + + + DR GT++ F PD
Sbjct: 136 VGASVVNALSRYLEVEVYRDGKVYYQRYERGKP----TCELKVIGTTDRTGTKVTFLPDD 191
Query: 251 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYV 307
++F T I+FD + I R+RELAFLN + I R+++ P + +Y+ GG+ E+V
Sbjct: 192 EIFET-IEFDGDVILQRLRELAFLNKGIRIVFVDEREKNVKPVELKYD-----GGIAEFV 245
Query: 308 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 366
++LN +K+ LH + + + + I I++A+Q+ D + + + +AN+I TIDGGTH+ G
Sbjct: 246 KFLNRNKEVLHQEPIYIEGEKNDILIEVAVQYTED-FGENIYSFANNIATIDGGTHLIGF 304
Query: 367 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 426
K ++T+ +N KK +K D L GE +R+G+T I+SV++ P+FEGQTKT+LGN E
Sbjct: 305 KTAVTKAVNEYAKKYNFIKG-DTQLLGEDIRDGMTAIVSVKIHEPQFEGQTKTKLGNSEA 363
Query: 427 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLV-RQKSVLRSSSLP 485
R V+ V E L +LE +PDV I+ K++ A KA AK+AR+LV ++KS L SS+LP
Sbjct: 364 RWAVENLVSERLAAFLEENPDVSKKIIDKAILAAKAREEAKKARELVIKRKSALDSSNLP 423
Query: 486 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPL 528
GKLADCS P + EIFIVEGDSAGGSAKQGRDRR+Q I+ PL
Sbjct: 424 GKLADCSEKDPAKCEIFIVEGDSAGGSAKQGRDRRYQAIL-PL 465
>gi|345304552|ref|YP_004826454.1| DNA gyrase subunit B [Rhodothermus marinus SG0.5JP17-172]
gi|345113785|gb|AEN74617.1| DNA gyrase, B subunit [Rhodothermus marinus SG0.5JP17-172]
Length = 649
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/466 (50%), Positives = 323/466 (69%), Gaps = 7/466 (1%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ Y + IQ+LEGLEAVRKRPAMYIG G RGLHHLVYE++DNA+DEA AGY I V
Sbjct: 8 ASNYVASNIQILEGLEAVRKRPAMYIGDVGIRGLHHLVYEVVDNAIDEAMAGYCDRIAVT 67
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ D S++V DNGRGIP+D HP +SALE V+T LHAGGKF ++ Y VSGGLHGVG+
Sbjct: 68 INEDGSITVEDNGRGIPVDEHPTEKRSALEVVMTTLHAGGKFDKNT--YKVSGGLHGVGV 125
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
S VNALS L TV RDG + Q Y+ GKP T+ V P+ + GT ++FWPD +F
Sbjct: 126 SCVNALSRKLIATVKRDGYVWRQTYAYGKP-TSPVERVRPMREDEETGTIVQFWPDPTIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T ++F +T+A R+RELA+LN + I++ + E +Y EY+F GGL E+VQ+L+
Sbjct: 185 KT-VEFRFDTLAERLRELAYLNRGVRISIEDRREEDESLRYEEYYFEGGLVEFVQYLDET 243
Query: 314 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
+ P+HD V+ + D + +++AL++ +D Y++ +L + N+I T +GGTH+ G + +LTR
Sbjct: 244 RTPIHDEVIYIAGEADDVVVEVALRY-NDGYAENVLSFVNNINTHEGGTHVAGFRTALTR 302
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
TL + +K+ +K+ LSGE REGLT +ISV+VP P+FEGQTKT+LGN EV+ +V
Sbjct: 303 TLKAYAEKNNLLKNFKGELSGEDFREGLTAVISVKVPEPQFEGQTKTKLGNSEVQGIVAG 362
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
V E+L+ +LE HP IL K + A +A +AA++AR+LV++K+ L SSLPGKLADC+
Sbjct: 363 IVSEHLSRWLEDHPREARRILDKVILAAQARVAARKARELVQRKNALNGSSLPGKLADCA 422
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P + E+F+VEGDSAGGSAKQ R+R FQ I+ PL+ I A
Sbjct: 423 SRDPSKCELFLVEGDSAGGSAKQARNREFQAIL-PLRGKILNVEKA 467
>gi|295106380|emb|CBL03923.1| DNA gyrase subunit B [Gordonibacter pamelaeae 7-10-1-b]
Length = 656
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 242/472 (51%), Positives = 322/472 (68%), Gaps = 18/472 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y IQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DNAVDEA AGY IEV +
Sbjct: 10 YDGSDIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNAVDEALAGYCDTIEVWIHP 69
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNS++V DNGRGIP+D HP +E VLT+LHAGGKFGG GY VSGGLHGVG+SVV
Sbjct: 70 DNSITVDDNGRGIPVDKHPKEKIPTVEVVLTILHAGGKFGGE--GYKVSGGLHGVGVSVV 127
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQG--TRIRFWPDKQVFT 254
NALS +EV+V+++G++Y + GK T L K R+G T + FWPD +FT
Sbjct: 128 NALSSRVEVSVFKEGVQYDISFDHGK-----TAEKLREVGKVRRGNGTTVTFWPDPTIFT 182
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDP-------EKNQYNEYF-FAGGLEEY 306
+D++T+A R RE+AFLN L I L E +P E F +AGG+ ++
Sbjct: 183 DTTVYDYDTLASRFREMAFLNKGLKIILHDERVNPGSTLSDLAPEPRTEVFQYAGGIVDF 242
Query: 307 VQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 366
V++LN K+ L+ + F + D T+++A+QW S +++++ +AN+I T +GGTH++G
Sbjct: 243 VKFLNEGKETLNKPIYFEAENDDGTVEVAMQWSSSYSTNSVMAFANNINTHEGGTHLDGF 302
Query: 367 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 426
K ++TRT+N + +K+KD +LSG+ REG IISV++ +P+FEGQTKT+LGN E+
Sbjct: 303 KQAVTRTINEYARAKGILKEKDSNLSGDDTREGCAAIISVKLHDPQFEGQTKTKLGNTEI 362
Query: 427 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 486
R +V +V + L EYLE +P I+ K+ ALKA AA++AR++ R+K VL S +LPG
Sbjct: 363 RPLVQNAVTQGLAEYLEENPKPAKRIIDKATQALKAREAARKAREMTRRKGVLDSFALPG 422
Query: 487 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
KLADCSS TP +SEIFIVEGDSAGGSAKQ RDR+ Q I+ PL+ I A
Sbjct: 423 KLADCSSKTPADSEIFIVEGDSAGGSAKQARDRKTQAIL-PLRGKILNVERA 473
>gi|339443689|ref|YP_004709693.1| hypothetical protein EGYY_00050 [Eggerthella sp. YY7918]
gi|338903441|dbj|BAK43292.1| hypothetical protein EGYY_00050 [Eggerthella sp. YY7918]
Length = 647
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/464 (51%), Positives = 317/464 (68%), Gaps = 9/464 (1%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y IQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AGY I V +
Sbjct: 8 YDGSDIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGYCDQIGVWIHP 67
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNS++V DNGRGIPID HP +E VLT+LHAGGKFGG GY VSGGLHGVG+SVV
Sbjct: 68 DNSITVTDNGRGIPIDKHPKEKIPTVEVVLTILHAGGKFGGE--GYKVSGGLHGVGVSVV 125
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS +EV V RDG EY + GK LT + GT+ FWPD ++FT
Sbjct: 126 NALSSRVEVFVKRDGSEYKITFDHGKTKEKLT----KIGPAKGTGTKTTFWPDPEIFTET 181
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKED-SDPEKNQYNEYF-FAGGLEEYVQWLNTDK 314
+D++T+A R RE+AFLN L I L +D E E F +AGG+ ++V++LN K
Sbjct: 182 TVYDYDTLANRFREMAFLNKGLKITLHDARVTDEEGKPRTEVFQYAGGIVDFVKFLNEGK 241
Query: 315 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+ L+ + F + T+++A+QW + +++++ +AN+I T +GGTH++G K ++TR++
Sbjct: 242 ETLNKPIYFEAENADGTVEVAMQWSTSYSTNSVMAFANNINTHEGGTHLDGFKQAVTRSI 301
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N + +K+KD +LSG+ REGL I+SV++ +P+FEGQTKT+LGN E+R +V +V
Sbjct: 302 NEYARAKGILKEKDSNLSGDDTREGLAAIVSVKLHDPQFEGQTKTKLGNTEIRPLVQNAV 361
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
+ L+EYLE +P I+ K+ ALKA AA++AR++ R+K VL S +LPGKLADCSS
Sbjct: 362 TQGLSEYLEENPSPAKRIIGKATQALKAREAARKAREMTRRKGVLDSFALPGKLADCSSK 421
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PE SEIFIVEGDSAGGSAKQ RDR+ Q I+ PL+ I A
Sbjct: 422 EPENSEIFIVEGDSAGGSAKQARDRKTQAIL-PLRGKILNVERA 464
>gi|374992786|ref|YP_004968285.1| DNA gyrase subunit B [Desulfosporosinus orientis DSM 765]
gi|357211152|gb|AET65770.1| DNA gyrase, B subunit [Desulfosporosinus orientis DSM 765]
Length = 644
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 241/474 (50%), Positives = 331/474 (69%), Gaps = 13/474 (2%)
Query: 66 EAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAG 125
E +N + Y + QI+VLEGLEAVRKRP MYIGSTGPRGLHHLVYEI+DN++DEA AG
Sbjct: 6 EQLAKNAID-NYNAGQIEVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEIVDNSIDEALAG 64
Query: 126 YASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVS 185
+ + I+V + DNS++V DNGRGIP+D+HP K A+E LTVLHAGGKFGGS S Y VS
Sbjct: 65 FCNKIDVTIHLDNSITVLDNGRGIPVDIHPKIGKPAVEVALTVLHAGGKFGGSESAYKVS 124
Query: 186 GGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIR 245
GGLHGVGLSVVNALSE L V V + G Y Q+Y++GKP T L + + + GT+I
Sbjct: 125 GGLHGVGLSVVNALSEWLIVEVSKGGHIYRQEYAKGKPTTEL----MNIGTTKTNGTKIT 180
Query: 246 FWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEE 305
F PD ++F + +D + +A R+REL+FLN +TI L+ E + E+ + AGG+++
Sbjct: 181 FLPDSEIFEIKV-YDFDILAHRLRELSFLNKNITIILKDERTSVEET----FVHAGGIQD 235
Query: 306 YVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 364
+V +LN K LH + D + +++ +Q+ +D+Y++ + YAN+I T +GGTH
Sbjct: 236 FVLYLNNSKDCLHSQPIYIETTKDNVQVEVCIQY-NDSYTENLFSYANNINTQEGGTHEA 294
Query: 365 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 424
G K++LTR +N +K+ +K D +LSG+ +REGLT +ISV+VP+P+FEGQTKT+LGN
Sbjct: 295 GFKSALTRVINDYARKNNMLKPTDSNLSGDDIREGLTAVISVKVPDPQFEGQTKTKLGNS 354
Query: 425 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 484
E+R +VD + E L+ +LE +P + + KS+ A +A AA++AR+L R+KS L +SL
Sbjct: 355 EIRGIVDSATGEGLSIFLEENPAIARKFIEKSVQAARARDAARKARELTRRKSALEGTSL 414
Query: 485 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PGKLADCS P+ E++IVEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 415 PGKLADCSWKEPDLCEMYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNVEKA 467
>gi|312792288|ref|YP_004025211.1| DNA gyrase subunit B [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312179428|gb|ADQ39598.1| DNA gyrase, B subunit [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 637
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/463 (52%), Positives = 324/463 (69%), Gaps = 20/463 (4%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
N S+ Y + +IQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DNA+DEA AG+ NI
Sbjct: 5 NTNSQEYSASEIQVLEGLEAVRKRPGMYIGSTSQRGLHHLVYEIVDNAIDEAMAGFCKNI 64
Query: 131 EVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 190
EV + DNSV+V D+GRGIP+D+HP KS +E V TVLHAGGKF + Y VSGGLHG
Sbjct: 65 EVVIHKDNSVTVIDDGRGIPVDIHPKLQKSGVEVVFTVLHAGGKF--NERVYKVSGGLHG 122
Query: 191 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 250
VG SVVNALS LEV V+RDG Y+Q+Y RGKP TC + + +R GT++ F PD
Sbjct: 123 VGASVVNALSRYLEVEVYRDGKVYYQRYERGKP----TCELKVIGETNRTGTKVTFLPDD 178
Query: 251 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYV 307
++F T I+FD + I R+RELAFLN + I R++++ P + +Y+ GG+ E+V
Sbjct: 179 EIFET-IEFDGDVILQRLRELAFLNKGIRIVFVDEREKNAKPIELKYD-----GGIAEFV 232
Query: 308 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 366
++LN +K+ LH + + + + I I++A+Q+ D + + + +AN+I TIDGGTH+ G
Sbjct: 233 KFLNRNKEVLHQEPIYIEGEKNDILIEVAVQYTED-FGENIYSFANNIATIDGGTHLIGF 291
Query: 367 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 426
K ++T+ +N KK +K D L GE +R+G+T I+SV++ P+FEGQTKT+LGN E
Sbjct: 292 KTAVTKAVNEYAKKYNFIKG-DTQLLGEDIRDGMTAIVSVKIHEPQFEGQTKTKLGNSEA 350
Query: 427 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLV-RQKSVLRSSSLP 485
R V+ V E L +LE +PDV I+ K++ A KA AK+AR+LV ++KS L SS+LP
Sbjct: 351 RWAVENLVSEKLAAFLEENPDVSKKIIDKAILAAKAREEAKKARELVIKRKSALDSSNLP 410
Query: 486 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPL 528
GKLADCS P + EIFIVEGDSAGGSAKQGRDRR+Q I+ PL
Sbjct: 411 GKLADCSEKDPAKCEIFIVEGDSAGGSAKQGRDRRYQAIL-PL 452
>gi|392423465|ref|YP_006464459.1| DNA gyrase subunit B [Desulfosporosinus acidiphilus SJ4]
gi|391353428|gb|AFM39127.1| DNA gyrase subunit B [Desulfosporosinus acidiphilus SJ4]
Length = 644
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 240/464 (51%), Positives = 327/464 (70%), Gaps = 12/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y + QI+VLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AG I+V +
Sbjct: 15 SYNAGQIEVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSIDEALAGVCDQIDVYIH 74
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+D+HP K +E LTVLHAGGKFGGS S Y VSGGLHGVGLSV
Sbjct: 75 NDNSITVIDNGRGIPVDIHPKMGKPTVEVCLTVLHAGGKFGGSESAYKVSGGLHGVGLSV 134
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS L V V + G YHQ+Y++GKP T L L + + + GT+I F PD ++F
Sbjct: 135 VNALSNWLIVEVSKGGHIYHQEYAKGKPTTDL----LDIGTTEGTGTKITFMPDPEIFED 190
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
+ +D++ +A R+REL+FLN + I L+ E SD ++ +F GG++++V +LN K
Sbjct: 191 TV-YDYDILAHRLRELSFLNKSVKINLKDERSDIQET----FFHTGGIQDFVLYLNKTKD 245
Query: 316 PLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
LH + + DG+ +++ +Q+ +D+Y++ + YAN+I T +GGTH G K++LTR +
Sbjct: 246 CLHPQPIFIETNKDGVQVEVCMQY-NDSYTENLYSYANNINTQEGGTHEAGFKSALTRVI 304
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +K+ +K D +LSG+ +REGLT ++SV+VP+P+FEGQTKT+LGN E+R +VD S
Sbjct: 305 NDYARKNNILKSSDSNLSGDDIREGLTAVVSVKVPDPQFEGQTKTKLGNSEIRGIVDSST 364
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E L+ +LE +P V + KSL A +A AA++AR+L R+KS L +SLPGKLADCS
Sbjct: 365 GEGLSTFLEENPTVTRKFIEKSLQAARARDAARKARELTRRKSALEGTSLPGKLADCSWK 424
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P+ E++IVEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 425 EPDLCEMYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNVEKA 467
>gi|424780808|ref|ZP_18207678.1| DNA gyrase subunit B [Catellicoccus marimammalium M35/04/3]
gi|422842733|gb|EKU27182.1| DNA gyrase subunit B [Catellicoccus marimammalium M35/04/3]
Length = 646
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 239/466 (51%), Positives = 322/466 (69%), Gaps = 11/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AG+A+ I+V
Sbjct: 10 AQNYDASQIQVLEGLEAVRKRPGMYIGSTSEQGLHHLVWEIVDNSIDEALAGFATKIDVI 69
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++V DNGRGIP+D+ T + A+ETV TVLHAGGKFGG S Y VSGGLHGVG
Sbjct: 70 IEEDNSITVIDNGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGS--YKVSGGLHGVGS 127
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS SL+V V+++G Y Q+Y RG+ V L + DR+GT + F PD +F
Sbjct: 128 SVVNALSTSLDVKVYKNGHIYFQEYKRGQVVDDLKI----IGDTDRRGTEVHFVPDPTIF 183
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
F+ +T+A R+RELAFLN L I + ED + Q EY + GG+ YV++LN +
Sbjct: 184 KETTVFNFDTLATRVRELAFLNRGLKITI--EDKRKGQEQQREYHYEGGICSYVEFLNDE 241
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + + + + ITI++A+Q+ S Y +L +AN+I T +GG H G K++LTR
Sbjct: 242 KEVLFEPPIYCEGEQNNITIEVAMQYTS-GYQSKILSFANNIHTYEGGMHESGFKSALTR 300
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N+ ++ K +K+ D L GE VREGLT +IS++ P P+FEGQTKT+LGN EVR V D+
Sbjct: 301 VINNYARRQKMIKENDDKLMGEDVREGLTAVISIKHPEPQFEGQTKTKLGNSEVRSVTDR 360
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E ++L +P+V ++ K+L A KA LAAKRAR+ R+K+ L S+LPGKLADCS
Sbjct: 361 LFAEAFDKFLMENPNVAKKVVEKALLATKARLAAKRAREATRKKNELEISNLPGKLADCS 420
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S E+ E+FIVEGDSAGGSAKQGRDR +Q I+ P++ I A
Sbjct: 421 SREAEKCELFIVEGDSAGGSAKQGRDRNYQAIL-PIRGKILNVEKA 465
>gi|346722695|ref|YP_001178861.2| DNA gyrase subunit B [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|345106666|gb|ABP65670.2| DNA gyrase, B subunit [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 639
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 247/465 (53%), Positives = 327/465 (70%), Gaps = 17/465 (3%)
Query: 67 AFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGY 126
A +NP ++ Y + +IQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DNA+DEA AG+
Sbjct: 4 ATTKNP-NQEYTASEIQVLEGLEAVRKRPGMYIGSTSQRGLHHLVYEIVDNAIDEAMAGF 62
Query: 127 ASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSG 186
NI+V + DNSV+V D+GRGIP+D+HP KS +E V TVLHAGGKF + S Y VSG
Sbjct: 63 CKNIDVIIHRDNSVTVLDDGRGIPVDIHPKLQKSGVEVVFTVLHAGGKF--NESVYKVSG 120
Query: 187 GLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRF 246
GLHGVG SVVNALS LEV V+RDG Y+QKY RGKPV C + + R GT++ F
Sbjct: 121 GLHGVGASVVNALSRYLEVEVYRDGKVYYQKYERGKPV----CDLKVIGQTQRTGTKVTF 176
Query: 247 WPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKN-QYNEYFFAGGLEE 305
PD ++F T I+FD + + R+RELAFLN + I E EKN + E + GG+ E
Sbjct: 177 LPDDEIFET-IEFDADVLLQRLRELAFLNKGIRITFTDE---REKNPKTIELKYDGGIAE 232
Query: 306 YVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 364
+V++LN +K+ LH + + + + I +++A+Q+ +D + + + +AN+I TIDGGTH+
Sbjct: 233 FVKFLNRNKEVLHPEPIYIEGEKNQILVEVAIQY-TDQFGENIYSFANNIATIDGGTHLV 291
Query: 365 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 424
G KA++T+ +N KK VK D L GE +R+G+T ++SV++ P+FEGQTKT+LGN
Sbjct: 292 GFKAAVTKAVNEYAKKYNFVKG-DNQLLGEDIRDGMTAVVSVKIHEPQFEGQTKTKLGNS 350
Query: 425 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLV-RQKSVLRSSS 483
E R V+ V E L +LE +PDV I+ K+L A KA A++AR+LV ++KS L SS+
Sbjct: 351 EARWAVENLVSEKLAAFLEENPDVSKKIIDKALLAAKAREEARKARELVIKRKSALDSSN 410
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPL 528
LPGKLADCS PE+ EIFIVEGDSAGGSAKQGRDRR+Q I+ PL
Sbjct: 411 LPGKLADCSEKDPEKCEIFIVEGDSAGGSAKQGRDRRYQAIL-PL 454
>gi|354559350|ref|ZP_08978600.1| DNA gyrase, B subunit [Desulfitobacterium metallireducens DSM
15288]
gi|353542939|gb|EHC12399.1| DNA gyrase, B subunit [Desulfitobacterium metallireducens DSM
15288]
Length = 644
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 244/473 (51%), Positives = 329/473 (69%), Gaps = 14/473 (2%)
Query: 68 FKEN-PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGY 126
F+E P + Y ++QI VLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AGY
Sbjct: 7 FQEKVPENVEYNADQIVVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSIDEALAGY 66
Query: 127 ASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSG 186
IEV + DN++ V DNGRGIP+D+HP K A+E LTVLHAGGKF ++S Y VSG
Sbjct: 67 CDTIEVIIRKDNTICVKDNGRGIPVDIHPKLGKPAVEVALTVLHAGGKF--NNSAYKVSG 124
Query: 187 GLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRF 246
GLHGVGLSVVNALS+ L V V +DG YHQ+Y RGK +T LT + + GT+I F
Sbjct: 125 GLHGVGLSVVNALSKWLYVDVKKDGKMYHQEYERGKTMTELTI----IGESEGSGTQITF 180
Query: 247 WPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEY 306
PD ++F F+ + +A R+REL+FLN K++I L D K++ Y+ GG+ ++
Sbjct: 181 APDPEIFEETTVFEFDILAHRLRELSFLNKKVSITL----IDERKDEREVYYHTGGIIDF 236
Query: 307 VQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 365
V+++N +K LH + F D + +++ +Q+ +D+Y++ + YAN+I T +GGTH G
Sbjct: 237 VKYINKNKDVLHPQPIYFESFKDNVEVEIGIQY-NDSYTENLFSYANNINTQEGGTHEAG 295
Query: 366 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 425
KA+LTR +N +K+ +K D +LSG+ +REG+T +ISV+VP P+FEGQTKT+LGN E
Sbjct: 296 FKAALTRVVNDYARKNNIIKANDANLSGDDIREGMTAVISVKVPEPQFEGQTKTKLGNSE 355
Query: 426 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 485
+R +VD V E L +LE +P V ++ KSL AL+A AA++AR+L R+KS L SSLP
Sbjct: 356 IRSIVDSIVGEGLNIFLEENPAVGKKVIEKSLQALRAREAARKARELTRRKSALEVSSLP 415
Query: 486 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
GKLADCS P+ E+++VEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 416 GKLADCSWKEPDLCEMYLVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNVEKA 467
>gi|27262246|gb|AAN87404.1| DNA gyrase subunit B [Heliobacillus mobilis]
Length = 641
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 245/459 (53%), Positives = 326/459 (71%), Gaps = 14/459 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
TY + QIQVLEGLEAVR+RP MYIGST RGLHHLVYEI+DN++DEA AGY IEV +
Sbjct: 14 TYDASQIQVLEGLEAVRRRPGMYIGSTSARGLHHLVYEIVDNSIDEALAGYCDTIEVIIH 73
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS+ V+DNGRGIP+D+HP K A+E LTVLHAGGKFGG GY VSGGLHGVGLSV
Sbjct: 74 EDNSIEVSDNGRGIPVDIHPKMGKPAVEVALTVLHAGGKFGGE--GYKVSGGLHGVGLSV 131
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALSE L+VTV R+G + Q Y RG +T L V + + GT I F PD +F
Sbjct: 132 VNALSEKLKVTVRRNGKVHEQYYERGVTMTDLKV----VGNAESTGTTIYFKPDGLIFE- 186
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
+++ + T++ R+REL+FLN + I L+ D Q + + GG+ ++V++LN +K
Sbjct: 187 ELEYSYETLSHRLRELSFLNRGVKITLK----DLRTGQESIFAHEGGIIDFVKFLNRNKD 242
Query: 316 PLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+H V+ F+ + +G+ +++ALQ+ +D YS+T+ YAN+I T +GGTH G K +LTR +
Sbjct: 243 LIHPHVIYFQNEKEGVHVEMALQY-NDGYSETLFSYANNINTQEGGTHESGFKTALTRVI 301
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N G++ +K+ D +LSGE +REG+T +ISV+V P+FEGQTKT+LGN EVR + D V
Sbjct: 302 NDYGRRINQIKENDSNLSGEDIREGITAVISVKVREPQFEGQTKTKLGNSEVRGITDSCV 361
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E L+ YLE +P V ++ K+LSA++A AA++AR+L R+KS L S+SLPGKLADCS
Sbjct: 362 TEGLSTYLEENPSVGKKVIEKALSAMRAREAARKARELTRRKSALESTSLPGKLADCSFK 421
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P E++IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 422 DPSMCELYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 459
>gi|336252328|ref|YP_004595435.1| DNA gyrase subunit B [Halopiger xanaduensis SH-6]
gi|335336317|gb|AEH35556.1| DNA gyrase, B subunit [Halopiger xanaduensis SH-6]
Length = 646
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 232/455 (50%), Positives = 319/455 (70%), Gaps = 11/455 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY +I V++
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGYCDDITVSIHE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSVAD+GRGIP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVADDGRGIPVDTHDEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LE V RDG + + +G+PV + V ++ + GT +RFWPD +F A
Sbjct: 125 NALSERLEAEVKRDGGVFRHAFEQGEPVGDME-RVRDMEPDEETGTEVRFWPDTGIFE-A 182
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKE-----DSDPEKNQYNEYFFAGGLEEYVQWLN 311
+F +T+A R+RELAFLN + I LR E D+D E Y + GG+ E+V++LN
Sbjct: 183 GEFSFSTLANRLRELAFLNSGVRITLRDEREDAGDADEEGPVEETYEYEGGIREFVEYLN 242
Query: 312 TDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 370
+ +HD V+ F + I +++A+Q ++ ++ +AN+I T +GGTH+ G K +L
Sbjct: 243 ETRSAMHDDVIYFEDEEQNIQVEVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTAL 301
Query: 371 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
TRT+N ++ + D D +L GE +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V
Sbjct: 302 TRTVNDYANENSMLSDLDNNLKGEDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIV 361
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
+ ++ E L Y E +PD ++I++K++ A KA +AA++A +L R+KS L S+SLPGKLAD
Sbjct: 362 ESAMHEGLGTYFEENPDTAEAIINKAVEAAKARMAAQKAEELTRRKSALESTSLPGKLAD 421
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVII 525
C + P+E+E+FI EGDSAGGSAKQ R+ FQ ++
Sbjct: 422 CQTKDPDEAELFIAEGDSAGGSAKQARNPEFQAVL 456
>gi|194016365|ref|ZP_03054979.1| DNA gyrase, B subunit [Bacillus pumilus ATCC 7061]
gi|194011838|gb|EDW21406.1| DNA gyrase, B subunit [Bacillus pumilus ATCC 7061]
Length = 640
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 245/464 (52%), Positives = 323/464 (69%), Gaps = 11/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I V +
Sbjct: 9 SYDENQIQVLEGLEAVRKRPGMYIGSTSAKGLHHLVWEIVDNSIDEALAGYCTDITVQIE 68
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+ +H + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 69 KDNSITVKDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 126
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS +L+VTV+RDG ++Q++ RG PV L + D GT F PD ++FT
Sbjct: 127 VNALSTTLDVTVYRDGKIHYQQFKRGVPVGDLEI----IGETDVTGTTTHFVPDTEIFTE 182
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
I+FD++T+A R+RELAFL + I + ED K + NEY + GG++ YV+ LN K+
Sbjct: 183 TIEFDYDTLANRVRELAFLTKGVNIVI--EDLREGKERRNEYCYEGGIKSYVEHLNRSKE 240
Query: 316 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+H+ V + DGIT+++ALQ+ +D+Y+ + +AN+I T +GGTH G K LTR +
Sbjct: 241 VVHEEPVYIEGEKDGITVEVALQY-NDSYTSNIYSFANNINTYEGGTHEAGFKTGLTRVI 299
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +K+ KD D +LSGE VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 300 NDYARKNGVFKDGDSNLSGEDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDSLF 359
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E L ++L +PD I+ K + A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 360 SEALEKFLLENPDAAKKIVEKGVMAARARMAAKKARELTRRKSALEVSSLPGKLADCSSK 419
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 420 DPSISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 462
>gi|255994573|ref|ZP_05427708.1| DNA gyrase, B subunit [Eubacterium saphenum ATCC 49989]
gi|255993286|gb|EEU03375.1| DNA gyrase, B subunit [Eubacterium saphenum ATCC 49989]
Length = 651
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 237/482 (49%), Positives = 328/482 (68%), Gaps = 12/482 (2%)
Query: 59 LSSSIATEAFK-ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDN 117
+ +I E FK + K YG+E+IQVLEGLE VRKRP MYIGSTG GLHHLVYEI+DN
Sbjct: 1 MQINIQRERFKMSEKIDKKYGAEEIQVLEGLEPVRKRPGMYIGSTGKPGLHHLVYEIVDN 60
Query: 118 AVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGG 177
++DEA AG+ + I++ + D S+ V DNGRG+P+D+HP A+E + ++LHAGGKF
Sbjct: 61 SIDEALAGHCNEIKICINEDGSIRVEDNGRGMPVDIHPKQKIPAVEVIHSILHAGGKFD- 119
Query: 178 SSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSK 237
+ GY VSGGLHGVG SVVNALS +EV + R+G Y Q+YSRGK +T L + +
Sbjct: 120 ENGGYKVSGGLHGVGASVVNALSSRMEVKIKRNGNLYKQEYSRGKTMTKLEI----IGTS 175
Query: 238 DRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEY 297
G+ F PD Q+F I+FD++T+ R RE+AFLN L I L ED + + N Y
Sbjct: 176 TETGSITEFMPDDQIFDD-IEFDYDTLNYRFREMAFLNKGLKIQL--EDKRKGREKTNTY 232
Query: 298 FFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRT 356
+ GG++E++++ N +K+ LH D++ F K +D +++A+Q+ +D YS+T+L YAN+I T
Sbjct: 233 CYEGGIKEFIKYQNKNKEKLHEDIIFFDKKLDNSQVEVAIQY-TDRYSETLLSYANNINT 291
Query: 357 IDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQ 416
+GG H+ G K++LTR +N KK+K + + D SL GE VREGLT IISV++ NP+FEGQ
Sbjct: 292 TEGGYHLSGFKSALTRVINDYAKKAKLIGENDNSLLGEDVREGLTAIISVKLTNPQFEGQ 351
Query: 417 TKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQK 476
TKT+LGN +R VV+ +V E + +L HP I+ K + + + AAK+ARDL R+K
Sbjct: 352 TKTKLGNSFIRGVVETAVNENVYAFLIEHPKQAKIIIEKCIKSARVREAAKKARDLTRRK 411
Query: 477 SVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFA 536
+ L S +LPGKL+DCS P+ SEIF+VEGDSAGGSA+QGRDR Q ++ PL+ I
Sbjct: 412 TALDSLALPGKLSDCSEKDPKLSEIFLVEGDSAGGSARQGRDRNRQAVL-PLRGKILNVE 470
Query: 537 SA 538
A
Sbjct: 471 KA 472
>gi|344995338|ref|YP_004797681.1| DNA gyrase subunit B [Caldicellulosiruptor lactoaceticus 6A]
gi|343963557|gb|AEM72704.1| DNA gyrase, B subunit [Caldicellulosiruptor lactoaceticus 6A]
Length = 637
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 242/463 (52%), Positives = 323/463 (69%), Gaps = 20/463 (4%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
N S+ Y + +IQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DNA+DEA AG+ NI
Sbjct: 5 NTNSQEYSASEIQVLEGLEAVRKRPGMYIGSTSQRGLHHLVYEIVDNAIDEAMAGFCKNI 64
Query: 131 EVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 190
EV + DNSV+V D+GRGIP+D+HP KS +E V TVLHAGGKF + Y VSGGLHG
Sbjct: 65 EVVIHKDNSVTVIDDGRGIPVDIHPKLQKSGVEVVFTVLHAGGKF--NERVYKVSGGLHG 122
Query: 191 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 250
VG SVVNALS LEV V+RDG Y+Q+Y RGKP TC + + + GT++ F PD
Sbjct: 123 VGASVVNALSRYLEVEVYRDGKVYYQRYERGKP----TCELKVIGETNSTGTKVTFLPDD 178
Query: 251 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYV 307
++F T I+FD + I R+RELAFLN + I R++++ P + +Y+ GG+ E+V
Sbjct: 179 EIFET-IEFDGDVILQRLRELAFLNKGIRIVFVDEREKNAKPIELKYD-----GGIAEFV 232
Query: 308 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 366
++LN +K+ LH + + + + I I++A+Q+ D + + + +AN+I TIDGGTH+ G
Sbjct: 233 KFLNRNKEVLHQEPIYIEGEKNDILIEVAIQYTED-FGENIYSFANNIATIDGGTHLIGF 291
Query: 367 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 426
K ++T+ +N KK +K D L GE +R+G+T I+SV++ P+FEGQTKT+LGN E
Sbjct: 292 KTAVTKAVNEYAKKYNFIKG-DTQLLGEDIRDGMTAIVSVKIHEPQFEGQTKTKLGNSEA 350
Query: 427 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLV-RQKSVLRSSSLP 485
R V+ V E L +LE +PDV I+ K++ A KA AK+AR+LV ++KS L SS+LP
Sbjct: 351 RWAVENLVSEKLAAFLEENPDVSKKIIDKAILAAKAREEAKKARELVIKRKSALDSSNLP 410
Query: 486 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPL 528
GKLADCS P + EIFIVEGDSAGGSAKQGRDRR+Q I+ PL
Sbjct: 411 GKLADCSEKDPAKCEIFIVEGDSAGGSAKQGRDRRYQAIL-PL 452
>gi|19909553|dbj|BAB86972.1| DNA gyrase subunit B [Leptolyngbya boryana IAM M-101]
Length = 546
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 242/431 (56%), Positives = 325/431 (75%), Gaps = 13/431 (3%)
Query: 106 GLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETV 165
GLHHLVYE++DN+VDEA AGY I++++ AD SV+V D+GRGIP +HP T KSALETV
Sbjct: 1 GLHHLVYEVVDNSVDEALAGYCKAIDISINADGSVTVTDDGRGIPTGIHPKTGKSALETV 60
Query: 166 LTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 225
+T+LHAGGKFGG S LHGVG+SVVNALSE +EVTVWR+ + Q++ RG +
Sbjct: 61 MTILHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVEVTVWREKKVHLQRFERGIAMG 118
Query: 226 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIALR 283
L P + R GT + F PD +FT +FD+ T++GR+RELA+LN ++ A
Sbjct: 119 ELQVEPYP---QARTGTSVTFLPDASIFTETTKFDYTTLSGRLRELAYLNGGVRIKFADH 175
Query: 284 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLALQWCSDA 342
+E S+ E + YF+ GG+ EY+ ++N +K+PLH+ V F + +GI +++ALQWCSDA
Sbjct: 176 REGSERE----DVYFYEGGIREYISYMNREKQPLHEEVIFVSGERNGIQVEVALQWCSDA 231
Query: 343 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 402
Y+D ++G+AN+IRT+DGGTH+EG+KA LTRTLN++ +K +K+ + +L+GE++REGLT
Sbjct: 232 YNDNIIGFANNIRTVDGGTHLEGLKAVLTRTLNTIARKRNKIKENESNLAGENIREGLTA 291
Query: 403 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 462
+ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE P+V D+I+ K++ A KA
Sbjct: 292 VISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFRPNVSDAIIEKAVQAFKA 351
Query: 463 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 522
A AA+ AR++VR+KSVL SS+LPGKLADC+S P ESEI+IVEGDSAGGSAKQGRDRRFQ
Sbjct: 352 AEAARHAREMVRRKSVLESSTLPGKLADCASRDPSESEIYIVEGDSAGGSAKQGRDRRFQ 411
Query: 523 VIINPLQESIF 533
I+ PL+ I
Sbjct: 412 AIL-PLRGKIL 421
>gi|150020566|ref|YP_001305920.1| DNA gyrase subunit B [Thermosipho melanesiensis BI429]
gi|149793087|gb|ABR30535.1| DNA gyrase, B subunit [Thermosipho melanesiensis BI429]
Length = 627
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 241/458 (52%), Positives = 317/458 (69%), Gaps = 16/458 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ I+VL+GLE VR+RP MYIGSTG GLHHLVYEI+DN+VDEA GY I V +
Sbjct: 3 YNAQNIKVLKGLEPVRQRPGMYIGSTGKAGLHHLVYEIVDNSVDEALQGYCDKIYVTIFK 62
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV + DNGRGIP+D+HP T KSALE V+T LHAGGKF S Y VSGGLHGVG SVV
Sbjct: 63 DGSVEIKDNGRGIPVDIHPETGKSALEVVMTTLHAGGKF--SKDSYKVSGGLHGVGASVV 120
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LEV V RDG Y+QKY RG P+T V + D +GT +RF PD ++F+T
Sbjct: 121 NALSEWLEVEVHRDGKIYYQKYQRGTPLT----EVRIIGETDYRGTIVRFKPDTEIFST- 175
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
++FD +TI R+RELAFLNP +T+ + E + EK + F GGL+E+V L+ +
Sbjct: 176 VEFDSDTILIRLRELAFLNPNITVVFKDERENIEKT----FHFTGGLKEFVVHLSKGTRS 231
Query: 317 LHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNS 376
LH+ + + + I +D+ Q+ + + + + + N+IRT+DGGTH+ G K + TR +N
Sbjct: 232 LHEPILVSGEYNSIKVDVCFQYTASDF-EKIYSFVNNIRTVDGGTHVTGFKTAFTRVVNE 290
Query: 377 LGKKSKTVKDKDISLSGEHVREGLTCIISVRV-PNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
LGKK+ +K KD +L GE +REG+ I+SV + PEFEGQTK++LGN EV++ V + V+
Sbjct: 291 LGKKTGQLK-KD-TLRGEDIREGIVAIVSVLMSKTPEFEGQTKSKLGNEEVQEAVAKVVR 348
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L EY E + + L I+ K+L A KA AAK AR+++++KSV SSSLPGKLADC +
Sbjct: 349 EKLLEYFESNENTLKIIIQKALEAKKAREAAKHAREMIKRKSVFGSSSLPGKLADCITKK 408
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
EESE+FIVEGDSAGGSAKQ RDR FQ I+ PL+ I
Sbjct: 409 MEESELFIVEGDSAGGSAKQARDRNFQAIL-PLRGKIL 445
>gi|389574651|ref|ZP_10164711.1| DNA gyrase, B subunit [Bacillus sp. M 2-6]
gi|388425773|gb|EIL83598.1| DNA gyrase, B subunit [Bacillus sp. M 2-6]
Length = 640
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 245/464 (52%), Positives = 323/464 (69%), Gaps = 11/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I V +
Sbjct: 9 SYDENQIQVLEGLEAVRKRPGMYIGSTSAKGLHHLVWEIVDNSIDEALAGYCTDITVQIE 68
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+ +H + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 69 KDNSITVKDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 126
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS +L+VTV+RDG ++Q++ RG PV L + D GT F PD ++FT
Sbjct: 127 VNALSTTLDVTVYRDGKIHYQQFKRGVPVGDLEV----IGETDVTGTTTHFVPDPEIFTE 182
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
I+FD++T+A R+RELAFL + I + ED K + NEY + GG++ YV+ LN K+
Sbjct: 183 TIEFDYDTLANRVRELAFLTKGVNIII--EDLREGKERRNEYCYEGGIKSYVEHLNRSKE 240
Query: 316 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+H+ V + DGIT+++ALQ+ +D+Y+ + +AN+I T +GGTH G K LTR +
Sbjct: 241 VVHEEPVYIEGEKDGITVEVALQY-NDSYTSNIYSFANNINTYEGGTHEAGFKTGLTRVI 299
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +K+ KD D +LSGE VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 300 NDYARKNGVFKDGDSNLSGEDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDSLF 359
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E L ++L +PD I+ K + A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 360 SEALEKFLLENPDAAKKIVEKGVMAARARMAAKKARELTRRKSALEVSSLPGKLADCSSK 419
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 420 DPSISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 462
>gi|408355369|ref|YP_006843900.1| DNA gyrase subunit B [Amphibacillus xylanus NBRC 15112]
gi|407726140|dbj|BAM46138.1| DNA gyrase subunit B [Amphibacillus xylanus NBRC 15112]
Length = 640
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 233/464 (50%), Positives = 314/464 (67%), Gaps = 10/464 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGY I+V +
Sbjct: 9 QQYDENQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVWEIVDNSIDEALAGYCDEIQVTI 68
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DNS++V DNGRGIP+ +H T + A+E ++T LHAGGKF +SGY VSGGLHGVG S
Sbjct: 69 EEDNSITVTDNGRGIPVGIHEKTGRPAVEVIMTELHAGGKF--DNSGYKVSGGLHGVGAS 126
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS SL+V V RD Y+ + RG L + + D GT+I F PD +FT
Sbjct: 127 VVNALSTSLKVYVHRDNNIYYLDFKRG----VLNTEIKVIGQTDTTGTKIHFSPDPDIFT 182
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
+FD+ T+ RIRELAFLN K+ I++ ED K + +++ GG++EYV+++N K
Sbjct: 183 ETTEFDYETLLYRIRELAFLNKKIKISI--EDKRKGKERKQTFYYEGGIKEYVEYMNRSK 240
Query: 315 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+ LH+ K+ + I +++ALQ+ S YS + +AN+I T +GG H G K +LTR +
Sbjct: 241 EVLHETFFAEKEEEDIIVEVALQYNS-GYSSNIYSFANNIHTHEGGMHESGFKTALTRVI 299
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +K+K KD D +L+G+ VREG+T I+S++ P+P+FEGQTKT+LGN E R + D +
Sbjct: 300 NDYARKTKIFKDNDENLTGDDVREGITAIVSIKHPDPQFEGQTKTKLGNSEARTITDSAF 359
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E ++L +PD I++K + A +A +AAK+AR+L R+K L SSLPGKLADCSS
Sbjct: 360 SEMFYKFLVENPDTAKIIVNKGVMASRARMAAKKARELTRRKGALEISSLPGKLADCSSR 419
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 420 DASISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 462
>gi|157690804|ref|YP_001485266.1| DNA gyrase subunit B [Bacillus pumilus SAFR-032]
gi|157679562|gb|ABV60706.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Bacillus pumilus
SAFR-032]
Length = 642
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 245/464 (52%), Positives = 323/464 (69%), Gaps = 11/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I V +
Sbjct: 11 SYDENQIQVLEGLEAVRKRPGMYIGSTSAKGLHHLVWEIVDNSIDEALAGYCTDITVQIE 70
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+ +H + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 71 KDNSITVKDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 128
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS +L+VTV+RDG ++Q++ RG PV L + D GT F PD ++FT
Sbjct: 129 VNALSTTLDVTVYRDGKIHYQQFKRGVPVGDLEI----IGETDVTGTTTHFVPDPEIFTE 184
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
I+FD++T+A R+RELAFL + I + ED K + NEY + GG++ YV+ LN K+
Sbjct: 185 TIEFDYDTLANRVRELAFLTKGVNIII--EDLREGKERRNEYCYEGGIKSYVEHLNRSKE 242
Query: 316 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+H+ V + DGIT+++ALQ+ +D+Y+ + +AN+I T +GGTH G K LTR +
Sbjct: 243 VVHEEPVYIEGERDGITVEVALQY-NDSYTSNIYSFANNINTYEGGTHEAGFKTGLTRVI 301
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +K+ KD D +LSGE VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 302 NDYARKNGVFKDGDSNLSGEDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDSLF 361
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E L ++L +PD I+ K + A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 362 SEALEKFLLENPDAAKKIVEKGVMAARARMAAKKARELTRRKSALEVSSLPGKLADCSSK 421
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 422 DPSISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 464
>gi|451342761|ref|ZP_21911844.1| DNA gyrase, B subunit [Eggerthia catenaformis OT 569 = DSM 20559]
gi|449338492|gb|EMD17637.1| DNA gyrase, B subunit [Eggerthia catenaformis OT 569 = DSM 20559]
Length = 641
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 245/473 (51%), Positives = 322/473 (68%), Gaps = 12/473 (2%)
Query: 68 FKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYA 127
++ V+ +Y IQVLEGLE VRKRP MYIG+T RGLHHLV+EI+DN++DEA AG+
Sbjct: 1 MEDTRVNHSYSDNDIQVLEGLEPVRKRPGMYIGTTSSRGLHHLVWEIVDNSIDEALAGFC 60
Query: 128 SNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGG 187
S I+V++L DN + V DNGRG+P + T S +ET+ TVLHAGGKFG GY VSGG
Sbjct: 61 SEIKVSILKDNIIKVVDNGRGMPTGTNTKTGLSTVETIFTVLHAGGKFG--EGGYKVSGG 118
Query: 188 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG-KPVTTLTCHVLPVDSKDRQGTRIRF 246
LHGVG SVVNALSE LEV V RDG Y+Q++ G KPV TL+ + D +D GT + F
Sbjct: 119 LHGVGASVVNALSEYLEVYVHRDGHIYYQRFEDGGKPVNTLS---IIGDCED-TGTTVLF 174
Query: 247 WPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEY 306
D +FT +D + + R+RELAFLN L + + D EK + N Y + GGL EY
Sbjct: 175 KADPAIFTETTIYDFDILNQRVRELAFLNKGLKLII--ADEREEKIKENIYHYEGGLREY 232
Query: 307 VQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 365
V +LN +K LHD ++ + +DGI++++A+Q+ +D+Y + +AN+I TI+GG H EG
Sbjct: 233 VAYLNKNKTALHDEIIDCEETIDGISVEVAMQY-NDSYQSNIYSFANNIHTIEGGMHEEG 291
Query: 366 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 425
+A+LTR +N+ G+ S +K+KD +LSGE REGLT IISV+ PNP+FEGQTKT+LGN E
Sbjct: 292 FRAALTRVINNYGRTSGALKEKDENLSGEDCREGLTAIISVKHPNPQFEGQTKTKLGNAE 351
Query: 426 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 485
VRK+ L ++L +PDV I+ K A KA +AAKRAR++ R+K+ L + LP
Sbjct: 352 VRKISRTIFANALDKFLMENPDVAKIIMDKVTLASKARMAAKRAREMTRRKTALDIADLP 411
Query: 486 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
GKLADCSS P E EI+IVEGDSAGGSAK GRDRR Q I+ PL+ I A
Sbjct: 412 GKLADCSSKDPSECEIYIVEGDSAGGSAKSGRDRRTQAIL-PLRGKILNVEKA 463
>gi|222100717|ref|YP_002535285.1| DNA gyrase subunit B [Thermotoga neapolitana DSM 4359]
gi|221573107|gb|ACM23919.1| DNA gyrase subunit B [Thermotoga neapolitana DSM 4359]
Length = 636
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 244/465 (52%), Positives = 330/465 (70%), Gaps = 22/465 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +E I+VL+GLE VR RP MYIGSTG RGLHHLVYE++DN+VDE+ AGY I+V L
Sbjct: 4 YSAESIKVLKGLEPVRMRPGMYIGSTGKRGLHHLVYEVVDNSVDESLAGYCDWIKVTLHE 63
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV V DNGRGIP+D+HP +SALE V TVLHAGGKF S Y +SGGLHGVG+SVV
Sbjct: 64 DGSVEVEDNGRGIPVDVHPEEGRSALEVVFTVLHAGGKF--SKDSYKISGGLHGVGVSVV 121
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LEV V+RDG Y Q+Y RGKPVT + + D+ GT +RF PD +F+
Sbjct: 122 NALSEWLEVRVYRDGKIYRQRYERGKPVTLVEV----IGETDKHGTVVRFKPDPLIFSET 177
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+FD + + R+RE+AFL P L I E D N+ + F GGL+E+V++LN KK
Sbjct: 178 -EFDPDILEHRLREIAFLVPGLKI----EFEDRINNEKKTFKFDGGLKEFVKYLNRGKKV 232
Query: 317 LHDVVGFRK--------DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
LHDV+ ++ D + +++A Q+ +D+YS+ +L +AN+I+T+DGGTH+ K
Sbjct: 233 LHDVIYLKRTEKVKVKDKEDEVIVEIAFQY-TDSYSEEILSFANTIKTVDGGTHVTAFKT 291
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
+LTR +N G+K +K+ D S G+ VREGLT +ISV V NPEFEGQTK++LGN EV++
Sbjct: 292 TLTRLMNEYGRKHNFLKNGD-SFQGDDVREGLTAVISVYVKNPEFEGQTKSKLGNEEVKE 350
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
V+++++E L + + PD++ +ILSK +S +A AA+RAR++VR+K+VL+S++LPGKL
Sbjct: 351 AVNRAMREELKKIFDASPDLVRTILSKIMSTKQAREAARRAREMVRRKNVLQSTTLPGKL 410
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCSST E +E+FIVEGDSAGGSAKQ RDR FQ ++ P++ I
Sbjct: 411 ADCSSTDRENTELFIVEGDSAGGSAKQARDRVFQAVL-PIRGKIL 454
>gi|407980739|ref|ZP_11161515.1| DNA gyrase subunit B [Bacillus sp. HYC-10]
gi|407412505|gb|EKF34300.1| DNA gyrase subunit B [Bacillus sp. HYC-10]
Length = 638
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 245/464 (52%), Positives = 322/464 (69%), Gaps = 11/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I V +
Sbjct: 7 SYDENQIQVLEGLEAVRKRPGMYIGSTNAKGLHHLVWEIVDNSIDEALAGYCTDITVQIE 66
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+ +H + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 67 KDNSITVKDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 124
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS +L+VTV+RDG ++Q++ RG PV L + D GT F PD ++FT
Sbjct: 125 VNALSTTLDVTVYRDGKIHYQQFKRGVPVGDLKV----IGETDVTGTTTHFVPDPEIFTE 180
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
+FD++T+A R+RELAFL + I + ED K + NEY + GG++ YV+ LN K+
Sbjct: 181 TTEFDYDTLANRVRELAFLTKGVNIVI--EDLREGKERRNEYCYEGGIKSYVEHLNRSKE 238
Query: 316 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+H+ V + DGIT+++ALQ+ +D+Y+ + +AN+I T +GGTH G K LTR +
Sbjct: 239 VVHEEPVYIEGEKDGITVEVALQY-NDSYTSNIYSFANNINTYEGGTHEAGFKTGLTRVI 297
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +K+ KD D +LSGE VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 298 NDYARKNGVFKDGDSNLSGEDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDSLF 357
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E L ++L +PD I+ K L A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 358 SEALEKFLLENPDAAKKIVEKGLMAARARMAAKKARELTRRKSALEVSSLPGKLADCSSK 417
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 418 DPSISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 460
>gi|302870737|ref|YP_003839373.1| DNA gyrase subunit B [Caldicellulosiruptor obsidiansis OB47]
gi|302573596|gb|ADL41387.1| DNA gyrase, B subunit [Caldicellulosiruptor obsidiansis OB47]
Length = 638
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 244/464 (52%), Positives = 324/464 (69%), Gaps = 21/464 (4%)
Query: 71 NPVSKT-YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
NP K Y + +IQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DNA+DEA AGY N
Sbjct: 5 NPGEKQEYSASEIQVLEGLEAVRKRPGMYIGSTSQRGLHHLVYEIVDNAIDEAMAGYCKN 64
Query: 130 IEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 189
IEV + DNSV+V D+GRGIP+D+HP KS +E V TVLHAGGKF + Y VSGGLH
Sbjct: 65 IEVIIHKDNSVTVIDDGRGIPVDIHPKLQKSGVEVVFTVLHAGGKF--NERVYKVSGGLH 122
Query: 190 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 249
GVG SVVNALS LEV V+RDG Y+Q+Y +GKPV C + + + D+ GT++ F PD
Sbjct: 123 GVGASVVNALSCYLEVEVYRDGKVYYQRYEKGKPV----CELKVIGTTDKTGTKVTFLPD 178
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEY 306
++F T I+FD + I R+RELAFLN + I R+++ P + +Y+ GG+ E+
Sbjct: 179 DEIFET-IEFDGDVILQRLRELAFLNKGIRIVFLDEREKNPKPVELKYD-----GGIAEF 232
Query: 307 VQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 365
V++LN +K+ LH + + + + I I++A+Q+ D + + + +AN+I TIDGGTH+ G
Sbjct: 233 VKFLNRNKEVLHQEPIYIEGEKNDILIEVAVQYTDD-FGENIYSFANNIATIDGGTHLIG 291
Query: 366 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 425
K ++T+ +N KK +K D L GE +R+G+T I+SV++ P+FEGQTKT+LGN E
Sbjct: 292 FKTAVTKAVNEYAKKYNFIKG-DTQLLGEDIRDGMTAIVSVKIHEPQFEGQTKTKLGNSE 350
Query: 426 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLV-RQKSVLRSSSL 484
R V+ V E L +LE +PDV I+ K++ A KA AK+AR+LV ++KS L SS+L
Sbjct: 351 ARWAVENLVSEKLATFLEENPDVSKKIIDKAILAAKAREEAKKARELVIKRKSALDSSNL 410
Query: 485 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPL 528
PGKLADCS P + EIFIVEGDSAGGSAKQGRDRR+Q I+ PL
Sbjct: 411 PGKLADCSEKDPAKCEIFIVEGDSAGGSAKQGRDRRYQAIL-PL 453
>gi|20090442|ref|NP_616517.1| DNA topoisomerase subunit B [Methanosarcina acetivorans C2A]
gi|19915457|gb|AAM04997.1| DNA topoisomerase (ATP-hydrolyzing), subunit B [Methanosarcina
acetivorans C2A]
Length = 634
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 245/460 (53%), Positives = 324/460 (70%), Gaps = 13/460 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y + +IQVLEGLEAVRKRP+MYIGST RGLHHLVYE++DN++DEA AG+ + ++V +
Sbjct: 5 QVYDASRIQVLEGLEAVRKRPSMYIGSTDSRGLHHLVYEVVDNSIDEALAGFCTRVDVTI 64
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
D SV+V DNGRGIPID HP KSALE V+TVLHAGGKF ++ Y VSGGLHGVG+S
Sbjct: 65 NPDGSVTVLDNGRGIPIDPHPVHKKSALEVVMTVLHAGGKFDKNT--YKVSGGLHGVGVS 122
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALSE L V V RDG +Y Q+Y RGKP V + + GT+ F PD ++F
Sbjct: 123 VVNALSEWLNVEVERDGKKYFQRYIRGKP----EAEVQETGTSEITGTKTTFKPDARIFE 178
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
T F ++ ++ R+RELAFLN LTI L K+ PE Q + ++GG+ E+V++LN K
Sbjct: 179 TT-DFQYDILSNRLRELAFLNRGLTINL-KDLRSPE-GQAETFIYSGGIVEFVEYLNKKK 235
Query: 315 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+PLH+ + F + D + +++A+Q+ +++Y++ + +AN+I T +GGTHI G K +LTR
Sbjct: 236 QPLHEKPIYFERQRDDMVVEIAMQY-TNSYTENVYSFANNINTHEGGTHIIGFKTALTRV 294
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
N K +K K+ D L+G+ VREGLT IISV++ P+FEGQTKTRLGN EV+ +VD
Sbjct: 295 ANDYIKANKLSKE-DAKLTGDDVREGLTAIISVKLMEPQFEGQTKTRLGNSEVKGIVDSL 353
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
V + L EY E +P V + IL K+L A KA AAK+AR+L R+KS L S+LPGKLADCS
Sbjct: 354 VTDGLAEYFEENPKVANVILEKALLAQKAREAAKKARELTRRKSALEVSTLPGKLADCSE 413
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P EI+IVEG+SAGGSAKQGRDR FQ I+ PL+ I
Sbjct: 414 KDPSVCEIYIVEGNSAGGSAKQGRDRGFQAIL-PLRGKIL 452
>gi|365874562|ref|ZP_09414095.1| DNA gyrase, B subunit [Thermanaerovibrio velox DSM 12556]
gi|363984649|gb|EHM10856.1| DNA gyrase, B subunit [Thermanaerovibrio velox DSM 12556]
Length = 636
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 241/471 (51%), Positives = 320/471 (67%), Gaps = 19/471 (4%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
PVS+ Y ++ IQVLEGL AVRKRP MYIG G RGLHHLVYE++DNA+DEA AG+ I+
Sbjct: 4 PVSQ-YTAKDIQVLEGLSAVRKRPGMYIGDQGQRGLHHLVYEVVDNAIDEAMAGFCDTIQ 62
Query: 132 VALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 191
V + D SVSV DNGRGIP ++HP + A E VLTVLHAG KF Y VSGGLHGV
Sbjct: 63 VTVHPDGSVSVEDNGRGIPTEMHPTMGRPAAEVVLTVLHAGAKF--DKKAYQVSGGLHGV 120
Query: 192 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 251
G+SVVNALSE LEVT+WR+ E+ Q Y RG PVT L + D++GTR+ F PD +
Sbjct: 121 GVSVVNALSEWLEVTIWRNRKEHRQSYRRGVPVTDLVIG----EDTDKRGTRVHFMPDGE 176
Query: 252 VFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLN 311
+F+T ++F + + GR+RELAFLNP +TI +P + + F GG+ +V++LN
Sbjct: 177 IFST-LEFSSDVLLGRLRELAFLNPGVTIIFTDLRQNPPLER--KLHFEGGIASFVEYLN 233
Query: 312 TDK----KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
K KP V G + DG+ +++ALQ+ +D Y + + +AN I T++GGTH+ G +
Sbjct: 234 RGKEVLFKPPMVVKG---EKDGVIVEVALQY-NDTYLERIFAFANLINTVEGGTHVSGFR 289
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
+LTR +N +K K +KDKD + SG+ ++EGLT +ISV++ P+FEGQTKT+LGN +V+
Sbjct: 290 TALTRIINDQARKEKLLKDKDPNFSGDDLKEGLTAVISVKLLEPQFEGQTKTKLGNGDVK 349
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
+VD V E L LE P VL ++ K++ A +A AAK+ARDLVR+KS + LPGK
Sbjct: 350 GIVDSVVYEGLKVLLEDQPQVLRPVVEKAVKARQAREAAKKARDLVRRKSAMSGMDLPGK 409
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LADCS+ PEE E++IVEGDSAGGSAK GRDR FQ I+ PL+ I A
Sbjct: 410 LADCSNRKPEECELYIVEGDSAGGSAKMGRDRSFQAIL-PLRGKILNVEKA 459
>gi|147921290|ref|YP_684896.1| type II DNA topoisomerase II (gyrase), subunit B [Methanocella
arvoryzae MRE50]
gi|110620292|emb|CAJ35570.1| type II DNA topoisomerase II (gyrase), subunit B [Methanocella
arvoryzae MRE50]
Length = 635
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 234/466 (50%), Positives = 327/466 (70%), Gaps = 15/466 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++TY + IQVLEGLEAVRKRP+MYIGST RGLHHLVYE++DN++DEA AGY + I+V
Sbjct: 7 AQTYDASSIQVLEGLEAVRKRPSMYIGSTDYRGLHHLVYEVVDNSIDEALAGYCNAIDVT 66
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ + SV+V DNGRGIP+++H K ALE V+T+LHAGGKF + Y VSGGLHGVG+
Sbjct: 67 INPNGSVTVTDNGRGIPVEMHEKYKKPALEIVMTILHAGGKFDNRT--YKVSGGLHGVGV 124
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE LEV V R+G + Q+Y +GKPV C V + D+ GT+ F PDK +F
Sbjct: 125 SVVNALSEYLEVEVKRNGKVFFQRYEKGKPV----CEVKIIGETDQTGTKTTFKPDKSIF 180
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T ++F + +A R+RELA+LN + I L SD + EY + GG+ +++++LN D
Sbjct: 181 ET-VEFQFDILANRLRELAYLNKGIRITL----SDLGAQKSAEYHYEGGINQFIEYLNQD 235
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K LH + F ++ D +++++Q+ +D YS+ +L +AN+I T +GGTH+ G +A+LTR
Sbjct: 236 KTVLHPKPIYFEREKDTTKVEISMQY-NDGYSEVILAFANNINTHEGGTHLSGFRAALTR 294
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
T+N +K+ +K D+ LSGE +REGLT IISV++ NP+FEGQTKT+LGN +V+ +V+
Sbjct: 295 TVNDYARKNNMLKG-DMVLSGEDIREGLTAIISVKLTNPQFEGQTKTKLGNSDVKGIVES 353
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
V + L +YLE +P I+ K++ A +A AA++AR+L R+KS L S+LPGKLADCS
Sbjct: 354 LVGDGLNDYLEENPADARKIIEKTVQAFQAREAARKARELTRRKSALEGSTLPGKLADCS 413
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
+ E++IVEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 414 EKDASKCELYIVEGDSAGGSAKQGRNRLFQAIL-PLRGKILNVEKA 458
>gi|337744370|ref|YP_004638532.1| protein GyrB [Paenibacillus mucilaginosus KNP414]
gi|386720575|ref|YP_006186900.1| DNA gyrase subunit B [Paenibacillus mucilaginosus K02]
gi|336295559|gb|AEI38662.1| GyrB [Paenibacillus mucilaginosus KNP414]
gi|384087699|gb|AFH59135.1| DNA gyrase subunit B [Paenibacillus mucilaginosus K02]
Length = 637
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 243/469 (51%), Positives = 324/469 (69%), Gaps = 14/469 (2%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
NP TY QIQVLEGLEAVRKRP MYIGST RGLHHLV+E++DN++DEA AGY + I
Sbjct: 4 NP-GTTYDESQIQVLEGLEAVRKRPGMYIGSTSARGLHHLVWEVVDNSIDEALAGYCTRI 62
Query: 131 EVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 190
EV + DNS++V DNGRGIP+ HP KS LE VLTVLHAGGKFGG GY VSGGLHG
Sbjct: 63 EVIVHKDNSITVIDNGRGIPVGEHPKLKKSTLEVVLTVLHAGGKFGGE--GYKVSGGLHG 120
Query: 191 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 250
VG+SVVNALS+ LEV V R+G Y Q+Y G P + + + GT++ FWPD+
Sbjct: 121 VGVSVVNALSKKLEVQVKREGKVYQQEYRCGAP----QYDIKEIGESEMTGTQVTFWPDE 176
Query: 251 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWL 310
++FT ++D +T+ RIRELAFLN + I L E +D + + + GG+ +V+ L
Sbjct: 177 EIFTETTEYDFDTLQSRIRELAFLNKGIEIVLTDERTDISQT----FIYEGGIISFVEHL 232
Query: 311 NTDKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
N +++P+H + + D I +++ALQ+ +D+Y++ + +AN+I T +GGTH G K++
Sbjct: 233 NQNREPVHQPPIYVEGEKDHIQVEVALQY-NDSYTENIYSFANNINTHEGGTHESGFKSA 291
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
LTR LN +K +K+ D +LSG+ VREGLT IISV++P+P+FEGQTKT+LGN EVR +
Sbjct: 292 LTRILNEYARKYNAIKESDANLSGDDVREGLTAIISVKIPDPQFEGQTKTKLGNSEVRGI 351
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
V+ E L E+L+ +P + I+ K + A +A AA++AR+L R+KS L SSLPGKLA
Sbjct: 352 VESLFAEKLEEFLQENPAIAKKIVEKGVQAQRAREAARKARELTRRKSALEVSSLPGKLA 411
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
DCSS SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 412 DCSSKDASISEVYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 459
>gi|410463742|ref|ZP_11317238.1| DNA gyrase, B subunit [Desulfovibrio magneticus str. Maddingley
MBC34]
gi|409983126|gb|EKO39519.1| DNA gyrase, B subunit [Desulfovibrio magneticus str. Maddingley
MBC34]
Length = 804
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 241/464 (51%), Positives = 323/464 (69%), Gaps = 13/464 (2%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
++ + Y + I VLEGL AVRKRPAMYIGST RGLHHLVYE++DN++DE+ AGY
Sbjct: 3 QDKTPQAYDASSITVLEGLSAVRKRPAMYIGSTDIRGLHHLVYEVVDNSIDESMAGYCDR 62
Query: 130 IEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 189
I + + DNSV+V+DNGRGIP+D+HP + A+E V+TVLHAGGKF + Y VSGGLH
Sbjct: 63 IGITIHLDNSVTVSDNGRGIPVDMHPKEGRPAVEVVMTVLHAGGKF--DNDAYKVSGGLH 120
Query: 190 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 249
GVG+SVVNALSE LEVTV R G ++HQ+Y RG PVT LT + + GT +RF PD
Sbjct: 121 GVGVSVVNALSEYLEVTVRRGGKKHHQRYERGVPVTALTV----IGEAENTGTTVRFLPD 176
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 309
+++F T QF+H T+A R ELA+LN KL + R E + N+ Y F GGL E+V
Sbjct: 177 EEIFETN-QFNHETLAKRFEELAYLNRKLELDFRDERT----NERATYRFDGGLNEFVAD 231
Query: 310 LNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
LN ++ +HD++ +VDG+ +D ALQ+ ++ Y + +L +AN+IRT +GGTH+ G K +
Sbjct: 232 LNAGEQTIHDIISGLGEVDGLVVDFALQYNAN-YKEEVLTFANNIRTREGGTHLAGFKTA 290
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
LTR +N+ +K+ K L+G+ VREGLT +ISV++P P+FEGQTKT+LGN EV
Sbjct: 291 LTRAINTYIEKADIPKKFKQKLTGDDVREGLTAVISVKLPQPQFEGQTKTKLGNSEVAGQ 350
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
V + V E + + E +P +I+ K++ A +A AA++A++LVR+K L SLPGKLA
Sbjct: 351 VAKMVFEAMNTHFEENPKDAKAIVEKAVDAARAREAARKAKELVRRKGALSDHSLPGKLA 410
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
DC S PEESE+FIVEGDSAGGSAKQGRD RFQ I+ PL+ I
Sbjct: 411 DCQSKKPEESELFIVEGDSAGGSAKQGRDPRFQAIL-PLRGKIL 453
>gi|357014909|ref|ZP_09079908.1| DNA gyrase subunit B [Paenibacillus elgii B69]
Length = 636
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 240/468 (51%), Positives = 321/468 (68%), Gaps = 13/468 (2%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
NP TY QIQVLEGLEAVRKRP MYIGST RGLHHLV+E++DN++DEA AGY + I
Sbjct: 4 NP-GTTYDESQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVWEVVDNSIDEALAGYCTRI 62
Query: 131 EVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 190
V + DNSV+V DNGRGIP+ +P KS +E VLTVLHAGGKFGG GY VSGGLHG
Sbjct: 63 HVIVHRDNSVTVIDNGRGIPVGENPKLKKSTVEVVLTVLHAGGKFGGE--GYKVSGGLHG 120
Query: 191 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 250
VG+SVVNALS+ L V V R+G + Q+Y G P L + D GT++ FWPD+
Sbjct: 121 VGVSVVNALSKKLIVEVKREGKVHQQEYRCGVPQQELQV----IGESDETGTKVTFWPDE 176
Query: 251 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWL 310
Q+FT ++ + T+ RIRELAFLN + I L E +D ++ +F+ GG+ +V++L
Sbjct: 177 QIFTETTEYSYETLQSRIRELAFLNKGIEITLTDERTDVSQS----FFYEGGIISFVEFL 232
Query: 311 NTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 370
N +++ LH + D I +++ALQ+ +D+Y++ + +AN+I T +GGTH G K++L
Sbjct: 233 NQNREALHQAIYVEGQKDNIQVEIALQY-NDSYTENIYSFANNINTHEGGTHESGFKSAL 291
Query: 371 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
TR LN +K +KD D +L+G+ VREG+T IISV++P P+FEGQTKT+LGN EVR +V
Sbjct: 292 TRILNDFARKFNAIKDSDANLTGDDVREGITAIISVKIPEPQFEGQTKTKLGNSEVRGIV 351
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
+ E L E+++ +P + I+ K + A +A AA++AR+L R+KS L SSLPGKLAD
Sbjct: 352 ESLFAEKLQEFMDENPTIARKIIEKGVQAQRAREAARKARELTRRKSALEVSSLPGKLAD 411
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
CSS SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 412 CSSKDASISEVYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 458
>gi|379718020|ref|YP_005310151.1| protein GyrB [Paenibacillus mucilaginosus 3016]
gi|378566692|gb|AFC27002.1| GyrB [Paenibacillus mucilaginosus 3016]
Length = 637
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 247/469 (52%), Positives = 321/469 (68%), Gaps = 14/469 (2%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
NP TY QIQVLEGLEAVRKRP MYIGST RGLHHLV+E++DN++DEA AGY + I
Sbjct: 4 NP-GTTYDESQIQVLEGLEAVRKRPGMYIGSTSARGLHHLVWEVVDNSIDEALAGYCTRI 62
Query: 131 EVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 190
EV + DNS++V DNGRGIP+ HP KS LE VLT HAGGKFGG SGY VSGGLHG
Sbjct: 63 EVIVHKDNSITVIDNGRGIPVGEHPKLKKSTLEVVLT--HAGGKFGGDESGYKVSGGLHG 120
Query: 191 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 250
VG+SVVNALS+ L V V R+G + Q++S G P L + + GT+ FWPD+
Sbjct: 121 VGISVVNALSKKLVVQVKREGKVHQQEFSCGVPQYDLKI----IGETEETGTQATFWPDE 176
Query: 251 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWL 310
++F ++D +T+ RIRELAFLN + I L E SD N + + GG+ +V+ L
Sbjct: 177 EIFKETTEYDFDTLQSRIRELAFLNKGIEIVLTDERSDVS----NSFMYEGGIVSFVEHL 232
Query: 311 NTDKKPLHDVVGF-RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
N +++PLH+ F + D IT+++ALQ+ +D Y++ + +AN+I T +GGTH G K++
Sbjct: 233 NRNREPLHEPPIFVEGEKDNITVEVALQY-NDTYAENIYSFANNINTHEGGTHESGFKSA 291
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
LTR LN +K T+KD D +LSG+ VREGLT IISV++P P+FEGQTKT+LGN EVR +
Sbjct: 292 LTRILNEYARKYNTIKDNDANLSGDDVREGLTAIISVKIPEPQFEGQTKTKLGNSEVRGI 351
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
V+ + L E+L +P V I+ K + A +A AA++AR+L R+KS L SSLPGKLA
Sbjct: 352 VESLFSDKLEEFLVENPSVAKKIVEKGVQAQRAREAARKARELTRRKSALEVSSLPGKLA 411
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
DCSS SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 412 DCSSKDASISEVYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 459
>gi|73670270|ref|YP_306285.1| DNA gyrase subunit B [Methanosarcina barkeri str. Fusaro]
gi|72397432|gb|AAZ71705.1| DNA gyrase subunit B [Methanosarcina barkeri str. Fusaro]
Length = 633
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 244/459 (53%), Positives = 322/459 (70%), Gaps = 12/459 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y + IQVLEGLEAVRKRP+MYIGST RGLHHLVYE++DN++DEA AG+ + I V +
Sbjct: 5 QVYDASHIQVLEGLEAVRKRPSMYIGSTDSRGLHHLVYEVVDNSIDEALAGFCTIINVTI 64
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
D SV+V DNGRGIP+D HP KSALE V+TVLHAGGKF ++ Y VSGGLHGVG+S
Sbjct: 65 NPDGSVTVLDNGRGIPVDPHPFHKKSALEVVMTVLHAGGKFDKNT--YKVSGGLHGVGVS 122
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVN LSE LEV V R+G +Y Q+Y RGKP VL + + + GT+ F PD+++F
Sbjct: 123 VVNGLSEWLEVEVAREGKKYFQRYDRGKP----KADVLEIGTSETTGTKTTFKPDEKIFE 178
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
T + FD+ ++ R+RELAFLN LTI+L D Q + + GG+ E+V++LN K
Sbjct: 179 T-LDFDYEILSNRLRELAFLNRGLTISLM--DLRTPDGQAETFTYEGGIVEFVKYLNNKK 235
Query: 315 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+PLH + F + D + +++A+Q+ S +Y++ + +AN+I T +GGTHI G K +LTR
Sbjct: 236 QPLHAPIYFERQRDDMVVEIAMQYTS-SYAENVYSFANNINTHEGGTHIIGFKTALTRVA 294
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N K +K K+ DI L+G+ VREGLT IISV++ P+FEGQTKTRLGN +V+ +VD V
Sbjct: 295 NDYIKANKLSKE-DIKLTGDDVREGLTAIISVKLMEPQFEGQTKTRLGNSDVKGIVDSLV 353
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
+ L EY E +P V + IL K+L A KA AAK+AR+L R+K+ L S+LPGKLADCS
Sbjct: 354 TDGLAEYFEENPKVANVILEKALLAQKAREAAKKARELTRRKNALEVSTLPGKLADCSEK 413
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P EI+IVEG+SAGGSAKQGRDR FQ I+ PL+ I
Sbjct: 414 NPAACEIYIVEGNSAGGSAKQGRDRSFQAIL-PLRGKIL 451
>gi|448399828|ref|ZP_21571061.1| DNA gyrase subunit B [Haloterrigena limicola JCM 13563]
gi|445668281|gb|ELZ20911.1| DNA gyrase subunit B [Haloterrigena limicola JCM 13563]
Length = 643
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 234/463 (50%), Positives = 320/463 (69%), Gaps = 15/463 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY +I V +
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGYCDDITVTIHE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNSVSVAD+GRGIP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DNSVSVADDGRGIPVDTHEEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LE V R+G + + G+PV + V ++ D GT IRFWPD +F T
Sbjct: 125 NALSERLEAEVKRNGGVFRHAFEAGEPVGDME-RVRDMEPDDETGTEIRFWPDTGIFETG 183
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKE-----DSDPEKNQYNEYFFAGGLEEYVQWLN 311
+F +T++ R+RELAFLN + I LR E D P Y + GG+ E+V++LN
Sbjct: 184 -EFAFSTLSNRLRELAFLNSGVRITLRDEREEKSDDGPVAETYE---YDGGIREFVEYLN 239
Query: 312 TDKKPLHDVVGFRKDVD-GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 370
+ +HD V + D D I +++A+Q ++ ++ +AN+I T +GG+H+ G K +L
Sbjct: 240 ETRSAMHDDVIYFDDEDQNIQVEVAMQ-ATEELQGSIHAFANNINTREGGSHLTGFKTAL 298
Query: 371 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
TRT+N ++ + D + +L GE +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V
Sbjct: 299 TRTVNDYANENDLLSDLEDNLKGEDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIV 358
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
+ ++ E L Y E HPD ++I++K++ A KA +AA++A +L R+KS L S+SLPGKLAD
Sbjct: 359 ESAMHEGLGTYFEEHPDTAEAIVTKAVEAAKARMAAQKAEELTRRKSALESTSLPGKLAD 418
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
C + PEE+E+FI EGDSAGGSAKQ R+ FQ ++ P++ I
Sbjct: 419 CQTKDPEEAELFIAEGDSAGGSAKQARNPEFQAVL-PIKGKIL 460
>gi|407472538|ref|YP_006786938.1| DNA gyrase subunit B [Clostridium acidurici 9a]
gi|407049046|gb|AFS77091.1| DNA gyrase subunit B [Clostridium acidurici 9a]
Length = 636
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/469 (49%), Positives = 327/469 (69%), Gaps = 14/469 (2%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
N + TYG+EQIQVLEGLE VRKRP MYIGSTGP+GLHHLVYE++DN++DEA AG I
Sbjct: 4 NQQNVTYGAEQIQVLEGLEPVRKRPGMYIGSTGPKGLHHLVYEVVDNSIDEALAGRCDTI 63
Query: 131 EVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 190
++++ D SV+V+DNG GIP+ +HP T KS +ETVLTVLHAGGKF G + Y VSGGLHG
Sbjct: 64 KISINEDGSVTVSDNGIGIPVAIHPKTGKSTVETVLTVLHAGGKFDGGA--YKVSGGLHG 121
Query: 191 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 250
VG+SVVNALSE LEV + R+G + Q++ G P T L + D GT I F PD
Sbjct: 122 VGVSVVNALSEWLEVVIKREGKIHKQRFEIGIPQTELEV----IGDSDETGTTITFMPDA 177
Query: 251 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWL 310
+F ++F + T+ R+RELAFLN + I D N+ E+F+ GG++ +V+++
Sbjct: 178 TIFD-EVEFKYETLEYRLRELAFLNKGVKIIF----EDKRTNKEQEFFYEGGIKAFVEYM 232
Query: 311 NTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
N +K +H DV+ F + + ++LALQ+ +D YS+ +L +AN+I T +GG+H+ G++++
Sbjct: 233 NRNKDSIHSDVIYFEGEREDSVVELALQYTTD-YSENILAFANNINTHEGGSHLSGLRSA 291
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
LTR +N + + +K+KD +L+G+ VREG+T ++SV++ P+FEGQTKT+LGN E+R +
Sbjct: 292 LTRVINDYARTNSLLKEKDENLTGDDVREGITAVLSVKLSEPQFEGQTKTKLGNSEMRGI 351
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
V+ V + L +LE +P I+ K + A + AA++AR+L R+K+VL SS+LPGKLA
Sbjct: 352 VEGVVYDSLNRFLEENPKEAKIIIDKGIKAARVREAARKARELTRRKNVLESSALPGKLA 411
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
DCS PE+ EI+IVEG+SAGGSAKQGRDR Q I+ PL+ I A
Sbjct: 412 DCSERDPEKCEIYIVEGNSAGGSAKQGRDRSTQAIL-PLRGKIMNIEKA 459
>gi|312897423|ref|ZP_07756847.1| DNA gyrase, B subunit [Megasphaera micronuciformis F0359]
gi|310621484|gb|EFQ05020.1| DNA gyrase, B subunit [Megasphaera micronuciformis F0359]
Length = 647
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 242/467 (51%), Positives = 333/467 (71%), Gaps = 18/467 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+YG++QIQVLEGLEAVRKRP MYIGST +GLHHLVYE++DN++DEA AGY ++IEV +
Sbjct: 18 SYGADQIQVLEGLEAVRKRPGMYIGSTSLKGLHHLVYEVVDNSIDEALAGYCTHIEVTIE 77
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+ +H K A+E VLTVLHAGGKFGG GY +SGGLHGVG+SV
Sbjct: 78 EDNSITVVDNGRGIPVAMH-KIGKPAVEVVLTVLHAGGKFGGD--GYPISGGLHGVGISV 134
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALSE E+ V RDG + ++RG V +L V P++ + +GT++ F PD ++F
Sbjct: 135 VNALSEQTEIEVKRDGFLWKISFARGLTVNSLE-KVRPLEEGEERGTKVWFKPDSEIFPD 193
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
+ +D T+ R+RELAFLN LTI L +D ++ Y++ GGL +VQ+LN ++
Sbjct: 194 TV-YDFETLKIRLRELAFLNKGLTITL----ADKRTDKKEIYYYEGGLTSFVQFLNENRT 248
Query: 316 PLHDVV----GFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
P++ V G + DV +D+ALQ+ +D YS+ +L + N+I T +GGTH+ G ++ LT
Sbjct: 249 PVNQTVISLEGIKSDV---VVDIALQY-NDGYSENILTFVNNIFTEEGGTHLSGFRSGLT 304
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RT+N G+ S +K+ + +LSGE VREGLT IISV+V P+FEGQTKT+LGN EV+ +VD
Sbjct: 305 RTINDYGRSSGIIKENEDNLSGEDVREGLTAIISVKVREPQFEGQTKTKLGNSEVKGIVD 364
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+ + L E+ E HP SI++K+++A +A AA++AR+L R+K+ L SSLPGKLADC
Sbjct: 365 NIISDGLKEFFEEHPAEAKSIVTKNINAARARQAARKARELTRRKNALEISSLPGKLADC 424
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P+ +EI++VEGDSAGGSAKQGRDR+FQ I+ PL+ I A
Sbjct: 425 SEKNPDMTEIYLVEGDSAGGSAKQGRDRKFQAIL-PLRGKIINVEKA 470
>gi|294102629|ref|YP_003554487.1| DNA gyrase subunit B [Aminobacterium colombiense DSM 12261]
gi|293617609|gb|ADE57763.1| DNA gyrase, B subunit [Aminobacterium colombiense DSM 12261]
Length = 634
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 229/466 (49%), Positives = 326/466 (69%), Gaps = 15/466 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y ++ IQVLEGL+AVRKRP MYIG TGPRGLHHLVYE++DN++DEA AGY I V
Sbjct: 5 AKQYTAKDIQVLEGLQAVRKRPGMYIGDTGPRGLHHLVYEVVDNSIDEAIAGYCDKISVV 64
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ D SVSVADNGRGIP + HP++ + A E VLT+LHAGGKF + Y VSGGLHGVG+
Sbjct: 65 IYEDESVSVADNGRGIPTEPHPSSGRPASEVVLTILHAGGKF--DNQAYKVSGGLHGVGV 122
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE LE+T+ R+G+ Q++ RG PVT L+ + + GT +RF PD +F
Sbjct: 123 SVVNALSEWLEITIQRNGLSRTQRFERGVPVTDLS----EGEPSTKTGTYVRFHPDTTIF 178
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
++F + ++GR+RE+AFLNP L I L D + E+ + GG++ ++++LN
Sbjct: 179 -EEVRFSADILSGRLREMAFLNPGLAITL----EDHRSGKCVEFHYEGGIKTFIEYLNKG 233
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K PL + + + DG ++++ +Q+ +D Y + + +AN I TI+GGTH+ G + +LTR
Sbjct: 234 KTPLFPEPIVIAGEKDGASVEIGIQY-NDGYLERIFAFANMIHTIEGGTHVAGFRTALTR 292
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N + +++K +++KD +LSGE ++EGLTC++S+++ NP+FEGQTKT+LGN E++ + D
Sbjct: 293 AVNEVARRAKILREKDENLSGEDLKEGLTCVLSIKLSNPQFEGQTKTKLGNSEIKGITDS 352
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
V E L YL+ H +VL ++ K++ A +A AAK+AR+LVR K+ + +LPGKLADCS
Sbjct: 353 VVYEGLLAYLDEHQEVLKPVVEKAIRARQARDAAKKARELVR-KTAMTGMNLPGKLADCS 411
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P E++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 412 SRDPHVCEVYIVEGDSAGGSAKQGRDRGFQAIL-PLRGKILNVEKA 456
>gi|392391698|ref|YP_006428300.1| DNA gyrase subunit B [Desulfitobacterium dehalogenans ATCC 51507]
gi|390522776|gb|AFL98506.1| DNA gyrase subunit B [Desulfitobacterium dehalogenans ATCC 51507]
Length = 644
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 244/472 (51%), Positives = 327/472 (69%), Gaps = 12/472 (2%)
Query: 68 FKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYA 127
K+ + Y + QI+VLEGLEAVRKRP MYIGST PRGLHHLVYEI+DN++DEA AGY
Sbjct: 7 IKDTIPTNDYNAGQIEVLEGLEAVRKRPGMYIGSTSPRGLHHLVYEIVDNSIDEALAGYC 66
Query: 128 SNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGG 187
IEV + DNS+SV DNGRGIP+D+HP K A+E LTVLHAGGKF GS+ Y VSGG
Sbjct: 67 DTIEVTIHKDNSISVVDNGRGIPVDIHPKLGKPAVEVALTVLHAGGKFSGSA--YKVSGG 124
Query: 188 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 247
LHGVG+SVVNALS L V V +DG YHQ++ RGK T L V+ +++ GT I F
Sbjct: 125 LHGVGMSVVNALSTWLHVEVKKDGNIYHQEFMRGKTKTELA--VIGQIDQNQTGTTITFS 182
Query: 248 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 307
PD ++F + F +T+A R+REL+FLN K++I L E D ++ Y+ GG+ ++V
Sbjct: 183 PDPEIFEDTV-FHFDTLAHRLRELSFLNKKVSITLIDEREDKKE----VYYHTGGIYDFV 237
Query: 308 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 366
+++N K+ LH + + F + DG+ +++++Q+ +D Y + + YAN+I T +GGTH G
Sbjct: 238 KYINRSKEALHPEPIYFEAEKDGVQVEVSMQY-NDGYVENLFSYANNIHTHEGGTHESGF 296
Query: 367 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 426
KA+LTR N +K+ +K + +LSGE +REGLT +ISV+VP P+FEGQTKT+LGN E+
Sbjct: 297 KAALTRVANEYARKNNILKANEANLSGEDIREGLTAVISVKVPEPQFEGQTKTKLGNSEI 356
Query: 427 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 486
R +VD E LT +LE +P ++ KS+ A +A AA++AR+L R+KS L S+LPG
Sbjct: 357 RSIVDSITGEGLTVFLEENPATGKKVIEKSIQASRAREAARKARELTRRKSALEVSALPG 416
Query: 487 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
KLADCS E E++IVEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 417 KLADCSWKEAELCEMYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNVEKA 467
>gi|239904642|ref|YP_002951380.1| DNA gyrase subunit B [Desulfovibrio magneticus RS-1]
gi|239794505|dbj|BAH73494.1| DNA gyrase subunit B [Desulfovibrio magneticus RS-1]
Length = 804
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 240/464 (51%), Positives = 326/464 (70%), Gaps = 13/464 (2%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
++ + Y + I VLEGL AVRKRPAMYIGST RGLHHLVYE++DN++DE+ AGY
Sbjct: 3 QDKTPQAYDASSITVLEGLSAVRKRPAMYIGSTDIRGLHHLVYEVVDNSIDESMAGYCDR 62
Query: 130 IEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 189
I + + DNSV+V+DNGRGIP+D+HP + A+E V+TVLHAGGKF + Y VSGGLH
Sbjct: 63 IGITIHLDNSVTVSDNGRGIPVDIHPKEGRPAVEVVMTVLHAGGKF--DNDAYKVSGGLH 120
Query: 190 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 249
GVG+SVVNALSE LEVTV R G ++HQ+Y RG PVT LT + + GT IRF PD
Sbjct: 121 GVGVSVVNALSEYLEVTVRRGGKKHHQRYERGAPVTALTV----IGEAENTGTTIRFLPD 176
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 309
+++F T+ QF+H T+A R ELA+LN KL + R E + N+ Y F GGL +V
Sbjct: 177 EEIFETS-QFNHETLAKRFEELAYLNRKLELDFRDERT----NERVTYRFDGGLNRFVTD 231
Query: 310 LNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
LN ++ +H+++ + +++GI +D ALQ+ ++ Y + +L +AN+IRT +GGTH++G K +
Sbjct: 232 LNAGEQVIHEIIEGQGEIEGIMVDFALQYNAN-YKEEVLTFANNIRTREGGTHLQGFKTA 290
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
LTR +N+ +K+ K L+G+ VREGLT +ISV++P P+FEGQTKT+LGN EV +
Sbjct: 291 LTRAINTYIEKADIPKKFKQKLTGDDVREGLTAVISVKLPQPQFEGQTKTKLGNSEVAGL 350
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
V + V E + + E +P SI+ K++ A +A AA++A++LVR+K L SLPGKLA
Sbjct: 351 VAKIVFEAVNVHFEENPKDAKSIVEKAVDAARAREAARKAKELVRRKGALSDHSLPGKLA 410
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
DC S PEESE+FIVEGDSAGGSAKQGRD RFQ I+ PL+ I
Sbjct: 411 DCQSKKPEESELFIVEGDSAGGSAKQGRDPRFQAIL-PLRGKIL 453
>gi|435853738|ref|YP_007315057.1| DNA gyrase, B subunit [Halobacteroides halobius DSM 5150]
gi|433670149|gb|AGB40964.1| DNA gyrase, B subunit [Halobacteroides halobius DSM 5150]
Length = 636
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 231/463 (49%), Positives = 320/463 (69%), Gaps = 13/463 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V K Y +EQIQVLEGLEAVRKRP MYIGSTG +GLHHL++E++DN++DE AGY IE+
Sbjct: 3 VDKKYNAEQIQVLEGLEAVRKRPGMYIGSTGTKGLHHLIWEVVDNSIDEFLAGYGDKIEI 62
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L +D V V D GRGIP+D+HP A + VLT LHAGGKF G SGY VSGGLHGVG
Sbjct: 63 TLQSDQVVKVRDYGRGIPVDIHPKKGLPAAQLVLTTLHAGGKFDG--SGYKVSGGLHGVG 120
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE L++ ++R+G YHQKY RG PVT + + GT I F PD ++
Sbjct: 121 VSVVNALSEWLKIKIYRNGAVYHQKYERGYPVTEFEKQ----GTTSKTGTEIAFKPDAEI 176
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F T ++F +T+ R++E AFLN L + L+ D EK++ +Y + GGLE +++ LN
Sbjct: 177 FDT-LEFKFDTLKNRLQESAFLNKNLNLILK--DRRKEKDKEVKYCYDGGLEAFIKHLNK 233
Query: 313 DKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
K PL D+V ++VD +++A Q+ + Y++ + +AN+I T DGG H+ G K ++T
Sbjct: 234 SKTPLVDDIVYVEREVDDTYVEIAFQY-NKGYNERIYSFANNINTHDGGYHLTGFKTAIT 292
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
+ LN ++ + D L+G +REGLT +ISV++ +P+FEGQTKT+LGN E+R V
Sbjct: 293 KALNKYAEEKNVLNKTDPKLTGRDLREGLTAVISVKLTDPQFEGQTKTKLGNSEIRTTVQ 352
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQ-KSVLRSSSLPGKLAD 490
V +YL YLE +P + ++++K+L A++A A+K+AR+L R+ K L S+SLPGKLAD
Sbjct: 353 HVVSDYLPSYLERNPKLAKAVINKALEAVRARKASKKARELARKRKGPLSSNSLPGKLAD 412
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
CSS TPEE E+++VEGDSAGGSAKQGR+R FQ ++ PL+ I
Sbjct: 413 CSSRTPEECELYLVEGDSAGGSAKQGRNRNFQAVL-PLKGKIM 454
>gi|312134087|ref|YP_004001425.1| DNA gyrase subunit B [Caldicellulosiruptor owensensis OL]
gi|311774138|gb|ADQ03625.1| DNA gyrase, B subunit [Caldicellulosiruptor owensensis OL]
Length = 637
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 240/463 (51%), Positives = 322/463 (69%), Gaps = 20/463 (4%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
N ++ Y + +IQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DNA+DEA AG+ NI
Sbjct: 5 NNSTQEYSASEIQVLEGLEAVRKRPGMYIGSTSQRGLHHLVYEIVDNAIDEAMAGFCKNI 64
Query: 131 EVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 190
EV + NSV+V D+GRGIP+D+HP KS +E V TVLHAGGKF + Y VSGGLHG
Sbjct: 65 EVVIHKGNSVTVIDDGRGIPVDIHPKLGKSGVEVVFTVLHAGGKF--NERVYKVSGGLHG 122
Query: 191 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 250
VG SVVNALS LEV V+RDG Y+Q+Y RG+P TC + + + D+ GT++ F PD
Sbjct: 123 VGASVVNALSRYLEVEVYRDGKIYYQRYERGRP----TCELKVIGTTDKTGTKVTFLPDD 178
Query: 251 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYV 307
++F T I+FD + I R+RELAFLN + I R+++ P + +Y+ GG+ E+V
Sbjct: 179 EIFET-IEFDGDVILQRLRELAFLNKGIRIVFLDEREKNPKPVELKYD-----GGIAEFV 232
Query: 308 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 366
++LN +K+ LH + + + + I I++A+Q+ D + + + +AN+I TIDGGTH+ G
Sbjct: 233 KFLNRNKEVLHQEPIYIEGEKNDILIEVAMQYTDD-FGENIYSFANNIATIDGGTHLIGF 291
Query: 367 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 426
K ++T+ +N KK K D L GE +R+G+T I+SV++ P+FEGQTKT+LGN E
Sbjct: 292 KTAVTKAVNEYAKKYNLTKG-DTQLLGEDIRDGMTAIVSVKIHEPQFEGQTKTKLGNSEA 350
Query: 427 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLV-RQKSVLRSSSLP 485
R V+ V E L +LE +PDV I+ K++ A KA AK+AR+LV ++KS L SS+LP
Sbjct: 351 RWAVENLVSEKLAAFLEENPDVSKKIIDKAILAAKAREEAKKARELVIKRKSALDSSNLP 410
Query: 486 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPL 528
GKLADCS P + EIFIVEGDSAGGSAKQGRDRR+Q I+ PL
Sbjct: 411 GKLADCSEKDPAKCEIFIVEGDSAGGSAKQGRDRRYQAIL-PL 452
>gi|433590818|ref|YP_007280314.1| DNA gyrase, B subunit [Natrinema pellirubrum DSM 15624]
gi|448331776|ref|ZP_21521027.1| DNA gyrase subunit B [Natrinema pellirubrum DSM 15624]
gi|433305598|gb|AGB31410.1| DNA gyrase, B subunit [Natrinema pellirubrum DSM 15624]
gi|445628735|gb|ELY82038.1| DNA gyrase subunit B [Natrinema pellirubrum DSM 15624]
Length = 643
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 233/460 (50%), Positives = 322/460 (70%), Gaps = 9/460 (1%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +I V++
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVSIHE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSVAD+GRGIP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVADDGRGIPVDTHEEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LE V RDG + + G+PV + V ++S + GT+I+FWPD +F T
Sbjct: 125 NALSERLEAEVKRDGGVFRHAFEGGEPVGDME-RVRDMESDEETGTQIQFWPDTGIFETG 183
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALR--KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
+ +T++ R+RELAFLN + I LR +E++D Y + GG+ E+V++LN +
Sbjct: 184 -EMSFSTLSNRLRELAFLNSGVRITLRDEREETDDGDVVSETYEYDGGIREFVEYLNETR 242
Query: 315 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+H DV+ F + I I++A+Q + ++ +AN+I T +GGTH+ G K +LTRT
Sbjct: 243 SAMHEDVIYFEDEEQSIQIEVAMQ-ATQELQGSIHAFANNINTREGGTHLTGFKTALTRT 301
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N ++ + D D +L+GE +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ +
Sbjct: 302 VNDYANENDLLSDLDNNLTGEDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESA 361
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
+ E L Y E HPD +SI++K++ A KA +AA++A +L R+KS L S+SLPGKLADC +
Sbjct: 362 MHEGLGTYFEEHPDTAESIVNKAVEAAKARMAAQKAEELTRRKSALESTSLPGKLADCQT 421
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
PEE+E+FI EGDSAGGSAKQ R+ Q I+ P++ I
Sbjct: 422 KDPEEAELFIAEGDSAGGSAKQARNPDLQAIL-PIKGKIL 460
>gi|220932011|ref|YP_002508919.1| DNA gyrase subunit B [Halothermothrix orenii H 168]
gi|219993321|gb|ACL69924.1| DNA gyrase, B subunit [Halothermothrix orenii H 168]
Length = 637
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/463 (48%), Positives = 332/463 (71%), Gaps = 12/463 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+EQI++L+GLEAVRKRP MYIGSTG RGLHHLV+E++DN++DE AGY IEV +
Sbjct: 9 YGAEQIEILKGLEAVRKRPGMYIGSTGIRGLHHLVWEVVDNSIDEYLAGYGDKIEVTINE 68
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNS++V D GRGIP + HP T A + V+T LHAGGKF +S Y VSGGLHGVG+SVV
Sbjct: 69 DNSITVEDWGRGIPAEEHPETGLPAAQVVMTTLHAGGKFNNNS--YKVSGGLHGVGISVV 126
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LE+T + +G EY+Q+Y RG P T + + +R GT I F PD ++F
Sbjct: 127 NALSEWLELTTYWNGNEYYQRYERGYPKTKFQ----KLGTSNRNGTIISFKPDPEIFDVT 182
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+F + T+A R++E AFLN +L++ L + SD K + +Y GG++ +V++LN +++
Sbjct: 183 -EFKYETLAHRLQESAFLNKELSLILIDKRSDKTKKEVFQY--DGGIKAFVEYLNKNRQV 239
Query: 317 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
++ D++ K+ I++ALQ+ ++ Y++ + YAN+I T+DGG H+ G K +LT+ +N
Sbjct: 240 INEDIIYTEKENGDYYIEVALQY-NEGYNERIFSYANNINTVDGGYHLTGFKTALTKAIN 298
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+ K++ +K D +L+G VREGLT +++V++PNP+FEGQTK++LGN E+R +V+ ++
Sbjct: 299 NFAKQNNLLKQSDPTLTGNDVREGLTAVVNVKLPNPQFEGQTKSKLGNSEIRSIVESNIY 358
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
+YL+ YL+ +P+V I+ K++ A++A A+K+AR+L R+K+ L S SLPGKLADC+S
Sbjct: 359 DYLSLYLDSNPEVGKKIVDKAIQAIRARQASKKARELTRRKNALNSHSLPGKLADCASRK 418
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PE+SE+F+VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 419 PEKSELFLVEGDSAGGSAKQGRNRHFQAIL-PLKGKIMNVERA 460
>gi|448576111|ref|ZP_21642154.1| DNA gyrase subunit B [Haloferax larsenii JCM 13917]
gi|445729791|gb|ELZ81385.1| DNA gyrase subunit B [Haloferax larsenii JCM 13917]
Length = 639
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 241/459 (52%), Positives = 319/459 (69%), Gaps = 11/459 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY IEV L
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGYCDAIEVTLHE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSVADNGRGIP+D H N+ A+E ++TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVADNGRGIPVDTHEQYNRPAVEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS LEV + RDG +H ++ +G+PV V ++ + GT I FWPD ++F T
Sbjct: 125 NALSTELEVEIMRDGAVWHHRFEKGEPVQGAFEKVRDMEPDEETGTTITFWPDGEIFETT 184
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
F T+ R+RELAFLN + I+L E S+ + + + F GG+ E+V++LN K
Sbjct: 185 -DFTFKTLETRLRELAFLNSGVEISLTDERSE----ESSTFMFEGGIREFVEYLNETKTA 239
Query: 317 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LH DV+ + + +GI +++ALQ +D ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 240 LHEDVIYYEDETEGIAVEVALQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVN 298
Query: 376 SLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
+ D D +L GE VREGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ +
Sbjct: 299 DYANSEGMLSDLDGDNLRGEDVREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESTT 358
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E L Y E +PD+ +I+SK++ A +A AAK+A +L R+KS L S++LPGKLADC S
Sbjct: 359 HEKLGTYFEENPDMAKAIISKAVEAARARKAAKKAEELTRRKSALESTALPGKLADCQSR 418
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P +SE+F+VEGDSAGGSAKQGRDR FQ I+ P++ I
Sbjct: 419 DPSKSELFVVEGDSAGGSAKQGRDREFQAIL-PIKGKIL 456
>gi|217076995|ref|YP_002334711.1| DNA gyrase B subunit [Thermosipho africanus TCF52B]
gi|419759567|ref|ZP_14285861.1| DNA gyrase subunit B [Thermosipho africanus H17ap60334]
gi|217036848|gb|ACJ75370.1| DNA gyrase, B subunit [Thermosipho africanus TCF52B]
gi|407515387|gb|EKF50145.1| DNA gyrase subunit B [Thermosipho africanus H17ap60334]
Length = 627
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 238/458 (51%), Positives = 321/458 (70%), Gaps = 16/458 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ I+VL+GLE VR+RP MYIGSTG GLHHLVYEI+DN++DE+ GY I+V +
Sbjct: 3 YSAQNIKVLKGLEPVRQRPGMYIGSTGKAGLHHLVYEIVDNSIDESLQGYCDTIKVTIFK 62
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV V DNGRGIP+D+HP T KSALE V+T LHAGGKF S Y VSGGLHGVG SVV
Sbjct: 63 DGSVEVEDNGRGIPVDIHPETGKSALEVVMTTLHAGGKF--SKDSYKVSGGLHGVGASVV 120
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS+ LEV V RDG Y+Q+Y RG P TC V + +++GT +RF PD +F+T
Sbjct: 121 NALSQWLEVEVHRDGKVYYQRYERGTP----TCEVKIIGETEKRGTTVRFKPDPLIFSTT 176
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
FD +TI R+RELAFLNP +TI + E ++ E+ + + GG++E+V L+ K
Sbjct: 177 -DFDTDTILMRLRELAFLNPNITIYFKDERNNTERT----FHYTGGIKEFVSHLSKGSKS 231
Query: 317 LHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNS 376
LH+ V + + I ++++ Q+ +D+ + + + N+IRT+DGGTH+ G K++ TR +N
Sbjct: 232 LHEPVYISGEYEKIKVEVSFQY-TDSDFEKIYSFVNNIRTVDGGTHVTGFKSAFTRVVNE 290
Query: 377 LGKKSKTVKDKDISLSGEHVREGLTCIISVRVPN-PEFEGQTKTRLGNPEVRKVVDQSVQ 435
LG+K+ +K KD SL G+ VREG+ +ISV + + PEFEGQTK++LGN EV++ V + V+
Sbjct: 291 LGRKTGQLK-KD-SLRGDDVREGMVAVISVLMSSTPEFEGQTKSKLGNEEVQEAVAKVVR 348
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L E+ E + + L I+ K+L A KA AAK AR++V++KSV SSSLPGKLADC +
Sbjct: 349 EKLLEFFETNENTLKIIIQKALEAKKAREAAKHAREMVKRKSVFGSSSLPGKLADCITKK 408
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
EESE+FIVEGDSAGGSAKQ RDR FQ I+ PL+ I
Sbjct: 409 LEESELFIVEGDSAGGSAKQARDRNFQAIL-PLRGKIL 445
>gi|448385291|ref|ZP_21563797.1| DNA gyrase subunit B [Haloterrigena thermotolerans DSM 11522]
gi|445656786|gb|ELZ09618.1| DNA gyrase subunit B [Haloterrigena thermotolerans DSM 11522]
Length = 643
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/460 (50%), Positives = 322/460 (70%), Gaps = 9/460 (1%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +I V++
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVSIHE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSVAD+GRGIP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVADDGRGIPVDTHEEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LE V RDG + + G+PV + V ++ + GT+I+FWPD +F T
Sbjct: 125 NALSERLEAEVKRDGGVFRHAFEGGEPVGDME-RVRDMEPDEETGTQIQFWPDTGIFETG 183
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALR--KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
+ +T++ R+RELAFLN + I LR +E++D Y + GG+ E+V++LN +
Sbjct: 184 -EMSFSTLSNRLRELAFLNSGVRITLRDEREETDDGDVVTETYEYDGGIREFVEYLNETR 242
Query: 315 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+H DV+ F + I I++A+Q ++ ++ +AN+I T +GGTH+ G K +LTR
Sbjct: 243 SAMHEDVIYFEDEEQSIQIEVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTRC 301
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N ++ + D D +L+GE +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ +
Sbjct: 302 VNDYANENDLLSDLDNNLTGEDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESA 361
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
+ E L Y E HPD +SI++K++ A KA +AA++A +L R+KS L S+SLPGKLADC +
Sbjct: 362 MHEGLGTYFEEHPDTAESIVNKAVEAAKARMAAQKAEELTRRKSALESTSLPGKLADCQT 421
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
PEE+E+FI EGDSAGGSAKQ R+ FQ I+ P++ I
Sbjct: 422 KDPEEAELFIAEGDSAGGSAKQARNPDFQAIL-PIKGKIL 460
>gi|15893304|ref|NP_346653.1| DNA gyrase subunit B [Clostridium acetobutylicum ATCC 824]
gi|337735215|ref|YP_004634662.1| DNA gyrase subunit B [Clostridium acetobutylicum DSM 1731]
gi|384456724|ref|YP_005669144.1| DNA gyrase subunit B [Clostridium acetobutylicum EA 2018]
gi|18273027|sp|P94604.2|GYRB_CLOAB RecName: Full=DNA gyrase subunit B
gi|15022823|gb|AAK77993.1|AE007513_6 DNA gyrase (topoisomerase II) B subunit [Clostridium acetobutylicum
ATCC 824]
gi|325507413|gb|ADZ19049.1| DNA gyrase subunit B [Clostridium acetobutylicum EA 2018]
gi|336292832|gb|AEI33966.1| DNA gyrase subunit B [Clostridium acetobutylicum DSM 1731]
Length = 637
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/463 (51%), Positives = 325/463 (70%), Gaps = 17/463 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y QIQVLEGLEAVRKRP MYIGSTG RGLHHLVYEI+DN++DEA AGY S+I+V
Sbjct: 5 NEIYDESQIQVLEGLEAVRKRPGMYIGSTGTRGLHHLVYEIVDNSIDEALAGYCSHIKVF 64
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNSV+V+D+GRG+PI +H K +E ++T+LHAGGKFGG + Y VSGGLHGVG
Sbjct: 65 IHKDNSVTVSDDGRGMPIGIHHKMKKPTVEVIMTILHAGGKFGGGA--YRVSGGLHGVGA 122
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE+ EV V +G + Q Y RGK + + D GT+I F PD ++F
Sbjct: 123 SVVNALSETCEVEVKTEGHIWKQTYHRGKVASPFE----KIGDSDEHGTKIYFKPDPEIF 178
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNT 312
++D++T++ R+RELAFLN + I L E D NE F + GGL+ +V +LN
Sbjct: 179 EDT-EYDYDTLSQRLRELAFLNKGIKIELTDERHDK-----NEIFHYEGGLKSFVSYLNR 232
Query: 313 DKKPL-HDVVGFRKDVD-GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 370
+K+ + + + +D ++++ALQ+ +D Y++ + +AN+I TI+GGTH+ G K +L
Sbjct: 233 NKEVVFKEPIYVEGSIDSNYSVEIALQY-NDGYNENIFSFANNIHTIEGGTHLAGFKTAL 291
Query: 371 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
TR +N KK +K+ D +LSGE +REGLT ++SV++ P+FEGQTKT+LGN EVR +V
Sbjct: 292 TRVINDYAKKFGYLKENDKNLSGEDIREGLTAVVSVKLTEPQFEGQTKTKLGNTEVRGIV 351
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
D + E ++ YLE +P + ++ K+L A +A AAK+AR++ R+KSVL S+SLPGKLAD
Sbjct: 352 DSIISERVSTYLEENPQIGKLVIDKALVASRAREAAKKAREITRRKSVLESTSLPGKLAD 411
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
CSS EE EI+IVEGDSAGGSAKQGR+RRFQ I+ PL+ I
Sbjct: 412 CSSKDAEECEIYIVEGDSAGGSAKQGRNRRFQAIL-PLRGKIM 453
>gi|256826465|ref|YP_003150424.1| DNA gyrase subunit B [Cryptobacterium curtum DSM 15641]
gi|256582608|gb|ACU93742.1| DNA gyrase subunit B [Cryptobacterium curtum DSM 15641]
Length = 645
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 238/465 (51%), Positives = 327/465 (70%), Gaps = 10/465 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLE VRKRP MYIGST RGLHHLVYE++DN+VDEA AGY ++I+V +
Sbjct: 9 YDGKDIQVLEGLEPVRKRPGMYIGSTSERGLHHLVYEVVDNSVDEALAGYCTDIQVWICD 68
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D S+ V DNGRGIP+D HP + +E VLT+LHAGGKFGG GY VSGGLHGVG+SVV
Sbjct: 69 DGSIKVQDNGRGIPVDKHPKEHIPTVEVVLTILHAGGKFGGE--GYKVSGGLHGVGVSVV 126
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS ++V V RDG Y +SRGK V L HV+ DSK GT +RFWPD ++FT
Sbjct: 127 NALSTQMKVQVCRDGKRYEITFSRGKTVEKL--HVVG-DSK-HTGTTVRFWPDPEIFTET 182
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKE-DSDPEKNQYNEYF-FAGGLEEYVQWLNTDK 314
F++NT+A R RE+AFLN L I L E + D E +E F F G++++V++L T K
Sbjct: 183 TVFNYNTLAERFREMAFLNKGLKITLYDERELDGEGVAKHETFQFQDGIKDFVKFLTTGK 242
Query: 315 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+ L+ + F + +++A+QW S ++++ +AN+I TI+GGTH++G K ++TRT
Sbjct: 243 EVLNTKPIYFEAEGPAGEVEVAMQWTSSFSTNSVFSFANNINTIEGGTHLDGFKQAVTRT 302
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N ++ +K+KD +L+G+ REGL+ +ISV++ +P+FEGQTKT+LGN E+R++V +
Sbjct: 303 INDYAREKGILKEKDSNLTGDDCREGLSAVISVKLHDPQFEGQTKTKLGNSEMRQLVSSA 362
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
V + L EYLE +P I++K+ ALKA AA++AR++ R+K+VL S +LPGKLADCSS
Sbjct: 363 VNQGLGEYLEENPTPAKRIINKASQALKAREAARKAREMTRRKNVLDSFALPGKLADCSS 422
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
+ E+FIVEGDSAGGSAKQ RDR++Q I+ PL+ I A
Sbjct: 423 KNAADCEMFIVEGDSAGGSAKQARDRKYQAIL-PLRGKILNVERA 466
>gi|451980308|ref|ZP_21928704.1| DNA gyrase subunit B [Nitrospina gracilis 3/211]
gi|451762478|emb|CCQ89935.1| DNA gyrase subunit B [Nitrospina gracilis 3/211]
Length = 867
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 233/470 (49%), Positives = 323/470 (68%), Gaps = 14/470 (2%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E P Y S I+VLEGLEAVRKRPAMYIG TG GLHHL+YE++DN+VDEA AGY +
Sbjct: 2 ETPQKAVYDSSNIKVLEGLEAVRKRPAMYIGGTGQDGLHHLIYELVDNSVDEAIAGYCTE 61
Query: 130 IEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 189
+EV L D+SV+V+DNGRGIP+D H N SA E V+T LHAGGKF + Y VS GLH
Sbjct: 62 VEVQLHVDSSVTVSDNGRGIPVDHHKGKNMSAAEVVMTTLHAGGKFDKDT--YKVSAGLH 119
Query: 190 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 249
GVG+SVVNAL+E+L++ + RD Y Q+Y RGKPVT+L V GT+I F PD
Sbjct: 120 GVGVSVVNALAETLQLEIKRDNKIYQQQYERGKPVTSLQ----EVGQTTTTGTKIDFRPD 175
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 309
++F F + ++ R+REL++LN L I + D + +++FF GG++ ++
Sbjct: 176 PEIFPDT-NFSFDILSNRLRELSYLNKGLRIKIH----DERDGRSHDFFFEGGIQSFIDH 230
Query: 310 LNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
LN +KK LH + ++ D + ++L++Q+ +D+Y++ + + N++ T DGGTH+ G ++
Sbjct: 231 LNKNKKTLHPKPIYIERERDNMYLELSMQY-NDSYAEEIFTFVNNVNTKDGGTHLSGFRS 289
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
+LTRT+NS ++ +K +SL+GE VREGL +ISV++P+P+FEGQTK RLGN +V+
Sbjct: 290 ALTRTINSYATQNNLLKTAGVSLTGEDVREGLVAVISVKIPDPQFEGQTKGRLGNSDVKG 349
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
V+Q V E L + E P V SI+ K++SA +A AAK+A+DLVR+KS L SSLPGKL
Sbjct: 350 QVEQIVNEKLGQIFEEEPAVARSIVGKAISAAQAREAAKKAKDLVRRKSALEISSLPGKL 409
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
ADC+ P ESE++IVEGDSAGGSAKQGR+R+FQ I+ PL+ I A
Sbjct: 410 ADCAEKDPAESELYIVEGDSAGGSAKQGRNRKFQAIL-PLKGKILNVEKA 458
>gi|257054095|ref|YP_003131927.1| DNA gyrase subunit B [Saccharomonospora viridis DSM 43017]
gi|256583967|gb|ACU95100.1| DNA gyrase subunit B [Saccharomonospora viridis DSM 43017]
Length = 654
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 231/473 (48%), Positives = 323/473 (68%), Gaps = 21/473 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + I VLEGLEAVRKRP MYIGSTG RGLHHL+ E++DN+VDEA AGYAS +EV LLA
Sbjct: 8 YSASSITVLEGLEAVRKRPGMYIGSTGVRGLHHLIQEVVDNSVDEAMAGYASRVEVTLLA 67
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D V V D+GRGIP++ HP K +E VLT LHAGGKF S Y+VSGGLHGVG+SVV
Sbjct: 68 DGGVRVVDDGRGIPVEPHPVHGKPTVEIVLTQLHAGGKF--DSDSYAVSGGLHGVGVSVV 125
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS +LEV + RDG + Q+Y P ++ DR GT + FW D ++F T
Sbjct: 126 NALSSALEVEIHRDGRIWAQRYENSVP-----GELVDKGPTDRSGTSVTFWADPEIFETT 180
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKE--------DSDPEKNQYNE--YFFAGGLEEY 306
+++ T+A R++E+AFLN LT+ LR E D+ E+ Q E Y++ GGLE++
Sbjct: 181 -EYNAETVARRLQEMAFLNKGLTMILRDERVTDEEGEDATGERAQLKERTYYYPGGLEDF 239
Query: 307 VQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 365
V+++N ++ +H V+ F + DG+ +++A+QW +D Y+ ++ +AN+I T +GGTH EG
Sbjct: 240 VKYINASREAIHPSVISFEQKGDGLEVEVAMQW-NDGYTPSVYTFANTINTHEGGTHEEG 298
Query: 366 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 425
+A+LTR +N+ + K +K+KD +L+G+ VREGL I+S+++ P+FEGQTKT+LGN E
Sbjct: 299 FRAALTRVVNAYARDKKLLKEKDANLTGDDVREGLAAIVSIKLTEPQFEGQTKTKLGNSE 358
Query: 426 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 485
R V + E+L ++ E +P I++K++S+ +A LAA++ARDLVR+K + LP
Sbjct: 359 ARSFVQTACNEWLADWFERNPTEAKLIINKAVSSAQARLAARKARDLVRRKGAMDIGGLP 418
Query: 486 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
GKL DC S PEE E++IVEGDSAGGSAK+GRD RFQ I+ P++ I A
Sbjct: 419 GKLKDCRSNDPEECELYIVEGDSAGGSAKEGRDSRFQAIL-PIRGKIINVEKA 470
>gi|302035397|ref|YP_003795719.1| DNA gyrase subunit B [Candidatus Nitrospira defluvii]
gi|300603461|emb|CBK39791.1| DNA gyrase, subunit B [Candidatus Nitrospira defluvii]
Length = 824
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 241/467 (51%), Positives = 320/467 (68%), Gaps = 13/467 (2%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
P S +Y ++QI+VLEGL+AVRKRPAMYIGSTG GLHHLVYE++DN+VDE AG+ IE
Sbjct: 13 PKSDSYSADQIKVLEGLDAVRKRPAMYIGSTGVDGLHHLVYEVVDNSVDEHMAGFGEAIE 72
Query: 132 VALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 191
V + D SV+V DNGRGIP +H KSA E LTVLHAGGKF Y+VSGGLHGV
Sbjct: 73 VTIHIDGSVTVVDNGRGIPTGMHSTQKKSAAEVALTVLHAGGKF--EQGAYTVSGGLHGV 130
Query: 192 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 251
G+SVVNALSE LE+ +W+DG + Q+Y RGKP L R+GT++RF PD Q
Sbjct: 131 GISVVNALSEWLELEIWQDGQVFEQRYERGKPQAPLAV----TGKTKRRGTKVRFKPDGQ 186
Query: 252 VFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLN 311
+F T ++F + +A R+RELAFLN L+I L+ D EK Q + + GG+ +V LN
Sbjct: 187 IFET-LEFSFDVLAQRLRELAFLNKGLSITLK--DDRKEKEQV--FHYKGGIVSFVDHLN 241
Query: 312 TDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
K PLH + + + + +++ALQ+ +D Y++ + +AN+I T +GGTH+ G KA+LT
Sbjct: 242 EAKTPLHKPIYVQTERADLILEVALQY-NDGYAENLFSFANNINTKEGGTHLVGFKAALT 300
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RT+NS + +K SLSG+ VREGLT ++SV+V NP+FEGQTK +LGN EV+ +V+
Sbjct: 301 RTINSYANANDLLKKDTESLSGDDVREGLTAVVSVKVRNPQFEGQTKAKLGNSEVKGIVE 360
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+V + L Y E +P V I+ K++ A +A AA++A+DL+R+KS L SLPGKLADC
Sbjct: 361 AAVNDALGTYFEENPPVARKIIGKAIDAARAREAARKAKDLIRRKSALDGGSLPGKLADC 420
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P SE+FIVEGDSAGGSAKQGRDR+FQ I+ PL+ I A
Sbjct: 421 SEKDPALSELFIVEGDSAGGSAKQGRDRKFQAIL-PLKGKILNVEKA 466
>gi|1790875|gb|AAB41130.1| DNA gyrase subunit B [Clostridium acetobutylicum ATCC 824]
Length = 637
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 236/463 (50%), Positives = 325/463 (70%), Gaps = 17/463 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y QIQVLEGLEAVRKRP MYIG+TG RGLHHLVYEI+DN++DEA AGY S+I+V
Sbjct: 5 NEIYDESQIQVLEGLEAVRKRPGMYIGTTGTRGLHHLVYEIVDNSIDEALAGYCSHIKVF 64
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNSV+V+D+GRG+PI +H K +E ++T+LHAGGKFGG + Y VSGGLHGVG
Sbjct: 65 IHKDNSVTVSDDGRGMPIGIHHKMKKPTVEVIMTILHAGGKFGGGA--YRVSGGLHGVGA 122
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE+ EV V +G + Q Y RGK + + D GT+I F PD ++F
Sbjct: 123 SVVNALSETCEVEVKTEGHIWKQTYHRGKVASPFE----KIGDSDEHGTKIYFKPDPEIF 178
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNT 312
++D++T++ R+RELAFLN + I L E D NE F + GGL+ +V +LN
Sbjct: 179 EDT-EYDYDTLSQRLRELAFLNKGIKIELTDERHDK-----NEIFHYEGGLKSFVSYLNR 232
Query: 313 DKKPL-HDVVGFRKDVD-GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 370
+K+ + + + +D ++++ALQ+ +D Y++ + +AN+I TI+GGTH+ G K +L
Sbjct: 233 NKEVVFKEPIYVEGSIDSNYSVEIALQY-NDGYNENIFSFANNIHTIEGGTHLAGFKTAL 291
Query: 371 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
TR +N KK +K+ D +LSGE +REGLT ++SV++ P+FEGQTKT+LGN EVR +V
Sbjct: 292 TRVINDYAKKFGYLKENDKNLSGEDIREGLTAVVSVKLTEPQFEGQTKTKLGNTEVRGIV 351
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
D + E ++ YLE +P + ++ K+L A +A AAK+AR++ R+KSVL S+SLPGKLAD
Sbjct: 352 DSIISERVSTYLEENPQIGKLVIDKALVASRAREAAKKAREITRRKSVLESTSLPGKLAD 411
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
CSS EE EI+IVEGDSAGGSAKQGR+RRFQ I+ PL+ I
Sbjct: 412 CSSKDAEECEIYIVEGDSAGGSAKQGRNRRFQAIL-PLRGKIM 453
>gi|383786730|ref|YP_005471299.1| DNA gyrase subunit B [Fervidobacterium pennivorans DSM 9078]
gi|383109577|gb|AFG35180.1| DNA gyrase, B subunit [Fervidobacterium pennivorans DSM 9078]
Length = 641
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 235/462 (50%), Positives = 320/462 (69%), Gaps = 16/462 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ Y ++ I+VL+GLE VR+RP MYIGSTG GLHHLVYEI+DN++DEA GY I+V
Sbjct: 10 MTNQYTAQNIKVLKGLEPVRERPGMYIGSTGKTGLHHLVYEIVDNSIDEAIQGYCDKIKV 69
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ AD SV V DNGRGIP+D+HP T SALE V+T LHAGGKF S Y VSGGLHGVG
Sbjct: 70 TIKADGSVEVEDNGRGIPVDIHPETGTSALEVVMTTLHAGGKF--SKESYKVSGGLHGVG 127
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
SVVNALSE +EV V RDG Y Q+Y+RG+ VT + + ++GT +RF PDK +
Sbjct: 128 ASVVNALSEWMEVEVHRDGKIYRQRYARGQKVTEVEV----IGETTKRGTIVRFKPDKTI 183
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FTT ++FD +TI R+R+LAFLNP +TI E D N + ++GGL+E+V +LN
Sbjct: 184 FTT-VEFDSDTILTRLRDLAFLNPNVTI----EFIDERNNIHRTLHYSGGLKEFVSYLNR 238
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
+K LH+VV V + + +A Q+ +D+ ++ ++ + N+I+T+DGGTH+ G K + TR
Sbjct: 239 GEKTLHEVVYIEGSVQDVQVQVAFQY-TDSDTEEIISFVNNIKTVDGGTHVTGFKTAFTR 297
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISV-RVPNPEFEGQTKTRLGNPEVRKVVD 431
+N LGKK +K + GE +REG+T +I+V + P+FEGQTK++LGN EV+ V
Sbjct: 298 VVNELGKKKNMIKGE--PFRGEDLREGMTAVIAVLMMGTPQFEGQTKSKLGNEEVQDAVA 355
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+ V++ LT+Y E++ VL I+ K+ +A AAKRAR+ V++KS L +S+LPGKLADC
Sbjct: 356 KVVRDKLTDYFEVNESVLKVIIQKAQQTREAREAAKRAREAVKRKSSLGASTLPGKLADC 415
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
+ EESE+FIVEGDSAGGSAKQ RDR FQ I+ PL+ I
Sbjct: 416 ITKNLEESELFIVEGDSAGGSAKQARDRNFQAIL-PLRGKIL 456
>gi|91772465|ref|YP_565157.1| DNA gyrase subunit B [Methanococcoides burtonii DSM 6242]
gi|91711480|gb|ABE51407.1| DNA gyrase subunit B [Methanococcoides burtonii DSM 6242]
Length = 632
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 238/467 (50%), Positives = 319/467 (68%), Gaps = 13/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+S Y + IQVLEGLEAVRKRP+MYIGS RGLHHLVYE++DN++DEA AG+ NI+V
Sbjct: 1 MSDDYDATHIQVLEGLEAVRKRPSMYIGSVDTRGLHHLVYEVVDNSIDEALAGFCKNIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
++ AD SV+V D+GRGIP+D HP KSALE VLTVLHAGGKF S Y VSGGLHGVG
Sbjct: 61 SINADGSVTVVDDGRGIPVDNHPKYKKSALEVVLTVLHAGGKF--DKSNYKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EV V RDG Y+Q+Y RG P + +T + GT+ F PD Q+
Sbjct: 119 VSVVNALSEWMEVEVKRDGKLYYQRYERGAPTSDVTV----IGDAKGTGTKSTFMPDSQI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F T +F + T+ R+RELAFLN + I + DS E+ + + + + GG+ +V+ LN
Sbjct: 175 FETT-EFSYGTLITRLRELAFLNKGIRITIT--DSREEELEQDVFEYEGGIISFVEHLNQ 231
Query: 313 DKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+ LH + F ++ +G +++A+Q+ +D+Y + + +AN+I T +GGTH+ G K +LT
Sbjct: 232 SRTALHKTPIYFEREKEGTIVEIAMQY-TDSYGEYVYSFANNINTYEGGTHLIGFKTALT 290
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R N KK+ VK D L+GE +REGL IISV++ P+FEGQTKT+LGN E++ +VD
Sbjct: 291 RVANDYIKKNNVVKG-DEKLTGEDIREGLAAIISVKLTEPQFEGQTKTKLGNSELKGIVD 349
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E L+EY+E +P V I K+L A +A AAK+AR+L R+KS L +LPGKLADC
Sbjct: 350 SMVSEGLSEYMEENPKVAVIIFQKALDARRAREAAKKARELTRRKSALEIGTLPGKLADC 409
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P SE+++VEGDSAGGSAKQGR+RRFQ I+ P + I A
Sbjct: 410 SEKDPSVSEVYLVEGDSAGGSAKQGRNRRFQAIL-PFRGKIINVEKA 455
>gi|448591298|ref|ZP_21650899.1| DNA gyrase subunit B [Haloferax elongans ATCC BAA-1513]
gi|445733557|gb|ELZ85124.1| DNA gyrase subunit B [Haloferax elongans ATCC BAA-1513]
Length = 639
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/459 (52%), Positives = 318/459 (69%), Gaps = 11/459 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY IEV L
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGYCDAIEVTLHE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSVADNGRGIP+D H N+ A+E ++TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVADNGRGIPVDTHEQYNRPAVEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS LEV + RDG +H ++ +G+PV V ++ + GT I FWPD ++F T
Sbjct: 125 NALSTELEVEIMRDGAVWHHRFEKGEPVQGAFERVRDMEPDEETGTTITFWPDNEIFETT 184
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
F T+ R+RELAFLN + I+L E S+ + + + F GG+ E+V++L+ K
Sbjct: 185 -DFTFKTLETRLRELAFLNSGVEISLTDERSE----ESSTFMFEGGIREFVEYLDETKTA 239
Query: 317 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LHD ++ + + +GI +++A+Q +D ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 240 LHDDIIYYEDETEGIAVEIAMQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVN 298
Query: 376 SLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
+ D D +L GE VREGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 299 DYANSEGMLSDLDGDNLRGEDVREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESIT 358
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E L Y E +PDV +I+SK++ A +A AAK+A +L R+KS L S++LPGKLADC S
Sbjct: 359 HEKLGTYFEENPDVATAIISKAVEAARARKAAKKAEELTRRKSALESTALPGKLADCQSR 418
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P +SE+F+VEGDSAGGSAKQGRDR FQ I+ P++ I
Sbjct: 419 DPSKSELFVVEGDSAGGSAKQGRDREFQAIL-PIKGKIL 456
>gi|433653751|ref|YP_007297459.1| DNA gyrase, B subunit [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433291940|gb|AGB17762.1| DNA gyrase, B subunit [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 633
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 241/465 (51%), Positives = 326/465 (70%), Gaps = 14/465 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+TYG+ QIQ+LEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AGY NI+V +
Sbjct: 5 ETYGASQIQILEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSIDEALAGYCKNIDVII 64
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DNSVSV D+GRGIP D+HP T KS +E LTVLHAGGKF ++ Y VSGGLHGVGLS
Sbjct: 65 HKDNSVSVIDDGRGIPTDIHPQTGKSGVEVALTVLHAGGKF--NNDVYKVSGGLHGVGLS 122
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS+ LEV V ++G Y QKY RG P + L + D GT IRF PD ++F
Sbjct: 123 VVNALSKRLEVIVKQNGKVYEQKYERGVPKSELKI----IGDTDETGTMIRFKPDDEIFE 178
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
T +++D++ ++ R+REL+FLN + I L E E + + + GG+ E+V++LN +K
Sbjct: 179 T-LEYDYDVLSQRLRELSFLNKGVRIRLMDERDGKE----DVFHYEGGIVEFVKYLNRNK 233
Query: 315 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+ LH + + D +++A+Q+ +D+Y++ + +AN+I T +GGTH+ G KA+LT+
Sbjct: 234 EVLHPEPIYMESKSDTYEVEVAMQY-NDSYTENIFSFANNIDTREGGTHLIGFKAALTKV 292
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N +K +KD D +L GE VREGLT IISV++ NP+FEGQTKT+LGN E+R +VD
Sbjct: 293 INDYARKFNIIKDNDKNLQGEDVREGLTAIISVKLMNPQFEGQTKTKLGNSEMRSIVDSV 352
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
V E LT ++E +P + IL K+ SA +A AA++AR+L R+KS L S+SLPGKLADCS
Sbjct: 353 VTEKLTAFMEENPSLSKVILEKATSAARAREAARKARELTRRKSALESTSLPGKLADCSE 412
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
+ E+++VEGDSAGGSAK GRD R+Q I+ PL+ I A
Sbjct: 413 KDASKCELYLVEGDSAGGSAKMGRDSRYQAIL-PLRGKILNVEKA 456
>gi|402829788|ref|ZP_10878661.1| DNA gyrase, B subunit [Slackia sp. CM382]
gi|402283455|gb|EJU31969.1| DNA gyrase, B subunit [Slackia sp. CM382]
Length = 648
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 236/464 (50%), Positives = 318/464 (68%), Gaps = 9/464 (1%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y IQVLEGL+ VRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AG+ + I+V +
Sbjct: 9 YDGRDIQVLEGLKPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGFCNKIDVTIHE 68
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNSV+V D+GRGIP+D HP +E VLT LHAGGKFGG GY VSGGLHGVG+S V
Sbjct: 69 DNSVTVVDDGRGIPVDKHPKEKIPTVEVVLTKLHAGGKFGGE--GYKVSGGLHGVGVSCV 126
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS +EV V RDG Y + RG VTT + DSK + GT + FWPD ++FT
Sbjct: 127 NALSTRMEVDVCRDGSRYRIVFERG--VTTEKLKRIG-DSK-KTGTTVTFWPDPEIFTDT 182
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKE-DSDPEKNQYNEYF-FAGGLEEYVQWLNTDK 314
+D++ + R RE+AFLN L I + E D D E N + + F +AGG+ ++V++LN K
Sbjct: 183 TVYDYSILQNRFREMAFLNRGLHIEMHDERDLDEEGNPHTDSFQYAGGIVDFVKYLNNGK 242
Query: 315 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+ L+ + F + T+++A+QW + ++ + +AN+I T +GGTH+EG K +LTRT+
Sbjct: 243 ETLNKPIYFEAENKDGTVEIAMQWTTSYSANGVEAFANNINTTEGGTHLEGFKNALTRTI 302
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N + +K+KD +L+G+ REGL+ +ISV++ P+FEGQTKT+LGN E+R +V +V
Sbjct: 303 NDYARAKGLLKEKDSNLTGDDAREGLSAVISVKLHEPQFEGQTKTKLGNTEIRGLVQGAV 362
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
+ L EYLE +P I++K+ ALKA AA++AR++ R+K VL S S+PGKLADCSS
Sbjct: 363 TKGLAEYLEENPTPAKRIVNKASQALKAREAARKAREMTRRKGVLDSFSMPGKLADCSSR 422
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P EIFIVEGDSAGGSAKQ RDR++Q I+ PL+ I A
Sbjct: 423 DPSACEIFIVEGDSAGGSAKQARDRKYQAIL-PLRGKILNVERA 465
>gi|338731010|ref|YP_004660402.1| DNA gyrase subunit B [Thermotoga thermarum DSM 5069]
gi|335365361|gb|AEH51306.1| DNA gyrase subunit B [Thermotoga thermarum DSM 5069]
Length = 630
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/458 (51%), Positives = 312/458 (68%), Gaps = 15/458 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +E IQ+L+GLE VR RP MYIGSTG GLHHLVYEI+DN+VDEA AG+ I+V+L
Sbjct: 4 YTAESIQILKGLEPVRARPGMYIGSTGKSGLHHLVYEIIDNSVDEALAGFCDTIKVSLHE 63
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV V DNGRGIP+D HP T KSALE V+T LHAGGKF S Y VSGGLHGVG SVV
Sbjct: 64 DGSVEVEDNGRGIPVDPHPETGKSALEVVMTTLHAGGKF--SKDAYKVSGGLHGVGASVV 121
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE +EV V RDG+ Y+Q YSRGKP+ C V V +++GT +RF PD ++F+T
Sbjct: 122 NALSEKMEVWVHRDGLIYYQAYSRGKPL----CEVTVVGKTNKRGTIVRFKPDPEIFST- 176
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE-YFFAGGLEEYVQWLNTDKK 315
++FD + I ++RELA+LN L I + + N Y E Y + GG+ EYV++L ++K
Sbjct: 177 VEFDPDIIQTKLRELAYLNVGLKIIF-----EDKINGYTEVYQYKGGISEYVRYLAGNRK 231
Query: 316 PLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LH+V+ + + + +D+A+ + D + YAN+IRT+D GTH+ K ++T+ N
Sbjct: 232 MLHEVIRISGEWEDVKVDVAMVYTDSQEQDLIYSYANTIRTVDHGTHVTAFKNAITKLFN 291
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
K +K KD S GE VREGL ++SV + NPEFEGQTK +LG+ V + V+
Sbjct: 292 EYAKSLGILK-KDESFQGEDVREGLIAVVSVLLKNPEFEGQTKAKLGSEIAGVAVSKVVR 350
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E LTEY E++ L IL + A++A AAK+ARDLVR+K+ L +S+LPGKLADC ST
Sbjct: 351 EKLTEYFEINKATLKIILERIAQAMRAREAAKKARDLVRRKNALENSALPGKLADCVSTD 410
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
E+SE+FIVEGDSAGGSAKQ RDR FQ ++ P++ I
Sbjct: 411 LEKSELFIVEGDSAGGSAKQARDREFQAVL-PIRGKIL 447
>gi|296131558|ref|YP_003638805.1| DNA topoisomerase IV subunit B [Thermincola potens JR]
gi|296030136|gb|ADG80904.1| DNA topoisomerase IV, B subunit [Thermincola potens JR]
Length = 635
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 243/470 (51%), Positives = 324/470 (68%), Gaps = 14/470 (2%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E + YG+ QIQVLEGLEAVR+RP MYIGST RGLHHLVYE++DN++DEA AG+
Sbjct: 2 EQNTNHNYGASQIQVLEGLEAVRRRPGMYIGSTSTRGLHHLVYEVVDNSIDEALAGFCDK 61
Query: 130 IEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 189
IEV + DNS++V DNGRGIP+D+HP K A+E VLT+LHAGGKFGG GY VSGGLH
Sbjct: 62 IEVIIHHDNSITVIDNGRGIPVDIHPKIGKPAVEVVLTILHAGGKFGGD--GYKVSGGLH 119
Query: 190 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 249
GVG+SVVNALSE LEV V RD YHQ+Y RG PVT L + + GT+I F PD
Sbjct: 120 GVGVSVVNALSEWLEVEVKRDNHIYHQRYERGLPVTELKI----IGDSNSTGTKITFKPD 175
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 309
++F + F+ T++ R++EL+FLN LTI L+ E EK +E GG+ ++V+
Sbjct: 176 HEIFEDLV-FNFETLSQRLKELSFLNKGLTIILKDERDGNEKTFQHE----GGIIDFVKH 230
Query: 310 LNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
LN +K LH + + F + D + +++ALQ+ +D Y++ + + N+I T +GGTH G K
Sbjct: 231 LNKNKDVLHPEPIYFEGEKDDVMVEIALQY-NDGYTENIFSFVNNIHTHEGGTHEAGFKT 289
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
+LTR +N +K +K+ + +L+GE +REGLT IISV+V P+FEGQTKT+LGN EVR
Sbjct: 290 ALTRVVNDYARKYNLLKENENNLTGEDIREGLTAIISVKVREPQFEGQTKTKLGNSEVRG 349
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+VD V E + +LE HP I K+++A +A AA++AR+L R+K+ L S+SLPGKL
Sbjct: 350 IVDAVVVEGVGTFLEEHPPFAKRITEKAINAARAREAARKARELTRRKNALESTSLPGKL 409
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
ADCS P E+++VEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 410 ADCSLKDPAVCELYLVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNVEKA 458
>gi|138893684|ref|YP_001124137.1| DNA gyrase subunit B [Geobacillus thermodenitrificans NG80-2]
gi|134265197|gb|ABO65392.1| DNA gyrase subunit B [Geobacillus thermodenitrificans NG80-2]
Length = 640
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 254/473 (53%), Positives = 327/473 (69%), Gaps = 18/473 (3%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E V + Y + QIQVLEGLEAVRKRP MYIGSTGP+GLHHLV+EI+DN++DEA AGY +
Sbjct: 4 EQRVEQAYDASQIQVLEGLEAVRKRPGMYIGSTGPKGLHHLVWEIVDNSIDEALAGYCTE 63
Query: 130 IEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 189
I V + DNS+++ADNGRGIP+D+H AT + A+E ++TVLHAGGKFGG VSGGLH
Sbjct: 64 IHVTIGEDNSITIADNGRGIPVDVHEATGRPAVEVIMTVLHAGGKFGGGGY--KVSGGLH 121
Query: 190 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 249
GVG SVVNALSE LEV V+RDG ++QKY RG+P T L +D DR GT RF PD
Sbjct: 122 GVGASVVNALSEWLEVYVYRDGKIHYQKYERGEPRTDLQV----IDETDRTGTTTRFKPD 177
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 309
++FT +FD+ T+A R+RELAFLN L I L E D N+ NEYF+ GG+ YV+
Sbjct: 178 PEIFTETTEFDYETLATRLRELAFLNRGLKITLTDERVD---NRKNEYFYEGGIRSYVRH 234
Query: 310 LNTDKKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 365
LN ++ LH+ + G R DGI +++ALQ+ +D Y+ + + N+I T +GGTH G
Sbjct: 235 LNRTREVLHEEPIYIAGER---DGIAVEIALQY-NDGYTSNIYSFVNNIHTHEGGTHESG 290
Query: 366 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 425
K +LTR +N +K + KD D +L+GE VREGLT I+S++ P P+FEGQTKT+LGN +
Sbjct: 291 FKMALTRIINDYARKQQIFKDNDANLTGEDVREGLTAIVSIKHPAPQFEGQTKTKLGNSD 350
Query: 426 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 485
R V D E +L HP V I+ K + A +A +AAK+AR+L R+KS L S+LP
Sbjct: 351 ARTVTDAVFSEQFETFLLEHPAVARKIVEKGMMAARARVAAKKARELTRRKSALEISNLP 410
Query: 486 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
GKLADCSS P SE+++VEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 411 GKLADCSSRDPSISELYVVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 462
>gi|219121994|ref|XP_002181340.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407326|gb|EEC47263.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 727
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 251/481 (52%), Positives = 322/481 (66%), Gaps = 17/481 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+++YG+ QI VL+GL+ VRKRP MYIGSTGP GLHHLV+E++DN VDEA AG+A+ +
Sbjct: 63 AQSYGAGQITVLKGLDPVRKRPGMYIGSTGPDGLHHLVWEVVDNCVDEALAGHATFVTTT 122
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFG--GSSSGYSVSGGLHGV 191
+ AD S++V D+GRGIP DLH T KSALETVLT LHAGGKF GS+SGY VSGGLHGV
Sbjct: 123 IHADGSLTVTDDGRGIPTDLHSETGKSALETVLTELHAGGKFDNQGSNSGYKVSGGLHGV 182
Query: 192 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTC--HVLPVDSKDRQGTRIRFWPD 249
G+SVVNALSE + V V R Y ++ RG P L + + SK + GT + F PD
Sbjct: 183 GISVVNALSEFVHVKVDRTPELYQMRFERGVPTGPLQNLDKLKTLLSKRKSGTSVTFLPD 242
Query: 250 KQVFT-----TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 304
+VF I FD + + GR+ E+A+LN L + L+ E P + + ++ AGGL
Sbjct: 243 LKVFKGDNGKPDITFDSSRLKGRMDEIAYLNAGLVLTLKDERKSPGRGRLQVFYHAGGLA 302
Query: 305 EYVQWLNTDKKPLHDVVG-------FRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTI 357
EY + L K PL RK D + D AL+W SD Y++++L + N+IRT
Sbjct: 303 EYAELLCRTKTPLFQGTTSSRKKKPARKQKDSASDDDALRWSSDMYAESILSFCNNIRTR 362
Query: 358 DGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQT 417
DGG+H+EG+KA LTRT+N K+S K+ +L GE +REGLT I+SV V PEFEGQT
Sbjct: 363 DGGSHVEGLKACLTRTVNQAAKRSNKAKEGAANLPGEFIREGLTAIVSVSVSEPEFEGQT 422
Query: 418 KTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKS 477
K RLGNPEVR VD + LT+ + P++LD+I +K+ SA AA AAK ARD+VR+K+
Sbjct: 423 KGRLGNPEVRPAVDSLLSAELTKLFDFRPEILDAIYNKASSAQAAAAAAKAARDMVRRKT 482
Query: 478 VLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFAS 537
+L S+ LPGKLADC+S PEESEIFIVEGDSA GSAKQGRDRR Q I+ PL+ I
Sbjct: 483 LLTSTILPGKLADCASRDPEESEIFIVEGDSAAGSAKQGRDRRTQAIL-PLRGKILNIER 541
Query: 538 A 538
A
Sbjct: 542 A 542
>gi|304405884|ref|ZP_07387542.1| DNA gyrase, B subunit [Paenibacillus curdlanolyticus YK9]
gi|304345127|gb|EFM10963.1| DNA gyrase, B subunit [Paenibacillus curdlanolyticus YK9]
Length = 636
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/464 (51%), Positives = 324/464 (69%), Gaps = 13/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
TY QIQVLEGLEAVRKRP MYIGST +GLHHLV+E++DN++DEA AG+ ++I+V +
Sbjct: 7 TYDESQIQVLEGLEAVRKRPGMYIGSTSSKGLHHLVWEVVDNSIDEALAGFCTHIDVIVH 66
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+ + KS +E V+TVLHAGGKFGG GY VSGGLHGVG+SV
Sbjct: 67 EDNSITVVDNGRGIPVGENTKLKKSTVEVVMTVLHAGGKFGGE--GYKVSGGLHGVGVSV 124
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALSE + VTV RDG Y Q+Y RG P + + + GT ++F PD ++FT
Sbjct: 125 VNALSEHVTVTVKRDGHVYQQEYRRGAPQYDIKV----IGDSEETGTIVQFKPDPEIFTE 180
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
+++ + RIRELAFLN ++I+L +D Q N Y + GG+ E+V++LN +++
Sbjct: 181 TTVYEYEILQSRIRELAFLNKGISISL----TDERTGQSNIYKYDGGIIEFVKYLNRNRE 236
Query: 316 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
LH+ + + D I +++ALQ+ +D+YSD + +AN+I T +GGTH G K++LTR +
Sbjct: 237 ALHETPIYVEGEKDHIQVEVALQY-NDSYSDNIYSFANNINTHEGGTHESGFKSALTRII 295
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +++ ++KD D +LSG+ VREGLT IISV++P P+FEGQTKT+LGN EVR +V+
Sbjct: 296 NDYARRTNSIKDNDSNLSGDDVREGLTAIISVKIPEPQFEGQTKTKLGNSEVRGIVESFF 355
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E L E+L+ +P V I+ K L A +A AA++AR+L R+KS L SSLPGKLADCSS
Sbjct: 356 AEKLQEFLDENPSVSKRIVEKGLQASRAREAARKARELTRRKSALEVSSLPGKLADCSSK 415
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 416 DASISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 458
>gi|196249898|ref|ZP_03148594.1| DNA gyrase, B subunit [Geobacillus sp. G11MC16]
gi|196210774|gb|EDY05537.1| DNA gyrase, B subunit [Geobacillus sp. G11MC16]
Length = 640
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 254/473 (53%), Positives = 327/473 (69%), Gaps = 18/473 (3%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E V + Y + QIQVLEGLEAVRKRP MYIGSTGP+GLHHLV+EI+DN++DEA AGY +
Sbjct: 4 EQRVKQAYDASQIQVLEGLEAVRKRPGMYIGSTGPKGLHHLVWEIVDNSIDEALAGYCTE 63
Query: 130 IEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 189
I V + DNS+++ADNGRGIP+D+H AT + A+E ++TVLHAGGKFGG VSGGLH
Sbjct: 64 IHVTIGEDNSITIADNGRGIPVDVHEATGRPAVEVIMTVLHAGGKFGGGGY--KVSGGLH 121
Query: 190 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 249
GVG SVVNALSE LEV V+RDG ++QKY RG+P T L +D DR GT RF PD
Sbjct: 122 GVGASVVNALSEWLEVYVYRDGKIHYQKYERGEPRTDLQV----IDETDRTGTTTRFKPD 177
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 309
++FT +FD+ T+A R+RELAFLN L I L E D N+ NEYF+ GG+ YV+
Sbjct: 178 PEIFTETTEFDYETLATRLRELAFLNRGLKITLTDERVD---NRKNEYFYEGGIRSYVRH 234
Query: 310 LNTDKKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 365
LN ++ LH+ + G R DGI +++ALQ+ +D Y+ + + N+I T +GGTH G
Sbjct: 235 LNRTREVLHEEPIYIAGER---DGIAVEIALQY-NDGYTSNIYSFVNNIHTHEGGTHESG 290
Query: 366 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 425
K +LTR +N +K + KD D +L+GE VREGLT I+S++ P P+FEGQTKT+LGN +
Sbjct: 291 FKMALTRIINDYARKQQIFKDNDANLTGEDVREGLTAIVSIKHPAPQFEGQTKTKLGNSD 350
Query: 426 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 485
R V D E +L HP V I+ K + A +A +AAK+AR+L R+KS L S+LP
Sbjct: 351 ARTVTDAVFSEQFETFLLEHPAVARKIVEKGMMAARARVAAKKARELTRRKSALEISNLP 410
Query: 486 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
GKLADCSS P SE+++VEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 411 GKLADCSSRDPSISELYVVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 462
>gi|303246810|ref|ZP_07333087.1| DNA gyrase, B subunit [Desulfovibrio fructosovorans JJ]
gi|302491827|gb|EFL51707.1| DNA gyrase, B subunit [Desulfovibrio fructosovorans JJ]
Length = 810
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 242/459 (52%), Positives = 321/459 (69%), Gaps = 13/459 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y + I VLEGL AVRKRPAMYIGST RGLHHLV+E++DN++DE+ AG+ I V +
Sbjct: 14 QAYDASSITVLEGLSAVRKRPAMYIGSTDSRGLHHLVWEVVDNSIDESMAGFCDRIVVTI 73
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DNSV+V+DNGRGIP+D+HP ++ A+E V+TVLHAGGKF + Y VSGGLHGVG+S
Sbjct: 74 HLDNSVTVSDNGRGIPVDMHPKEHRPAVEVVMTVLHAGGKFDNET--YKVSGGLHGVGVS 131
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALSE LEVTV RDG ++ Q+Y RG PVT LT + D GT IRF PD+++F
Sbjct: 132 VVNALSEYLEVTVRRDGKKHQQRYERGVPVTPLTV----IGEADVTGTTIRFKPDEEIFE 187
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
T QF+H+T+ R ELA+LN L I R E + N+ Y F GGL+ +V LN +
Sbjct: 188 TN-QFNHDTLVKRFEELAYLNRGLEIDYRDERT----NERVTYRFDGGLKRFVADLNAGE 242
Query: 315 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+ +HD++ ++DGI D ALQ+ ++ Y + +L +AN+IRT +GGTH+ G K +LTR +
Sbjct: 243 QTIHDIIDGTGEIDGIVTDFALQYNAN-YKEEVLTFANNIRTREGGTHLAGFKTALTRAI 301
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N+ +KS K L+G+ VREGLT +ISV++P P+FEGQTKT+LGN EV +V + V
Sbjct: 302 NTYIEKSDLPKKFKQKLTGDDVREGLTAVISVKLPGPQFEGQTKTKLGNSEVAGIVAKVV 361
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E + + E +P SI+ K++ A +A AA++A++LVR+K L SLPGKLADC S
Sbjct: 362 FEAMNVHFEENPKDAKSIVEKAVDAARAREAARKAKELVRRKGALSDHSLPGKLADCQSK 421
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
PEESE+FIVEGDSAGGSAKQGRD RFQ I+ PL+ I
Sbjct: 422 NPEESELFIVEGDSAGGSAKQGRDPRFQAIL-PLRGKIL 459
>gi|345862366|ref|ZP_08814591.1| DNA gyrase, B subunit [Desulfosporosinus sp. OT]
gi|344324551|gb|EGW36104.1| DNA gyrase, B subunit [Desulfosporosinus sp. OT]
Length = 659
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 235/466 (50%), Positives = 329/466 (70%), Gaps = 12/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S +Y + QI+VLEGLEAVRKRP MYIG+T RGLHHLVYEI+DN++DEA AG+ + I+V
Sbjct: 28 SDSYNAGQIEVLEGLEAVRKRPGMYIGTTSSRGLHHLVYEIVDNSIDEALAGFCNQIDVF 87
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ ADNS++V DNGRGIP+D+HP T A+E LTVLHAGGKFGGS S Y VSGGLHGVGL
Sbjct: 88 IHADNSITVVDNGRGIPVDIHPKTGIPAVEVALTVLHAGGKFGGSESAYKVSGGLHGVGL 147
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ L V V + G YHQ+Y+ GKP T +++ + + GT+I F PD +F
Sbjct: 148 SVVNALSKWLVVEVSKGGHVYHQEYAIGKP----TSNLVNIGITESSGTKISFIPDPDIF 203
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
+ +D + +A R+REL+FLN +TI L +D N + GG++++V++LN +
Sbjct: 204 EDTV-YDFDILAHRLRELSFLNKSVTINL----TDERTNVKETFLHTGGIQDFVRYLNKN 258
Query: 314 KKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K LH F + + D + +++++Q+ +D Y++ + YAN+I T +GGTH G K++LTR
Sbjct: 259 KDCLHPQPIFIETIKDHVQVEVSMQY-NDGYAENLFSYANNINTQEGGTHEAGFKSALTR 317
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N +K+ +K D +L+G+ +REGLT +ISV+VP+P+FEGQTKT+LGN E+R +VD
Sbjct: 318 VVNDYARKNNIIKAADSNLTGDDIREGLTAVISVKVPDPQFEGQTKTKLGNSEIRGIVDS 377
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ E L+ +LE +P + + KS+ A +A AA++AR+L R+KS L +SLPGKLADCS
Sbjct: 378 ATGEGLSTFLEENPAIARKFIDKSVQAARARDAARKARELTRRKSALEGTSLPGKLADCS 437
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P+ E+++VEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 438 WKEPDLCEMYLVEGDSAGGSAKQGRDRRFQAIL-PLRGKIINVEKA 482
>gi|23978227|dbj|BAC21110.1| DNA gyrase B subunit [Microcystis wesenbergii]
Length = 391
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 230/397 (57%), Positives = 300/397 (75%), Gaps = 8/397 (2%)
Query: 102 TGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSA 161
TGPRGLHHLVYE++DN++DEA AGY ++IEV + AD SVSV D+GRGIP D+HP T KSA
Sbjct: 1 TGPRGLHHLVYEVVDNSIDEALAGYCTHIEVDIKADGSVSVTDDGRGIPTDVHPTTGKSA 60
Query: 162 LETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG 221
LETVLT+LHAGGKFG S GY VSGGLHGVG+SVVNALS ++VTVWRD + Q+Y RG
Sbjct: 61 LETVLTILHAGGKFG--SGGYKVSGGLHGVGISVVNALSAWVDVTVWRDHKVHTQRYERG 118
Query: 222 KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIA 281
PVT L V D+ GTR+ F PD ++F+ I+FD++T++GR+RELA+LN + I
Sbjct: 119 IPVTEL---VSSPSEGDKTGTRVNFLPDTEIFSQGIEFDYSTLSGRLRELAYLNAGVKIT 175
Query: 282 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCS 340
D PE+ Y + GG++EYV ++ +K+ LH D++ + +GI +++A QWC
Sbjct: 176 F--SDYRPEEPHIEIYCYEGGIKEYVAYMCREKETLHKDIIYVSGEKNGINLEVAFQWCI 233
Query: 341 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 400
DAY+D +LG+AN+IRTIDGG H++G+KA LTRTLN++ +K +K+ + +L+GE+VREGL
Sbjct: 234 DAYTDNILGFANNIRTIDGGPHLKGLKAVLTRTLNNVARKRNKIKENEPNLAGENVREGL 293
Query: 401 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 460
T +ISV+VP PEFEGQTKT+LGN EVR +VD V E L EYLE +P V D+I+ K++ A
Sbjct: 294 TAVISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGETLNEYLEQNPQVADTIIEKAVQAY 353
Query: 461 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPE 497
KAA AA+RARDLVR+KSVL SS LPGKLADCS PE
Sbjct: 354 KAAEAARRARDLVRRKSVLESSPLPGKLADCSERDPE 390
>gi|375092559|ref|ZP_09738837.1| DNA gyrase, B subunit [Helcococcus kunzii ATCC 51366]
gi|374560728|gb|EHR32085.1| DNA gyrase, B subunit [Helcococcus kunzii ATCC 51366]
Length = 637
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/465 (51%), Positives = 318/465 (68%), Gaps = 15/465 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG I+VLEGLEAVR RP MYIGST RGLHHLVYE++DN+VDEA AG A +I V L
Sbjct: 7 YGESNIRVLEGLEAVRVRPGMYIGSTDERGLHHLVYEVVDNSVDEALAGRADSIVVELHQ 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D S V DNG GIP+ H T KS LETVLT+LHAGGKF S Y+ SGGLHGVG+SVV
Sbjct: 67 DGSCEVTDNGSGIPVKKHATTGKSTLETVLTILHAGGKF--DSEAYAFSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS L + RDG Y Q++S+GKP T L H + D GT IRFWPD +VF T
Sbjct: 125 NALSTKLVAEIRRDGYRYTQEFSQGKPKTKLQKH----EETDETGTSIRFWPDGEVFET- 179
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKK 315
+ F+ T+ R E+ FLN L I L DP ++ E F A GGL +V++LN +
Sbjct: 180 LDFNRATLEKRFEEMTFLNEGLKITLIDYREDP---KFEEDFIAEGGLSTFVKFLNKKRT 236
Query: 316 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
LHD V+ ++ VDG +D A+Q+ +D+YS+ +L +AN++ T +GGTH+ G ++ LT+T+
Sbjct: 237 ALHDDVIHYKGMVDGSEVDFAMQY-TDSYSENVLSFANTVLTGEGGTHLTGFRSGLTKTI 295
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N+ ++ +K+KD + SGE +REG+T II+V++ NP+FEGQTK +LG+ E+R +VD V
Sbjct: 296 NNYAREYDFLKEKDENYSGEDIREGITAIIAVKLSNPQFEGQTKGKLGSSEMRGIVDTFV 355
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQK-SVLRSSSLPGKLADCSS 493
E L+EYLE +P + I+ K SA +A +A+K+ARDL R K S+L S++LPGKLA+C S
Sbjct: 356 SEKLSEYLEENPKIAKKIMDKCESARRARVASKKARDLSRNKNSLLSSTTLPGKLAECQS 415
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
T E+E+FIVEGDSAGGSAK GRD ++Q I+ P++ I A
Sbjct: 416 TDITENELFIVEGDSAGGSAKLGRDNKYQAIL-PIRGKILNVEKA 459
>gi|167629176|ref|YP_001679675.1| DNA gyrase, b subunit [Heliobacterium modesticaldum Ice1]
gi|167591916|gb|ABZ83664.1| DNA gyrase, b subunit [Heliobacterium modesticaldum Ice1]
Length = 641
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/461 (51%), Positives = 323/461 (70%), Gaps = 14/461 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ +Y + QIQVLEGLEAVR+RP MYIGST RGLHHLVYEI+DN++DEA AGY + I+V
Sbjct: 12 ASSYDASQIQVLEGLEAVRRRPGMYIGSTSARGLHHLVYEIVDNSIDEALAGYCNRIDVI 71
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS+ V DNGRGIP+D+HP K A+E LTVLHAGGKFGG GY VSGGLHGVGL
Sbjct: 72 IHDDNSIEVIDNGRGIPVDIHPKMGKPAVEVALTVLHAGGKFGGE--GYKVSGGLHGVGL 129
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE L VTV R+G + Q Y RG + L V GT I F PD Q+F
Sbjct: 130 SVVNALSEKLRVTVRRNGKIHEQHYERGVATSELRV----VGQSKETGTTIYFKPDPQIF 185
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
+++ ++T++ R+REL+FLN + I L +D Q + + +GG+ ++V++LN +
Sbjct: 186 D-ELEYSYDTLSHRLRELSFLNRGVRITL----TDKRSGQESVFAHSGGIVDFVKFLNRN 240
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K +H +V+ F+ + DG+ +++ALQ+ +D Y + + YAN+I T +GGTH G K +LTR
Sbjct: 241 KDVIHNEVIYFQTEKDGVHVEVALQY-NDGYVENLFSYANNINTQEGGTHEAGFKTALTR 299
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N ++ +KD + +LSGE +REG+T +ISV+V P+FEGQTKT+LGN EVR ++D
Sbjct: 300 VVNEYARRLNQLKDNENNLSGEDIREGITAVISVKVREPQFEGQTKTKLGNSEVRGIIDS 359
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
V E + YLE HP + I+ K++ A++A AA++AR+L R+K+ L S+SLPGKLADCS
Sbjct: 360 CVTEGVGTYLEEHPSIAKRIIEKAIGAMRAREAARKARELTRRKTALESTSLPGKLADCS 419
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P E+++VEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 420 FKDPSLCELYLVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 459
>gi|323342250|ref|ZP_08082482.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Erysipelothrix
rhusiopathiae ATCC 19414]
gi|336065250|ref|YP_004560108.1| DNA gyrase subunit B [Erysipelothrix rhusiopathiae str. Fujisawa]
gi|322463362|gb|EFY08556.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Erysipelothrix
rhusiopathiae ATCC 19414]
gi|334295196|dbj|BAK31067.1| DNA gyrase, B subunit [Erysipelothrix rhusiopathiae str. Fujisawa]
Length = 639
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 230/467 (49%), Positives = 318/467 (68%), Gaps = 9/467 (1%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V +Y S IQVLEGLEAVRKRP MYIG+T RGLHHLV+EI+DN +DEA AG+A+ I V
Sbjct: 6 VDHSYTSSDIQVLEGLEAVRKRPGMYIGTTASRGLHHLVWEIVDNGIDEALAGFATEIIV 65
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DN +SV+DNGRGIP+ +H T S ET+ TVLHAGGKFGG + Y VSGGLHGVG
Sbjct: 66 NVDKDNVISVSDNGRGIPVGIHAKTGVSTAETIFTVLHAGGKFGGGA--YKVSGGLHGVG 123
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
SVVNALSE LEV ++ DG+EY+ ++ G V + V D++GT +RF D +
Sbjct: 124 ASVVNALSEWLEVKIYLDGIEYYLRFEEGGKVA---VPLKEVGKTDKKGTTVRFKADPTI 180
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FT +F H+ + R+R++AFLN + + + E +PE+ ++ E+ + GL EYVQ++N
Sbjct: 181 FTETTEFSHDVLRDRLRQIAFLNKGIKLVFQDE-REPEETRHLEFVYEDGLREYVQYMNA 239
Query: 313 DKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K P+H+ +V + +GI +++++Q+ +D ++ + + N+I T +GGTH +G K +LT
Sbjct: 240 NKSPIHEEIVYCEGEEEGILVEVSMQY-NDGFTPNIYSFCNNINTHEGGTHEDGFKLALT 298
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R +N+ K+ +K D G+ VREGLT IISV+ P+P++EGQTKT+LGN EVRK+V
Sbjct: 299 RVINNYAKEHNLLKKDDDGFLGDDVREGLTAIISVKHPDPQYEGQTKTKLGNSEVRKIVS 358
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
E L +L HPD I+ K+ A KA +AA++AR+L R+K L SSLPGKLADC
Sbjct: 359 SVFGEQLERFLMEHPDDAKIIVDKAAIASKARVAARKARELTRRKGALEVSSLPGKLADC 418
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S+ P E EI+IVEGDSAGGSAKQGRD +FQ I+ PL+ + A
Sbjct: 419 SNRNPSECEIYIVEGDSAGGSAKQGRDSKFQAIL-PLRGKVINVEKA 464
>gi|381210628|ref|ZP_09917699.1| DNA gyrase subunit B [Lentibacillus sp. Grbi]
Length = 641
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/464 (49%), Positives = 319/464 (68%), Gaps = 11/464 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ YG++QIQVLEGLEAVRKRP MYIG+T RGLHHLV+EI+DN++DEA AG+ I++ +
Sbjct: 11 QAYGADQIQVLEGLEAVRKRPGMYIGTTSERGLHHLVWEIVDNSIDEALAGFCDKIQLVI 70
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DNS++V DNGRGIP+D+ T K ALE ++TVLHAGGKF S+ Y VSGGLHGVG S
Sbjct: 71 EKDNSITVIDNGRGIPVDIQKKTGKPALEVIMTVLHAGGKF--SNDSYKVSGGLHGVGAS 128
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS SL+V V RDG Y+ + +G P + + D GT+ +F PD ++F
Sbjct: 129 VVNALSSSLDVYVHRDGNIYYLGFQKGVPQGKIET----IGETDITGTKTQFKPDPEIFV 184
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
+ +F+ + R+RELAFLN +TI+L + +D E EY + GG+ YV+++N ++
Sbjct: 185 ESTEFNFELLEQRVRELAFLNKGITISLEDKRTDQEPV---EYHYEGGISSYVKYINRNR 241
Query: 315 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+ LH+ + D I +++A+Q+ +D ++ + +AN+I T +GG+H G K+ LTR +
Sbjct: 242 EVLHEPFYSETEDDQIMVEVAIQY-NDGFASNIYSFANNIHTYEGGSHESGFKSGLTRAI 300
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +K+ K+ D +LSG+ VREGLT I+S++ P+P+FEGQTKT+LGN EV+KV D +
Sbjct: 301 NDYARKNSMFKENDPNLSGDDVREGLTAIVSIKHPDPQFEGQTKTKLGNSEVKKVTDSAF 360
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E +++L +PDV ++ K L A +A LAAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 361 SEAFSKFLFENPDVAKLVVEKGLMASRARLAAKKARELTRRKSALEVSNLPGKLADCSSR 420
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
E++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 421 DASIGELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 463
>gi|433426701|ref|ZP_20406924.1| DNA gyrase subunit B [Haloferax sp. BAB2207]
gi|448570957|ref|ZP_21639468.1| DNA gyrase subunit B [Haloferax lucentense DSM 14919]
gi|448595853|ref|ZP_21653300.1| DNA gyrase subunit B [Haloferax alexandrinus JCM 10717]
gi|432196866|gb|ELK53287.1| DNA gyrase subunit B [Haloferax sp. BAB2207]
gi|445722875|gb|ELZ74526.1| DNA gyrase subunit B [Haloferax lucentense DSM 14919]
gi|445742307|gb|ELZ93802.1| DNA gyrase subunit B [Haloferax alexandrinus JCM 10717]
Length = 639
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 242/459 (52%), Positives = 317/459 (69%), Gaps = 11/459 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ IEVAL
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDAIEVALHE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSV DNGRGIP+D H ++ ALE ++TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVTDNGRGIPVDTHEQYDRPALEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS LEV V RDG + ++ G+P V ++ + GT IRFWPD +F T
Sbjct: 125 NALSSELEVEVKRDGAVWTHRFEVGEPQVEEFERVRDLEPGEDTGTTIRFWPDDGIFETT 184
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+FD T+ R+RELAFLN + I+L SD ++ + + F GG+ E+V++LN K
Sbjct: 185 -EFDFKTLENRLRELAFLNSGVEISL----SDERTDESSTFLFEGGIREFVEYLNETKTA 239
Query: 317 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LHD V+ + + +GI +++A+Q +D ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 240 LHDDVIYYDDESEGIEVEIAMQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVN 298
Query: 376 SLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
+ D D +L GE VREGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 299 DYANSHDMLDDLDGDNLRGEDVREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESVT 358
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
+ L + E +PD +I+SK++ A +A AAK+A +L R+KS L S+SLPGKLADC S
Sbjct: 359 HQQLGTFFEENPDTATAIISKAVEAARARKAAKQAEELTRRKSALESTSLPGKLADCQSR 418
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P ESE+FIVEGDSAGGSAKQGRDR+FQ I+ PL+ I
Sbjct: 419 DPSESELFIVEGDSAGGSAKQGRDRKFQAIL-PLKGKIL 456
>gi|402833234|ref|ZP_10881854.1| DNA gyrase, B subunit [Selenomonas sp. CM52]
gi|402281226|gb|EJU29917.1| DNA gyrase, B subunit [Selenomonas sp. CM52]
Length = 690
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/467 (50%), Positives = 324/467 (69%), Gaps = 14/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+ QIQ+LEGLEAVRKRP MYIGST RGLHHLVYE++DN++DEA AGY +I+V
Sbjct: 60 VDGDYGANQIQILEGLEAVRKRPGMYIGSTSERGLHHLVYEVVDNSIDEALAGYCDHIDV 119
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V DNGRGIP+D+H + K A+E VLTVLHAGGKFGG GY VSGGLHGVG
Sbjct: 120 TIEKDNSITVVDNGRGIPVDMHE-SGKPAVEVVLTVLHAGGKFGGE--GYKVSGGLHGVG 176
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS S++V V RDG + ++ +G LT + ++ GT++ F PD ++
Sbjct: 177 VSVVNALSTSMDVEVKRDGKIHSIRFEQGVTAAPLTV----IGETEKTGTKVHFVPDPEI 232
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FT Q+ +T+ R+RELAFLN +TI L + + + Y F+ GG+ +V+ LN
Sbjct: 233 FTVT-QYSFDTLKHRLRELAFLNQGITIRLMDKRGEGREESY---FYEGGIRSFVEHLNR 288
Query: 313 DKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
K+ +H + F D +++A+Q+ +D+Y + + + N+I T +GGTH+ G K +LT
Sbjct: 289 KKEVIHPTPIYFNGIKDDTVVEIAMQY-NDSYMENIYSFVNNINTEEGGTHLAGFKIALT 347
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R N +K +KDKD +LSGE VREGLTC+IS+++ P+FEGQTKT+LGN EVR +VD
Sbjct: 348 RAANDFARKQGILKDKDGNLSGEDVREGLTCVISLKIHEPQFEGQTKTKLGNSEVRGIVD 407
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E LTEY E +P + ++ K++ A +A AA++AR+L R+K+ L SSLPGKLADC
Sbjct: 408 SIVTEGLTEYFEENPAITKKVIEKAIMASRAREAARKARELTRRKNALEVSSLPGKLADC 467
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PE++EI++VEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 468 SIKDPEQAEIYLVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNVEKA 513
>gi|389847084|ref|YP_006349323.1| DNA gyrase subunit B [Haloferax mediterranei ATCC 33500]
gi|448614967|ref|ZP_21663995.1| DNA gyrase subunit B [Haloferax mediterranei ATCC 33500]
gi|388244390|gb|AFK19336.1| DNA gyrase subunit B [Haloferax mediterranei ATCC 33500]
gi|445753054|gb|EMA04473.1| DNA gyrase subunit B [Haloferax mediterranei ATCC 33500]
Length = 639
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/459 (52%), Positives = 318/459 (69%), Gaps = 11/459 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY IEVAL
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGYCDAIEVALHE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSV DNGRGIP+D H ++ ALE ++TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVTDNGRGIPVDTHEQYDRPALEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS+ LEV V RDG + ++ G+P V ++ + GT IRFWP+ ++F T
Sbjct: 125 NALSQKLEVEVKRDGAVWTHRFEHGEPKPDQFERVRDLEPGEDTGTTIRFWPEGEIFETT 184
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+FD T+ R+RELAFLN + I L E +D + + + F GG+ E+V++LN K
Sbjct: 185 -EFDFKTLENRLRELAFLNSGVEITLTDERTD----KSSTFLFEGGIREFVEYLNETKTA 239
Query: 317 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LHD ++ + + +GI +++A+Q +D ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 240 LHDDLIYYEDESEGIEVEIAMQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVN 298
Query: 376 SLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
+ D D +L GE VREGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 299 DYANSEGMLSDLDGDNLRGEDVREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESVT 358
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E L + E +PD +I+SK++ A +A AAK+A +L R+KS L S+SLPGKLADC +
Sbjct: 359 HEQLGTFFEENPDTATAIISKAVEAARARKAAKQAEELTRRKSALESTSLPGKLADCQTR 418
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P ESE+F+VEGDSAGGSAKQGRDR+FQ I+ PL+ I
Sbjct: 419 DPTESELFVVEGDSAGGSAKQGRDRKFQAIL-PLRGKIL 456
>gi|365838869|ref|ZP_09380126.1| DNA gyrase, B subunit [Anaeroglobus geminatus F0357]
gi|364566379|gb|EHM44071.1| DNA gyrase, B subunit [Anaeroglobus geminatus F0357]
Length = 605
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 243/476 (51%), Positives = 336/476 (70%), Gaps = 18/476 (3%)
Query: 67 AFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGY 126
+F +YG+EQIQVLEGLEAVRKRP MYIGST +GLHHLVYE++DN++DEA AGY
Sbjct: 9 SFMSEKKKSSYGAEQIQVLEGLEAVRKRPGMYIGSTSLKGLHHLVYEVVDNSIDEALAGY 68
Query: 127 ASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSG 186
A++IEV + ADNSV+V DNGRGIP+ +H K A+E VLTVLHAGGKFGG GY +SG
Sbjct: 69 ATHIEVTIEADNSVTVIDNGRGIPVAMH-KIGKPAIEVVLTVLHAGGKFGGE--GYPISG 125
Query: 187 GLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRF 246
GLHGVG+SVVNALSE ++ V RDG ++ ++RG L V P+++ D +GT++ F
Sbjct: 126 GLHGVGISVVNALSEQTKIEVKRDGYLWNIAFARGLTTKPLQ-KVRPLEAGDERGTKVWF 184
Query: 247 WPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEY 306
PD ++F +D T+ R+RELAFLN LTI L +D K++ Y + GGL+ +
Sbjct: 185 KPDPEIFPDT-AYDFETLRIRLRELAFLNKGLTITL----TDKRKDRKEVYHYEGGLKSF 239
Query: 307 VQWLNTDKKPLHDVV----GFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTH 362
V++LN ++ P++ V G + D I +D+ALQ+ +D YS+ +L + N+I T +GGTH
Sbjct: 240 VEFLNENRNPVNSTVISLEGIKND---IIVDIALQY-NDGYSENILTFVNNIFTEEGGTH 295
Query: 363 IEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLG 422
+ G ++ LTRT+N G+ S +K+ + +LSGE VREGLT IISV+V P+FEGQTKT+LG
Sbjct: 296 LSGFRSGLTRTINDYGRSSGIIKENEENLSGEDVREGLTAIISVKVREPQFEGQTKTKLG 355
Query: 423 NPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSS 482
N EV+ +VD + + L + E +P +I++K+++A +A AA++AR+L R+K+ L S
Sbjct: 356 NSEVKGIVDNIISDGLNQTFEENPSEAKAIVNKNINAARARQAARKARELTRRKNALEIS 415
Query: 483 SLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SLPGKLADCS P+ +EI++VEGDSAGGSAKQGRDR+FQ I+ PL+ I A
Sbjct: 416 SLPGKLADCSEKDPDRTEIYLVEGDSAGGSAKQGRDRKFQAIL-PLRGKIINVEKA 470
>gi|383320651|ref|YP_005381492.1| DNA gyrase subunit B [Methanocella conradii HZ254]
gi|379322021|gb|AFD00974.1| DNA gyrase subunit B [Methanocella conradii HZ254]
Length = 635
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/465 (50%), Positives = 322/465 (69%), Gaps = 15/465 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y + IQVLEGLEAVRKRP+MYIGST RGLHHLVYE++DN++DEA AGY NIEV++
Sbjct: 8 QAYDASSIQVLEGLEAVRKRPSMYIGSTDERGLHHLVYEVVDNSIDEALAGYCKNIEVSI 67
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
D SV+V D+GRGIP+++H ++ ALE V+T+LHAGGKF + Y VSGGLHGVG+S
Sbjct: 68 NNDGSVTVNDDGRGIPVEMHEKYHRPALEIVMTMLHAGGKFDNRT--YKVSGGLHGVGVS 125
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALSE ++V V R+G Y Q Y RGKP T V + + GTR+ F PD +F
Sbjct: 126 VVNALSEWMKVEVRRNGRLYVQDYVRGKP----TDEVHEIGTAIGTGTRVTFKPDPTIFE 181
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
T +F ++ +A R+RELAFLN + I +D + + GG+ ++V +LN K
Sbjct: 182 TT-EFKYDILANRLRELAFLNKGIKITF----TDARSGVSEVFHYEGGIVQFVHYLNEGK 236
Query: 315 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
PLHD V+ F K D +++A+Q+ +D Y++ +L +AN+I T +GGTH+ G +++LTR+
Sbjct: 237 TPLHDKVIYFEKQKDTTNVEIAMQY-NDGYNEIVLAFANNINTTEGGTHLSGFRSALTRS 295
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
N KK+ +K D+ LSG+ VREGLT IISV++ NP+FEGQTKT+LGN EV+ +V+
Sbjct: 296 FNDYAKKNNLLKG-DMVLSGDDVREGLTAIISVKLTNPQFEGQTKTKLGNSEVQGIVNSL 354
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
V E L +YLE +P I+ K++ A A AA++AR+L R+KS L SS+LPGKLADCS
Sbjct: 355 VGEGLDDYLEENPADARKIIEKAIQAFHAREAARKARELTRRKSALESSTLPGKLADCSE 414
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PE+ E+++VEGDSAGGSAKQGR+R +Q I+ PL+ I A
Sbjct: 415 KDPEKCELYLVEGDSAGGSAKQGRNRMYQAIL-PLRGKILNVEKA 458
>gi|257062759|ref|YP_003142431.1| DNA gyrase subunit B [Slackia heliotrinireducens DSM 20476]
gi|256790412|gb|ACV21082.1| DNA gyrase subunit B [Slackia heliotrinireducens DSM 20476]
Length = 648
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/467 (50%), Positives = 320/467 (68%), Gaps = 9/467 (1%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S Y + IQVLEGLEAVRKRP MYIGSTG RGLHHLVYE++DNAVDEA AGY + I+V
Sbjct: 6 SSHYDAGDIQVLEGLEAVRKRPGMYIGSTGTRGLHHLVYEVVDNAVDEALAGYCTKIDVI 65
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++V DNGRGIP++ HP +E VLT+LHAGGKFGG GY VSGGLHGVG+
Sbjct: 66 IHEDNSITVIDNGRGIPVEKHPKEKIPTVEVVLTILHAGGKFGGE--GYKVSGGLHGVGV 123
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
S VNALS LEV V RDG +Y +SRGK V L + + GT + FWPD ++F
Sbjct: 124 SCVNALSTRLEVEVCRDGKKYGIAFSRGKTVEKLH----QIGTSKTTGTTVTFWPDPEIF 179
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKE-DSDPEKNQYNEYF-FAGGLEEYVQWLN 311
T + +D+ T+ R RE+AFLN L I L E D E N +E F + GG+ ++V++LN
Sbjct: 180 TDTLVYDYETLQERFREMAFLNKGLRIELTDERQQDEEGNFKHETFKYDGGIVDFVKYLN 239
Query: 312 TDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
K+ L+ + F + T+++ +QW + ++ ++ +AN+I T +GGTH++G K +LT
Sbjct: 240 QGKETLNKPIYFEAENADGTVEVVMQWSTSYGTNGIMAFANNINTHEGGTHLDGFKNALT 299
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RT+N + +K+KD +L+G+ REGL IISV++ +P+FEGQTKT+LGN E+R +V
Sbjct: 300 RTINDYARSKGLLKEKDKNLTGDDAREGLAAIISVKLHDPQFEGQTKTKLGNVEIRGLVQ 359
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+V + L+EYLE +P I+ K+ ALKA AA++AR++ R+K VL S S+PGKLADC
Sbjct: 360 GAVTKGLSEYLEENPTPAKRIVGKASQALKAREAARKAREMTRRKGVLDSFSMPGKLADC 419
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SS P SE+FIVEGDSAGGSAKQ RDR++Q I+ PL+ I A
Sbjct: 420 SSREPALSEMFIVEGDSAGGSAKQARDRKYQAIL-PLRGKILNVERA 465
>gi|323450751|gb|EGB06631.1| hypothetical protein AURANDRAFT_29093 [Aureococcus anophagefferens]
Length = 698
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 257/513 (50%), Positives = 337/513 (65%), Gaps = 38/513 (7%)
Query: 44 SQVLTRSN-VVLPRAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGST 102
++VL R+ + PR+ ++ T ++ + YG+ QI VLEGLEAVRKRP MYIGST
Sbjct: 6 ARVLRRAGGLSAPRSSAATRTTTRLYEAT--TGAYGAGQITVLEGLEAVRKRPGMYIGST 63
Query: 103 GPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSAL 162
GP+GLHHL +EILDN++DE AG+A+ + V L AD S +V D+GRGIP DLHP T KSAL
Sbjct: 64 GPKGLHHLCFEILDNSIDEVMAGHATKVAVELRADGSCAVGDDGRGIPCDLHPQTGKSAL 123
Query: 163 ETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGK 222
ETVL VLHAGGKFGG+ SGY VSGGLHGVGLSVVNALS L+V V RDG +SRG
Sbjct: 124 ETVLCVLHAGGKFGGAESGYRVSGGLHGVGLSVVNALSHQLDVEVTRDGSVASMAFSRGT 183
Query: 223 PVTTLTCHVLPVDSKD--RQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTI 280
P +T VD+ GTR+ F PD +F + FD++ +A R+ ELAFLN + +
Sbjct: 184 PTGDMT----RVDAAPGAATGTRVVFSPDGDIFEKTV-FDYDVLAARMDELAFLNAGVEL 238
Query: 281 AL----------RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVG-------- 322
+L +K D P + + GG+ EY +L ++K PLH +G
Sbjct: 239 SLTDFREPKKKKKKGDGGPRVDVFRH---DGGISEYADFLTSEKTPLHAALGPSVTKGKH 295
Query: 323 ------FRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNS 376
R DG+ ++ AL+W SDAY++ + +AN IRT DGGTH++G+++ + R++N+
Sbjct: 296 TKEAFVARGTKDGVEVECALRWSSDAYAEVTVSFANGIRTADGGTHVDGLRSVVARSVNA 355
Query: 377 LGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQE 436
K+S + K + + GE+VREGLT ++ V VP PEFEGQTKTRLG+P VR+VVD V
Sbjct: 356 AAKRSPSGKSDNAYVPGEYVREGLTAVLLVNVPEPEFEGQTKTRLGSPGVRQVVDAVVGA 415
Query: 437 YLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTP 496
L + E HP L +I+ K+L+A KAA AAK ARDLVR+KS+L ++ LPGKLADCS
Sbjct: 416 ALQQLFEWHPQALKAIVDKALAAQKAAGAAKAARDLVRRKSLLATTVLPGKLADCSLRDA 475
Query: 497 EESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQ 529
SEIFIVEGDSA GSAKQGRDR Q I+ PL+
Sbjct: 476 ALSEIFIVEGDSAAGSAKQGRDRESQAIL-PLR 507
>gi|363894897|ref|ZP_09321945.1| DNA gyrase, B subunit [Eubacteriaceae bacterium ACC19a]
gi|361961139|gb|EHL14363.1| DNA gyrase, B subunit [Eubacteriaceae bacterium ACC19a]
Length = 641
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/470 (50%), Positives = 331/470 (70%), Gaps = 19/470 (4%)
Query: 70 ENPVSKT-YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
+N +++T YG+EQIQVLEGLE VRKRP MYIGSTG +GLHHLVYE++DNA+DEA AG+
Sbjct: 3 DNDINQTAYGAEQIQVLEGLEPVRKRPGMYIGSTGSKGLHHLVYEVVDNAIDEALAGFCD 62
Query: 129 NIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 188
I V++ +N ++V DNGRGIP+++HP T KS LETVLTVLHAGGKFG + GY VSGGL
Sbjct: 63 KIYVSIDVNNGITVIDNGRGIPVEVHPKTGKSTLETVLTVLHAGGKFG--AGGYKVSGGL 120
Query: 189 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTL----TCHVLPVDSKDRQGTRI 244
HGVG+SVVNALS+SL V +DG Y Q++ G VT + TC + + GT I
Sbjct: 121 HGVGVSVVNALSKSLTAVVKKDGKVYKQEFEYGNAVTDIKQIGTCPL------EETGTCI 174
Query: 245 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 304
F PD+++F + + T+ R+RELAFLN ++I L ED+ Y + GG+
Sbjct: 175 SFLPDEKIFDETV-YSFETLEHRLRELAFLNKGISITL--EDNRTSDKISKTYHYTGGII 231
Query: 305 EYVQWLNTDKKPLHDVVGFRKDVDGI-TIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
EYV+ +N K+PLH+ V + +DG I++A+Q+ +DAYS+ + +AN+I T++GG H+
Sbjct: 232 EYVKSMNKSKEPLHEDVIYFDKIDGTYDIEIAMQY-TDAYSENIYSFANNINTVEGGMHL 290
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
G K++LTR +N +K+ +K+KD + +GE +REGLT IISV++P+P++EGQTKT+LGN
Sbjct: 291 IGFKSALTRVINDYARKNNYLKEKDENFTGEDIREGLTAIISVKLPDPQYEGQTKTKLGN 350
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
P++R V+Q E + +LE +P I+ K + + +A AAKRARDL R+K +L S+S
Sbjct: 351 PQIRSSVEQVTVEEINIFLEENPACARIIMEKCMRSQRARQAAKRARDLTRRKGILESTS 410
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LPGKLADC P +SEIFIVEGDSAGGSAK+GR+ + Q I+ PL+ I
Sbjct: 411 LPGKLADCREKDPSKSEIFIVEGDSAGGSAKEGRNSQNQAIL-PLRGKIL 459
>gi|403382763|ref|ZP_10924820.1| DNA gyrase subunit B [Paenibacillus sp. JC66]
Length = 636
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 242/466 (51%), Positives = 322/466 (69%), Gaps = 13/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S TY QIQVLEGLEAVRKRP MYIGST +GLHHLV+E++DN++DEA AG+ I+V
Sbjct: 5 SHTYDENQIQVLEGLEAVRKRPGMYIGSTSSKGLHHLVWEVVDNSIDEALAGFCDRIDVI 64
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++V DNGRGIP+ ++ KS LE V+TVLHAGGKFGG GY VSGGLHGVG+
Sbjct: 65 IHKDNSITVIDNGRGIPVGMNTKLQKSTLEVVMTVLHAGGKFGGE--GYKVSGGLHGVGV 122
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE + V V RDG Y Q+Y RG P V V +R GT+ F PD ++F
Sbjct: 123 SVVNALSEHVIVQVSRDGKIYQQEYRRGIP----QYDVKVVGDTERTGTKTTFLPDPEIF 178
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
++++ + RIRELAFLN + I + E +D EKN + + GG++ +V++LN
Sbjct: 179 KETTVYEYDILQSRIRELAFLNKGIEINILDERTD-EKNSFK---YDGGIKSFVEYLNEK 234
Query: 314 KKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
++ LHD + + D I +++ALQ+ +D++++ + +AN+I T +GGTH G K++LTR
Sbjct: 235 REVLHDEPIYTEGTKDNIQVEIALQY-NDSFTENIYSFANNINTHEGGTHESGFKSALTR 293
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LN +KS ++KD D +L+G+ VREGLT IISV++P P+FEGQTKT+LGN EVR +V+
Sbjct: 294 ILNDYARKSNSIKDSDANLTGDDVREGLTAIISVKIPEPQFEGQTKTKLGNSEVRGIVES 353
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E L E+LE HP V I+ K + A +A AA++AR+L R+K+ L SSLPGKLADCS
Sbjct: 354 LFSEKLQEFLEEHPSVSRKIMEKGIQAARAREAARKARELTRRKNALEVSSLPGKLADCS 413
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S SEI+IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 414 SKDASISEIYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 458
>gi|452820768|gb|EME27806.1| DNA gyrase subunit B [Galdieria sulphuraria]
Length = 711
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 245/492 (49%), Positives = 335/492 (68%), Gaps = 33/492 (6%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ YG+ QI VL+GLE VRKRP MYIGSTG +GLH LV+E++DN+VDE+ AG+ + + V L
Sbjct: 43 QEYGASQISVLQGLEPVRKRPGMYIGSTGIQGLHQLVFELVDNSVDESIAGFCTKVTVVL 102
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
+D SVSV DNGRGIP+D+H + KSALETVLTVLHAGGKFG S GY VSGGLHGVGLS
Sbjct: 103 HSDKSVSVMDNGRGIPVDMHTTSGKSALETVLTVLHAGGKFG--SGGYHVSGGLHGVGLS 160
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKP-----VTTLTCHVLP----VDSKDR------ 239
VVNALSE L V V R+ Y Q++ RG P V +T +L + DR
Sbjct: 161 VVNALSERLYVGVVRNNQLYEQEFQRGIPLGPMQVCDMTSDLLMEREGIQQYDRGFLQQK 220
Query: 240 QGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE--- 296
GT++ F+PD +F ++ D + +A R ELA+LN L I L +E E + E
Sbjct: 221 SGTKVHFYPDPVIFGETLEMDASFLAKRFDELAYLNAGLQIILYREMHQIEVQESVENGS 280
Query: 297 ----------YFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDT 346
+ GG+ E+VQ+L+ +K+ +H+ V + + I ++ ALQW + YS+
Sbjct: 281 QSRKQIHPQVFIHQGGIREFVQFLSKEKQSMHETVYIHRRIKQIEMEAALQWNREQYSEI 340
Query: 347 MLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISV 406
+LG+ANSIR +DGG H+EG K+ LT+ + + KK T K++ +S +GE +REGL IISV
Sbjct: 341 ILGFANSIRNLDGGVHVEGFKSGLTKCFHQMAKK--TSKNETLSWNGELIREGLIGIISV 398
Query: 407 RVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAA 466
+VP PEF+GQTKT+LGNPE+R +V+Q + E + ++L+ +P+V ++L K +A +AA AA
Sbjct: 399 KVPEPEFQGQTKTKLGNPEIRGLVEQVIIEEVGDFLQTNPEVFQALLDKVNAAARAAEAA 458
Query: 467 KRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIIN 526
KRAR+L+R+KS L S++LPGKLADC++ P+E+E+FIVEGDSAGGSAKQGRDR FQ I+
Sbjct: 459 KRARELIRRKSALESAALPGKLADCATRNPDEAELFIVEGDSAGGSAKQGRDRSFQAIL- 517
Query: 527 PLQESIFAFASA 538
PL+ I A
Sbjct: 518 PLRGKILNVEKA 529
>gi|304315545|ref|YP_003850690.1| DNA gyrase subunit beta [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777047|gb|ADL67606.1| DNA gyrase, B subunit [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 633
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/465 (51%), Positives = 325/465 (69%), Gaps = 14/465 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+TYG+ QIQ+LEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AGY NI+V +
Sbjct: 5 ETYGASQIQILEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSIDEALAGYCKNIDVVI 64
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DNSVSV D+GRGIP D+HP T KS +E LTVLHAGGKF ++ Y VSGGLHGVGLS
Sbjct: 65 HKDNSVSVIDDGRGIPTDIHPQTGKSGVEVALTVLHAGGKF--NNDVYKVSGGLHGVGLS 122
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS+ LEV V ++G Y QKY RG P + L + D GT I F PD ++F
Sbjct: 123 VVNALSKRLEVIVKQNGKVYEQKYERGVPKSDLKI----IGDTDETGTTITFAPDDEIFE 178
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
T +++D++ ++ R+REL+FLN + I L E E + + + GG+ E+V++LN +K
Sbjct: 179 T-LEYDYDILSQRLRELSFLNKGVRIRLMDERDGKE----DVFHYEGGIVEFVKYLNRNK 233
Query: 315 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+ LH + + D +++A+Q+ +D+Y++ + +AN+I T +GGTH+ G KA+LT+
Sbjct: 234 EVLHPEPIYMESKSDTYEVEVAMQY-NDSYTENIFSFANNIDTREGGTHLIGFKAALTKV 292
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N +K +KD D +L GE VREGLT IISV++ NP+FEGQTKT+LGN E+R +VD
Sbjct: 293 INDYARKFNIIKDNDKNLQGEDVREGLTAIISVKLMNPQFEGQTKTKLGNSEMRSIVDSV 352
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
V E LT ++E +P + IL K+ SA +A AA++AR+L R+KS L S+SLPGKLADCS
Sbjct: 353 VTEKLTAFMEENPSLSKVILEKATSAARAREAARKARELTRRKSALESTSLPGKLADCSE 412
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
+ E+++VEGDSAGGSAK GRD R+Q I+ PL+ I A
Sbjct: 413 KDASKCELYLVEGDSAGGSAKMGRDSRYQAIL-PLRGKILNVEKA 456
>gi|292655722|ref|YP_003535619.1| DNA gyrase subunit B [Haloferax volcanii DS2]
gi|448289708|ref|ZP_21480871.1| DNA gyrase subunit B [Haloferax volcanii DS2]
gi|302425107|sp|D4GZ01.1|GYRB_HALVD RecName: Full=DNA gyrase subunit B
gi|291372625|gb|ADE04852.1| DNA gyrase subunit B [Haloferax volcanii DS2]
gi|445581225|gb|ELY35586.1| DNA gyrase subunit B [Haloferax volcanii DS2]
Length = 639
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 241/459 (52%), Positives = 317/459 (69%), Gaps = 11/459 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ IEVAL
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDAIEVALHE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSV DNGRGIP+D H ++ ALE ++TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVTDNGRGIPVDTHEQYDRPALEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS LEV V RDG + ++ G+P V ++ + GT IRFWPD +F T
Sbjct: 125 NALSSELEVEVKRDGAVWTHRFEVGEPQVEEFERVRDLEPGEDTGTTIRFWPDDGIFETT 184
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+FD T+ R+RELAFLN + I+L SD ++ + + F GG+ E+V++LN K
Sbjct: 185 -EFDFKTLENRLRELAFLNSGVEISL----SDERTDESSTFLFEGGIREFVEYLNETKTA 239
Query: 317 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LHD V+ + + +GI +++A+Q +D ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 240 LHDDVIYYDDESEGIEVEIAMQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVN 298
Query: 376 SLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
+ D D +L GE VREGLT +IS++ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 299 DYANTHDMLDDLDGDNLRGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESVT 358
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
+ L + E +PD +I+SK++ A +A AAK+A +L R+KS L S+SLPGKLADC S
Sbjct: 359 HQQLGTFFEENPDTATAIISKAVEAARARKAAKQAEELTRRKSALESTSLPGKLADCQSR 418
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P ESE+FIVEGDSAGGSAKQGRDR+FQ I+ PL+ I
Sbjct: 419 DPAESELFIVEGDSAGGSAKQGRDRKFQAIL-PLKGKIL 456
>gi|260887491|ref|ZP_05898754.1| DNA gyrase, B subunit [Selenomonas sputigena ATCC 35185]
gi|330837873|ref|YP_004412453.1| DNA gyrase, B subunit [Selenomonas sputigena ATCC 35185]
gi|260862778|gb|EEX77278.1| DNA gyrase, B subunit [Selenomonas sputigena ATCC 35185]
gi|329745637|gb|AEB98993.1| DNA gyrase, B subunit [Selenomonas sputigena ATCC 35185]
Length = 690
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/467 (50%), Positives = 324/467 (69%), Gaps = 14/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+ QIQ+LEGLEAVRKRP MYIGST RGLHHLVYE++DN++DEA AGY +I+V
Sbjct: 60 VDGDYGANQIQILEGLEAVRKRPGMYIGSTSERGLHHLVYEVVDNSIDEALAGYCDHIDV 119
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V DNGRGIP+D+H + K A+E VLTVLHAGGKFGG GY VSGGLHGVG
Sbjct: 120 TIEKDNSITVVDNGRGIPVDMHE-SGKPAVEVVLTVLHAGGKFGGE--GYKVSGGLHGVG 176
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS S++V V RDG + ++ +G LT + ++ GT++ F PD ++
Sbjct: 177 VSVVNALSTSMDVEVKRDGKIHSIRFEQGVTAAPLTV----IGETEKTGTKVHFVPDPEI 232
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FT Q+ +T+ R+RELAFLN +TI L + + + Y F+ GG+ +V+ LN
Sbjct: 233 FTVT-QYSFDTLKHRLRELAFLNQGITIRLVDKRGEGREESY---FYEGGIRSFVEHLNR 288
Query: 313 DKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
K+ +H + F D +++A+Q+ +D+Y + + + N+I T +GGTH+ G K +LT
Sbjct: 289 KKEVIHPTPIYFNGIKDDTVVEIAMQY-NDSYMENIYSFVNNINTEEGGTHLAGFKIALT 347
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R N +K +KDKD +LSGE VREGLTC+IS+++ P+FEGQTKT+LGN EVR +VD
Sbjct: 348 RAANDFARKQGILKDKDGNLSGEDVREGLTCVISLKIHEPQFEGQTKTKLGNSEVRGIVD 407
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E LTEY E +P + ++ K++ A +A AA++AR+L R+K+ L SSLPGKLADC
Sbjct: 408 SIVTEGLTEYFEENPAITKKVIEKAIMASRAREAARKARELTRRKNALEVSSLPGKLADC 467
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PE++EI++VEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 468 SIKDPEQAEIYLVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNVEKA 513
>gi|427406668|ref|ZP_18896873.1| DNA gyrase, B subunit [Selenomonas sp. F0473]
gi|425708098|gb|EKU71139.1| DNA gyrase, B subunit [Selenomonas sp. F0473]
Length = 684
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 243/467 (52%), Positives = 320/467 (68%), Gaps = 13/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLVYE++DNA+DEA AGY N+ V
Sbjct: 53 VDADYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVYEVVDNAIDEALAGYCDNVAV 112
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V DNGRGIP+D+H + A+E VLTVLHAGGKFGG GY VSGGLHGVG
Sbjct: 113 TIHKDNSITVVDNGRGIPVDMH-ESGMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVG 169
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS S++V V RDG Y ++RG L V + + GTR+ F PD ++
Sbjct: 170 VSVVNALSSSMDVQVRRDGRIYEISFARGNTTEKLR----EVGTSETTGTRVHFVPDPEI 225
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FT + T+ R+RELAFLN +TI L E + +++ + F GG+ +V LN
Sbjct: 226 FTVTT-YSFETLKHRLRELAFLNHGITITLTDERGEEPRSE--TFHFEGGIRSFVSHLNR 282
Query: 313 DKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
K+ +++ + F D +++A+Q+ +D+Y + + + N+I T +GGTH+ G K +LT
Sbjct: 283 KKETINEEPIYFNGVKDDTVVEIAMQY-NDSYQENIYSFVNNINTEEGGTHLAGFKIALT 341
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R N ++ +KDKD +LSGE VREGLTC+IS++V P+FEGQTKT+LGN EVR +VD
Sbjct: 342 RAANDFARRLSVLKDKDGNLSGEDVREGLTCVISLKVREPQFEGQTKTKLGNSEVRGIVD 401
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E LTEY E +P+V +L K+L A +A AA++AR+L R+K+ L SSLPGKLADC
Sbjct: 402 SIVTEGLTEYFEENPNVTKKVLDKALMASRAREAARKARELTRRKNALEVSSLPGKLADC 461
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P++ EI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 462 SVKDPDQCEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNVEKA 507
>gi|431792075|ref|YP_007218980.1| DNA gyrase subunit B [Desulfitobacterium dichloroeliminans LMG
P-21439]
gi|430782301|gb|AGA67584.1| DNA gyrase subunit B [Desulfitobacterium dichloroeliminans LMG
P-21439]
Length = 644
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 242/472 (51%), Positives = 326/472 (69%), Gaps = 12/472 (2%)
Query: 68 FKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYA 127
K N + Y + QI+VLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AGY
Sbjct: 7 LKVNMPNDDYNAGQIEVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSIDEALAGYC 66
Query: 128 SNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGG 187
I+V + +DNS+SV DNGRGIP+D+HP K A+E LTVLHAGGKF GS+ Y VSGG
Sbjct: 67 DTIDVTIHSDNSISVVDNGRGIPVDIHPKIGKPAVEVALTVLHAGGKFSGSA--YKVSGG 124
Query: 188 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 247
LHGVG+SVVNALS L V V +DG YHQ++ RGK + LT + DS + GT+I F
Sbjct: 125 LHGVGMSVVNALSTWLHVEVKKDGKVYHQEFMRGKTTSELTI-IGEADS-GKTGTKISFA 182
Query: 248 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 307
PD ++F I F + +A R+REL+FLN K+ I L E D ++ Y+ GG+ ++V
Sbjct: 183 PDPEIFE-EIVFQFDILAHRLRELSFLNKKVAITLIDEREDKKE----LYYHTGGIFDFV 237
Query: 308 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 366
+++N K+ LH + + F + DG+ +++ +Q+ +D Y + + YAN+I T +GGTH G
Sbjct: 238 KYINRSKEVLHPEPIYFEAEKDGVQVEICMQY-NDGYIENLFSYANNIHTQEGGTHESGF 296
Query: 367 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 426
KA+LTR +N +K+K +K+ D +L+GE +REGLT +ISV+VP P+FEGQTKT+LGN E+
Sbjct: 297 KAALTRVVNDYSRKNKILKENDANLTGEDIREGLTVVISVKVPEPQFEGQTKTKLGNSEI 356
Query: 427 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 486
R +VD E L+ +L +P ++ KSL A +A AA++AR+L R+KS L S+LPG
Sbjct: 357 RSIVDSITGEGLSVFLAENPATGKKVIEKSLQASRAREAARKARELTRRKSALEVSALPG 416
Query: 487 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
KLADCS E E++IVEGDSAGGSAK GRDRRFQ I+ P++ I A
Sbjct: 417 KLADCSWKEAELCEMYIVEGDSAGGSAKSGRDRRFQAIL-PIRGKILNVEKA 467
>gi|89892751|ref|YP_516238.1| DNA gyrase subunit B [Desulfitobacterium hafniense Y51]
gi|219666076|ref|YP_002456511.1| DNA gyrase subunit beta [Desulfitobacterium hafniense DCB-2]
gi|423075892|ref|ZP_17064606.1| DNA gyrase, B subunit [Desulfitobacterium hafniense DP7]
gi|89332199|dbj|BAE81794.1| DNA gyrase subunit B [Desulfitobacterium hafniense Y51]
gi|219536336|gb|ACL18075.1| DNA gyrase, B subunit [Desulfitobacterium hafniense DCB-2]
gi|361853120|gb|EHL05306.1| DNA gyrase, B subunit [Desulfitobacterium hafniense DP7]
Length = 644
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 242/472 (51%), Positives = 326/472 (69%), Gaps = 12/472 (2%)
Query: 68 FKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYA 127
KE + Y + QI+VLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AGY
Sbjct: 7 IKETIPTNDYNAGQIEVLEGLEAVRKRPGMYIGSTSLRGLHHLVYEIVDNSIDEALAGYC 66
Query: 128 SNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGG 187
IEV + DNS+SV DNGRGIP+D+HP K A+E LTVLHAGGKF GS+ Y VSGG
Sbjct: 67 DTIEVTIHKDNSISVVDNGRGIPVDIHPKLGKPAVEVALTVLHAGGKFSGSA--YKVSGG 124
Query: 188 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 247
LHGVG+SVVNALS L V V +DG YHQ++ RGK T L + VD ++ GT I F
Sbjct: 125 LHGVGMSVVNALSTWLHVEVRKDGNIYHQEFMRGKTKTELAV-IGQVDP-NQTGTTITFS 182
Query: 248 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 307
PD ++F + F +T+A R+REL+FLN K++I L D +++ Y+ GG+ ++V
Sbjct: 183 PDPEIFEDTV-FLFDTLAHRLRELSFLNKKVSITL----IDAREDKKEVYYHTGGIYDFV 237
Query: 308 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 366
+++N K+ LH + + F + DG+ +++++Q+ +D Y + + YAN+I T +GGTH G
Sbjct: 238 KYINRSKESLHPEPIYFEAEKDGVQVEVSMQY-NDGYVENLFSYANNIHTHEGGTHESGF 296
Query: 367 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 426
KA+LTR N +K+ +K + +LSGE +REGLT +ISV+VP P+FEGQTKT+LGN E+
Sbjct: 297 KAALTRVANDYARKNNILKANEANLSGEDIREGLTAVISVKVPEPQFEGQTKTKLGNSEI 356
Query: 427 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 486
R +VD E L+ + E +P + ++ KS+ A +A AA++AR+L R+KS L S+LPG
Sbjct: 357 RSIVDSITGEGLSAFFEENPAIGKKVIEKSIQASRAREAARKARELTRRKSALEVSALPG 416
Query: 487 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
KLADCS E E++IVEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 417 KLADCSWKEAELCEMYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNVEKA 467
>gi|452210943|ref|YP_007491057.1| DNA gyrase subunit B [Methanosarcina mazei Tuc01]
gi|452100845|gb|AGF97785.1| DNA gyrase subunit B [Methanosarcina mazei Tuc01]
Length = 634
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 246/460 (53%), Positives = 324/460 (70%), Gaps = 13/460 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y + IQVLEGLEAVRKRP+MYIGST RGLHHLVYE++DN++DEA AG+ S I+V +
Sbjct: 5 QVYDASHIQVLEGLEAVRKRPSMYIGSTDGRGLHHLVYEVVDNSIDEALAGFCSEIDVTI 64
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
+ SV+V DNGRGIPID HP KSALE V+T+LHAGGKF ++ Y VSGGLHGVG+S
Sbjct: 65 NPNGSVTVIDNGRGIPIDPHPVHKKSALEVVMTILHAGGKFDKNT--YKVSGGLHGVGVS 122
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALSE EV V RDG +Y Q+Y RGKP V + + D GT+ F PD ++F
Sbjct: 123 VVNALSEWTEVEVSRDGKKYFQRYIRGKP----ESDVREIGTSDTTGTKTTFKPDTKIFE 178
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
T F ++ + R+RELAFLN L I L K+ PE Q + ++GG+ E+V++LN K
Sbjct: 179 TT-DFQYDILLNRLRELAFLNRGLIINL-KDLRSPE-GQAETFNYSGGIIEFVEYLNKKK 235
Query: 315 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+PLH+ + F + D + +++A+Q+ ++ Y++ + +AN+I T +GGTHI G K +LTR
Sbjct: 236 QPLHEKPIYFERQRDDMVVEIAMQY-TNGYTENVYSFANNINTHEGGTHIIGFKTALTRV 294
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
N K +K K+ D L+G+ VREGLT IISV++ P+FEGQTKT+LGN EV+ +VD
Sbjct: 295 ANDYIKANKLSKE-DEKLTGDDVREGLTAIISVKLMEPQFEGQTKTKLGNSEVKGIVDSL 353
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
V + L EY E +P V + IL K+L A +A AAK+AR+L R+KSVL S+LPGKLADCS+
Sbjct: 354 VTDGLAEYFEENPKVANIILDKALLAQRAREAAKKARELTRRKSVLEVSTLPGKLADCSN 413
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P E EI+IVEGDSAGGSAKQGRDR FQ I+ PL+ I
Sbjct: 414 KNPAECEIYIVEGDSAGGSAKQGRDRSFQAIL-PLRGKIL 452
>gi|363890517|ref|ZP_09317846.1| DNA gyrase, B subunit [Eubacteriaceae bacterium CM5]
gi|361965108|gb|EHL18101.1| DNA gyrase, B subunit [Eubacteriaceae bacterium CM5]
Length = 641
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/470 (50%), Positives = 331/470 (70%), Gaps = 19/470 (4%)
Query: 70 ENPVSKT-YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
+N +++T YG+EQIQVLEGLE VRKRP MYIGSTG +GLHHLVYE++DNA+DEA AG+
Sbjct: 3 DNDINQTAYGAEQIQVLEGLEPVRKRPGMYIGSTGSKGLHHLVYEVVDNAIDEALAGFCD 62
Query: 129 NIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 188
I V++ +N ++V DNGRGIP+++HP T KS LETVLTVLHAGGKFG + GY VSGGL
Sbjct: 63 KIYVSIDVNNGITVIDNGRGIPVEVHPKTGKSTLETVLTVLHAGGKFG--AGGYKVSGGL 120
Query: 189 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTL----TCHVLPVDSKDRQGTRI 244
HGVG+SVVNALS+SL V ++G Y Q++ G VT + TC + + GT I
Sbjct: 121 HGVGVSVVNALSKSLTAVVKKEGKVYKQEFEYGNAVTDIKQIGTCPL------EETGTCI 174
Query: 245 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 304
F PD+++F + + T+ R+RELAFLN ++I L ED+ Y + GG+
Sbjct: 175 SFLPDEKIFDETV-YSFETLEHRLRELAFLNKGISITL--EDNRTSDKISKTYHYTGGII 231
Query: 305 EYVQWLNTDKKPLHDVVGFRKDVDGI-TIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
EYV+ +N K+PLH+ V + +DG I++A+Q+ +DAYS+ + +AN+I T++GG H+
Sbjct: 232 EYVKSMNKSKEPLHEDVIYFDKIDGTYDIEIAMQY-TDAYSENIYSFANNINTVEGGMHL 290
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
G K++LTR +N +K+ +K+KD + +GE +REGLT IISV++P+P++EGQTKT+LGN
Sbjct: 291 IGFKSALTRVINDYARKNNYLKEKDENFTGEDIREGLTAIISVKLPDPQYEGQTKTKLGN 350
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
P++R V+Q E + +LE +P I+ K + + +A AAKRARDL R+K +L S+S
Sbjct: 351 PQIRSSVEQVTVEEINIFLEENPACARIIMEKCMRSQRARQAAKRARDLTRRKGILESTS 410
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LPGKLADC P +SEIFIVEGDSAGGSAK+GR+ + Q I+ PL+ I
Sbjct: 411 LPGKLADCREKDPSKSEIFIVEGDSAGGSAKEGRNSQNQAIL-PLRGKIL 459
>gi|381163837|ref|ZP_09873067.1| DNA gyrase, B subunit [Saccharomonospora azurea NA-128]
gi|418459761|ref|ZP_13030872.1| DNA gyrase subunit B [Saccharomonospora azurea SZMC 14600]
gi|359740074|gb|EHK88923.1| DNA gyrase subunit B [Saccharomonospora azurea SZMC 14600]
gi|379255742|gb|EHY89668.1| DNA gyrase, B subunit [Saccharomonospora azurea NA-128]
Length = 655
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 230/473 (48%), Positives = 321/473 (67%), Gaps = 21/473 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + I VLEGLEAVRKRP MYIGSTG RGLHHL+ E++DN+VDEA AGYAS +EV LLA
Sbjct: 9 YSASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIQEVVDNSVDEAMAGYASRVEVTLLA 68
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D V V D+GRGIP+D+HP K +E VLT LHAGGKF S Y+VSGGLHGVG+SVV
Sbjct: 69 DGGVRVVDDGRGIPVDIHPVHGKPTVEIVLTQLHAGGKF--DSESYAVSGGLHGVGVSVV 126
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS +L+V V RDG + Q Y + P ++ +R GT + FW D +F T
Sbjct: 127 NALSTALDVEVHRDGRIWVQHYEKSVP-----GDLIDKGPTERTGTSVTFWADPDIFETT 181
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKE--------DSDPEKNQYNE--YFFAGGLEEY 306
++ T+A R++E+AFLN LTI LR E D+ E+ E Y++ GGL+++
Sbjct: 182 -EYSAETVARRLQEMAFLNKGLTIVLRDERVADEADEDATGERAGIKERTYYYPGGLQDF 240
Query: 307 VQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 365
V ++N K P+H V+GF + +G+ +++A+QW S +++ ++ +AN+I T +GGTH EG
Sbjct: 241 VAYINASKDPIHPSVIGFEQKGEGLEVEVAMQWNS-SFTPSVYTFANTINTHEGGTHEEG 299
Query: 366 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 425
+A+LTR +N+ + K +K+KD +L+G+ VREGL I+S+++ P+FEGQTKT+LGN E
Sbjct: 300 FRAALTRVVNAYARDKKLLKEKDANLTGDDVREGLAAIVSIKLAEPQFEGQTKTKLGNSE 359
Query: 426 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 485
R V + E+L ++ E +P I++K++S+ +A LAA++ARDLVR+K + LP
Sbjct: 360 ARSFVQTTCNEWLADWFERNPAEAKIIINKAVSSSQARLAARKARDLVRRKGAMDIGGLP 419
Query: 486 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
GKL DC S PEE E++IVEGDSAGGSAK+GRD R+Q I+ P++ I A
Sbjct: 420 GKLKDCRSRDPEECELYIVEGDSAGGSAKEGRDSRYQAIL-PIRGKIINVEKA 471
>gi|125974861|ref|YP_001038771.1| DNA gyrase subunit B [Clostridium thermocellum ATCC 27405]
gi|256003883|ref|ZP_05428870.1| DNA gyrase, B subunit [Clostridium thermocellum DSM 2360]
gi|281418684|ref|ZP_06249703.1| DNA gyrase, B subunit [Clostridium thermocellum JW20]
gi|385777392|ref|YP_005686557.1| DNA gyrase subunit B [Clostridium thermocellum DSM 1313]
gi|419721172|ref|ZP_14248363.1| DNA gyrase, B subunit [Clostridium thermocellum AD2]
gi|419726568|ref|ZP_14253590.1| DNA gyrase, B subunit [Clostridium thermocellum YS]
gi|125715086|gb|ABN53578.1| DNA gyrase, B subunit [Clostridium thermocellum ATCC 27405]
gi|255992221|gb|EEU02316.1| DNA gyrase, B subunit [Clostridium thermocellum DSM 2360]
gi|281407768|gb|EFB38027.1| DNA gyrase, B subunit [Clostridium thermocellum JW20]
gi|316939072|gb|ADU73106.1| DNA gyrase, B subunit [Clostridium thermocellum DSM 1313]
gi|380770165|gb|EIC04063.1| DNA gyrase, B subunit [Clostridium thermocellum YS]
gi|380782872|gb|EIC12479.1| DNA gyrase, B subunit [Clostridium thermocellum AD2]
Length = 641
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 237/458 (51%), Positives = 313/458 (68%), Gaps = 11/458 (2%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
N +SK Y IQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AG+ + I
Sbjct: 6 NEMSK-YDESNIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIMDNSIDEALAGFCNEI 64
Query: 131 EVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 190
+V + DNS++ DNGRGIP+ +HP S +E V T+LHAGGKF G GY VSGGLHG
Sbjct: 65 KVIIHKDNSITNIDNGRGIPVGIHPKLGISTVEVVHTILHAGGKFDGQ--GYKVSGGLHG 122
Query: 191 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 250
VG SVVNALSE LEV V+RDG Y Q+Y RGKPVT + + + GT+ F PD
Sbjct: 123 VGASVVNALSEFLEVEVFRDGHIYRQRYERGKPVTPVEI----IGDTNLTGTKTTFKPDP 178
Query: 251 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWL 310
++F +FD + R+RELAFLN L I LR D PE+ + GG+ +V+++
Sbjct: 179 EIFEVT-EFDFEVLLTRLRELAFLNKGLKIILR--DERPEEPVEKHLHYEGGIVSFVEYM 235
Query: 311 NTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 370
+ +K PLH+ + F DG +++A+Q+ D Y + + +AN+I T +GGTH+ G K ++
Sbjct: 236 DRNKDPLHEPIYFDGYKDGCYVEIAMQYNKDVYVENIHSFANNISTAEGGTHLTGFKTAI 295
Query: 371 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
T+ LN KK +K+ D +L GE VREGLT +ISV++P+P+FEGQTKT+LGN EVR V
Sbjct: 296 TKVLNDYAKKFNFLKENDKNLLGEDVREGLTAVISVKIPDPQFEGQTKTKLGNSEVRSFV 355
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
+ + E +LE +P V IL K + + +A AA++AR+L R+K+VL +S+LPGKLAD
Sbjct: 356 ESIINEKFASFLEENPSVTRLILDKCIMSARAREAARKARELTRRKNVLETSTLPGKLAD 415
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPL 528
C+ P EIFIVEGDSAGGSAKQGR+RRFQ I+ PL
Sbjct: 416 CTERDPSLCEIFIVEGDSAGGSAKQGRNRRFQAIL-PL 452
>gi|402814456|ref|ZP_10864050.1| DNA gyrase subunit B [Paenibacillus alvei DSM 29]
gi|402508303|gb|EJW18824.1| DNA gyrase subunit B [Paenibacillus alvei DSM 29]
Length = 636
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/459 (52%), Positives = 317/459 (69%), Gaps = 13/459 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
TY QIQVLEGLEAVRKRP MYIGST +GLHHLV+E++DN++DEA AGY + IEV +
Sbjct: 7 TYDESQIQVLEGLEAVRKRPGMYIGSTSAKGLHHLVWEVVDNSIDEALAGYCTKIEVTVH 66
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+ + + A+E V+TVLHAGGKFGG GY VSGGLHGVG+SV
Sbjct: 67 EDNSITVVDNGRGIPVGIQEKMKRPAVEVVMTVLHAGGKFGGE--GYKVSGGLHGVGVSV 124
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS SL VTV RDG + Q+Y RG P L + + GT IRF PD +VFT
Sbjct: 125 VNALSTSLVVTVKRDGHIHQQEYRRGVPQADLEI----IGDTEETGTTIRFQPDPEVFTE 180
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
++D++T+ RIRELAFLN + + L +D Q + + GG++E+V++LN +++
Sbjct: 181 TTEYDYDTLLSRIRELAFLNKGIQMVL----TDERTGQSETFKYDGGIKEFVEYLNRNRE 236
Query: 316 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+H+ + D IT ++ALQ+ +D+Y++ + +AN+I T +GGTH G K++LTR +
Sbjct: 237 KMHEQPIYVEGSKDYITCEVALQY-NDSYTENIYSFANNIHTHEGGTHESGFKSALTRII 295
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +K +KD + +LSG+ VREGLT IISV++P P+FEGQTKT+LGN EVR +V+
Sbjct: 296 NDYARKMNLMKDNNSNLSGDDVREGLTAIISVKIPEPQFEGQTKTKLGNSEVRSIVESVF 355
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E E+L +P V I+ K + A +A AA+RAR+L R+KS L SSLPGKLADCSS
Sbjct: 356 SEKFMEFLNENPMVSKKIVEKGMQASRAREAARRARELTRRKSALEVSSLPGKLADCSSK 415
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
E+FIVEGDSAGGSAKQGRDR FQ I+ PL+ I
Sbjct: 416 DAAHCELFIVEGDSAGGSAKQGRDRHFQAIL-PLKGKIL 453
>gi|193215259|ref|YP_001996458.1| DNA gyrase subunit B [Chloroherpeton thalassium ATCC 35110]
gi|193088736|gb|ACF14011.1| DNA gyrase, B subunit [Chloroherpeton thalassium ATCC 35110]
Length = 644
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/475 (49%), Positives = 318/475 (66%), Gaps = 14/475 (2%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
+E KE S YG+ IQVL+G+E VR+RPAMYIG G RGLHHLVYEI+DN+VDEA
Sbjct: 2 SEEVKEIEKSLEYGASNIQVLDGIEHVRRRPAMYIGDVGVRGLHHLVYEIVDNSVDEALG 61
Query: 125 GYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 184
GY I V + ++ S+ V D GRGIP D+HP N SAL+ V+TV+ AGGKF Y V
Sbjct: 62 GYNDYIFVQIKSNGSILVRDKGRGIPTDIHPQKNTSALQLVMTVIGAGGKF--DKGAYKV 119
Query: 185 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 244
SGGLHGVG SVVNALSE EV V+R+G + Q Y +G P ++ + + GT+
Sbjct: 120 SGGLHGVGASVVNALSEWCEVEVYREGKIFFQGYEKGIPKAPVSV----IGTTSENGTKT 175
Query: 245 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 304
F PD+ +F +F ++T+A R+RELA+LN LTI + D + +E+ F GG++
Sbjct: 176 TFLPDESIFKNR-EFRYDTLADRMRELAYLNKNLTIVI----EDERDGRRDEFHFKGGIQ 230
Query: 305 EYVQWLNTDK-KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
E+V ++++ + K + + + F + DG +++A Q+ +D+Y + Y N+I T +GGTH+
Sbjct: 231 EFVTFMDSTRLKLIKEPIYFEGEKDGTVVEIAFQY-NDSYQENAFSYVNNINTHEGGTHV 289
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
G + +LTRTLN G+K+ K+ ISL+GE REGLT I+SV+VP P+FEGQTKT+LGN
Sbjct: 290 TGFRKALTRTLNYYGQKNDLFKNLKISLTGEDFREGLTAILSVKVPEPQFEGQTKTKLGN 349
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
E + +V+ V E L EY+E HP+ + IL K +SA A AA++A+DL R+KS L SSS
Sbjct: 350 SETQSIVESIVNEKLAEYIEQHPNEVKIILEKVVSAAIARDAARKAKDLTRRKSALESSS 409
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKLADCS PE E++IVEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 410 LPGKLADCSINDPEHCELYIVEGDSAGGSAKQGRDRRFQAIL-PLKGKILNVEKA 463
>gi|333895870|ref|YP_004469744.1| DNA topoisomerase IV subunit B [Thermoanaerobacterium xylanolyticum
LX-11]
gi|333111135|gb|AEF16072.1| DNA topoisomerase IV, B subunit [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 633
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/465 (51%), Positives = 326/465 (70%), Gaps = 14/465 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+TYG+ QIQ+LEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AGY NI+V +
Sbjct: 5 ETYGASQIQILEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSIDEALAGYCKNIDVII 64
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DNSVSV D+GRGIP D+HP T KS +E LTVLHAGGKF ++ Y VSGGLHGVGLS
Sbjct: 65 HKDNSVSVIDDGRGIPTDIHPQTGKSGVEVALTVLHAGGKF--NNDVYKVSGGLHGVGLS 122
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS++LEV V ++G Y QKY RG P T LT + D GT I F PD ++F
Sbjct: 123 VVNALSKNLEVIVKQNGKVYQQKYERGVPKTDLTV----IGETDETGTTITFSPDGEIFE 178
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
T +++D++ ++ R+REL+FLN + I L E E + + + GG+ E+V++LN +K
Sbjct: 179 T-LEYDYDVLSQRLRELSFLNKGVKIRLVDERDGKE----DVFHYEGGIVEFVKYLNRNK 233
Query: 315 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+ LH + + D +++A+Q+ +D+Y++ + +AN+I T +GGTH+ G K +LT+
Sbjct: 234 EVLHPEPIYMESKSDTYEVEVAMQY-NDSYTENIFSFANNIDTREGGTHLIGFKTALTKV 292
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N +K +K+ D +L GE VREGLT IISV++ NP+FEGQTKT+LGN E+R +VD
Sbjct: 293 INDYARKFNIIKENDKNLQGEDVREGLTAIISVKLMNPQFEGQTKTKLGNSEMRSIVDSV 352
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
V E LT ++E +P + IL K+ SA +A AA++AR+L R+KS L S+SLPGKLADCS
Sbjct: 353 VTEKLTAFMEENPSLSKVILEKATSAARAREAARKARELTRRKSALESTSLPGKLADCSE 412
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
+ E+++VEGDSAGGSAK GRD ++Q I+ PL+ I A
Sbjct: 413 KDASKCELYLVEGDSAGGSAKMGRDSKYQAIL-PLRGKILNVEKA 456
>gi|404393691|ref|ZP_09319331.2| DNA gyrase, B subunit [Eubacteriaceae bacterium CM2]
gi|404278784|gb|EHL17450.2| DNA gyrase, B subunit [Eubacteriaceae bacterium CM2]
Length = 641
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/470 (50%), Positives = 331/470 (70%), Gaps = 19/470 (4%)
Query: 70 ENPVSKT-YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
+N +++T YG+EQIQVLEGLE VRKRP MYIGSTG +GLHHLVYE++DNA+DEA AG+
Sbjct: 3 DNDINQTAYGAEQIQVLEGLEPVRKRPGMYIGSTGSKGLHHLVYEVVDNAIDEALAGFCD 62
Query: 129 NIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 188
I V++ +N ++V DNGRGIP+++HP T KS LETVLTVLHAGGKFG + GY VSGGL
Sbjct: 63 KIYVSIDVNNGITVIDNGRGIPVEVHPKTGKSTLETVLTVLHAGGKFG--AGGYKVSGGL 120
Query: 189 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTL----TCHVLPVDSKDRQGTRI 244
HGVG+SVVNALS+SL V ++G Y Q++ G VT + TC + + GT I
Sbjct: 121 HGVGVSVVNALSKSLTAVVKKEGKIYKQEFEYGNAVTDIKQIGTCPL------EETGTCI 174
Query: 245 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 304
F PD+++F I + T+ R+RELAFLN ++I L ED+ Y + GG+
Sbjct: 175 SFLPDEKIFDETI-YSFETLEHRLRELAFLNKGISITL--EDNRTSDKISKTYHYTGGII 231
Query: 305 EYVQWLNTDKKPLHDVVGFRKDVDGI-TIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
EYV+ +N K+PLH+ V + +DG I++A+Q+ +DAYS+ + +AN+I T++GG H+
Sbjct: 232 EYVKSMNKSKEPLHEDVIYFDKIDGTYDIEIAMQY-TDAYSENIYSFANNINTVEGGMHL 290
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
G K++LTR +N +K+ +K+KD + +GE +REGLT IISV++P+P++EGQTKT+LGN
Sbjct: 291 IGFKSALTRVINDYARKNNYLKEKDENFTGEDIREGLTAIISVKLPDPQYEGQTKTKLGN 350
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
P++R V+Q E + +LE +P I+ K + + +A AAKRARDL R+K +L S+S
Sbjct: 351 PQIRSSVEQVTVEEINIFLEENPACARIIMEKCMRSQRARQAAKRARDLTRRKGILESTS 410
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LPGKLADC P +SEIFIVEGDSAGGSAK+GR+ + Q I+ PL+ I
Sbjct: 411 LPGKLADCREKDPSKSEIFIVEGDSAGGSAKEGRNSQNQAIL-PLRGKIL 459
>gi|390933679|ref|YP_006391184.1| DNA topoisomerase IV subunit B [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389569180|gb|AFK85585.1| DNA topoisomerase IV, B subunit [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 633
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/465 (51%), Positives = 324/465 (69%), Gaps = 14/465 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+TYG+ QIQ+LEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AGY NI+V +
Sbjct: 5 ETYGASQIQILEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSIDEALAGYCKNIDVII 64
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DNSVSV D+GRGIP D+HP T KS +E LTVLHAGGKF ++ Y VSGGLHGVGLS
Sbjct: 65 HKDNSVSVIDDGRGIPTDIHPQTGKSGVEVALTVLHAGGKF--NNDVYKVSGGLHGVGLS 122
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS+ LEV V ++G Y QKY RG P T LT + D GT I F PD ++F
Sbjct: 123 VVNALSKKLEVIVKQNGKVYQQKYERGVPKTDLTV----IGETDETGTTITFSPDGEIFE 178
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
T +++D++ ++ R+REL+FLN + I L E E + + + GG+ E+V++LN +K
Sbjct: 179 T-LEYDYDVLSQRLRELSFLNKGVKIRLVDERDGKE----DVFHYEGGVVEFVKYLNRNK 233
Query: 315 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+ LH + + D +++A+Q+ +D Y++ + +AN+I T +GGTH+ G K +LT+
Sbjct: 234 EVLHPEPIYMESKSDTYEVEVAMQY-NDTYTENIFSFANNIDTREGGTHLIGFKTALTKV 292
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N +K +K+ D +L GE VREGLT IISV++ NP+FEGQTKT+LGN E+R +VD
Sbjct: 293 INDYARKFNIIKENDKNLQGEDVREGLTAIISVKLMNPQFEGQTKTKLGNSEMRSIVDSV 352
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
V E LT ++E +P + IL K+ SA +A AA++AR+L R+KS L S+SLPGKLADCS
Sbjct: 353 VTEKLTAFMEENPSLSKVILEKATSAARAREAARKARELTRRKSALESTSLPGKLADCSE 412
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
+ E+++VEGDSAGGSAK GRD R+Q I+ PL+ I A
Sbjct: 413 KDASKCELYLVEGDSAGGSAKMGRDSRYQAIL-PLRGKILNVEKA 456
>gi|448540821|ref|ZP_21623742.1| DNA gyrase subunit B [Haloferax sp. ATCC BAA-646]
gi|448549124|ref|ZP_21627900.1| DNA gyrase subunit B [Haloferax sp. ATCC BAA-645]
gi|448555702|ref|ZP_21631631.1| DNA gyrase subunit B [Haloferax sp. ATCC BAA-644]
gi|445708974|gb|ELZ60809.1| DNA gyrase subunit B [Haloferax sp. ATCC BAA-646]
gi|445713813|gb|ELZ65588.1| DNA gyrase subunit B [Haloferax sp. ATCC BAA-645]
gi|445717225|gb|ELZ68943.1| DNA gyrase subunit B [Haloferax sp. ATCC BAA-644]
Length = 639
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 242/459 (52%), Positives = 317/459 (69%), Gaps = 11/459 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ IEVAL
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDAIEVALHE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSV DNGRGIP+D H ++ ALE ++TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVTDNGRGIPVDTHEQYDRPALEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS LEV V RDG + ++ G+P V ++ + GT IRFWPD +F T
Sbjct: 125 NALSSELEVEVKRDGAVWTHRFELGEPQVEEFERVRDLEPGEDTGTTIRFWPDDGIFETT 184
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+FD T+ R+RELAFLN + I+L E +D + + + F GG+ E+V++LN K
Sbjct: 185 -EFDFKTLENRLRELAFLNSGVEISLTDERTD----ESSTFRFEGGIREFVEYLNETKTA 239
Query: 317 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LHD V+ + + +GI +++A+Q +D ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 240 LHDNVIYYDDESEGIEVEIAMQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVN 298
Query: 376 SLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
+ D D +L GE VREGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 299 DYANTHDMLDDLDGDNLRGEDVREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESVT 358
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
+ L + E +PD +I+SK++ A +A AAK+A +L R+KS L S+SLPGKLADC S
Sbjct: 359 HQQLGTFFEENPDTATAIISKAVEAARARKAAKQAEELTRRKSALESTSLPGKLADCQSR 418
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P ESE+FIVEGDSAGGSAKQGRDR+FQ I+ PL+ I
Sbjct: 419 DPSESELFIVEGDSAGGSAKQGRDRKFQAIL-PLKGKIL 456
>gi|375092762|ref|ZP_09739027.1| DNA gyrase, B subunit [Saccharomonospora marina XMU15]
gi|374653495|gb|EHR48328.1| DNA gyrase, B subunit [Saccharomonospora marina XMU15]
Length = 654
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 231/473 (48%), Positives = 319/473 (67%), Gaps = 21/473 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + I VLEGLEAVRKRP MYIGSTG RGLHHL++E++DNAVDEA AG+AS +EV LLA
Sbjct: 8 YNASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAGFASRVEVTLLA 67
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D V V D+GRGIP+D+HP K LE VLT LHAGGKF S Y+VSGGLHGVG+SVV
Sbjct: 68 DGGVRVVDDGRGIPVDIHPVHGKPTLEIVLTQLHAGGKF--DSESYAVSGGLHGVGVSVV 125
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS +L+V + G + Q Y P +L D+ GT + FW D +F T
Sbjct: 126 NALSSALDVEIHVGGKIWAQHYDHSVP-----GELLEKGPTDQTGTTVTFWADPNIFETT 180
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKE--------DSDPEKNQYNE--YFFAGGLEEY 306
+ T+A R++E+AFLN LT+ LR E D+ ++ Q E Y++ GGLE++
Sbjct: 181 Y-YSAETVARRLQEMAFLNKGLTMVLRDERVSDDNGEDASGQRAQITERTYYYPGGLEDF 239
Query: 307 VQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 365
V+ +N K+P+H VV F DG+ +++A+QW ++ ++ ++ +AN+I T +GGTH EG
Sbjct: 240 VKHINGSKEPIHPSVVSFEAKGDGLEVEVAMQW-NNGFTPSVYTFANTINTHEGGTHEEG 298
Query: 366 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 425
+A+LTR +NS ++ K +K+KD +L+G+ VREGL I+S+++ P+FEGQTKT+LGN E
Sbjct: 299 FRAALTRVVNSYAREKKLLKEKDANLTGDDVREGLAAIVSIKLAEPQFEGQTKTKLGNSE 358
Query: 426 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 485
R V + E+L ++ E +P I++K++S+ A +AA++ARDLVR+K + LP
Sbjct: 359 ARSFVQTTCNEWLADWFERNPSEARIIINKAVSSAHARMAARKARDLVRRKGAMDIGGLP 418
Query: 486 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
GKL DC ST PEE E++IVEGDSAGGSAK+GRD RFQ I+ P++ I A
Sbjct: 419 GKLKDCRSTDPEECELYIVEGDSAGGSAKEGRDSRFQAIL-PIRGKIINVEKA 470
>gi|169830224|ref|YP_001716206.1| DNA gyrase subunit B [Candidatus Desulforudis audaxviator MP104C]
gi|169637068|gb|ACA58574.1| DNA gyrase, B subunit [Candidatus Desulforudis audaxviator MP104C]
Length = 635
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 237/458 (51%), Positives = 324/458 (70%), Gaps = 15/458 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +E IQVLEGLEAVRKRP MYIGSTGP+GLHHL++E++DN++DEA AG+ IEV + A
Sbjct: 8 YRAEDIQVLEGLEAVRKRPGMYIGSTGPKGLHHLIFEVVDNSIDEALAGFCDYIEVVIHA 67
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNSV+V+DNGRGIP+D+HP + ALE VLT LHAGGKFGG+ Y +SGGLHGVG+SVV
Sbjct: 68 DNSVTVSDNGRGIPVDIHPQVGRPALEVVLTRLHAGGKFGGTQ--YKISGGLHGVGVSVV 125
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS +EV V R+G Y Q++ RG L +D D GTR+ F PD +F
Sbjct: 126 NALSRRMEVEVKREGYRYRQEFERGLATGELEL----LDEADETGTRVTFIPDPDIFEE- 180
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
++F ++ +A R+REL+FLN +T+ LR E + +K Y +AGG+ ++V+ LN K+
Sbjct: 181 VEFQYDVVAKRLRELSFLNAGVTLVLRDERTGRDKV----YQYAGGIRDFVRHLNLHKEV 236
Query: 317 L-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
L D + +G+ +++A+Q+ ++ + + YAN+I T+DGGTH G K++LTRT+N
Sbjct: 237 LPADPIYVEDHKNGVWVEVAVQYVVNSDRELIFSYANTIHTVDGGTHEAGFKSALTRTIN 296
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+K VK+ SLSGE +REGLT +I+V+VP P+FEGQTKT+LGN EVR +VD V
Sbjct: 297 DYARKYNLVKND--SLSGEDIREGLTAVINVKVPEPQFEGQTKTKLGNSEVRGLVDWVVS 354
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
+ L YLE HP I+ +++ A +A AA+RAR+L ++KS+L S++LPGKLADCS
Sbjct: 355 QRLAAYLEEHPTEARQIVQRAVVASRAREAARRARELTKRKSLLESATLPGKLADCSRRD 414
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P+ SE+++VEGDSAGGSAKQGRDR FQ I+ PL+ I
Sbjct: 415 PQHSELYLVEGDSAGGSAKQGRDREFQAIL-PLRGKIL 451
>gi|386391078|ref|ZP_10075859.1| DNA gyrase, B subunit [Desulfovibrio sp. U5L]
gi|385731956|gb|EIG52154.1| DNA gyrase, B subunit [Desulfovibrio sp. U5L]
Length = 806
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/459 (51%), Positives = 320/459 (69%), Gaps = 13/459 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y + I VLEGL AVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY I VA+
Sbjct: 10 QAYDASSITVLEGLSAVRKRPAMYIGSTDIRGLHHLVYEVVDNSIDEAMAGYCDRINVAI 69
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DNSV+V+DNGRGIP+D+HP ++ A+E V+TVLHAGGKF + Y VSGGLHGVG+S
Sbjct: 70 HLDNSVTVSDNGRGIPVDMHPKEHRPAVEVVMTVLHAGGKFDNDT--YKVSGGLHGVGVS 127
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALSE LEVTV R+G +Y Q+Y RG PVT +T + + GT IRF PD+++F
Sbjct: 128 VVNALSEYLEVTVRRNGKKYQQRYERGAPVTQVTV----IGEAENTGTTIRFKPDEEIFE 183
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
T QF H T+A R ELA+LN L I R D ++ Y F GG++ +V LN +
Sbjct: 184 TN-QFSHETLAKRFEELAYLNRGLEIDFR----DDRTSERVTYRFDGGIKRFVADLNAGE 238
Query: 315 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+HD++ ++DG+ +D ALQ+ ++ Y + + +AN+IRT +GGTH+ G K +LTR +
Sbjct: 239 PVIHDIIEGLAEMDGVVVDFALQYNAN-YKEEVYTFANNIRTREGGTHLAGFKTALTRGI 297
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N+ +K+ K L+G+ VREGLT +ISV++PNP+FEGQTKT+LGN +V +V + V
Sbjct: 298 NTYIEKADIPKKFKQKLTGDDVREGLTAVISVKLPNPQFEGQTKTKLGNSDVVGIVSKIV 357
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E + + E +P +I+ K++ A +A AA++A++LVR+K L SLPGKLADC S
Sbjct: 358 FEAINVHFEENPKDAKAIVEKAVDAARAREAARKAKELVRRKGALSDHSLPGKLADCQSK 417
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
PEESE++IVEGDSAGGSAKQGRD RFQ I+ PL+ I
Sbjct: 418 NPEESELYIVEGDSAGGSAKQGRDPRFQAIL-PLRGKIL 455
>gi|373456034|ref|ZP_09547845.1| DNA gyrase, B subunit [Dialister succinatiphilus YIT 11850]
gi|371934284|gb|EHO62082.1| DNA gyrase, B subunit [Dialister succinatiphilus YIT 11850]
Length = 649
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 246/464 (53%), Positives = 323/464 (69%), Gaps = 14/464 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG++ I+VLEGLEAVR RP MYIGST RGLHHLVYE++DN++DEA AGY ++IEV L
Sbjct: 21 YGAKDIRVLEGLEAVRLRPGMYIGSTSARGLHHLVYEVVDNSIDEALAGYCTHIEVTLND 80
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D S +V DNGRGIP +H T K A+E VLTVLHAGGKFGG GY +SGGLHGVG+SVV
Sbjct: 81 DGSCTVTDNGRGIPTGMHE-TGKPAMEVVLTVLHAGGKFGGD--GYPISGGLHGVGISVV 137
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE ++V V R+G + K SRG +T H+ D GT + F PD Q+F
Sbjct: 138 NALSEWMKVVVRREGHFHEMKLSRGD----VTEHMRTYGETDETGTSVTFKPDIQIFKEG 193
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
I FD+ T+ R+RELAFLN LTI L ++ D +Q + + +AGG+ E+VQ+LN + K
Sbjct: 194 IDFDYETLKIRMRELAFLNKGLTITL-TDNRDGATHQ-DVFHYAGGITEFVQFLN-EGKD 250
Query: 317 LHD--VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
L D V+ F + D + +D+A+Q+ + YS+ M + N I T++GG H+ G + +LTR L
Sbjct: 251 LVDPAVIAFEGEKDKVIVDIAMQYQT-GYSENMYTFVNDINTVEGGMHLAGFRTALTRVL 309
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +KS +K + +LSG+ VREGLTC+ISV+VPNP+FEGQTKT+LGN EV+ +VD V
Sbjct: 310 NDYARKSGILKQNEDNLSGDDVREGLTCVISVKVPNPQFEGQTKTKLGNLEVKSIVDNIV 369
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E L YLE HP +I+ K ++A +A AA+RAR+L R+K+ L SSLPGKLADC+
Sbjct: 370 SEGLKTYLEEHPQEARAIVEKGITASRAREAARRARELTRRKNALEVSSLPGKLADCTEK 429
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P+ +EI+IVEGDSAGGSAK GRDRR+Q I+ PL+ I A
Sbjct: 430 DPKFTEIYIVEGDSAGGSAKSGRDRRYQAIL-PLRGKILNVEKA 472
>gi|336477181|ref|YP_004616322.1| DNA gyrase subunit B [Methanosalsum zhilinae DSM 4017]
gi|335930562|gb|AEH61103.1| DNA gyrase, B subunit [Methanosalsum zhilinae DSM 4017]
Length = 634
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/450 (51%), Positives = 316/450 (70%), Gaps = 12/450 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRP+MYIGS RGLHHLVYE++DN++DEA AG+ ++I+V +
Sbjct: 7 YDATNIQVLEGLEAVRKRPSMYIGSVDSRGLHHLVYEVVDNSIDEALAGFCTSIDVIINP 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV++ DNGRGIP+D HP KSALE V+T+LHAGGKF S+ Y VSGGLHGVG+SVV
Sbjct: 67 DGSVTIIDNGRGIPVDTHPKYGKSALEVVMTILHAGGKFDKST--YKVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE + V V R+G Y QKY RG P + + D GT I+F PD +F
Sbjct: 125 NALSEWMIVEVKRNGKHYLQKYKRGIPEEDVAL----IGEADGSGTIIKFKPDSTIFE-E 179
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+ + ++T++ R+RELAFLN + I++ SD E + +Y GG+ +V LN +++
Sbjct: 180 LDYSYDTLSSRLRELAFLNKGIRISIGDRRSDEESKETFQY--EGGIRSFVDHLNKNRQT 237
Query: 317 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LHD + ++ D I +++A+Q+ +D Y++ + +AN+I T +GGTH+ G K++LTR N
Sbjct: 238 LHDDPIYLEREKDNIMVEIAMQY-TDTYAEHVYSFANNINTHEGGTHLIGFKSALTRVTN 296
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
KK+ KD D LSGE VREGLT IISV++P P+FEGQTKTRLGN E++ +V+ V
Sbjct: 297 DYIKKNNLTKD-DSKLSGEDVREGLTAIISVKIPEPQFEGQTKTRLGNSELKGIVESLVS 355
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L+++ E +P + + I+ KSLSA +A AAK+AR+L R+KS L S+LPGKLADCS
Sbjct: 356 ESLSDFFEENPKIANQIIQKSLSAKRAREAAKKARELTRRKSALEVSTLPGKLADCSEKD 415
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVII 525
P SE+++VEGDSAGGSAKQGR+R FQ I+
Sbjct: 416 PSVSELYLVEGDSAGGSAKQGRNRAFQAIL 445
>gi|430751860|ref|YP_007214768.1| DNA gyrase subunit B [Thermobacillus composti KWC4]
gi|430735825|gb|AGA59770.1| DNA gyrase, B subunit [Thermobacillus composti KWC4]
Length = 636
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 244/466 (52%), Positives = 320/466 (68%), Gaps = 19/466 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AG+ IEV +
Sbjct: 8 YDESQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVWEIVDNSIDEALAGFCDYIEVVIRQ 67
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV+V DNGRGIP+ HP + LE VLTVLHAGGKFGG GY VSGGLHGVG+SVV
Sbjct: 68 DGSVTVIDNGRGIPVGEHPKMKRPTLEVVLTVLHAGGKFGGE--GYKVSGGLHGVGVSVV 125
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE L V V RDG + Q+Y RG P+ + V D GT I F PD ++FT
Sbjct: 126 NALSEHLCVEVKRDGHIHRQEYKRGVPLYDVRI----VGDTDETGTIITFKPDPEIFTET 181
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+F+++T+ RIRELAFLN + I LR E + + Y + GG+ E+VQ+LN +++P
Sbjct: 182 TEFEYDTLQTRIRELAFLNKGIKIVLRDERTGAS----DTYKYDGGIIEFVQYLNRNREP 237
Query: 317 LHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
LH+ + G R D I +++ALQ+ +D+Y++ + +AN+I T +GGTH G K++LTR
Sbjct: 238 LHEQPIYIEGMR---DNIQVEIALQY-NDSYNENIYSFANNIHTHEGGTHESGFKSALTR 293
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N +++ +KD D +L+GE VREGLT IISV++P P+FEGQTKT+LGN E R +V+
Sbjct: 294 IINDYARRAGLLKDSDSNLTGEDVREGLTAIISVKIPEPQFEGQTKTKLGNSEARSIVES 353
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E L E+L+ +P V I+ K + A +A AA++AR+L R+K+ L S+LPGKLADCS
Sbjct: 354 MFAEKLQEFLDENPSVSRRIVEKGVQAARAREAARKARELTRRKNALEVSALPGKLADCS 413
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 414 SRDASISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 458
>gi|70725006|ref|YP_251920.1| DNA gyrase subunit B [Staphylococcus haemolyticus JCSC1435]
gi|68445730|dbj|BAE03314.1| DNA gyrase (topoisomerase II) subunit B [Staphylococcus
haemolyticus JCSC1435]
Length = 644
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 245/466 (52%), Positives = 323/466 (69%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVI 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE LEV V R+ YHQ Y +G P L V S D+ GT IRF D ++F
Sbjct: 129 SVVNALSEDLEVYVHRNDTIYHQAYKKGVPQFDLK----EVGSTDKTGTVIRFKADSEIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +++ T+ RIRELAFLN ++I LR E D E+ + + Y + GG++ YV+ LN +
Sbjct: 185 TETTVYNYETLQKRIRELAFLNKGISITLRDEREDVEQRE-DTYHYEGGIKSYVELLNEN 243
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+P+H+ + + D + I++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHEEPIYIHQTKDDVEIEIAMQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTR 302
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G +SK +KD LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR++VD+
Sbjct: 303 ILNSYGTQSKIIKDDKERLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQIVDR 362
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L HP+V ++ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 363 LFAEHFERFLYEHPNVARIVVEKGIMASRARVAAKKAREVTRRKSALEISSLPGKLADCS 422
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PEESEIF+VEGDSAGGS K+GRD + Q I+ PL+ I A
Sbjct: 423 SKKPEESEIFLVEGDSAGGSTKEGRDSKTQAIL-PLRGKILNVEKA 467
>gi|374605476|ref|ZP_09678403.1| DNA gyrase subunit B [Paenibacillus dendritiformis C454]
gi|374388927|gb|EHQ60322.1| DNA gyrase subunit B [Paenibacillus dendritiformis C454]
Length = 636
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/459 (51%), Positives = 319/459 (69%), Gaps = 13/459 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
TY QIQVLEGLEAVRKRP MYIGST RGLHHLV+E++DN++DEA AGY + I+V +
Sbjct: 7 TYDESQIQVLEGLEAVRKRPGMYIGSTSVRGLHHLVWEVVDNSIDEALAGYCTKIQVIVH 66
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+ + + A+E V+TVLHAGGKFGG GY VSGGLHGVG+SV
Sbjct: 67 EDNSITVIDNGRGIPVGIEQKMQRPAVEVVMTVLHAGGKFGGE--GYKVSGGLHGVGVSV 124
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALSESL VTV RDG + Q+Y RG P L + + GT IRF PD ++FT
Sbjct: 125 VNALSESLIVTVKRDGHIHQQEYRRGVPQYDLKV----LGDTEETGTTIRFKPDPEIFTD 180
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
+ +DH T+ RIRELAFLN + + L +D +Q + + GG+ E+V++LN +++
Sbjct: 181 TLVYDHETLVSRIRELAFLNKGIEMVL----TDERNDQTETFKYDGGIIEFVEYLNRNRE 236
Query: 316 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+H+ + D IT ++ALQ+ +D+Y++ + +AN+I T +GGTH G K++LTR +
Sbjct: 237 KMHEPPIYVEGQKDYITCEIALQY-NDSYTENIYSFANNIHTHEGGTHESGFKSALTRII 295
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +K +KD +LSG+ VREGLT I+SV++P P+FEGQTKT+LGN EVR +V+
Sbjct: 296 NEYARKMNLMKDNVSNLSGDDVREGLTAIVSVKIPEPQFEGQTKTKLGNSEVRSIVESLF 355
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E L E+++ +P + ++ K L A +A AA+RAR+L R+KS L SSLPGKLADCSS
Sbjct: 356 AERLMEFMDENPAISRKVVEKGLQAARARDAARRARELTRRKSALEVSSLPGKLADCSSK 415
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
+ E+FIVEGDSAGGSAKQGRDR FQ I+ PL+ I
Sbjct: 416 DASQCELFIVEGDSAGGSAKQGRDRHFQAIL-PLKGKIL 453
>gi|402837518|ref|ZP_10886039.1| DNA gyrase, B subunit [Eubacteriaceae bacterium OBRC8]
gi|402274977|gb|EJU24144.1| DNA gyrase, B subunit [Eubacteriaceae bacterium OBRC8]
Length = 640
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/470 (50%), Positives = 331/470 (70%), Gaps = 19/470 (4%)
Query: 70 ENPVSKT-YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
+N +++T YG+EQIQVLEGLE VRKRP MYIGSTG +GLHHLVYE++DNA+DEA AG+
Sbjct: 2 DNDINQTAYGAEQIQVLEGLEPVRKRPGMYIGSTGSKGLHHLVYEVVDNAIDEALAGFCD 61
Query: 129 NIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 188
I V++ +N ++V DNGRGIP+++HP T KS LETVLTVLHAGGKFG + GY VSGGL
Sbjct: 62 KIYVSIDVNNGITVIDNGRGIPVEVHPKTGKSTLETVLTVLHAGGKFG--AGGYKVSGGL 119
Query: 189 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTL----TCHVLPVDSKDRQGTRI 244
HGVG+SVVNALS+SL V ++G Y Q++ G VT + TC + + GT I
Sbjct: 120 HGVGVSVVNALSKSLTAVVKKEGKIYKQEFEYGNAVTDIKQIGTCPL------EETGTCI 173
Query: 245 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 304
F PD+++F + + T+ R+RELAFLN ++I L ED+ Y + GG+
Sbjct: 174 SFLPDEKIFDETV-YSFETLEHRLRELAFLNKGISITL--EDNRTSDKISKTYHYTGGII 230
Query: 305 EYVQWLNTDKKPLHDVVGFRKDVDGI-TIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
EYV+ +N K+PLH+ V + +DG I++A+Q+ +DAYS+ + +AN+I T++GG H+
Sbjct: 231 EYVKSMNKSKEPLHEDVIYFDKIDGTYDIEIAMQY-TDAYSENIYSFANNINTVEGGMHL 289
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
G K++LTR +N +K+ +K+KD + +GE +REGLT IISV++P+P++EGQTKT+LGN
Sbjct: 290 IGFKSALTRVINDYARKNNYLKEKDENFTGEDIREGLTAIISVKLPDPQYEGQTKTKLGN 349
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
P++R V+Q E + +LE +P I+ K + + +A AAKRARDL R+K +L S+S
Sbjct: 350 PQIRSSVEQVTVEEINIFLEENPACARIIMEKCMRSQRARQAAKRARDLTRRKGILESTS 409
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LPGKLADC P +SEIFIVEGDSAGGSAK+GR+ + Q I+ PL+ I
Sbjct: 410 LPGKLADCREKDPSKSEIFIVEGDSAGGSAKEGRNSQNQAIL-PLRGKIL 458
>gi|163783146|ref|ZP_02178140.1| gyrase B [Hydrogenivirga sp. 128-5-R1-1]
gi|159881480|gb|EDP74990.1| gyrase B [Hydrogenivirga sp. 128-5-R1-1]
Length = 798
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 237/464 (51%), Positives = 313/464 (67%), Gaps = 16/464 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG++ I+ + GLE VR RPAMYIG G RGLHHL++EILDNAVDEA AGYA N+ V +
Sbjct: 18 YGAQDIKAVTGLEHVRLRPAMYIGDVGERGLHHLIWEILDNAVDEAMAGYAKNVSVIIHD 77
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D S++V D+GRGIP+D+HP T K A+E V T+L AGGKF Y+ SGGLHGVG SVV
Sbjct: 78 DGSITVEDDGRGIPVDIHPETGKPAVEMVFTMLGAGGKF--EKKAYAYSGGLHGVGASVV 135
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TT 255
NALSE L V V+RDG Y Q+Y RG+PV L V + ++GTR+ F PD +F TT
Sbjct: 136 NALSEWLLVEVYRDGKIYRQEYRRGEPVYELKV----VGNTTKRGTRVTFKPDPDIFETT 191
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
I+FD + R+RELA+LNP++ L+ E SD E Y F G+EE V++L+ K+
Sbjct: 192 RIKFD--IVEKRLRELAYLNPEVRFYLKDERSDKEIV----YKFDRGIEELVEYLSQAKE 245
Query: 316 PL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
PL D+V + D DG+ +D+A ++ D Y + + + N+++T++GGTH+ G ++ LT+ +
Sbjct: 246 PLFKDIVRIQGDKDGVIVDIAFRYVRD-YKELIDSFVNNVKTVEGGTHVTGFRSGLTKAV 304
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
L + K K+ SGE VREGL +IS +VP P+FEGQTKT+LGN V+ +VD V
Sbjct: 305 VRLAEGLKLSKELKTMFSGEDVREGLVAVISCKVPEPQFEGQTKTKLGNQNVKTIVDSIV 364
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
+YLTEY + DVL I+ K++ A A AAK+A++LVR+KS L LPGKLADCS
Sbjct: 365 YDYLTEYFNENKDVLKLIVEKAIEAALAREAAKKAKELVRRKSPLEDGILPGKLADCSEK 424
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PE+ EIFIVEGDSAGGSAKQ RDRRFQ I+ PL+ I A
Sbjct: 425 DPEKCEIFIVEGDSAGGSAKQARDRRFQAIL-PLRGKIINVEKA 467
>gi|421858603|ref|ZP_16290868.1| type IIA topoisomerase [Paenibacillus popilliae ATCC 14706]
gi|410831899|dbj|GAC41305.1| type IIA topoisomerase [Paenibacillus popilliae ATCC 14706]
Length = 636
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/459 (52%), Positives = 318/459 (69%), Gaps = 13/459 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
TY QIQVLEGLEAVRKRP MYIGST RGLHHLV+E++DN++DEA AGY + I+V +
Sbjct: 7 TYDESQIQVLEGLEAVRKRPGMYIGSTSVRGLHHLVWEVVDNSIDEALAGYCTKIQVIVH 66
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+ + + A+E V+TVLHAGGKFGG GY VSGGLHGVG+SV
Sbjct: 67 EDNSITVIDNGRGIPVGIEQKMQRPAIEVVMTVLHAGGKFGGE--GYKVSGGLHGVGVSV 124
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALSESL VTV RDG Y Q+Y RG P L + D GT IRF PD + FT
Sbjct: 125 VNALSESLIVTVKRDGHIYQQEYRRGVPQYDLKV----LGDTDETGTTIRFKPDAETFTD 180
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
+ +D+ T+ RIRELAFLN + + L +D NQ + + GG+ E+V++LN +++
Sbjct: 181 TLVYDYETLISRIRELAFLNKGIEMVL----TDERTNQTEIFKYDGGIIEFVEYLNRNRE 236
Query: 316 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+H+ + D IT ++ALQ+ +D+Y++ + +AN+I T +GGTH G K++LTR +
Sbjct: 237 RMHEPPIYVEGQKDYITCEIALQY-NDSYTENIYSFANNIHTHEGGTHESGFKSALTRII 295
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +K +KD +LSG+ VREGLT I+SV++P P+FEGQTKT+LGN EVR +V+
Sbjct: 296 NEYSRKMNLMKDNVSNLSGDDVREGLTAIVSVKIPEPQFEGQTKTKLGNSEVRSIVESLF 355
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E L E+++ +P + ++ K L A +A AA+RAR+L R+KS L SSLPGKLADCSS
Sbjct: 356 AERLMEFMDENPAISRKVVEKGLQAARAREAARRARELTRRKSALEVSSLPGKLADCSSK 415
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
+ E+FIVEGDSAGGSAKQGRDR FQ I+ PL+ I
Sbjct: 416 DASQCELFIVEGDSAGGSAKQGRDRHFQAIL-PLKGKIL 453
>gi|365173766|ref|ZP_09361472.1| DNA gyrase, B subunit [Synergistes sp. 3_1_syn1]
gi|363616789|gb|EHL68216.1| DNA gyrase, B subunit [Synergistes sp. 3_1_syn1]
Length = 647
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/465 (49%), Positives = 323/465 (69%), Gaps = 17/465 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ I VLEGLEAVRKRP MYIG RGLHHLVYE++DN++DE+ AG+ I+V +
Sbjct: 20 YTAKDIHVLEGLEAVRKRPGMYIGDQSQRGLHHLVYEVVDNSIDESLAGFCDTIDVTINI 79
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV+V DNGRGIP ++H + KSA E VLTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 80 DGSVTVVDNGRGIPTEMH-ESGKSAAEVVLTVLHAGGKF--DKSAYQVSGGLHGVGVSVV 136
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS LE+T+WR+G EYHQ+Y RG P+T L V + +GTR++F PD+++F+T
Sbjct: 137 NALSVWLELTIWRNGKEYHQRYERGIPMTGLEA----VGDTELRGTRVQFMPDEEIFSTT 192
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+F + + R+RELAFLN +TI ED PEK + Y + GG+ +V++LN K+
Sbjct: 193 -EFQADILKQRLRELAFLNSHITINF--EDLRPEKPEKKSYNYPGGISSFVEYLNKGKEV 249
Query: 317 LHD---VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
L ++ KD +D+A+Q+ +D Y + + G+ N I TI+GGTH+ G ++++TR
Sbjct: 250 LFKGPMIISGEKD--QTQVDVAIQY-NDTYLERLYGFVNLINTIEGGTHVAGFRSAMTRA 306
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N +K K +K+KD +LSG+ ++EGLT +ISV+V P+FEGQTKT+LGN +V+ +VD
Sbjct: 307 INDEARKLKILKEKDNNLSGDDLKEGLTAVISVKVMEPQFEGQTKTKLGNNDVKGIVDSI 366
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
V E L L+ P++L I+ +L A +A AAK+A++LVR+KS++ +LPGKL+DCS+
Sbjct: 367 VYEGLKNALDERPEILKPIVESALRARQAREAAKKAKELVRRKSIMSGLTLPGKLSDCSN 426
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P + EI+IVEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 427 RNPADCEIYIVEGDSAGGSAKQGRNREFQAIL-PLRGKILNVEKA 470
>gi|410582430|ref|ZP_11319536.1| DNA gyrase subunit B [Thermaerobacter subterraneus DSM 13965]
gi|410505250|gb|EKP94759.1| DNA gyrase subunit B [Thermaerobacter subterraneus DSM 13965]
Length = 635
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 236/463 (50%), Positives = 320/463 (69%), Gaps = 12/463 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVR+RP MYIGSTGPRGLHHL++E++DNAVDEA AG + I V L A
Sbjct: 6 YDESQIQVLEGLEAVRRRPGMYIGSTGPRGLHHLIWEVVDNAVDEALAGRCTAITVTLHA 65
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D S SV DNG GIP+ +HP K +E VLT+LHAGGKF G + Y VSGGLHGVG+SVV
Sbjct: 66 DGSCSVRDNGGGIPVGIHPKVGKPTVEVVLTMLHAGGKFDGQA--YKVSGGLHGVGVSVV 123
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LEV V R+G + Q+Y RG+P T L V+ + D GT +RF PD ++F
Sbjct: 124 NALSEWLEVEVRREGRIHRQRYRRGQPETGL--EVVGTTAADDTGTYVRFKPDPEIFEET 181
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+F ++ + GR+RE+A LN L I LR E + + N + F GGL +V LN K+
Sbjct: 182 -EFKYDVVVGRLREIALLNSGLYIELRDERT----GERNLFQFMGGLRSFVALLNRTKEA 236
Query: 317 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LH + + ++ + DG+ +++ALQW + +Y +T+ +AN+I T +GGTH G K +LTR +N
Sbjct: 237 LHPEPISYKAERDGVEVEMALQWTT-SYVETLYSFANTIHTHEGGTHEAGFKMALTRVVN 295
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+K+ +K+ D +L+G+ +REGLT ++SV++P P+FEGQTKT+LGN EVR VVD
Sbjct: 296 DYARKANLLKNGDENLAGDDIREGLTAVLSVKLPEPQFEGQTKTKLGNSEVRGVVDSVTG 355
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L Y E +P V ++ K+++A++A AA++AR+L R+KS L ++LPGKL DC+
Sbjct: 356 EALATYFEENPQVARRVVEKAITAMRAREAARKARELTRRKSALEVTALPGKLTDCTVRD 415
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P +E+FIVEGDSAGGSAKQGRDRRFQ ++ PL+ I A
Sbjct: 416 PAMAELFIVEGDSAGGSAKQGRDRRFQAVL-PLRGKILNVEKA 457
>gi|384563957|ref|ZP_10011061.1| DNA gyrase, B subunit [Saccharomonospora glauca K62]
gi|384519811|gb|EIE97006.1| DNA gyrase, B subunit [Saccharomonospora glauca K62]
Length = 654
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/473 (48%), Positives = 320/473 (67%), Gaps = 21/473 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + I VLEGLEAVRKRP MYIGSTG RGLHHL+ E++DN+VDEA AG+A+ +EV LLA
Sbjct: 8 YSASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIQEVVDNSVDEAMAGFATRVEVTLLA 67
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D V V D+GRGIP+D+HP K +E VLT LHAGGKF S Y+VSGGLHGVG+SVV
Sbjct: 68 DGGVRVVDDGRGIPVDIHPVHGKPTVEIVLTQLHAGGKF--DSKSYAVSGGLHGVGVSVV 125
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS +L+V V RDG + Q Y R P +L DR GT + FW D ++F T
Sbjct: 126 NALSTALDVEVHRDGKIWVQHYERSVP-----GELLEKGPTDRTGTSVTFWADPEIFETT 180
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKE--------DSDPEKNQYNE--YFFAGGLEEY 306
++ T+A R++E+AFLN LTI LR E D+ E+ E Y++ GGLE++
Sbjct: 181 T-YNAETVARRLQEMAFLNKGLTIVLRDERVTEEEDADATGERAGIKERTYYYPGGLEDF 239
Query: 307 VQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 365
V+ +N K+ +H V+ F + DG+ +++A+QW ++ ++ ++ +AN+I T +GG H EG
Sbjct: 240 VKHINATKEAIHPSVISFDQKGDGLEVEVAMQW-NNGFTPSVYTFANTINTHEGGAHEEG 298
Query: 366 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 425
+A+LTR +N+ + K +K+KD +L+G+ VREGL I+SV++ P+FEGQTKT+LGN E
Sbjct: 299 FRAALTRVVNAYARDKKLLKEKDANLTGDDVREGLAAIVSVKLAEPQFEGQTKTKLGNSE 358
Query: 426 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 485
R V + E+L ++ E +P I++K++S+ +A LAA++ARDLVR+K + LP
Sbjct: 359 ARSFVQTTCNEWLADWFERNPAEAKIIINKAVSSAQARLAARKARDLVRRKGAMDIGGLP 418
Query: 486 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
GKL DC S PEE E++IVEGDSAGGSAK+GRD RFQ I+ P++ I A
Sbjct: 419 GKLKDCRSRNPEECELYIVEGDSAGGSAKEGRDSRFQAIL-PIRGKIINVEKA 470
>gi|21228521|ref|NP_634443.1| DNA gyrase subunit B [Methanosarcina mazei Go1]
gi|20907008|gb|AAM32115.1| DNA gyrase, subunit B [Methanosarcina mazei Go1]
Length = 634
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 245/460 (53%), Positives = 323/460 (70%), Gaps = 13/460 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y + IQVLEGLEAVRKRP+MYIGST RGLHHLVYE++DN++DEA AG+ S I+V +
Sbjct: 5 QVYDASHIQVLEGLEAVRKRPSMYIGSTDGRGLHHLVYEVVDNSIDEALAGFCSEIDVTI 64
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
+ SV+V DNGRGIPID HP KSALE V+T+LHAGGKF ++ Y VSGGLHGVG+S
Sbjct: 65 NPNGSVTVIDNGRGIPIDPHPVHKKSALEVVMTILHAGGKFDKNT--YKVSGGLHGVGVS 122
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALSE EV V RDG +Y Q+Y RGKP V + + D GT+ F PD ++F
Sbjct: 123 VVNALSEWTEVEVSRDGKKYFQRYIRGKP----ESDVREIGTSDTTGTKTTFKPDTKIFE 178
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
T F ++ + R+RELAFLN L I L K+ PE Q + ++GG+ E+V++LN K
Sbjct: 179 TT-DFQYDILLNRLRELAFLNRGLIINL-KDLRSPE-GQAETFNYSGGIIEFVEYLNKKK 235
Query: 315 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+PLH+ + F + D + +++A+Q+ ++ Y++ + +AN+I T +GGTHI G K +LTR
Sbjct: 236 QPLHEKPIYFERQRDDMVVEIAMQY-TNGYTENVYSFANNINTHEGGTHIIGFKTALTRV 294
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
N K +K K+ D L+G+ VREGLT IISV++ P+FEGQTKT+LGN EV+ +VD
Sbjct: 295 ANDYIKANKLSKE-DEKLTGDDVREGLTAIISVKLMEPQFEGQTKTKLGNSEVKGIVDSL 353
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
V + L EY E +P V + IL K+L A +A AAK+AR+L R+KS L S+LPGKLADCS+
Sbjct: 354 VTDGLAEYFEENPKVANIILDKALLAQRAREAAKKARELTRRKSALEVSTLPGKLADCSN 413
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P E EI+IVEGDSAGGSAKQGRDR FQ I+ PL+ I
Sbjct: 414 KNPAECEIYIVEGDSAGGSAKQGRDRSFQAIL-PLRGKIL 452
>gi|435851213|ref|YP_007312799.1| DNA gyrase, B subunit [Methanomethylovorans hollandica DSM 15978]
gi|433661843|gb|AGB49269.1| DNA gyrase, B subunit [Methanomethylovorans hollandica DSM 15978]
Length = 634
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/463 (50%), Positives = 322/463 (69%), Gaps = 13/463 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRP+MYIGST RGLHHLVYE++DN++DEA AG+ + I+V + +
Sbjct: 7 YDATHIQVLEGLEAVRKRPSMYIGSTDNRGLHHLVYEVVDNSIDEALAGFCNQIDVIINS 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D S++V DNGRGIP+D +P NKSALE V+T+LHAGGKF SS Y VSGGLHGVG+SVV
Sbjct: 67 DGSLTVQDNGRGIPVDTYPKYNKSALEVVMTILHAGGKFDKSS--YKVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE EV V RDG Y+Q+Y +G P+ V + GT + F PDK + T
Sbjct: 125 NALSEWTEVYVKRDGNLYYQRYEKGVPI----ADVQVFGKSEGTGTTVTFKPDKSILETT 180
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+ F +T+ R+REL+FLN L I + + E+ + +Y GG+ +V+ LN +
Sbjct: 181 V-FIFDTLVTRLRELSFLNKGLKITISDRRTSEEEKEVFQY--EGGIISFVEHLNQKRNV 237
Query: 317 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LH DV+ F ++ +G +++A+Q+ +D+Y++++ +AN+I T +GGTH+ G KA+LTR N
Sbjct: 238 LHKDVIYFEREKEGTIVEIAMQY-TDSYNESVYSFANNINTHEGGTHLVGFKAALTRVAN 296
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
KK+ K D LSGE +REGLT II+V++ P+FEGQTKT+LGN +V+ +V+ V
Sbjct: 297 DYIKKNNLAKGDD-KLSGEDIREGLTAIINVKLTEPQFEGQTKTKLGNSDVKGIVESMVS 355
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L E++E +P V ++IL K+L A +A AAK+AR+L R+K+ L S+LPGKLADCS
Sbjct: 356 EGLAEFMEENPKVANAILQKALDAQRAREAAKKARELTRRKNALDISTLPGKLADCSEKD 415
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P + E+++VEGDSAGGSAKQGRDRRFQ I+ P + I A
Sbjct: 416 PSQCELYLVEGDSAGGSAKQGRDRRFQAIL-PFRGKILNVEKA 457
>gi|357060838|ref|ZP_09121602.1| B subunit [Alloprevotella rava F0323]
gi|355375671|gb|EHG22954.1| B subunit [Alloprevotella rava F0323]
Length = 653
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 235/467 (50%), Positives = 317/467 (67%), Gaps = 13/467 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG TG RGLHHLVYE +DN++DEA AGY ++IEV +
Sbjct: 10 NYSASNIQVLEGLEAVRKRPAMYIGDTGERGLHHLVYETVDNSIDEALAGYCTHIEVTIC 69
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS+ V DNGRGIP+D+HP ++SALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 70 EDNSIVVQDNGRGIPVDMHPKEHRSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 127
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS ++ V+RDG Y Q+Y +GKP+ ++ V + +GTR +FWPD VF+T
Sbjct: 128 VNALSSHMKSQVFRDGKIYQQEYEKGKPLYSVKV----VGETELRGTRQQFWPDDTVFST 183
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKN-QYNEYFFAGGLEEYVQWLNTDK 314
+++ T++ R+RELA+LN L I L D E N + E+F GL ++V++L++ +
Sbjct: 184 TT-YNYETLSNRMRELAYLNAGLKITLTDLRQDDEGNIRQQEFFSEQGLPQFVRYLDSSR 242
Query: 315 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
L D V+ + +G+ ID+A+ + + Y++ + Y N+I TI+GGTH+ G + +LTR
Sbjct: 243 SHLFDDVIHISTNKNGLPIDVAVMYNT-GYAENIHSYVNNINTIEGGTHLTGFRQALTRV 301
Query: 374 LNSLGKKS--KTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
L + +++ K ++ I +SGE REGLT +ISV+V P+FEGQTKTRLGN EV V+
Sbjct: 302 LKNYAEQTAAKQIEKAKIEISGEDFREGLTAVISVKVAEPQFEGQTKTRLGNSEVTGAVN 361
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
Q+V E T YLE HP I+ K + A A +AA++AR+ V++KS L LPGKLADC
Sbjct: 362 QAVGEAFTNYLEEHPKEAKLIVDKVILAATARIAARKARESVQRKSPLTGGGLPGKLADC 421
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SS E E+F+VEGDSAGGSAKQGR RR Q I+ PL+ I A
Sbjct: 422 SSKDAAECELFLVEGDSAGGSAKQGRSRRTQAIL-PLRGKILNVEKA 467
>gi|384173667|ref|YP_005555052.1| DNA gyrase, B subunit [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|349592891|gb|AEP89078.1| DNA gyrase, B subunit [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
Length = 638
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 235/464 (50%), Positives = 316/464 (68%), Gaps = 11/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I + +
Sbjct: 7 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIQIE 66
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+ +H + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 67 KDNSITVVDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 124
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS L+VTV RDG + Q Y RG PVT L + D GT F PD ++FT
Sbjct: 125 VNALSTELDVTVHRDGKIHRQTYKRGVPVTDLEI----IGETDHTGTTTHFVPDPEIFTE 180
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
++D++ +A R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 181 TTEYDYDLLANRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 238
Query: 316 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+H+ + + DGIT+++ALQ+ +D+Y+ + + N+I T +GGTH G K LTR +
Sbjct: 239 VVHEEPIYIEGEKDGITVEVALQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 297
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +K +K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 298 NDYARKKGLIKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 357
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
+ ++ +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 358 STAMETFMLENPDAAKKIVDKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 417
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 418 DPSISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 460
>gi|281411537|ref|YP_003345616.1| DNA gyrase, B subunit [Thermotoga naphthophila RKU-10]
gi|281372640|gb|ADA66202.1| DNA gyrase, B subunit [Thermotoga naphthophila RKU-10]
Length = 636
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/465 (51%), Positives = 324/465 (69%), Gaps = 22/465 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +E I+VL+GLE VR RP MYIGSTG RGLHHLVYE++DN+VDEA AGY I V L
Sbjct: 4 YSAESIKVLKGLEPVRMRPGMYIGSTGKRGLHHLVYEVVDNSVDEALAGYCDWIRVTLHE 63
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV V DNGRGIP+D+HP +SALE V TVLHAGGKF S Y +SGGLHGVG+SVV
Sbjct: 64 DGSVEVEDNGRGIPVDIHPEEGRSALEVVFTVLHAGGKF--SKDSYKISGGLHGVGVSVV 121
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LEV V RDG Y Q+Y RGKPVT + + D+ GT +RF PD +F+
Sbjct: 122 NALSEWLEVRVHRDGKIYRQRYERGKPVTPVEV----IGETDKHGTIVRFKPDPLIFSET 177
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+FD + + R+RE+AFL P L I E D + + F GG+ EYV++LN KK
Sbjct: 178 -EFDPDVLEHRLREIAFLVPGLKI----EFEDRINGEKKTFKFDGGIVEYVKYLNRGKKV 232
Query: 317 LHDVVGFRKDV--------DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
HDV+ ++ D + +++A Q+ +D+YS+ ++ +AN+I+T+DGGTH+ K
Sbjct: 233 FHDVIYMKRTEKVQTKNGEDEVIVEIAFQY-TDSYSEDIVSFANTIKTVDGGTHVTAFKT 291
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTR +N GKK +K D S GE VREGLT ++SV V NPEFEGQTK++LGN EV++
Sbjct: 292 MLTRLMNEYGKKHGFLKGDD-SFQGEDVREGLTAVVSVYVKNPEFEGQTKSKLGNEEVKE 350
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+++ +++ L + + +P+++ +ILSK +S +A AA+RAR++VR+K+VL++++LPGKL
Sbjct: 351 AINRVMRDELKKIFDANPELVKTILSKIMSTKQAREAARRAREMVRRKNVLQNTTLPGKL 410
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCSST E++E+FIVEGDSAGGSAKQ RDR FQ ++ P++ I
Sbjct: 411 ADCSSTDREKTELFIVEGDSAGGSAKQARDREFQAVL-PIRGKIL 454
>gi|33469292|gb|AAQ19683.1| DNA gyrase subunit B [Staphylococcus haemolyticus]
Length = 644
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 245/466 (52%), Positives = 323/466 (69%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVI 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE LEV V R+ YHQ Y +G P L V S D+ GT IRF D ++F
Sbjct: 129 SVVNALSEDLEVYVHRNDTIYHQAYKKGVPQFDLK----EVGSTDKTGTVIRFKADGEIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +++ T+ RIRELAFLN ++I LR E D E+ + + Y + GG++ YV+ LN +
Sbjct: 185 TETTVYNYETLQKRIRELAFLNKGISITLRDEREDVEQRE-DTYHYEGGIKSYVELLNEN 243
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+P+H+ + + D + I++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHEEPIYIHQTKDDVEIEIAMQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTR 302
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G +SK +KD LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR++VD+
Sbjct: 303 ILNSYGTQSKIIKDDKERLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQIVDR 362
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L HP+V ++ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 363 LFAEHFERFLYEHPNVARIVVEKGIMASRARVAAKKAREVTRRKSALEISSLPGKLADCS 422
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PEESEIF+VEGDSAGGS K+GRD + Q I+ PL+ I A
Sbjct: 423 SKKPEESEIFLVEGDSAGGSTKEGRDSKTQAIL-PLRGKILNVEKA 467
>gi|317120855|ref|YP_004100858.1| DNA gyrase subunit B [Thermaerobacter marianensis DSM 12885]
gi|315590835|gb|ADU50131.1| DNA gyrase subunit B [Thermaerobacter marianensis DSM 12885]
Length = 635
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/463 (51%), Positives = 320/463 (69%), Gaps = 12/463 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVR+RP MYIGSTGPRGLHHL++E++DNAVDEA AG + I V L A
Sbjct: 6 YDESQIQVLEGLEAVRRRPGMYIGSTGPRGLHHLIWEVVDNAVDEALAGRCTAITVTLHA 65
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D S SV DNG GIP+ +HP K +E VLT+LHAGGKF G + Y VSGGLHGVG+SVV
Sbjct: 66 DGSCSVRDNGGGIPVGIHPKVGKPTVEVVLTMLHAGGKFDGQA--YKVSGGLHGVGVSVV 123
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LEV V R+G + Q+Y RGKP T L V D D GT +RF PD ++F
Sbjct: 124 NALSEWLEVEVRREGRIHRQRYRRGKPDTDLEV-VGTTDPAD-TGTYVRFKPDPEIFEET 181
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+F ++ + GR+RE+A LN L I L+ E + + N + F GGL +V LN K+P
Sbjct: 182 -EFKYDVVVGRLREIALLNSGLYIELKDERT----GERNLFQFMGGLRSFVALLNRTKEP 236
Query: 317 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LH + + ++ + DG+ +++ALQW + +Y +T+ +AN+I T +GGTH G K +LTR +N
Sbjct: 237 LHPEPISYKGERDGVEVEMALQWTT-SYVETLYSFANTIHTHEGGTHEAGFKMALTRVVN 295
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+K+ +K+ + +LSG+ +REGLT ++SV++P P+FEGQTKT+LGN EVR VVD
Sbjct: 296 DYARKANLIKNGEENLSGDDIREGLTAVLSVKLPEPQFEGQTKTKLGNSEVRGVVDSVTG 355
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L Y E +P V ++ K+++A++A AA++AR+L R+KS L ++LPGKL DC+
Sbjct: 356 EALATYFEENPQVARRVVEKAITAMRAREAARKARELTRRKSALEVTALPGKLTDCTVRD 415
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P +E+FIVEGDSAGGSAKQGRDRRFQ ++ PL+ I A
Sbjct: 416 PAMAELFIVEGDSAGGSAKQGRDRRFQAVL-PLRGKILNVEKA 457
>gi|292669300|ref|ZP_06602726.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Selenomonas noxia
ATCC 43541]
gi|292649141|gb|EFF67113.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Selenomonas noxia
ATCC 43541]
Length = 685
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 248/480 (51%), Positives = 325/480 (67%), Gaps = 15/480 (3%)
Query: 62 SIATEAFKE--NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAV 119
+I TE + V YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLVYE++DN++
Sbjct: 41 AIGTEEMGDEVTAVDADYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVYEVVDNSI 100
Query: 120 DEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSS 179
DEA AGY N+EV + DNS++V DNGRGIP+D+H + A+E VLTVLHAGGKFGG
Sbjct: 101 DEALAGYCDNVEVVIHKDNSITVTDNGRGIPVDMH-ESGMPAVEVVLTVLHAGGKFGGD- 158
Query: 180 SGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDR 239
GY VSGGLHGVG+SVVNALS S+EV V RDG Y ++RG VT H + + +
Sbjct: 159 -GYKVSGGLHGVGVSVVNALSSSMEVEVRRDGKIYEISFTRG--VTVNKLHEIGI--SET 213
Query: 240 QGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFF 299
GTR+ F PD ++FT + T+ R+RELAFLN +TI L D E+ + + F
Sbjct: 214 TGTRVHFVPDPEIFTVT-TYSFETLKHRLRELAFLNHGITITLV--DERGEEERRETFHF 270
Query: 300 AGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTID 358
GG+ +V LN K+ +++ + F D +++A+Q+ +D+Y + + + N+I T +
Sbjct: 271 EGGIRSFVSHLNRKKETINEEPIYFNGVKDDTVVEIAMQY-NDSYQENIYSFVNNINTEE 329
Query: 359 GGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTK 418
GGTH+ G K +LTR N ++ +KDKD +LSGE VREGLTC+IS++V P+FEGQTK
Sbjct: 330 GGTHLAGFKIALTRAANDFARRLSVLKDKDGNLSGEDVREGLTCVISLKVREPQFEGQTK 389
Query: 419 TRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSV 478
T+LGN EVR +VD V E LTEY E +P + +L K L A +A AA++AR+L R+K+
Sbjct: 390 TKLGNSEVRGIVDSIVTEGLTEYFEENPAITKKVLEKGLMASRAREAARKARELTRRKNA 449
Query: 479 LRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
L SSLPGKLADCS P++ EI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 450 LEVSSLPGKLADCSVKDPDQCEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNVEKA 508
>gi|357058348|ref|ZP_09119202.1| B subunit [Selenomonas infelix ATCC 43532]
gi|355374201|gb|EHG21502.1| B subunit [Selenomonas infelix ATCC 43532]
Length = 684
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 242/467 (51%), Positives = 321/467 (68%), Gaps = 13/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLVYE++DN++DEA AGY N+EV
Sbjct: 53 VDADYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVYEVVDNSIDEALAGYCDNVEV 112
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V DNGRGIP+D+H + A+E VLTVLHAGGKFGG GY VSGGLHGVG
Sbjct: 113 VIHRDNSITVTDNGRGIPVDMHE-SGMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVG 169
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS ++V V RDG + ++RG VT H + + + GTR+ F PD ++
Sbjct: 170 VSVVNALSSEMDVQVRRDGKIHAISFTRG--VTQEKLH--EIGASETTGTRVHFVPDPEI 225
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FT + T+ R+RELAFLN +TI L E + E+ + + F GG+ +V LN
Sbjct: 226 FTVTT-YSFETLKHRLRELAFLNHGITITLVDERGEAERRE--TFHFDGGIRSFVSHLNR 282
Query: 313 DKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
K+ +++ + F D +++A+Q+ +D+Y + + + N+I T +GGTH+ G K +LT
Sbjct: 283 KKETINEEPIYFNGVKDDTVVEIAMQY-NDSYQENIYSFVNNINTEEGGTHLAGFKIALT 341
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R N ++ +KDKD +LSGE VREGLTC+IS++V P+FEGQTKT+LGN EVR +VD
Sbjct: 342 RAANDFARRLNVLKDKDGNLSGEDVREGLTCVISLKVREPQFEGQTKTKLGNSEVRGIVD 401
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E LTEY E +P + +L K+L A +A AA++AR+L R+K+ L SSLPGKLADC
Sbjct: 402 SIVTEGLTEYFEENPAITKKVLDKALMASRAREAARKARELTRRKNALEVSSLPGKLADC 461
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P++ EI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 462 SVKDPDQCEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNVEKA 507
>gi|375006808|ref|YP_004980435.1| DNA gyrase subunit B [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359285651|gb|AEV17335.1| DNA gyrase subunit B [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 640
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 252/473 (53%), Positives = 328/473 (69%), Gaps = 18/473 (3%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E V +TY + QIQVLEGLEAVRKRP MYIGSTGP+GLHHLV+EI+DN++DEA AGY +N
Sbjct: 4 EQRVEQTYDASQIQVLEGLEAVRKRPGMYIGSTGPKGLHHLVWEIVDNSIDEALAGYCTN 63
Query: 130 IEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 189
I+V + DNS++VADNGRGIP+D+H AT + A+E ++TVLHAGGKFGG VSGGLH
Sbjct: 64 IDVTIGKDNSITVADNGRGIPVDIHEATGRPAVEVIMTVLHAGGKFGGGGY--KVSGGLH 121
Query: 190 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 249
GVG SVVNALSE LEV V+RDG ++Q+Y RG+P T L + DR GT RF PD
Sbjct: 122 GVGASVVNALSEWLEVYVYRDGKIHYQRYERGEPCTDLQV----IGETDRTGTTTRFKPD 177
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 309
++FT +FD+ T+A R+RELAFLN L I L E D KN EY + GG+ YV+
Sbjct: 178 PEIFTETTEFDYETLATRLRELAFLNRGLKITLTDERVDSRKN---EYVYEGGIRSYVRH 234
Query: 310 LNTDKKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 365
LN ++ LH+ + G R DGI +++ALQ+ +D Y+ + + N+I T +GGTH G
Sbjct: 235 LNRTREVLHEEPIYIAGER---DGIAVEIALQY-NDGYTSNIYSFVNNIHTHEGGTHESG 290
Query: 366 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 425
K +LTR +N +K + K+ D +L+GE VREGLT I+S++ P+P+FEGQTKT+LGN +
Sbjct: 291 FKMALTRIINDYARKQQIFKENDTNLTGEDVREGLTAIVSIKHPSPQFEGQTKTKLGNSD 350
Query: 426 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 485
R V D E +L +P + I+ K + A +A LAAK+AR+L R+KS L S+LP
Sbjct: 351 ARTVTDAVFSEQFETFLLENPTIARKIVEKGMMAARARLAAKKARELTRRKSALEISNLP 410
Query: 486 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
GKLADCSS P SE+++VEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 411 GKLADCSSRDPSISELYVVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 462
>gi|289551838|ref|YP_003472742.1| DNA gyrase subunit B [Staphylococcus lugdunensis HKU09-01]
gi|289181369|gb|ADC88614.1| DNA gyrase subunit B [Staphylococcus lugdunensis HKU09-01]
Length = 640
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 246/461 (53%), Positives = 321/461 (69%), Gaps = 10/461 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA IEV
Sbjct: 7 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYADQIEVI 66
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 67 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 124
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE LEV V R+ YHQ Y +G P L V D+ GT IRF D ++F
Sbjct: 125 SVVNALSEDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGETDKTGTVIRFKADSEIF 180
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +D++T+ RIRELAFLN ++I L+ E D E+ + + Y + GG++ YV+ +N +
Sbjct: 181 TETTVYDYDTLQKRIRELAFLNKGISITLKDERDDEEQRE-DTYHYEGGIKSYVELMNEN 239
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+P+H+ + + D I I++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 240 KEPIHEEPIYIHQMKDDIEIEIAIQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTR 298
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G KSK +K+ LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 299 VLNSYGTKSKIIKEDKDRLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDK 358
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
EY +L +P+V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 359 LFSEYFERFLYENPNVARIIVEKGIMASRARVAAKKAREVTRRKSHLEISSLPGKLADCS 418
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
S P+ESEIFIVEGDSAGGS K+GRD R Q I+ PL+ I
Sbjct: 419 SKNPDESEIFIVEGDSAGGSTKEGRDSRTQAIL-PLRGKIL 458
>gi|393809339|gb|AFN25843.1| DNA gyrase subunit B [Staphylococcus hominis]
Length = 644
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 245/466 (52%), Positives = 323/466 (69%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 71 IENDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V R+ YHQ Y +G P L V S D+ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGSTDKTGTVIRFKADSEIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
+ +++ T+ RIRELAFLN ++I LR E D E+ + + Y + GG++ YV+ LN +
Sbjct: 185 SETTVYNYETLQKRIRELAFLNKGISITLRDEREDKEQRE-DTYHYEGGIKSYVELLNEN 243
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTR 302
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G +SK +KD LSGE REGLT ++SV+ NP+FEGQTKT+LGN EVR++VD+
Sbjct: 303 VLNSYGTQSKIIKDDKERLSGEDTREGLTAVVSVKHGNPQFEGQTKTKLGNSEVRQIVDR 362
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P+V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPNVARIIVEKGIMASRARVAAKKAREVTRRKSALEISSLPGKLADCS 422
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P+ESEIF+VEGDSAGGS K+GRD + Q I+ PL+ I A
Sbjct: 423 SKNPDESEIFLVEGDSAGGSTKEGRDSKTQAIL-PLRGKILNVEKA 467
>gi|228474176|ref|ZP_04058913.1| DNA gyrase, B subunit [Staphylococcus hominis SK119]
gi|228271871|gb|EEK13208.1| DNA gyrase, B subunit [Staphylococcus hominis SK119]
Length = 640
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 245/466 (52%), Positives = 323/466 (69%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 7 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 66
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 67 IENDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 124
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V R+ YHQ Y +G P L V S D+ GT IRF D ++F
Sbjct: 125 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGSTDKTGTVIRFKADSEIF 180
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
+ +++ T+ RIRELAFLN ++I LR E D E+ + + Y + GG++ YV+ LN +
Sbjct: 181 SETTVYNYETLQKRIRELAFLNKGISITLRDEREDKEQRE-DTYHYEGGIKSYVELLNEN 239
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 240 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTR 298
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G +SK +KD LSGE REGLT ++SV+ NP+FEGQTKT+LGN EVR++VD+
Sbjct: 299 VLNSYGTQSKIIKDDKERLSGEDTREGLTAVVSVKHGNPQFEGQTKTKLGNSEVRQIVDR 358
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P+V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 359 LFSEHFERFLYENPNVARIIVEKGIMASRARVAAKKAREVTRRKSALEISSLPGKLADCS 418
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P+ESEIF+VEGDSAGGS K+GRD + Q I+ PL+ I A
Sbjct: 419 SKNPDESEIFLVEGDSAGGSTKEGRDSKTQAIL-PLRGKILNVEKA 463
>gi|261417505|ref|YP_003251187.1| DNA gyrase subunit B [Geobacillus sp. Y412MC61]
gi|261373962|gb|ACX76705.1| DNA gyrase, B subunit [Geobacillus sp. Y412MC61]
Length = 640
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 252/473 (53%), Positives = 328/473 (69%), Gaps = 18/473 (3%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E V +TY + QIQVLEGLEAVRKRP MYIGSTGP+GLHHLV+EI+DN++DEA AGY +N
Sbjct: 4 EQRVEQTYDASQIQVLEGLEAVRKRPGMYIGSTGPKGLHHLVWEIVDNSIDEALAGYCTN 63
Query: 130 IEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 189
I+V + DNS++VADNGRGIP+D+H AT + A+E ++TVLHAGGKFGG VSGGLH
Sbjct: 64 IDVTIGKDNSITVADNGRGIPVDIHEATGRPAVEVIMTVLHAGGKFGGGGY--KVSGGLH 121
Query: 190 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 249
GVG SVVNALSE LEV V+RDG ++Q+Y RG+P T L + DR GT RF PD
Sbjct: 122 GVGASVVNALSEWLEVYVYRDGKIHYQRYERGEPCTDLQV----IGETDRTGTTTRFKPD 177
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 309
++FT +FD+ T+A R+RELAFLN L I L E D KN EY + GG+ YV+
Sbjct: 178 PEIFTETTEFDYETLATRLRELAFLNRGLKITLTDERVDSRKN---EYVYEGGIRSYVRH 234
Query: 310 LNTDKKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 365
LN ++ LH+ + G R DGI +++ALQ+ +D Y+ + + N+I T +GGTH G
Sbjct: 235 LNRTREVLHEEPIYIAGER---DGIAVEIALQY-NDGYTSNIYSFVNNIHTHEGGTHESG 290
Query: 366 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 425
K +LTR +N +K + K+ D +L+GE VREGLT I+S++ P+P+FEGQTKT+LGN +
Sbjct: 291 FKMALTRIINDYARKQQIFKENDANLTGEDVREGLTAIVSIKHPSPQFEGQTKTKLGNSD 350
Query: 426 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 485
R V D E +L +P + I+ K + A +A LAAK+AR+L R+KS L S+LP
Sbjct: 351 ARTVTDAVFSEQFETFLLENPTIARKIVEKGMMAARARLAAKKARELTRRKSALEISNLP 410
Query: 486 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
GKLADCSS P SE+++VEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 411 GKLADCSSRDPSISELYVVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 462
>gi|56418540|ref|YP_145858.1| DNA gyrase subunit B [Geobacillus kaustophilus HTA426]
gi|448236315|ref|YP_007400373.1| DNA gyrase subunit beta [Geobacillus sp. GHH01]
gi|56378382|dbj|BAD74290.1| DNA gyrase subunit B [Geobacillus kaustophilus HTA426]
gi|445205157|gb|AGE20622.1| DNA gyrase subunit beta [Geobacillus sp. GHH01]
Length = 638
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 252/473 (53%), Positives = 328/473 (69%), Gaps = 18/473 (3%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E V +TY + QIQVLEGLEAVRKRP MYIGSTGP+GLHHLV+EI+DN++DEA AGY +N
Sbjct: 2 EQRVEQTYDASQIQVLEGLEAVRKRPGMYIGSTGPKGLHHLVWEIVDNSIDEALAGYCTN 61
Query: 130 IEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 189
I+V + DNS++VADNGRGIP+D+H AT + A+E ++TVLHAGGKFGG VSGGLH
Sbjct: 62 IDVTIGKDNSITVADNGRGIPVDIHEATGRPAVEVIMTVLHAGGKFGGGGY--KVSGGLH 119
Query: 190 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 249
GVG SVVNALSE LEV V+RDG ++Q+Y RG+P T L + DR GT RF PD
Sbjct: 120 GVGASVVNALSEWLEVYVYRDGKIHYQRYERGEPCTDLQV----IGETDRTGTTTRFKPD 175
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 309
++FT +FD+ T+A R+RELAFLN L I L E D KN EY + GG+ YV+
Sbjct: 176 PEIFTETTEFDYETLATRLRELAFLNRGLKITLTDERVDSRKN---EYVYEGGIRSYVRH 232
Query: 310 LNTDKKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 365
LN ++ LH+ + G R DGI +++ALQ+ +D Y+ + + N+I T +GGTH G
Sbjct: 233 LNRTREVLHEEPIYIAGER---DGIAVEIALQY-NDGYTSNIYSFVNNIHTHEGGTHESG 288
Query: 366 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 425
K +LTR +N +K + K+ D +L+GE VREGLT I+S++ P+P+FEGQTKT+LGN +
Sbjct: 289 FKMALTRIINDYARKQQIFKENDTNLTGEDVREGLTAIVSIKHPSPQFEGQTKTKLGNSD 348
Query: 426 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 485
R V D E +L +P + I+ K + A +A LAAK+AR+L R+KS L S+LP
Sbjct: 349 ARTVTDAVFSEQFETFLLENPTIARKIVEKGMMAARARLAAKKARELTRRKSALEISNLP 408
Query: 486 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
GKLADCSS P SE+++VEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 409 GKLADCSSRDPSISELYVVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 460
>gi|448603022|ref|ZP_21656843.1| DNA gyrase subunit B [Haloferax sulfurifontis ATCC BAA-897]
gi|445746218|gb|ELZ97680.1| DNA gyrase subunit B [Haloferax sulfurifontis ATCC BAA-897]
Length = 639
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 240/459 (52%), Positives = 317/459 (69%), Gaps = 11/459 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ IEVAL
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDAIEVALHE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSV DNGRGIP+D H ++ ALE ++TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVTDNGRGIPVDTHEQYDRPALEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS LEV V RDG + ++ G+P V ++ + GT IRFWPD +F T
Sbjct: 125 NALSSELEVEVKRDGAVWTHRFEFGEPQVDQFERVRDLEPGEDTGTTIRFWPDDGIFETT 184
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+FD T+ R+RELAFLN + I+L E +D + + + F GG+ E+V++LN K
Sbjct: 185 -EFDFKTLENRLRELAFLNSGVEISLTDERTD----ESSSFRFEGGIREFVEYLNETKTA 239
Query: 317 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LHD ++ + + +GI +++A+Q +D ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 240 LHDDIIYYDDESEGIEVEIAMQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVN 298
Query: 376 SLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
+ D D +L GE VREGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 299 DYANTHDMLDDLDGDNLRGEDVREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESVT 358
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
+ L + E +PD +I+SK++ A +A AAK+A +L R+KS L S+SLPGKLADC S
Sbjct: 359 HQQLGTFFEENPDTATAIISKAVEAARARKAAKQAEELTRRKSALESTSLPGKLADCQSR 418
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P +SE+FIVEGDSAGGSAKQGRDR+FQ I+ PL+ I
Sbjct: 419 DPSKSELFIVEGDSAGGSAKQGRDRKFQAIL-PLKGKIL 456
>gi|406980547|gb|EKE02131.1| hypothetical protein ACD_20C00421G0005 [uncultured bacterium]
Length = 814
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 237/465 (50%), Positives = 325/465 (69%), Gaps = 12/465 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S+TY + I+VLEGLEAVR RP MYIGST RGLHHL+YE++DN+VDEA AGY + I V
Sbjct: 6 SQTYDASNIRVLEGLEAVRLRPGMYIGSTSQRGLHHLIYEVVDNSVDEALAGYCTEIRVT 65
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ D SV+V DNGRGIP+D+ P + KSALE V TVLHAGGKFG GY VSGGLHGVG
Sbjct: 66 VHIDESVTVEDNGRGIPVDIKPDSGKSALEIVHTVLHAGGKFG--DGGYKVSGGLHGVGA 123
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE + V V+R G + Q Y RG+P T V V D++GT+ RFWPD ++F
Sbjct: 124 SVVNALSEKMIVEVFRQGWVHKQTYLRGEPNTP----VEKVRETDKKGTKTRFWPDPEIF 179
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
Q D +TI+ R+RE+AFLN L I E+++ E+ + F GG+ YV++LN +
Sbjct: 180 KETTQIDRDTISSRLREMAFLNKGLRIVFIDEETEAEE----VFHFEGGIASYVEYLNKN 235
Query: 314 KKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+ +H + K + +++A+Q+ +DAYS+T+L +AN+I T GGTH+ G++ +LTR+
Sbjct: 236 RVTIHPEIYMEKTEANVCVEVAIQY-TDAYSETILSFANNIHTHHGGTHLTGLRNALTRS 294
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N +K+ +K+ + +LSG+ VREGLT I+SV+VP+P+FEGQTK +LGN EV+ +V
Sbjct: 295 INDYARKNNIIKENEDNLSGDDVREGLTAIVSVKVPDPQFEGQTKEKLGNSEVQSIVQSV 354
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
V E E+ E +P +I+ K++ A +A AA++AR+L R+KSVL +S+LPGKLADCS
Sbjct: 355 VVEKFQEWFEFNPKNGRAIIEKAVQASRAREAARKARELTRRKSVLENSTLPGKLADCSC 414
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
++ EI+IVEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 415 READKCEIYIVEGDSAGGSAKQGRNRMFQAIL-PLRGKILNVERA 458
>gi|297528381|ref|YP_003669656.1| DNA gyrase subunit beta [Geobacillus sp. C56-T3]
gi|319765163|ref|YP_004130664.1| DNA gyrase B subunit [Geobacillus sp. Y412MC52]
gi|297251633|gb|ADI25079.1| DNA gyrase, B subunit [Geobacillus sp. C56-T3]
gi|317110029|gb|ADU92521.1| DNA gyrase, B subunit [Geobacillus sp. Y412MC52]
Length = 638
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 252/473 (53%), Positives = 328/473 (69%), Gaps = 18/473 (3%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E V +TY + QIQVLEGLEAVRKRP MYIGSTGP+GLHHLV+EI+DN++DEA AGY +N
Sbjct: 2 EQRVEQTYDASQIQVLEGLEAVRKRPGMYIGSTGPKGLHHLVWEIVDNSIDEALAGYCTN 61
Query: 130 IEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 189
I+V + DNS++VADNGRGIP+D+H AT + A+E ++TVLHAGGKFGG VSGGLH
Sbjct: 62 IDVTIGKDNSITVADNGRGIPVDIHEATGRPAVEVIMTVLHAGGKFGGGGY--KVSGGLH 119
Query: 190 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 249
GVG SVVNALSE LEV V+RDG ++Q+Y RG+P T L + DR GT RF PD
Sbjct: 120 GVGASVVNALSEWLEVYVYRDGKIHYQRYERGEPCTDLQV----IGETDRTGTTTRFKPD 175
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 309
++FT +FD+ T+A R+RELAFLN L I L E D KN EY + GG+ YV+
Sbjct: 176 PEIFTETTEFDYETLATRLRELAFLNRGLKITLTDERVDSRKN---EYVYEGGIRSYVRH 232
Query: 310 LNTDKKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 365
LN ++ LH+ + G R DGI +++ALQ+ +D Y+ + + N+I T +GGTH G
Sbjct: 233 LNRTREVLHEEPIYIAGER---DGIAVEIALQY-NDGYTSNIYSFVNNIHTHEGGTHESG 288
Query: 366 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 425
K +LTR +N +K + K+ D +L+GE VREGLT I+S++ P+P+FEGQTKT+LGN +
Sbjct: 289 FKMALTRIINDYARKQQIFKENDANLTGEDVREGLTAIVSIKHPSPQFEGQTKTKLGNSD 348
Query: 426 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 485
R V D E +L +P + I+ K + A +A LAAK+AR+L R+KS L S+LP
Sbjct: 349 ARTVTDAVFSEQFETFLLENPTIARKIVEKGMMAARARLAAKKARELTRRKSALEISNLP 408
Query: 486 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
GKLADCSS P SE+++VEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 409 GKLADCSSRDPSISELYVVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 460
>gi|407962968|dbj|BAM56207.1| DNA gyrase subunit B [Bacillus subtilis BEST7003]
Length = 640
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/464 (50%), Positives = 316/464 (68%), Gaps = 11/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I + +
Sbjct: 9 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIQIE 68
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+ +H + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 69 KDNSITVVDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 126
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS L+VTV RDG + Q Y RG PVT L + D GT F PD ++F+
Sbjct: 127 VNALSTELDVTVHRDGKIHRQTYKRGVPVTDLEI----IGETDHTGTTTHFVPDPEIFSE 182
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
++D++ +A R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 183 TTEYDYDLLANRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 240
Query: 316 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+H+ + + DGIT+++ALQ+ +D+Y+ + + N+I T +GGTH G K LTR +
Sbjct: 241 VVHEEPIYIEGEKDGITVEVALQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 299
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +K +K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 300 NDYARKKGLIKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 359
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
+ ++ +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 360 STAMETFMLENPDAAKKIVDKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 419
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 420 DPSISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 462
>gi|376259386|ref|YP_005146106.1| DNA gyrase subunit B [Clostridium sp. BNL1100]
gi|373943380|gb|AEY64301.1| DNA gyrase, B subunit [Clostridium sp. BNL1100]
Length = 642
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 245/458 (53%), Positives = 318/458 (69%), Gaps = 16/458 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ +Y QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+ N+VDEA AG I+V
Sbjct: 7 ASSYDESQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVANSVDEALAGRCDTIQVI 66
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++V DNG GIP+ +HP LE V T+LHAGGKFG S YSVSGGLHGVG
Sbjct: 67 VHKDNSITVTDNGSGIPVGIHPKMGIPTLEVVHTILHAGGKFG--SGAYSVSGGLHGVGA 124
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSES+EV V R+G Y QKYSRGKPVT++ V + GT F PD ++F
Sbjct: 125 SVVNALSESMEVEVKREGHIYKQKYSRGKPVTSVEI----VGETEESGTITTFKPDPEIF 180
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDP--EKNQYNEYFFAGGLEEYVQWLN 311
I FD + + R RE+AFLN + I L E D EKN + + GG+ +V++LN
Sbjct: 181 ED-IVFDFDAMITRYREMAFLNRGIKIKLIDERPDEIIEKNLH----YEGGIISFVEYLN 235
Query: 312 TDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 370
K+PLHD V+ F D +++A+Q+ +D Y++T+ YAN+I T +GGTH+ G + ++
Sbjct: 236 KTKEPLHDKVIYFEGTRDANIVEVAMQY-NDNYNETVFSYANNIATTEGGTHLTGFRTAI 294
Query: 371 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
T+ LN +K +K+ D +LSGE VREGLT +ISV++P P+FEGQTKT+LGN E+R +V
Sbjct: 295 TKVLNDYARKFNIIKENDKNLSGEDVREGLTAVISVKLPEPQFEGQTKTKLGNSEIRTLV 354
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
+ V + L +LE +P + IL KSL+A +A AA++AR+L R+KS + SS+LPGKLAD
Sbjct: 355 ENVVSDKLNIFLEENPSIAKIILDKSLTAARAREAARKARELTRRKSAMDSSTLPGKLAD 414
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPL 528
CS P ++EIFIVEGDSAGGSAKQGRDRR Q I+ PL
Sbjct: 415 CSEKDPTKTEIFIVEGDSAGGSAKQGRDRRIQAIL-PL 451
>gi|16077074|ref|NP_387887.1| DNA gyrase subunit B [Bacillus subtilis subsp. subtilis str. 168]
gi|221307815|ref|ZP_03589662.1| DNA gyrase subunit B [Bacillus subtilis subsp. subtilis str. 168]
gi|221312137|ref|ZP_03593942.1| DNA gyrase subunit B [Bacillus subtilis subsp. subtilis str. NCIB
3610]
gi|221317070|ref|ZP_03598364.1| DNA gyrase subunit B [Bacillus subtilis subsp. subtilis str. JH642]
gi|221321333|ref|ZP_03602627.1| DNA gyrase subunit B [Bacillus subtilis subsp. subtilis str. SMY]
gi|321313673|ref|YP_004205960.1| DNA gyrase subunit B [Bacillus subtilis BSn5]
gi|402774249|ref|YP_006628193.1| DNA gyrase subunit B [Bacillus subtilis QB928]
gi|418030644|ref|ZP_12669129.1| DNA gyrase subunit B [Bacillus subtilis subsp. subtilis str. SC-8]
gi|428277418|ref|YP_005559153.1| DNA gyrase subunit B [Bacillus subtilis subsp. natto BEST195]
gi|449092720|ref|YP_007425211.1| DNA gyrase subunit B [Bacillus subtilis XF-1]
gi|452912985|ref|ZP_21961613.1| DNA gyrase, B subunit [Bacillus subtilis MB73/2]
gi|121887|sp|P05652.1|GYRB_BACSU RecName: Full=DNA gyrase subunit B
gi|40018|emb|CAA26221.1| unnamed protein product [Bacillus subtilis]
gi|467396|dbj|BAA05242.1| B subunit of DNA gyrase [Bacillus subtilis]
gi|2632273|emb|CAB11782.1| DNA gyrase (subunit B) [Bacillus subtilis subsp. subtilis str. 168]
gi|291482375|dbj|BAI83450.1| DNA gyrase subunit B [Bacillus subtilis subsp. natto BEST195]
gi|320019947|gb|ADV94933.1| DNA gyrase subunit B [Bacillus subtilis BSn5]
gi|351471703|gb|EHA31816.1| DNA gyrase subunit B [Bacillus subtilis subsp. subtilis str. SC-8]
gi|402479435|gb|AFQ55944.1| DNA gyrase (subunit B) [Bacillus subtilis QB928]
gi|407955697|dbj|BAM48937.1| DNA gyrase subunit B [Bacillus subtilis BEST7613]
gi|449026635|gb|AGE61874.1| DNA gyrase subunit B [Bacillus subtilis XF-1]
gi|452118013|gb|EME08407.1| DNA gyrase, B subunit [Bacillus subtilis MB73/2]
Length = 638
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/464 (50%), Positives = 316/464 (68%), Gaps = 11/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I + +
Sbjct: 7 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIQIE 66
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+ +H + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 67 KDNSITVVDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 124
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS L+VTV RDG + Q Y RG PVT L + D GT F PD ++F+
Sbjct: 125 VNALSTELDVTVHRDGKIHRQTYKRGVPVTDLEI----IGETDHTGTTTHFVPDPEIFSE 180
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
++D++ +A R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 181 TTEYDYDLLANRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 238
Query: 316 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+H+ + + DGIT+++ALQ+ +D+Y+ + + N+I T +GGTH G K LTR +
Sbjct: 239 VVHEEPIYIEGEKDGITVEVALQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 297
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +K +K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 298 NDYARKKGLIKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 357
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
+ ++ +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 358 STAMETFMLENPDAAKKIVDKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 417
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 418 DPSISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 460
>gi|402309693|ref|ZP_10828676.1| DNA gyrase, B subunit [Eubacterium sp. AS15]
gi|400371189|gb|EJP24154.1| DNA gyrase, B subunit [Eubacterium sp. AS15]
Length = 640
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 237/471 (50%), Positives = 331/471 (70%), Gaps = 11/471 (2%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E V+ YG+EQIQVLEGLE VRKRP MYIGSTG +GLHHLVYE++DNA+DEA AGY N
Sbjct: 2 EEKVNIEYGAEQIQVLEGLEPVRKRPGMYIGSTGSKGLHHLVYEVVDNAIDEALAGYCKN 61
Query: 130 IEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 189
I V++ +N ++V D+GRGIP+++HP T KS LETVLTVLHAGGKFG + GY VSGGLH
Sbjct: 62 IYVSIDVNNGITVIDDGRGIPVEIHPKTGKSTLETVLTVLHAGGKFG--AGGYKVSGGLH 119
Query: 190 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 249
GVG+SVVNALS+SL V +DG Y Q++ +G PV+ + HV+ + +GT I F PD
Sbjct: 120 GVGVSVVNALSKSLTAVVKKDGKIYKQEFEKGNPVSDV--HVVGDCPMEERGTCISFLPD 177
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 309
+ VF + + + R+RELAFLN ++I L ED+ + +Y + GG+ EYV+
Sbjct: 178 ETVFEETV-YSFEVLEHRLRELAFLNKGISITL--EDNRTIEKVSRKYHYEGGIIEYVKA 234
Query: 310 LNTDKKPLHDVVGFRKDVDGIT--IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
LN +++ L +V+ F K + + I++A+Q+ +DAY + + +AN+I T++GG H+ G K
Sbjct: 235 LNKNREALTEVIYFNKLDEEFSYDIEIAMQY-TDAYVENIYSFANNINTVEGGMHLIGFK 293
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
++LTR +N +K+ +K+KD + +GE +REGLT IISV++P P++EGQTKT+LGNP++R
Sbjct: 294 SALTRVVNDYARKNNMLKEKDENFTGEDIREGLTAIISVKLPEPQYEGQTKTKLGNPQMR 353
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
V+Q + + +LE +P I+ K + + +A AAKRARDL R+K +L S+SLPGK
Sbjct: 354 SSVEQITVDQVATFLEENPATARIIMEKCMRSQRARQAAKRARDLTRRKGILESTSLPGK 413
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LADC P +SEIFIVEGDSAGGSAK+GR+ + Q I+ PL+ I A
Sbjct: 414 LADCREKDPSKSEIFIVEGDSAGGSAKEGRNSQNQAIL-PLRGKILNVEKA 463
>gi|315659991|ref|ZP_07912849.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
lugdunensis M23590]
gi|385782961|ref|YP_005759134.1| DNA gyrase subunit B [Staphylococcus lugdunensis N920143]
gi|418415558|ref|ZP_12988763.1| DNA gyrase subunit B [Staphylococcus lugdunensis ACS-027-V-Sch2]
gi|418635480|ref|ZP_13197855.1| DNA gyrase, B subunit [Staphylococcus lugdunensis VCU139]
gi|315494892|gb|EFU83229.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
lugdunensis M23590]
gi|339893217|emb|CCB52398.1| DNA gyrase subunit B [Staphylococcus lugdunensis N920143]
gi|374841747|gb|EHS05203.1| DNA gyrase, B subunit [Staphylococcus lugdunensis VCU139]
gi|410875014|gb|EKS22944.1| DNA gyrase subunit B [Staphylococcus lugdunensis ACS-027-V-Sch2]
Length = 644
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 246/461 (53%), Positives = 321/461 (69%), Gaps = 10/461 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYADQIEVI 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE LEV V R+ YHQ Y +G P L V D+ GT IRF D ++F
Sbjct: 129 SVVNALSEDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGETDKTGTVIRFKADSEIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +D++T+ RIRELAFLN ++I L+ E D E+ + + Y + GG++ YV+ +N +
Sbjct: 185 TETTVYDYDTLQKRIRELAFLNKGISITLKDERDDEEQRE-DTYHYEGGIKSYVELMNEN 243
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+P+H+ + + D I I++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHEEPIYIHQMKDDIEIEIAIQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTR 302
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G KSK +K+ LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 303 VLNSYGTKSKIIKEDKDRLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDK 362
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
EY +L +P+V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 363 LFSEYFERFLYENPNVARIIVEKGIMASRARVAAKKAREVTRRKSHLEISSLPGKLADCS 422
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
S P+ESEIFIVEGDSAGGS K+GRD R Q I+ PL+ I
Sbjct: 423 SKNPDESEIFIVEGDSAGGSTKEGRDSRTQAIL-PLRGKIL 462
>gi|52078497|ref|YP_077288.1| DNA gyrase subunit B [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423680393|ref|ZP_17655232.1| DNA gyrase subunit B [Bacillus licheniformis WX-02]
gi|52001708|gb|AAU21650.1| DNA gyrase (subunit B) [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|383441499|gb|EID49208.1| DNA gyrase subunit B [Bacillus licheniformis WX-02]
Length = 639
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/463 (51%), Positives = 318/463 (68%), Gaps = 11/463 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY + I VA+
Sbjct: 9 YDENQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCTEINVAIEK 68
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNS++V DNGRGIP+ +H + A+E ++TVLHAGGKF GS GY VSGGLHGVG SVV
Sbjct: 69 DNSITVKDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASVV 126
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS L+VTV+RDG ++Q++ RG P L + + GT F PD ++FT
Sbjct: 127 NALSTELDVTVYRDGKIHYQEFERGVPKADLKV----IGDTEVTGTTTHFKPDPEIFTET 182
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
++D++T+A R+RELAFL + I + ED K + NEY + GG++ YV+ LN ++
Sbjct: 183 TEYDYDTLATRVRELAFLTKGVKITI--EDKREGKERKNEYCYEGGIKSYVEHLNRSREV 240
Query: 317 LHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
+H+ V DGIT+++ALQ+ +D+Y+ + +AN+I T +GGTH G K LTR +N
Sbjct: 241 IHEEPVYIEGSKDGITVEVALQY-NDSYTSNIYSFANNIHTYEGGTHEAGFKTGLTRVIN 299
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+++ K+ D +LSGE VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 300 DYARRNGVFKESDPNLSGEDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDALFS 359
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L ++L +PD I+ K + A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 360 EALEKFLLENPDSAKKIVEKGVMAARARMAAKKARELTRRKSALEVSNLPGKLADCSSKD 419
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 420 PTISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 461
>gi|260655480|ref|ZP_05860968.1| DNA gyrase, B subunit [Jonquetella anthropi E3_33 E1]
gi|260629928|gb|EEX48122.1| DNA gyrase, B subunit [Jonquetella anthropi E3_33 E1]
Length = 640
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 241/468 (51%), Positives = 321/468 (68%), Gaps = 23/468 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+YG I VLEGLEAVR+RP MYIG T RGLHH VYEI+DN+VDE+ AGY +I V +
Sbjct: 12 SYGESGIVVLEGLEAVRRRPGMYIGDTTVRGLHHCVYEIVDNSVDESLAGYCGHITVTIG 71
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
D SVSV D+GRGIP+++H T KS +ETVLTVLHAGGKF S Y VSGGLHGVG+SV
Sbjct: 72 TDESVSVTDDGRGIPVEIHHQTGKSTVETVLTVLHAGGKFDNRS--YKVSGGLHGVGVSV 129
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALSE LEVTVWRDG EY Q+Y RG PV L LP R+GTR+RF D Q+F
Sbjct: 130 VNALSEWLEVTVWRDGYEYFQRYERGIPVAPL-AKTLP---STRRGTRVRFLADSQIF-D 184
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK- 314
+Q+ T+ R RE+AFL P LTI + D + + + GG+ E+V++LN D+
Sbjct: 185 EVQYSAETLVSRFREMAFLIPGLTITV----EDQREGKTWTFCEEGGIAEFVRYLNRDRV 240
Query: 315 ----KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 370
+PL V G R DG+++++A Q+ +D Y++ + +AN I T++GGTH+ G++++L
Sbjct: 241 VLFPEPLV-VSGER---DGVSVEMAFQY-TDDYNERLFSFANLIHTVEGGTHVAGLRSAL 295
Query: 371 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
TR +N +++ +++KD +LSGE +REGLTC++SV++ NP+FEGQTKT+LGN V+ V
Sbjct: 296 TRAVNEGARRAGALREKDENLSGEDLREGLTCVVSVKLSNPQFEGQTKTKLGNGTVKGSV 355
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
D + + L + + L I+ K++ A +A AAK+AR+LVR KS + SLPGKLAD
Sbjct: 356 DSVIYDGLLGHFDEDSSALKPIVDKAVKARQAREAAKKARELVR-KSAMSGLSLPGKLAD 414
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
CSS EE E++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 415 CSSKKAEECEVYIVEGDSAGGSAKQGRDRSFQAIL-PLRGKILNVEKA 461
>gi|430756787|ref|YP_007211252.1| DNA gyrase protein GyrA (subunit B) [Bacillus subtilis subsp.
subtilis str. BSP1]
gi|430021307|gb|AGA21913.1| DNA gyrase protein GyrA (subunit B) [Bacillus subtilis subsp.
subtilis str. BSP1]
Length = 643
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/464 (50%), Positives = 316/464 (68%), Gaps = 11/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I + +
Sbjct: 12 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIQIE 71
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+ +H + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 72 KDNSITVVDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 129
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS L+VTV RDG + Q Y RG PVT L + D GT F PD ++F+
Sbjct: 130 VNALSTELDVTVHRDGKIHRQTYKRGVPVTDLEI----IGETDHTGTTTHFVPDPEIFSE 185
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
++D++ +A R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 186 TTEYDYDLLANRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 243
Query: 316 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+H+ + + DGIT+++ALQ+ +D+Y+ + + N+I T +GGTH G K LTR +
Sbjct: 244 VVHEEPIYIEGEKDGITVEVALQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 302
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +K +K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 303 NDYARKKGLIKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 362
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
+ ++ +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 363 STAMETFMLENPDAAKKIVDKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 422
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 423 DPSISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 465
>gi|319648524|ref|ZP_08002740.1| DNA gyrase subunit B [Bacillus sp. BT1B_CT2]
gi|404487367|ref|YP_006711473.1| DNA gyrase subunit B [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52346363|gb|AAU38997.1| DNA gyrase beta subunit GyrB [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317389603|gb|EFV70414.1| DNA gyrase subunit B [Bacillus sp. BT1B_CT2]
Length = 637
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/463 (51%), Positives = 318/463 (68%), Gaps = 11/463 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY + I VA+
Sbjct: 7 YDENQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCTEINVAIEK 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNS++V DNGRGIP+ +H + A+E ++TVLHAGGKF GS GY VSGGLHGVG SVV
Sbjct: 67 DNSITVKDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS L+VTV+RDG ++Q++ RG P L + + GT F PD ++FT
Sbjct: 125 NALSTELDVTVYRDGKIHYQEFERGVPKADLKV----IGDTEVTGTTTHFKPDPEIFTET 180
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
++D++T+A R+RELAFL + I + ED K + NEY + GG++ YV+ LN ++
Sbjct: 181 TEYDYDTLATRVRELAFLTKGVKITI--EDKREGKERKNEYCYEGGIKSYVEHLNRSREV 238
Query: 317 LHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
+H+ V DGIT+++ALQ+ +D+Y+ + +AN+I T +GGTH G K LTR +N
Sbjct: 239 IHEEPVYIEGSKDGITVEVALQY-NDSYTSNIYSFANNIHTYEGGTHEAGFKTGLTRVIN 297
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+++ K+ D +LSGE VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 298 DYARRNGVFKESDPNLSGEDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDALFS 357
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L ++L +PD I+ K + A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 358 EALEKFLLENPDSAKKIVEKGVMAARARMAAKKARELTRRKSALEVSNLPGKLADCSSKD 417
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 418 PTISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 459
>gi|375086659|ref|ZP_09733061.1| DNA gyrase, B subunit [Megamonas funiformis YIT 11815]
gi|291532646|emb|CBL05759.1| DNA gyrase subunit B [Megamonas hypermegale ART12/1]
gi|374564516|gb|EHR35806.1| DNA gyrase, B subunit [Megamonas funiformis YIT 11815]
Length = 665
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/467 (51%), Positives = 328/467 (70%), Gaps = 13/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+ QIQ+LEGLEAVRKRP MYIGST RGLHHLVYE++DN++DEA AGY ++IEV
Sbjct: 34 VEGDYGANQIQILEGLEAVRKRPGMYIGSTSARGLHHLVYEVVDNSIDEALAGYCTHIEV 93
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V DNGRGIP+D+H + K A+E VLTVLHAGGKFGGS GY VSGGLHGVG
Sbjct: 94 TIHKDNSITVTDNGRGIPVDMH-ESGKPAVEVVLTVLHAGGKFGGS--GYKVSGGLHGVG 150
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS ++EV V RDG + + +G VT V V D GT + F PD ++
Sbjct: 151 VSVVNALSTNMEVKVKRDGKIHEITFEKG--VTKEPLKV--VGQTDETGTLVHFVPDAEI 206
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F + +D++T+ R+REL+FLN +TI L D PE+ + ++F GG+ +V+ LN
Sbjct: 207 FDETV-YDYDTLRHRLRELSFLNRGITIILT--DERPEEVRQETFYFEGGISSFVEHLNR 263
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K+ ++ + V F D +++ALQ+ + +YS+ + + N+I T +GGTH+ G K++LT
Sbjct: 264 NKEVINPEPVYFNGTKDTTVVEIALQYNT-SYSENIYSFVNNINTEEGGTHLAGFKSALT 322
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R N ++ +K+ + +L GE +REGLTC+IS+++ P+FEGQTKT+LGN EVR +VD
Sbjct: 323 RAANDFARRQGIIKNNEDNLVGEDIREGLTCVISIKLREPQFEGQTKTKLGNSEVRGIVD 382
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E L+EY E +P + I+ KS+ A +A AA++AR+L R+K+ L SSLPGKLADC
Sbjct: 383 SIVSEGLSEYFEENPVISKKIIEKSIMASRAREAARKARELTRRKNALEVSSLPGKLADC 442
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PE++EI++VEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 443 SVKDPEQAEIYLVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNVEKA 488
>gi|448585462|ref|ZP_21647855.1| DNA gyrase subunit B [Haloferax gibbonsii ATCC 33959]
gi|445726162|gb|ELZ77779.1| DNA gyrase subunit B [Haloferax gibbonsii ATCC 33959]
Length = 639
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/459 (51%), Positives = 315/459 (68%), Gaps = 11/459 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ IEVAL
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDAIEVALHE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSV DNGRGIP+D H ++ ALE ++TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVTDNGRGIPVDTHEQYDRPALEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS LEV V RDG + ++ G+P V ++ + GT IRFWPD +F T
Sbjct: 125 NALSSELEVEVKRDGAVWTHRFEFGEPQVDQFERVRDLEPDEDTGTTIRFWPDDGIFETT 184
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+FD T+ R+RELAFLN + I+L D + + + F GG+ E+V++LN K
Sbjct: 185 -EFDFKTLENRLRELAFLNSGVEISL----GDERTGESSTFLFEGGIREFVEYLNETKTA 239
Query: 317 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LHD ++ + + +GI +++A+Q +D ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 240 LHDDIIYYDDESEGIEVEIAMQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVN 298
Query: 376 SLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
+ D D +L GE VREGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 299 DYANTHDMLDDLDGDNLRGEDVREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESVT 358
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
+ L + E +PD +I+SK++ A +A AAK+A +L R+KS L S+SLPGKLADC S
Sbjct: 359 HQQLGTFFEENPDTATAIISKAVEAARARKAAKQAEELTRRKSALESTSLPGKLADCQSR 418
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P +SE+F+VEGDSAGGSAKQGRDR+FQ I+ PL+ I
Sbjct: 419 DPSKSELFVVEGDSAGGSAKQGRDRKFQAIL-PLKGKIL 456
>gi|357634545|ref|ZP_09132423.1| DNA gyrase, B subunit [Desulfovibrio sp. FW1012B]
gi|357583099|gb|EHJ48432.1| DNA gyrase, B subunit [Desulfovibrio sp. FW1012B]
Length = 806
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/459 (51%), Positives = 319/459 (69%), Gaps = 13/459 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y + I VLEGL AVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY I VA+
Sbjct: 10 QAYDASSITVLEGLSAVRKRPAMYIGSTDIRGLHHLVYEVVDNSIDEAMAGYCDRINVAV 69
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
D SV+V+DNGRGIP+D+HP ++ A+E V+TVLHAGGKF + Y VSGGLHGVG+S
Sbjct: 70 HLDGSVTVSDNGRGIPVDMHPKEHRPAVEVVMTVLHAGGKFDNDT--YKVSGGLHGVGVS 127
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALSE LEVTV R+G +Y Q+Y RG PVT +T + + GT IRF PD+++F
Sbjct: 128 VVNALSEYLEVTVRRNGKKYQQRYERGVPVTQVTV----IGEAENTGTTIRFKPDEEIFE 183
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
T QF H T+A R ELA+LN L I R D ++ Y F GG++ +V LN +
Sbjct: 184 TN-QFSHETLAKRFEELAYLNRGLEIDFR----DDRTSERVTYRFDGGIKRFVADLNAGE 238
Query: 315 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+HD++ ++DG+ +D ALQ+ ++ Y + + +AN+IRT +GGTH+ G K +LTR +
Sbjct: 239 PVIHDIIEGLAEMDGVVVDFALQYNAN-YKEEVYTFANNIRTREGGTHLAGFKTALTRGI 297
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N+ +K+ K L+G+ VREGLT +ISV++PNP+FEGQTKT+LGN EV +V + V
Sbjct: 298 NTYIEKADIPKKFKQKLTGDDVREGLTAVISVKLPNPQFEGQTKTKLGNSEVVGIVSKIV 357
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E + + E +P +I+ K++ A +A AA++A++LVR+K L SLPGKLADC S
Sbjct: 358 FEAINVHFEENPKDAKAIVEKAVDAARAREAARKAKELVRRKGALSDHSLPGKLADCQSK 417
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
PEESE++IVEGDSAGGSAKQGRD RFQ I+ PL+ I
Sbjct: 418 NPEESELYIVEGDSAGGSAKQGRDPRFQAIL-PLRGKIL 455
>gi|306821823|ref|ZP_07455415.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Eubacterium yurii
subsp. margaretiae ATCC 43715]
gi|304550130|gb|EFM38129.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Eubacterium yurii
subsp. margaretiae ATCC 43715]
Length = 649
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 236/471 (50%), Positives = 331/471 (70%), Gaps = 11/471 (2%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E V+ YG+EQIQVLEGLE VRKRP MYIGSTG +GLHHLVYE++DNA+DEA AG+ N
Sbjct: 11 EEKVNSEYGAEQIQVLEGLEPVRKRPGMYIGSTGSKGLHHLVYEVVDNAIDEALAGFCKN 70
Query: 130 IEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 189
I V++ +N ++V D+GRGIP+++HP T KS LETVLTVLHAGGKFG + GY VSGGLH
Sbjct: 71 IYVSIDVNNGITVIDDGRGIPVEVHPKTGKSTLETVLTVLHAGGKFG--AGGYKVSGGLH 128
Query: 190 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 249
GVG+SVVNALS+SL V +DG Y Q++ +G PV+ + HV+ + +GT I F PD
Sbjct: 129 GVGVSVVNALSKSLTAVVKKDGKIYKQEFEKGNPVSDV--HVVGDCPMEERGTCISFLPD 186
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 309
+ VF + + + R+RELAFLN ++I L ED+ + +Y + GG+ EYV+
Sbjct: 187 ETVFEETV-YSFEVLEHRLRELAFLNKGISITL--EDNRTIEKVTRKYHYEGGIIEYVKA 243
Query: 310 LNTDKKPLHDVVGFRKDVDGIT--IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
LN +++ L +V+ F K + + I++A+Q+ +DAY + + +AN+I T++GG H+ G K
Sbjct: 244 LNKNREALTEVIYFNKLDEEFSYDIEIAMQY-TDAYVENIYSFANNINTVEGGMHLIGFK 302
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
++LTR +N +K+ +K+KD + +GE +REGLT IISV++P P++EGQTKT+LGNP++R
Sbjct: 303 SALTRVVNDYARKNNMLKEKDENFTGEDIREGLTAIISVKLPEPQYEGQTKTKLGNPQMR 362
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
V+Q + + +LE +P I+ K + + +A AAKRARDL R+K +L S+SLPGK
Sbjct: 363 SSVEQITVDQVATFLEENPATARIIMEKCMRSQRARQAAKRARDLTRRKGILESTSLPGK 422
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LADC P +SEIFIVEGDSAGGSAK+GR+ + Q I+ PL+ I A
Sbjct: 423 LADCREKDPSKSEIFIVEGDSAGGSAKEGRNSQNQAIL-PLRGKILNVEKA 472
>gi|448470584|ref|ZP_21600499.1| DNA gyrase subunit B [Halorubrum kocurii JCM 14978]
gi|445807833|gb|EMA57913.1| DNA gyrase subunit B [Halorubrum kocurii JCM 14978]
Length = 645
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 235/466 (50%), Positives = 324/466 (69%), Gaps = 9/466 (1%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
P YG+ QIQVLEGL+AVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY +I
Sbjct: 2 PEQSEYGAGQIQVLEGLQAVRKRPAMYIGSTDGRGLHHLVYEVVDNSIDEALAGYCDDIT 61
Query: 132 VALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 191
V + DNSVSV+D+GRGIP+D H ++ ALE ++TVLHAGGKF S Y VSGGLHGV
Sbjct: 62 VTVHDDNSVSVSDDGRGIPVDTHEKYDRPALEVIMTVLHAGGKF--DSKSYQVSGGLHGV 119
Query: 192 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 251
G+SVVNALSE LEV V RDG Y +++RG+P V +D+ + GT IRFWPD++
Sbjct: 120 GVSVVNALSERLEVEVKRDGGVYRHEFARGEPAEDGFERVRDLDADEETGTYIRFWPDEE 179
Query: 252 VFTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQ 308
+F T F+ +T+A R+RELAFLN ++++L R E+S + + + GG+ E+V
Sbjct: 180 IFETT-DFEFSTLANRLRELAFLNSGVSVSLVDERDEESAADAGDEETFRYEGGIREFVG 238
Query: 309 WLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
+LN + P+H+ V+ F + D I +++A+Q ++ ++ +AN+I T +GGTH+ G K
Sbjct: 239 YLNETRTPIHEEVIYFEDEQDDIHVEVAMQ-ATEELQGSVHAFANNINTREGGTHLTGFK 297
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
+LTRT+N + V D + +L GE VREGLT +ISV+ P+P+FEGQTKT+LGN EVR
Sbjct: 298 TALTRTVNDYANEHGLVDDLEANLKGEDVREGLTAVISVKHPDPQFEGQTKTKLGNSEVR 357
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
+V+ + E L + E +PD ++ K+ A +A AAK+A +L R+KS L S++LPGK
Sbjct: 358 GIVESATHEKLGTFFEENPDTARKVVHKAAEAARARKAAKKAEELTRRKSALESTALPGK 417
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LADC + P E+E+F+VEGDSAGGSAKQGR+R Q I+ PL+ I
Sbjct: 418 LADCQTRDPTEAELFVVEGDSAGGSAKQGRNRENQAIL-PLKGKIL 462
>gi|220930856|ref|YP_002507764.1| DNA gyrase subunit B [Halothermothrix orenii H 168]
gi|219992166|gb|ACL68769.1| DNA gyrase, B subunit [Halothermothrix orenii H 168]
Length = 642
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 248/478 (51%), Positives = 329/478 (68%), Gaps = 15/478 (3%)
Query: 63 IATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEA 122
+A E+F N Y +E IQVLEGLEAVRKRP MYIGSTG GLHHLVYE++DN++DEA
Sbjct: 1 MAEESFLNN--KGNYEAEHIQVLEGLEAVRKRPGMYIGSTGMDGLHHLVYEVVDNSIDEA 58
Query: 123 QAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGY 182
GY IEV + N ++V DNGRGIP+D HP K A+E VLTVLHAGGKFGG GY
Sbjct: 59 MQGYCDLIEVIIKPGNIITVKDNGRGIPVDPHPKLKKPAVEVVLTVLHAGGKFGGD--GY 116
Query: 183 SVSGGLHGVGLSVVNALSESLEVTV-WRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQG 241
VSGGLHGVG+SVVNALS+ LEV V WRDG YHQKY+RG PV L + G
Sbjct: 117 KVSGGLHGVGVSVVNALSKWLEVEVCWRDGKVYHQKYNRGIPVYDLKV----IGECSGTG 172
Query: 242 TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG 301
T I F PD+++F + F + +A R++ELAFLN + I LR D E+ + +EY F G
Sbjct: 173 TTISFKPDEEIFED-VNFKYKVLAQRLKELAFLNKGVRIILR--DEREEEARQDEYCFEG 229
Query: 302 GLEEYVQWLNTDKKPLHDVVGFRKDVD-GITIDLALQWCSDAYSDTMLGYANSIRTIDGG 360
GL +V++LN +K PL D + ++ D +++A+Q+ +D Y D++ +AN+I T +GG
Sbjct: 230 GLVSFVKYLNKNKNPLFDEPFYLEEKDENREVEIAIQY-NDGYVDSIFTFANNINTREGG 288
Query: 361 THIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTR 420
TH+ G K++LTRT+N + +K+ D +L+GE +REG+T IISVR+ +P+FEGQTKT+
Sbjct: 289 THLSGFKSALTRTVNDYARSKGILKENDENLTGEDIREGITAIISVRLTDPQFEGQTKTK 348
Query: 421 LGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLR 480
LGN E+R VD ++ L +LE +P + I+ K+ SA +A AAK+AR+L R+K L
Sbjct: 349 LGNSEIRGFVDSALSSNLRTFLEENPKIGKIIVEKARSAARARKAAKKARELTRRKGALS 408
Query: 481 SSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
+++LPGKLADCSS E +EI+IVEGDSAGGSAKQGRDR+FQ I+ PL+ I A
Sbjct: 409 NTALPGKLADCSSRDTENTEIYIVEGDSAGGSAKQGRDRKFQAIL-PLRGKILNVEKA 465
>gi|448562398|ref|ZP_21635356.1| DNA gyrase subunit B [Haloferax prahovense DSM 18310]
gi|445718716|gb|ELZ70400.1| DNA gyrase subunit B [Haloferax prahovense DSM 18310]
Length = 639
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/459 (52%), Positives = 315/459 (68%), Gaps = 11/459 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ IEVAL
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDAIEVALHE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSV DNGRGIP+D H ++ ALE ++TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVTDNGRGIPVDTHEQYDRPALEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS LEV V RDG + ++ G+P V ++ + GT IRFWPD +F T
Sbjct: 125 NALSGKLEVEVKRDGAVWTHRFEFGEPQVDEFERVRDLEPDEDTGTTIRFWPDDGIFETT 184
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+FD T+ R+RELAFLN + I+L D + + + F GG+ E+V++LN K
Sbjct: 185 -EFDFKTLENRLRELAFLNSGVEISL----GDERTGESSTFLFEGGIREFVEYLNETKTA 239
Query: 317 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LHD ++ + + +GI +++A+Q +D ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 240 LHDDIIYYDDESEGIEVEIAMQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVN 298
Query: 376 SLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
+ D D +L GE VREGLT +IS++ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 299 DYANTHDMLDDLDGDNLRGEDVREGLTAVISIKPPDPQFEGQTKTKLGNSEVRGIVESVT 358
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
+ L + E +PD +I+SK++ A +A AAK+A +L R+KS L S+SLPGKLADC S
Sbjct: 359 HQQLGTFFEENPDTTTAIISKAVEAARARKAAKQAEELTRRKSALESTSLPGKLADCQSR 418
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P ESE+FIVEGDSAGGSAKQGRDR+FQ I+ PL+ I
Sbjct: 419 DPAESELFIVEGDSAGGSAKQGRDRKFQAIL-PLKGKIL 456
>gi|448624637|ref|ZP_21670585.1| DNA gyrase subunit B [Haloferax denitrificans ATCC 35960]
gi|445749842|gb|EMA01284.1| DNA gyrase subunit B [Haloferax denitrificans ATCC 35960]
Length = 639
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/459 (52%), Positives = 317/459 (69%), Gaps = 11/459 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ IEV+L
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDAIEVSLHE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSV DNGRGIP+D H ++ ALE ++TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVTDNGRGIPVDTHEQYDRPALEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS LEV V RDG + ++ G+P V ++ + GT IRFWPD +F T
Sbjct: 125 NALSSELEVEVKRDGAVWTHRFEFGEPQVDEFERVRDLEPGEDTGTTIRFWPDDGIFETT 184
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+FD T+ R+RELAFLN + I+L E +D + + + F GG+ E+V++LN K
Sbjct: 185 -EFDFKTLENRLRELAFLNSGVEISLADERTD----ESSSFRFEGGIREFVEYLNETKTA 239
Query: 317 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LHD ++ + + +GI +++A+Q +D ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 240 LHDDIIYYDDESEGIEVEIAMQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVN 298
Query: 376 SLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
+ D D +L GE VREGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 299 DYANTHDMLDDLDGDNLRGEDVREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESVT 358
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
+ L + E +PD +I+SK++ A +A AAK+A +L R+KS L S++LPGKLADC S
Sbjct: 359 HQQLGTFFEENPDTATAIISKAVEAARARKAAKQAEELTRRKSALESTALPGKLADCQSR 418
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P ESE+FIVEGDSAGGSAKQGRDR+FQ I+ PL+ I
Sbjct: 419 DPSESELFIVEGDSAGGSAKQGRDRKFQAIL-PLKGKIL 456
>gi|422344230|ref|ZP_16425156.1| DNA gyrase, B subunit [Selenomonas noxia F0398]
gi|355377549|gb|EHG24766.1| DNA gyrase, B subunit [Selenomonas noxia F0398]
Length = 684
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 247/480 (51%), Positives = 323/480 (67%), Gaps = 15/480 (3%)
Query: 62 SIATEAFKE--NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAV 119
+I TE + V YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLVYE++DN++
Sbjct: 40 AIGTEEMGDEVTAVDADYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVYEVVDNSI 99
Query: 120 DEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSS 179
DEA AGY N+EV + DNS++V DNGRGIP+D+H + A+E VLTVLHAGGKFGG
Sbjct: 100 DEALAGYCDNVEVVIHKDNSITVTDNGRGIPVDMH-ESGMPAVEVVLTVLHAGGKFGGD- 157
Query: 180 SGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDR 239
GY VSGGLHGVG+SVVNALS S+EV V RDG Y ++RG V L + + +
Sbjct: 158 -GYKVSGGLHGVGVSVVNALSSSMEVEVRRDGKIYEISFTRGVTVNKLH----EIGTSET 212
Query: 240 QGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFF 299
GTR+ F PD ++FT + T+ R+RELAFLN +TI L D E+ + + F
Sbjct: 213 TGTRVHFVPDPEIFTVT-TYSFETLKHRLRELAFLNHGITITLV--DERGEEERRETFHF 269
Query: 300 AGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTID 358
GG+ +V LN K+ +++ + F D +++A+Q+ +D+Y + + + N+I T +
Sbjct: 270 EGGIRSFVSHLNRKKETINEEPIYFNGVKDDTVVEIAMQY-NDSYQENIYSFVNNINTEE 328
Query: 359 GGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTK 418
GGTH+ G K +LTR N + +KDKD +LSGE VREGLTC+IS++V P+FEGQTK
Sbjct: 329 GGTHLAGFKIALTRAANDFARCLSVLKDKDGNLSGEDVREGLTCVISLKVREPQFEGQTK 388
Query: 419 TRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSV 478
T+LGN EVR +VD V E LTEY E +P + +L K L A +A AA++AR+L R+K+
Sbjct: 389 TKLGNSEVRGIVDSIVTEGLTEYFEENPAITKKVLEKGLMASRAREAARKARELTRRKNA 448
Query: 479 LRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
L SSLPGKLADCS P++ EI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 449 LEVSSLPGKLADCSVKDPDQCEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNVEKA 507
>gi|325567637|ref|ZP_08144304.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus
casseliflavus ATCC 12755]
gi|420261794|ref|ZP_14764438.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus sp. C1]
gi|325159070|gb|EGC71216.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus
casseliflavus ATCC 12755]
gi|394771728|gb|EJF51489.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus sp. C1]
Length = 649
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/466 (51%), Positives = 323/466 (69%), Gaps = 11/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DEA AG+AS+I+V
Sbjct: 12 AKAYDASQIQVLEGLEAVRKRPGMYIGSTSSEGLHHLVWEIVDNSIDEALAGFASSIQVI 71
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++V D+GRGIP+D+ T + A+ETV T+LHAGGKFGG S LHGVG
Sbjct: 72 IEPDNSITVVDDGRGIPVDIQAKTGRPAVETVFTILHAGGKFGGGGYKVSGG--LHGVGS 129
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS +L+V V+++G Y+Q+Y RG V L +D DR GT + F PD ++F
Sbjct: 130 SVVNALSTTLDVKVYKEGKVYYQEYHRGAVVDDLKV----IDETDRHGTTVHFVPDPEIF 185
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +F+ + +A R+RELAFLN L I++ ED EK EY + GG++ YV+ LN
Sbjct: 186 TETTEFNFDKLATRVRELAFLNRGLKISI--EDKREEKPVLKEYHYDGGIKSYVEHLNAS 243
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K + D + + GIT+++++Q+ +D+Y +L +AN+I T +GGTH G K +LTR
Sbjct: 244 KTVIFPDPIYLEGEQQGITVEVSMQY-TDSYHSNLLSFANNIHTYEGGTHEFGFKTALTR 302
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N +KSK +K+ D +L+GE VREGLT +IS++ P+P+FEGQTKT+LGN EVR V D+
Sbjct: 303 VINDYARKSKLMKENDENLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEVRTVTDR 362
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ T++L +P+V ++ K L A KA AAKRAR++ R+K L S+LPGKLADCS
Sbjct: 363 LFSEHFTKFLMENPNVGRQVVEKGLLASKARQAAKRAREMTRRKGALEISNLPGKLADCS 422
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PE+ E+FIVEGDSAGGSAKQGR R FQ I+ P++ I A
Sbjct: 423 SNDPEKCELFIVEGDSAGGSAKQGRSREFQAIL-PIRGKILNVEKA 467
>gi|295694693|ref|YP_003587931.1| DNA gyrase subunit B [Kyrpidia tusciae DSM 2912]
gi|295410295|gb|ADG04787.1| DNA gyrase, B subunit [Kyrpidia tusciae DSM 2912]
Length = 635
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 241/464 (51%), Positives = 319/464 (68%), Gaps = 14/464 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
TY QIQVLEGLEAVRKRP MYIG+T RGLHHLV+E++DN++DEA AGY +I V +
Sbjct: 8 TYDESQIQVLEGLEAVRKRPGMYIGATSSRGLHHLVWEVVDNSIDEALAGYCDHIVVRVN 67
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNSV+V DNGRGIP+ HP K +E VLTVLHAGGKF G GY VSGGLHGVG+SV
Sbjct: 68 PDNSVTVIDNGRGIPVGTHPKLGKPTVEVVLTVLHAGGKFDGK--GYKVSGGLHGVGVSV 125
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALSE LEV VWR+G Y Q+YSRG PVT L + DR GT++ F PD ++F
Sbjct: 126 VNALSEWLEVEVWREGSAYRQRYSRGVPVTPLER----LGPTDRTGTQVTFKPDPEIFED 181
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
+ F ++ + GR+RELAFLN +TI L D + E+ + GG+ +V++LN K+
Sbjct: 182 VV-FQYDILQGRLRELAFLNAGITIIL----EDARDGRRQEFAYQGGIRSFVEYLNRSKE 236
Query: 316 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
LH V + D + +++ALQ+ +D Y ++ +AN+I T +GGTH G K++LTR +
Sbjct: 237 VLHQPPVYIAAEKDDVMVEVALQY-NDGYVPSLYSFANNIHTHEGGTHESGFKSALTRVI 295
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +K+ +KD D +++GE VREGLT IISV++P+P+FEGQTKT+LGN EVR +V+ +
Sbjct: 296 NDYARKNNLLKDSDSNVTGEDVREGLTAIISVKIPDPQFEGQTKTKLGNSEVRGIVESAF 355
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E +LE +P V I+ K ++A +A AA++AR+L R+K+ L SSLPGKL DCSS
Sbjct: 356 GERFVVFLEENPAVARKIVDKCITAARAREAARKARELTRRKNALEVSSLPGKLWDCSSK 415
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
ESE+++VEGDSAGGSAK GRDR FQ I+ PL+ I A
Sbjct: 416 DASESELYLVEGDSAGGSAKSGRDRHFQAIL-PLRGKILNVEKA 458
>gi|406829974|gb|AFS63977.1| DNA gyrase subunit B [Cloacibacillus sp. CL-84]
Length = 647
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/463 (49%), Positives = 319/463 (68%), Gaps = 13/463 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ I VLEGLEAVRKRP MYIG RGLHHLVYE++DN++DE+ AG+ I V +
Sbjct: 20 YTAKDIHVLEGLEAVRKRPGMYIGDQSQRGLHHLVYEVVDNSIDESLAGFCDTINVTINP 79
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV+V DNGRGIP +LH + KSA E VLTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 80 DGSVTVIDNGRGIPTELHE-SGKSAAEVVLTVLHAGGKF--DKSAYQVSGGLHGVGVSVV 136
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS LE+T+WRDG E+HQ+Y RG P+T L + +GTR++F PD ++F+T
Sbjct: 137 NALSVWLELTIWRDGKEHHQRYERGIPMTQLEV----TGDTELRGTRVQFMPDDEIFSTT 192
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+F + + R+RELAFLN +TI ED EK + Y + GG+ +V++LN K+
Sbjct: 193 -EFQADILKQRLRELAFLNSHITINF--EDQRSEKPEKKSYHYPGGISAFVEYLNKGKEV 249
Query: 317 L-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
L + V + D +++A+Q+ +D Y + + G+ N I TI+GGTH+ G ++++TR +N
Sbjct: 250 LFKEPVVINGEKDKTQLEVAIQY-NDTYIERLFGFVNLINTIEGGTHVAGFRSAMTRAIN 308
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+K K +K+KD +LSG+ ++EGLT +ISV+V P+FEGQTKT+LGN +V+ +VD V
Sbjct: 309 DEARKLKILKEKDANLSGDDLKEGLTAVISVKVMEPQFEGQTKTKLGNNDVKGIVDSIVY 368
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L L+ P++L I+ +L A +A AAK+A++LVR+KSV+ +LPGKL+DCS+
Sbjct: 369 EGLKNALDERPEILKPIVESALRARQAREAAKKAKELVRRKSVMSGLTLPGKLSDCSNRN 428
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P + EI+IVEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 429 PADCEIYIVEGDSAGGSAKQGRNREFQAIL-PLRGKILNVEKA 470
>gi|386756586|ref|YP_006229802.1| DNA topoisomerase IV subunit B [Bacillus sp. JS]
gi|384929868|gb|AFI26546.1| DNA topoisomerase IV subunit B [Bacillus sp. JS]
Length = 638
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/464 (50%), Positives = 315/464 (67%), Gaps = 11/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY +I + +
Sbjct: 7 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCKDINIQIE 66
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+ +H + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 67 KDNSITVVDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 124
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS L+VTV RDG + Q Y RG PV+ L + D GT F PD ++FT
Sbjct: 125 VNALSTELDVTVHRDGKIHRQTYKRGVPVSDLEI----IGETDHTGTTTHFVPDPEIFTE 180
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
++D++ +A R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 181 TTEYDYDLLANRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 238
Query: 316 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+H+ + + DGIT+++ALQ+ +D+Y+ + + N+I T +GGTH G K LTR +
Sbjct: 239 VVHEEPIYIEGEKDGITVEVALQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 297
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +K +K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 298 NDYARKKGLIKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 357
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
+ ++ +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 358 SAAMETFMLENPDAAKKIVDKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 417
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 418 DPSISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 460
>gi|314935205|ref|ZP_07842558.1| DNA gyrase, B subunit [Staphylococcus hominis subsp. hominis C80]
gi|313656540|gb|EFS20279.1| DNA gyrase, B subunit [Staphylococcus hominis subsp. hominis C80]
Length = 644
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 244/466 (52%), Positives = 323/466 (69%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 71 IENDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V R+ YHQ Y +G P L V S ++ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGSTEKTGTVIRFKADSEIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
+ +++ T+ RIRELAFLN ++I LR E D E+ + + Y + GG++ YV+ LN +
Sbjct: 185 SETTVYNYETLQKRIRELAFLNKGISITLRDEREDKEQRE-DTYHYEGGIKSYVELLNEN 243
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTR 302
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G +SK +KD LSGE REGLT ++SV+ NP+FEGQTKT+LGN EVR++VD+
Sbjct: 303 VLNSYGTQSKIIKDDKERLSGEDTREGLTAVVSVKHGNPQFEGQTKTKLGNSEVRQIVDR 362
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P+V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPNVARIIVEKGIMASRARVAAKKAREVTRRKSALEISSLPGKLADCS 422
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P+ESEIF+VEGDSAGGS K+GRD + Q I+ PL+ I A
Sbjct: 423 SKNPDESEIFLVEGDSAGGSTKEGRDSKTQAIL-PLRGKILNVEKA 467
>gi|154249648|ref|YP_001410473.1| DNA gyrase subunit B [Fervidobacterium nodosum Rt17-B1]
gi|154153584|gb|ABS60816.1| DNA gyrase, B subunit [Fervidobacterium nodosum Rt17-B1]
Length = 650
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/458 (50%), Positives = 315/458 (68%), Gaps = 16/458 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ IQVL+GLE VR+RP MYIGSTG GLHHLVYEI+DN++DEA G+ I+V + +
Sbjct: 21 YNAQNIQVLKGLEPVRQRPGMYIGSTGKNGLHHLVYEIVDNSIDEALQGFCDTIKVTIKS 80
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV V DNGRGIP+D+HP T SALE V+T LHAGGKF S S Y VSGGLHGVG SVV
Sbjct: 81 DGSVEVEDNGRGIPVDIHPETGTSALEVVMTTLHAGGKF--SKSSYKVSGGLHGVGASVV 138
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE +EV V RDG Y Q+Y+RG T V + +++GT +RF PDK +FTT
Sbjct: 139 NALSEWMEVEVHRDGKIYRQRYARG----VKTTEVEVIGETNKRGTIVRFKPDKLIFTTT 194
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+FD +TI R+R+LAFLNP +TI E +D ++ + +AGGL+E++ LN K
Sbjct: 195 -EFDSDTILTRLRDLAFLNPSITIEFVDERNDIKRTLH----YAGGLKEFIAHLNKGSKT 249
Query: 317 LHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNS 376
LH+VV + +A Q+ +D +T++ + N+I+TIDGGTH+ G K + TR +N
Sbjct: 250 LHEVVVIDGSQQDCEVHIAFQY-TDEDGETIVSFVNNIKTIDGGTHVTGFKTAFTRVVNE 308
Query: 377 LGKKSKTVKDKDISLSGEHVREGLTCIISV-RVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
LGKK +K + GE +REG+T +++V + P+FEGQTK++LGN E++ V + V+
Sbjct: 309 LGKKKNLIKGE--PFKGEDLREGMTAVVNVLMMGTPQFEGQTKSKLGNEEIQDAVAKVVR 366
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
+ LT+Y E++ VL I+ K+ A +A AAKRAR+ V++KS L +S+LPGKLADC +
Sbjct: 367 DKLTDYFEVNETVLKIIIQKAQQAREAREAAKRAREAVKRKSALGASTLPGKLADCITKN 426
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
EE+E+FIVEGDSAGGSAKQ RDR FQ I+ PL+ I
Sbjct: 427 FEEAELFIVEGDSAGGSAKQARDRNFQAIL-PLRGKIL 463
>gi|317050926|ref|YP_004112042.1| DNA gyrase subunit B [Desulfurispirillum indicum S5]
gi|316946010|gb|ADU65486.1| DNA gyrase, B subunit [Desulfurispirillum indicum S5]
Length = 799
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/468 (51%), Positives = 320/468 (68%), Gaps = 20/468 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ YG++ I+VLEGLEAVRKRP MYIGSTG GLHHLVYE++DN++DEA AG+ +EV +
Sbjct: 4 QAYGADSIKVLEGLEAVRKRPGMYIGSTGITGLHHLVYEVVDNSIDEALAGHCDTVEVVI 63
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DNS++V DNGRGIP + H N+SA E VLTVLHAGGKF SS Y VSGGLHGVG+S
Sbjct: 64 HTDNSITVTDNGRGIPTEFHKEQNRSAAEVVLTVLHAGGKF--DSSSYKVSGGLHGVGIS 121
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALSE LE+ + RDG + Q Y RG P L V GT+IRF PD Q+F
Sbjct: 122 VVNALSEELELEIKRDGKIHRQSYRRGFPQQPLEV----VGETRSTGTKIRFLPDSQIFE 177
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
T +F + ++ R+RE AFLN +TI + +D + N + + GGL +V +LN +K
Sbjct: 178 TT-EFSYEILSNRLREQAFLNAGVTIII----TDERVEKTNTFLYEGGLRSFVTFLNKNK 232
Query: 315 KPLH----DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 370
+ LH V G + D I +++ALQ+ +D Y++T+ YAN+I T+DGGTH+ G K++L
Sbjct: 233 QTLHPEPVHVAGEKND---IIVEIALQY-NDTYAETLFTYANNINTVDGGTHLVGFKSAL 288
Query: 371 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
TR +N+ +K + I+LSG+ +REGLT +ISV++P+P+FEGQTK +LG E + VV
Sbjct: 289 TRCINTYISTAKIKGSEKITLSGDDIREGLTAVISVKIPDPQFEGQTKGKLGTTEAKSVV 348
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
+ E YLE +PDV IL+K+++A +A AA++AR+L R+K VL +SLPGKLAD
Sbjct: 349 ESIFGEKFAAYLEENPDVAKQILNKAINAARAREAARKARELTRRKGVLEGNSLPGKLAD 408
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
CS P +SE++IVEGDSAGGSAKQGRDRR Q I+ PL+ I A
Sbjct: 409 CSEKDPAKSELYIVEGDSAGGSAKQGRDRRNQAIL-PLKGKILNVEKA 455
>gi|424845289|ref|ZP_18269900.1| DNA gyrase, B subunit [Jonquetella anthropi DSM 22815]
gi|363986727|gb|EHM13557.1| DNA gyrase, B subunit [Jonquetella anthropi DSM 22815]
Length = 640
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 241/468 (51%), Positives = 321/468 (68%), Gaps = 23/468 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+YG I VLEGLEAVR+RP MYIG T RGLHH VYEI+DN+VDEA AG+ +I V +
Sbjct: 12 SYGESGIVVLEGLEAVRRRPGMYIGDTTVRGLHHCVYEIVDNSVDEALAGHCGHITVTIG 71
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
D SVSV D+GRGIP+++H T KS +ETVLTVLHAGGKF S Y VSGGLHGVG+SV
Sbjct: 72 TDESVSVTDDGRGIPVEIHHQTGKSTVETVLTVLHAGGKFDNRS--YKVSGGLHGVGVSV 129
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALSE LEVTVWRDG EY Q+Y RG PV L LP R+GTR+RF D Q+F
Sbjct: 130 VNALSEWLEVTVWRDGYEYFQRYERGIPVAPL-AKTLP---STRRGTRVRFLADSQIF-D 184
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK- 314
+Q+ T+ R RE+AFL P LTI + D + + + GG+ E+V++LN D+
Sbjct: 185 EVQYSAETLVSRFREMAFLIPGLTITV----EDQREGKTWTFCEEGGIAEFVRYLNRDRV 240
Query: 315 ----KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 370
+PL V G R DG+++++A Q+ +D Y++ + +AN I T++GGTH+ G++++L
Sbjct: 241 VLFPEPLV-VSGER---DGVSVEMAFQY-TDDYNERLFSFANLIHTVEGGTHVAGLRSAL 295
Query: 371 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
TR +N +++ +++KD +LSGE +REGLTC++SV++ NP+FEGQTKT+LGN V+ V
Sbjct: 296 TRAVNEGARRAGALREKDENLSGEDLREGLTCVVSVKLSNPQFEGQTKTKLGNGTVKGSV 355
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
D + + L + + L I+ K++ A +A AAK+AR+LVR KS + SLPGKLAD
Sbjct: 356 DSVIYDGLLGHFDEDSSALKPIVDKAVKARQAREAAKKARELVR-KSAMSGLSLPGKLAD 414
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
CSS EE E++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 415 CSSKKAEECEVYIVEGDSAGGSAKQGRDRSFQAIL-PLRGKILNVEKA 461
>gi|385799929|ref|YP_005836333.1| DNA gyrase subunit B [Halanaerobium praevalens DSM 2228]
gi|309389293|gb|ADO77173.1| DNA gyrase subunit B [Halanaerobium praevalens DSM 2228]
Length = 638
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/466 (48%), Positives = 322/466 (69%), Gaps = 12/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y + QIQVL+GLEAVRKRP MYIGSTG +GLHHLV+E++DN++DE AG I+V
Sbjct: 7 NKDYNANQIQVLKGLEAVRKRPGMYIGSTGIKGLHHLVWEVVDNSIDEFLAGNGDQIKVT 66
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ ++V D GRGIP D H T A++ VLT LHAGGKF SS Y VSGGLHGVG+
Sbjct: 67 IHQGEEITVEDFGRGIPADTHQETGLPAVQVVLTTLHAGGKFNNSS--YKVSGGLHGVGV 124
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS LE+T +G +Y Q Y +G PV L + +R GT IRF PD ++F
Sbjct: 125 SVVNALSSELEITTHWEGHKYQQHYKKGAPVDKLK----KIGKTERSGTIIRFKPDSEIF 180
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T A +F +A R++E A+LN +LT++LR D E+ E+ + GG++ +V++LN D
Sbjct: 181 T-AREFKFENLAHRLQESAYLNKELTLSLR--DERGEEVVEKEFQYDGGIKAFVEFLNKD 237
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
+ ++ D++ F D +++A+Q+ +D Y++ + YAN+I TIDGG H+ G K +LTR
Sbjct: 238 RNIINNDIIYFESKPDDYEVEIAVQY-NDGYNERIFSYANNINTIDGGYHLTGFKTALTR 296
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N+ K + + K SL+G+ VREG+T +I+V++P P+FEGQTKT+LGN E+R +V+
Sbjct: 297 AVNNFAKNNNKLPAKISSLNGKDVREGITAVINVKLPEPQFEGQTKTKLGNSEIRSIVES 356
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
V +YL+ Y + +PD+ I+ K++ A++A A+K+AR+L ++K+ L S+SLPGKLADCS
Sbjct: 357 EVYQYLSLYFDTNPDLAKKIIDKAVQAVRARKASKKARELTKRKTALSSNSLPGKLADCS 416
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S EESE+FIVEGDSAGGSAKQGR+R+FQ I+ PL+ I A
Sbjct: 417 SKKSEESELFIVEGDSAGGSAKQGRERKFQAIL-PLKGKILNVERA 461
>gi|399889393|ref|ZP_10775270.1| DNA gyrase subunit B [Clostridium arbusti SL206]
Length = 636
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 235/464 (50%), Positives = 323/464 (69%), Gaps = 20/464 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA G+ NI +
Sbjct: 5 NEVYDESQIQVLEGLEAVRKRPGMYIGSTSLRGLHHLVYEIVDNSIDEALGGFCENISIT 64
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNSVS+ D+GRG+P+ +H NK +E ++TVLHAGGKFGGS GY VSGGLHGVG
Sbjct: 65 IHEDNSVSIVDDGRGMPVGIHHKMNKPTVEVIMTVLHAGGKFGGS--GYKVSGGLHGVGA 122
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE+ EV V R+G + Q Y RG + + + GT+I F PD +F
Sbjct: 123 SVVNALSETCEVIVKREGHIWRQLYHRGNVASPFE----EIGDTEEHGTQINFKPDSDIF 178
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
I+F ++T+A R+RELAFLN + I E D E + + + GG++ +V +LN +
Sbjct: 179 E-EIEFSYDTLAQRLRELAFLNKGIKINFIDERHDKE----DTFHYEGGIKSFVSYLNRN 233
Query: 314 KKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
K+P+ + G++ D +++ALQ+ +D Y++ + +AN+I T++GGTH+ G K++
Sbjct: 234 KEPVFPEPIYIEGYKDDY---AVEIALQY-NDGYAENLFSFANNIDTVEGGTHLAGFKSA 289
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
LTR LN +K +K+ D +LSG+ +REGLT +IS+++ NP+FEGQTKT+LGN EVR +
Sbjct: 290 LTRALNDYARKFNFIKENDKNLSGDDIREGLTAVISIKLSNPQFEGQTKTKLGNSEVRGI 349
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
VD + E ++ +LE +P V I+ KSL A +A AAK+AR+L R+KSVL +++LPGKLA
Sbjct: 350 VDNILGEKVSAFLEENPQVGKLIIDKSLLAARARDAAKKARELTRRKSVLETTALPGKLA 409
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
DCSS P E EI+IVEGDSAGGSAKQGRDR+FQ I+ PL+ I
Sbjct: 410 DCSSKDPAECEIYIVEGDSAGGSAKQGRDRKFQAIL-PLRGKIM 452
>gi|313126396|ref|YP_004036666.1| DNA gyrase subunit b [Halogeometricum borinquense DSM 11551]
gi|448286238|ref|ZP_21477473.1| DNA gyrase subunit B [Halogeometricum borinquense DSM 11551]
gi|312292761|gb|ADQ67221.1| DNA gyrase subunit B [Halogeometricum borinquense DSM 11551]
gi|445575289|gb|ELY29768.1| DNA gyrase subunit B [Halogeometricum borinquense DSM 11551]
Length = 637
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 237/458 (51%), Positives = 320/458 (69%), Gaps = 11/458 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY I V++
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGYCDEIGVSVHE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSV DNGRGIP+D H ++ A+E ++TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVTDNGRGIPVDTHEQYDRPAVEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LEV + RDG + ++ +G+P V ++S + GT IRF PD +F T
Sbjct: 125 NALSEWLEVEIKRDGALWRHRFDQGEPDQEAFERVRDLESDEDTGTTIRFKPDGDIFET- 183
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
++FD T+ R+RELAFLN + I+L +D+D + + ++F GG+ E+V++LN K
Sbjct: 184 LEFDFTTLENRLRELAFLNSGVEISLADDDADEQSS----FYFEGGIREFVRYLNETKST 239
Query: 317 LHDVVGFRKDVD-GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LHD V + D D GI +++A+Q ++ ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 240 LHDDVIYYDDEDEGIEVEVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTRVVN 298
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+ + + D D SL GE +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 299 DYARSNNLLDDLD-SLKGEDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESVTH 357
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L Y E +P +I+ K++ A KA AAK+A +L R+KS L S++LPGKLADC S
Sbjct: 358 EQLGTYFEENPGTAQAIVMKAVEAAKARRAAKKAEELTRRKSALESTALPGKLADCQSRD 417
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P ESE+F+VEGDSAGGSAKQGRDR+FQ I+ P++ I
Sbjct: 418 PSESELFVVEGDSAGGSAKQGRDRKFQAIL-PIKGKIL 454
>gi|406671602|ref|ZP_11078841.1| DNA gyrase subunit B [Facklamia hominis CCUG 36813]
gi|405580852|gb|EKB54911.1| DNA gyrase subunit B [Facklamia hominis CCUG 36813]
Length = 639
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/463 (50%), Positives = 312/463 (67%), Gaps = 11/463 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DNA+DEA AGY ++IEV +
Sbjct: 10 YNADQIQVLEGLEAVRKRPGMYIGSTSEEGLHHLVWEIVDNAIDEALAGYCNHIEVTIEK 69
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
+NS++V DNGRGIP+D+ T + A+ETV TVLHAGGKFGG S Y VSGGLHGVG SVV
Sbjct: 70 NNSITVTDNGRGIPVDIQHKTGRPAVETVYTVLHAGGKFGGGS--YKVSGGLHGVGASVV 127
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS L V V R G Y ++ RG +T + + + GTR+ F PD +FT
Sbjct: 128 NALSSQLSVEVSRSGKVYRIEFERG----NITSELKVIGDHEETGTRVNFVPDPTIFTET 183
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
++ N + RIRELAFLN L I L + D EK YF+ GG++ YV +LN DK+
Sbjct: 184 TEYRFNILNERIRELAFLNKNLRITLVDKREDREKEV--SYFYEGGIKSYVSYLNEDKEV 241
Query: 317 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
L + + +++GIT+++ALQ+ + AY + +AN+I T +GGTH G K SLTR +N
Sbjct: 242 LFSEPIYLEGELEGITVEIALQYTT-AYETIINSFANNIHTHEGGTHESGFKTSLTRVIN 300
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+++ +K+ + +L+GE REGL I+S++ P+P+FEGQTKT+LGN EVR V D+
Sbjct: 301 DYARRANLIKESESNLTGEDTREGLVAIVSIKHPDPQFEGQTKTKLGNSEVRTVTDRLFS 360
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
+ +L +P + +I+ K + A KA AAKRAR++ R+KS L ++LPGKLADCSS
Sbjct: 361 SHFETFLLENPKIARTIVDKGILASKARHAAKRAREITRKKSGLEIANLPGKLADCSSKD 420
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
E+ E+FIVEGDSAGGSAKQGR R +Q I+ P++ I A
Sbjct: 421 AEKCELFIVEGDSAGGSAKQGRSRLYQAIL-PIRGKILNVEKA 462
>gi|452991700|emb|CCQ96924.1| DNA gyrase (subunit B) [Clostridium ultunense Esp]
Length = 636
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/465 (49%), Positives = 327/465 (70%), Gaps = 14/465 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y +E+IQVL GLE VRKRP MYIGSTG RGLHHLVYE++DN++DEA AG I++ +
Sbjct: 8 RIYTAEEIQVLTGLEPVRKRPGMYIGSTGSRGLHHLVYEVVDNSIDEALAGVCDTIKIVI 67
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DNS+ V DNG GIP+++HP T KS +ETVLT+LHAGGKF ++S Y VSGGLHGVG+S
Sbjct: 68 EKDNSILVEDNGSGIPVEIHPQTGKSTVETVLTILHAGGKF--NNSAYKVSGGLHGVGVS 125
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALSE L V RDG EY QK+ RG PV+ L V GT I F PDK++F
Sbjct: 126 VVNALSEWLIAKVKRDGKEYMQKFERGVPVSELQI----VGEAKTTGTLINFKPDKEIFD 181
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
+ F+ T+ R+RE+AFLN + I L D N ++ + GG++ +V+++N +K
Sbjct: 182 -EVDFNFETLEYRLREMAFLNKGIMIKL----EDRRTNTNRKFHYEGGIKSFVEYINRNK 236
Query: 315 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
P+H D++ F + D I ++LA+Q+ +DAYS+ + +AN+I T +GGTH+ G++ +LTR
Sbjct: 237 NPIHKDIMYFEAEKDNIVVELAMQY-TDAYSENIYTFANNINTQEGGTHLSGLRTALTRA 295
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N G+K +K+KD +L G+ VREGL+ ++SV++ P+FEGQTKT+LGN EVR +V+
Sbjct: 296 INDYGRKYNYIKEKDENLQGDDVREGLSAVLSVKLMEPQFEGQTKTKLGNSEVRGIVESL 355
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
+++T YLE +P +L K++SA +A AA++AR++ R++S+L +++LPGKLADC S
Sbjct: 356 TYDFITRYLEENPKSGKIVLEKAVSASRAREAARKAREISRKRSILDNTTLPGKLADCQS 415
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
E +EI+IVEGDSAGGSAKQGRDR +Q I+ PL+ I A
Sbjct: 416 NDLEITEIYIVEGDSAGGSAKQGRDRGYQAIL-PLRGKILNVEKA 459
>gi|448473611|ref|ZP_21601753.1| DNA gyrase subunit B [Halorubrum aidingense JCM 13560]
gi|445819123|gb|EMA68972.1| DNA gyrase subunit B [Halorubrum aidingense JCM 13560]
Length = 645
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 240/466 (51%), Positives = 322/466 (69%), Gaps = 9/466 (1%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
P YG+ QIQVLEGL+AVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY +I
Sbjct: 2 PEQSEYGAGQIQVLEGLQAVRKRPAMYIGSTDGRGLHHLVYEVVDNSIDEALAGYCDDIT 61
Query: 132 VALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 191
V + AD SV V D+GRGIP+D H ++ ALE ++TVLHAGGKF S Y VSGGLHGV
Sbjct: 62 VTIHADGSVGVTDDGRGIPVDTHEKYDRPALEVIMTVLHAGGKF--DSKSYQVSGGLHGV 119
Query: 192 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 251
G+SVVNALSE LEV V RDG Y +++RG+PV V ++ + GT IRFWPD +
Sbjct: 120 GVSVVNALSERLEVEVKRDGGVYRHEFARGEPVEDGFERVRDMEEGESTGTYIRFWPDSE 179
Query: 252 VFTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQ 308
+F T +F +T+A R+RELAFLN +T+A +ED+D E F + GG+ E+V
Sbjct: 180 IFETT-EFAFSTLANRLRELAFLNSGVAITLADEREDADISDAGDEETFRYDGGIREFVA 238
Query: 309 WLNTDKKPLHDVVGFRKDVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
+LN + P+HD V + D D I +++A+Q ++ ++ +AN+I T +GGTH+ G K
Sbjct: 239 YLNETRTPIHDDVIYFADEDADIHVEVAMQ-ATEELQGSVHAFANNINTREGGTHLTGFK 297
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
+LTRT+N + V D D +L GE VREGLT +ISV+ P+P+FEGQTKT+LGN EVR
Sbjct: 298 TALTRTVNDYANEHGLVDDLDANLKGEDVREGLTAVISVKHPDPQFEGQTKTKLGNSEVR 357
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
+V+ + E L + E +PD ++ K+ A +A AAK+A +L R+KS L S++LPGK
Sbjct: 358 GIVESATHEKLGTFFEENPDTARKVVHKAAEAARARKAAKKAEELTRRKSALESTALPGK 417
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LADC + PEE+E+F+VEGDSAGGSAKQGR+R+ Q I+ PL+ I
Sbjct: 418 LADCQTRDPEEAELFVVEGDSAGGSAKQGRNRKNQAIL-PLKGKIL 462
>gi|76802387|ref|YP_327395.1| DNA topoisomerase II subunit B (DNA gyrase) [Natronomonas pharaonis
DSM 2160]
gi|76558252|emb|CAI49840.1| DNA gyrase subunit B [Natronomonas pharaonis DSM 2160]
Length = 639
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/458 (51%), Positives = 320/458 (69%), Gaps = 9/458 (1%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DNA+DEA AGY IEV +
Sbjct: 7 YSAGQIQVLEGLEAVRKRPAMYIGSTDTRGLHHLVYEVVDNAIDEALAGYCDTIEVVIND 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV+V D+GRGIP+D H ++ A+E ++TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVTVRDDGRGIPVDTHEDHDRPAVEVIMTVLHAGGKF--DSKSYQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS+ LEV + RDG +H ++ G+P L V +D + GT IRFWPD +F T
Sbjct: 125 NALSKWLEVEIKRDGHVWHHRFDHGEPENGLE-QVREMDPNESTGTEIRFWPDDDIFETT 183
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
F +T+ R+RELAFLNP + I +R D PE+ + + + GG+ E+V +LN +
Sbjct: 184 -DFTFSTLESRLRELAFLNPGVGITIR--DERPEEPDASTFEYDGGIREFVAYLNETRDV 240
Query: 317 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LH+ ++ F + D I +++A+Q + ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 241 LHENIIYFEDEEDDIHVEVAMQ-ATAGVQGSIHAFANNINTREGGTHLTGFKTALTRVIN 299
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+ +KD D +L GE +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ +V
Sbjct: 300 DYATSNGMLKDLDGNLKGEDIREGLTAVISIKHPDPQFEGQTKTKLGNGEVRGIVESAVH 359
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L +LE HPD ++I+SK++ A KA AAK+A +L R+KS L S+SLPGKL+DC +
Sbjct: 360 EELATHLEEHPDTAEAIISKAVEAAKARKAAKKAEELTRRKSALESTSLPGKLSDCQTRD 419
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
PEESE+F+VEGDSAGGSAKQGR+ FQ I+ PL+ I
Sbjct: 420 PEESELFVVEGDSAGGSAKQGRNPEFQAIL-PLRGKIL 456
>gi|121889|sp|P21558.1|GYRB_HALSQ RecName: Full=DNA gyrase subunit B
gi|99223|pir||A39135 DNA topoisomerase chain B homolog - Haloferax sp
gi|149024|gb|AAB09605.1| DNA gyrase beta-subunit [Haloferax lucentense DSM 14919]
gi|1899004|gb|AAB49900.1| DNA gyrase beta-subunit [Shuttle vector pMDS20]
Length = 639
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 239/459 (52%), Positives = 315/459 (68%), Gaps = 11/459 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ IEVAL
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDAIEVALHE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSV DNGRGIP+ H ++ ALE ++TVLHAGGKF S Y VSGGLHGVG++VV
Sbjct: 67 DGSVSVTDNGRGIPVGTHEQYDRPALEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVTVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS LEV V DG + ++ G+P V ++ + GT IRFWPD +F T
Sbjct: 125 NALSSELEVEVKHDGAVWTHRFEVGEPQVEEFERVRDLEPGEDTGTTIRFWPDDGIFETT 184
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+FD T+ R+RELAFLN + I+L SD ++ + + F GG+ E+V++LN K
Sbjct: 185 -EFDFKTLENRLRELAFLNSGVEISL----SDERTDESSTFLFEGGIREFVEYLNETKTA 239
Query: 317 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LHD V+ + + +GI +++A+Q +D ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 240 LHDDVIYYDDESEGIEVEIAMQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVN 298
Query: 376 SLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
+ D D +L GE VREGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 299 DYANSHDMLDDLDGDNLRGEDVREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESVT 358
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
+ L + E +PD +I+SK++ A +A AAK+A +L R+KS L S+SLPGKLADC S
Sbjct: 359 HQQLGTFFEENPDTATAIISKAVEAARARKAAKQAEELTRRKSALESTSLPGKLADCQSR 418
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P ESE+FIVEGDSAGGSAKQGRDR+FQ I+ PL+ I
Sbjct: 419 DPSESELFIVEGDSAGGSAKQGRDRKFQAIL-PLKGKIL 456
>gi|257875897|ref|ZP_05655550.1| DNA gyrase B subunit [Enterococcus casseliflavus EC20]
gi|257810063|gb|EEV38883.1| DNA gyrase B subunit [Enterococcus casseliflavus EC20]
Length = 649
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/466 (51%), Positives = 322/466 (69%), Gaps = 11/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DEA AG+AS+I+V
Sbjct: 12 AKAYDASQIQVLEGLEAVRKRPGMYIGSTSSEGLHHLVWEIVDNSIDEALAGFASSIQVI 71
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++V D+GRGIP+D+ T + A+ETV T+LHAGGKFGG S LHGVG
Sbjct: 72 IEPDNSITVVDDGRGIPVDIQAKTGRPAVETVFTILHAGGKFGGGGYKVSGG--LHGVGS 129
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS +L+V V+++G Y+Q+Y RG V L +D DR GT + F PD ++F
Sbjct: 130 SVVNALSTTLDVKVYKEGKVYYQEYHRGAVVDDLKV----IDETDRHGTTVHFVPDPEIF 185
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T F+ + +A R+RELAFLN L I++ ED EK EY + GG++ YV+ LN
Sbjct: 186 TETTVFNFDKLATRVRELAFLNRGLKISI--EDKREEKPVLKEYHYDGGIKSYVEHLNAS 243
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K + D + + GIT+++++Q+ +D+Y +L +AN+I T +GGTH G K +LTR
Sbjct: 244 KTVIFPDPIYLEGEQQGITVEVSMQY-TDSYHSNLLSFANNIHTYEGGTHEFGFKTALTR 302
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N +KSK +K+ D +L+GE VREGLT +IS++ P+P+FEGQTKT+LGN EVR V D+
Sbjct: 303 VINDYARKSKLMKENDENLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEVRTVTDR 362
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ T++L +P+V ++ K L A KA AAKRAR++ R+K L S+LPGKLADCS
Sbjct: 363 LFSEHFTKFLMENPNVGRQVVEKGLLASKARQAAKRAREMTRRKGALEISNLPGKLADCS 422
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PE+ E+FIVEGDSAGGSAKQGR R FQ I+ P++ I A
Sbjct: 423 SNDPEKCELFIVEGDSAGGSAKQGRSREFQAIL-PIRGKILNVEKA 467
>gi|350264106|ref|YP_004875413.1| DNA gyrase subunit B [Bacillus subtilis subsp. spizizenii TU-B-10]
gi|349596993|gb|AEP84781.1| DNA gyrase, B subunit [Bacillus subtilis subsp. spizizenii TU-B-10]
Length = 638
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/464 (50%), Positives = 315/464 (67%), Gaps = 11/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I + +
Sbjct: 7 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIQIE 66
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+ +H + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 67 KDNSITVIDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 124
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS L VTV RDG + Q Y RG PV+ L + D GT F PD ++FT
Sbjct: 125 VNALSTELVVTVHRDGKIHRQTYKRGVPVSDLEI----IGETDHTGTTTHFVPDPEIFTE 180
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
++D++ +A R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 181 TTEYDYDLLANRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 238
Query: 316 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+H+ + + DGIT+++ALQ+ +D+Y+ + + N+I T +GGTH G K LTR +
Sbjct: 239 VVHEEPIYIEGEKDGITVEVALQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 297
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +K +K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 298 NDYARKKGLIKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 357
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
+ ++ +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 358 STAMETFMLENPDAAKKIVDKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 417
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 418 DPSISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 460
>gi|375098341|ref|ZP_09744604.1| DNA gyrase, B subunit [Saccharomonospora cyanea NA-134]
gi|374659073|gb|EHR58951.1| DNA gyrase, B subunit [Saccharomonospora cyanea NA-134]
Length = 654
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/473 (48%), Positives = 319/473 (67%), Gaps = 21/473 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + I VLEGLEAVRKRP MYIGSTG RGLHHL+ E++DN+VDEA AG+A+ +EV LLA
Sbjct: 8 YNASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIQEVVDNSVDEAMAGFATRVEVTLLA 67
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D V V D+GRGIP+D+HP K LE VLT LHAGGKF S Y+VSGGLHGVG+SVV
Sbjct: 68 DGGVRVVDDGRGIPVDIHPVHGKPTLEIVLTQLHAGGKF--DSKSYAVSGGLHGVGVSVV 125
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS +L+V V +G + Q Y + P +L DR GT + FW D ++F T
Sbjct: 126 NALSTALDVEVHYNGKVWVQHYEKSVP-----GDLLDKGPTDRTGTSVTFWADPEIFETT 180
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKE--DSDPEKNQYNE--------YFFAGGLEEY 306
+ T+A R++E+AFLN LTI LR E +P+++ E Y++ GGLE++
Sbjct: 181 T-YSAETVARRLQEMAFLNKGLTIVLRDERVSEEPDEDATGERAGIKERTYYYPGGLEDF 239
Query: 307 VQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 365
V+ +N K+ +H V+ F + +G+ +++A+QW S ++ ++ +AN+I T +GGTH EG
Sbjct: 240 VKHINASKEAIHPTVISFDQKGEGLEVEVAMQWNS-GFTPSVYTFANTINTHEGGTHEEG 298
Query: 366 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 425
+A+LTR +N+ + K +K+KD +L+G+ VREGL I+SV++ P+FEGQTKT+LGN E
Sbjct: 299 FRAALTRVVNAYARDKKLLKEKDANLTGDDVREGLAAIVSVKLAEPQFEGQTKTKLGNSE 358
Query: 426 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 485
R V + E+L ++ E +P I++K++S+ +A LAA++ARDLVR+K + LP
Sbjct: 359 ARSFVQTTCNEWLADWFERNPAEAKIIINKAVSSAQARLAARKARDLVRRKGAMDIGGLP 418
Query: 486 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
GKL DC S PEE E++IVEGDSAGGSAK+GRD RFQ I+ P++ I A
Sbjct: 419 GKLKDCRSRNPEECELYIVEGDSAGGSAKEGRDSRFQAIL-PIRGKIINVEKA 470
>gi|311070653|ref|YP_003975576.1| DNA gyrase subunit B [Bacillus atrophaeus 1942]
gi|419820961|ref|ZP_14344565.1| DNA gyrase subunit B [Bacillus atrophaeus C89]
gi|310871170|gb|ADP34645.1| DNA gyrase subunit B [Bacillus atrophaeus 1942]
gi|388474872|gb|EIM11591.1| DNA gyrase subunit B [Bacillus atrophaeus C89]
Length = 638
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/464 (51%), Positives = 315/464 (67%), Gaps = 11/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY S I + +
Sbjct: 7 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCSEINIEIE 66
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+ + + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 67 KDNSITVRDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 124
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS +L+VTV RDG ++Q Y RG P+ + + D GT F PD ++FT
Sbjct: 125 VNALSTTLDVTVHRDGKIHYQAYERGVPMADVEV----IGETDTTGTITHFVPDPEIFTE 180
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
+D++ ++ R+RELAFL + I + ED EK Q NEY + GG++ YV++LN K+
Sbjct: 181 TTVYDYDLLSSRVRELAFLTKGVKITI--EDKREEKEQKNEYCYEGGIKSYVEYLNRSKE 238
Query: 316 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+H+ + DGIT+++ALQ+ +D+Y+ + +AN+I T +GGTH G K LTR +
Sbjct: 239 VVHEEPIYIEGTKDGITVEVALQY-NDSYTSNIYSFANNINTYEGGTHEAGFKTGLTRVI 297
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +K K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 298 NDYARKKGIFKESDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDALF 357
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E L +L +PD ++ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 358 SEALETFLFENPDSARKVIDKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 417
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 418 DPSISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 460
>gi|322370371|ref|ZP_08044930.1| DNA gyrase, B subunit [Haladaptatus paucihalophilus DX253]
gi|320550079|gb|EFW91734.1| DNA gyrase, B subunit [Haladaptatus paucihalophilus DX253]
Length = 638
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 240/453 (52%), Positives = 316/453 (69%), Gaps = 10/453 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY +I+V +
Sbjct: 7 YSAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGYCDSIDVTIHE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNSVS+AD+GRGIP+D H + ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DNSVSIADDGRGIPVDRHEEYDMPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGISVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE +V V RDG + Q + RG P + V + + GT RFWPD ++F T
Sbjct: 125 NALSEKFDVEVKRDGGVWKQTFERGDPAGEME-RVRDMRDDEETGTYQRFWPDTEIFETT 183
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
F ++T+ R+RELAFLN + I L E D EK + + ++GG+ E+V++LN K
Sbjct: 184 -DFTYSTLENRLRELAFLNSGVAITLADE-RDEEKG--DTFHYSGGIREFVEYLNETKTA 239
Query: 317 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LH +V+ F + D I +++A+Q +D ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 240 LHNEVIYFEDEDDNIQVEVAMQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVN 298
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+ + D D +L GE +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ +V
Sbjct: 299 DYANDNDMLGDLDENLRGEDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESAVH 358
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L+ Y E HPD +I+SK++ A KA AAK+A +L R+KS L SS+LPGKLADC S
Sbjct: 359 EGLSVYFEEHPDTAQAIISKAVEAAKARKAAKKAEELTRRKSALESSALPGKLADCQSRD 418
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPL 528
P +SE+F+VEGDSAGGSAKQ RDR FQ I+ PL
Sbjct: 419 PTKSELFVVEGDSAGGSAKQARDREFQAIL-PL 450
>gi|257866280|ref|ZP_05645933.1| DNA gyrase B subunit [Enterococcus casseliflavus EC30]
gi|257873204|ref|ZP_05652857.1| DNA gyrase B subunit [Enterococcus casseliflavus EC10]
gi|257800238|gb|EEV29266.1| DNA gyrase B subunit [Enterococcus casseliflavus EC30]
gi|257807368|gb|EEV36190.1| DNA gyrase B subunit [Enterococcus casseliflavus EC10]
Length = 649
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/466 (51%), Positives = 322/466 (69%), Gaps = 11/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DEA AG+AS+I+V
Sbjct: 12 AKAYDASQIQVLEGLEAVRKRPGMYIGSTSSEGLHHLVWEIVDNSIDEALAGFASSIQVI 71
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++V D+GRGIP+D+ T + A+ETV T+LHAGGKFGG S LHGVG
Sbjct: 72 IEPDNSITVVDDGRGIPVDIQAKTGRPAVETVFTILHAGGKFGGGGYKVSGG--LHGVGS 129
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS +L+V V+++G Y+Q+Y RG V L +D DR GT + F PD ++F
Sbjct: 130 SVVNALSTTLDVKVYKEGKVYYQEYHRGAVVDDLKV----IDETDRHGTTVHFVPDPEIF 185
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T F+ + +A R+RELAFLN L I++ ED EK EY + GG++ YV+ LN
Sbjct: 186 TETTVFNFDKLATRVRELAFLNRGLKISI--EDKREEKPVLKEYHYDGGIKSYVEHLNAS 243
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K + D + + GIT+++++Q+ +D+Y +L +AN+I T +GGTH G K +LTR
Sbjct: 244 KTVIFPDPIYLEGEQQGITVEVSMQY-TDSYHSNLLSFANNIHTYEGGTHEFGFKTALTR 302
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N +KSK +K+ D +L+GE VREGLT +IS++ P+P+FEGQTKT+LGN EVR V D+
Sbjct: 303 VINDYARKSKLMKENDENLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEVRTVTDR 362
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ T++L +P+V ++ K L A KA AAKRAR++ R+K L S+LPGKLADCS
Sbjct: 363 LFSEHFTKFLMENPNVGRQVVEKGLLASKARQAAKRAREMTRRKGALEISNLPGKLADCS 422
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PE+ E+FIVEGDSAGGSAKQGR R FQ I+ P++ I A
Sbjct: 423 SNDPEKCELFIVEGDSAGGSAKQGRSREFQAIL-PIRGKILNVEKA 467
>gi|78043837|ref|YP_361487.1| DNA gyrase subunit B [Carboxydothermus hydrogenoformans Z-2901]
gi|77995952|gb|ABB14851.1| DNA gyrase, B subunit [Carboxydothermus hydrogenoformans Z-2901]
Length = 635
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 240/458 (52%), Positives = 335/458 (73%), Gaps = 15/458 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+E+IQVL+GLE VRKRPAMYIGST +GLHHLVYE++DN++DEA AG+ + IEV +
Sbjct: 10 YGAEEIQVLKGLEGVRKRPAMYIGSTNEKGLHHLVYEVVDNSIDEALAGFCNRIEVIIHK 69
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D S++VADNGRGIP+D+HP K A+E VLT+LHAGGKFGG VSGGLHGVG+SVV
Sbjct: 70 DGSITVADNGRGIPVDIHPEVGKPAVEVVLTMLHAGGKFGGGGY--KVSGGLHGVGVSVV 127
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LEV + RDG Y+QK+SRG+P+T L + GT I F PD ++F T
Sbjct: 128 NALSEWLEVRIKRDGNLYYQKFSRGEPITELKI----IGKSKSTGTIITFKPDAEIFET- 182
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKK 315
++F+++T+A R+ EL++LN + I L+ E + E E F +GG+++Y+++LN +K+
Sbjct: 183 VEFNYDTLAKRLLELSYLNKNVKIILKDERINKE-----EIFEHSGGIKDYLKYLNKNKE 237
Query: 316 PLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
PLH ++ F K+ D + +++ALQ+C +++S+ +L + N+I T +GGTH G K +LTR +N
Sbjct: 238 PLHKIIYFEKEKDEVVVEVALQYC-NSFSENILSFTNNINTTEGGTHEIGFKTALTRVIN 296
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
KK +K+ ++SL GE +REGLT IISV+VP+P+FEGQTKT+L N EVR +VD V
Sbjct: 297 DYAKKYNLIKENNLSLQGEDIREGLTAIISVKVPDPQFEGQTKTKLVNTEVRSIVDSIVS 356
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
+YL+ YLE +P V ++ ++ A +A AA++AR+L R+K+ L S++LPGKLADCS
Sbjct: 357 DYLSTYLEENPAVGKKLIENAIRAARAREAARKARELARRKTALESNTLPGKLADCSEKD 416
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P E+++VEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 417 PSLCELYLVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 453
>gi|448502584|ref|ZP_21612697.1| DNA gyrase subunit B [Halorubrum coriense DSM 10284]
gi|445694079|gb|ELZ46214.1| DNA gyrase subunit B [Halorubrum coriense DSM 10284]
Length = 638
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 235/458 (51%), Positives = 318/458 (69%), Gaps = 10/458 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGL+AVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY IEV +
Sbjct: 7 YGAGQIQVLEGLQAVRKRPAMYIGSTDGRGLHHLVYEVVDNSIDEALAGYCEEIEVRIHD 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSV+D+GRGIP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVSDDGRGIPVDTHEEYDRPALEVILTVLHAGGKF--DSKSYQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LEV V RDG + +++RG+P V + GT IRFWPD+++F T
Sbjct: 125 NALSERLEVEVTRDGGVFRHRFARGEPAEDGFERVRDAGPDESTGTEIRFWPDEEIFETT 184
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
F +T+A R+RELAFLN + I L + D + + + GG+ E+V++LN + P
Sbjct: 185 -DFQTSTLANRLRELAFLNSGVEIRLVDDRDDTAET----FRYDGGIREFVEYLNETRSP 239
Query: 317 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
+H DV+ F + DG+ +++A+Q ++ ++ +AN+I T +GGTH+ G K +LTRT+N
Sbjct: 240 IHEDVIYFEGESDGVHVEVAMQ-ATEELQGSVHAFANNINTREGGTHLTGFKTALTRTVN 298
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+ V D D +L GE VREGLT ++SV+ P+P+FEGQTKT+LGN EVR VV+ +
Sbjct: 299 DYANEHGLVDDLDANLKGEDVREGLTAVVSVKHPDPQFEGQTKTKLGNSEVRGVVESATH 358
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L + E +PD + ++ K+ A +A AAK+A +L R+KS L S++LPGKLADC +
Sbjct: 359 EKLGTFFEENPDTAEKVVHKAAEAARARKAAKKAEELTRRKSALESTALPGKLADCQTRD 418
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
PEE+E+F+VEGDSAGGSAKQGR+R Q I+ PL+ I
Sbjct: 419 PEEAELFVVEGDSAGGSAKQGRNRENQAIL-PLKGKIL 455
>gi|410723309|ref|ZP_11362553.1| DNA gyrase, B subunit [Clostridium sp. Maddingley MBC34-26]
gi|410603355|gb|EKQ57790.1| DNA gyrase, B subunit [Clostridium sp. Maddingley MBC34-26]
Length = 635
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 239/464 (51%), Positives = 320/464 (68%), Gaps = 21/464 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AGY IEV
Sbjct: 5 NKKYDENQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSIDEALAGYCRKIEVN 64
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS+ V D+GRG+P+ +HP KS +E ++T+LHAGGKFGG GY VSGGLHGVG
Sbjct: 65 INEDNSIKVTDDGRGMPVGIHPKMGKSTVEVIMTILHAGGKFGG--EGYKVSGGLHGVGA 122
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE VTV RDG + QKYSRGK + LT + D GT F PD ++F
Sbjct: 123 SVVNALSEECTVTVKRDGHIWQQKYSRGKVLNELT----QIGDSDETGTETYFKPDVEIF 178
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
I +D ++ R+RELAFLN + I L + D E+ + + GG++ +V +LN +
Sbjct: 179 DETI-YDFEILSQRLRELAFLNKGIYIKLIDKRYDKEE----VFHYEGGIKSFVSYLNRN 233
Query: 314 KKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
K PLH+ + G + D +++++ALQ+ +D Y++ + +AN+I T++GGTH+ G K +
Sbjct: 234 KVPLHEEPIYIEGLK---DNVSVEIALQY-NDGYTENIFTFANNIDTVEGGTHLIGFKTA 289
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
LTR N KK +K+ D + +G+ +REGLT +ISV++ P+FEGQTKT+LGN EVR +
Sbjct: 290 LTRVFNDYAKKFGHIKENDKNFTGDDIREGLTAVISVKIEEPQFEGQTKTKLGNSEVRGI 349
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
VD V E + +LE +P++ I+ K+L A +A AA++AR+L R KSVL S+LPGKLA
Sbjct: 350 VDSIVGENIGVFLEENPNIGKMIVDKALMAARARDAARKARELTR-KSVLERSTLPGKLA 408
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
DCSS P E EI+IVEGDSAGGSAKQGR+R+FQ I+ PL+ I
Sbjct: 409 DCSSKDPRECEIYIVEGDSAGGSAKQGRNRKFQAIL-PLRGKIL 451
>gi|339501434|ref|YP_004699469.1| DNA gyrase subunit B [Spirochaeta caldaria DSM 7334]
gi|338835783|gb|AEJ20961.1| DNA gyrase, B subunit [Spirochaeta caldaria DSM 7334]
Length = 635
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/456 (50%), Positives = 321/456 (70%), Gaps = 19/456 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y ++ IQVL+GLEAVRKRP MYIGSTG GLHHLVYE++DN+VDEA G+ ++I V L
Sbjct: 4 SYSAQSIQVLKGLEAVRKRPGMYIGSTGIDGLHHLVYEVVDNSVDEAMQGHCTDILVVLE 63
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
++ V V DNGRGIP+D+HP+ SALE V+T LHAGGKF +S Y VSGGLHGVG+SV
Sbjct: 64 KNDIVRVEDNGRGIPVDIHPSEKVSALELVMTKLHAGGKFDKNS--YKVSGGLHGVGVSV 121
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-T 254
VNALS EV V RDG ++QKY G P ++ + + +++GT +RF D +F T
Sbjct: 122 VNALSTWCEVFVHRDGKIHYQKYHIGVPEESVKV----IGTTNKRGTIVRFLADATIFET 177
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
T FD ++ R+RELAFLN + I++R E K+ +E+ F GG+ +V++LN +K
Sbjct: 178 TTYNFD--VLSNRLRELAFLNKGIRISIRDERLTTPKS--HEFIFEGGVVSFVEYLNQNK 233
Query: 315 KPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 370
LH + G R D++ ++ A+Q+ +D +++ M + N I T +GGTH+ G K++L
Sbjct: 234 TVLHKECIYIAGTRDDIE---VECAIQY-NDGFNEIMFSFVNDINTREGGTHLVGFKSAL 289
Query: 371 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
TRTLN KKSK K + SLSG+ VREGLT ++SV+VPNP+FEGQTK +LGN EV+ +V
Sbjct: 290 TRTLNEYLKKSKLAKKMEESLSGDDVREGLTAVLSVKVPNPQFEGQTKGKLGNSEVKGIV 349
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
+ V E L +L+ HPD++++IL KS+ A KA +AA++ARD R+K+++ S+ LPGKLAD
Sbjct: 350 ESLVNEQLELFLDQHPDIVNAILEKSVLAAKARIAARQARDATRRKNLMESAGLPGKLAD 409
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIIN 526
CS P + E+FIVEGDSAGGSAK GR+R FQ I++
Sbjct: 410 CSEKDPTKCELFIVEGDSAGGSAKMGRNRAFQAILS 445
>gi|342216026|ref|ZP_08708673.1| DNA gyrase, B subunit [Peptoniphilus sp. oral taxon 375 str. F0436]
gi|341586916|gb|EGS30316.1| DNA gyrase, B subunit [Peptoniphilus sp. oral taxon 375 str. F0436]
Length = 640
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/469 (49%), Positives = 326/469 (69%), Gaps = 18/469 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y + IQVL GLE VRKRP MYIGSTGP+GLHHLVYE++DN++DEA AG I++ L
Sbjct: 6 RNYSASDIQVLTGLEPVRKRPGMYIGSTGPKGLHHLVYEVVDNSIDEALAGICDTIQIQL 65
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DN VS+ DNG GIP+++HP T KS +ETVLT+LHAGGKF ++ Y VSGGLHGVG+S
Sbjct: 66 EKDNWVSIIDNGSGIPVEIHPQTGKSTVETVLTILHAGGKF--NNGAYKVSGGLHGVGVS 123
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTL----TCHVLPVDSKDRQGTRIRFWPDK 250
VVNALS+ L TV RDG Y Q++S+G +T L TC K+ GT+I F PD+
Sbjct: 124 VVNALSKHLIATVKRDGKIYQQEFSKGDTLTKLKEIGTC------GKEEHGTKISFCPDE 177
Query: 251 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWL 310
++FT +F + +A R RE+AFLN + I + +K Y+ + GG++ +V++L
Sbjct: 178 EIFTETTEFSYEVLAKRFREMAFLNKGVKIVFEDQRETEKKETYH---YEGGIKSFVEFL 234
Query: 311 NTDKKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
N K P+H V + + V +GI++++A+Q+ +D+YS+ +L +AN+I T +GGTH+ G +++
Sbjct: 235 NKKKTPVHQEVIYMEQVKEGISVEVAMQY-TDSYSENILTFANNIHTEEGGTHLSGFRSA 293
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
LTR++N G++ +K+K+ +LSGE VREG+T IISV++P P+FEGQTK +LGN E R +
Sbjct: 294 LTRSINEYGRQYNLIKEKEENLSGEDVREGITGIISVKLPQPQFEGQTKAKLGNSEARTI 353
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
VD V E L +LE +P + +IL K+LSA +A AA++ARDL R++S+L S+ LPGKL
Sbjct: 354 VDAVVTENLETFLEENPKISKAILQKALSARRAREAARKARDLTRKRSILDSTVLPGKLQ 413
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
DC + +EIF+VEGDSAGGSAK GRD Q I+ PL+ I A
Sbjct: 414 DCQLDDNKVTEIFLVEGDSAGGSAKGGRDHMTQAIL-PLRGKIMNVEKA 461
>gi|304437923|ref|ZP_07397869.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Selenomonas sp. oral
taxon 149 str. 67H29BP]
gi|304369063|gb|EFM22742.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Selenomonas sp. oral
taxon 149 str. 67H29BP]
Length = 685
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 246/468 (52%), Positives = 321/468 (68%), Gaps = 15/468 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLVYE++DN++DEA AGY + V
Sbjct: 54 VDADYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVYEVVDNSIDEALAGYCDTVGV 113
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V DNGRGIP+D+H + A+E VLTVLHAGGKFGG GY VSGGLHGVG
Sbjct: 114 TIHKDNSITVTDNGRGIPVDMH-ESGMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVG 170
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS ++V V RDG + +SRG VTT H + + D GTR+ F PD ++
Sbjct: 171 VSVVNALSTEMDVEVRRDGKIFAISFSRG--VTTTKLH--EIGTSDTTGTRVHFVPDPEI 226
Query: 253 FT-TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLN 311
FT T FD T+ R+RELAFLN +TI L E +++ + F GG+ +V LN
Sbjct: 227 FTVTTYSFD--TLKHRLRELAFLNHGITITLTDERGTEVRSE--TFHFDGGIRSFVSHLN 282
Query: 312 TDKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 370
K+ +++ + F D I +++A+Q+ +D+Y + + + N+I T +GGTH+ G K +L
Sbjct: 283 RKKETINEEPIYFNGVKDDIVVEIAMQY-NDSYQENIYSFVNNINTEEGGTHLAGFKIAL 341
Query: 371 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
TR N ++ +KDKD +LSGE VREGLT +IS++V P+FEGQTKT+LGN EVR +V
Sbjct: 342 TRAANDFARRLNVLKDKDGNLSGEDVREGLTAVISLKVREPQFEGQTKTKLGNSEVRGIV 401
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
D V E LTEY E +P V +L K+L A +A AA++AR+L R+K+ L SSLPGKLAD
Sbjct: 402 DSIVTEGLTEYFEENPAVTKKVLDKALMASRAREAARKARELTRRKNALEVSSLPGKLAD 461
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
CS P++ EI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 462 CSVKDPDQCEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNVEKA 508
>gi|448329984|ref|ZP_21519278.1| DNA gyrase subunit B [Natrinema versiforme JCM 10478]
gi|445613172|gb|ELY66882.1| DNA gyrase subunit B [Natrinema versiforme JCM 10478]
Length = 643
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/460 (50%), Positives = 322/460 (70%), Gaps = 9/460 (1%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +I V++
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVSIHE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSVAD+GRGIP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVADDGRGIPVDTHEEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LE V R+G + + G+PV + V ++ + GT+IRFWPD +F T
Sbjct: 125 NALSERLEAKVKRNGAVFRHAFEAGEPVGDME-RVRDMEPDEETGTQIRFWPDTGIFETG 183
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKE--DSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
+ +T++ R+RELAFLN + I LR E D+D ++ Y + GG+ E+V++LN +
Sbjct: 184 -EISFSTLSNRLRELAFLNSGVRITLRDERVDTDDDEPVAETYEYDGGIREFVEYLNETR 242
Query: 315 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+H D++ F + I I++A+Q ++ ++ +AN+I T +GGTH+ G K +LTRT
Sbjct: 243 SAMHEDIIYFEDEEQNIQIEVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTRT 301
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N ++ + D D +LSGE +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ +
Sbjct: 302 VNDYANENDLLSDLDNNLSGEDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESA 361
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
+ E L Y E HPD +I+ K++ A KA +AAK+A +L R+KS L S+SLPGKLADC +
Sbjct: 362 MHEGLGTYFEEHPDTAQAIVMKAVEAAKARMAAKKAEELTRRKSALDSTSLPGKLADCQT 421
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
PEE+E+FI EGDSAGGSAKQ R+ FQ I+ P++ I
Sbjct: 422 KEPEEAELFIAEGDSAGGSAKQARNPEFQAIL-PIKGKIL 460
>gi|410672047|ref|YP_006924418.1| DNA gyrase subunit B [Methanolobus psychrophilus R15]
gi|409171175|gb|AFV25050.1| DNA gyrase subunit B [Methanolobus psychrophilus R15]
Length = 634
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/463 (50%), Positives = 324/463 (69%), Gaps = 13/463 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRP+MYIGS RGLHHLVYE++DN++DEA AG+ + I+V +
Sbjct: 7 YDASNIQVLEGLEAVRKRPSMYIGSVDGRGLHHLVYEVVDNSIDEALAGFCTEIDVTINE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
+ +V+V DNGRGIP+ P NKSALE V+T+LHAGGKF S+ Y VSGGLHGVG+SVV
Sbjct: 67 EGTVTVQDNGRGIPVGNLPKYNKSALEVVMTILHAGGKFDKST--YKVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LE V RDG Y+Q+Y RGKP ++ + + GT+I F PD +F T
Sbjct: 125 NALSEWLEAEVKRDGKLYYQRYERGKP----HDDIMEIGESEGTGTKITFKPDPLIFETT 180
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+F ++T+ R+RELAFLN + I++ D E+ Q + + GG+ +V++LN +
Sbjct: 181 -KFVYDTLVTRLRELAFLNKGIKISI--SDLRIEQPQQEVFQYEGGIVSFVKYLNHSRNV 237
Query: 317 LHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LH+ + F ++ +G +++A+Q+ +D+Y++ + +AN+I T +GGTH+ G KA+LTR N
Sbjct: 238 LHESPIYFEREKEGTVVEIAMQY-TDSYAEYVYSFANNINTHEGGTHLVGFKAALTRVAN 296
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+++K K +D LSGE +REGLT IISV++ P+FEGQTKT+LGN +V+ +V+ V
Sbjct: 297 DYIRQNKMAKGED-KLSGEDIREGLTAIISVKITEPQFEGQTKTKLGNSDVKGIVESMVS 355
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L+EY+E +P V ++IL K+L A +A AAK+AR+L R+K+ L S+LPGKLADCS
Sbjct: 356 EGLSEYMEENPKVANAILQKALDAQRAREAAKKARELTRRKNALDISTLPGKLADCSEKD 415
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P EI++VEGDSAGGSAKQGR+RRFQ I+ P + I A
Sbjct: 416 PSLCEIYLVEGDSAGGSAKQGRNRRFQAIL-PFRGKILNVEKA 457
>gi|297588052|ref|ZP_06946696.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Finegoldia magna
ATCC 53516]
gi|297574741|gb|EFH93461.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Finegoldia magna
ATCC 53516]
Length = 638
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/467 (50%), Positives = 324/467 (69%), Gaps = 15/467 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y ++QI VLEGLE VR RP MYIGST +GLHHLVYE++DN++DEA AG I+V
Sbjct: 4 NREYTADQITVLEGLEPVRVRPGMYIGSTDEKGLHHLVYEVVDNSIDEALAGVCDLIKVT 63
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNSV V D+G GIP++ HP T KS LETVLTVLHAGGKF S+ Y SGGLHGVG+
Sbjct: 64 IKKDNSVIVEDDGSGIPVETHPKTGKSTLETVLTVLHAGGKF--SNDAYQYSGGLHGVGV 121
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
S VNALS L V RDG Y Q++ +GK VT LT V GT I F PD +F
Sbjct: 122 SCVNALSTYLIARVKRDGKMYEQRFEKGKTVTELTVIKENVRG---TGTTIEFMPDNTIF 178
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNT 312
T + FD N +A R RE+AFLN + I E+ Y E F + GG++ +V+++N
Sbjct: 179 ET-LNFDKNVLAKRFREMAFLNKGVKIEFA-----DEREGYKELFHYEGGIKSFVEYINK 232
Query: 313 DKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
KKPL H+V+ + D +++A+Q+ +++Y++T++ + N+I+T+DGGTH+ G K++LT
Sbjct: 233 SKKPLDHEVMYIEGEKDTTKVEIAMQY-TESYNETIVSFTNNIKTVDGGTHVVGFKSALT 291
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R LN + +K+KD +LSG+ VREG+T ++SV++ NP+FEGQTK +LGN E R VVD
Sbjct: 292 RALNDYARNKNILKEKDDNLSGDDVREGITAVVSVKLNNPQFEGQTKGKLGNSEARTVVD 351
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E+L+ Y E +P ++ +I+ K+L++ KA LAA+RARDLVR+KSVL +++LPGKLADC
Sbjct: 352 SVVYEHLSFYFEENPKIVKTIIQKALASQKARLAARRARDLVRKKSVLDNTTLPGKLADC 411
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S+ E +EIF+VEGDSAGGSAK GRD +FQ I+ PL+ I A
Sbjct: 412 QSSDIEHNEIFLVEGDSAGGSAKGGRDNKFQAIL-PLRGKILNVEKA 457
>gi|152989756|ref|YP_001355478.1| DNA gyrase subunit B [Nitratiruptor sp. SB155-2]
gi|151421617|dbj|BAF69121.1| DNA gyrase subunit B [Nitratiruptor sp. SB155-2]
Length = 774
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/465 (48%), Positives = 314/465 (67%), Gaps = 13/465 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+E+I+VL+GLEAVRKRP MYIG T +GLHHL+YE++DNA+DEA AGY + I++
Sbjct: 3 KQQYGAEKIKVLKGLEAVRKRPGMYIGDTSVKGLHHLIYEVVDNAIDEAMAGYCNKIDIT 62
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
L D S ++DNGRGIP+D+HP A VLTVLHAGGKFGG S+ Y VSGGLHGVG+
Sbjct: 63 LTKDGSARISDNGRGIPVDIHPTEKIPAATVVLTVLHAGGKFGGDSA-YKVSGGLHGVGV 121
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ L +T+ RDG + Q++ RG P+T L + + GT I FWPD+++F
Sbjct: 122 SVVNALSKKLIMTIKRDGKIWRQEFERGIPITDLVA----IGETRQTGTTIEFWPDEEIF 177
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +F + ++ R +ELA+LNP +TI + D N Y F GGL ++V+ LNT
Sbjct: 178 ETT-EFKFDILSRRFKELAYLNPNITITFK----DERVNTKEVYHFEGGLRQFVEDLNT- 231
Query: 314 KKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
K+ L + F VD + +D+AL + S + + + + N+IRT +GGTH G +A LTR
Sbjct: 232 KEALTKTIYFHDKVDDVEVDIALLYNS-GFDEKVFSFVNNIRTPEGGTHESGFRAGLTRA 290
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+++ ++ K+K++ ++GE VREGL +ISV+VP P+FEGQTK +LG+ VR + +
Sbjct: 291 ISNYIAQNANAKEKNVKITGEDVREGLVAVISVKVPEPQFEGQTKGKLGSSYVRPITQKL 350
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
E LT+Y E +P +I++K+L+A + AAK+AR+LVR+K + +LPGKLADC S
Sbjct: 351 TYEKLTKYFEENPLDAKAIMNKALAAARGREAAKKARELVRRKDSMSVGTLPGKLADCQS 410
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE+F+VEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 411 KDPSISELFLVEGDSAGGSAKQGRDRVFQAIL-PLKGKILNVEKA 454
>gi|239624129|ref|ZP_04667160.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239520515|gb|EEQ60381.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 637
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/467 (50%), Positives = 321/467 (68%), Gaps = 11/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG++QIQ+LEGLEAVRKRP MYIGST RGLHHLVYEI+DNAVDEA AGY +IEV
Sbjct: 1 MGEQYGADQIQILEGLEAVRKRPGMYIGSTSARGLHHLVYEIVDNAVDEALAGYCDSIEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V D+GRGIP+ + A+E V T+LHAGGKFG + GY VSGGLHGVG
Sbjct: 61 TINEDNSITVVDDGRGIPVGIQKKAGLPAVEVVFTILHAGGKFG--NGGYKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
SVVNALSE LEV V++DG Y Q+Y RGK T ++ S D+ GT++ F PDK++
Sbjct: 119 ASVVNALSEWLEVQVYKDGDIYQQRYERGK--VTYPLKIVGKCSPDQHGTKVTFLPDKEI 176
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F I +D++T+ R+RE AFL L I L K+D D +K + + + GG++E+V +LN
Sbjct: 177 FEETI-YDYDTLKIRLRETAFLTKNLRITL-KDDRDEKKEK--TFHYEGGIKEFVTYLNK 232
Query: 313 DKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
K PL+D V+ +G+ +++++Q +D+Y++ + + N+I T +GGTH+ G K +LT
Sbjct: 233 GKTPLYDQVIYCEGSKEGVYVEVSMQH-NDSYTENIYTFVNNINTPEGGTHLTGFKNALT 291
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
+T N +K+K +KD + SLSGE +REGLT IIS++V P+FEGQTK +LGN E R VD
Sbjct: 292 KTFNDYARKNKLLKDNEDSLSGEDIREGLTAIISIKVEEPQFEGQTKQKLGNSEARSAVD 351
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E LT +LE +P + ++ KS+ A +A AA++ARDL R+KS L +LPGKLADC
Sbjct: 352 NIVSEQLTYFLEQNPAIAKAMCEKSIMAQRARAAARKARDLTRRKSALDGMALPGKLADC 411
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PE EI+IVEGDSAGGSAK R R Q I+ PL+ I A
Sbjct: 412 SDKNPENCEIYIVEGDSAGGSAKTARSRATQAIL-PLRGKILNVEKA 457
>gi|425737844|ref|ZP_18856114.1| DNA gyrase subunit B [Staphylococcus massiliensis S46]
gi|425480997|gb|EKU48159.1| DNA gyrase subunit B [Staphylococcus massiliensis S46]
Length = 639
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 241/470 (51%), Positives = 318/470 (67%), Gaps = 17/470 (3%)
Query: 68 FKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYA 127
K+N +++YG+ QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGYA
Sbjct: 1 MKDNNNTESYGAGQIQVLEGLEAVRKRPGMYIGSTSEKGLHHLVWEIVDNSIDEALAGYA 60
Query: 128 SNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGG 187
S I V + DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG S Y VSGG
Sbjct: 61 SEITVTIEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGDS--YKVSGG 118
Query: 188 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 247
LHGVG SVVNALSE LEV V+R+ YHQ Y +G P L + GT IRF
Sbjct: 119 LHGVGSSVVNALSEDLEVYVYRNETVYHQAYKKGVPQFDLK----EIGDTSLNGTTIRFK 174
Query: 248 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 307
D ++F + + T+ RIRELAFLN ++I L+ E + E+ + GG++ YV
Sbjct: 175 ADPEIFQETTTYQYETLQNRIRELAFLNKGISITLKDEREEEEREDNYY--YEGGIKSYV 232
Query: 308 QWLNTDKKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
LN +K PLH+ V R+DV+ +++ALQ+ + Y+ +L YAN+I T +GGTH
Sbjct: 233 DLLNENKDPLHESPIYVHEQREDVE---VEIALQY-NRGYATNLLTYANNIHTYEGGTHE 288
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
+G K +LTR LNS G+K++ +K+ L+GE REGLT I+S++ +P+FEGQTKT+LGN
Sbjct: 289 DGFKRALTRVLNSYGQKNRLLKEDKERLTGEDTREGLTAIVSIKHGDPQFEGQTKTKLGN 348
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
EVR++VD+ E +L +P V I+ K L A +A +AAK+AR++ R+KS L S+
Sbjct: 349 SEVRQIVDRVFSELFERFLMENPQVGKIIVEKGLMASRARIAAKKAREVTRRKSGLEVSN 408
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LPGKLADCSS P ESEIF+VEGDSAGGS K GRD R Q I+ PL+ I
Sbjct: 409 LPGKLADCSSKDPSESEIFLVEGDSAGGSTKLGRDSRTQAIL-PLRGKIL 457
>gi|398309108|ref|ZP_10512582.1| DNA gyrase subunit B [Bacillus mojavensis RO-H-1]
Length = 638
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/464 (50%), Positives = 316/464 (68%), Gaps = 11/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I + +
Sbjct: 7 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINILIE 66
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+ +H + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 67 KDNSITVIDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 124
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS L+VTV RDG + Q Y+RG PV+ L + D GT F PD ++FT
Sbjct: 125 VNALSTELDVTVHRDGKIHRQVYNRGIPVSDLEV----IGETDHTGTTTHFVPDPEIFTE 180
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
+++++ +A R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 181 TTEYEYDLLANRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 238
Query: 316 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+H+ + + DGIT+++ALQ+ +D Y+ + + N+I T +GGTH G K LTR +
Sbjct: 239 VVHEEPIYIEGEKDGITVEVALQY-NDGYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 297
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +K +K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 298 NDYARKKGLIKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 357
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
L ++ +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 358 SAALETFMLENPDAARKIVDKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 417
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 418 DPSISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 460
>gi|448414581|ref|ZP_21577650.1| DNA gyrase subunit B [Halosarcina pallida JCM 14848]
gi|445682147|gb|ELZ34571.1| DNA gyrase subunit B [Halosarcina pallida JCM 14848]
Length = 637
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/458 (51%), Positives = 320/458 (69%), Gaps = 11/458 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY I V +
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGYCDEISVTVND 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSV+DNGRGIP+D H ++ A+E ++TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVSDNGRGIPVDTHEQYDRPAVEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS+ LEV + RDG + ++ RG+P V ++ + GT IRF PD++VF T
Sbjct: 125 NALSKWLEVEIKRDGALWRHRFERGEPQADAFERVRDLEPDEDTGTTIRFKPDEEVFET- 183
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+ F+ +T+ R+RELAFLN + I+LR E D E + + F GG+ E+V++LN K
Sbjct: 184 LAFEFSTLENRLRELAFLNSGVEISLRDEPDDEESS----FRFEGGIREFVRYLNETKTT 239
Query: 317 LHDVVGFRKDVD-GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
+HD V + +D + GI +++A+Q + ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 240 MHDDVIYYEDTEEGIEVEVAMQ-ATQELQGSIHAFANNINTREGGTHMTGFKTALTRVIN 298
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+K+ + D D SL GE +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ +
Sbjct: 299 DYARKNNLLDDLD-SLKGEDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESVMH 357
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
+ L Y E +P SI+ K++ A KA AAK+A +L R+KS L S++LPGKLADC S
Sbjct: 358 QQLGTYFEENPGTAQSIVMKAVEAAKARRAAKKAEELTRRKSALESTALPGKLADCQSRD 417
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P ESE+F+VEGDSAGGSAKQGRDR FQ I+ PL+ I
Sbjct: 418 PAESELFVVEGDSAGGSAKQGRDRHFQAIL-PLKGKIL 454
>gi|374294499|ref|YP_005044690.1| DNA gyrase subunit B [Clostridium clariflavum DSM 19732]
gi|359823993|gb|AEV66766.1| DNA gyrase subunit B [Clostridium clariflavum DSM 19732]
Length = 641
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/457 (51%), Positives = 316/457 (69%), Gaps = 12/457 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V+ +Y IQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AGY IE+
Sbjct: 7 VNNSYDESNIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIMDNSIDEALAGYCDEIEI 66
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++ DNGRGIP+ +HP +E V T+LHAGGKFGG GYSVSGGLHGVG
Sbjct: 67 TINPDNSITNIDNGRGIPVGIHPKMGIPTVEVVHTILHAGGKFGGE--GYSVSGGLHGVG 124
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
SVVNALSE LEV V+R+G Y Q+Y RGK V+ L + DR GT+ F PD +
Sbjct: 125 ASVVNALSEYLEVEVYREGNIYRQRYERGKVVSKLEV----IGKTDRTGTKTTFKPDPLI 180
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F I+FD+ T+ R RELAFLN LTI L D E+ E + GG+ +V+ LN
Sbjct: 181 FE-KIEFDYETLLNRFRELAFLNKGLTIRLI--DKRKEEPVVKELHYEGGIISFVEHLNR 237
Query: 313 DKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K+ +H + F DG +++A+Q+ +D Y++ + +AN+I T +GGTH+ G K ++T
Sbjct: 238 NKEVIHQPPIYFESLKDGNHVEIAMQY-NDTYNENIYSFANNIATTEGGTHLTGFKTAIT 296
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
+ N +K +K+ D +L GE VREGLT +ISV++ P+FEGQTKT+LGN E+R +V+
Sbjct: 297 KVFNDYCRKYNYLKENDKNLLGEDVREGLTAVISVKLHEPQFEGQTKTKLGNSEIRSLVE 356
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+V E L+ +LE +P + +I+ KS++A +A AA++AR++ R+KS L S++LPGKLADC
Sbjct: 357 NAVSEKLSAFLEENPSIAKAIVEKSITAARAREAARKAREMTRRKSALESTTLPGKLADC 416
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPL 528
S P EI+IVEGDSAGGSAKQGRDRRFQ I+ PL
Sbjct: 417 SEKDPSLCEIYIVEGDSAGGSAKQGRDRRFQAIL-PL 452
>gi|334127015|ref|ZP_08500951.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Centipeda
periodontii DSM 2778]
gi|333390317|gb|EGK61457.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Centipeda
periodontii DSM 2778]
Length = 684
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 243/467 (52%), Positives = 320/467 (68%), Gaps = 13/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLVYE++DN++DEA AGY N+EV
Sbjct: 53 VDADYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVYEVVDNSIDEALAGYCDNVEV 112
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V DNGRGIP+D+H + A+E VLTVLHAGGKFGG GY VSGGLHGVG
Sbjct: 113 VIHRDNSITVTDNGRGIPVDMHE-SGMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVG 169
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS ++V V RDG + ++RG VT H + + + GTR+ F PD ++
Sbjct: 170 VSVVNALSSEMDVEVRRDGKIHAISFARG--VTVEKLH--EIGTSETTGTRVHFVPDPEI 225
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FT + T+ R+RELAFLN +TI L D E+ + + F GG+ +V LN
Sbjct: 226 FTVT-TYSFETLKHRLRELAFLNHGITITLV--DERGEEERRETFHFDGGIRSFVSHLNR 282
Query: 313 DKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
K+ +++ + F D +++A+Q+ +D+Y + + + N+I T +GGTH+ G K +LT
Sbjct: 283 KKETINEEPIYFNGVKDDTVVEIAMQY-NDSYQENIYSFVNNINTEEGGTHLAGFKIALT 341
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R N ++ +KDKD +LSGE VREGLTC+IS++V P+FEGQTKT+LGN EVR +VD
Sbjct: 342 RAANDFARRLNVLKDKDGNLSGEDVREGLTCVISLKVREPQFEGQTKTKLGNSEVRGIVD 401
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E LTEY E +P V +L K+L A +A AA++AR+L R+K+ L SSLPGKLADC
Sbjct: 402 SIVTEGLTEYFEENPTVTKKVLDKALMASRAREAARKARELTRRKNALEVSSLPGKLADC 461
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P++ EI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 462 SVKDPDQCEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNVEKA 507
>gi|296330042|ref|ZP_06872526.1| DNA gyrase subunit B [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305672704|ref|YP_003864375.1| DNA gyrase subunit B [Bacillus subtilis subsp. spizizenii str. W23]
gi|296153081|gb|EFG93946.1| DNA gyrase subunit B [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305410947|gb|ADM36065.1| DNA gyrase subunit B [Bacillus subtilis subsp. spizizenii str. W23]
Length = 638
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 235/464 (50%), Positives = 314/464 (67%), Gaps = 11/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I + +
Sbjct: 7 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIQIE 66
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+ +H + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 67 KDNSITVIDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 124
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS L VTV RDG + Q Y RG PV+ L + D GT F PD ++FT
Sbjct: 125 VNALSTELVVTVHRDGKIHRQTYKRGVPVSDLEI----IGETDHTGTTTHFVPDPEIFTE 180
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
+D++ +A R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 181 TTVYDYDLLANRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 238
Query: 316 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+H+ + + DGIT+++ALQ+ +D+Y+ + + N+I T +GGTH G K LTR +
Sbjct: 239 VVHEEPIYIEGEKDGITVEVALQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 297
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +K +K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 298 NDYARKKGLIKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 357
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
L ++ +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 358 SAALETFMLENPDAAKKIVDKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 417
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 418 DPSISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 460
>gi|448311928|ref|ZP_21501681.1| DNA gyrase subunit B [Natronolimnobius innermongolicus JCM 12255]
gi|445603549|gb|ELY57511.1| DNA gyrase subunit B [Natronolimnobius innermongolicus JCM 12255]
Length = 643
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/460 (50%), Positives = 320/460 (69%), Gaps = 9/460 (1%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY +I V +
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGYCDDITVTIHE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D+SVSVAD+GRGIP+D H + ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DDSVSVADDGRGIPVDTHDEYERPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LE V RDG + + G+PV + V +++ + GT++RFWPD +F T
Sbjct: 125 NALSERLEAEVKRDGSVHRHAFEGGEPVGDMQ-EVREMNADEETGTQVRFWPDTSIFETE 183
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALR--KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
F +T++ R+RELAFLN + I LR +E++D + Y + GG+ E+V++LN +
Sbjct: 184 -GFSFSTLSNRLRELAFLNSGVRITLRDEREETDDGDVVEDTYEYEGGIREFVKYLNETR 242
Query: 315 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+HD V+ F + I I++A+Q ++ ++ +AN+I T +GGTH+ G K +LTRT
Sbjct: 243 SAMHDDVIYFEDEAQNIQIEVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTRT 301
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N K + + D + +L GE +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ +
Sbjct: 302 VNDYAKDNDMLGDLETNLKGEDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESA 361
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
+ E L Y E HPD +I++K++ A KA AA++A +L R+KS L S+SLPGKLADC +
Sbjct: 362 MHEGLGTYFEEHPDTAQAIVTKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQT 421
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
PE +E+FI EGDSAGGSAKQ RD FQ ++ P++ I
Sbjct: 422 KDPETAELFIAEGDSAGGSAKQARDPEFQAVL-PIKGKIL 460
>gi|28896290|ref|NP_802640.1| DNA gyrase subunit B [Streptococcus pyogenes SSI-1]
gi|161485752|ref|NP_664280.2| DNA gyrase subunit B [Streptococcus pyogenes MGAS315]
gi|342164970|sp|P0DG04.1|GYRB_STRP3 RecName: Full=DNA gyrase subunit B
gi|342164971|sp|P0DG05.1|GYRB_STRPQ RecName: Full=DNA gyrase subunit B
gi|28811541|dbj|BAC64473.1| putative DNA gyrase B subunit [Streptococcus pyogenes SSI-1]
Length = 650
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/465 (49%), Positives = 328/465 (70%), Gaps = 11/465 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA AG+AS+I+V +
Sbjct: 13 QEYDASQIQVLEGLEAVRMRPGMYIGSTAKEGLHHLVWEIVDNSIDEALAGFASHIKVFI 72
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
ADNS++V D+GRGIP+D+ T + A+ETV TVLHAGGKFGG S Y VSGGLHGVG S
Sbjct: 73 EADNSITVVDDGRGIPVDIQVKTGRPAVETVFTVLHAGGKFGGGS--YKVSGGLHGVGSS 130
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS L+V V+++G ++Q++ RG V L + + D GT + F PD ++FT
Sbjct: 131 VVNALSTQLDVRVYKNGQIHYQEFKRGAVVADLEV----IGTTDVTGTTVHFTPDPEIFT 186
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
QFD++ +A RI+ELAFLN L I++ + S E+ ++ + + GG+ YV++LN K
Sbjct: 187 ETTQFDYSVLAKRIQELAFLNRGLKISITDKRSGMEQEEH--FHYEGGIGSYVEFLNDKK 244
Query: 315 KPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+ + + +++GI +++A+Q+ + +Y +T++ +AN+I T +GGTH +G +A+LTR
Sbjct: 245 DVIFETPIYTDGELEGIAVEVAMQYTT-SYQETVMSFANNIHTHEGGTHEQGFRAALTRV 303
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N KK+K +K+ + +L+GE VREGLT +ISV+ PNP+FEGQTKT+LGN EV K+ ++
Sbjct: 304 INDYAKKNKILKENEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVVKITNRL 363
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
E +L +P V I+ K + A KA +AAKRAR++ R+KS L S+LPGKLADCSS
Sbjct: 364 FSEAFQRFLLENPQVARKIVEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLADCSS 423
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
++E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 424 NDANQNELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 467
>gi|282855958|ref|ZP_06265249.1| DNA gyrase, B subunit [Pyramidobacter piscolens W5455]
gi|282586177|gb|EFB91454.1| DNA gyrase, B subunit [Pyramidobacter piscolens W5455]
Length = 632
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/467 (49%), Positives = 318/467 (68%), Gaps = 15/467 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+S Y +E IQ+LEGL+ VRKRP MYIG T RGLHH VYE++DN+VDEA G+ S I V
Sbjct: 1 MSTQYTAEDIQILEGLDPVRKRPGMYIGDTTTRGLHHCVYEVVDNSVDEALGGFCSEITV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L AD SVSV+DNGRGIP+D HP+ + ALE VLTVLHAGGKF + Y +SGGLHGVG
Sbjct: 61 TLHADQSVSVSDNGRGIPVDPHPSNGRPALEVVLTVLHAGGKF--DNHNYKISGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE LEVTV+RDG E+H+++ RG PV+ LT ++GT + F PD ++
Sbjct: 119 VSVVNALSEWLEVTVYRDGREWHERFERGTPVSGLTGGT----PTAKRGTTVTFRPDAEI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F + F T+ R RE+AFL P L D + + Y + GG+ E+V ++N
Sbjct: 175 F-DEVAFSAETLGNRFREMAFLIPGLKFIF----VDEAEGKTWTYHYEGGVSEFVAYINK 229
Query: 313 DKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
K+ L + R + DG+ ++ Q+ +D Y + + +AN I TI+GGTH+ G++++LT
Sbjct: 230 GKQTLTPRPIVIRGEKDGVAVEAGFQY-TDEYIERLYSFANLINTIEGGTHVAGLRSALT 288
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R +N +++ +K+KD +LSG+ +REGLTC++SV++ NP+FEGQTKT+LGN V+ +VD
Sbjct: 289 RGINEGARRAGVLKEKDENLSGDDLREGLTCVLSVKLGNPQFEGQTKTKLGNGNVKGIVD 348
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+ + + + LE P V+ I+ K++ A +A AAK+AR+LVR KS L SLPGKLADC
Sbjct: 349 SLLYDGILQALEEDPSVIKPIIEKAIKARQAREAAKKARELVR-KSALSGLSLPGKLADC 407
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SS T E E++IVEGDSAGGSAKQGRDR+FQ I+ PL+ I A
Sbjct: 408 SSRTAENCEVYIVEGDSAGGSAKQGRDRKFQAIL-PLRGKILNVEKA 453
>gi|448346437|ref|ZP_21535322.1| DNA gyrase subunit B [Natrinema altunense JCM 12890]
gi|445632640|gb|ELY85851.1| DNA gyrase subunit B [Natrinema altunense JCM 12890]
Length = 642
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/460 (50%), Positives = 321/460 (69%), Gaps = 10/460 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +I V++
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVSIHE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSVAD+GRGIP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVADDGRGIPVDTHEEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LE V RDG+ + + G+PV + V ++ + GT IRFWPD +F T
Sbjct: 125 NALSERLEAEVKRDGV-FRHAFEAGEPVGDME-RVRDMEPDEETGTEIRFWPDTDIFETG 182
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALR--KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
+ +T++ R+RELAFLN + I LR +E++D + Y + GG+ E+V +LN +
Sbjct: 183 -EISFSTLSNRLRELAFLNSGVRITLRDEREETDEGETVAETYEYDGGIREFVDYLNETR 241
Query: 315 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+HD V+ F + I +++A+Q ++ ++ +AN+I T +GGTH+ G K +LTR
Sbjct: 242 SAMHDDVIYFEDEAQNIQVEVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTRC 300
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N ++ + D D +L GE +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ +
Sbjct: 301 VNDYANENDLLSDLDNNLKGEDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESA 360
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
+ E L Y E HPD ++I++K++ A KA +AA++A +L R+KS L S+SLPGKLADC +
Sbjct: 361 MHEGLGTYFEEHPDTAEAIVAKAVEAAKARMAAQKAEELTRRKSALESTSLPGKLADCQT 420
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P+E+E+FI EGDSAGGSAKQ R+ FQ I+ P++ I
Sbjct: 421 KDPDEAELFIAEGDSAGGSAKQARNPDFQAIL-PIKGKIL 459
>gi|169823702|ref|YP_001691313.1| DNA gyrase B subunit [Finegoldia magna ATCC 29328]
gi|167830507|dbj|BAG07423.1| DNA gyrase B subunit [Finegoldia magna ATCC 29328]
Length = 638
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 240/468 (51%), Positives = 329/468 (70%), Gaps = 17/468 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y ++QI VLEGLE VR RP MYIGST +GLHHLVYE++DN++DEA AG I+V
Sbjct: 4 NREYTADQITVLEGLEPVRVRPGMYIGSTDEKGLHHLVYEVVDNSIDEALAGVCDLIKVT 63
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS+ V D+G GIP++ HP T KS LETVLTVLHAGGKF S+ Y SGGLHGVG+
Sbjct: 64 IKKDNSIIVEDDGSGIPVETHPKTGKSTLETVLTVLHAGGKF--SNDAYQYSGGLHGVGV 121
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDR-QGTRIRFWPDKQV 252
S VNALS L V RDG Y Q++ +GK VT LT V R GT I F PD +
Sbjct: 122 SCVNALSTYLIARVKRDGKMYEQRFEKGKTVTGLTV----VKENVRGTGTTIEFMPDDTI 177
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLN 311
F T + FD N +A R RE+AFLN + I E SD E++ Y E F + GG++ +V+++N
Sbjct: 178 FET-LNFDKNVLAKRFREMAFLNKGVKI----EFSD-ERDGYKELFHYEGGIKSFVEYIN 231
Query: 312 TDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 370
KKPL H+V+ + D +++A+Q+ +++Y++T++ + N+I+T+DGGTH+ G K++L
Sbjct: 232 KSKKPLDHEVMYIEGEKDTTKVEIAMQY-TESYNETIVSFTNNIKTVDGGTHVVGFKSAL 290
Query: 371 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
TR LN + +K+KD +LSG+ VREG+T ++SV++ NP+FEGQTK +LGN E R VV
Sbjct: 291 TRALNDYARNKNILKEKDDNLSGDDVREGITAVVSVKLNNPQFEGQTKGKLGNSEARTVV 350
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
D V E+L+ Y E +P ++ +I+ K+L++ KA LAA+RARDLVR+KSVL +++LPGKLAD
Sbjct: 351 DSVVYEHLSFYFEENPKIVRTIIQKALASQKARLAARRARDLVRKKSVLDNTTLPGKLAD 410
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
C S+ E +EIF+VEGDSAGGSAK GRD +FQ I+ PL+ I A
Sbjct: 411 CQSSDIEYNEIFLVEGDSAGGSAKGGRDNKFQAIL-PLRGKILNVEKA 457
>gi|220927465|ref|YP_002504374.1| DNA gyrase subunit beta [Clostridium cellulolyticum H10]
gi|219997793|gb|ACL74394.1| DNA gyrase, B subunit [Clostridium cellulolyticum H10]
Length = 642
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 240/453 (52%), Positives = 316/453 (69%), Gaps = 12/453 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+ N++DEA AG I+V +
Sbjct: 10 YDESQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVANSIDEALAGRCDIIKVIVHK 69
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNSV+V DNG GIP+ +HP LE V T+LHAGGKFG S YSVSGGLHGVG SVV
Sbjct: 70 DNSVTVTDNGSGIPVGIHPKMGIPTLEVVHTILHAGGKFG--SGAYSVSGGLHGVGASVV 127
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSES+EV V R+G Y QKYSRGKP+T++ V D GT F PD ++F
Sbjct: 128 NALSESMEVEVKREGHIYRQKYSRGKPLTSVDI----VGDTDETGTITTFKPDPEIFE-E 182
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
I +D + + R RE+AFLN + I L D PE++ + GG+ +V++LN K+P
Sbjct: 183 IVYDFDAMISRYREMAFLNKGINIKLI--DERPEESVEKNLHYEGGIISFVEYLNKSKEP 240
Query: 317 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LHD V+ D +++A+Q+ +D+Y++++ YAN+I T +GGTH+ G +A++T+ LN
Sbjct: 241 LHDEVIYLEGSRDANIVEVAMQY-NDSYNESVFTYANNIATTEGGTHLTGFRAAITKVLN 299
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+K +K+ D +LSGE VREGLT ++SV++P P+FEGQTKT+LGN E+R +V+ V
Sbjct: 300 DYARKFNILKENDKNLSGEDVREGLTAVLSVKLPEPQFEGQTKTKLGNSEIRTLVENVVS 359
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
+ L +LE HP V IL KS++A +A AA++AR+L R+KS + SS+LPGKLADCS
Sbjct: 360 DKLFIFLEEHPAVAKIILDKSITAARAREAARKARELTRRKSAMDSSTLPGKLADCSEKD 419
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPL 528
P ++EIFIVEGDSAGGSAKQGRDR+ Q I+ PL
Sbjct: 420 PTKTEIFIVEGDSAGGSAKQGRDRKIQAIL-PL 451
>gi|72160412|ref|YP_288069.1| DNA gyrase subunit B [Thermobifida fusca YX]
gi|71914144|gb|AAZ54046.1| DNA gyrase subunit B [Thermobifida fusca YX]
Length = 661
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/465 (50%), Positives = 322/465 (69%), Gaps = 12/465 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + I VLEGLEAVRKRP MYIGSTG RGLHHLV E++DN+VDEA AGYA+ IEV LLA
Sbjct: 19 YDARSITVLEGLEAVRKRPGMYIGSTGERGLHHLVQEVVDNSVDEALAGYATAIEVTLLA 78
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D V V DNGRGIP+D HP K A+E VLT LHAGGKF S Y+VSGGLHGVG+SVV
Sbjct: 79 DGGVRVTDNGRGIPVDPHPVEKKPAVELVLTTLHAGGKF--DSKSYAVSGGLHGVGVSVV 136
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS LEV V RDG + Q Y KPVT L + + D GT+I FWPD +F T
Sbjct: 137 NALSTRLEVEVRRDGYLWTQSYEMTKPVTEL----IRREPTDETGTQITFWPDGSIFETT 192
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSD--PEKNQYNEYFFAGGLEEYVQWLNTDK 314
F+ T++ R++E+AFLN L+I +R E + + Y++ GGL ++V+ LN K
Sbjct: 193 T-FNFETLSRRLQEMAFLNKGLSITIRDERPEFVGDSPVTQTYYYEGGLSDFVRHLNATK 251
Query: 315 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+P+H ++ F + DGI +++A+QW + +Y+ ++ +AN+I T +GGTH EG +A+LT
Sbjct: 252 EPVHSSIIAFEEAGDGIAVEIAMQW-NQSYTSSVHTFANTINTAEGGTHEEGFRAALTSI 310
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N + K ++DKD +L+G+ +REGLT I+SV++ +P+FEGQTKT+LGN E + V +
Sbjct: 311 VNRYARDQKLLRDKDENLTGDDIREGLTAIVSVKLADPQFEGQTKTKLGNTEAKSFVQKV 370
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
EYL ++L+ +P I++K+ A +A +AA++AR+L R+K++L S+SLPGKLADC S
Sbjct: 371 CHEYLRDWLDRNPGEAKDIVTKATQAARARIAARQARELTRRKTLLESTSLPGKLADCQS 430
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
T PE E++IVEGDSAGGSAK GRD +Q I+ P++ I A
Sbjct: 431 TDPERCEVYIVEGDSAGGSAKGGRDPYYQAIL-PIRGKILNVEKA 474
>gi|222479425|ref|YP_002565662.1| DNA gyrase B subunit [Halorubrum lacusprofundi ATCC 49239]
gi|222452327|gb|ACM56592.1| DNA gyrase, B subunit [Halorubrum lacusprofundi ATCC 49239]
Length = 645
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/462 (50%), Positives = 323/462 (69%), Gaps = 11/462 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGL+AVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY +I V +
Sbjct: 7 YGAGQIQVLEGLQAVRKRPAMYIGSTDGRGLHHLVYEVVDNSIDEALAGYCDDITVTIHD 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNSVSV+D+GRGIP+D+H ++ ALE ++T+LHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DNSVSVSDDGRGIPVDIHEKYDRPALEVIMTILHAGGKF--DSKSYQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TT 255
NALSE LEV V RDG Y +++RG+P V ++ + GT IRFWPD+++F TT
Sbjct: 125 NALSERLEVEVKRDGGVYRHEFARGEPAEDGFERVRDLNDDEETGTYIRFWPDEEIFETT 184
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
A +F +T+A R+RELAFLN + + L R E+ + + + GG+ E+V +LN
Sbjct: 185 AFEF--STLASRLRELAFLNSGVAVTLIDERDEEGVDDAGDEETFRYEGGIREFVGYLNE 242
Query: 313 DKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+ P+HD V+ F + D I +++A+Q ++ ++ +AN+I T +GGTH+ G K +LT
Sbjct: 243 ARTPIHDEVIYFEDEDDDIHVEVAMQ-ATEELQGSVHAFANNINTREGGTHLTGFKTALT 301
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RT+N V D + +L GE VREGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 302 RTVNDYANTHGLVDDLEANLKGEDVREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVE 361
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+ + L + E +PD ++ K+ A +A AAK+A +L R+KS L S++LPGKLADC
Sbjct: 362 SATHDKLGTFFEENPDTARKVVHKAAEAARARKAAKKAEELTRRKSALESTALPGKLADC 421
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
+ PEE+E+F+VEGDSAGGSAKQGR+R+ Q I+ PL+ I
Sbjct: 422 QTRDPEEAELFVVEGDSAGGSAKQGRNRKNQAIL-PLKGKIL 462
>gi|448529152|ref|ZP_21620411.1| DNA gyrase subunit B [Halorubrum hochstenium ATCC 700873]
gi|445709585|gb|ELZ61411.1| DNA gyrase subunit B [Halorubrum hochstenium ATCC 700873]
Length = 638
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 235/458 (51%), Positives = 316/458 (68%), Gaps = 10/458 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGL+AVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY IEV +
Sbjct: 7 YGAGQIQVLEGLQAVRKRPAMYIGSTDGRGLHHLVYEVVDNSIDEALAGYCEEIEVRVHD 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSV D+GRGIP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVRDDGRGIPVDTHEEYDRPALEVILTVLHAGGKF--DSKSYQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LEV V RDG Y ++ RG+P V +D+ + GT IRFWPD ++F T
Sbjct: 125 NALSERLEVEVKRDGGVYRHEFERGEPGEDAFERVRDMDADESTGTEIRFWPDDEIFETT 184
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
F +T+A R+RELAFLN + I L + D + + + GG+ E+V +LN + P
Sbjct: 185 -DFQTSTLANRLRELAFLNSGVEIRLVDDRDDTAET----FKYDGGIREFVAYLNETRSP 239
Query: 317 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
+H+ V+ F + DG+ +++A+Q ++ ++ +AN+I T +GGTH+ G K +LTRT+N
Sbjct: 240 IHEEVIYFEDETDGVHVEVAMQ-ATEELQGSVHAFANNINTREGGTHLTGFKTALTRTVN 298
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+ V D D +L GE VREGLT ++SV+ P+P+FEGQTKT+LGN EVR VV+ +
Sbjct: 299 DYANEHGLVDDLDANLKGEDVREGLTAVVSVKHPDPQFEGQTKTKLGNSEVRGVVESATH 358
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L + E +PD + ++ K+ A +A AAK+A +L R+KS L S++LPGKLADC +
Sbjct: 359 EKLGTFFEENPDTAEKVVHKAAEAARARKAAKKAEELTRRKSALESTALPGKLADCQTRD 418
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P E+E+F+VEGDSAGGSAKQGR+R Q I+ PL+ I
Sbjct: 419 PTEAELFVVEGDSAGGSAKQGRNRENQAIL-PLKGKIL 455
>gi|158319065|ref|YP_001511572.1| DNA gyrase subunit B [Alkaliphilus oremlandii OhILAs]
gi|158139264|gb|ABW17576.1| DNA gyrase, B subunit [Alkaliphilus oremlandii OhILAs]
Length = 636
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/466 (51%), Positives = 317/466 (68%), Gaps = 12/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y +EQIQVLEGL+ VRKRP MYIG+TGPRGLHHLVYE++DN++DEA GY I V
Sbjct: 6 TQEYSAEQIQVLEGLDPVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALGGYCDTILVT 65
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ D+S+ V DNGRGIP+D+HP T KS LETVLTVLHAGGKFGG S LHGVG+
Sbjct: 66 IKEDDSIEVIDNGRGIPVDVHPQTGKSTLETVLTVLHAGGKFGGGGYKVSGG--LHGVGV 123
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE LE T+ DG Y Q++ RG PV + + +GT I F PD ++F
Sbjct: 124 SVVNALSEYLEATIKLDGKVYWQRFERGNPVEDIKI----IGETKEKGTTILFKPDAEIF 179
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
+ F + T+ R+RELAFLN + I L D K Q +++ GG+ EYV++LN +
Sbjct: 180 EETV-FQYETLEYRLRELAFLNKGIKIVLI--DKREGKEQEKVFYYDGGIMEYVKYLNKN 236
Query: 314 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K LH+ ++ F K+ + +++A+Q+ +D Y++ + YAN+I T +GGTH+ G +ASLTR
Sbjct: 237 KSVLHEKIIHFEKEKETSVVEVAMQY-TDTYTENIFSYANNINTHEGGTHLSGFRASLTR 295
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N KK+ +K+KD + GE +REGLT +ISV++ P+FEGQTKT+LGN E+R +V+
Sbjct: 296 IVNDYAKKAGFLKEKDANFLGEDIREGLTAVISVKLTEPQFEGQTKTKLGNSEMRGIVEN 355
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
SV E L +LE +P I+ KSL A +A AAK+AR+L R+K L S +LPGKLADCS
Sbjct: 356 SVSEALEAFLEENPSDAKIIVEKSLRAQRAREAAKKARELTRRKGALESMALPGKLADCS 415
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SEI+IVEG+SAGGSAKQGRDR Q I+ PL+ I A
Sbjct: 416 EKDPALSEIYIVEGNSAGGSAKQGRDRSIQAIL-PLRGKILNVEKA 460
>gi|303234457|ref|ZP_07321095.1| DNA gyrase, B subunit [Finegoldia magna BVS033A4]
gi|302494412|gb|EFL54180.1| DNA gyrase, B subunit [Finegoldia magna BVS033A4]
Length = 638
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/468 (50%), Positives = 326/468 (69%), Gaps = 17/468 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y ++QI VLEGLE VR RP MYIGST +GLHHLVYE++DN++DEA AG I+V
Sbjct: 4 NREYTADQITVLEGLEPVRVRPGMYIGSTDEKGLHHLVYEVVDNSIDEALAGVCDLIKVT 63
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS+ V D+G GIP++ HP T KS LETVLTVLHAGGKF S+ Y SGGLHGVG+
Sbjct: 64 IKKDNSIIVEDDGSGIPVETHPKTGKSTLETVLTVLHAGGKF--SNDAYQYSGGLHGVGV 121
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDR-QGTRIRFWPDKQV 252
S VNALS L V RDG Y Q++ +GK VT LT V R GT I F PD +
Sbjct: 122 SCVNALSTYLIARVKRDGKMYEQRFEKGKTVTGLTV----VKENVRGTGTTIEFMPDDTI 177
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLN 311
F T + FD N +A R RE+AFLN + I E++ Y E F + GG++ +V+++N
Sbjct: 178 FET-LNFDRNVLAKRFREMAFLNKGVKIEFA-----DERDGYKELFHYEGGIKSFVEYIN 231
Query: 312 TDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 370
KKPL H+V+ + D +++A+Q+ +++Y++T++ + N+I+T+DGGTH+ G K++L
Sbjct: 232 KSKKPLDHEVMYIEGEKDTTKVEIAMQY-TESYNETIVSFTNNIKTVDGGTHVVGFKSAL 290
Query: 371 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
TR LN + +K+KD +LSG+ VREG+T ++SV++ NP+FEGQTK +LGN E R VV
Sbjct: 291 TRALNDYARNKNILKEKDDNLSGDDVREGITAVVSVKLNNPQFEGQTKGKLGNSEARTVV 350
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
D V E+L+ Y E +P ++ +I+ K+L++ KA LAA+RARDLVR+KSVL +++LPGKLAD
Sbjct: 351 DSVVYEHLSFYFEENPKIVRTIIQKALASQKARLAARRARDLVRKKSVLDNTTLPGKLAD 410
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
C S+ E +EIF+VEGDSAGGSAK GRD +FQ I+ PL+ I A
Sbjct: 411 CQSSDIEYNEIFLVEGDSAGGSAKGGRDNKFQAIL-PLRGKILNVEKA 457
>gi|385808591|ref|YP_005844987.1| DNA gyrase subunit B [Ignavibacterium album JCM 16511]
gi|383800639|gb|AFH47719.1| DNA gyrase subunit B [Ignavibacterium album JCM 16511]
Length = 665
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/470 (50%), Positives = 324/470 (68%), Gaps = 12/470 (2%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
+N S Y ++ I VL+GLEAVRKRPAMYIG G RGLHHL+ E++DN++DEA AG+
Sbjct: 3 KNNNSNEYSAKNINVLKGLEAVRKRPAMYIGDVGTRGLHHLINEVVDNSIDEALAGFNDR 62
Query: 130 IEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 189
+ V L D SVSV D GRGIP+D+HP KSALE V+TVLHAGGKF +S Y VSGGLH
Sbjct: 63 VIVTLHKDGSVSVEDRGRGIPVDIHPVEKKSALEVVMTVLHAGGKFDKNS--YKVSGGLH 120
Query: 190 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 249
GVG+SVVNALSE ++V V RD Y Q+Y RG PV + + D+ GT+I F PD
Sbjct: 121 GVGVSVVNALSEWMKVEVRRDNKIYFQEYRRGVPVEKVKE--IGTYKGDQTGTKITFMPD 178
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 309
K +F +F+ T+A R+RELA+LN +T+ L+ E+ E+ Y F GGL ++V++
Sbjct: 179 KTIFKVT-KFNFETVAERLRELAYLNKDVTMILKDENDGTEET----YRFKGGLIDFVKY 233
Query: 310 LNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
L+ ++P+H + + + +++A ++ S++YS+ + Y N+I TI+GGTH+ G + +
Sbjct: 234 LDEQREPIHKPIYIEGEKENTPVEIAFEY-SNSYSENVHSYVNNINTIEGGTHLVGFRTA 292
Query: 370 LTRTLNSLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTRT N+ K+ +K+ I+L+G+ REGLT ++SV+V P+FEGQTKT+LGN EV+
Sbjct: 293 LTRTFNNYAYKNGLIKENSKITLTGDDFREGLTAVVSVKVMEPQFEGQTKTKLGNSEVKS 352
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
VV+ V E L+EYLE +P V I+ KSL A +A AA++AR+LVR+K+ L S LPGKL
Sbjct: 353 VVETIVGEKLSEYLEQNPSVAKKIIEKSLKAAEAREAARKARELVRRKNALDSMHLPGKL 412
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
ADCS T PE EI+IVEGDSAGGSAKQGRDRRFQ I+ P++ I A
Sbjct: 413 ADCSITDPEHCEIYIVEGDSAGGSAKQGRDRRFQAIL-PIKGKILNVEKA 461
>gi|302340767|ref|YP_003805973.1| DNA gyrase subunit beta [Spirochaeta smaragdinae DSM 11293]
gi|301637952|gb|ADK83379.1| DNA gyrase, B subunit [Spirochaeta smaragdinae DSM 11293]
Length = 636
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 239/457 (52%), Positives = 316/457 (69%), Gaps = 12/457 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ +Y ++ IQVL+GL+AVRKRP MYIGSTGP GLHHLVYEI+DN++DEA AG+ I V
Sbjct: 1 MQNSYSAQNIQVLKGLDAVRKRPGMYIGSTGPEGLHHLVYEIVDNSIDEALAGFCDEILV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ N + V DNGRGIP DLH SALE V+T LHAGGKF + Y VSGGLHGVG
Sbjct: 61 VIEKGNIIRVEDNGRGIPTDLHKEEGVSALEIVMTKLHAGGKFNKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +V V RDG ++QKY RG P V V R GT RF PD ++
Sbjct: 119 VSVVNALSEWCDVFVHRDGSIFYQKYDRGNP----EKDVATVGETTRHGTITRFKPDGEI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F T ++F + ++ R+RELAFLN + I + ED + + E+ F GG++ +V +L+
Sbjct: 175 FET-VEFSFDVLSRRLRELAFLNKGIRIII--EDERLPQKKTKEFQFEGGVKSFVSFLSE 231
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
KKP+H + + F DGI ++ AL++ ++ YS+ + + N+I T +GGTH+ G K +LT
Sbjct: 232 SKKPIHKEPIYFEGIRDGIDLECALEY-NEGYSENIFSFVNNINTREGGTHLVGFKTALT 290
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RT N KKSK K D + SG+ VREGLT ++SV+VP+P+FEGQTK +LGN EVR VV+
Sbjct: 291 RTFNDFLKKSKFAKKMDETFSGDDVREGLTAVVSVKVPDPQFEGQTKAKLGNSEVRGVVE 350
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E+LT Y E +P +++ IL K A +A +AA++ARDL R+KS L SSSLPGKLADC
Sbjct: 351 SLVAEHLTYYFEENPKLIEKILEKITMAARARIAARKARDLTRRKSALESSSLPGKLADC 410
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPL 528
+ P +SE++IVEGDSAGGSAKQGRDR+FQ I+ PL
Sbjct: 411 AEKDPSKSEVYIVEGDSAGGSAKQGRDRQFQAIL-PL 446
>gi|169335585|ref|ZP_02862778.1| hypothetical protein ANASTE_02000 [Anaerofustis stercorihominis DSM
17244]
gi|169258323|gb|EDS72289.1| DNA gyrase, B subunit [Anaerofustis stercorihominis DSM 17244]
Length = 636
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/464 (50%), Positives = 326/464 (70%), Gaps = 12/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + +I+VLEGLEAVRKRP MYIGSTG +GLHHLVYEI+DN+VDEA AG+ NI V +
Sbjct: 7 NYDASKIKVLEGLEAVRKRPGMYIGSTGEKGLHHLVYEIVDNSVDEALAGFCKNIVVTIG 66
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
++++V D+GRGIP ++ KSA+E LT+LHAGGKF S Y VSGGLHGVG+SV
Sbjct: 67 EGDTITVEDDGRGIPTGMNEKYKKSAVEIALTMLHAGGKF--DSGTYKVSGGLHGVGVSV 124
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALSE L V V+++G Y QKY RGKP+T L V R GT + F PD ++F+
Sbjct: 125 VNALSEHLTVNVYQNGQVYEQKYERGKPITGLEV----VGKTKRTGTTVFFKPDGEIFSE 180
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
+ F+++T+ RIRELAFLN L I L+ D+ K+Q + + GG+ E+V + N K+
Sbjct: 181 LV-FNYDTLKHRIRELAFLNKGLNITLK--DTREGKDQEESFHYEGGIIEFVDYANRGKE 237
Query: 316 PLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
L +V+ F K+ D +++A+Q+ S +YS+++ +AN+I T++GG H+ G K +LTR++
Sbjct: 238 KLTPEVIYFEKESDVCMLEVAMQF-STSYSESIYSFANNINTVEGGMHVNGFKTALTRSI 296
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N+ +K +KD + +LSG+ +REGL +ISV++ +PEFEGQTKT+LGNPEVR VD +V
Sbjct: 297 NAYARKYNILKDNEENLSGDDIREGLCVVISVKLADPEFEGQTKTKLGNPEVRGYVDTTV 356
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
+ ++ YLE HP V I+ K+L+A +A AA++A+DLVR+KSVL S++LPGKLADC
Sbjct: 357 GDNISSYLEEHPPVAKIIVEKALTAQRARKAARKAKDLVRRKSVLESTALPGKLADCREK 416
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P + EI+IVEGDSAGGSAK GR+ + Q I+ PL+ I A
Sbjct: 417 DPSKCEIYIVEGDSAGGSAKLGRNSKTQAIL-PLRGKILNVEKA 459
>gi|19909729|dbj|BAB87060.1| DNA gyrase subunit B [Microcystis wesenbergii NIES-104]
Length = 381
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/386 (58%), Positives = 293/386 (75%), Gaps = 8/386 (2%)
Query: 108 HHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLT 167
HHLVYE++DN++DEA AGY ++IEV + AD SVSV D+GRGIP D+HP T KSALETVLT
Sbjct: 1 HHLVYEVVDNSIDEALAGYCTHIEVDIKADGSVSVTDDGRGIPTDVHPTTGKSALETVLT 60
Query: 168 VLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTL 227
+LHAGGKFG S GY VSGGLHGVG+SVVNALS ++VTVWRD + Q+Y RG PVT L
Sbjct: 61 ILHAGGKFG--SGGYKVSGGLHGVGISVVNALSAWVDVTVWRDHKVHTQRYERGIPVTEL 118
Query: 228 TCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDS 287
V D+ GTR+ F PD ++F+ I+FD++T++GR+RELA+LN + I D
Sbjct: 119 ---VSSPSEGDKTGTRVNFLPDTEIFSQGIEFDYSTLSGRLRELAYLNAGVKITF--SDY 173
Query: 288 DPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDT 346
PE+ Y + GG++EYV ++ +K+ LH D++ + +GI I++A QWC DAYSD
Sbjct: 174 RPEEPHIEIYCYEGGIKEYVAYMCREKETLHKDIIYVSGEKNGINIEVAFQWCIDAYSDN 233
Query: 347 MLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISV 406
+LG+AN+IRTIDGGTH+EG+KA LTRTLN++ +K +K+ + +L+GE+VREGLT +ISV
Sbjct: 234 ILGFANNIRTIDGGTHLEGLKAVLTRTLNNVARKRNKIKENEPNLAGENVREGLTAVISV 293
Query: 407 RVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAA 466
+VP PEFEGQTKT+LGN EVR +VD V E L EYLE +P V D+I+ K++ A KAA AA
Sbjct: 294 KVPEPEFEGQTKTKLGNTEVRGIVDSLVGETLNEYLEQNPQVADTIIEKAVQAYKAAEAA 353
Query: 467 KRARDLVRQKSVLRSSSLPGKLADCS 492
+RARDLVR+KSVL SS LPGKLADCS
Sbjct: 354 RRARDLVRRKSVLESSPLPGKLADCS 379
>gi|302380141|ref|ZP_07268614.1| DNA gyrase, B subunit [Finegoldia magna ACS-171-V-Col3]
gi|302312083|gb|EFK94091.1| DNA gyrase, B subunit [Finegoldia magna ACS-171-V-Col3]
Length = 638
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/468 (50%), Positives = 326/468 (69%), Gaps = 17/468 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y ++QI VLEGLE VR RP MYIGST +GLHHLVYE++DN++DEA AG I+V
Sbjct: 4 NREYTADQITVLEGLEPVRVRPGMYIGSTDEKGLHHLVYEVVDNSIDEALAGVCDLIKVT 63
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS+ V D+G GIP++ HP T KS LETVLTVLHAGGKF S+ Y SGGLHGVG+
Sbjct: 64 IKKDNSIIVEDDGSGIPVETHPKTGKSTLETVLTVLHAGGKF--SNDAYQYSGGLHGVGV 121
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDR-QGTRIRFWPDKQV 252
S VNALS L V RDG Y Q++ +GK VT LT V R GT I F PD +
Sbjct: 122 SCVNALSTYLIARVKRDGKMYEQRFEKGKTVTGLTV----VKENVRGTGTTIEFMPDDTI 177
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLN 311
F T + FD N +A R RE+AFLN + I E++ Y E F + GG++ +V+++N
Sbjct: 178 FET-LNFDRNVLAKRFREMAFLNKGVKIEFA-----DERDGYKELFHYEGGIKSFVEYIN 231
Query: 312 TDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 370
KKPL H+V+ + D +++A+Q+ +++Y++T++ + N+I+T+DGGTH+ G K++L
Sbjct: 232 KSKKPLDHEVMYIEGEKDTTKVEIAMQY-TESYNETIVSFTNNIKTVDGGTHVVGFKSAL 290
Query: 371 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
TR LN + +K+KD +LSG+ VREG+T ++SV++ NP+FEGQTK +LGN E R VV
Sbjct: 291 TRALNDYARNKSILKEKDDNLSGDDVREGITAVVSVKLNNPQFEGQTKGKLGNSEARTVV 350
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
D V E+L+ Y E +P ++ +I+ K+L++ KA LAA+RARDLVR+KSVL +++LPGKLAD
Sbjct: 351 DSVVYEHLSFYFEENPKIVRTIIQKALASQKARLAARRARDLVRKKSVLDNTTLPGKLAD 410
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
C S+ E +EIF+VEGDSAGGSAK GRD +FQ I+ PL+ I A
Sbjct: 411 CQSSDIEYNEIFLVEGDSAGGSAKGGRDNKFQAIL-PLRGKILNVEKA 457
>gi|448339329|ref|ZP_21528357.1| DNA gyrase subunit B [Natrinema pallidum DSM 3751]
gi|445620558|gb|ELY74054.1| DNA gyrase subunit B [Natrinema pallidum DSM 3751]
Length = 642
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/460 (49%), Positives = 322/460 (70%), Gaps = 10/460 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +I V++
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVSIHE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSVAD+GRGIP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVADDGRGIPVDTHEEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LE V RDG+ + + G+PV + V ++ + GT IRFWPD +F T
Sbjct: 125 NALSERLEAEVKRDGV-FRHAFEAGEPVGDME-RVRDMEPDEETGTEIRFWPDTDIFETG 182
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALR--KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
+ +T++ R+RELAFLN + I LR +E++D ++ Y + GG+ E+V +LN +
Sbjct: 183 -EISFSTLSNRLRELAFLNSGVRITLRDEREETDEGESVAETYEYDGGIREFVDYLNETR 241
Query: 315 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+HD ++ F + I +++A+Q ++ ++ +AN+I T +GGTH+ G K +LTR
Sbjct: 242 SAMHDDIIYFEDEAQNIQVEVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTRC 300
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N ++ + D D +L GE +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ +
Sbjct: 301 VNDYANENDLLSDLDNNLKGEDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESA 360
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
+ E L Y E HPD ++I++K++ A KA +AA++A +L R+KS L S+SLPGKLADC +
Sbjct: 361 MHEGLGTYFEEHPDTAEAIVAKAVEAAKARMAAQKAEELTRRKSALESTSLPGKLADCQT 420
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P+E+E+FI EGDSAGGSAKQ R+ FQ I+ P++ I
Sbjct: 421 KDPDEAELFIAEGDSAGGSAKQARNPDFQAIL-PIKGKIL 459
>gi|443631606|ref|ZP_21115787.1| DNA gyrase, B subunit [Bacillus subtilis subsp. inaquosorum KCTC
13429]
gi|443349411|gb|ELS63467.1| DNA gyrase, B subunit [Bacillus subtilis subsp. inaquosorum KCTC
13429]
Length = 638
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/464 (50%), Positives = 313/464 (67%), Gaps = 11/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I + +
Sbjct: 7 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIQIE 66
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+ + + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 67 KDNSITVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 124
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS L+VTV RDG + Q Y RG PV L + D GT F PD ++FT
Sbjct: 125 VNALSTELDVTVHRDGKIHRQTYKRGVPVADLEI----IGETDHTGTTTHFIPDPEIFTE 180
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
+D++ +A R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 181 TTVYDYDLLANRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 238
Query: 316 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+H+ + + DGIT+++ALQ+ +D+Y+ + + N+I T +GGTH G K LTR +
Sbjct: 239 VVHEEPIYIEGEKDGITVEVALQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 297
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +K +K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 298 NDYARKKGLIKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 357
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
+ ++ +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 358 SAAMETFMLENPDAAKKIVDKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 417
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 418 DPSISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 460
>gi|325299173|ref|YP_004259090.1| DNA gyrase subunit B [Bacteroides salanitronis DSM 18170]
gi|324318726|gb|ADY36617.1| DNA gyrase, B subunit [Bacteroides salanitronis DSM 18170]
Length = 654
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/466 (49%), Positives = 308/466 (66%), Gaps = 12/466 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
TY + IQVLEGLEAVRKRPAMYIG +GLHHLVYE++DN++DEA AGY ++IEV +
Sbjct: 12 TYSASSIQVLEGLEAVRKRPAMYIGDISEKGLHHLVYEVVDNSIDEALAGYCTHIEVTIN 71
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+D H KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 72 EDNSITVQDNGRGIPVDFHEKEKKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 129
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS + V+R+G Y Q+Y+ GKP+ V V + D GTR FWPD +FT
Sbjct: 130 VNALSTHMITNVFRNGKIYQQEYACGKPLYP----VKEVGTTDITGTRQTFWPDASIFTV 185
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTD 313
++ +N + R+RELA+LN +TI L + E Y + F G++E+V++LN+
Sbjct: 186 T-EYKYNILQARMRELAYLNKGITITLTDKREKEEDGSYKQEVFHSEEGVKEFVRFLNST 244
Query: 314 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
PL DV+ + G+ I+ A+ + + + + + Y N+I TI+GGTH G + +LTR
Sbjct: 245 NTPLIDDVIYLNTEKQGVPIECAIMY-NTGFRENLHSYVNNINTIEGGTHEAGFRTALTR 303
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
L + SK ++ + +SGE REGL +ISV+V P+FEGQTKT+LGN EV V+Q
Sbjct: 304 VLKKYAEDSKALEKAKVEISGEDFREGLIAVISVKVAEPQFEGQTKTKLGNNEVSGAVNQ 363
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+V E LT YLE HP I+ K + A A +AA++AR+ V++KS + LPGKLADCS
Sbjct: 364 AVGEALTYYLEEHPKEAKLIVDKVVLAATARIAARKARESVQRKSPMGGGGLPGKLADCS 423
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S TPEE E+F+VEGDSAGGSAKQGR R+FQ I+ PL+ I A
Sbjct: 424 SRTPEECELFLVEGDSAGGSAKQGRSRQFQAIL-PLRGKILNVEKA 468
>gi|326202777|ref|ZP_08192644.1| DNA gyrase, B subunit [Clostridium papyrosolvens DSM 2782]
gi|325986854|gb|EGD47683.1| DNA gyrase, B subunit [Clostridium papyrosolvens DSM 2782]
Length = 642
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/458 (52%), Positives = 319/458 (69%), Gaps = 16/458 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ +Y QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+ N+VDEA AG I+V
Sbjct: 7 TSSYDESQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVANSVDEALAGRCDTIQVI 66
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++V DNG GIP+ +HP LE V T+LHAGGKFG S YSVSGGLHGVG
Sbjct: 67 VHKDNSITVTDNGSGIPVGIHPKMGIPTLEVVHTILHAGGKFG--SGAYSVSGGLHGVGA 124
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSES+EV V R+G Y QKYSRGKP+T++ + + GT F PD +F
Sbjct: 125 SVVNALSESMEVEVKREGHIYRQKYSRGKPITSVEI----IGETEDSGTITTFKPDPDIF 180
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIAL--RKEDSDPEKNQYNEYFFAGGLEEYVQWLN 311
I FD + + R RE+AFLN + I L ++ D EKN + + GG+ +V++LN
Sbjct: 181 ED-IVFDFDVMITRYREMAFLNRGIKIQLIDQRPDEIIEKNLH----YEGGIISFVEYLN 235
Query: 312 TDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 370
K+PLHD V+ F D +++A+Q+ +D Y++T+ YAN+I T +GGTH+ G ++++
Sbjct: 236 KTKEPLHDKVIYFEGIRDANIVEVAMQY-NDNYNETVFSYANNIATTEGGTHLTGFRSAI 294
Query: 371 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
T+ LN +K +++ D +LSGE VREGLT +ISV++P P+FEGQTKT+LGN E+R +V
Sbjct: 295 TKVLNDYARKFNIIRENDKNLSGEDVREGLTAVISVKLPEPQFEGQTKTKLGNSEIRTLV 354
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
+ V + L +LE +P + IL KSL+A +A AA++AR+L R+KS + SS+LPGKLAD
Sbjct: 355 ENVVSDKLNIFLEENPAIAKIILDKSLTAARARDAARKARELTRRKSAMDSSTLPGKLAD 414
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPL 528
CS P ++EIFIVEGDSAGGSAKQGRDR+ Q I+ PL
Sbjct: 415 CSEKDPTKTEIFIVEGDSAGGSAKQGRDRKIQAIL-PL 451
>gi|320531090|ref|ZP_08032119.1| DNA gyrase, B subunit [Selenomonas artemidis F0399]
gi|320136672|gb|EFW28625.1| DNA gyrase, B subunit [Selenomonas artemidis F0399]
Length = 684
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 241/467 (51%), Positives = 320/467 (68%), Gaps = 13/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLVYE++DN++DEA AGY + V
Sbjct: 53 VDADYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVYEVVDNSIDEALAGYCDTVAV 112
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V DNGRGIP+D+H + A+E VLTVLHAGGKFGG GY VSGGLHGVG
Sbjct: 113 TIHRDNSITVVDNGRGIPVDMH-ESGMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVG 169
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS S++V V RDG Y ++RG TT H V + + GTR+ F PD ++
Sbjct: 170 VSVVNALSSSMDVQVRRDGHIYEIAFARGN--TTEKLH--EVGTSETTGTRVHFVPDPEI 225
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FT + T+ R+RELAFLN +TI L E + +++ + F GG+ +V LN
Sbjct: 226 FTVTT-YSFETLKHRLRELAFLNHGITITLTDERGEELRSE--TFHFDGGIRSFVSHLNR 282
Query: 313 DKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
K+ +++ + F D +++A+Q+ +D+Y + + + N+I T +GGTH+ G K +LT
Sbjct: 283 KKETINEEPIYFNGVKDDTVVEIAMQY-NDSYQENIYSFVNNINTEEGGTHLAGFKIALT 341
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R N ++ +K+KD +LSGE VREGLT +IS++V P+FEGQTKT+LGN EVR +VD
Sbjct: 342 RAANDFARRLNVLKEKDGNLSGEDVREGLTAVISLKVREPQFEGQTKTKLGNSEVRGIVD 401
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E LTEY E +P+V +L K+L A +A AA++AR+L R+K+ L SSLPGKLADC
Sbjct: 402 SIVTEGLTEYFEENPNVTKKVLDKALMASRAREAARKARELTRRKNALEVSSLPGKLADC 461
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P++ EI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 462 SVKDPDQCEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNVEKA 507
>gi|404486886|ref|ZP_11022074.1| DNA gyrase, B subunit [Barnesiella intestinihominis YIT 11860]
gi|404335940|gb|EJZ62406.1| DNA gyrase, B subunit [Barnesiella intestinihominis YIT 11860]
Length = 651
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/472 (48%), Positives = 322/472 (68%), Gaps = 12/472 (2%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E +K+Y ++ IQVLEGLEAVRKRPAMYIG G +GLHHLVYE++DN++DEA AGYA++
Sbjct: 3 EETENKSYSADSIQVLEGLEAVRKRPAMYIGDIGVKGLHHLVYEVVDNSIDEALAGYATH 62
Query: 130 IEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 189
IEV + DNS+ V DNGRGIP+D+H +KSALE VLTVLHAGGKF S Y VSGGLH
Sbjct: 63 IEVYINEDNSIRVVDNGRGIPVDMHEKEHKSALEVVLTVLHAGGKFDKGS--YKVSGGLH 120
Query: 190 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 249
GVG+S VNALS L + R+G Y Q+YS GKP+ + + + GT I F PD
Sbjct: 121 GVGVSCVNALSTYLRAEIRRNGKIYMQEYSCGKPLHDVEI----IGETEETGTTIIFRPD 176
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY-NEYFFAG-GLEEYV 307
+F+ + +D+N +A R+R+LA+LN +T++L + + + +Y E F++ GL+E+V
Sbjct: 177 DSIFSVTV-YDYNILANRLRDLAYLNAGITLSLTDKRTTNDAGEYRKEVFYSKEGLKEFV 235
Query: 308 QWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 366
++++++K+ L DV+ + G+ +++A+ + + Y++ + Y N+I TI+GGTH+ G
Sbjct: 236 RYIDSNKEHLIDDVIHIATERQGVPVEVAMTYNT-TYNENVYSYVNNINTIEGGTHLTGF 294
Query: 367 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 426
+ LTRTL + SK ++ + +S + REGLT +ISV+V P+FEGQTKT+LGN EV
Sbjct: 295 RRGLTRTLKKYAEDSKMLEKVKVEISSDDFREGLTAVISVKVMEPQFEGQTKTKLGNSEV 354
Query: 427 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 486
VD +V E L YLE HP +I+ K + A A AA++AR++V++KS L LPG
Sbjct: 355 IGAVDTAVSEALANYLEEHPAQAKTIVEKVIIAATARHAARKAREMVQRKSPLSGGGLPG 414
Query: 487 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
KLADCSS PE+ EIF+VEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 415 KLADCSSRNPEDCEIFLVEGDSAGGSAKQGRDRMFQAIL-PLRGKILNVEKA 465
>gi|448609017|ref|ZP_21660296.1| DNA gyrase subunit B [Haloferax mucosum ATCC BAA-1512]
gi|445747394|gb|ELZ98850.1| DNA gyrase subunit B [Haloferax mucosum ATCC BAA-1512]
Length = 637
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/458 (50%), Positives = 314/458 (68%), Gaps = 11/458 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY IEVAL
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGYCDAIEVALHE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSV DNGRGIP+D H ++ ALE ++TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVTDNGRGIPVDTHEQYDRPALEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS+ LEV V RDG + ++ G+P + ++ + GT IRFWP+ ++F T
Sbjct: 125 NALSQKLEVEVKRDGAVWTHRFEHGEPKPDQFQRIRDLEPDEDTGTTIRFWPEGEIFETT 184
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+F T+ R+RELAFLN + I L E +D + F GG+ E+V++LN K
Sbjct: 185 -EFQFKTLENRLRELAFLNSGVEITLTDERTDGSST----FLFEGGIREFVEYLNETKTA 239
Query: 317 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LHD ++ + + + I +++A+Q +D ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 240 LHDEIIYYEDEAENIEVEIAMQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVIN 298
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+ + + D D SL GE +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 299 DYARSNNLLDDLD-SLKGEDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESITH 357
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L + E +P +I+ K++ A KA AAK+A +L R+KS L S++LPGKLADC S
Sbjct: 358 EQLGTFFEENPGTAQAIVMKAVEAAKARRAAKKAEELTRRKSALESTALPGKLADCQSRD 417
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P +SE+F+VEGDSAGGSAKQGRDR+FQ I+ P++ I
Sbjct: 418 PTKSELFVVEGDSAGGSAKQGRDRKFQAIL-PIKGKIL 454
>gi|284047394|ref|YP_003397733.1| DNA gyrase subunit B [Acidaminococcus fermentans DSM 20731]
gi|283951615|gb|ADB46418.1| DNA gyrase, B subunit [Acidaminococcus fermentans DSM 20731]
Length = 646
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/474 (50%), Positives = 327/474 (68%), Gaps = 19/474 (4%)
Query: 69 KENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
+E V YG+EQIQVLEGLEAVRKRP+MYIGS RGLHHLVYE++DN++DEA AGY
Sbjct: 10 EEIAVHGDYGAEQIQVLEGLEAVRKRPSMYIGSISGRGLHHLVYEVIDNSIDEALAGYCD 69
Query: 129 NIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 188
+I V + DNS++V DNGRGIP+++H K A+E V+TVLHAGGKFG GY VSGGL
Sbjct: 70 HIRVIIHPDNSITVTDNGRGIPVEMH-KVGKPAIEVVMTVLHAGGKFG--DGGYKVSGGL 126
Query: 189 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 248
HGVG+S VNALS+ + V V ++G Y ++S+GK TT +V ++ GT + FWP
Sbjct: 127 HGVGVSCVNALSKKMVVEVKKNGKIYGIEFSKGK--TTRPLYVKGECPENETGTSVTFWP 184
Query: 249 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQ 308
D +FT + + ++T+ RIRELAFLN + I L +D Q + + GG+ +V+
Sbjct: 185 DDTIFTETV-YSYDTLKHRIRELAFLNKGVKIQL----TDERSGQDEVFHYEGGIVSFVE 239
Query: 309 WLNTDKKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 364
++N K+PLH V G R+D +++A+Q+ +DAY++ + + N+I T +GGTH+
Sbjct: 240 FVNKGKEPLHAKPIYVEGERQDT---IVEVAMQY-TDAYTENIYTFVNNINTEEGGTHLA 295
Query: 365 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 424
G+K +LTR +N +K+ +KD + +LSG+ VREGLTC++S++V P+FEGQTKT+LGN
Sbjct: 296 GLKQALTRCINDYARKNSLLKDNEDNLSGDDVREGLTCVMSLKVREPQFEGQTKTKLGNS 355
Query: 425 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 484
EVR +VD V E LTEY E + V I+ K++ A +A AA++ARDL R+KS L SSL
Sbjct: 356 EVRGIVDNMVTEALTEYFEENAPVAKKIVEKAIMASRARSAARKARDLTRRKSALEVSSL 415
Query: 485 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PGKLADCSS E+EI++VEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 416 PGKLADCSSKNAAETEIYLVEGDSAGGSAKQGRDRNFQAIL-PLRGKILNVEKA 468
>gi|417925090|ref|ZP_12568517.1| DNA gyrase, B subunit [Finegoldia magna SY403409CC001050417]
gi|341592387|gb|EGS35273.1| DNA gyrase, B subunit [Finegoldia magna SY403409CC001050417]
Length = 638
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 237/468 (50%), Positives = 326/468 (69%), Gaps = 17/468 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y ++QI VLEGLE VR RP MYIGST +GLHHLVYE++DN++DEA AG I+V
Sbjct: 4 NREYTADQITVLEGLEPVRVRPGMYIGSTDEKGLHHLVYEVVDNSIDEALAGVCDLIKVT 63
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS+ V D+G GIP++ HP T KS LETVLTVLHAGGKF S+ Y SGGLHGVG+
Sbjct: 64 IKKDNSIIVEDDGSGIPVETHPKTGKSTLETVLTVLHAGGKF--SNDAYQYSGGLHGVGV 121
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDR-QGTRIRFWPDKQV 252
S VNALS L V RDG Y Q++ +GK VT LT V R GT I F PD +
Sbjct: 122 SCVNALSTYLIARVKRDGKMYEQRFEKGKTVTGLTV----VKENVRGTGTTIEFLPDDTI 177
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLN 311
F T + FD N +A R RE+AFLN + I E++ Y E F + GG++ +V+++N
Sbjct: 178 FET-LNFDRNVLAKRFREMAFLNKGVKIEFA-----DERDGYKELFHYEGGIKSFVEYIN 231
Query: 312 TDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 370
KKPL H+V+ + D +++A+Q+ +++Y++T++ + N+I+T+DGGTH+ G K++L
Sbjct: 232 KSKKPLDHEVMYIEGEKDTTKVEIAMQY-TESYNETIVSFTNNIKTVDGGTHVVGFKSAL 290
Query: 371 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
TR LN + +K+KD +LSG+ VREG+T ++SV++ NP+FEGQTK +LGN E R VV
Sbjct: 291 TRALNDYARNKNILKEKDDNLSGDDVREGITAVVSVKLNNPQFEGQTKGKLGNSEARTVV 350
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
D V E+L+ Y E +P ++ +I+ K+L++ KA LAA+RARDLVR+KSVL +++LPGKLAD
Sbjct: 351 DSVVYEHLSFYFEENPKIVRTIIQKALASQKARLAARRARDLVRKKSVLDNTTLPGKLAD 410
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
C S+ E +EIF+VEGDSAGGSAK GRD +FQ I+ PL+ I A
Sbjct: 411 CQSSDIEYNEIFLVEGDSAGGSAKGGRDNKFQAIL-PLRGKILNVEKA 457
>gi|397905911|ref|ZP_10506745.1| DNA gyrase subunit B [Caloramator australicus RC3]
gi|397161079|emb|CCJ34080.1| DNA gyrase subunit B [Caloramator australicus RC3]
Length = 631
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/462 (51%), Positives = 323/462 (69%), Gaps = 14/462 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+SK Y + +IQVLEGLEAVRKRP MYIGSTGPRGLHHLVYEI+DNA+DEA AG+ NI+V
Sbjct: 1 MSKKYSASEIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEIVDNAIDEALAGFCKNIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V D+GRGIP+D+HP KSA+E V TVLHAG KFGG S LHGVG
Sbjct: 61 FIHKDNSITVIDDGRGIPVDIHPKLKKSAVEVVFTVLHAGSKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
SVVNALS+ L V V RDG + QKY RGKPV+ L + + GT++ F D ++
Sbjct: 119 ASVVNALSKWLIVEVKRDGKIFRQKYERGKPVSELEV----IGEAEETGTKVTFLADDEI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F T +++++ ++ R+RELAFLN + I L E D ++ Y + GG++E+V++LN
Sbjct: 175 FETT-EYEYDVLSQRLRELAFLNKGIAINLIDERVDKKET----YHYEGGIKEFVKYLNR 229
Query: 313 DKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K+ LHD + F D +++ALQ+ +D Y++ + +AN+I T +GGTH+ G K +LT
Sbjct: 230 NKEVLHDEPIYFEASKDDTVVEIALQY-NDGYNENIFSFANNISTTEGGTHVSGFKTALT 288
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
+ +N +K +K+ + +L GE REG+T +ISV++ NPEFEGQTKT+LGN EVR +VD
Sbjct: 289 KVINDYARKYGFLKENEKNLQGEDTREGITAVISVKITNPEFEGQTKTKLGNTEVRGIVD 348
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V + ++ +LE +P V I+ K L A +A AA++AR+L R+K+VL ++SLPGKLADC
Sbjct: 349 AIVTDKVSAFLEENPSVAKVIVEKCLLASRAREAARKARELTRRKNVLENTSLPGKLADC 408
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
S P+ EIF+VEGDSAGGSAK GRDRRFQ I+ PL+ I
Sbjct: 409 SEKDPKLCEIFLVEGDSAGGSAKGGRDRRFQAIL-PLRGKIM 449
>gi|188584649|ref|YP_001916194.1| DNA gyrase subunit B [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179349336|gb|ACB83606.1| DNA gyrase subunit B [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 640
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/466 (47%), Positives = 320/466 (68%), Gaps = 12/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ Y QIQVLEGLEAVRKRP MYIGST RGLHHLV+E++DN++DEA AGY +I +
Sbjct: 9 EQNYDESQIQVLEGLEAVRKRPGMYIGSTDERGLHHLVHEVVDNSIDEAMAGYCDDIRIK 68
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
L N V V DNGRGIP+ HP K LE ++T LHAGGKF S+ Y VSGGLHGVG+
Sbjct: 69 LEPGNKVRVTDNGRGIPVKDHPKIKKPTLEVIMTYLHAGGKF--SNDSYKVSGGLHGVGI 126
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVN LS+ + V V+RDG Y Q+Y +G P T + + D++GT I F PD+++F
Sbjct: 127 SVVNGLSKWIRVKVYRDGKVYQQEYEKGYPKTEIK----EIGESDKRGTEIIFLPDEEIF 182
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T ++FD+ + R+++LAFLN ++I + E D K ++ + + GG++ +V++LN +
Sbjct: 183 ET-VEFDYQVLRNRLQQLAFLNRGVSITISDEREDEFKEEH--FKYEGGIKSFVEYLNEN 239
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K L V + +G +++A+Q+ +D Y + + YAN+I T +GGTH G K SLTR
Sbjct: 240 KTTLFTPPVYIEGEQEGCKLEVAIQY-NDGYQEMIHSYANNINTHEGGTHESGFKISLTR 298
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
T+N ++ +K+ D +L+GE +REG+T IISV+V +P+FEGQTKT+LGN EVR++V+
Sbjct: 299 TVNDYARRHNLLKNGDKNLTGEDIREGITAIISVKVEDPQFEGQTKTKLGNSEVRRIVEG 358
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
V E+L YLE +P V I++K+++A +A AA++A++L R+K+ L ++LPGKLADC+
Sbjct: 359 IVSEHLESYLEENPAVGKKIVNKAINASRAREAARKAKELTRRKNALEVTALPGKLADCT 418
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
+ +SE+++VEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 419 TKDASKSELYLVEGDSAGGSAKQGRDREFQAIL-PLRGKILNVEKA 463
>gi|383829563|ref|ZP_09984652.1| DNA gyrase, B subunit [Saccharomonospora xinjiangensis XJ-54]
gi|383462216|gb|EID54306.1| DNA gyrase, B subunit [Saccharomonospora xinjiangensis XJ-54]
Length = 655
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/474 (48%), Positives = 318/474 (67%), Gaps = 22/474 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + I VLEGLEAVRKRP MYIGSTG RGLHHL++E++DN+VDEA AG+A+ +EV LLA
Sbjct: 8 YSASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEAMAGHATRVEVTLLA 67
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D V V D+GRGIP+ +HP K LE VLT LHAGGKF G S Y+VSGGLHGVG+SVV
Sbjct: 68 DGGVRVVDDGRGIPVGVHPVYGKPTLEIVLTQLHAGGKFDGES--YAVSGGLHGVGVSVV 125
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS +L+V V DG + Q Y + P +L DR GT + FW D +F T
Sbjct: 126 NALSTALDVEVHLDGKIWVQHYEKSVP-----GELLEKGPTDRTGTSVTFWADPDIFETT 180
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKED-SDPEKNQ----------YNEYFFAGGLEE 305
+ T+A R++E+AFLN LTI LR E SD E+ Q Y + GGLE+
Sbjct: 181 T-YSAETVARRLQEMAFLNKGLTIVLRDERVSDDEEGQDATGERAHLKERTYCYPGGLED 239
Query: 306 YVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 364
+V+ +N ++ +H VV F + DG+ +++A+QW ++ ++ ++ +AN+I T +GGTH E
Sbjct: 240 FVRHINASREAIHPSVVSFEQKGDGLEVEVAMQW-NNGFTPSVYTFANTINTHEGGTHEE 298
Query: 365 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 424
G +A+LTR +N+ + K +K+KD +L+G+ VREGL I+S+++ P+FEGQTKT+LGN
Sbjct: 299 GFRAALTRVVNAYARDKKLLKEKDANLTGDDVREGLAAIVSIKLAEPQFEGQTKTKLGNS 358
Query: 425 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 484
E R V + E++ ++ E +P I++K++S+ +A +AA++ARDLVR+K + L
Sbjct: 359 EARSFVQTTCNEWIADWFERNPAEAKIIINKAVSSAQARMAARKARDLVRRKGAMDIGGL 418
Query: 485 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PGKL DC S PEE E++IVEGDSAGGSAK+GRD RFQ I+ P++ I A
Sbjct: 419 PGKLKDCRSRDPEECELYIVEGDSAGGSAKEGRDSRFQAIL-PIRGKIINVEKA 471
>gi|332980610|ref|YP_004462051.1| DNA gyrase subunit B [Mahella australiensis 50-1 BON]
gi|332698288|gb|AEE95229.1| DNA gyrase subunit B [Mahella australiensis 50-1 BON]
Length = 633
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 238/464 (51%), Positives = 323/464 (69%), Gaps = 20/464 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S Y + QIQVLEGLE VRKRP MYIGSTGPRGLHHLVYE++DN++DE AG+ I++
Sbjct: 4 SGAYDASQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEVLAGFCDTIKII 63
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++V DNGRGIP+ +HP T +SA+E LT+LHAG KFGG S LHGVG+
Sbjct: 64 IHKDNSITVEDNGRGIPVGIHPKTGRSAVEVALTMLHAGSKFGGGGYKVSGG--LHGVGV 121
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE L VTV ++G Y Q+Y RGKPVT L + D GT I F PD QVF
Sbjct: 122 SVVNALSEWLIVTVKQNGHIYRQRYERGKPVTDLEV----IGDTDETGTTISFKPDYQVF 177
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
++++++T+ R RELAFLN ++TI L E D ++ E+ + GG+ +V++LN +
Sbjct: 178 E-ELEYNYDTLRNRFRELAFLNKEVTITLIDERDDKKE----EFHYEGGIVSFVEYLNKN 232
Query: 314 KKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
K PLH + G R DV +++A+Q+ +D+Y +++ +AN+I T +GGTH+ G +++
Sbjct: 233 KSPLHKEAIYISGMRDDV---QVEVAIQY-NDSYVESVYAFANNIETPEGGTHLSGFRSA 288
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
+T+ +N +K +K + SLSG+ VREGLT IISV++ +P+FEGQTK +LGN EVR +
Sbjct: 289 MTKVINDYARKLNMLKPNEPSLSGDDVREGLTAIISVKLSDPQFEGQTKEKLGNSEVRGI 348
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
VD V + L+ Y E HP V I+ K++SA +A AA++AR+L R+KS L S S+PGKLA
Sbjct: 349 VDSIVSDGLSTYFEEHPSVTKIIIEKAISAFRAREAARKARELTRRKSALESVSMPGKLA 408
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
DCS P+ EIF+VEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 409 DCSERDPKLCEIFLVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 451
>gi|189464548|ref|ZP_03013333.1| hypothetical protein BACINT_00891 [Bacteroides intestinalis DSM
17393]
gi|189438338|gb|EDV07323.1| DNA gyrase, B subunit [Bacteroides intestinalis DSM 17393]
Length = 653
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/471 (48%), Positives = 316/471 (67%), Gaps = 12/471 (2%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
N S Y +E IQVLEGLEAVRKRPAMYIG +GLHHLVYE++DN++DEA AGY +I
Sbjct: 7 NSNSGNYSAENIQVLEGLEAVRKRPAMYIGDISTKGLHHLVYEVVDNSIDEALAGYCDHI 66
Query: 131 EVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 190
EV + DNS++V DNGRGIP+D H KSALE V+TVLHAGGKF S Y VSGGLHG
Sbjct: 67 EVTINEDNSITVQDNGRGIPVDFHEKEQKSALEVVMTVLHAGGKFDKGS--YKVSGGLHG 124
Query: 191 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 250
VG+S VNALS + V+R+G Y Q+Y G P+ V + + D GTR +FWPD
Sbjct: 125 VGVSCVNALSTHMTTQVFRNGKIYQQEYECGHPLYP----VKEIGTSDITGTRQQFWPDN 180
Query: 251 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK-EDSDPEKNQYNEYFFAG-GLEEYVQ 308
+FT + +++ +A R+RELA+LN + I L D E N E F++ GL+E+V+
Sbjct: 181 TIFTDTV-YNYEILATRMRELAYLNAGIKITLTDLRVKDEENNAKMEIFYSEEGLKEFVR 239
Query: 309 WLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
++++ ++ L +DV+ + G +++A+ + + +Y++ + Y N+I TI+GGTH+ G +
Sbjct: 240 YIDSSREHLVNDVIYINTEKQGTPVEVAIMYNT-SYNENIHSYVNNINTIEGGTHLAGFR 298
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
+LTRTL +K ++ + ++G+ REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 299 RALTRTLKKYADDNKMLEKAKVEIAGDDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVM 358
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
VDQ+V E L YLE HP ++ K + A +A +AA++AR+ V++KS + +PGK
Sbjct: 359 GAVDQAVGEALNYYLEEHPKEAKMVVDKVILAAQARVAARKARESVQRKSPMSGGGMPGK 418
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LADCSS PEE E+F+VEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 419 LADCSSKDPEECELFLVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNVEKA 468
>gi|313894727|ref|ZP_07828288.1| DNA gyrase, B subunit [Selenomonas sp. oral taxon 137 str. F0430]
gi|312976636|gb|EFR42090.1| DNA gyrase, B subunit [Selenomonas sp. oral taxon 137 str. F0430]
Length = 684
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 241/467 (51%), Positives = 320/467 (68%), Gaps = 13/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLVYE++DN++DEA AGY + V
Sbjct: 53 VDADYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVYEVVDNSIDEALAGYCDTVAV 112
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V DNGRGIP+D+H + A+E VLTVLHAGGKFGG GY VSGGLHGVG
Sbjct: 113 TIHRDNSITVVDNGRGIPVDMH-ESGMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVG 169
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS S++V V RDG Y ++RG TT H V + + GTR+ F PD ++
Sbjct: 170 VSVVNALSSSMDVQVRRDGHIYEIAFARGN--TTEKLH--EVGTSETTGTRVHFVPDPEI 225
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FT + T+ R+RELAFLN +TI L E + +++ + F GG+ +V LN
Sbjct: 226 FTVTT-YSFETLKHRLRELAFLNHGITITLTDERGEELRSE--TFHFDGGIRSFVSHLNR 282
Query: 313 DKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
K+ +++ + F D +++A+Q+ +D+Y + + + N+I T +GGTH+ G K +LT
Sbjct: 283 KKETINEEPIYFNGVKDDTVVEIAMQY-NDSYQENIYSFVNNINTEEGGTHLAGFKIALT 341
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R N ++ +K+KD +LSGE VREGLT +IS++V P+FEGQTKT+LGN EVR +VD
Sbjct: 342 RAANDFARRLSVLKEKDGNLSGEDVREGLTAVISLKVREPQFEGQTKTKLGNSEVRGIVD 401
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E LTEY E +P+V +L K+L A +A AA++AR+L R+K+ L SSLPGKLADC
Sbjct: 402 SIVTEGLTEYFEENPNVTKKVLDKALMASRAREAARKARELTRRKNALEVSSLPGKLADC 461
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P++ EI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 462 SVKDPDQCEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNVEKA 507
>gi|384209248|ref|YP_005594968.1| D Gyrase B subunit [Brachyspira intermedia PWS/A]
gi|343386898|gb|AEM22388.1| D Gyrase B subunit [Brachyspira intermedia PWS/A]
Length = 636
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/465 (49%), Positives = 307/465 (66%), Gaps = 12/465 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
KTY S+ IQVLEGL+ VRKRP MYIGSTG +GLHHLVYE++DN++DEA AGY NI V +
Sbjct: 5 KTYSSKNIQVLEGLDPVRKRPGMYIGSTGAQGLHHLVYEVVDNSIDEAMAGYCKNITVTI 64
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
N + V D+GRGIP+D+HP SALE V+T LHAGGKF + Y VSGGLHGVG+S
Sbjct: 65 KKGNIIQVEDDGRGIPVDMHPKLKISALEVVMTKLHAGGKFDNET--YKVSGGLHGVGVS 122
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS L V +DG Y Q Y RG P V V + + GT + F D ++F
Sbjct: 123 VVNALSTELIAEVNKDGKLYRQVYHRGIPEEP----VKEVGTSKKTGTTVTFKADDEIFE 178
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
T + +D+ +A R+RELAFLN + I L D + NE+++ GG+E ++ LN +K
Sbjct: 179 TTV-YDYKILANRLRELAFLNRGIRITLV--DEREAEVVSNEFYYEGGIEMFIAHLNENK 235
Query: 315 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
KPLHD + K+ D +++A+Q+ DAY++ + Y N+I T +GGTH+ G + +LTR
Sbjct: 236 KPLHDKPIYLHKNEDKTDVEVAMQYV-DAYNENIFTYCNNINTTEGGTHLVGFRTALTRV 294
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
KK + K I+ GE REGL ++SV++PNP+FEGQTKT+LGN EVR V ++
Sbjct: 295 YTDFAKKLELDKKSKITFMGEDTREGLVAVVSVKIPNPQFEGQTKTKLGNTEVRAVTEKL 354
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
V E L +Y +P V+ +IL K +SA +A AA++ARDL R+K+ L S SLPGKLADCS
Sbjct: 355 VVEGLNDYFSQNPKVIKAILEKIISAAQAREAARKARDLARRKNALESDSLPGKLADCSE 414
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
++ E+++VEGDSAGG+AK GRDR FQ I+ PL+ + A
Sbjct: 415 QEVDKCEVYLVEGDSAGGTAKGGRDRHFQAIL-PLRGKVLNVEKA 458
>gi|19909727|dbj|BAB87059.1| DNA gyrase subunit B [Microcystis viridis NIES-102]
Length = 381
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/386 (58%), Positives = 294/386 (76%), Gaps = 8/386 (2%)
Query: 108 HHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLT 167
HHLVYE++DN++DEA AGY ++IEV + AD SVSV D+GRGIP D+HP T KSALETVLT
Sbjct: 1 HHLVYEVVDNSIDEALAGYCTHIEVDIKADGSVSVTDDGRGIPTDVHPTTGKSALETVLT 60
Query: 168 VLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTL 227
+LHAGGKFG S GY VSGGLHGVG+SVVNALS ++VTVWRD + Q+Y RG PVT L
Sbjct: 61 ILHAGGKFG--SGGYKVSGGLHGVGISVVNALSAWVDVTVWRDHKVHTQRYERGIPVTEL 118
Query: 228 TCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDS 287
V +++ GTR+ F PD ++F+ I+FD++T++GR+RELA+LN + I D
Sbjct: 119 ---VSSPSQEEKTGTRVNFLPDTEIFSQGIEFDYSTLSGRLRELAYLNAGVKITF--SDY 173
Query: 288 DPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDT 346
PE+ Y + GG++EYV ++ +++ LH D++ + +GI I++A QWC DAYSD
Sbjct: 174 RPEEPHIETYCYEGGIKEYVAYMCRERETLHRDIIYVSGEKNGINIEVAFQWCIDAYSDN 233
Query: 347 MLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISV 406
+LG+AN+IRTIDGGTH+EG+KA LTRTLN++ +K +K+ + +L+GE+VREGLT +ISV
Sbjct: 234 ILGFANNIRTIDGGTHLEGLKAVLTRTLNNVARKRNKIKENEPNLAGENVREGLTAVISV 293
Query: 407 RVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAA 466
+VP PEFEGQTKT+LGN EVR +VD V E L EYLE +P V D+I+ K++ A KAA AA
Sbjct: 294 KVPEPEFEGQTKTKLGNTEVRGIVDSLVGETLNEYLEQNPQVADTIIEKAVQAYKAAEAA 353
Query: 467 KRARDLVRQKSVLRSSSLPGKLADCS 492
+RARDLVR+KSVL SS LPGKLADCS
Sbjct: 354 RRARDLVRRKSVLESSPLPGKLADCS 379
>gi|288925541|ref|ZP_06419474.1| DNA gyrase, B subunit [Prevotella buccae D17]
gi|315606674|ref|ZP_07881685.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella buccae
ATCC 33574]
gi|402307320|ref|ZP_10826346.1| DNA gyrase, B subunit [Prevotella sp. MSX73]
gi|288337757|gb|EFC76110.1| DNA gyrase, B subunit [Prevotella buccae D17]
gi|315251684|gb|EFU31662.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella buccae
ATCC 33574]
gi|400378834|gb|EJP31685.1| DNA gyrase, B subunit [Prevotella sp. MSX73]
Length = 656
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/464 (50%), Positives = 309/464 (66%), Gaps = 15/464 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHLV E +DN++DEA AGY NIEV +
Sbjct: 10 NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLVNETVDNSIDEAMAGYCKNIEVTIN 69
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V D+GRGIP+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 70 EDNSITVQDDGRGIPVDEHKKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 127
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS + V+RDG Y Q+Y +GKP+ + V DRQGTR +FWPD VFTT
Sbjct: 128 VNALSSHMLSQVFRDGKIYQQEYEKGKPLYPVKV----VGETDRQGTRQQFWPDPTVFTT 183
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDK 314
+ + + IA R+RELAFLN + I LR D E E F A GL+E+V++++ +
Sbjct: 184 TV-YKWDIIASRMRELAFLNAGIRITLRDLRPDEEGKTREEVFHAEQGLKEFVRYVDRHR 242
Query: 315 KPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
L DV+ + + G+ I++A+ + +D YS+ + Y N+I TI+GGTH+ G +A+LTR
Sbjct: 243 THLFDDVIYLKTEKQGVPIEVAIMYNTD-YSENIHSYVNNINTIEGGTHLTGFRAALTRV 301
Query: 374 LNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
L + SK ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 302 LKAYADNDAQISKQIEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVAGA 361
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
V Q+V E L YLE HP I K + A A +AA++AR+ V++KSV+ LPGKLA
Sbjct: 362 VQQAVGEALNNYLEEHPVEAKKICEKVVLAATARIAARKARESVQRKSVMSGGGLPGKLA 421
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
DCS+ P++ EIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 422 DCSNKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAIL-PLRGKIL 464
>gi|224536623|ref|ZP_03677162.1| hypothetical protein BACCELL_01499 [Bacteroides cellulosilyticus
DSM 14838]
gi|423223514|ref|ZP_17209983.1| DNA gyrase, B subunit [Bacteroides cellulosilyticus CL02T12C19]
gi|224521714|gb|EEF90819.1| hypothetical protein BACCELL_01499 [Bacteroides cellulosilyticus
DSM 14838]
gi|392638394|gb|EIY32235.1| DNA gyrase, B subunit [Bacteroides cellulosilyticus CL02T12C19]
Length = 653
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/471 (48%), Positives = 318/471 (67%), Gaps = 12/471 (2%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
N + +Y +E IQVLEGLEAVRKRPAMYIG +GLHHLVYE++DN++DEA AGY +I
Sbjct: 7 NSNNGSYSAENIQVLEGLEAVRKRPAMYIGDISTKGLHHLVYEVVDNSIDEALAGYCDHI 66
Query: 131 EVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 190
EV + DNS++V DNGRGIP+D H KSALE V+TVLHAGGKF S Y VSGGLHG
Sbjct: 67 EVTINEDNSITVQDNGRGIPVDFHEKEKKSALEVVMTVLHAGGKFDKGS--YKVSGGLHG 124
Query: 191 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 250
VG+S VNALS + V+R+G Y Q+Y G P+ V + + D GTR +FWPD
Sbjct: 125 VGVSCVNALSTHMTTQVFRNGKIYQQEYECGHPLYP----VKEIGTSDITGTRQQFWPDN 180
Query: 251 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK-EDSDPEKNQYNEYFFAG-GLEEYVQ 308
+FT + +++ +A R+RELA+LN + I L D E N E F++ GL+E+V+
Sbjct: 181 TIFTETV-YNYEILATRMRELAYLNAGIKITLTDLRVKDEENNAKMEVFYSEEGLKEFVR 239
Query: 309 WLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
++++ ++ L +DV+ + G +++A+ + + +Y++ + Y N+I TI+GGTH+ G +
Sbjct: 240 YIDSSREHLVNDVIYINTEKQGTPVEVAIMYNT-SYNENIHSYVNNINTIEGGTHLAGFR 298
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
+LTRTL + +K ++ + ++G+ REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 299 RALTRTLKKYAEDNKMLEKAKVEIAGDDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVM 358
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
VDQ+V E L YLE HP ++ K + A +A +AA++AR+ V++KS + +PGK
Sbjct: 359 GAVDQAVGEALNYYLEEHPKEAKMVVDKVILAAQARVAARKARESVQRKSPMSGGGMPGK 418
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LADCSS PEE E+F+VEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 419 LADCSSKDPEECELFLVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNVEKA 468
>gi|448446611|ref|ZP_21590833.1| DNA gyrase subunit B [Halorubrum saccharovorum DSM 1137]
gi|445683755|gb|ELZ36145.1| DNA gyrase subunit B [Halorubrum saccharovorum DSM 1137]
Length = 644
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 238/467 (50%), Positives = 322/467 (68%), Gaps = 12/467 (2%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
P YG+ QIQVLEGL+AVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY I
Sbjct: 2 PEQNDYGAGQIQVLEGLQAVRKRPAMYIGSTDGRGLHHLVYEVVDNSIDEALAGYCDEIT 61
Query: 132 VALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 191
V + DNSVSV+D+GRGIP+D H ++ ALE ++TVLHAGGKF S Y VSGGLHGV
Sbjct: 62 VTIHDDNSVSVSDDGRGIPVDTHEKYDRPALEVIMTVLHAGGKF--DSKSYQVSGGLHGV 119
Query: 192 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 251
G+SVVNALSE LEV V RDG Y ++ RG+P V +D ++ GT IRFWPD++
Sbjct: 120 GVSVVNALSERLEVEVKRDGGVYRHEFHRGEPAEDGFERVRDLDDEE-TGTYIRFWPDEE 178
Query: 252 VF-TTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYV 307
+F TTA +F +T+A R+RELAFLN + ++L R E + + + + GG+ E+V
Sbjct: 179 IFETTAFEF--STLANRLRELAFLNSGVAVSLVDERDEGAVDDAGDEETFRYEGGIREFV 236
Query: 308 QWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 366
+LN + P+HD V+ F + D I +++A+Q ++ ++ +AN+I T +GGTH+ G
Sbjct: 237 GYLNETRTPIHDEVIYFEDEQDDIHVEVAMQ-ATEELQGSVHAFANNINTREGGTHLTGF 295
Query: 367 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 426
K +LTRT+N + V D D +L GE VREGLT +ISV+ P+P+FEGQTKT+LGN EV
Sbjct: 296 KTALTRTVNDYANEHGLVDDLDANLKGEDVREGLTAVISVKHPDPQFEGQTKTKLGNSEV 355
Query: 427 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 486
R +V+ + E L + E +PD ++ K+ A +A AAK+A +L R+KS L S++LPG
Sbjct: 356 RGIVESATHEKLGTFFEENPDTARKVVHKAAEAARARKAAKKAEELTRRKSALESTALPG 415
Query: 487 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
KLADC + P E+E+F+VEGDSAGGSAKQGR+R Q I+ PL+ I
Sbjct: 416 KLADCQTRDPTEAELFVVEGDSAGGSAKQGRNRENQAIL-PLKGKIL 461
>gi|307243405|ref|ZP_07525562.1| DNA gyrase, B subunit [Peptostreptococcus stomatis DSM 17678]
gi|306493215|gb|EFM65211.1| DNA gyrase, B subunit [Peptostreptococcus stomatis DSM 17678]
Length = 635
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 241/458 (52%), Positives = 319/458 (69%), Gaps = 11/458 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG++QIQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN++DEA AG S I +++
Sbjct: 6 YGADQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGNCSEIYISINP 65
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV+V D+GRGIP+++HP T S LETVLTVLHAGGKFGG S LHGVG+SVV
Sbjct: 66 DGSVTVKDDGRGIPVEVHPKTGLSTLETVLTVLHAGGKFGGGGYKVSGG--LHGVGVSVV 123
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS+ L V RDG Y Q+Y RG P L V+ SKD GT I F PD +F
Sbjct: 124 NALSDWLVAEVSRDGKVYRQEYKRGVPTGKL--EVVSESSKD-SGTSITFMPDASIFD-E 179
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
I+F + T+ R REL+FLN + I ED + + + + GGL EY+++LN K P
Sbjct: 180 IEFKYETLEYRFRELSFLNKVIKIEF--EDKREGQEESKTFHYTGGLVEYIKYLNRTKTP 237
Query: 317 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
+HD ++ K + TI+LALQ+ +DAY++ + +AN+I T +GG H+ G KA+LT+ +N
Sbjct: 238 IHDQIIYVDKIANDCTIELALQY-TDAYTENIYSFANNINTHEGGVHLSGFKAALTKCVN 296
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+++ +K+KD +LSGE +REGLT I+SV++P+P+FEGQTKT+LGN +R +VD
Sbjct: 297 DYARRNNILKEKDPNLSGEDIREGLTAIVSVKLPDPQFEGQTKTKLGNTFMRGLVDSIAN 356
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E + +LE +P V ++ K L A +A AAK+ARDL R+K+ L +SLPGKLADCS +
Sbjct: 357 EEIGAFLEENPSVAKLVIEKCLRAQRAREAAKKARDLTRRKNALEFTSLPGKLADCSEKS 416
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
PE+SEIF+VEGDSAGGSAK GRDR Q I+ PL+ I
Sbjct: 417 PEKSEIFLVEGDSAGGSAKSGRDRNIQAIL-PLRGKIL 453
>gi|448373987|ref|ZP_21557872.1| DNA gyrase subunit B [Halovivax asiaticus JCM 14624]
gi|445660664|gb|ELZ13459.1| DNA gyrase subunit B [Halovivax asiaticus JCM 14624]
Length = 643
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 238/463 (51%), Positives = 323/463 (69%), Gaps = 9/463 (1%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DNA+DEA AG+ +I V
Sbjct: 4 EREYGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNAIDEALAGHCEDITVT 63
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ D SVSV D+GRGIP+D+H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+
Sbjct: 64 IHEDGSVSVVDDGRGIPVDIHEEYDRPALEVILTVLHAGGKF--DSKSYQVSGGLHGVGV 121
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE LEVTV RDG Y + RG+P + V D+ + GT IRFWPD Q+F
Sbjct: 122 SVVNALSERLEVTVTRDGGIYEHGFDRGEPDGEME-QVGEPDASNETGTSIRFWPDDQIF 180
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKE-DSDPEKNQYNEYF-FAGGLEEYVQWLN 311
T ++F + T++ R+RELAFLN + I LR E + D E E F + GG+ E+V+++N
Sbjct: 181 ET-LEFSYATLSNRLRELAFLNSGVAITLRDEREVDDEGVIVQETFEYDGGIREFVEYIN 239
Query: 312 TDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 370
+ PLH DVV F + I +++A+Q ++ ++ +AN+I T +GGTH+ G K +L
Sbjct: 240 ETRSPLHRDVVYFTDEDQSIQVEVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTAL 298
Query: 371 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
TR +N ++ + D D +L GE +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V
Sbjct: 299 TRVVNDYANENDLLSDLDENLKGEDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIV 358
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
+ ++ + L Y E +PD +I+ K++ A KA AAK+A +L R+KS L S++LPGKLAD
Sbjct: 359 EGAMHDGLATYFEENPDTAQAIVLKAVEAAKARKAAKQAEELTRRKSALDSTALPGKLAD 418
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
C + P+E+E+FI EGDSAGGSAKQ R+ +Q I+ P++ I
Sbjct: 419 CQTRDPDEAELFIAEGDSAGGSAKQARNPDYQAIL-PIKGKIL 460
>gi|402304103|ref|ZP_10823182.1| DNA gyrase, B subunit [Selenomonas sp. FOBRC9]
gi|400376029|gb|EJP28922.1| DNA gyrase, B subunit [Selenomonas sp. FOBRC9]
Length = 684
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/467 (51%), Positives = 320/467 (68%), Gaps = 13/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLVYE++DN++DEA AGY + V
Sbjct: 53 VDADYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVYEVVDNSIDEALAGYCDTVAV 112
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V DNGRGIP+D+H + A+E VLTVLHAGGKFGG GY VSGGLHGVG
Sbjct: 113 TIHRDNSITVVDNGRGIPVDMH-ESGMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVG 169
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS S++V V RDG Y ++RG TT H + + + GTR+ F PD ++
Sbjct: 170 VSVVNALSSSMDVQVRRDGHIYEISFARGN--TTEKLH--EIGTSETTGTRVHFVPDPEI 225
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FT + T+ R+RELAFLN +TI L E + +++ + F GG+ +V LN
Sbjct: 226 FTVTT-YSFETLKHRLRELAFLNHGITITLTDERGEELRSE--TFHFDGGIRSFVSHLNR 282
Query: 313 DKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
K+ +++ + F D +++A+Q+ +D+Y + + + N+I T +GGTH+ G K +LT
Sbjct: 283 KKETINEEPIYFNGVKDDTVVEIAMQY-NDSYQENIYSFVNNINTEEGGTHLAGFKIALT 341
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R N ++ +K+KD +LSGE VREGLT +IS++V P+FEGQTKT+LGN EVR +VD
Sbjct: 342 RAANDFARRLSVLKEKDGNLSGEDVREGLTAVISLKVREPQFEGQTKTKLGNSEVRGIVD 401
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E LTEY E +P+V +L K+L A +A AA++AR+L R+K+ L SSLPGKLADC
Sbjct: 402 SIVTEGLTEYFEENPNVTKKVLDKALMASRAREAARKARELTRRKNALEVSSLPGKLADC 461
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P++ EI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 462 SVKDPDQCEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNVEKA 507
>gi|410656647|ref|YP_006909018.1| DNA gyrase subunit B [Dehalobacter sp. DCA]
gi|410659625|ref|YP_006911996.1| DNA gyrase subunit B [Dehalobacter sp. CF]
gi|409019002|gb|AFV01033.1| DNA gyrase subunit B [Dehalobacter sp. DCA]
gi|409021981|gb|AFV04011.1| DNA gyrase subunit B [Dehalobacter sp. CF]
Length = 644
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 242/470 (51%), Positives = 325/470 (69%), Gaps = 16/470 (3%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
NP S Y + QI+VLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AGY I
Sbjct: 12 NPGSD-YNAGQIEVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSIDEAMAGYCDEI 70
Query: 131 EVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 190
EV + S++V DNGRGIP+D+H K A+E LTVLHAGGKF ++ Y VSGGLHG
Sbjct: 71 EVIIHQGESITVQDNGRGIPVDMHAKMQKPAVEVALTVLHAGGKF--NNEAYKVSGGLHG 128
Query: 191 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDS-KDRQGTRIRFWPD 249
VG+SVVNALS +L V + +DG +Y Q+YSRGK +T L + + + R GT I F PD
Sbjct: 129 VGMSVVNALSVNLRVEIKKDGKKYSQEYSRGKTLTELK----EIGTYQGRSGTMITFQPD 184
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 309
++F I +D+ +A R++EL+FLN + I L E ++ K+ YN GL ++V++
Sbjct: 185 PEIFED-IVYDYEVLAHRLKELSFLNKNVMITLIDERNEA-KDVYNH---NNGLIDFVEY 239
Query: 310 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
LN +K P+H + F + D +++ALQ+ +++Y++T+ YAN+I T +GGTH G KA
Sbjct: 240 LNKNKDPIHQKAIVFETEKDNTKVEIALQY-NESYTETLFSYANNINTTEGGTHEAGFKA 298
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
+LTR +N +K+ +K + +LSGE VREGLT IISV++ P+FEGQTKT+LGN EVR
Sbjct: 299 ALTRVVNDYARKNNILKGNENNLSGEDVREGLTAIISVKIMEPQFEGQTKTKLGNSEVRS 358
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+VD V E LT + E +P V I+ K L A +A LAA++ARDL R+KS L S+SLPGKL
Sbjct: 359 IVDSVVGEGLTTFFEENPAVAKKIVEKGLQATRARLAARKARDLTRRKSALESTSLPGKL 418
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
ADC+ P E++IVEGDSAGGSAKQGR+++FQ I+ PL+ I A
Sbjct: 419 ADCTWKDPRYCEMYIVEGDSAGGSAKQGRNQKFQAIL-PLRGKILNVEKA 467
>gi|433601844|ref|YP_007034213.1| DNA gyrase subunit B [Saccharothrix espanaensis DSM 44229]
gi|407879697|emb|CCH27340.1| DNA gyrase subunit B [Saccharothrix espanaensis DSM 44229]
Length = 656
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/474 (46%), Positives = 323/474 (68%), Gaps = 21/474 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + I VLEGLEAVRKRP MYIGSTG RGLHHL++E++DN+VDEA AGYA+ ++V LLA
Sbjct: 8 YSASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEAMAGYATKVDVTLLA 67
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
+ V V D+GRGIP+ +HP K LE VLT LHAGGKF S Y+VSGGLHGVG+SVV
Sbjct: 68 NGGVRVIDDGRGIPVGMHPVEQKPTLEVVLTKLHAGGKF--DSDSYAVSGGLHGVGISVV 125
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS +++V + DG ++Q+Y KP L ++ + GT I +W D +F T
Sbjct: 126 NALSTAIDVEIKTDGFTWNQRYEATKPAHELRQG----EATEETGTTITYWADPDIFETT 181
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKE---DSDPEKN--------QYNEYFFAGGLEE 305
+++ TI+ R++E+AFLN LTI LR E D+D E + + + + GGLE+
Sbjct: 182 -EYNIETISRRLQEMAFLNKGLTIILRDERVQDADVEADAEGHVAAVKERRFHYPGGLED 240
Query: 306 YVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 364
+V+ +N ++ +H+ V+ F + + +++A+QW + Y+ ++ +AN+I T +GGTH E
Sbjct: 241 FVRHINHTREAVHEKVISFEAKGEDLEVEVAMQWNT-GYTPSVYTFANTINTHEGGTHEE 299
Query: 365 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 424
G +A+LTR +N ++ K +K+KD +L+G+ +REGL IISV++ P+FEGQTKT+LGN
Sbjct: 300 GFRAALTRVVNEYAREKKLLKEKDTNLTGDDIREGLAAIISVKLKEPQFEGQTKTKLGNS 359
Query: 425 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 484
E + V +S E+L ++ E HP+ +I++K++S+ +A +AA++AR+LVR+K L L
Sbjct: 360 EAKSFVQKSANEHLADWFERHPNETKTIVTKAVSSAQARIAARKARELVRRKGALDIGGL 419
Query: 485 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PGKL DC ST PEE E+++VEGDSAGGSAK+GRD FQ I+ P++ I A
Sbjct: 420 PGKLKDCRSTNPEECELYVVEGDSAGGSAKEGRDSMFQAIL-PIRGKIINVEKA 472
>gi|298675298|ref|YP_003727048.1| DNA gyrase subunit B [Methanohalobium evestigatum Z-7303]
gi|298288286|gb|ADI74252.1| DNA gyrase, B subunit [Methanohalobium evestigatum Z-7303]
Length = 634
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/465 (50%), Positives = 327/465 (70%), Gaps = 13/465 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y S IQVLEGLEAVRKRP+MYIGS RGLHHLVYE++DN++DEA AGY S I L
Sbjct: 5 QVYDSTNIQVLEGLEAVRKRPSMYIGSVDSRGLHHLVYEVVDNSIDEALAGYCSEINTIL 64
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
+D SV++ D+GRGIP+D H NKSALE V+T+LHAGGKF +S Y VSGGLHGVG+S
Sbjct: 65 NSDGSVTLEDDGRGIPVDTHAKYNKSALEVVMTLLHAGGKFDKNS--YKVSGGLHGVGVS 122
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVN LSE L+V V RD Y+Q Y +G P T + + + GT+ F PD ++F
Sbjct: 123 VVNGLSEWLDVEVKRDDKRYYQHYEKGYPKTEVQV----LGESEGNGTKFTFKPDSEIFE 178
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
+ +FD+++++ R+RELAFLN + I ++ E S E+ Q + + + GG+ +V+ LN ++
Sbjct: 179 ST-EFDYDSLSTRLRELAFLNKGIKITIKDERS--EEGQEDVFQYDGGIVSFVKHLNKNR 235
Query: 315 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
P+H+ + F + DG ++++LQ+ +D+Y + + +AN+I T +GGTH+ G K +LTR
Sbjct: 236 SPIHEEPIYFEGESDGTIVEISLQY-TDSYGEYVYSFANNINTHEGGTHVIGFKTALTRV 294
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
N +K++ ++ ++ L+GE +REGLT IIS ++P+P+FEGQTKTRLGN +V+ VV+
Sbjct: 295 ANDYIRKNE-IEKGNVRLTGEDIREGLTAIISAKIPDPQFEGQTKTRLGNSDVKGVVESL 353
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
V E L+ YLE +P + +SI+ K+LSA +A AAKRAR+L R+KS L S+LPGKLADCS
Sbjct: 354 VTEELSRYLEENPKIANSIIKKALSAKRAREAAKRARELTRRKSALEVSTLPGKLADCSE 413
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
T P SEIF+VEGDSAGGSAK GRDRRFQ I+ P + I A
Sbjct: 414 TDPSVSEIFLVEGDSAGGSAKMGRDRRFQAIL-PFRGKIINVEKA 457
>gi|189485008|ref|YP_001955949.1| DNA gyrase subunit B [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|170286967|dbj|BAG13488.1| DNA gyrase subunit B [uncultured Termite group 1 bacterium
phylotype Rs-D17]
Length = 830
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/461 (50%), Positives = 333/461 (72%), Gaps = 16/461 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQ+LEGLEAVRKRPAMYIGSTG +GLHHLVYE++DN++DE AGY NI+V + +
Sbjct: 16 YSASNIQILEGLEAVRKRPAMYIGSTGSQGLHHLVYEVVDNSIDEVLAGYCKNIDVTVHS 75
Query: 137 DNSVSVADNGRGIPIDLHPA---TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
DNS++V D+GRGIP+D HP SALE VLT LHAGGKF +S Y VSGGLHGVG+
Sbjct: 76 DNSITVLDDGRGIPVDPHPDPKFKGVSALEIVLTKLHAGGKFDKNS--YKVSGGLHGVGV 133
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
S VNALS+ L+ V+R+G Y Q YS+GKP+ C V + +GT++ F PD ++F
Sbjct: 134 SCVNALSDLLKAEVYRNGKVYVQNYSKGKPL----CPVKESGVTEERGTKVTFHPDPEIF 189
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
+ +++ +T+A R+RELAFLN I + E D +++ ++ + GG++ +VQ+LNT+
Sbjct: 190 S-VMKYSFDTLANRLRELAFLNAGTRIRISDERDDDKEHIFD---YNGGIKTFVQYLNTN 245
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K ++ D + F K+ D + +++A+Q+ +D+Y++ + + N+I T++GGTH+ G +++LTR
Sbjct: 246 KNVINKDPIYFVKEKDDVYVEIAMQY-NDSYNELIFTFVNNINTVEGGTHLSGFRSALTR 304
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
++N KK++ K KD+ LSGE VREGLT IIS++V +P+FEGQTKTRLGN EV ++
Sbjct: 305 SVNEYIKKNEVSKIKDLKLSGEDVREGLTAIISIKVQDPQFEGQTKTRLGNSEVEGIMQS 364
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
V + LT +LE +P + IL K+++A +A AA++AR+L R+K L S+SLPGKLADCS
Sbjct: 365 VVGDALTTFLEENPGIASQILDKAINAAEAREAARKARELTRRKGALDSASLPGKLADCS 424
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P+++E+FIVEGDSAGGSAKQGRDR FQ I+ PL+ I
Sbjct: 425 ERDPQKTELFIVEGDSAGGSAKQGRDRSFQAIL-PLKGKIL 464
>gi|383752835|ref|YP_005431738.1| putative DNA gyrase subunit B [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381364887|dbj|BAL81715.1| putative DNA gyrase subunit B [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 672
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 238/467 (50%), Positives = 323/467 (69%), Gaps = 13/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQ+LEGLEAVR RP MYIGST RGLHHLVYE++DN++DEA AGY I+V
Sbjct: 41 VDADYGAEQIQILEGLEAVRMRPGMYIGSTSERGLHHLVYEVVDNSIDEALAGYCDKIDV 100
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V DNGRGIP+D+H + A+E VLTVLHAGGKFGG GY VSGGLHGVG
Sbjct: 101 TIHRDNSITVTDNGRGIPVDMHE-SGMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVG 157
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS S+EV V RDG + + RG+ V L HV + GTR+ F PD ++
Sbjct: 158 VSVVNALSTSMEVQVKRDGKIHEISFKRGETVEKL--HV--TGETEITGTRVHFVPDPEI 213
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F+ + ++T+ R+RELAFLN +TI L E + +++ ++ F GG+ +V+ LN
Sbjct: 214 FSVTT-YSYDTLKHRLRELAFLNHGITIVLNDERGEELRSE--QFHFEGGISSFVEHLNR 270
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
K+ ++ + + F D +++ALQ+ +D+Y + + + N+I T +GGTH+ G K +LT
Sbjct: 271 KKEKINPEPIYFNGTKDDTVVEIALQY-NDSYQENIYSFVNNINTEEGGTHLAGFKLALT 329
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R N +K +KDKD +LSG+ VREGLT +IS++V +P+FEGQTKT+LGN EVR +VD
Sbjct: 330 RAANDFARKQNILKDKDGNLSGDDVREGLTAVISLKVRDPQFEGQTKTKLGNSEVRGIVD 389
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E L+EY E +P + + K++ A +A AA++AR+L R+K+ L SSLPGKLADC
Sbjct: 390 SIVTEGLSEYFEENPTITKKFIEKAIMAARAREAARKARELTRRKNALEVSSLPGKLADC 449
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PE +EI++VEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 450 SVKDPEMAEIYLVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNVEKA 495
>gi|116754690|ref|YP_843808.1| DNA gyrase, B subunit [Methanosaeta thermophila PT]
gi|116666141|gb|ABK15168.1| DNA gyrase subunit B [Methanosaeta thermophila PT]
Length = 628
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/463 (48%), Positives = 321/463 (69%), Gaps = 15/463 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + I+V+EGLEAVR RP+MYIGST GLHHLVYE++DN+VDEA AGY I V +
Sbjct: 6 YDASHIKVMEGLEAVRHRPSMYIGSTDVHGLHHLVYEVVDNSVDEAMAGYCKEISVVIHG 65
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSV D+GRGIP+D+HP N+ A+E V+TVLHAGGKF + Y VSGGLHGVG+SVV
Sbjct: 66 DGSVSVKDDGRGIPVDIHPQYNRPAVEIVMTVLHAGGKFDHDT--YHVSGGLHGVGVSVV 123
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LEV V R+G Y Q+Y RG+PV+ L + GT +RF PD ++F
Sbjct: 124 NALSEWLEVEVSREGRVYRQRYERGRPVSDLQ----ETGVSENTGTTVRFKPDPEIFEVT 179
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
F + ++ R+RELAFLN L I++ E S K + + GG+ +VQ+LN K+
Sbjct: 180 -DFSFDVLSSRLRELAFLNRGLKISITDERSGRSKT----FHYDGGIISFVQYLNKSKEV 234
Query: 317 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LH + + F + D +++++A+Q+ + +Y++++ +AN+I T +GGTH+ G +A+LT+T+N
Sbjct: 235 LHPNPIYFSRVRDDVSVEVAMQYNT-SYNESVFTFANNINTREGGTHLSGFRAALTKTVN 293
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
++ K +K D L+G+ +REGL ++SVR+P+P+FEGQTKTRLGN VR +V+ V
Sbjct: 294 DFVREKKLLKG-DAKLTGDDLREGLVAVVSVRLPDPQFEGQTKTRLGNSAVRGLVESLVS 352
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L EY EL+P V ++I+ K+ A++A AA++A+++ R+K+ L SS LPGKLADC
Sbjct: 353 EGLMEYFELNPQVAEAIVEKATEAMRAREAARKAKEITRRKTALTSSGLPGKLADCVERD 412
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P +SE++IVEG+SAGGSAKQGR+R FQ ++ PL+ I A
Sbjct: 413 PAKSELYIVEGESAGGSAKQGRNRHFQAVL-PLRGKILNVERA 454
>gi|23978243|dbj|BAC21115.1| DNA gyrase B subunit [Pseudanabaena sp. PCC 7367]
Length = 392
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/398 (56%), Positives = 293/398 (73%), Gaps = 7/398 (1%)
Query: 102 TGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSA 161
TGP+GLHHLVYE++DN+VDEA GY I V LLAD SV+V DNGRGIP D+HP T KSA
Sbjct: 1 TGPKGLHHLVYEVVDNSVDEALGGYCDTILVELLADGSVAVTDNGRGIPTDVHPRTGKSA 60
Query: 162 LETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG 221
LETV+TVLHAGGKF G+S Y VSGGLHGVG+SVVNALSE +EV+VWR G + Q+Y RG
Sbjct: 61 LETVMTVLHAGGKFDGNS--YKVSGGLHGVGVSVVNALSEWVEVSVWRQGKLHQQRYERG 118
Query: 222 KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIA 281
P+ L V K ++GT++ F PD +F T I+F+ + + GR+RELA+LN L I
Sbjct: 119 IPIGNL--EVSTAKDKQKRGTKVCFMPDTMIFATGIEFEFDILVGRLRELAYLNAGLKIE 176
Query: 282 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCS 340
+ D E ++ Y + GG+ EYV ++ DK+ LH +++ + + + I I++A+QWC
Sbjct: 177 I--ADRRGETDKVETYQYDGGIREYVSYMTRDKEALHPEIIYIKGERNDIQIEVAMQWCI 234
Query: 341 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 400
D+YSD + G+AN+IRT+DGGTH+EG+K LTRT+NS +K K +KD D +L+GE+VREGL
Sbjct: 235 DSYSDNVFGFANNIRTVDGGTHLEGLKTVLTRTINSTARKLKKLKDSDSNLAGENVREGL 294
Query: 401 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 460
T +ISV+VP PEFEGQTKT+LGN EVR VD V E L E++E +P V +I+ K+L +
Sbjct: 295 TAVISVKVPEPEFEGQTKTKLGNTEVRGTVDSFVGEVLNEFIEFNPQVASTIIEKALQSY 354
Query: 461 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEE 498
AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P E
Sbjct: 355 NAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSE 392
>gi|448479248|ref|ZP_21604100.1| DNA gyrase subunit B [Halorubrum arcis JCM 13916]
gi|448506335|ref|ZP_21614445.1| DNA gyrase subunit B [Halorubrum distributum JCM 9100]
gi|448524821|ref|ZP_21619463.1| DNA gyrase subunit B [Halorubrum distributum JCM 10118]
gi|445699985|gb|ELZ52003.1| DNA gyrase subunit B [Halorubrum distributum JCM 9100]
gi|445700187|gb|ELZ52198.1| DNA gyrase subunit B [Halorubrum distributum JCM 10118]
gi|445822526|gb|EMA72290.1| DNA gyrase subunit B [Halorubrum arcis JCM 13916]
Length = 638
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/458 (50%), Positives = 320/458 (69%), Gaps = 10/458 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGL+AVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ IEV +
Sbjct: 7 YGAGQIQVLEGLQAVRKRPAMYIGSTDGRGLHHLVYEVVDNSIDEALAGHCEEIEVRIHD 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSV+D+GRGIP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVSDDGRGIPVDTHEEYDRPALEVILTVLHAGGKF--DSKSYQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LEV V RDG + +++ G+P V ++S + GT IRFWPD+++F T
Sbjct: 125 NALSELLEVEVKRDGGVFRHRFAGGEPAEDGFERVRDMESGESTGTEIRFWPDEEIFETT 184
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+F +T+A R+RELAFLN + I L + D E+ + + GG+ E+V +LN + P
Sbjct: 185 -EFQTSTLANRLRELAFLNSGVEIRLVDDRDDTEET----FKYDGGIREFVAYLNETRSP 239
Query: 317 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
+H+ V+ F + DG+ +++A+Q ++ ++ +AN+I T +GGTH+ G K +LTRT+N
Sbjct: 240 IHEEVIYFEDETDGVHVEVAMQ-ATEELQGSVHAFANNINTREGGTHLTGFKTALTRTVN 298
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+ V D D +L GE VREGLT ++SV+ P+P+FEGQTKT+LGN EVR VV+ +
Sbjct: 299 DYANEHGLVDDLDANLKGEDVREGLTAVVSVKHPDPQFEGQTKTKLGNSEVRGVVESATH 358
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L + E +PD + ++ K+ A +A AAK+A +L R+KS L S++LPGKLADC +
Sbjct: 359 EKLGTFFEENPDTAEKVVHKAAEAARARKAAKKAEELTRRKSALESTALPGKLADCQTRD 418
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P E+E+F+VEGDSAGGSAKQGR+R Q I+ PL+ I
Sbjct: 419 PTEAELFVVEGDSAGGSAKQGRNRENQAIL-PLKGKIL 455
>gi|148262089|ref|YP_001228795.1| DNA gyrase subunit B [Geobacter uraniireducens Rf4]
gi|146395589|gb|ABQ24222.1| DNA gyrase subunit B [Geobacter uraniireducens Rf4]
Length = 794
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/470 (49%), Positives = 324/470 (68%), Gaps = 14/470 (2%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
++ SK YG+++I+VLEGL AVRKRPAMYIGST +GLHHLVYEI+DN++DEA AG+ +
Sbjct: 3 DDTTSKDYGADKIKVLEGLSAVRKRPAMYIGSTSVQGLHHLVYEIVDNSIDEALAGHCDD 62
Query: 130 IEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 189
I V + D SV+V DNGRGIP D+HP KSA E VLTVLHAGGKF SS Y VSGGLH
Sbjct: 63 ILVTINVDGSVTVVDNGRGIPTDMHPTEGKSAAEVVLTVLHAGGKFDNSS--YKVSGGLH 120
Query: 190 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 249
GVG+SVVNALS+ LE+ + RDG + Q Y G P L V ++GT+I F+PD
Sbjct: 121 GVGVSVVNALSKKLELEIRRDGKLFRQSYRCGDPQGPLEV----VGETKKRGTKITFFPD 176
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 309
++F T +F +T++ R+RE+AFLN + I + E ++ + +E+F+ GG+ +V++
Sbjct: 177 DEIFETT-EFSFDTLSQRLREMAFLNAGVRIKIVDERTE----KVHEFFYEGGINSFVEY 231
Query: 310 LNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
LN +K P+H + + G+ +++A+Q+ +D+Y + + +AN+I T +GGTH+ G KA
Sbjct: 232 LNKNKTPIHPKPIYISGEKGGVEMEIAMQY-NDSYDEKIFTFANNINTHEGGTHLIGFKA 290
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
+LTRT+N+ + +K+ ++SGE +REGLT +ISV++P P+FEGQTKT+LGN EV+
Sbjct: 291 ALTRTMNTYANANNLLKNVKENISGEDLREGLTSVISVKIPQPQFEGQTKTKLGNSEVKG 350
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
V+ + E L YLE +P + IL KS+ A +A AA+RARDL R+K L +LPGKL
Sbjct: 351 YVETLMNEKLATYLEENPQIAKRILEKSIDAARAREAARRARDLTRRKGALEVGTLPGKL 410
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
ADC P E+F+VEGDSAGGSAKQGRDR++Q I+ PL+ I A
Sbjct: 411 ADCQEKDPALCELFLVEGDSAGGSAKQGRDRKYQAIL-PLKGKILNVEKA 459
>gi|423310102|ref|ZP_17288086.1| DNA gyrase, B subunit [Bacteroides uniformis CL03T12C37]
gi|392682742|gb|EIY76084.1| DNA gyrase, B subunit [Bacteroides uniformis CL03T12C37]
Length = 653
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/466 (48%), Positives = 321/466 (68%), Gaps = 12/466 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y +E IQVLEGLEAVRKRPAMYIG+ +GLHHLVYE++DN++DEA AGY +IEV +
Sbjct: 12 SYSAENIQVLEGLEAVRKRPAMYIGNISSKGLHHLVYEVVDNSIDEALAGYCDHIEVTIN 71
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+D H KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 72 EDNSITVQDNGRGIPVDYHEKEKKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 129
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS + V+R+G Y Q+YS G P+ + V V + D GTR +FWPD +FT
Sbjct: 130 VNALSTHMTTQVFRNGKIYQQEYSCGHPLYS----VKEVGTTDITGTRQQFWPDDTIFTE 185
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRK-EDSDPEKNQYNEYFFAG-GLEEYVQWLNTD 313
+ ++++ +A R+RELA+LN + I+L D E N E F++ GL+E+V+++++
Sbjct: 186 TV-YNYDILATRMRELAYLNAGIKISLTDLRVKDEEGNAKKEIFYSEEGLKEFVRYVDSS 244
Query: 314 KKP-LHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
++ ++DV+ + G +++A+ + + +Y++ + Y N+I TI+GGTH+ G + +LTR
Sbjct: 245 REHFMNDVIYINTEKQGTPVEVAIMYNT-SYNENVHSYVNNINTIEGGTHLAGFRRALTR 303
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
TL + +K ++ + ++G+ REGLT +IS++V P+FEGQTKT+LGN EV VDQ
Sbjct: 304 TLKKYAEDNKMLEKAKVEIAGDDFREGLTAVISIKVAEPQFEGQTKTKLGNNEVMGAVDQ 363
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+V E LT YLE HP I+ K + A +A +AA++AR+ V++KS + +PGKLADCS
Sbjct: 364 AVGEALTYYLEEHPKEAKLIVDKVILAAQARIAARKARESVQRKSPMSGGGMPGKLADCS 423
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PEE E+F+VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 424 SKDPEECELFLVEGDSAGGSAKQGRNRAFQAIL-PLRGKILNVEKA 468
>gi|302390804|ref|YP_003826624.1| DNA gyrase subunit B [Acetohalobium arabaticum DSM 5501]
gi|302202881|gb|ADL11559.1| DNA gyrase subunit B [Acetohalobium arabaticum DSM 5501]
Length = 639
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/463 (50%), Positives = 322/463 (69%), Gaps = 12/463 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++QIQVLEGLEAVRKRP MY+G TG RGLHHLVYE++DN++DEA AGY NIEV +
Sbjct: 11 YDADQIQVLEGLEAVRKRPGMYVGGTGARGLHHLVYEVVDNSIDEALAGYCDNIEVIIEP 70
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
N V+V D+GRGIPI HP NK A+E V+TVLHAGGKF + GY VSGGLHGVG+SVV
Sbjct: 71 GNVVTVIDDGRGIPISSHPNLNKPAVEIVMTVLHAGGKF--DNEGYKVSGGLHGVGVSVV 128
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LEV V RD YHQ+Y G PV LT + GT I+F PD ++F +
Sbjct: 129 NALSEWLEVEVMRDNKIYHQRYEEGVPVKDLTV----IGESQASGTMIKFKPDLEIFES- 183
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
I F++ + R++ELA+LN + I ++ + D K +Y GG+ +VQ LN +K P
Sbjct: 184 IDFEYKKLIKRLKELAYLNKGIKIEIKDKRRDEIKTDIFQY--DGGIVSFVQELNENKDP 241
Query: 317 LHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
+H+ + F + + I++A+Q+ ++ Y D + +AN+I T +GG H+ G K++LTRT+N
Sbjct: 242 IHEEPIYFETEEEDNHIEVAIQY-NETYVDNIFTFANNINTHEGGNHLSGFKSALTRTIN 300
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
++ +K+ D +LSG+ +REG+ I++V++P+P+FEGQTKT+L N EVR +VD V
Sbjct: 301 DYARRHDYLKEDDSNLSGDDIREGIVAIVNVKLPDPQFEGQTKTKLANSEVRGIVDSVVS 360
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L +LE P++ I+ K++ A +A AAK+AR+L R+KS L S++LPGKLADCSS
Sbjct: 361 ENLDRFLEEDPEIGSIIVQKAIKAAEARKAAKKARELTRRKSALTSTALPGKLADCSSRD 420
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PEESE++IVEGDSAGGSAKQGRDR+FQ I+ PL+ I A
Sbjct: 421 PEESELYIVEGDSAGGSAKQGRDRKFQAIL-PLKGKILNVEKA 462
>gi|302344968|ref|YP_003813321.1| DNA gyrase, B subunit [Prevotella melaninogenica ATCC 25845]
gi|302149978|gb|ADK96240.1| DNA gyrase, B subunit [Prevotella melaninogenica ATCC 25845]
Length = 657
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/472 (49%), Positives = 322/472 (68%), Gaps = 17/472 (3%)
Query: 70 ENPVSKT-YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
ENP ++ Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY
Sbjct: 3 ENPENENNYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCQ 62
Query: 129 NIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 188
NIEV + DNS++V D+GRGIP+D+H +KSALE V+TVLHAGGKF S Y VSGGL
Sbjct: 63 NIEVTINEDNSITVEDDGRGIPVDMHEKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGL 120
Query: 189 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 248
HGVG+S VNALS ++ V+RDG Y Q+Y +GKP+ + V D+ GTR +FWP
Sbjct: 121 HGVGVSCVNALSTHMKSQVFRDGKIYQQEYEKGKPLYPVKV----VGETDKTGTRQQFWP 176
Query: 249 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY-NEYFFA-GGLEEY 306
D ++FTT + + +A R+RELA+LN + I L DPE + E F A GL+E+
Sbjct: 177 DPEIFTTTV-YQWAIVARRMRELAYLNAGIKITLSDLRPDPETGKTRTEVFHAKDGLKEF 235
Query: 307 VQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 365
V++++ ++ L DV+ + + I I++A+ + +D Y++ + Y N+I TI+GGTH++G
Sbjct: 236 VRYVDRHRQHLFDDVIYLKTEKQNIPIEVAVMYNTD-YTENIHSYVNNINTIEGGTHLQG 294
Query: 366 VKASLTRTLNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 421
+A+LTRTL + SK ++ I ++GE REGLT +IS++V P+FEGQTKT+L
Sbjct: 295 FRAALTRTLKTYADNDPQISKQLEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTKL 354
Query: 422 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 481
GN EV V Q+V E LT+YLE HP+ I +K + A A +AA++AR+ V++K+V+
Sbjct: 355 GNSEVSGAVQQAVGEALTDYLEEHPNEAKMICNKVILAATARVAARKARESVQRKNVMSG 414
Query: 482 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LPGKLADCS+ P++ EIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 415 GGLPGKLADCSNKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAIL-PLRGKIL 465
>gi|299143458|ref|ZP_07036538.1| DNA gyrase, B subunit [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298517943|gb|EFI41682.1| DNA gyrase, B subunit [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 639
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 237/474 (50%), Positives = 330/474 (69%), Gaps = 17/474 (3%)
Query: 68 FKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYA 127
KEN ++ YG+E IQVL GLE VRKRP MYIGSTG +GLHHLVYE++DN++DEA AG
Sbjct: 1 MKENK-NRQYGAEDIQVLTGLEPVRKRPGMYIGSTGSKGLHHLVYEVVDNSIDEALAGIC 59
Query: 128 SNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGG 187
+I V + DNSVSV+DNG GIP ++HP T KS +ETVLT+LHAGGKF ++ Y VSGG
Sbjct: 60 DHILVEIYEDNSVSVSDNGSGIPTEIHPQTGKSTVETVLTILHAGGKF--NNGAYKVSGG 117
Query: 188 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDS--KDRQGTRIR 245
LHGVG+SVVNALS L V V R+G Y QK+SRG T L + V+ K+ GT+I
Sbjct: 118 LHGVGVSVVNALSTELIVNVKRNGNIYEQKFSRGIAKTQL----IEVEKLKKEETGTKIF 173
Query: 246 FWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEE 305
F PD ++F T ++F+ ++ R RE+AFLN + I D + Y + GG++
Sbjct: 174 FRPDPEIFDT-VEFEFEILSKRFREMAFLNKGIKIQF----IDHRIGKDETYHYEGGIKS 228
Query: 306 YVQWLNTDKKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 364
+V+++N K +H + + ++ + +++ALQ+ +D+Y++ +L +AN+I T +GG+H+
Sbjct: 229 FVEYINRKKTAIHKEIIYIDEIRENTAVEIALQY-TDSYTENILTFANNINTEEGGSHLS 287
Query: 365 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 424
G +++LTR +N G+K +K+K+ +LSGE VREGLT +ISV++PNP+FEGQTK +LGN
Sbjct: 288 GFRSALTRCINDYGRKYNIIKEKEENLSGEDVREGLTGVISVKLPNPQFEGQTKAKLGNS 347
Query: 425 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 484
E R +VD SV E L+ +LE +P V +IL KSLSA +A AA++ARDL R+K++L S +L
Sbjct: 348 ETRGIVDSSVSENLSSFLEENPKVAKTILEKSLSARRAREAARKARDLTRKKNILESMTL 407
Query: 485 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PGKLADC ++ E +EIF+VEGDSAGGSAK RD FQ I+ PL+ I A
Sbjct: 408 PGKLADCQNSDNETTEIFLVEGDSAGGSAKDARDSVFQAIL-PLRGKIMNVEKA 460
>gi|23978237|dbj|BAC21113.1| DNA gyrase B subunit [Synechococcus leopoliensis]
gi|31071469|dbj|BAC76783.1| DNA gyrase B subunit [Synechococcus sp. PCC 7942]
Length = 396
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/401 (58%), Positives = 297/401 (74%), Gaps = 9/401 (2%)
Query: 102 TGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSA 161
TGP+GLHHLVYE++DNAVDEA AGY + I+V LL D S V DNGRGIP D+HP T KSA
Sbjct: 1 TGPKGLHHLVYEVVDNAVDEALAGYCNTIDVRLLEDGSCQVTDNGRGIPTDIHPQTGKSA 60
Query: 162 LETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG 221
LETVLT+LHAGGKFGG S LHGVG+SVVNALSE +EVTVWR+G + Q++ +G
Sbjct: 61 LETVLTILHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEYVEVTVWREGKTHQQRFEQG 118
Query: 222 KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIA 281
P+ L V P D+ DR+GT++RF PD +F+ +FD+ T+A R++ELA+LN + I
Sbjct: 119 NPIGEL--QVAP-DADDRRGTQVRFKPDATIFSETTEFDYGTLASRLKELAYLNAGVRID 175
Query: 282 LRKEDSDPEKNQ---YNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQ 337
E KN Y+F GG+ EYV ++NTDK+ LH +++ + + DG+ ++ ALQ
Sbjct: 176 FTDERLQLTKNHEPHQETYYFEGGIREYVAYMNTDKQALHSEIIFVQSEKDGVQVEAALQ 235
Query: 338 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 397
WC DAYSD +LG+AN+IRTIDGGTHIEG+K LTRT+N++ +K KD D +LSGE++R
Sbjct: 236 WCVDAYSDNILGFANNIRTIDGGTHIEGLKTVLTRTMNTIARKRNKRKDADNNLSGENIR 295
Query: 398 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 457
EGLT I+SV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE HP V D IL K++
Sbjct: 296 EGLTAIVSVKVPDPEFEGQTKTKLGNTEVRGIVDTLVGETLTEYLEFHPSVADLILEKAI 355
Query: 458 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEE 498
A AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P E
Sbjct: 356 QAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPGE 396
>gi|418324495|ref|ZP_12935732.1| DNA gyrase, B subunit [Staphylococcus pettenkoferi VCU012]
gi|365225912|gb|EHM67148.1| DNA gyrase, B subunit [Staphylococcus pettenkoferi VCU012]
Length = 642
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 244/461 (52%), Positives = 314/461 (68%), Gaps = 8/461 (1%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ YG+ QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGYA IEV
Sbjct: 7 TENYGAGQIQVLEGLEAVRKRPGMYIGSTSEKGLHHLVWEIVDNSIDEALAGYADTIEVI 66
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + + DNGRGIP+D + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 67 IEKDNWIRITDNGRGIPVDTQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 124
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE LEV V RD YHQ Y RG P V+ D GT IRF D ++F
Sbjct: 125 SVVNALSERLEVYVHRDNKIYHQAYERGVP--QFDLEVVGETDDDNTGTEIRFKADPEIF 182
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +D+ T+ RI+ELAFLN ++I LR E + E + N Y + GG++ YV+ LN +
Sbjct: 183 TETTVYDYETLQQRIKELAFLNKGISITLRDERDEDEVREDN-YHYEGGIKSYVEMLNEN 241
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+PLHD + + D I +++ALQ+ S ++ +L YAN+I T +GGTH EG K +L+R
Sbjct: 242 KEPLHDEPIYIHQTKDDIEVEIALQYNS-GFATNLLTYANNIHTYEGGTHEEGFKRALSR 300
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G +SK +KD LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR++VD+
Sbjct: 301 ILNSYGLQSKIIKDDKDKLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQIVDK 360
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+L HP V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 361 LFSAQFERFLYEHPQVGRVIVDKGIMASRARVAAKKAREVTRRKSALEVSSLPGKLADCS 420
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
S P+ESEIFIVEGDSAGGS K+GRD Q I+ PL+ I
Sbjct: 421 SKNPDESEIFIVEGDSAGGSTKEGRDSATQAIL-PLRGKIL 460
>gi|296127762|ref|YP_003635014.1| DNA gyrase subunit B [Brachyspira murdochii DSM 12563]
gi|296019578|gb|ADG72815.1| DNA gyrase, B subunit [Brachyspira murdochii DSM 12563]
Length = 637
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/465 (49%), Positives = 304/465 (65%), Gaps = 12/465 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
KTY S+ IQVLEGL+ VRKRP MYIGSTG +GLHHLVYE++DN++DEA AGY NI V +
Sbjct: 6 KTYSSKNIQVLEGLDPVRKRPGMYIGSTGAQGLHHLVYEVVDNSIDEAMAGYCKNITVTI 65
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DN + V D+GRGIP+D+HP SALE V+T LHAGGKF + Y VSGGLHGVG+S
Sbjct: 66 EKDNIIKVEDDGRGIPVDMHPKLKISALEVVMTKLHAGGKFDNET--YKVSGGLHGVGVS 123
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS L V +DG Y Q Y RG P V V + + GT + F D +F
Sbjct: 124 VVNALSTELIAEVRKDGKLYRQVYHRGVPEEP----VKEVGTSTKNGTTVIFKADADIFE 179
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
T + +D+ +A R+RELAFLN + I L D + NE+++ GG+E ++ LN +K
Sbjct: 180 TTV-YDYKILANRLRELAFLNRGIRITL--TDKREAETVSNEFYYEGGIEMFITHLNENK 236
Query: 315 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
K LHD + K D +++A+Q+ DAY++ + Y N+I T +GGTH+ G + +LTR
Sbjct: 237 KALHDKPIYLHKTEDKTDVEVAMQYV-DAYNENIFTYCNNINTTEGGTHLVGFRTALTRV 295
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
KK + K I+ GE REGL ++SV++PNP+FEGQTKT+LGN EVR V ++
Sbjct: 296 YTDFAKKLELDKKNKITFMGEDTREGLVAVVSVKIPNPQFEGQTKTKLGNTEVRAVTEKL 355
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
V E L +Y +P V+ +IL K +SA A AA++ARDL R+K+ L S SLPGKLADCS
Sbjct: 356 VVEGLNDYFSQNPKVIKAILEKIISAANAREAARKARDLARRKNALESDSLPGKLADCSE 415
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
++ E+++VEGDSAGG+AK GRDR FQ I+ PL+ + A
Sbjct: 416 QEVDKCEVYLVEGDSAGGTAKGGRDRHFQAIL-PLRGKVLNVEKA 459
>gi|238926604|ref|ZP_04658364.1| DNA gyrase subunit B [Selenomonas flueggei ATCC 43531]
gi|238885550|gb|EEQ49188.1| DNA gyrase subunit B [Selenomonas flueggei ATCC 43531]
Length = 685
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 244/468 (52%), Positives = 320/468 (68%), Gaps = 15/468 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLVYE++DN++DEA AGY + V
Sbjct: 54 VDADYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVYEVVDNSIDEALAGYCDTVGV 113
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V DNGRGIP+D+H + A+E VLTVLHAGGKFGG GY VSGGLHGVG
Sbjct: 114 TIHKDNSITVTDNGRGIPVDMHES-GMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVG 170
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS ++V V RDG + +SRG VTT H + + D GTR+ F PD ++
Sbjct: 171 VSVVNALSTEMDVEVRRDGKIFAISFSRG--VTTTKLH--EIGTSDTTGTRVHFVPDPEI 226
Query: 253 FT-TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLN 311
FT T FD T+ R+RELAFLN +TI L E +++ + F GG+ +V LN
Sbjct: 227 FTVTTYSFD--TLKHRLRELAFLNHGITITLTDERGAEVRSE--TFHFDGGIRSFVSHLN 282
Query: 312 TDKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 370
K+ +++ + F D +++A+Q+ +D+Y + + + N+I T +GGTH+ G K +L
Sbjct: 283 RKKETINEEPIYFNGVKDDTVVEIAMQY-NDSYQENIYSFVNNINTEEGGTHLAGFKIAL 341
Query: 371 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
TR N ++ +K+KD +LSGE VREGLT +IS++V P+FEGQTKT+LGN EVR +V
Sbjct: 342 TRAANDFARRLNVLKEKDGNLSGEDVREGLTAVISLKVREPQFEGQTKTKLGNSEVRGIV 401
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
D V E LTEY E +P V +L K+L A +A AA++AR+L R+K+ L SSLPGKLAD
Sbjct: 402 DSIVTEGLTEYFEENPAVTKKVLDKALMASRAREAARKARELTRRKNALEVSSLPGKLAD 461
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
CS P++ EI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 462 CSVKDPDQCEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNVEKA 508
>gi|410477580|ref|YP_006765217.1| type IIA topoisomerase, B subunit [Leptospirillum ferriphilum
ML-04]
gi|424868392|ref|ZP_18292137.1| DNA gyrase, B subunit [Leptospirillum sp. Group II 'C75']
gi|124516516|gb|EAY58024.1| DNA gyrase, B subunit [Leptospirillum rubarum]
gi|206603407|gb|EDZ39887.1| DNA gyrase, B subunit [Leptospirillum sp. Group II '5-way CG']
gi|387221302|gb|EIJ75879.1| DNA gyrase, B subunit [Leptospirillum sp. Group II 'C75']
gi|406772832|gb|AFS52257.1| type IIA topoisomerase, B subunit [Leptospirillum ferriphilum
ML-04]
Length = 818
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/463 (50%), Positives = 317/463 (68%), Gaps = 15/463 (3%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
PV + Y +E I+VLEGLEAVR RP MYIGSTG GLHHLVYE++DN+VDEA AG+ S I
Sbjct: 6 PVEEEYTAEHIRVLEGLEAVRVRPGMYIGSTGIDGLHHLVYELVDNSVDEALAGHCSEIH 65
Query: 132 VALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 191
+ + D SV+VADNGRGIP +H +SA E VLTVLHAGGKF +++ Y VSGGLHGV
Sbjct: 66 ITIHPDRSVTVADNGRGIPTGMHAEQKRSAAEVVLTVLHAGGKF--NNNLYKVSGGLHGV 123
Query: 192 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 251
G+SVVNALSE+L + + ++G+ + Q Y +G P L ++GT IRFWPD
Sbjct: 124 GVSVVNALSETLFLEIHQNGLIHRQTYHKGTPDAPLAV----FGETTQRGTIIRFWPDMT 179
Query: 252 VFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLN 311
+ T QF +T+A R RELAFLNP LTI L+ E++ E+ + F GG++ +V +LN
Sbjct: 180 IMETD-QFSFDTLAHRFRELAFLNPVLTIHLKDEETLREET----FHFEGGVQSFVSFLN 234
Query: 312 TDKKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 370
+KK LHDV+ FRK + DG ++A Q+ ++T+LG+AN+I T +GGTH+ G + ++
Sbjct: 235 ENKKTLHDVLFFRKTLEDGSQFEVAFQYQESTENETVLGFANNIHTREGGTHVRGFRTAI 294
Query: 371 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
T+T+N ++ + K +++ GE VREGLT IISVR+P P+FEGQTK +LG+ V +
Sbjct: 295 TKTINRFIREKQLNKGEEVR--GEDVREGLTGIISVRIPGPQFEGQTKAKLGSSWVAGAM 352
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
+ + E L E E P I K++ +A AA++A+DL ++K+VL S+LPGKLAD
Sbjct: 353 ESFLSEALQEKFEEDPLTAKKIAEKAVLTAQAREAARKAKDLAKRKNVLEGSNLPGKLAD 412
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
C + P +SE++IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 413 CQESDPAKSELYIVEGDSAGGSAKQGRDRRFQAIL-PLKGKIL 454
>gi|160891431|ref|ZP_02072434.1| hypothetical protein BACUNI_03882 [Bacteroides uniformis ATCC 8492]
gi|270295441|ref|ZP_06201642.1| DNA gyrase, B subunit [Bacteroides sp. D20]
gi|423304784|ref|ZP_17282783.1| DNA gyrase, B subunit [Bacteroides uniformis CL03T00C23]
gi|156858838|gb|EDO52269.1| DNA gyrase, B subunit [Bacteroides uniformis ATCC 8492]
gi|270274688|gb|EFA20549.1| DNA gyrase, B subunit [Bacteroides sp. D20]
gi|392683448|gb|EIY76783.1| DNA gyrase, B subunit [Bacteroides uniformis CL03T00C23]
Length = 653
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/466 (48%), Positives = 320/466 (68%), Gaps = 12/466 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y +E IQVLEGLEAVRKRPAMYIG +GLHHLVYE++DN++DEA AGY +IEV +
Sbjct: 12 SYSAENIQVLEGLEAVRKRPAMYIGDISSKGLHHLVYEVVDNSIDEALAGYCDHIEVTIN 71
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+D H KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 72 EDNSITVQDNGRGIPVDYHEKEKKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 129
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS + V+R+G Y Q+YS G P+ + V V + D GTR +FWPD +FT
Sbjct: 130 VNALSTHMTTQVFRNGKIYQQEYSCGHPLYS----VKEVGTTDITGTRQQFWPDDTIFTE 185
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRK-EDSDPEKNQYNEYFFAG-GLEEYVQWLNTD 313
+ ++++ +A R+RELA+LN + I+L D E N E F++ GL+E+V+++++
Sbjct: 186 TV-YNYDILATRMRELAYLNAGIKISLTDLRVKDEEGNAKKEIFYSEEGLKEFVRYVDSS 244
Query: 314 KKP-LHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
++ ++DV+ + G +++A+ + + +Y++ + Y N+I TI+GGTH+ G + +LTR
Sbjct: 245 REHFMNDVIYINTEKQGTPVEVAIMYNT-SYNENVHSYVNNINTIEGGTHLAGFRRALTR 303
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
TL + +K ++ + ++G+ REGLT +IS++V P+FEGQTKT+LGN EV VDQ
Sbjct: 304 TLKKYAEDNKMLEKAKVEIAGDDFREGLTAVISIKVAEPQFEGQTKTKLGNNEVMGAVDQ 363
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+V E LT YLE HP I+ K + A +A +AA++AR+ V++KS + +PGKLADCS
Sbjct: 364 AVGEALTYYLEEHPKEAKLIVDKVILAAQARIAARKARESVQRKSPMSGGGMPGKLADCS 423
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PEE E+F+VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 424 SKDPEECELFLVEGDSAGGSAKQGRNRAFQAIL-PLRGKILNVEKA 468
>gi|206603337|gb|EDZ39817.1| DNA gyrase, B subunit [Leptospirillum sp. Group II '5-way CG']
Length = 818
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/464 (50%), Positives = 318/464 (68%), Gaps = 15/464 (3%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
PV + Y +E I+VLEGLEAVR RP MYIGSTG GLHHLVYE++DN+VDEA AG+ S I
Sbjct: 5 EPVEEEYTAEHIRVLEGLEAVRVRPGMYIGSTGIDGLHHLVYELVDNSVDEALAGHCSEI 64
Query: 131 EVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 190
V + D SV+VADNGRGIP +H +SA E VLTVLHAGGKF +++ Y VSGGLHG
Sbjct: 65 HVTIHPDRSVTVADNGRGIPTGMHAEQKRSAAEVVLTVLHAGGKF--NNNLYKVSGGLHG 122
Query: 191 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 250
VG+SVVNALSE+L + + ++G+ + Q Y +G P L ++GT IRFWPD
Sbjct: 123 VGVSVVNALSETLFLEIHQNGLIHRQTYHKGAPDAPLAV----FGETAQRGTIIRFWPDM 178
Query: 251 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWL 310
+ T QF +T++ R RELAFLNP LTI L++E++ E+ + F GG++ +V +L
Sbjct: 179 TIMETD-QFSFDTLSHRFRELAFLNPVLTIHLKEEETLREET----FHFEGGVQSFVSFL 233
Query: 311 NTDKKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
N +KK LHDV+ FRK + DG ++A Q+ ++T+LG+AN+I T +GGTH+ G + +
Sbjct: 234 NENKKTLHDVLFFRKTLEDGSQFEVAFQYQESTENETVLGFANNIHTREGGTHVRGFRTA 293
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
+T+T+N ++ + K +++ GE VREGLT IISVR+P P+FEGQTK +LG+ V
Sbjct: 294 ITKTINRFIREKQLNKGEEVR--GEDVREGLTGIISVRIPGPQFEGQTKAKLGSSWVAGA 351
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
++ + E L E E P I K++ +A AA++A+DL ++K+VL S+LPGKLA
Sbjct: 352 MESFLSEALQEKFEEDPLTAKKIAEKAVLTAQAREAARKAKDLAKRKNVLEGSNLPGKLA 411
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
DC + P +SE++IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 412 DCQESDPAKSELYIVEGDSAGGSAKQGRDRRFQAIL-PLKGKIL 454
>gi|160941457|ref|ZP_02088792.1| hypothetical protein CLOBOL_06348 [Clostridium bolteae ATCC
BAA-613]
gi|158435603|gb|EDP13370.1| hypothetical protein CLOBOL_06348 [Clostridium bolteae ATCC
BAA-613]
Length = 637
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/467 (50%), Positives = 322/467 (68%), Gaps = 11/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG++QIQ+LEGLEAVRKRP MYIGST RGLHHLVYEI+DNAVDEA AGY +I+V
Sbjct: 1 MGEQYGADQIQILEGLEAVRKRPGMYIGSTSARGLHHLVYEIVDNAVDEALAGYCDSIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V D+GRGIP+D+ A+E V T+LHAGGKFG + GY VSGGLHGVG
Sbjct: 61 TINEDNSITVMDDGRGIPVDIQKKAGLPAVEVVFTILHAGGKFG--NGGYKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
SVVNALSE LEV V++DG Y Q+Y RGK T ++ ++ GTR+ F PDK++
Sbjct: 119 ASVVNALSEWLEVQVYKDGNIYQQRYERGK--VTYPLKIVGKCGPEQHGTRVTFLPDKEI 176
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F + +D++T+ R+RE AFL L I L K+D D +K + + + GG++E+V +LN
Sbjct: 177 FEETV-YDYDTLKIRLRETAFLTKNLKIIL-KDDRDEKKEKV--FHYEGGIKEFVTYLNK 232
Query: 313 DKKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
K P++D V + + +G+ +++++Q +D+Y++ + + N+I T +GGTH+ G K +LT
Sbjct: 233 GKTPIYDQVIYCEGTREGVYVEVSMQH-NDSYTENIYTFVNNINTPEGGTHLTGFKNALT 291
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
+T N ++ K +KD + +LSGE +REGLT IISV++ +P+FEGQTK +LGN E R VD
Sbjct: 292 KTFNDYAREKKLLKDSEDNLSGEDIREGLTAIISVKIEDPQFEGQTKQKLGNSEARAAVD 351
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E LT +LE +P V S+ KS+ A +A AA++ARDL R+KS L +LPGKLADC
Sbjct: 352 NIVSEQLTYFLEQNPAVAKSMCEKSILAQRARAAARKARDLTRRKSALDGMALPGKLADC 411
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PE EI+IVEGDSAGGSAK R R Q I+ PL+ I A
Sbjct: 412 SDKNPENCEIYIVEGDSAGGSAKTARSRATQAIL-PLRGKILNVEKA 457
>gi|225619544|ref|YP_002720801.1| D Gyrase B subunit [Brachyspira hyodysenteriae WA1]
gi|10644698|gb|AAG21374.1|AF288224_1 DNA Gyrase B subunit [Brachyspira hyodysenteriae]
gi|225214363|gb|ACN83097.1| D Gyrase B subunit [Brachyspira hyodysenteriae WA1]
Length = 636
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/465 (48%), Positives = 307/465 (66%), Gaps = 12/465 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
KTY S+ IQVLEGL+ VRKRP MYIGSTG +GLHHLVYE++DN++DEA AGY NI V +
Sbjct: 5 KTYSSKNIQVLEGLDPVRKRPGMYIGSTGAQGLHHLVYEVVDNSIDEAMAGYCKNITVTI 64
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
N + V D+GRGIP+D+HP SALE V+T LHAGGKF + Y VSGGLHGVG+S
Sbjct: 65 KKGNIIQVEDDGRGIPVDMHPKLKISALEVVMTKLHAGGKFDNET--YKVSGGLHGVGVS 122
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS L V +DG Y Q Y RG P V V + + GT + F D ++F
Sbjct: 123 VVNALSTELIAEVNKDGKLYRQVYHRGIPEEP----VKEVGTSKKTGTTVTFKADDEIFE 178
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
T + +D+ +A R+RELAFLN + I L+ D + NE+++ GG+E ++ LN +K
Sbjct: 179 TTV-YDYKILANRLRELAFLNRGIRITLK--DEREAEVVSNEFYYEGGIEMFITHLNENK 235
Query: 315 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
K LHD + K+ D +++A+Q+ DAY++ + Y N+I T +GGTH+ G + +LTR
Sbjct: 236 KALHDKPIYLHKNEDKTDVEVAMQYV-DAYNENIFTYCNNINTTEGGTHLVGFRTALTRV 294
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
KK + K I+ GE REGL ++SV++PNP+FEGQTKT+LGN EVR V ++
Sbjct: 295 YTDFAKKLELDKKNKITFMGEDTREGLVAVVSVKIPNPQFEGQTKTKLGNTEVRAVTEKL 354
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
V E L +Y +P V+ +IL K +SA +A AA++ARDL R+K+ L S SLPGKLADCS
Sbjct: 355 VVEGLNDYFSQNPKVIKAILEKIISAAQAREAARKARDLARRKNALESDSLPGKLADCSE 414
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
++ E+++VEGDSAGG+AK GRDR FQ I+ PL+ + A
Sbjct: 415 QEVDKCEVYLVEGDSAGGTAKGGRDRHFQAIL-PLRGKVLNVEKA 458
>gi|448424305|ref|ZP_21582355.1| DNA gyrase subunit B [Halorubrum terrestre JCM 10247]
gi|448448767|ref|ZP_21591352.1| DNA gyrase subunit B [Halorubrum litoreum JCM 13561]
gi|445682298|gb|ELZ34717.1| DNA gyrase subunit B [Halorubrum terrestre JCM 10247]
gi|445814241|gb|EMA64208.1| DNA gyrase subunit B [Halorubrum litoreum JCM 13561]
Length = 638
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/458 (50%), Positives = 320/458 (69%), Gaps = 10/458 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGL+AVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ IEV +
Sbjct: 7 YGAGQIQVLEGLQAVRKRPAMYIGSTDGRGLHHLVYEVVDNSIDEALAGHCEEIEVRIHD 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSV+D+GRGIP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVSDDGRGIPVDTHEEYDRPALEVILTVLHAGGKF--DSKSYQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LEV V RDG + +++ G+P V ++S + GT IRFWPD+++F T
Sbjct: 125 NALSELLEVEVKRDGGVFRHRFAGGEPAEDGFERVRDMESGESTGTEIRFWPDEEIFETT 184
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+F +T+A R+RELAFLN + I L + D E+ + + GG+ E+V +LN + P
Sbjct: 185 -EFQTSTLANRLRELAFLNSGVEIRLVDDRDDTEET----FKYDGGIREFVAYLNETRSP 239
Query: 317 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
+H+ V+ F + DG+ +++A+Q ++ ++ +AN+I T +GGTH+ G K +LTRT+N
Sbjct: 240 IHEEVIYFADETDGVHVEVAMQ-ATEELQGSVHAFANNINTREGGTHLTGFKTALTRTVN 298
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+ V D D +L GE VREGLT ++SV+ P+P+FEGQTKT+LGN EVR VV+ +
Sbjct: 299 DYANEHGLVDDLDANLKGEDVREGLTAVVSVKHPDPQFEGQTKTKLGNSEVRGVVESATH 358
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L + E +PD + ++ K+ A +A AAK+A +L R+KS L S++LPGKLADC +
Sbjct: 359 EKLGTFFEENPDTAEKVVHKAAEAARARKAAKKAEELTRRKSALESTALPGKLADCQTRD 418
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P E+E+F+VEGDSAGGSAKQGR+R Q I+ PL+ I
Sbjct: 419 PTEAELFVVEGDSAGGSAKQGRNRENQAIL-PLKGKIL 455
>gi|392375985|ref|YP_003207818.1| DNA gyrase subunit B [Candidatus Methylomirabilis oxyfera]
gi|258593678|emb|CBE70019.1| DNA gyrase subunit B [Candidatus Methylomirabilis oxyfera]
Length = 826
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/464 (50%), Positives = 318/464 (68%), Gaps = 22/464 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y + QI++LEGLEAVRKRPAMYIGSTG GLHHLVYE++DN+VDEA AGY ++V +
Sbjct: 25 EVYDAAQIRILEGLEAVRKRPAMYIGSTGFDGLHHLVYEVVDNSVDEALAGYCDQVDVTI 84
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
+DNSVSV DNGRGIP+D+H T + A+E V+T LHAGGKF +S Y VSGGLHGVGLS
Sbjct: 85 HSDNSVSVLDNGRGIPVDIHEQTGRPAVEVVMTTLHAGGKF--DNSAYKVSGGLHGVGLS 142
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNAL+E LEV +WRDG Y Q+Y RGKP L V + GTR+ F PD ++F
Sbjct: 143 VVNALAEQLEVEIWRDGKRYLQQYERGKPTGDLE----EVGKARKTGTRVTFIPDSEIFE 198
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
F +T++ R+RELAFLN L I L +D N+ E+++ GG+ +V+ LN +K
Sbjct: 199 DRT-FSLDTLSNRLRELAFLNKGLRIRL----TDERINEAREFYYTGGIRSFVELLNENK 253
Query: 315 -----KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
KP+H V D +++A+Q+ +D Y +T+ +AN+I T DGGTH+ G +++
Sbjct: 254 VVLHPKPIHIEV----QRDPTVVEVAIQY-NDGYGETVFSFANNINTHDGGTHLIGFRSA 308
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
LTRT+NS +K+ +++G+ +REGLT +ISV++PNP+FEGQTK RL NP+++ +
Sbjct: 309 LTRTINSYAASHDLLKNLKATVTGDDIREGLTAVISVKLPNPQFEGQTKARLNNPDMKGL 368
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
V+ V E L EYLE +P + I+ K+ A +A AA++A++L R+K L LPGKLA
Sbjct: 369 VETIVNEKLAEYLEENPVIGRRIVEKATEAARAREAARKAKELARRKGPLDGDGLPGKLA 428
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
DCS P E++IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 429 DCSEKDPALCELYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIL 471
>gi|397690038|ref|YP_006527292.1| DNA gyrase subunit B [Melioribacter roseus P3M]
gi|395811530|gb|AFN74279.1| DNA gyrase subunit B [Melioribacter roseus P3M]
Length = 663
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/478 (50%), Positives = 327/478 (68%), Gaps = 23/478 (4%)
Query: 68 FKENPV-SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGY 126
K N V S Y ++ I +L+GLEAVRKRPAMYIG G RGLHHL+ E++DN++DEA AG+
Sbjct: 1 MKNNTVQSSEYTAKNINILKGLEAVRKRPAMYIGDVGSRGLHHLINEVVDNSIDEALAGF 60
Query: 127 ASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSG 186
+ V + D SV+V D GRGIP+D+HP KSALE V+TVLHAGGKF ++ Y VSG
Sbjct: 61 NDTVIVTIHKDQSVTVEDYGRGIPVDIHPVEKKSALEVVMTVLHAGGKFDKNT--YKVSG 118
Query: 187 GLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDS-----KDRQG 241
GLHGVG+SVVNALSE L+V V RDG Y Q+Y RG P PV K + G
Sbjct: 119 GLHGVGVSVVNALSEWLKVEVRRDGKIYTQEYKRGVPQG-------PVKETGTYKKGKSG 171
Query: 242 TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG 301
T+I F PDK++F T ++F + +A R+RELA+LN +T+ L E+ E+ +Y F G
Sbjct: 172 TKITFKPDKEIFKT-VKFKYEIVAERLRELAYLNKDVTMILIDENEGIEE----KYHFKG 226
Query: 302 GLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGT 361
GL ++V++L+ + PLH + + +G +++A ++ SD+Y++ + Y N+I TI+GGT
Sbjct: 227 GLIDFVRYLDEQRNPLHKPIYIEGEKEGTPVEVAFEY-SDSYNENVHTYVNNINTIEGGT 285
Query: 362 HIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTR 420
H+ G + +LTRT N+ K+K +K+ ISL+GE +EGLT +ISV+V P+FEGQTKT+
Sbjct: 286 HLVGFRTALTRTFNNYAYKNKLIKENSKISLTGEDFKEGLTAVISVKVMEPQFEGQTKTK 345
Query: 421 LGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLR 480
LGN EV+ +V+ V E L EYLE +P V I+ KS+ A +A AA++AR+L+R+K+ L
Sbjct: 346 LGNSEVKSIVESIVGEKLAEYLEENPSVAKKIIEKSVKAAEAREAARKARELIRRKNALD 405
Query: 481 SSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S +LPGKLADCS PE EI+IVEGDSAGGSAKQGRDRRFQ I+ P++ I A
Sbjct: 406 SLNLPGKLADCSINDPEHCEIYIVEGDSAGGSAKQGRDRRFQAIL-PIKGKIINVEKA 462
>gi|288801620|ref|ZP_06407062.1| DNA gyrase, B subunit [Prevotella melaninogenica D18]
gi|288335662|gb|EFC74095.1| DNA gyrase, B subunit [Prevotella melaninogenica D18]
Length = 655
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/472 (49%), Positives = 322/472 (68%), Gaps = 17/472 (3%)
Query: 70 ENPVSKT-YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
ENP ++ Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY
Sbjct: 3 ENPENENNYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCQ 62
Query: 129 NIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 188
NIEV + DNS++V D+GRGIP+D+H +KSALE V+TVLHAGGKF S Y VSGGL
Sbjct: 63 NIEVTINEDNSITVEDDGRGIPVDMHEKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGL 120
Query: 189 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 248
HGVG+S VNALS ++ V+RDG Y Q+Y +GKP+ + V D+ GTR +FWP
Sbjct: 121 HGVGVSCVNALSTHMKSQVFRDGKIYQQEYEKGKPLYPVKV----VGETDKTGTRQQFWP 176
Query: 249 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY-NEYFFA-GGLEEY 306
D ++FTT + + +A R+RELA+LN + I L DPE + E F A GL+E+
Sbjct: 177 DPEIFTTTV-YQWAIVARRMRELAYLNAGIKITLSDLRPDPETGKTRTEVFHAKDGLKEF 235
Query: 307 VQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 365
V++++ ++ L DV+ + + I I++A+ + +D Y++ + Y N+I TI+GGTH++G
Sbjct: 236 VRYVDRHRQHLFDDVIYLKTEKQNIPIEVAVMYNTD-YTENIHSYVNNINTIEGGTHLQG 294
Query: 366 VKASLTRTLNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 421
+A+LTRTL + SK ++ I ++GE REGLT +IS++V P+FEGQTKT+L
Sbjct: 295 FRAALTRTLKTYADNDPQISKQLEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTKL 354
Query: 422 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 481
GN EV V Q+V E LT+YLE HP+ I +K + A A +AA++AR+ V++K+V+
Sbjct: 355 GNSEVSGAVQQAVGEALTDYLEEHPNEAKMICNKVILAATARVAARKARESVQRKNVMSG 414
Query: 482 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LPGKLADCS+ P++ EIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 415 GGLPGKLADCSNKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAIL-PLRGKIL 465
>gi|154684524|ref|YP_001419685.1| DNA gyrase subunit B [Bacillus amyloliquefaciens FZB42]
gi|154350375|gb|ABS72454.1| GyrB [Bacillus amyloliquefaciens FZB42]
Length = 638
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/464 (50%), Positives = 315/464 (67%), Gaps = 11/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I + +
Sbjct: 7 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIEIE 66
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+ + + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 67 KDNSITVKDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 124
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS +L+VTV RDG ++Q Y RG PV L + D+ GT F PD ++F
Sbjct: 125 VNALSTTLDVTVHRDGKIHYQAYERGVPVADLEV----IGDTDKTGTITHFVPDPEIFKE 180
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
I +D++ ++ R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 181 TIVYDYDLLSNRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 238
Query: 316 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+H+ + + DGIT+++ALQ+ +D+Y+ + + N+I T +GGTH G K LTR +
Sbjct: 239 VVHEEPIYIEGEKDGITVEVALQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 297
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N ++ K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 298 NDYARRKGIFKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 357
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
L +L +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 358 SSALETFLLENPDSARKIVEKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 417
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 418 DPSISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 460
>gi|404418103|ref|ZP_10999881.1| DNA gyrase subunit B [Staphylococcus arlettae CVD059]
gi|403489506|gb|EJY95073.1| DNA gyrase subunit B [Staphylococcus arlettae CVD059]
Length = 645
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 242/468 (51%), Positives = 314/468 (67%), Gaps = 9/468 (1%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ YG+EQIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGYA I+V
Sbjct: 7 TENYGAEQIQVLEGLEAVRKRPGMYIGSTSEKGLHHLVWEIVDNSIDEALAGYADEIQVV 66
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 67 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 124
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE LEV V+ D +HQ Y RG P V+ D GT IRF D +F
Sbjct: 125 SVVNALSEDLEVYVYLDNKIHHQAYKRGIP--QFDLKVIGETDGDTTGTAIRFKADPTIF 182
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE--YFFAGGLEEYVQWLN 311
T +++ T+ RIRELAFLN ++I LR E E Y E YF+ GG++ YV+ LN
Sbjct: 183 TETTAYNYETLEQRIRELAFLNKGISITLRDERETLEDGSYREDSYFYEGGIKSYVEMLN 242
Query: 312 TDKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 370
+K+PLH+ + + D I +++ALQ+ S ++ +L YAN+I T +GGTH +G K +L
Sbjct: 243 ENKEPLHEEPIYVHESKDEIEVEIALQYNS-GFATNLLTYANNIHTYEGGTHEDGFKRAL 301
Query: 371 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
+R LNS G KSK +K+ LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR+VV
Sbjct: 302 SRVLNSYGIKSKIIKEDKDRLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVV 361
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
D+ E +L +P+V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLAD
Sbjct: 362 DKLFAELFERFLYENPNVARVIVEKGIMASRARIAAKKAREVTRRKSALEVSSLPGKLAD 421
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
CSS PE+SEIFIVEGDSAGGS K GRD Q I+ PL+ I A
Sbjct: 422 CSSKDPEKSEIFIVEGDSAGGSTKSGRDSETQAIL-PLRGKILNVEKA 468
>gi|385267030|ref|ZP_10045117.1| DNA topoisomerase IV subunit B [Bacillus sp. 5B6]
gi|385151526|gb|EIF15463.1| DNA topoisomerase IV subunit B [Bacillus sp. 5B6]
Length = 640
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/464 (50%), Positives = 315/464 (67%), Gaps = 11/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I + +
Sbjct: 9 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIEIE 68
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+ + + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 69 KDNSITVKDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 126
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS +L+VTV RDG ++Q Y RG PV L + D+ GT F PD ++F
Sbjct: 127 VNALSTTLDVTVHRDGKIHYQAYERGVPVADLEV----IGDTDKTGTITHFVPDPEIFKE 182
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
++D++ ++ R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 183 TTEYDYDLLSNRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 240
Query: 316 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+H+ + + DGIT+++ALQ+ +D+Y+ + + N+I T +GGTH G K LTR +
Sbjct: 241 VVHEEPIYIEGEKDGITVEVALQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 299
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N ++ K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 300 NDYARRKGIFKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 359
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
L +L +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 360 SSALETFLLENPDSARKIVEKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 419
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 420 DPSISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 462
>gi|357043575|ref|ZP_09105266.1| DNA gyrase, B subunit [Prevotella histicola F0411]
gi|355368239|gb|EHG15660.1| DNA gyrase, B subunit [Prevotella histicola F0411]
Length = 658
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/464 (49%), Positives = 317/464 (68%), Gaps = 16/464 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY NIEV +
Sbjct: 11 YSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCKNIEVTINE 70
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNS++V D+GRGIP+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S V
Sbjct: 71 DNSITVEDDGRGIPVDEHKKLHKSALEIVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCV 128
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS ++ V+RDG Y Q+Y +GKP+ + + D+ GTR +FWPD +FTT
Sbjct: 129 NALSTHMKSQVFRDGKIYQQEYEKGKPLYPVKV----IGETDKTGTRQQFWPDGDIFTTT 184
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY-NEYFFA-GGLEEYVQWLNTDK 314
+ F + +A R+RELA+LN + I L DPE + E F A GL+E+V++++ +
Sbjct: 185 V-FQWDIVARRMRELAYLNAGIKITLTDLRPDPETGKTRTEVFHAKDGLKEFVRYVDRHR 243
Query: 315 KPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+ L DV+ + + GI I++A+ + +D Y++ + Y N+I TI+GGTH++G +A+LTRT
Sbjct: 244 QHLFDDVIYLKTEKQGIPIEVAVMYNTD-YTENIHSYVNNINTIEGGTHLQGFRAALTRT 302
Query: 374 LNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
L + SK ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 303 LKAYADNDPQISKQIEKAKIEITGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGA 362
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
V Q+V E LT+YLE HP+ I +K + A A +AA++AR+ V++K+V+ LPGKLA
Sbjct: 363 VQQAVGEALTDYLEEHPNEAKMICNKVILAATARVAARKARESVQRKNVMSGGGLPGKLA 422
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
DCS+ P++ EIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 423 DCSNKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAIL-PLRGKIL 465
>gi|357051619|ref|ZP_09112793.1| DNA gyrase subunit B [Enterococcus saccharolyticus 30_1]
gi|355379543|gb|EHG26700.1| DNA gyrase subunit B [Enterococcus saccharolyticus 30_1]
Length = 649
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/466 (50%), Positives = 320/466 (68%), Gaps = 11/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DEA AG+A+ I+V
Sbjct: 12 AKEYDASQIQVLEGLEAVRKRPGMYIGSTSSEGLHHLVWEIVDNSIDEALAGFATAIQVI 71
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++V D+GRGIP+D+ T + A+ETV T+LHAGGKFGG S LHGVG
Sbjct: 72 IEEDNSITVVDDGRGIPVDIQAKTGRPAVETVFTILHAGGKFGGGGYKVSGG--LHGVGS 129
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS +L+V V+++G Y+Q+Y RG V L +D DR GT + F PD ++F
Sbjct: 130 SVVNALSTTLDVKVYKEGKVYYQEYHRGAVVEDLKV----IDETDRHGTTVHFVPDPEIF 185
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T F+ + +A R+RELAFLN L I++ ED E EY + GG++ YV+ LN
Sbjct: 186 TETTVFNFDKLATRVRELAFLNRGLKISI--EDKREEHPVLKEYHYDGGIKSYVEHLNAS 243
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K + + + + GIT++++LQ+ +D+Y + +L +AN+I T +GGTH G K +LTR
Sbjct: 244 KTVIFPEPIYLEGEQQGITVEVSLQY-TDSYHNNLLSFANNIHTYEGGTHESGFKTALTR 302
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N +KSK +K+ D +L+GE VREGLT +IS++ P+P+FEGQTKT+LGN EVR V D+
Sbjct: 303 VINDYARKSKLMKENDENLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEVRTVTDR 362
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ T++L +P V ++ K L A KA AAKRAR++ R+K L S+LPGKLADCS
Sbjct: 363 LFSEHFTKFLMENPAVGRQVVEKGLLASKARQAAKRAREMTRRKGALEISNLPGKLADCS 422
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PE+ E+FIVEGDSAGGSAKQGR R FQ I+ P++ I A
Sbjct: 423 SNDPEKCELFIVEGDSAGGSAKQGRSREFQAIL-PIRGKILNVEKA 467
>gi|317478438|ref|ZP_07937599.1| DNA gyrase, subunit B [Bacteroides sp. 4_1_36]
gi|316905397|gb|EFV27190.1| DNA gyrase, subunit B [Bacteroides sp. 4_1_36]
Length = 653
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/466 (48%), Positives = 320/466 (68%), Gaps = 12/466 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y +E IQVLEGLEAVRKRPAMYIG +GLHHLVYE++DN++DEA AGY +IEV +
Sbjct: 12 SYSAENIQVLEGLEAVRKRPAMYIGDISSKGLHHLVYEVVDNSIDEALAGYCDHIEVTIN 71
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+D H KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 72 EDNSITVQDNGRGIPVDYHEKEKKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 129
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS + V+R+G Y Q+YS G P+ + V V + D GTR +FWPD +FT
Sbjct: 130 VNALSTHMTTQVFRNGKIYQQEYSCGHPLYS----VKEVGTTDITGTRQQFWPDGTIFTE 185
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRK-EDSDPEKNQYNEYFFAG-GLEEYVQWLNTD 313
+ ++++ +A R+RELA+LN + I+L D E N E F++ GL+E+V+++++
Sbjct: 186 TV-YNYDILATRMRELAYLNAGIKISLTDLRVKDEEGNAKKEIFYSEEGLKEFVRYVDSS 244
Query: 314 KKP-LHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
++ ++DV+ + G +++A+ + + +Y++ + Y N+I TI+GGTH+ G + +LTR
Sbjct: 245 REHFMNDVIYINTEKQGTPVEVAIMYNT-SYNENVHSYVNNINTIEGGTHLAGFRRALTR 303
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
TL + +K ++ + ++G+ REGLT +IS++V P+FEGQTKT+LGN EV VDQ
Sbjct: 304 TLKKYAEDNKMLEKAKVEIAGDDFREGLTAVISIKVAEPQFEGQTKTKLGNNEVMGAVDQ 363
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+V E LT YLE HP I+ K + A +A +AA++AR+ V++KS + +PGKLADCS
Sbjct: 364 AVGEALTYYLEEHPKEAKLIVDKVILAAQARIAARKARESVQRKSPMSGGGMPGKLADCS 423
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PEE E+F+VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 424 SKDPEECELFLVEGDSAGGSAKQGRNRAFQAIL-PLRGKILNVEKA 468
>gi|448491565|ref|ZP_21608405.1| DNA gyrase subunit B [Halorubrum californiensis DSM 19288]
gi|445692565|gb|ELZ44736.1| DNA gyrase subunit B [Halorubrum californiensis DSM 19288]
Length = 638
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/458 (50%), Positives = 319/458 (69%), Gaps = 10/458 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGL+AVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ IEV +
Sbjct: 7 YGAGQIQVLEGLQAVRKRPAMYIGSTDGRGLHHLVYEVVDNSIDEALAGHCEEIEVRIHD 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSV+D+GRGIP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVSDDGRGIPVDTHEEYDRPALEVILTVLHAGGKF--DSKSYQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS+ LEV V RDG + +++ G+P V +D+ + GT IRFWPD+++F T
Sbjct: 125 NALSQRLEVEVKRDGGVFRHRFAGGEPAEDGFERVRDMDADESTGTEIRFWPDEEIFETT 184
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
F +T+A R+RELAFLN + I L + D E+ + + GG+ E+V +LN + P
Sbjct: 185 -DFQTSTLANRLRELAFLNSGVEIRLVDDRDDTEET----FKYDGGIREFVAYLNETRSP 239
Query: 317 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
+H+ V+ F + DG+ +++A+Q ++ ++ +AN+I T +GGTH+ G K +LTRT+N
Sbjct: 240 IHEEVIYFEGETDGVHVEVAMQ-ATEELQGSVHAFANNINTREGGTHLTGFKTALTRTVN 298
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+ V D D +L GE VREGLT ++SV+ P+P+FEGQTKT+LGN EVR VV+ +
Sbjct: 299 DYANEHGLVDDLDANLKGEDVREGLTAVVSVKHPDPQFEGQTKTKLGNSEVRGVVESATH 358
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L + E +PD + ++ K+ A +A AAK+A +L R+KS L S++LPGKLADC +
Sbjct: 359 EKLGTFFEENPDTAEKVVHKAAEAARARKAAKKAEELTRRKSALESTALPGKLADCQTRD 418
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P E+E+F+VEGDSAGGSAKQGR+R Q I+ PL+ I
Sbjct: 419 PTEAELFVVEGDSAGGSAKQGRNRENQAIL-PLKGKIL 455
>gi|448435817|ref|ZP_21586885.1| DNA gyrase subunit B [Halorubrum tebenquichense DSM 14210]
gi|445683252|gb|ELZ35652.1| DNA gyrase subunit B [Halorubrum tebenquichense DSM 14210]
Length = 638
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/458 (51%), Positives = 317/458 (69%), Gaps = 10/458 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGL+AVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY IEV +
Sbjct: 7 YGAGQIQVLEGLQAVRKRPAMYIGSTDGRGLHHLVYEVVDNSIDEALAGYCEEIEVRVHD 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSV D+GRGIP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVRDDGRGIPVDTHEEYDRPALEVILTVLHAGGKF--DSKSYQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LEV V RDG Y ++ RG+P V +D+ + GT+IRFWPD ++F T
Sbjct: 125 NALSERLEVEVKRDGGVYRHEFERGEPGEDAFERVRDMDADESTGTQIRFWPDDEIFETT 184
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
F +T+A R+RELAFLN + I L + D + + + GG+ E+V +LN + P
Sbjct: 185 -DFQTSTLANRLRELAFLNSGVEIRLVDDRDDTAET----FKYDGGIREFVAYLNETRSP 239
Query: 317 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
+H+ V+ F + +G+ +++A+Q ++ ++ +AN+I T +GGTH+ G K +LTRT+N
Sbjct: 240 IHEEVIYFEGESEGVHVEVAMQ-ATEELQGSVHAFANNINTREGGTHLTGFKTALTRTVN 298
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+ V D D +L GE VREGLT ++SV+ P+P+FEGQTKT+LGN EVR VV+ +
Sbjct: 299 DYANEHGLVDDLDANLKGEDVREGLTAVVSVKHPDPQFEGQTKTKLGNSEVRGVVESATH 358
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L + E +PD + ++ K+ A +A AAK+A +L R+KS L S++LPGKLADC +
Sbjct: 359 EKLGTFFEENPDTAEKVVHKAAEAARARKAAKKAEELTRRKSALESTALPGKLADCQTRD 418
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P E+E+F+VEGDSAGGSAKQGR+R Q I+ PL+ I
Sbjct: 419 PTEAELFVVEGDSAGGSAKQGRNRENQAIL-PLKGKIL 455
>gi|189462935|ref|ZP_03011720.1| hypothetical protein BACCOP_03637 [Bacteroides coprocola DSM 17136]
gi|189430362|gb|EDU99346.1| DNA gyrase, B subunit [Bacteroides coprocola DSM 17136]
Length = 654
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/465 (49%), Positives = 309/465 (66%), Gaps = 12/465 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRPAMYIG +GLHHLVYE++DN++DEA AGY ++IEV +
Sbjct: 13 YSASSIQVLEGLEAVRKRPAMYIGDISEKGLHHLVYEVVDNSIDEALAGYCTHIEVTINE 72
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNS++V DNGRGIP+D H KSALE V+TVLHAGGKF S Y VSGGLHGVG+S V
Sbjct: 73 DNSITVQDNGRGIPVDFHEKEKKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCV 130
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS + V+R+G + Q+Y+ GKP+ V V + D GTR FWPD +FTT
Sbjct: 131 NALSTHMTTNVFRNGKIHQQEYACGKPLYA----VKEVGTTDITGTRQTFWPDGSIFTTT 186
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDK 314
++ +N + R+RELA+LN +TI L + E + + F G++E+V++LN+
Sbjct: 187 -EYKYNILQARMRELAYLNKGITITLTDKREKEEDGSFKQEIFHSEEGVKEFVRFLNSTN 245
Query: 315 KPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
PL DV+ + GI I+ A+ + + + + + Y N+I TI+GGTH G + +LTR
Sbjct: 246 TPLIDDVIYLNTEKQGIPIECAIMY-NTGFRENLHSYVNNINTIEGGTHEAGFRTALTRV 304
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
L ++SK ++ + +SGE REGL +ISV+V P+FEGQTKT+LGN EV V+Q+
Sbjct: 305 LKKYAEESKALEKAKVEISGEDFREGLIAVISVKVAEPQFEGQTKTKLGNNEVSGAVNQA 364
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
V E LT YLE HP +I+ K + A A +AA++AR+ V++KS + LPGKLADCSS
Sbjct: 365 VGEALTYYLEEHPKEAKTIVDKVVLAATARIAARKARESVQRKSPMGGGGLPGKLADCSS 424
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
T EE E+F+VEGDSAGGSAKQGR R+FQ I+ PL+ I A
Sbjct: 425 RTAEECELFLVEGDSAGGSAKQGRSRQFQAIL-PLRGKILNVEKA 468
>gi|394994154|ref|ZP_10386883.1| DNA gyrase subunit B [Bacillus sp. 916]
gi|393805003|gb|EJD66393.1| DNA gyrase subunit B [Bacillus sp. 916]
Length = 638
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/464 (50%), Positives = 315/464 (67%), Gaps = 11/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I + +
Sbjct: 7 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIEIE 66
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+ + + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 67 KDNSITVKDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 124
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS +L+VTV RDG ++Q Y RG PV L + D+ GT F PD ++F
Sbjct: 125 VNALSTTLDVTVHRDGKIHYQAYERGVPVADLEV----IGDTDKTGTITHFVPDPEIFKE 180
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
++D++ ++ R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 181 TTEYDYDLLSNRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 238
Query: 316 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+H+ + + DGIT+++ALQ+ +D+Y+ + + N+I T +GGTH G K LTR +
Sbjct: 239 VVHEEPIYIEGEKDGITVEVALQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 297
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N ++ K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 298 NDYARRKGIFKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 357
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
L +L +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 358 SSALETFLLENPDSARKIVEKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 417
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 418 DPSISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 460
>gi|108802861|ref|YP_642798.1| DNA gyrase subunit B [Rubrobacter xylanophilus DSM 9941]
gi|108764104|gb|ABG02986.1| DNA gyrase subunit B [Rubrobacter xylanophilus DSM 9941]
Length = 644
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/463 (49%), Positives = 322/463 (69%), Gaps = 11/463 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAV++RP MYIGSTGPRGLHHLV+EI+DN++DEA AGY + I V +
Sbjct: 14 YDASSIQVLEGLEAVKRRPGMYIGSTGPRGLHHLVWEIVDNSIDEALAGYCTEISVTVHP 73
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNSV+V+D+GRG+P+ + KSA E ++T LHAGGKF G + Y VSGGLHGVG SVV
Sbjct: 74 DNSVTVSDDGRGMPVGVMEKYGKSAAEVIMTTLHAGGKFDGQT--YKVSGGLHGVGASVV 131
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LE+ + RDG + Q+Y RG PVT L + ++ GT +RF PD Q+F T
Sbjct: 132 NALSEWLELEIRRDGHLWTQRYERGFPVTGLE-RGRKLGKREGTGTTVRFRPDPQIFET- 189
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
++F +T++ R RE AFLN L I L E E+ + Y + GG++++V +N K P
Sbjct: 190 VEFSFDTLSRRFRESAFLNKGLRIRLADE---REEGREVVYRYEGGIKDFVAHINEAKDP 246
Query: 317 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
+H ++ F ++ + +++A+QW S Y D++ +AN+I T +GGTH+ G +A+LTRT+N
Sbjct: 247 VHKTILYFHREEEAGDVEVAMQWNS-GYQDSVFTFANNINTHEGGTHLSGFRAALTRTIN 305
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
++ +K+K+ +L+G+ +REGL +ISV++ P+FEGQTKT+LGN E++ +V+ +
Sbjct: 306 EYARQKGLLKEKEENLTGDDIREGLAAVISVKLREPQFEGQTKTKLGNTEIKGLVESATN 365
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
+L E+LE +P +I++K+++A +A LAA +AR +R K L SS+LPGKLADCSS
Sbjct: 366 RHLAEFLEENPGQARAIVTKAINASRARLAASKARKAIR-KGYLESSTLPGKLADCSSKD 424
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 425 PARSELYIVEGDSAGGSAKQGRDRNFQAIL-PLRGKILNVEKA 466
>gi|429124642|ref|ZP_19185174.1| DNA gyrase subunit B [Brachyspira hampsonii 30446]
gi|426279415|gb|EKV56438.1| DNA gyrase subunit B [Brachyspira hampsonii 30446]
Length = 636
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/465 (49%), Positives = 304/465 (65%), Gaps = 12/465 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
KTY S+ IQVLEGL+ VRKRP MYIGSTG +GLHHLVYE++DN++DEA AGY NI V +
Sbjct: 5 KTYSSKNIQVLEGLDPVRKRPGMYIGSTGAQGLHHLVYEVVDNSIDEAMAGYCKNITVTI 64
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DN + V D+GRGIP+D+HP SALE V+T LHAGGKF + Y VSGGLHGVG+S
Sbjct: 65 EKDNIIKVEDDGRGIPVDMHPKLKISALEVVMTKLHAGGKFDNET--YKVSGGLHGVGVS 122
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS L V +DG Y Q Y RG P V V + GT + F D +F
Sbjct: 123 VVNALSTELIAEVRKDGKLYRQVYHRGVPEEP----VKEVGTSTSNGTTVTFKADADIFE 178
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
T I +D+ +A R+RELAFLN + I L D + NE+++ GG+E ++ LN +K
Sbjct: 179 TTI-YDYKILANRLRELAFLNRGIRITL--TDKREAEVVSNEFYYEGGIEMFITHLNENK 235
Query: 315 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
K LHD + K D +++A+Q+ DAY++ + Y N+I T +GGTH+ G + +LTR
Sbjct: 236 KALHDKPIYLHKTEDKTDVEVAMQYV-DAYNENIFTYCNNINTTEGGTHLVGFRTALTRV 294
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
KK + K I+ GE REGL ++SV++PNP+FEGQTKT+LGN EVR V ++
Sbjct: 295 YTDFAKKLELDKKNKITFMGEDTREGLVAVVSVKIPNPQFEGQTKTKLGNTEVRAVTEKL 354
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
V E L +Y +P V+ +IL K +SA +A AA++ARDL R+K+ L S SLPGKLADCS
Sbjct: 355 VVEGLNDYFSQNPKVIKAILEKIISAAQAREAARKARDLARRKNALESDSLPGKLADCSE 414
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
++ E+++VEGDSAGG+AK GRDR FQ I+ PL+ + A
Sbjct: 415 QEVDKCEVYLVEGDSAGGTAKGGRDRHFQAIL-PLRGKVLNVEKA 458
>gi|319893736|ref|YP_004150611.1| DNA gyrase subunit B [Staphylococcus pseudintermedius HKU10-03]
gi|386318035|ref|YP_006014198.1| DNA gyrase subunit B [Staphylococcus pseudintermedius ED99]
gi|317163432|gb|ADV06975.1| DNA gyrase subunit B [Staphylococcus pseudintermedius HKU10-03]
gi|323463206|gb|ADX75359.1| DNA gyrase, B subunit [Staphylococcus pseudintermedius ED99]
Length = 640
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 243/466 (52%), Positives = 313/466 (67%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA NIEV
Sbjct: 7 SENYGASQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYADNIEVV 66
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 67 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 124
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE+LEV V RDG +HQ Y +G P L V D+ GT IRF D +F
Sbjct: 125 SVVNALSETLEVYVHRDGRIHHQAYHKGVPAFDLK----QVGDTDQTGTVIRFKADGTIF 180
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
+++ T+ RIRELAFLN + I L E D E + + Y + GG++ YV+ +N +
Sbjct: 181 QETTVYNYETLQKRIRELAFLNKGIRITLTDE-RDEENVREDSYHYEGGIKSYVELINEN 239
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+PLHD V + D I +++ALQ+ S ++ +L YAN+I T +GGTH +G K +LTR
Sbjct: 240 KEPLHDEPVYVHQTRDDIEVEIALQYNS-GFATNLLTYANNIHTYEGGTHEDGFKRALTR 298
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LN+ G +SK +K+ LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR++VD+
Sbjct: 299 VLNNYGTQSKLIKEDKDRLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQIVDR 358
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E +L HP V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 359 VFSELFERFLYEHPQVARIIVEKGIMASRARIAAKKAREVTRRKSALDISSLPGKLADCS 418
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEIF+VEGDSAGGS K GRD R Q I+ PL+ I A
Sbjct: 419 SKDPSESEIFLVEGDSAGGSTKSGRDSRTQAIL-PLRGKILNVEKA 463
>gi|150387859|ref|YP_001317908.1| DNA gyrase subunit B [Alkaliphilus metalliredigens QYMF]
gi|149947721|gb|ABR46249.1| DNA gyrase, B subunit [Alkaliphilus metalliredigens QYMF]
Length = 635
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 244/465 (52%), Positives = 323/465 (69%), Gaps = 13/465 (2%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
EN + + YG+EQIQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN+VDEA AGY
Sbjct: 2 ENKIQE-YGAEQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGYCDV 60
Query: 130 IEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 189
I+V + DNS+ V DNGRGIPI+ HP T KS LETV+TVLHAGGKFGG S LH
Sbjct: 61 IDVTIYQDNSIKVVDNGRGIPIETHPQTGKSTLETVMTVLHAGGKFGGGGYKVSGG--LH 118
Query: 190 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 249
GVG+SVVNALSE +EV V +DG Y Q+Y RG P+T V V GT I F D
Sbjct: 119 GVGISVVNALSEYVEVEVRKDGKLYKQRYERGIPIT----DVQEVGETTETGTTITFKAD 174
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 309
++F I + + T+ R+RE+AFLN + I LR D E+ + + + GG++E+V
Sbjct: 175 SEIFE-EILYVYTTLENRLREMAFLNKGIKITLR--DLREEEVMESSFRYDGGIQEFVMH 231
Query: 310 LNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
LN +++ L D V+ F K +G +++ALQ+ AY++ + YAN+I T +GGTH+ G KA
Sbjct: 232 LNRNREALIDKVIYFEKQKEGSVVEVALQYTG-AYTENIFSYANTINTHEGGTHLSGFKA 290
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTR +N +K+ +K+K+I+L GE +REGLT IISV++ +P+FEGQTKT+LGN E++
Sbjct: 291 GLTRVINEYARKNGILKEKEINLLGEDIREGLTAIISVKMADPQFEGQTKTKLGNSEMKG 350
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+V+ S +YL +LE +P I+ KSL A +A AAK+AR+L R+K L +++LPGKL
Sbjct: 351 IVESSTSQYLEAFLEENPHEAKIIIEKSLRAQRAREAAKKARELTRRKGALENTALPGKL 410
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADC+ P SEI+IVEG+SAGGSAKQGRDR Q I+ PL+ I
Sbjct: 411 ADCAEKDPALSEIYIVEGNSAGGSAKQGRDRATQAIL-PLRGKIL 454
>gi|320159847|ref|YP_004173071.1| DNA gyrase subunit B [Anaerolinea thermophila UNI-1]
gi|319993700|dbj|BAJ62471.1| DNA gyrase subunit B [Anaerolinea thermophila UNI-1]
Length = 639
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/462 (49%), Positives = 324/462 (70%), Gaps = 10/462 (2%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
PV+ +YG++ IQVLEGLEAVR+RP MY+G T + LHHLVYE++DN++DEA AG +I+
Sbjct: 4 PVNTSYGAKDIQVLEGLEAVRRRPGMYVGGTDLKALHHLVYEVVDNSIDEALAGACDHIQ 63
Query: 132 VALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 191
V + D+SV+V DNGRGIP+D+HP KSALE V+TVLHAGGKFG S Y VSGGLHGV
Sbjct: 64 VTIHPDSSVTVEDNGRGIPVDIHPEKQKSALEVVMTVLHAGGKFGSGS--YKVSGGLHGV 121
Query: 192 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 251
G+S VNALSE EV V RDG + Q+Y RG PV + V+ + GT+ F D
Sbjct: 122 GVSAVNALSEWCEVEVRRDGKVHFQRYERGVPVEPV--KVIGKCKPNETGTKTTFRFDPT 179
Query: 252 VFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLN 311
+F + + +T+ R RE+AF+ K+TI L E + E + ++F GG+ +V++LN
Sbjct: 180 IFKGDLDYKFDTLVQRFREMAFVTRKVTIRLIDERASREMS----FYFEGGITSFVRYLN 235
Query: 312 TDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+++ LH VV K+V+G+ I+ A+Q+ +DAY++++ +AN+I TIDGGTH+ G++A++T
Sbjct: 236 RNREVLHPVVYAEKEVEGVGIEAAIQY-TDAYAESVYSFANTINTIDGGTHLTGLRAAIT 294
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R +N +++ +KD D + SG+ REGLT I+SV+ P+P+FE QTK +L NPEV+ V
Sbjct: 295 RVINDYARRNNFLKDGDPNFSGDDTREGLTAIVSVKHPDPQFESQTKVKLMNPEVQTYVQ 354
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
Q V E + +LE +P +I+ K L++ +A AA++ARDLV +KS L S +LPGKLADC
Sbjct: 355 QVVGEAFSTFLEENPQAAKAIIQKCLTSARARDAARKARDLVIRKSTLESLTLPGKLADC 414
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
S P ++E++IVEGDSAGGSAKQGRDR FQ ++ PL+ I
Sbjct: 415 SERDPSKTELYIVEGDSAGGSAKQGRDRHFQAVL-PLRGKIL 455
>gi|392988234|ref|YP_006486827.1| DNA gyrase subunit B [Enterococcus hirae ATCC 9790]
gi|392335654|gb|AFM69936.1| DNA gyrase subunit B [Enterococcus hirae ATCC 9790]
Length = 648
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/466 (50%), Positives = 317/466 (68%), Gaps = 11/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DE AG+A+ I+V
Sbjct: 11 AKEYDASQIQVLEGLEAVRKRPGMYIGSTSSEGLHHLVWEIVDNSIDEVLAGFATKIQVI 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++V D+GRGIP+D+ T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNSITVIDDGRGIPVDIQAKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS L+V V++DG Y+Q+Y RG V L ++ DR GT + F PD ++F
Sbjct: 129 SVVNALSTQLDVKVYKDGNVYYQEYRRGAVVDDLKI----IEQTDRNGTTVHFIPDPEIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T FD N +A RIRELAFLN + I++ ED E EY + GG++ YV++LN +
Sbjct: 185 TETTVFDFNKLATRIRELAFLNRGMKISI--EDKREESPVVKEYHYDGGIKSYVEYLNAN 242
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K + + V + IT+++++Q+ +D Y ++ +AN+I T +GGTH G K +LTR
Sbjct: 243 KTVIFPEPVYLEGEQQDITVEVSMQY-TDGYHSNIMSFANNIHTYEGGTHESGFKTALTR 301
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N +K K +K+ D +L+GE VREGLT +IS++ P+P+FEGQTKT+LGN EVR V D+
Sbjct: 302 VINDYARKQKLMKENDDNLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEVRTVTDR 361
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ ++L +P V I+ K L A KA LAAKRAR++ R+K L S+LPGKLADCS
Sbjct: 362 LFSEHFMKFLLENPSVGRQIIEKGLLASKARLAAKRAREVTRRKGALEISNLPGKLADCS 421
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PE+ E+FIVEGDSAGGSAKQGR+R FQ I+ P++ I A
Sbjct: 422 SNDPEKCELFIVEGDSAGGSAKQGRNREFQAIL-PIRGKILNVEKA 466
>gi|194332868|ref|YP_002014728.1| DNA gyrase subunit B [Prosthecochloris aestuarii DSM 271]
gi|194310686|gb|ACF45081.1| DNA gyrase, B subunit [Prosthecochloris aestuarii DSM 271]
Length = 644
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/466 (49%), Positives = 313/466 (67%), Gaps = 15/466 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S +Y + IQ+L+G+E VRKRPAMYIG RGLHHL+YEI+DN++DE AGY IE++
Sbjct: 10 SSSYLATNIQILDGIEHVRKRPAMYIGDINVRGLHHLIYEIVDNSIDETLAGYNDTIEMS 69
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
L D SV+V+DNGRGIP+D+HP KSALE V+TV+ AGGKF Y VSGGLHGVG
Sbjct: 70 LNDDGSVTVSDNGRGIPVDMHPQKKKSALELVMTVIGAGGKF--DKGAYKVSGGLHGVGA 127
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE EV V RDG ++Q+Y RG P C V + D+ GT+ F PD +F
Sbjct: 128 SVVNALSEWCEVEVSRDGKVWYQRYHRGVP----QCEVKIIGETDKTGTKTTFMPDASIF 183
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +F + I R+RELAFLN L I ++ D E + + GG++E+V + + +
Sbjct: 184 KTT-EFRKDVIIDRMRELAFLNSVLKIVVKDTDDSEET-----FHYEGGIKEFVTYTDHN 237
Query: 314 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
+ L + V + D +++ALQ+ +D+Y + + Y N+I T +GGTH+ G + +LTR
Sbjct: 238 RIALVKEPVYLYGERDTTVVEIALQY-NDSYQENVFSYVNNINTHEGGTHMTGFRKALTR 296
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
TLN+ +K+ +K+ +SL+G+ +EGLT IISV+V P+FEGQTKT+LGN E + +V+
Sbjct: 297 TLNAYAQKNDLLKNLKLSLTGDDFKEGLTAIISVKVAEPQFEGQTKTKLGNSETQSIVES 356
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
V E L E+LE +P+VL +I+ K SA + AA++A++L R+KSVL S+ LPGKLADCS
Sbjct: 357 IVNEQLAEFLESNPNVLKTIIEKVKSAALSRDAARKAKELTRRKSVLESTGLPGKLADCS 416
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PE E++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 417 INDPEHCELYIVEGDSAGGSAKQGRDRSFQAIL-PLKGKILNVEKA 461
>gi|374299553|ref|YP_005051192.1| DNA gyrase subunit B [Desulfovibrio africanus str. Walvis Bay]
gi|332552489|gb|EGJ49533.1| DNA gyrase, B subunit [Desulfovibrio africanus str. Walvis Bay]
Length = 807
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 239/476 (50%), Positives = 320/476 (67%), Gaps = 17/476 (3%)
Query: 63 IATEAFKENPVSKT-----YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDN 117
++ E +N V+K Y ++ I VLEGL AVRKRPAMYIGST RGLHHLVYE++DN
Sbjct: 1 MSNENLLQNGVAKISGNGGYTADSITVLEGLAAVRKRPAMYIGSTDIRGLHHLVYEVVDN 60
Query: 118 AVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGG 177
++DEA AGY I V L DNSV+V+DNGRGIP+D+HP K A+E V+T LHAGGKF
Sbjct: 61 SIDEAMAGYCDRIRVVLHLDNSVTVSDNGRGIPVDMHPKEGKPAVEVVMTKLHAGGKF-- 118
Query: 178 SSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSK 237
S Y VSGGLHGVG+S VNALSE LEV V RDG +H ++ RG V LT + + +
Sbjct: 119 DSGSYKVSGGLHGVGVSCVNALSEYLEVFVKRDGKRHHLRFERGVTVGQLT---VIGEGE 175
Query: 238 DRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEY 297
GT +RF PD+++F T QF + T++ R +ELA+LN LTI + E E+ Y
Sbjct: 176 TATGTTVRFRPDEEIFETN-QFSYETLSKRFQELAYLNDGLTIEFKDERESKEE----AY 230
Query: 298 FFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTI 357
+ GG+ +V+ LN + LHD++ +VD + + LA+Q+ + Y + +L +AN+IRT
Sbjct: 231 CYHGGIVSFVRDLNEGQGFLHDIIDVSGEVDSVIVSLAMQYNA-GYKENVLTFANNIRTK 289
Query: 358 DGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQT 417
+GGTH+ G K +LTR +N+ +K K +SG+ VREGLT ++SV++PNP+FEGQT
Sbjct: 290 EGGTHLVGFKTALTRAVNNYVEKGDLPKKLKQKVSGDDVREGLTAVVSVKLPNPQFEGQT 349
Query: 418 KTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKS 477
KT+LGN E+ +V V E L + E +P+ +I+ K + + +A AA++ARDLVR+K
Sbjct: 350 KTKLGNSEIAGIVSSQVYERLMTFFEENPNDAKAIIEKIVDSARAREAARKARDLVRRKG 409
Query: 478 VLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
L SLPGKLADC S PEESE+FIVEGDSAGGSAKQGRD RFQ I+ PL+ I
Sbjct: 410 ALSDHSLPGKLADCQSKKPEESELFIVEGDSAGGSAKQGRDPRFQAIL-PLRGKIL 464
>gi|427384558|ref|ZP_18881063.1| DNA gyrase, B subunit [Bacteroides oleiciplenus YIT 12058]
gi|425727819|gb|EKU90678.1| DNA gyrase, B subunit [Bacteroides oleiciplenus YIT 12058]
Length = 653
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/471 (48%), Positives = 316/471 (67%), Gaps = 12/471 (2%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
N + Y +E IQVLEGLEAVRKRPAMYIG +GLHHLVYE++DN++DEA AGY +I
Sbjct: 7 NSNNGNYSAENIQVLEGLEAVRKRPAMYIGDISTKGLHHLVYEVVDNSIDEALAGYCDHI 66
Query: 131 EVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 190
EV + DNS++V DNGRGIP+D H KSALE V+TVLHAGGKF S Y VSGGLHG
Sbjct: 67 EVTINEDNSITVQDNGRGIPVDFHEKEQKSALEVVMTVLHAGGKFDKGS--YKVSGGLHG 124
Query: 191 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 250
VG+S VNALS + V+R+G Y Q+Y G P V + + D GTR +FWPD
Sbjct: 125 VGVSCVNALSTHMTTQVFRNGKIYQQEYECGHP----QYPVKEIGTSDITGTRQQFWPDN 180
Query: 251 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK-EDSDPEKNQYNEYFFAG-GLEEYVQ 308
+FT + +++ +A R+RELA+LN + I L D E N E F++ GL+E+V+
Sbjct: 181 TIFTETV-YNYEILASRMRELAYLNAGIKITLTDLRVKDEEGNAKMEMFYSEEGLKEFVR 239
Query: 309 WLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
++++ ++ L +DV+ + G +++A+ + + +Y++ + Y N+I TI+GGTH+ G +
Sbjct: 240 YIDSSREHLVNDVIYINTEKQGTPVEVAIMYNT-SYNENIHSYVNNINTIEGGTHLAGFR 298
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
+LTRTL + +K ++ + ++G+ REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 299 RALTRTLKKYAEDNKMLEKAKVEIAGDDFREGLTAVISIKVQEPQFEGQTKTKLGNSEVM 358
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
VDQ+V E L YLE HP ++ K + A +A +AA++AR+ V++KS + +PGK
Sbjct: 359 GAVDQAVGEALNYYLEEHPKEAKLVVDKVILAAQARVAARKARESVQRKSPMSGGGMPGK 418
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LADCSS PEE E+F+VEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 419 LADCSSKDPEECELFLVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNVEKA 468
>gi|160331171|ref|XP_001712293.1| gyrB [Hemiselmis andersenii]
gi|159765740|gb|ABW97968.1| gyrB [Hemiselmis andersenii]
Length = 688
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/459 (50%), Positives = 315/459 (68%), Gaps = 10/459 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + +I VLEGLE VR+RP ++IGSTG +GLHHL YEI+DN+VDEA G+ +I ++L
Sbjct: 47 YDATKITVLEGLEPVRRRPGVFIGSTGTKGLHHLAYEIIDNSVDEALGGFCDDILISLND 106
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
++++++ D GRGIPID HP T K+ALETV+T+LHAGGK GY VSGGLHGVG+SVV
Sbjct: 107 NSTLTIKDKGRGIPIDTHPVTGKTALETVMTILHAGGK--FGGGGYKVSGGLHGVGVSVV 164
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE L + R ++ RGK + + + K++ GT + F PD Q+F++
Sbjct: 165 NALSEFLHINTRRLEKGCSMRFVRGKTIGEIKAKKRNFNFKNKNGTSVNFKPDFQIFSST 224
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA--GGLEEYVQWLNTDK 314
+D + GR+ ELAFLN L + L+ D K NE F GG+ EY+ L+ K
Sbjct: 225 FIYDPFILGGRLNELAFLNSNLKLILQ----DRRKKNINESIFVHNGGISEYIFSLSKKK 280
Query: 315 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
PLH + K++ GI++ +ALQW +D + +L +AN+IRTI+GGTH++ +K +TRTL
Sbjct: 281 TPLHKTISIEKELKGISVQVALQWTTDHSQENILSFANNIRTIEGGTHLDSLKIVITRTL 340
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N G+K+ KD +LSGE +REGLT IISV++P PEFEGQTK++LGNP+VR +VD V
Sbjct: 341 NFFGRKTGKFKDNFRNLSGEFIREGLTGIISVKIPEPEFEGQTKSKLGNPDVRSIVDTIV 400
Query: 435 QEYLTEYLELH-PDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
+YL + E D SIL K++ A +A+ AAK+AR+LVR+KSVL ++LPGKLADCS
Sbjct: 401 SDYLKNFFETQGKDACLSILEKAIEAYQASEAAKKARELVRRKSVLEFTTLPGKLADCSL 460
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESI 532
P +SEIFIVEGDSAGGSAKQ RDR FQ I+ PL+ I
Sbjct: 461 KDPNKSEIFIVEGDSAGGSAKQARDRMFQAIL-PLRGKI 498
>gi|20806552|ref|NP_621723.1| DNA gyrase subunit B [Thermoanaerobacter tengcongensis MB4]
gi|20514990|gb|AAM23327.1| DNA gyrase (topoisomerase II) B subunit [Thermoanaerobacter
tengcongensis MB4]
Length = 654
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 239/466 (51%), Positives = 324/466 (69%), Gaps = 16/466 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+TY + QIQ+LEGLEAVRKRP MYIGSTG RGLHHLVYE++DN++DEA AGY NI V +
Sbjct: 26 ETYTASQIQILEGLEAVRKRPGMYIGSTGSRGLHHLVYEVVDNSIDEALAGYCKNIVVTI 85
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DNS++V D+GRGIP D+HP K A+E LT+LHAGGKF ++ Y VSGGLHGVG+S
Sbjct: 86 HKDNSITVEDDGRGIPTDIHPKVGKPAVEVALTMLHAGGKF--NNDAYKVSGGLHGVGVS 143
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALSE LEV V + G + Q Y RG P T L + + GT I F PDK++F
Sbjct: 144 VVNALSERLEVIVKQRGKVFRQVYERGVPKTPLEV----IGETEETGTIITFKPDKEIFE 199
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
I FD++ +A R+RELAFLN + I L E D ++ +N + GGL +V++LN +K
Sbjct: 200 -EIVFDYDILAQRLRELAFLNKGINIKLIDE-RDGKEEVFN---YEGGLIAFVKYLNRNK 254
Query: 315 KPLHD--VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
+ LH+ + K+ D +++ +Q+ +D+Y++ + +AN+I T +GGTH+ G K++LT+
Sbjct: 255 EVLHEEPIYMEAKNTD-YEVEVCMQY-NDSYNENIYSFANNIDTKEGGTHLIGFKSALTK 312
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N KK +KD + +L GE VREGLT I+SV++ NP+FEGQTKTRLGNPE+R +V+
Sbjct: 313 VINDYAKKYGMIKDGEKNLQGEDVREGLTAIVSVKLKNPQFEGQTKTRLGNPEMRSIVEG 372
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
V E L+ YLE +P V I+ K+L A +A AA++AR+L R+KS L +++LPGKLADCS
Sbjct: 373 VVTEKLSAYLEENPSVARIIVEKALQAARAREAARKARELTRRKSALENTALPGKLADCS 432
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P + E+FIVEGDSAGGSAK GR+ RFQ I+ PL+ I A
Sbjct: 433 EKDPSKCELFIVEGDSAGGSAKAGRNSRFQAIL-PLRGKILNVEKA 477
>gi|448456045|ref|ZP_21594898.1| DNA gyrase subunit B [Halorubrum lipolyticum DSM 21995]
gi|445812880|gb|EMA62866.1| DNA gyrase subunit B [Halorubrum lipolyticum DSM 21995]
Length = 645
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 238/462 (51%), Positives = 321/462 (69%), Gaps = 11/462 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGL+AVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY I V +
Sbjct: 7 YGAGQIQVLEGLQAVRKRPAMYIGSTDGRGLHHLVYEVVDNSIDEALAGYCDEITVTIHD 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNSVSV+D+GRGIP+D H ++ ALE ++TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DNSVSVSDDGRGIPVDTHEKYDRPALEVIMTVLHAGGKF--DSKSYQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TT 255
NALSE LEV V RDG Y +++RG+P V +D + GT IRFWPD +VF TT
Sbjct: 125 NALSERLEVEVKRDGGVYRHEFARGEPAEDGFERVRDMDDGEETGTYIRFWPDDEVFETT 184
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
A +F +T+A R+RELAFLN + ++L R D+D + + + GG+ E+V +LN
Sbjct: 185 AFEF--STLANRLRELAFLNSGVAVSLVDERGADADDDTGDEETFRYEGGIREFVGYLNE 242
Query: 313 DKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+ P+H+ V+ F + D I +++A+Q ++ ++ +AN+I T +GGTH+ G K +LT
Sbjct: 243 TRTPIHEEVIYFEDEADDIHVEVAMQ-ATEELQGSVHAFANNINTREGGTHLTGFKTALT 301
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RT+N + V D D +L GE VREGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 302 RTVNDYANEHGLVDDLDANLKGEDVREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVE 361
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+ E L + E +PD ++ K+ A +A AAK+A +L R+KS L S++LPGKLADC
Sbjct: 362 SATHEKLGTFFEENPDTARKVVHKAAEAARARKAAKKAEELTRRKSALESTALPGKLADC 421
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
+ P E+E+F+VEGDSAGGSAKQGR+R Q I+ PL+ I
Sbjct: 422 QTRDPTEAELFVVEGDSAGGSAKQGRNRENQAIL-PLKGKIL 462
>gi|371777742|ref|ZP_09484064.1| DNA gyrase subunit B [Anaerophaga sp. HS1]
Length = 656
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/465 (50%), Positives = 316/465 (67%), Gaps = 12/465 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRPAMYIG G +GLHHLVYE++DN++DEA AGY +I+V +
Sbjct: 17 YSASSIQVLEGLEAVRKRPAMYIGDIGQKGLHHLVYEVVDNSIDEALAGYCDSIQVTINE 76
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D S++V DNGRGIP+D H KSALE V+TVLHAGGKF S Y VSGGLHGVG+S V
Sbjct: 77 DGSITVVDNGRGIPVDFHEKEGKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCV 134
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS SL+ V RDG + Q+Y RGKP+ + V + D+ GT I F PD +F
Sbjct: 135 NALSSSLKAEVRRDGKIFRQEYERGKPL----APIREVGTTDQTGTAITFMPDSTIFNNT 190
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALR-KEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDK 314
++ ++ +AGR+RELAFLN L I L K + D E N +E F++ GL E+V +++ ++
Sbjct: 191 -EYKYSVLAGRMRELAFLNAGLEIILTDKREKDEEGNFKSERFYSKDGLIEFVNFIDDNR 249
Query: 315 KPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+PL + F V + I +D+A+ + + ++++ + Y N+I TI+GGTH+ G + LTRT
Sbjct: 250 EPLIEKPIFISTVKNDIPVDIAILYNT-SFNENVYSYVNNINTIEGGTHLTGFRRGLTRT 308
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
L + +KS +SG+ REGLT +ISV+V P+FEGQTKT+LGN +V VDQ+
Sbjct: 309 LKNWAEKSGMFSKLKFDISGDDFREGLTAVISVKVAEPQFEGQTKTKLGNSDVSLAVDQA 368
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
V L+ YLE +P +I++K + A A AA++AR+LV++KSVL LPGKLADCS
Sbjct: 369 VSTMLSNYLEENPKDAKAIVNKVILAATARHAARKARELVQRKSVLSGGGLPGKLADCSV 428
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PE++EIF+VEGDSAGG+AKQGRDRRFQ I+ PL+ I A
Sbjct: 429 RDPEKAEIFLVEGDSAGGTAKQGRDRRFQAIL-PLRGKILNVEKA 472
>gi|23978288|dbj|BAC21126.1| DNA gyrase B subunit [Pseudanabaena sp. PCC 7403]
Length = 392
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/398 (56%), Positives = 294/398 (73%), Gaps = 7/398 (1%)
Query: 102 TGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSA 161
TGP+GLHHLV+E++DN+VDEA G+ + I V LLAD SV+V+DNGRGIP+D+HP T KSA
Sbjct: 1 TGPKGLHHLVFEVVDNSVDEALGGHCNLILVELLADGSVTVSDNGRGIPVDIHPKTGKSA 60
Query: 162 LETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG 221
LETV+T L AGGKFGG S GY VSGGLHGVG+SVVNALSE +EV VWR Y ++ RG
Sbjct: 61 LETVMTKLGAGGKFGGES-GYKVSGGLHGVGISVVNALSEWVEVKVWRQSNVYEHRFERG 119
Query: 222 KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIA 281
P+ + + S+ GT++RF PD Q+F T FD T+AGR++ELA+LN + I
Sbjct: 120 VPLGDMKTSIAESPSR---GTQVRFKPDAQIFQTDTVFDFTTLAGRLKELAYLNAGVKIQ 176
Query: 282 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCS 340
D E+ + Y + GG+ EYV ++ +K+P+H D++ + + D + +++ALQWC
Sbjct: 177 FT--DRREEEPRIETYHYDGGIREYVAYMTREKEPIHPDIIYVQGERDNVQVEVALQWCV 234
Query: 341 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 400
DAY+D +LG+AN+IRTIDGGTH+EG+K LTR+LN + +K K +K+ D +L+GE+VREGL
Sbjct: 235 DAYNDNILGFANNIRTIDGGTHLEGLKTVLTRSLNVIARKLKKLKEGDSNLAGENVREGL 294
Query: 401 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 460
T +ISV+VPNPEFEGQTKT+LGN EVR +VD V E L EYLE HP V SIL K++ A
Sbjct: 295 TAVISVKVPNPEFEGQTKTKLGNMEVRGIVDSFVGEVLNEYLEFHPAVAISILDKAIQAF 354
Query: 461 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEE 498
AA AA+RAR+LVR+KS L SS+LPGKLADCSS P E
Sbjct: 355 NAAEAARRARELVRRKSALESSTLPGKLADCSSRDPRE 392
>gi|256374166|ref|YP_003097826.1| DNA gyrase subunit B [Actinosynnema mirum DSM 43827]
gi|255918469|gb|ACU33980.1| DNA gyrase, B subunit [Actinosynnema mirum DSM 43827]
Length = 657
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/477 (47%), Positives = 318/477 (66%), Gaps = 22/477 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
K YG+ I VLEGLEAVRKRP MYIGSTG RGLHHL+ E++DN+VDEA AGYAS + V L
Sbjct: 6 KDYGASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIQEVVDNSVDEAMAGYASKVVVTL 65
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
LA+ V V D+GRGIP+DLHP K LE VLT LHAGGKF S Y+VSGGLHGVG+S
Sbjct: 66 LANGGVRVVDDGRGIPVDLHPVEGKPTLEVVLTKLHAGGKF--DSDSYAVSGGLHGVGIS 123
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS +++V V R G ++Q++ KP L V ++ GT I FW D +F
Sbjct: 124 VVNALSTAVDVEVKRQGFTWNQRFEASKPAHELQRGVPTSET----GTTITFWADPTIFE 179
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKE------------DSDPEKNQYNEYFFAGG 302
T ++ TI+ R++E+AFLN L+I LR E + K + + + GG
Sbjct: 180 TT-DYNIETISRRLQEMAFLNKGLSIVLRDERVAEEGAEEADAEGHVAKVRERVFHYPGG 238
Query: 303 LEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGT 361
LE++V+ LN ++ +H VV F D + +++A+QW + Y+ ++ +AN+I T +GGT
Sbjct: 239 LEDFVRHLNHTREAVHQKVVSFEAKGDDLEVEVAMQWNT-GYTPSVYTFANTINTHEGGT 297
Query: 362 HIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 421
H EG +A+LTR +N + K +K+KD +L+G+ +REGL IISV++ P+FEGQTKT+L
Sbjct: 298 HEEGFRAALTRVVNEYARDKKLIKEKDANLTGDDIREGLAAIISVKLKEPQFEGQTKTKL 357
Query: 422 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 481
GN E + V +S E+L ++ E HP+ +I++K++S+ +A +AA++AR+LVR+K L
Sbjct: 358 GNSEAKSFVQKSTNEHLADWFERHPNEAKTIITKAVSSSQARIAARKARELVRRKGALDI 417
Query: 482 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKL DC S+ PEE E++IVEGDSAGGSAK+GRD +Q I+ P++ I A
Sbjct: 418 GGLPGKLKDCRSSNPEECEVYIVEGDSAGGSAKEGRDSMYQAIL-PIRGKIINVEKA 473
>gi|448323114|ref|ZP_21512578.1| DNA gyrase subunit B [Natronococcus amylolyticus DSM 10524]
gi|445600300|gb|ELY54313.1| DNA gyrase subunit B [Natronococcus amylolyticus DSM 10524]
Length = 643
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/460 (50%), Positives = 317/460 (68%), Gaps = 9/460 (1%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +I V + A
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDARGLHHLVYEVVDNSIDEALAGHCDDITVTINA 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D+SV+V+D+GRGIP+D H + ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DDSVTVSDDGRGIPVDTHDEYERPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LE V RDG + + G+PV + +D + GT + FWPD VF T
Sbjct: 125 NALSERLEAEVKRDGAVFRHAFEAGEPVGDME-RARDMDDDEETGTEVTFWPDTDVFETR 183
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE--YFFAGGLEEYVQWLNTDK 314
F +T++ R+RELAFLN + I LR E + E + E Y + GG+ E+V++LN +
Sbjct: 184 -DFSFSTLSNRLRELAFLNSGVRITLRDERQETEDGEVIEETYEYEGGIREFVEYLNETR 242
Query: 315 KPLHDVVGFRKDVD-GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+HD V + +D D I +++A+Q D ++ +AN+I T +GGTH+ G K +LTR
Sbjct: 243 SVMHDDVIYFEDEDQNIQVEVAMQATEDLQG-SIHAFANNINTREGGTHLTGFKTALTRV 301
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N G ++ + D D +L+GE +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ +
Sbjct: 302 VNDYGNENNLLGDIDGNLTGEDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVEGA 361
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
+ E L Y E HPD +I+ K++ A KA AA++A +L R+KS L S+SLPGKLADC +
Sbjct: 362 MHEQLGTYFEEHPDTAQAIVLKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQT 421
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
PEE+E+FI EGDSAGGSAKQ R+ FQ ++ P++ I
Sbjct: 422 KDPEEAELFIAEGDSAGGSAKQARNPEFQAVL-PIKGKIL 460
>gi|254478916|ref|ZP_05092278.1| DNA gyrase, B subunit [Carboxydibrachium pacificum DSM 12653]
gi|214035138|gb|EEB75850.1| DNA gyrase, B subunit [Carboxydibrachium pacificum DSM 12653]
Length = 654
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 239/466 (51%), Positives = 324/466 (69%), Gaps = 16/466 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+TY + QIQ+LEGLEAVRKRP MYIGSTG RGLHHLVYE++DN++DEA AGY NI V +
Sbjct: 26 ETYTASQIQILEGLEAVRKRPGMYIGSTGSRGLHHLVYEVVDNSIDEALAGYCKNIVVTI 85
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DNS++V D+GRGIP D+HP K A+E LT+LHAGGKF ++ Y VSGGLHGVG+S
Sbjct: 86 HKDNSITVEDDGRGIPTDIHPKVGKPAVEVALTMLHAGGKF--NNDAYKVSGGLHGVGVS 143
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALSE LEV V + G + Q Y RG P T L + + GT I F PDK++F
Sbjct: 144 VVNALSERLEVIVKQRGKVFRQVYERGVPKTPLEV----IGETEETGTIITFKPDKEIFE 199
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
I FD++ +A R+RELAFLN + I L E D ++ +N + GGL +V++LN +K
Sbjct: 200 -EIVFDYDILAQRLRELAFLNKGINIKLIDE-RDGKEEVFN---YEGGLIAFVKYLNRNK 254
Query: 315 KPLHD--VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
+ LH+ + K+ D +++ +Q+ +D+Y++ + +AN+I T +GGTH+ G K++LT+
Sbjct: 255 EVLHEEPIYMEAKNTD-YEVEVCMQY-NDSYNENIYSFANNIDTKEGGTHLIGFKSALTK 312
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N KK +KD + +L GE VREGLT I+SV++ NP+FEGQTKTRLGNPE+R +V+
Sbjct: 313 VINDYAKKYGMIKDGEKNLQGEDVREGLTAIVSVKLKNPQFEGQTKTRLGNPEMRSIVEG 372
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
V E L+ YLE +P V I+ K+L A +A AA++AR+L R+KS L +++LPGKLADCS
Sbjct: 373 VVTEKLSAYLEENPSVARIIVEKALQAARAREAARKARELTRRKSALENTALPGKLADCS 432
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P + E+FIVEGDSAGGSAK GR+ RFQ I+ PL+ I A
Sbjct: 433 EKDPSKCELFIVEGDSAGGSAKAGRNSRFQAIL-PLRGKILNVEKA 477
>gi|417959457|ref|ZP_12602267.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-1]
gi|380333317|gb|EIA23930.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-1]
Length = 582
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 237/461 (51%), Positives = 313/461 (67%), Gaps = 18/461 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QI+VLEGLEAVRKRP MYIGST +GLHHLVYEI+DN++DEA AG+ I + +
Sbjct: 9 YDENQIEVLEGLEAVRKRPGMYIGSTSKKGLHHLVYEIVDNSIDEALAGFCDEITITIND 68
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNS+ + DNGRGIP+ HP KS LE ++TVLHAGGKF G +GY +SGGLHGVG SVV
Sbjct: 69 DNSILIVDNGRGIPVGEHPKLKKSTLEVIMTVLHAGGKFNG--NGYKISGGLHGVGASVV 126
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE V V R G Y Q+Y RGKPV + V + + GT F PDK++FT
Sbjct: 127 NALSERCYVKVSRSGHVYFQEYKRGKPVDS----VKKIGNSMYTGTETYFIPDKEIFTET 182
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
++D + ++ R+RELAFLN + I L +D N E+F++GG+ E+++ +N KK
Sbjct: 183 TEYDFDVLSQRLRELAFLNAGIKINL----NDLRFNNSEEFFYSGGIREFIKHINKGKKA 238
Query: 317 L-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
L DV+ F + + + +A+Q+ +D Y++ +L YAN+I T +GGTH+ G K SLTR +N
Sbjct: 239 LFEDVIFFEHSKNDLNLQIAIQY-TDNYNENILTYANNIFTQEGGTHLVGFKTSLTRCVN 297
Query: 376 SLGKKSKTV----KDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
KK + KD+ SL GE +REGL C++SV++ NP+FEGQTKT+LGN EVR +VD
Sbjct: 298 DYAKKFNYIKESNKDEIKSLIGEDIREGLVCVLSVKMANPQFEGQTKTKLGNSEVRSIVD 357
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+E+L +P++ I K++ A KA AAK+AR+ R KSVL ++LPGKLADC
Sbjct: 358 NIFFNCFSEFLNENPNIGKIICEKAIIAAKAREAAKKARETTR-KSVLDRTALPGKLADC 416
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESI 532
SS PEE EI+IVEGDSAGGSAKQGRDR+FQ I+ PL I
Sbjct: 417 SSKNPEECEIYIVEGDSAGGSAKQGRDRKFQAIL-PLSGKI 456
>gi|319790160|ref|YP_004151793.1| DNA gyrase, B subunit [Thermovibrio ammonificans HB-1]
gi|317114662|gb|ADU97152.1| DNA gyrase, B subunit [Thermovibrio ammonificans HB-1]
Length = 804
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 239/464 (51%), Positives = 315/464 (67%), Gaps = 13/464 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + I+VLEGLEAVRKRP MYIG TG GLHHLV+E++DN+VDEA AGY + IEV +
Sbjct: 8 YDASAIKVLEGLEAVRKRPGMYIGDTGVYGLHHLVFEVVDNSVDEALAGYCTEIEVTIHP 67
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNS++VADNGRGIP+D+HP K A E VLTVLHAGGKF Y SGGLHGVG+SVV
Sbjct: 68 DNSITVADNGRGIPVDIHPEYGKPAAEIVLTVLHAGGKF--EKKAYKYSGGLHGVGVSVV 125
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE L++ + RDG Y Q Y RGKPVT TC V + +++GT I F PD ++F
Sbjct: 126 NALSEWLKLEIHRDGKVYKQVYERGKPVTQFTC----VGTSNKRGTIITFKPDPEIFEVT 181
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+F + +A R+RELAFLN L I L E DP K + +++ GG+ E+V+ +N K P
Sbjct: 182 -EFSWDILANRLRELAFLNKGLKITLTDERVDPPKREV--FYYEGGIVEFVKKINEKKDP 238
Query: 317 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
L + + + D I +++ALQ+ S Y++ + + N+I T +GGTH+ G +++LTR +
Sbjct: 239 LFPEPIYITGEKDDILVEVALQYNS-TYTEQIFSFVNNINTREGGTHVSGFRSALTRAIT 297
Query: 376 SLGKKSKTV-KDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
++ + K+ IS++G+ REGL +ISV+VPNP+FEGQTK +LGN EVR VV V
Sbjct: 298 KFIEEHNLLPKNSKISITGDDTREGLVAVISVKVPNPQFEGQTKAKLGNSEVRPVVASVV 357
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E L YL PD+ I K ++A +A AAKRAR+L R+KS L SLPGKLADCS
Sbjct: 358 YEKLWNYLTERPDIGRKIAEKVITAARAREAAKRARELTRRKSALEEFSLPGKLADCSER 417
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P+++E+F+VEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 418 DPQKTELFLVEGDSAGGSAKQGRDRRFQAIL-PLKGKIINVEKA 460
>gi|255659815|ref|ZP_05405224.1| DNA gyrase, B subunit [Mitsuokella multacida DSM 20544]
gi|260847890|gb|EEX67897.1| DNA gyrase, B subunit [Mitsuokella multacida DSM 20544]
Length = 688
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 238/467 (50%), Positives = 324/467 (69%), Gaps = 13/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+EQIQ+LEGLEAVR RP MYIGST RGLHHLVYE++DN++DEA AGY +I+V
Sbjct: 57 VEADYGAEQIQILEGLEAVRMRPGMYIGSTSERGLHHLVYEVVDNSIDEALAGYCDHIDV 116
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V DNGRGIP+D+H + K A+E VLTVLHAGGKFGG GY VSGGLHGVG
Sbjct: 117 TIHKDNSITVVDNGRGIPVDMH-ESGKPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVG 173
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS S+EV V RDG Y + RG LT + GTR+ F PD ++
Sbjct: 174 VSVVNALSTSMEVQVKRDGKIYEIAFERGVTTKPLTVVG----TTTETGTRVHFMPDPEI 229
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F+ + + T+ R+REL+FLN +TI L E +P +++ ++ F GG+ +V+ LN
Sbjct: 230 FSVTT-YSYETLRHRLRELSFLNHGITIGLHDERVEPVRSE--QFHFDGGISSFVEHLNR 286
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
K+ L+ + + F D +++A+Q+ +D+Y + + + N+I T +GGTH+ G K +LT
Sbjct: 287 KKEVLNPEPIYFNGVKDDTVVEIAMQY-NDSYQENIYSFVNNINTEEGGTHLAGFKLALT 345
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R N +K +KDKD +LSG+ VREGLTC+IS+++ P+FEGQTKT+LGN EVR +VD
Sbjct: 346 RAANDFARKQGILKDKDSNLSGDDVREGLTCVISLKIREPQFEGQTKTKLGNSEVRGIVD 405
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E L+EY + +P + I+ K++ A +A AA++AR+L R+K+ L SSLPGKLADC
Sbjct: 406 SIVTEGLSEYFDENPAITKRIIDKAIMAARAREAARKARELTRRKNALEVSSLPGKLADC 465
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PE++EI++VEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 466 SVKDPEQAEIYLVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNVEKA 511
>gi|189423086|ref|YP_001950263.1| DNA gyrase B subunit [Geobacter lovleyi SZ]
gi|189419345|gb|ACD93743.1| DNA gyrase, B subunit [Geobacter lovleyi SZ]
Length = 802
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/474 (48%), Positives = 324/474 (68%), Gaps = 15/474 (3%)
Query: 68 FKEN--PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAG 125
F++N S YG+ I+VLEGL AVRKRPAMYIGST GLHHLVYEI+DN++DEA AG
Sbjct: 4 FEQNGTAASNEYGAGSIKVLEGLSAVRKRPAMYIGSTASAGLHHLVYEIVDNSIDEALAG 63
Query: 126 YASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVS 185
+ +++ V + D S++V DNGRGIP D+HP +SA E VLTVLHAGGKF S Y VS
Sbjct: 64 HCNDVSVTINTDGSITVVDNGRGIPTDMHPTEGRSAAEVVLTVLHAGGKFDNDS--YKVS 121
Query: 186 GGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIR 245
GGLHGVG+SVVNALS+ L++ + RDG + Q Y RG+P + L + R+GT+I
Sbjct: 122 GGLHGVGVSVVNALSKWLDLEIRRDGKIWRQTYHRGEPQSPLEV----TGTTRRRGTKIT 177
Query: 246 FWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEE 305
F PD+++F T ++ + ++ R+RELAFLN + I + E +D + +++F+ GG+
Sbjct: 178 FMPDEEIFETT-EYSFDVLSQRLRELAFLNAGVRIKINDERAD---GKSHDFFYEGGINS 233
Query: 306 YVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 364
+V++LN K PLH + F+ + G+ +++++Q+ +D Y + + +AN+I T +GGTH+
Sbjct: 234 FVEYLNRAKTPLHQKPIYFKGEKGGVEMEVSMQY-NDTYDEKIFSFANNINTHEGGTHLA 292
Query: 365 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 424
G KA+LTRT+N+ + K+ +++SG+ +REG+TC+ISV++P P+FEGQTKT+LGN
Sbjct: 293 GFKAALTRTMNTYAAGNNLTKNAKVAISGDDLREGMTCVISVKIPQPQFEGQTKTKLGNS 352
Query: 425 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 484
EV+ V+ + E L YLE +P V IL KS+ A +A AA++ARDL R+K L L
Sbjct: 353 EVKGYVESLLNEKLAVYLEENPQVAKRILEKSIEAARAREAARKARDLTRRKGALDLGGL 412
Query: 485 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PGKLADC P E+++VEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 413 PGKLADCQEKDPALCELYLVEGDSAGGSAKQGRDRRFQAIL-PLKGKILNVEKA 465
>gi|384157618|ref|YP_005539691.1| DNA gyrase subunit B [Bacillus amyloliquefaciens TA208]
gi|328551706|gb|AEB22198.1| DNA gyrase subunit B [Bacillus amyloliquefaciens TA208]
Length = 638
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/464 (50%), Positives = 314/464 (67%), Gaps = 11/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I + +
Sbjct: 7 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIEIE 66
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+ + + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 67 KDNSITVKDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 124
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS +L+VTV RDG ++Q Y RG PV L + D+ GT F PD ++F
Sbjct: 125 VNALSTTLDVTVHRDGKIHYQAYERGVPVADLEV----IGDTDKTGTITHFVPDPEIFKE 180
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
+D++ ++ R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 181 TTVYDYDLLSNRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 238
Query: 316 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+H+ + + DGIT+++ALQ+ +D+Y+ + + N+I T +GGTH G K LTR +
Sbjct: 239 VIHEEPIYIEGEKDGITVEVALQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 297
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N ++ K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 298 NDYARRKGIFKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 357
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
L +L +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 358 SSALETFLLENPDSARKIVEKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 417
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 418 DPSISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 460
>gi|308171897|ref|YP_003918602.1| DNA gyrase subunit B [Bacillus amyloliquefaciens DSM 7]
gi|384162410|ref|YP_005543789.1| DNA gyrase subunit B [Bacillus amyloliquefaciens LL3]
gi|384166630|ref|YP_005548008.1| DNA gyrase subunit B [Bacillus amyloliquefaciens XH7]
gi|307604761|emb|CBI41132.1| DNA gyrase (subunit B) [Bacillus amyloliquefaciens DSM 7]
gi|328909965|gb|AEB61561.1| DNA gyrase (subunit B) [Bacillus amyloliquefaciens LL3]
gi|341825909|gb|AEK87160.1| DNA gyrase subunit B [Bacillus amyloliquefaciens XH7]
Length = 640
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/464 (50%), Positives = 314/464 (67%), Gaps = 11/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I + +
Sbjct: 9 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIEIE 68
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+ + + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 69 KDNSITVKDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 126
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS +L+VTV RDG ++Q Y RG PV L + D+ GT F PD ++F
Sbjct: 127 VNALSTTLDVTVHRDGKIHYQAYERGVPVADLEV----IGDTDKTGTITHFVPDPEIFKE 182
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
+D++ ++ R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 183 TTVYDYDLLSNRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 240
Query: 316 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+H+ + + DGIT+++ALQ+ +D+Y+ + + N+I T +GGTH G K LTR +
Sbjct: 241 VIHEEPIYIEGEKDGITVEVALQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 299
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N ++ K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 300 NDYARRKGIFKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 359
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
L +L +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 360 SSALETFLLENPDSARKIVEKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 419
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 420 DPSISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 462
>gi|346226422|ref|ZP_08847564.1| DNA gyrase subunit B [Anaerophaga thermohalophila DSM 12881]
Length = 656
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/470 (49%), Positives = 317/470 (67%), Gaps = 12/470 (2%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
PV Y + IQVLEGLEAVRKRPAMYIG G +GLHHLVYE++DN++DEA AGY ++I
Sbjct: 12 PVENGYKASSIQVLEGLEAVRKRPAMYIGDLGQKGLHHLVYEVVDNSIDEALAGYCTSIV 71
Query: 132 VALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 191
V + D S++V DNGRGIP+D H +SALE V+TVLHAGGKF S Y VSGGLHGV
Sbjct: 72 VTINEDGSITVVDNGRGIPVDFHEKEGRSALEVVMTVLHAGGKFDKDS--YKVSGGLHGV 129
Query: 192 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 251
G+S VNALS +L+ V RDG Y Q+Y +GKP+ + V + D+ GT I F PD
Sbjct: 130 GVSCVNALSSNLKAEVHRDGKIYRQEYQKGKPLAPIE----EVGTTDKTGTWITFMPDSS 185
Query: 252 VFTTAIQFDHNTIAGRIRELAFLNPKLTIALR-KEDSDPEKNQYNEYFFA-GGLEEYVQW 309
+F I+F ++ +A R+RELAFLN L I L K + D E N +E F++ GL E+V +
Sbjct: 186 IFNN-IEFKYSILASRMRELAFLNSGLEIILTDKREKDEEGNFKSERFYSENGLIEFVNF 244
Query: 310 LNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
++ +++ L D + + + I +D+A+ + + ++++ + Y N+I TI+GGTH+ G +
Sbjct: 245 IDGNREKLIDEPIHISTEKNDIPVDIAIVYNT-SFNENVYSYVNNINTIEGGTHLTGFRR 303
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTRTL + +KS + ++G+ REGLT +ISV+V P+FEGQTKT+LGN EV
Sbjct: 304 GLTRTLKNWAEKSGMLSKLKFDINGDDFREGLTAVISVKVAEPQFEGQTKTKLGNSEVSL 363
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
VDQ+V L+ YLE +P +I +K + A A AA++AR+LV++KSVL LPGKL
Sbjct: 364 AVDQAVSTMLSNYLEENPKEAKAIANKVILAATARHAARKARELVQRKSVLSGGGLPGKL 423
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
ADCS PE++EIF+VEGDSAGG+AKQGRDRRFQ I+ PL+ I A
Sbjct: 424 ADCSERDPEQAEIFLVEGDSAGGTAKQGRDRRFQAIL-PLRGKILNVEKA 472
>gi|435848705|ref|YP_007310955.1| DNA gyrase subunit B [Natronococcus occultus SP4]
gi|433674973|gb|AGB39165.1| DNA gyrase subunit B [Natronococcus occultus SP4]
Length = 641
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/458 (50%), Positives = 313/458 (68%), Gaps = 7/458 (1%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ I V++ A
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDARGLHHLVYEVVDNSIDEALAGHCDEITVSIEA 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV VAD+GRGIP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVVVADDGRGIPVDTHDEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LE V RDG + + G+PV + V ++ + GT IRFWPD +F
Sbjct: 125 NALSERLEAEVKRDGGVFRHAFEAGEPVGDME-RVRDMEPDEDTGTEIRFWPDSDIFE-G 182
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+F +T++ R+RELAFLN + I LR E + E Y + GG+ E+V++LN +
Sbjct: 183 DEFSFSTLSSRLRELAFLNSGVRITLRDERQETEDAVAETYEYEGGIREFVEYLNETRAV 242
Query: 317 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
+HD V+ F + I +++A+Q D ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 243 MHDDVIYFEDEEQDIQVEVAMQATEDLQG-SIHAFANNINTREGGTHLTGFKTALTRVVN 301
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
G + D D +L GE +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ ++
Sbjct: 302 DYGNDQGLLGDIDGNLKGEDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESAMH 361
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L Y E HPD ++I+ K++ A KA AA++A +L R+KS L S+SLPGKLADC +
Sbjct: 362 ERLGTYFEEHPDTAEAIVVKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQTKD 421
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
PEE+E+FI EGDSAGGSAKQ R+ FQ ++ P++ I
Sbjct: 422 PEEAELFIAEGDSAGGSAKQARNPEFQAVL-PIKGKIL 458
>gi|23978223|dbj|BAC21109.1| DNA gyrase B subunit [Anabaena cylindrica]
Length = 396
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/401 (58%), Positives = 305/401 (76%), Gaps = 9/401 (2%)
Query: 102 TGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSA 161
TGPRGLHHLVYE++DN+VDEA AG+ +++EV + AD SV+V D+GRGIP+D+HP T KSA
Sbjct: 1 TGPRGLHHLVYEVVDNSVDEALAGHCTHVEVDINADGSVTVTDDGRGIPVDIHPKTGKSA 60
Query: 162 LETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG 221
LETVLTVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD E+ Q+Y R
Sbjct: 61 LETVLTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEFVEVTVWRDNKEHLQRYERS 118
Query: 222 KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIA 281
PVT L V P + R GT I F PD Q+FTT+I+FD+ T++GR+RELA+LN + I
Sbjct: 119 FPVTEL--QVKPY-KEARTGTSITFKPDTQIFTTSIEFDYITLSGRLRELAYLNAGVKII 175
Query: 282 L---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQ 337
R E + + Y + GG++EY+ ++N +K+PLH+ ++ + + + + ++++LQ
Sbjct: 176 FTDHRLELLKSDTPKIEVYEYKGGIKEYIAYMNREKQPLHEEIIYVQGERNNVQVEVSLQ 235
Query: 338 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 397
WC+DAY+D +LG+AN+IRTIDGGTH+EG+KA LTRTLN++ +K +K+ + +LSGEHVR
Sbjct: 236 WCTDAYTDNVLGFANNIRTIDGGTHLEGLKAVLTRTLNAIARKRNKIKEHESNLSGEHVR 295
Query: 398 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 457
EGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE HP + DSIL K++
Sbjct: 296 EGLTAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSFVGEVLTEYLEFHPAIADSILDKAI 355
Query: 458 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEE 498
A KAA AA+ AR+LVR+KSVL SS LPGKLADCSS P E
Sbjct: 356 QAFKAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPSE 396
>gi|384455130|ref|YP_005667723.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|417968034|ref|ZP_12609081.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-co]
gi|418015417|ref|ZP_12654982.1| DNA gyrase, B subunit [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|418371928|ref|ZP_12964026.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-mouse-SU]
gi|345505752|gb|EGX28046.1| DNA gyrase, B subunit [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|346983471|dbj|BAK79147.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|380340308|gb|EIA28918.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-co]
gi|380343027|gb|EIA31447.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-mouse-SU]
Length = 639
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 237/462 (51%), Positives = 313/462 (67%), Gaps = 18/462 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QI+VLEGLEAVRKRP MYIGST +GLHHLVYEI+DN++DEA AG+ I + +
Sbjct: 9 YDENQIEVLEGLEAVRKRPGMYIGSTSKKGLHHLVYEIVDNSIDEALAGFCDEITITIND 68
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNS+ + DNGRGIP+ HP KS LE ++TVLHAGGKF G +GY +SGGLHGVG SVV
Sbjct: 69 DNSILIVDNGRGIPVGEHPKLKKSTLEVIMTVLHAGGKFNG--NGYKISGGLHGVGASVV 126
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE V V R G Y Q+Y RGKPV + V + + GT F PDK++FT
Sbjct: 127 NALSERCYVKVSRSGHVYFQEYKRGKPVDS----VKKIGNSMYTGTETYFIPDKEIFTET 182
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
++D + ++ R+RELAFLN + I L +D N E+F++GG+ E+++ +N KK
Sbjct: 183 TEYDFDVLSQRLRELAFLNAGIKINL----NDLRFNNSEEFFYSGGIREFIKHINKGKKA 238
Query: 317 L-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
L DV+ F + + + +A+Q+ +D Y++ +L YAN+I T +GGTH+ G K SLTR +N
Sbjct: 239 LFEDVIFFEHSKNDLNLQIAIQY-TDNYNENILTYANNIFTQEGGTHLVGFKTSLTRCVN 297
Query: 376 SLGKKSKTV----KDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
KK + KD+ SL GE +REGL C++SV++ NP+FEGQTKT+LGN EVR +VD
Sbjct: 298 DYAKKFNYIKESNKDEIKSLIGEDIREGLVCVLSVKMANPQFEGQTKTKLGNSEVRSIVD 357
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+E+L +P++ I K++ A KA AAK+AR+ R KSVL ++LPGKLADC
Sbjct: 358 NIFFNCFSEFLNENPNIGKIICEKAIIAAKAREAAKKARETTR-KSVLDRTALPGKLADC 416
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
SS PEE EI+IVEGDSAGGSAKQGRDR+FQ I+ PL I
Sbjct: 417 SSKNPEECEIYIVEGDSAGGSAKQGRDRKFQAIL-PLSGKIM 457
>gi|298372284|ref|ZP_06982274.1| DNA gyrase, B subunit [Bacteroidetes oral taxon 274 str. F0058]
gi|298275188|gb|EFI16739.1| DNA gyrase, B subunit [Bacteroidetes oral taxon 274 str. F0058]
Length = 653
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/469 (49%), Positives = 316/469 (67%), Gaps = 12/469 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++K YG+ IQVLEGLEAVRKRPAMYIG G +GLHHLVYE++DN++DEA AGY NI V
Sbjct: 10 LNKEYGASSIQVLEGLEAVRKRPAMYIGDVGEKGLHHLVYEVVDNSIDEALAGYCKNISV 69
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNSV+V D+GRGIP+D+H KSALE V+TVLHAGGKF S Y VSGGLHGVG
Sbjct: 70 TINKDNSVTVKDDGRGIPVDIHEKEKKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVG 127
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+S VNALS+ L+ V R+G Y Q+YSRG P+ V V + GT I F PDK +
Sbjct: 128 VSCVNALSDYLKAEVCRNGKRYVQEYSRGVPLG----EVKEVGTSSETGTTITFHPDKDI 183
Query: 253 FTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWL 310
F I + ++ + R+RELAFLN +LTI + + + N+ E++ GL E+V+++
Sbjct: 184 FID-IHYKYSILVKRMRELAFLNAGIRLTITDLRSEEEGGANKTEEFYSEQGLREFVKYI 242
Query: 311 NTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
++ ++PL +DV+ D G +++A+ + + +Y++ + Y N+I TI+GGTH+ G + +
Sbjct: 243 DSTREPLINDVIYIDTDKYGTPVEVAMMYNT-SYTENLHSYVNNINTIEGGTHVTGFRTA 301
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
LTRTL +K ++ + +S + REG+T +ISV+V P+FEGQTKT+LGN EV+ +
Sbjct: 302 LTRTLKKYADDNKLLEKTKVEISSDDFREGITAVISVKVAEPQFEGQTKTKLGNDEVKGM 361
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
VD++V E L +LE HP +I+ K + A A AA++AR+LV++KS L LPGKLA
Sbjct: 362 VDRAVGEALNVFLEEHPKEAKTIVEKIILAATARNAARKARELVQRKSPLSGGGLPGKLA 421
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
DCSS EIF+VEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 422 DCSSRDASLCEIFLVEGDSAGGSAKQGRDRNFQAIL-PLRGKILNVEKA 469
>gi|451334850|ref|ZP_21905421.1| DNA gyrase subunit B [Amycolatopsis azurea DSM 43854]
gi|449422697|gb|EMD28069.1| DNA gyrase subunit B [Amycolatopsis azurea DSM 43854]
Length = 655
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/474 (47%), Positives = 317/474 (66%), Gaps = 22/474 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + I VLEGLEAVRKRP MYIGSTG RGLHHLV E++DN+VDEA AGYA+ +EV LLA
Sbjct: 8 YNASSITVLEGLEAVRKRPGMYIGSTGERGLHHLVQEVVDNSVDEAMAGYATKVEVTLLA 67
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D V V D+GRGIP+D+HP K LE VLTVLHAGGKF S Y+VSGGLHGVG+SVV
Sbjct: 68 DGGVRVVDDGRGIPVDIHPKEQKPTLEVVLTVLHAGGKF--DSDSYAVSGGLHGVGVSVV 125
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS L V R G + Q+Y + + + + + GT I FW D +F T
Sbjct: 126 NALSTKLIAEVKRGGHSWRQEY-----IDQIPGELQDLGPAEDTGTVITFWADGSIFETT 180
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKE---DSDPEKNQYNE--------YFFAGGLEE 305
++ TI+ R++E+AFLN LT++LR E D + E++ + Y + GGLE+
Sbjct: 181 T-YNFETISRRLQEMAFLNKGLTLSLRDERVADEETEEDASGQAARVKEKTYCYPGGLED 239
Query: 306 YVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 364
+V+ +N K P+H +V+ F G+ +++A+QW ++ ++ ++ +AN+I T +GGTH E
Sbjct: 240 FVKHINGSKDPIHPNVISFEAKGTGLEVEVAMQW-NNGFTPSVYTFANTINTHEGGTHEE 298
Query: 365 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 424
G +A+LTR +N+ + K +K+KD +L+G+ VREGL I+S+++ P+FEGQTKT+LGN
Sbjct: 299 GFRAALTRVVNAYARDKKLLKEKDANLTGDDVREGLAAIVSIKLSEPQFEGQTKTKLGNS 358
Query: 425 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 484
E + V Q+ E+L ++ E +P +I++KS+S+ A +AA++ARDLVR+K L L
Sbjct: 359 EAKTFVQQTSNEWLADWFERNPTESKTIINKSISSAHARMAARKARDLVRRKGALEIGGL 418
Query: 485 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PGKL DC ST P E E++IVEGDSAGGSAK+GRD +Q I+ P++ I A
Sbjct: 419 PGKLKDCRSTNPSECELYIVEGDSAGGSAKEGRDSMYQAIL-PIRGKIINVEKA 471
>gi|325856512|ref|ZP_08172201.1| DNA gyrase, B subunit [Prevotella denticola CRIS 18C-A]
gi|327313062|ref|YP_004328499.1| DNA gyrase subunit B [Prevotella denticola F0289]
gi|325483481|gb|EGC86454.1| DNA gyrase, B subunit [Prevotella denticola CRIS 18C-A]
gi|326945170|gb|AEA21055.1| DNA gyrase, B subunit [Prevotella denticola F0289]
Length = 657
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/465 (49%), Positives = 317/465 (68%), Gaps = 16/465 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY NIEV +
Sbjct: 10 NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCKNIEVTIN 69
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNSV+V D+GRGIP+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 70 EDNSVTVEDDGRGIPVDEHKKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 127
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS ++ V+RDG Y Q+Y +GKP+ + V ++ GTR +FWPD +FTT
Sbjct: 128 VNALSTHMKSQVFRDGKIYQQEYEKGKPLYPVKV----VGETEKTGTRQQFWPDAGIFTT 183
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY-NEYFFA-GGLEEYVQWLNTD 313
+ F + +A R+RELA+LN + I L DPE + E F A GL+E+V++++
Sbjct: 184 TV-FQWDIVARRMRELAYLNAGIRITLSDLRPDPETGKTRTEVFHAKDGLKEFVRYVDRH 242
Query: 314 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
++ L DV+ + + GI I++A+ + +D Y++ + Y N+I TI+GGTH++G +A+LTR
Sbjct: 243 RQHLFDDVIYLKTEKQGIPIEVAVMYNTD-YTENIHSYVNNINTIEGGTHLQGFRAALTR 301
Query: 373 TLNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
TL + SK ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 302 TLKAYADSDPQISKQIEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSG 361
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
V Q+V E LT+YLE HP+ I +K + A A +AA++AR+ V++K+V+ LPGKL
Sbjct: 362 AVQQAVGEALTDYLEEHPNEAKMICNKVILAATARVAARKARESVQRKNVMSGGGLPGKL 421
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCS+ P++ EIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 422 ADCSNKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAIL-PLRGKIL 465
>gi|384263637|ref|YP_005419344.1| DNA topoisomerase IV subunit B [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|452854068|ref|YP_007495751.1| DNA gyrase (subunit B) [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
gi|380496990|emb|CCG48028.1| DNA topoisomerase IV subunit B [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|452078328|emb|CCP20078.1| DNA gyrase (subunit B) [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
Length = 640
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/464 (50%), Positives = 314/464 (67%), Gaps = 11/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I + +
Sbjct: 9 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIEIE 68
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+ + + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 69 KDNSITVKDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 126
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS +L+VTV RDG ++Q Y RG PV L + D+ GT F PD ++F
Sbjct: 127 VNALSTTLDVTVHRDGKIHYQAYERGVPVADLEV----IGDTDKTGTITHFVPDPEIFKE 182
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
+D++ ++ R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 183 TTVYDYDLLSNRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 240
Query: 316 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+H+ + + DGIT+++ALQ+ +D+Y+ + + N+I T +GGTH G K LTR +
Sbjct: 241 VVHEEPIYIEGEKDGITVEVALQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 299
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N ++ K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 300 NDYARRKGIFKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 359
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
L +L +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 360 SSALETFLLENPDSARKIVEKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 419
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 420 DPSISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 462
>gi|375360696|ref|YP_005128735.1| DNA topoisomerase IV subunit B [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|371566690|emb|CCF03540.1| DNA topoisomerase IV subunit B [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
Length = 640
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/464 (50%), Positives = 314/464 (67%), Gaps = 11/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I + +
Sbjct: 9 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIEIE 68
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+ + + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 69 KDNSITVKDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 126
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS +L+VTV RDG ++Q Y RG PV L + D+ GT F PD ++F
Sbjct: 127 VNALSTTLDVTVHRDGKIHYQAYERGVPVADLEV----IGETDKTGTITHFVPDPEIFKE 182
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
+D++ ++ R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 183 TTVYDYDLLSNRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 240
Query: 316 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+H+ + + DGIT+++ALQ+ +D+Y+ + + N+I T +GGTH G K LTR +
Sbjct: 241 VVHEEPIYIEGEKDGITVEVALQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 299
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N ++ K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 300 NDYARRKGIFKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 359
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
L +L +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 360 SSALETFLLENPDSARKIVEKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 419
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 420 DPSISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 462
>gi|281491407|ref|YP_003353387.1| DNA gyrase subunit B [Lactococcus lactis subsp. lactis KF147]
gi|281375141|gb|ADA64657.1| DNA gyrase, subunit B [Lactococcus lactis subsp. lactis KF147]
Length = 651
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/467 (49%), Positives = 329/467 (70%), Gaps = 10/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA AG+AS+IEV
Sbjct: 11 LADEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALAGFASHIEV 70
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V D+GRGIP+D+ T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 71 FIEPDNSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVG 128
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
SVVNALS L+VTV +DG +Y+Q+Y RG L + DR+GT + F PD ++
Sbjct: 129 SSVVNALSTVLDVTVHKDGQKYYQEYHRGLVGDDLKI----IGETDRRGTTVHFVPDPEI 184
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FT ++FD + +A R+RELAFLN L I+L + EKN+ + + + GG++ YV++LN
Sbjct: 185 FTETVEFDFDKLATRVRELAFLNRGLRISLTDKREGNEKNEVH-FHYEGGIQSYVEYLNE 243
Query: 313 DKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K + + F + ++DGI +++A+Q+ +D Y ++ +AN+I T +GGTH +G + +LT
Sbjct: 244 NKTVIFEPAIFTEGEMDGIAVEVAMQY-TDTYHSVVMSFANNINTHEGGTHEQGFRTALT 302
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R +N+ K++K +K+ + +L+G+ VREGLT +ISV+ PNP+FEGQTKT+LGN EV +V+
Sbjct: 303 RVINNYAKQNKILKENEDNLTGDDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVTGIVN 362
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+ E LT ++ +P V I+ K + A KA +AAKRAR++ R+KS L S+LPGKLADC
Sbjct: 363 KLFAEALTTFMLENPQVARKIVEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLADC 422
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SS PE++E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 423 SSNNPEQTELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 468
>gi|452974104|gb|EME73926.1| DNA gyrase subunit B [Bacillus sonorensis L12]
Length = 637
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 238/464 (51%), Positives = 316/464 (68%), Gaps = 11/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY + I V +
Sbjct: 6 NYDENQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCTEINVEIE 65
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+ + + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 66 KDNSITVRDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 123
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS L+VTV+RDG ++Q+Y RG P L + D GT F PD ++FT
Sbjct: 124 VNALSTELDVTVYRDGKVHYQEYERGVPKADLKV----IGDTDVTGTTTHFKPDPEIFTE 179
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
++D++T+A R+RELAFL + I + ED K + NEY + GG++ YV+ LN ++
Sbjct: 180 TTEYDYDTLATRVRELAFLTKGVKITI--EDKREGKERKNEYCYEGGIKSYVEHLNRSRE 237
Query: 316 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+H+ V DGIT+++ALQ+ +D+Y+ + +AN+I T +GGTH G K LTR +
Sbjct: 238 VIHEEPVYIEGSKDGITVEVALQY-NDSYTSNIYSFANNIHTYEGGTHEAGFKTGLTRVI 296
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +++ K+ D +LSGE VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 297 NDYARRNGVFKENDPNLSGEDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARAITDALF 356
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E L ++L +PD I+ K + A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 357 SEALEKFLLENPDSAKKIVEKGVMAARARMAAKKARELTRRKSALEVSNLPGKLADCSSK 416
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 417 DPTISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 459
>gi|452951124|gb|EME56574.1| DNA gyrase subunit B [Amycolatopsis decaplanina DSM 44594]
Length = 655
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/474 (47%), Positives = 316/474 (66%), Gaps = 22/474 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + I VLEGLEAVRKRP MYIGSTG RGLHHLV E++DN+VDEA AG+A+ +EV LLA
Sbjct: 8 YNASSITVLEGLEAVRKRPGMYIGSTGERGLHHLVQEVVDNSVDEAMAGFATKVEVTLLA 67
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D V V D+GRGIP+D+HP K LE VLTVLHAGGKF S Y+VSGGLHGVG+SVV
Sbjct: 68 DGGVRVVDDGRGIPVDMHPKEQKPTLEVVLTVLHAGGKF--DSDSYAVSGGLHGVGVSVV 125
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS L V R G + Q Y+ P + + + GT I FW D +F T
Sbjct: 126 NALSTKLIAEVKRGGHSWRQVYTDQVP-----GELEDLGPAEDTGTTITFWADGDIFETT 180
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKE---DSDPEKNQYNE--------YFFAGGLEE 305
++ TI+ R++E+AFLN LT++LR E D + E + + Y + GGLE+
Sbjct: 181 T-YNFETISRRLQEMAFLNKGLTLSLRDERVADEETEADASGQAARVKEKTYCYPGGLED 239
Query: 306 YVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 364
+V+ +N K P+H V+ F G+ +++A+QW ++ ++ ++ +AN+I T +GGTH E
Sbjct: 240 FVKHINGSKDPIHASVISFEAKGTGLEVEVAMQW-NNGFTPSVYTFANTINTHEGGTHEE 298
Query: 365 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 424
G +A+LTR +N+ ++ K +K+KD +LSG+ VREGL I+S+++ P+FEGQTKT+LGN
Sbjct: 299 GFRAALTRVVNAYAREKKLLKEKDANLSGDDVREGLAAIVSIKLSEPQFEGQTKTKLGNS 358
Query: 425 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 484
E + V Q+ E+L ++ E +P +I++KS+S+ +A +AA++ARDLVR+K L L
Sbjct: 359 EAKTFVQQTSNEWLADWFERNPTEAKTIINKSISSAQARMAARKARDLVRRKGALEIGGL 418
Query: 485 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PGKL DC ST P E E++IVEGDSAGGSAK+GRD +Q I+ P++ I A
Sbjct: 419 PGKLKDCRSTNPSECELYIVEGDSAGGSAKEGRDSMYQAIL-PIRGKIINVEKA 471
>gi|421729501|ref|ZP_16168631.1| DNA gyrase subunit B [Bacillus amyloliquefaciens subsp. plantarum
M27]
gi|451348605|ref|YP_007447236.1| DNA gyrase subunit B [Bacillus amyloliquefaciens IT-45]
gi|407076471|gb|EKE49454.1| DNA gyrase subunit B [Bacillus amyloliquefaciens subsp. plantarum
M27]
gi|449852363|gb|AGF29355.1| DNA gyrase subunit B [Bacillus amyloliquefaciens IT-45]
Length = 638
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/464 (50%), Positives = 314/464 (67%), Gaps = 11/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I + +
Sbjct: 7 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIEIE 66
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+ + + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 67 KDNSITVKDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 124
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS +L+VTV RDG ++Q Y RG PV L + D+ GT F PD ++F
Sbjct: 125 VNALSTTLDVTVHRDGKIHYQAYERGVPVADLEV----IGETDKTGTITHFVPDPEIFKE 180
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
+D++ ++ R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 181 TTVYDYDLLSNRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 238
Query: 316 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+H+ + + DGIT+++ALQ+ +D+Y+ + + N+I T +GGTH G K LTR +
Sbjct: 239 VVHEEPIYIEGEKDGITVEVALQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 297
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N ++ K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 298 NDYARRKGIFKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 357
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
L +L +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 358 SSALETFLLENPDSARKIVEKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 417
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 418 DPSISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 460
>gi|387896530|ref|YP_006326826.1| DNA gyrase subunit B [Bacillus amyloliquefaciens Y2]
gi|429503537|ref|YP_007184721.1| DNA gyrase subunit B [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
gi|387170640|gb|AFJ60101.1| DNA gyrase subunit B [Bacillus amyloliquefaciens Y2]
gi|429485127|gb|AFZ89051.1| DNA gyrase subunit B [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
Length = 638
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/464 (50%), Positives = 314/464 (67%), Gaps = 11/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY ++I + +
Sbjct: 7 SYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIEIE 66
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+ + + A+E ++TVLHAGGKF GS GY VSGGLHGVG SV
Sbjct: 67 KDNSITVKDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASV 124
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS +L+VTV RDG ++Q Y RG PV L + D+ GT F PD ++F
Sbjct: 125 VNALSTTLDVTVHRDGKIHYQAYERGVPVADLEV----IGDTDKTGTITHFVPDPEIFKE 180
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
+D++ ++ R+RELAFL + I + ED + + NEY + GG++ YV++LN K+
Sbjct: 181 TTVYDYDLLSNRVRELAFLTKGVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKE 238
Query: 316 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+H+ + + DGIT+++ALQ+ +D+Y+ + + N+I T +GGTH G K LTR +
Sbjct: 239 VVHEEPIYIEGEKDGITVEVALQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVI 297
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N ++ K+ D +LSG+ VREGLT IIS++ P+P+FEGQTKT+LGN E R + D
Sbjct: 298 NDYARRKGIFKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLF 357
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
L +L +PD I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS
Sbjct: 358 SSALETFLLENPDSARKIVEKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSK 417
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 418 DPSISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 460
>gi|433638427|ref|YP_007284187.1| DNA gyrase, B subunit [Halovivax ruber XH-70]
gi|433290231|gb|AGB16054.1| DNA gyrase, B subunit [Halovivax ruber XH-70]
Length = 643
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 237/463 (51%), Positives = 322/463 (69%), Gaps = 9/463 (1%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +I V
Sbjct: 4 EREYGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCEDITVT 63
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ D SVSV D+GRGIP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+
Sbjct: 64 IHEDGSVSVVDDGRGIPVDTHEEYDRPALEVILTVLHAGGKF--DSKSYQVSGGLHGVGV 121
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE LEVTV RDG Y + RG+P + V D+ + GT IRFWPD Q+F
Sbjct: 122 SVVNALSERLEVTVTRDGGIYEHGFDRGEPDGEME-QVGEPDASNETGTSIRFWPDDQIF 180
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKE-DSDPEKNQYNEYF-FAGGLEEYVQWLN 311
T ++F + T++ R+RELAFLN + I LR E + D E E F + GG+ E+V+++N
Sbjct: 181 ET-LEFSYATLSNRLRELAFLNSGVAITLRDEREVDDEGVIVQETFEYDGGIREFVEYIN 239
Query: 312 TDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 370
+ PLH DVV F + I +++A+Q ++ ++ +AN+I T +GGTH+ G K +L
Sbjct: 240 ETRSPLHRDVVYFTDEDQSIQVEVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTAL 298
Query: 371 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
TR +N ++ + D D +L GE +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V
Sbjct: 299 TRVVNDYANENDLLSDLDENLKGEDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIV 358
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
+ ++ + L Y E +PD +I+ K++ A KA AAK+A +L R+KS L S++LPGKLAD
Sbjct: 359 EGAMHDGLATYFEENPDTAQAIVLKAVEAAKARKAAKQAEELTRRKSALDSTALPGKLAD 418
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
C + P+E+E+FI EGDSAGGSAKQ R+ +Q I+ P++ I
Sbjct: 419 CQTRDPDEAELFIAEGDSAGGSAKQARNPDYQAIL-PIKGKIL 460
>gi|57233676|ref|YP_180759.1| DNA gyrase, B subunit [Dehalococcoides ethenogenes 195]
gi|57224124|gb|AAW39181.1| DNA gyrase, B subunit [Dehalococcoides ethenogenes 195]
Length = 642
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 241/466 (51%), Positives = 312/466 (66%), Gaps = 14/466 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + IQVLEGL AVRKRP MYIGST RGLHHLVYEI+ N+VDEA AG I+V
Sbjct: 13 AENYNASDIQVLEGLAAVRKRPGMYIGSTDQRGLHHLVYEIVYNSVDEAMAGVCDRIKVI 72
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ D SVSV DNGRGIPID+HP T SALETV+TVLHAG KFGG + Y VSGGLHGVG
Sbjct: 73 IYKDGSVSVEDNGRGIPIDIHPVTKISALETVMTVLHAGAKFGGKT--YQVSGGLHGVGA 130
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNAL+E V V R+G Y Q Y RGKP T L V D GT F D Q+F
Sbjct: 131 SVVNALAEWTTVKVRRNGKIYQQSYQRGKPSTPLE----EVGVSDGSGTTTIFKADSQIF 186
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
+T ++D T+ R+RE+A+LN L + + E SD E+ Y+F GG+ +V+ LN +
Sbjct: 187 STT-EYDFETLTDRLREIAYLNKGLEVYIYDEQSDQERT----YYFEGGITGFVRHLNRN 241
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
++ H + K D +++A+Q+ +D YSD+ L +AN + TIDGGTH+ G +++LTR
Sbjct: 242 REVRHRQPIYITKKSDSTILEVAIQY-NDGYSDSTLTFANCVNTIDGGTHLTGFRSALTR 300
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
N KSK +KD D +L G+ VREG+ I+SV++P P+FEGQTK +LGN E++ V+
Sbjct: 301 AFNDYAHKSKFLKDTDPNLMGDDVREGIVAIVSVKLPEPQFEGQTKGKLGNIEIKSFVES 360
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+V E L+ YLE HPD IL K ++A KA AA++ARDL+ +KS L + +LPGKLADCS
Sbjct: 361 AVTEQLSLYLEEHPDDTKRILEKCITAAKAREAARKARDLIIRKSALDTGTLPGKLADCS 420
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
E+F+VEGDSAGGSAKQGR+RRFQ I+ PL+ I A
Sbjct: 421 ERDASLCELFLVEGDSAGGSAKQGRNRRFQAIL-PLRGKILNVEKA 465
>gi|187250428|ref|YP_001874910.1| DNA gyrase subunit B [Elusimicrobium minutum Pei191]
gi|186970588|gb|ACC97573.1| DNA gyrase, B subunit [Elusimicrobium minutum Pei191]
Length = 825
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/483 (48%), Positives = 321/483 (66%), Gaps = 23/483 (4%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
TE KE K Y S +IQVLEGLEAVRKRPAMYIGSTG GLHHLVYE++DN+VDE A
Sbjct: 2 TEEVKEKE-QKNYDSSKIQVLEGLEAVRKRPAMYIGSTGLPGLHHLVYEVVDNSVDEILA 60
Query: 125 GYASNIEVALLADNSVSVADNGRGIPIDLHPATN--------KSALETVLTVLHAGGKFG 176
G A+ I V + D + SVAD+GRGIP+D P N KSALE V+TVLHAGGKF
Sbjct: 61 GGATKISVTIKDDMTCSVADDGRGIPVD--PMVNAKDPKLKGKSALEVVMTVLHAGGKF- 117
Query: 177 GSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDS 236
S Y VSGGLHGVG+S VNALSE LEV V +DG +Y Q+Y RGKP V + +
Sbjct: 118 -DSGAYKVSGGLHGVGVSCVNALSEYLEVVVNKDGKQYFQRYHRGKPEE----KVKEIGA 172
Query: 237 KDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE 296
+GT + F D ++F + F ++TIA R+RELAFLN + I L E D K +
Sbjct: 173 AKEKGTTVTFKADTEIFG-ELSFSYDTIANRLRELAFLNAGVKIILTDERGDEPKT--HT 229
Query: 297 YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIR 355
+F+ GG+ ++V+++N++K LH + + K+++ I A+Q+ +D+YS+ + + N+I
Sbjct: 230 FFYEGGISQFVKYINSNKTTLHAEPIYLTKEINNNYISFAIQY-NDSYSENIYSFVNNIN 288
Query: 356 TIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEG 415
TI+GGTH+ G ++SLTR +N K + +K+K+++++G+ +REGLT ++SV++P+P+FEG
Sbjct: 289 TIEGGTHLSGFRSSLTRVINEYIKDNGLLKNKEVNVTGDDMREGLTAVLSVKIPHPQFEG 348
Query: 416 QTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQ 475
QTKT+LGN E+ +V V + LT + E +P ++ K + A A AA++ARDL R+
Sbjct: 349 QTKTKLGNSEIEGIVRSMVGDALTTFFEENPKTAKAVCEKCIGAAVAREAARKARDLTRR 408
Query: 476 KSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAF 535
KS L LPGKLADC E E+FIVEG+SAGGSAKQGRDR FQ I+ PL+ +
Sbjct: 409 KSALEGGGLPGKLADCQERVAERCELFIVEGNSAGGSAKQGRDRVFQAIL-PLRGKVLNV 467
Query: 536 ASA 538
A
Sbjct: 468 EKA 470
>gi|15672887|ref|NP_267061.1| DNA gyrase subunit B [Lactococcus lactis subsp. lactis Il1403]
gi|385830443|ref|YP_005868256.1| DNA gyrase subunit B [Lactococcus lactis subsp. lactis CV56]
gi|418038398|ref|ZP_12676730.1| DNA topoisomerase (ATP-hydrolyzing) [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|12723837|gb|AAK05003.1|AE006324_6 DNA gyrase subunit B [Lactococcus lactis subsp. lactis Il1403]
gi|326406451|gb|ADZ63522.1| DNA gyrase subunit B [Lactococcus lactis subsp. lactis CV56]
gi|354693409|gb|EHE93178.1| DNA topoisomerase (ATP-hydrolyzing) [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|374672965|dbj|BAL50856.1| DNA gyrase subunit B [Lactococcus lactis subsp. lactis IO-1]
Length = 651
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/467 (49%), Positives = 329/467 (70%), Gaps = 10/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA AG+AS+IEV
Sbjct: 11 LADEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALAGFASHIEV 70
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V D+GRGIP+D+ T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 71 FIEPDNSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVG 128
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
SVVNALS L+VTV +DG +Y+Q+Y RG L + DR+GT + F PD ++
Sbjct: 129 SSVVNALSTVLDVTVHKDGQKYYQEYHRGLVGDDLKI----IGETDRRGTTVHFVPDPEI 184
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FT ++FD + +A R+RELAFLN L I+L + EKN+ + + + GG++ YV++LN
Sbjct: 185 FTETVEFDFDKLATRVRELAFLNRGLRISLTDKREGNEKNEVH-FHYEGGIQSYVEYLNE 243
Query: 313 DKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K + + F + ++DGI +++A+Q+ +D Y ++ +AN+I T +GGTH +G + +LT
Sbjct: 244 NKTVIFEPAIFTEGEMDGIAVEVAMQY-TDTYHSVVMSFANNINTHEGGTHEQGFRTALT 302
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R +N+ K++K +K+ + +L+G+ VREGLT +ISV+ PNP+FEGQTKT+LGN EV +V+
Sbjct: 303 RVINNYAKQNKILKENEDNLTGDDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVTGIVN 362
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+ E LT ++ +P V I+ K + A KA +AAKRAR++ R+KS L S+LPGKLADC
Sbjct: 363 KLFAEALTTFMLENPQVARKIVEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLADC 422
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SS PE++E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 423 SSNNPEQTELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 468
>gi|326802621|ref|YP_004320439.1| DNA gyrase subunit B [Aerococcus urinae ACS-120-V-Col10a]
gi|326650211|gb|AEA00394.1| DNA gyrase, B subunit [Aerococcus urinae ACS-120-V-Col10a]
Length = 660
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 239/463 (51%), Positives = 312/463 (67%), Gaps = 11/463 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + QIQVLEGLEAVRKRP MYIGSTG GLHHLV+EI+DN++DEA AGYA I++ + +
Sbjct: 31 YNASQIQVLEGLEAVRKRPGMYIGSTGAPGLHHLVWEIVDNSIDEALAGYADKIDIKIES 90
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D S++V DNGRGIP+D+ T + A+ETV TVLHAGGKFGG S LHGVG SVV
Sbjct: 91 DGSITVIDNGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGASVV 148
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS L V V+RDG Y Q+YSRG V+ L V D+ GT + F D ++FT
Sbjct: 149 NALSTKLRVEVYRDGKIYQQEYSRGHIVSDLKV----VGESDKTGTVVNFVADPEIFTDT 204
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+D T+ R+RELAFLN L I L ED E +Q Y + GG++EYVQ+LN +K+
Sbjct: 205 TDYDFQTLNKRVRELAFLNKGLHITL--EDRREEDSQEVAYQYEGGIKEYVQYLNENKEI 262
Query: 317 L-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
L + V +D I +++A Q+ + Y + +AN+I T +GGTH G+K +LTRT+N
Sbjct: 263 LFEEPVYLEGQMDDIEVEVAFQYTA-GYHSNFMSFANNIHTFEGGTHESGIKTALTRTIN 321
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+ +K+KD +LSGE VREGLT I+S+R PNP+FEGQTK +LGN EVR + D+
Sbjct: 322 DYARSQNLLKEKDDNLSGEDVREGLTLIVSIRHPNPQFEGQTKMKLGNSEVRTITDRLFG 381
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
++L ++L P++ I+ K + A KA AAKRAR++ R+KS L S+LPGKLADCSS
Sbjct: 382 QHLEQFLYETPNIARQIVDKGILASKARQAAKRAREMTRKKSGLEISNLPGKLADCSSRV 441
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PEE E+FIVEG+SAGGSAK GRDR FQ I+ P++ I A
Sbjct: 442 PEECELFIVEGNSAGGSAKLGRDRHFQAIL-PIRGKILNVEKA 483
>gi|448317100|ref|ZP_21506658.1| DNA gyrase subunit B [Natronococcus jeotgali DSM 18795]
gi|445604524|gb|ELY58471.1| DNA gyrase subunit B [Natronococcus jeotgali DSM 18795]
Length = 643
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/460 (50%), Positives = 319/460 (69%), Gaps = 9/460 (1%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +I V + A
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDARGLHHLVYEVVDNSIDEALAGHCDDITVTIEA 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV VAD+GRGIP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVLVADDGRGIPVDTHDEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LE V RDG + + G+PV + V ++ + GT IRFWPD +F T
Sbjct: 125 NALSERLEAEVKRDGGVFRHAFEGGEPVGDME-RVRDMEPDEETGTEIRFWPDGDIFETG 183
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALR--KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
+F +T++ R+RELAFLN + I LR +E++D Y + GG+ E+V++LN +
Sbjct: 184 -EFSFSTLSSRLRELAFLNSGVRITLRDEREETDDGAAVEETYEYEGGIREFVEYLNETR 242
Query: 315 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+HD V+ F + + + +++A+Q D ++ +AN+I T +GGTH+ G K +LTR
Sbjct: 243 AVMHDDVIYFEGEDENVQVEVAMQATEDLQG-SIHAFANNINTREGGTHLTGFKTALTRV 301
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N G + + D D +L GE +REGLT +ISV+ P+P+FEGQTKT+LGN EVR VV+ +
Sbjct: 302 VNDYGNERNLLGDVDGNLKGEDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGVVEGA 361
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
+ E L Y E HPD ++I++K++ A KA AA++A +L R+KS L S+SLPGKLADC +
Sbjct: 362 MHEQLGTYFEEHPDTAEAIVAKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQT 421
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P+E+E+FI EGDSAGGSAKQ R+ FQ I+ P++ I
Sbjct: 422 RDPDEAELFIAEGDSAGGSAKQARNPEFQAIL-PIKGKIL 460
>gi|401563979|ref|ZP_10804902.1| DNA gyrase, B subunit [Selenomonas sp. FOBRC6]
gi|400189260|gb|EJO23366.1| DNA gyrase, B subunit [Selenomonas sp. FOBRC6]
Length = 684
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 241/467 (51%), Positives = 319/467 (68%), Gaps = 13/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLVYE++DN++DEA AGY +EV
Sbjct: 53 VDADYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVYEVVDNSIDEALAGYCDTVEV 112
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V DNGRGIP+D+H + A+E VLTVLHAGGKFGG GY VSGGLHGVG
Sbjct: 113 VIHGDNSITVTDNGRGIPVDMHE-SGMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVG 169
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS +++V V RDG + ++RG VT H + + + GTR+ F PD ++
Sbjct: 170 VSVVNALSSTMDVEVRRDGEIHAISFARG--VTQEKLHT--IGTCETTGTRVHFVPDPEI 225
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FT + T+ R+RELAFLN +TI L D E+ + + F GG+ +V LN
Sbjct: 226 FTVTT-YSFETLKHRLRELAFLNHGITITLV--DERGEEERRETFHFDGGIRSFVAHLNR 282
Query: 313 DKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
K+ +++ + F D +++A+Q+ +D+Y + + + N+I T +GGTH+ G K +LT
Sbjct: 283 KKETINEEPIYFNGVKDDTVVEIAMQY-NDSYQENIYSFVNNINTEEGGTHLAGFKIALT 341
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R N ++ +KDKD +LSGE VREGLTC+IS++V P+FEGQTKT+LGN EVR +VD
Sbjct: 342 RAANDFARRLNVLKDKDGNLSGEDVREGLTCVISLKVREPQFEGQTKTKLGNSEVRGIVD 401
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E L EY E +P V +L K+L A +A AA++AR+L R+K+ L SSLPGKLADC
Sbjct: 402 SIVTEGLMEYFEENPAVTKRVLDKALMASRAREAARKARELTRRKNALEVSSLPGKLADC 461
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P++ EI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 462 SVKDPDQCEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNVEKA 507
>gi|210624032|ref|ZP_03294149.1| hypothetical protein CLOHIR_02101 [Clostridium hiranonis DSM 13275]
gi|210153239|gb|EEA84245.1| hypothetical protein CLOHIR_02101 [Clostridium hiranonis DSM 13275]
Length = 633
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 248/462 (53%), Positives = 325/462 (70%), Gaps = 12/462 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ QIQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN++DEA AG S I V
Sbjct: 1 MKQEYGASQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGNCSKIYV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
A+ AD S++V D+GRGIP+++HP T S LETVLTVLHAGGKFGG S LHGVG
Sbjct: 61 AINADGSITVEDDGRGIPVEVHPKTGLSTLETVLTVLHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE L V RDG Y Q+Y +G P T L V D GT I F PD +V
Sbjct: 119 VSVVNALSEWLVAEVHRDGKAYRQEYKKGNPQTKLEV----VGESDHTGTIISFMPDAEV 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F I+F +T+ R+REL+FLN + I ED K +Y ++ + GGL EYV++LN
Sbjct: 175 FD-EIEFSFDTLEYRLRELSFLNKGIKIIF--EDKREGKEKYRDFHYTGGLVEYVKFLNK 231
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+ +H D+V K VD +++A+Q+ +D Y++ + +AN+I T +GG+H+ G KA+LT
Sbjct: 232 SRTGIHEDIVYIDKKVDDCLVEIAMQY-TDGYTENIYSFANNINTHEGGSHLAGFKAALT 290
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
+T+N K++ +KDKD +LSGE +REGLT ++SV++P+P+FEGQTKT+LGN +R +VD
Sbjct: 291 KTINEYAKRNGALKDKDSNLSGEDIREGLTAVVSVKLPDPQFEGQTKTKLGNTFMRGIVD 350
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
E L +LE +P+ I+ K+L A +A AAKRAR+L R+KSVL S+SLPGKLADC
Sbjct: 351 GVTVEELGSFLEENPNTAKVIVDKALRAQRAREAAKRARELTRRKSVLESTSLPGKLADC 410
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
S P +SEIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 411 SEKDPSKSEIFLVEGDSAGGSAKQGRDRNTQAIL-PLRGKIL 451
>gi|347541857|ref|YP_004856493.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-rat-Yit]
gi|346984892|dbj|BAK80567.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-rat-Yit]
Length = 639
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 237/462 (51%), Positives = 315/462 (68%), Gaps = 18/462 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QI+VLEGLEAVRKRP MYIGST +GLHHLVYEI+DN++DEA AG+ I + +
Sbjct: 9 YDENQIEVLEGLEAVRKRPGMYIGSTSKKGLHHLVYEIVDNSIDEALAGFCDQISITINK 68
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNS+ ++DNGRGIP+ HP KS LE ++TVLHAGGKF G +GY +SGGLHGVG SVV
Sbjct: 69 DNSILISDNGRGIPVGEHPKLKKSTLEVIMTVLHAGGKFNG--NGYKISGGLHGVGASVV 126
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE V V R G Y Q+YSRGKP+ V V GT F PDK++FT
Sbjct: 127 NALSEKCYVKVKRGGDIYFQEYSRGKPID----DVKKVGRTTENGTETFFIPDKEIFTET 182
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+++D + ++ R+RELAFLN + I+L D +N +F+ GG++E+V+ +N K+
Sbjct: 183 VEYDFDVLSQRLRELAFLNAGIRISLIDLRFDKSEN----FFYIGGVKEFVKHINKGKEC 238
Query: 317 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
L DV+ F + + + +A+Q+ +D+Y++ +L Y N+I T +GGTH+ G K SLTR +N
Sbjct: 239 LFDDVIYFEHSKNDLNLQIAMQY-TDSYNENVLTYVNNIFTQEGGTHLIGFKTSLTRCVN 297
Query: 376 SLGKKSKTV----KDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
KK + KD+ SL GE +REGL C++SV++PNP+FEGQTKT+LGN EVR +VD
Sbjct: 298 DYAKKFNYIKEHNKDEIKSLIGEDIREGLVCVLSVKIPNPQFEGQTKTKLGNSEVRSIVD 357
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+E+L +P++ + K++ A KA AAK+AR+ R KSVL +SLPGKLADC
Sbjct: 358 SIFFNCFSEFLNENPNIGKIVCEKAIIAAKAREAAKKARETTR-KSVLDRTSLPGKLADC 416
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
SS PEE EI+IVEGDSAGGSAKQGRDR+FQ I+ PL I
Sbjct: 417 SSKNPEECEIYIVEGDSAGGSAKQGRDRKFQAIL-PLAGKIM 457
>gi|452207169|ref|YP_007487291.1| DNA gyrase subunit B [Natronomonas moolapensis 8.8.11]
gi|452083269|emb|CCQ36556.1| DNA gyrase subunit B [Natronomonas moolapensis 8.8.11]
Length = 639
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 236/458 (51%), Positives = 319/458 (69%), Gaps = 9/458 (1%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + QIQVLEGLEAV+KRPAMYIGST RGLHHLVYE++DN++DEA AG+ IEV +
Sbjct: 7 YSAGQIQVLEGLEAVQKRPAMYIGSTDGRGLHHLVYEVVDNSIDEALAGHCDAIEVRINE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSV D+GRGIP+D H ++ A+E ++TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVVDDGRGIPVDTHEEYDRPAVEVIMTVLHAGGKF--DSKSYQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS+ LEV + RDG + ++ G+P + V ++ + GT IRFWPD +F T
Sbjct: 125 NALSKWLEVEIKRDGAVWRHRFDHGEPEADIE-RVREMNPGEGTGTEIRFWPDGDIFETT 183
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
F+++T+ R+RELAFLNP + IALR E SD N EY GG+ E+V +LN ++
Sbjct: 184 -AFEYSTLESRLRELAFLNPGVEIALRDERSDEGTNSVFEY--EGGIREFVAYLNETREL 240
Query: 317 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LH D+V D D I +++A+Q + ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 241 LHEDIVYVEDDADDIHVEIAMQ-ATAGVQGSIHAFANNINTREGGTHLTGFKTALTRIIN 299
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+ + D D +L GE +REGLT +ISV+ P+P+FEGQTKT+LGN +VR +V+ +V
Sbjct: 300 DYAGSNGLLSDLDGTLKGEDIREGLTAVISVKHPDPQFEGQTKTKLGNSDVRGIVEGAVH 359
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L YLE HPD ++I+SK++ A KA AAK+A +L R+KS L S+SLPGKLADC +
Sbjct: 360 EKLATYLEEHPDTAEAIVSKAVEAAKARKAAKKAEELTRRKSALESTSLPGKLADCRERS 419
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
PE++E+F+ EGDSAGGSAKQGR+ FQ I+ P++ I
Sbjct: 420 PEDAELFVTEGDSAGGSAKQGRNPEFQAIL-PIRGKIL 456
>gi|380693260|ref|ZP_09858119.1| DNA gyrase subunit B [Bacteroides faecis MAJ27]
Length = 653
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/471 (48%), Positives = 318/471 (67%), Gaps = 13/471 (2%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
P + +Y ++ IQVLEGLEAVRKRPAMYIG +GLHHLVYEI+DN++DEA AGY +IE
Sbjct: 8 PNNGSYSADSIQVLEGLEAVRKRPAMYIGDISVKGLHHLVYEIVDNSIDEALAGYCDHIE 67
Query: 132 VALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 191
V + DNS++V DNGRGIP+D H KSALE +TVLHAGGKF S Y VSGGLHGV
Sbjct: 68 VTINEDNSITVQDNGRGIPVDYHEKEKKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGV 125
Query: 192 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 251
G+S VNALS + V+RDG Y Q+Y GKP+ + V V D GTR +FWPD
Sbjct: 126 GMSCVNALSTHMTTQVFRDGKIYQQEYEIGKPLYS----VKEVGVSDITGTRQQFWPDDT 181
Query: 252 VFTTAIQFDHNTIAGRIRELAFLNPKLTIAL--RKEDSDPEKNQYNEYFFAG-GLEEYVQ 308
+FT + +D+ +A R+RELA+LN L I+L R+ ++ + + +E F++ GL E+V+
Sbjct: 182 IFTETV-YDYKILAARLRELAYLNAGLRISLTDRRVVNEEDGSFKSEVFYSEEGLREFVR 240
Query: 309 WLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
++ + ++ L +DV+ + GI I++A+ + + +S+ + Y N+I TI+GGTH+ G +
Sbjct: 241 FIESSREHLINDVIYLNSEKQGIPIEIAIMYNT-GFSENVHSYVNNINTIEGGTHLAGFR 299
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
+LTRTL + SK ++ + +SG+ REGLT +ISV+V P+FEGQTKT+LGN EV
Sbjct: 300 RALTRTLKKYAEDSKMLEKVKVEISGDDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVM 359
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
VDQ+V E L YLE HP +I+ K + A A AA++AR++V++KS + LPGK
Sbjct: 360 GAVDQAVGEVLAYYLEEHPKEAKTIVDKVILAATARHAARKAREMVQRKSPMSGGGLPGK 419
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LADCS P + E+F+VEGDSAGG+AKQGR+R FQ I+ PL+ I A
Sbjct: 420 LADCSDKDPSKCELFLVEGDSAGGTAKQGRNRMFQAIL-PLRGKILNVEKA 469
>gi|284161217|ref|YP_003399840.1| DNA gyrase subunit beta [Archaeoglobus profundus DSM 5631]
gi|284011214|gb|ADB57167.1| DNA gyrase, B subunit [Archaeoglobus profundus DSM 5631]
Length = 632
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 239/473 (50%), Positives = 315/473 (66%), Gaps = 23/473 (4%)
Query: 72 PVSKT------YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAG 125
P+S T Y +E I+VL+ ++AVRKRP MY+GSTG RG HHL++EI+DN++DEA AG
Sbjct: 2 PISSTFLAMSDYTAEAIEVLDDIQAVRKRPGMYVGSTGSRGFHHLLWEIVDNSIDEALAG 61
Query: 126 YASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVS 185
Y + I V L D S SV DNGRGIP++ HP K ALE V+T LHAGGKF S Y VS
Sbjct: 62 YCNRIVVTLHKDGSASVEDNGRGIPVEEHPIFKKPALEIVMTKLHAGGKF--SKKAYKVS 119
Query: 186 GGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIR 245
GGLHGVGLSVVNALSE LEV V R+G Y+Q+Y RGKPVT L V GT+IR
Sbjct: 120 GGLHGVGLSVVNALSEWLEVWVKRNGKIYYQRYERGKPVTPLKV----VGETKETGTKIR 175
Query: 246 FWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEE 305
F PD ++F +FD++ +A R+RELAFLN L I L E + K Y+E G
Sbjct: 176 FKPDPEIFEVK-EFDYDVVAERLRELAFLNKGLRIKLIDERTGKVKEFYSEEGIVG---- 230
Query: 306 YVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 365
+V++LN K + DVV + +GI +++A Q+ ++ + + +L +AN+I TI+GGTH+ G
Sbjct: 231 FVKYLNKGKDVITDVVYISGEKNGINVEIAFQFTNEDF-ENLLAFANNIHTIEGGTHVSG 289
Query: 366 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 425
+A LTR +N GKK VK K +SG +REGLT ++SV+VP P+FEGQTKT+L N +
Sbjct: 290 FRAGLTRAINEYGKKH--VK-KFTPISGSDIREGLTAVLSVKVPEPQFEGQTKTKLTNSD 346
Query: 426 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 485
V+ VV+ V +LE HP I+ K L A+KA A+RAR+LV++K+ + S +LP
Sbjct: 347 VKTVVESLVYNNFLRWLEEHPSEAQRIIEKCLLAMKAREMARRARELVKRKAEI-SLTLP 405
Query: 486 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
GKLADCSS EE E+FIVEG+SAGGSAKQ RDRRFQ ++ P++ I A
Sbjct: 406 GKLADCSSKNVEERELFIVEGESAGGSAKQARDRRFQAVL-PIRGKIINVEKA 457
>gi|290968148|ref|ZP_06559693.1| DNA gyrase, B subunit [Megasphaera genomosp. type_1 str. 28L]
gi|335049908|ref|ZP_08542891.1| DNA gyrase, B subunit [Megasphaera sp. UPII 199-6]
gi|290781823|gb|EFD94406.1| DNA gyrase, B subunit [Megasphaera genomosp. type_1 str. 28L]
gi|333762037|gb|EGL39553.1| DNA gyrase, B subunit [Megasphaera sp. UPII 199-6]
Length = 640
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 239/465 (51%), Positives = 326/465 (70%), Gaps = 11/465 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
K YG+EQIQVLEGLEAVRKRP MYIGST RGLHHLVYE++DN+VDEA AG+ ++IEV +
Sbjct: 7 KDYGAEQIQVLEGLEAVRKRPGMYIGSTSLRGLHHLVYEVVDNSVDEALAGFCTHIEVTI 66
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
ADNS++V+DNGRGIP+ +H K A+E VLTVLHAGGKFGG GY +SGGLHGVG+S
Sbjct: 67 EADNSITVSDNGRGIPVAMHKV-GKPAVEVVLTVLHAGGKFGGD--GYPISGGLHGVGIS 123
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS EV V RD + ++RG LT ++ + GT + F PD ++F
Sbjct: 124 VVNALSIQTEVKVKRDNYLWDISFARGITEKKLT-KTRALEPGEETGTTVHFKPDPEIFP 182
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
+ +D +T+ R+RELAFLN L I L + E N+ Y + GGL +VQ+LN +K
Sbjct: 183 DVV-YDFDTLKTRLRELAFLNKGLHITLT---DNREHNKQEVYCYEGGLISFVQFLNENK 238
Query: 315 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+ +H V+ + + + +D+A+Q+ +D YS+ +L + N I T +GGTH+ G +++LTRT
Sbjct: 239 QAVHPTVIPLDGEKNQVMVDIAMQY-NDGYSENILTFVNDIFTEEGGTHLSGFRSALTRT 297
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N G+ + +K+ + +LSGE VREGLT I+SV+V P+FEGQTKT+LGN EV+ +VD
Sbjct: 298 INDYGRSAGIIKENEDNLSGEDVREGLTAIVSVKVREPQFEGQTKTKLGNSEVKGIVDTL 357
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
V + L E+ HP SI++K+++A +A AA+RAR+L R+K+ L SSLPGKLADCS
Sbjct: 358 VSDGLREFFGEHPVEAKSIVNKTITASRARQAARRARELTRRKNALEISSLPGKLADCSE 417
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
+ E +EI++VEGDSAGGSAKQGRDR+FQ I+ PL+ I A
Sbjct: 418 KSSERTEIYLVEGDSAGGSAKQGRDRKFQAIL-PLRGKIINVEKA 461
>gi|384449466|ref|YP_005662068.1| DNA gyrase subunit B [Chlamydophila pneumoniae LPCoLN]
gi|269303150|gb|ACZ33250.1| DNA gyrase, B subunit [Chlamydophila pneumoniae LPCoLN]
Length = 805
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 238/479 (49%), Positives = 313/479 (65%), Gaps = 22/479 (4%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
+P K Y + I VLEGL+AVR+RP MYIG TG GLHHLVYE++DN++DEA AGY S I
Sbjct: 2 DPKEKNYDASAITVLEGLQAVRERPGMYIGDTGITGLHHLVYEVVDNSIDEAMAGYCSRI 61
Query: 131 EVALLADNSVSVADNGRGIPIDLHPATNK------SALETVLTVLHAGGKFGGSSSGYSV 184
+V +L D + + DNGRGIPI++H + SALE VLTVLHAGGKF S Y V
Sbjct: 62 DVRILEDGGIVIVDNGRGIPIEVHERESAKQGREVSALEVVLTVLHAGGKFDKDS--YKV 119
Query: 185 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 244
SGGLHGVG+S VNALSE L TV++D Y ++SRG PVT L V + DRQGT I
Sbjct: 120 SGGLHGVGVSCVNALSEKLVATVFKDKKCYQMEFSRGIPVTPLEY----VSASDRQGTEI 175
Query: 245 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 304
F+PD ++F+T FD + + R+RELAFLN +TI ++D D ++ +F+ GG++
Sbjct: 176 VFYPDPKIFSTC-TFDRSILMKRLRELAFLNRGITIVF-EDDRDVSFDKVT-FFYEGGIQ 232
Query: 305 EYVQWLNTDKKPLHD----VVGFRKDVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDG 359
+V +LN +K+ L + G R DG I + ALQW S YS+ + YAN+I T G
Sbjct: 233 SFVSYLNQNKESLFSEPIYICGTRVGDDGEIEFEAALQWNS-GYSELVYSYANNIPTRQG 291
Query: 360 GTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKT 419
GTH+ G +LTR +N+ K K+ ++L+GE +REGLT +ISV+VPNP+FEGQTK
Sbjct: 292 GTHLTGFATALTRVINTYIKAHNLAKNNKLALTGEDIREGLTAVISVKVPNPQFEGQTKQ 351
Query: 420 RLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVL 479
+LGN +V V Q V E LT + E +P + I+ K A +A AAK+AR+L +KS L
Sbjct: 352 KLGNSDVSSVAQQVVGEALTIFFEENPQIARMIVDKVFVAAQAREAAKKARELTLRKSAL 411
Query: 480 RSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S+ LPGKL DC PE+ E++IVEGDSAGGSAKQGRDRRFQ I+ P++ I A
Sbjct: 412 DSARLPGKLIDCLEKDPEKCEMYIVEGDSAGGSAKQGRDRRFQAIL-PIRGKILNVEKA 469
>gi|429736495|ref|ZP_19270391.1| DNA gyrase, B subunit [Selenomonas sp. oral taxon 138 str. F0429]
gi|429154931|gb|EKX97638.1| DNA gyrase, B subunit [Selenomonas sp. oral taxon 138 str. F0429]
Length = 685
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 241/467 (51%), Positives = 319/467 (68%), Gaps = 13/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLVYE++DN++DEA AGY +EV
Sbjct: 54 VDADYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVYEVVDNSIDEALAGYCDTVEV 113
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V DNGRGIP+D+H + A+E VLTVLHAGGKFGG GY VSGGLHGVG
Sbjct: 114 VIHKDNSITVTDNGRGIPVDMHE-SGMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVG 170
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS +++V V RDG + ++RG VT H + + + GTR+ F PD ++
Sbjct: 171 VSVVNALSSTMDVEVRRDGEIHAISFARG--VTQKKLHT--IGTCETTGTRVHFVPDPEI 226
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FT + T+ R+RELAFLN +TI L D E+ + + F GG+ +V LN
Sbjct: 227 FTVTT-YSFETLKHRLRELAFLNHGITITLV--DERGEEERRETFHFDGGIRSFVAHLNR 283
Query: 313 DKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
K+ +++ + F D +++A+Q+ +D+Y + + + N+I T +GGTH+ G K +LT
Sbjct: 284 KKETINEEPIYFNGVKDDTVVEIAMQY-NDSYQENIYSFVNNINTEEGGTHLAGFKIALT 342
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R N ++ +KDKD +LSGE VREGLTC+IS++V P+FEGQTKT+LGN EVR +VD
Sbjct: 343 RAANDFARRLNVLKDKDGNLSGEDVREGLTCVISLKVREPQFEGQTKTKLGNSEVRGIVD 402
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E L EY E +P V +L K+L A +A AA++AR+L R+K+ L SSLPGKLADC
Sbjct: 403 SIVTEGLMEYFEENPAVTKRVLDKALMASRAREAARKARELTRRKNALEVSSLPGKLADC 462
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P++ EI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 463 SVKDPDQCEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNVEKA 508
>gi|342731691|ref|YP_004770530.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-mouse-Japan]
gi|342329146|dbj|BAK55788.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-mouse-Japan]
Length = 639
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 237/462 (51%), Positives = 313/462 (67%), Gaps = 18/462 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QI+VLEGLEAVRKRP MYIGST +GLHHLVYEI+DN++DEA AG+ I + +
Sbjct: 9 YDENQIEVLEGLEAVRKRPGMYIGSTSKKGLHHLVYEIVDNSIDEALAGFCDEITITIND 68
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNS+ + DNGRGIP+ HP KS LE ++TVLHAGGKF G +GY +SGGLHGVG SVV
Sbjct: 69 DNSILIVDNGRGIPVGEHPKLKKSTLEVIMTVLHAGGKFNG--NGYKISGGLHGVGASVV 126
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE V V R G Y Q+Y RGKPV + V + + GT F PDK++FT
Sbjct: 127 NALSERCYVKVSRGGHVYFQEYKRGKPVDS----VKKIGNSMYTGTETYFIPDKEIFTET 182
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
++D + ++ R+RELAFLN + I L +D N E+F++GG+ E+++ +N KK
Sbjct: 183 TEYDFDVLSQRLRELAFLNAGIKINL----NDLRFNNSEEFFYSGGIREFIKHINKGKKA 238
Query: 317 L-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
L DV+ F + + + +A+Q+ +D Y++ +L YAN+I T +GGTH+ G K SLTR +N
Sbjct: 239 LFEDVIFFEHSKNDLNLQIAIQY-TDNYNENILTYANNIFTQEGGTHLVGFKTSLTRCVN 297
Query: 376 SLGKKSKTV----KDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
KK + KD+ SL GE +REGL C++SV++ NP+FEGQTKT+LGN EVR +VD
Sbjct: 298 DYAKKFNYIKESNKDEIKSLIGEDIREGLVCVLSVKMANPQFEGQTKTKLGNSEVRSIVD 357
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+E+L +P++ I K++ A KA AAK+AR+ R KSVL ++LPGKLADC
Sbjct: 358 NIFFNCFSEFLNENPNIGKIICEKAIIAAKAREAAKKARETTR-KSVLDRTALPGKLADC 416
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
SS PEE EI+IVEGDSAGGSAKQGRDR+FQ I+ PL I
Sbjct: 417 SSKNPEECEIYIVEGDSAGGSAKQGRDRKFQAIL-PLSGKIM 457
>gi|300711735|ref|YP_003737549.1| DNA topoisomerase II subunit B [Halalkalicoccus jeotgali B3]
gi|448296156|ref|ZP_21486217.1| DNA gyrase subunit B [Halalkalicoccus jeotgali B3]
gi|299125418|gb|ADJ15757.1| DNA topoisomerase II subunit B (DNA gyrase) [Halalkalicoccus
jeotgali B3]
gi|445582879|gb|ELY37219.1| DNA gyrase subunit B [Halalkalicoccus jeotgali B3]
Length = 635
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/458 (50%), Positives = 316/458 (68%), Gaps = 11/458 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVR RPAMYIGST RGLHHLVYE++DNA+DEA AGY I V +
Sbjct: 7 YGAGQIQVLEGLEAVRTRPAMYIGSTDSRGLHHLVYEVVDNAIDEALAGYCDTIGVTIHE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSVAD+GRGIP+D H ++ A+E ++TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVADDGRGIPVDTHAEYDRPAVEVIMTVLHAGGKF--DSKSYQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LEV + RDG +H ++ G P + V +++++ GT +RFWPD +F
Sbjct: 125 NALSERLEVEIRRDGAVWHHRFDHGAPEGDIE-RVRDLEAEEETGTTVRFWPDDGIFEDR 183
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+F +T+ RIRELAFLNP + I L E + E + + GG+ E+V++LN + P
Sbjct: 184 -EFVVSTLENRIRELAFLNPGVEITLADERDETEST----FQYDGGIREFVEYLNETRTP 238
Query: 317 LHDVVGFRKDVD-GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LH+ V + D + I +++A+Q +D ++ +AN+I T +GGTH+ G K +LTR +N
Sbjct: 239 LHEDVLYLDDEERNIQVEVAMQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVN 297
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+ + D +L GE +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ +V
Sbjct: 298 DYANGEGLLDEIDENLRGEDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESAVH 357
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L Y E HPD +++ K++ A KA AAK+A +L R+KS L S++LPGKLADC +
Sbjct: 358 EGLGTYFEEHPDTAQAVVRKAVEAAKARKAAKQAEELTRRKSALESTALPGKLADCQTRD 417
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P E+E+F+VEGDSAGGSAKQGR+R+FQ I+ PL+ I
Sbjct: 418 PNEAELFVVEGDSAGGSAKQGRNRKFQAIL-PLKGKIL 454
>gi|27466922|ref|NP_763559.1| DNA gyrase subunit B [Staphylococcus epidermidis ATCC 12228]
gi|57865927|ref|YP_190090.1| DNA gyrase, B subunit [Staphylococcus epidermidis RP62A]
gi|251811368|ref|ZP_04825841.1| DNA gyrase subunit B [Staphylococcus epidermidis BCM-HMP0060]
gi|282874725|ref|ZP_06283604.1| DNA gyrase, B subunit [Staphylococcus epidermidis SK135]
gi|293367576|ref|ZP_06614229.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
epidermidis M23864:W2(grey)]
gi|417647460|ref|ZP_12297298.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU144]
gi|417656803|ref|ZP_12306482.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU028]
gi|417659128|ref|ZP_12308738.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU045]
gi|417909208|ref|ZP_12552947.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU037]
gi|417911948|ref|ZP_12555645.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU105]
gi|417912698|ref|ZP_12556384.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU109]
gi|418325276|ref|ZP_12936483.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU071]
gi|418604519|ref|ZP_13167866.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU041]
gi|418608801|ref|ZP_13171981.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU065]
gi|418612386|ref|ZP_13175430.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU117]
gi|418617359|ref|ZP_13180257.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU120]
gi|418621984|ref|ZP_13184746.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU123]
gi|418624284|ref|ZP_13186961.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU125]
gi|418626542|ref|ZP_13189140.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU126]
gi|418664988|ref|ZP_13226448.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU081]
gi|419769996|ref|ZP_14296084.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-250]
gi|420172895|ref|ZP_14679392.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM067]
gi|420181842|ref|ZP_14688001.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM049]
gi|420186258|ref|ZP_14692330.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM040]
gi|420188871|ref|ZP_14694872.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM039]
gi|420194332|ref|ZP_14700147.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM021]
gi|420197594|ref|ZP_14703317.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM020]
gi|420207785|ref|ZP_14713271.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM008]
gi|420215373|ref|ZP_14720642.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH05005]
gi|420216527|ref|ZP_14721734.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH05001]
gi|420222776|ref|ZP_14727691.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH08001]
gi|420224635|ref|ZP_14729475.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH06004]
gi|420227733|ref|ZP_14732497.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH05003]
gi|420230696|ref|ZP_14735375.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH04003]
gi|420233032|ref|ZP_14737654.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH051668]
gi|421608632|ref|ZP_16049848.1| DNA gyrase subunit B [Staphylococcus epidermidis AU12-03]
gi|38604835|sp|Q8CQK4.1|GYRB_STAES RecName: Full=DNA gyrase subunit B
gi|81819302|sp|Q5HK03.1|GYRB_STAEQ RecName: Full=DNA gyrase subunit B
gi|27314464|gb|AAO03601.1|AE016744_4 DNA gyrase subunit B [Staphylococcus epidermidis ATCC 12228]
gi|57636585|gb|AAW53373.1| DNA gyrase, B subunit [Staphylococcus epidermidis RP62A]
gi|251805117|gb|EES57774.1| DNA gyrase subunit B [Staphylococcus epidermidis BCM-HMP0060]
gi|281296441|gb|EFA88956.1| DNA gyrase, B subunit [Staphylococcus epidermidis SK135]
gi|291318289|gb|EFE58682.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
epidermidis M23864:W2(grey)]
gi|329724157|gb|EGG60675.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU144]
gi|329735731|gb|EGG72012.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU028]
gi|329736056|gb|EGG72329.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU045]
gi|341651705|gb|EGS75502.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU105]
gi|341653799|gb|EGS77565.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU037]
gi|341657190|gb|EGS80883.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU109]
gi|365228525|gb|EHM69706.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU071]
gi|374404742|gb|EHQ75710.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU041]
gi|374409769|gb|EHQ80544.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU081]
gi|374409806|gb|EHQ80580.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU065]
gi|374818652|gb|EHR82802.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU120]
gi|374819688|gb|EHR83808.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU117]
gi|374828008|gb|EHR91858.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU125]
gi|374828054|gb|EHR91901.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU123]
gi|374831612|gb|EHR95349.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU126]
gi|383357678|gb|EID35145.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-250]
gi|394241161|gb|EJD86579.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM067]
gi|394250949|gb|EJD96080.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM049]
gi|394252623|gb|EJD97652.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM040]
gi|394253830|gb|EJD98820.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM039]
gi|394264909|gb|EJE09577.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM021]
gi|394265695|gb|EJE10346.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM020]
gi|394275018|gb|EJE19410.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM008]
gi|394282349|gb|EJE26550.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH05005]
gi|394288730|gb|EJE32634.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH08001]
gi|394291788|gb|EJE35574.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH05001]
gi|394294485|gb|EJE38164.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH06004]
gi|394296118|gb|EJE39748.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH04003]
gi|394296584|gb|EJE40209.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH05003]
gi|394300592|gb|EJE44086.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH051668]
gi|406655792|gb|EKC82215.1| DNA gyrase subunit B [Staphylococcus epidermidis AU12-03]
Length = 643
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 246/466 (52%), Positives = 318/466 (68%), Gaps = 11/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYAS+IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYASHIEVV 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V R+G YHQ Y +G P L + D+ GT IRF DK++F
Sbjct: 129 SVVNALSQDLEVYVHRNGTIYHQAYKQGVPQFDLK----EIGDTDKTGTAIRFKADKEIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +++ T+ RIRELAFLN + I L+ E + + Y + GG++ YV LN +
Sbjct: 185 TETTVYNYETLQKRIRELAFLNKGIQITLKDEREEEVRED--SYHYEGGIKSYVDLLNEN 242
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+PLHD + + D I +++ALQ+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 243 KEPLHDEPIYIHQSKDDIEVEIALQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 301
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G +SK +K+ LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 302 VLNSYGTQSKIIKEDKDRLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDR 361
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 362 LFSEHFERFLYENPSVGRIIVEKGIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCS 421
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PEESEIF+VEGDSAGGS K GRD R Q I+ PL+ I A
Sbjct: 422 SKNPEESEIFLVEGDSAGGSTKSGRDSRTQAIL-PLRGKILNVEKA 466
>gi|218961619|ref|YP_001741394.1| DNA gyrase subunit B [Candidatus Cloacamonas acidaminovorans]
gi|167730276|emb|CAO81188.1| DNA gyrase subunit B [Candidatus Cloacamonas acidaminovorans str.
Evry]
Length = 632
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/457 (49%), Positives = 316/457 (69%), Gaps = 16/457 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S TY + I+VL+GLEAVRKRPAMYIG T RGLHHLVYE++DN++DEA AGY I
Sbjct: 3 SSTYTASNIKVLKGLEAVRKRPAMYIGGTSERGLHHLVYEVIDNSIDEALAGYCDEIICT 62
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ + ++ V DNGRGIP+D+ A++ VLTVLHAGGKF S Y V+GGLHGVG+
Sbjct: 63 ITTEGNIRVEDNGRGIPVDIQKDMGVPAVQVVLTVLHAGGKFDDKS--YKVAGGLHGVGV 120
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE LEV +++DG EY ++ RG PVT L + ++ GT + F PD +F
Sbjct: 121 SVVNALSEFLEVNIFKDGKEYFMRFERGLPVTELQV----LGDTNKTGTVVTFRPDPLIF 176
Query: 254 -TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
TT FD+ + R+RELAFLN L I L+ E S + +++ + GG++ +V++LN
Sbjct: 177 ETTEFSFDY--LTSRLRELAFLNSGLRIILKDERS----GRVHDFKYEGGIKSFVEYLNQ 230
Query: 313 DKKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+KKPL + V +G+ ++ALQ+ ++ Y + + +AN+I T +GGTH+ G K+ LT
Sbjct: 231 NKKPLFPNPIYISSVKEGMEFEVALQY-NEGYQENIFSFANNINTTEGGTHLSGFKSGLT 289
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R +N+ K + +K++ +S SGE +REGLT +IS+++ NP+FEGQTKT+L N EV +V+
Sbjct: 290 RAVNTYIKNADLLKNEKVSPSGEDIREGLTAVISLKIANPQFEGQTKTKLQNSEVEGIVN 349
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+V E L EY E HP +I KS+ A ++ AA++AR+L R+K+VL S SLPGKLADC
Sbjct: 350 SAVYEKLMEYFEEHPAEAKNITMKSILAARSREAARKARELTRRKTVLESGSLPGKLADC 409
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPL 528
+ + PE++E+F+VEGDSAGGSAKQGRDR FQ I+ PL
Sbjct: 410 TLSDPEKTELFLVEGDSAGGSAKQGRDRSFQAIL-PL 445
>gi|29840266|ref|NP_829372.1| DNA gyrase subunit B [Chlamydophila caviae GPIC]
gi|29834614|gb|AAP05250.1| DNA gyrase, subunit B [Chlamydophila caviae GPIC]
Length = 806
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/475 (49%), Positives = 313/475 (65%), Gaps = 22/475 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
K+Y + I VLEGL+AVR+RP MYIG TG GLHHLVYE++DN++DEA AGY S I V +
Sbjct: 6 KSYDASAITVLEGLQAVRERPGMYIGDTGITGLHHLVYEVVDNSIDEAMAGYCSEIYVRI 65
Query: 135 LADNSVSVADNGRGIPIDLHPATNK------SALETVLTVLHAGGKFGGSSSGYSVSGGL 188
L D ++++DNGRGIPI +H +K SALE VLTVLHAGGKF S Y VSGGL
Sbjct: 66 LEDGGITISDNGRGIPIQIHEKESKKQGRDVSALEVVLTVLHAGGKFDKDS--YKVSGGL 123
Query: 189 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 248
HGVG+S VNAL+E L TV++D Y ++SRG PVT L P+ D+QGT I F+P
Sbjct: 124 HGVGVSCVNALAEKLVATVYKDKQAYQMEFSRGVPVTALQ----PLGVTDKQGTEITFYP 179
Query: 249 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQ 308
D ++F++ + FD + + R+RELAFLN +TI ++D D ++ +F+ GG++ +V
Sbjct: 180 DNKIFSSCV-FDRSILIKRLRELAFLNRGITIVF-EDDRDVSFDKVV-FFYEGGIQSFVS 236
Query: 309 WLNTDKKPLHD----VVGFRKDVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
+LN +K+ L + G R DG I + ALQW S YS+ + YAN+I T GGTH+
Sbjct: 237 YLNQNKESLFPEPIYISGIRTGDDGDIEFEAALQWNS-GYSELIYSYANNIPTRQGGTHL 295
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
G +LTR LN+ K K+ +SL+GE +REGLT ++SV+VPNP+FEGQTK +LGN
Sbjct: 296 TGFSTALTRVLNAYIKAHNLAKNDKLSLTGEDIREGLTAVVSVKVPNPQFEGQTKQKLGN 355
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
+V V Q E LT + E +P + I+ K A +A AAK+AR+L +KS L S+
Sbjct: 356 SDVGSVSQQITGEALTTFFEENPQIAKMIVEKVFIAAQAREAAKKARELTLRKSALDSAR 415
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKL DC PE+ E++IVEGDSAGGSAKQGRDRRFQ I+ P++ I A
Sbjct: 416 LPGKLIDCLEKDPEKCEMYIVEGDSAGGSAKQGRDRRFQAIL-PIRGKILNVEKA 469
>gi|418629092|ref|ZP_13191607.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU127]
gi|374834825|gb|EHR98460.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU127]
Length = 643
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 246/466 (52%), Positives = 318/466 (68%), Gaps = 11/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYAS+IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYASHIEVV 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V R+G YHQ Y +G P L + D+ GT IRF DK++F
Sbjct: 129 SVVNALSQDLEVYVHRNGTIYHQAYKQGVPQFDLK----EIGDTDKTGTAIRFKADKEIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +++ T+ RIRELAFLN + I L+ E + + Y + GG++ YV LN +
Sbjct: 185 TETTVYNYETLQKRIRELAFLNKGIQITLKDEREEEVRED--SYHYEGGIKSYVDLLNEN 242
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+PLHD + + D I +++ALQ+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 243 KEPLHDEPIYIHQSKDDIEVEIALQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 301
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G +SK +K+ LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 302 VLNSYGTQSKIIKEDKDRLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDR 361
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 362 LFSEHFERFLYENPSVGRIIVEKGIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCS 421
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PEESEIF+VEGDSAGGS K GRD R Q I+ PL+ I A
Sbjct: 422 SKNPEESEIFLVEGDSAGGSTKSGRDSRTQAIL-PLRGKILNVEKA 466
>gi|420169307|ref|ZP_14675909.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM087]
gi|394231515|gb|EJD77142.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM087]
Length = 643
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 246/466 (52%), Positives = 318/466 (68%), Gaps = 11/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYAS+IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYASHIEVV 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V R+G YHQ Y +G P L + D+ GT IRF DK++F
Sbjct: 129 SVVNALSQDLEVYVHRNGTIYHQAYKQGVPQFDLK----EIGDTDKTGTAIRFKADKEIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +++ T+ RIRELAFLN + I L+ E + + Y + GG++ YV LN +
Sbjct: 185 TETTVYNYETLQKRIRELAFLNKGIQITLKDEREEEVRED--SYHYEGGIKSYVDLLNEN 242
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+PLHD + + D I +++ALQ+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 243 KEPLHDEPIYIHQSKDDIEVEIALQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 301
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G +SK +K+ LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 302 VLNSYGTQSKIIKEDKDRLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDR 361
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 362 LFSEHFERFLYENPSVGRIIVEKGIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCS 421
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PEESEIF+VEGDSAGGS K GRD R Q I+ PL+ I A
Sbjct: 422 SKNPEESEIFLVEGDSAGGSTKSGRDSRTQAIL-PLRGKILNVEKA 466
>gi|357056605|ref|ZP_09117644.1| DNA gyrase subunit B [Clostridium clostridioforme 2_1_49FAA]
gi|355379970|gb|EHG27117.1| DNA gyrase subunit B [Clostridium clostridioforme 2_1_49FAA]
Length = 637
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/467 (50%), Positives = 321/467 (68%), Gaps = 11/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG++QIQ+LEGLEAVRKRP MYIGST RGLHHLVYEI+DNAVDEA AGY +I+V
Sbjct: 1 MGEQYGADQIQILEGLEAVRKRPGMYIGSTSARGLHHLVYEIVDNAVDEALAGYCDSIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V D+GRGIP+D+ A+E V T+LHAGGKFG + GY VSGGLHGVG
Sbjct: 61 TINEDNSITVVDDGRGIPVDIQKKAGLPAVEVVFTILHAGGKFG--NGGYKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
SVVNALSE LEV V++DG Y Q+Y RGK T ++ ++ GT++ F PDK++
Sbjct: 119 ASVVNALSEWLEVQVYKDGNIYQQRYERGK--VTYPLKIVGKCGPEQHGTKVTFLPDKEI 176
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F + +D++T+ R+RE AFL L I L+ D+ EK + + + GG++E+V +LN
Sbjct: 177 FEETV-YDYDTLKIRLRETAFLTKNLKIILK--DNREEKKE-KVFHYEGGIKEFVTYLNR 232
Query: 313 DKKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
K P++D V + + +G+ +++++Q +D+Y++ + + N+I T +GGTH+ G K +LT
Sbjct: 233 GKTPIYDQVIYCEGTREGVYVEVSMQH-NDSYTENIYTFVNNINTPEGGTHLTGFKNALT 291
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
+T N ++ K +KD + +LSGE +REGLT IISV++ +P+FEGQTK +LGN E R VD
Sbjct: 292 KTFNDYAREKKLLKDSEDNLSGEDIREGLTAIISVKIEDPQFEGQTKQKLGNSEARAAVD 351
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E LT +LE +P V SI KS+ A +A AA++ARDL R+KS L +LPGKLADC
Sbjct: 352 NIVSEQLTYFLEQNPAVAKSICEKSILAQRARAAARKARDLTRRKSALDGMALPGKLADC 411
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PE EI+IVEGDSAGGSAK R R Q I+ PL+ I A
Sbjct: 412 SDKNPENCEIYIVEGDSAGGSAKTARSRATQAIL-PLRGKILNVEKA 457
>gi|350565207|ref|ZP_08933993.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Peptoniphilus
indolicus ATCC 29427]
gi|348663986|gb|EGY80513.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Peptoniphilus
indolicus ATCC 29427]
Length = 640
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/466 (50%), Positives = 329/466 (70%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ YG+E IQVL GLE VRKRP MYIGSTG +GLHHLVYEI+DN++DEA AG S I +
Sbjct: 5 NQHYGAENIQVLTGLEPVRKRPGMYIGSTGSKGLHHLVYEIVDNSIDEALAGRCSEITIE 64
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ D SVSV+D+GRGIP D+HP T KS +ETVLT+LHAGGKF S+ Y VSGGLHGVG+
Sbjct: 65 IEKDGSVSVSDDGRGIPTDIHPQTKKSTVETVLTILHAGGKF--SNDAYKVSGGLHGVGV 122
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS L TV R+G + Q +SRG P + L ++ ++ GT+I F PD ++F
Sbjct: 123 SVVNALSTKLTATVKREGKIHQQTFSRGIPTSEL--EIIGKVAESDTGTKISFSPDPEIF 180
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T I F+ + ++ R RE+AFLN + I R D EK + Y + GG++ +V+++N
Sbjct: 181 DTLI-FEWDILSKRFREMAFLNKGVRINFR--DYREEKVREEVYHYEGGIKSFVEYINRK 237
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K P+H ++V ++ D +++A+Q+ +DAYS+ ++ +AN+I T +GG+H+ G +++LTR
Sbjct: 238 KTPIHKEIVYIDQEKDKTLVEIAIQY-TDAYSENVISFANNINTEEGGSHLSGFRSALTR 296
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
T+N G+K +K+K+ +LSG+ VREGL+ +ISV++PNP+FEGQTK +LGN E R +VD
Sbjct: 297 TINEYGRKYNIIKEKEENLSGDDVREGLSAVISVKLPNPQFEGQTKAKLGNSETRGIVDS 356
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
V + LT++LE +P V IL K+LSA +A AA+RARDL R+K++L + LPGKL+DC
Sbjct: 357 VVSDVLTDFLEENPKVGKLILDKALSARRAREAARRARDLSRKKNMLDAMPLPGKLSDCQ 416
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
+ E +EIF+VEG+SAGGSA + RD FQ I+ PL+ I A
Sbjct: 417 LSDNENTEIFLVEGNSAGGSAVEARDSVFQAIL-PLRGKIMNVEKA 461
>gi|392403099|ref|YP_006439711.1| DNA gyrase subunit B [Turneriella parva DSM 21527]
gi|390611053|gb|AFM12205.1| DNA gyrase subunit B [Turneriella parva DSM 21527]
Length = 668
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/472 (48%), Positives = 314/472 (66%), Gaps = 16/472 (3%)
Query: 64 ATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQ 123
ATE VS+ Y + +IQVLEGLEAVRKRP MYIGST GLHH+VYE++DN +DEA
Sbjct: 26 ATEEPMHGHVSEEYNASKIQVLEGLEAVRKRPGMYIGSTDLPGLHHMVYEVVDNCIDEAM 85
Query: 124 AGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYS 183
AG+ IEV + N +SV+DNGRGIP+D+HP S +E VLT LHAGGKFG Y
Sbjct: 86 AGHCDTIEVEISKGNIISVSDNGRGIPVDIHPKVGVSTVEVVLTKLHAGGKFG--DGAYK 143
Query: 184 VSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTR 243
VSGGLHGVG+SVVNALSE +EV V RDG ++H ++RGK L ++GT
Sbjct: 144 VSGGLHGVGVSVVNALSEWVEVDVHRDGKQHHIAFNRGKTRAPLKAK----GPSKKRGTT 199
Query: 244 IRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFF--AG 301
+ F D Q+F T +++ ++T++ R+RELAFLN + I +R D + + E+ F G
Sbjct: 200 VTFLADSQIFDT-LEYRYDTLSSRLRELAFLNKNVKITIR----DTREKEVKEHVFQYKG 254
Query: 302 GLEEYVQWLNTDKKPLHDVVGFR-KDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGG 360
G+ E+V+ L K PL + + DGI ++LA+++C D YS+ + +AN+I T +GG
Sbjct: 255 GIVEFVKMLTEKKNPLQKKPIYAIQQKDGIQVELAIEYC-DTYSEQIFTFANAIHTREGG 313
Query: 361 THIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTR 420
TH+EG + +LTR LN KK K + L+G+ VREGL ++S+ +PNP+FEGQTK +
Sbjct: 314 THLEGFRTALTRALNEYKKKLGYDKKVEEPLTGDDVREGLVLVLSILIPNPQFEGQTKMK 373
Query: 421 LGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLR 480
LGN EV+ +V V E L EY E +P ++ K + A A +AA++A++LVR+KS L
Sbjct: 374 LGNGEVKGIVTSVVYEKLCEYFEENPQDAKRVIEKCMQAALARIAARKAKELVRRKSALE 433
Query: 481 SSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESI 532
+ LPGKLADCS+ P++ E+FIVEGDSAGGSAKQGR+R FQ I+ PL+ I
Sbjct: 434 GAGLPGKLADCSAREPKDCELFIVEGDSAGGSAKQGRNRHFQAIL-PLKGKI 484
>gi|429726067|ref|ZP_19260877.1| DNA gyrase, B subunit [Prevotella sp. oral taxon 473 str. F0040]
gi|429148108|gb|EKX91121.1| DNA gyrase, B subunit [Prevotella sp. oral taxon 473 str. F0040]
Length = 661
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/467 (49%), Positives = 317/467 (67%), Gaps = 14/467 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRPAMYIG +GLHHLVYE +DN++DEA AGY ++IEV +
Sbjct: 11 YSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLVYETVDNSIDEALAGYCTHIEVTICK 70
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNS+ V DNGRGIP+D+H SAL+ V+TVLHAGGKF S Y VSGGLHGVG+S V
Sbjct: 71 DNSIIVQDNGRGIPVDIHEKEGVSALQVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCV 128
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS ++ V+RDG Y Q+YS GKP+ + V DR+GTR +FWPD ++FTT
Sbjct: 129 NALSTHMKSQVFRDGKIYQQEYSAGKPLYDVKV----VGQTDRRGTRQQFWPDPEIFTTT 184
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKE-DSDPEKNQYNEYFFA-GGLEEYVQWLNTDK 314
+ ++ +A R+RELAFLN LTI L E + D +E F++ GL E+V++ ++ +
Sbjct: 185 T-YRYDILANRMRELAFLNAGLTITLTDEREIDENGKPLSETFYSEQGLREFVRYQDSMR 243
Query: 315 KPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
PL DV+ + +GI +++A+ + + +YS+ + Y N+I TI+GGTH+ G ++++TR
Sbjct: 244 NPLIPDVIYINTEKEGIPVEVAIVYNT-SYSENLHSYVNNINTIEGGTHLAGFRSAVTRV 302
Query: 374 LNSLGKKS--KTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
L +++ K ++ I ++GE REGLT +ISV+V P+FEGQTKT+LGN EV V+
Sbjct: 303 LKKYAEETAQKQIEKAKIEITGEDFREGLTAVISVKVAEPQFEGQTKTKLGNSEVMGAVN 362
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
Q+V E LT YLE HP I+ K + A A +AA++AR+ V++K+ + LPGKLADC
Sbjct: 363 QAVGEALTYYLEEHPKEAKLIVDKVILAATARVAARKARETVQRKNPMSGGGLPGKLADC 422
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SS PEE E+F+VEGDSAGGSAKQGR R Q I+ PL+ I A
Sbjct: 423 SSKVPEECELFLVEGDSAGGSAKQGRSRATQAIL-PLRGKILNVEKA 468
>gi|418328445|ref|ZP_12939557.1| DNA gyrase, B subunit [Staphylococcus epidermidis 14.1.R1.SE]
gi|365231970|gb|EHM72986.1| DNA gyrase, B subunit [Staphylococcus epidermidis 14.1.R1.SE]
Length = 643
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 246/466 (52%), Positives = 318/466 (68%), Gaps = 11/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYAS+IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYASHIEVI 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V R+G YHQ Y +G P L + D+ GT IRF DK++F
Sbjct: 129 SVVNALSQDLEVYVHRNGTIYHQAYKQGVPQFDLK----EIGDTDKTGTAIRFKADKEIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +++ T+ RIRELAFLN + I L+ E + + Y + GG++ YV LN +
Sbjct: 185 TETTVYNYETLQKRIRELAFLNKGIQITLKDEREEEIRED--SYHYEGGIKSYVDLLNEN 242
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+PLHD + + D I +++ALQ+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 243 KEPLHDEPIYIHQSKDDIEVEIALQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 301
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G +SK +K+ LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 302 VLNSYGTQSKIIKEDKDRLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDR 361
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 362 LFSEHFERFLYENPSVGRIIVEKGIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCS 421
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PEESEIF+VEGDSAGGS K GRD R Q I+ PL+ I A
Sbjct: 422 SKNPEESEIFLVEGDSAGGSTKSGRDSRTQAIL-PLRGKILNVEKA 466
>gi|242243251|ref|ZP_04797696.1| DNA gyrase subunit B [Staphylococcus epidermidis W23144]
gi|416127533|ref|ZP_11596941.1| DNA gyrase, B subunit [Staphylococcus epidermidis FRI909]
gi|418631677|ref|ZP_13194129.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU128]
gi|420176465|ref|ZP_14682885.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM061]
gi|420178304|ref|ZP_14684636.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM057]
gi|420180889|ref|ZP_14687098.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM053]
gi|420192455|ref|ZP_14698314.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM023]
gi|420200868|ref|ZP_14706507.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM031]
gi|242233200|gb|EES35512.1| DNA gyrase subunit B [Staphylococcus epidermidis W23144]
gi|319399910|gb|EFV88156.1| DNA gyrase, B subunit [Staphylococcus epidermidis FRI909]
gi|374834345|gb|EHR97993.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU128]
gi|394241009|gb|EJD86430.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM061]
gi|394246494|gb|EJD91750.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM057]
gi|394248368|gb|EJD93606.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM053]
gi|394261185|gb|EJE05985.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM023]
gi|394267464|gb|EJE12054.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM031]
Length = 643
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 246/466 (52%), Positives = 318/466 (68%), Gaps = 11/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYAS+IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYASHIEVI 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V R+G YHQ Y +G P L + D+ GT IRF DK++F
Sbjct: 129 SVVNALSQDLEVYVHRNGTIYHQAYKQGVPQFDLK----EIGDTDKTGTAIRFKADKEIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +++ T+ RIRELAFLN + I L+ E + + Y + GG++ YV LN +
Sbjct: 185 TETTVYNYETLQKRIRELAFLNKGIQITLKDEREEEVRED--SYHYEGGIKSYVDLLNEN 242
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+PLHD + + D I +++ALQ+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 243 KEPLHDEPIYIHQSKDDIEVEIALQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 301
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G +SK +K+ LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 302 VLNSYGTQSKIIKEDKDRLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDR 361
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 362 LFSEHFERFLYENPSVGRIIVEKGIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCS 421
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PEESEIF+VEGDSAGGS K GRD R Q I+ PL+ I A
Sbjct: 422 SKNPEESEIFLVEGDSAGGSTKSGRDSRTQAIL-PLRGKILNVEKA 466
>gi|418412794|ref|ZP_12986045.1| DNA gyrase subunit B [Staphylococcus epidermidis BVS058A4]
gi|410883855|gb|EKS31687.1| DNA gyrase subunit B [Staphylococcus epidermidis BVS058A4]
Length = 643
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 245/466 (52%), Positives = 318/466 (68%), Gaps = 11/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYAS+IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYASHIEVV 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V R+G YHQ Y +G P L + D+ GT IRF DK++F
Sbjct: 129 SVVNALSQDLEVYVHRNGTIYHQAYKQGVPQFDLK----EIGDTDKTGTAIRFKADKEIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +++ T+ RIRELAFLN + I L+ E + + Y + GG++ Y+ LN +
Sbjct: 185 TETTVYNYETLQKRIRELAFLNKGIQITLKDEREEEVRED--SYHYEGGIKSYIDLLNEN 242
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+PLHD + + D I +++ALQ+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 243 KEPLHDEPIYIHQSKDDIEVEIALQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 301
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G +SK +K+ LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 302 VLNSYGTQSKIIKEDKDRLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDR 361
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 362 LFSEHFERFLYENPSVGRIIVEKGIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCS 421
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PEESEIF+VEGDSAGGS K GRD R Q I+ PL+ I A
Sbjct: 422 SKNPEESEIFLVEGDSAGGSTKSGRDSRTQAIL-PLRGKILNVEKA 466
>gi|385680116|ref|ZP_10054044.1| DNA gyrase subunit B [Amycolatopsis sp. ATCC 39116]
Length = 655
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/474 (49%), Positives = 324/474 (68%), Gaps = 22/474 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + I VLEGLEAVRKRP MYIGSTG RGLHHL++E++DN+VDEA AGYA+ +EV LLA
Sbjct: 8 YNASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEAMAGYATKVEVTLLA 67
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D V V D+GRGIP++ HP KS LE V TVLHAGGKF S Y+VSGGLHGVG+SVV
Sbjct: 68 DGGVRVVDDGRGIPVEEHPVHKKSTLEIVHTVLHAGGKF--DSESYAVSGGLHGVGVSVV 125
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS +L+V V RDG ++ Q Y KP + V + GT FW D +F T
Sbjct: 126 NALSRALDVEVSRDGKKWRQHYDHSKP-----GPLEEVGPAEGTGTSTTFWADPDIFETT 180
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKE---------DSDPEKNQYNE--YFFAGGLEE 305
++ T++ R++E+AFLN L+I LR E D+D ++ + E Y + GGLE+
Sbjct: 181 T-YNTETVSRRLQEMAFLNKGLSITLRDERVTEAETEADADGKQARVKERVYHYPGGLED 239
Query: 306 YVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 364
+V+ +N K P+H ++ F DG+ +++A+QW +++++ ++ +AN+I T +GGTH E
Sbjct: 240 FVKHINGSKDPIHSSIICFDAKGDGLEVEVAMQW-NNSFTPSVHTFANTINTHEGGTHEE 298
Query: 365 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 424
G +A+LTR +N+ + K +K+KD +LSG+ VREGLT IIS+++ P+FEGQTKT+LGN
Sbjct: 299 GFRAALTRVVNAYARDKKLLKEKDENLSGDDVREGLTAIISIKLAEPQFEGQTKTKLGNS 358
Query: 425 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 484
E + V E+L+++ E +P +I++K+LS+ +A +AA+RARDLVR+K L L
Sbjct: 359 EAKSFVQSKTNEWLSDWFERNPAEAKTIINKALSSAQARMAARRARDLVRRKGALEIGGL 418
Query: 485 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PGKL DC ST PEE E++IVEGDSAGGSAK+GR+ RFQ I+ P++ I A
Sbjct: 419 PGKLKDCQSTNPEECELYIVEGDSAGGSAKEGRESRFQAIL-PIRGKIINVEKA 471
>gi|226362903|ref|YP_002780683.1| DNA gyrase subunit B [Rhodococcus opacus B4]
gi|226241390|dbj|BAH51738.1| DNA gyrase subunit B [Rhodococcus opacus B4]
Length = 680
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 236/507 (46%), Positives = 326/507 (64%), Gaps = 42/507 (8%)
Query: 63 IATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEA 122
+A + ++ SK YG+ I VLEGLEAVRKRP MYIGSTG RGLHHL++E++DN+VDEA
Sbjct: 1 MAAQKSDKSTSSKDYGASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEA 60
Query: 123 QAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGY 182
AGYAS +E+ LL D V V D+GRGIP+ +H A+ +E VLT LHAGGKF S Y
Sbjct: 61 MAGYASKVEITLLEDGGVQVVDDGRGIPVGMH-ASGVPTVEVVLTQLHAGGKF--DSDSY 117
Query: 183 SVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGT 242
+VSGGLHGVG+SVVNALS L+V + RDG ++Q Y+ KP ++ ++ GT
Sbjct: 118 AVSGGLHGVGISVVNALSTRLDVDIKRDGFRWNQTYTDSKP-----GELVKGEATKETGT 172
Query: 243 RIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKED--------------SD 288
+RFW D +F T + + T+A R++E+AFLN LTI L E +D
Sbjct: 173 TVRFWADPNIFETTV-YSFETVARRLQEMAFLNKGLTITLTDERVSDAEVTEEVVSQVAD 231
Query: 289 PEKNQYNE----------------YFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGIT 331
K +E Y + GGLE+YV+ +N K+P+H+ VVGF G
Sbjct: 232 APKTAEDESAEAGAPAVHKVKTRVYHYPGGLEDYVRHINRTKQPIHNSVVGFTAKGTGHE 291
Query: 332 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 391
+++A+QW S YS+++ +AN+I T +GGTH EG +++LT T+N K +K+KD L
Sbjct: 292 LEIAMQWNS-GYSESVHTFANTINTHEGGTHEEGFRSALTATVNKYALDKKLLKEKDPKL 350
Query: 392 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 451
+G+ +REGL IISV+V P+FEGQTKT+LGN EVR V ++ E+L+ + E +P +
Sbjct: 351 TGDDIREGLAAIISVKVGEPQFEGQTKTKLGNTEVRSFVQKASNEHLSHWFEANPADAKT 410
Query: 452 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 511
I++K++S+ +A +AA++AR+LVR+KS LPGKLADC S P +SEI+IVEGDSAGG
Sbjct: 411 IVNKAVSSAQARVAARKARELVRRKSATDLGGLPGKLADCRSNDPSKSEIYIVEGDSAGG 470
Query: 512 SAKQGRDRRFQVIINPLQESIFAFASA 538
SAK GRD +Q I+ PL+ I A
Sbjct: 471 SAKSGRDSMYQAIL-PLRGKIINVEKA 496
>gi|313892202|ref|ZP_07825795.1| DNA gyrase, B subunit [Dialister microaerophilus UPII 345-E]
gi|313119340|gb|EFR42539.1| DNA gyrase, B subunit [Dialister microaerophilus UPII 345-E]
Length = 646
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/463 (50%), Positives = 319/463 (68%), Gaps = 12/463 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ I+VLEGLEAVR RP MYIGST RGLHHLVYE++DN++DEA AG+ ++IEV+L
Sbjct: 18 YSAKDIRVLEGLEAVRLRPGMYIGSTSARGLHHLVYEVVDNSIDEALAGFCTHIEVSLND 77
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D S +V DNGRGIP +H T K A+E VLTVLHAGGKFGG GY++SGGLHGVG+SVV
Sbjct: 78 DGSCTVVDNGRGIPTGMHE-TGKPAMEVVLTVLHAGGKFGGE--GYAISGGLHGVGISVV 134
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE +V V RDG + + RG ++ + GT + F PD +F
Sbjct: 135 NALSEWTKVNVRRDGKFHEMAFCRGDVTESMRTY----GETSETGTTVTFKPDPLIFKEG 190
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
FD++T+ R+RELAFLN L I L D+ ++ E+ +AGG+ E++++LN K
Sbjct: 191 TDFDYDTLKVRMRELAFLNKGLRITL--SDNRDGVSRVEEFHYAGGIVEFIKFLNEGKDA 248
Query: 317 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
+HD V+ F + D I +D+A+Q+ + YS++M + N I T +GG H+ G +++LTRT+N
Sbjct: 249 VHDDVISFEGERDKIIVDIAMQYQT-GYSESMYTFVNDINTTEGGMHLSGFRSALTRTIN 307
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+ + +K+ + +L+G+ VREGLTC+ISV+VPNP+FEGQTKT+LGN EV+ VVD V
Sbjct: 308 DYARTNNLLKENEDNLTGDDVREGLTCVISVKVPNPQFEGQTKTKLGNLEVKGVVDNIVS 367
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L YLE HP I+ K ++A +A AAKRAR+L R+K+ L SSLPGKL+DCS
Sbjct: 368 EGLHIYLEEHPAEARLIVEKGITASRAREAAKRARELTRRKNALEVSSLPGKLSDCSEKD 427
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P+++EI+IVEGDSAGGSAK GRDRR+Q I+ PL+ I A
Sbjct: 428 PKKTEIYIVEGDSAGGSAKSGRDRRYQAIL-PLRGKILNVEKA 469
>gi|418615337|ref|ZP_13178282.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU118]
gi|418634910|ref|ZP_13197301.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU129]
gi|420166072|ref|ZP_14672760.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM088]
gi|420190648|ref|ZP_14696589.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM037]
gi|420205714|ref|ZP_14711237.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM015]
gi|420209623|ref|ZP_14715059.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM003]
gi|420211483|ref|ZP_14716842.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM001]
gi|420235726|ref|ZP_14740262.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH051475]
gi|374817511|gb|EHR81691.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU118]
gi|374836452|gb|EHS00040.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU129]
gi|394234127|gb|EJD79712.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM088]
gi|394258581|gb|EJE03461.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM037]
gi|394269399|gb|EJE13933.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM015]
gi|394278520|gb|EJE22835.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM003]
gi|394280818|gb|EJE25089.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM001]
gi|394302395|gb|EJE45840.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH051475]
Length = 643
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 246/466 (52%), Positives = 318/466 (68%), Gaps = 11/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYAS+IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYASHIEVI 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V R+G YHQ Y +G P L + D+ GT IRF DK++F
Sbjct: 129 SVVNALSQDLEVYVHRNGTIYHQAYKQGVPQFDLK----EIGDTDKTGTVIRFKADKEIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +++ T+ RIRELAFLN + I L+ E + + Y + GG++ YV LN +
Sbjct: 185 TETTVYNYETLQKRIRELAFLNKGIQITLKDEREEEVRED--SYHYEGGIKSYVDLLNEN 242
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+PLHD + + D I +++ALQ+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 243 KEPLHDEPIYIHQSKDDIEVEIALQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 301
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G +SK +K+ LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 302 VLNSYGTQSKIIKEDKDRLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDR 361
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 362 LFSEHFERFLYENPSVGRIIVEKGIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCS 421
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PEESEIF+VEGDSAGGS K GRD R Q I+ PL+ I A
Sbjct: 422 SKNPEESEIFLVEGDSAGGSTKSGRDSRTQAIL-PLRGKILNVEKA 466
>gi|340751288|ref|ZP_08688109.1| DNA gyrase, B subunit [Fusobacterium mortiferum ATCC 9817]
gi|229421601|gb|EEO36648.1| DNA gyrase, B subunit [Fusobacterium mortiferum ATCC 9817]
Length = 635
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/467 (50%), Positives = 314/467 (67%), Gaps = 12/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+S Y +E I VLEGLEAVRKRP MYIG+T RGLHHLV+EI+DN+VDEA AGY ++IEV
Sbjct: 1 MSNNYQAEDITVLEGLEAVRKRPGMYIGTTSERGLHHLVWEIVDNSVDEALAGYCTHIEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
++L DN + V DNGRGIP+D+HP KSALE VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 SILPDNVIEVVDNGRGIPVDIHPKYGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS EV V ++G ++QKY+RG P V + + GT +RF D ++
Sbjct: 119 VSVVNALSLWTEVEVRKNGKVWYQKYNRGIPEEA----VKEIGITEEHGTTVRFKADHEI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F T + +D+NT+ R++ELA+LN L I L +P K + E F GG+ ++++ +
Sbjct: 175 FETLV-YDYNTLKNRLKELAYLNKGLVITLTDSRKEPFKKEIFE--FEGGIADFLREITE 231
Query: 313 D-KKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
D +K + + + +VD I +++A + + S+ + + N+I T +GGTH++G + +LT
Sbjct: 232 DTEKLIKEPIYMTGEVDNIGVEIAFLYTVNQ-SEIIYSFVNNINTHEGGTHVQGFRTALT 290
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R +N +GK +KDKD L G +REG+T I+SV+VP P+FEGQTKT+LGN EV +V
Sbjct: 291 RIINDVGKAQGLLKDKDGKLQGTDIREGVTAIVSVKVPQPQFEGQTKTKLGNSEVTGIVS 350
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V L LE +P+ I+ K L++ KA AA+RAR+LV +KS L SLPGKLADC
Sbjct: 351 TVVGGQLKMILEDNPNDTKVIIEKILNSKKAREAAQRARELVLRKSALEVGSLPGKLADC 410
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SS PEE EI+IVEGDSAGGSAKQGRDR Q I+ PL+ I A
Sbjct: 411 SSKNPEECEIYIVEGDSAGGSAKQGRDRYHQAIL-PLRGKILNVEKA 456
>gi|407796859|ref|ZP_11143810.1| DNA gyrase subunit B [Salimicrobium sp. MJ3]
gi|407018757|gb|EKE31478.1| DNA gyrase subunit B [Salimicrobium sp. MJ3]
Length = 643
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/465 (50%), Positives = 316/465 (67%), Gaps = 11/465 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AG+ +I+V +
Sbjct: 11 QAYDENQIQVLEGLEAVRKRPGMYIGSTNEKGLHHLVWEIVDNSIDEAMAGHCDHIQVVI 70
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DNS++V DNGRGIP+ + T + A+E ++TVLHAGGKFGG S LHGVG S
Sbjct: 71 EEDNSITVMDNGRGIPVGIQEKTGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGAS 128
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS+ LEV V RDG YHQ + G P V +D+ D+ GT+I F PD ++F
Sbjct: 129 VVNALSDYLEVHVHRDGKLYHQDFRHGVP----QKDVEEIDTTDKTGTQIHFKPDPEIFK 184
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEK-NQYNEYFFAGGLEEYVQWLNTD 313
++D T+ R+RELAFLN LTI + ED E N E+++ GG+ YV+ LN+
Sbjct: 185 EGQEYDFETLTTRLRELAFLNRGLTITV--EDKREEHGNGKKEFYYEGGIISYVEHLNSS 242
Query: 314 KKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
++ LH+ + + DGI+I+LALQ+ +D ++ + YAN+I T +GGTH G K LTR
Sbjct: 243 REVLHEPIYAEAEQDGISIELALQY-NDGFASNIYSYANNIHTYEGGTHESGFKTGLTRV 301
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N +K+ ++ D +L+G+ VREGLT IIS++ P+P+FEGQTKT+LGN E R V D
Sbjct: 302 INDYARKNSMFRENDPNLTGDDVREGLTVIISIKHPDPQFEGQTKTKLGNSEARTVTDAL 361
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
E +++L +P+V I+ K L A +A +AAK+AR+L R+KS L S+LPGKL+DC+S
Sbjct: 362 FSENFSKFLLENPNVAKIIVEKGLMASRARMAAKKARELTRRKSALEISNLPGKLSDCAS 421
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P ESE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 422 KDPSESELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 465
>gi|293400051|ref|ZP_06644197.1| DNA gyrase, B subunit [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|373453209|ref|ZP_09545105.1| DNA gyrase, B subunit [Eubacterium sp. 3_1_31]
gi|291306451|gb|EFE47694.1| DNA gyrase, B subunit [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|371964048|gb|EHO81586.1| DNA gyrase, B subunit [Eubacterium sp. 3_1_31]
Length = 648
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/475 (48%), Positives = 322/475 (67%), Gaps = 13/475 (2%)
Query: 66 EAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAG 125
E + V +Y ++ IQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AG
Sbjct: 10 EEMENIKVDHSYTADDIQVLEGLEAVRKRPGMYIGSTSEKGLHHLVWEIVDNSIDEALAG 69
Query: 126 YASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVS 185
+A++I++A+ DN + V DNGRG+P + + S +ET+ T+LHAGGKFGG + Y VS
Sbjct: 70 FATDIDIAIEKDNIIRVEDNGRGMPTGIVEKSGISGVETIFTILHAGGKFGGGA--YKVS 127
Query: 186 GGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG-KPVTTLTCHVLPVDSKDRQGTRI 244
GGLHGVG SVVNALSE LEVTV+++G Y ++ G K V +L + D+ G+ +
Sbjct: 128 GGLHGVGASVVNALSEWLEVTVYQNGNIYFMRFENGGKAVESLKI----IGKTDKHGSMV 183
Query: 245 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 304
RF D +FT +D T+ RIR+LAFLN + + L E + K Y + GG+
Sbjct: 184 RFKADPTIFTETQVYDFETLNTRIRQLAFLNKSIKLILTDEREEERKEIV--YKYDGGIR 241
Query: 305 EYVQWLNTDKKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
+YV++LN +K PLH+ V + + + DGI ++ALQ+ +D Y + + N+I T +GGTH
Sbjct: 242 QYVEYLNQNKSPLHEEVVYVEGIEDGILAEIALQY-NDGYVPNIYSFCNNINTAEGGTHE 300
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
+G + +LTR +N+ +++ +K KD +L+G+ VREGLT IISV+ P+P++EGQTKT+LGN
Sbjct: 301 DGFRLALTRIVNAYARENGMIK-KDETLAGDDVREGLTAIISVKHPDPQYEGQTKTKLGN 359
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
EVRK+V + E L ++ +PD I+ K + A KA +AAK+AR+L R+KS L SS
Sbjct: 360 SEVRKIVSSILGEQLEKFFLENPDTAKIIIDKCILASKARMAAKKARELTRRKSALEISS 419
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKLADCSS E EI+IVEGDSAGGSAKQGR+ +FQ I+ PL+ I A
Sbjct: 420 LPGKLADCSSRDASECEIYIVEGDSAGGSAKQGRNSKFQAIL-PLRGKILNVEKA 473
>gi|160883910|ref|ZP_02064913.1| hypothetical protein BACOVA_01884 [Bacteroides ovatus ATCC 8483]
gi|336417360|ref|ZP_08597684.1| DNA gyrase, B subunit [Bacteroides ovatus 3_8_47FAA]
gi|423290605|ref|ZP_17269454.1| DNA gyrase, B subunit [Bacteroides ovatus CL02T12C04]
gi|423294128|ref|ZP_17272255.1| DNA gyrase, B subunit [Bacteroides ovatus CL03T12C18]
gi|156110640|gb|EDO12385.1| DNA gyrase, B subunit [Bacteroides ovatus ATCC 8483]
gi|335936106|gb|EGM98046.1| DNA gyrase, B subunit [Bacteroides ovatus 3_8_47FAA]
gi|392665258|gb|EIY58786.1| DNA gyrase, B subunit [Bacteroides ovatus CL02T12C04]
gi|392676624|gb|EIY70055.1| DNA gyrase, B subunit [Bacteroides ovatus CL03T12C18]
Length = 652
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/470 (48%), Positives = 312/470 (66%), Gaps = 12/470 (2%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
P + +Y ++ IQVLEGLEAVRKRPAMYIG +GLHHLVYEI+DN++DEA AGY +IE
Sbjct: 8 PNNGSYSADSIQVLEGLEAVRKRPAMYIGDISVKGLHHLVYEIVDNSIDEALAGYCDHIE 67
Query: 132 VALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 191
V + DNS++V DNGRGIP+D H KSALE +TVLHAGGKF S Y VSGGLHGV
Sbjct: 68 VTINEDNSITVQDNGRGIPVDYHEKEKKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGV 125
Query: 192 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 251
G+S VNALS + V+RDG Y Q+Y GKP+ + V V + D GTR +FWPD
Sbjct: 126 GMSCVNALSTHMTTQVFRDGKIYQQEYEIGKPLYS----VKEVGTADITGTRQQFWPDNT 181
Query: 252 VFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYN--EYFFAGGLEEYVQW 309
+FT + +D+ +A R+RELA+LN L I L E + +++ GL E+V++
Sbjct: 182 IFTETV-YDYKILASRLRELAYLNAGLRITLTDRRVVNEDGSFKGEQFYSEEGLREFVRF 240
Query: 310 LNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+ + ++ L +DV+ + GI I++A+ + + +S+ + Y N+I TI+GGTH+ G +
Sbjct: 241 IESSREHLINDVIYLNSEKQGIPIEVAIMYNT-GFSENVHSYVNNINTIEGGTHLAGFRR 299
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
+LTRTL + SK ++ + +SG+ REGLT +ISV+V P+FEGQTKT+LGN EV
Sbjct: 300 ALTRTLKKYAEDSKMLEKVKVEISGDDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVMG 359
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
VDQ+V E L YLE HP +I+ K + A A AA++AR++V++KS + LPGKL
Sbjct: 360 AVDQAVGEVLAYYLEEHPKEAKTIVDKVILAATARHAARKAREMVQRKSPMSGGGLPGKL 419
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
ADCS P + E+F+VEGDSAGG+AKQGR+R FQ I+ PL+ I A
Sbjct: 420 ADCSDKDPSKCELFLVEGDSAGGTAKQGRNRMFQAIL-PLRGKILNVEKA 468
>gi|419770807|ref|ZP_14296873.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-K]
gi|383362634|gb|EID39981.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-K]
Length = 643
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 246/466 (52%), Positives = 318/466 (68%), Gaps = 11/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYAS+IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYASHIEVV 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 71 IEKDNWIIVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V R+G YHQ Y +G P L + D+ GT IRF DK++F
Sbjct: 129 SVVNALSQDLEVYVHRNGTIYHQAYKQGVPQFDLK----EIGDTDKTGTAIRFKADKEIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +++ T+ RIRELAFLN + I L+ E + + Y + GG++ YV LN +
Sbjct: 185 TETTVYNYETLQKRIRELAFLNKGIQITLKDEREEEVRED--SYHYEGGIKSYVDLLNEN 242
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+PLHD + + D I +++ALQ+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 243 KEPLHDEPIYIHQSKDDIEVEIALQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 301
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G +SK +K+ LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 302 VLNSYGTQSKIIKEDKDRLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDR 361
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 362 LFSEHFERFLYENPSVGRIIVEKGIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCS 421
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PEESEIF+VEGDSAGGS K GRD R Q I+ PL+ I A
Sbjct: 422 SKNPEESEIFLVEGDSAGGSTKSGRDSRTQAIL-PLRGKILNVEKA 466
>gi|189502463|ref|YP_001958180.1| hypothetical protein Aasi_1109 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497904|gb|ACE06451.1| hypothetical protein Aasi_1109 [Candidatus Amoebophilus asiaticus
5a2]
Length = 651
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/473 (49%), Positives = 320/473 (67%), Gaps = 20/473 (4%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ TY ++ IQVLEGLEAVRKRPAMYIG GP+GLHHLV+E++DN++DEA AGY + I+V
Sbjct: 7 LQNTYSADSIQVLEGLEAVRKRPAMYIGDIGPKGLHHLVWEVVDNSIDEALAGYCTTIKV 66
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ +DNS++V+DNGRGIP D+H +SALE V+TVLHAGGKF + Y VSGGLHGVG
Sbjct: 67 QIHSDNSITVSDNGRGIPTDIHAKEKRSALEVVMTVLHAGGKFDKGT--YKVSGGLHGVG 124
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+S VNALS L+ TV+RDG Y Q+Y++G P+ V V + +GT I F PD +
Sbjct: 125 VSCVNALSTHLQATVYRDGKIYQQEYAKGAPLYP----VKEVGTTTLRGTTIHFQPDDSI 180
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRK-EDSDPEKNQYNEYFFA-GGLEEYVQWL 310
FTT ++++TIA R+ ELA+LN LTI L + D E N E F + GGL E+V +L
Sbjct: 181 FTTTT-YNYSTIAARLGELAYLNAGLTIELTDLREQDQEGNFLQETFHSEGGLAEFVAYL 239
Query: 311 NTDK-----KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 365
+ + +P++ + G + DV + +AL + + +++ ++ Y N+I TI+GGTH+ G
Sbjct: 240 DDAREKLIPQPIY-MEGEKYDV---PVQVALSYNT-GFTENVVSYVNNINTIEGGTHVAG 294
Query: 366 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 425
+ +LTRTL S +KS ++ + + G+ REGLT +ISV+V P+FEGQTKT+LGN E
Sbjct: 295 FRRALTRTLKSYAEKSNLLEKAKVEIVGDDFREGLTAVISVKVSEPQFEGQTKTKLGNAE 354
Query: 426 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 485
V VD V E L YLE HP I+SK + A +A AA++AR++V++K+VL LP
Sbjct: 355 VVGAVDSCVSETLQNYLEEHPQEAKIIVSKVILAAQARHAARKAREMVQRKNVLTGGGLP 414
Query: 486 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
GKLADCS P E+++VEGDSAGG+AKQGRDRRFQ I+ PL+ I A
Sbjct: 415 GKLADCSDNDPAACELYLVEGDSAGGTAKQGRDRRFQAIL-PLRGKILNVEKA 466
>gi|31071471|dbj|BAC76784.1| DNA gyrase B subunit [Anabaena planctonica]
Length = 396
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/401 (57%), Positives = 300/401 (74%), Gaps = 9/401 (2%)
Query: 102 TGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSA 161
TGPRGLHHLVYE++DN+VDEA AGY +++EV + AD SV+V D+GRGIP D+HP T KSA
Sbjct: 1 TGPRGLHHLVYEVVDNSVDEALAGYCTHVEVDINADGSVTVTDDGRGIPTDIHPKTGKSA 60
Query: 162 LETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG 221
LETVLTVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD + Q+Y R
Sbjct: 61 LETVLTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEFVEVTVWRDHKIHTQRYERS 118
Query: 222 KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIA 281
PVT L +DR GT I F PD Q+FTT+I+FD+ T++GR+RELA+LN + I
Sbjct: 119 FPVTELVAKPY---KEDRTGTSITFKPDTQIFTTSIEFDYITLSGRLRELAYLNAGVKIT 175
Query: 282 L---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQ 337
R E + + Y + GG +EY+ ++N DK+PLH+ ++ + + + + ++++LQ
Sbjct: 176 FTDHRLELLKSDIPKIETYEYKGGFKEYIAYMNRDKQPLHEEIIYVQGERNNVQVEVSLQ 235
Query: 338 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 397
WC+DAY+D +LG+AN+IRTIDGGTH+EG+KA LTRTLN+ +K +K+ + +LSGEHVR
Sbjct: 236 WCTDAYTDNVLGFANNIRTIDGGTHLEGLKAVLTRTLNATARKRNKIKENESNLSGEHVR 295
Query: 398 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 457
EGLT +ISV+VP+PEFEGQTKTRLGN EVR +VD V E LTEYL+ HP + D+IL K++
Sbjct: 296 EGLTAVISVKVPDPEFEGQTKTRLGNTEVRGIVDSFVGEVLTEYLDFHPAIADAILDKAI 355
Query: 458 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEE 498
A KAA AA+ AR+LVR+KSVL SS LPGKLADCSS P E
Sbjct: 356 QAFKAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPAE 396
>gi|404494857|ref|YP_006718963.1| DNA gyrase subunit B [Geobacter metallireducens GS-15]
gi|418067094|ref|ZP_12704446.1| DNA gyrase, B subunit [Geobacter metallireducens RCH3]
gi|78192487|gb|ABB30254.1| DNA gyrase, B subunit [Geobacter metallireducens GS-15]
gi|373559455|gb|EHP85752.1| DNA gyrase, B subunit [Geobacter metallireducens RCH3]
Length = 795
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/469 (48%), Positives = 326/469 (69%), Gaps = 13/469 (2%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
+ ++ YG+++I+VLEGLEAVRKRPAMYIGST +GLHHLVYEI+DN++DEA AGY + +
Sbjct: 3 DELNNDYGADKIKVLEGLEAVRKRPAMYIGSTASQGLHHLVYEIVDNSIDEALAGYCNEV 62
Query: 131 EVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 190
V + D S++V DNGRGIP ++HP K A E LTVLHAGGKF +S Y VSGGLHG
Sbjct: 63 NVTIHLDGSITVVDNGRGIPTEMHPTEGKPAAEVALTVLHAGGKFDNTS--YKVSGGLHG 120
Query: 191 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 250
VG+SVVNALS+ LE+ + RDG + Q Y+ G P+T L V ++GTRI F PD
Sbjct: 121 VGVSVVNALSKKLELGIRRDGKVFQQSYAYGAPLTPLEI----VGETKKRGTRITFLPDD 176
Query: 251 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWL 310
+F T +F + ++ R+RELAFLN + I + E E+ +++++ + GG+ +V++L
Sbjct: 177 TIFETT-EFSFDILSQRLRELAFLNAGVRITISDE---REEGKHHDFHYEGGIVSFVEYL 232
Query: 311 NTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
N ++ LH V FR + GI +++A+Q+ +D+Y + + +AN+I T +GGTH+ G +A+
Sbjct: 233 NRNRTVLHPKPVYFRGERAGIDMEIAIQY-NDSYDEKVFTFANNINTHEGGTHLVGFRAA 291
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
LTR++NS ++ K + +S+SGE +REGLT +ISV++P P+FEGQTKT+LGN EV+
Sbjct: 292 LTRSMNSYAAANELTKKEKVSISGEDLREGLTAVISVKIPQPQFEGQTKTKLGNSEVKGF 351
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
V+ + E L +LE +P + I+ KS+ A +A AA++AR+L R+KS L SSLPGKLA
Sbjct: 352 VESLMNEQLAVFLEENPKIAKDIIGKSIEAARAREAARKARELTRRKSALDISSLPGKLA 411
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
DC P E+++VEGDSAGGSAKQGRDR+FQ I+ PL+ I A
Sbjct: 412 DCQERDPALCELYLVEGDSAGGSAKQGRDRKFQAIL-PLKGKILNVEKA 459
>gi|289422479|ref|ZP_06424322.1| DNA gyrase, B subunit [Peptostreptococcus anaerobius 653-L]
gi|429727415|ref|ZP_19262187.1| DNA gyrase, B subunit [Peptostreptococcus anaerobius VPI 4330]
gi|289157051|gb|EFD05673.1| DNA gyrase, B subunit [Peptostreptococcus anaerobius 653-L]
gi|429152573|gb|EKX95391.1| DNA gyrase, B subunit [Peptostreptococcus anaerobius VPI 4330]
Length = 635
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 239/460 (51%), Positives = 319/460 (69%), Gaps = 11/460 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ YG++QIQVLEGLEAVRKRP MYIGSTGPRGLHHLVYE++DN++DEA AG S I ++L
Sbjct: 4 QEYGADQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGNCSEIYISL 63
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
D SV+V DNGRGIP+++HP T S LETVLTVLHAGGKFGG S LHGVG+S
Sbjct: 64 NDDGSVTVRDNGRGIPVEVHPKTGLSTLETVLTVLHAGGKFGGGGYKVSGG--LHGVGVS 121
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS+ + V RDG Y Q+Y +G VT V+ + K+ GT I F PD +F
Sbjct: 122 VVNALSDWVVAEVSRDGKLYRQRYEKG--VTKTKLEVVDENQKE-SGTSITFMPDASIFD 178
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
+ F + T+ R REL+FLN + I + EK++ + + GGL EYV++LN K
Sbjct: 179 EVV-FSYETLEYRFRELSFLNRVIKIVFDDKRKGQEKSK--TFHYTGGLIEYVKYLNRTK 235
Query: 315 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
LHD ++ K D TI+LALQ+ +DAYS+ + +AN+I T +GG H+ G K +LT+
Sbjct: 236 NTLHDQIIYVDKMQDDCTIELALQY-TDAYSENIYSFANNINTHEGGVHLSGFKTALTKA 294
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N +++ +KDKD +L+GE +REG+T I+SV++P P+FEGQTKT+LGN +R +VD
Sbjct: 295 MNDYARRNNILKDKDSNLTGEDIREGITAIVSVKLPEPQFEGQTKTKLGNTFMRGIVDSI 354
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
E + ++E +P V I+ K L + +A AAK+AR+L R+KSVL ++SLPGKLADCS
Sbjct: 355 ANEEIGAFMEENPSVARVIIDKCLRSQRAREAAKKARELTRRKSVLETTSLPGKLADCSE 414
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
+PE+SEIF+VEGDSAGGSAK GRDR Q I+ PL+ I
Sbjct: 415 KSPEKSEIFLVEGDSAGGSAKGGRDRNIQAIL-PLRGKIL 453
>gi|348175287|ref|ZP_08882181.1| DNA gyrase subunit B [Saccharopolyspora spinosa NRRL 18395]
Length = 657
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 236/476 (49%), Positives = 320/476 (67%), Gaps = 24/476 (5%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
P Y + I VLEGLEAVRKRP MYIGSTG RGLHHLV E++DN+VDEA AGYAS +E
Sbjct: 3 PKKSEYNASSITVLEGLEAVRKRPGMYIGSTGERGLHHLVQEVVDNSVDEAMAGYASRVE 62
Query: 132 VALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 191
V LLAD V V D+GRGIP+ +HP K LE VLTVLHAGGKF S Y+VSGGLHGV
Sbjct: 63 VTLLADGGVRVVDDGRGIPVGIHPVEKKPTLEVVLTVLHAGGKF--DSDSYAVSGGLHGV 120
Query: 192 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 251
G+SVVNALS +LE + DG + Q+Y KPV V + D+ GT I FW D
Sbjct: 121 GVSVVNALSTALEAEIHLDGYVWRQRYEDSKPV----ADVERGERTDKTGTTITFWADPT 176
Query: 252 VFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE-------------YF 298
+F T +++ TI+ R++E+AFLN LTI LR E + E+++ E +
Sbjct: 177 IFETT-RYNAETISRRLQEMAFLNKGLTIVLRDERA-AEEDEAGEDASGTTARATERTFH 234
Query: 299 FAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTI 357
+ GGLE++V+ +N K+P+H VV F +++A+QW S Y+ ++ +AN+I T
Sbjct: 235 YPGGLEDFVRHINATKEPIHKKVVSFNASSKDYELEIAMQWNS-GYNQSVYTFANTINTH 293
Query: 358 DGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQT 417
+GGTH EG +++LTR +NS K K +K+KD SL+G+ VREGL I+SV+V P+FEGQT
Sbjct: 294 EGGTHEEGFRSALTRVVNSYAKDKKLLKEKDGSLTGDDVREGLAAIVSVKVREPQFEGQT 353
Query: 418 KTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKS 477
KT+LGN EV+ V + E+LT++ E +P I++K++S+ +A +AA++A++LVR+KS
Sbjct: 354 KTKLGNTEVKSFVQTTAFEWLTDWFERNPAEAKVIVNKAVSSAQARMAARKAKELVRRKS 413
Query: 478 VLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
+ LPGKL DC S PEE E+++VEGDSAGGSAK+GR+ RFQ I+ PL+ I
Sbjct: 414 AMDIGGLPGKLKDCQSNNPEECELYVVEGDSAGGSAKEGRESRFQAIL-PLRGKII 468
>gi|15618195|ref|NP_224480.1| DNA gyrase subunit B [Chlamydophila pneumoniae CWL029]
gi|15835810|ref|NP_300334.1| DNA gyrase subunit B [Chlamydophila pneumoniae J138]
gi|16752763|ref|NP_445031.1| DNA gyrase subunit B [Chlamydophila pneumoniae AR39]
gi|33241617|ref|NP_876558.1| DNA gyrase subunit B [Chlamydophila pneumoniae TW-183]
gi|6647530|sp|Q9Z8R3.1|GYRB_CHLPN RecName: Full=DNA gyrase subunit B
gi|4376548|gb|AAD18424.1| DNA Gyrase Subunit B [Chlamydophila pneumoniae CWL029]
gi|7189402|gb|AAF38314.1| DNA gyrase, subunit B [Chlamydophila pneumoniae AR39]
gi|8978649|dbj|BAA98485.1| DNA gyrase subunit B [Chlamydophila pneumoniae J138]
gi|28415637|dbj|BAC57414.1| DNA Gyrase Subunit B [Chlamydia pneumoniae]
gi|33236126|gb|AAP98215.1| DNA gyrase subunit B [Chlamydophila pneumoniae TW-183]
Length = 805
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 238/479 (49%), Positives = 312/479 (65%), Gaps = 22/479 (4%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
+P K Y + I VLEGL+AVR+RP MYIG TG GLHHLVYE++DN++DEA AGY S I
Sbjct: 2 DPKEKNYDASAITVLEGLQAVRERPGMYIGDTGITGLHHLVYEVVDNSIDEAMAGYCSRI 61
Query: 131 EVALLADNSVSVADNGRGIPIDLHPATNK------SALETVLTVLHAGGKFGGSSSGYSV 184
+V +L D + + DNGRGIPI++H + SALE VLTVLHAGGKF S Y V
Sbjct: 62 DVRILEDGGIVIVDNGRGIPIEVHERESAKQGREVSALEVVLTVLHAGGKFDKDS--YKV 119
Query: 185 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 244
SGGLHGVG+S VNALSE L TV++D Y ++SRG PVT L V DRQGT I
Sbjct: 120 SGGLHGVGVSCVNALSEKLVATVFKDKKCYQMEFSRGIPVTPLQY----VSVSDRQGTEI 175
Query: 245 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 304
F+PD ++F+T FD + + R+RELAFLN +TI ++D D ++ +F+ GG++
Sbjct: 176 VFYPDPKIFSTC-TFDRSILMKRLRELAFLNRGITIVF-EDDRDVSFDKVT-FFYEGGIQ 232
Query: 305 EYVQWLNTDKKPLHD----VVGFRKDVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDG 359
+V +LN +K+ L + G R DG I + ALQW S YS+ + YAN+I T G
Sbjct: 233 SFVSYLNQNKESLFSEPIYICGTRVGDDGEIEFEAALQWNS-GYSELVYSYANNIPTRQG 291
Query: 360 GTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKT 419
GTH+ G +LTR +N+ K K+ ++L+GE +REGLT +ISV+VPNP+FEGQTK
Sbjct: 292 GTHLTGFSTALTRVINTYIKAHNLAKNNKLALTGEDIREGLTAVISVKVPNPQFEGQTKQ 351
Query: 420 RLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVL 479
+LGN +V V Q V E LT + E +P + I+ K A +A AAK+AR+L +KS L
Sbjct: 352 KLGNSDVSSVAQQVVGEALTIFFEENPQIARMIVDKVFVAAQAREAAKKARELTLRKSAL 411
Query: 480 RSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S+ LPGKL DC PE+ E++IVEGDSAGGSAKQGRDRRFQ I+ P++ I A
Sbjct: 412 DSARLPGKLIDCLEKDPEKCEMYIVEGDSAGGSAKQGRDRRFQAIL-PIRGKILNVEKA 469
>gi|126179353|ref|YP_001047318.1| DNA gyrase, B subunit [Methanoculleus marisnigri JR1]
gi|125862147|gb|ABN57336.1| DNA gyrase subunit B [Methanoculleus marisnigri JR1]
Length = 656
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 242/488 (49%), Positives = 325/488 (66%), Gaps = 31/488 (6%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ TY + I VLEGL VR+RPAMYIGST RGLHHLVYE++DNAVDEA AG+ I+V
Sbjct: 1 MTDTYDASHITVLEGLRPVRERPAMYIGSTESRGLHHLVYEVVDNAVDEALAGFCDLIQV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ D SVSV DNGRGIP+DL P KSALE VLTVLHAGGKF ++ Y VSGGLHGVG
Sbjct: 61 TVNRDGSVSVDDNGRGIPVDLMPQYGKSALEIVLTVLHAGGKFDKNT--YQVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRG---KPVTTL--TCHVL--------------P 233
+SVVNALS L+ TV++DG Y ++ +G KP+ + T H + P
Sbjct: 119 VSVVNALSSWLDATVFKDGNVYAMQFRQGLVAKPLASRPETEHEMEARYEERYGARDGQP 178
Query: 234 VDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQ 293
+D + +GTRI F PD+ +F T ++FD++ + R+RELA+LN LTI LR D
Sbjct: 179 LDYERLRGTRITFQPDRSIFET-VEFDYDVLDHRLRELAYLNSGLTIVLR----DERTGD 233
Query: 294 YNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDG---ITIDLALQWCSDAYSDTMLGY 350
Y F G+ ++V L K+ LHD + + + D + +++ALQ+ +++YS+T+ Y
Sbjct: 234 VVTYCFEDGIRQFVAHLGEGKESLHDDIIYFQKRDSESKVEVEVALQY-NNSYSETIYTY 292
Query: 351 ANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPN 410
NS+ T +GGTH+EG +++LTR +NS ++ +K+ D + GE VREGL C+IS RV N
Sbjct: 293 VNSVNTREGGTHLEGFRSALTRAINSAAHRNNLLKNNDAQVKGEDVREGLACVISTRVAN 352
Query: 411 PEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRAR 470
P+FEGQTK RLGN VR +VD V LTEY E HP L +++ K+++A +A AA+ AR
Sbjct: 353 PQFEGQTKMRLGNSNVRGIVDSLVYSSLTEYFEEHPKTLQTVVDKAMAAARAREAARTAR 412
Query: 471 DLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQE 530
+L R+KS L S+ LPGKLADC P +SE++IVEGDSAGGSAKQGRDR+FQ I+ PL+
Sbjct: 413 ELARRKSTLESTGLPGKLADCQERDPAKSELYIVEGDSAGGSAKQGRDRKFQAIL-PLRG 471
Query: 531 SIFAFASA 538
I A
Sbjct: 472 KILNVEKA 479
>gi|126697571|ref|YP_001086468.1| DNA gyrase subunit B [Clostridium difficile 630]
gi|254977347|ref|ZP_05273819.1| DNA gyrase subunit B [Clostridium difficile QCD-66c26]
gi|255094677|ref|ZP_05324155.1| DNA gyrase subunit B [Clostridium difficile CIP 107932]
gi|255102904|ref|ZP_05331881.1| DNA gyrase subunit B [Clostridium difficile QCD-63q42]
gi|255308724|ref|ZP_05352895.1| DNA gyrase subunit B [Clostridium difficile ATCC 43255]
gi|255316431|ref|ZP_05358014.1| DNA gyrase subunit B [Clostridium difficile QCD-76w55]
gi|255519091|ref|ZP_05386767.1| DNA gyrase subunit B [Clostridium difficile QCD-97b34]
gi|255652274|ref|ZP_05399176.1| DNA gyrase subunit B [Clostridium difficile QCD-37x79]
gi|260681774|ref|YP_003213059.1| DNA gyrase subunit B [Clostridium difficile CD196]
gi|306521988|ref|ZP_07408335.1| DNA gyrase, B subunit [Clostridium difficile QCD-32g58]
gi|384359324|ref|YP_006197176.1| DNA gyrase subunit B [Clostridium difficile BI1]
gi|423088743|ref|ZP_17077117.1| DNA gyrase, B subunit [Clostridium difficile 70-100-2010]
gi|115249008|emb|CAJ66819.1| DNA gyrase subunit B [Clostridium difficile 630]
gi|260207937|emb|CBA60049.1| DNA gyrase subunit B [Clostridium difficile CD196]
gi|357559149|gb|EHJ40609.1| DNA gyrase, B subunit [Clostridium difficile 70-100-2010]
Length = 633
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 237/462 (51%), Positives = 323/462 (69%), Gaps = 12/462 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ QIQVLEGLEAVRKRP MYIGST PRGLHHLVYE++DN++DEA GY S+I V
Sbjct: 1 MKQEYGASQIQVLEGLEAVRKRPGMYIGSTSPRGLHHLVYEVVDNSIDEALQGYCSDIYV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
++ D SV V DNGRGIP+++HP T KS LETVLT LHAGGKFGG VSGGLHGVG
Sbjct: 61 SINEDGSVLVKDNGRGIPVEIHPKTGKSTLETVLTNLHAGGKFGGGGY--KVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ + V+ +G Y Q Y +G P + L V +GT I+F PD+ +
Sbjct: 119 VSVVNALSKWMVAEVYLNGKIYKQTYEKGLPTSKLEV----VGESQDKGTMIQFMPDETI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F I+F + T+ R+REL+FLN + I ED + + E+ + GGL EY+++LN
Sbjct: 175 FD-EIEFKYETLEYRLRELSFLNKGIKIVF--EDKREGQEKRKEFHYTGGLVEYIKYLNK 231
Query: 313 DKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+ +HD +V K VD ++LA+Q+ +D Y++ + +AN+I T +GG+H+ G KA+LT
Sbjct: 232 SRTGIHDDIVYIDKKVDDCFVELAMQY-TDGYTENIYSFANNINTHEGGSHLSGFKAALT 290
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
+T+N K++K +K+ D++L GE +REGLT ++SV++P P+FEGQTKT+LGN +R +VD
Sbjct: 291 KTVNDYAKRNKFLKENDVNLLGEDIREGLTAVVSVKLPEPQFEGQTKTKLGNSFMRGIVD 350
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+ L +LE +P I+ K+L A +A AAK+AR+L R+KSVL S+SLPGKLADC
Sbjct: 351 SVTVDELGSFLEENPSTARIIVDKALRAQRAREAAKKARELTRRKSVLESTSLPGKLADC 410
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
+ P +SEIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 411 AEKDPSKSEIFLVEGDSAGGSAKQGRDRNSQAIL-PLRGKIL 451
>gi|23978230|dbj|BAC21111.1| DNA gyrase B subunit [Anabaena variabilis]
Length = 396
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/401 (57%), Positives = 301/401 (75%), Gaps = 9/401 (2%)
Query: 102 TGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSA 161
TGPRGLHHLVYE++DN++DEA AGY ++IEV + AD SV+V D+GRGIPID H T KSA
Sbjct: 1 TGPRGLHHLVYEVVDNSIDEALAGYCTHIEVEINADGSVAVTDDGRGIPIDTHSRTGKSA 60
Query: 162 LETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG 221
LETV+TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD + Q+Y RG
Sbjct: 61 LETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEVVEVTVWRDKKVHTQRYERG 118
Query: 222 KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIA 281
PVT L + + R GT + F PD Q+FT +I+FD+ TI+GR+RELA+LN + I
Sbjct: 119 VPVTELITNPY---KEARTGTSVTFKPDTQIFTNSIEFDYITISGRLRELAYLNAGVKIT 175
Query: 282 L---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQ 337
R E + + Y + GG++EY+ ++N DK+PLH+ ++ + + + + I+++LQ
Sbjct: 176 FTDNRLELLKSDTPKVESYEYKGGIKEYIAYMNRDKQPLHEEIIYVQGERNNVQIEVSLQ 235
Query: 338 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 397
WC+DAY+D +LG+AN+IRTIDGGTH+EG+KA LTRTLN++ +K +K+ + +LSGEHVR
Sbjct: 236 WCTDAYTDNVLGFANNIRTIDGGTHLEGLKAVLTRTLNTIARKRNKIKEHEPNLSGEHVR 295
Query: 398 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 457
EGLT +ISV+VP+PEFEGQT+T+LGN EVR +VD V E LTEYLE HP + DSIL K++
Sbjct: 296 EGLTAVISVKVPDPEFEGQTQTKLGNTEVRGIVDSLVGEVLTEYLEFHPGIADSILDKAI 355
Query: 458 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEE 498
A KAA AA+ AR+LVR+KSVL SS LPGKLADCSS P E
Sbjct: 356 QAFKAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPSE 396
>gi|270307455|ref|YP_003329513.1| DNA gyrase subunit B [Dehalococcoides sp. VS]
gi|270153347|gb|ACZ61185.1| DNA gyrase, B subunit [Dehalococcoides sp. VS]
Length = 642
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 239/466 (51%), Positives = 311/466 (66%), Gaps = 14/466 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S+ Y + IQVLEGL AVRKRP MYIGST RGLHHLVYEI+ N+VDEA AG I+V
Sbjct: 13 SENYTASDIQVLEGLAAVRKRPGMYIGSTDQRGLHHLVYEIVYNSVDEAMAGVCDRIKVI 72
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ D SVSV DNGRGIP+D+HP T SALETV+TVLHAG KFGG + Y VSGGLHGVG
Sbjct: 73 MFKDGSVSVEDNGRGIPVDIHPVTKISALETVMTVLHAGAKFGGKT--YQVSGGLHGVGA 130
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNAL+E V V R+G Y Q Y RGKP T L + D GT F D Q+F
Sbjct: 131 SVVNALAEWTTVKVRRNGKIYQQSYQRGKPSTPLE----EIGVSDGSGTTTIFKADSQIF 186
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
+T ++D + R+RE+A+LN L + + E SD E+ Y+F GG+ +V+ LN +
Sbjct: 187 STT-EYDFEILTDRLREIAYLNKGLEVYIYDEQSDQERT----YYFEGGITGFVRHLNRN 241
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
++ H + K D +++A+Q+ +D YSD+ L +AN + TIDGGTH+ G +++LTR
Sbjct: 242 REVRHRQPIYITKKSDSTILEVAIQY-NDGYSDSTLTFANCVNTIDGGTHLTGFRSALTR 300
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
N KSK +KD D +L G+ VREG+ I+SV++P P+FEGQTK +LGN E++ V+
Sbjct: 301 AFNDYAHKSKFLKDTDPNLMGDDVREGIVAIVSVKLPEPQFEGQTKGKLGNIEIKSFVES 360
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+V E L+ YLE HPD IL K ++A KA AA++ARDL+ +KS L + +LPGKLADCS
Sbjct: 361 AVAEQLSLYLEEHPDDTKRILEKCITAAKAREAARKARDLIIRKSALDTGTLPGKLADCS 420
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
E+F+VEGDSAGGSAKQGR+RRFQ I+ PL+ I A
Sbjct: 421 ERDASLCELFLVEGDSAGGSAKQGRNRRFQAIL-PLRGKILNVEKA 465
>gi|257871393|ref|ZP_05651046.1| DNA gyrase B subunit [Enterococcus gallinarum EG2]
gi|257805557|gb|EEV34379.1| DNA gyrase B subunit [Enterococcus gallinarum EG2]
Length = 649
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/466 (50%), Positives = 319/466 (68%), Gaps = 11/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DEA AG+A+ I+V
Sbjct: 12 AKEYDASQIQVLEGLEAVRKRPGMYIGSTSSEGLHHLVWEIVDNSIDEALAGFATAIQVI 71
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++V D+GRGIP+D+ T + A+ETV T+LHAGGKFGG S LHGVG
Sbjct: 72 IEEDNSITVVDDGRGIPVDIQAKTGRPAVETVFTILHAGGKFGGGGYKVSGG--LHGVGS 129
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS +L+V V+++G Y+Q+Y RG V L + DR GT + F PD ++F
Sbjct: 130 SVVNALSTTLDVKVFKEGKVYYQEYHRGAVVEDLKV----IGETDRHGTTVHFVPDPEIF 185
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T F+ + +A R+RELAFLN L I++ ED E EY + GG++ YV+ LN
Sbjct: 186 TETTVFNFDKLATRVRELAFLNRGLKISI--EDKREEHPVLKEYHYDGGIKSYVEHLNAS 243
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K + + + + GIT++++LQ+ +D+Y + +L +AN+I T +GGTH G K +LTR
Sbjct: 244 KTVIFPEPIYLEGEQQGITVEVSLQY-TDSYHNNLLSFANNIHTYEGGTHESGFKTALTR 302
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N +KSK +K+ D +L+GE VREGLT +IS++ P+P+FEGQTKT+LGN EVR V D+
Sbjct: 303 VINDYARKSKLMKENDENLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEVRTVTDR 362
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ T++L +P V ++ K L A KA AAKRAR++ R+K L S+LPGKLADCS
Sbjct: 363 LFSEHFTKFLMENPAVGRQVVEKGLLASKARQAAKRAREMTRRKGALEISNLPGKLADCS 422
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PE+ E+FIVEGDSAGGSAKQGR R FQ I+ P++ I A
Sbjct: 423 SNDPEKCELFIVEGDSAGGSAKQGRSREFQAIL-PIRGKILNVEKA 467
>gi|227498783|ref|ZP_03928923.1| type IIA topoisomerase [Acidaminococcus sp. D21]
gi|352683418|ref|YP_004895401.1| type IIA topoisomerase [Acidaminococcus intestini RyC-MR95]
gi|226904235|gb|EEH90153.1| type IIA topoisomerase [Acidaminococcus sp. D21]
gi|350278071|gb|AEQ21261.1| type IIA topoisomerase [Acidaminococcus intestini RyC-MR95]
Length = 648
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 237/474 (50%), Positives = 327/474 (68%), Gaps = 19/474 (4%)
Query: 69 KENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
+E V YG+EQIQVLEGLEAVRKRP+MYIGS RGLHHLVYE++DN++DEA AGY
Sbjct: 12 EEIAVHGEYGAEQIQVLEGLEAVRKRPSMYIGSISARGLHHLVYEVIDNSIDEALAGYCD 71
Query: 129 NIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 188
+I V + DNS++V DNGRGIP+++H K A+E V+T+LHAGGKFG GY VSGGL
Sbjct: 72 HILVEIGEDNSITVVDNGRGIPVEMHK-IGKPAIEVVMTILHAGGKFG--DGGYKVSGGL 128
Query: 189 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 248
HGVG+S VNALS +EV V +DG Y ++S+GK V L D+KD GT + FWP
Sbjct: 129 HGVGVSCVNALSRRMEVEVKKDGKIYGIEFSKGKTVRPLYVKG-ECDAKD-TGTSVHFWP 186
Query: 249 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQ 308
D +FT + + + T+ RIRELAFLN + I L+ + S ++ + + GG+ +V+
Sbjct: 187 DDTIFTETV-YSYETLKHRIRELAFLNKGVKIELKDDRSGADEI----FHYEGGIISFVE 241
Query: 309 WLNTDKKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 364
++N K+ + + V G R+D +++A+Q+ +DAY++ + + N+I T +GGTH+
Sbjct: 242 YINKGKEAIFNTPIYVEGERQDT---IVEVAMQY-TDAYTENIYTFVNNINTEEGGTHLA 297
Query: 365 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 424
G+K +LTR++N +K+ +KD + +LSG+ VREGLTC++S++V P+FEGQTKT+LGN
Sbjct: 298 GLKQALTRSINDYARKNGLLKDSEENLSGDDVREGLTCVLSLKVREPQFEGQTKTKLGNS 357
Query: 425 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 484
EVR +VD V + L EY E + I+ K++ + +A AA++ARDL R+KS L SSL
Sbjct: 358 EVRGIVDNMVSDALNEYFEENAPTAKKIVEKAILSSRARAAARKARDLTRRKSALEVSSL 417
Query: 485 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PGKLADCSS EE+EI+IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 418 PGKLADCSSKNAEETEIYIVEGDSAGGSAKQGRDRAFQAIL-PLRGKILNVEKA 470
>gi|313147892|ref|ZP_07810085.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|423281169|ref|ZP_17260080.1| DNA gyrase, B subunit [Bacteroides fragilis HMW 610]
gi|424665894|ref|ZP_18102930.1| DNA gyrase, B subunit [Bacteroides fragilis HMW 616]
gi|313136659|gb|EFR54019.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|404574147|gb|EKA78898.1| DNA gyrase, B subunit [Bacteroides fragilis HMW 616]
gi|404583333|gb|EKA88014.1| DNA gyrase, B subunit [Bacteroides fragilis HMW 610]
Length = 652
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/474 (47%), Positives = 318/474 (67%), Gaps = 13/474 (2%)
Query: 69 KENPVSK-TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYA 127
++NP + +Y ++ IQVLEGLEAVRKRPAMYIG +GLHHLVYEI+DN++DEA AGY
Sbjct: 4 EQNPTNNGSYSADSIQVLEGLEAVRKRPAMYIGDISVKGLHHLVYEIVDNSIDEALAGYC 63
Query: 128 SNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGG 187
+IEV + DNS++V DNGRGIP+D H KSALE +TVLHAGGKF S Y VSGG
Sbjct: 64 DHIEVTINEDNSITVQDNGRGIPVDFHEKEQKSALEVAMTVLHAGGKFDKGS--YKVSGG 121
Query: 188 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 247
LHGVG+S VNALS + V+R+G Y Q+Y GKP+ V V + D GT+ +FW
Sbjct: 122 LHGVGMSCVNALSTHMTTQVFRNGKIYQQEYEIGKPLYA----VKEVGTADHTGTKQQFW 177
Query: 248 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL--RKEDSDPEKNQYNEYFFAGGLEE 305
PD +FT + +D+ +A R+RELA+LN L I+L R+ ++ ++ ++ GL E
Sbjct: 178 PDDSIFTETV-YDYKILASRLRELAYLNAGLRISLTDRRVINEDGSFKHETFYSEEGLRE 236
Query: 306 YVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 364
+V+++ + ++ L +DV+ + I I++A+ + + +S+ + Y N+I TI+GGTH+
Sbjct: 237 FVRFIESSREHLINDVIYLNTEKQNIPIEVAIMYNT-GFSENIHSYVNNINTIEGGTHLA 295
Query: 365 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 424
G + +LTRTL + SK ++ I +SG+ REGLT +ISV+V P+FEGQTKT+LGN
Sbjct: 296 GFRRALTRTLKKYAEDSKMLEKVKIEISGDDFREGLTAVISVKVAEPQFEGQTKTKLGNN 355
Query: 425 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 484
EV VDQ+V E L YLE HP +I+ K + A A AA++AR++V++KS + L
Sbjct: 356 EVMGAVDQAVGEVLNYYLEEHPKEAKAIVDKVILAATARHAARKAREMVQRKSPMSGGGL 415
Query: 485 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PGKLADCS P++ E+F+VEGDSAGG+AKQGR+R FQ I+ PL+ I A
Sbjct: 416 PGKLADCSDKDPQKCELFLVEGDSAGGTAKQGRNRAFQAIL-PLRGKILNVEKA 468
>gi|423082996|ref|ZP_17071578.1| DNA gyrase, B subunit [Clostridium difficile 002-P50-2011]
gi|423086520|ref|ZP_17074925.1| DNA gyrase, B subunit [Clostridium difficile 050-P50-2011]
gi|357546724|gb|EHJ28633.1| DNA gyrase, B subunit [Clostridium difficile 050-P50-2011]
gi|357547075|gb|EHJ28974.1| DNA gyrase, B subunit [Clostridium difficile 002-P50-2011]
Length = 633
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 237/462 (51%), Positives = 323/462 (69%), Gaps = 12/462 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ QIQVLEGLEAVRKRP MYIGST PRGLHHLVYE++DN++DEA GY S+I V
Sbjct: 1 MKQEYGASQIQVLEGLEAVRKRPGMYIGSTSPRGLHHLVYEVVDNSIDEALQGYCSDIYV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
++ D SV V DNGRGIP+++HP T KS LETVLT LHAGGKFGG VSGGLHGVG
Sbjct: 61 SINEDGSVLVKDNGRGIPVEIHPKTGKSTLETVLTNLHAGGKFGGGGY--KVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ + V+ +G Y Q Y +G P + L V +GT I+F PD+ +
Sbjct: 119 VSVVNALSKWMVAEVYLNGKIYKQTYEKGLPTSKLEV----VGESQDKGTMIQFMPDETI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F I+F + T+ R+REL+FLN + I ED + + E+ + GGL EY+++LN
Sbjct: 175 FD-EIEFKYETLEYRLRELSFLNKGIKIVF--EDKREGQEKRKEFHYTGGLVEYIKYLNK 231
Query: 313 DKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+ +HD +V K VD ++LA+Q+ +D Y++ + +AN+I T +GG+H+ G KA+LT
Sbjct: 232 SRTGIHDDIVYIDKKVDDCFVELAMQY-TDGYTENIYSFANNINTHEGGSHLSGFKAALT 290
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
+T+N K++K +K+ D++L GE +REGLT ++SV++P P+FEGQTKT+LGN +R +VD
Sbjct: 291 KTVNDYAKRNKFLKENDVNLLGEDIREGLTAVVSVKLPEPQFEGQTKTKLGNSFMRGIVD 350
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+ L +LE +P I+ K+L A +A AAK+AR+L R+KSVL S+SLPGKLADC
Sbjct: 351 SVTVDELGSFLEENPATARIIVDKALRAQRAREAAKKARELTRRKSVLESTSLPGKLADC 410
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
+ P +SEIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 411 AEKDPSKSEIFLVEGDSAGGSAKQGRDRNSQAIL-PLRGKIL 451
>gi|118578453|ref|YP_899703.1| DNA gyrase subunit B [Pelobacter propionicus DSM 2379]
gi|118501163|gb|ABK97645.1| DNA gyrase subunit B [Pelobacter propionicus DSM 2379]
Length = 802
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/458 (49%), Positives = 318/458 (69%), Gaps = 13/458 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ I+VLEGL AVRKRPAMYIGST GLHHLVYEI+DN++DEA AG+ NI V +
Sbjct: 15 YSADNIKVLEGLAAVRKRPAMYIGSTSGAGLHHLVYEIVDNSIDEALAGHCDNISVTINV 74
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV+V DNGRGIP D+HP +SA E VLTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 75 DGSVTVIDNGRGIPTDMHPTEGRSAAEVVLTVLHAGGKFDNDS--YKVSGGLHGVGVSVV 132
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS+ LE+ + RDG + Q Y RG PV L + ++GT++ F PD+++F T
Sbjct: 133 NALSKWLELEIKRDGKIFRQSYRRGDPVAPLA----ETGATRKRGTKVTFMPDEEIFETT 188
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+F + ++ R+RELAFLN + I + D N+ +E+++ GG+ +V++LN +K
Sbjct: 189 -EFSFDVLSQRLRELAFLNAGVRIGISDMRVD---NKSHEFYYEGGINSFVEYLNRNKIA 244
Query: 317 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
+H + FR + G+ ++++Q+ +D++ + + +AN+I T +GGTH+ G KA+LTRT+N
Sbjct: 245 VHPKPIYFRGEKGGVETEVSMQY-NDSFDEKIFSFANNINTHEGGTHLVGFKAALTRTMN 303
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+ + +K + +S+SG+ +REGLTC+ISV++P P+FEGQTKT+LGN EV+ V+ +
Sbjct: 304 AYAAANNLLKKEKVSISGDDLREGLTCVISVKIPQPQFEGQTKTKLGNSEVKGYVESMIN 363
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L ++LE +P V IL KS+ A +A AA+RAR+ VR+K L LPGKLADC
Sbjct: 364 EKLAQFLEENPQVAKRILEKSIEAARAREAARRARETVRRKGALDLGGLPGKLADCQEKN 423
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
PE E+++VEGDSAGGSAKQGRDR+FQ I+ PL+ I
Sbjct: 424 PEHCELYLVEGDSAGGSAKQGRDRKFQAIL-PLKGKIL 460
>gi|294495525|ref|YP_003542018.1| DNA gyrase subunit B [Methanohalophilus mahii DSM 5219]
gi|292666524|gb|ADE36373.1| DNA gyrase subunit B [Methanohalophilus mahii DSM 5219]
Length = 634
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/458 (50%), Positives = 317/458 (69%), Gaps = 13/458 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRP+MYIGS RGLHHLVYE++DN++DEA AGY ++I+V++
Sbjct: 7 YDATHIQVLEGLEAVRKRPSMYIGSIDGRGLHHLVYEVVDNSIDEALAGYCTSIDVSINR 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV+V D+GRGIP D+H KSALE V+T+LHAGGKF SS Y VSGGLHGVG+SVV
Sbjct: 67 DGSVTVRDDGRGIPTDIHSKYKKSALEVVMTILHAGGKFDKSS--YKVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE +V V R+G ++Q+Y RGKP+ V+ + GT + F PD +F T
Sbjct: 125 NALSEWNDVEVHRNGKIFYQRYVRGKPLD----DVIEKGDTESTGTSMTFKPDTDIFET- 179
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+ F+ T+ R+RELAFLN + I + + SD + EY GG+ +V++LN +
Sbjct: 180 VDFNFETLVTRLRELAFLNRGIKIVITDKRSDEPLQEVFEY--DGGIVSFVEYLNKSRNV 237
Query: 317 LHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LH+ + F ++ + +++A+Q+ +D+Y + + +AN+I T +GGTH+ G K++LTR N
Sbjct: 238 LHEQPIYFEREKEDTRVEIAMQY-TDSYGEYVYSFANNINTHEGGTHLAGFKSALTRVAN 296
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
K + K DI LSG+ +REGL IISV++ +P+FEGQTKT+LGN E++ +VD V
Sbjct: 297 DYAKSNNLAK-GDIKLSGDDIREGLAGIISVKLMDPQFEGQTKTKLGNSELKGIVDSMVS 355
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L+E++E +P + +IL K++ A +A AAK+AR+L R+KS L S+LPGKLADCS
Sbjct: 356 EGLSEFMEENPKIASAILQKAMDARRAREAAKKARELTRRKSALEVSTLPGKLADCSEKD 415
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P SEI++VEGDSAGGSAK GRDRRFQ I+ P + I
Sbjct: 416 PSVSEIYLVEGDSAGGSAKMGRDRRFQAIL-PFRGKIL 452
>gi|383625257|ref|ZP_09949663.1| DNA gyrase subunit B [Halobiforma lacisalsi AJ5]
gi|448700123|ref|ZP_21699344.1| DNA gyrase subunit B [Halobiforma lacisalsi AJ5]
gi|445780025|gb|EMA30936.1| DNA gyrase subunit B [Halobiforma lacisalsi AJ5]
Length = 644
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/461 (50%), Positives = 321/461 (69%), Gaps = 10/461 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +I V +
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVTIHE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSVAD+GRGIP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DRSVSVADDGRGIPVDTHEEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LE V RDG Y + G+PV + V ++S + GT IRFWPD+ +F A
Sbjct: 125 NALSERLEAEVKRDGGVYRHAFEAGEPVGDME-RVRDMESDEETGTEIRFWPDESIFE-A 182
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALR---KEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
F +T++ R+RELAFLN + I+LR +E +D E Y + GG+ E+V++LN
Sbjct: 183 DDFSFSTLSNRLRELAFLNSGVRISLRDEREEAADAEGIIEETYEYEGGIREFVEYLNET 242
Query: 314 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
+ +H+ V+ F + I +++A+Q ++ ++ +AN+I T +GGTH+ G K +LTR
Sbjct: 243 RSAMHEEVIYFEDEAQNIQVEVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTR 301
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
T+N ++ + D D +L GE +REGLT ++S++ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 302 TVNDYANENDLLGDLDENLKGEDIREGLTAVVSIKHPDPQFEGQTKTKLGNSEVRGIVES 361
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
++ E L Y E +PD ++I++K++ A KA AA++A +L R+KS L S+SLPGKLADC
Sbjct: 362 AMHEGLGTYFEENPDTAEAIINKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQ 421
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
+ P E+E+FI EGDSAGGSAKQ R+ FQ ++ P++ I
Sbjct: 422 TKDPGEAELFIAEGDSAGGSAKQARNPEFQAVL-PIKGKIL 461
>gi|348025743|ref|YP_004765548.1| DNA gyrase subunit B [Megasphaera elsdenii DSM 20460]
gi|341821797|emb|CCC72721.1| DNA gyrase subunit B [Megasphaera elsdenii DSM 20460]
Length = 639
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 236/466 (50%), Positives = 326/466 (69%), Gaps = 17/466 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+EQIQVLEGLEAVRKRP MYIGST RGLHHLVYE++DN++DEA AGY ++IEV +
Sbjct: 8 YGAEQIQVLEGLEAVRKRPGMYIGSTSTRGLHHLVYEVVDNSIDEALAGYCTHIEVTIQE 67
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNS++V DNGRGIP+ +H K A+E VLTVLHAGGKFGG GY +SGGLHGVG+SVV
Sbjct: 68 DNSITVVDNGRGIPVAMH-KIGKPAVEVVLTVLHAGGKFGGD--GYPISGGLHGVGISVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS +V V RDG + ++RG L + P+++ + GT++ F PD ++F
Sbjct: 125 NALSVWTKVQVKRDGYLWGISFTRGVTDEPLR-KIRPLEAGEETGTKVSFKPDHEIFPDT 183
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+ +D NT+ R+RELAFLN L I L + + + Y + GGL +V++LN +
Sbjct: 184 V-YDFNTLKTRLRELAFLNKGLHITLTDKRGE---GKSEVYCYEGGLTSFVEFLNQSHQA 239
Query: 317 LHDVVGFRKDVDG----ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
++ + +VDG + +D+A+Q+ +D YS+ +L + N I T +GGTH+ G ++ LTR
Sbjct: 240 VNPTI---INVDGEKNKVIVDIAMQY-NDGYSENILTFVNDIFTEEGGTHLSGFRSGLTR 295
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
T+N G+ + +K+ + +LSGE VREGLT +ISV+V P+FEGQTKT+LGN EV+ +VD
Sbjct: 296 TINDYGRSAGIIKENEDNLSGEDVREGLTAVISVKVREPQFEGQTKTKLGNSEVKGIVDN 355
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ + L E+ E HP +I++K++SA +A AA+RAR+L R+K+ L SSLPGKLADCS
Sbjct: 356 IISDGLKEFFEEHPSEAKAIITKTISASRARQAARRARELTRRKNALEISSLPGKLADCS 415
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P+++EI++VEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 416 EKNPDQTEIYLVEGDSAGGSAKQGRDRRFQAIL-PLRGKIINVEKA 460
>gi|429190218|ref|YP_007175896.1| DNA gyrase subunit B [Natronobacterium gregoryi SP2]
gi|448326129|ref|ZP_21515498.1| DNA gyrase subunit B [Natronobacterium gregoryi SP2]
gi|429134436|gb|AFZ71447.1| DNA gyrase, B subunit [Natronobacterium gregoryi SP2]
gi|445613038|gb|ELY66749.1| DNA gyrase subunit B [Natronobacterium gregoryi SP2]
Length = 644
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/461 (50%), Positives = 319/461 (69%), Gaps = 10/461 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +I V +
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVTIHE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSV D+GRGIP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DRSVSVTDDGRGIPVDTHEEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LE V RDG Y + G+PV + V ++S + GT IRFWPD +F +
Sbjct: 125 NALSERLEAEVKRDGGVYRHAFEGGEPVGDME-RVRDMESDEETGTEIRFWPDGSIFESD 183
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALR--KEDSDPEKNQYNE-YFFAGGLEEYVQWLNTD 313
+F +T+A R+RELAFLN + I LR +ED+D E Y + GG+ E+V++LN
Sbjct: 184 -EFSFSTLANRLRELAFLNSGVRITLRDEREDADDAAGVATETYEYEGGIREFVEYLNET 242
Query: 314 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
+ +H+ V+ F + I +++A+Q + ++ +AN+I T +GGTH+ G K +LTR
Sbjct: 243 RSAMHETVIYFEDETQNIHVEVAMQ-ATKELQGSIHAFANNINTREGGTHLTGFKTALTR 301
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
T+N ++ + D D +L GE +REGLT ++S++ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 302 TVNDYANENDLLSDLDENLKGEDIREGLTAVVSIKHPDPQFEGQTKTKLGNSEVRGIVES 361
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
++ + L Y E PD ++I++K++ A KA AA++A +L R+KS L S+SLPGKLADC
Sbjct: 362 AMHDGLGTYFEEQPDTAEAIVTKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQ 421
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
+ PEE+E+FI EGDSAGGSAKQ R+ FQ I+ P++ I
Sbjct: 422 TKDPEEAELFIAEGDSAGGSAKQARNPDFQAIL-PIKGKIL 461
>gi|284165545|ref|YP_003403824.1| DNA gyrase B subunit [Haloterrigena turkmenica DSM 5511]
gi|284015200|gb|ADB61151.1| DNA gyrase, B subunit [Haloterrigena turkmenica DSM 5511]
Length = 644
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/461 (50%), Positives = 319/461 (69%), Gaps = 10/461 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +I V++
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVSIND 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSVAD+GRGIP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVADDGRGIPVDTHDEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LE V RDG + + G+PV + V ++ + GT+IRFWPD +F +
Sbjct: 125 NALSERLEAEVKRDGSVFRHAFEAGEPVGDME-RVRDMEPDEETGTQIRFWPDTGIFESG 183
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQ---YNEYFFAGGLEEYVQWLNTD 313
+F +T++ R+RELAFLN + I LR E + + Y + GG+ E+V++LN
Sbjct: 184 -EFSFSTLSNRLRELAFLNSGVHITLRDEREEATEGDDLVEETYEYQGGIREFVEYLNET 242
Query: 314 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
+ +HD V+ F + I +++A+Q ++ ++ +AN+I T +GGTH+ G K +LTR
Sbjct: 243 RSAMHDDVIYFEAEEQNIQVEVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTR 301
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
T+N K + + D + +L GE +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 302 TVNDYAKDNDMLGDLEDNLKGEDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVES 361
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
S+ E L Y E HPD +I++K++ A KA AA++A +L R+KS L S+SLPGKLADC
Sbjct: 362 SMHEGLGTYFEEHPDTAQAIVTKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQ 421
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
+ P+E+E+FI EGDSAGGSAKQ R+ FQ I+ P++ I
Sbjct: 422 TKDPDEAELFIAEGDSAGGSAKQARNPDFQAIL-PIKGKIL 461
>gi|239825589|ref|YP_002948213.1| DNA gyrase subunit B [Geobacillus sp. WCH70]
gi|239805882|gb|ACS22947.1| DNA gyrase, B subunit [Geobacillus sp. WCH70]
Length = 640
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 248/473 (52%), Positives = 325/473 (68%), Gaps = 18/473 (3%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E + TY + QIQVLEGLEAVRKRP MYIGSTGP+GLHHLV+EI+DN++DEA AGY +
Sbjct: 4 EQKIEHTYDASQIQVLEGLEAVRKRPGMYIGSTGPKGLHHLVWEIVDNSIDEALAGYCTE 63
Query: 130 IEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 189
I V + DN +++ DNGRGIP+D+ + A+E ++TVLHAGGKFGG VSGGLH
Sbjct: 64 INVTIEKDNIIAITDNGRGIPVDIQEKMGRPAVEVIMTVLHAGGKFGGGGY--KVSGGLH 121
Query: 190 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 249
GVG SVVNALSE LEV V RDG ++QKY RG P T L + DR GT +RF PD
Sbjct: 122 GVGASVVNALSEELEVYVHRDGKIHYQKYQRGVPCTDLEV----IGETDRTGTTVRFKPD 177
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 309
++FT +FD+ T+A R+RELAFLN L I L ED E N+ NEY + GG++ YV+
Sbjct: 178 PEIFTETTEFDYETLATRLRELAFLNRGLKITL--EDKRVE-NRKNEYHYEGGIKSYVKH 234
Query: 310 LNTDKKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 365
LN ++ LH+ ++G R DGI +++ALQ+ +D+YS + + N+I T +GGTH G
Sbjct: 235 LNRTREVLHEEPIYIIGER---DGIYVEIALQY-NDSYSSNIYSFVNNIHTHEGGTHESG 290
Query: 366 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 425
K +LTR +N +K + +KD D +L+GE VREGLT I+S++ P+P+FEGQTKT+LGN +
Sbjct: 291 FKTALTRIINDYARKHQILKDNDPNLTGEDVREGLTAIVSIKHPSPQFEGQTKTKLGNSD 350
Query: 426 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 485
R V D E +L +P + I+ K + A +A LAAK+AR+L R+KS L S+LP
Sbjct: 351 ARAVTDAIFSEQFETFLLENPTIARKIVEKGMMAARARLAAKKARELTRRKSALEISNLP 410
Query: 486 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
GKLADCSS P SE+++VEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 411 GKLADCSSKDPSISELYVVEGDSAGGSAKQGRDRHFQAIL-PLRGKIINVEKA 462
>gi|414154088|ref|ZP_11410408.1| DNA gyrase subunit B [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411454273|emb|CCO08312.1| DNA gyrase subunit B [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 638
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 236/469 (50%), Positives = 317/469 (67%), Gaps = 18/469 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ Y ++QIQVLEGLEAVR+RP MYIGST RGLHHLVYE++DN++DEA AGY I V
Sbjct: 7 TNKYSADQIQVLEGLEAVRRRPGMYIGSTSARGLHHLVYEVVDNSIDEALAGYCDKIAVT 66
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNSV+V DNGRGIP+D+HP K A+E VLT+LHAGGKFGG S LHGVG+
Sbjct: 67 VHRDNSVTVEDNGRGIPVDIHPKVGKPAVEVVLTMLHAGGKFGGGGYKVSGG--LHGVGV 124
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE L V + R+G Y Q+++RG P T L + GT++ F PD ++F
Sbjct: 125 SVVNALSEILSVEIKRNGHIYRQEFARGIPTTELKI----IGKSKSTGTKVTFKPDAEIF 180
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
+ F T+ RIRELA+LN + I L+ E DP Q + F GG++++V+ LN
Sbjct: 181 EELV-FSLETLTQRIRELAYLNKGVKITLKDERKDPPVEQV--FQFEGGIKDFVKHLNKT 237
Query: 314 KKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
K+ LH + G R+ V ++ ALQ+ +D Y++TML YAN+I T+DGGTH G+K +
Sbjct: 238 KQVLHPKPIYISGEREQV---IVEAALQY-NDGYTETMLSYANNIHTVDGGTHEIGLKTA 293
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
LTR +N G+ +K+ D +L+GE +REG T +ISV+VP P+FEGQTKT+LGN EVR +
Sbjct: 294 LTRVVNDYGRNHNILKNNDANLTGEDIREGATIVISVKVPEPQFEGQTKTKLGNSEVRGI 353
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
V+ E + +L+ +P V I+ K+++A + AA++AR+L R+KS L + SLPGKLA
Sbjct: 354 VESIFAEKFSTFLDENPSVAKKIIEKAVTAARVREAARKARELTRRKSALETMSLPGKLA 413
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
DCS P SE+++VEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 414 DCSEKDPSISELYLVEGDSAGGSAKQGRDRRFQAIL-PLRGKIINVEKA 461
>gi|313900991|ref|ZP_07834481.1| DNA gyrase, B subunit [Clostridium sp. HGF2]
gi|346314835|ref|ZP_08856352.1| DNA gyrase subunit B [Erysipelotrichaceae bacterium 2_2_44A]
gi|373123464|ref|ZP_09537310.1| DNA gyrase, B subunit [Erysipelotrichaceae bacterium 21_3]
gi|312954411|gb|EFR36089.1| DNA gyrase, B subunit [Clostridium sp. HGF2]
gi|345905773|gb|EGX75510.1| DNA gyrase subunit B [Erysipelotrichaceae bacterium 2_2_44A]
gi|371660797|gb|EHO26041.1| DNA gyrase, B subunit [Erysipelotrichaceae bacterium 21_3]
Length = 647
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/471 (48%), Positives = 327/471 (69%), Gaps = 13/471 (2%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E+ V +Y ++ IQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AG+A++
Sbjct: 13 EDKVDHSYTADDIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGFATD 72
Query: 130 IEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 189
IE+ + +N + V DNGRG+P + T S +ET+ TVLHAGGKFGG + Y VSGGLH
Sbjct: 73 IEITIEKNNIIRVEDNGRGMPTGIVEKTGISGVETIFTVLHAGGKFGGGA--YKVSGGLH 130
Query: 190 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 249
GVG SVVNALSE LEV V ++G E+ ++ G T + ++ ++ G+ +RF D
Sbjct: 131 GVGASVVNALSEWLEVNVHQNGHEFFLRFEDGGKATG---PLKIINDSEKHGSIVRFKAD 187
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE-DSDPEKNQYNEYFFAGGLEEYVQ 308
++F ++D +T+ RIR+LAFLN + + L E +++P++ EY + GG+ +YV+
Sbjct: 188 PEIFQETQEYDFDTLNARIRQLAFLNKSIRLVLCDEREAEPKRI---EYKYDGGIRQYVE 244
Query: 309 WLNTDKKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
+LN +K PLH+ V + + + DGI ++A+Q+ +D Y ++ + N+I T++GGTH +G +
Sbjct: 245 YLNKNKTPLHEEVVYVEGIEDGILAEIAMQY-NDGYIPSIYSFCNNINTMEGGTHEDGFR 303
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
+LTR +N+ ++ +K KD +L+G+ VREGLT IISV+ P+P++EGQTKT+LGN EVR
Sbjct: 304 LALTRIINAYAREQGMIK-KDETLAGDDVREGLTAIISVKHPDPQYEGQTKTKLGNSEVR 362
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
K+V + E L + +P+ I+ K++ A KA LAAK+AR+L R+KS L +SLPGK
Sbjct: 363 KIVSSILGEQLDRFFMENPETAKIIVDKAILASKARLAAKKARELTRRKSALEITSLPGK 422
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LADCSS E EI+IVEGDSAGGSAKQGR+ +FQ I+ PL+ I A
Sbjct: 423 LADCSSKDASECEIYIVEGDSAGGSAKQGRNSKFQAIL-PLRGKILNVEKA 472
>gi|255692967|ref|ZP_05416642.1| DNA gyrase, B subunit [Bacteroides finegoldii DSM 17565]
gi|423301203|ref|ZP_17279227.1| DNA gyrase, B subunit [Bacteroides finegoldii CL09T03C10]
gi|260621278|gb|EEX44149.1| DNA gyrase, B subunit [Bacteroides finegoldii DSM 17565]
gi|408471804|gb|EKJ90333.1| DNA gyrase, B subunit [Bacteroides finegoldii CL09T03C10]
Length = 652
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/470 (48%), Positives = 317/470 (67%), Gaps = 12/470 (2%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
P + +Y ++ IQVLEGLEAVRKRPAMYIG +GLHHLVYEI+DN++DEA AGY ++IE
Sbjct: 8 PNNGSYSADSIQVLEGLEAVRKRPAMYIGDISVKGLHHLVYEIVDNSIDEALAGYCTHIE 67
Query: 132 VALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 191
V + DNS++V DNGRGIP+D H KSALE +TVLHAGGKF S Y VSGGLHGV
Sbjct: 68 VTINEDNSITVQDNGRGIPVDYHEKEKKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGV 125
Query: 192 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 251
G+S VNALS + V+R G Y Q+Y GKP+ + V V + D GTR +FWPD
Sbjct: 126 GMSCVNALSTHMTTQVFRGGKIYQQEYEIGKPLYS----VKEVGTSDITGTRQQFWPDGS 181
Query: 252 VFTTAIQFDHNTIAGRIRELAFLNPKLTIAL--RKEDSDPEKNQYNEYFFAGGLEEYVQW 309
+FT + +D+ +A R+RELA+LN L I+L R+ ++ + +++ GL E+V++
Sbjct: 182 IFTETV-YDYKILASRLRELAYLNAGLRISLTDRRVVNEDGSFKSEQFYSEEGLREFVRF 240
Query: 310 LNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+ + ++ L +DV+ + GI I++A+ + + +S+ + Y N+I TI+GGTH+ G +
Sbjct: 241 IESSREHLINDVIYLNSEKQGIPIEVAIMYNT-GFSENVHSYVNNINTIEGGTHLAGFRR 299
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
+LTRTL + SK ++ + +SG+ REGLT +ISV+V P+FEGQTKT+LGN EV
Sbjct: 300 ALTRTLKKYAEDSKMLEKVKVEISGDDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVMG 359
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
VDQ+V E L+ YLE HP +I+ K + A A AA++AR++V++KS + LPGKL
Sbjct: 360 AVDQAVGEVLSYYLEEHPKEAKTIVDKVILAATARHAARKAREMVQRKSPMSGGGLPGKL 419
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
ADCS P + E+F+VEGDSAGG+AKQGR+R FQ I+ PL+ I A
Sbjct: 420 ADCSDKDPSKCELFLVEGDSAGGTAKQGRNRMFQAIL-PLRGKILNVEKA 468
>gi|421186532|ref|ZP_15643923.1| DNA gyrase subunit B [Oenococcus oeni AWRIB418]
gi|399966874|gb|EJO01375.1| DNA gyrase subunit B [Oenococcus oeni AWRIB418]
Length = 652
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 224/466 (48%), Positives = 315/466 (67%), Gaps = 9/466 (1%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ +YG IQ+LEGLEAVRKRP MYIGST GLHHLV+EI+DN +DEA AG+A ++ +
Sbjct: 15 NNSYGGSSIQILEGLEAVRKRPGMYIGSTASSGLHHLVWEIIDNGIDEALAGFAHHVTLT 74
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS+++ D+GRG+P+++ P T + A+E V T+LHAGGKF S Y VSGGLHGVG
Sbjct: 75 IEKDNSITITDDGRGVPVEIQPKTGRPAMEAVFTILHAGGKF--DSKSYKVSGGLHGVGA 132
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ ++V V+RD Y+ + RG T + P+ K +GT + F PD +F
Sbjct: 133 SVVNALSKEMDVRVYRDNKIYYMDFERGHIKTEMKLLDEPMRLK--RGTIVHFAPDPDIF 190
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
I FD+ T+A RIRELAFLN L +++ + DP KN+ + + GG+ EYV++LN +
Sbjct: 191 RETIVFDYRTLASRIRELAFLNKGLRLSITDKRVDPVKNE--SFMYEGGIAEYVKFLNKN 248
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+PL + V + +GI +++ALQ+ +DA ++T++ + N+I T +GGTH G K +LTR
Sbjct: 249 KQPLFPEPVYVEGEENGIQVEVALQY-TDAVAETLMSFTNNIHTHEGGTHETGFKMALTR 307
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N KK +KD D LSGE VREG+T I+S++ P+P+FEGQTKT+LGN + ++ V+
Sbjct: 308 IINDYAKKKGILKDSDDPLSGEDVREGITAIVSIKHPDPQFEGQTKTKLGNTDAQQAVNH 367
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
++ +P+ +I +K L A KA +AAK+ARDL R+KS L S+L GKLAD +
Sbjct: 368 QFSTIFNRFMMENPETARAIANKGLIASKARVAAKKARDLTRKKSGLEISALAGKLADNT 427
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PE SE+FIVEGDSAGGSAKQGR R Q I+ P++ I A
Sbjct: 428 SRDPEISELFIVEGDSAGGSAKQGRSRLTQAIL-PIRGKILNVEKA 472
>gi|329121792|ref|ZP_08250408.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Dialister
micraerophilus DSM 19965]
gi|327468065|gb|EGF13553.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Dialister
micraerophilus DSM 19965]
Length = 646
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/463 (50%), Positives = 319/463 (68%), Gaps = 12/463 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ I+VLEGLEAVR RP MYIGST RGLHHLVYE++DN++DEA AG+ ++IEV+L
Sbjct: 18 YSAKDIRVLEGLEAVRLRPGMYIGSTSARGLHHLVYEVVDNSIDEALAGFCTHIEVSLND 77
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D S +V DNGRGIP +H T + A+E VLTVLHAGGKFGG GY++SGGLHGVG+SVV
Sbjct: 78 DGSCTVVDNGRGIPTGMHE-TGRPAMEVVLTVLHAGGKFGGE--GYAISGGLHGVGISVV 134
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE +V V RDG + + RG ++ + GT + F PD +F
Sbjct: 135 NALSEWTKVNVRRDGKFHEMAFCRGDVSESMRTY----GETSETGTTVTFKPDPLIFKEG 190
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
FD++T+ R+RELAFLN L I L D+ ++ E+ +AGG+ E++++LN K
Sbjct: 191 TDFDYDTLKVRMRELAFLNKGLRITL--SDNRDGVSRVEEFHYAGGIVEFIKFLNEGKDA 248
Query: 317 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
+HD V+ F + D I +D+A+Q+ + YS++M + N I T +GG H+ G +++LTRT+N
Sbjct: 249 VHDDVISFEGERDKIIVDIAMQYQT-GYSESMYTFVNDINTTEGGMHLSGFRSALTRTIN 307
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+ + +K+ + +L+G+ VREGLTC+ISV+VPNP+FEGQTKT+LGN EV+ VVD V
Sbjct: 308 DYARTNNLLKENEDNLTGDDVREGLTCVISVKVPNPQFEGQTKTKLGNLEVKGVVDNIVS 367
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L YLE HP I+ K ++A +A AAKRAR+L R+K+ L SSLPGKL+DCS
Sbjct: 368 EGLHIYLEEHPSEARLIVEKGITASRAREAAKRARELTRRKNALEVSSLPGKLSDCSEKD 427
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P+++EI+IVEGDSAGGSAK GRDRR+Q I+ PL+ I A
Sbjct: 428 PKKTEIYIVEGDSAGGSAKSGRDRRYQAIL-PLRGKILNVEKA 469
>gi|73747960|ref|YP_307199.1| DNA gyrase subunit B [Dehalococcoides sp. CBDB1]
gi|147668656|ref|YP_001213474.1| DNA gyrase subunit B [Dehalococcoides sp. BAV1]
gi|452202849|ref|YP_007482982.1| DNA gyrase subunit B [Dehalococcoides mccartyi DCMB5]
gi|452204330|ref|YP_007484459.1| DNA gyrase subunit B [Dehalococcoides mccartyi BTF08]
gi|73659676|emb|CAI82283.1| DNA gyrase, subunit B [Dehalococcoides sp. CBDB1]
gi|146269604|gb|ABQ16596.1| DNA gyrase subunit B [Dehalococcoides sp. BAV1]
gi|452109908|gb|AGG05640.1| DNA gyrase subunit B [Dehalococcoides mccartyi DCMB5]
gi|452111386|gb|AGG07117.1| DNA gyrase subunit B [Dehalococcoides mccartyi BTF08]
Length = 642
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 240/466 (51%), Positives = 312/466 (66%), Gaps = 14/466 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S+TY + IQVLEGL AVRKRP MYIGST RGLHHLVYEI+ N+VDEA AG I+V
Sbjct: 13 SETYTASDIQVLEGLAAVRKRPGMYIGSTDQRGLHHLVYEIVYNSVDEAMAGVCDRIKVI 72
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ D SVSV DNGRGIP+D+H T SALETV+TVLHAG KFGG + Y VSGGLHGVG
Sbjct: 73 MFKDGSVSVEDNGRGIPVDIHSTTKISALETVMTVLHAGAKFGGKT--YQVSGGLHGVGA 130
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE V V R+G Y Q Y RGKP T L V + GT F D Q+F
Sbjct: 131 SVVNALSEWTTVKVRRNGKIYQQSYLRGKPSTPLE----EVGVSEGSGTTTIFMADSQIF 186
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
+T ++D T+ R+RE+A+LN L + + E SD E+ Y+F GG+ +V+ LN +
Sbjct: 187 STT-EYDFETLTDRLREIAYLNKGLEVYIYDEKSDQERT----YYFEGGITGFVRHLNRN 241
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
++ H + K D +++A+Q+ +D YSD+ L +AN + T+DGGTH+ G +++LTR
Sbjct: 242 REVRHRQPIYITKKSDSTILEVAIQY-NDGYSDSTLTFANCVNTVDGGTHLTGFRSALTR 300
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
N KSK +KD D +L G+ VREG+ I+SV++P P+FEGQTK +LGN E++ V+
Sbjct: 301 AFNDYAHKSKFLKDTDPNLMGDDVREGIVAIVSVKLPEPQFEGQTKGKLGNIEIKSFVES 360
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+V E L+ YLE HPD IL K ++A KA AA++ARDL+ +KS L + +LPGKLADCS
Sbjct: 361 AVAEQLSLYLEEHPDDTKRILEKCITAAKAREAARKARDLIIRKSALDTGTLPGKLADCS 420
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
E+F+VEGDSAGGSAKQGR+RRFQ I+ PL+ I A
Sbjct: 421 ERDASLCELFLVEGDSAGGSAKQGRNRRFQAIL-PLRGKILNVEKA 465
>gi|153809174|ref|ZP_01961842.1| hypothetical protein BACCAC_03484 [Bacteroides caccae ATCC 43185]
gi|423220418|ref|ZP_17206913.1| DNA gyrase, B subunit [Bacteroides caccae CL03T12C61]
gi|149128150|gb|EDM19370.1| DNA gyrase, B subunit [Bacteroides caccae ATCC 43185]
gi|392623495|gb|EIY17598.1| DNA gyrase, B subunit [Bacteroides caccae CL03T12C61]
Length = 652
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/470 (48%), Positives = 316/470 (67%), Gaps = 12/470 (2%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
P + +Y ++ IQVLEGLEAVRKRPAMYIG +GLHHLVYEI+DN++DEA AGY +IE
Sbjct: 8 PNNGSYSADSIQVLEGLEAVRKRPAMYIGDISIKGLHHLVYEIVDNSIDEALAGYCDHIE 67
Query: 132 VALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 191
V + DNS++V DNGRGIP+D H KSALE +TVLHAGGKF S Y VSGGLHGV
Sbjct: 68 VTINEDNSITVQDNGRGIPVDYHEKEKKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGV 125
Query: 192 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 251
G+S VNALS + V+R+G Y Q+Y GKP+ + V V + D GTR +FWPD
Sbjct: 126 GMSCVNALSTHMTTQVFRNGKIYQQEYEIGKPLYS----VKEVGTADITGTRQQFWPDDT 181
Query: 252 VFTTAIQFDHNTIAGRIRELAFLNPKLTIAL--RKEDSDPEKNQYNEYFFAGGLEEYVQW 309
+FT + +D+ +A R+RELA+LN L I L R+ ++ + +++ GL E+V++
Sbjct: 182 IFTETV-YDYKILASRLRELAYLNAGLRITLTDRRVVNEDGSFKSEQFYSEEGLREFVRF 240
Query: 310 LNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+ + ++ L +DV+ + GI I++A+ + + +S+ + Y N+I TI+GGTH+ G +
Sbjct: 241 IESSREHLINDVIYLNSEKQGIPIEVAIMYNT-GFSENVHSYVNNINTIEGGTHLAGFRR 299
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
+LTRTL + SK ++ + +SG+ REGLT +ISV+V P+FEGQTKT+LGN EV
Sbjct: 300 ALTRTLKKYAEDSKMLEKVKVEISGDDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVMG 359
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
VDQ+V E L+ YLE HP +I+ K + A A AA++AR++V++KS + LPGKL
Sbjct: 360 AVDQAVGEVLSYYLEEHPKEAKTIVDKVILAATARHAARKAREMVQRKSPMSGGGLPGKL 419
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
ADCS P + E+F+VEGDSAGG+AKQGR+R FQ I+ PL+ I A
Sbjct: 420 ADCSDKDPSKCELFLVEGDSAGGTAKQGRNRMFQAIL-PLRGKILNVEKA 468
>gi|95929989|ref|ZP_01312729.1| DNA gyrase, B subunit [Desulfuromonas acetoxidans DSM 684]
gi|95133958|gb|EAT15617.1| DNA gyrase, B subunit [Desulfuromonas acetoxidans DSM 684]
Length = 791
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/462 (49%), Positives = 313/462 (67%), Gaps = 14/462 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ Y +E I+VLEGL AVRKRPAMYIGST +GLHHLVYE++DN++DEA AG+ ++ V
Sbjct: 1 MENNYSAENIKVLEGLTAVRKRPAMYIGSTSSQGLHHLVYEVVDNSIDEALAGFCDSVYV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L D SV+V DNGRGIP+D H NKSA E V+TVLHAGGKF S Y VSGGLHGVG
Sbjct: 61 TLNVDGSVTVEDNGRGIPVDWHATENKSAAEVVMTVLHAGGKF--DSDTYKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS LE+ + R+G Y Q Y G P T L V ++GT+I FWPD +
Sbjct: 119 VSVVNALSSKLELEIRRNGKIYEQTYETGIPKTDLK----EVSDTIKKGTKITFWPDASI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F T +++ + ++ R+RELAFLN + + + +D + E+++ GG+ +V++LN
Sbjct: 175 FET-VEYSYEVLSKRLRELAFLNAGVRVTI----TDDRTEKVQEFYYEGGISSFVEYLNR 229
Query: 313 DKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
K PLH+ ++ F + +G+ I++A Q+ +D Y + + +AN+I T +GGTH+ G KA+LT
Sbjct: 230 AKNPLHNNIIFFNGEKEGVQIEIAFQY-NDGYDEKIYTFANNINTHEGGTHLVGFKAALT 288
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RT+N+ + +K+ S+SG+ +REG+ +ISV+VP+P+FEGQTKT+LGN E++ V+
Sbjct: 289 RTMNAYATANNLLKNIKASVSGDDLREGMAAVISVKVPDPQFEGQTKTKLGNSEIKGYVE 348
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+ E L YLE +P V IL K + A +A AA++ARDL R+K L SLPGKLADC
Sbjct: 349 TLINEKLAVYLEENPQVAKKILEKGIEAARAREAARKARDLTRRKGALDGLSLPGKLADC 408
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P SEI+IVEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 409 QEKDPALSEIYIVEGDSAGGSAKQGRDRSNQAIL-PLKGKIL 449
>gi|355674400|ref|ZP_09059585.1| DNA gyrase subunit B [Clostridium citroniae WAL-17108]
gi|354813963|gb|EHE98566.1| DNA gyrase subunit B [Clostridium citroniae WAL-17108]
Length = 637
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/467 (49%), Positives = 320/467 (68%), Gaps = 11/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG++QIQ+LEGLEAVRKRP MYIGST RGLHHLVYEI+DNAVDEA AGY +I+V
Sbjct: 1 MGEQYGADQIQILEGLEAVRKRPGMYIGSTSARGLHHLVYEIVDNAVDEALAGYCDSIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ +DNS++V D+GRGIP+D+ A+E V T+LHAGGKFG + GY VSGGLHGVG
Sbjct: 61 TINSDNSITVVDDGRGIPVDIQKKAGLPAVEVVFTILHAGGKFG--NGGYKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
SVVNALSE LEV V++DG Y Q+Y RGK T ++ ++ GT++ F PD ++
Sbjct: 119 ASVVNALSEWLEVQVFKDGNIYQQRYQRGK--VTYPLKIVGKCGPEQHGTKVTFLPDTEI 176
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F ++D++T+ R+RE AFL L I LR E E+ + + + GG++E+V +LN
Sbjct: 177 FEET-EYDYDTLKIRLRETAFLTKNLRITLRDE---REEKKEKTFHYEGGIKEFVTYLNK 232
Query: 313 DKKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
K PL++ V + + +G+ +++++Q +D+Y++ + + N+I T +GGTH+ G K +LT
Sbjct: 233 GKTPLYEQVIYCEGTKEGVFVEVSMQH-NDSYTENIYTFVNNINTPEGGTHLTGFKNALT 291
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
+T N +K+K +K+ + SLSGE +REGLT IIS++V P+FEGQTK +LGN E R VD
Sbjct: 292 KTFNDYARKNKLLKENEDSLSGEDIREGLTAIISIKVAEPQFEGQTKQKLGNSEARTAVD 351
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E LT +LE +P + ++ KS+ A +A AA++ARDL R+KS L +LPGKLADC
Sbjct: 352 NIVSEQLTYFLEQNPGIAKAMCEKSILAQRARAAARKARDLTRRKSALDGMALPGKLADC 411
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PE EI+IVEGDSAGGSAK R R Q I+ PL+ I A
Sbjct: 412 SDKNPENCEIYIVEGDSAGGSAKTARSRATQAIL-PLRGKILNVEKA 457
>gi|288574018|ref|ZP_06392375.1| DNA gyrase, B subunit [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288569759|gb|EFC91316.1| DNA gyrase, B subunit [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 637
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/466 (49%), Positives = 315/466 (67%), Gaps = 21/466 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ IQ+LEGLEAVRKRP MYIG T RGLHH VYE++DNAVDEA AGY S I+V +
Sbjct: 10 YTAQSIQILEGLEAVRKRPGMYIGDTATRGLHHCVYEVVDNAVDEALAGYCSEIKVTIHT 69
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSV+DNGRGIP+D HP+ + A E VLTVLHAGGKF + Y VSGGLHGVG+SVV
Sbjct: 70 DGSVSVSDNGRGIPVDPHPSNGRPACEVVLTVLHAGGKFNNDT--YKVSGGLHGVGVSVV 127
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS LE+ + R+G + Q++ +G PVT L D+ GT + F PD ++F
Sbjct: 128 NALSSWLELDICRNGKTWGQRFEKGIPVTDLEGGY----ETDKSGTTVHFMPDDEIF-EE 182
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+ F + R+RE+AFL P L I L D E+ ++ + + GGL +V++LN DK
Sbjct: 183 VCFSAEILGNRLREMAFLIPGLKITLI---DDREEKEWT-FHYEGGLASFVEYLNRDKSS 238
Query: 317 LHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
L V G R D I +++ LQ+ +D Y + + +AN I T++GGTH+ G+++++TR
Sbjct: 239 LFPKPIVVSGER---DSIFVEVGLQY-NDGYHERLFSFANLIHTMEGGTHVIGLRSAITR 294
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N +++K +KDKD +LSGE ++EGLTC+ISV++ +P+FEGQTKT+LGN EV+ +VD
Sbjct: 295 AINESARRNKVLKDKDANLSGEDLKEGLTCVISVKLGDPQFEGQTKTKLGNSEVKGIVDS 354
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
V E L L+ P VL ++ K++ A +A AAK+AR+LVR K+ + +LPGKLADCS
Sbjct: 355 IVYEGLLVALDEDPSVLKPVVDKAVKARQAREAAKKARELVR-KTAMTGLNLPGKLADCS 413
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PE E++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 414 GRIPENCEVYIVEGDSAGGSAKQGRDRAFQAIL-PLRGKILNVEKA 458
>gi|422325721|ref|ZP_16406749.1| DNA gyrase, B subunit [Erysipelotrichaceae bacterium 6_1_45]
gi|371667469|gb|EHO32594.1| DNA gyrase, B subunit [Erysipelotrichaceae bacterium 6_1_45]
Length = 647
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/471 (48%), Positives = 327/471 (69%), Gaps = 13/471 (2%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E+ V +Y ++ IQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AG+A++
Sbjct: 13 EDKVDHSYTADDIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGFATD 72
Query: 130 IEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 189
IE+ + +N + V DNGRG+P + T S +ET+ TVLHAGGKFGG + Y VSGGLH
Sbjct: 73 IEITIEKNNIIRVEDNGRGMPTGIVEKTGISGVETIFTVLHAGGKFGGGA--YKVSGGLH 130
Query: 190 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 249
GVG SVVNALSE LEV V ++G E+ ++ G T + ++ ++ G+ +RF D
Sbjct: 131 GVGASVVNALSEWLEVNVHQNGHEFFLRFEDGGKATG---PLKIINDSEKHGSIVRFKAD 187
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE-DSDPEKNQYNEYFFAGGLEEYVQ 308
++F ++D +T+ RIR+LAFLN + + L E +++P++ EY + GG+ +YV+
Sbjct: 188 PEIFQETQEYDFDTLNARIRQLAFLNKSIRLVLCDEREAEPKRI---EYKYDGGIRQYVE 244
Query: 309 WLNTDKKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
+LN +K PLH+ V + + + DGI ++A+Q+ +D Y ++ + N+I T++GGTH +G +
Sbjct: 245 YLNKNKTPLHEEVVYVEGIEDGILAEIAMQY-NDGYIPSIYSFCNNINTMEGGTHEDGFR 303
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
+LTR +N+ ++ +K KD +L+G+ VREGLT IISV+ P+P++EGQTKT+LGN EVR
Sbjct: 304 LALTRIINAYAREQGMIK-KDETLAGDDVREGLTAIISVKHPDPQYEGQTKTKLGNSEVR 362
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
K+V + E L + +P+ I+ K++ A KA LAAK+AR+L R+KS L +SLPGK
Sbjct: 363 KIVSSILGEQLDRFFMENPETAKIIVDKAILASKARLAAKKARELTRRKSALEITSLPGK 422
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LADCSS E EI+IVEGDSAGGSAKQGR+ +FQ I+ PL+ I A
Sbjct: 423 LADCSSKDASECEIYIVEGDSAGGSAKQGRNSKFQAIL-PLRGKILNVEKA 472
>gi|407641183|ref|YP_006804942.1| DNA gyrase subunit B [Nocardia brasiliensis ATCC 700358]
gi|407304067|gb|AFT97967.1| DNA gyrase subunit B [Nocardia brasiliensis ATCC 700358]
Length = 684
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 237/508 (46%), Positives = 325/508 (63%), Gaps = 40/508 (7%)
Query: 60 SSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAV 119
+ S A+ + N YG+ I VLEGLEAVRKRP MYIGSTG RGLHHL++E++DN+V
Sbjct: 4 NDSNASGSTNANSGKADYGASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSV 63
Query: 120 DEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSS 179
DEA AGYAS +EV LLAD V V D+GRGIP+ +H A +E V+T LHAGGKF S
Sbjct: 64 DEAMAGYASKVEVTLLADGGVEVVDDGRGIPVAMH-AQGVPTIEVVMTQLHAGGKF--DS 120
Query: 180 SGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDR 239
Y+VSGGLHGVG+SVVNALS LE + RDG + Q Y P ++ D+ +
Sbjct: 121 DSYAVSGGLHGVGISVVNALSSRLEAEIDRDGYHWSQSYKDSIP-----GKLVQGDASKQ 175
Query: 240 QGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE-------------- 285
GT IRFW D ++F T ++ T+A R++E+AFLN LTI L E
Sbjct: 176 TGTTIRFWADPEIFETTT-YNFETVARRLQEMAFLNKGLTITLTDERVSESEITDDVVSE 234
Query: 286 --------DSDPE------KNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGI 330
++D E K + Y + GGLE++V+ +N K+P+H+ VVGF G
Sbjct: 235 TAEAPKHAEADAEAAPVEHKVKTRTYHYPGGLEDFVRHINRTKQPIHNSVVGFTGKGTGH 294
Query: 331 TIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDIS 390
+++A+QW S YS+++ +AN+I T +GGTH EG +A+LT +N K K +K+KD +
Sbjct: 295 ELEVAMQWNS-GYSESVHTFANTINTHEGGTHEEGFRAALTTVVNKYAKDKKLIKEKDGN 353
Query: 391 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 450
L+G+ +REGL I+SV+V P+FEGQTKT+LGN EV+ V ++ E+LT + E +P
Sbjct: 354 LTGDDIREGLAAIVSVKVSEPQFEGQTKTKLGNTEVKSFVQKACNEHLTHWFEANPADAK 413
Query: 451 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 510
+I++K++S+ +A +AA++AR+LVR+KS LPGKLADC S P +SEI+IVEGDSAG
Sbjct: 414 TIVNKAVSSAQARVAARKARELVRRKSATDLGGLPGKLADCRSKDPSKSEIYIVEGDSAG 473
Query: 511 GSAKQGRDRRFQVIINPLQESIFAFASA 538
GSAK GRD +Q I+ PL+ I A
Sbjct: 474 GSAKSGRDSMYQAIL-PLRGKIINVEKA 500
>gi|313887747|ref|ZP_07821429.1| DNA gyrase, B subunit [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312846356|gb|EFR33735.1| DNA gyrase, B subunit [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 637
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/466 (49%), Positives = 323/466 (69%), Gaps = 14/466 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y + IQVLEGL+ VRKRP MYIGSTGPRGLHHLVYEI+DN++DEA AG +I + +
Sbjct: 6 RHYDASDIQVLEGLDPVRKRPGMYIGSTGPRGLHHLVYEIVDNSIDEALAGICDHIIIKI 65
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
+ SV + DNG GIP+D+HP T KS +ETVLT+LHAGGKF +S Y VSGGLHGVG+S
Sbjct: 66 NKNGSVEITDNGSGIPVDIHPQTGKSTVETVLTILHAGGKF--DNSAYKVSGGLHGVGVS 123
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS L TV R+G Y Q+++RG + V+ + D GT I F PD +F
Sbjct: 124 VVNALSNKLVATVKRNGKIYRQEFARG--IRKSDLEVIGETNTDETGTTIYFEPDDTIFE 181
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTD 313
T ++F +A R RE+AFLN + I E D NE F + GG++ +V+++N
Sbjct: 182 T-VEFSDEVLAKRFREMAFLNKGIKIEFIDERKD-----LNEVFHYEGGIKSFVEFINAK 235
Query: 314 KKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
KKP+HD + + ++ + +++A+Q+ +D+YS+ +L +AN+I T +GGTH+ G +++LTR
Sbjct: 236 KKPVHDEIIYIDEIREETAVEIAIQY-TDSYSEVVLSFANNINTEEGGTHLSGFRSALTR 294
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
TLN G+K+ +K+K+ +LSGE VREG++ +ISV++P+P+FEGQTK +LGN E R +VD
Sbjct: 295 TLNDYGRKNNIIKEKEENLSGEDVREGISAVISVKLPDPQFEGQTKGKLGNSETRGIVDS 354
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ E L +LE +P V IL K+LSA +A AA++ARDL R+K+ L S +LPGKLADC
Sbjct: 355 VLSEDLAVFLEENPRVGKQILDKALSARRAREAARKARDLTRKKNNLESMTLPGKLADCQ 414
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
+ P+ +EIF+VEG+SAGGSAK GRD +Q I+ PL+ I A
Sbjct: 415 NDDPKRNEIFLVEGNSAGGSAKDGRDSAYQAIL-PLRGKIMNVEKA 459
>gi|164510799|emb|CAK18881.1| topoisomerase II subunit B [Staphylococcus intermedius NCTC 11048]
Length = 640
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 240/466 (51%), Positives = 313/466 (67%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA NIEV
Sbjct: 7 SENYGASQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYADNIEVV 66
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 67 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 124
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS++LEV V RDG +HQ Y +G P L V D+ GT IRF D +F
Sbjct: 125 SVVNALSDTLEVYVHRDGRIHHQAYHKGVPAFDLK----QVGDTDQTGTVIRFKADGTIF 180
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
+++ T+ RIRELAFLN + I L E D E + + Y + GG++ YV+ +N +
Sbjct: 181 QETTVYNYETLQKRIRELAFLNKGIRITLTDE-RDEENVREDSYHYEGGIKSYVELINEN 239
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+PLH+ + + D I +++ALQ+ S ++ +L YAN+I T +GGTH +G K +LTR
Sbjct: 240 KEPLHEEPIYVHQTRDDIEVEIALQYNS-GFATNLLTYANNIHTYEGGTHEDGFKRALTR 298
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LN+ G +SK +K+ LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR++VD+
Sbjct: 299 VLNNYGAQSKLIKEDKDRLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQIVDR 358
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E +L HP V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 359 VFSELFERFLFEHPQVARIIVEKGIMASRARIAAKKAREVTRRKSALDISSLPGKLADCS 418
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEIF+VEGDSAGGS K GRD R Q I+ PL+ I A
Sbjct: 419 SKDPSESEIFLVEGDSAGGSTKSGRDSRTQAIL-PLRGKILNVEKA 463
>gi|225181142|ref|ZP_03734588.1| DNA gyrase, B subunit [Dethiobacter alkaliphilus AHT 1]
gi|225168111|gb|EEG76916.1| DNA gyrase, B subunit [Dethiobacter alkaliphilus AHT 1]
Length = 650
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 236/475 (49%), Positives = 329/475 (69%), Gaps = 16/475 (3%)
Query: 71 NPVSK-TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
NP++ Y IQVLEGLEAVR+RP MYIGSTG RGLHHLV+E++DN++DEA AG+ +
Sbjct: 8 NPLNNGHYDESHIQVLEGLEAVRRRPGMYIGSTGARGLHHLVFEVVDNSIDEALAGHCDD 67
Query: 130 IEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 189
I + + DN ++V+D+GRGIP+ + P T + A+E VLTVLHAGGKFGG GY VSGGLH
Sbjct: 68 IVITIEKDNIITVSDDGRGIPVGIQPQTGRPAVEVVLTVLHAGGKFGGE--GYKVSGGLH 125
Query: 190 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 249
GVG+SVVNALSE LEV V RDG + ++RG V LT + GT+IRF PD
Sbjct: 126 GVGVSVVNALSEWLEVEVHRDGKIHQMSFARGAIVKELTV----TGKTKKTGTQIRFKPD 181
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYF-FAGGLEE 305
+VF T ++F + T++ R+RELAFLN + I + R E +D + E F + GG++
Sbjct: 182 AEVFET-VEFSYETLSKRLRELAFLNKGIRITVADERTELTDETNEKVKETFKYDGGIKS 240
Query: 306 YVQWLNTDKKPLHDVVGF--RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
+V++LN +K+PLH + ++ D +++ALQ+ D Y+D +L +AN+I T +GGTH
Sbjct: 241 FVEFLNKNKEPLHKKAIYLEQEKEDCCQVEIALQY-HDGYNDLILSFANNIHTHEGGTHE 299
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
G K++LTR +N +K+ +K+ + ++SGE +REGLT +ISV++ P+FEGQTKT+LGN
Sbjct: 300 AGFKSALTRLINDYARKNNLLKENESNVSGEDIREGLTAVISVKLLEPQFEGQTKTKLGN 359
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
E+R +VD + E L YL +P + ++ KS+SA +A AA++AR+L R+KS L +S
Sbjct: 360 SEMRGIVDSFLYEELGAYLGENPQMAKRLVEKSVSAARAREAARKARELARRKSALEVTS 419
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKLADC+S P E+++VEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 420 LPGKLADCASRDPAMCELYLVEGDSAGGSAKQGRDRRFQAIL-PLRGKIINVEKA 473
>gi|237720397|ref|ZP_04550878.1| DNA gyrase subunit B [Bacteroides sp. 2_2_4]
gi|262405441|ref|ZP_06081991.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_22]
gi|294646223|ref|ZP_06723877.1| DNA gyrase, B subunit [Bacteroides ovatus SD CC 2a]
gi|298480563|ref|ZP_06998760.1| DNA gyrase, B subunit [Bacteroides sp. D22]
gi|336404477|ref|ZP_08585172.1| DNA gyrase, B subunit [Bacteroides sp. 1_1_30]
gi|345510630|ref|ZP_08790194.1| DNA gyrase, B subunit [Bacteroides sp. D1]
gi|423214870|ref|ZP_17201398.1| DNA gyrase, B subunit [Bacteroides xylanisolvens CL03T12C04]
gi|229442648|gb|EEO48439.1| DNA gyrase, B subunit [Bacteroides sp. D1]
gi|229450148|gb|EEO55939.1| DNA gyrase subunit B [Bacteroides sp. 2_2_4]
gi|262356316|gb|EEZ05406.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_22]
gi|292638441|gb|EFF56805.1| DNA gyrase, B subunit [Bacteroides ovatus SD CC 2a]
gi|295086258|emb|CBK67781.1| DNA gyrase subunit B [Bacteroides xylanisolvens XB1A]
gi|298273384|gb|EFI14948.1| DNA gyrase, B subunit [Bacteroides sp. D22]
gi|335942274|gb|EGN04121.1| DNA gyrase, B subunit [Bacteroides sp. 1_1_30]
gi|392692133|gb|EIY85371.1| DNA gyrase, B subunit [Bacteroides xylanisolvens CL03T12C04]
Length = 652
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/470 (48%), Positives = 316/470 (67%), Gaps = 12/470 (2%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
P + +Y ++ IQVLEGLEAVRKRPAMYIG +GLHHLVYEI+DN++DEA AGY +IE
Sbjct: 8 PNNGSYSADSIQVLEGLEAVRKRPAMYIGDISVKGLHHLVYEIVDNSIDEALAGYCDHIE 67
Query: 132 VALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 191
V + DNS++V DNGRGIP+D H KSALE +TVLHAGGKF S Y VSGGLHGV
Sbjct: 68 VTINEDNSITVQDNGRGIPVDYHEKEKKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGV 125
Query: 192 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 251
G+S VNALS + V+R+G Y Q+Y GKP+ + V V + D GTR +FWPD
Sbjct: 126 GMSCVNALSTHMTTQVFRNGKIYQQEYEIGKPLYS----VKEVGTADITGTRQQFWPDGT 181
Query: 252 VFTTAIQFDHNTIAGRIRELAFLNPKLTIAL--RKEDSDPEKNQYNEYFFAGGLEEYVQW 309
+FT + +D+ +A R+RELA+LN L I+L R+ ++ + +++ GL E+V++
Sbjct: 182 IFTETV-YDYKILASRLRELAYLNAGLRISLTDRRVVNEDGSFKSEQFYSEEGLREFVRF 240
Query: 310 LNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+ + ++ L +DV+ + GI I++A+ + + +S+ + Y N+I TI+GGTH+ G +
Sbjct: 241 IESSREHLINDVIYLNSEKQGIPIEVAIMYNT-GFSENVHSYVNNINTIEGGTHLAGFRR 299
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
+LTRTL + SK ++ + +SG+ REGLT +ISV+V P+FEGQTKT+LGN EV
Sbjct: 300 ALTRTLKKYAEDSKMLEKVKVEISGDDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVMG 359
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
VDQ+V E L YLE HP +I+ K + A A AA++AR++V++KS + LPGKL
Sbjct: 360 AVDQAVGEVLAYYLEEHPKEAKTIVDKVILAATARHAARKAREMVQRKSPMSGGGLPGKL 419
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
ADCS P + E+F+VEGDSAGG+AKQGR+R FQ I+ PL+ I A
Sbjct: 420 ADCSDKDPSKCELFLVEGDSAGGTAKQGRNRMFQAIL-PLRGKILNVEKA 468
>gi|23978217|dbj|BAC21107.1| DNA gyrase B subunit [Calothrix brevissima]
Length = 398
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/402 (57%), Positives = 302/402 (75%), Gaps = 9/402 (2%)
Query: 102 TGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSA 161
TGP+GLHHLVYE++DN++DEA AGY +++EV L AD SV+V D+GRGIP D+HP T KSA
Sbjct: 1 TGPKGLHHLVYEVVDNSIDEALAGYCTHVEVDLNADGSVTVTDDGRGIPTDIHPKTGKSA 60
Query: 162 LETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG 221
LETVLT+LHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD + Q+Y RG
Sbjct: 61 LETVLTILHAGGKFGGGGYKVSGG--LHGVGISVVNALSEFVEVTVWRDKKVHLQRYERG 118
Query: 222 KPVTTLTCHVLPVDSKD-RQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTI 280
PV+ L V P K+ R GT + F PD Q+FTT +FD+ T+AGR+RELA+LN + I
Sbjct: 119 IPVSDL--QVKPNKEKEARTGTSVTFLPDTQIFTTGTEFDYITLAGRLRELAYLNAGVKI 176
Query: 281 AL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLAL 336
R E + + Y + GG++EY+ ++N +K+PLH+ ++ + + + +++AL
Sbjct: 177 TFTDNRLELLKSDTPKIETYEYRGGIKEYIAYMNREKQPLHEEIIYVQGERSNVQVEVAL 236
Query: 337 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 396
QWC+DAY+D +LG+AN+IRT+DGGTH+EG+KA LTRTLN++ +K +K+ + +LSGEHV
Sbjct: 237 QWCTDAYTDNVLGFANNIRTVDGGTHLEGLKAVLTRTLNAIARKRNKIKENEPNLSGEHV 296
Query: 397 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 456
REGLT IISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE HP V D++L K+
Sbjct: 297 REGLTAIISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFHPSVADAVLDKA 356
Query: 457 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEE 498
+ A KAA AA+ AR+LVR+KSVL SS LPGKLADCS+ P E
Sbjct: 357 IQAFKAAEAARHARELVRRKSVLESSPLPGKLADCSTRDPSE 398
>gi|29348838|ref|NP_812341.1| DNA gyrase subunit B [Bacteroides thetaiotaomicron VPI-5482]
gi|298387912|ref|ZP_06997461.1| DNA gyrase, B subunit [Bacteroides sp. 1_1_14]
gi|383125011|ref|ZP_09945670.1| DNA gyrase, B subunit [Bacteroides sp. 1_1_6]
gi|29340744|gb|AAO78535.1| DNA gyrase subunit B [Bacteroides thetaiotaomicron VPI-5482]
gi|251840836|gb|EES68917.1| DNA gyrase, B subunit [Bacteroides sp. 1_1_6]
gi|298259319|gb|EFI02194.1| DNA gyrase, B subunit [Bacteroides sp. 1_1_14]
Length = 653
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/471 (48%), Positives = 318/471 (67%), Gaps = 13/471 (2%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
P + +Y ++ IQVLEGLEAVRKRPAMYIG +GLHHLVYEI+DN++DEA AGY +IE
Sbjct: 8 PNNGSYSADSIQVLEGLEAVRKRPAMYIGDISIKGLHHLVYEIVDNSIDEALAGYCDHIE 67
Query: 132 VALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 191
V + DNS++V DNGRGIP+D H KSALE +TVLHAGGKF S Y VSGGLHGV
Sbjct: 68 VTINEDNSITVQDNGRGIPVDYHEKEKKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGV 125
Query: 192 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 251
G+S VNALS + V+R+G Y Q+Y GKP+ + V V D GTR +FWPD
Sbjct: 126 GMSCVNALSTHMTTQVFRNGKIYQQEYEIGKPLYS----VKEVGVSDITGTRQQFWPDDT 181
Query: 252 VFTTAIQFDHNTIAGRIRELAFLNPKLTIAL--RKEDSDPEKNQYNEYFFAG-GLEEYVQ 308
+FT + +D+ +A R+RELA+LN L I+L R+ ++ + + +E F++ GL E+V+
Sbjct: 182 IFTETV-YDYKILASRLRELAYLNAGLRISLTDRRVVNEEDGSFKSEVFYSEEGLREFVR 240
Query: 309 WLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
++ + ++ L +DV+ + GI I++A+ + + +S+ + Y N+I TI+GGTH+ G +
Sbjct: 241 FIESSREHLINDVIYLNSEKQGIPIEIAIMYNT-GFSENVHSYVNNINTIEGGTHLAGFR 299
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
+LTRTL + SK ++ + +SG+ REGLT +ISV+V P+FEGQTKT+LGN EV
Sbjct: 300 RALTRTLKKYAEDSKMLEKVKVEISGDDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVM 359
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
VDQ+V E L YLE HP +I+ K + A A AA++AR++V++KS + LPGK
Sbjct: 360 GAVDQAVGEVLAYYLEEHPKEAKTIVDKVILAATARHAARKAREMVQRKSPMSGGGLPGK 419
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LADCS P + E+F+VEGDSAGG+AKQGR+R FQ I+ PL+ I A
Sbjct: 420 LADCSDKDPSKCELFLVEGDSAGGTAKQGRNRMFQAIL-PLRGKILNVEKA 469
>gi|325288206|ref|YP_004264387.1| DNA gyrase subunit B [Syntrophobotulus glycolicus DSM 8271]
gi|324963607|gb|ADY54386.1| DNA gyrase subunit B [Syntrophobotulus glycolicus DSM 8271]
Length = 645
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 238/474 (50%), Positives = 323/474 (68%), Gaps = 23/474 (4%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
N + Y + QI+VLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AG+ N+
Sbjct: 12 NSPAADYNAGQIEVLEGLEAVRKRPGMYIGSTTSRGLHHLVYEIVDNSIDEAMAGFCDNV 71
Query: 131 EVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 190
EV + DNS++V DNGRGIP+D+HP K A+E +T+LHAGGKF G + Y VSGGLHG
Sbjct: 72 EVTIHNDNSITVKDNGRGIPVDIHPKMKKPAVEVAMTILHAGGKFSGDA--YKVSGGLHG 129
Query: 191 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 250
VG+SVVNALSE L+V V +G+ Y Q+YSRGKP+ L K R GT+I F PD
Sbjct: 130 VGMSVVNALSEWLKVEVKINGIRYQQEYSRGKPLYDLKE---AGTYKGRTGTQISFKPDA 186
Query: 251 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQW 309
Q+F I +D+ + R++EL+FLN + IAL+ E + E F +GG+ +YV++
Sbjct: 187 QIFEDVI-YDYEVLEQRLKELSFLNKNIGIALKDERTGA-----GELFKHSGGIVDYVKY 240
Query: 310 LNTDK-----KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 364
LN +K KP++ F + +++A Q+ +D YS+ + YAN+I T +GGTH
Sbjct: 241 LNRNKDAIQPKPIY----FEAQKEENIVEIAFQY-NDGYSENIYSYANNINTTEGGTHEA 295
Query: 365 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 424
G KA+LTR +N +K+ +K + +LSGE VREGLT IISV+V P+FEGQTKT+LGN
Sbjct: 296 GFKAALTRVINDYARKNNILKANENNLSGEDVREGLTAIISVKVREPQFEGQTKTKLGNS 355
Query: 425 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 484
E+R +VD + + L+ + E +P V I+ K L A +A +AA++ARDL R+K+ L S+SL
Sbjct: 356 EMRSIVDSILGDGLSTFCEENPSVAKKIVEKGLQATRARMAARKARDLTRRKNALDSTSL 415
Query: 485 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PGKLADC+ + EI++VEGDSAGGSAKQGRD++FQ I+ PL+ I A
Sbjct: 416 PGKLADCAWKEAQFCEIYLVEGDSAGGSAKQGRDQKFQAIL-PLRGKILNVEKA 468
>gi|448410257|ref|ZP_21575122.1| DNA gyrase subunit B [Halosimplex carlsbadense 2-9-1]
gi|445671953|gb|ELZ24532.1| DNA gyrase subunit B [Halosimplex carlsbadense 2-9-1]
Length = 638
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/460 (50%), Positives = 324/460 (70%), Gaps = 11/460 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ YG++QIQ LEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY +I V +
Sbjct: 6 EEYGAQQIQALEGLEAVRKRPAMYIGSTDDRGLHHLVYEVVDNSIDEALAGYCDSISVTI 65
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
D SVSV+D+GRGIP+D H +K A+E V+T+LHAGGKF S Y VSGGLHGVG+S
Sbjct: 66 HDDGSVSVSDDGRGIPVDTHEKYDKPAVEVVMTILHAGGKFDNKS--YQVSGGLHGVGVS 123
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALSE L+V V RDG Y + + +G P L V +D+ + GT IRFWPD ++F
Sbjct: 124 VVNALSERLDVEVKRDGAVYRESFEQGAPQDGLE-RVRDMDADEGTGTTIRFWPDTEIFE 182
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
A ++D++T+ R+RELAFLN + I L +D + + + GG+ E+V++LN K
Sbjct: 183 -ADEYDYSTLESRLRELAFLNSGVEITL----TDERDGTADTFRYEGGIREFVEYLNETK 237
Query: 315 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+PLH +VV F + I +++ALQ ++ ++ +AN+I T +GGTH+ G K +LTR
Sbjct: 238 EPLHQEVVYFEDEDQDIHVEVALQ-ATNELQGSIHAFANNINTREGGTHLTGFKTALTRI 296
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N +++ + + D +L G+ +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ +
Sbjct: 297 VNDYAEENSLLGEIDGTLKGDDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESA 356
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
V + L Y E HPD + I+ K++ A KA AAK+A++L R+KS L S++LPGKL+DC +
Sbjct: 357 VHDGLGTYFEEHPDTAEVIVQKAVEAAKARKAAKKAKELTRRKSALDSTALPGKLSDCQT 416
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
PE++E+FI EGDSAGGSAKQGR+ FQ I+ P++ I
Sbjct: 417 RDPEDAELFITEGDSAGGSAKQGRNPEFQAIL-PIRGKIL 455
>gi|83588881|ref|YP_428890.1| DNA gyrase subunit B [Moorella thermoacetica ATCC 39073]
gi|83571795|gb|ABC18347.1| DNA gyrase, B subunit [Moorella thermoacetica ATCC 39073]
Length = 634
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/473 (49%), Positives = 323/473 (68%), Gaps = 22/473 (4%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
+ V Y + QIQ+LEGLEAVR+RP MYIG+TG RGLH LV+E++DN++DEA AG+ I
Sbjct: 2 DQVRNEYDASQIQILEGLEAVRRRPGMYIGNTGVRGLHQLVFELVDNSIDEALAGFCDRI 61
Query: 131 EVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 190
EV + + S++VADNGRGIP+D+H T A+E LT+LHAGGKFGG+ GY V+GGLHG
Sbjct: 62 EVTIHENGSLTVADNGRGIPVDIHEKTGLPAVEVALTILHAGGKFGGN--GYKVAGGLHG 119
Query: 191 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 250
VGLSVVNALSE LE+ V R+G YHQ+Y RG+ V+ L + GT + F+PD
Sbjct: 120 VGLSVVNALSEWLEIKVKRNGKIYHQEYRRGQKVSELKV----IGKTKGTGTSVTFYPDG 175
Query: 251 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWL 310
++F + F I R++EL+FLN + I R E ++ E Y+ GGL ++V+ L
Sbjct: 176 EIFEDLV-FQDEIIGRRLQELSFLNRGVKIVFRDERNESETT----YYHTGGLIDFVRHL 230
Query: 311 NTDK-----KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 365
N +K KPL+ F + D + ++A+Q+ +D Y++ +L YAN+I T++GG+H G
Sbjct: 231 NKNKTVLFNKPLY----FSGEKDDVQAEIAIQY-NDGYNELILSYANNIHTVEGGSHEIG 285
Query: 366 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 425
K +LTR +N ++ +KD + +LSGE +REGLT +ISV+V P+FEGQTKT+LGN E
Sbjct: 286 FKTALTRVINDYARRFNLLKDAEANLSGEDIREGLTAVISVKVLEPQFEGQTKTKLGNTE 345
Query: 426 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 485
VR +VD V E L+ YLE +P + I+ K+L+A +A AA++AR+L R+K+ L +SLP
Sbjct: 346 VRGIVDSLVAENLSAYLEENPTIGRRIVDKALNAFRAREAARKARELTRRKNALEITSLP 405
Query: 486 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
GKLADC+ P +E+F+VEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 406 GKLADCTHKDPAMAELFLVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNVEKA 457
>gi|375255406|ref|YP_005014573.1| DNA gyrase subunit B [Tannerella forsythia ATCC 43037]
gi|363408013|gb|AEW21699.1| DNA gyrase, B subunit [Tannerella forsythia ATCC 43037]
Length = 652
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 228/468 (48%), Positives = 309/468 (66%), Gaps = 12/468 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
SK Y S+ IQVLEGLEAVRKRPAMYIG TG +GLHHLVYE++DN++DEA AG+ NIEV
Sbjct: 10 SKEYSSKNIQVLEGLEAVRKRPAMYIGDTGEKGLHHLVYEVVDNSIDEALAGFCKNIEVV 69
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS+ V D+GRGIP+D H KSALE VLTVLHAGGKF + Y VSGGLHGVG+
Sbjct: 70 INEDNSICVTDDGRGIPVDYHEKEGKSALEVVLTVLHAGGKFDKGT--YKVSGGLHGVGV 127
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
S VNALS L+ + R+G Y Q++S+GKP+ + + DR GT I F PD VF
Sbjct: 128 SCVNALSSHLKAEIHRNGKIYIQEFSQGKPLGD----IRETGTIDRTGTIISFKPDDTVF 183
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLN 311
T Q+ ++ +A R+RELAFLN + + L + E + F GL+E+V++++
Sbjct: 184 TVT-QYKYDILANRLRELAFLNAGIYLTLTDKREKKEDGSFKSEVFHSNEGLKEFVRYID 242
Query: 312 TDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 370
K+ + HDV+ + GI +++A+ + + +Y++++ Y N I TI+GGTH+ G + L
Sbjct: 243 KSKESMIHDVIHIVTEKQGIPVEVAMTYNT-SYNESVFSYVNDINTIEGGTHLSGFRRGL 301
Query: 371 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
TRTL + SK ++ + + G+ REGLT +IS++V P+FEGQTKT+LGN EV V
Sbjct: 302 TRTLKKYAEDSKLLEKAKVEIQGDDFREGLTAVISIKVAEPQFEGQTKTKLGNNEVMGAV 361
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
D +V E L YLE HP +I+ K + A A AA++AR++V++KS LPGKLAD
Sbjct: 362 DMAVGEALGYYLEEHPKEAKAIVDKVILAATARQAARKAREMVQRKSPFSGGGLPGKLAD 421
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
CSS E E+F+VEGDSAGG+AKQGRDR FQ I+ PL+ I A
Sbjct: 422 CSSKDAAECELFLVEGDSAGGTAKQGRDRNFQAIL-PLRGKILNVEKA 468
>gi|116511733|ref|YP_808949.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris SK11]
gi|125624430|ref|YP_001032913.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris MG1363]
gi|389854795|ref|YP_006357039.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris NZ9000]
gi|116107387|gb|ABJ72527.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris SK11]
gi|124493238|emb|CAL98205.1| topoisomerase IV subunit B [Lactococcus lactis subsp. cremoris
MG1363]
gi|300071217|gb|ADJ60617.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris NZ9000]
Length = 651
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 232/467 (49%), Positives = 328/467 (70%), Gaps = 10/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA AG+AS+IEV
Sbjct: 11 LADEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALAGFASHIEV 70
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V D+GRGIP+D+ T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 71 FIEPDNSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVG 128
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
SVVNALS +L+VTV +DG +Y Q+Y RG L + D +GT + F PD ++
Sbjct: 129 SSVVNALSTTLDVTVHKDGQKYFQEYHRGLVRDDLKI----IGETDLRGTTVHFVPDPEI 184
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FT ++FD + +A R+RELAFLN L I+L + EKN+ + + + GG++ YV++LN
Sbjct: 185 FTETVEFDFDKLATRVRELAFLNRGLRISLTDKREGNEKNEVH-FHYEGGIQSYVEYLNE 243
Query: 313 DKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K + + F + ++DGI +++A+Q+ +D Y ++ +AN+I T +GGTH +G + +LT
Sbjct: 244 NKTVIFEPAIFTEGEMDGIAVEVAMQY-TDTYHSVVMSFANNINTHEGGTHEQGFRTALT 302
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R +N+ K++K +K+ + +L+G+ VREGLT +ISV+ PNP+FEGQTKT+LGN EV +V+
Sbjct: 303 RVINNYAKQNKILKENEDNLTGDDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVTGIVN 362
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+ E LT ++ +P V I+ K + A KA +AAKRAR++ R+KS L S+LPGKLADC
Sbjct: 363 KLFAEALTTFMLENPQVARKIVEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLADC 422
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SS PE++E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 423 SSNNPEQTELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 468
>gi|23978214|dbj|BAC21106.1| DNA gyrase B subunit [Oscillatoria agardhii]
Length = 396
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/401 (58%), Positives = 299/401 (74%), Gaps = 9/401 (2%)
Query: 102 TGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSA 161
TGPRGLHHLVYE++DNA+DEA AGY ++IE+ A+ SV+V D+GRGIP+D H T KSA
Sbjct: 1 TGPRGLHHLVYEVVDNAIDEALAGYCTHIEIDFNANGSVTVTDDGRGIPVDTHSKTGKSA 60
Query: 162 LETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG 221
LETVLTVLHAGGKFGG S LHGVG+SVVNALSE LEVTV+RD EY Q++ RG
Sbjct: 61 LETVLTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEWLEVTVFRDRKEYSQRFERG 118
Query: 222 KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIA 281
P T LT P+ + R GT + F PD +FTT I+FD +TIA R+RELA+LN + I
Sbjct: 119 TPATELTSK--PI-KEARTGTSVSFLPDTSIFTTGIEFDCDTIASRLRELAYLNAGVKIT 175
Query: 282 L---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQ 337
L R E + E + Y + GG+ EY+ ++N DK+PLH D++ + + I++ALQ
Sbjct: 176 LTDSRLELLNRENPRIETYCYEGGIREYIAYMNNDKQPLHEDIIYTCGERSNVQIEVALQ 235
Query: 338 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 397
WC+DAYSDT+LG+AN+IRTIDGGTH+EG+K LTRTLN++ +K +K+ + +L GE++R
Sbjct: 236 WCTDAYSDTVLGFANNIRTIDGGTHLEGLKTVLTRTLNAIARKRNKLKEGEANLGGENIR 295
Query: 398 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 457
EGLT +IS +VP+PEFEGQTKTRLGNPEVR +VD V E LTEYLE +P + D+I+ K++
Sbjct: 296 EGLTAVISAKVPDPEFEGQTKTRLGNPEVRGIVDSLVGEALTEYLEFNPGIADAIIEKAI 355
Query: 458 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEE 498
A KAA AA+RARDLVR+KSVL SS LPGKLADCS+ P E
Sbjct: 356 QAFKAAEAARRARDLVRRKSVLESSPLPGKLADCSTRDPHE 396
>gi|420202666|ref|ZP_14708256.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM018]
gi|394269207|gb|EJE13745.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM018]
Length = 643
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 242/466 (51%), Positives = 314/466 (67%), Gaps = 11/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYAS+IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYASHIEVV 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V R+G YHQ Y +G P L + D+ GT IRF DK++F
Sbjct: 129 SVVNALSQDLEVYVHRNGTIYHQAYKQGVPQFDLK----EIGDTDKTGTAIRFKADKEIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +++ T+ RIRELAFLN + I L+ E + + Y + GG++ YV LN +
Sbjct: 185 TETTVYNYETLQKRIRELAFLNKGIQITLKDEREEEVRED--SYHYEGGIKSYVDLLNEN 242
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+PLH+ + + D I +++ALQ+ S Y +L YAN+I T +GGTH +G K +LTR
Sbjct: 243 KEPLHEEPIYIHQSKDDIEVEIALQYNS-GYGTNLLTYANNIHTYEGGTHEDGFKRALTR 301
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G +SK +K+ LSGE REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 302 VLNSYGTQSKIIKEDKDRLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDR 361
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 362 LFSEHFERFLYENPSVGRIIVEKGIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCS 421
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PEESEIF+VEGDSAGGS K GRD R Q I+ PL+ I A
Sbjct: 422 SKNPEESEIFLVEGDSAGGSTKSGRDSRTQAIL-PLRGKILNVEKA 466
>gi|402847272|ref|ZP_10895569.1| DNA gyrase, B subunit [Porphyromonas sp. oral taxon 279 str. F0450]
gi|402266748|gb|EJU16165.1| DNA gyrase, B subunit [Porphyromonas sp. oral taxon 279 str. F0450]
Length = 655
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/480 (48%), Positives = 315/480 (65%), Gaps = 13/480 (2%)
Query: 63 IATEAFKENPVS-KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDE 121
++ E F ++ + K Y + IQVLEGLEAVRKRPAMYIG G +GLHHLVYE++DN++DE
Sbjct: 1 MSEELFDQDHTNEKEYSASSIQVLEGLEAVRKRPAMYIGDIGEKGLHHLVYEVVDNSIDE 60
Query: 122 AQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSG 181
A AGY ++I+V + DNS+ V DNGRGIP+D+H KSALE VLTVLHAGGKF S
Sbjct: 61 ALAGYCNDIKVTIHEDNSIEVQDNGRGIPVDIHEKEGKSALEVVLTVLHAGGKFDKGS-- 118
Query: 182 YSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQG 241
Y VSGGLHGVG+S VNALS L+ TV RDG Y Q++SRG P T L + + D+ G
Sbjct: 119 YKVSGGLHGVGVSCVNALSTLLKATVQRDGKIYTQEFSRGVPTTELQT----IGTTDKTG 174
Query: 242 TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKN--QYNEYFF 299
T + F PD +FT+ ++ +A R+RELAFLN +T+ L E E Y+
Sbjct: 175 TTVLFKPDDTIFTST-EYQFKILATRLRELAFLNAGITLTLTDERQRDEAGVALTETYYS 233
Query: 300 AGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTID 358
GLEE+V++++ K+ L DV+ + GI +++A+ + + +Y++ + Y N+I TI+
Sbjct: 234 EKGLEEFVKYIDRSKEHLIEDVIHIITEKQGIPVEVAMTYNT-SYNENVYSYVNNINTIE 292
Query: 359 GGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTK 418
GGTH+ G + LTRTL SK + + ++G+ REGLT ++S++V P+FEGQTK
Sbjct: 293 GGTHLAGFRRGLTRTLKKYATDSKLLDKVKVEITGDDFREGLTAVVSIKVAEPQFEGQTK 352
Query: 419 TRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSV 478
T+LGN EV VD +V E L YLE HP I+ K + A A AA++AR++V++KS
Sbjct: 353 TKLGNNEVMGAVDVAVSEALEIYLEEHPKEAKIIVDKVILAATARQAARKAREMVQRKSP 412
Query: 479 LRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
L LPGKLADCSS P SE+F+VEGDSAGG+AKQGRDR FQ I+ PL+ I A
Sbjct: 413 LSGGGLPGKLADCSSKDPILSELFLVEGDSAGGTAKQGRDREFQAIL-PLRGKILNVEKA 471
>gi|317126747|ref|YP_004093029.1| DNA gyrase subunit beta [Bacillus cellulosilyticus DSM 2522]
gi|315471695|gb|ADU28298.1| DNA gyrase, B subunit [Bacillus cellulosilyticus DSM 2522]
Length = 640
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/460 (50%), Positives = 315/460 (68%), Gaps = 12/460 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
++Y QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGY I V +
Sbjct: 9 QSYDESQIQVLEGLEAVRKRPGMYIGSTSGRGLHHLVWEIVDNSIDEAMAGYCDTITVTI 68
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DNS++V DNGRGIP+ +H + A+E ++TVLHAGGKFGG S LHGVG S
Sbjct: 69 EEDNSITVEDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGAS 126
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS LEV V DG ++Q + RG P L + D+ GT I+F PD ++FT
Sbjct: 127 VVNALSTKLEVEVHLDGKVHYQMFERGVPSADLKV----IGETDKTGTIIKFKPDNEIFT 182
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
++D++T+A R+RELAFLN L I + + +D +K EYF+ GG+ +V+ LN K
Sbjct: 183 ETTEYDYDTLANRLRELAFLNRGLRILISDKRNDGKKA---EYFYEGGISSFVEHLNRTK 239
Query: 315 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+P+H+ V + DGI++++A+Q+ +D+++ + +AN+I T +GGTH G K +LTR
Sbjct: 240 EPIHEPPVFIESEKDGISVEIAMQY-NDSFASNLYSFANNINTHEGGTHESGFKTALTRV 298
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N +K+ K+ D +L G+ VREGLT IISV++P+P+FEGQTKT+LGN E R + D
Sbjct: 299 INDYARKNSLFKETDPNLIGDDVREGLTAIISVKIPDPQFEGQTKTKLGNSEARTITDSL 358
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
E++ +Y+ +P+V I+ K + A +A AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 359 FSEHMAKYMAENPNVARKIVEKGIMASRARDAAKKARELTRRKSALEVSSLPGKLADCSS 418
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I
Sbjct: 419 KDATISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKIL 457
>gi|31071473|dbj|BAC76785.1| DNA gyrase B subunit [Tolypothrix sp. IAM M-259]
Length = 396
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/401 (57%), Positives = 298/401 (74%), Gaps = 9/401 (2%)
Query: 102 TGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSA 161
TGPRGLHHLVYE++DN++DEA AGY +++EV + AD SV+V D+GRGIP DLHP T KSA
Sbjct: 1 TGPRGLHHLVYEVVDNSIDEALAGYCTHVEVDINADGSVTVTDDGRGIPTDLHPKTGKSA 60
Query: 162 LETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG 221
LETVLTVLH GGKFGG S LHGVG+SVVNALSE +EVTVWRD + Q+Y RG
Sbjct: 61 LETVLTVLHTGGKFGGGGYKVSGG--LHGVGISVVNALSEVVEVTVWRDKKVHIQRYERG 118
Query: 222 KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIA 281
P T L + R GT + F PD Q+FTT I+FD+ T+AGR+RELA+LN + I
Sbjct: 119 IPATELQTKPY---KEARTGTSVTFKPDTQIFTTGIEFDYITLAGRLRELAYLNAGVKIT 175
Query: 282 L---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQ 337
R E + + Y + GG++EYV ++N +K+PLH+ ++ + + + +++ALQ
Sbjct: 176 FTDNRLELLKSDTPKVETYEYKGGIKEYVTYMNREKQPLHEEIIYVQGERSNVQVEVALQ 235
Query: 338 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 397
WC+DAY+D +LG+AN+IRT+DGGTH+EG+KA LTRTLN++ +K +K+ + +LSGEHVR
Sbjct: 236 WCTDAYTDNVLGFANNIRTVDGGTHLEGLKAVLTRTLNAIARKRNKIKENEANLSGEHVR 295
Query: 398 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 457
EGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE HP + DS+L K++
Sbjct: 296 EGLTAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFHPGIADSVLDKAI 355
Query: 458 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEE 498
A KAA AA+ AR+LVR+KSVL SS LPGKLADCSS P E
Sbjct: 356 QAFKAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPGE 396
>gi|314934956|ref|ZP_07842315.1| DNA gyrase, B subunit [Staphylococcus caprae C87]
gi|313652886|gb|EFS16649.1| DNA gyrase, B subunit [Staphylococcus caprae C87]
Length = 644
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 247/466 (53%), Positives = 317/466 (68%), Gaps = 11/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 12 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 71
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 72 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 129
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V+R+ YHQ Y +G P L + D+ GT IRF D ++F
Sbjct: 130 SVVNALSQDLEVYVYRNDTIYHQAYKKGVPQFDLK----EIGETDQTGTAIRFKADGEIF 185
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +++ T+ RIRELAFLN + I LR E + + Y + GG++ YV+ LN +
Sbjct: 186 TETTVYNYETLQQRIRELAFLNKGIQITLRDEREEEGRED--SYHYEGGIKSYVELLNEN 243
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+PLH+ + + D I +++ALQ+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPLHEEPIYIHQTKDDIEVEIALQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 302
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G +SK +K+ LSGE REGLT IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 303 ILNSYGIQSKIIKEDKDKLSGEDTREGLTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 362
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
EY +L HP V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 363 LFAEYFERFLFEHPAVGRIIVEKGIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCS 422
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PEESEIF+VEGDSAGGS K GRD R Q I+ PL+ I A
Sbjct: 423 SKNPEESEIFLVEGDSAGGSTKSGRDSRTQAIL-PLRGKILNVEKA 467
>gi|392956558|ref|ZP_10322085.1| DNA gyrase subunit B [Bacillus macauensis ZFHKF-1]
gi|391877540|gb|EIT86133.1| DNA gyrase subunit B [Bacillus macauensis ZFHKF-1]
Length = 640
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 228/470 (48%), Positives = 319/470 (67%), Gaps = 12/470 (2%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
+ V + Y IQVLEGLEAVRKRP MYIG+T +GLHHLV+EI+DN++DEA AGY
Sbjct: 4 DQQVEQHYDESDIQVLEGLEAVRKRPGMYIGATNVKGLHHLVWEIVDNSIDEALAGYCDE 63
Query: 130 IEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 189
I V + DNS++V DNGRGIP+ +H + A+E ++TVLHAGGKFGG S LH
Sbjct: 64 ITVTVEKDNSITVTDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LH 121
Query: 190 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 249
GVG SVVNALS ++VTV+RDG +HQKY RG PV+ L + +GT+I F PD
Sbjct: 122 GVGASVVNALSSEMDVTVYRDGHIHHQKYHRGVPVSDLEV----IGETTERGTKIHFVPD 177
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTI-ALRKEDSDPEKNQYNEYFFAGGLEEYVQ 308
++FT ++D T++ RIRELA+LN + I A+ + + +P K E+ + GG++ YV+
Sbjct: 178 TEIFTETTEYDFATLSQRIRELAYLNRGIKICAVDQREENPTKQ---EFHYEGGIKSYVE 234
Query: 309 WLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+N ++ LH+ + + +GI++++ALQ+ +D+Y+ + +AN+I T +GGTH G K
Sbjct: 235 HINRSREVLHEPIFIEGEKEGISLEIALQY-NDSYTSNIYSFANNISTHEGGTHESGFKT 293
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
+LTR +N G+K+ K D +L+G+ VREGLT IIS++ P+P+FEGQTKT+LGN E R
Sbjct: 294 ALTRVINDYGRKNNYFKGSDTNLTGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEART 353
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+ + E+ + ++ +PDV +L K + AL+A +AAK+AR+ R+KS L SSLPGKL
Sbjct: 354 ITESLFSEHFSSFMLENPDVAKRVLEKGMMALRARVAAKKAREFTRRKSALEVSSLPGKL 413
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
ADCSS SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 414 ADCSSKDASVSELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKIINVEKA 462
>gi|448391972|ref|ZP_21567067.1| DNA gyrase subunit B [Haloterrigena salina JCM 13891]
gi|445665384|gb|ELZ18062.1| DNA gyrase subunit B [Haloterrigena salina JCM 13891]
Length = 644
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/461 (50%), Positives = 318/461 (68%), Gaps = 10/461 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +I V++
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVSIND 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSVAD+GRGIP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVADDGRGIPVDTHDEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LE V RDG + + G+PV + V ++ + GT+IRFWPD +F
Sbjct: 125 NALSERLEAEVKRDGSVFRHAFEEGEPVGDME-RVRDMEEDEETGTQIRFWPDTGIFE-G 182
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
+F +T++ R+RELAFLN + I L R E D + Y + GG+ E+V++LN
Sbjct: 183 DEFSFSTLSNRLRELAFLNSGVRITLSDERTELHDEDAPVEETYEYQGGIREFVEYLNET 242
Query: 314 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
+ +HD V+ F + I +++A+Q ++ ++ +AN+I T +GGTH+ G K +LTR
Sbjct: 243 RSAMHDDVIYFEAEEQNIQVEVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTR 301
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
T+N K + + D + +L GE +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 302 TVNDYAKDNDMLGDLEDNLKGEDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVES 361
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
S+ E L Y E HPD +I++K++ A KA AA++A +L R+KS L S+SLPGKLADC
Sbjct: 362 SMHEGLGTYFEEHPDTAQAIVTKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQ 421
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
+ P+E+E+FI EGDSAGGSAKQ R+ FQ I+ P++ I
Sbjct: 422 TKDPDEAELFIAEGDSAGGSAKQARNPDFQAIL-PIKGKIL 461
>gi|385838590|ref|YP_005876220.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris A76]
gi|358749818|gb|AEU40797.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris A76]
Length = 651
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 232/467 (49%), Positives = 328/467 (70%), Gaps = 10/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA AG+AS+IEV
Sbjct: 11 LADEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALAGFASHIEV 70
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V D+GRGIP+D+ T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 71 FIEPDNSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVG 128
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
SVVNALS +L+VTV +DG +Y Q+Y RG L + D +GT + F PD ++
Sbjct: 129 SSVVNALSTTLDVTVHKDGQKYFQEYHRGLVRDDLKI----IGETDLRGTTVHFVPDPEI 184
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FT ++FD + +A R+RELAFLN L I+L + EKN+ + + + GG++ YV++LN
Sbjct: 185 FTETVEFDFDKLATRVRELAFLNRGLRISLTDKREGNEKNEVH-FHYEGGIQSYVEYLNE 243
Query: 313 DKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K + + F + ++DGI +++A+Q+ +D Y ++ +AN+I T +GGTH +G + +LT
Sbjct: 244 NKTVIFEPAIFTEGEMDGIAVEVAMQY-TDTYHSVVMSFANNINTHEGGTHEQGFRTALT 302
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R +N+ K++K +K+ + +L+G+ VREGLT +ISV+ PNP+FEGQTKT+LGN EV +V+
Sbjct: 303 RVINNYAKQNKILKENEDNLTGDDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVTGIVN 362
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+ E LT ++ +P V I+ K + A KA +AAKRAR++ R+KS L S+LPGKLADC
Sbjct: 363 KLFAEALTTFMLENPKVARKIVEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLADC 422
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SS PE++E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 423 SSNNPEQTELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 468
>gi|325269651|ref|ZP_08136264.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella
multiformis DSM 16608]
gi|324988019|gb|EGC19989.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella
multiformis DSM 16608]
Length = 657
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/465 (49%), Positives = 315/465 (67%), Gaps = 16/465 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY NIEV++
Sbjct: 10 NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCKNIEVSIN 69
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNSV+V D+GRGIP+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 70 EDNSVTVEDDGRGIPVDEHKKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 127
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS ++ V+RDG Y Q+Y +GKP+ + V D+ GTR +FWPD +FTT
Sbjct: 128 VNALSSHMKSQVFRDGKIYQQEYEKGKPLYPVKV----VGETDKTGTRQQFWPDAGIFTT 183
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY-NEYFFA-GGLEEYVQWLNTD 313
+ F + +A R+RELA+LN + I L DPE + E F A GL+E+V++++
Sbjct: 184 TV-FQWDIVARRMRELAYLNAGIKITLSDLRPDPETGKTRTEVFHAKDGLKEFVRYVDRH 242
Query: 314 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
++ L DV+ + + I I++A+ + +D Y++ + Y N+I TI+GGTH++G + +LTR
Sbjct: 243 RQHLFDDVIYLKTEKQNIPIEVAVMYNTD-YTENIHSYVNNINTIEGGTHLQGFRTALTR 301
Query: 373 TLNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
TL + SK ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 302 TLKAYADNDPQISKQIEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSG 361
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
V Q+V E L+ YLE HP+ I +K + A A +AA++AR+ V++K+V+ LPGKL
Sbjct: 362 AVQQAVGEALSNYLEEHPNEAKLICNKVILAATARVAARKARESVQRKNVMSGGGLPGKL 421
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCS+ P++ EIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 422 ADCSNKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAIL-PLRGKIL 465
>gi|448340252|ref|ZP_21529225.1| DNA gyrase subunit B [Natrinema gari JCM 14663]
gi|445630558|gb|ELY83819.1| DNA gyrase subunit B [Natrinema gari JCM 14663]
Length = 642
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/460 (50%), Positives = 320/460 (69%), Gaps = 10/460 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +I V++
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVSIHE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSVAD+GRGIP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVADDGRGIPVDTHEEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LE V RDG+ + + G+PV + V ++ D GT IRFWPD +F T
Sbjct: 125 NALSERLEAEVKRDGV-FRHAFEAGEPVGDME-RVRDMEPDDETGTEIRFWPDTDIFETG 182
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALR--KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
+ +T++ R+RELAFLN + I LR +E++D Y + GG+ E+V +LN +
Sbjct: 183 -EISFSTLSNRLRELAFLNSGVRITLRDEREETDAGDPVTETYEYDGGIREFVNYLNETR 241
Query: 315 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+HD V+ F + I +++A+Q ++ ++ +AN+I T +GGTH+ G K +LTR
Sbjct: 242 SAMHDDVIYFEDEAQNIQVEVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTRC 300
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N ++ + D D +L GE +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ +
Sbjct: 301 VNDYANENDLLSDLDDNLKGEDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESA 360
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
+ E L Y E HPD ++I++K++ A KA +AA++A +L R+KS L S+SLPGKLADC +
Sbjct: 361 MHEGLGTYFEEHPDTAEAIVAKAVEAAKARMAAQKAEELTRRKSALESTSLPGKLADCQT 420
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P+E+E+FI EGDSAGGSAKQ R+ FQ I+ P++ I
Sbjct: 421 KDPDEAELFIAEGDSAGGSAKQARNPDFQAIL-PIKGKIL 459
>gi|15606321|ref|NP_213700.1| gyrase B [Aquifex aeolicus VF5]
gi|4033398|sp|O67137.1|GYRB_AQUAE RecName: Full=DNA gyrase subunit B
gi|2983522|gb|AAC07098.1| gyrase B [Aquifex aeolicus VF5]
Length = 792
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 228/472 (48%), Positives = 318/472 (67%), Gaps = 16/472 (3%)
Query: 69 KENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
+++ + Y +E I+ + GLE VR RPAMYIG G RGLHHL++EILDNAVDEA AGYA
Sbjct: 4 RQSQTPQEYTAEAIKAVSGLEHVRLRPAMYIGDIGERGLHHLIWEILDNAVDEAVAGYAR 63
Query: 129 NIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 188
NI V + DNSV+V D+GRGIP+D+HP T K A+E V T+L AGGKF Y+ SGGL
Sbjct: 64 NISVTIHRDNSVTVEDDGRGIPVDIHPETGKPAVEMVFTMLGAGGKF--EKKVYTYSGGL 121
Query: 189 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 248
HGVG SVVNALSE L V V+RDG Y + RG+ V L HV V ++GT++ F P
Sbjct: 122 HGVGASVVNALSEWLIVEVYRDGKIYRMAFKRGEVVEPL--HV--VGETKKRGTKVSFKP 177
Query: 249 DKQVF-TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 307
D ++F TT I+FD + R+RELA+LNP++ L +D ++ Y F G+EE V
Sbjct: 178 DPEIFETTEIKFD--IVEKRVRELAYLNPEVKFEL----TDERLGKHLIYKFDRGIEELV 231
Query: 308 QWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 366
++LN K+PL D++ + + +G+ +D+A Q+ D Y + + + N+I+T++GGTH+ G
Sbjct: 232 KYLNEGKEPLFKDIIRIQGEKEGVIVDIAFQYVKD-YKERIESFVNNIKTVEGGTHVTGF 290
Query: 367 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 426
++ L++ + + + K K+ S +GE VREGLT +++ +VPNP+FEGQTKT+LGN V
Sbjct: 291 RSGLSKAVIRMAQGLKLAKELKKSFTGEDVREGLTAVVACKVPNPQFEGQTKTKLGNQNV 350
Query: 427 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 486
+++V+ ++LT Y E DVL +I+ K++ A A AAK+A++LVR+KS L LPG
Sbjct: 351 KQIVESITYDFLTSYFEKKRDVLKAIVEKAIEAALAREAAKKAKELVRRKSPLEEGVLPG 410
Query: 487 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
KLADCS T P + EIF+VEGDSAGGSAKQ RDRR+Q I+ PL+ I A
Sbjct: 411 KLADCSETDPSKCEIFLVEGDSAGGSAKQARDRRYQAIL-PLRGKIINVEKA 461
>gi|251794042|ref|YP_003008773.1| DNA gyrase subunit beta [Paenibacillus sp. JDR-2]
gi|247541668|gb|ACS98686.1| DNA gyrase, B subunit [Paenibacillus sp. JDR-2]
Length = 635
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 238/464 (51%), Positives = 313/464 (67%), Gaps = 13/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
TY QIQVLEGLEAVRKRP MYIGST +GLHHLV+E++DN++DEA AGY + I+V +
Sbjct: 6 TYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEVVDNSIDEALAGYCTKIQVRVH 65
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+ + KS LE V+TVLHAGGKFGG GY VSGGLHGVG+SV
Sbjct: 66 EDNSITVIDNGRGIPVGENAKLKKSTLEVVMTVLHAGGKFGGE--GYKVSGGLHGVGVSV 123
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALSE + VTV G Y Q+Y RG P V + D GT ++F PD ++FT
Sbjct: 124 VNALSEHVTVTVKLHGNVYQQEYRRGVP----QYDVKIIGESDETGTTVKFKPDPEIFTD 179
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
+++ T+ RIRELAFLN L I L D N + + GG+ E+V+ LN +K+
Sbjct: 180 TTVYEYETLQSRIRELAFLNKGLEIEL----IDERTGTSNSFKYDGGIIEFVKHLNRNKE 235
Query: 316 PLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+H+ + D I ++++LQ+ +D Y++ + +AN+I T +GGTH G K++LTR +
Sbjct: 236 VMHEEPIYVEGSKDHIQVEVSLQY-NDGYTENIHSFANNINTHEGGTHESGFKSALTRII 294
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +K+ +KD D + SG+ VREGLT IISV++P P+FEGQTKT+LGN EVR +V+
Sbjct: 295 NDYARKTGLIKDNDSNFSGDDVREGLTAIISVKIPEPQFEGQTKTKLGNSEVRGIVESFF 354
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E L E+L+ +P V I+ K L A +A AA++AR+L R+KS L SSLPGKLADCSS
Sbjct: 355 AEKLQEFLDENPSVSRKIVEKGLQAARAREAARKARELTRRKSALEVSSLPGKLADCSSK 414
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 415 DASISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVERA 457
>gi|282859419|ref|ZP_06268525.1| DNA gyrase, B subunit [Prevotella bivia JCVIHMP010]
gi|424900188|ref|ZP_18323730.1| DNA gyrase, B subunit [Prevotella bivia DSM 20514]
gi|282587817|gb|EFB93016.1| DNA gyrase, B subunit [Prevotella bivia JCVIHMP010]
gi|388592388|gb|EIM32627.1| DNA gyrase, B subunit [Prevotella bivia DSM 20514]
Length = 656
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/464 (49%), Positives = 316/464 (68%), Gaps = 16/464 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY ++IEV +
Sbjct: 11 YSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCTDIEVTINE 70
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNS++V DNGRGIP+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S V
Sbjct: 71 DNSITVEDNGRGIPVDEHEKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCV 128
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS+ + V+R+G Y Q+Y +GKP+ + V ++ GTR +FWPD +FTT
Sbjct: 129 NALSKHMMSQVFREGKIYQQEYEKGKPLYPVKV----VGETEKTGTRQQFWPDGTIFTTT 184
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY-NEYFFA-GGLEEYVQWLNTDK 314
+ F + +A R+RELA+LN + I L DPE + E F A GL+EYV++++ +
Sbjct: 185 V-FQWDVVARRMRELAYLNAGIKITLIDLRPDPETGKTRTEIFHAKDGLKEYVRYVDRHR 243
Query: 315 KPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+ L +DV+ + + G+ I++A+ + +D Y++ + Y N+I TI+GGTH++G + +LTRT
Sbjct: 244 QHLFNDVIYLKSEKQGVPIEVAIMYNTD-YTENIHSYVNNINTIEGGTHLQGFRTALTRT 302
Query: 374 LNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
L + SK ++ I ++GE REGLT +ISV+V P+FEGQTKT+LGN EV
Sbjct: 303 LKTYADNDAQISKQIEKAKIEITGEDFREGLTAVISVKVAEPQFEGQTKTKLGNSEVSGA 362
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
V Q+V E L+ YLE HP I +K + A A +AA++AR+ V++K+V+ LPGKLA
Sbjct: 363 VQQAVGEALSAYLEEHPSEAKMICNKVVLAATARIAARKARESVQRKNVMTGGGLPGKLA 422
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
DCS+ P++ EIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 423 DCSNKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAIL-PLRGKIL 465
>gi|406907899|gb|EKD48586.1| hypothetical protein ACD_64C00244G0001 [uncultured bacterium]
Length = 806
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/465 (48%), Positives = 313/465 (67%), Gaps = 14/465 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
K Y + I+V+EGLEAVRKRPAMYIGSTGP+GLHHLVYE++DN+VDEA G+ +I V L
Sbjct: 10 KEYKAGSIKVMEGLEAVRKRPAMYIGSTGPQGLHHLVYEVVDNSVDEALGGHCDHITVVL 69
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
D S +V DNGRGIP D+HP SA E VLT LHAGGKF S Y SGGLHGVG+S
Sbjct: 70 NLDGSCTVEDNGRGIPTDIHPTEKISAAEVVLTKLHAGGKFDKDS--YKFSGGLHGVGIS 127
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALSE L +T++++G Y Q + RGK + +L V + ++GT I F PD ++F
Sbjct: 128 VVNALSEWLNMTIYQNGHIYKQTFRRGKAIGSLE----QVGTTKKRGTVIHFMPDFEIFK 183
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
F +T++ R+RELAFLN KL I + +D + ++++F GG+ +VQ +N K
Sbjct: 184 ETTVFSFDTLSARLRELAFLNKKLRIII----TDERNEKKHDFYFEGGIVSFVQDINKKK 239
Query: 315 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
PL +V+ F ++ + ++LA+Q+ +D Y + + + N+I T++GGTH+ G K++LT+
Sbjct: 240 DPLFPEVIYFEQEDENHILELAMQY-NDGYGEQLFSFVNNINTVEGGTHVSGFKSALTKI 298
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
N ++ +K + S S E REGL C+IS++VP P+FEGQTKT+LGN +++ +VD
Sbjct: 299 CNKKAQEMGVLKSGE-SFSSEDSREGLVCVISMKVPEPQFEGQTKTKLGNSDIKGIVDSW 357
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
+L + E +P + IL K+ A +A AAK+ARDL R+K+VL S+ LPGKLADCS+
Sbjct: 358 SFSHLDAFFEENPSIAKKILQKAEIAKRAREAAKKARDLTRRKTVLESAVLPGKLADCSN 417
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P ++E+FIVEGDSAGGSAKQGRDR Q I+ PL+ I A
Sbjct: 418 EDPTQTELFIVEGDSAGGSAKQGRDRNNQAIL-PLKGKILNVEKA 461
>gi|393809327|gb|AFN25837.1| DNA gyrase subunit B [Staphylococcus hominis]
Length = 644
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 244/466 (52%), Positives = 322/466 (69%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 71 IENDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V R+ YHQ Y +G P L + S D+ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EIGSTDKTGTVIRFKADSEIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
+ +++ T+ RIRELAFLN ++I LR E D E+ + Y + GG++ YV+ LN +
Sbjct: 185 SETTVYNYETLQKRIRELAFLNKGISITLRDEREDEEQREDT-YHYEGGIKSYVELLNEN 243
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTR 302
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G +SK +KD LSGE REGLT ++SV+ NP+FEGQTKT+LGN EVR++VD+
Sbjct: 303 VLNSYGTQSKIIKDDKERLSGEDTREGLTAVVSVKHGNPQFEGQTKTKLGNSEVRQIVDR 362
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P+V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPNVARVIVEKGIMASRARVAAKKAREVTRRKSALEISSLPGKLADCS 422
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P+ESEIF+VEGDSAGGS K+GRD + Q I+ PL+ I A
Sbjct: 423 SKNPDESEIFLVEGDSAGGSTKEGRDSKTQAIL-PLRGKILNVEKA 467
>gi|329954160|ref|ZP_08295255.1| DNA gyrase, B subunit [Bacteroides clarus YIT 12056]
gi|328528137|gb|EGF55117.1| DNA gyrase, B subunit [Bacteroides clarus YIT 12056]
Length = 653
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/466 (48%), Positives = 313/466 (67%), Gaps = 12/466 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHLVYE++DN++DEA AGY +IEV +
Sbjct: 12 NYSASNIQVLEGLEAVRKRPAMYIGDISIKGLHHLVYEVVDNSIDEALAGYCDHIEVTIN 71
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+D H KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 72 EDNSITVQDNGRGIPVDFHEKEQKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 129
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS + V+R+G Y Q+Y G P+ + V V + D GTR +FWPD +FT
Sbjct: 130 VNALSTHMTTQVFRNGKIYQQEYECGHPLYS----VKEVGTTDITGTRQQFWPDDTIFTE 185
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTD 313
+ ++++ +A R+RELA+LN + I L E Y + F GL+E+V+++++
Sbjct: 186 TV-YNYDILATRMRELAYLNAGIKITLTDLRVKEEDGSYKQEIFYSVEGLKEFVRYIDSS 244
Query: 314 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
++ L +DV+ + G +++A+ + + +Y++ + Y N+I TI+GGTH+ G + +LTR
Sbjct: 245 REHLVNDVIYINTEKQGTPVEVAIMYNT-SYNENIHSYVNNINTIEGGTHLAGFRRALTR 303
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
TL + +K ++ + +SG+ REGLT +IS++V P+FEGQTKT+LGN EV VDQ
Sbjct: 304 TLKKYAEDNKMLEKAKVEISGDDFREGLTAVISIKVAEPQFEGQTKTKLGNNEVMGAVDQ 363
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+V E L+ YLE HP I+ K + A +A +AA++AR+ V++KS + +PGKLADCS
Sbjct: 364 AVGEALSYYLEEHPKESKMIVDKVILAAQARVAARKARESVQRKSPMSGGGMPGKLADCS 423
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PEE E+F+VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 424 SKDPEECELFLVEGDSAGGSAKQGRNRAFQAIL-PLRGKILNVEKA 468
>gi|393786129|ref|ZP_10374267.1| DNA gyrase, B subunit [Bacteroides nordii CL02T12C05]
gi|392660493|gb|EIY54105.1| DNA gyrase, B subunit [Bacteroides nordii CL02T12C05]
Length = 655
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 228/466 (48%), Positives = 312/466 (66%), Gaps = 12/466 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y ++ IQVLEGLEAVRKRPAMYIG +GLHHLVYEI+DN++DEA AGY +IEV +
Sbjct: 15 SYSADSIQVLEGLEAVRKRPAMYIGDISVKGLHHLVYEIVDNSIDEALAGYCDHIEVTIN 74
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+D H KSALE +TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 75 EDNSITVQDNGRGIPVDFHEKEQKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGVGMSC 132
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS + V+R+G Y Q+Y GKP+ V V + GTR +FWPD +FT
Sbjct: 133 VNALSTHMISQVYRNGKIYQQEYEIGKPLYP----VKEVGESEHTGTRQQFWPDNTIFTE 188
Query: 256 AIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
+ + + +AGR+RELA+LN K+T+ R+ +D K + ++ GL+E+V++L +
Sbjct: 189 TV-YKYEILAGRMRELAYLNAGIKITLTDRRVVNDEGKFKQEIFYSEEGLKEFVRYLESS 247
Query: 314 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
+ L +DV+ + GI I+LA+ + + +S+ + Y N+I TI+GGTH+ G + +LTR
Sbjct: 248 RDHLINDVIYLNTEKQGIPIELAIMYNT-GFSENVHSYVNNINTIEGGTHLAGFRRALTR 306
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
TL + SK ++ + +SG+ REGLT +ISV+V P+FEGQTKT+LGN EV VDQ
Sbjct: 307 TLKKYAEDSKMLEKVKVEISGDDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVMGAVDQ 366
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+V E L YLE HP I+ K + A A AA++AR++V++KS + LPGKLADCS
Sbjct: 367 AVGEALAYYLEEHPKEAKLIVDKVVLAATARHAARKAREMVQRKSPMSGGGLPGKLADCS 426
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P++ E+F+VEGDSAGG+AKQGR+R FQ I+ PL+ I A
Sbjct: 427 DKDPQKCELFLVEGDSAGGTAKQGRNRAFQAIL-PLRGKILNVEKA 471
>gi|296452676|ref|ZP_06894367.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Clostridium
difficile NAP08]
gi|296880071|ref|ZP_06904040.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Clostridium
difficile NAP07]
gi|296258458|gb|EFH05362.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Clostridium
difficile NAP08]
gi|296428938|gb|EFH14816.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Clostridium
difficile NAP07]
Length = 633
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 237/462 (51%), Positives = 323/462 (69%), Gaps = 12/462 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ QIQVLEGLEAVRKRP MYIGST PRGLHHLVYE++DN++DEA GY S+I V
Sbjct: 1 MKQEYGASQIQVLEGLEAVRKRPGMYIGSTSPRGLHHLVYEVVDNSIDEALQGYCSDIYV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
++ D SV V DNGRGIP+++HP T KS LETVLT LHAGGKFGG VSGGLHGVG
Sbjct: 61 SINEDGSVLVKDNGRGIPVEIHPKTGKSTLETVLTNLHAGGKFGGGGY--KVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ + V+ +G Y Q Y +G P + L V +GT I+F PD+ +
Sbjct: 119 VSVVNALSKWMVAEVYLNGKIYKQTYEKGLPTSKLEV----VGESHDKGTMIQFMPDETI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F I+F + T+ R+REL+FLN + I ED + + E+ + GGL EY+++LN
Sbjct: 175 FD-EIEFKYETLEYRLRELSFLNKGIKIVF--EDKREGQEKRKEFHYTGGLVEYIKYLNK 231
Query: 313 DKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+ +HD +V K VD ++LA+Q+ +D Y++ + +AN+I T +GG+H+ G KA+LT
Sbjct: 232 SRTGIHDDIVYIDKKVDDCFVELAMQY-TDGYTENIYSFANNINTHEGGSHLSGFKAALT 290
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
+T+N K++K +K+ D++L GE +REGLT ++SV++P P+FEGQTKT+LGN +R +VD
Sbjct: 291 KTVNDYAKRNKFLKENDVNLLGEDIREGLTAVVSVKLPEPQFEGQTKTKLGNSFMRGIVD 350
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+ L +LE +P I+ K+L A +A AAK+AR+L R+KSVL S+SLPGKLADC
Sbjct: 351 SVTVDELGSFLEENPVTARIIVDKALRAQRAREAAKKARELTRRKSVLESTSLPGKLADC 410
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
+ P +SEIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 411 AEKDPAKSEIFLVEGDSAGGSAKQGRDRNSQAIL-PLRGKIL 451
>gi|406876269|gb|EKD25879.1| hypothetical protein ACD_79C01458G0003 [uncultured bacterium]
Length = 805
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/455 (51%), Positives = 312/455 (68%), Gaps = 13/455 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + I+VLEGLEAVRKRP+MYIG T RGLHHLVYEI+DN++DEA AG+ +I+V +L
Sbjct: 6 YTASSIKVLEGLEAVRKRPSMYIGDTVERGLHHLVYEIVDNSIDEALAGHCKSIDVVILN 65
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV V D+GRGIP+D H KSALE VLTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 66 DGSVYVVDDGRGIPVDWHEGEKKSALEVVLTVLHAGGKFDHDS--YKVSGGLHGVGISVV 123
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS LEV V R G YHQ+Y RG P+ L + GT++ F PD +F
Sbjct: 124 NALSIWLEVEVKRQGKVYHQRYERGAPIQELKV----IGDTTGHGTKVTFKPDPLIFQEI 179
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
F+++ ++ R+RELAFLN + I + D E+N++ E+++ GG++ ++++LN +K
Sbjct: 180 QTFNYDILSARLRELAFLNKGVRITI---DDKREENKFKEFYYEGGIKSFIKFLNENKTL 236
Query: 317 LHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
+HD + + D D + ++LA QW D YS+ + + N+I T +GGTH+ G KASLTRT+N
Sbjct: 237 IHDDIIYILDKKDDVELELAFQWV-DGYSENIFSFCNNINTTEGGTHLSGFKASLTRTIN 295
Query: 376 SLGKKSK-TVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
+ K K VK++ ++LSG+ REG+T +ISV+V +P+FEGQTKT+LGN EV +V+ +
Sbjct: 296 NYIKNKKINVKNEKVALSGDDTREGITAVISVKVVDPKFEGQTKTKLGNSEVAGIVENLM 355
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E +LE +PD IL K A KA AAKRAR+L R+K L S+S+PGKLADC
Sbjct: 356 NERFGSFLEENPDTARKILDKIFLAAKAREAAKRARELTRRKGELDSASMPGKLADCQEK 415
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQ 529
P E+FIVEGDSAGGSAKQGRDR+ Q I+ PL+
Sbjct: 416 NPALCELFIVEGDSAGGSAKQGRDRKNQAIL-PLK 449
>gi|78707357|gb|ABB46484.1| DNA gyrase subunit B [Acholeplasma laidlawii]
Length = 631
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/463 (49%), Positives = 303/463 (65%), Gaps = 13/463 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ IQ+LEGLEAV+KRP MYIGSTG RGLHHLV+EI+DN++DEA GYA I + +L
Sbjct: 5 YTADNIQILEGLEAVKKRPGMYIGSTGERGLHHLVWEIVDNSIDEALGGYADEITIEILK 64
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
+ V DNGRGIP+D+HP T + A+ET+LT LHAGGKF S Y VSGGLHGVG SVV
Sbjct: 65 GEVIRVTDNGRGIPVDIHPKTKRPAVETILTTLHAGGKFDKGS--YKVSGGLHGVGASVV 122
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
N LSE V + +DG Y QKY RG P L S D+ GT I F D +FT
Sbjct: 123 NGLSEWFVVEIHKDGTIYEQKYERGIPAYDLKVK----GSTDKSGTIISFQADPLIFTET 178
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+ +++ T+ RI++LAFLN L + L D E+N+ + + GG+ EYV++LN K
Sbjct: 179 VIYNYETLRTRIQQLAFLNKGLKLNLI--DDRFEENKSESFHYEGGITEYVKFLNQSKSK 236
Query: 317 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
+H D++ K+ DGIT++LA+Q+ D+YS + + N+I T +GG H +G K +LTR ++
Sbjct: 237 IHNDIIYIDKEQDGITVELAMQFV-DSYSPNLHSFTNNISTTEGGMHEDGFKMALTRVIS 295
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
K KD S+SGE REGLT IISV+ P P+FEGQTKT+LGNPEVR + Q
Sbjct: 296 KYADDLKMKKDD--SISGEDTREGLTAIISVKHPEPQFEGQTKTKLGNPEVRAITSQITS 353
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E + +L +P +I+ K L A +A +AA++A+DL R+KS L + KLADC S
Sbjct: 354 EAIERFLMENPAQAKAIVEKVLLATRARVAARKAKDLTRRKSPLDALGFASKLADCRSKD 413
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PE+SEI+IVEGDSAGGSAKQGRD FQ I+ PL+ + A
Sbjct: 414 PEKSEIYIVEGDSAGGSAKQGRDSEFQAIM-PLRGKVLNVEKA 455
>gi|222053121|ref|YP_002535483.1| DNA gyrase subunit B [Geobacter daltonii FRC-32]
gi|221562410|gb|ACM18382.1| DNA gyrase, B subunit [Geobacter daltonii FRC-32]
Length = 794
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/469 (48%), Positives = 321/469 (68%), Gaps = 14/469 (2%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
+ SK YG+++I+VLEGL AVRKRPAMYIGST +GLHHLVYE++DN++DEA AG+ +I
Sbjct: 4 DETSKDYGADKIKVLEGLSAVRKRPAMYIGSTSIQGLHHLVYEVVDNSIDEALAGHCDDI 63
Query: 131 EVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 190
V + D SV+V DNGRGIP D+HP KSA E VLTVLHAGGKF +S Y VSGGLHG
Sbjct: 64 AVTINVDGSVTVVDNGRGIPTDMHPTEGKSAAEVVLTVLHAGGKFDNTS--YKVSGGLHG 121
Query: 191 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 250
VG+SVVNALS+ LE+ + RDG + Q Y G P L V ++GT+I F+PD
Sbjct: 122 VGVSVVNALSKKLELEIRRDGKIFKQSYRCGDPQGPLEV----VGETKKRGTKIIFFPDD 177
Query: 251 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWL 310
++F T +F + ++ R+RELAFLN + I + E ++ + +E+F+ GG+ +V++L
Sbjct: 178 EIFETT-EFSFDILSQRLRELAFLNAGVKIKIVDERTE----KVHEFFYEGGIRSFVEYL 232
Query: 311 NTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
N +K P+H + + G+ +++A+Q+ +D+Y + + +AN+I T +GGTH+ G KA+
Sbjct: 233 NKNKTPIHPQPIFINGEKGGVEMEIAMQY-NDSYDEKVFSFANNINTHEGGTHLVGFKAA 291
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
LTRT+N+ + +K+ ++SGE +REGLT +ISV++ P+FEGQTKT+LGN EV+
Sbjct: 292 LTRTMNTYANTNNLLKNVKENISGEDLREGLTAVISVKISQPQFEGQTKTKLGNSEVKGY 351
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
V+ + E L YLE +P + IL KS+ A +A AA+RARDL R+K L +LPGKLA
Sbjct: 352 VETLMNEKLATYLEENPQIAKRILEKSIDAARAREAARRARDLTRRKGALEVGTLPGKLA 411
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
DC P E+F+VEGDSAGGSAKQGRDR++Q I+ PL+ I A
Sbjct: 412 DCQEKDPALCELFLVEGDSAGGSAKQGRDRKYQAIL-PLKGKILNVEKA 459
>gi|118587497|ref|ZP_01544922.1| DNA gyrase, B subunit [Oenococcus oeni ATCC BAA-1163]
gi|71466856|emb|CAH41002.1| DNA gyrase subunit B [Oenococcus oeni]
gi|118432147|gb|EAV38888.1| DNA gyrase, B subunit [Oenococcus oeni ATCC BAA-1163]
Length = 652
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/466 (48%), Positives = 315/466 (67%), Gaps = 9/466 (1%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ +YG IQ+LEGLEAVRKRP MYIGST GLHHLV+EI+DN +DEA AG+A ++ +
Sbjct: 15 NNSYGGSSIQILEGLEAVRKRPGMYIGSTASSGLHHLVWEIIDNGIDEALAGFAHHVTLT 74
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS+++ D+GRG+P+++ P T + A+E V T+LHAGGKF S Y VSGGLHGVG
Sbjct: 75 IEKDNSITITDDGRGVPVEIQPKTGRPAMEAVFTILHAGGKF--DSKSYKVSGGLHGVGA 132
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ ++V V+RD Y+ + RG T + P+ K +GT + F PD +F
Sbjct: 133 SVVNALSKEMDVRVYRDNKIYYMDFERGHIKTEMKLLDEPMRLK--RGTIVHFAPDPDIF 190
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
I FD+ T+A RIRELAFLN L +++ + DP KN+ + + GG+ EYV++LN +
Sbjct: 191 RETIVFDYRTLASRIRELAFLNKGLRLSITDKRVDPVKNE--SFMYEGGIAEYVKFLNKN 248
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+PL + V + +GI +++ALQ+ +DA ++T++ + N+I T +GGTH G K +LTR
Sbjct: 249 KQPLFPEPVYVEGEENGIQVEVALQY-TDAVAETLMSFTNNIHTHEGGTHETGFKMALTR 307
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N KK +KD D LSGE VREG+T I+S++ P+P+FEGQTKT+LGN + ++ V+
Sbjct: 308 IINDYVKKKGILKDSDDPLSGEDVREGITAIVSIKHPDPQFEGQTKTKLGNTDAQQAVNH 367
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
++ +P+ +I +K L A KA +AAK+ARDL R+KS L S+L GKLAD +
Sbjct: 368 QFSTIFNRFMMENPETARAIANKGLIASKARVAAKKARDLTRKKSGLEISALAGKLADNT 427
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PE SE+FIVEGDSAGGSAKQGR R Q I+ P++ I A
Sbjct: 428 SRDPEISELFIVEGDSAGGSAKQGRSRLTQAIL-PIRGKILNVEKA 472
>gi|78707359|gb|ABB46485.1| DNA gyrase subunit B [Acholeplasma laidlawii]
gi|78707361|gb|ABB46486.1| DNA gyrase subunit B [Acholeplasma laidlawii]
gi|78707363|gb|ABB46487.1| DNA gyrase subunit B [Acholeplasma laidlawii]
Length = 631
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/463 (49%), Positives = 303/463 (65%), Gaps = 13/463 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ IQ+LEGLEAV+KRP MYIGSTG RGLHHLV+EI+DN++DEA GYA I + +L
Sbjct: 5 YTADNIQILEGLEAVKKRPGMYIGSTGERGLHHLVWEIVDNSIDEALGGYADEITIEILK 64
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
+ V DNGRGIP+D+HP T + A+ET+LT LHAGGKF S Y VSGGLHGVG SVV
Sbjct: 65 GEVIRVTDNGRGIPVDIHPKTKRPAVETILTTLHAGGKFDKGS--YKVSGGLHGVGASVV 122
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
N LSE V + +DG Y QKY RG P L S D+ GT I F D +FT
Sbjct: 123 NGLSEWFVVEIHKDGTIYEQKYERGIPAYDLKVK----GSTDKSGTIISFQADPLIFTET 178
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+ +++ T+ RI++LAFLN L + L D E+N+ + + GG+ EYV++LN K
Sbjct: 179 VIYNYETLRTRIQQLAFLNKGLKLNLI--DDRFEENKSESFHYEGGITEYVKFLNQSKSK 236
Query: 317 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
+H D++ K+ DGIT++LA+Q+ D+YS + + N+I T +GG H +G K +LTR ++
Sbjct: 237 IHNDIIYIDKEQDGITVELAMQFV-DSYSPNLHSFTNNISTTEGGMHEDGFKMALTRVIS 295
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
K KD S+SGE REGLT IISV+ P P+FEGQTKT+LGNPEVR + Q
Sbjct: 296 KYADDLKMKKDD--SISGEDTREGLTAIISVKHPEPQFEGQTKTKLGNPEVRAITSQITS 353
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E + +L +P +I+ K L A +A +AA++A+DL R+KS L + KLADC S
Sbjct: 354 EAIERFLMENPAQAKAIVEKVLLATRARVAARKAKDLTRRKSPLDALGFASKLADCRSKD 413
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PE+SEI+IVEGDSAGGSAKQGRD FQ I+ PL+ + A
Sbjct: 414 PEKSEIYIVEGDSAGGSAKQGRDSEFQAIM-PLRGKVLNVEKA 455
>gi|433461798|ref|ZP_20419400.1| DNA gyrase subunit B [Halobacillus sp. BAB-2008]
gi|432189693|gb|ELK46776.1| DNA gyrase subunit B [Halobacillus sp. BAB-2008]
Length = 640
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 236/466 (50%), Positives = 311/466 (66%), Gaps = 15/466 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY +IEVA+
Sbjct: 10 QAYDESQIQVLEGLEAVRKRPGMYIGSTNEKGLHHLVWEIVDNSIDEAMAGYCDHIEVAI 69
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DNS++V DNGRGIP+ + T + A+ET+LTVLHAGGKFGG S LHGVG S
Sbjct: 70 EEDNSITVTDNGRGIPVGIQEKTGRPAVETILTVLHAGGKFGGGGYKVSGG--LHGVGAS 127
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS LEV V RDG Y+Q Y RG P L + D GTRI F PD+++F+
Sbjct: 128 VVNALSTKLEVFVHRDGNIYYQAYHRGVPADDLKV----IGETDITGTRITFKPDEEIFS 183
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIAL--RKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
++ +A R+RELAFLN LTI + ++ D DP +Y F GG+ YV+ +N
Sbjct: 184 ETQEYKFEILANRLRELAFLNKGLTITIDDKRTDEDPV-----QYHFEGGILSYVEHMNR 238
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
++ LHD + D I+I++A+Q+ +D ++ + YAN+I T +GGTH G K LTR
Sbjct: 239 TREVLHDAFFIEGEQDEISIEIAMQY-NDGFASNIYSYANNIHTYEGGTHESGFKTGLTR 297
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N +K+ K+ D +L+G+ VREGLT IIS++ P+P+FEGQTKT+LGN E R V D
Sbjct: 298 VINDYARKNNMFKETDPNLTGDDVREGLTAIISLKHPDPQFEGQTKTKLGNSEARTVTDA 357
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E + +L +P + +I+ K L A +A +AAK+AR+L R+KS L S+LPGKLADCS
Sbjct: 358 LFSENFSRFLFENPQMAKTIVEKGLMASRARMAAKKARELTRRKSALEVSNLPGKLADCS 417
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S + SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 418 SKDAKISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKIINVEKA 462
>gi|225386349|ref|ZP_03756113.1| hypothetical protein CLOSTASPAR_00093 [Clostridium asparagiforme
DSM 15981]
gi|225047531|gb|EEG57777.1| hypothetical protein CLOSTASPAR_00093 [Clostridium asparagiforme
DSM 15981]
Length = 638
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 237/467 (50%), Positives = 316/467 (67%), Gaps = 10/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG++QIQ+LEGLEAVRKRP MYIGST RGLHHLVYEI+DNAVDEA AGY +IEV
Sbjct: 1 MGEQYGADQIQILEGLEAVRKRPGMYIGSTSARGLHHLVYEIVDNAVDEALAGYCDSIEV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V D+GRGIP+ + A+E V T+LHAGGKFG + GY VSGGLHGVG
Sbjct: 61 TINEDNSITVIDDGRGIPVGIQKKAGLPAVEVVFTILHAGGKFG--NGGYKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
SVVNALSE LEV V+ DG Y Q+Y RGK + L ++ GT +RF PDK++
Sbjct: 119 ASVVNALSEWLEVQVYLDGNIYQQRYERGKVMYPL--KIVGKCEPHEHGTHVRFLPDKEI 176
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD++T+ R+RE AFL L I LR D E+ + + + GG+ E+V +LN
Sbjct: 177 FEET-EFDYDTLKIRLRETAFLTKNLKITLR--DDREEEVKEKTFHYEGGIREFVAYLNK 233
Query: 313 DKKPLHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
K PL++ V + + +G+ ++++LQ +D+Y++ + + N+I T +GGTH+ G K +LT
Sbjct: 234 GKTPLYEQVIYCEGTREGVYVEVSLQH-NDSYTEGIYTFVNNINTPEGGTHLTGFKNALT 292
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
+T N +K+K +K+ + SLSGE +REGLT IISV++ +P+FEGQTK +LGN E R VD
Sbjct: 293 KTFNDYARKNKLLKENEDSLSGEDIREGLTAIISVKIEDPQFEGQTKQKLGNSEARTAVD 352
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E LT +LE +P V SI KS+ A +A AA++ARDL R+KS L +LPGKLADC
Sbjct: 353 NVVSEQLTYFLEQNPSVAKSICEKSILAQRARAAARKARDLTRRKSALDGVALPGKLADC 412
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P EI+IVEGDSAGGSAK R R Q I+ PL+ I A
Sbjct: 413 SDKNPVNCEIYIVEGDSAGGSAKTARSRATQAIL-PLRGKILNVEKA 458
>gi|223043343|ref|ZP_03613389.1| DNA gyrase, B subunit [Staphylococcus capitis SK14]
gi|417906712|ref|ZP_12550492.1| DNA gyrase, B subunit [Staphylococcus capitis VCU116]
gi|222443132|gb|EEE49231.1| DNA gyrase, B subunit [Staphylococcus capitis SK14]
gi|341597523|gb|EGS40077.1| DNA gyrase, B subunit [Staphylococcus capitis VCU116]
Length = 639
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 247/466 (53%), Positives = 317/466 (68%), Gaps = 11/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 7 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 66
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 67 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 124
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V+R+ YHQ Y +G P L + D+ GT IRF D ++F
Sbjct: 125 SVVNALSQDLEVYVYRNDTIYHQAYKKGVPQFDLK----EIGETDQTGTAIRFKADGEIF 180
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +++ T+ RIRELAFLN + I LR E + + Y + GG++ YV+ LN +
Sbjct: 181 TETTVYNYETLQQRIRELAFLNKGIQITLRDEREEEGRED--SYHYEGGIKSYVELLNEN 238
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+PLH+ + + D I +++ALQ+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 239 KEPLHEEPIYIHQTKDDIEVEIALQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 297
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G +SK +K+ LSGE REGLT IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 298 ILNSYGIQSKIIKEDKDKLSGEDTREGLTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 357
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
EY +L HP V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 358 LFAEYFERFLFEHPAVGRIIVEKGVMASRARVAAKKAREVTRRKSALDVSSLPGKLADCS 417
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PEESEIF+VEGDSAGGS K GRD R Q I+ PL+ I A
Sbjct: 418 SKNPEESEIFLVEGDSAGGSTKSGRDSRTQAIL-PLRGKILNVEKA 462
>gi|162446893|ref|YP_001620025.1| DNA gyrase subunit B [Acholeplasma laidlawii PG-8A]
gi|161985000|gb|ABX80649.1| DNA gyrase, subunit B [Acholeplasma laidlawii PG-8A]
Length = 635
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/463 (49%), Positives = 303/463 (65%), Gaps = 13/463 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ IQ+LEGLEAV+KRP MYIGSTG RGLHHLV+EI+DN++DEA GYA I + +L
Sbjct: 9 YTADNIQILEGLEAVKKRPGMYIGSTGERGLHHLVWEIVDNSIDEALGGYADEITIEILK 68
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
+ V DNGRGIP+D+HP T + A+ET+LT LHAGGKF S Y VSGGLHGVG SVV
Sbjct: 69 GEVIRVTDNGRGIPVDIHPKTKRPAVETILTTLHAGGKFDKGS--YKVSGGLHGVGASVV 126
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
N LSE V + +DG Y QKY RG P L S D+ GT I F D +FT
Sbjct: 127 NGLSEWFVVEIHKDGTIYEQKYERGIPAYDLKVK----GSTDKSGTIISFQADPLIFTET 182
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+ +++ T+ RI++LAFLN L + L D E+N+ + + GG+ EYV++LN K
Sbjct: 183 VIYNYETLRTRIQQLAFLNKGLKLNLI--DDRFEENKSESFHYEGGITEYVKFLNQSKSK 240
Query: 317 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
+H D++ K+ DGIT++LA+Q+ D+YS + + N+I T +GG H +G K +LTR ++
Sbjct: 241 IHNDIIYIDKEQDGITVELAMQFV-DSYSPNLHSFTNNISTTEGGMHEDGFKMALTRVIS 299
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
K KD S+SGE REGLT IISV+ P P+FEGQTKT+LGNPEVR + Q
Sbjct: 300 KYADDLKMKKDD--SISGEDTREGLTAIISVKHPEPQFEGQTKTKLGNPEVRAITSQITS 357
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E + +L +P +I+ K L A +A +AA++A+DL R+KS L + KLADC S
Sbjct: 358 EAIERFLMENPAQAKAIVEKVLLATRARVAARKAKDLTRRKSPLDALGFASKLADCRSKD 417
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PE+SEI+IVEGDSAGGSAKQGRD FQ I+ PL+ + A
Sbjct: 418 PEKSEIYIVEGDSAGGSAKQGRDSEFQAIM-PLRGKVLNVEKA 459
>gi|448302921|ref|ZP_21492871.1| DNA gyrase subunit B [Natronorubrum sulfidifaciens JCM 14089]
gi|445593928|gb|ELY48095.1| DNA gyrase subunit B [Natronorubrum sulfidifaciens JCM 14089]
Length = 640
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/458 (50%), Positives = 319/458 (69%), Gaps = 8/458 (1%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +I V++
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVSIHD 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSVAD+GRGIP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVADDGRGIPVDTHDEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS LEV V RDG + + G+PV + V +D + GT IRFWPD +F T
Sbjct: 125 NALSSRLEVEVKRDGGVFEHAFESGEPVGDME-RVRDMDPDEGTGTTIRFWPDIDIFETG 183
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
F +T++ R+RELAFLN + I LR E ++ + Y + GG+ E+V++LN +
Sbjct: 184 -DFTFSTLSNRLRELAFLNSGVRITLRDERAEDGPTEET-YEYEGGIREFVEYLNETRSA 241
Query: 317 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
+H DV+ F D I +++A+Q ++ ++ +AN+I T +GG+H+ G K +LTRT+N
Sbjct: 242 MHEDVIYFEDDDQNIEVEVAMQ-ATEELQGSIHAFANNINTREGGSHLTGFKTALTRTVN 300
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
++ + D + +L GE +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ ++
Sbjct: 301 DYAGENDLLGDLEENLKGEDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESAMH 360
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L Y E HPD ++I++K++ A KA AA++A +L R+KS L S+SLPGKLADC +
Sbjct: 361 EGLGTYFEEHPDTAEAIITKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQTKD 420
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
PE++E+FI EGDSAGGSAKQ R+ FQ ++ P++ I
Sbjct: 421 PEKAELFIAEGDSAGGSAKQARNPEFQAVL-PIKGKIL 457
>gi|383111025|ref|ZP_09931843.1| DNA gyrase, B subunit [Bacteroides sp. D2]
gi|313694595|gb|EFS31430.1| DNA gyrase, B subunit [Bacteroides sp. D2]
Length = 652
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/470 (48%), Positives = 311/470 (66%), Gaps = 12/470 (2%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
P + +Y ++ IQVLEGLEAVRKRPAMYIG +GLHHLVYEI+DN++DEA AGY +IE
Sbjct: 8 PNNGSYSADSIQVLEGLEAVRKRPAMYIGDISVKGLHHLVYEIVDNSIDEALAGYCDHIE 67
Query: 132 VALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 191
V + DNS++V DNGRGIP+D H KSALE +TVLHAGGKF S Y VSGGLHGV
Sbjct: 68 VTINEDNSITVQDNGRGIPVDYHEKEKKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGV 125
Query: 192 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 251
G+S VNALS + V+RDG Y Q+Y GKP+ + V V + D GTR +FWPD
Sbjct: 126 GMSCVNALSTHMTTQVFRDGKIYQQEYEIGKPLYS----VKEVGTADITGTRQQFWPDNT 181
Query: 252 VFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYN--EYFFAGGLEEYVQW 309
+FT + +D+ +A R+RELA+LN L I L E + +++ GL E+V++
Sbjct: 182 IFTETV-YDYKILASRLRELAYLNAGLRITLTDRRVVNEDGSFKGEQFYSEEGLREFVRF 240
Query: 310 LNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+ + ++ L +DV+ + GI I++A+ + + +S+ + Y N+I TI+GGTH+ G +
Sbjct: 241 IESSREHLINDVIYLNSEKQGIPIEVAIMYNT-GFSENVHSYVNNINTIEGGTHLAGFRR 299
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
+LTRTL + SK ++ + +SG+ REGLT +ISV+V P+FEGQTKT+LGN EV
Sbjct: 300 ALTRTLKKYAEDSKMLEKVKVEISGDDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVMG 359
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
VDQ+V E L YLE HP +I+ K + A A AA++AR++V++KS + LPGKL
Sbjct: 360 AVDQAVGEVLAYYLEEHPKEAKTIVDKVILAATARHAARKAREMVQRKSPMSGGGLPGKL 419
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
ADCS + E+F+VEGDSAGG+AKQGR+R FQ I+ PL+ I A
Sbjct: 420 ADCSDKDATKCELFLVEGDSAGGTAKQGRNRMFQAIL-PLRGKILNVEKA 468
>gi|23978267|dbj|BAC21121.1| DNA gyrase B subunit [Nodularia sp. PCC 73104]
Length = 396
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/401 (57%), Positives = 300/401 (74%), Gaps = 9/401 (2%)
Query: 102 TGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSA 161
TGPRGLHHLVYE++DN++DEA AG+ ++IEV + AD SV+V D+GRGIPID H T KSA
Sbjct: 1 TGPRGLHHLVYEVVDNSIDEALAGHCTHIEVDINADGSVTVTDDGRGIPIDTHSRTGKSA 60
Query: 162 LETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG 221
LETVLTVLHAGGKFGG S LHGVGLSVVNALS+ LEVTVWRD + Q+Y RG
Sbjct: 61 LETVLTVLHAGGKFGGGGYKVSGG--LHGVGLSVVNALSDVLEVTVWRDNKVHVQRYERG 118
Query: 222 KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIA 281
PVT L + D + + GT I+F PD Q+F ++FD+ TIAGR+RELA+LN + I
Sbjct: 119 VPVTEL---IAKPDKEGKTGTSIKFNPDSQIFINTVEFDYITIAGRLRELAYLNAGVKII 175
Query: 282 L---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQ 337
R E + + Y + GG++EY+ ++N DK+PLH+ ++ + + + ++++LQ
Sbjct: 176 FGDHRLELLKSDTPRIETYEYKGGIKEYIAYMNRDKQPLHEEIIYVHGERNNVQVEVSLQ 235
Query: 338 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 397
WC+DAY+D +LG+AN+IRTIDGGTH+EG+KA LTRTLN++ +K +K+ + +LSGEHVR
Sbjct: 236 WCTDAYTDNVLGFANNIRTIDGGTHLEGLKAVLTRTLNAIARKRNKIKENESNLSGEHVR 295
Query: 398 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 457
EGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E L+EYLE HP + DSIL K++
Sbjct: 296 EGLTAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLSEYLEFHPGIADSILDKAI 355
Query: 458 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEE 498
A KAA AA+ AR+LVR+KSVL SS LPGKLADCSS P E
Sbjct: 356 QAFKAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPSE 396
>gi|359406618|ref|ZP_09199293.1| DNA gyrase, B subunit [Prevotella stercorea DSM 18206]
gi|357555419|gb|EHJ37072.1| DNA gyrase, B subunit [Prevotella stercorea DSM 18206]
Length = 657
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 232/464 (50%), Positives = 311/464 (67%), Gaps = 15/464 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHLV E +DN++DEA AGY ++IEV +
Sbjct: 10 NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLVNETVDNSIDEAMAGYCTDIEVTIN 69
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
D S++V DNGRGIP+D+H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 70 EDESITVQDNGRGIPVDMHAKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 127
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS ++ V+RDG Y Q+Y +GKP+ + V D++GTR +FWPD VFTT
Sbjct: 128 VNALSTRMKSQVFRDGKIYQQEYEKGKPLYPVKV----VGETDKRGTRQQFWPDPTVFTT 183
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDK 314
+ + IA R+RELAFLN + I LR + E E F A GL+E+V++++ +
Sbjct: 184 T-HYQWDIIARRMRELAFLNAGIRITLRDMRPNEEGKTREEVFHAKDGLKEFVRYVDRHR 242
Query: 315 KPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
L DV+ + + GI I++A+ + +D YS+ + Y N+I TI+GGTH+ G +A+LTRT
Sbjct: 243 THLFDDVIYLKTEKQGIPIEVAVMYNTD-YSENIHSYVNNINTIEGGTHLTGFRAALTRT 301
Query: 374 LNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
L + SK ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 302 LKTYADNDPAISKQIEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVAGA 361
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
V Q+V E LT YLE +P I K + A A +AA++AR+ V++K+ + LPGKLA
Sbjct: 362 VQQAVGEALTNYLEENPKEAKMICDKVILAATARIAARKARESVQRKNPMTGGGLPGKLA 421
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
DCS+ P++ EIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 422 DCSNRDPKKCEIFLVEGDSAGGSAKQGRDRYTQAIL-PLRGKIL 464
>gi|198274299|ref|ZP_03206831.1| hypothetical protein BACPLE_00442 [Bacteroides plebeius DSM 17135]
gi|198272789|gb|EDY97058.1| DNA gyrase, B subunit [Bacteroides plebeius DSM 17135]
Length = 654
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/466 (49%), Positives = 306/466 (65%), Gaps = 12/466 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHLVYE++DN++DEA AGY ++IEV +
Sbjct: 12 NYSASSIQVLEGLEAVRKRPAMYIGDISEKGLHHLVYEVVDNSIDEALAGYCTHIEVTIN 71
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+D H KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 72 EDNSITVQDNGRGIPVDFHEKEKKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 129
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS + V+R+G Y Q+Y GKP+ V V + D GTR FWPD +FT
Sbjct: 130 VNALSTHMTTNVFRNGKIYQQEYECGKPLYA----VKEVGTTDITGTRQTFWPDGSIFTV 185
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTD 313
++ ++ + R+RELA+LN +TI L + E Y + F G++E+V++LN++
Sbjct: 186 T-EYKYSILQARMRELAYLNKGITITLTDKRVKEEDGSYKQEKFHSEEGVKEFVRFLNSN 244
Query: 314 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
PL DV+ + GI I+ A+ + + + + + Y N+I TI+GGTH G + +LTR
Sbjct: 245 NTPLIDDVIYLNTEKQGIPIECAIMY-NTGFRENLHSYVNNINTIEGGTHEAGFRMALTR 303
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
L ++SK ++ + +SGE REGL +ISV+V P+FEGQTKT+LGN EV V+Q
Sbjct: 304 VLKKYAEESKALEKAKVEISGEDFREGLIAVISVKVSEPQFEGQTKTKLGNNEVSGAVNQ 363
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+V E LT YLE HP I+ K + A A +AA++AR+ V++KS + LPGKLADCS
Sbjct: 364 AVGEALTYYLEEHPKEAKIIVDKVVLAATARVAARKARESVQRKSPMGGGGLPGKLADCS 423
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S EE E+F+VEGDSAGGSAKQGR R+FQ I+ PL+ I A
Sbjct: 424 SRVAEECELFLVEGDSAGGSAKQGRSRQFQAIL-PLRGKILNVEKA 468
>gi|418618874|ref|ZP_13181726.1| DNA gyrase, B subunit [Staphylococcus hominis VCU122]
gi|374826443|gb|EHR90340.1| DNA gyrase, B subunit [Staphylococcus hominis VCU122]
Length = 640
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 243/466 (52%), Positives = 322/466 (69%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 7 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 66
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 67 IENDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 124
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V R+ YHQ Y +G P L + S D+ GT IRF D ++F
Sbjct: 125 SVVNALSQELEVYVHRNETIYHQAYKKGVPQFDLK----EIGSTDKTGTVIRFKADSEIF 180
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
+ +++ T+ RIRELAFLN ++I LR E D E+ + Y + GG++ YV+ LN +
Sbjct: 181 SETTVYNYETLQKRIRELAFLNKGISITLRDEREDEEQREDT-YHYEGGIKSYVELLNEN 239
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 240 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTR 298
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G +SK +KD LSGE REGLT ++S++ NP+FEGQTKT+LGN EVR++VD+
Sbjct: 299 VLNSYGTQSKIIKDDKERLSGEDTREGLTAVVSIKHGNPQFEGQTKTKLGNSEVRQIVDR 358
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P+V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 359 LFSEHFERFLYENPNVARIIVEKGIMASRARVAAKKAREVTRRKSALEISSLPGKLADCS 418
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P+ESEIF+VEGDSAGGS K+GRD + Q I+ PL+ I A
Sbjct: 419 SKNPDESEIFLVEGDSAGGSTKEGRDSKTQAIL-PLRGKILNVEKA 463
>gi|417643976|ref|ZP_12293998.1| DNA gyrase, B subunit [Staphylococcus warneri VCU121]
gi|445058376|ref|YP_007383780.1| DNA gyrase subunit B [Staphylococcus warneri SG1]
gi|330685298|gb|EGG96959.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU121]
gi|443424433|gb|AGC89336.1| DNA gyrase subunit B [Staphylococcus warneri SG1]
Length = 644
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 243/466 (52%), Positives = 314/466 (67%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA I V
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYADEINVT 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE LEV V R+ YHQ Y +G P L + S D+ GT IRF D +F
Sbjct: 129 SVVNALSEDLEVYVHRNDTIYHQAYKKGVPQFDLK----EIGSTDKTGTAIRFKADSSIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +++ T+ RIRELAFLN + I L E + + Q + Y++ GG++ YV+ LN +
Sbjct: 185 TETTVYNYETLQQRIRELAFLNKGIQITLTDERDEDDIRQ-DSYYYEGGIKSYVEMLNEN 243
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+P+H + + + D I +++A+Q+ + YS +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHGEPIYIHQSKDDIEVEIAIQY-NKGYSTNLLTYANNIHTYEGGTHEDGFKRALTR 302
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G SK +K+ LSGE REGLT IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 303 VLNSYGMNSKIIKEDKDRLSGEDTREGLTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 362
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPSVGRIIVEKGIMASRARVAAKKAREVTRRKSALEISSLPGKLADCS 422
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PEESEIF+VEGDSAGGS K GRD Q I+ PL+ I A
Sbjct: 423 SKNPEESEIFLVEGDSAGGSTKSGRDSSTQAIL-PLRGKILNVEKA 467
>gi|147676340|ref|YP_001210555.1| type IIA topoisomerase, B subunit [Pelotomaculum thermopropionicum
SI]
gi|146272437|dbj|BAF58186.1| type IIA topoisomerase, B subunit [Pelotomaculum thermopropionicum
SI]
Length = 643
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 245/469 (52%), Positives = 323/469 (68%), Gaps = 14/469 (2%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
N + YG+E+IQ+LEGLEAVR+RP MYIGST RGLHHLVYE++DN++DEA AG+ I
Sbjct: 11 NNNNSKYGAEEIQILEGLEAVRRRPGMYIGSTSARGLHHLVYEVVDNSIDEAMAGFCDRI 70
Query: 131 EVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 190
EV L D S +V DNGRGIP+D+HP T + A+E V+T+LHAGGKFGG S LHG
Sbjct: 71 EVILNEDGSATVIDNGRGIPVDIHPKTGRPAVEVVMTMLHAGGKFGGGGYKVSGG--LHG 128
Query: 191 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 250
VG+SVVNALS LEV V RDG Y+Q+YSRG PVT L L GT++ F PD
Sbjct: 129 VGVSVVNALSLWLEVEVKRDGKVYYQRYSRGIPVTGL----LVKGKSSATGTKVTFMPDP 184
Query: 251 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWL 310
++F I F+ + +A R+REL+FLN + I L+ D Q + GG+ ++V++L
Sbjct: 185 EIFEDLI-FNQDILAQRLRELSFLNMGVKIILK----DRRSGQETVFQHDGGIMDFVRYL 239
Query: 311 NTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
N K PLH + +K D + +++ALQ+ +D Y +++L YAN+I TIDGGTH G KA+
Sbjct: 240 NKSKTPLHGKPIYIQKQKDDVLVEVALQY-TDTYVESILSYANNINTIDGGTHEAGFKAA 298
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
LTR +N G+K +K+ +LSGE +REGLT +ISV+VP P+FEGQTKT+LGN EVR +
Sbjct: 299 LTRVINDYGRKYNLLKNGAGNLSGEDIREGLTAVISVKVPEPQFEGQTKTKLGNSEVRSI 358
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
VD V E L +LE +P + IL K+++A +A AA++AR+L R+KS L S+LPGKLA
Sbjct: 359 VDSVVGEGLGIFLEENPSIARRILEKAVTASRAREAARKARELTRRKSALEGSTLPGKLA 418
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
DCS P SE+++VEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 419 DCSERDPSVSELYLVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNVEKA 466
>gi|342218811|ref|ZP_08711414.1| DNA gyrase, B subunit [Megasphaera sp. UPII 135-E]
gi|341588758|gb|EGS32133.1| DNA gyrase, B subunit [Megasphaera sp. UPII 135-E]
Length = 640
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 243/466 (52%), Positives = 323/466 (69%), Gaps = 11/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
K YG+EQIQVLEGLEAVRKRP MYIGST RGLHHLVYE++DN+VDEA AGY ++IEV
Sbjct: 6 QKNYGAEQIQVLEGLEAVRKRPGMYIGSTSLRGLHHLVYEVVDNSVDEALAGYCTHIEVN 65
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ ADNS+ V DNGRGIP+ +H K A+E VLTVLHAGGKFGG GY +SGGLHGVG+
Sbjct: 66 IEADNSIIVKDNGRGIPVAMH-KIGKPAVEVVLTVLHAGGKFGGD--GYPISGGLHGVGI 122
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE ++ V RDG + ++RG T+L P+ + GT + F PD ++F
Sbjct: 123 SVVNALSEWTKIKVKRDGYLWDISFARGITNTSL-VQERPLLDNEETGTEVHFKPDPEIF 181
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
I +D +T+ R+RELAFLN L I L ED K++ EY + GGL +V++LNT+
Sbjct: 182 PD-IVYDFDTLKTRLRELAFLNKGLHITL--EDKRI-KDKKEEYCYKGGLVSFVEFLNTN 237
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ +H VV F + + +D+A+Q+ + YS+ +L + N I T +GGTH+ G + +LTR
Sbjct: 238 KENVHPTVVHFEGQKNQVIVDIAMQYNT-GYSENILTFVNDIFTEEGGTHLSGFRTALTR 296
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N + +K+ + +LSGE VREGLT I+SV+V P+FEGQTKT+LGN EV+ VVD
Sbjct: 297 LINDYARNMGILKENEENLSGEDVREGLTAIVSVKVREPQFEGQTKTKLGNSEVKGVVDT 356
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ L E+ E HP +I++K++SA +A AA+RAR+L R+K+ L SSLPGKLADCS
Sbjct: 357 IFSDGLREFFEEHPVEAKNIINKTISASRARQAARRARELTRRKNALEISSLPGKLADCS 416
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
+EI++VEGDSAGGSAKQGRDR+FQ I+ PL+ I A
Sbjct: 417 EKNSAYTEIYLVEGDSAGGSAKQGRDRKFQAIL-PLRGKIINVEKA 461
>gi|414074131|ref|YP_006999348.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris UC509.9]
gi|413974051|gb|AFW91515.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris UC509.9]
Length = 651
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 232/467 (49%), Positives = 327/467 (70%), Gaps = 10/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA AG+AS+IEV
Sbjct: 11 LADEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALAGFASHIEV 70
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V D+GRGIP+D+ T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 71 FIEPDNSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVG 128
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
SVVNALS +L+VTV +DG +Y Q+Y RG L + D +GT + F PD ++
Sbjct: 129 SSVVNALSTTLDVTVHKDGQKYFQEYHRGLVRDDLKI----IGETDLRGTTVHFVPDPEI 184
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FT ++FD + +A R+RELAFLN L I+L + EKN+ + + + GG++ YV++LN
Sbjct: 185 FTETVEFDFDKLATRVRELAFLNRGLRISLTDKREGNEKNEVH-FHYEGGIQSYVEYLNE 243
Query: 313 DKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K + + F + ++DGI +++A+Q+ +D Y ++ +AN+I T +GGTH +G + +LT
Sbjct: 244 NKTVIFEPAIFTEGEMDGIAVEVAMQY-TDTYHSVVMSFANNINTHEGGTHEQGFRTALT 302
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R +N+ K++K +K+ +L+G+ VREGLT +ISV+ PNP+FEGQTKT+LGN EV +V+
Sbjct: 303 RVINNYAKQNKILKENGDNLTGDDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVTGIVN 362
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+ E LT ++ +P V I+ K + A KA +AAKRAR++ R+KS L S+LPGKLADC
Sbjct: 363 KLFAEALTTFMLENPQVARKIVEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLADC 422
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SS PE++E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 423 SSNNPEQTELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 468
>gi|448309739|ref|ZP_21499594.1| DNA gyrase subunit B [Natronorubrum bangense JCM 10635]
gi|445589405|gb|ELY43638.1| DNA gyrase subunit B [Natronorubrum bangense JCM 10635]
Length = 640
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/460 (50%), Positives = 318/460 (69%), Gaps = 12/460 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +I V++
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVSIHD 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSVAD+GRGIP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVADDGRGIPVDTHDEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS LEV V RDG + + G+PV + V +D + GT IRFWPD +F
Sbjct: 125 NALSSRLEVEVKRDGGVFEHAFEAGEPVGDME-RVRDMDPDEGTGTAIRFWPDTDIFE-G 182
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKE-DSD-PEKNQYNEYFFAGGLEEYVQWLNTDK 314
F +T++ R+RELAFLN + I LR E D D P K Y + GG+ E+V++LN +
Sbjct: 183 DDFAFSTLSNRLRELAFLNSGVRITLRDERDEDGPAKETYE---YQGGIREFVEYLNETR 239
Query: 315 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+H D++ F D I +++A+Q ++ ++ +AN+I T +GGTH+ G K +LTR
Sbjct: 240 SAMHEDIIYFEDDDQNIEVEVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTRC 298
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N ++ + D D +L GE +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ +
Sbjct: 299 VNDYAGENDLLNDLDENLKGEDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESA 358
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
+ E L Y E HPD ++I++K++ A KA AA++A +L R+KS L S+SLPGKLADC +
Sbjct: 359 MHEGLGTYFEEHPDTAEAIITKAVEAAKARKAAQKAEELTRRKSALDSTSLPGKLADCQT 418
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
PE++E+FI EGDSAGGSAKQ R+ FQ ++ P++ I
Sbjct: 419 KDPEKAELFIAEGDSAGGSAKQARNPEFQAVL-PIKGKIL 457
>gi|21675071|ref|NP_663136.1| DNA gyrase subunit B [Chlorobium tepidum TLS]
gi|21648310|gb|AAM73478.1| DNA gyrase subunit B [Chlorobium tepidum TLS]
Length = 647
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/466 (49%), Positives = 314/466 (67%), Gaps = 15/466 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S YG+ IQVL+G+E VRKRPAMYIG RGLHHLVYEI+DNA+DE AGY I VA
Sbjct: 13 STEYGATNIQVLDGIEHVRKRPAMYIGDIHSRGLHHLVYEIVDNAIDETLAGYNDYIHVA 72
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ D SV+V D+GRGIP+D+HP KSALE V+TV+ AGGKF Y VSGGLHGVG
Sbjct: 73 MNPDGSVTVTDHGRGIPVDIHPVKKKSALELVMTVIGAGGKF--DKGAYKVSGGLHGVGA 130
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE EV V+RDG + Q Y RG P V + + D++GT++ F PD ++F
Sbjct: 131 SVVNALSEWCEVEVYRDGKIFRQTYRRGVP----QGGVEEIGTTDQRGTKVTFKPDPEIF 186
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
+F + I R+RELAFLN L I ++ D E N+ + + GGL+E+V++++++
Sbjct: 187 KIT-EFRKDIILDRMRELAFLNSNLRIIVQ----DAEGNE-EIFHYEGGLKEFVRFIDSN 240
Query: 314 K-KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
+ L + + + D +++ALQ+ +D+Y + + Y N+I T +GGTH+ G + +LTR
Sbjct: 241 RLSLLKEPIFLSGERDSTMVEIALQY-NDSYQENIFSYVNNINTHEGGTHVTGFRKALTR 299
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
TLN+ +K+ +K+ I+L+G+ +EGLT +ISV+VP P+FEGQTKT+LGN E + +V+
Sbjct: 300 TLNAYAQKNDLLKNVKITLTGDDFKEGLTAVISVKVPEPQFEGQTKTKLGNSETQSIVET 359
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
V E L E+ E +P L I+ K SA + AA++A++L R+KSVL SS LPGKLADCS
Sbjct: 360 IVNEQLAEFAESNPGTLKLIIEKVKSAAISREAARKAKELTRRKSVLESSGLPGKLADCS 419
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P+ E++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 420 INDPDHCELYIVEGDSAGGSAKQGRDRSFQAIL-PLKGKILNVEKA 464
>gi|399924562|ref|ZP_10781920.1| DNA gyrase subunit B [Peptoniphilus rhinitidis 1-13]
Length = 637
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 228/463 (49%), Positives = 324/463 (69%), Gaps = 12/463 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGL+ VRKRP MYIGSTG RGLHHLVYE++DN++DEA AG +I V +
Sbjct: 8 YDASDIQVLEGLDPVRKRPGMYIGSTGARGLHHLVYEVVDNSIDEALAGICDHIIVKINK 67
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV ++DNG GIP+ HP T KS +ETVLT+LHAGGKF +S Y VSGGLHGVG+SVV
Sbjct: 68 DGSVEISDNGSGIPVATHPQTGKSTVETVLTILHAGGKF--DNSAYKVSGGLHGVGVSVV 125
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS L T+ RDG Y Q+++RGK + L +V+ K+ GT I F PD +F T
Sbjct: 126 NALSNKLVATIKRDGKIYRQEFARGKRKSEL--NVIGKTKKEDTGTTIYFEPDDTIFET- 182
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
++F + ++ R RE+AFLN + I E D KN Y + GG++ +V+++N KKP
Sbjct: 183 VEFSFDVLSKRFREMAFLNKGIKI----EFIDERKNIKEIYHYEGGIKSFVEFINEKKKP 238
Query: 317 LHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
+HD + + ++ + +++A+Q+ +D+YS+ +L +AN+I T +GG+H+ G +++LTRTLN
Sbjct: 239 IHDEIIYIDEIREETAVEIAIQY-TDSYSEVVLAFANNINTEEGGSHLSGFRSALTRTLN 297
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
G+K+ +K+K+ +LSGE VREG++ +ISV++P+P+FEGQTK +LGN E R ++D +
Sbjct: 298 DYGRKNNIIKEKEENLSGEDVREGISAVISVKLPDPQFEGQTKAKLGNSETRGIIDSVLS 357
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L+ +LE +P V IL K+LSA +A AA+RARDL R+K+ + S +LPGKL+DC +
Sbjct: 358 EELSAFLEENPKVGKQILDKALSARRAREAARRARDLTRKKNNIESMTLPGKLSDCQNDD 417
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P +EIF+VEG+SAGGSAK GRD +Q I+ PL+ I A
Sbjct: 418 PSRNEIFLVEGNSAGGSAKDGRDSAYQAIL-PLRGKIMNVEKA 459
>gi|345883105|ref|ZP_08834553.1| DNA gyrase, B subunit [Prevotella sp. C561]
gi|345044076|gb|EGW48124.1| DNA gyrase, B subunit [Prevotella sp. C561]
Length = 657
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/471 (48%), Positives = 320/471 (67%), Gaps = 17/471 (3%)
Query: 71 NPVSKT-YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
NP ++ Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY N
Sbjct: 4 NPENENNYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCHN 63
Query: 130 IEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 189
IEV + DNS++V D+GRGIP+D+H +KSALE V+TVLHAGGKF S Y VSGGLH
Sbjct: 64 IEVTINEDNSITVEDDGRGIPVDMHEKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLH 121
Query: 190 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 249
GVG+S VNALS + V+R+G Y Q+Y +GKP+ + V D+ GTR +FWPD
Sbjct: 122 GVGVSCVNALSTHMMSQVFRNGKIYQQEYEKGKPLYPVKV----VGETDKTGTRQQFWPD 177
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY-NEYFFA-GGLEEYV 307
+F+T + + + +A R+RELA+LN + I L DPE + E F A GL+E+V
Sbjct: 178 PDIFSTTV-YQWSIVARRMRELAYLNAGIKITLTDLRPDPETGKTRTEVFHAKDGLKEFV 236
Query: 308 QWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 366
++++ ++ L DV+ + + I I++A+ + +D Y++ + Y N+I TI+GGTH++G
Sbjct: 237 RYVDRHRQHLFDDVIYLKTEKQNIPIEVAVMYNTD-YTENIHSYVNNINTIEGGTHLQGF 295
Query: 367 KASLTRTLNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLG 422
+A+LTRTL + SK ++ I ++GE REGLT +IS++V P+FEGQTKT+LG
Sbjct: 296 RAALTRTLKAYADNDPQISKQLEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTKLG 355
Query: 423 NPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSS 482
N EV V Q+V E LT+YLE HP+ I +K + A A +AA++AR+ V++K+V+
Sbjct: 356 NSEVAGAVQQAVGEALTDYLEEHPNEAKMICNKVILAATARVAARKARESVQRKNVMSGG 415
Query: 483 SLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LPGKLADCS+ P++ EIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 416 GLPGKLADCSNKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAIL-PLRGKIL 465
>gi|288554611|ref|YP_003426546.1| DNA gyrase subunit B [Bacillus pseudofirmus OF4]
gi|288545771|gb|ADC49654.1| DNA gyrase subunit B [Bacillus pseudofirmus OF4]
Length = 646
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/465 (50%), Positives = 311/465 (66%), Gaps = 12/465 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
++Y QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AG+ I+V +
Sbjct: 15 QSYDESQIQVLEGLEAVRKRPGMYIGSTSGRGLHHLVWEIVDNSIDEAMAGHCDTIQVTI 74
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DNS++V DNGRGIP+ +H + A+E ++TVLHAGGKFGG S LHGVG S
Sbjct: 75 EEDNSITVEDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGAS 132
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS LEV V R+ Y+Q+Y RG P L + +++GT IRF PD ++FT
Sbjct: 133 VVNALSTKLEVEVHRENQVYYQEYHRGVPAADLAV----IGETEKRGTIIRFKPDPEIFT 188
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
+++++ +A R+RELAFLN LTI + + E+N+ + YF+ GG+ +V+ LN K
Sbjct: 189 ETTEYEYDILATRLRELAFLNKGLTITITDK---REENKSSTYFYEGGIASFVEHLNRSK 245
Query: 315 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+ LHD + + DG+ +++A+Q+ +D Y + +AN+I T +GGTH G K LTR
Sbjct: 246 EVLHDEPIHIEAEKDGLNVEVAVQY-NDGYVSNIYSFANNISTHEGGTHESGFKTGLTRV 304
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N +K K+ D +L+GE VREGLT IISV++P+P+FEGQTKT+LGN E R V D
Sbjct: 305 INDYARKHNLFKENDPNLTGEDVREGLTAIISVKIPDPQFEGQTKTKLGNSEARTVTDSL 364
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
E + ++ HP V I+ K L A +A AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 365 FSEAFSRFMIEHPQVGKKIVEKGLMASRAREAAKKARELTRRKSALEVSSLPGKLADCSS 424
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SEI+IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 425 KDATISEIYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKIINVEKA 468
>gi|311032261|ref|ZP_07710351.1| DNA gyrase subunit B [Bacillus sp. m3-13]
Length = 636
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 235/464 (50%), Positives = 314/464 (67%), Gaps = 11/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y IQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY S I V +
Sbjct: 5 SYDESNIQVLEGLEAVRKRPGMYIGSTSAKGLHHLVWEIVDNSIDEALAGYCSEINVIVE 64
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+ +H + A+E ++TVLHAGGKFGG S LHGVG SV
Sbjct: 65 KDNSITVKDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASV 122
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS L++ V RDG ++Q++++G P L + D GT I F PD+++FT
Sbjct: 123 VNALSSELKIYVHRDGKIHYQQFNKGVPNEDLKI----IGETDVTGTIIHFVPDEEIFTE 178
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
++D++T+A R+RELAFLN + I + ED E + NEY + GG+ YV+ LN K+
Sbjct: 179 TKEYDYDTLAHRLRELAFLNKGIRITI--EDKREETPKKNEYHYEGGIASYVEHLNRTKE 236
Query: 316 PLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+H+ V F + + DGI+I++ALQ+ +D+Y+ + +AN+I T +GGTH G K +LTR +
Sbjct: 237 VIHEEVVFVEGEKDGISIEVALQY-NDSYTSNLYSFANNISTYEGGTHESGFKTALTRVI 295
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +K+ KD D +L+GE VREGLT I+S++ P+P+FEGQTKT+LGN E R V D
Sbjct: 296 NDYARKNNIFKDADSNLTGEDVREGLTAIVSIKHPDPQFEGQTKTKLGNSEARTVTDSVF 355
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E +L +P I+ K L A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 356 TEKFEGFLLENPSAARKIVEKGLMASRARMAAKKARELTRRKSALEISSLPGKLADCSSK 415
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SEI++VEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 416 DPSISEIYVVEGDSAGGSAKQGRDRHFQAIL-PLRGKIINVEKA 458
>gi|53711588|ref|YP_097580.1| DNA gyrase B subunit [Bacteroides fragilis YCH46]
gi|60679839|ref|YP_209983.1| DNA gyrase subunit B [Bacteroides fragilis NCTC 9343]
gi|265764971|ref|ZP_06093246.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_16]
gi|336407776|ref|ZP_08588272.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_56FAA]
gi|375356678|ref|YP_005109450.1| DNA gyrase subunit B [Bacteroides fragilis 638R]
gi|383116590|ref|ZP_09937338.1| DNA gyrase, B subunit [Bacteroides sp. 3_2_5]
gi|423248251|ref|ZP_17229267.1| DNA gyrase, B subunit [Bacteroides fragilis CL03T00C08]
gi|423253200|ref|ZP_17234131.1| DNA gyrase, B subunit [Bacteroides fragilis CL03T12C07]
gi|423259366|ref|ZP_17240289.1| DNA gyrase, B subunit [Bacteroides fragilis CL07T00C01]
gi|423263662|ref|ZP_17242665.1| DNA gyrase, B subunit [Bacteroides fragilis CL07T12C05]
gi|423269860|ref|ZP_17248832.1| DNA gyrase, B subunit [Bacteroides fragilis CL05T00C42]
gi|423272686|ref|ZP_17251633.1| DNA gyrase, B subunit [Bacteroides fragilis CL05T12C13]
gi|423282448|ref|ZP_17261333.1| DNA gyrase, B subunit [Bacteroides fragilis HMW 615]
gi|52214453|dbj|BAD47046.1| DNA gyrase B subunit [Bacteroides fragilis YCH46]
gi|60491273|emb|CAH06021.1| DNA gyrase subunit B [Bacteroides fragilis NCTC 9343]
gi|251948137|gb|EES88419.1| DNA gyrase, B subunit [Bacteroides sp. 3_2_5]
gi|263254355|gb|EEZ25789.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_16]
gi|301161359|emb|CBW20899.1| DNA gyrase subunit B [Bacteroides fragilis 638R]
gi|335944855|gb|EGN06672.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_56FAA]
gi|387776946|gb|EIK39046.1| DNA gyrase, B subunit [Bacteroides fragilis CL07T00C01]
gi|392657100|gb|EIY50737.1| DNA gyrase, B subunit [Bacteroides fragilis CL03T12C07]
gi|392660358|gb|EIY53972.1| DNA gyrase, B subunit [Bacteroides fragilis CL03T00C08]
gi|392700706|gb|EIY93868.1| DNA gyrase, B subunit [Bacteroides fragilis CL05T00C42]
gi|392707084|gb|EIZ00204.1| DNA gyrase, B subunit [Bacteroides fragilis CL07T12C05]
gi|392708600|gb|EIZ01706.1| DNA gyrase, B subunit [Bacteroides fragilis CL05T12C13]
gi|404582016|gb|EKA86711.1| DNA gyrase, B subunit [Bacteroides fragilis HMW 615]
Length = 652
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/474 (47%), Positives = 317/474 (66%), Gaps = 13/474 (2%)
Query: 69 KENPVSK-TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYA 127
++NP + +Y ++ IQVLEGLEAVRKRPAMYIG +GLHHLVYEI+DN++DEA AGY
Sbjct: 4 EQNPTNNGSYSADSIQVLEGLEAVRKRPAMYIGDISVKGLHHLVYEIVDNSIDEALAGYC 63
Query: 128 SNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGG 187
+IEV + DNS++V DNGRGIP+D H KSALE +TVLHAGGKF S Y VSGG
Sbjct: 64 DHIEVTINEDNSITVQDNGRGIPVDFHEKEQKSALEVAMTVLHAGGKFDKGS--YKVSGG 121
Query: 188 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 247
LHGVG+S VNALS + V+R+G Y Q+Y GKP+ V V D GT+ +FW
Sbjct: 122 LHGVGMSCVNALSTHMTTQVFRNGKIYQQEYEIGKPLYP----VKEVGIADHTGTKQQFW 177
Query: 248 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL--RKEDSDPEKNQYNEYFFAGGLEE 305
PD +FT I +D+ +A R+RELA+LN L I+L R+ ++ ++ ++ GL E
Sbjct: 178 PDDSIFTETI-YDYKILASRLRELAYLNAGLRISLTDRRVVNEDGSFKHETFYSEEGLRE 236
Query: 306 YVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 364
+V+++ + ++ L +DV+ + I I++A+ + + +S+ + Y N+I TI+GGTH+
Sbjct: 237 FVRFIESSREHLINDVIYLNTEKQNIPIEVAIMYNT-GFSENIHSYVNNINTIEGGTHLA 295
Query: 365 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 424
G + +LTRTL + SK ++ + +SG+ REGLT +ISV+V P+FEGQTKT+LGN
Sbjct: 296 GFRRALTRTLKKYAEDSKMLEKVKVEISGDDFREGLTAVISVKVAEPQFEGQTKTKLGNN 355
Query: 425 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 484
EV VDQ+V E L YLE HP +I+ K + A A AA++AR++V++KS + L
Sbjct: 356 EVMGAVDQAVGEVLNYYLEEHPKEAKAIVDKVILAATARHAARKAREMVQRKSPMSGGGL 415
Query: 485 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PGKLADCS P++ E+F+VEGDSAGG+AKQGR+R FQ I+ PL+ I A
Sbjct: 416 PGKLADCSDKDPQKCELFLVEGDSAGGTAKQGRNRAFQAIL-PLRGKILNVEKA 468
>gi|422882008|ref|ZP_16928464.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK355]
gi|332362817|gb|EGJ40611.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK355]
Length = 649
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/475 (48%), Positives = 329/475 (69%), Gaps = 11/475 (2%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
TE +++ ++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA A
Sbjct: 2 TEEKQQDIQAQEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALA 61
Query: 125 GYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 184
G+AS+I+V + DNS++V DNGRGIP+D+ T + A+ETV TVLHAGGKFGG S
Sbjct: 62 GFASHIQVFIEKDNSITVVDNGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSG 121
Query: 185 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 244
LHGVG SVVNALS L+V V+++G ++Q+YSRG+ V L + DR GT +
Sbjct: 122 G--LHGVGSSVVNALSTQLDVRVYKNGQIHYQEYSRGQVVADLEI----IGETDRTGTTV 175
Query: 245 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 304
F PD ++FT ++FD + R++ELAFLN L I++ + E Q +Y + GG+
Sbjct: 176 HFTPDPEIFTETVEFDFEKLNKRVQELAFLNRGLRISITDKRDGME--QVKDYHYEGGIA 233
Query: 305 EYVQWLNTDKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
YVQ++N +K + + + ++D IT+++A+Q+ + Y +T++ +AN+I T +GGTH
Sbjct: 234 SYVQYINENKDVIFETPIYTDGEMDDITVEVAMQYTT-GYHETVMSFANNIHTHEGGTHE 292
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
+G + +LTR +N KK+K +K+ + +L+GE VREGLT +ISV+ PNP+FEGQTKT+LGN
Sbjct: 293 QGFRTALTRVINDYAKKNKLLKENEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGN 352
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
EV K+ ++ E +++L +P V I+ K + A KA +AAKRAR++ R+KS L S+
Sbjct: 353 SEVVKITNRLFSEAFSDFLLENPAVARKIVEKGILASKARIAAKRAREVTRKKSGLEISN 412
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKLADCSS P+E+E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 413 LPGKLADCSSNDPQETELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 466
>gi|226226219|ref|YP_002760325.1| DNA gyrase subunit B [Gemmatimonas aurantiaca T-27]
gi|226089410|dbj|BAH37855.1| DNA gyrase subunit B [Gemmatimonas aurantiaca T-27]
Length = 658
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 241/486 (49%), Positives = 331/486 (68%), Gaps = 15/486 (3%)
Query: 59 LSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNA 118
+++S A EA ++ YG+ I VL+GLEAVRKRP MYIGST RGLHHLVYE++DN+
Sbjct: 1 MANSNAPEAQED---ENEYGAHSITVLKGLEAVRKRPGMYIGSTSARGLHHLVYEVVDNS 57
Query: 119 VDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGS 178
+DEA AG+A +EV + AD+S+SV D+GRGIP+D+HP +E +TVLHAGGKF +
Sbjct: 58 IDEALAGFAKRVEVTIHADDSISVEDDGRGIPVDVHPIEKLPGVELAMTVLHAGGKFDKN 117
Query: 179 SSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKD 238
+ Y VSGGLHGVG+SVVNALS+ L+V + RDG E+ ++RG VTT L
Sbjct: 118 T--YKVSGGLHGVGVSVVNALSDVLKVWIKRDGKEHFMDFARG--VTTTKLKTLRNVPAK 173
Query: 239 RQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY--NE 296
GT++ F PD +F +++ T+A R+RELAFLN + I LR E D K+ E
Sbjct: 174 ETGTKVWFKPDATIFQETTRYEWATLANRLRELAFLNKGIQITLRDERPDEMKDGQPREE 233
Query: 297 YFFA-GGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSI 354
FFA GGL E+V +L +KKPLH DVV + D I I++ALQ+ +D+Y+D + + N+I
Sbjct: 234 VFFARGGLREFVVFLTGNKKPLHQDVVYLDTERDDIGIEMALQY-NDSYADNVFSFVNNI 292
Query: 355 RTIDGGTHIEGVKASLTRTLNSLGKKSKTV--KDKDISLSGEHVREGLTCIISVRVPNPE 412
T +GGTH+ G K++LT +N ++S + KDK+I LSG+ VREGLT ++SV+V P+
Sbjct: 293 NTHEGGTHLTGFKSALTSVINKYIERSSNLNKKDKEIRLSGDDVREGLTAVLSVKVREPQ 352
Query: 413 FEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDL 472
FEGQTKT+LGN E V + E L++YLE HP ++I+ K++SA +A AA++ARDL
Sbjct: 353 FEGQTKTKLGNSEAEGAVRSVMNELLSQYLEEHPKTANAIIDKAISASRAREAARKARDL 412
Query: 473 VRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESI 532
R+K+ L ++LPGKLADCS + P E+++VEGDSAGGSAKQGR+R FQ I+ PL+ I
Sbjct: 413 TRKKNALDVAALPGKLADCSLSDPALCELYLVEGDSAGGSAKQGRNRNFQAIL-PLRGKI 471
Query: 533 FAFASA 538
A
Sbjct: 472 INVEKA 477
>gi|422871190|ref|ZP_16917683.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK1087]
gi|328945965|gb|EGG40112.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK1087]
Length = 649
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/475 (48%), Positives = 329/475 (69%), Gaps = 11/475 (2%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
TE +++ ++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA A
Sbjct: 2 TEEKQQDIQAQEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALA 61
Query: 125 GYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 184
G+AS+I+V + DNS++V DNGRGIP+D+ T + A+ETV TVLHAGGKFGG S
Sbjct: 62 GFASHIQVFIEKDNSITVVDNGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSG 121
Query: 185 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 244
LHGVG SVVNALS L+V V+++G ++Q+YSRG+ V L + DR GT +
Sbjct: 122 G--LHGVGSSVVNALSTQLDVRVYKNGQIHYQEYSRGQVVADLEI----IGETDRTGTTV 175
Query: 245 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 304
F PD ++FT ++FD + R++ELAFLN L I++ + E Q +Y + GG+
Sbjct: 176 HFTPDPEIFTETVEFDFEKLNKRVQELAFLNRGLRISITDKRDGIE--QVKDYHYEGGIA 233
Query: 305 EYVQWLNTDKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
YVQ++N +K + + + ++D IT+++A+Q+ + Y +T++ +AN+I T +GGTH
Sbjct: 234 SYVQYINENKDVIFETPIYTDGEMDDITVEVAMQYTT-GYHETVMSFANNIHTHEGGTHE 292
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
+G + +LTR +N KK+K +K+ + +L+GE VREGLT +ISV+ PNP+FEGQTKT+LGN
Sbjct: 293 QGFRTALTRVINDYAKKNKLLKENEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGN 352
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
EV K+ ++ E +++L +P V I+ K + A KA +AAKRAR++ R+KS L S+
Sbjct: 353 SEVVKITNRLFSEAFSDFLLENPAVARKIVEKGILASKARIAAKRAREVTRKKSGLEISN 412
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKLADCSS P+E+E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 413 LPGKLADCSSNDPQETELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 466
>gi|372324358|ref|ZP_09518947.1| DNA gyrase subunit B [Oenococcus kitaharae DSM 17330]
gi|366983166|gb|EHN58565.1| DNA gyrase subunit B [Oenococcus kitaharae DSM 17330]
Length = 652
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/466 (47%), Positives = 314/466 (67%), Gaps = 9/466 (1%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG IQ+LEGLEAVRKRP MYIGST GLHHLV+EI+DN +DEA AG+A ++ +
Sbjct: 15 NNAYGGSSIQILEGLEAVRKRPGMYIGSTASSGLHHLVWEIIDNGIDEALAGFAHHVTLT 74
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++V D+GRG+P+++ P T + A+E V T+LHAGGKF S Y VSGGLHGVG
Sbjct: 75 IEKDNSITVTDDGRGVPVEIQPKTGRPAMEAVFTILHAGGKF--DSKNYKVSGGLHGVGA 132
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ ++V V+RDG Y+ + RG T + P+ + +GT + F PD +F
Sbjct: 133 SVVNALSKEMDVRVYRDGKIYYMDFQRGHIQTEMKLLDEPM--RLERGTIVHFAPDPDIF 190
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
FD+NT+A RIRELAFLN L +++ +PEK + + + GG+ EYV++LN +
Sbjct: 191 RETTTFDYNTLASRIRELAFLNKGLRLSITDRRVEPEKKE--SFMYEGGIAEYVKFLNKN 248
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+PL + V + +GI +++ALQ+ +DA ++T++ + N+I T +GGTH G K +LTR
Sbjct: 249 KQPLFPEPVYVEGEENGIQVEVALQY-TDAVAETLMSFTNNIHTHEGGTHETGFKMALTR 307
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N KK +KD D L+GE VREG+T I+S++ P+P+FEGQTKT+LGN + ++ V+
Sbjct: 308 IINDYAKKKGILKDSDDPLTGEDVREGITAIVSIKHPDPQFEGQTKTKLGNTDAQQAVNH 367
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
++ +P+ +I +K + A KA +AAK+ARDL R+KS L S+L GKLAD +
Sbjct: 368 QFSTIFNRFMMENPETARAIANKGIIASKARVAAKKARDLTRRKSGLEISALAGKLADNT 427
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P+ SE+FIVEGDSAGGSAKQGR R Q I+ P++ I A
Sbjct: 428 SKDPDISELFIVEGDSAGGSAKQGRSRLTQAIL-PIRGKILNVEKA 472
>gi|401683255|ref|ZP_10815143.1| DNA gyrase, B subunit [Streptococcus sp. AS14]
gi|400183333|gb|EJO17589.1| DNA gyrase, B subunit [Streptococcus sp. AS14]
Length = 649
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/475 (48%), Positives = 329/475 (69%), Gaps = 11/475 (2%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
TE +++ ++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA A
Sbjct: 2 TEEKQQDIQAQEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALA 61
Query: 125 GYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 184
G+AS+I+V + DNS++V DNGRGIP+D+ T + A+ETV TVLHAGGKFGG S
Sbjct: 62 GFASHIQVFIEKDNSITVVDNGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSG 121
Query: 185 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 244
LHGVG SVVNALS L+V V+++G ++Q+YSRG+ V L + DR GT +
Sbjct: 122 G--LHGVGSSVVNALSTQLDVRVYKNGQIHYQEYSRGQVVADLEI----IGETDRTGTTV 175
Query: 245 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 304
F PD ++FT ++FD + R++ELAFLN L I++ + E Q +Y + GG+
Sbjct: 176 HFTPDPEIFTETVEFDFEKLNKRVQELAFLNRGLRISITDKRDGME--QAKDYHYEGGIA 233
Query: 305 EYVQWLNTDKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
YVQ++N +K + + + ++D IT+++A+Q+ + Y +T++ +AN+I T +GGTH
Sbjct: 234 SYVQYINENKDVIFETPIYTDGEMDDITVEVAMQYTT-GYHETVMSFANNIHTHEGGTHE 292
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
+G + +LTR +N KK+K +K+ + +L+GE VREGLT +ISV+ PNP+FEGQTKT+LGN
Sbjct: 293 QGFRTALTRVINDYAKKNKLLKENEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGN 352
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
EV K+ ++ E +++L +P V I+ K + A KA +AAKRAR++ R+KS L S+
Sbjct: 353 SEVVKITNRLFSEAFSDFLLENPAVARKIVEKGILASKARIAAKRAREVTRKKSGLEISN 412
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKLADCSS P+E+E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 413 LPGKLADCSSNDPQETELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 466
>gi|373498797|ref|ZP_09589298.1| DNA gyrase, B subunit [Fusobacterium sp. 12_1B]
gi|404367389|ref|ZP_10972756.1| DNA gyrase, B subunit [Fusobacterium ulcerans ATCC 49185]
gi|313690309|gb|EFS27144.1| DNA gyrase, B subunit [Fusobacterium ulcerans ATCC 49185]
gi|371960408|gb|EHO78066.1| DNA gyrase, B subunit [Fusobacterium sp. 12_1B]
Length = 635
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/467 (50%), Positives = 313/467 (67%), Gaps = 12/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+S Y +E I VLEGLEAVRKRP MYIG+T RGLHHLV+EI+DNAVDEA AGY I V
Sbjct: 1 MSNNYQAENITVLEGLEAVRKRPGMYIGTTSERGLHHLVWEIVDNAVDEALAGYCDKIIV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+L DN + V DNGRGIP+ +HP NKSALE VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 NILPDNIIEVIDNGRGIPVGIHPKYNKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +VTV DG ++QKY+RG P + + D GT +RF D ++
Sbjct: 119 VSVVNALSEWTDVTVKTDGKIWYQKYNRGIPEEDVKEIGVTTD----HGTSVRFKADHEI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F T I +D+NT+ R++ELA+LN L I L +P K + E+ F GG+ ++++ +
Sbjct: 175 FETLI-YDYNTLKNRLKELAYLNKGLEIHLSDSRKEPYKKE--EFKFEGGIVDFLKEITE 231
Query: 313 D-KKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+ +K + + + +VD +T+D+A + + ++ + + N+I T +GGTH+ G + +LT
Sbjct: 232 ETEKLIPEPIYMSGEVDNVTVDIAFLYTVNQ-AEVIYSFVNNINTHEGGTHVSGFRTALT 290
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R +N +GK +K+KD L G +REG+T I+SV+VP P+FEGQTKT+LGN EV +V
Sbjct: 291 RVINDVGKAQGYLKEKDGKLQGNDIREGVTAIVSVKVPQPQFEGQTKTKLGNSEVTGIVS 350
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V L LE +P+ I+ K L++ KA AA++AR+LV +KSVL SLPGKLADC
Sbjct: 351 TLVGTNLKIVLEDNPNDTKIIIEKILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADC 410
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SS P+E EI+IVEGDSAGGSAKQGRDR Q I+ PL+ I A
Sbjct: 411 SSKNPDECEIYIVEGDSAGGSAKQGRDRSHQAIL-PLRGKILNVEKA 456
>gi|397772628|ref|YP_006540174.1| DNA gyrase, B subunit [Natrinema sp. J7-2]
gi|397681721|gb|AFO56098.1| DNA gyrase, B subunit [Natrinema sp. J7-2]
Length = 642
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/460 (50%), Positives = 320/460 (69%), Gaps = 10/460 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +I V++
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVSIHE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSVAD+GRGIP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVADDGRGIPVDTHEEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LE V RDG+ + + G+PV + V ++ + GT IRFWPD +F T
Sbjct: 125 NALSERLEAEVKRDGV-FRHAFEAGEPVGDME-RVRDMEPDEEPGTEIRFWPDTDIFETG 182
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALR--KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
+ +T++ R+RELAFLN + I LR +E++D Y + GG+ E+V +LN +
Sbjct: 183 -EISFSTLSNRLRELAFLNSGVRITLRDEREETDAGDPVTETYEYDGGIREFVNYLNETR 241
Query: 315 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+HD V+ F + I +++A+Q ++ ++ +AN+I T +GGTH+ G K +LTR
Sbjct: 242 SAMHDDVIYFEDEAQNIQVEVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTRC 300
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N ++ + D D +L GE +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ +
Sbjct: 301 VNDYANENDLLSDLDDNLKGEDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESA 360
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
+ E L Y E HPD ++I++K++ A KA +AA++A +L R+KS L S+SLPGKLADC +
Sbjct: 361 MHEGLGTYFEEHPDTAEAIVAKAVEAAKARMAAQKAEELTRRKSALESTSLPGKLADCQT 420
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P+E+E+FI EGDSAGGSAKQ R+ FQ I+ P++ I
Sbjct: 421 KDPDEAELFIAEGDSAGGSAKQARNPDFQAIL-PIKGKIL 459
>gi|257457903|ref|ZP_05623062.1| DNA gyrase, B subunit [Treponema vincentii ATCC 35580]
gi|257444616|gb|EEV19700.1| DNA gyrase, B subunit [Treponema vincentii ATCC 35580]
Length = 638
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/458 (50%), Positives = 311/458 (67%), Gaps = 16/458 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y +E I VL+GL+AVRKRP MYIGSTGP GLHHLVYE++DN +DEA AGY I V L
Sbjct: 5 SYSAENITVLKGLDAVRKRPGMYIGSTGPDGLHHLVYEVVDNCIDEAMAGYCDTILVVLE 64
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
+++V V DNGRGIP+D+HP SALE VLT LHAGGKF S Y VSGGLHGVG+SV
Sbjct: 65 KNDTVRVEDNGRGIPVDIHPEEGVSALELVLTRLHAGGKFDKGS--YKVSGGLHGVGVSV 122
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS S+E V RDG EY QK++ G+P+ +T ++GT IR+ D +FT
Sbjct: 123 VNALSTSMEAIVCRDGFEYVQKFALGEPLGPVTKR----GETQKRGTTIRWTADPSIFTE 178
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKED-SDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
++ + +A R+RELAFLN + I LR E S P++ + F GGL +V++LN K
Sbjct: 179 TTTYNFDVLAVRLRELAFLNNTIKITLRDERLSTPKEVTFA---FDGGLSHFVRYLNESK 235
Query: 315 KPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+ L + + F + + + +++A+Q+ +D Y + +L + N I T +GGTH+EG K +LTR
Sbjct: 236 QVLPKEPIYFEGEKNDVVVEIAMQY-NDGYKENILSFVNDINTREGGTHLEGFKTALTRV 294
Query: 374 LNSLGKKSKTVK---DKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
+N KK+ + +K+ L GE VR GLT ++SV+VP P+FEGQTKT+LGN EVR +V
Sbjct: 295 MNEFLKKNAKLSKKMEKEEKLMGEDVRAGLTAVLSVKVPEPQFEGQTKTKLGNSEVRSIV 354
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
D + E LT + E +P +D IL K++ A +AA++A++ R+KS L S LPGKLAD
Sbjct: 355 DTFINEKLTLFFEQNPIEIDKILEKAVGEATARIAARKAKEATRRKSGLDSFGLPGKLAD 414
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPL 528
CSS PE+ E++IVEGDSAGGSAK+GRD + Q I+ PL
Sbjct: 415 CSSKDPEKCEVYIVEGDSAGGSAKKGRDSKTQAIL-PL 451
>gi|345881483|ref|ZP_08833001.1| DNA gyrase, B subunit [Prevotella oulorum F0390]
gi|343919448|gb|EGV30195.1| DNA gyrase, B subunit [Prevotella oulorum F0390]
Length = 656
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/464 (49%), Positives = 310/464 (66%), Gaps = 15/464 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY ++IE+ +
Sbjct: 10 NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCTDIEITIN 69
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNSV+V DNGRGIP+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 70 EDNSVTVEDNGRGIPVDEHKKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 127
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS + V+RDG Y Q+Y +GKP+ + V ++GTR +FWPD +FTT
Sbjct: 128 VNALSTHMLSQVYRDGKIYQQEYEKGKPLYPVKV----VGETTKRGTRQQFWPDPTIFTT 183
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDK 314
F + +A R+RELA+LN + I LR + E E F A GL+E+V++++ +
Sbjct: 184 TT-FKWDIVASRMRELAYLNAGIRITLRDLRPNEEGKTREEVFHAKDGLKEFVRYVDRHR 242
Query: 315 KPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
L DV+ + + GI I++A+ + +D YS+ + Y N+I TI+GGTH+ G +A+LTRT
Sbjct: 243 THLFDDVIYLKTEKQGIPIEVAIMYNTD-YSENIHSYVNNINTIEGGTHLTGFRAALTRT 301
Query: 374 LNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
L + +K ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 302 LKAYADAEPSIAKQIEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGA 361
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
V Q+V E L+ YLE HP I K + A A +AA++AR+ V++KSV+ LPGKLA
Sbjct: 362 VQQAVGEALSNYLEEHPIEAKKICEKVVLAATARIAARKARESVQRKSVMSGGGLPGKLA 421
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
DCS+ P++ EIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 422 DCSNKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAIL-PLRGKIL 464
>gi|293370455|ref|ZP_06617008.1| DNA gyrase, B subunit [Bacteroides ovatus SD CMC 3f]
gi|292634447|gb|EFF52983.1| DNA gyrase, B subunit [Bacteroides ovatus SD CMC 3f]
Length = 652
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/470 (48%), Positives = 315/470 (67%), Gaps = 12/470 (2%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
P + +Y ++ IQVLEGLEAVRKRPAMYIG +GLHHLVYEI+DN++DEA A Y +IE
Sbjct: 8 PNNGSYSADSIQVLEGLEAVRKRPAMYIGDISVKGLHHLVYEIVDNSIDEALASYCDHIE 67
Query: 132 VALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 191
V + DNS++V DNGRGIP+D H KSALE +TVLHAGGKF S Y VSGGLHGV
Sbjct: 68 VTINEDNSITVQDNGRGIPVDYHEKEKKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGV 125
Query: 192 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 251
G+S VNALS + V+R+G Y Q+Y GKP+ + V V + D GTR +FWPD
Sbjct: 126 GMSCVNALSTHMTTQVFRNGKIYQQEYEIGKPLYS----VKEVGTADITGTRQQFWPDGT 181
Query: 252 VFTTAIQFDHNTIAGRIRELAFLNPKLTIAL--RKEDSDPEKNQYNEYFFAGGLEEYVQW 309
+FT + +D+ +A R+RELA+LN L I+L R+ ++ + +++ GL E+V++
Sbjct: 182 IFTETV-YDYKILASRLRELAYLNAGLRISLTDRRVVNEDGSFKSEQFYSEEGLREFVRF 240
Query: 310 LNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+ + ++ L +DV+ + GI I++A+ + + +S+ + Y N+I TI+GGTH+ G +
Sbjct: 241 IESSREHLINDVIYLNSEKQGIPIEVAIMYNT-GFSENVHSYVNNINTIEGGTHLAGFRR 299
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
+LTRTL + SK ++ + +SG+ REGLT +ISV+V P+FEGQTKT+LGN EV
Sbjct: 300 ALTRTLKKYAEDSKMLEKVKVEISGDDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVMG 359
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
VDQ+V E L YLE HP +I+ K + A A AA++AR++V++KS + LPGKL
Sbjct: 360 AVDQAVGEVLAYYLEEHPKEAKTIVDKVILAATARHAARKAREMVQRKSPMSGGGLPGKL 419
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
ADCS P + E+F+VEGDSAGG+AKQGR+R FQ I+ PL+ I A
Sbjct: 420 ADCSDKDPSKCELFLVEGDSAGGTAKQGRNRMFQAIL-PLRGKILNVEKA 468
>gi|297558991|ref|YP_003677965.1| DNA gyrase subunit beta [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296843439|gb|ADH65459.1| DNA gyrase, B subunit [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 645
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/462 (50%), Positives = 320/462 (69%), Gaps = 16/462 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + I VLEGLEAVRKRP MYIGSTG RGLHHLVYE++DN+VDEA AG+A IEV LLA
Sbjct: 3 YDAGSITVLEGLEAVRKRPGMYIGSTGERGLHHLVYEVVDNSVDEALAGHADAIEVTLLA 62
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D V VADNGRGIP DLHP + A+E VLT LHAGGKF G S Y+VSGGLHGVG+SVV
Sbjct: 63 DGGVCVADNGRGIPTDLHPVEKRPAVEVVLTTLHAGGKFDGKS--YAVSGGLHGVGVSVV 120
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS +LEV + G + Q+Y P T ++ +S D GT+I FWPD +F T
Sbjct: 121 NALSTALEVEIRLHGHVWRQRYEMTAP----TGELVKGESTDETGTQITFWPDGDIFETT 176
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQ----YNEYFFAGGLEEYVQWLNT 312
F T+A R++E+AFLN L+I +R D PE N + + GL +YV+ +N
Sbjct: 177 T-FSFETLARRMQEMAFLNKGLSITIR--DERPEHTDGGPTVNTFHYDEGLSDYVRHINA 233
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
K+P H ++ F ++ +GI++++A+QW + +Y+ ++ +AN+I T +GGTH EG +++LT
Sbjct: 234 KKEPAHASIISFEEEGEGISVEIAMQW-NQSYTSSVHTFANTINTAEGGTHEEGFRSALT 292
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
+N + K +++KD +L+G+ +REGLT IISV++ +P+FEGQTKT+LGN E + V
Sbjct: 293 TLVNRYARDQKLLREKDDNLTGDDIREGLTAIISVKLADPQFEGQTKTKLGNTEAKSFVQ 352
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+ E+L ++ E +P I+SK+ A +A +AA++ARDL R+K++L ++SLPGKL+DC
Sbjct: 353 KVTNEHLRDWFERNPGEAKDIVSKASQAARARVAARQARDLTRRKTLLETTSLPGKLSDC 412
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ST PEE E++IVEGDSAGGSAK GR+ Q I+ P++ I
Sbjct: 413 QSTNPEECEVYIVEGDSAGGSAKGGRNPHNQAIL-PIRGKIL 453
>gi|419967561|ref|ZP_14483449.1| DNA gyrase subunit B [Rhodococcus opacus M213]
gi|414567069|gb|EKT77874.1| DNA gyrase subunit B [Rhodococcus opacus M213]
Length = 680
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/507 (46%), Positives = 326/507 (64%), Gaps = 42/507 (8%)
Query: 63 IATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEA 122
+A + ++ SK YG+ I VLEGLEAVRKRP MYIGSTG RGLHHL++E++DN+VDEA
Sbjct: 1 MAAQKSDKSTSSKDYGASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEA 60
Query: 123 QAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGY 182
AG+AS +E+ LL D V V D+GRGIP+ +H A+ +E VLT LHAGGKF S Y
Sbjct: 61 MAGHASKVEITLLEDGGVQVVDDGRGIPVGMH-ASGVPTVEVVLTQLHAGGKF--DSDSY 117
Query: 183 SVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGT 242
+VSGGLHGVG+SVVNALS L+V + RDG +++Q Y+ KP ++ ++ GT
Sbjct: 118 AVSGGLHGVGISVVNALSTRLDVDIKRDGFQWNQTYTDSKP-----GELVKGEATKETGT 172
Query: 243 RIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKED--------------SD 288
+ FW D +F T + + T+A R++E+AFLN LTI L E +D
Sbjct: 173 TVTFWADPNIFETTV-YSFETVARRLQEMAFLNKGLTITLTDERVSDAEVTEEVVSQVAD 231
Query: 289 PEKNQYNE----------------YFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGIT 331
K +E Y + GGLE+YV+ +N K+P+H+ VVGF G
Sbjct: 232 APKTAEDESAEAGAPAVHKVKTRVYHYPGGLEDYVRHINRTKQPIHNSVVGFTAKGTGHE 291
Query: 332 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 391
+++A+QW S YS+++ +AN+I T +GGTH EG +++LT T+N K +K+KD L
Sbjct: 292 LEIAMQWNS-GYSESVHTFANTINTHEGGTHEEGFRSALTATVNKYALDKKLLKEKDPKL 350
Query: 392 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 451
+G+ +REGL IISV+V P+FEGQTKT+LGN EVR V ++ E+L+ + E +P +
Sbjct: 351 TGDDIREGLAAIISVKVGEPQFEGQTKTKLGNTEVRSFVQKASNEHLSHWFEANPADAKT 410
Query: 452 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 511
I++K++S+ +A +AA++AR+LVR+KS LPGKLADC S P +SEI+IVEGDSAGG
Sbjct: 411 IVNKAVSSAQARVAARKARELVRRKSATDLGGLPGKLADCRSNDPSKSEIYIVEGDSAGG 470
Query: 512 SAKQGRDRRFQVIINPLQESIFAFASA 538
SAK GRD +Q I+ PL+ I A
Sbjct: 471 SAKSGRDSMYQAIL-PLRGKIINVEKA 496
>gi|424859705|ref|ZP_18283687.1| DNA gyrase, B subunit [Rhodococcus opacus PD630]
gi|356661149|gb|EHI41481.1| DNA gyrase, B subunit [Rhodococcus opacus PD630]
Length = 696
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/507 (46%), Positives = 326/507 (64%), Gaps = 42/507 (8%)
Query: 63 IATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEA 122
+A + ++ SK YG+ I VLEGLEAVRKRP MYIGSTG RGLHHL++E++DN+VDEA
Sbjct: 17 VAAQKSDKSTSSKDYGASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEA 76
Query: 123 QAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGY 182
AG+AS +E+ LL D V V D+GRGIP+ +H A+ +E VLT LHAGGKF S Y
Sbjct: 77 MAGHASKVEITLLEDGGVQVVDDGRGIPVGMH-ASGVPTVEVVLTQLHAGGKF--DSDSY 133
Query: 183 SVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGT 242
+VSGGLHGVG+SVVNALS L+V + RDG +++Q Y+ KP ++ ++ GT
Sbjct: 134 AVSGGLHGVGISVVNALSTRLDVDIKRDGFQWNQTYTDSKP-----GELVKGEATKETGT 188
Query: 243 RIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKED--------------SD 288
+ FW D +F T + + T+A R++E+AFLN LTI L E +D
Sbjct: 189 TVTFWADPNIFETTV-YSFETVARRLQEMAFLNKGLTITLTDERVSDAEVTEEVVSQVAD 247
Query: 289 PEKNQYNE----------------YFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGIT 331
K +E Y + GGLE+YV+ +N K+P+H+ VVGF G
Sbjct: 248 APKTAEDESAEAGAPAVHKVKTRVYHYPGGLEDYVRHINRTKQPIHNSVVGFTAKGTGHE 307
Query: 332 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 391
+++A+QW S YS+++ +AN+I T +GGTH EG +++LT T+N K +K+KD L
Sbjct: 308 LEIAMQWNS-GYSESVHTFANTINTHEGGTHEEGFRSALTATVNKYALDKKLLKEKDPKL 366
Query: 392 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 451
+G+ +REGL IISV+V P+FEGQTKT+LGN EVR V ++ E+L+ + E +P +
Sbjct: 367 TGDDIREGLAAIISVKVGEPQFEGQTKTKLGNTEVRSFVQKASNEHLSHWFEANPADAKT 426
Query: 452 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 511
I++K++S+ +A +AA++AR+LVR+KS LPGKLADC S P +SEI+IVEGDSAGG
Sbjct: 427 IVNKAVSSAQARVAARKARELVRRKSATDLGGLPGKLADCRSNDPSKSEIYIVEGDSAGG 486
Query: 512 SAKQGRDRRFQVIINPLQESIFAFASA 538
SAK GRD +Q I+ PL+ I A
Sbjct: 487 SAKSGRDSMYQAIL-PLRGKIINVEKA 512
>gi|271961616|ref|YP_003335812.1| DNA topoisomerase [Streptosporangium roseum DSM 43021]
gi|270504791|gb|ACZ83069.1| DNA topoisomerase (ATP-hydrolyzing) [Streptosporangium roseum DSM
43021]
Length = 647
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 237/468 (50%), Positives = 327/468 (69%), Gaps = 14/468 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y + I VLEGLEAVRKRP MYIGSTG RGLHHLVYE++DN+VDEA AG+A IEV LL
Sbjct: 2 SYDASSITVLEGLEAVRKRPGMYIGSTGERGLHHLVYEVVDNSVDEALAGHADRIEVTLL 61
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
ADN V V DNGRGIP+ + A + A+E VLTVLHAGGKF S Y+VSGGLHGVG+SV
Sbjct: 62 ADNGVRVVDNGRGIPVGIVEAEGRPAVEVVLTVLHAGGKF--DSKSYAVSGGLHGVGVSV 119
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS LEV + DG + Q Y+ +P+ L + ++ + GT I FW D +F T
Sbjct: 120 VNALSSKLEVEIRTDGHHWQQSYAETRPLHPL----VKGEATEETGTSITFWADSTIFET 175
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE--YFFAGGLEEYVQWLNTD 313
++ T++ R +E+AFLN LTI+LR E D + E Y + GGL ++V+ LN+
Sbjct: 176 TT-WNFETLSRRFQEMAFLNKGLTISLRDERPDHINGEPKEATYHYEGGLSDFVKHLNSK 234
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+P H V+ F + +GI++++A+QW +++YS+++ +AN+I T +GGTH EG +A+LT
Sbjct: 235 KEPAHVSVIDFEESGEGISVEIAMQW-NNSYSESVYTFANTINTAEGGTHEEGFRAALTS 293
Query: 373 TLNSLGKKSKTVKD-KDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
+N ++ K +K+ KD +L+GE +REGLT IISV++ +P+FEGQTKT+LGN E + V
Sbjct: 294 IVNRYAREQKFLKEGKDDNLAGEDIREGLTAIISVKLADPQFEGQTKTKLGNTEAKSFVQ 353
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS-SSLPGKLAD 490
++ ++L ++ E +P I++KSL A +A LAA++ARDL R+KS+L S S LPGKLAD
Sbjct: 354 KACNDHLRDWFERNPGEAKDIINKSLQASRARLAARQARDLTRRKSLLESGSGLPGKLAD 413
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
C + PE+ E+FIVEGDSAGGSAK GRD +FQ I+ P++ I A
Sbjct: 414 CQWSDPEKCELFIVEGDSAGGSAKGGRDSKFQAIL-PIRGKILNVEKA 460
>gi|260591755|ref|ZP_05857213.1| DNA gyrase, B subunit [Prevotella veroralis F0319]
gi|260536039|gb|EEX18656.1| DNA gyrase, B subunit [Prevotella veroralis F0319]
Length = 657
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 228/465 (49%), Positives = 314/465 (67%), Gaps = 16/465 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY NIEV +
Sbjct: 10 NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCQNIEVTIN 69
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V D+GRGIP+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 70 EDNSITVEDDGRGIPVDEHKKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 127
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS + V+RDG Y Q+Y +GKP+ + V + GTR +FWPD +FTT
Sbjct: 128 VNALSTHMMSQVYRDGKIYQQEYEKGKPLYPVKV----VGETQKTGTRQQFWPDPTIFTT 183
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY-NEYFFA-GGLEEYVQWLNTD 313
+ + + +A R+RELA+LN + I L DPE + E F A GL+E+V++++
Sbjct: 184 TV-YQWDIVARRMRELAYLNAGIKITLTDLRPDPETGKTRTEVFHAKDGLKEFVRYVDRH 242
Query: 314 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
++ L DV+ + + I I++A+ + +D Y++ + Y N+I TI+GGTH++G +A+LTR
Sbjct: 243 RQHLFDDVIYLKTEKQNIPIEVAVMYNTD-YTENIHSYVNNINTIEGGTHLQGFRAALTR 301
Query: 373 TLNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
TL S SK ++ I ++GE REGLT +I+++V P+FEGQTKT+LGN EV
Sbjct: 302 TLKSYADNDPQISKQIEKAKIEIAGEDFREGLTAVIAIKVAEPQFEGQTKTKLGNSEVAG 361
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
V Q+V E L++YLE HP+ I +K + A A +AA++AR+ V++K+V+ LPGKL
Sbjct: 362 AVQQAVGEALSDYLEEHPNEAKMICNKVILAATARVAARKARESVQRKNVMSGGGLPGKL 421
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCS+ P++ EIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 422 ADCSNKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAIL-PLRGKIL 465
>gi|332685539|ref|YP_004455313.1| DNA gyrase subunit B [Melissococcus plutonius ATCC 35311]
gi|379726623|ref|YP_005318808.1| DNA gyrase subunit B [Melissococcus plutonius DAT561]
gi|332369548|dbj|BAK20504.1| DNA gyrase subunit B [Melissococcus plutonius ATCC 35311]
gi|376317526|dbj|BAL61313.1| DNA gyrase subunit B [Melissococcus plutonius DAT561]
Length = 650
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 237/469 (50%), Positives = 316/469 (67%), Gaps = 17/469 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DEA AG+A+ I V
Sbjct: 13 AEEYNASQIQVLEGLEAVRKRPGMYIGSTSSEGLHHLVWEIVDNSIDEALAGFATEIRVT 72
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++V D+GRGIP+D+ T + A+ETV T+LHAGGKFGG S LHGVG
Sbjct: 73 IEKDNSITVVDDGRGIPVDIQEKTGRPAVETVFTILHAGGKFGGGGYKVSGG--LHGVGS 130
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS LE V+R+G Y+Q+Y RG V L + DR GT I F PD ++F
Sbjct: 131 SVVNALSTKLEARVYRNGKIYYQEYHRGNVVADLKV----IGDTDRHGTAIHFIPDPEIF 186
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
I+F+ +A R+RELAFLN L I++ ED + +Y++ GG++ YV LN +
Sbjct: 187 KETIEFNFEKLATRVRELAFLNRGLKISI--EDLRGPETVLRDYYYEGGIKSYVGHLNAN 244
Query: 314 KKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
K L D V G +++ IT+++++Q+ +D Y +L +AN+I T +GGTH G K +
Sbjct: 245 KDVLFDEPIYVEGEQQE---ITVEVSMQY-TDGYHSNLLSFANNIHTYEGGTHEAGFKTA 300
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
LTR +N KK K +K+ D +L+GE VREGLTC+IS++ P P+FEGQTKT+LGN EVR V
Sbjct: 301 LTRVINDYAKKQKLMKENDENLTGEDVREGLTCVISIKHPEPQFEGQTKTKLGNSEVRTV 360
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
D+ E+ ++L +P + I+ K L A KA LAAKRAR++ R+K L S+LPGKLA
Sbjct: 361 TDRLFSEHFGKFLMENPTIGKKIVDKGLLASKARLAAKRAREVTRRKGNLEISNLPGKLA 420
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
DCSS E+ E+FIVEGDSAGGSAKQGRDR FQ I+ P++ I A
Sbjct: 421 DCSSREAEKCELFIVEGDSAGGSAKQGRDRMFQAIL-PIRGKILNVEKA 468
>gi|289431959|ref|YP_003461832.1| DNA gyrase subunit beta [Dehalococcoides sp. GT]
gi|288945679|gb|ADC73376.1| DNA gyrase, B subunit [Dehalococcoides sp. GT]
Length = 642
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 239/466 (51%), Positives = 311/466 (66%), Gaps = 14/466 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S+TY + IQVLEGL AVRKRP MYIGST RGLHHLVYEI+ N+VDEA AG I+V
Sbjct: 13 SETYTASDIQVLEGLAAVRKRPGMYIGSTDQRGLHHLVYEIVYNSVDEAMAGVCDRIKVI 72
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ D SVSV DNGRGIP+ +H T SALETV+TVLHAG KFGG + Y VSGGLHGVG
Sbjct: 73 MFKDGSVSVEDNGRGIPVGIHSTTKISALETVMTVLHAGAKFGGKT--YQVSGGLHGVGA 130
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE V V R+G Y Q Y RGKP T L V + GT F D Q+F
Sbjct: 131 SVVNALSEWTTVKVRRNGKIYQQSYLRGKPSTPLE----EVGVSEGSGTTTIFMADSQIF 186
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
+T ++D T+ R+RE+A+LN L + + E SD E+ Y+F GG+ +V+ LN +
Sbjct: 187 STT-EYDFETLTDRLREIAYLNKGLEVYIYDEKSDQERT----YYFEGGITGFVRHLNRN 241
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
++ H + K D +++A+Q+ +D YSD+ L +AN + T+DGGTH+ G +++LTR
Sbjct: 242 REVRHRQPIYITKKSDSTILEVAIQY-NDGYSDSTLTFANCVNTVDGGTHLTGFRSALTR 300
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
N KSK +KD D +L G+ VREG+ I+SV++P P+FEGQTK +LGN E++ V+
Sbjct: 301 AFNDYAHKSKFLKDTDPNLMGDDVREGIVAIVSVKLPEPQFEGQTKGKLGNIEIKSFVES 360
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+V E L+ YLE HPD IL K ++A KA AA++ARDL+ +KS L + +LPGKLADCS
Sbjct: 361 AVAEQLSLYLEEHPDDTKRILEKCITAAKAREAARKARDLIIRKSALDTGTLPGKLADCS 420
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
E+F+VEGDSAGGSAKQGR+RRFQ I+ PL+ I A
Sbjct: 421 ERDASLCELFLVEGDSAGGSAKQGRNRRFQAIL-PLRGKILNVEKA 465
>gi|312109156|ref|YP_003987472.1| DNA gyrase subunit beta [Geobacillus sp. Y4.1MC1]
gi|336233551|ref|YP_004586167.1| DNA gyrase subunit B [Geobacillus thermoglucosidasius C56-YS93]
gi|423718277|ref|ZP_17692459.1| DNA gyrase, B subunit [Geobacillus thermoglucosidans TNO-09.020]
gi|311214257|gb|ADP72861.1| DNA gyrase, B subunit [Geobacillus sp. Y4.1MC1]
gi|335360406|gb|AEH46086.1| DNA gyrase, B subunit [Geobacillus thermoglucosidasius C56-YS93]
gi|383367207|gb|EID44490.1| DNA gyrase, B subunit [Geobacillus thermoglucosidans TNO-09.020]
Length = 640
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 249/473 (52%), Positives = 321/473 (67%), Gaps = 18/473 (3%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E V TY + QIQVLEGLEAVRKRP MYIGSTGP+GLHHLV+EI+DN++DEA AGY +
Sbjct: 4 EQKVEHTYDASQIQVLEGLEAVRKRPGMYIGSTGPKGLHHLVWEIVDNSIDEALAGYCTE 63
Query: 130 IEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 189
I V + D S++V DNGRGIP+D+ + A+E ++TVLHAGGKFGG VSGGLH
Sbjct: 64 INVTIEKDGSITVTDNGRGIPVDIQEKMGRPAVEVIMTVLHAGGKFGGGGY--KVSGGLH 121
Query: 190 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 249
GVG SVVNALSE LEV V RDG ++QKY RG P T L V DR GT + F PD
Sbjct: 122 GVGASVVNALSEELEVYVHRDGKIHYQKYQRGVPCTDLQV----VGETDRTGTTVHFKPD 177
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 309
++FT +FD+ T+A R+RELAFLN L I L ED E N+ NEY + GG++ YV+
Sbjct: 178 PEIFTETTEFDYETLATRLRELAFLNRGLKITL--EDKRVE-NRKNEYCYEGGIQSYVKH 234
Query: 310 LNTDKKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 365
LN ++ LH+ ++G R DGI +++A Q+ +D+YS + + N+I T +GGTH G
Sbjct: 235 LNRTREVLHEEPIYIIGER---DGIYVEIAFQY-NDSYSSNIYSFVNNIHTHEGGTHESG 290
Query: 366 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 425
K +LTR +N +K + KD D +L+GE VREGLT I+S++ P P+FEGQTKT+LGN +
Sbjct: 291 FKMALTRIINDYARKQQIFKDNDPNLTGEDVREGLTAIVSIKHPAPQFEGQTKTKLGNSD 350
Query: 426 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 485
R V D E +L +P + I+ K + A +A LAAK+AR+L R+KS L S+LP
Sbjct: 351 ARTVTDAVFSEQFETFLLENPTIARKIVEKGMMAARARLAAKKARELTRRKSALEISNLP 410
Query: 486 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
GKLADCSS P SE+++VEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 411 GKLADCSSKDPSISELYVVEGDSAGGSAKQGRDRHFQAIL-PLRGKIINVEKA 462
>gi|256419449|ref|YP_003120102.1| DNA gyrase subunit B [Chitinophaga pinensis DSM 2588]
gi|256034357|gb|ACU57901.1| DNA gyrase, B subunit [Chitinophaga pinensis DSM 2588]
Length = 659
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 228/474 (48%), Positives = 312/474 (65%), Gaps = 16/474 (3%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
P S Y + IQVLEGLEAVRKRPAMYIG G +GLHHLVYE++DN++DEA AGY NI
Sbjct: 11 PASSGYDAGSIQVLEGLEAVRKRPAMYIGDIGVKGLHHLVYEVVDNSIDEALAGYCKNIS 70
Query: 132 VALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 191
V + DNS+ V D+GRGIP +HP +SALE V+TVLHAGGKF ++ Y VSGGLHGV
Sbjct: 71 VTICEDNSILVTDDGRGIPTGMHPKEGRSALEVVMTVLHAGGKFDKNT--YKVSGGLHGV 128
Query: 192 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 251
G+S VNALS+ L VTV R+G + Q+Y RG P V + + D GT + F PD +
Sbjct: 129 GVSCVNALSDKLHVTVRREGKLFEQEYQRGVP----QYAVREIGTSDSTGTTVHFKPDNE 184
Query: 252 VFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE-DSDPEKNQYNEYFFA-GGLEEYVQW 309
+F I ++ +AGR+RELA+LN K+ I L + + D N E F++ GG+ E+VQ
Sbjct: 185 IFKETI-YNREILAGRLRELAYLNRKIKITLTDDREKDEAGNSVTETFYSEGGIIEFVQM 243
Query: 310 LNTDKK-----PLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 364
L+ + + P + + +++A+ + +D++S+ + Y N+I TI+GGTH+
Sbjct: 244 LDRNGRRNGLLPDPIFIEAHDASSNVAVEVAVIY-NDSFSENIFSYVNNINTIEGGTHVA 302
Query: 365 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 424
G + ++TR S G K+K + I ++G+ REGL+ IISV+VP P+FEGQTKT+LGN
Sbjct: 303 GFRRAITRIFKSYGDKNKMFEKTKIEVTGDDFREGLSAIISVKVPEPQFEGQTKTKLGNS 362
Query: 425 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 484
+V VVD SV L YLE HP I++K + A +A AA++AR +V++KSVL S L
Sbjct: 363 DVMGVVDSSVAAVLDAYLEEHPREAKIIINKVVLAAQAREAARKARQMVQRKSVLSGSGL 422
Query: 485 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PGKLADCS PE+ E+++VEGDSAGG+AKQGR+R FQ I+ PL+ I A
Sbjct: 423 PGKLADCSENDPEKCELYLVEGDSAGGTAKQGRNRSFQAIL-PLRGKILNVEKA 475
>gi|219851686|ref|YP_002466118.1| DNA gyrase subunit B [Methanosphaerula palustris E1-9c]
gi|219545945|gb|ACL16395.1| DNA gyrase, B subunit [Methanosphaerula palustris E1-9c]
Length = 665
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/497 (46%), Positives = 328/497 (65%), Gaps = 40/497 (8%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++++Y + I VLEGL+ VR+RPAMYIGST RGLHHLVYE++DNAVDEA AG+ I +
Sbjct: 1 MTESYDASHITVLEGLQPVRERPAMYIGSTDTRGLHHLVYEVVDNAVDEALAGFCDLISI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ D S +V DNGRGIP+D KSALETVLT+LHAGGKF ++ Y VSGGLHGVG
Sbjct: 61 TINRDGSCTVDDNGRGIPVDKMQKNGKSALETVLTILHAGGKFDKNT--YQVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHV-------------------LP 233
+SVVNALS SL V+RDG Y ++++GK V+ L+ H
Sbjct: 119 VSVVNALSVSLVADVFRDGNRYRMEFAQGKVVSPLSVHKETLSELLERYRRRYRSEPPRE 178
Query: 234 VDSKDR---------QGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 284
V++K+ GT I F PD +F T + FD++ + R+RE+AFLN +TI +
Sbjct: 179 VETKEALFADEGAKLSGTIITFQPDDSIFET-VTFDYDVLVHRLREMAFLNRGITIRI-- 235
Query: 285 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGF-RKDVDG-ITIDLALQWCSD 341
+D +E+ + GGL E+VQ+L ++ LH DV+ RKD + + +++ALQ+ +
Sbjct: 236 --TDLRSGDKDEFHYDGGLREFVQYLIDGREVLHPDVIDLSRKDEENKLEVEVALQY-TQ 292
Query: 342 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 401
+Y++T+ + NS+ T +GGTH+EG ++++TR +N+ +K+ +K+ ++L GE VREGLT
Sbjct: 293 SYTETVYTFVNSVNTREGGTHLEGFRSAITRAINNSARKANLIKNNTLTLRGEDVREGLT 352
Query: 402 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 461
+IS+++ NP+FEGQTK RLGN VR +VD V + L+EY E +P + +I K+ A +
Sbjct: 353 AVISIKLANPQFEGQTKMRLGNSNVRGIVDSLVYQSLSEYFEENPKSIAAIFEKATVAAQ 412
Query: 462 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 521
A AA+ AR+L R+KS L SS LPGKLADCS P +SE++IVEGDSAGGSAKQGR+RRF
Sbjct: 413 AREAARNARELARRKSTLESSGLPGKLADCSERDPAKSEVYIVEGDSAGGSAKQGRNRRF 472
Query: 522 QVIINPLQESIFAFASA 538
Q I+ PL+ I A
Sbjct: 473 QAIL-PLRGKILNVEKA 488
>gi|332685540|ref|YP_004455314.1| DNA gyrase subunit B [Melissococcus plutonius ATCC 35311]
gi|332369549|dbj|BAK20505.1| DNA gyrase subunit B [Melissococcus plutonius ATCC 35311]
Length = 643
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 237/469 (50%), Positives = 316/469 (67%), Gaps = 17/469 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DEA AG+A+ I V
Sbjct: 6 AEEYNASQIQVLEGLEAVRKRPGMYIGSTSSEGLHHLVWEIVDNSIDEALAGFATEIRVT 65
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++V D+GRGIP+D+ T + A+ETV T+LHAGGKFGG S LHGVG
Sbjct: 66 IEKDNSITVVDDGRGIPVDIQEKTGRPAVETVFTILHAGGKFGGGGYKVSGG--LHGVGS 123
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS LE V+R+G Y+Q+Y RG V L + DR GT I F PD ++F
Sbjct: 124 SVVNALSTKLEARVYRNGKIYYQEYHRGNVVADLKV----IGDTDRHGTAIHFIPDPEIF 179
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
I+F+ +A R+RELAFLN L I++ ED + +Y++ GG++ YV LN +
Sbjct: 180 KETIEFNFEKLATRVRELAFLNRGLKISI--EDLRGPETVLRDYYYEGGIKSYVGHLNAN 237
Query: 314 KKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
K L D V G +++ IT+++++Q+ +D Y +L +AN+I T +GGTH G K +
Sbjct: 238 KDVLFDEPIYVEGEQQE---ITVEVSMQY-TDGYHSNLLSFANNIHTYEGGTHEAGFKTA 293
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
LTR +N KK K +K+ D +L+GE VREGLTC+IS++ P P+FEGQTKT+LGN EVR V
Sbjct: 294 LTRVINDYAKKQKLMKENDENLTGEDVREGLTCVISIKHPEPQFEGQTKTKLGNSEVRTV 353
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
D+ E+ ++L +P + I+ K L A KA LAAKRAR++ R+K L S+LPGKLA
Sbjct: 354 TDRLFSEHFGKFLMENPTIGKKIVDKGLLASKARLAAKRAREVTRRKGNLEISNLPGKLA 413
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
DCSS E+ E+FIVEGDSAGGSAKQGRDR FQ I+ P++ I A
Sbjct: 414 DCSSREAEKCELFIVEGDSAGGSAKQGRDRMFQAIL-PIRGKILNVEKA 461
>gi|403236812|ref|ZP_10915398.1| DNA gyrase subunit B [Bacillus sp. 10403023]
Length = 640
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 236/465 (50%), Positives = 311/465 (66%), Gaps = 12/465 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY I V +
Sbjct: 9 QEYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVII 68
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DNS++V DNGRGIP+ + + A+E ++T+LHAGGKF G GY VSGGLHGVG S
Sbjct: 69 EEDNSITVKDNGRGIPVGIQEKMGRPAVEVIMTILHAGGKFDGG--GYKVSGGLHGVGAS 126
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS SLEV V RDG ++ + RG VT L V D GT F PD ++FT
Sbjct: 127 VVNALSTSLEVYVHRDGKIHYIAFERGHVVTELKV----VGETDHTGTTTHFKPDGEIFT 182
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
+++D +T+A R+RELAFL + I + + E+N+ EY + GG++ YV+ LN K
Sbjct: 183 ETLEYDFDTLATRLRELAFLTRGVKITI---EDKREENKRREYHYEGGIKSYVEHLNRTK 239
Query: 315 KPLHDVVGF-RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+ +H+ F + +GI I++ALQ+ +D+Y+ + +AN+I T +GGTH G K +LTR
Sbjct: 240 EVIHEEPVFVEGEREGIAIEIALQY-NDSYTSNIYSFANNIHTYEGGTHESGFKTALTRI 298
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N +++ KD D +LSG+ VREGLT IISV+ P+P+FEGQTKT+LGN E R V +
Sbjct: 299 INDYARRNNIFKDNDANLSGDDVREGLTAIISVKHPDPQFEGQTKTKLGNSEARTVTESV 358
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
E +L +P V I+ K A +A +AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 359 FSEKFEAFLLENPTVARKIVDKGTMAARARMAAKKARELTRRKSALEVSSLPGKLADCSS 418
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 419 KDPSISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 462
>gi|386712349|ref|YP_006178671.1| DNA gyrase subunit B [Halobacillus halophilus DSM 2266]
gi|384071904|emb|CCG43394.1| DNA gyrase subunit B [Halobacillus halophilus DSM 2266]
Length = 639
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/472 (49%), Positives = 317/472 (67%), Gaps = 12/472 (2%)
Query: 68 FKENPVSK-TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGY 126
KE+ + K +Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AG+
Sbjct: 1 MKEDIIEKESYDESQIQVLEGLEAVRKRPGMYIGSTNEKGLHHLVWEIVDNSIDEAMAGH 60
Query: 127 ASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSG 186
I+V + DNS+SV DNGRGIP+ + T + A+E ++TVLHAGGKFGG S
Sbjct: 61 CDQIQVMIEKDNSISVTDNGRGIPVGIQEKTGRPAVEVIMTVLHAGGKFGGGGYKVSGG- 119
Query: 187 GLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRF 246
LHGVG SVVNALS LEV V RDG ++Q + RG P L + + GTRI+F
Sbjct: 120 -LHGVGASVVNALSSKLEVFVHRDGKIHYQAFHRGVPEEDLKV----IGDTEITGTRIQF 174
Query: 247 WPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEY 306
PD+Q+FT ++++ T+A R RELAFLN LTI++ + +D E Y ++ GG+ Y
Sbjct: 175 KPDEQIFTETVEYNFETLATRTRELAFLNRGLTISIEDKRTDEEPVSY---YYEGGIRSY 231
Query: 307 VQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 366
V+ LN ++ LH+ + D I+I++ALQ+ +D ++ + YAN+I T +GGTH G
Sbjct: 232 VEHLNRTREVLHEPFFIESEQDDISIEIALQY-NDGFASNLYSYANNIHTYEGGTHESGF 290
Query: 367 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 426
K LTR +N +K+ KD D +L+G+ VREGLT IIS++ P+P+FEGQTKT+LGN E
Sbjct: 291 KTGLTRVINDYARKNNMFKDMDPNLTGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEA 350
Query: 427 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 486
R V D E +++L +P++ ++ K L A +A +AAK+AR+L R+K+ L S+LPG
Sbjct: 351 RTVTDALFSEGFSKFLFENPNMARIVVEKGLMASRARMAAKKARELTRRKNALEVSNLPG 410
Query: 487 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
KLADCSS P SEI++VEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 411 KLADCSSKDPSISEIYVVEGDSAGGSAKQGRDRHFQAIL-PLRGKIINVEKA 461
>gi|23978220|dbj|BAC21108.1| DNA gyrase B subunit [Nostoc linckia]
Length = 396
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/401 (57%), Positives = 301/401 (75%), Gaps = 9/401 (2%)
Query: 102 TGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSA 161
TGPRGLHHLVYE++DN++DEA AGY ++IEV + AD SV+V D+GRGIP D H T KSA
Sbjct: 1 TGPRGLHHLVYEVVDNSIDEALAGYCTHIEVDINADGSVTVTDDGRGIPTDTHSRTGKSA 60
Query: 162 LETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG 221
LETV+TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD + Q+Y RG
Sbjct: 61 LETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEIVEVTVWRDKKVHIQRYERG 118
Query: 222 KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIA 281
PVT L V P + R GT + F PD Q+FTT I+FD+ T++GR+RELA+LN + I
Sbjct: 119 APVTDL--QVKPY-KEARTGTSVTFKPDSQIFTTGIEFDYITLSGRLRELAYLNAGVKIT 175
Query: 282 L---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQ 337
R E + + Y + GG++EY+ ++N +K+PLH+ ++ + + + + ++++LQ
Sbjct: 176 FTDHRLELLKSDTPKVESYEYKGGIKEYIAYMNREKQPLHEEIIYVQGERNNVQVEVSLQ 235
Query: 338 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 397
WC+DAY+D +LG+AN+IRT+DGGTH+EG+KA LTRTLN++ +K +K+ + +LSGEHVR
Sbjct: 236 WCTDAYTDNVLGFANNIRTVDGGTHLEGLKAVLTRTLNAIARKRNKIKENEPNLSGEHVR 295
Query: 398 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 457
EGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE HP + D+IL K++
Sbjct: 296 EGLTAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFHPSIADAILDKAI 355
Query: 458 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEE 498
A KAA AA+ AR+LVR+KSVL SS LPGKLADCSS P E
Sbjct: 356 QAFKAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPSE 396
>gi|393809331|gb|AFN25839.1| DNA gyrase subunit B [Staphylococcus hominis]
Length = 644
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 243/466 (52%), Positives = 321/466 (68%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 71 IENDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V R+ YHQ Y +G P L + S D+ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EIGSTDKTGTVIRFKADSEIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
+ +++ T+ RIRELAFLN ++I LR E D E+ + Y + GG++ YV+ LN +
Sbjct: 185 SETTVYNYETLQKRIRELAFLNKGISITLRDEREDEEQREDT-YHYEGGIKSYVELLNEN 243
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRVLTR 302
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G +SK +KD LSGE REGLT ++S++ NP+FEGQTKT+LGN EVR++VD+
Sbjct: 303 VLNSYGTQSKIIKDDKERLSGEDTREGLTAVVSIKHGNPQFEGQTKTKLGNSEVRQIVDR 362
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P+V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPNVARIIVEKGIMASRARVAAKKAREVTRRKSALEISSLPGKLADCS 422
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P+ESEIF+VEGDSAGGS K+GRD + Q I+ PL+ I A
Sbjct: 423 SKNPDESEIFLVEGDSAGGSTKEGRDSKTQAIL-PLRGKILNVEKA 467
>gi|419655199|ref|ZP_14186056.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 2008-988]
gi|380637386|gb|EIB55020.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 2008-988]
Length = 769
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/466 (47%), Positives = 311/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I+V
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK V+ + ++ GT I FWPD Q+
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVVSEFGV----IGKSEKTGTTIEFWPDDQI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LNPK+TI + D ++ + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYEILAKRFRELAYLNPKITINFK----DNRVGKHENFHFEGGISQFVTDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKAIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++G+ VREGL I+SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDNKITGDDVREGLIAIVSVKVPEPQFEGQTKGKLGSTYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYLT+Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|224477952|ref|YP_002635558.1| DNA gyrase subunit B [Staphylococcus carnosus subsp. carnosus
TM300]
gi|222422559|emb|CAL29373.1| DNA gyrase subunit B [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 640
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 241/461 (52%), Positives = 313/461 (67%), Gaps = 10/461 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA IEV
Sbjct: 7 TENYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYADKIEVI 66
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 67 IEKDNWIRVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 124
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE LEV V R+ Y+Q Y RG P L + + GT IRF D ++F
Sbjct: 125 SVVNALSEDLEVYVHRNNKIYNQAYKRGIPQYDLKV----IGETEHNGTEIRFKADPEIF 180
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T + + + RIRELAFLN + I+LR E D + + + Y + GG++ YV+ LN +
Sbjct: 181 TETTTYQYEVLQKRIRELAFLNKGIQISLRDE-RDEDNIREDSYHYEGGIKSYVELLNEN 239
Query: 314 KKPLHDVVGFRKD-VDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+PL D + D D + +++A+Q+ S ++ +L YAN+I T +GGTH +G K +LTR
Sbjct: 240 KEPLFDEPVYVHDRKDDVEVEIAIQYNS-GFTTNLLSYANNIHTYEGGTHEDGFKRALTR 298
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G KS +K+ LSGE REG+T I+S++ +P+FEGQTKT+LGN EVR++VD+
Sbjct: 299 VLNSYGTKSGLIKEDKERLSGEDTREGMTAIVSIKHEDPQFEGQTKTKLGNSEVRQIVDR 358
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E + +L HP V I+ K L A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 359 LSAEDMERFLYEHPQVARIIIEKGLMASRARIAAKKAREVTRRKSALEVSSLPGKLADCS 418
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
S PEESEIF+VEGDSAGGS K GRD R Q I+ PL+ I
Sbjct: 419 SKNPEESEIFLVEGDSAGGSTKLGRDSRTQAIL-PLRGKIL 458
>gi|354611445|ref|ZP_09029401.1| DNA gyrase, B subunit [Halobacterium sp. DL1]
gi|353196265|gb|EHB61767.1| DNA gyrase, B subunit [Halobacterium sp. DL1]
Length = 637
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 239/459 (52%), Positives = 320/459 (69%), Gaps = 13/459 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + QIQVLEGLEAV+KRPAMYIGST RGLHHLVYE++DN++DEA AGY +IEV L
Sbjct: 7 YSAGQIQVLEGLEAVQKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGYCDHIEVTLHE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSV D+GRGIP+D H ++ A+E +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVEDDGRGIPVDTHEEYDRPAVEVILTVLHAGGKFDAKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE L V V RDG +Y +K+ RG+PVT L + D GT IRF PD ++F T
Sbjct: 125 NALSERLAVEVERDGGKYREKFERGEPVTDLE----RLGDSDDTGTLIRFRPDSEIFET- 179
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+ FD++T+ R+RELAFLN + I L E D + + + + + GG+ E+V++LN +
Sbjct: 180 LDFDYSTLETRLRELAFLNSGVEITLTDERGD--EVESSTFKYDGGIREFVEYLNESRDA 237
Query: 317 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LHD V+ F + DGI +++A+Q D S T +AN+I T +GGTH+ G K +LTR +N
Sbjct: 238 LHDDVIYFEDEDDGIQVEIAMQASDDLQSSTH-AFANNINTREGGTHLTGFKTALTRVVN 296
Query: 376 SLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
++ + + D +L GE +REGLT +ISV+ P+P+FEGQTKT+LGN +VR +V+ V
Sbjct: 297 DYANENDLLGELDGENLKGEDIREGLTAVISVKHPDPQFEGQTKTKLGNSDVRGIVEGVV 356
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E + Y E +PD +++ K++ A KA AAK+A +L R+KS L S+SLPGKLADC +
Sbjct: 357 HEGIGTYFEENPDTARAVVLKAVEAAKARKAAKKAEELTRRKSALSSTSLPGKLADCQTK 416
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P+++E+FIVEGDSAGGSAKQGR+ FQ I+ PL I
Sbjct: 417 DPDDAELFIVEGDSAGGSAKQGRNPEFQAIL-PLGGKIL 454
>gi|383812021|ref|ZP_09967468.1| DNA gyrase, B subunit [Prevotella sp. oral taxon 306 str. F0472]
gi|383355407|gb|EID32944.1| DNA gyrase, B subunit [Prevotella sp. oral taxon 306 str. F0472]
Length = 657
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/465 (48%), Positives = 314/465 (67%), Gaps = 16/465 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY NIE+ +
Sbjct: 10 NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCQNIEITIN 69
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V D+GRGIP+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 70 EDNSITVEDDGRGIPVDEHKKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 127
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS + V+RDG Y Q+Y +GKP+ + V + GTR +FWPD +FTT
Sbjct: 128 VNALSTHMMSQVYRDGKIYQQEYEKGKPLYPVKV----VGETQKTGTRQQFWPDPTIFTT 183
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY-NEYFFA-GGLEEYVQWLNTD 313
+ + + +A R+RELA+LN + I L DPE + E F A GL+E+V++++
Sbjct: 184 TV-YQWDIVARRMRELAYLNAGIKITLTDLRPDPETGKTRTEVFHAKDGLKEFVRYVDRH 242
Query: 314 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
++ L DV+ + + I I++A+ + +D Y++ + Y N+I TI+GGTH++G +A+LTR
Sbjct: 243 RQHLFDDVIYLKTEKQNIPIEVAVMYNTD-YTENIHSYVNNINTIEGGTHLQGFRAALTR 301
Query: 373 TLNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
TL S SK ++ I ++GE REGLT +I+++V P+FEGQTKT+LGN EV
Sbjct: 302 TLKSYADNDPQISKQIEKAKIEIAGEDFREGLTAVIAIKVAEPQFEGQTKTKLGNSEVAG 361
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
V Q+V E L++YLE HP+ I +K + A A +AA++AR+ V++K+V+ LPGKL
Sbjct: 362 AVQQAVGEALSDYLEEHPNEAKMICNKVILAATARVAARKARESVQRKNVMSGGGLPGKL 421
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCS+ P++ EIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 422 ADCSNKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAIL-PLRGKIL 465
>gi|300862234|ref|ZP_07108314.1| DNA gyrase, B subunit [Enterococcus faecalis TUSoD Ef11]
gi|428765686|ref|YP_007151797.1| DNA gyrase subunit B [Enterococcus faecalis str. Symbioflor 1]
gi|300848759|gb|EFK76516.1| DNA gyrase, B subunit [Enterococcus faecalis TUSoD Ef11]
gi|427183859|emb|CCO71083.1| DNA gyrase subunit B [Enterococcus faecalis str. Symbioflor 1]
Length = 649
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/466 (50%), Positives = 316/466 (67%), Gaps = 11/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DEA AG+A +I+V
Sbjct: 12 AQEYDASQIQVLEGLEAVRKRPGMYIGSTSGEGLHHLVWEIVDNSIDEALAGFAKSIQVI 71
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ D+S++V D+GRGIP+ + T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 72 IEPDDSITVIDDGRGIPVGIQAKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGS 129
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS SL+V V++DG Y+Q+Y RG V L ++ DR GT + F PD ++F
Sbjct: 130 SVVNALSTSLDVRVYKDGKVYYQEYRRGAVVDDLKV----IEETDRHGTTVHFIPDPEIF 185
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +D + +A R+RELAFLN L I++ ED + EY + GG++ YV+ LN +
Sbjct: 186 TETTVYDFDKLATRVRELAFLNRGLHISI--EDRREGQEDKKEYHYEGGIKSYVEHLNAN 243
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K + + V + IT+++++Q+ +D Y +L +AN+I T +GGTH G K SLTR
Sbjct: 244 KDVIFPEPVFIEGEQQDITVEVSMQY-TDGYHSNILSFANNIHTYEGGTHESGFKTSLTR 302
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N +K K +K+ D L+GE VREGLT ++S++ P+P+FEGQTKT+LGN EVR V D+
Sbjct: 303 VINDYARKQKLMKENDEKLTGEDVREGLTAVVSIKHPDPQFEGQTKTKLGNSEVRTVTDR 362
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
EY T++L +P V I+ K + A KA LAAKRAR++ R+K L S+LPGKLADCS
Sbjct: 363 LFSEYFTKFLMENPTVGKQIVEKGMLASKARLAAKRAREVTRRKGALEISNLPGKLADCS 422
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PE+ E+FIVEGDSAGGSAKQGR R FQ I+ P++ I A
Sbjct: 423 SKDPEKCELFIVEGDSAGGSAKQGRSREFQAIL-PIRGKILNVEKA 467
>gi|239616758|ref|YP_002940080.1| DNA gyrase, B subunit [Kosmotoga olearia TBF 19.5.1]
gi|239505589|gb|ACR79076.1| DNA gyrase, B subunit [Kosmotoga olearia TBF 19.5.1]
Length = 631
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/469 (49%), Positives = 321/469 (68%), Gaps = 28/469 (5%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+S Y ++ I++L+GLE VR+RP MYIGSTG GLHHL+YE++DN++DE GY I++
Sbjct: 1 MSTDYNAQSIKILKGLEPVRQRPGMYIGSTGKAGLHHLIYEVVDNSIDEVVGGYCDYIKI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ D SVSV DNGRGIP+D+HP T SALE V+T LHAGGKF S Y +SGGLHGVG
Sbjct: 61 TIFEDGSVSVWDNGRGIPVDIHPETGTSALEVVMTTLHAGGKF--SKDSYKISGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EV V+RDG Y Q+Y RGKP T + + D++G+ + F PD V
Sbjct: 119 VSVVNALSEWMEVKVYRDGKIYRQRYERGKPTTPVEI----IGETDKRGSLVAFKPDSLV 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE---YFFAGGLEEYVQW 309
FTT FD + + R +ELAFLNP++TI E +Y+E + F GG+ E+V++
Sbjct: 175 FTTT-DFDFDILESRFKELAFLNPRVTIEF-------EDRRYDEKRVFHFEGGIVEFVKY 226
Query: 310 LN-----TDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 364
LN +K+P + + G DV I LA+Q+ ++AY + +L + N+I+T++GGTH+
Sbjct: 227 LNRKKTAINKEPFY-IEGTYNDV---KIQLAMQY-TNAYDENILTFVNNIKTVEGGTHLT 281
Query: 365 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 424
G K LT+ +N +K +KDKD +L GE VREGLT ++SV V P+FEGQTK +LGN
Sbjct: 282 GFKTVLTKMMNDYARKLNVLKDKDPNLQGEDVREGLTAVLSVFVKEPQFEGQTKAKLGNE 341
Query: 425 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 484
EV + V + +++ L E + H L +I+ K+L A KA +AAK+AR+++R+K+ L +++L
Sbjct: 342 EVYEAVIKVLRDKLPEVFDYHTKELKAIIIKALDAAKARVAAKKAREMIRRKNALENTTL 401
Query: 485 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
PGKLADC+ST E +E+FIVEGDSAGGSAKQ RDR FQ I+ PL+ I
Sbjct: 402 PGKLADCTSTDLETTELFIVEGDSAGGSAKQARDREFQAIL-PLRGKIL 449
>gi|377832540|ref|ZP_09815498.1| DNA gyrase, B subunit [Lactobacillus mucosae LM1]
gi|377553732|gb|EHT15453.1| DNA gyrase, B subunit [Lactobacillus mucosae LM1]
Length = 650
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/474 (49%), Positives = 311/474 (65%), Gaps = 9/474 (1%)
Query: 66 EAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAG 125
EA K+ ++ Y + QIQVL+GLEAVRKRP MYIGST +GLHHLV+EI+DN +DEA AG
Sbjct: 7 EAEKKAELASEYDASQIQVLKGLEAVRKRPGMYIGSTSAQGLHHLVWEIVDNGIDEALAG 66
Query: 126 YASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVS 185
+ I V + DNS++V DNGRGIP+D+ T K ALETV TVLHAGGKFG S GY VS
Sbjct: 67 FCDEINVVVEPDNSITVTDNGRGIPVDIQKETGKPALETVFTVLHAGGKFG--SGGYKVS 124
Query: 186 GGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIR 245
GGLHGVG SVVNALS L+V V R G EY+ + G T + V S+ + GTR+
Sbjct: 125 GGLHGVGASVVNALSTELDVYVTRQGKEYYMDFDHGHVKTPMKV-VKEGVSELKHGTRVH 183
Query: 246 FWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEE 305
F PD ++F ++ T+ RIREL+FLN L I + ED EK E+ + GG+
Sbjct: 184 FKPDPEIFRETTVYNIKTLTDRIRELSFLNKGLKITI--EDKREEKPTRQEFHYEGGIRH 241
Query: 306 YVQWLNTDKKPLHDVVGFRKDVD-GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 364
YV++LN ++ L D + + D GIT++++LQ+ + Y T++ + N+I T +GGTH
Sbjct: 242 YVEFLNEGQEVLFDPPIYVEGEDKGITVEVSLQYTT-GYRSTLMTFTNNIHTYEGGTHET 300
Query: 365 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 424
G K +LTR +N G+KS +K + +LSG+ VREGLT ++S++ P+P+FEGQTKT+LGN
Sbjct: 301 GFKTALTRVINDYGRKSGQLKG-NTTLSGDDVREGLTAVVSIKHPDPQFEGQTKTKLGNS 359
Query: 425 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 484
+ R D E +L +PD I+ K + A KA +AAKRAR++ R+KS L S L
Sbjct: 360 DARTATDHIFSEMFARFLMENPDTAHKIVEKGMLASKARVAAKRAREVTRKKSGLEISRL 419
Query: 485 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PGKLAD +S PE SE+FIVEGDSAGGSAKQGR R Q I+ P++ I A
Sbjct: 420 PGKLADNTSKDPEISELFIVEGDSAGGSAKQGRSRLTQAIL-PIRGKILNVEKA 472
>gi|312142414|ref|YP_003993860.1| DNA gyrase subunit B [Halanaerobium hydrogeniformans]
gi|311903065|gb|ADQ13506.1| DNA gyrase, B subunit [Halanaerobium hydrogeniformans]
Length = 640
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 233/468 (49%), Positives = 322/468 (68%), Gaps = 14/468 (2%)
Query: 68 FKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYA 127
FKE Y +E IQVLEGLEAVRKRP MYIGST GLHHLVYE++DN++DEA AGY
Sbjct: 3 FKERS---NYEAEHIQVLEGLEAVRKRPGMYIGSTSTEGLHHLVYEVVDNSIDEAMAGYC 59
Query: 128 SNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGG 187
+ I V + N + V DNGRGIP++ HP +K A+E V+T LHAGGKFGG GY VSGG
Sbjct: 60 TEIIVEIQPGNIIKVKDNGRGIPVENHPKIDKPAVEVVMTTLHAGGKFGGE--GYKVSGG 117
Query: 188 LHGVGLSVVNALSESLEVTV-WRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRF 246
LHGVG+SVVNAL+E +EV + W+DG Y QKY RG P L + DS D GT I F
Sbjct: 118 LHGVGISVVNALTEWMEVEIAWKDGKVYKQKYERGVPQHELRA-IGSCDS-DCTGTTIEF 175
Query: 247 WPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEY 306
D Q+F I +++ +A R++ELAFLN L I + DS ++ + +EY + GGL +
Sbjct: 176 KADPQIFE-EIDYEYRNLAQRLKELAFLNKGLKIKII--DSRVDETKEDEYQYDGGLVSF 232
Query: 307 VQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 365
V++LN KKPL+ D + + + ++++A+Q+ Y+ ++ +AN+I T +GGTH+ G
Sbjct: 233 VKYLNQSKKPLYPDPIYLETEGEEGSLEVAIQY-HQGYNSSIFSFANNINTKEGGTHLSG 291
Query: 366 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 425
K+++TRT N +K +KD D + G+ +REG+T IISV++ +P+FEGQTKT+LGN E
Sbjct: 292 FKSAITRTFNDYARKKNILKDSDDNFKGQDIREGMTAIISVKLADPQFEGQTKTKLGNSE 351
Query: 426 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 485
+R VD +V +L +LE +P + I+ K+LSA +A AA++ARDL R+KS L S++LP
Sbjct: 352 MRGFVDSAVSSFLKTFLEENPKIAKVIVDKALSAARARKAARKARDLTRRKSALTSTALP 411
Query: 486 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
GKLADC+ +++E++IVEGDSAGGSAKQGR+R FQ I+ PL+ I
Sbjct: 412 GKLADCAKRQAKDTEVYIVEGDSAGGSAKQGRNREFQAIL-PLKGKIL 458
>gi|419657801|ref|ZP_14188449.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 1997-1]
gi|380634349|gb|EIB52236.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 1997-1]
Length = 769
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/466 (47%), Positives = 311/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I+V
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK V+ + ++ GT I FWPD Q+
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVVSEFGV----IGKSEKTGTTIEFWPDDQI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LNPK+TI + D ++ + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYEILAKRFRELAYLNPKITINFK----DNRVGKHESFHFEGGISQFVTDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKAIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++G+ VREGL I+SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDNKITGDDVREGLIAIVSVKVPEPQFEGQTKGKLGSTYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYLT+Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|23978233|dbj|BAC21112.1| DNA gyrase B subunit [Anabaenopsis circularis NIES-21]
Length = 398
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 233/403 (57%), Positives = 298/403 (73%), Gaps = 11/403 (2%)
Query: 102 TGPRGLHHLVY--EILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNK 159
TGPRGLHHLVY E++DN+VDEA AGY ++IE+ + AD SVSV D+GRGIP D H T K
Sbjct: 1 TGPRGLHHLVYVYEVVDNSVDEALAGYCTHIEIEINADGSVSVTDDGRGIPTDTHSRTGK 60
Query: 160 SALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYS 219
SALETV+TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD + Q+Y
Sbjct: 61 SALETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEVVEVTVWRDKKVHTQRYE 118
Query: 220 RGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLT 279
RG PVT L + R GT + F PD Q+FTT I+FD+ T+AGR+RELA+LN +
Sbjct: 119 RGVPVTELVAKPY---KEARTGTSVTFKPDTQIFTTGIEFDYITLAGRLRELAYLNAGVK 175
Query: 280 IAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 335
I R E + + Y + GG++EY+ ++N DK+PLH+ ++ + + + I++A
Sbjct: 176 ITFTDNRLELIKSDTPKVETYEYKGGIKEYIAYMNRDKQPLHEEIIYVQGERSNVQIEVA 235
Query: 336 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 395
LQWC+DAY+D +LG+AN+IRT+DGGTH+EG+KA LTRTLN++ +K +K+ + +LSGEH
Sbjct: 236 LQWCTDAYTDNVLGFANNIRTVDGGTHLEGLKAVLTRTLNAIARKRNKIKENEPNLSGEH 295
Query: 396 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 455
VREGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE HP + DSIL K
Sbjct: 296 VREGLTAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFHPGIADSILDK 355
Query: 456 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEE 498
++ A KAA AA+ AR+LVR+KSVL SS LPGKLADCSS P E
Sbjct: 356 AIQAFKAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPGE 398
>gi|357637398|ref|ZP_09135273.1| DNA gyrase, B subunit [Streptococcus macacae NCTC 11558]
gi|357585852|gb|EHJ53055.1| DNA gyrase, B subunit [Streptococcus macacae NCTC 11558]
Length = 650
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 232/467 (49%), Positives = 323/467 (69%), Gaps = 11/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA AG+AS+I+V
Sbjct: 11 VAQEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALAGFASHIQV 70
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V D+GRGIP+D+ T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 71 FIEKDNSITVIDDGRGIPVDIQKKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVG 128
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
SVVNALS L+V V+++G Y Q+Y RG V L +D D GT + F PD +
Sbjct: 129 SSVVNALSTQLDVRVYKNGKVYFQEYRRGVVVNDLKV----IDETDITGTTVHFTPDPDI 184
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FT I+FD + +A RI+ELAFLN L I++ + D E+N+ EY + GG+ YV ++N
Sbjct: 185 FTETIEFDFDKLAKRIQELAFLNKGLKISITDKRKDKEQNK--EYHYEGGIVSYVDFINE 242
Query: 313 DKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K+ + + + +++GI +++A+Q+ + Y + ++ +AN+I T +GGTH +G + +LT
Sbjct: 243 NKEVIFENPIYTDGELEGIAVEVAMQYTT-GYHEIIMSFANNIHTHEGGTHEQGFRTALT 301
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R +N KK+K +K+ D +LSGE VREGLT +ISV+ PNP+FEGQTKT+LGN EV K+ +
Sbjct: 302 RVINDYAKKNKILKENDDNLSGEDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVVKITN 361
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+ E L +L +P + I+ K + A KA +AAKRAR++ R+KS L S+LPGKLADC
Sbjct: 362 RLFSEALNRFLLENPPIAKKIVEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLADC 421
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SS P ++E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 422 SSNDPIQNELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 467
>gi|238061919|ref|ZP_04606628.1| DNA gyrase B subunit gyrB [Micromonospora sp. ATCC 39149]
gi|237883730|gb|EEP72558.1| DNA gyrase B subunit gyrB [Micromonospora sp. ATCC 39149]
Length = 648
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/468 (50%), Positives = 320/468 (68%), Gaps = 15/468 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ YG+E I VLEGLEAVRKRP MYIGSTG RGLHHLV+E++DNAVDEA AG+ I+V L
Sbjct: 7 QEYGAESITVLEGLEAVRKRPGMYIGSTGERGLHHLVWEVVDNAVDEALAGHCDTIDVVL 66
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
LAD V V DNGRG P+DLHP K +E LTVLHAGGKF G + Y+VSGGLHGVG+S
Sbjct: 67 LADGGVRVTDNGRGFPVDLHPKLKKPGVEVALTVLHAGGKFDGKA--YAVSGGLHGVGVS 124
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS + V + + G + Q+Y+ KP + ++ DR G+ + FWPD VF
Sbjct: 125 VVNALSTRMAVEIHKSGFVWRQQYANSKP-----SPLEKGEATDRTGSAVTFWPDADVFE 179
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKED-SDPEKNQYNE--YFFAGGLEEYVQWLN 311
T + FD TI R++E+AFLN LTI L E S+ E+ + E + + GG+ ++V+ LN
Sbjct: 180 T-VNFDFQTIYRRLQEMAFLNRGLTIHLLDERVSEGEEGKPREVTFCYKGGIADFVRHLN 238
Query: 312 TDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 370
K P+H VV F + +G+++++A+QW +++Y +++ +AN+I T +GGTH EG +A+L
Sbjct: 239 ASKNPIHKTVVEFGAEEEGMSVEIAMQW-NESYGESVYTFANTINTHEGGTHEEGFRAAL 297
Query: 371 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
T +N G K +K D LSGE +REGL IISV++ NP+FEGQTKT+LGN V+ V
Sbjct: 298 TSVVNRYGADKKLLKG-DEKLSGEDIREGLAAIISVKLANPQFEGQTKTKLGNTPVKSFV 356
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
+ E+L ++ + +P I++K+ A +A +AA++AR L R+KS+L S S+PGKLAD
Sbjct: 357 QRVCNEWLVDWFDRNPAEAKIIITKASQAARARIAAQQARKLARRKSLLESGSMPGKLAD 416
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
C ST P ESE+FIVEGDSAGGSAKQGRD R Q I+ P++ I A
Sbjct: 417 CQSTDPRESEVFIVEGDSAGGSAKQGRDPRTQAIL-PIRGKILNVEKA 463
>gi|299147112|ref|ZP_07040179.1| DNA gyrase, B subunit [Bacteroides sp. 3_1_23]
gi|298514997|gb|EFI38879.1| DNA gyrase, B subunit [Bacteroides sp. 3_1_23]
Length = 652
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/470 (48%), Positives = 312/470 (66%), Gaps = 12/470 (2%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
P + +Y ++ IQVLEGLEAVRKRPAMYIG +GLHHLVYEI+DN++DEA AGY +IE
Sbjct: 8 PNNGSYSADSIQVLEGLEAVRKRPAMYIGDISVKGLHHLVYEIVDNSIDEALAGYCDHIE 67
Query: 132 VALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 191
V + DNS++V DNGRGIP+D H KSALE +TVLHAGGKF S Y VSGGLHGV
Sbjct: 68 VIINEDNSITVQDNGRGIPVDYHEKEKKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGV 125
Query: 192 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 251
G+S VNALS + V+R+G Y Q+Y GKP+ + V V + D GTR +FWPD
Sbjct: 126 GMSCVNALSTHMTTQVFRNGKIYQQEYEIGKPLYS----VKEVGTADITGTRQQFWPDNT 181
Query: 252 VFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYN--EYFFAGGLEEYVQW 309
+FT + +D+ +A R+RELA+LN L I+L E + +++ GL E+V++
Sbjct: 182 IFTETV-YDYKILASRLRELAYLNAGLRISLTDRRVVNEDGSFKGEQFYSEEGLREFVRF 240
Query: 310 LNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+ + ++ L +DV+ + GI I++A+ + + +S+ + Y N+I TI+GGTH+ G +
Sbjct: 241 IESSREHLINDVIYLNSEKQGIPIEVAIMYNT-GFSENVHSYVNNINTIEGGTHLAGFRR 299
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
+LTRTL + SK ++ + +SG+ REGLT +ISV+V P+FEGQTKT+LGN EV
Sbjct: 300 ALTRTLKKYAEDSKMLEKVKVEISGDDFREGLTAVISVKVQEPQFEGQTKTKLGNNEVMG 359
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
VDQ+V E L YLE HP +I+ K + A A AA++AR++V++KS + LPGKL
Sbjct: 360 AVDQAVGEVLAYYLEEHPKEAKTIVDKVILAATARHAARKAREMVQRKSPMSGGGLPGKL 419
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
ADCS + E+F+VEGDSAGG+AKQGR+R FQ I+ PL+ I A
Sbjct: 420 ADCSDKDATKCELFLVEGDSAGGTAKQGRNRMFQAIL-PLRGKILNVEKA 468
>gi|304383575|ref|ZP_07366034.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella marshii
DSM 16973]
gi|304335099|gb|EFM01370.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella marshii
DSM 16973]
Length = 657
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 234/477 (49%), Positives = 316/477 (66%), Gaps = 19/477 (3%)
Query: 63 IATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEA 122
+A KEN Y + IQVLEGLEAVRKRPAMYIG +GLHHLV E +DN++DEA
Sbjct: 1 MAENQTKEN----NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLVNETVDNSIDEA 56
Query: 123 QAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGY 182
AG+ NIEV + DNS++V D+GRGIP+D H +KSALE V+TVLHAGGKF S Y
Sbjct: 57 MAGFCKNIEVIINEDNSITVQDDGRGIPVDEHEKLHKSALEVVMTVLHAGGKFDKGS--Y 114
Query: 183 SVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGT 242
VSGGLHGVG+S VNALS + V+RDG Y Q+Y +GKP+ + V + +R+GT
Sbjct: 115 KVSGGLHGVGVSCVNALSSHMLSQVFRDGKIYQQEYEKGKPLYPVKV----VGTTERRGT 170
Query: 243 RIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-G 301
R +FWPD +FTT ++ + IA R+RELA+LN + I L+ D E E F A
Sbjct: 171 RQQFWPDATIFTTT-KYKWDIIANRMRELAYLNAGIKITLKDMRPDEEGKLREETFHAED 229
Query: 302 GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGG 360
GL+E+V++++ + L DV+ + + GI I++A+ + +D YS+ + Y N+I TI+GG
Sbjct: 230 GLKEFVRYVDRHRTHLFDDVIYLKTEKQGIPIEVAVMYNND-YSENIHSYVNNINTIEGG 288
Query: 361 THIEGVKASLTRTLNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQ 416
TH+ G + +LTRTL + SK ++ I ++GE REGLT +IS++V P+FEGQ
Sbjct: 289 THLTGFRMALTRTLKTYADADPVISKQIEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQ 348
Query: 417 TKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQK 476
TKT+LGN EV V Q+V E L+ YLE HP I K + A A +AA++AR+ V++K
Sbjct: 349 TKTKLGNSEVSGAVQQAVGEALSNYLEEHPKEAKLICDKVVLAATARIAARKARESVQRK 408
Query: 477 SVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
+V+ LPGKLADCS+ P++ EIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 409 NVMSGGGLPGKLADCSNRDPKKCEIFLVEGDSAGGSAKQGRDRYTQAIL-PLKGKIL 464
>gi|225874303|ref|YP_002755762.1| DNA gyrase subunit B [Acidobacterium capsulatum ATCC 51196]
gi|225791292|gb|ACO31382.1| DNA gyrase, B subunit [Acidobacterium capsulatum ATCC 51196]
Length = 870
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/473 (50%), Positives = 326/473 (68%), Gaps = 23/473 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
TY S+ I+VLEGLEAVR RPAMYIGSTG GLHHLVYE++DN+VDEA AGYA+ IEV +
Sbjct: 22 TYTSDNIKVLEGLEAVRLRPAMYIGSTGEMGLHHLVYEVVDNSVDEALAGYATRIEVTIH 81
Query: 136 ADNSVSVADNGRGIPID---LHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
DNS++V D+GRGIP+D L A++ VLT LHAGGKF SS Y VSGGLHGVG
Sbjct: 82 VDNSITVVDDGRGIPVDEKTLDNGEKMPAVQVVLTKLHAGGKF--DSSTYKVSGGLHGVG 139
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+S VNALSE +V +WRDG + Q Y+RG P++ L + ++GT++ F PDK +
Sbjct: 140 VSCVNALSEEFDVEIWRDGHTWEQDYARGIPISKLR----QAGTSKKRGTKVHFLPDKSI 195
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE-DSDPEKNQ--YNEYFFAGGLEEYVQW 309
FT +++++T+A R+RELAFLN L I L E +DP+ Q N++ +AGG+ E+++
Sbjct: 196 FTVT-EYNYDTLAQRLRELAFLNKGLEIVLVDERTADPKTGQPKRNDFKYAGGIAEFIKH 254
Query: 310 LNTDKKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 365
+N K+ LHD + G R +VD +++ALQ+ +D+YS+T+ +AN+I T DGGTH+ G
Sbjct: 255 INKGKQILHDKPIVMEGLRDNVD---MEIALQY-NDSYSETVFCFANNINTADGGTHLSG 310
Query: 366 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 425
K +LTRT+NS G++ KD +LSG+ VREGL +ISV++P P+FEGQTK +L N +
Sbjct: 311 FKTALTRTINSAGQQLGLFKDVKENLSGDDVREGLVAVISVKLPQPQFEGQTKGKL-NSD 369
Query: 426 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 485
+ V V E L +LE +P V I++K++ A +A AA++ARDL R+K L LP
Sbjct: 370 IAGTVQALVNEKLGMFLEQNPPVAKRIINKAIEAARAREAARKARDLTRRKGALDGGGLP 429
Query: 486 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
GKLADCS P+ E+++VEG+SAGG+AKQGRDRRFQ I+ PL+ I A
Sbjct: 430 GKLADCSERQPDRCELYLVEGESAGGTAKQGRDRRFQAIL-PLKGKILNVEKA 481
>gi|227518104|ref|ZP_03948153.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis TX0104]
gi|227555689|ref|ZP_03985736.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis HH22]
gi|229547125|ref|ZP_04435850.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis TX1322]
gi|229550695|ref|ZP_04439420.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis ATCC
29200]
gi|255974526|ref|ZP_05425112.1| subunit B [Enterococcus faecalis T2]
gi|256618523|ref|ZP_05475369.1| DNA gyrase subunit B [Enterococcus faecalis ATCC 4200]
gi|256761858|ref|ZP_05502438.1| hypothetical protein EFCG_02340 [Enterococcus faecalis T3]
gi|256854985|ref|ZP_05560346.1| hypothetical protein EFYG_02228 [Enterococcus faecalis T8]
gi|256957011|ref|ZP_05561182.1| DNA gyrase subunit B [Enterococcus faecalis DS5]
gi|256960820|ref|ZP_05564991.1| hypothetical protein EFGG_02710 [Enterococcus faecalis Merz96]
gi|256963987|ref|ZP_05568158.1| hypothetical protein EFHG_02347 [Enterococcus faecalis HIP11704]
gi|257078688|ref|ZP_05573049.1| hypothetical protein EFIG_02258 [Enterococcus faecalis JH1]
gi|257081351|ref|ZP_05575712.1| DNA gyrase subunit B [Enterococcus faecalis E1Sol]
gi|257084008|ref|ZP_05578369.1| DNA gyrase subunit B [Enterococcus faecalis Fly1]
gi|257087838|ref|ZP_05582199.1| DNA gyrase subunit B [Enterococcus faecalis D6]
gi|257088490|ref|ZP_05582851.1| DNA gyrase B subunit gyrB [Enterococcus faecalis CH188]
gi|257417430|ref|ZP_05594424.1| DNA gyrase subunit B [Enterococcus faecalis ARO1/DG]
gi|257421347|ref|ZP_05598337.1| DNA gyrase subunit B gyrB [Enterococcus faecalis X98]
gi|293382658|ref|ZP_06628586.1| DNA gyrase, B subunit [Enterococcus faecalis R712]
gi|293387930|ref|ZP_06632466.1| DNA gyrase, B subunit [Enterococcus faecalis S613]
gi|294781253|ref|ZP_06746600.1| DNA gyrase, B subunit [Enterococcus faecalis PC1.1]
gi|307268921|ref|ZP_07550285.1| DNA gyrase, B subunit [Enterococcus faecalis TX4248]
gi|307274016|ref|ZP_07555226.1| DNA gyrase, B subunit [Enterococcus faecalis TX0855]
gi|307276495|ref|ZP_07557615.1| DNA gyrase, B subunit [Enterococcus faecalis TX2134]
gi|307284063|ref|ZP_07564233.1| DNA gyrase, B subunit [Enterococcus faecalis TX0860]
gi|307287177|ref|ZP_07567248.1| DNA gyrase, B subunit [Enterococcus faecalis TX0109]
gi|307296594|ref|ZP_07576414.1| DNA gyrase, B subunit [Enterococcus faecalis TX0411]
gi|312901292|ref|ZP_07760575.1| DNA gyrase, B subunit [Enterococcus faecalis TX0470]
gi|312903111|ref|ZP_07762292.1| DNA gyrase, B subunit [Enterococcus faecalis TX0635]
gi|312908810|ref|ZP_07767749.1| DNA gyrase, B subunit [Enterococcus faecalis DAPTO 512]
gi|312951716|ref|ZP_07770610.1| DNA gyrase, B subunit [Enterococcus faecalis TX0102]
gi|312979548|ref|ZP_07791230.1| DNA gyrase, B subunit [Enterococcus faecalis DAPTO 516]
gi|384511969|ref|YP_005707062.1| DNA topoisomerase subunit B [Enterococcus faecalis OG1RF]
gi|384517111|ref|YP_005704416.1| DNA gyrase subunit B [Enterococcus faecalis 62]
gi|397698588|ref|YP_006536376.1| DNA gyrase, B subunit [Enterococcus faecalis D32]
gi|421514187|ref|ZP_15960879.1| DNA gyrase subunit B [Enterococcus faecalis ATCC 29212]
gi|422685146|ref|ZP_16743370.1| DNA gyrase, B subunit [Enterococcus faecalis TX4000]
gi|422688143|ref|ZP_16746303.1| DNA gyrase, B subunit [Enterococcus faecalis TX0630]
gi|422691568|ref|ZP_16749602.1| DNA gyrase, B subunit [Enterococcus faecalis TX0031]
gi|422694316|ref|ZP_16752309.1| DNA gyrase, B subunit [Enterococcus faecalis TX4244]
gi|422697302|ref|ZP_16755247.1| DNA gyrase, B subunit [Enterococcus faecalis TX1346]
gi|422701013|ref|ZP_16758855.1| DNA gyrase, B subunit [Enterococcus faecalis TX1342]
gi|422702817|ref|ZP_16760646.1| DNA gyrase, B subunit [Enterococcus faecalis TX1302]
gi|422707514|ref|ZP_16765207.1| DNA gyrase, B subunit [Enterococcus faecalis TX0043]
gi|422709081|ref|ZP_16766595.1| DNA gyrase, B subunit [Enterococcus faecalis TX0027]
gi|422713181|ref|ZP_16769937.1| DNA gyrase, B subunit [Enterococcus faecalis TX0309A]
gi|422717804|ref|ZP_16774478.1| DNA gyrase, B subunit [Enterococcus faecalis TX0309B]
gi|422719193|ref|ZP_16775841.1| DNA gyrase, B subunit [Enterococcus faecalis TX0017]
gi|422723320|ref|ZP_16779858.1| DNA gyrase, B subunit [Enterococcus faecalis TX2137]
gi|422726393|ref|ZP_16782841.1| DNA gyrase, B subunit [Enterococcus faecalis TX0312]
gi|422728188|ref|ZP_16784606.1| DNA gyrase, B subunit [Enterococcus faecalis TX0012]
gi|422730566|ref|ZP_16786955.1| DNA gyrase, B subunit [Enterococcus faecalis TX0645]
gi|422734914|ref|ZP_16791194.1| DNA gyrase, B subunit [Enterococcus faecalis TX1341]
gi|422741701|ref|ZP_16795724.1| DNA gyrase, B subunit [Enterococcus faecalis TX2141]
gi|422868246|ref|ZP_16914793.1| DNA gyrase, B subunit [Enterococcus faecalis TX1467]
gi|424671212|ref|ZP_18108224.1| DNA gyrase, B subunit [Enterococcus faecalis 599]
gi|424683876|ref|ZP_18120621.1| DNA gyrase, B subunit [Enterococcus faecalis ERV129]
gi|424685955|ref|ZP_18122632.1| DNA gyrase, B subunit [Enterococcus faecalis ERV25]
gi|424689103|ref|ZP_18125694.1| DNA gyrase, B subunit [Enterococcus faecalis ERV31]
gi|424692845|ref|ZP_18129320.1| DNA gyrase, B subunit [Enterococcus faecalis ERV37]
gi|424696423|ref|ZP_18132774.1| DNA gyrase, B subunit [Enterococcus faecalis ERV41]
gi|424699254|ref|ZP_18135482.1| DNA gyrase, B subunit [Enterococcus faecalis ERV62]
gi|424704132|ref|ZP_18140238.1| DNA gyrase, B subunit [Enterococcus faecalis ERV63]
gi|424707526|ref|ZP_18143505.1| DNA gyrase, B subunit [Enterococcus faecalis ERV65]
gi|424716672|ref|ZP_18145975.1| DNA gyrase, B subunit [Enterococcus faecalis ERV68]
gi|424719090|ref|ZP_18148314.1| DNA gyrase, B subunit [Enterococcus faecalis ERV72]
gi|424722657|ref|ZP_18151696.1| DNA gyrase, B subunit [Enterococcus faecalis ERV73]
gi|424726151|ref|ZP_18154831.1| DNA gyrase, B subunit [Enterococcus faecalis ERV81]
gi|424734721|ref|ZP_18163210.1| DNA gyrase, B subunit [Enterococcus faecalis ERV85]
gi|424749321|ref|ZP_18177433.1| DNA gyrase, B subunit [Enterococcus faecalis ERV93]
gi|424757653|ref|ZP_18185389.1| DNA gyrase, B subunit [Enterococcus faecalis R508]
gi|430362672|ref|ZP_19427149.1| DNA gyrase, B subunit [Enterococcus faecalis OG1X]
gi|430367112|ref|ZP_19427775.1| DNA gyrase, B subunit [Enterococcus faecalis M7]
gi|15982567|dbj|BAB69478.1| DNA gyrase B subunit [Enterococcus faecalis]
gi|227074438|gb|EEI12401.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis TX0104]
gi|227175199|gb|EEI56171.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis HH22]
gi|229304128|gb|EEN70124.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis ATCC
29200]
gi|229307707|gb|EEN73694.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis TX1322]
gi|255967398|gb|EET98020.1| subunit B [Enterococcus faecalis T2]
gi|256598050|gb|EEU17226.1| DNA gyrase subunit B [Enterococcus faecalis ATCC 4200]
gi|256683109|gb|EEU22804.1| hypothetical protein EFCG_02340 [Enterococcus faecalis T3]
gi|256709498|gb|EEU24545.1| hypothetical protein EFYG_02228 [Enterococcus faecalis T8]
gi|256947507|gb|EEU64139.1| DNA gyrase subunit B [Enterococcus faecalis DS5]
gi|256951316|gb|EEU67948.1| hypothetical protein EFGG_02710 [Enterococcus faecalis Merz96]
gi|256954483|gb|EEU71115.1| hypothetical protein EFHG_02347 [Enterococcus faecalis HIP11704]
gi|256986718|gb|EEU74020.1| hypothetical protein EFIG_02258 [Enterococcus faecalis JH1]
gi|256989381|gb|EEU76683.1| DNA gyrase subunit B [Enterococcus faecalis E1Sol]
gi|256992038|gb|EEU79340.1| DNA gyrase subunit B [Enterococcus faecalis Fly1]
gi|256995868|gb|EEU83170.1| DNA gyrase subunit B [Enterococcus faecalis D6]
gi|256997302|gb|EEU83822.1| DNA gyrase B subunit gyrB [Enterococcus faecalis CH188]
gi|257159258|gb|EEU89218.1| DNA gyrase subunit B [Enterococcus faecalis ARO1/DG]
gi|257163171|gb|EEU93131.1| DNA gyrase subunit B gyrB [Enterococcus faecalis X98]
gi|291079964|gb|EFE17328.1| DNA gyrase, B subunit [Enterococcus faecalis R712]
gi|291082667|gb|EFE19630.1| DNA gyrase, B subunit [Enterococcus faecalis S613]
gi|294451716|gb|EFG20171.1| DNA gyrase, B subunit [Enterococcus faecalis PC1.1]
gi|295112344|emb|CBL30981.1| DNA gyrase subunit B [Enterococcus sp. 7L76]
gi|306495930|gb|EFM65518.1| DNA gyrase, B subunit [Enterococcus faecalis TX0411]
gi|306501775|gb|EFM71066.1| DNA gyrase, B subunit [Enterococcus faecalis TX0109]
gi|306503434|gb|EFM72683.1| DNA gyrase, B subunit [Enterococcus faecalis TX0860]
gi|306506822|gb|EFM75972.1| DNA gyrase, B subunit [Enterococcus faecalis TX2134]
gi|306509324|gb|EFM78384.1| DNA gyrase, B subunit [Enterococcus faecalis TX0855]
gi|306514729|gb|EFM83280.1| DNA gyrase, B subunit [Enterococcus faecalis TX4248]
gi|310625248|gb|EFQ08531.1| DNA gyrase, B subunit [Enterococcus faecalis DAPTO 512]
gi|310630289|gb|EFQ13572.1| DNA gyrase, B subunit [Enterococcus faecalis TX0102]
gi|310633502|gb|EFQ16785.1| DNA gyrase, B subunit [Enterococcus faecalis TX0635]
gi|311287730|gb|EFQ66286.1| DNA gyrase, B subunit [Enterococcus faecalis DAPTO 516]
gi|311291669|gb|EFQ70225.1| DNA gyrase, B subunit [Enterococcus faecalis TX0470]
gi|315026673|gb|EFT38605.1| DNA gyrase, B subunit [Enterococcus faecalis TX2137]
gi|315030118|gb|EFT42050.1| DNA gyrase, B subunit [Enterococcus faecalis TX4000]
gi|315033552|gb|EFT45484.1| DNA gyrase, B subunit [Enterococcus faecalis TX0017]
gi|315036375|gb|EFT48307.1| DNA gyrase, B subunit [Enterococcus faecalis TX0027]
gi|315143591|gb|EFT87607.1| DNA gyrase, B subunit [Enterococcus faecalis TX2141]
gi|315148271|gb|EFT92287.1| DNA gyrase, B subunit [Enterococcus faecalis TX4244]
gi|315151295|gb|EFT95311.1| DNA gyrase, B subunit [Enterococcus faecalis TX0012]
gi|315153721|gb|EFT97737.1| DNA gyrase, B subunit [Enterococcus faecalis TX0031]
gi|315155119|gb|EFT99135.1| DNA gyrase, B subunit [Enterococcus faecalis TX0043]
gi|315158751|gb|EFU02768.1| DNA gyrase, B subunit [Enterococcus faecalis TX0312]
gi|315163335|gb|EFU07352.1| DNA gyrase, B subunit [Enterococcus faecalis TX0645]
gi|315165723|gb|EFU09740.1| DNA gyrase, B subunit [Enterococcus faecalis TX1302]
gi|315168224|gb|EFU12241.1| DNA gyrase, B subunit [Enterococcus faecalis TX1341]
gi|315170508|gb|EFU14525.1| DNA gyrase, B subunit [Enterococcus faecalis TX1342]
gi|315174178|gb|EFU18195.1| DNA gyrase, B subunit [Enterococcus faecalis TX1346]
gi|315573987|gb|EFU86178.1| DNA gyrase, B subunit [Enterococcus faecalis TX0309B]
gi|315578843|gb|EFU91034.1| DNA gyrase, B subunit [Enterococcus faecalis TX0630]
gi|315581938|gb|EFU94129.1| DNA gyrase, B subunit [Enterococcus faecalis TX0309A]
gi|323479244|gb|ADX78683.1| DNA gyrase, B subunit [Enterococcus faecalis 62]
gi|327533858|gb|AEA92692.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus
faecalis OG1RF]
gi|329576322|gb|EGG57837.1| DNA gyrase, B subunit [Enterococcus faecalis TX1467]
gi|397335227|gb|AFO42899.1| DNA gyrase, B subunit [Enterococcus faecalis D32]
gi|401672707|gb|EJS79173.1| DNA gyrase subunit B [Enterococcus faecalis ATCC 29212]
gi|402359313|gb|EJU93949.1| DNA gyrase, B subunit [Enterococcus faecalis 599]
gi|402363750|gb|EJU98209.1| DNA gyrase, B subunit [Enterococcus faecalis ERV129]
gi|402368565|gb|EJV02877.1| DNA gyrase, B subunit [Enterococcus faecalis ERV25]
gi|402369341|gb|EJV03626.1| DNA gyrase, B subunit [Enterococcus faecalis ERV31]
gi|402376725|gb|EJV10651.1| DNA gyrase, B subunit [Enterococcus faecalis ERV37]
gi|402376743|gb|EJV10666.1| DNA gyrase, B subunit [Enterococcus faecalis ERV62]
gi|402377901|gb|EJV11789.1| DNA gyrase, B subunit [Enterococcus faecalis ERV41]
gi|402382703|gb|EJV16353.1| DNA gyrase, B subunit [Enterococcus faecalis ERV63]
gi|402384310|gb|EJV17868.1| DNA gyrase, B subunit [Enterococcus faecalis ERV65]
gi|402387286|gb|EJV20771.1| DNA gyrase, B subunit [Enterococcus faecalis ERV68]
gi|402397208|gb|EJV30238.1| DNA gyrase, B subunit [Enterococcus faecalis ERV72]
gi|402400529|gb|EJV33351.1| DNA gyrase, B subunit [Enterococcus faecalis ERV81]
gi|402401442|gb|EJV34216.1| DNA gyrase, B subunit [Enterococcus faecalis ERV73]
gi|402406399|gb|EJV38956.1| DNA gyrase, B subunit [Enterococcus faecalis ERV85]
gi|402406469|gb|EJV39020.1| DNA gyrase, B subunit [Enterococcus faecalis R508]
gi|402407982|gb|EJV40478.1| DNA gyrase, B subunit [Enterococcus faecalis ERV93]
gi|429511943|gb|ELA01563.1| DNA gyrase, B subunit [Enterococcus faecalis OG1X]
gi|429516769|gb|ELA06246.1| DNA gyrase, B subunit [Enterococcus faecalis M7]
Length = 649
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/470 (50%), Positives = 320/470 (68%), Gaps = 19/470 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DEA AG+A +I+V
Sbjct: 12 AQEYDASQIQVLEGLEAVRKRPGMYIGSTSGEGLHHLVWEIVDNSIDEALAGFAKSIQVI 71
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ D+S++V D+GRGIP+ + T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 72 IEPDDSITVIDDGRGIPVGIQAKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGS 129
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS SL+V V++DG Y+Q+Y RG V L ++ DR GT + F PD ++F
Sbjct: 130 SVVNALSTSLDVRVYKDGKVYYQEYRRGAVVDDLKV----IEETDRHGTTVHFIPDPEIF 185
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +D + +A R+RELAFLN L I++ ED + EY + GG++ YV+ LN +
Sbjct: 186 TETTVYDFDKLATRVRELAFLNRGLHISI--EDRREGQEDKKEYHYEGGIKSYVEHLNAN 243
Query: 314 K-----KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
K +P+ + G ++D IT+++++Q+ +D Y +L +AN+I T +GGTH G K
Sbjct: 244 KDVIFPEPIF-IEGEQQD---ITVEVSMQY-TDGYHSNILSFANNIHTYEGGTHESGFKT 298
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
SLTR +N +K K +K+ D L+GE VREGLT ++S++ P+P+FEGQTKT+LGN EVR
Sbjct: 299 SLTRVINDYARKQKLMKENDEKLTGEDVREGLTAVVSIKHPDPQFEGQTKTKLGNSEVRT 358
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
V D+ EY T++L +P V I+ K + A KA LAAKRAR++ R+K L S+LPGKL
Sbjct: 359 VTDRLFSEYFTKFLMENPTVGKQIVEKGMLASKARLAAKRAREVTRRKGALEISNLPGKL 418
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
ADCSS PE+ E+FIVEGDSAGGSAKQGR R FQ I+ P++ I A
Sbjct: 419 ADCSSKDPEKCELFIVEGDSAGGSAKQGRSREFQAIL-PIRGKILNVEKA 467
>gi|218131840|ref|ZP_03460644.1| hypothetical protein BACEGG_03461 [Bacteroides eggerthii DSM 20697]
gi|317474545|ref|ZP_07933819.1| DNA gyrase, subunit B [Bacteroides eggerthii 1_2_48FAA]
gi|217986143|gb|EEC52482.1| DNA gyrase, B subunit [Bacteroides eggerthii DSM 20697]
gi|316909226|gb|EFV30906.1| DNA gyrase, subunit B [Bacteroides eggerthii 1_2_48FAA]
Length = 653
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/466 (47%), Positives = 312/466 (66%), Gaps = 12/466 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHLVYE++DN++DEA AGY +IEV +
Sbjct: 12 NYSASNIQVLEGLEAVRKRPAMYIGDISIKGLHHLVYEVVDNSIDEALAGYCDHIEVTIN 71
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+D H KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 72 EDNSITVQDNGRGIPVDFHEKEQKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 129
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS + V+R+G Y Q+Y G P+ + V V + GTR +FWPD +FT
Sbjct: 130 VNALSTHMTTQVFRNGKIYQQEYECGHPLYS----VKEVGVTEITGTRQQFWPDDTIFTE 185
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTD 313
+ ++++ +A R+RELA+LN + I L E Y + F GL+E+V+++++
Sbjct: 186 TV-YNYDILATRMRELAYLNAGIKITLTDLRVKEEDGNYKQEIFYSVEGLKEFVRYIDSS 244
Query: 314 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
++ L +DV+ + G +++A+ + + +Y++ + Y N+I TI+GGTH+ G + +LTR
Sbjct: 245 REHLVNDVIYINTEKQGTPVEVAIMYNT-SYNENIHSYVNNINTIEGGTHLAGFRRALTR 303
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
TL + +K ++ + +SG+ REGLT +IS++V P+FEGQTKT+LGN EV VDQ
Sbjct: 304 TLKKYAEDNKMLEKAKVEISGDDFREGLTAVISIKVAEPQFEGQTKTKLGNNEVMGAVDQ 363
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+V E L+ YLE HP I+ K + A +A +AA++AR+ V++KS + +PGKLADCS
Sbjct: 364 AVGEALSYYLEEHPKESKMIVDKVILAAQARVAARKARESVQRKSPMSGGGMPGKLADCS 423
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PEE E+F+VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 424 SKDPEECELFLVEGDSAGGSAKQGRNRTFQAIL-PLRGKILNVEKA 468
>gi|157414325|ref|YP_001481581.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 81116]
gi|157385289|gb|ABV51604.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 81116]
Length = 769
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/466 (46%), Positives = 310/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I+V
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD Q+
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGV----IGKSKKTGTTIEFWPDDQI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LNPK+TI + D ++ + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYEILAKRFRELAYLNPKITINFK----DNRVGKHESFHFEGGISQFVTDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKAIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++GE VREGL ++SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDNKITGEDVREGLIAVVSVKVPEPQFEGQTKGKLGSTYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYLT+Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|157363918|ref|YP_001470685.1| DNA gyrase subunit B [Thermotoga lettingae TMO]
gi|157314522|gb|ABV33621.1| DNA gyrase, B subunit [Thermotoga lettingae TMO]
Length = 630
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/461 (49%), Positives = 309/461 (67%), Gaps = 21/461 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +E I++L+GLEAVR RP MYIGSTG GLHHLVYEI+DN++DE AG+ + I V L
Sbjct: 4 YKAESIRILKGLEAVRLRPGMYIGSTGKSGLHHLVYEIVDNSIDEVMAGFCNTIRVTLFE 63
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DN+V + DNGRGIP+D HP T +SALE V+T LHAGGKF S + Y VSGGLHGVG SVV
Sbjct: 64 DNTVEIEDNGRGIPVDTHPETGRSALEVVMTTLHAGGKF--SKNIYKVSGGLHGVGASVV 121
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LEV + ++G Y+QKYSRG P C V + D+QGT +RF PD Q+F+
Sbjct: 122 NALSEILEVWIHKEGKIYYQKYSRGFP----QCEVTVIGETDKQGTIVRFKPDDQIFSI- 176
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEY----FFAGGLEEYVQWLNT 312
++FD + I ++RELAFLNP++ I ++ NEY + GGL EY ++L +
Sbjct: 177 LKFDPDLIENKLRELAFLNPQVKIIF--------EDLANEYTVTMHYEGGLREYARYLAS 228
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
+KP+H+ + ++D I + +A+ + + + YAN+IRTID GTH+ K + T+
Sbjct: 229 GRKPIHETIEVSGELDEIIVKIAIMYTDSYEEEKIYSYANNIRTIDHGTHVTAFKNTFTK 288
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LN + +K KD S SGE VREGL I++V + PEFEGQTK++LG+ V +
Sbjct: 289 MLNEYARSLGILK-KDESFSGEDVREGLIAIVTVLMKEPEFEGQTKSKLGSESAGIAVSR 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
++E L+EY E++ VL IL K L ++A AA++AR+L R+K+ + + SLPGKLADC
Sbjct: 348 ILKEKLSEYFEVNKQVLKVILEKVLKTMRAREAARKARELARRKNAMENLSLPGKLADCV 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
S+ E SE+FIVEGDSAGGSAKQ RDR +Q I+ PL+ I
Sbjct: 408 SSNVENSELFIVEGDSAGGSAKQARDREYQAIL-PLRGKIL 447
>gi|269925173|ref|YP_003321796.1| DNA gyrase subunit B [Thermobaculum terrenum ATCC BAA-798]
gi|269788833|gb|ACZ40974.1| DNA gyrase, B subunit [Thermobaculum terrenum ATCC BAA-798]
Length = 640
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/470 (50%), Positives = 316/470 (67%), Gaps = 14/470 (2%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E V Y +E IQVLEGLEAVRKRP MYIGST RGLHHL+YEI+DN+VDE+ AGY
Sbjct: 5 EEKVISNYNAESIQVLEGLEAVRKRPGMYIGSTDVRGLHHLIYEIVDNSVDESMAGYCDF 64
Query: 130 IEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 189
IEV + D SV+V DNGRGIP+ +HP KSALE V+TVLHAGGKFG S GY VSGGLH
Sbjct: 65 IEVHIHKDKSVTVRDNGRGIPVGIHPKLKKSALEVVMTVLHAGGKFG--SGGYKVSGGLH 122
Query: 190 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 249
GVG SVVNALSE L V R+G + Q Y RG P T + + DR GT I F PD
Sbjct: 123 GVGASVVNALSEYLIAEVHREGKIWRQSYERGVPKTPVEA----IGDTDRTGTIITFKPD 178
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 309
+F+T +++ +T+A R RE+A+LN L I + D E Y F GG+ +V+
Sbjct: 179 ADLFST-LEYQFDTLAQRFREIAYLNKGLKITFIDDRDDKELTLY----FEGGIASFVRH 233
Query: 310 LNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
LN ++ L + + K ++GI +++A+Q+ +D +++++ + N+I T+DGGTH+ G +
Sbjct: 234 LNKNRNVLTEKPIYIHKQLNGIDVEVAIQY-TDGFNESLHTFTNNINTVDGGTHLTGFRT 292
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
+LTRTLN K+ +KD D L+GE VREGLT ++SV++P+P+FEGQTK++LG+ E +
Sbjct: 293 ALTRTLNDYAVKNGLLKDSDTKLTGEDVREGLTAVVSVKLPDPQFEGQTKSKLGSSEAER 352
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
VV V++ L Y + +P I+ K+++A +A AA++ARDLV +K L +LPGKL
Sbjct: 353 VVASVVRDGLLSYFDENPSDAKRIIEKAITAARAREAARKARDLVVRKGALDGMTLPGKL 412
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
ADCS P SE++IVEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 413 ADCSERDPRHSELYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNVEKA 461
>gi|51891144|ref|YP_073835.1| DNA gyrase B subunit [Symbiobacterium thermophilum IAM 14863]
gi|51854833|dbj|BAD38991.1| DNA gyrase B subunit [Symbiobacterium thermophilum IAM 14863]
Length = 638
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 237/467 (50%), Positives = 325/467 (69%), Gaps = 15/467 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y EQIQVLEGLEAVR+RP MYIG T RGLHHL++EI+DNAVDE AG+ I V
Sbjct: 6 TEQYTGEQIQVLEGLEAVRRRPGMYIGGTSQRGLHHLIWEIIDNAVDERLAGFCDKIVVT 65
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
L +D SVSV+DNGRGIP+D+HP T S +ETV T+LHAGGKFGG + Y VSGGLHGVG
Sbjct: 66 LHSDGSVSVSDNGRGIPVDIHPKTGISTVETVYTMLHAGGKFGGGA--YKVSGGLHGVGA 123
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
+VVNALS L + V ++G Y +++ G TL D+K+ GT +RFWPD ++F
Sbjct: 124 AVVNALSRKLYIQVKQNGGVYEVEFANGGK--TLYPLRRVGDTKE-HGTYVRFWPDPEIF 180
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPE-KNQYNEYFFAGGLEEYVQWLNT 312
+ ++FD I R+R+ AFLN L I E + E + +YNE GL+ +VQ+LN
Sbjct: 181 ES-VEFDSEAIVTRLRDTAFLNQGLFIQFIDEKAGAEYRFKYNE-----GLQTFVQYLNR 234
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
++PLH + K D ++LA+Q+ +DAYS+ +L +AN+IRT++GGTH G+K +LT
Sbjct: 235 SREPLHAKPIYVFKATDTQEMELAIQY-TDAYSENILSFANNIRTVEGGTHETGLKTALT 293
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R +NS +K K +KD + +LSGE +REG+T I+SV++ P+FEGQTKT+LG+ E+ V
Sbjct: 294 RVINSYARKYKLLKDNEDNLSGEDIREGMTAILSVKLQEPQFEGQTKTKLGSSEMETFVA 353
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+V E L+++LE +P + I+ K+LSA +A AA++AR+LVR+KS L ++LPGKL DC
Sbjct: 354 AAVSEGLSDFLEENPAIAKRIVEKALSAARAREAARKARELVRRKSALEITALPGKLTDC 413
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
+S P ESE+F+VEGDSAGGSAK GRDRR Q ++ PL+ I A
Sbjct: 414 TSRDPSESELFLVEGDSAGGSAKMGRDRRIQAVL-PLRGKILNVEKA 459
>gi|300781943|ref|YP_003762234.1| DNA gyrase subunit B [Amycolatopsis mediterranei U32]
gi|384145142|ref|YP_005527958.1| DNA gyrase subunit B [Amycolatopsis mediterranei S699]
gi|399533826|ref|YP_006546488.1| DNA gyrase subunit B [Amycolatopsis mediterranei S699]
gi|299791457|gb|ADJ41832.1| DNA gyrase subunit B [Amycolatopsis mediterranei U32]
gi|340523296|gb|AEK38501.1| DNA gyrase subunit B [Amycolatopsis mediterranei S699]
gi|398314596|gb|AFO73543.1| DNA gyrase subunit B [Amycolatopsis mediterranei S699]
Length = 655
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/474 (47%), Positives = 314/474 (66%), Gaps = 22/474 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + I VLEGLEAVRKRP MYIGSTG RGLHHLV E++DN+VDEA AG+A+ +EV LLA
Sbjct: 8 YNASSITVLEGLEAVRKRPGMYIGSTGERGLHHLVQEVVDNSVDEAMAGHATKVEVTLLA 67
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D V V D+GRGIP+D+HP K LE VLTVLHAGGKF S Y+VSGGLHGVG+SVV
Sbjct: 68 DGGVRVVDDGRGIPVDMHPKEQKPTLEVVLTVLHAGGKF--DSDSYAVSGGLHGVGVSVV 125
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS+ L V G + Q+Y+ P + + GT I FW D +F T
Sbjct: 126 NALSKKLLAEVKYGGRSWRQEYTDQIP-----GPLEDLGPASETGTTITFWADGDIFETT 180
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKE-----------DSDPEKNQYNEYFFAGGLEE 305
++ TI+ R++E+AFLN LT++LR E + + + Y + GGLE+
Sbjct: 181 T-YNFETISRRLQEMAFLNKGLTLSLRDERVADEEAEADAEGKVARVKEKTYCYPGGLED 239
Query: 306 YVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 364
+V+ +N K P+H V+ F G+ +++A+QW ++ ++ ++ +AN+I T +GGTH E
Sbjct: 240 FVKHINGSKDPIHSSVISFEAKGTGLEVEVAMQW-NNGFTPSVYTFANTINTHEGGTHEE 298
Query: 365 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 424
G +A+LTR +N+ + K +K+KD +L+G+ VREGL I+S+++ P+FEGQTKT+LGN
Sbjct: 299 GFRAALTRVVNTYARDKKLLKEKDTNLTGDDVREGLAAIVSIKLSEPQFEGQTKTKLGNS 358
Query: 425 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 484
E + V Q+ E+L ++ E +P +I++KS+S+ +A +AA++ARDLVR+K L L
Sbjct: 359 EAKTFVQQTSNEWLADWFERNPTEAKTIINKSISSAQARMAARKARDLVRRKGALDIGGL 418
Query: 485 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PGKL DC ST PEE E++IVEGDSAGGSAK+GRD +Q I+ P++ I A
Sbjct: 419 PGKLKDCRSTKPEECELYIVEGDSAGGSAKEGRDSMYQAIL-PIRGKIINVEKA 471
>gi|315917788|ref|ZP_07914028.1| DNA gyrase subunit B [Fusobacterium gonidiaformans ATCC 25563]
gi|317059526|ref|ZP_07924011.1| DNA gyrase subunit B [Fusobacterium sp. 3_1_5R]
gi|313685202|gb|EFS22037.1| DNA gyrase subunit B [Fusobacterium sp. 3_1_5R]
gi|313691663|gb|EFS28498.1| DNA gyrase subunit B [Fusobacterium gonidiaformans ATCC 25563]
Length = 638
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/464 (49%), Positives = 311/464 (67%), Gaps = 9/464 (1%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
YG++ I VLEGLEAVRKRP MYIG+T RGLHHLV+E++DN+VDEA AGY + I V++L
Sbjct: 3 NYGAQNITVLEGLEAVRKRPGMYIGTTSARGLHHLVWEVVDNSVDEALAGYCNTITVSIL 62
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DN + V DNGRGIP+D+HP KSALE VLTVLHAGGKF + Y VSGGLHGVG+SV
Sbjct: 63 PDNIIQVEDNGRGIPVDIHPKYGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGISV 120
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALSE E+ V RDG Y+QKY RGKP+ + + +++ D GT + F PD ++F T
Sbjct: 121 VNALSEWTEIKVKRDGNVYYQKYLRGKPIEDVKI-ISSLEAGDTTGTTVTFKPDAEIFET 179
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
I F++ + R++ELA+LN L I L D E + ++ F GG+ ++++ + + +
Sbjct: 180 VI-FEYEVLQHRLKELAYLNRGLEINLL--DCRNEIGKKEKFQFEGGISDFLKEVTHENQ 236
Query: 316 PL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
L + + + +D+A + + + S+T+ + N+I T +GGTH+ G + LT+ +
Sbjct: 237 VLLSKQIHVEGQAEQVGVDIAFTYTT-SQSETIYSFVNNINTTEGGTHVTGFRTCLTKVI 295
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +GK +K+KD L G +REG+ IISV+VP P+FEGQTKT+LGN EV +V+ +
Sbjct: 296 NDIGKSQGFLKEKDGKLQGGDIREGIVAIISVKVPQPQFEGQTKTKLGNSEVSGIVNSVL 355
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
L +LE +P+ I+ K L++ KA AA+RAR+ V +KSVL SLPGKLADCSS
Sbjct: 356 SVDLKIFLEDNPNDTKLIIEKILNSKKAREAAQRAREAVLRKSVLEVGSLPGKLADCSSK 415
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
EE EIF+VEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 416 KSEECEIFLVEGDSAGGSAKQGRDRYFQAIL-PLKGKILNVEKA 458
>gi|320108482|ref|YP_004184072.1| DNA gyrase subunit B [Terriglobus saanensis SP1PR4]
gi|319927003|gb|ADV84078.1| DNA gyrase, B subunit [Terriglobus saanensis SP1PR4]
Length = 877
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/484 (48%), Positives = 332/484 (68%), Gaps = 16/484 (3%)
Query: 61 SSIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVD 120
S ATEA ++ + TY S+ I++LEGLEAVR RPAMYIGSTG +GLHHLVYE++DN+VD
Sbjct: 13 SGTATEAAPQSVQTTTYTSDNIKILEGLEAVRLRPAMYIGSTGEQGLHHLVYEVVDNSVD 72
Query: 121 EAQAGYASNIEVALLADNSVSVADNGRGIPIDLH--PATNK-SALETVLTVLHAGGKFGG 177
EA AG+A+ I+V + DNSV+V D+GRGIP+D+ P +K +A+E VLT LHAGGKF
Sbjct: 73 EALAGHATRIDVTIHVDNSVTVVDDGRGIPVDMKTLPDGSKMAAVEVVLTKLHAGGKFDA 132
Query: 178 SSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSK 237
SS Y VSGGLHGVG+S VNALSE +V +WRDG Y Q YS+G P+ V V
Sbjct: 133 SS--YKVSGGLHGVGVSCVNALSEEFDVEIWRDGHTYQQNYSKGDPLEA----VREVGVS 186
Query: 238 DRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQ--YN 295
++GT++ F PD+ +FT +++++T+A R+R+LAFLN + I L E S K + +N
Sbjct: 187 KKRGTKVHFLPDRSIFTVH-EYNYDTLANRLRQLAFLNKGIEITLTDERSIDAKGEAKHN 245
Query: 296 EYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDG-ITIDLALQWCSDAYSDTMLGYANSI 354
++ + GG+ E+++ LN K LH+ + + G + +++ALQ+ +DAYS+T+ +AN+I
Sbjct: 246 DFKYNGGIAEFIKHLNKGKAVLHEKPIYMEAERGQLVMEIALQY-NDAYSETVFSFANNI 304
Query: 355 RTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFE 414
T+DGGTH+ G + SLTRT+N+ G+ KD SLSG+ VREGL ++SV++P P+FE
Sbjct: 305 NTVDGGTHLSGFRTSLTRTINAAGQSMGLFKDLKESLSGDDVREGLVAVVSVKLPQPQFE 364
Query: 415 GQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVR 474
GQTK +L N ++ V V E L + E +P V I++K++ A +A AA++ARDL R
Sbjct: 365 GQTKGKL-NSDISGQVQSFVNERLGVFFEQNPQVAKKIINKAIDAARAREAARKARDLTR 423
Query: 475 QKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFA 534
+K L LPGKLADCS P+ E+++VEG+SAGG+AKQGRDRRFQ I+ PL+ I
Sbjct: 424 RKGALDGGGLPGKLADCSERQPDRCELYLVEGESAGGTAKQGRDRRFQAIL-PLKGKILN 482
Query: 535 FASA 538
A
Sbjct: 483 VEKA 486
>gi|448298517|ref|ZP_21488545.1| DNA gyrase subunit B [Natronorubrum tibetense GA33]
gi|445591187|gb|ELY45393.1| DNA gyrase subunit B [Natronorubrum tibetense GA33]
Length = 643
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/460 (49%), Positives = 319/460 (69%), Gaps = 9/460 (1%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +I V +
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVTIHE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNSVSVAD+GRGIP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DNSVSVADDGRGIPVDTHDEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LE V RDG + + G+PV + V ++ + GT++RFW D +F A
Sbjct: 125 NALSERLEAEVRRDGAVFRHAFETGEPVGDME-RVRDMEPDEETGTQVRFWADTDIFE-A 182
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY--NEYFFAGGLEEYVQWLNTDK 314
+F +T++ R+RELAFLN + I LR E + ++ + Y + GG+ E+V++LN +
Sbjct: 183 DEFSFSTLSNRLRELAFLNSGVRITLRDEREQTDDGEFVADTYEYDGGIREFVEYLNETR 242
Query: 315 KPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+HD ++ F + I I++A+Q ++ ++ +AN+I T +GGTH+ G K +LTRT
Sbjct: 243 SAMHDDIIYFEDEEQNIQIEVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTRT 301
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N + + D + +L+GE +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ +
Sbjct: 302 VNDYAGDNGLLSDLEENLTGEDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESA 361
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
+ E L Y E HPD +I+ K++ A KA AA++A +L R+KS L S+SLPGKLADC +
Sbjct: 362 MHEGLGTYFEEHPDTAQAIVMKAVEAAKARKAARKAEELTRRKSALDSTSLPGKLADCQT 421
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P+E+E+FI EGDSAGGSAKQ R+ +Q I+ P++ I
Sbjct: 422 KDPDEAELFIAEGDSAGGSAKQARNPDYQAIL-PIKGKIL 460
>gi|269124283|ref|YP_003297653.1| DNA gyrase subunit B [Thermomonospora curvata DSM 43183]
gi|268309241|gb|ACY95615.1| DNA gyrase, B subunit [Thermomonospora curvata DSM 43183]
Length = 649
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 232/469 (49%), Positives = 321/469 (68%), Gaps = 16/469 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + I VLEGLEAVRKRP MYIGSTG RGLHHLVYEI+DN+VDEA AGYA IEV LLA
Sbjct: 3 YDASSITVLEGLEAVRKRPGMYIGSTGERGLHHLVYEIVDNSVDEALAGYADTIEVTLLA 62
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D V VADNGRGIP+D HP + A+E VLT LHAGGKF G S Y+VSGGLHGVG SVV
Sbjct: 63 DGGVRVADNGRGIPVDEHPVEKRPAIEVVLTTLHAGGKFDGKS--YAVSGGLHGVGSSVV 120
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS L+ V + G + Q Y+ P+ L + D GT I FWPD ++F T
Sbjct: 121 NALSTRLDAEVRQKGYVWRQSYTWRGPIAPLAKG----EPTDETGTTITFWPDPEIFET- 175
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKE------DSDPEKNQYNEYFFAGGLEEYVQWL 310
++++ T++ R++E+AFLN L+I L E D + + Y + GG+ ++V++L
Sbjct: 176 VEWNFETLSRRLQEMAFLNRGLSITLTDERPGHLGGEDGTEPRRVVYCYEGGISDFVRYL 235
Query: 311 NTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
N K +H DV+ F + +G+++++A+QW S +Y++++ +AN+I T +GGTH EG +++
Sbjct: 236 NAKKDAVHPDVISFEEHTEGMSVEVAMQW-SGSYTESVHTFANTINTAEGGTHEEGFRSA 294
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
LT +N + +++KD +L+GE VREGLT IIS+++ NP+FEGQTKT+LGN E R
Sbjct: 295 LTSVVNRYARDKGLLREKDDNLTGEDVREGLTAIISIKLTNPQFEGQTKTKLGNTEARSF 354
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
V ++V E+L ++ + P I++K+ A +A +AA++ARDL R+KS+L S+SLPGKLA
Sbjct: 355 VQKTVHEHLKDWFDREPGQAKEIINKASQAARARIAARQARDLTRRKSLLESTSLPGKLA 414
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
DC ST P + E++IVEGDSAGGSAK GR+ FQ I+ P++ I A
Sbjct: 415 DCQSTDPAKCELYIVEGDSAGGSAKGGRNPHFQAIL-PIRGKILNVEKA 462
>gi|239637290|ref|ZP_04678277.1| DNA gyrase, B subunit [Staphylococcus warneri L37603]
gi|239597127|gb|EEQ79637.1| DNA gyrase, B subunit [Staphylococcus warneri L37603]
Length = 640
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 240/466 (51%), Positives = 310/466 (66%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA I V
Sbjct: 7 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYADEINVT 66
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 67 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 124
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE LEV V R+ YHQ Y +G P L + S D+ GT IRF D +F
Sbjct: 125 SVVNALSEDLEVYVHRNDTIYHQAYKKGVPQFDLK----EIGSTDKTGTAIRFKADSSIF 180
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +++ T+ RIRELAFLN + I L E + + Q + Y + GG++ YV+ LN +
Sbjct: 181 TETTVYNYETLQQRIRELAFLNKGIQITLTDERDEDDIRQ-DSYHYEGGIKSYVEMLNEN 239
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+P+H + + + D I +++A+Q+ + YS +L YAN+I T +GGTH +G K +LTR
Sbjct: 240 KEPIHGEPIYIHQSKDDIEVEIAIQY-NKGYSTNLLTYANNIHTYEGGTHEDGFKRALTR 298
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G SK +K+ LSGE REGLT IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 299 VLNSYGMNSKIIKEDKDRLSGEDTREGLTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 358
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 359 LFSEHFERFLYENPSVGRIIVEKGIMASRARVAAKKAREVTRRKSALEISSLPGKLADCS 418
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PEESEIF+VEGDSAGGS K GRD Q I+ PL+ I A
Sbjct: 419 SKNPEESEIFLVEGDSAGGSTKSGRDSSTQAIL-PLRGKILNVEKA 463
>gi|333029415|ref|ZP_08457476.1| DNA gyrase, B subunit [Bacteroides coprosuis DSM 18011]
gi|332740012|gb|EGJ70494.1| DNA gyrase, B subunit [Bacteroides coprosuis DSM 18011]
Length = 652
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/466 (48%), Positives = 312/466 (66%), Gaps = 12/466 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y ++ IQVLEGLEAVRKRPAMYIG T +GLHHLVYE++DN++DEA AGY +I+V +
Sbjct: 12 SYKADSIQVLEGLEAVRKRPAMYIGDTSLKGLHHLVYEVVDNSIDEALAGYCDHIDVTIN 71
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP D H +SALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 72 EDNSITVKDNGRGIPTDFHEKEQRSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 129
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS + V R+G+ Y Q+Y+ GKP V V + D GT+ FWPD +FT
Sbjct: 130 VNALSTRMITEVSRNGITYRQEYACGKP----QYPVKEVGTTDDTGTKQTFWPDPTIFTV 185
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTD 313
+ + ++ +A R+RELAFLN L I+L + + E Y F GL+E+V+++++
Sbjct: 186 LV-YSYDILATRMRELAFLNAGLKISLTDKRTQNEDGTYKSESFQSKEGLKEFVRYIDSS 244
Query: 314 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
++ L +DV+ + G+ I++A+ + + ++S+ + Y N+I TI+GGTH+ G + +LTR
Sbjct: 245 REHLVNDVIYLNTEKQGVPIEVAIMYNT-SFSENIHSYVNNINTIEGGTHLAGFRRALTR 303
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
TL + +K + + +SG+ REGLT +IS++V P+FEGQTKT+LGN EV VDQ
Sbjct: 304 TLKKYAEDNKLLDKIKVDISGDDFREGLTAVISIKVAEPQFEGQTKTKLGNTEVMGAVDQ 363
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+V E L YLE HP +I+ K + A A AA++AR+LV++KS + LPGKLADCS
Sbjct: 364 AVGEALNYYLEEHPREAKTIVDKVILAATARHAARKARELVQRKSPMSGGGLPGKLADCS 423
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PE E+F+VEGDSAGG+AKQGRDR FQ I+ PL+ I A
Sbjct: 424 EKNPEICELFLVEGDSAGGTAKQGRDRSFQAIL-PLRGKILNVEKA 468
>gi|255971553|ref|ZP_05422139.1| DNA gyrase subunit B [Enterococcus faecalis T1]
gi|255962571|gb|EET95047.1| DNA gyrase subunit B [Enterococcus faecalis T1]
Length = 649
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/470 (50%), Positives = 320/470 (68%), Gaps = 19/470 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DEA AG+A +I+V
Sbjct: 12 AQEYDASQIQVLEGLEAVRKRPGMYIGSTSGEGLHHLVWEIVDNSIDEALAGFAKSIQVI 71
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ D+S++V D+GRGIP+ + T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 72 IEPDDSITVIDDGRGIPVGIQAKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGS 129
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS SL+V V++DG Y+Q+Y RG V L ++ DR GT + F PD ++F
Sbjct: 130 SVVNALSTSLDVRVYKDGKVYYQEYRRGAVVDDLKV----IEETDRHGTTVHFIPDPEIF 185
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +D + +A R+RELAFLN L I++ ED + EY + GG++ YV+ LN +
Sbjct: 186 TETTVYDFDKLATRVRELAFLNRGLHISI--EDRREGQEDKKEYHYEGGIKSYVEHLNAN 243
Query: 314 K-----KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
K +P+ + G ++D IT+++++Q+ +D Y +L +AN+I T +GGTH G K
Sbjct: 244 KDVIFPEPIF-IEGEQQD---ITVEVSMQY-ADGYHSNILSFANNIHTYEGGTHESGFKT 298
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
SLTR +N +K K +K+ D L+GE VREGLT ++S++ P+P+FEGQTKT+LGN EVR
Sbjct: 299 SLTRVINDYARKQKLMKENDEKLTGEDVREGLTAVVSIKHPDPQFEGQTKTKLGNSEVRT 358
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
V D+ EY T++L +P V I+ K + A KA LAAKRAR++ R+K L S+LPGKL
Sbjct: 359 VTDRLFSEYFTKFLMENPTVGKQIVEKGMLASKARLAAKRAREVTRRKGALEISNLPGKL 418
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
ADCSS PE+ E+FIVEGDSAGGSAKQGR R FQ I+ P++ I A
Sbjct: 419 ADCSSKDPEKCELFIVEGDSAGGSAKQGRSREFQAIL-PIRGKILNVEKA 467
>gi|384440684|ref|YP_005656987.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni M1]
gi|415747174|ref|ZP_11475857.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 327]
gi|419642709|ref|ZP_14174492.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni ATCC
33560]
gi|419693377|ref|ZP_14221368.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni LMG 9872]
gi|307746967|gb|ADN90237.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni M1]
gi|315931303|gb|EFV10272.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 327]
gi|380624125|gb|EIB42791.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni ATCC
33560]
gi|380672796|gb|EIB87944.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni LMG 9872]
Length = 769
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/466 (46%), Positives = 310/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I+V
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD Q+
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGV----IGKSKKTGTTIEFWPDDQI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LNPK+TI + D ++ + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYEILAKRFRELAYLNPKITINFK----DNRVGKHESFHFEGGISQFVTDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKAIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++GE VREGL ++SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDNKITGEDVREGLIAVVSVKVPEPQFEGQTKGKLGSTYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYLT+Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|424677999|ref|ZP_18114846.1| DNA gyrase, B subunit [Enterococcus faecalis ERV103]
gi|424679672|ref|ZP_18116489.1| DNA gyrase, B subunit [Enterococcus faecalis ERV116]
gi|402352698|gb|EJU87539.1| DNA gyrase, B subunit [Enterococcus faecalis ERV103]
gi|402355888|gb|EJU90643.1| DNA gyrase, B subunit [Enterococcus faecalis ERV116]
Length = 649
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/470 (50%), Positives = 320/470 (68%), Gaps = 19/470 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DEA AG+A +I+V
Sbjct: 12 AQEYDASQIQVLEGLEAVRKRPGMYIGSTSGEGLHHLVWEIVDNSIDEALAGFAKSIQVI 71
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ D+S++V D+GRGIP+ + T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 72 IEPDDSITVIDDGRGIPVGIQAKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGS 129
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS SL+V V++DG Y+Q+Y RG V L ++ DR GT + F PD ++F
Sbjct: 130 SVVNALSTSLDVRVYKDGKVYYQEYRRGAVVDDLKV----IEETDRHGTTVHFIPDPEIF 185
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +D + +A R+RELAFLN L I++ ED + EY + GG++ YV+ LN +
Sbjct: 186 TETTVYDFDKLATRVRELAFLNRGLHISI--EDRRGGQEDKKEYHYEGGIKSYVEHLNAN 243
Query: 314 K-----KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
K +P+ + G ++D IT+++++Q+ +D Y +L +AN+I T +GGTH G K
Sbjct: 244 KDVIFPEPIF-IEGEQQD---ITVEVSMQY-TDGYHSNILSFANNIHTYEGGTHESGFKT 298
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
SLTR +N +K K +K+ D L+GE VREGLT ++S++ P+P+FEGQTKT+LGN EVR
Sbjct: 299 SLTRVINDYARKQKLMKENDEKLTGEDVREGLTAVVSIKHPDPQFEGQTKTKLGNSEVRT 358
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
V D+ EY T++L +P V I+ K + A KA LAAKRAR++ R+K L S+LPGKL
Sbjct: 359 VTDRLFSEYFTKFLMENPTVGKQIVEKGMLASKARLAAKRAREVTRRKGALEISNLPGKL 418
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
ADCSS PE+ E+FIVEGDSAGGSAKQGR R FQ I+ P++ I A
Sbjct: 419 ADCSSKDPEKCELFIVEGDSAGGSAKQGRSREFQAIL-PIRGKILNVEKA 467
>gi|336397547|ref|ZP_08578347.1| DNA gyrase subunit B [Prevotella multisaccharivorax DSM 17128]
gi|336067283|gb|EGN55917.1| DNA gyrase subunit B [Prevotella multisaccharivorax DSM 17128]
Length = 657
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/465 (48%), Positives = 309/465 (66%), Gaps = 16/465 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN +DEA AGY + +EV +
Sbjct: 10 NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNCIDEAMAGYCTEVEVTIN 69
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
D S +V DNGRGIP+D H +KSALE V+TVLHAGGKF +S Y VSGGLHGVG+S
Sbjct: 70 TDGSCTVEDNGRGIPVDEHKKLHKSALEVVMTVLHAGGKFDKNS--YKVSGGLHGVGVSC 127
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS ++ V+RDG Y Q+Y +GKP+ V + D++GTR +FWPD +FTT
Sbjct: 128 VNALSTRMKSQVYRDGHIYQQEYEKGKPLYP----VKMIGDTDKRGTRQQFWPDPTIFTT 183
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTD 313
F + +A R+RELA+LN + I L DPE + + F GL+E+V++++
Sbjct: 184 TT-FQWDIVARRMRELAYLNAGIKITLTDLRPDPETGKTRQEVFHAKDGLKEFVRYIDRH 242
Query: 314 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
++ L DV+ + + G+ I++A+ + +D YS+ + Y N+I TI+GGTH+ G + +LTR
Sbjct: 243 RQHLFDDVIYLKTEKQGVPIEVAIMYNTD-YSENLHSYVNNINTIEGGTHVTGFRMALTR 301
Query: 373 TLNSLGKKS----KTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
+ + K ++ I ++ E REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 302 VMKNYADNDPQIRKQIEKAKIEVASEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSG 361
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
V+Q+V E LT YLE HPD I K + A A +AA++AR+ V++KSV+ S LPGKL
Sbjct: 362 AVNQAVGEALTNYLEEHPDEAHKICEKVILAATARIAARKARESVQRKSVMGGSGLPGKL 421
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCS+ P++ EIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 422 ADCSNRDPKDCEIFLVEGDSAGGSAKQGRDRYTQAIL-PLRGKIL 465
>gi|419635001|ref|ZP_14167321.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 55037]
gi|380613582|gb|EIB33053.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 55037]
Length = 769
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/466 (46%), Positives = 310/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I+V
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNISGLHHMIYEVVDNSIDEAMAGHCDTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD Q+
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGV----IGKSKKTGTTIEFWPDDQI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LNPK+TI + D ++ + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYEILAKRFRELAYLNPKITINFK----DNRVGKHESFHFEGGISQFVTDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKAIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++G+ VREGL I+SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDNKITGDDVREGLIAIVSVKVPEPQFEGQTKGKLGSTYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYLT+Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|409198278|ref|ZP_11226941.1| DNA gyrase subunit B [Marinilabilia salmonicolor JCM 21150]
Length = 655
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 233/479 (48%), Positives = 321/479 (67%), Gaps = 14/479 (2%)
Query: 65 TEAFKENPVSKT--YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEA 122
++ E + KT Y + IQVLEGLEAVRKRPAMYIG G +GLHHLVYE++DN++DEA
Sbjct: 2 SDNINEGNLEKTNGYSASSIQVLEGLEAVRKRPAMYIGDVGYKGLHHLVYEVVDNSIDEA 61
Query: 123 QAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGY 182
AGY ++I V + DNS++V DNGRGIP+D H +SALE V+TVLHAGGKF S Y
Sbjct: 62 LAGYCTSIGVTINEDNSITVVDNGRGIPVDFHEKEGRSALEVVMTVLHAGGKFDKDS--Y 119
Query: 183 SVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGT 242
VSGGLHGVG+S VNALS SL+ V RDG Y Q+YS+GKP++++ V + D GT
Sbjct: 120 KVSGGLHGVGVSCVNALSISLKAEVHRDGKIYRQEYSKGKPLSSIE----EVGTTDINGT 175
Query: 243 RIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL-RKEDSDPEKNQYNEYFFAG 301
I F PD +F ++ ++ +A R+REL+FLN L I L K + D E N +E F++
Sbjct: 176 WITFKPDDSIFNET-EYKYSVLANRMRELSFLNAGLEIVLIDKREVDDEGNVKSERFYSD 234
Query: 302 -GLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDG 359
GL E+V++++ +++ L D + + + + +D+A+ + + ++++ + Y N+I TI+G
Sbjct: 235 EGLLEFVKFIDVNREHLIDQPISISTEKNDVPVDIAIVYNT-SFNENIYSYVNNINTIEG 293
Query: 360 GTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKT 419
GTH+ G + LTRTL + KS + +SG+ REGLT +ISV+V P+FEGQTKT
Sbjct: 294 GTHLTGFRRGLTRTLKNWADKSGLLSKLKFDISGDDFREGLTAVISVKVAEPQFEGQTKT 353
Query: 420 RLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVL 479
+LGN EV VDQ+V L YLE +P +I++K + A A AA++AR+LV++KSVL
Sbjct: 354 KLGNSEVSLAVDQAVSTMLNNYLEENPKDAKAIVNKVILAATARHAARKARELVQRKSVL 413
Query: 480 RSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKLADCS P +SEIF+VEGDSAGG+AKQGR RRFQ I+ PL+ I A
Sbjct: 414 TGGGLPGKLADCSEKDPAQSEIFLVEGDSAGGTAKQGRSRRFQAIL-PLRGKILNVEKA 471
>gi|419697904|ref|ZP_14225631.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni LMG 23211]
gi|380676934|gb|EIB91810.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni LMG 23211]
Length = 769
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/466 (46%), Positives = 310/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I+V
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD Q+
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGV----IGKSKKTGTTIEFWPDDQI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LNPK+TI + D ++ + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYEILAKRFRELAYLNPKITINFK----DNRVGKHESFHFEGGISQFVTDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKAIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++GE VREGL ++SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDNKITGEDVREGLIAVVSVKVPEPQFEGQTKGKLGSTYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYLT+Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|256830858|ref|YP_003159586.1| DNA gyrase subunit B [Desulfomicrobium baculatum DSM 4028]
gi|256580034|gb|ACU91170.1| DNA gyrase, B subunit [Desulfomicrobium baculatum DSM 4028]
Length = 803
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 234/461 (50%), Positives = 311/461 (67%), Gaps = 16/461 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ TY ++ I VLEGL AVR RPAMYIGST GLHHLVYE++DN++DEA AGY +I+V
Sbjct: 5 TSTYTADNITVLEGLSAVRMRPAMYIGSTNTNGLHHLVYEVIDNSIDEAMAGYCDHIKVV 64
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNSVS+ DNGRGIP+D+HP K ALE V+TVLHAGGKF S Y VSGGLHGVG+
Sbjct: 65 VHMDNSVSIVDNGRGIPVDMHPKEKKPALEVVMTVLHAGGKFDNDS--YKVSGGLHGVGV 122
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE LEVTV R G ++Q+Y RG P L + D+ GT +RF PD+ +F
Sbjct: 123 SVVNALSEYLEVTVSRGGHRHYQRYCRGVPQAPLAV----IGETDKTGTLVRFRPDEDIF 178
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNT 312
+ F ++ +A R ELA+LNP + I E K+Q + F + GG+ +V+ N
Sbjct: 179 E-ELDFQYDVLAKRFEELAYLNPGIKIEFFDE-----KSQNRDVFKYEGGIISFVKNKNQ 232
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
D +H VVG +++G++ID ALQ+ + Y + + +AN+IRT +GGTH++G K +LTR
Sbjct: 233 DNG-IHKVVGGTGEMEGVSIDFALQYTA-GYKENVFTFANNIRTKEGGTHLQGFKTALTR 290
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N+ + S K +SG+ VREGLT IISV++PNP+FEGQTKT+LGN EV V
Sbjct: 291 AINTYIQNSDVPKKLKQKVSGDDVREGLTAIISVKIPNPQFEGQTKTKLGNSEVAGYVAT 350
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
V E L ++ +P + I+ K + A +A AA+RA+DLVR+K L ++LPGKLADC
Sbjct: 351 MVYEALNQFFGENPKDVRLIIEKVIDAARARDAARRAKDLVRRKGALSDNALPGKLADCQ 410
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
S P E E+FIVEGDSAGGSAKQGR+ +FQ I+ PL+ I
Sbjct: 411 SKDPAECEVFIVEGDSAGGSAKQGRNPKFQAIL-PLRGKIL 450
>gi|365155917|ref|ZP_09352259.1| DNA gyrase subunit B [Bacillus smithii 7_3_47FAA]
gi|363627842|gb|EHL78686.1| DNA gyrase subunit B [Bacillus smithii 7_3_47FAA]
Length = 643
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 248/469 (52%), Positives = 315/469 (67%), Gaps = 17/469 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S++Y + QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY S I V
Sbjct: 10 SQSYDASQIQVLEGLEAVRKRPGMYIGSTSSKGLHHLVWEIVDNSIDEALAGYCSEINVI 69
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++V DNGRGIP+D+ + A+E ++TVLHAGGKFGG S LHGVG
Sbjct: 70 VEEDNSITVIDNGRGIPVDIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGA 127
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS LEV V RDG Y+QKY RG PV L + DR GT + F PD ++F
Sbjct: 128 SVVNALSTELEVFVHRDGNIYYQKYRRGVPVEDLKT----IGHTDRTGTTVHFKPDPEIF 183
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T FD++ +A RIRELAFLN + I + ED + + NEY + GG++ YV LN
Sbjct: 184 TETTVFDYDVLATRIRELAFLNRNIKITI--EDRREGQKRKNEYHYEGGIKSYVAHLNRT 241
Query: 314 KKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
K+ LH+ V G + D I +++ALQ+ ++ +S + +AN+I T +GGTH G K +
Sbjct: 242 KEVLHEEPIYVEGLKDD---IQVEIALQY-NEGFSSNIYSFANNIHTYEGGTHESGFKTA 297
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
LTR +N +K+ +KD D +LSGE VREGLT I+S++ PNP+FEGQTKT+LGN E R V
Sbjct: 298 LTRVINDYARKNGLIKDSDQNLSGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTV 357
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
D E+ YL +P V I+ K L A +A LAAK+AR+L R+KS L SSLPGKLA
Sbjct: 358 TDALFSEHFETYLLENPSVARKIVEKGLMAARARLAAKKARELTRRKSALEVSSLPGKLA 417
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
DCSS P SE+FIVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 418 DCSSRDPSISELFIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 465
>gi|205355744|ref|ZP_03222514.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni CG8421]
gi|205346521|gb|EDZ33154.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni CG8421]
Length = 769
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/466 (47%), Positives = 310/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I+V
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ V + GT I FWPD Q+
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGV----VGKSKKTGTTIEFWPDDQI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LNPK+TI + D ++ + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYEILAKRFRELAYLNPKITINFK----DNRVGKHESFHFEGGISQFVTDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKAIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++G+ VREGL I+SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDNKITGDDVREGLIAIVSVKVPEPQFEGQTKGKLGSTYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYLT+Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|23978276|dbj|BAC21123.1| DNA gyrase B subunit [Pleurocapsa sp. PCC 7327]
Length = 391
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/399 (57%), Positives = 298/399 (74%), Gaps = 10/399 (2%)
Query: 102 TGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSA 161
TGPRGLHHLVYE++DN++DEA AGY ++IEV + +D SV+V DNGRGIP D HP T KSA
Sbjct: 1 TGPRGLHHLVYEVVDNSIDEALAGYCTHIEVDINSDGSVTVTDNGRGIPTDTHPTTGKSA 60
Query: 162 LETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG 221
LETV+TVLHAGGKFGG S LHGVG+SVVNALSE ++VTVWRD + Q+Y RG
Sbjct: 61 LETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVKVTVWRDNKVHTQRYERG 118
Query: 222 KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIA 281
PVT L + + ++R GT I F PD Q+FT I+FD++T+AGR++ELA+LN + I
Sbjct: 119 IPVTELE---IKPEKEERTGTSITFLPDLQIFTGGIEFDYSTLAGRLKELAYLNAGVKIT 175
Query: 282 LR-KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 339
K S+P Y + GG++EYV ++ +K+PLH D++ + +GI +++A+QWC
Sbjct: 176 FSDKRGSEP---HVETYCYEGGIKEYVAYMCREKQPLHQDIIYVSGEKNGIQLEVAMQWC 232
Query: 340 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 399
DAYSD +LG+AN+IRTIDGGTH+EG+K LTRTLNS+ +K +KD + +L+GE+VREG
Sbjct: 233 VDAYSDNLLGFANNIRTIDGGTHLEGLKTVLTRTLNSVARKRNKIKDNEPNLAGENVREG 292
Query: 400 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 459
LT +ISV+VP PEFEGQTKT+LGN EVR +VD E L EYLE HP V D+I+ K++ A
Sbjct: 293 LTGVISVKVPEPEFEGQTKTKLGNTEVRGIVDSIAGEALNEYLEFHPQVADAIIEKAVQA 352
Query: 460 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEE 498
KAA AA+RAR+LVR+KSVL SS LPGKLADCSS P E
Sbjct: 353 FKAAEAARRARELVRRKSVLESSPLPGKLADCSSRDPSE 391
>gi|435852819|ref|YP_007314138.1| DNA gyrase, B subunit [Halobacteroides halobius DSM 5150]
gi|433669230|gb|AGB40045.1| DNA gyrase, B subunit [Halobacteroides halobius DSM 5150]
Length = 634
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/464 (48%), Positives = 327/464 (70%), Gaps = 13/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y ++QIQVLEGLEAVRKRP MYIGST +GLHHLVYE++DN++DEA AGY +E+ +
Sbjct: 6 NYDADQIQVLEGLEAVRKRPGMYIGSTEKKGLHHLVYEVIDNSIDEALAGYCDEVEIKIE 65
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
++V DNGRGIP+ H ++ A+E V+TVLHAGGKF G GY VSGGLHGVG+SV
Sbjct: 66 PGEIITVRDNGRGIPVASHAKLDRPAVEVVMTVLHAGGKFEGE--GYKVSGGLHGVGVSV 123
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALSE LEV V R+G Y+QKY RG P L + + + GT IRF D+++F +
Sbjct: 124 VNALSEWLEVRVHRNGKIYYQKYHRGVPDNDLEV----IGNTEETGTEIRFKADEEIFES 179
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
++++++T++ R +ELA+LN ++ I + E D ++ E+ + GG+ +V+ +N
Sbjct: 180 -VRYNYDTLSQRFKELAYLNKEVKIKILDEREDLIED---EFKYDGGIISFVEEINEHNT 235
Query: 316 PLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
P+H DV+ F + +D +++A+Q+ +D Y+D + +AN+I T +GGTH+ G K++LTRT+
Sbjct: 236 PIHEDVIFFEEQIDNTEVEVAIQYNTD-YADKIFTFANNINTHEGGTHLSGFKSALTRTI 294
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +++ +KD D +LSG+ +REG+ II+VR+ +P+FEGQTKT+LGN E+R +VD V
Sbjct: 295 NDYARQNDFLKDDDNNLSGDDIREGIVAIINVRLTDPQFEGQTKTKLGNSEIRGMVDSIV 354
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
+ L+ L +P + I+ KS++A +A AAK+AR+L ++K+ L S++LPGKLADCSS
Sbjct: 355 SKGLSTILSENPKLGKQIVKKSIAAAQARKAAKKARELTKRKNALVSTALPGKLADCSSR 414
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
EESEI+IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 415 NAEESEIYIVEGDSAGGSAKQGRDREFQAIL-PLKGKILNVEKA 457
>gi|407941475|ref|YP_006857115.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni PT14]
gi|407905313|gb|AFU42142.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni PT14]
Length = 769
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/466 (46%), Positives = 310/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I+V
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD Q+
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGV----IGKSKKTGTTIEFWPDDQI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LNPK+TI + D ++ + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYEILAKRFRELAYLNPKITINFK----DNRVGKHESFHFEGGISQFVTDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKAIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
++S + + + ++KD ++G+ VREGL ++SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISSYIEANASAREKDNKITGDDVREGLIAVVSVKVPEPQFEGQTKGKLGSTYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYLT+Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|339641127|ref|ZP_08662571.1| DNA gyrase, B subunit [Streptococcus sp. oral taxon 056 str. F0418]
gi|339454396|gb|EGP67011.1| DNA gyrase, B subunit [Streptococcus sp. oral taxon 056 str. F0418]
Length = 649
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/475 (48%), Positives = 328/475 (69%), Gaps = 11/475 (2%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
TE +++ S+ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA A
Sbjct: 2 TEEMQQDIQSQEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALA 61
Query: 125 GYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 184
G+A++I+V + DNS++V D+GRGIP+D+ T + A+ETV TVLHAGGKFGG S
Sbjct: 62 GFATHIQVYIEKDNSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSG 121
Query: 185 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 244
LHGVG SVVNALS L+V V+++G + Q+Y RG+ V L + DR GT +
Sbjct: 122 G--LHGVGSSVVNALSTQLDVKVYKNGQIHFQEYRRGQVVADLKV----IGDTDRTGTTV 175
Query: 245 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 304
F PD ++FT +++D + + RI+ELAFLN L+I++ + E Q Y + GG+
Sbjct: 176 HFTPDPEIFTETVEYDFDKLNKRIQELAFLNRGLSISITDKRDGME--QTKNYHYEGGIA 233
Query: 305 EYVQWLNTDKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
YVQ++N +K+ + D + ++D IT+++A+Q+ + Y +T++ +AN+I T +GGTH
Sbjct: 234 SYVQYINENKEVIFDSPIYTDGEMDDITVEVAMQYTT-GYHETVMSFANNIHTHEGGTHE 292
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
+G + +LTR +N KK+K +K+ D +L+GE VREGLT +ISV+ PNP+FEGQTKT+LGN
Sbjct: 293 QGFRTALTRVINDYAKKNKLLKENDDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGN 352
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
EV K+ ++ E +++L +P V I+ K + A KA +AAKRAR++ R+KS L S+
Sbjct: 353 SEVVKITNRLFSEAFSDFLLENPAVAKKIVEKGILASKARIAAKRAREVTRKKSGLEISN 412
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKLADCSS P ++E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 413 LPGKLADCSSNNPVQTELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 466
>gi|331693904|ref|YP_004330143.1| DNA gyrase subunit B [Pseudonocardia dioxanivorans CB1190]
gi|326948593|gb|AEA22290.1| DNA gyrase, B subunit [Pseudonocardia dioxanivorans CB1190]
Length = 660
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/476 (48%), Positives = 313/476 (65%), Gaps = 24/476 (5%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + I VLEGLEAVRKRP MYIGSTG RGLHHL++E++DNAVDEA AGYA +EV L
Sbjct: 9 YSASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAGYADRVEVVLRP 68
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D V+V DNGRGIP+ +HP K A+E VLT+LHAGGKF S Y+VSGGLHGVG+SVV
Sbjct: 69 DGGVTVVDNGRGIPVGMHPVEKKPAVEMVLTMLHAGGKF--DSDSYAVSGGLHGVGVSVV 126
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS L+V + DG + QKY+R P + P + GT + FW D +F T
Sbjct: 127 NALSSRLDVDIDTDGFHWSQKYTRSVPGPLVKG--APTRA---TGTTVTFWADPDIFETT 181
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDS-------DPEKNQY----NEYFF--AGGL 303
++ T+ R++E+AFLN LTI LR E + +P+ Y EY F GL
Sbjct: 182 T-YNVETVRRRLQEMAFLNKGLTIVLRDERNGDNGEAEEPDAEGYVAKIKEYTFHYPNGL 240
Query: 304 EEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTH 362
E++V LN K P+H +V F + G +++A+QW S Y++++ +AN+I T +GGTH
Sbjct: 241 EDFVAHLNKTKDPIHKKLVSFSGEAPGHALEVAMQWNS-GYTESVYTFANTINTHEGGTH 299
Query: 363 IEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLG 422
EG +A+LT T+N + K +K+KD +LSG+ +REGL I+SV+V P+FEGQTKT+LG
Sbjct: 300 EEGFRAALTSTVNRYARDKKLLKEKDPALSGDDIREGLAAIVSVKVKEPQFEGQTKTKLG 359
Query: 423 NPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSS 482
N EV+ V + E+L ++ E +P +I++K++ + +A +AA++AR+LVR+KS
Sbjct: 360 NTEVKSFVQRVSNEWLADWFERNPTEARTIVNKAVQSAQARMAARKARELVRRKSAGDIG 419
Query: 483 SLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKLADC ST P SE++IVEGDSAGGSAK GRD FQ I+ P++ I A
Sbjct: 420 GLPGKLADCRSTDPSRSEVYIVEGDSAGGSAKSGRDSMFQAIL-PIRGKIINVEKA 474
>gi|387928232|ref|ZP_10130910.1| DNA gyrase subunit B [Bacillus methanolicus PB1]
gi|387587818|gb|EIJ80140.1| DNA gyrase subunit B [Bacillus methanolicus PB1]
Length = 640
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 242/466 (51%), Positives = 316/466 (67%), Gaps = 12/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+TY + QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY + I V
Sbjct: 8 EQTYDANQIQVLEGLEAVRKRPGMYIGSTSAKGLHHLVWEIVDNSIDEALAGYCTEINVT 67
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++V DNGRGIP+ + + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 68 IEKDNSITVVDNGRGIPVGIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGA 125
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS LEV V RDG ++QKY RG P L + DR GT IRF PD ++F
Sbjct: 126 SVVNALSTELEVFVHRDGKIHYQKYERGVPCEDLKL----IGETDRTGTTIRFKPDGEIF 181
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T ++FD+ T+A R+RELAFLN + I + ED E N+ NEY++ GG++ YV+ LN
Sbjct: 182 TETLEFDYETLANRLRELAFLNRGIRITI--EDKRVE-NKRNEYYYEGGIKSYVEHLNRT 238
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
++ LH+ + + DGIT+++ALQ+ +D +S + +AN+I T +GGTH G K +LTR
Sbjct: 239 REVLHEEPIYMEGEKDGITVEVALQY-NDGFSSNIYSFANNIHTYEGGTHESGFKTALTR 297
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N +K K+ D +LSGE VREGLT I+S++ P+P+FEGQTKT+LGN EVR + D
Sbjct: 298 VINDYARKHGIFKENDANLSGEDVREGLTAIVSIKHPDPQFEGQTKTKLGNSEVRAITDT 357
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E +L +P V I+ K L +A LAAK+AR+L R+K+ L SSLPGKLADCS
Sbjct: 358 IFAENFETFLLENPSVARKIVEKGLMGARARLAAKKARELTRRKNALEVSSLPGKLADCS 417
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P SE+++VEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 418 SKDPSISELYVVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 462
>gi|374812884|ref|ZP_09716621.1| DNA gyrase subunit B [Treponema primitia ZAS-1]
Length = 642
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 233/463 (50%), Positives = 311/463 (67%), Gaps = 20/463 (4%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA-------G 125
+S TY ++ IQVL+GLEAVRKRP MYIG+TG GLHHLV+E++DN++DEA A G
Sbjct: 1 MSSTYSAQNIQVLKGLEAVRKRPGMYIGTTGIDGLHHLVFEVVDNSIDEAMAINPETGKG 60
Query: 126 YASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVS 185
+ +I V L ++ V V DNGRGIP+D+HP SALE V+T LHAGGKF +S Y VS
Sbjct: 61 FCDDILVVLEGNDVVRVEDNGRGIPVDIHPGEGVSALELVMTRLHAGGKFDKNS--YKVS 118
Query: 186 GGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIR 245
GGLHGVG+SVVNALSE E V DG + Q+Y G P + DR+GT +R
Sbjct: 119 GGLHGVGVSVVNALSEWCEAFVHIDGKIHTQRYQIGVP----DAPTHEAGTTDRRGTVVR 174
Query: 246 FWPDKQVF-TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 304
F D +F TT FD ++ R+RELAFLN L I +R E K+ E+ F GG++
Sbjct: 175 FKADTSIFETTTYNFD--ALSNRLRELAFLNKGLKITIRDERLSTPKDH--EFKFDGGVK 230
Query: 305 EYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
+V +LN +K L+ + + DG+ ++ A+Q+ +D Y++ M + N I T +GGTH+
Sbjct: 231 SFVDYLNENKNVLYREPIFIEGSRDGVEVECAIQY-NDGYNEIMFSFVNDINTREGGTHL 289
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
G K++LTRTLN KKSK K + SLSG+ VREGLT ++S +VPNP+FEGQTK +LGN
Sbjct: 290 VGFKSALTRTLNEYLKKSKHAKKLEESLSGDDVREGLTAVLSTKVPNPQFEGQTKGKLGN 349
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
EV+ +V+ V E L YL+ HPDV+ +IL KS+ A KA +AA++ARD R+K+ + S+
Sbjct: 350 SEVKGIVESLVNEQLELYLDQHPDVIGNILEKSILAAKARIAARQARDATRRKNAMDSAG 409
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIIN 526
LPGKLADCS P E+FIVEGDSAGGSAK GR+R+FQ I++
Sbjct: 410 LPGKLADCSEKDPSLCELFIVEGDSAGGSAKMGRNRQFQAILS 452
>gi|78707355|gb|ABB46483.1| DNA gyrase subunit B [Acholeplasma laidlawii]
Length = 631
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/463 (49%), Positives = 303/463 (65%), Gaps = 13/463 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ IQ+LEGLEAV+KRP MYIGSTG RGLHHLV+EI+DN++DEA GYA I + +L
Sbjct: 5 YTADNIQILEGLEAVKKRPGMYIGSTGERGLHHLVWEIVDNSIDEALGGYADEITIEILK 64
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
+ V DNGRGIP+D+HP T + A+ET+LT LHAGGKF S Y VSGGLHGVG SVV
Sbjct: 65 GEVIRVTDNGRGIPVDIHPKTKRPAVETILTTLHAGGKFDKGS--YKVSGGLHGVGASVV 122
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
N LSE V + +DG Y QKY RG P L + D+ GT I F D +FT
Sbjct: 123 NGLSEWFVVEIHKDGTIYEQKYERGIPAYDLKIK----GNTDKTGTIISFQADPLIFTET 178
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+ +++ T+ RI++LAFLN L + L D E+++ + + GG+ EYV++LN K
Sbjct: 179 VIYNYETLRTRIQQLAFLNKGLKLNLI--DDRFEESKIESFHYEGGITEYVKFLNQSKSK 236
Query: 317 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
+H D++ K+ DGIT++LA+Q+ D+YS + + N+I T +GG H +G K +LTR ++
Sbjct: 237 IHNDIIYIDKEQDGITVELAMQFV-DSYSPNLHSFTNNISTTEGGMHEDGFKMALTRVIS 295
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
K KD S+SGE REGLT IISV+ P P+FEGQTKT+LGNPEVR + Q
Sbjct: 296 KYADDLKMKKDD--SISGEDTREGLTAIISVKHPEPQFEGQTKTKLGNPEVRAITSQITS 353
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E + +L +P +I+ K L A +A +AA++A+DL R+KS L + KLADC S
Sbjct: 354 EAIERFLMENPTQAKAIVEKVLLATRARVAARKAKDLTRRKSPLDALGFASKLADCRSKD 413
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PE+SEI+IVEGDSAGGSAKQGRD FQ I+ PL+ + A
Sbjct: 414 PEKSEIYIVEGDSAGGSAKQGRDSEFQAIM-PLRGKVLNVEKA 455
>gi|393408286|emb|CCI10030.1| topoisomerase II subunit B [Staphylococcus hominis]
gi|393809319|gb|AFN25833.1| DNA gyrase subunit B [Staphylococcus hominis]
gi|393809321|gb|AFN25834.1| DNA gyrase subunit B [Staphylococcus hominis]
gi|393809329|gb|AFN25838.1| DNA gyrase subunit B [Staphylococcus hominis]
Length = 644
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 242/466 (51%), Positives = 321/466 (68%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 71 IENDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V R+ YHQ Y +G P L + S D+ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EIGSTDKTGTVIRFKADSEIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
+ +++ T+ RIRELAFLN ++I LR E D E+ + Y + GG++ YV+ LN +
Sbjct: 185 SETTVYNYETLQKRIRELAFLNKGISITLRDEREDEEQREDT-YHYEGGIKSYVELLNEN 243
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ +HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KESIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTR 302
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G +SK +KD LSGE REGLT ++S++ NP+FEGQTKT+LGN EVR++VD+
Sbjct: 303 VLNSYGTQSKIIKDDKERLSGEDTREGLTAVVSIKHGNPQFEGQTKTKLGNSEVRQIVDR 362
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P+V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPNVARIIVEKGIMASRARVAAKKAREVTRRKSALEISSLPGKLADCS 422
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P+ESEIF+VEGDSAGGS K+GRD + Q I+ PL+ I A
Sbjct: 423 SKNPDESEIFLVEGDSAGGSTKEGRDSKTQAIL-PLRGKILNVEKA 467
>gi|262283011|ref|ZP_06060778.1| DNA gyrase subunit B [Streptococcus sp. 2_1_36FAA]
gi|262261263|gb|EEY79962.1| DNA gyrase subunit B [Streptococcus sp. 2_1_36FAA]
Length = 649
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/475 (48%), Positives = 329/475 (69%), Gaps = 11/475 (2%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
TE +++ S+ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA A
Sbjct: 2 TEEKQQDIQSQEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALA 61
Query: 125 GYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 184
G+AS+I+V + DNS++V D+GRGIP+D+ T + A+ETV TVLHAGGKFGG S
Sbjct: 62 GFASHIQVFIEKDNSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSG 121
Query: 185 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 244
LHGVG SVVNALS L+V V+++G + Q+Y+RG+ V L + DR GT +
Sbjct: 122 G--LHGVGSSVVNALSTQLDVKVYKNGQIHFQEYTRGQVVADLKV----IGDTDRTGTTV 175
Query: 245 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 304
F PD ++FT ++FD + RI+ELAFLN L+I++ + E Q +Y + GG+
Sbjct: 176 HFTPDPEIFTETVEFDFEKLNKRIQELAFLNRGLSISITDKRDGME--QSKDYHYEGGIA 233
Query: 305 EYVQWLNTDKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
YVQ++N +K+ + D + +++ IT+++A+Q+ + Y +T++ +AN+I T +GGTH
Sbjct: 234 SYVQYINENKEVIFDNPIYTDGEMEDITVEVAMQYTT-GYHETVMSFANNIHTHEGGTHE 292
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
+G + +LTR +N KK+K +K+ + +L+GE VREGLT +ISV+ PNP+FEGQTKT+LGN
Sbjct: 293 QGFRTALTRVINDYAKKNKLLKENEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGN 352
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
EV K+ ++ E +++L +P V I+ K + A KA +AAKRAR++ R+KS L S+
Sbjct: 353 SEVVKITNRLFSEAFSDFLLENPAVAKKIVEKGILASKARIAAKRAREVTRKKSGLEISN 412
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKLADCSS P E+E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 413 LPGKLADCSSNNPAETELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 466
>gi|393809325|gb|AFN25836.1| DNA gyrase subunit B [Staphylococcus hominis]
Length = 644
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 242/466 (51%), Positives = 321/466 (68%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 71 IENDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V + YHQ Y +G P L + S D+ GT IRF D ++F
Sbjct: 129 SVVNALSQELEVYVHLNETIYHQAYKKGVPQFDLK----EIGSTDKTGTVIRFKADSEIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
+ +++ T+ RIRELAFLN ++I LR E D E+ + Y + GG++ YV+ LN +
Sbjct: 185 SETTVYNYETLQKRIRELAFLNKGISITLRDEREDEEQREDT-YHYEGGIKSYVELLNEN 243
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTR 302
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G +SK +KD LSGE REGLT ++S++ NP+FEGQTKT+LGN EVR++VD+
Sbjct: 303 VLNSYGTQSKIIKDDKERLSGEDTREGLTAVVSIKHGNPQFEGQTKTKLGNSEVRQIVDR 362
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P+V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPNVARIIVEKGIMASRARVAAKKAREVTRRKSALEISSLPGKLADCS 422
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P+ESEIF+VEGDSAGGS K+GRD + Q I+ PL+ I A
Sbjct: 423 SKNPDESEIFLVEGDSAGGSTKEGRDSKTQAIL-PLRGKILNVEKA 467
>gi|335433679|ref|ZP_08558497.1| DNA gyrase subunit B [Halorhabdus tiamatea SARL4B]
gi|334898482|gb|EGM36588.1| DNA gyrase subunit B [Halorhabdus tiamatea SARL4B]
Length = 637
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/459 (50%), Positives = 313/459 (68%), Gaps = 13/459 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGL+AVRKRPAMYIGST RGLHHLVYE++DNA+DEA AG+ I V +
Sbjct: 7 YGAGQIQVLEGLQAVRKRPAMYIGSTDTRGLHHLVYEVVDNAIDEALAGHCDTIAVTMHD 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSV D+GRGIPID H ++ A+E ++TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVVDDGRGIPIDTHEEYDRPAVEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS LEV V R+G + Q + G P LT + ++ GT IRFWPD +F T
Sbjct: 125 NALSAKLEVEVRREGSVWKQTFDHGAPADDLT-EIEALEDSSETGTSIRFWPDGDIFETT 183
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKK 315
F +T+ R+RELAFLN + I L E ++Q E F + GG+ E+V++LN K
Sbjct: 184 -DFQFSTLENRLRELAFLNSGVEITLADE-----RDQRRETFQYDGGIREFVEYLNETKD 237
Query: 316 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
PLHD V+ F + +G+ +++ALQ ++ ++ +AN+I T +GGTH+ G K +LTR +
Sbjct: 238 PLHDGVIYFEDESEGVQVEVALQATTELQG-SIHAFANNINTREGGTHLTGFKTALTRVV 296
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N + + D + +L GE +REG+T +ISV+ P+P+FEGQTKT+LGN EVR VV+ ++
Sbjct: 297 NDYATDNDLLSDIEETLKGEDIREGMTAVISVKHPDPQFEGQTKTKLGNSEVRGVVESAM 356
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
+ L Y E HPDV +I+ K++ A KA AA++A +L R+KS L S++LPGKLADC +
Sbjct: 357 HQNLGTYFEEHPDVAGAIVRKAVEAAKARKAAQKAEELTRRKSALESTALPGKLADCQTK 416
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P E+E+FI EGDSAGGSAKQ R+ FQ ++ P++ I
Sbjct: 417 EPSEAELFIAEGDSAGGSAKQARNPEFQAVL-PIRGKIL 454
>gi|257388769|ref|YP_003178542.1| DNA gyrase subunit beta [Halomicrobium mukohataei DSM 12286]
gi|257171076|gb|ACV48835.1| DNA gyrase, B subunit [Halomicrobium mukohataei DSM 12286]
Length = 641
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 232/466 (49%), Positives = 331/466 (71%), Gaps = 17/466 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+EQIQVLEGL+AV+KRPAMYIGST RGLHHLVYE++DN++DEA AG+ I V
Sbjct: 4 DRDYGAEQIQVLEGLQAVQKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDEITVT 63
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ D+SVSV+D+GRGIP+D H ++ ALE ++TVLHAGGKF S Y VSGGLHGVG+
Sbjct: 64 IHEDDSVSVSDDGRGIPVDTHEKHDRPALEVIMTVLHAGGKF--DSKSYQVSGGLHGVGV 121
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V RDG + Q++ G+P L V ++ + GT+IRFWPD ++F
Sbjct: 122 SVVNALSKWLEVEVKRDGAVWKQRFDHGEPEDELE-RVRDMEPDEETGTQIRFWPDDEIF 180
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKE-DSDPEKNQYNEYFFAGGLEEYVQWLNT 312
A F ++T+A R+RELAFLN + I+L E D D E + + GG++E+VQ+LN
Sbjct: 181 E-ATDFVYSTLASRLRELAFLNSGVEISLVDERDGDSET-----FVYEGGIKEFVQYLNE 234
Query: 313 DKKPLH-DVVGFRKDV---DG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
K+PLH DV+ F + DG + +++A+Q ++ ++ +AN+I T +GG+H+ G K
Sbjct: 235 TKEPLHRDVIYFEDEEQIEDGPVQVEIAMQGTAELQG-SIHAFANNINTREGGSHMTGFK 293
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
+LTRT+N + + D D +LSGE +REGLT +IS++ P+P+FEGQTKT+LGN EVR
Sbjct: 294 TALTRTVNDYATSNGLLNDLDDTLSGEDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVR 353
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
+V+ ++ + L + E +PD ++I+ K++ A KA AAK+A +L R+KS L S++LPGK
Sbjct: 354 GIVESAMHDGLGTFFEENPDTAEAIVGKAVEAAKARKAAKKAEELTRRKSALESTALPGK 413
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
L+DC + P+++E+F+VEGDSAGGSAKQGR+ FQ I+ P++ I
Sbjct: 414 LSDCQTRDPDDAELFVVEGDSAGGSAKQGRNPEFQAIL-PIRGKIL 458
>gi|29374666|ref|NP_813818.1| DNA gyrase subunit B [Enterococcus faecalis V583]
gi|257418838|ref|ZP_05595832.1| DNA gyrase B gyrB [Enterococcus faecalis T11]
gi|29342124|gb|AAO79890.1| DNA gyrase, B subunit [Enterococcus faecalis V583]
gi|257160666|gb|EEU90626.1| DNA gyrase B gyrB [Enterococcus faecalis T11]
Length = 642
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/470 (50%), Positives = 320/470 (68%), Gaps = 19/470 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DEA AG+A +I+V
Sbjct: 5 AQEYDASQIQVLEGLEAVRKRPGMYIGSTSGEGLHHLVWEIVDNSIDEALAGFAKSIQVI 64
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ D+S++V D+GRGIP+ + T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 65 IEPDDSITVIDDGRGIPVGIQAKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGS 122
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS SL+V V++DG Y+Q+Y RG V L ++ DR GT + F PD ++F
Sbjct: 123 SVVNALSTSLDVRVYKDGKVYYQEYRRGAVVDDLKV----IEETDRHGTTVHFIPDPEIF 178
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +D + +A R+RELAFLN L I++ ED + EY + GG++ YV+ LN +
Sbjct: 179 TETTVYDFDKLATRVRELAFLNRGLHISI--EDRREGQEDKKEYHYEGGIKSYVEHLNAN 236
Query: 314 K-----KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
K +P+ + G ++D IT+++++Q+ +D Y +L +AN+I T +GGTH G K
Sbjct: 237 KDVIFPEPIF-IEGEQQD---ITVEVSMQY-TDGYHSNILSFANNIHTYEGGTHESGFKT 291
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
SLTR +N +K K +K+ D L+GE VREGLT ++S++ P+P+FEGQTKT+LGN EVR
Sbjct: 292 SLTRVINDYARKQKLMKENDEKLTGEDVREGLTAVVSIKHPDPQFEGQTKTKLGNSEVRT 351
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
V D+ EY T++L +P V I+ K + A KA LAAKRAR++ R+K L S+LPGKL
Sbjct: 352 VTDRLFSEYFTKFLMENPTVGKQIVEKGMLASKARLAAKRAREVTRRKGALEISNLPGKL 411
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
ADCSS PE+ E+FIVEGDSAGGSAKQGR R FQ I+ P++ I A
Sbjct: 412 ADCSSKDPEKCELFIVEGDSAGGSAKQGRSREFQAIL-PIRGKILNVEKA 460
>gi|312143598|ref|YP_003995044.1| DNA gyrase subunit B [Halanaerobium hydrogeniformans]
gi|311904249|gb|ADQ14690.1| DNA gyrase, B subunit [Halanaerobium hydrogeniformans]
Length = 636
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/463 (47%), Positives = 317/463 (68%), Gaps = 12/463 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++QIQVL+GLEAVRKRP MYIGSTG +GLHHLV+E++DN++DE AGY I+V +
Sbjct: 10 YNADQIQVLKGLEAVRKRPGMYIGSTGIKGLHHLVWEVVDNSIDEFLAGYGDEIKVTIHE 69
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
+N ++V D GRGIP D+H + A++ VLT LHAGGKF +S Y VSGGLHGVG+SVV
Sbjct: 70 NNEITVEDYGRGIPADIHKDSGLPAVQVVLTTLHAGGKFNNNS--YKVSGGLHGVGVSVV 127
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE L +T +G +Y Q + +G P + L + R GT IRF D +F A
Sbjct: 128 NALSEKLVLTTHWEGNKYRQVFKKGVPTSKLE----KLGKTKRSGTVIRFKADSDIFA-A 182
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+ +A R++E A+LN LT+ L E + EK + +Y GG++ +V++LN D+
Sbjct: 183 RDYKFENLAHRLQESAYLNKDLTLILIDERGEGEKKKVFQY--DGGIKAFVEFLNKDRNV 240
Query: 317 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
++ D++ F + +++A+Q+ +D Y++ + YAN+I TIDGG H+ G K +LTR +N
Sbjct: 241 INEDIIYFESKPEDYEVEMAIQY-NDGYNERIYSYANNINTIDGGYHLTGFKTALTRAIN 299
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+ K + + K SL G+ VREG+T II+V++P P+FEGQTKT+LGN E+R +V+ V
Sbjct: 300 NFAKNNNRLPAKISSLRGKDVREGITAIINVKLPEPQFEGQTKTKLGNSELRSIVESEVY 359
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
EYL+ Y + +PD+ + ++ K++ A++A A+K+AR+L ++KS L S++LPGKLADCSS
Sbjct: 360 EYLSLYFDTNPDLANKVIDKAVQAVRARKASKKARELTKRKSALNSNALPGKLADCSSKK 419
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
E+SE+FIVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 420 AEKSELFIVEGDSAGGSAKQGRDRNFQAIL-PLKGKILNVERA 461
>gi|419641349|ref|ZP_14173247.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni LMG 23357]
gi|380617606|gb|EIB36773.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni LMG 23357]
Length = 769
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/466 (46%), Positives = 311/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ + I+V
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCNTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD Q+
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGV----IGKSKKTGTTIEFWPDDQI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LNPK+TI + D ++ + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYEILAKRFRELAYLNPKITINFK----DNRVGKHESFHFEGGISQFVIDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKAIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++GE VREGL ++SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDNKITGEDVREGLIAVVSVKVPEPQFEGQTKGKLGSTYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYLT+Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|224024595|ref|ZP_03642961.1| hypothetical protein BACCOPRO_01321 [Bacteroides coprophilus DSM
18228]
gi|224017817|gb|EEF75829.1| hypothetical protein BACCOPRO_01321 [Bacteroides coprophilus DSM
18228]
Length = 656
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/470 (48%), Positives = 305/470 (64%), Gaps = 18/470 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHLVYE++DN++DEA AGY ++IEV +
Sbjct: 12 NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLVYEVVDNSIDEALAGYCTHIEVTIN 71
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+D H KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 72 EDNSITVQDNGRGIPVDFHEKEKKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 129
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTL----TCHVLPVDSKDRQGTRIRFWPDKQ 251
VNALS + V+R G Y Q+Y GKP+ + TC + GTR FWPD
Sbjct: 130 VNALSTHMTTNVFRGGKVYQQEYECGKPLYPVKEVGTC------APGMTGTRQTFWPDGN 183
Query: 252 VFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQW 309
+FT ++ ++ + R+RELA+LN +TI L + E + + F G++E+V++
Sbjct: 184 IFTVT-EYKYSILQARMRELAYLNKGITITLTDKRVKEEDGSFKQEVFHSEEGVKEFVRF 242
Query: 310 LNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
LN+ PL DV+ + GI I+ A+ + + + + + Y N+I TI+GGTH G +
Sbjct: 243 LNSTNTPLIDDVIYLNTEKQGIPIECAIMY-NTGFRENLHSYVNNINTIEGGTHEAGFRT 301
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
+LTR L ++SK ++ + +SGE REGL +ISV+V P+FEGQTKT+LGN EV
Sbjct: 302 ALTRVLKKYAEESKALEKAKVEISGEDFREGLIAVISVKVAEPQFEGQTKTKLGNNEVSG 361
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
V+Q+V E LT YLE HP I+ K + A A +AA++AR+ V++KS + LPGKL
Sbjct: 362 AVNQAVGEALTYYLEEHPKEAKVIVDKVVLAATARIAARKARESVQRKSPMGGGGLPGKL 421
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
ADCSS PEE E+F+VEGDSAGGSAKQGR R+FQ I+ PL+ I A
Sbjct: 422 ADCSSRNPEECELFLVEGDSAGGSAKQGRSRQFQAIL-PLRGKILNVEKA 470
>gi|167764147|ref|ZP_02436274.1| hypothetical protein BACSTE_02530 [Bacteroides stercoris ATCC
43183]
gi|167698263|gb|EDS14842.1| DNA gyrase, B subunit [Bacteroides stercoris ATCC 43183]
Length = 653
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/466 (47%), Positives = 312/466 (66%), Gaps = 12/466 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHLVYE++DN++DEA AGY +IEV +
Sbjct: 12 NYSASNIQVLEGLEAVRKRPAMYIGDISSKGLHHLVYEVVDNSIDEALAGYCDHIEVTIN 71
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+D H KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 72 EDNSITVQDNGRGIPVDFHEKEQKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 129
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS + V+R+G Y Q+Y G P+ + V V + GTR +FWPD +FT
Sbjct: 130 VNALSTHMTTQVFRNGKIYQQEYECGHPLYS----VKEVGTTAITGTRQQFWPDATIFTE 185
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE--YFFAGGLEEYVQWLNTD 313
+ + ++ +A R+RELA+LN + I L E Y + ++ GL+E+V+++++
Sbjct: 186 TV-YSYDILATRMRELAYLNAGIKITLTDLRVKEEDGSYKQEVFYSVEGLKEFVRYIDSS 244
Query: 314 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
++ L +DV+ + G +++A+ + + +Y++ + Y N+I TI+GGTH+ G + +LTR
Sbjct: 245 REHLVNDVIYINTEKQGTPVEVAIMYNT-SYNENIHSYVNNINTIEGGTHLAGFRRALTR 303
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
TL + +K ++ + +SG+ REGLT +IS++V P+FEGQTKT+LGN EV VDQ
Sbjct: 304 TLKKYAEDNKMLEKAKVEISGDDFREGLTAVISIKVAEPQFEGQTKTKLGNNEVMGAVDQ 363
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+V E L+ YLE HP I+ K + A +A +AA++AR+ V++KS + +PGKLADCS
Sbjct: 364 AVGEALSYYLEEHPKEAKMIVDKVILAAQARVAARKARESVQRKSPMSGGGMPGKLADCS 423
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PEE E+F+VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 424 SKDPEECELFLVEGDSAGGSAKQGRNRTFQAIL-PLRGKILNVEKA 468
>gi|422858747|ref|ZP_16905397.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK1057]
gi|327459890|gb|EGF06230.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK1057]
Length = 649
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/475 (48%), Positives = 327/475 (68%), Gaps = 11/475 (2%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
TE +++ ++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA A
Sbjct: 2 TEEKQQDIQAQEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALA 61
Query: 125 GYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 184
G+AS+I+V + DNS++V DNGRGIP+D+ T + A+ETV TVLHAGGKFGG S
Sbjct: 62 GFASHIQVFIEKDNSITVVDNGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSG 121
Query: 185 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 244
LHGVG SVVNALS L+V V+++G ++Q+Y RG V L + DR GT +
Sbjct: 122 G--LHGVGSSVVNALSTQLDVRVYKNGQIHYQEYRRGHVVADLEI----IGETDRTGTTV 175
Query: 245 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 304
F PD ++FT ++FD + R++ELAFLN L I++ + E Q +Y + GG+
Sbjct: 176 HFTPDPEIFTETVEFDFEKLNKRVQELAFLNRGLRISITDKRDGME--QAKDYHYEGGIA 233
Query: 305 EYVQWLNTDKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
YVQ++N +K + + + ++D IT+++A+Q+ + Y +T++ +AN+I T +GGTH
Sbjct: 234 SYVQYINENKDVIFETPIYTDGEMDDITVEVAMQYTT-GYHETVMSFANNIHTHEGGTHE 292
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
+G + +LTR +N KK+K +K+ + +L+GE VREGLT +ISV+ PNP+FEGQTKT+LGN
Sbjct: 293 QGFRTALTRVINDYAKKNKLLKENEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGN 352
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
EV K+ ++ E +++L +P V I+ K + A KA +AAKRAR++ R+KS L S+
Sbjct: 353 SEVVKITNRLFSEAFSDFLLENPAVARKIVEKGILASKARIAAKRAREVTRKKSGLEISN 412
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKLADCSS P+E+E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 413 LPGKLADCSSNDPQETELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 466
>gi|283956181|ref|ZP_06373666.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 1336]
gi|283792335|gb|EFC31119.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 1336]
Length = 769
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/466 (46%), Positives = 310/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I+V
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD Q+
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGV----IGKSKKTGTTIEFWPDDQI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LNPK+TI + D ++ + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYEILAKRFRELAYLNPKITINFK----DNRVGKHESFHFEGGISQFVTDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKAIFFSVDEEDMNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++GE VREGL ++SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDNKITGEDVREGLIAVVSVKVPEPQFEGQTKGKLGSTYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYLT+Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|322417549|ref|YP_004196772.1| DNA gyrase subunit B [Geobacter sp. M18]
gi|320123936|gb|ADW11496.1| DNA gyrase, B subunit [Geobacter sp. M18]
Length = 796
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/463 (49%), Positives = 318/463 (68%), Gaps = 14/463 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+++IQ+LEGLEAVRKRPAMYIGST +GLHHLVYE++DNA+DEA AGY ++V +
Sbjct: 9 YGADKIQILEGLEAVRKRPAMYIGSTAAQGLHHLVYELVDNAIDEALAGYCDAVQVTIHL 68
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D +V+V DNGRGIP D+HP +SA E VLTVLHAGGKF SS Y VSGGLHGVG SVV
Sbjct: 69 DGTVTVEDNGRGIPTDMHPTEGRSAAEVVLTVLHAGGKFDNSS--YKVSGGLHGVGSSVV 126
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS LE+ + R+G Y Q Y RG P L R+GT+I F PD ++F T
Sbjct: 127 NALSTRLELEIRRNGHLYTQSYRRGVPQAPLAI----TGETKRRGTKITFLPDGEIFETT 182
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+F + ++ R+RELAFLN + I + E ++ + +++F+ GG+ +V++LN +K
Sbjct: 183 -EFSFDILSKRLRELAFLNAGVRIKIHDERTEKD----HDFFYEGGIRSFVEYLNKNKNL 237
Query: 317 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
++ D + + + G+ I++A+Q+ +D+Y + + +AN+I T +GGTH+ G KASLTRT+N
Sbjct: 238 VNPDPIYIKGEKGGVDIEIAMQY-NDSYDEKVFSFANNINTHEGGTHLIGFKASLTRTMN 296
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+ + +K+ +++SGE +REGLT +ISV++ P+FEGQTKT+LGN EV+ V+ +
Sbjct: 297 NYATANNLLKNVKVAISGEDLREGLTAVISVKISQPQFEGQTKTKLGNSEVKGYVETLMN 356
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L YLE +P + IL KS+ A +A AA++AR+L R+K L +LPGKLADC
Sbjct: 357 EKLATYLEENPAMARKILEKSIDAARAREAARKARELTRRKGALEVGTLPGKLADCQEKD 416
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P E+F+VEGDSAGGSAKQGRDR++Q I+ PL+ I A
Sbjct: 417 PALCELFLVEGDSAGGSAKQGRDRKYQAIL-PLKGKILNVEKA 458
>gi|414160151|ref|ZP_11416422.1| DNA gyrase subunit B [Staphylococcus simulans ACS-120-V-Sch1]
gi|410878801|gb|EKS26671.1| DNA gyrase subunit B [Staphylococcus simulans ACS-120-V-Sch1]
Length = 639
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 239/461 (51%), Positives = 308/461 (66%), Gaps = 11/461 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA IEV
Sbjct: 7 TEDYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYADTIEVI 66
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 67 IEKDNWIRVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGS 124
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE+LEV V R+ Y+Q Y RG P L V + GT IRF D ++F
Sbjct: 125 SVVNALSETLEVFVHRNNKIYNQAYKRGVPQYDLKV----VGETEHTGTEIRFKADPEIF 180
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T + + + RIRELAFLN + + LR E + K + Y + GG++ YV+ +N +
Sbjct: 181 TETTTYQYELLQKRIRELAFLNKGIQLTLRDERGEEVKE--DSYHYEGGIKSYVELINEN 238
Query: 314 KKPLHDVVGFRKD-VDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+PL D + D D + +++ALQ+ S +S +L YAN+I T +GGTH +G K +LTR
Sbjct: 239 KEPLFDEPVYLHDRKDDVEVEIALQYNS-GFSTNLLSYANNIHTYEGGTHEDGFKRALTR 297
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G + +KD LSGE REGLT ++S++ NP+FEGQTKT+LGN EVR++VD+
Sbjct: 298 VLNSYGIQQGIMKDDKERLSGEDTREGLTAVVSIKHSNPQFEGQTKTKLGNSEVRQIVDR 357
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E + +L HP V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 358 LFTEDMERFLLEHPQVARIIVEKGMMASRARIAAKKAREVTRRKSALEVSSLPGKLADCS 417
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
S PEESEIFIVEGDSAGGS K GRD R Q I+ PL+ I
Sbjct: 418 SKNPEESEIFIVEGDSAGGSTKLGRDSRTQAIL-PLRGKIL 457
>gi|88597733|ref|ZP_01100966.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 84-25]
gi|218561696|ref|YP_002343475.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni NCTC 11168
= ATCC 700819]
gi|317510176|ref|ZP_07967648.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 305]
gi|384447323|ref|YP_005655374.1| DNA gyrase B subunit [Campylobacter jejuni subsp. jejuni IA3902]
gi|403054819|ref|YP_006632224.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni NCTC
11168-BN148]
gi|415729843|ref|ZP_11472673.1| DNA gyrase B subunit [Campylobacter jejuni subsp. jejuni DFVF1099]
gi|9297098|sp|O87667.2|GYRB_CAMJE RecName: Full=DNA gyrase subunit B
gi|88190037|gb|EAQ94013.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 84-25]
gi|112359402|emb|CAL34184.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni NCTC 11168
= ATCC 700819]
gi|284925306|gb|ADC27658.1| DNA gyrase B subunit [Campylobacter jejuni subsp. jejuni IA3902]
gi|315928458|gb|EFV07770.1| DNA gyrase B subunit [Campylobacter jejuni subsp. jejuni DFVF1099]
gi|315930330|gb|EFV09418.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 305]
gi|401780471|emb|CCK66161.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni NCTC
11168-BN148]
Length = 769
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/466 (46%), Positives = 310/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I+V
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD Q+
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGV----IGKSKKTGTTIEFWPDDQI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LNPK+TI + D ++ + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYEILAKRFRELAYLNPKITINFK----DNRVGKHESFHFEGGISQFVTDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKAIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++G+ VREGL I+SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDNKITGDDVREGLIAIVSVKVPEPQFEGQTKGKLGSTYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYLT+Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|227873174|ref|ZP_03991465.1| DNA topoisomerase (ATP-hydrolyzing) [Oribacterium sinus F0268]
gi|227841005|gb|EEJ51344.1| DNA topoisomerase (ATP-hydrolyzing) [Oribacterium sinus F0268]
Length = 654
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 237/483 (49%), Positives = 322/483 (66%), Gaps = 15/483 (3%)
Query: 62 SIATEAFKENPV-----SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILD 116
SI E F N SK YG++QIQ+LEGLEAVRKRP MYIGST RGLHHLVYEI+D
Sbjct: 2 SIEMEEFGGNESEFLHGSKEYGADQIQILEGLEAVRKRPGMYIGSTSVRGLHHLVYEIVD 61
Query: 117 NAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFG 176
N+VDEA AG+ + I V + +NS++V DNGRGIP+D+ KSALE V TVLHAGGKFG
Sbjct: 62 NSVDEALAGFCNTITVKIHQNNSITVRDNGRGIPVDIQKKAGKSALEVVFTVLHAGGKFG 121
Query: 177 GSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDS 236
G+ GY VSGGLHGVG SVVNALSE L+V V+++G Y +++GK + C + S
Sbjct: 122 GA--GYKVSGGLHGVGASVVNALSEWLDVKVYKEGKIYTMSFAKGKVTKPIEC--IGTCS 177
Query: 237 KDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE 296
++ QGT + F PD +F ++ +D T+ R+RE AFL L I L E EK + E
Sbjct: 178 EEEQGTEVHFLPDASIFEESV-YDFETLKIRLRETAFLTKNLKIRLVDEREGQEKEK--E 234
Query: 297 YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIR 355
+ + GG++E+V +LN K+ L+ DV+ + + I +++A+Q +D+Y++ + + N+I
Sbjct: 235 FHYEGGIQEFVTFLNKGKEALYPDVIYCEGEKEKILVEVAMQH-NDSYTENIYTFVNNIN 293
Query: 356 TIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEG 415
T +GGTH+ G K +LT+T N +++K +KD + +LSGE +REGLTCIISV++ +P+FEG
Sbjct: 294 TPEGGTHLTGFKNALTKTFNDYARQNKLLKDSEANLSGEDIREGLTCIISVKIEDPQFEG 353
Query: 416 QTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQ 475
QTK +LG E + V V E LT +LE +P V I KS+ A +A AA++ARDL R+
Sbjct: 354 QTKQKLGTSEAQVAVQGIVSEQLTYFLEQNPAVAKVICEKSILAQRARAAARKARDLTRR 413
Query: 476 KSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAF 535
KS L LPGKLADCSS PE EIFIVEGDSA G AK+GR+ Q ++ PL+ +
Sbjct: 414 KSALDGVGLPGKLADCSSKDPERCEIFIVEGDSALGPAKEGRNPETQAVL-PLRGKVLNV 472
Query: 536 ASA 538
A
Sbjct: 473 QKA 475
>gi|415883916|ref|ZP_11545945.1| DNA gyrase subunit B [Bacillus methanolicus MGA3]
gi|387591711|gb|EIJ84028.1| DNA gyrase subunit B [Bacillus methanolicus MGA3]
Length = 640
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 243/466 (52%), Positives = 318/466 (68%), Gaps = 12/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+TY + QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY + I V
Sbjct: 8 EQTYDANQIQVLEGLEAVRKRPGMYIGSTSAKGLHHLVWEIVDNSIDEALAGYCTEINVT 67
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++V DNGRGIP+ + + A+E +LTVLHAGGKFGG S LHGVG
Sbjct: 68 IEKDNSITVVDNGRGIPVGIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGA 125
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS LEV V RDG ++QKY RG P L + DR GT IRF PD ++F
Sbjct: 126 SVVNALSTELEVFVHRDGKIHYQKYERGVPCEDLKV----IGETDRTGTTIRFKPDGEIF 181
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T ++FD+ T+A R+RELAFLN + I + ED E N+ NEY++ GG++ YV+ LN
Sbjct: 182 TETLEFDYETLANRLRELAFLNRGIRITI--EDKRVE-NKRNEYYYEGGIKSYVEHLNRT 238
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
++ LH+ + + DGIT+++ALQ+ +D ++ + +AN+I T +GGTH G K +LTR
Sbjct: 239 REVLHEEPIYMEGEKDGITVEVALQY-NDGFTSNIYSFANNIHTYEGGTHESGFKTALTR 297
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N +K +K+ D +LSGE VREGLT I+S++ P+P+FEGQTKT+LGN EVR V D
Sbjct: 298 VINDYARKYGIIKENDANLSGEDVREGLTAIVSIKHPDPQFEGQTKTKLGNSEVRAVTDT 357
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E +L +P V I+ K L A +A LAAK+AR+L R+K+ L SSLPGKLADCS
Sbjct: 358 IFAENFETFLLENPSVARKIVEKGLMAARARLAAKKARELTRRKNALDVSSLPGKLADCS 417
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P SE+++VEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 418 SKDPSISELYVVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 462
>gi|422879137|ref|ZP_16925603.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK1059]
gi|422928983|ref|ZP_16961925.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis ATCC 29667]
gi|422931953|ref|ZP_16964884.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK340]
gi|332366316|gb|EGJ44068.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK1059]
gi|339615669|gb|EGQ20340.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis ATCC 29667]
gi|339619386|gb|EGQ23967.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK340]
Length = 649
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/475 (48%), Positives = 327/475 (68%), Gaps = 11/475 (2%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
TE +++ ++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA A
Sbjct: 2 TEEKQQDIQAQEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALA 61
Query: 125 GYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 184
G+AS+I+V + DNS++V DNGRGIP+D+ T + A+ETV TVLHAGGKFGG S
Sbjct: 62 GFASHIQVFIEKDNSITVVDNGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSG 121
Query: 185 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 244
LHGVG SVVNALS L+V V+++G ++Q+Y RG V L + DR GT +
Sbjct: 122 G--LHGVGSSVVNALSTQLDVRVYKNGQIHYQEYRRGHVVADLEI----IGETDRTGTTV 175
Query: 245 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 304
F PD ++FT ++FD + R++ELAFLN L I++ + E Q +Y + GG+
Sbjct: 176 HFTPDPEIFTETVEFDFEKLNKRVQELAFLNRGLRISITDKRDGME--QVKDYHYEGGIA 233
Query: 305 EYVQWLNTDKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
YVQ++N +K + + + ++D IT+++A+Q+ + Y +T++ +AN+I T +GGTH
Sbjct: 234 SYVQYINENKDVIFETPIYTDGEMDDITVEVAMQYTT-GYHETVMSFANNIHTHEGGTHE 292
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
+G + +LTR +N KK+K +K+ + +L+GE VREGLT +ISV+ PNP+FEGQTKT+LGN
Sbjct: 293 QGFRTALTRVINDYAKKNKLLKENEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGN 352
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
EV K+ ++ E +++L +P V I+ K + A KA +AAKRAR++ R+KS L S+
Sbjct: 353 SEVVKITNRLFSEAFSDFLLENPAVARKIVEKGILASKARIAAKRAREVTRKKSGLEISN 412
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKLADCSS P+E+E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 413 LPGKLADCSSNDPQETELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 466
>gi|393809335|gb|AFN25841.1| DNA gyrase subunit B [Staphylococcus hominis]
Length = 644
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 242/466 (51%), Positives = 321/466 (68%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 71 IENDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V + YHQ Y +G P L + S D+ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHLNETIYHQAYKKGVPQFDLK----EIGSTDKTGTVIRFKADSEIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
+ +++ T+ RIRELAFLN ++I LR E D E+ + Y + GG++ YV+ LN +
Sbjct: 185 SETTVYNYETLQKRIRELAFLNKGISITLRDEREDEEQREDT-YHYEGGIKSYVELLNEN 243
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTR 302
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G +SK +KD LSGE REGLT ++S++ NP+FEGQTKT+LGN EVR++VD+
Sbjct: 303 VLNSYGTQSKIIKDDKERLSGEDTREGLTAVVSIKHGNPQFEGQTKTKLGNSEVRQIVDR 362
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P+V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPNVARIIVEKGIMASRARVAAKKAREVTRRKSALEISSLPGKLADCS 422
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P+ESEIF+VEGDSAGGS K+GRD + Q I+ PL+ I A
Sbjct: 423 SKNPDESEIFLVEGDSAGGSTKEGRDSKTQAIL-PLRGKILNVEKA 467
>gi|422853984|ref|ZP_16900648.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK160]
gi|325696789|gb|EGD38677.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK160]
Length = 649
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/475 (48%), Positives = 327/475 (68%), Gaps = 11/475 (2%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
TE +++ ++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA A
Sbjct: 2 TEEKQQDIQAQEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALA 61
Query: 125 GYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 184
G+AS+I+V + DNS++V DNGRGIP+D+ T + A+ETV TVLHAGGKFGG S
Sbjct: 62 GFASHIQVFIEKDNSITVVDNGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSG 121
Query: 185 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 244
LHGVG SVVNALS L+V V+++G ++Q+Y RG V L + DR GT +
Sbjct: 122 G--LHGVGSSVVNALSTQLDVRVYKNGQIHYQEYRRGHVVADLEI----IGETDRTGTTV 175
Query: 245 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 304
F PD ++FT ++FD + R++ELAFLN L I++ + E Q +Y + GG+
Sbjct: 176 HFTPDPEIFTETVEFDFEKLNKRVQELAFLNRGLRISITDKRDGME--QVKDYHYEGGIA 233
Query: 305 EYVQWLNTDKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
YVQ++N +K + + + ++D IT+++A+Q+ + Y +T++ +AN+I T +GGTH
Sbjct: 234 SYVQYINENKDVIFETPIYTDGEMDDITVEVAMQYTT-GYHETVMSFANNIHTHEGGTHE 292
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
+G + +LTR +N KK+K +K+ + +L+GE VREGLT +ISV+ PNP+FEGQTKT+LGN
Sbjct: 293 QGFRTALTRVINDYAKKNKLLKENEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGN 352
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
EV K+ ++ E +++L +P V I+ K + A KA +AAKRAR++ R+KS L S+
Sbjct: 353 SEVVKITNRLFSEAFSDFLLENPAVARKIVEKGILASKARIAAKRAREVTRKKSGLEISN 412
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKLADCSS P+E+E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 413 LPGKLADCSSNDPQETELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 466
>gi|419636652|ref|ZP_14168844.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni LMG 9879]
gi|419651471|ref|ZP_14182567.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 2008-894]
gi|419683268|ref|ZP_14211974.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 1213]
gi|380617068|gb|EIB36251.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni LMG 9879]
gi|380631070|gb|EIB49280.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 2008-894]
gi|380659596|gb|EIB75570.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 1213]
Length = 769
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/466 (46%), Positives = 310/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I+V
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD Q+
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGV----IGKSKKTGTTIEFWPDDQI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LNPK+TI + D ++ + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYEILAKRFRELAYLNPKITINFK----DNRVGKHESFHFEGGISQFVTDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKAIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++G+ VREGL I+SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDNKITGDDVREGLIAIVSVKVPEPQFEGQTKGKLGSTYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYLT+Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|125717721|ref|YP_001034854.1| DNA gyrase subunit B [Streptococcus sanguinis SK36]
gi|323351846|ref|ZP_08087497.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis VMC66]
gi|422821500|ref|ZP_16869693.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK353]
gi|422823861|ref|ZP_16872049.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK405]
gi|422826073|ref|ZP_16874252.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK678]
gi|422848944|ref|ZP_16895620.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK115]
gi|422851900|ref|ZP_16898570.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK150]
gi|422855797|ref|ZP_16902455.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK1]
gi|422862883|ref|ZP_16909515.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK408]
gi|422884455|ref|ZP_16930904.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK49]
gi|125497638|gb|ABN44304.1| DNA gyrase, putative [Streptococcus sanguinis SK36]
gi|322121903|gb|EFX93635.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis VMC66]
gi|324990928|gb|EGC22863.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK353]
gi|324993188|gb|EGC25108.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK405]
gi|324995509|gb|EGC27421.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK678]
gi|325689965|gb|EGD31969.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK115]
gi|325694221|gb|EGD36137.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK150]
gi|327461458|gb|EGF07789.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK1]
gi|327473763|gb|EGF19181.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK408]
gi|332359588|gb|EGJ37406.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK49]
Length = 649
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/475 (48%), Positives = 327/475 (68%), Gaps = 11/475 (2%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
TE +++ ++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA A
Sbjct: 2 TEEKQQDIQAQEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALA 61
Query: 125 GYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 184
G+AS+I+V + DNS++V DNGRGIP+D+ T + A+ETV TVLHAGGKFGG S
Sbjct: 62 GFASHIQVFIEKDNSITVVDNGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSG 121
Query: 185 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 244
LHGVG SVVNALS L+V V+++G ++Q+Y RG V L + DR GT +
Sbjct: 122 G--LHGVGSSVVNALSTQLDVRVYKNGQIHYQEYRRGHVVADLEI----IGETDRTGTTV 175
Query: 245 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 304
F PD ++FT ++FD + R++ELAFLN L I++ + E Q +Y + GG+
Sbjct: 176 HFTPDPEIFTETVEFDFEKLNKRVQELAFLNRGLRISITDKRDGME--QVKDYHYEGGIA 233
Query: 305 EYVQWLNTDKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
YVQ++N +K + + + ++D IT+++A+Q+ + Y +T++ +AN+I T +GGTH
Sbjct: 234 SYVQYINENKDVIFETPIYTDGEMDDITVEVAMQYTT-GYHETVMSFANNIHTHEGGTHE 292
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
+G + +LTR +N KK+K +K+ + +L+GE VREGLT +ISV+ PNP+FEGQTKT+LGN
Sbjct: 293 QGFRTALTRVINDYAKKNKLLKENEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGN 352
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
EV K+ ++ E +++L +P V I+ K + A KA +AAKRAR++ R+KS L S+
Sbjct: 353 SEVVKITNRLFSEAFSDFLLENPAVARKIVEKGILASKARIAAKRAREVTRKKSGLEISN 412
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKLADCSS P+E+E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 413 LPGKLADCSSNDPQETELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 466
>gi|445061818|ref|ZP_21374304.1| DNA gyrase subunit B [Brachyspira hampsonii 30599]
gi|444506805|gb|ELV07081.1| DNA gyrase subunit B [Brachyspira hampsonii 30599]
Length = 636
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/465 (49%), Positives = 305/465 (65%), Gaps = 12/465 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
KTY S+ IQVLEGL+ VRKRP MYIGSTG +GLHHLVYE++DN++DEA AGY NI V +
Sbjct: 5 KTYSSKNIQVLEGLDPVRKRPGMYIGSTGAQGLHHLVYEVVDNSIDEAMAGYCKNITVTI 64
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DN + V D+GRGIP+D+HP SALE V+T LHAGGKF + Y VSGGLHGVG+S
Sbjct: 65 EKDNIIKVEDDGRGIPVDMHPKLKISALEVVMTKLHAGGKFDNET--YKVSGGLHGVGVS 122
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS L V +DG Y Q Y RG P V V + + GT + F D +F
Sbjct: 123 VVNALSTELIAEVNKDGKLYRQVYHRGVPEEP----VKEVGTSTKTGTTVTFKADADIFE 178
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
T I +D+ +A R+RELAFLN + I L D + NE+++ GG+E ++ LN +K
Sbjct: 179 TTI-YDYKILANRLRELAFLNRGIRITL--TDKREAEVVSNEFYYEGGIEMFITHLNENK 235
Query: 315 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
K LHD + K D +++A+Q+ DAY++ + Y N+I T +GGTH+ G + +LTR
Sbjct: 236 KALHDKPIYLHKTEDKTDVEVAMQYV-DAYNENIFTYCNNINTTEGGTHLVGFRTALTRV 294
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
KK + K I+ GE REGL ++SV++PNP+FEGQTKT+LGN EVR V ++
Sbjct: 295 YTDFAKKLELDKKNKITFMGEDTREGLVAVVSVKIPNPQFEGQTKTKLGNTEVRAVTEKL 354
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
V E L +Y +P V+ +IL K +SA +A AA++ARDL R+K+ L S SLPGKLADCS
Sbjct: 355 VVEGLNDYFSQNPKVIKAILEKIISAAQAREAARKARDLARRKNALESDSLPGKLADCSE 414
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
++ E+++VEGDSAGG+AK GRDR FQ I+ PL+ + A
Sbjct: 415 QEVDKCEVYLVEGDSAGGTAKGGRDRHFQAIL-PLRGKVLNVEKA 458
>gi|62185121|ref|YP_219906.1| DNA gyrase subunit B [Chlamydophila abortus S26/3]
gi|62148188|emb|CAH63945.1| DNA gyrase subunit B [Chlamydophila abortus S26/3]
Length = 806
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 232/475 (48%), Positives = 312/475 (65%), Gaps = 22/475 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
K Y + I VLEGL+AVR+RP MYIG TG GLHHLVYE++DN++DEA AGY S I V +
Sbjct: 6 KNYDASAITVLEGLQAVRERPGMYIGDTGITGLHHLVYEVVDNSIDEAMAGYCSEIHVRI 65
Query: 135 LADNSVSVADNGRGIPIDLHPATNK------SALETVLTVLHAGGKFGGSSSGYSVSGGL 188
L D ++++DNGRGIPI H +K SALE VLTVLHAGGKF S Y VSGGL
Sbjct: 66 LEDGGITISDNGRGIPIQTHEKESKKQGRDVSALEVVLTVLHAGGKFDKDS--YKVSGGL 123
Query: 189 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 248
HGVG+S VNAL+E L TV++D Y ++SRG PVT+L C + + ++QGT I F+P
Sbjct: 124 HGVGVSCVNALAEKLVATVYKDKQAYQMEFSRGVPVTSLQC----LGATNKQGTEITFYP 179
Query: 249 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQ 308
D ++F++ + FD + + R+RELAFLN +TI ++D D ++ +F+ GG++ +V
Sbjct: 180 DNKIFSSCV-FDRSILIKRLRELAFLNRGVTIIF-EDDRDVSFDKV-VFFYEGGIQSFVS 236
Query: 309 WLNTDKKPLHD----VVGFRKDVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
+LN +K+ L + G R DG I + ALQW S YS+ + YAN+I T GGTH+
Sbjct: 237 YLNQNKESLFPEPIYISGSRTGDDGEIEFEAALQWNS-GYSELIYSYANNIPTRQGGTHL 295
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
G +LTR LN+ K K+ +SL+GE +REGLT ++SV+VPNP+FEGQTK +LGN
Sbjct: 296 TGFSTALTRVLNAYIKAHNLAKNDKLSLTGEDIREGLTAVVSVKVPNPQFEGQTKQKLGN 355
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
+V V Q E LT + + +P + I+ K A +A AAK+AR+L +KS L S+
Sbjct: 356 SDVGSVSQQITGEALTIFFDENPQIAKMIVDKVFIAAQAREAAKKARELTLRKSALDSAR 415
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKL DC P + E++IVEGDSAGGSAKQGRDRRFQ I+ P++ I A
Sbjct: 416 LPGKLIDCLEKDPAKCEMYIVEGDSAGGSAKQGRDRRFQAIL-PIRGKILNVEKA 469
>gi|258513372|ref|YP_003189594.1| DNA gyrase subunit B [Desulfotomaculum acetoxidans DSM 771]
gi|257777077|gb|ACV60971.1| DNA gyrase, B subunit [Desulfotomaculum acetoxidans DSM 771]
Length = 635
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 237/467 (50%), Positives = 328/467 (70%), Gaps = 14/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+++ YG+E+IQVLEGLEAVR+RP MYIGSTG +GLHHLVYE++DN++DEA AGY +IEV
Sbjct: 5 ITERYGAEEIQVLEGLEAVRRRPGMYIGSTGAKGLHHLVYEVVDNSIDEAMAGYCDHIEV 64
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V DNGRGIP+D+H T SA+E V+T LHAGGKFGG S LHGVG
Sbjct: 65 FINEDNSITVTDNGRGIPVDIHSKTGNSAVELVMTTLHAGGKFGGGGYKVSGG--LHGVG 122
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ LEV V R G + Q+Y RG PV+ L V GT+I F PD+++
Sbjct: 123 VSVVNALSKWLEVEVRRQGKIFFQRYERGIPVSDLKI----VGDSSFTGTKITFSPDEEI 178
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F I F T+ R++ELA+LN ++ I L+ D N Y + GG++++V +N
Sbjct: 179 FEDVI-FSRETLEQRLQELAYLNSRVKIYLK----DFINNLEFSYMYEGGIKDFVAHINQ 233
Query: 313 DKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
DK L + + F ++ D + +++A+Q+ +DAY + + Y N+I TIDGGTH G +++LT
Sbjct: 234 DKILLPEAPLYFVREKDHVMVEVAMQY-TDAYFENLFSYVNNIHTIDGGTHEAGFRSALT 292
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R +N KK+ +K+ + +LSGE +REGLT +IS++VP P+FEGQTK +LGN EVR +VD
Sbjct: 293 RVINDYAKKNNLIKNNEGNLSGEDIREGLTAVISIKVPEPQFEGQTKGKLGNSEVRGIVD 352
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E L+ +LE +P V I+ KS+SA +A AA++AR+L R+K+VL SS+LPGKL+DC
Sbjct: 353 SVVAEGLSTFLEENPAVSKKIIEKSISAFRAREAARKARELTRRKNVLESSTLPGKLSDC 412
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S+ P ESE+++VEGDSAGGSAKQGRDR+FQ I+ PL+ I A
Sbjct: 413 SNRDPSESELYLVEGDSAGGSAKQGRDRKFQAIL-PLKGKILNVEKA 458
>gi|448649276|ref|ZP_21679989.1| DNA gyrase subunit B [Haloarcula californiae ATCC 33799]
gi|445773920|gb|EMA24949.1| DNA gyrase subunit B [Haloarcula californiae ATCC 33799]
Length = 642
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/466 (49%), Positives = 322/466 (69%), Gaps = 17/466 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S YG++ IQ LEGLEAV+KRPAMYIGST RGLHHLVYE++DNA+DEA AGY NI+V
Sbjct: 5 SDEYGAKSIQTLEGLEAVQKRPAMYIGSTDARGLHHLVYEVVDNAIDEALAGYCDNIDVT 64
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ D SVSV+D+GRGIP+D H + A+E V+T+LHAGGKF S Y VSGGLHGVG+
Sbjct: 65 IHDDGSVSVSDDGRGIPVDTHEEHGRPAVEVVMTILHAGGKFDNKS--YQVSGGLHGVGV 122
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V RDG + Q++ GKP L V + + GT +RFWPD ++F
Sbjct: 123 SVVNALSKWLEVEVRRDGALWKQRFDHGKPEYDLK-KVRDLKPDEETGTTVRFWPDDEIF 181
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNT 312
T +F +T++ R+RELAFLN + I++ D E++ E F + GG+ E+V++LN
Sbjct: 182 ETG-EFKFSTLSSRLRELAFLNSGVAISI-----DDERDGETETFAYDGGIREFVEYLNE 235
Query: 313 DKKPLH-DVVGFRKDVD----GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
K PLH D++ F + + + +++A+Q D ++ +AN+I T +GGTH+ G K
Sbjct: 236 TKDPLHRDIIYFEDEEEIAEGPVQVEIAMQGTDDLQG-SIHAFANNINTREGGTHLTGFK 294
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
SLTR +N + +KD D +L G+ +REGLT +ISV+ P+P+FEGQTKT+LGN EVR
Sbjct: 295 TSLTRVINDYATDNNLLKDLDDTLKGDDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVR 354
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
+V+ ++ + L + E +PD ++I+ K++ A KA AA++A +L R+KS L S++LPGK
Sbjct: 355 GIVESAMHDGLATFFEENPDTAEAIVGKAVEAAKARKAAQKAEELTRRKSALDSTALPGK 414
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LADC + PEE+E+FI EGDSAGGSAKQGR+ FQ I+ P++ I
Sbjct: 415 LADCQTRDPEEAELFIAEGDSAGGSAKQGRNPDFQAIL-PIKGKIL 459
>gi|402300224|ref|ZP_10819751.1| DNA gyrase subunit B [Bacillus alcalophilus ATCC 27647]
gi|401724614|gb|EJS97959.1| DNA gyrase subunit B [Bacillus alcalophilus ATCC 27647]
Length = 641
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 233/467 (49%), Positives = 313/467 (67%), Gaps = 16/467 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
++Y + QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AG+ I+V +
Sbjct: 10 QSYDASQIQVLEGLEAVRKRPGMYIGSTSARGLHHLVWEIVDNSIDEAMAGFCDQIDVLI 69
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DNS++V DNGRGIP+ +H + A+E ++TVLHAGGKFGG S LHGVG S
Sbjct: 70 EEDNSITVIDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGAS 127
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS LEV + RDG YHQKY +G P L + + GT+ F PD ++F
Sbjct: 128 VVNALSTMLEVEIERDGNLYHQKYHQGVPAADLAI----IGKSENSGTKTHFKPDPEIFQ 183
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIAL--RKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
I +D++T+A R+RELAFLN LTI + ++ED K Y++ GG+ +V+ LN
Sbjct: 184 ETIVYDYDTLALRLRELAFLNKGLTITITDKREDGKSAK-----YYYEGGIASFVKHLNR 238
Query: 313 DKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
K+ LHD + + DG+ +++A+Q+ +D Y + +AN+I T +GGTH G K +LT
Sbjct: 239 TKEVLHDEPIHIEGEKDGLNVEVAVQY-NDGYVGNLYSFANNISTHEGGTHESGFKTALT 297
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R +N +K+ VK+ D +L+G+ VREGLT IISV++P+P+FEGQTKT+LGN E R + D
Sbjct: 298 RVINDYARKNSLVKENDPNLTGDDVREGLTAIISVKIPDPQFEGQTKTKLGNSEARTITD 357
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
E+ + +L +P V I+ K L A +A AAK+AR+L R+KS L S+LPGKLADC
Sbjct: 358 SLFSEHFSRFLIENPQVARKIVEKGLMASRAREAAKKARELTRRKSALEVSALPGKLADC 417
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
+S SEI+IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 418 ASKDASISEIYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKIINVEKA 463
>gi|419667855|ref|ZP_14197807.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 1997-10]
gi|380645221|gb|EIB62285.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 1997-10]
Length = 769
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/466 (46%), Positives = 310/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I+V
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD Q+
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGV----IGKSKKTGTTIEFWPDDQI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LNPK+TI + D ++ + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYEILAKRFRELAYLNPKITINFK----DNRVGKHESFHFEGGISQFVTDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKAIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++G+ VREGL I+SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDNKITGDDVREGLIAIVSVKVPEPQFEGQTKGKLGSTYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYLT+Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|148926822|ref|ZP_01810501.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni CG8486]
gi|419646792|ref|ZP_14178247.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 53161]
gi|419648566|ref|ZP_14179902.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni LMG 9217]
gi|419650475|ref|ZP_14181694.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 2008-1025]
gi|419661687|ref|ZP_14192007.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 2008-831]
gi|419673780|ref|ZP_14203233.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 51037]
gi|419676869|ref|ZP_14206032.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 87330]
gi|419695654|ref|ZP_14223544.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni LMG 23210]
gi|145844547|gb|EDK21654.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni CG8486]
gi|380622930|gb|EIB41662.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 53161]
gi|380626215|gb|EIB44704.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni LMG 9217]
gi|380628470|gb|EIB46781.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 2008-1025]
gi|380639487|gb|EIB56974.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 2008-831]
gi|380653082|gb|EIB69528.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 51037]
gi|380655544|gb|EIB71857.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 87330]
gi|380677859|gb|EIB92719.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni LMG 23210]
Length = 769
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/466 (46%), Positives = 310/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I+V
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD Q+
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGV----IGKSKKTGTTIEFWPDDQI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LNPK+TI + D ++ + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYEILAKRFRELAYLNPKITINFK----DNRVGKHESFHFEGGISQFVTDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKAIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++G+ VREGL I+SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDNKITGDDVREGLIAIVSVKVPEPQFEGQTKGKLGSTYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYLT+Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|55377342|ref|YP_135192.1| DNA gyrase subunit B [Haloarcula marismortui ATCC 43049]
gi|448640227|ref|ZP_21677281.1| DNA gyrase subunit B [Haloarcula sinaiiensis ATCC 33800]
gi|55230067|gb|AAV45486.1| DNA gyrase subunit B [Haloarcula marismortui ATCC 43049]
gi|445762017|gb|EMA13251.1| DNA gyrase subunit B [Haloarcula sinaiiensis ATCC 33800]
Length = 642
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/466 (49%), Positives = 322/466 (69%), Gaps = 17/466 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S YG++ IQ LEGLEAV+KRPAMYIGST RGLHHLVYE++DNA+DEA AGY NI+V
Sbjct: 5 SDEYGAKSIQTLEGLEAVQKRPAMYIGSTDARGLHHLVYEVVDNAIDEALAGYCDNIDVT 64
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ D SVSV+D+GRGIP+D H + A+E V+T+LHAGGKF S Y VSGGLHGVG+
Sbjct: 65 IHDDGSVSVSDDGRGIPVDTHEEHGRPAVEVVMTILHAGGKFDNKS--YQVSGGLHGVGV 122
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V RDG + Q++ GKP L V + + GT +RFWPD ++F
Sbjct: 123 SVVNALSKWLEVEVRRDGALWKQRFDHGKPEYDLK-KVRDLKPDEETGTTVRFWPDDEIF 181
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNT 312
T +F +T++ R+RELAFLN + I++ D E++ E F + GG+ E+V++LN
Sbjct: 182 ETG-EFKFSTLSSRLRELAFLNSGVAISI-----DDERDGETETFAYDGGIREFVEYLNE 235
Query: 313 DKKPLH-DVVGFRKDVD----GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
K PLH D++ F + + + +++A+Q D ++ +AN+I T +GGTH+ G K
Sbjct: 236 TKDPLHRDIIYFEDEEEIAEGPVQVEIAMQGTDDLQG-SIHAFANNINTREGGTHLTGFK 294
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
SLTR +N + +KD D +L G+ +REGLT +ISV+ P+P+FEGQTKT+LGN EVR
Sbjct: 295 TSLTRVINDYATDNNLLKDLDDTLKGDDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVR 354
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
+V+ ++ + L + E +PD ++I+ K++ A KA AA++A +L R+KS L S++LPGK
Sbjct: 355 GIVESAMHDGLATFFEENPDTAEAIVGKAVEAAKARKAAQKAEELTRRKSALDSTALPGK 414
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LADC + PEE+E+FI EGDSAGGSAKQGR+ FQ I+ P++ I
Sbjct: 415 LADCQTRDPEEAELFIAEGDSAGGSAKQGRNPDFQAIL-PIKGKIL 459
>gi|419665132|ref|ZP_14195206.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 1997-7]
gi|419675399|ref|ZP_14204667.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 110-21]
gi|419686583|ref|ZP_14215012.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 1798]
gi|419691891|ref|ZP_14219998.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 1928]
gi|380644066|gb|EIB61269.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 1997-7]
gi|380651775|gb|EIB68301.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 110-21]
gi|380663991|gb|EIB79607.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 1798]
gi|380671358|gb|EIB86577.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 1928]
Length = 769
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/466 (46%), Positives = 310/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I+V
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD Q+
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGV----IGKSKKTGTTIEFWPDDQI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LNPK+TI + D ++ + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYEILAKRFRELAYLNPKITINFK----DNRVGKHESFHFEGGISQFVTDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKAIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++G+ VREGL I+SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDNKITGDDVREGLIAIVSVKVPEPQFEGQTKGKLGSTYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYLT+Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|86150547|ref|ZP_01068771.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni CF93-6]
gi|86152360|ref|ZP_01070570.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 260.94]
gi|121612557|ref|YP_999722.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 81-176]
gi|167004699|ref|ZP_02270457.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 81-176]
gi|315123619|ref|YP_004065623.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|419627082|ref|ZP_14159994.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni LMG 23263]
gi|419659818|ref|ZP_14190330.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 2008-979]
gi|419688990|ref|ZP_14217299.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 1854]
gi|424846537|ref|ZP_18271131.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni NW]
gi|85838999|gb|EAQ56264.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni CF93-6]
gi|85840657|gb|EAQ57909.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 260.94]
gi|87249029|gb|EAQ71991.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 81-176]
gi|315017341|gb|ADT65434.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|356485835|gb|EHI15822.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni NW]
gi|380607274|gb|EIB27146.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni LMG 23263]
gi|380638534|gb|EIB56088.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 2008-979]
gi|380664258|gb|EIB79864.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 1854]
Length = 769
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/466 (46%), Positives = 310/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I+V
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD Q+
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGV----IGKSKKTGTTIEFWPDDQI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LNPK+TI + D ++ + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYEILAKRFRELAYLNPKITINFK----DNRVGKHESFHFEGGISQFVIDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKAIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++GE VREGL ++SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDNKITGEDVREGLIAVVSVKVPEPQFEGQTKGKLGSTYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYLT+Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|419621479|ref|ZP_14154731.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni LMG 23216]
gi|380601789|gb|EIB22095.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni LMG 23216]
Length = 769
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/466 (46%), Positives = 310/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ + I+V
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCNTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDIHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD Q+
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGV----IGKSKKTGTTIEFWPDDQI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LNPK+TI + D ++ + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYEILAKRFRELAYLNPKITINFK----DNRVGKHESFHFEGGISQFVTDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ + + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKAIFFSVDEEDVNVEVALLY-NDTYSENLFSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++GE VREGL ++SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDNKITGEDVREGLIAVVSVKVPEPQFEGQTKGKLGSTYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYLT+Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|315640352|ref|ZP_07895468.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus
italicus DSM 15952]
gi|315483888|gb|EFU74368.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus
italicus DSM 15952]
Length = 649
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/466 (50%), Positives = 317/466 (68%), Gaps = 11/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DEA AG+A+ IEV
Sbjct: 12 AKEYDASQIQVLEGLEAVRKRPGMYIGSTSSEGLHHLVWEIVDNSIDEALAGFATKIEVV 71
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++V D+GRGIP+D+ T + A+ETV TVLHAGGK GY VSGGLHGVG
Sbjct: 72 VEKDNSITVTDDGRGIPVDIQAKTGRPAVETVFTVLHAGGK--FGGGGYKVSGGLHGVGS 129
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS +L+V V+++G Y Q+Y RG V+ LT + DR GT + F PD ++F
Sbjct: 130 SVVNALSTTLDVKVFKEGKVYFQEYHRGAVVSDLTI----IGETDRHGTEVHFVPDPEIF 185
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
F+ +A R+RELAFLN L I++ ED E+ + + F GG++ YV+ LN
Sbjct: 186 RETTTFEFEKLATRVRELAFLNRGLHISI--EDKRKEEAEVRAFHFEGGIKSYVEHLNAT 243
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K L + + + I++++++Q+ +D Y +L +AN+I T +GGTH G K +LTR
Sbjct: 244 KTVLFPEPIYLEGNQQDISVEVSMQY-TDGYHTNLLSFANNIHTYEGGTHESGFKTALTR 302
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N +K K +++ D +LSGE VREGLT +IS++ P+P+FEGQTKT+LGN EVR V D+
Sbjct: 303 VINDYARKQKLMRESDENLSGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEVRTVTDR 362
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ ++L +P V I+ K L A KA LAAKRAR++ R+K L SSLPGKLADCS
Sbjct: 363 LFSEHFAKFLMENPTVGRQIVEKGLLASKARLAAKRAREVTRRKGALEISSLPGKLADCS 422
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S ++ E+FIVEGDSAGGSAKQGRDR FQ I+ P++ I A
Sbjct: 423 SREADKCELFIVEGDSAGGSAKQGRDREFQAIL-PIRGKILNVEKA 467
>gi|419631437|ref|ZP_14164023.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni LMG 23264]
gi|380610678|gb|EIB30259.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni LMG 23264]
Length = 769
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/466 (46%), Positives = 310/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I+V
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD Q+
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGV----IGKSKKTGTTIEFWPDDQI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LNPK+TI + D ++ + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYEILAKRFRELAYLNPKITINFK----DNRVGKHESFHFEGGISQFVIDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKAIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++GE VREGL ++SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDNKITGEDVREGLIAVVSVKVPEPQFEGQTKGKLGSTYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYLT+Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|419653406|ref|ZP_14184380.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 2008-872]
gi|380632592|gb|EIB50658.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 2008-872]
Length = 769
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/466 (46%), Positives = 310/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I+V
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTERSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD Q+
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGV----IGKSKKTGTTIEFWPDDQI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LNPK+TI + D ++ + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYEILAKRFRELAYLNPKITINFK----DNRVGKHESFHFEGGISQFVTDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKAIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++G+ VREGL I+SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDNKITGDDVREGLIAIVSVKVPEPQFEGQTKGKLGSTYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYLT+Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|258647794|ref|ZP_05735263.1| DNA gyrase, B subunit [Prevotella tannerae ATCC 51259]
gi|260852245|gb|EEX72114.1| DNA gyrase, B subunit [Prevotella tannerae ATCC 51259]
Length = 653
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/469 (49%), Positives = 312/469 (66%), Gaps = 13/469 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S Y + IQVLEGLEAVRKRPAMYIG +GLHHLVYE +DN++DEA AGY ++IEV
Sbjct: 8 SSNYSASNIQVLEGLEAVRKRPAMYIGDISDKGLHHLVYETVDNSIDEALAGYCTHIEVT 67
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS+ V DNGRGIP+D+HP ++SALE V+TVLHAGGKF S Y VSGGLHGVG+
Sbjct: 68 ICTDNSIIVQDNGRGIPVDMHPKEHRSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGV 125
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
S VNALS+ + V+RDG Y Q+Y +GKP+ + V +GT+ +FWPD VF
Sbjct: 126 SCVNALSKHMTSQVFRDGKIYQQEYEQGKPLYPVKV----VGETQLRGTKQQFWPDDTVF 181
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNT 312
T I ++++T+A R+RELAFLN L I L D E N E F++ GL E+V+++++
Sbjct: 182 TATI-YNYDTLATRMRELAFLNAGLKITLTDLRPDEEGNTKQEEFYSEQGLREFVRYVDS 240
Query: 313 DKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+ L +DV+ + I I++A+ + + +YS+ + Y N+I TI+GGTH+ G + ++T
Sbjct: 241 SRTHLFNDVIYISTNKADIPIEVAIMYNT-SYSENVHSYVNNINTIEGGTHLIGFRQAIT 299
Query: 372 RTLNSLGKKS--KTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
R L +++ K ++ I +SGE REGLT +ISV+V P+FEGQTKTRLGN EV
Sbjct: 300 RVLKKYAEQTAAKQIEKAKIEISGEDFREGLTAVISVKVAEPQFEGQTKTRLGNTEVTGA 359
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
V+Q+V E LT YLE HP I+ K + A A +AA++AR+ V++K+ + LPGKLA
Sbjct: 360 VNQAVGEALTNYLEEHPKEAKLIVDKVILAATARIAARKARESVQRKNPMSGGGLPGKLA 419
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
DCSS E+F+VEGDSAGGSAKQ R R Q I+ PL+ I A
Sbjct: 420 DCSSKDAAVCELFLVEGDSAGGSAKQARSRTTQAIL-PLRGKILNVEKA 467
>gi|422865768|ref|ZP_16912393.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK1058]
gi|327489313|gb|EGF21106.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK1058]
Length = 649
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/475 (48%), Positives = 327/475 (68%), Gaps = 11/475 (2%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
TE +++ ++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA A
Sbjct: 2 TEEKQQDIQAQEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALA 61
Query: 125 GYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 184
G+AS+I+V + DNS++V DNGRGIP+D+ T + A+ETV TVLHAGGKFGG S
Sbjct: 62 GFASHIQVFIEKDNSITVVDNGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSG 121
Query: 185 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 244
LHGVG SVVNALS L+V V+++G ++Q+Y RG V L + DR GT +
Sbjct: 122 G--LHGVGSSVVNALSTQLDVRVYKNGQIHYQEYRRGHVVADLEI----IGETDRTGTTV 175
Query: 245 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 304
F PD ++FT ++FD + R++ELAFLN L I++ + E Q +Y + GG+
Sbjct: 176 HFTPDPEIFTETVEFDFEKLNKRVQELAFLNRGLRISITDKRDGME--QVKDYHYEGGIA 233
Query: 305 EYVQWLNTDKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
YVQ++N +K + + + ++D IT+++A+Q+ + Y +T++ +AN+I T +GGTH
Sbjct: 234 SYVQYINENKDVIFETPIYTDGEMDDITVEVAMQYTT-GYHETVMSFANNIHTHEGGTHE 292
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
+G + +LTR +N KK+K +K+ + +L+GE VREGLT +ISV+ PNP+FEGQTKT+LGN
Sbjct: 293 QGFRTALTRVINDYAKKNKLLKENEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGN 352
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
EV K+ ++ E +++L +P V I+ K + A KA +AAKRAR++ R+KS L S+
Sbjct: 353 SEVVKITNRLFSEAFSDFLLENPAVARKIVEKGILASKARIAAKRAREVTRKKSGLEISN 412
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKLADCSS P+E+E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 413 LPGKLADCSSNDPQETELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 466
>gi|323343849|ref|ZP_08084076.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella oralis
ATCC 33269]
gi|323095668|gb|EFZ38242.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella oralis
ATCC 33269]
Length = 672
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 233/486 (47%), Positives = 318/486 (65%), Gaps = 19/486 (3%)
Query: 54 LPRAFLSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYE 113
L + ++ +A EN Y + IQVLEGLEAVRKRPAMYIG +GLHHLV E
Sbjct: 7 LCKKYIVKKMADIQNNEN----NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLVNE 62
Query: 114 ILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGG 173
+DN++DEA AGY ++IEV + D S++V DNGRGIP+D H +KSALE V+TVLHAGG
Sbjct: 63 TVDNSIDEAMAGYCTDIEVTINEDESITVQDNGRGIPVDEHKKLHKSALEVVMTVLHAGG 122
Query: 174 KFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLP 233
KF S Y VSGGLHGVG+S VNALS + V+RDG Y Q+Y +GKP+ +
Sbjct: 123 KFDKGS--YKVSGGLHGVGVSCVNALSSHMLSQVFRDGKIYQQEYEKGKPLYPVKV---- 176
Query: 234 VDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQ 293
+ + D++GTR +FWPDK +FTT I + + IA R+RELA+LN + I L ++ E
Sbjct: 177 MGTTDKRGTRQQFWPDKTIFTT-IHYQWDIIARRMRELAYLNAGIKITLTDLRANEEGKP 235
Query: 294 YNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYA 351
E F A GL+E+V++++ + L D V+ + + GI I++A+ + +D YS+ + Y
Sbjct: 236 RVEVFHAKDGLKEFVRYVDRHRTHLFDDVIYLKTEKQGIPIEVAIMYNTD-YSENIHSYV 294
Query: 352 NSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVR 407
N+I TI+GGTH+ G + +LTR L + SK ++ I ++GE REGLT +IS++
Sbjct: 295 NNINTIEGGTHLSGFRTALTRVLKAYADNDPVISKQIEKAKIEIAGEDFREGLTAVISIK 354
Query: 408 VPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAK 467
V P+FEGQTKT+LGN EV V Q+V E LT YLE HP I K + A A +AA+
Sbjct: 355 VAEPQFEGQTKTKLGNSEVSGAVQQAVGEALTNYLEEHPAEAKKICEKVVLAATARIAAR 414
Query: 468 RARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINP 527
+AR+ V++K+ + LPGKLADCS+ P++ EIF+VEGDSAGGSAKQGRDR Q I+ P
Sbjct: 415 KARESVQRKNFMSGGGLPGKLADCSNKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAIL-P 473
Query: 528 LQESIF 533
L+ I
Sbjct: 474 LRGKIL 479
>gi|373501103|ref|ZP_09591470.1| DNA gyrase, B subunit [Prevotella micans F0438]
gi|371950694|gb|EHO68548.1| DNA gyrase, B subunit [Prevotella micans F0438]
Length = 657
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/473 (48%), Positives = 314/473 (66%), Gaps = 18/473 (3%)
Query: 68 FKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYA 127
F+EN Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY
Sbjct: 4 FQEN--ENNYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYC 61
Query: 128 SNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGG 187
NIEV L D SV+V D+GRGIP+D H +KSALE V+TVLHAGGKF S Y VSGG
Sbjct: 62 KNIEVTLNEDGSVTVEDDGRGIPVDEHKKLHKSALEVVMTVLHAGGKFDKGS--YKVSGG 119
Query: 188 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 247
LHGVG+S VNALS ++ V+RDG Y Q+Y +GKP+ + + + ++ GTR +FW
Sbjct: 120 LHGVGVSCVNALSAHMKSQVFRDGNIYQQEYEKGKPLYPVKI----IGTTEKTGTRQQFW 175
Query: 248 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPE--KNQYNEYFFAGGLEE 305
PD +FTT F + +A R+RELA+LN + I L PE K + + GL+E
Sbjct: 176 PDNSIFTTTT-FQWDIVARRMRELAYLNAGIKIILTDMHPHPETGKTRTETFHAEDGLKE 234
Query: 306 YVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 364
+V++++ ++ L +DV+ + + GI I++A+ + +D Y++ + Y N+I TI+GGTH+
Sbjct: 235 FVRYVDRHRQHLFNDVIYLKTEKQGIPIEIAIMYNTD-YTENIHSYVNNINTIEGGTHLT 293
Query: 365 GVKASLTRTLNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTR 420
G + +LTRTL + SK ++ I ++GE REGLT +IS++V P+FEGQTKT+
Sbjct: 294 GFRTALTRTLKAYADGEPTISKQIEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTK 353
Query: 421 LGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLR 480
LGN EV V Q+V E L+ YLE HP+ I +K + A A +AA+ AR+ V++K+V+
Sbjct: 354 LGNSEVSGAVQQAVGEALSNYLEEHPNEAKLICNKVILAATARIAARNARESVQRKNVMS 413
Query: 481 SSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LPGKLADCS P++ EIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 414 GGGLPGKLADCSKKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAIL-PLRGKIL 465
>gi|169235747|ref|YP_001688947.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Halobacterium
salinarum R1]
gi|167726813|emb|CAP13599.1| DNA gyrase subunit B [Halobacterium salinarum R1]
Length = 637
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/459 (51%), Positives = 315/459 (68%), Gaps = 13/459 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + QIQVLEGLEAV+KRPAMYIGST RGLHHLVYE++DN++DEA AGY I+V L
Sbjct: 7 YSAGQIQVLEGLEAVQKRPAMYIGSTDARGLHHLVYEVVDNSIDEALAGYCDRIDVTLHD 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSV D+GRGIP+ H ++ A+E +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVTDDGRGIPVATHEEYDRPAVEVILTVLHAGGKFDAKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE L V V RDG Y +++ RG+PVT L V D GT IRF PD ++F T
Sbjct: 125 NALSERLAVEVSRDGARYREQFERGEPVTDLQH----VGDSDDSGTLIRFRPDSEIFETT 180
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+D +T+ R+RELAFLN + I L E D EY GG+ E+V++LN +
Sbjct: 181 A-YDFSTLENRLRELAFLNSGVEITLTDERGDEPTQSTFEY--EGGIREFVEYLNETRNA 237
Query: 317 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LHD V+ F+ + DGI++++A+Q D S T +AN+I T +GGTH+ G K +LTRT+N
Sbjct: 238 LHDDVIYFQGEDDGISVEIAMQASEDVQSSTH-AFANNINTREGGTHLTGFKTALTRTVN 296
Query: 376 SLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
+ + + D +L+G+ +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+++V
Sbjct: 297 DYANDNNLLSELDGENLTGDDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVERAV 356
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
+ L Y E +P +++ ++ A KA AAK+A +L R+KS L S+SLPGKLADC S
Sbjct: 357 NDGLGTYFEENPATAKAVVRTAVEAAKARKAAKKAEELTRRKSALGSTSLPGKLADCQSK 416
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
PE++E+F+VEGDSAGGSAKQGR+ FQ I+ PL I
Sbjct: 417 APEDAELFVVEGDSAGGSAKQGRNPGFQAIL-PLGGKIL 454
>gi|256389238|ref|YP_003110802.1| DNA gyrase subunit B [Catenulispora acidiphila DSM 44928]
gi|256355464|gb|ACU68961.1| DNA gyrase, B subunit [Catenulispora acidiphila DSM 44928]
Length = 661
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 237/472 (50%), Positives = 316/472 (66%), Gaps = 21/472 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ I VLEGLEAVRKRP MYIGSTG RGLHHLVYEI+DN+VDEA AGYA IEV LLA
Sbjct: 18 YNADSISVLEGLEAVRKRPGMYIGSTGERGLHHLVYEIVDNSVDEAMAGYADTIEVWLLA 77
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D V V DNGRGIP+ ++ T KSALE V+T+LHAGGKFG GY VSGGLHGVG+SVV
Sbjct: 78 DGGVKVVDNGRGIPVGINTKTGKSALEVVMTILHAGGKFG--DGGYKVSGGLHGVGVSVV 135
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS +EV V DG ++Q Y G P T + D+ GT FW D +F T
Sbjct: 136 NALSSRVEVEVHTDGFVWNQVYKHGVPETEVQKGGPAADT----GTSTIFWADVDIFETT 191
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYN------EYFFAGGLEEYVQWL 310
+ + T++ R +E+AFLN LTI+L D PE N +Y GG+ ++V+ +
Sbjct: 192 V-YSFETLSRRFQEMAFLNKGLTISL--TDERPEFRDENGEQRSVKYHAEGGIADFVRHI 248
Query: 311 NTDK-KPLH-DVVGFR-KDVD-GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 366
N+ K +P+H +V+ F +D D + ++ALQW S YS+++ +AN+I T GGTH EG
Sbjct: 249 NSRKGEPVHPNVIDFEGEDKDRTLAAEIALQWNS-QYSESIYTFANNINTHGGGTHEEGF 307
Query: 367 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 426
+A+LT +N + K +K+KD +L+GE +REGLT I+SV++ P+FEGQTK +LGNPE
Sbjct: 308 RAALTTLINKYARDQKLLKEKDDNLAGEDIREGLTTIVSVKLAEPQFEGQTKDKLGNPEA 367
Query: 427 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 486
+ V + V E L E+LE +P+ ++ K++ A A +AA++AR+L R+K +L SSSLPG
Sbjct: 368 KTFVQRLVYEKLGEWLEENPNEAREVIRKTIQASTARMAARKARELTRRKGLLESSSLPG 427
Query: 487 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
KL+DC S P ++EIFIVEGDSAGGSA+ GRD Q I+ P++ I A
Sbjct: 428 KLSDCQSNDPTKTEIFIVEGDSAGGSARSGRDPMTQAIL-PIRGKILNVEKA 478
>gi|157151219|ref|YP_001450712.1| DNA gyrase subunit B [Streptococcus gordonii str. Challis substr.
CH1]
gi|157076013|gb|ABV10696.1| DNA gyrase, B subunit [Streptococcus gordonii str. Challis substr.
CH1]
Length = 649
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/475 (48%), Positives = 329/475 (69%), Gaps = 11/475 (2%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
TE +++ S+ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA A
Sbjct: 2 TEEKQQDIQSQEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALA 61
Query: 125 GYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 184
G+AS+I+V + DNS++V D+GRGIP+D+ T + A+ETV TVLHAGGKFGG S
Sbjct: 62 GFASHIQVFIEKDNSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSG 121
Query: 185 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 244
LHGVG SVVNALS L+V V+++G + Q+Y+RG+ V L + DR GT +
Sbjct: 122 G--LHGVGSSVVNALSTQLDVKVYKNGQIHFQEYTRGQVVADLKV----IGETDRTGTTV 175
Query: 245 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 304
F PD ++FT ++FD + RI+ELAFLN L+I++ + E Q +Y + GG+
Sbjct: 176 HFTPDPEIFTETVEFDFEKLNKRIQELAFLNRGLSISITDKRDGME--QSKDYHYEGGIA 233
Query: 305 EYVQWLNTDKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
YVQ++N +K+ + D + +++ IT+++A+Q+ + Y +T++ +AN+I T +GGTH
Sbjct: 234 SYVQYINENKEVIFDNPIYTDGEMEDITVEVAMQYTT-GYHETVMSFANNIHTHEGGTHE 292
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
+G + +LTR +N KK+K +K+ + +L+GE VREGLT +ISV+ PNP+FEGQTKT+LGN
Sbjct: 293 QGFRTALTRVINDYAKKNKLLKENEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGN 352
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
EV K+ ++ E +++L +P V I+ K + A KA +AAKRAR++ R+KS L S+
Sbjct: 353 SEVVKITNRLFSEAFSDFLLENPAVAKKIVEKGILASKARIAAKRAREVTRKKSGLEISN 412
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKLADCSS P E+E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 413 LPGKLADCSSNNPVETELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 466
>gi|86153959|ref|ZP_01072161.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni HB93-13]
gi|419669065|ref|ZP_14198864.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 1997-11]
gi|85842497|gb|EAQ59710.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni HB93-13]
gi|380648087|gb|EIB64962.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 1997-11]
Length = 769
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/466 (46%), Positives = 310/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I+V
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD Q+
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGV----IGKSKKTGTTIEFWPDDQI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LNPK+TI + D ++ + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYEILAKRFRELAYLNPKITINFK----DNRVGKHESFHFEGGISQFVIDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKAIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++GE VREGL ++SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDNKITGEDVREGLIAVVSVKVPEPQFEGQTKGKLGSTYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYLT+Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|422846387|ref|ZP_16893070.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK72]
gi|325687830|gb|EGD29850.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK72]
Length = 649
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/475 (48%), Positives = 327/475 (68%), Gaps = 11/475 (2%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
TE +++ ++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA A
Sbjct: 2 TEEKQQDIQAQEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALA 61
Query: 125 GYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 184
G+AS+I+V + DNS++V DNGRGIP+D+ T + A+ETV TVLHAGGKFGG S
Sbjct: 62 GFASHIQVFIEKDNSITVVDNGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSG 121
Query: 185 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 244
LHGVG SVVNALS L+V V+++G ++Q+Y RG V L + DR GT +
Sbjct: 122 G--LHGVGSSVVNALSTQLDVRVYKNGQIHYQEYRRGHVVADLEI----IGETDRTGTTV 175
Query: 245 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 304
F PD ++FT ++FD + R++ELAFLN L I++ + E Q +Y + GG+
Sbjct: 176 HFTPDPEIFTETVEFDFEKLNKRVQELAFLNRGLRISITDKRDGME--QSKDYHYEGGIA 233
Query: 305 EYVQWLNTDKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
YVQ++N +K + + + ++D IT+++A+Q+ + Y +T++ +AN+I T +GGTH
Sbjct: 234 SYVQYINENKDVIFETPIYTDGEMDDITVEVAMQYTT-GYHETVMSFANNIHTHEGGTHE 292
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
+G + +LTR +N KK+K +K+ + +L+GE VREGLT +ISV+ PNP+FEGQTKT+LGN
Sbjct: 293 QGFRTALTRVINDYAKKNKLLKENEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGN 352
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
EV K+ ++ E +++L +P V I+ K + A KA +AAKRAR++ R+KS L S+
Sbjct: 353 SEVVKITNRLFSEAFSDFLLENPAVARKIVEKGILASKARIAAKRAREVTRKKSGLEISN 412
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKLADCSS P+E+E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 413 LPGKLADCSSNDPQETELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 466
>gi|404491536|ref|YP_006715642.1| DNA gyrase subunit B [Pelobacter carbinolicus DSM 2380]
gi|77543705|gb|ABA87267.1| DNA gyrase, B subunit [Pelobacter carbinolicus DSM 2380]
Length = 795
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 232/466 (49%), Positives = 314/466 (67%), Gaps = 14/466 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ I+VLEGL AVRKRPAMYIGSTG GLHHLVYE++DN++DE+ AG I V
Sbjct: 6 QREYGAGSIKVLEGLSAVRKRPAMYIGSTGVMGLHHLVYEVVDNSIDESLAGVCDEISVI 65
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
L D SV+V DNGRGIP+D+HP NKSA E V+TVLHAGGKF S Y VSGGLHGVG+
Sbjct: 66 LHLDGSVTVEDNGRGIPVDMHPTQNKSAAEVVMTVLHAGGKF--DSDSYKVSGGLHGVGV 123
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LE+ + R+G Y Q Y RG P L ++GTRI FWPD ++F
Sbjct: 124 SVVNALSKKLELEIRRNGRIYRQGYVRGVPDAPLREE----GDTTKRGTRITFWPDPEIF 179
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
F T++ R+RELAFLN + I + E S+ + +++ + GG+ +V +LN
Sbjct: 180 EIT-DFSFETLSKRLRELAFLNGGVHIHIVDERSE----KRHDFHYEGGIISFVSYLNRA 234
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K PLH + + F + +G+ I++A Q+ +D Y + + +AN+I T +GGTH+ G KA+LTR
Sbjct: 235 KTPLHAEPIFFSGEREGVQIEVAFQY-NDGYDEKIFTFANNINTHEGGTHLVGFKAALTR 293
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
T+NS + +K+ S+SG+ +REG+ +ISV+VP+P+FEGQTKT+LGN E++ V+
Sbjct: 294 TMNSYATANNLLKNVKASISGDDLREGMAAVISVKVPDPQFEGQTKTKLGNSEIKGYVET 353
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ E L ++E +P+V IL K + A +A AA++ARDL R+K VL S +LPGKLADC
Sbjct: 354 LINEKLATFMEENPNVAKRILEKGIEAARAREAARKARDLTRRKGVLDSLALPGKLADCQ 413
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P EI++VEGDSAGGSAKQGRDRR Q I+ PL+ I A
Sbjct: 414 EKDPALCEIYLVEGDSAGGSAKQGRDRRNQAIL-PLKGKILNVEKA 458
>gi|393782285|ref|ZP_10370470.1| DNA gyrase, B subunit [Bacteroides salyersiae CL02T12C01]
gi|392673556|gb|EIY67015.1| DNA gyrase, B subunit [Bacteroides salyersiae CL02T12C01]
Length = 655
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/466 (48%), Positives = 310/466 (66%), Gaps = 12/466 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y ++ IQVLEGLEAVRKRPAMYIG +GLHHLVYEI+DN++DEA AGY +IEV +
Sbjct: 15 SYSADSIQVLEGLEAVRKRPAMYIGDISVKGLHHLVYEIVDNSIDEALAGYCDHIEVTIN 74
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+D H KSALE +TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 75 EDNSITVQDNGRGIPVDFHEKEQKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGVGMSC 132
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS + V+R+G Y Q+Y GKP+ V V + GTR +FWPD +FT
Sbjct: 133 VNALSTHMVTQVYRNGKVYQQEYEIGKPLYP----VKEVGVSEHTGTRQQFWPDNTIFTE 188
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTD 313
+ + + +AGR+RELA+LN + I L + ++ Q+ + F GL+E+V++L +
Sbjct: 189 TV-YKYEILAGRMRELAYLNAGIKITLTDRRTVNDEGQFKQEVFYSEEGLKEFVRYLESS 247
Query: 314 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
+ L +DV+ + GI I++A+ + + +S+++ Y N+I TI+GGTH+ G + +LTR
Sbjct: 248 RDHLINDVIYLNTEKQGIPIEVAIMYNT-GFSESIHSYVNNINTIEGGTHLAGFRRALTR 306
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
TL + SK ++ + ++G+ REGLT +ISV+V P+FEGQTKT+LGN EV VDQ
Sbjct: 307 TLKKYAEDSKMLEKVKVEIAGDDFREGLTGVISVKVAEPQFEGQTKTKLGNNEVMGAVDQ 366
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+V E L+ YLE HP I+ K + A A AA++AR++V++KS + LPGKLADCS
Sbjct: 367 AVGEALSYYLEEHPKEAKQIVDKVILAATARHAARKAREMVQRKSPMSGGGLPGKLADCS 426
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
+ E+F+VEGDSAGG+AKQGR+R FQ I+ PL+ I A
Sbjct: 427 DKDATKCELFLVEGDSAGGTAKQGRNRAFQAIL-PLRGKILNVEKA 471
>gi|257051220|ref|YP_003129053.1| DNA gyrase, B subunit [Halorhabdus utahensis DSM 12940]
gi|256689983|gb|ACV10320.1| DNA gyrase, B subunit [Halorhabdus utahensis DSM 12940]
Length = 637
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/458 (50%), Positives = 317/458 (69%), Gaps = 11/458 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGL+AV+KRPAMYIGST RGLHHLVYE++DNA+DEA AG+ +IEV +
Sbjct: 7 YGAGQIQVLEGLQAVQKRPAMYIGSTDTRGLHHLVYEVVDNAIDEALAGHCDHIEVTIHD 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSV D+GRGIPID+H ++ A+E ++TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVTDDGRGIPIDIHEEYDRPAVEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS+ LEV V R+G + Q + G P LT + +D D GT IRFWPD+++F T
Sbjct: 125 NALSQKLEVEVSREGNVWKQTFDHGAPADDLT-EIRSLDDPDETGTTIRFWPDEEIFETT 183
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
F +T+A R+RELAFLN + I L +D + + + + GG+ E+V++LN K P
Sbjct: 184 -DFQFSTLANRLRELAFLNSGVEITL----ADDREERAETFQYEGGIREFVEYLNETKDP 238
Query: 317 LHDVVGFRKDVD-GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LHD V + +D D I +++ALQ ++ ++ +AN+I T +GG+H+ G K +LTR +N
Sbjct: 239 LHDEVVYFEDEDQDIQVEVALQATTELQG-SIHAFANNINTREGGSHLTGFKTALTRVVN 297
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+ + D + +L GE +REGLT +IS++ P+P+FEGQTKT+LGN EVR VV+ ++
Sbjct: 298 DYATTNDLLSDIEETLKGEDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGVVESAMH 357
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L Y E +P V +I+ K++ A KA AA++A +L R+KS L S++LPGKLADC +
Sbjct: 358 ENLGTYFEENPAVAQAIVRKAVEAAKARKAAQKAEELTRRKSALESTALPGKLADCQTKD 417
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P +E+FI EGDSAGGSAKQ R+ FQ ++ P++ I
Sbjct: 418 PSRAELFIAEGDSAGGSAKQARNPDFQAVL-PIRGKIL 454
>gi|160914817|ref|ZP_02077031.1| hypothetical protein EUBDOL_00824 [Eubacterium dolichum DSM 3991]
gi|158433357|gb|EDP11646.1| DNA gyrase, B subunit [Eubacterium dolichum DSM 3991]
Length = 648
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/475 (48%), Positives = 321/475 (67%), Gaps = 13/475 (2%)
Query: 66 EAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAG 125
E + V +Y ++ IQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AG
Sbjct: 10 EEMENGKVDHSYTADDIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAG 69
Query: 126 YASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVS 185
+A++IE+A+ DN + V DNGRG+P+ + T S +ET+ TVLHAGGKFGG + Y VS
Sbjct: 70 FATDIEIAIEKDNVIRVEDNGRGMPVGIVEKTGISGVETIFTVLHAGGKFGGGA--YKVS 127
Query: 186 GGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG-KPVTTLTCHVLPVDSKDRQGTRI 244
GGLHGVG SVVNALSE LEVTV ++G ++ ++ G KP L + D+ G+ +
Sbjct: 128 GGLHGVGASVVNALSEWLEVTVHQNGKKHFLRFENGGKPSGALKV----IGDTDKHGSVV 183
Query: 245 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 304
RF D +FT + +T+ RIR+LAFLN + + + D E+ + EY + GG+
Sbjct: 184 RFKADASIFTETQVYSFDTLNTRIRQLAFLNKGIRLVII--DEREEEAKRIEYKYDGGIR 241
Query: 305 EYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
+YV++LN +K LH DV+ +GI ++ALQ+ +D Y + + N+I T++GGTH
Sbjct: 242 QYVEYLNKNKNVLHEDVIYVEGLEEGILAEVALQY-NDGYMPNIYSFCNNINTMEGGTHE 300
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
+G + +LTR +N+ +++ +K KD +L+G+ VREGLT IISV+ P+P++EGQTKT+LGN
Sbjct: 301 DGFRLALTRVINAYARENNLIK-KDETLAGDDVREGLTAIISVKHPDPQYEGQTKTKLGN 359
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
EVRK+V + + L +L +P I+ K + A KA +AAK+AR+L R+KS L +S
Sbjct: 360 SEVRKIVSGILGDQLERFLIENPTTAKIIVEKGVLASKARMAAKKARELTRRKSALEITS 419
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKLADCSS E EI+IVEGDSAGGSAKQGR+ +FQ I+ PL+ I A
Sbjct: 420 LPGKLADCSSKDASECEIYIVEGDSAGGSAKQGRNSKFQAIL-PLRGKILNVEKA 473
>gi|419671525|ref|ZP_14201183.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 1997-14]
gi|419679510|ref|ZP_14208509.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 87459]
gi|380649281|gb|EIB66019.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 1997-14]
gi|380657169|gb|EIB73259.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 87459]
Length = 769
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/466 (46%), Positives = 310/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I+V
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD Q+
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGV----IGKSKKTGTTIEFWPDDQI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LNPK+TI + D ++ + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYEILAKRFRELAYLNPKITINFK----DNRVGKHESFHFEGGISQFVTDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKAIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++G+ VREGL ++SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDNKITGDDVREGLIAVVSVKVPEPQFEGQTKGKLGSTYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYLT+Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|422876732|ref|ZP_16923202.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK1056]
gi|332361540|gb|EGJ39344.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK1056]
Length = 649
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/475 (48%), Positives = 327/475 (68%), Gaps = 11/475 (2%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
TE +++ ++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA A
Sbjct: 2 TEEKQKDIQAQKYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALA 61
Query: 125 GYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 184
G+AS+I+V + DNS++V DNGRGIP+D+ T + A+ETV TVLHAGGKFGG S
Sbjct: 62 GFASHIQVFIEKDNSITVVDNGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSG 121
Query: 185 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 244
LHGVG SVVNALS L+V V+++G ++Q+Y RG V L + DR GT +
Sbjct: 122 G--LHGVGSSVVNALSTQLDVRVYKNGQIHYQEYRRGHVVADLEI----IGETDRTGTTV 175
Query: 245 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 304
F PD ++FT ++FD + R++ELAFLN L I++ + E Q +Y + GG+
Sbjct: 176 HFTPDPEIFTETVEFDFEKLNKRVQELAFLNRGLRISITDKRDGME--QVKDYHYEGGIA 233
Query: 305 EYVQWLNTDKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
YVQ++N +K + + + ++D IT+++A+Q+ + Y +T++ +AN+I T +GGTH
Sbjct: 234 SYVQYINENKDVIFETPIYTDGEMDDITVEVAMQYTT-GYHETVMSFANNIHTHEGGTHE 292
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
+G + +LTR +N KK+K +K+ + +L+GE VREGLT +ISV+ PNP+FEGQTKT+LGN
Sbjct: 293 QGFRTALTRVINDYAKKNKLLKENEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGN 352
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
EV K+ ++ E +++L +P V I+ K + A KA +AAKRAR++ R+KS L S+
Sbjct: 353 SEVVKITNRLFSEAFSDFLLENPAVARKIVEKGILASKARIAAKRAREVTRKKSGLEISN 412
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKLADCSS P+E+E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 413 LPGKLADCSSNDPQETELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 466
>gi|5817861|gb|AAD52967.1|AF167102_1 DNA gyrase beta subunit [Acholeplasma laidlawii]
Length = 615
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/463 (49%), Positives = 302/463 (65%), Gaps = 13/463 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ IQ+LEGLEAV+KRP MYIGSTG RGLHHLV+EI+DN++DEA GYA I + +L
Sbjct: 9 YTADNIQILEGLEAVKKRPGMYIGSTGERGLHHLVWEIVDNSIDEALCGYADEITIEILK 68
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
+ V DNGRGIP+D+HP T + A+ET+LT LHAGGKF S Y VSGGLHGVG SVV
Sbjct: 69 GEVIRVTDNGRGIPVDIHPKTKRPAVETILTTLHAGGKFDKGS--YKVSGGLHGVGASVV 126
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
N LSE V + +DG Y QKY RG P L S D+ GT I F D +FT
Sbjct: 127 NGLSEWFVVEIHKDGTIYEQKYERGIPAYDLKVK----GSTDKSGTIISFQADPLIFTET 182
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+ +++ T+ RI++LAFLN L + L D E+N+ + + GG+ EYV++LN K
Sbjct: 183 VIYNYETLRTRIQQLAFLNKGLKLNLI--DDRFEENKSESFHYEGGITEYVKFLNQSKSK 240
Query: 317 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
+H D++ K+ DGIT++LA+Q+ D+YS + + N+I T +GG H +G K +L+ ++
Sbjct: 241 IHNDIIYIDKEQDGITVELAMQFV-DSYSPNLHSFTNNISTTEGGMHEDGFKMALSAVIS 299
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
K KD S+SGE REGLT IISV+ P P+FEGQTKT+LGNPEVR + Q
Sbjct: 300 KYADDLKMKKDD--SISGEDTREGLTAIISVKHPEPQFEGQTKTKLGNPEVRAITSQITS 357
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E + +L +P +I+ K L A +A +AA++A+DL R+KS L + KLADC S
Sbjct: 358 EAIERFLMENPAQAKAIVEKVLLATRARVAARKAKDLTRRKSPLDALGFASKLADCRSKD 417
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PE+SEI+IVEGDSAGGSAKQGRD FQ I+ PL+ + A
Sbjct: 418 PEKSEIYIVEGDSAGGSAKQGRDSEFQAIM-PLRGKVLNVEKA 459
>gi|422860418|ref|ZP_16907062.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK330]
gi|327469614|gb|EGF15083.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK330]
Length = 649
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/475 (48%), Positives = 327/475 (68%), Gaps = 11/475 (2%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
TE +++ ++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA A
Sbjct: 2 TEEKQQDIQAQEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALA 61
Query: 125 GYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 184
G+AS+I+V + DNS++V DNGRGIP+D+ T + A+ETV TVLHAGGKFGG S
Sbjct: 62 GFASHIQVFIEKDNSITVVDNGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSG 121
Query: 185 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 244
LHGVG SVVNALS L+V V+++G ++Q+Y RG V L + DR GT +
Sbjct: 122 G--LHGVGSSVVNALSTQLDVRVYKNGQIHYQEYRRGHVVADLEI----IGETDRTGTTV 175
Query: 245 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 304
F PD ++FT ++FD + R++ELAFLN L I++ + E Q +Y + GG+
Sbjct: 176 HFTPDPEIFTETVEFDFEKLNKRVQELAFLNRGLRISITDKRDGME--QVKDYHYEGGIV 233
Query: 305 EYVQWLNTDKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
YVQ++N +K + + + ++D IT+++A+Q+ + Y +T++ +AN+I T +GGTH
Sbjct: 234 SYVQYINENKDVIFETPIYTDGEMDDITVEVAMQYTT-GYHETVMSFANNIHTHEGGTHE 292
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
+G + +LTR +N KK+K +K+ + +L+GE VREGLT +ISV+ PNP+FEGQTKT+LGN
Sbjct: 293 QGFRTALTRVINDYAKKNKLLKENEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGN 352
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
EV K+ ++ E +++L +P V I+ K + A KA +AAKRAR++ R+KS L S+
Sbjct: 353 SEVVKITNRLFSEAFSDFLLENPAVARKIVEKGILASKARIAAKRAREVTRKKSGLEISN 412
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKLADCSS P+E+E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 413 LPGKLADCSSNDPQETELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 466
>gi|282880626|ref|ZP_06289332.1| DNA gyrase, B subunit [Prevotella timonensis CRIS 5C-B1]
gi|281305521|gb|EFA97575.1| DNA gyrase, B subunit [Prevotella timonensis CRIS 5C-B1]
Length = 657
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 232/473 (49%), Positives = 311/473 (65%), Gaps = 16/473 (3%)
Query: 67 AFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGY 126
A K+N Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY
Sbjct: 2 AEKQN-TENNYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGY 60
Query: 127 ASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSG 186
++IEV + D S++V DNGRGIP+D H +KSALE V+TVLHAGGKF S Y VSG
Sbjct: 61 CTDIEVTINEDESITVQDNGRGIPVDQHEKLHKSALEVVMTVLHAGGKFDKGS--YKVSG 118
Query: 187 GLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRF 246
GLHGVG+S VNALS + V+RDG Y Q+Y +GK + + V D++GTR +F
Sbjct: 119 GLHGVGVSCVNALSSHMTSQVFRDGKIYQQEYEKGKALYPVKV----VGETDKRGTRQQF 174
Query: 247 WPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEE 305
WPD +FTT F + IA R+RELAFLN + I L + E E F A GL+E
Sbjct: 175 WPDGSIFTTT-HFQWDIIARRMRELAFLNAGIRITLTDLRPNEEGKTRTEVFHAKDGLKE 233
Query: 306 YVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 364
+V++++ + L DV+ + + GI I++A+ + +D YS+ + Y N+I TI+GGTH+
Sbjct: 234 FVRYVDRHRTHLFDDVIYLKTEKQGIPIEVAIMYNTD-YSENIHSYVNNINTIEGGTHLT 292
Query: 365 GVKASLTRTLNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTR 420
G +A+LTRTL + SK ++ I ++GE REGLT +IS++V P+FEGQTKT+
Sbjct: 293 GFRAALTRTLKTYADSEPTISKQIEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTK 352
Query: 421 LGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLR 480
LGN EV V Q+V E L+ YLE HP I K + A A +AA++AR+ V++K+ +
Sbjct: 353 LGNSEVSGAVQQAVGEALSNYLEEHPTEAKQICEKVVLAATARIAARKARESVQRKNFMS 412
Query: 481 SSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LPGKLADCS+ P++ EIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 413 GGGLPGKLADCSNKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAIL-PLRGKIL 464
>gi|253698660|ref|YP_003019849.1| DNA gyrase B subunit [Geobacter sp. M21]
gi|251773510|gb|ACT16091.1| DNA gyrase, B subunit [Geobacter sp. M21]
Length = 796
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/463 (48%), Positives = 318/463 (68%), Gaps = 14/463 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+++IQ+LEGLEAVRKRPAMYIGST +GLHHLVYE++DNA+DEA AGY ++V +
Sbjct: 9 YGADKIQILEGLEAVRKRPAMYIGSTAAQGLHHLVYELVDNAIDEALAGYCDAVQVIIHL 68
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV+V DNGRGIP D+HP +SA E VLTVLHAGGKF SS Y VSGGLHGVG SVV
Sbjct: 69 DGSVTVEDNGRGIPTDMHPTEGRSAAEVVLTVLHAGGKFDNSS--YKVSGGLHGVGSSVV 126
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS L++ + R+G Y Q Y +G P L R+GT+I F+PD ++F T
Sbjct: 127 NALSTRLDLEIRRNGHVYTQTYRKGVPQAPLEI----TGETKRRGTKITFFPDGEIFETT 182
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+F + ++ R+RELAFLN + I + E D + +++F+ GG+ +V++LN +K
Sbjct: 183 -EFSFDVLSKRLRELAFLNAGVRIKIHDERFDKD----HDFFYEGGIRSFVEYLNKNKNL 237
Query: 317 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
++ + + R + G+ I++A+Q+ +D+Y + + +AN+I T +GGTH+ G KA+LTRT+N
Sbjct: 238 VNPEPIYIRGEKSGVDIEIAMQY-NDSYDEKVFSFANNINTHEGGTHLIGFKAALTRTMN 296
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+ + +K+ +++SGE +REGLT +ISV++ P+FEGQTKT+LGN EV+ V+ +
Sbjct: 297 TYANTNNLLKNVKVAISGEDLREGLTAVISVKISQPQFEGQTKTKLGNSEVKGYVETLMN 356
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L YLE +P + IL KS+ A +A AA++AR+L R+K L +LPGKLADC
Sbjct: 357 EKLATYLEENPAMARKILEKSIDAARAREAARKARELTRRKGALEVGTLPGKLADCQEKD 416
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P E+F+VEGDSAGGSAKQGRDR++Q I+ PL+ I A
Sbjct: 417 PALCELFLVEGDSAGGSAKQGRDRKYQAIL-PLKGKILNVEKA 458
>gi|189345573|ref|YP_001942102.1| DNA gyrase subunit B [Chlorobium limicola DSM 245]
gi|189339720|gb|ACD89123.1| DNA gyrase, B subunit [Chlorobium limicola DSM 245]
Length = 643
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/464 (49%), Positives = 306/464 (65%), Gaps = 15/464 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y + IQ+L+G+E VR RPAMYIG RGLHHLVYEI+DN++DE GY I V L
Sbjct: 11 SYLATNIQILDGIEHVRMRPAMYIGDIHTRGLHHLVYEIVDNSIDETLGGYNDYIFVGLN 70
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
D SV+V D GRGIP+D+HP KSALE V+TV+ AGGKF Y VSGGLHGVG SV
Sbjct: 71 PDGSVTVIDRGRGIPVDIHPEKQKSALELVMTVIGAGGKF--DKGAYKVSGGLHGVGASV 128
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALSE EV V+RDG Y Q+Y RG P V + D +GT+ F PD ++F T
Sbjct: 129 VNALSEWCEVEVYRDGKAYFQRYERGVP----QGDVKEIGPSDLRGTKTTFKPDHEIFKT 184
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK- 314
+F + I R+RELAFLN L I ++ D + E + + GGL E+VQ+ + ++
Sbjct: 185 T-EFRRDIIIDRMRELAFLNKTLRITVQDSDGNEEV-----FHYEGGLNEFVQFTDQNRI 238
Query: 315 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
K L + V + D ++LALQ+ +D+Y + + Y N+I T +GGTH+ G + +LTRTL
Sbjct: 239 KLLKEPVYIYGERDSTIVELALQY-NDSYQENVFSYVNNINTHEGGTHVTGFRKALTRTL 297
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N+ +K+ +K+ +SL+G+ +EGLT +ISV+V P+FEGQTKT+LGN E + +V+ V
Sbjct: 298 NAYAQKNDLLKNLKLSLTGDDFKEGLTAVISVKVAEPQFEGQTKTKLGNSETQSIVESIV 357
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E L E+LE +P+VL I+ K A + AA++A++L R+KSVL SS LPGKLADCS
Sbjct: 358 NEQLAEFLESNPNVLKLIIEKVKGAAMSREAARKAKELTRRKSVLESSGLPGKLADCSIN 417
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PE E++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 418 DPEHCELYIVEGDSAGGSAKQGRDRSFQAIL-PLKGKILNVEKA 460
>gi|167043616|gb|ABZ08310.1| putative DNA gyrase B, partial [uncultured marine microorganism
HF4000_APKG2M17]
Length = 655
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/470 (48%), Positives = 316/470 (67%), Gaps = 9/470 (1%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
EN S YG+ IQVLEGLEAVRKRPAMYIG GPRGLHHLV E++DN++DEA AG+
Sbjct: 12 ENEASNQYGASNIQVLEGLEAVRKRPAMYIGDIGPRGLHHLVNEVVDNSIDEALAGHCDA 71
Query: 130 IEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 189
I+V + D S+S+ DNGRGIP+D+HP +SALE V+T LHAGGKF + Y VSGGLH
Sbjct: 72 IDVIIHEDGSISIKDNGRGIPVDMHPIEKRSALEVVMTTLHAGGKFDKDT--YKVSGGLH 129
Query: 190 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 249
GVG+S VNALSE LE ++WRDG + Q + G PV + V + + GT +RFWPD
Sbjct: 130 GVGVSCVNALSEKLEASIWRDGALWKQTFEYGDPVGAV-AKVRDMKDGESTGTLVRFWPD 188
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 309
+F T +F + +A R+RE+A+LN + I++ ED + +EY F GG+ E+V++
Sbjct: 189 GGIFQTT-EFRFDRLADRLREMAYLNRHVYISI--EDLREAEGLRDEYHFEGGIIEFVEY 245
Query: 310 LNTDKKPLHDVVGFRKDVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
L+ + P+HD + D D + +++A+++ S Y++ +L + N+I T +GGTH+ G +
Sbjct: 246 LDEARTPIHDETIYIADEDAEVPVEMAMRYNS-GYTENVLSFVNNINTHEGGTHVSGFRR 304
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
+LTRTL S K+ +K+ + LSG+ REG+T I+S++V P+FEGQTKT+LGN EV+
Sbjct: 305 ALTRTLKSYADKNNLLKNVKVDLSGDDFREGITVILSIKVAEPQFEGQTKTKLGNSEVQG 364
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
V+ V L E+L+ HP I+ K + A +A AA++AR+LV++K+ S LPGKL
Sbjct: 365 AVESLVFLKLGEWLDDHPKESKRIVEKVIIAAEARAAARKARELVQRKNAFSSGGLPGKL 424
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
ADCSS EE EI++VEGDSAGGSAKQ RDR FQ I+ PL+ I A
Sbjct: 425 ADCSSKNAEECEIYLVEGDSAGGSAKQARDRHFQAIL-PLRGKILNVEKA 473
>gi|387132329|ref|YP_006298301.1| DNA gyrase subunit B [Prevotella intermedia 17]
gi|386375177|gb|AFJ09678.1| DNA gyrase, B subunit [Prevotella intermedia 17]
Length = 656
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/464 (49%), Positives = 310/464 (66%), Gaps = 15/464 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY S+IEV +
Sbjct: 10 NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCSHIEVTIN 69
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 70 DDNSITVEDNGRGIPVDEHEKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 127
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS + V+R+G Y Q+Y +GKP+ + V D+ GTR +FWPD +FTT
Sbjct: 128 VNALSSHMMSQVFRNGKIYQQEYEQGKPLYPVKI----VGDTDKTGTRQQFWPDASIFTT 183
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDK 314
+ F + +A R+RELAFLN + I L + E E F A GL+E+V++++ +
Sbjct: 184 TV-FQWDIVARRMRELAFLNAGIKITLTDLRPNEEGKTRQEVFHAKDGLKEFVRYVDRHR 242
Query: 315 KPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
L DV+ + + GI I++A+ + +D Y++ + Y N+I TI+GGTH+ G +A+LTRT
Sbjct: 243 THLFDDVIYLKTEKQGIPIEVAVMYNTD-YNENIHSYVNNINTIEGGTHLTGFRAALTRT 301
Query: 374 LNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
L S +K ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 302 LKSYADNEPQIAKQIEKAKIEITGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGA 361
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
V Q+V E L+ YLE +P I K + A A +AA++AR+ V++K+V+ LPGKLA
Sbjct: 362 VQQAVGEALSYYLEENPAEAKLICDKVILAATARIAARKARESVQRKNVMTGGGLPGKLA 421
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
DCS+ P+E EIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 422 DCSNKDPKECEIFLVEGDSAGGSAKQGRDRYTQAIL-PLRGKIL 464
>gi|419625148|ref|ZP_14158172.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni LMG 23223]
gi|380605492|gb|EIB25465.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni LMG 23223]
Length = 769
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/466 (46%), Positives = 310/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I+V
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDIHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD Q+
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGV----IGKSKKTGTTIEFWPDDQI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LNPK+TI + D ++ + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYEILAKRFRELAYLNPKITINFK----DNRVGKHESFHFEGGISQFVTDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKAIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++G+ VREGL ++SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDNKITGDDVREGLIAVVSVKVPEPQFEGQTKGKLGSTYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYLT+Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|289579993|ref|YP_003478459.1| DNA gyrase subunit beta [Natrialba magadii ATCC 43099]
gi|448281231|ref|ZP_21472538.1| DNA gyrase subunit B [Natrialba magadii ATCC 43099]
gi|289529546|gb|ADD03897.1| DNA gyrase, B subunit [Natrialba magadii ATCC 43099]
gi|445579161|gb|ELY33557.1| DNA gyrase subunit B [Natrialba magadii ATCC 43099]
Length = 643
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/461 (49%), Positives = 317/461 (68%), Gaps = 11/461 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ I V++
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDEITVSINE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D+S+SVAD+GRGIP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DDSISVADDGRGIPVDTHEEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TT 255
NALS LE TV RDG Y + G+P+ + V ++ + GT I+FWPD +F TT
Sbjct: 125 NALSSRLETTVKRDGGVYEHAFEIGEPIGDME-RVRDMEPDEETGTEIQFWPDDDIFETT 183
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY--NEYFFAGGLEEYVQWLNTD 313
+ F +T++ R+RELAFLN + I LR E E + Y + GG+ E+V++LN
Sbjct: 184 DMSF--STLSNRLRELAFLNSGVRITLRDERERTEDGEAVAETYEYEGGIREFVEYLNET 241
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
+ +H D++ F + + +++A+Q + ++ +AN+I T +GGTH+ G K +LTR
Sbjct: 242 RSAMHEDIIYFEDEDQNVRVEVAMQ-ATQELQGSIHAFANNINTREGGTHLTGFKTALTR 300
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N G ++ + D + +L GE +REGLT ++SV+ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 301 VVNDYGNENNLLSDIEENLKGEDIREGLTAVVSVKHPDPQFEGQTKTKLGNSEVRGIVEG 360
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
++ + L Y E HPD +I+ K++ A KA AA++A +L R+KS L S+SLPGKLADC
Sbjct: 361 AMHDCLGTYFEEHPDTAQAIVMKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQ 420
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
+ PEE+E+FI EGDSAGGSAKQ R+ FQ ++ P++ I
Sbjct: 421 TKDPEEAELFIAEGDSAGGSAKQARNPEFQAVL-PIKGKIL 460
>gi|419644162|ref|ZP_14175749.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni LMG 9081]
gi|380622496|gb|EIB41245.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni LMG 9081]
Length = 769
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/466 (46%), Positives = 309/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I+V
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTKGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD Q+
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGV----IGKSKKTGTTIEFWPDDQI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LNPK+TI + D ++ + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYEILAKRFRELAYLNPKITINFK----DNRVGKHESFHFEGGISQFVIDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKAIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++GE VREGL ++SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDNKITGEDVREGLIAVVSVKVPEPQFEGQTKGKLGSTYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYLT+Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|57236917|ref|YP_178032.1| DNA gyrase subunit B [Campylobacter jejuni RM1221]
gi|57165721|gb|AAW34500.1| DNA gyrase, B subunit [Campylobacter jejuni RM1221]
Length = 769
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/466 (46%), Positives = 309/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I+V
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD Q+
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGV----IGKSKKTGTTIEFWPDDQI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LNPK+TI + D ++ + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYEILAKRFRELAYLNPKITINFK----DNRVGKHESFHFEGGISQFVIDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKAIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++GE VREGL ++SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDNKITGEDVREGLIAVVSVKVPEPQFEGQTKGKLGSTYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYLT+Y E +P +I++K L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLTKYFEENPIEAKAIMNKVLMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|39995114|ref|NP_951065.1| DNA gyrase subunit B [Geobacter sulfurreducens PCA]
gi|409910588|ref|YP_006889053.1| DNA gyrase subunit B [Geobacter sulfurreducens KN400]
gi|39981876|gb|AAR33338.1| DNA gyrase, B subunit [Geobacter sulfurreducens PCA]
gi|298504144|gb|ADI82867.1| DNA gyrase, B subunit [Geobacter sulfurreducens KN400]
Length = 795
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/463 (48%), Positives = 321/463 (69%), Gaps = 13/463 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+++I+VLEGLEAVRKRPAMYIGST +GLHHLVYEI+DN++DEA AGY + + V +
Sbjct: 9 YGADKIKVLEGLEAVRKRPAMYIGSTAAQGLHHLVYEIVDNSIDEALAGYCNEVNVTIHL 68
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D S++V DNGRGIP D+HP K A E LTVLHAGGKF +S Y VSGGLHGVG+SVV
Sbjct: 69 DGSLTVVDNGRGIPTDIHPTEGKPAAEVALTVLHAGGKFDNTS--YKVSGGLHGVGVSVV 126
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS LE+ + RDG Y Q Y+ G P T L + ++GT+I F PD +F T
Sbjct: 127 NALSRKLELEIRRDGKVYRQSYACGDPQTPLEV----MGETKKRGTKITFLPDDTIFETT 182
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+F + ++ R+RELAFLN + I + E E+ +++++ + GG+ +V++LN ++
Sbjct: 183 -EFSFDVLSQRLRELAFLNAGVRITITDE---REEGKHHDFHYEGGIVSFVEYLNRNRTA 238
Query: 317 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LH + F+ + G+ +++ALQ+ +D+Y + + +AN+I T +GGTH+ G +A+LTRT+N
Sbjct: 239 LHPKPIYFKGEKAGVEMEVALQY-NDSYDEKVFSFANNINTHEGGTHLVGFRAALTRTMN 297
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+ ++ +K + +++SGE +REGLT +ISV++P P+FEGQTKT+LGN EV+ V+ +
Sbjct: 298 TYAAANELLKKEKVAISGEDLREGLTAVISVKIPQPQFEGQTKTKLGNSEVKGYVESLMN 357
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L +LE +P + I+ KS+ A +A AA++AR+L R+K L S+LPGKLADC
Sbjct: 358 EKLAVFLEENPKIAKDIIGKSIEAARAREAARKARELTRRKGALDISNLPGKLADCQERD 417
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P E+++VEGDSAGGSAKQGRDR+FQ I+ PL+ I A
Sbjct: 418 PALCELYLVEGDSAGGSAKQGRDRKFQAIL-PLKGKILNVEKA 459
>gi|419684401|ref|ZP_14213002.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 1577]
gi|380667119|gb|EIB82595.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 1577]
Length = 769
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/466 (46%), Positives = 310/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I+V
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S G+ ++ + + GT I FWPD Q+
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGQVISEFGV----IGKSKKTGTTIEFWPDDQI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LNPK+TI + D ++ + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYEILAKRFRELAYLNPKITINFK----DNRVGKHESFHFEGGISQFVTDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKAIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++G+ VREGL I+SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDNKITGDDVREGLIAIVSVKVPEPQFEGQTKGKLGSTYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYLT+Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|419618066|ref|ZP_14151623.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 129-258]
gi|419623918|ref|ZP_14157039.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni LMG 23218]
gi|380595677|gb|EIB16402.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 129-258]
gi|380600068|gb|EIB20416.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni LMG 23218]
Length = 769
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/466 (46%), Positives = 309/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I+V
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTKGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD Q+
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGV----IGKSKKTGTTIEFWPDDQI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LNPK+TI + D ++ + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYEILAKRFRELAYLNPKITINFK----DNRVGKHESFHFEGGISQFVIDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKAIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++GE VREGL ++SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDNKITGEDVREGLIAVVSVKVPEPQFEGQTKGKLGSTYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYLT+Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|281421058|ref|ZP_06252057.1| DNA gyrase, B subunit [Prevotella copri DSM 18205]
gi|281404976|gb|EFB35656.1| DNA gyrase, B subunit [Prevotella copri DSM 18205]
Length = 656
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/458 (49%), Positives = 309/458 (67%), Gaps = 15/458 (3%)
Query: 82 IQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVS 141
IQVLEGLEAVRKRPAMYIG +GLHHLV E +DN++DEA AGY ++IEV + DNS++
Sbjct: 16 IQVLEGLEAVRKRPAMYIGDISEKGLHHLVNETVDNSIDEAMAGYCTDIEVTINEDNSIT 75
Query: 142 VADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSE 201
V DNGRGIP+D+H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS
Sbjct: 76 VEDNGRGIPVDMHEKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALST 133
Query: 202 SLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDH 261
+ V+R G Y Q+Y +GKP+ + V +++GTR +FWPD +FT + +
Sbjct: 134 HMLSQVFRGGKIYQQEYEKGKPLYPVKV----VGETNKRGTRQQFWPDPTIFTHTV-YKW 188
Query: 262 NTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPL-HD 319
+ IA R+RELAFLN + I LR D E + F A GL+E+V++++ + L D
Sbjct: 189 DIIANRMRELAFLNAGIKITLRDLRPDEEGKTKEQVFHAKDGLKEFVRYVDRHRTHLFDD 248
Query: 320 VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGK 379
V+ + + GI I++A+ + +D YS+ + Y N+I TI+GGTH+ G + +LTRTL + +
Sbjct: 249 VIYLKTEKQGIPIEIAVMYNTD-YSENIHSYVNNINTIEGGTHLTGFRMALTRTLKAYAE 307
Query: 380 K----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
SK ++ + ++ E REGLT +IS++V P+FEGQTKT+LGN EV+ V Q+V
Sbjct: 308 ADPTISKQIEKAKVEIAPEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVQGAVQQAVN 367
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L++YLE HPD I K + A A +AA++AR+ V++K+ + LPGKLADCS
Sbjct: 368 EALSDYLEEHPDEAKRICEKVVLAATARIAARKARESVQRKNFMTGGGLPGKLADCSMKD 427
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P+E EIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 428 PKECEIFLVEGDSAGGSAKQGRDRFRQAIL-PLRGKIL 464
>gi|116619148|ref|YP_821304.1| DNA gyrase subunit B [Candidatus Solibacter usitatus Ellin6076]
gi|116222310|gb|ABJ81019.1| DNA gyrase subunit B [Candidatus Solibacter usitatus Ellin6076]
Length = 815
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 240/477 (50%), Positives = 324/477 (67%), Gaps = 20/477 (4%)
Query: 71 NPVS---KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYA 127
NPV Y S I+VLEGLEAVR RPAMYIGSTG GLHHLVYE++DN+VDEA AGYA
Sbjct: 6 NPVGGNGNVYDSSSIKVLEGLEAVRLRPAMYIGSTGEMGLHHLVYEVVDNSVDEALAGYA 65
Query: 128 SNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGG 187
++IEV + DNSV+V D+GRGIP+ +H SA + V+T LHAGGKF S+ Y VSGG
Sbjct: 66 THIEVTIHDDNSVTVEDDGRGIPVGIHEEEGVSAAQVVMTKLHAGGKF--DSNSYKVSGG 123
Query: 188 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 247
LHGVG+S VNALSE LE+ +WR+G + Q+YS GKP L V + R GTR+ F
Sbjct: 124 LHGVGVSCVNALSEKLELEIWREGYTWTQEYSCGKPKADL---VRAGKAGKRTGTRVTFK 180
Query: 248 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 307
PD + A+ F+++T+A R+RELAFLN L I L E DPEK EY GG+ E++
Sbjct: 181 PDSTIMEVAV-FNYDTLAQRLRELAFLNKGLKITLTDERVDPEKVTPFEY--QGGISEFI 237
Query: 308 QWLNTDKKPLHDV-VGFRKDVD-----GITIDLALQWCSDAYSDTMLGYANSIRTIDGGT 361
+ LN K LH+ + F + + IT+++ALQ+ +DAYS+ + +AN+I T+DGGT
Sbjct: 238 KHLNRGKSVLHEKPIHFEAEREMPEKGTITMEVALQY-NDAYSENVFSFANNINTVDGGT 296
Query: 362 HIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 421
H+ G +++LTRT+N+ G+K+ KD +LSG+ VREGLT ++SV+VP P+FEGQTK +L
Sbjct: 297 HLSGFRSALTRTINAFGQKNGLFKDVKENLSGDDVREGLTAVVSVKVPQPQFEGQTKGKL 356
Query: 422 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 481
N ++ + Q V + L+EY + + V I+ K++ A +A AA++ARDL R+K L S
Sbjct: 357 -NSDIAGYMTQFVNDKLSEYFDKNSAVGRKIVGKAIEASRAREAARKARDLTRRKGALDS 415
Query: 482 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKLADC P+ E+F+VEG+SAGG+AKQGR+RRFQ I+ PL+ I A
Sbjct: 416 GGLPGKLADCQEKDPKLCELFLVEGESAGGTAKQGRERRFQAIL-PLKGKILNVEKA 471
>gi|373460688|ref|ZP_09552439.1| DNA gyrase, B subunit [Prevotella maculosa OT 289]
gi|371955306|gb|EHO73110.1| DNA gyrase, B subunit [Prevotella maculosa OT 289]
Length = 656
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/463 (49%), Positives = 308/463 (66%), Gaps = 15/463 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY +++ V L
Sbjct: 11 YSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCTDVAVTLNE 70
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV+V DNGRGIP+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S V
Sbjct: 71 DGSVTVEDNGRGIPVDEHKKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCV 128
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS + V+RDG Y Q+Y +GKP+ + + D++GTR +FWPD +FTT
Sbjct: 129 NALSSHMLSQVFRDGKIYQQEYEKGKPLYPVKV----IGETDKRGTRQQFWPDPAIFTTT 184
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKK 315
F + +A R+RELA+LN + I L + E E F A GL+E+V++++ +
Sbjct: 185 T-FKWDIVASRMRELAYLNAGIRITLTDLRPNEEGKTRQEVFHAKDGLKEFVRYVDRHRT 243
Query: 316 PL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
L DV+ + + GI I++A+ + +D YS+ + Y N+I TI+GGTH+ G +A+LTRTL
Sbjct: 244 HLFDDVIYLKTEKQGIPIEVAIMYNTD-YSENIHSYVNNINTIEGGTHLTGFRAALTRTL 302
Query: 375 NSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
+ +K ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV V
Sbjct: 303 KTYADAEPTIAKQIEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAV 362
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
Q+V E L+ YLE HP I K + A A +AA++AR+ V++KSV+ LPGKLAD
Sbjct: 363 QQAVGEALSNYLEEHPIEAKKICEKVVLAATARIAARKARESVQRKSVMSGGGLPGKLAD 422
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
CS+ P+E EIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 423 CSNKDPKECEIFLVEGDSAGGSAKQGRDRYTQAIL-PLRGKIL 464
>gi|448627574|ref|ZP_21672040.1| DNA gyrase subunit B [Haloarcula vallismortis ATCC 29715]
gi|445758882|gb|EMA10178.1| DNA gyrase subunit B [Haloarcula vallismortis ATCC 29715]
Length = 642
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/465 (49%), Positives = 320/465 (68%), Gaps = 15/465 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S YG++ IQ LEGLEAV+KRPAMYIGST RGLHHLVYE++DNA+DEA AGY NI+V
Sbjct: 5 SDEYGAKSIQTLEGLEAVQKRPAMYIGSTDARGLHHLVYEVVDNAIDEALAGYCDNIDVT 64
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ D SVSV+D+GRGIP+D H + A+E V+T+LHAGGKF S Y VSGGLHGVG+
Sbjct: 65 IHDDGSVSVSDDGRGIPVDTHEEHGRPAVEVVMTILHAGGKFDNKS--YQVSGGLHGVGV 122
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V RDG + Q++ GKP L V ++ + GT +RFWPD ++F
Sbjct: 123 SVVNALSKWLEVEVRRDGALWKQRFDHGKPEYDLK-KVRDLEPDEETGTTVRFWPDDEIF 181
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +F +T++ R+RELAFLN + I++ D + + + GG+ E+V++LN
Sbjct: 182 ETG-EFKFSTLSSRLRELAFLNSGVAISI----IDERDGETETFAYDGGIREFVEYLNET 236
Query: 314 KKPLH-DVVGFRKDVD----GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
K PLH D++ F + + + +++A+Q D ++ +AN+I T +GGTH+ G K
Sbjct: 237 KDPLHRDIIYFEDEEEIAEGPVQVEIAMQGTDDLQG-SIHAFANNINTREGGTHLTGFKT 295
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
SLTR +N + +KD D +L G+ +REGLT +ISV+ P+P+FEGQTKT+LGN EVR
Sbjct: 296 SLTRVINDYATDNNLLKDLDDTLKGDDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRG 355
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+V+ ++ + L + E +PD ++I+ K++ A KA AA++A +L R+KS L S++LPGKL
Sbjct: 356 IVESAMHDGLATFFEENPDTAEAIVGKAVEAAKARKAAQKAEELTRRKSALDSTALPGKL 415
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADC + PEE+E+FI EGDSAGGSAKQGR+ FQ I+ P++ I
Sbjct: 416 ADCQTRDPEEAELFIAEGDSAGGSAKQGRNPDFQAIL-PIKGKIL 459
>gi|282878003|ref|ZP_06286811.1| DNA gyrase, B subunit [Prevotella buccalis ATCC 35310]
gi|281299838|gb|EFA92199.1| DNA gyrase, B subunit [Prevotella buccalis ATCC 35310]
Length = 657
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/463 (49%), Positives = 307/463 (66%), Gaps = 15/463 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY ++IEV +
Sbjct: 11 YSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCTDIEVTIND 70
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D S++V DNGRGIP+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S V
Sbjct: 71 DESITVQDNGRGIPVDQHEKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCV 128
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS + V+RDG Y Q+Y RGK + + + + +GTR +FWPD +FTT
Sbjct: 129 NALSSHMTSQVFRDGKIYQQEYERGKALYPVKV----IGETNLRGTRQQFWPDGSIFTTT 184
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKK 315
F + IA R+RELAFLN + I L + E E F A GL+E+V++++ +
Sbjct: 185 -HFQWDIIARRMRELAFLNAGIRITLTDLRPNEEGKTRTEVFHAKDGLKEFVRYVDRHRT 243
Query: 316 PL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
L DV+ + + GI I++A+ + +D YS+ + Y N+I TI+GGTH+ G +A+LTRTL
Sbjct: 244 HLFDDVIYLKTEKQGIPIEVAIMYNTD-YSENIHSYVNNINTIEGGTHLTGFRAALTRTL 302
Query: 375 NSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
+ SK ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV V
Sbjct: 303 KTYADNDPVISKQIEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAV 362
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
Q+V E LT YLE HP I K + A A +AA++AR+ V++K+V+ LPGKLAD
Sbjct: 363 QQAVGEALTNYLEEHPTEAKQICEKVVLAATARIAARKARESVQRKNVMSGGGLPGKLAD 422
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
CS+ P++ EIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 423 CSNKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAIL-PLRGKIL 464
>gi|419629323|ref|ZP_14162053.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 60004]
gi|419638477|ref|ZP_14170538.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 86605]
gi|380608172|gb|EIB27994.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 60004]
gi|380618669|gb|EIB37787.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 86605]
Length = 769
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/466 (46%), Positives = 310/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I+V
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S G+ ++ + + GT I FWPD Q+
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGQVISEFGV----IGKSKKTGTTIEFWPDDQI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LNPK+TI + D ++ + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYEILAKRFRELAYLNPKITINFK----DNRVGKHESFHFEGGISQFVTDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKAIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++G+ VREGL I+SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDNKITGDDVREGLIAIVSVKVPEPQFEGQTKGKLGSTYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYLT+Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|448352648|ref|ZP_21541429.1| DNA gyrase subunit B [Natrialba hulunbeirensis JCM 10989]
gi|445641927|gb|ELY94998.1| DNA gyrase subunit B [Natrialba hulunbeirensis JCM 10989]
Length = 643
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/461 (49%), Positives = 317/461 (68%), Gaps = 11/461 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ I V++
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDEITVSINE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D+S+SVAD+GRGIP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DDSISVADDGRGIPVDTHEEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TT 255
NALS LE TV RDG Y + G+P+ + V ++ + GT I+FWPD +F TT
Sbjct: 125 NALSSRLETTVKRDGGVYEHAFEIGEPIGDME-RVRDMEPDEETGTEIQFWPDDDIFETT 183
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY--NEYFFAGGLEEYVQWLNTD 313
+ F +T++ R+RELAFLN + I LR E E + Y + GG+ E+V++LN
Sbjct: 184 DMSF--STLSNRLRELAFLNSGVRITLRDERERTEDGEAVAETYEYEGGIREFVEYLNET 241
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
+ +H D++ F + + +++A+Q + ++ +AN+I T +GGTH+ G K +LTR
Sbjct: 242 RSAMHEDIIYFEDEDQNVRVEVAMQ-ATQELQGSIHAFANNINTREGGTHLTGFKTALTR 300
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N G ++ + D + +L GE +REGLT ++SV+ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 301 VVNDYGNENNLLSDIEENLKGEDIREGLTAVVSVKHPDPQFEGQTKTKLGNSEVRGIVEG 360
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
++ + L Y E HPD +I+ K++ A KA AA++A +L R+KS L S+SLPGKLADC
Sbjct: 361 AMHDCLGTYFEEHPDTAQAIVMKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQ 420
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
+ PEE+E+FI EGDSAGGSAKQ R+ FQ ++ P++ I
Sbjct: 421 TKDPEEAELFIAEGDSAGGSAKQARNPEFQAVL-PIKGKIL 460
>gi|419633603|ref|ZP_14166035.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni LMG 23269]
gi|419663083|ref|ZP_14193286.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 1997-4]
gi|419680904|ref|ZP_14209755.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 140-16]
gi|419689837|ref|ZP_14218058.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 1893]
gi|424848964|ref|ZP_18273433.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni D2600]
gi|356487601|gb|EHI17543.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni D2600]
gi|380611851|gb|EIB31393.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni LMG 23269]
gi|380643554|gb|EIB60776.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 1997-4]
gi|380659336|gb|EIB75315.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 140-16]
gi|380670238|gb|EIB85498.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 1893]
Length = 769
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/466 (46%), Positives = 310/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I+V
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S G+ ++ + + GT I FWPD Q+
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGQVISEFGV----IGKSKKTGTTIEFWPDDQI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LNPK+TI + D ++ + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYEILAKRFRELAYLNPKITINFK----DNRVGKHESFHFEGGISQFVTDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKAIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++G+ VREGL I+SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDNKITGDDVREGLIAIVSVKVPEPQFEGQTKGKLGSTYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYLT+Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|386285631|ref|ZP_10062845.1| DNA gyrase subunit B [Sulfurovum sp. AR]
gi|385343339|gb|EIF50061.1| DNA gyrase subunit B [Sulfurovum sp. AR]
Length = 771
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/462 (48%), Positives = 303/462 (65%), Gaps = 13/462 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ I+VL+GLEAVRKRP MYIG T +GLHHLVYE++DN++DEA AG+ I+V L
Sbjct: 4 YGASNIKVLKGLEAVRKRPGMYIGDTSIKGLHHLVYEVVDNSIDEAMAGFCDTIKVTLTK 63
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
+ S + DNGRGIP+ HP SA VLTVLHAGGKF + Y VSGGLHGVG+SVV
Sbjct: 64 EGSAIIEDNGRGIPVKEHPTEKISAATVVLTVLHAGGKFDKDT--YKVSGGLHGVGVSVV 121
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS+ L++T+++DG + Q + +G P L DS + GT+I FWPD+ +F +
Sbjct: 122 NALSKKLDMTIFKDGEIHTQSFQKGIPDAPLESG----DSTRKHGTKIEFWPDETIFKDS 177
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+ F + R +EL +LNPK+TI R E D K Y+ F GG++++V+ +NT K P
Sbjct: 178 VTFQKEILMKRFKELCYLNPKITIDFRDE-RDGTKEVYH---FEGGIKQFVEDMNT-KTP 232
Query: 317 LHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNS 376
L F+ D I ID+AL +C DA S+ L + N+I+T +GGTH G +A LTR++ S
Sbjct: 233 LSTAQFFQGKADDIEIDIALMYC-DADSEKSLSFVNNIKTAEGGTHEAGFRAGLTRSMAS 291
Query: 377 LGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQE 436
K+ K+K ++G+ +EGL CI+SVRVP P+FEGQTK +LG+ VR +V + E
Sbjct: 292 YIAKNANAKEKGTKITGDDCKEGLICIVSVRVPEPQFEGQTKGKLGSSYVRPLVQKFFSE 351
Query: 437 YLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTP 496
+ +YLE P +I+ + L A + AAKRA+DLV++K + +LPGKLADC S P
Sbjct: 352 HFNKYLEETPLEAKAIMGQILLAARGRDAAKRAKDLVKRKDSMSIGTLPGKLADCQSKDP 411
Query: 497 EESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
E SEI++VEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 412 EISEIYLVEGDSAGGSAKQGRDRVFQAIL-PLKGKILNVEKA 452
>gi|302531361|ref|ZP_07283703.1| DNA gyrase, B subunit [Streptomyces sp. AA4]
gi|302440256|gb|EFL12072.1| DNA gyrase, B subunit [Streptomyces sp. AA4]
Length = 655
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/474 (47%), Positives = 314/474 (66%), Gaps = 22/474 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + I VLEGLEAVRKRP MYIGSTG RGLHHLV E++DN+VDEA AGYA+ +EV LLA
Sbjct: 8 YNASSITVLEGLEAVRKRPGMYIGSTGERGLHHLVQEVVDNSVDEAMAGYATKVEVTLLA 67
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D V V D+GRGIP+D+HP K LE VLT+LHAGGKF S Y+VSGGLHGVG+SVV
Sbjct: 68 DGGVRVVDDGRGIPVDIHPKEKKPTLEVVLTILHAGGKF--DSDSYAVSGGLHGVGVSVV 125
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS L + G + Q+Y + + + + GT I FW D +F T
Sbjct: 126 NALSTKLLAEIKVGGRSWRQEY-----LNQVPGPLEDLGPATDTGTTITFWADGDIFETT 180
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKE---DSDPEKNQYNE--------YFFAGGLEE 305
++ TI+ R++E+AFLN LT++LR E D + E++ + Y + GGLE+
Sbjct: 181 T-YNFETISRRLQEMAFLNKGLTLSLRDERVADEETEEDAAGKQARVKEVVYCYPGGLED 239
Query: 306 YVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 364
+V+ +N K P+H+ V+ F G+ +++A+QW + ++ ++ +AN+I T +GGTH E
Sbjct: 240 FVKHINGSKDPIHESVISFDAKGSGLEVEVAMQWNT-GFTPSVYTFANTINTHEGGTHEE 298
Query: 365 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 424
G +A+LTR +N+ ++ K +K+KD +L+G+ VREGL I+S+++ P+FEGQTKT+LGN
Sbjct: 299 GFRAALTRVVNAYAREKKLLKEKDANLTGDDVREGLAAIVSIKLAEPQFEGQTKTKLGNS 358
Query: 425 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 484
E + V Q E+L ++ E +P +I++KS+S+ +A LAA++ARDLVR+K L L
Sbjct: 359 EAKTFVQQQSNEWLGDWFERNPSEAKTIINKSISSAQARLAARKARDLVRRKGALEIGGL 418
Query: 485 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PGKL DC S P E E++IVEGDSAGGSAK+GRD +Q I+ P++ I A
Sbjct: 419 PGKLKDCRSNDPGECELYIVEGDSAGGSAKEGRDSMYQAIL-PIRGKIINVEKA 471
>gi|419620248|ref|ZP_14153693.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 51494]
gi|380601085|gb|EIB21407.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 51494]
Length = 769
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/466 (46%), Positives = 310/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I+V
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S G+ ++ + + GT I FWPD Q+
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGQVISEFGV----IGKSKKTGTTIEFWPDDQI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LNPK+TI + D ++ + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYEILAKRFRELAYLNPKITINFK----DNRVGKHESFHFEGGISQFVTDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKTIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++G+ VREGL I+SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDNKITGDDVREGLIAIVSVKVPEPQFEGQTKGKLGSTYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYLT+Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|89898309|ref|YP_515419.1| DNA gyrase subunit B [Chlamydophila felis Fe/C-56]
gi|89331681|dbj|BAE81274.1| DNA gyrase subunit B [Chlamydophila felis Fe/C-56]
Length = 806
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/475 (48%), Positives = 313/475 (65%), Gaps = 22/475 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
K+Y + I VLEGL+AVR+RP MYIG TG GLHHLVYE++DN++DEA AGY S I V +
Sbjct: 6 KSYDASAITVLEGLQAVRERPGMYIGDTGITGLHHLVYEVVDNSIDEAMAGYCSEIHVRI 65
Query: 135 LADNSVSVADNGRGIPIDLHPATNK------SALETVLTVLHAGGKFGGSSSGYSVSGGL 188
L D ++++DNGRGIPI +H +K SALE VLTVLHAGGKF S Y VSGGL
Sbjct: 66 LEDGGITISDNGRGIPIQVHEKESKKQGRDVSALEVVLTVLHAGGKFDKDS--YKVSGGL 123
Query: 189 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 248
HGVG+S VNAL++ L TV++D Y ++SRG P+T+L + + D+QGT I F+P
Sbjct: 124 HGVGVSCVNALAKKLVATVYKDKQTYQMEFSRGIPLTSLQF----LGATDKQGTEITFYP 179
Query: 249 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQ 308
D ++F++ I FD + + R+RELAFLN +TI ++D D ++ +F+ GG++ +V
Sbjct: 180 DDKIFSSCI-FDRSILIKRLRELAFLNRGVTIIF-EDDRDVSFDKV-VFFYEGGIQSFVS 236
Query: 309 WLNTDKKPLHD----VVGFRKDVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
+LN +K+ L + G R DG I + ALQW S YS+ + YAN+I T GGTH+
Sbjct: 237 YLNQNKESLFPEPIYIAGTRTGDDGEIEFEAALQWNS-GYSELIYSYANNIPTRQGGTHL 295
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
G +LTR LN+ K K+ +SL+GE +REGLT ++SV+VPNP+FEGQTK +LGN
Sbjct: 296 TGFSTALTRVLNAYIKAHNLAKNDKLSLTGEDIREGLTAVVSVKVPNPQFEGQTKQKLGN 355
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
+V V Q E LT + + +P + I+ K A +A AAK+AR+L +KS L S+
Sbjct: 356 SDVGSVAQQITGEMLTTFFDENPQIAKMIVEKVFIAAQAREAAKKARELTLRKSALDSAR 415
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKL DC PE+ E++IVEGDSAGGSAKQGRD RFQ I+ P++ I A
Sbjct: 416 LPGKLIDCLEKDPEKCEMYIVEGDSAGGSAKQGRDHRFQAIL-PIRGKILNVEKA 469
>gi|340759260|ref|ZP_08695832.1| DNA gyrase, B subunit [Fusobacterium varium ATCC 27725]
gi|251835455|gb|EES63995.1| DNA gyrase, B subunit [Fusobacterium varium ATCC 27725]
Length = 635
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 233/467 (49%), Positives = 310/467 (66%), Gaps = 12/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+S Y +E I VLEGLEAVRKRP MYIG+T RGLHHLV+EI+DNAVDEA AGY I V
Sbjct: 1 MSNNYQAENITVLEGLEAVRKRPGMYIGTTSERGLHHLVWEIVDNAVDEALAGYCDKIVV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+L DN + V DNGRGIP+ +HP NKSALE VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 NILPDNIIEVIDNGRGIPVGIHPKYNKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS +VTV DG ++QKY+RG P V + GT +RF D ++
Sbjct: 119 VSVVNALSLWTDVTVKTDGKIWYQKYNRGVP----EEDVKEIGVTTEHGTTVRFKADHEI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F T I +D+NT+ R++ELA+LN L I L +P K + E+ F GG+ ++++ +
Sbjct: 175 FETLI-YDYNTLKNRLKELAYLNKGLEIHLSDSRKEPYKKE--EFKFEGGIVDFLKEITE 231
Query: 313 D-KKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+ +K + + + +VD + +D+A + + S+ + + N+I T +GGTH+ G + +LT
Sbjct: 232 ETEKLIPEPIYMTGEVDNVAVDIAFLYTVNQ-SEIIYSFVNNINTHEGGTHVSGFRTALT 290
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R +N +GK +K+KD L G +REG+T I+SV+VP P+FEGQTKT+LGN EV +V
Sbjct: 291 RVINDVGKAQGYLKEKDGKLQGNDIREGVTAIVSVKVPQPQFEGQTKTKLGNSEVTGIVS 350
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V L LE +P+ I+ K L++ KA AA++AR+LV +KSVL SLPGKLADC
Sbjct: 351 TLVGTNLKIVLEDNPNDTKIIIEKILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADC 410
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SS P+E EI+IVEGDSAGGSAKQGRDR Q I+ PL+ I A
Sbjct: 411 SSKNPDECEIYIVEGDSAGGSAKQGRDRSHQAIL-PLRGKILNVEKA 456
>gi|352516178|ref|YP_004885495.1| DNA gyrase subunit B [Tetragenococcus halophilus NBRC 12172]
gi|348600285|dbj|BAK93331.1| DNA gyrase subunit B [Tetragenococcus halophilus NBRC 12172]
Length = 649
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 233/467 (49%), Positives = 321/467 (68%), Gaps = 19/467 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + QIQVLEGLEAVRKRP MYIGST GLHHLV+EI+DN++DEA AG+A+ I+V +
Sbjct: 15 YDASQIQVLEGLEAVRKRPGMYIGSTSSEGLHHLVWEIVDNSIDEALAGFATEIQVIVEK 74
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNS++V DNGRGIP+D+ T + A+ETV T+LHAGGKFGG S LHGVG SVV
Sbjct: 75 DNSITVTDNGRGIPVDIQNKTGRPAVETVFTILHAGGKFGGGGYKVSGG--LHGVGSSVV 132
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS+ LEV V+++G Y+Q++ RGK +T + + + QGT + F PD ++F
Sbjct: 133 NALSKKLEVKVYKNGQIYYQEFHRGK----VTGDLKVIGETELQGTEVHFEPDSEIFNET 188
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK-- 314
++F + +A RIRELAFLN L I++ ED PE+ Y + GG++ YV+ LN K
Sbjct: 189 VEFSFDKLATRIRELAFLNRGLHISI--EDRRPEEPVVKNYHYEGGIKSYVEHLNASKDV 246
Query: 315 ---KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+P++ + G ++D I +++++Q+ +D+Y ++ +AN+I T +GGTH G K +LT
Sbjct: 247 LFPEPIY-LEGQQQD---INVEVSIQY-TDSYHTNLMTFANNIHTYEGGTHEAGFKTALT 301
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R +N G K K +K+ D +LSGE VREGLT ++SV+ P+P+FEGQTKT+LGN EVR V D
Sbjct: 302 RVINDYGHKQKLMKENDDNLSGEDVREGLTAVVSVKHPDPQFEGQTKTKLGNSEVRTVTD 361
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+ E+ ++L +P + I+ K + A KA AAKRAR++ R+K L S+LPGKLADC
Sbjct: 362 RLFSEHFAKFLMENPSIGRRIVEKGMLASKARQAAKRAREVTRRKGALEISNLPGKLADC 421
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SS PE+SE+FIVEGDSAGGSAKQGR R FQ I+ P++ I A
Sbjct: 422 SSRDPEKSELFIVEGDSAGGSAKQGRSREFQAIL-PIRGKILNVEKA 467
>gi|227485761|ref|ZP_03916077.1| DNA topoisomerase (ATP-hydrolyzing) [Anaerococcus lactolyticus ATCC
51172]
gi|227236316|gb|EEI86331.1| DNA topoisomerase (ATP-hydrolyzing) [Anaerococcus lactolyticus ATCC
51172]
Length = 642
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 234/466 (50%), Positives = 318/466 (68%), Gaps = 14/466 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ Y + I+VLEGLE VR RP MYIGST RGLHHLVYE++DN+VDEA AG I+V
Sbjct: 12 NNNYDAGNIRVLEGLEPVRLRPGMYIGSTSSRGLHHLVYEVVDNSVDEALAGRCDYIKVT 71
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN VSV D+G GIP+ HP T+KS LETVLTVLHAGGKF S Y VSGGLHGVG+
Sbjct: 72 INKDNVVSVEDDGSGIPVKEHPTTHKSTLETVLTVLHAGGKF--DDSAYKVSGGLHGVGV 129
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE L V RDG Y +++RG+ +T + + GT+I F PD ++F
Sbjct: 130 SVVNALSEYLIAEVKRDGHVYKMEFARGE----VTKDIEVIGDTTETGTKITFKPDGEIF 185
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T I F+ + + R RE+AFLN + I D +N + F GG+ E+V +LN +
Sbjct: 186 DTTI-FERSILENRFREMAFLNKGVEIRF----EDERENFETSFKFEGGISEFVSFLNRN 240
Query: 314 KKPLHDVV-GFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K P+ +++ F +GI ++ A Q+ +D YS+ +L YAN+I+T +GGTH+ G+++SLTR
Sbjct: 241 KDPIMEMIPHFDGSQEGIEVEFAFQY-TDGYSENILSYANNIQTPEGGTHLSGLRSSLTR 299
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
++N +K +KD + +L GE +REG+T IISV++ +P+FEGQTK++LGN EVR VVD
Sbjct: 300 SVNDYARKYNFIKDNEENLQGEDIREGITAIISVKISDPQFEGQTKSKLGNSEVRGVVDS 359
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
V E+LT +LE +P SI+ K+L++ +A AA++ARDL R++S+L S++LPGKLADC
Sbjct: 360 YVSEHLTAFLEENPKPAKSIIDKALASRRAREAARKARDLTRKRSILDSATLPGKLADCQ 419
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
ST E+EIFIVEG+SAGGSAK GRD R Q I+ PL+ I A
Sbjct: 420 STDISENEIFIVEGNSAGGSAKGGRDNRIQAIL-PLRGKIMNVEKA 464
>gi|31071475|dbj|BAC76786.1| DNA gyrase B subunit [Nostoc entophytum]
Length = 396
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/401 (56%), Positives = 298/401 (74%), Gaps = 9/401 (2%)
Query: 102 TGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSA 161
TGPRGLHHLVYE++DN++DEA AGY ++IEV + AD SV+V D+GRGIP D H T KSA
Sbjct: 1 TGPRGLHHLVYEVVDNSIDEALAGYCTHIEVDINADGSVTVTDDGRGIPTDTHSRTGKSA 60
Query: 162 LETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG 221
LETV+TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD + Q+Y RG
Sbjct: 61 LETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEVVEVTVWRDKKVHVQRYERG 118
Query: 222 KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIA 281
PVT L + R GT + F PD Q+FTT I+FD+ T++GR+RELA+LN + I
Sbjct: 119 TPVTDLQVKAY---KEARTGTSVTFKPDIQIFTTGIEFDYITLSGRLRELAYLNAGVKIT 175
Query: 282 L---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQ 337
R E + + Y + GG++EY+ ++N +K+PLH+ ++ + + + + ++++LQ
Sbjct: 176 FTDHRLELLKSDTPKVESYEYKGGIKEYIAYMNREKRPLHEEIIYVQGERNNVQVEVSLQ 235
Query: 338 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 397
WC+DAY+D +LG+AN+IRT+DGGTH+EG+KA LTRTLN++ +K +K+ + +LSGEHVR
Sbjct: 236 WCTDAYTDNVLGFANNIRTVDGGTHLEGLKAVLTRTLNAIARKRNKIKENEANLSGEHVR 295
Query: 398 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 457
EGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYL HP V D+IL K++
Sbjct: 296 EGLTAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLGFHPGVADAILDKAI 355
Query: 458 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEE 498
A KAA AA+ AR+LVR+KSVL SS LPGKLADCSS P E
Sbjct: 356 QAFKAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPGE 396
>gi|424825170|ref|ZP_18250157.1| DNA gyrase subunit B [Chlamydophila abortus LLG]
gi|333410269|gb|EGK69256.1| DNA gyrase subunit B [Chlamydophila abortus LLG]
Length = 806
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/475 (48%), Positives = 311/475 (65%), Gaps = 22/475 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
K Y + I VLEGL+AVR+RP MYIG TG GLHHLVYE++DN++DEA AGY S I V +
Sbjct: 6 KNYDASAITVLEGLQAVRERPGMYIGDTGITGLHHLVYEVVDNSIDEAMAGYCSEIHVRI 65
Query: 135 LADNSVSVADNGRGIPIDLHPATNK------SALETVLTVLHAGGKFGGSSSGYSVSGGL 188
L D ++++DNGRGIPI H +K SALE VLTVLHAGGKF S Y VSGGL
Sbjct: 66 LEDGGITISDNGRGIPIQTHEKESKKQGRDVSALEVVLTVLHAGGKFDKDS--YKVSGGL 123
Query: 189 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 248
HGVG+S VNAL+E L TV++D Y ++SRG PVT+L C + + ++QGT I F+P
Sbjct: 124 HGVGVSCVNALAEKLVATVYKDKQAYQMEFSRGVPVTSLQC----LGATNKQGTEITFYP 179
Query: 249 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQ 308
D ++F++ + FD + + R+RELAFLN +TI ++D D ++ +F+ GG++ +V
Sbjct: 180 DNKIFSSCV-FDRSILVKRLRELAFLNRGVTIIF-EDDRDVSFDKV-VFFYEGGIQSFVS 236
Query: 309 WLNTDKKPLHD----VVGFRKDVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
+LN +K+ L + G R DG I + ALQW S YS+ + YAN+I T GGTH+
Sbjct: 237 YLNQNKESLFPEPIYISGSRTGDDGEIEFEAALQWNS-GYSELIYSYANNIPTRQGGTHL 295
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
G +LTR LN+ K K+ + L+GE +REGLT ++SV+VPNP+FEGQTK +LGN
Sbjct: 296 TGFSTALTRVLNAYIKAHNLAKNDKLLLTGEDIREGLTTVVSVKVPNPQFEGQTKQKLGN 355
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
+V V Q E LT + + +P + I+ K A +A AAK+AR+L +KS L S+
Sbjct: 356 SDVGSVSQQITGEALTIFFDENPQIAKMIVDKVFIAAQAREAAKKARELTLRKSTLDSAR 415
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKL DC P + E++IVEGDSAGGSAKQGRDRRFQ I+ P++ I A
Sbjct: 416 LPGKLIDCLEKDPAKCEMYIVEGDSAGGSAKQGRDRRFQAIL-PIRGKILNVEKA 469
>gi|452944779|ref|YP_007500944.1| DNA gyrase, B subunit [Hydrogenobaculum sp. HO]
gi|452883197|gb|AGG15901.1| DNA gyrase, B subunit [Hydrogenobaculum sp. HO]
Length = 786
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/464 (48%), Positives = 308/464 (66%), Gaps = 16/464 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG++ I+V+ GLE VR RP+MYIG RGLHHL++EI+DN+VDEA AGYA++I V +
Sbjct: 4 YGADAIKVVTGLEHVRLRPSMYIGDISERGLHHLIWEIVDNSVDEAMAGYATHIRVHIHQ 63
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D+SV+V DNGRGIP+ +H K A+E VLTVL AGGKF Y SGGLHGVG SVV
Sbjct: 64 DDSVTVEDNGRGIPVYIHKDVGKPAVEVVLTVLGAGGKF--DKKAYQYSGGLHGVGASVV 121
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TT 255
NALSE L V V+RDG Y Q+Y RG P T L + ++GT+I F PD ++F TT
Sbjct: 122 NALSEWLIVEVYRDGKIYRQEYERGVPKTELQI----MGDTTKRGTKITFKPDAEIFETT 177
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
I+FD + RIRELA+LN +T + D N++ Y F G+ E V++L K+
Sbjct: 178 KIKFD--IVEKRIRELAYLNKNVTFEI----IDDRLNKHLVYKFEKGIIELVEYLAEGKE 231
Query: 316 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
PL D V+ DG +++A ++ D Y +++ + N+I+TI+GGTH+ G ++ L++ +
Sbjct: 232 PLFDDVIYIESGKDGTLVEIAFKYTKD-YKESLESFVNNIKTIEGGTHVTGFRSGLSKVV 290
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
+ L + K K+ +GE +REGL ++S +VP P+FEGQTKT+LGN E + +V+
Sbjct: 291 SKLSQNIKISKELKEMFTGEDLREGLVAVVSCKVPEPQFEGQTKTKLGNQETKNIVESIT 350
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E+LT+Y E H D+L I+ K++ A A AAK+A+DLVR+KS L +SLPGKLADCS
Sbjct: 351 VEFLTDYFEKHQDILKLIVEKAIEAALAREAAKKAKDLVRRKSFLEDTSLPGKLADCSEK 410
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P + EIFIVEG+SAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 411 DPSKCEIFIVEGESAGGSAKQGRDRRFQAIL-PLKGKILNVEKA 453
>gi|304439074|ref|ZP_07398993.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Peptoniphilus
duerdenii ATCC BAA-1640]
gi|304372433|gb|EFM26020.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Peptoniphilus
duerdenii ATCC BAA-1640]
Length = 637
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/466 (49%), Positives = 317/466 (68%), Gaps = 12/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ YG+ IQVL GLE VR RP MYIGSTGP+GLHHL+YE++DN++DEA G IEV
Sbjct: 4 NRHYGAGDIQVLTGLEPVRLRPGMYIGSTGPKGLHHLIYEVVDNSIDEALQGMCDTIEVT 63
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+L D SVSV+DNG GIP++ HP T KS +ETVLT+LHAGGKF Y VSGGLHGVG+
Sbjct: 64 ILKDGSVSVSDNGSGIPVEKHPQTGKSTVETVLTILHAGGKF--KEGAYKVSGGLHGVGV 121
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS L V R+ Y Q++SRG P T L V+ +D GT I F PD ++F
Sbjct: 122 SVVNALSTKLVAEVKRNKKLYRQEFSRGVPQTEL--EVVEDLKEDVTGTTIIFHPDPEIF 179
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T ++F+ + R RE+AFLN + I E D ++ + + GG++ +V+++N
Sbjct: 180 ET-VEFEFEVLEKRFREMAFLNKNVKIIFTDERVDRQEI----FHYEGGIKSFVEYINRK 234
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K +H DV+ F + + +++A+Q+ +D+YS+ +L +AN+I T +GGTH+ G +AS+TR
Sbjct: 235 KTKIHKDVIYFEELAENTQVEVAIQY-TDSYSENVLTFANNINTEEGGTHLSGFRASVTR 293
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
T+N G+K +K+K+ +LSG+ VREG+T IISV++PNP+FEGQTK++LGN E R +VD
Sbjct: 294 TINDYGRKYNIIKEKEENLSGDDVREGMTAIISVKIPNPQFEGQTKSKLGNSETRGIVDG 353
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
V LT YLE +P V IL K+L A +A AA++ARDL R++S+L S +LPGKL DC
Sbjct: 354 VVSNGLTAYLEENPKVAKIILDKALQARRAREAARKARDLTRKRSILDSMTLPGKLKDCH 413
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
+ +EIF+VEGDSAGG+AK GRD Q ++ PL+ I A
Sbjct: 414 ESDISVNEIFLVEGDSAGGTAKDGRDSNIQAVL-PLRGKIMNVEKA 458
>gi|344211462|ref|YP_004795782.1| DNA gyrase subunit B [Haloarcula hispanica ATCC 33960]
gi|343782817|gb|AEM56794.1| DNA gyrase subunit B [Haloarcula hispanica ATCC 33960]
Length = 642
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/465 (49%), Positives = 320/465 (68%), Gaps = 15/465 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S YG++ IQ LEGLEAV+KRPAMYIGST RGLHHLVYE++DNA+DEA AGY NI+V
Sbjct: 5 SDEYGAKSIQTLEGLEAVQKRPAMYIGSTDARGLHHLVYEVVDNAIDEALAGYCDNIDVT 64
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ D SVSV+D+GRGIP+D H + A+E V+T+LHAGGKF S Y VSGGLHGVG+
Sbjct: 65 IHDDGSVSVSDDGRGIPVDTHEEHGRPAVEVVMTILHAGGKFDNKS--YQVSGGLHGVGV 122
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V RDG + Q++ GKP L V ++ + GT +RFWPD ++F
Sbjct: 123 SVVNALSKWLEVEVRRDGALWKQRFDHGKPEYDLK-KVRDLEPDEETGTTVRFWPDDEIF 181
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +F +T++ R+RELAFLN + I++ D + + + GG+ E+V++LN
Sbjct: 182 ETG-EFKFSTLSSRLRELAFLNSGVAISI----IDERDGETETFAYDGGIREFVEYLNET 236
Query: 314 KKPLH-DVVGFRKDVD----GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
K PLH D++ F + + + +++A+Q D ++ +AN+I T +GGTH+ G K
Sbjct: 237 KDPLHRDIIYFEDEEEIAEGPVQVEIAMQGTDDLQG-SIHAFANNINTREGGTHLTGFKT 295
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
SLTR +N + +KD D +L G+ +REGLT +ISV+ P+P+FEGQTKT+LGN EVR
Sbjct: 296 SLTRVVNDYATDNNLLKDLDDTLKGDDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRG 355
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+V+ ++ + L + E +PD ++I+ K++ A KA AA++A +L R+KS L S++LPGKL
Sbjct: 356 IVESAMHDGLATFFEENPDTAEAIVGKAVEAAKARKAAQKAEELTRRKSALDSTALPGKL 415
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADC + PEE+E+FI EGDSAGGSAKQGR+ FQ I+ P++ I
Sbjct: 416 ADCQTRDPEEAELFIAEGDSAGGSAKQGRNPDFQAIL-PIKGKIL 459
>gi|448358868|ref|ZP_21547542.1| DNA gyrase subunit B [Natrialba chahannaoensis JCM 10990]
gi|445644548|gb|ELY97561.1| DNA gyrase subunit B [Natrialba chahannaoensis JCM 10990]
Length = 643
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/461 (49%), Positives = 316/461 (68%), Gaps = 11/461 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ I V++
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDEITVSINE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSVAD+GRGIP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVADDGRGIPVDTHEEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TT 255
NALS LE TV RDG Y + G+PV + V + + GT I+FWPD+ +F TT
Sbjct: 125 NALSTRLETTVKRDGGVYKHAFEIGEPVGDME-RVRDMKPDEETGTEIQFWPDEDIFETT 183
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY--NEYFFAGGLEEYVQWLNTD 313
+ F +T++ R+RELAFLN + I LR E E + Y + GG+ E+V++LN
Sbjct: 184 DMSF--STLSNRLRELAFLNSGVRITLRDERERTEAGEAVAETYEYEGGIREFVEYLNET 241
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
+ +H D++ F + + +++A+Q + ++ +AN+I T +GGTH+ G K +LTR
Sbjct: 242 RSAMHEDIIYFEDEDQNVRVEVAIQ-ATKELQGSIHAFANNINTREGGTHLTGFKTALTR 300
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N G ++ + D + +L GE +REGLT ++SV+ P+P+FEGQTKT+LGN EVR +V+
Sbjct: 301 VINDYGNENNLLSDIEENLKGEDIREGLTAVVSVKHPDPQFEGQTKTKLGNSEVRGIVEG 360
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
++ + L Y E HPD +I+ K++ A KA AA++A +L R+KS L S+SLPGKLADC
Sbjct: 361 AMHDCLGTYFEEHPDTAQAIVMKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQ 420
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
+ PEE+E+FI EGDSAGGSAKQ R+ FQ ++ P++ I
Sbjct: 421 TKDPEEAELFIAEGDSAGGSAKQARNPEFQAVL-PIKGKIL 460
>gi|448667078|ref|ZP_21685679.1| DNA gyrase subunit B [Haloarcula amylolytica JCM 13557]
gi|445770600|gb|EMA21659.1| DNA gyrase subunit B [Haloarcula amylolytica JCM 13557]
Length = 642
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/465 (49%), Positives = 320/465 (68%), Gaps = 15/465 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S YG++ IQ LEGLEAV+KRPAMYIGST RGLHHLVYE++DNA+DEA AGY NI+V
Sbjct: 5 SDEYGAKSIQTLEGLEAVQKRPAMYIGSTDARGLHHLVYEVVDNAIDEALAGYCDNIDVT 64
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ D SVSV+D+GRGIP+D H + A+E V+T+LHAGGKF S Y VSGGLHGVG+
Sbjct: 65 IHDDGSVSVSDDGRGIPVDTHEEHGRPAVEVVMTILHAGGKFDNKS--YQVSGGLHGVGV 122
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V RDG + Q++ GKP L V ++ + GT +RFWPD ++F
Sbjct: 123 SVVNALSKWLEVEVRRDGALWKQRFDHGKPEYDLK-KVRDLEPDEETGTTVRFWPDDEIF 181
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +F +T++ R+RELAFLN + I++ D + + + GG+ E+V++LN
Sbjct: 182 ETG-EFKFSTLSSRLRELAFLNSGVAISI----IDERDGETETFAYDGGIREFVEYLNET 236
Query: 314 KKPLH-DVVGFRKDVD----GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
K PLH D++ F + + + +++A+Q D ++ +AN+I T +GGTH+ G K
Sbjct: 237 KDPLHRDIIYFEDEEEIAEGPVQVEIAMQGTDDLQG-SIHAFANNINTREGGTHLTGFKT 295
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
SLTR +N + +KD D +L G+ +REGLT +ISV+ P+P+FEGQTKT+LGN EVR
Sbjct: 296 SLTRVVNDYATDNNLLKDLDDTLKGDDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRG 355
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+V+ ++ + L + E +PD ++I+ K++ A KA AA++A +L R+KS L S++LPGKL
Sbjct: 356 IVESAMHDGLATFFEENPDTAEAIVGKAVEAAKARKAAQKAEELTRRKSALDSTALPGKL 415
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADC + PEE+E+FI EGDSAGGSAKQGR+ FQ I+ P++ I
Sbjct: 416 ADCQTRDPEEAELFIAEGDSAGGSAKQGRNPDFQAIL-PIKGKIL 459
>gi|31071479|dbj|BAC76788.1| DNA gyrase B subunit [Chlorogloeopsis fritschii PCC 6912]
Length = 396
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/401 (56%), Positives = 298/401 (74%), Gaps = 9/401 (2%)
Query: 102 TGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSA 161
TGPRGLHHLVYE++DN++DEA AGY +++EV L AD SV+V D+GRGIP D+HP T KSA
Sbjct: 1 TGPRGLHHLVYEVVDNSIDEALAGYCTHVEVDLNADGSVTVTDDGRGIPTDIHPQTGKSA 60
Query: 162 LETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG 221
LETVLTVLHAGGKFGG S LHGVG+SVVNALSE +EV VWRD Y Q+Y RG
Sbjct: 61 LETVLTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVEVKVWRDKKVYAQRYERG 118
Query: 222 KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIA 281
PVT LT ++R GT + F PD Q+FTT +FD+ T+A R+RELA+LN + I
Sbjct: 119 VPVTELTAKPY---KENRTGTSVNFKPDPQIFTTDTEFDYITLASRLRELAYLNAGVKIT 175
Query: 282 L---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQ 337
R + ++ + Y + GG+ EY+ ++ DK+PLH+ V+ + + + + ++++LQ
Sbjct: 176 FTDYRLQLLKSDQPKVETYEYEGGIREYIAYMIADKQPLHEEVIYVQGERNNVQVEVSLQ 235
Query: 338 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 397
WC+DAY+D +LG+AN+IRT+DGGTH+EG+KA LTRTLN++ +K +K+ + +LSGEHVR
Sbjct: 236 WCTDAYTDNVLGFANNIRTVDGGTHLEGLKAVLTRTLNAIARKRNKIKENEPNLSGEHVR 295
Query: 398 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 457
EGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE P + D+IL K++
Sbjct: 296 EGLTGVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGESLTEYLEFRPSIADAILDKAI 355
Query: 458 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEE 498
A KAA AA+ AR+LVR+KSVL SS LPGKLADCS+ P E
Sbjct: 356 QAFKAAEAARHARELVRRKSVLESSPLPGKLADCSTRDPRE 396
>gi|389844097|ref|YP_006346177.1| DNA gyrase subunit B [Mesotoga prima MesG1.Ag.4.2]
gi|387858843|gb|AFK06934.1| DNA gyrase, B subunit [Mesotoga prima MesG1.Ag.4.2]
Length = 631
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/467 (48%), Positives = 304/467 (65%), Gaps = 14/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+S Y ++ I++L+GL+ VRKRP MYIGSTG GLHHLVYEI+DN++DEA G+ I +
Sbjct: 1 MSDLYNAQNIKILKGLDPVRKRPGMYIGSTGKSGLHHLVYEIVDNSIDEAMGGFCDRINI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ D SV V+DNGRGIPID+HP T SALE V+T LHAGGKF S Y +SGGLHGVG
Sbjct: 61 VITEDGSVIVSDNGRGIPIDIHPDTGTSALEVVMTTLHAGGKF--SKDSYKISGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
SVVNALSE + V V DG Y QKY RGK + + V + GT F PD V
Sbjct: 119 ASVVNALSEWMIVEVMVDGKIYRQKYERGKALAPVEV----VGETNETGTVTSFKPDPLV 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FT FD + + R +ELA+LN + I D + Y F GG+ E+V+ L
Sbjct: 175 FTVT-DFDFDILEARFKELAYLNGGIKITF----EDRRIGEKRSYHFEGGIVEFVKALTK 229
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+KK +H D + + + I LA+Q+ S +Y + +L + N+I+TI+GGTH+ G K LT
Sbjct: 230 NKKSIHKDPIYLEGTYNDVKIQLAMQYTS-SYDEDILTFVNNIKTIEGGTHLTGFKTVLT 288
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
+T+N +G+K +KDKD +L GE +REGL+ I+SV V P+FEGQTK +LGN E + V
Sbjct: 289 KTMNDVGRKHNVLKDKDPNLQGEDLREGLSAILSVFVKEPQFEGQTKAKLGNDEAFEAVM 348
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+ V+E L EY + + L +ILSK+L A +A LAAK+AR++VR+K+ L +++LPGKLADC
Sbjct: 349 KVVKEKLEEYFDYNQKDLKAILSKALEASRARLAAKKAREMVRRKNALENTTLPGKLADC 408
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S +E+EIFIVEGDSAGGSAK R R Q I+ PL+ I A
Sbjct: 409 ISENLDETEIFIVEGDSAGGSAKMARSRETQAIL-PLRGKILNVEKA 454
>gi|253681222|ref|ZP_04862020.1| DNA gyrase, B subunit [Clostridium botulinum D str. 1873]
gi|253562460|gb|EES91911.1| DNA gyrase, B subunit [Clostridium botulinum D str. 1873]
Length = 636
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 238/460 (51%), Positives = 327/460 (71%), Gaps = 13/460 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y QIQVLEGLEAVRKRP MYIGSTG RGLHHLVYEI+DN++DEA AG+ NI+V +
Sbjct: 5 QVYDESQIQVLEGLEAVRKRPGMYIGSTGIRGLHHLVYEIVDNSIDEALAGFCQNIKVYI 64
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DNSV+V D+GRG+P+ +HP + +E ++TVLHAGGKFGG S LHGVG S
Sbjct: 65 HKDNSVTVKDDGRGMPVGIHPKMKRPTVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGAS 122
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS+ +V V R+G + Q+Y +GK + L + D +GT + F PD ++F
Sbjct: 123 VVNALSKYCKVEVRREGHIWMQEYKKGKVASELEI----IGDSDEKGTLVYFEPDDEIFE 178
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
+QFD++T+A R+RELAFLN + I L E + EK Q E+ + GG++ +V +LN +K
Sbjct: 179 -EVQFDYDTLAHRLRELAFLNKGIRITLIDE-REEEKKQ--EFHYEGGIKSFVSYLNRNK 234
Query: 315 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+ LH D + + D +++ALQ+ +D Y+D + +AN+I TI+GGTH+ G K++LTR
Sbjct: 235 QTLHEDPIYVEGNKDDYLVEVALQY-NDTYNDNIFAFANNIDTIEGGTHLAGFKSALTRA 293
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
LN ++ +K+ D +LSG+ REGLT +ISV++ +P+FEGQTKT+LGN EVR +VD
Sbjct: 294 LNDYARRYGYLKEADKNLSGDDTREGLTAVISVKLTDPQFEGQTKTKLGNTEVRGIVDSI 353
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
V E ++E+LE +P+ +++ KSL+A +A AAK+AR+L R+KSVL S++LPGKLADCSS
Sbjct: 354 VFERVSEFLEENPNTAKTVIEKSLTAARAREAAKKARELTRRKSVLESTALPGKLADCSS 413
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P E EI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 414 KDPSECEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIM 452
>gi|322385201|ref|ZP_08058848.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
cristatus ATCC 51100]
gi|417921915|ref|ZP_12565405.1| DNA gyrase, B subunit [Streptococcus cristatus ATCC 51100]
gi|321270825|gb|EFX53738.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
cristatus ATCC 51100]
gi|342833800|gb|EGU68080.1| DNA gyrase, B subunit [Streptococcus cristatus ATCC 51100]
Length = 649
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/475 (48%), Positives = 328/475 (69%), Gaps = 11/475 (2%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
TE +++ ++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA A
Sbjct: 2 TEEKQQDIQAQEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALA 61
Query: 125 GYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 184
G+A++I+V + DNS++V D+GRGIP+D+ T + A+ETV TVLHAGGKFGG S
Sbjct: 62 GFATHIQVFIEKDNSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSG 121
Query: 185 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 244
LHGVG SVVNALS L+V V+++G ++Q+Y RG+ V L + DR GT +
Sbjct: 122 G--LHGVGSSVVNALSTQLDVRVYKNGQIHYQEYRRGQVVADLEI----IGETDRTGTTV 175
Query: 245 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 304
F PD ++FT ++FD + R++ELAFLN L I++ + E Q +Y + GG+
Sbjct: 176 HFTPDPEIFTETVEFDFEKLNKRVQELAFLNRGLRISITDKRDGME--QVKDYHYEGGIA 233
Query: 305 EYVQWLNTDKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
YVQ++N +K + + + ++D IT+++A+Q+ + Y +T++ +AN+I T +GGTH
Sbjct: 234 SYVQYINENKDVIFETPIYTDGEMDDITVEVAMQYTT-GYHETVMSFANNIHTHEGGTHE 292
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
+G + +LTR +N KK+K +K+ + +L+GE VREGLT +ISV+ PNP+FEGQTKT+LGN
Sbjct: 293 QGFRTALTRVINDYAKKNKLLKENEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGN 352
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
EV K+ ++ E +++L +P V I+ K + A KA +AAKRAR++ R+KS L S+
Sbjct: 353 SEVVKITNRLFSEAFSDFLLENPAVARKIVEKGILASKARIAAKRAREVTRKKSGLEISN 412
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKLADCSS P+E+E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 413 LPGKLADCSSNNPQETELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 466
>gi|440782434|ref|ZP_20960451.1| DNA gyrase subunit B [Clostridium pasteurianum DSM 525]
gi|440219958|gb|ELP59167.1| DNA gyrase subunit B [Clostridium pasteurianum DSM 525]
Length = 636
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/462 (49%), Positives = 319/462 (69%), Gaps = 20/462 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y QIQVLEGLEAVRKRP MYIGST +GLHHLVYEI+DN++DEA AG+ NI V +
Sbjct: 7 NYDESQIQVLEGLEAVRKRPGMYIGSTSLKGLHHLVYEIVDNSIDEALAGFCKNINVVIH 66
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNSVSV D+GRG+P+ +H NK +E ++TVLHAGGK GY VSGGLHGVG SV
Sbjct: 67 KDNSVSVTDDGRGMPVGIHHKMNKPTVEVIMTVLHAGGK--FGGGGYKVSGGLHGVGASV 124
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALSE+ EV V R+G + Q Y RG + + + GT+I F PD ++F
Sbjct: 125 VNALSETCEVIVKREGHIWRQMYHRGNVASPFE----KIGDTEEHGTKINFKPDPEIFD- 179
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
I+F+++T+A R+RELAFLN + I E D ++ + + GG++ +V +LN +K+
Sbjct: 180 EIEFNYDTLAQRLRELAFLNKGIKINFVDERQDKKE----VFHYEGGIKSFVSYLNRNKE 235
Query: 316 PLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
P+ + G++ + +++ALQ+ +D Y++ + +AN+I T++GGTH+ G K +LT
Sbjct: 236 PIFPEPIYIEGYKNEY---MVEIALQY-NDGYAENLFSFANNIDTVEGGTHLSGFKTALT 291
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R LN +K +K+ D + SGE +REGLT ++SV++P+P+FEGQTKT+LGN EVR +VD
Sbjct: 292 RVLNDYARKFNFIKENDKNFSGEDIREGLTAVVSVKLPDPQFEGQTKTKLGNSEVRGIVD 351
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+ E ++ +LE +P + I+ K++ A +A AAK+AR+L R+KSVL +++LPGKLADC
Sbjct: 352 SILGENVSAFLEENPQIAKIIIDKAMLASRARDAAKKARELTRRKSVLETTALPGKLADC 411
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
SS P E EI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 412 SSKDPAECEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIM 452
>gi|23978251|dbj|BAC21117.1| DNA gyrase B subunit [Chlorogloeopsis sp. PCC 6718]
Length = 396
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/401 (56%), Positives = 298/401 (74%), Gaps = 9/401 (2%)
Query: 102 TGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSA 161
TGPRGLHHLVYE++DN++DEA AGY +++EV L AD SV+V D+GRGIP D+HP T KSA
Sbjct: 1 TGPRGLHHLVYEVVDNSIDEALAGYCTHVEVDLNADGSVTVTDDGRGIPTDIHPQTGKSA 60
Query: 162 LETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG 221
LETVLTVLHAGGKFGG S LHGVG+SVVNALSE +EV VWRD Y Q+Y RG
Sbjct: 61 LETVLTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVEVKVWRDKKVYAQRYERG 118
Query: 222 KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIA 281
PVT LT ++R GT + F PD Q+FTT +FD+ T+A R+RELA+LN + I
Sbjct: 119 VPVTELTAKPY---KENRTGTSVNFKPDPQIFTTDTEFDYITLASRLRELAYLNAGVKIT 175
Query: 282 L---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQ 337
R + ++ + Y + GG+ EY+ ++N DK+PLH+ ++ + + + + ++++LQ
Sbjct: 176 FTDYRLQLLKSDQPKVETYEYKGGICEYIAYMNADKQPLHEEIIYVQGERNNVQVEVSLQ 235
Query: 338 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 397
WC+DAY+D +LG+AN+IRT+DGGTH+EG+KA LTRTLN++ +K +K+ + +LSGEHVR
Sbjct: 236 WCTDAYTDNVLGFANNIRTVDGGTHLEGLKAVLTRTLNAIARKRNKIKENEPNLSGEHVR 295
Query: 398 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 457
EGLT +ISV VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE P + D+IL K++
Sbjct: 296 EGLTGVISVNVPDPEFEGQTKTKLGNTEVRGIVDSLVGESLTEYLEFRPRIADAILDKAI 355
Query: 458 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEE 498
A KAA AA+ AR+LVR+KSVL SS LPGKLADCS+ P E
Sbjct: 356 QAFKAAEAARHARELVRRKSVLESSPLPGKLADCSTRDPRE 396
>gi|153951349|ref|YP_001397276.1| DNA gyrase subunit B [Campylobacter jejuni subsp. doylei 269.97]
gi|152938795|gb|ABS43536.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. doylei 269.97]
Length = 769
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/466 (46%), Positives = 309/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I+V
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+ Y Q++S GK ++ + + GT I FWPD Q+
Sbjct: 119 VSVVNALSKKLVATVERNKEIYRQEFSEGKVISEFGV----IGKSKKTGTTIEFWPDDQI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LNPK+TI + D ++ + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYEILAKRFRELAYLNPKITINFK----DNRVGKHESFHFEGGISQFVTDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKAIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++GE VREGL ++SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDNKITGEDVREGLIAVVSVKVPEPQFEGQTKGKLGSTYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYLT+Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLTKYFEENPVEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|406593456|ref|YP_006740635.1| DNA gyrase subunit B [Chlamydia psittaci NJ1]
gi|405789328|gb|AFS28070.1| DNA gyrase, B subunit [Chlamydia psittaci NJ1]
Length = 806
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/475 (48%), Positives = 311/475 (65%), Gaps = 22/475 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
K Y + I VLEGL+AVR+RP MYIG TG GLHHLVYE++DN++DEA AGY S I V +
Sbjct: 6 KNYDASAITVLEGLQAVRERPGMYIGDTGITGLHHLVYEVVDNSIDEAMAGYCSEIHVRI 65
Query: 135 LADNSVSVADNGRGIPIDLHPATNK------SALETVLTVLHAGGKFGGSSSGYSVSGGL 188
L D ++++DNGRGIPI +H +K SALE VLTVLHAGGKF S Y VSGGL
Sbjct: 66 LEDGGITISDNGRGIPIQIHEKESKKQGRDVSALEVVLTVLHAGGKFDKDS--YKVSGGL 123
Query: 189 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 248
HGVG+S VNAL+E L TV++D Y ++SRG PVT L + + D+QGT I F+P
Sbjct: 124 HGVGVSCVNALAEKLVATVYKDKQAYQMEFSRGVPVTGLQL----LGATDKQGTEITFYP 179
Query: 249 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQ 308
D ++F++ + FD + + R+RELAFLN +TI ++D D ++ +F+ GG++ +V
Sbjct: 180 DNKIFSSCV-FDRSILIKRLRELAFLNRGITIIF-EDDRDVSFDKVI-FFYEGGIQSFVS 236
Query: 309 WLNTDKKPLHD----VVGFRKDVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
+LN +K+ L + G R DG I + ALQW S YS+ + YAN+I T GGTH+
Sbjct: 237 YLNQNKESLFPEPIYISGSRTGDDGDIEFEAALQWNS-GYSELIYSYANNIPTRQGGTHL 295
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
G +LTR LN+ K K+ +SL+GE +REGLT ++SV+VPNP+FEGQTK +LGN
Sbjct: 296 TGFSTALTRVLNAYIKAHNLAKNDKLSLTGEDIREGLTAVVSVKVPNPQFEGQTKQKLGN 355
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
+V V Q E LT + + +P + I+ K A +A AAK+AR+L +KS L S+
Sbjct: 356 SDVGSVSQQITGEALTIFFDENPQIAKMIVEKVFIAAQAREAAKKARELTLRKSALDSAR 415
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKL DC P + E++IVEGDSAGGSAKQGRDRRFQ I+ P++ I A
Sbjct: 416 LPGKLIDCLEKDPAKCEMYIVEGDSAGGSAKQGRDRRFQAIL-PIRGKILNVEKA 469
>gi|407460701|ref|YP_006738476.1| DNA gyrase subunit B [Chlamydia psittaci WC]
gi|405787090|gb|AFS25834.1| DNA gyrase, B subunit [Chlamydia psittaci WC]
Length = 807
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/475 (49%), Positives = 311/475 (65%), Gaps = 22/475 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
K Y + I VLEGL+AVR+RP MYIG TG GLHHLVYE++DN++DEA AGY S I V +
Sbjct: 7 KNYDASAITVLEGLQAVRERPGMYIGDTGITGLHHLVYEVVDNSIDEAMAGYCSEIHVRI 66
Query: 135 LADNSVSVADNGRGIPIDLHPATNK------SALETVLTVLHAGGKFGGSSSGYSVSGGL 188
L D ++++DNGRGIPI H +K SALE VLTVLHAGGKF S Y VSGGL
Sbjct: 67 LEDGGITISDNGRGIPIQTHEKESKKQGRDVSALEVVLTVLHAGGKFDKDS--YKVSGGL 124
Query: 189 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 248
HGVG+S VNAL+E L VTV++D Y ++SRG PVT L + + D+QGT I F+P
Sbjct: 125 HGVGVSCVNALAEKLVVTVYKDKQAYQMEFSRGVPVTGLQL----LGATDKQGTEITFYP 180
Query: 249 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQ 308
D ++F++ + FD + + R+RELAFLN +TI ++D D ++ +F+ GG++ +V
Sbjct: 181 DNKIFSSCV-FDRSILIKRLRELAFLNRGITIIF-EDDRDVSFDKVI-FFYEGGIQSFVS 237
Query: 309 WLNTDKKPLHD----VVGFRKDVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
+LN +K+ L + G R DG I + ALQW S YS+ + YAN+I T GGTH+
Sbjct: 238 YLNQNKESLFPEPIYISGSRTGDDGDIEFEAALQWNS-GYSELIYSYANNIPTRQGGTHL 296
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
G +LTR LN+ K K+ +SL+GE +REGLT ++SV+VPNP+FEGQTK +LGN
Sbjct: 297 TGFSTALTRVLNAYIKAHNLAKNDKLSLTGEDIREGLTAVVSVKVPNPQFEGQTKQKLGN 356
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
+V V Q E LT + + +P + I+ K A +A AAK+AR+L +KS L S+
Sbjct: 357 SDVGSVSQQITGEALTIFFDENPQIAKMIVEKVFIAAQAREAAKKARELTLRKSALDSAR 416
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKL DC P + E++IVEGDSAGGSAKQGRDRRFQ I+ P++ I A
Sbjct: 417 LPGKLIDCLEKDPAKCEMYIVEGDSAGGSAKQGRDRRFQAIL-PIRGKILNVEKA 470
>gi|23978211|dbj|BAC21105.1| DNA gyrase B subunit [Anabaena variabilis]
Length = 396
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/401 (56%), Positives = 297/401 (74%), Gaps = 9/401 (2%)
Query: 102 TGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSA 161
TGPRGLHHLVYE++DN++DEA AGY ++IEV + AD SV+V D+GRGIP D H T KSA
Sbjct: 1 TGPRGLHHLVYEVVDNSIDEALAGYCTHIEVDINADGSVTVTDDGRGIPTDTHSRTGKSA 60
Query: 162 LETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG 221
LETV+TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD + Q+Y RG
Sbjct: 61 LETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEVVEVTVWRDKKVHIQRYERG 118
Query: 222 KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIA 281
PVT L + R GT + F PD Q+FT +I+FD+ T++ R+RELA+LN + I
Sbjct: 119 IPVTELIAKPY---KEARTGTSVSFKPDSQIFTNSIEFDYITLSSRLRELAYLNAGVKIT 175
Query: 282 L---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQ 337
R E + + Y + GG++EY+ ++N DK+PLH+ ++ + + + + I+++LQ
Sbjct: 176 FTDNRLELLKSDTPKVESYEYKGGIKEYIAYMNRDKQPLHEEIIYVQGERNNVQIEVSLQ 235
Query: 338 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 397
WC+DAY+D +LG+A +IRTIDGGTH+EG+KA LTRTLN++ +K +K+ + +LSGEHVR
Sbjct: 236 WCTDAYTDNVLGFATNIRTIDGGTHLEGLKAVLTRTLNTIARKRNKIKENEANLSGEHVR 295
Query: 398 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 457
EGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE HP + D+IL K++
Sbjct: 296 EGLTAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFHPGIADAILDKAI 355
Query: 458 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEE 498
A KAA AA+ AR+LVR+KSVL SS LPGKLADCSS P E
Sbjct: 356 QAFKAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPSE 396
>gi|315925615|ref|ZP_07921825.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315621156|gb|EFV01127.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 668
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/477 (48%), Positives = 324/477 (67%), Gaps = 15/477 (3%)
Query: 63 IATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEA 122
I +E K N YG++QIQVLEGLEAV++RP MYIGSTG +GLHHLVYE++DNA+DEA
Sbjct: 29 IMSETTKTN---HEYGADQIQVLEGLEAVKRRPGMYIGSTGSQGLHHLVYEVVDNAIDEA 85
Query: 123 QAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGY 182
AGY I V++ DN+V+V D+GRGIP ++ K+ +E LTVLHAGGKFGG
Sbjct: 86 LAGYCDKIIVSVDKDNAVTVMDDGRGIPTGINHKEGKTGVELALTVLHAGGKFGGGGYKV 145
Query: 183 SVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGT 242
S LHGVG+SVVNALSE L V V ++ Y Q + G + L V + +R GT
Sbjct: 146 SGG--LHGVGVSVVNALSEVLTVEVKQNKKVYRQTFEHGNKTSELDV----VGTTNRTGT 199
Query: 243 RIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGG 302
+I F PD ++F T + +D++ + R+RELAFLN + I L+ D P + Q EY +AGG
Sbjct: 200 KIYFKPDPEIFDTTV-YDYDVLEHRLRELAFLNKGVAITLK--DERPGQEQTGEYHYAGG 256
Query: 303 LEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGT 361
+ Y++++N +K PL+ + + K +D ++LA Q+ Y + + YAN+I T +GGT
Sbjct: 257 IRSYIEYMNRNKDPLYPQITYYEKAMDEYALELAFQYTR-GYQENIYSYANNIYTPEGGT 315
Query: 362 HIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 421
H+ G K++LTRT+N+ +K+ +K D +LSG+ VREGLT +IS+++ P+FEGQTKT+L
Sbjct: 316 HLNGFKSALTRTINNYARKAGLLKQNDKNLSGDDVREGLTAVISIKLLEPQFEGQTKTKL 375
Query: 422 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 481
GNPEV+ +V+ V E L+ +LE +P+V +I+ K++SA A +AAKRAR++ R+KS L +
Sbjct: 376 GNPEVKGIVETIVNEELSNFLEENPNVAKAIVEKNISASHARMAAKRAREMTRRKSALDA 435
Query: 482 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
+SLPGKLADC P +SEIFIVEGDSAGGSAK GRD R Q I+ PL+ I A
Sbjct: 436 TSLPGKLADCREKDPAQSEIFIVEGDSAGGSAKVGRDSRIQAIL-PLRGKILNVEKA 491
>gi|258646055|ref|ZP_05733524.1| DNA gyrase, B subunit [Dialister invisus DSM 15470]
gi|260403425|gb|EEW96972.1| DNA gyrase, B subunit [Dialister invisus DSM 15470]
Length = 649
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 237/464 (51%), Positives = 320/464 (68%), Gaps = 14/464 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG++ I+VLEGLEAVR RP MYIGST RGLHHLVYE++DN++DEA AG+ ++IEV L
Sbjct: 21 YGAKDIRVLEGLEAVRLRPGMYIGSTSARGLHHLVYEVVDNSIDEALAGFCTHIEVTLND 80
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D S ++ DNGRGIP LH T K A+E VLTVLHAGGKFGG GY +SGGLHGVG+SVV
Sbjct: 81 DGSCTITDNGRGIPTGLH-ETGKPAMEVVLTVLHAGGKFGGD--GYPISGGLHGVGISVV 137
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
ALSE VTV R+G + K +RG +T H+ GT++ F PD ++F
Sbjct: 138 TALSEWTTVTVKREGHFHEMKLARG----VVTQHMKTFGETTETGTQVTFKPDGEIFKEG 193
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
FD++T+ R+RELAFLN LTI L D + + +AGG+ E++++LN + K
Sbjct: 194 TDFDYDTLKVRMRELAFLNKGLTITL--TDVRDGATHQDVFCYAGGIVEFIKFLN-EGKD 250
Query: 317 LHD--VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
L D V+ F + D + +D+A+Q+ + YS++M + N+I T++GG H+ G + +LTRT+
Sbjct: 251 LVDPGVISFEGEKDRVIVDIAMQYQA-GYSESMYTFVNNINTVEGGMHLTGFRNALTRTI 309
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N + + +K + +LSG+ VREGLTC+ISV+VPNP+FEGQTKT+LGN +V+ +VD V
Sbjct: 310 NDYARSNNLLKPNEENLSGDDVREGLTCVISVKVPNPQFEGQTKTKLGNQDVKGIVDTIV 369
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
+ L YLE HP I+SKS++A +A AA+RAR+L R+K+ L SSLPGKLADCS
Sbjct: 370 SDGLRTYLEEHPAEAKEIISKSITANRAREAARRARELTRRKNALEVSSLPGKLADCSEK 429
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P+ +EI+IVEGDSAGGSAK GRDRR+Q I+ PL+ I A
Sbjct: 430 DPKFTEIYIVEGDSAGGSAKSGRDRRYQAIL-PLRGKILNVEKA 472
>gi|326799865|ref|YP_004317684.1| DNA gyrase B subunit [Sphingobacterium sp. 21]
gi|326550629|gb|ADZ79014.1| DNA gyrase, B subunit [Sphingobacterium sp. 21]
Length = 652
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/473 (47%), Positives = 323/473 (68%), Gaps = 11/473 (2%)
Query: 69 KENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
+EN Y ++ IQVLEGLEAVRKRP+MYIG G +GLHHLVYE++DN++DEA AGY +
Sbjct: 3 EENKNKSNYSADNIQVLEGLEAVRKRPSMYIGDVGVKGLHHLVYEVVDNSIDEALAGYCT 62
Query: 129 NIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 188
+I V + DNS++V DNGRGIP ++ NKSALE V+T+LHAGGKF + Y VSGGL
Sbjct: 63 DIHVIIHKDNSITVEDNGRGIPTGINKKENKSALEMVMTMLHAGGKFDKDT--YKVSGGL 120
Query: 189 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 248
HGVG+S VNALS L V R+G + Q+Y++GKP+ + + DR GT + F P
Sbjct: 121 HGVGVSCVNALSTLLIAEVHREGKIFKQEYAQGKPLYDVKV----IGETDRTGTNVTFHP 176
Query: 249 DKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEY 306
D +FT + ++T+AGR+RELA+LN +LT+ +E+ + ++ E++ GGL E+
Sbjct: 177 DPSIFTMTTTYSYDTLAGRLRELAYLNKGIRLTLLDEREEQEDGALRHEEFYSEGGLSEF 236
Query: 307 VQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 365
V++L+ +++PL D + GI ++LALQ+ +D YS+ + Y N+I TI+GGTH+ G
Sbjct: 237 VKFLDGNRQPLIPDPIHVEGIKQGIPVELALQY-NDTYSENVHSYVNNINTIEGGTHVAG 295
Query: 366 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 425
+ LTRTL + KS +K+ + ++G+ REGLT +ISV+V P+FEGQTKT+LGN E
Sbjct: 296 FRRGLTRTLKAYADKSGLLKNLKVEITGDDFREGLTAVISVKVAEPQFEGQTKTKLGNNE 355
Query: 426 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 485
V VD +V E L YLE +P +I+ K + A +A AA++ARD+V++K+V+ S LP
Sbjct: 356 VMGAVDVAVGEILGTYLEENPREAKAIVQKVIIAAQARAAARKARDMVQRKTVMGGSGLP 415
Query: 486 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
GKLADC++ P + EI++VEGDSAGG+AKQGR+R FQ I+ PL+ I A
Sbjct: 416 GKLADCANNDPAKCEIYLVEGDSAGGTAKQGRNREFQAIL-PLRGKILNVEKA 467
>gi|320547135|ref|ZP_08041431.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
equinus ATCC 9812]
gi|320448261|gb|EFW89008.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
equinus ATCC 9812]
Length = 650
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/467 (49%), Positives = 323/467 (69%), Gaps = 11/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++K Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA AG+A++IEV
Sbjct: 11 LAKEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALAGFATHIEV 70
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V D+GRGIP+D+ T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 71 FIEKDNSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVG 128
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
SVVNALS L+V+V+RDG ++Q+Y RG V L + DR GT + F PD ++
Sbjct: 129 SSVVNALSTQLDVSVYRDGKIHYQEYRRGHVVDDLKV----IGDTDRHGTTVHFTPDGEI 184
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FT I FD + +A RI+ELAFLN L I++ + E+ Q+ Y + GG+ YVQ++N
Sbjct: 185 FTETIVFDFDKLAKRIQELAFLNRGLRISITDKREGIEQEQH--YHYEGGISSYVQFINE 242
Query: 313 DKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K + D + ++DGI++++A+Q+ + Y +T++ +AN+I T +GGTH +G + +LT
Sbjct: 243 NKDVIFDTPIYTDGEMDGISVEVAMQYTT-GYHETVMSFANNIHTHEGGTHEQGFRTALT 301
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R +N +++K +K+KD +L+G+ VREGLT +ISV+ PNP+FEGQTKT+LGN EV K+ +
Sbjct: 302 RVINDYARQNKILKEKDDNLTGDDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVVKITN 361
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+ + + +L +P + I+ K + A KA +AAKRAR++ R+KS L S+LPGKLADC
Sbjct: 362 RLFSDAFSRFLLENPQIAKKIVEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLADC 421
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SS +E+FIVEGDSAGGSAK GRDR Q I+ P++ I A
Sbjct: 422 SSNDVTMNELFIVEGDSAGGSAKSGRDREHQAIL-PIRGKILNVEKA 467
>gi|397780370|ref|YP_006544843.1| DNA gyrase subunit B [Methanoculleus bourgensis MS2]
gi|396938872|emb|CCJ36127.1| DNA gyrase subunit B [Methanoculleus bourgensis MS2]
Length = 656
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 236/488 (48%), Positives = 323/488 (66%), Gaps = 31/488 (6%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ TY + I VLEGL VR+RPAMYIGST RGLHHLVYE++DN+VDEA AG+ I V
Sbjct: 1 MTDTYDASHITVLEGLRPVRERPAMYIGSTEARGLHHLVYEVVDNSVDEALAGFCDLILV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ D S+++ DNGRGIP+D+ P KSALE VLTVLHAGGKF ++ Y VSGGLHGVG
Sbjct: 61 TINRDGSITIEDNGRGIPVDIMPQYGKSALEIVLTVLHAGGKFDKNT--YQVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRG---KPVTTL--TCHVL--------------P 233
+SVVNAL+ L+ TV+RDG Y ++ +G KP+ + T H + P
Sbjct: 119 VSVVNALASWLDATVFRDGNVYEMQFRQGLVVKPLASRPETDHEMKIRYEERYGTRPAQP 178
Query: 234 VDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQ 293
+D + QGTRI F PD+ +F T + FD++ + R+RELA+LN LTI+LR E +
Sbjct: 179 LDYERLQGTRITFQPDRSIFET-VNFDYDMLDHRLRELAYLNSGLTISLRDERTGDAIT- 236
Query: 294 YNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDG---ITIDLALQWCSDAYSDTMLGY 350
Y F GG+ E+V + K+PLHD V + + D + +++ALQ+ +++Y +T+ Y
Sbjct: 237 ---YCFEGGIREFVAHIGEGKEPLHDEVIYFQKSDPESLVEVEVALQY-NNSYGETVYTY 292
Query: 351 ANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPN 410
NS+ T +GGTH+EG ++++TR +N+ +++ K D + GE VREGL +IS RV
Sbjct: 293 VNSVNTREGGTHLEGFRSAITRAINNSARRNNLFKSNDAQVKGEDVREGLASVISTRVAE 352
Query: 411 PEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRAR 470
P+FEGQTK RLGN VR +VD V LTEY E HP L +I+ K+++A +A AA+ AR
Sbjct: 353 PQFEGQTKMRLGNSNVRGIVDSLVYSSLTEYFEEHPKTLQAIVDKAMAAARAREAARNAR 412
Query: 471 DLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQE 530
+L R+KS L ++ LPGKLADC P +SE++IVEGDSAGGSAKQGRDR+FQ I+ PL+
Sbjct: 413 ELARRKSTLETTGLPGKLADCQERDPAKSELYIVEGDSAGGSAKQGRDRKFQAIL-PLRG 471
Query: 531 SIFAFASA 538
I A
Sbjct: 472 KILNVEKA 479
>gi|419548228|ref|ZP_14086858.1| DNA gyrase subunit B [Campylobacter coli 2685]
gi|380527665|gb|EIA53021.1| DNA gyrase subunit B [Campylobacter coli 2685]
Length = 770
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/466 (46%), Positives = 310/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I+V
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD Q+
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGV----IGKSKKTGTTIEFWPDDQI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LNPK+TI + D ++ + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYEILAKRFRELAYLNPKITINFK----DNRVGKHESFHFEGGISQFVTDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKAIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++G+ VREGL ++SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDSKITGDDVREGLIAVVSVKVPEPQFEGQTKGKLGSSYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYL++Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLSKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|302872928|ref|YP_003841561.1| DNA gyrase subunit B [Clostridium cellulovorans 743B]
gi|307687881|ref|ZP_07630327.1| DNA gyrase subunit B [Clostridium cellulovorans 743B]
gi|302575785|gb|ADL49797.1| DNA gyrase, B subunit [Clostridium cellulovorans 743B]
Length = 636
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/463 (49%), Positives = 321/463 (69%), Gaps = 20/463 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
++Y + QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AG+ NI+V +
Sbjct: 6 QSYDASQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSIDEALAGFCKNIDVII 65
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DNS+SV D+GRG+P+ +H N+ A+E ++T+LHAGGKFGG S LHGVG S
Sbjct: 66 HEDNSISVKDDGRGMPVGMHAKMNRPAVEVIMTILHAGGKFGGGGYKVSGG--LHGVGAS 123
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALSE+ VTV DG + Q++ RG T L + + GT + F PD ++F
Sbjct: 124 VVNALSETCIVTVSIDGKIHRQEFHRGNVATELEV----IGETEEHGTEVFFTPDHEIFE 179
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
T ++FD++T+ R+RELAFLN + I++ D ++ + + + GG++ +V +LN +K
Sbjct: 180 T-LEFDYDTLVQRLRELAFLNKGINISI----EDRRNDKSDSFHYDGGIKSFVSYLNRNK 234
Query: 315 KPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 370
+ L + G + D I +++ALQ+ +D Y + + +AN+I T +GGTH+ G K ++
Sbjct: 235 EALFPEPIYIEGIQND---ILVEIALQY-NDTYQENIFSFANNIDTAEGGTHLAGFKNAM 290
Query: 371 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
TR +N +K +K+ D +LSGE VREGLT IISV++P PEFEGQTKT+LGN EVR +V
Sbjct: 291 TRVINDYARKFGFLKENDKNLSGEDVREGLTAIISVKIPEPEFEGQTKTKLGNSEVRGIV 350
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
D + ++ +LE +P V I+ K+L+A +A AAK+AR+L R+KS+L S+SLPGKLAD
Sbjct: 351 DSILGGSVSTFLEENPSVGKIIVDKALTASRAREAAKKARELTRRKSILESTSLPGKLAD 410
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
CSS P E EI+IVEGDSAGGSAKQGR+RRFQ I+ PL+ I
Sbjct: 411 CSSKDPSECEIYIVEGDSAGGSAKQGRNRRFQAIL-PLRGKIM 452
>gi|387789733|ref|YP_006254798.1| DNA gyrase subunit B [Solitalea canadensis DSM 3403]
gi|379652566|gb|AFD05622.1| DNA gyrase, B subunit [Solitalea canadensis DSM 3403]
Length = 653
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/465 (49%), Positives = 316/465 (67%), Gaps = 11/465 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ IQVLEGLEAVRKRPAMYIG G +GLHHLVYE++DN++DEA AG+ ++I V +
Sbjct: 12 YSADNIQVLEGLEAVRKRPAMYIGDVGVKGLHHLVYEVVDNSIDEALAGFCNDIYVTIHK 71
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNS+SV DNGRGIP +H KSALE V+TVLHAGGKF + Y VSGGLHGVG+S V
Sbjct: 72 DNSISVKDNGRGIPTGMHTKEKKSALEVVMTVLHAGGKFDKDT--YKVSGGLHGVGVSCV 129
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS L+ V R+G + Q+Y RGKP V V + GT + F PD ++FT
Sbjct: 130 NALSTHLKAEVHREGKVWVQEYERGKP----QYDVKTVGETNITGTIVTFTPDTEIFTLT 185
Query: 257 IQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
++++T+A R+RELA+LN +LT+ +E +D N YF GGL+E++ +L+ ++
Sbjct: 186 TIYNYDTLAARLRELAYLNKGIRLTLTDERETNDDGSYVVNSYFSEGGLKEFITYLDGNR 245
Query: 315 KPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+PL + + + GI ++LALQ+ S YS+ + Y N+I TI+GGTH+ G + LTRT
Sbjct: 246 EPLIPEPIYIDGNKSGIPVELALQYNS-TYSENVHSYVNNINTIEGGTHVAGFRRGLTRT 304
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
L S +KS +K+ + ++G+ REGLT ++SV+V P+FEGQTKT+LGN EV VDQ+
Sbjct: 305 LKSYAEKSGLLKNLKVEITGDDFREGLTAVVSVKVAEPQFEGQTKTKLGNNEVIGAVDQA 364
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
V E L YLE HP I+ K + A A AA++AR++V++KSV+ S LPGKL+DCS+
Sbjct: 365 VGEILGVYLEEHPKEARLIVQKVVLAATARAAARKAREMVQRKSVMSGSGLPGKLSDCSN 424
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PE E+++VEGDSAGG+AKQGRDR FQ I+ PL+ I A
Sbjct: 425 NDPEACELYLVEGDSAGGTAKQGRDRNFQAIL-PLKGKILNVEKA 468
>gi|23978263|dbj|BAC21120.1| DNA gyrase B subunit [Fischerella muscicola SAG 1427-1 = PCC 73103]
Length = 396
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/401 (57%), Positives = 299/401 (74%), Gaps = 9/401 (2%)
Query: 102 TGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSA 161
TGPRGLHHLVYE++DN++DEA AGY +++EV L AD SV+V D+GRGIP + T KS
Sbjct: 1 TGPRGLHHLVYEVVDNSIDEALAGYCTHVEVDLNADGSVTVTDDGRGIPTGIVAKTGKSG 60
Query: 162 LETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG 221
LETVLTVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD + Q+Y RG
Sbjct: 61 LETVLTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEWVEVTVWRDKNVHTQRYERG 118
Query: 222 KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIA 281
PVT L +V P +R GT + F PD Q+FTT +FD+ T+A R+RELA+LN + I
Sbjct: 119 IPVTEL--NVKPY-KDNRTGTSVSFQPDSQIFTTGTEFDYTTLASRLRELAYLNAGVKIT 175
Query: 282 L---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQ 337
R E ++ + Y + GG+ EY+ ++N DK+PLH+ V+ + + + + +++ALQ
Sbjct: 176 FTDHRLELLKSDQPKVETYEYKGGIREYITYINADKQPLHEEVIYVQGERNNVQVEVALQ 235
Query: 338 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 397
WC+DAY+D +LG+AN+IRT+DGGTH+EG+KA LTRTLN++ +K +KD + +LSGEHVR
Sbjct: 236 WCTDAYTDNVLGFANNIRTVDGGTHLEGLKAVLTRTLNAIARKRNKIKDNEPNLSGEHVR 295
Query: 398 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 457
EGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE HP V D++L K++
Sbjct: 296 EGLTGVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGETLTEYLEFHPSVADAVLDKAI 355
Query: 458 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEE 498
A KAA AA+ AR+LVR+KSVL SS LPGKLADCSS P+E
Sbjct: 356 QAFKAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPKE 396
>gi|281424989|ref|ZP_06255902.1| DNA gyrase, B subunit [Prevotella oris F0302]
gi|299142183|ref|ZP_07035316.1| DNA gyrase, B subunit [Prevotella oris C735]
gi|281400833|gb|EFB31664.1| DNA gyrase, B subunit [Prevotella oris F0302]
gi|298576272|gb|EFI48145.1| DNA gyrase, B subunit [Prevotella oris C735]
Length = 656
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/463 (49%), Positives = 308/463 (66%), Gaps = 15/463 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY +++E+ L
Sbjct: 11 YSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCTDVEITLNE 70
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV+V DNGRGIP+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S V
Sbjct: 71 DGSVTVEDNGRGIPVDEHKKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCV 128
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS + V+RDG Y Q+Y +GKP+ + V ++GTR +FWPD VFTT
Sbjct: 129 NALSSHMLSQVFRDGKIYQQEYEKGKPLYPVKV----VGETTKRGTRQQFWPDPTVFTTT 184
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKK 315
+ + +A R+RELA+LN + I L + E E F A GL+E+V++++ +
Sbjct: 185 T-YKWDIVASRMRELAYLNAGIRITLTDLRPNEEGKTRQEVFHAKDGLKEFVRYVDRHRT 243
Query: 316 PL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
L DV+ + + GI I++A+ + +D YS+ + Y N+I TI+GGTH+ G +A+LTRTL
Sbjct: 244 HLFDDVIYLKTEKQGIPIEVAIMYNTD-YSENIHSYVNNINTIEGGTHLTGFRAALTRTL 302
Query: 375 NSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
+ +K ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV V
Sbjct: 303 KAYADAEPTIAKQIEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAV 362
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
Q+V E L+ YLE HP I K + A A +AA++AR+ V++KSV+ LPGKLAD
Sbjct: 363 QQAVGEALSNYLEEHPIEAKKICEKVVLAATARIAARKARESVQRKSVMTGGGLPGKLAD 422
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
CS+ P+E EIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 423 CSNKDPKECEIFLVEGDSAGGSAKQGRDRYTQAIL-PLRGKIL 464
>gi|448688768|ref|ZP_21694505.1| DNA gyrase subunit B [Haloarcula japonica DSM 6131]
gi|445778638|gb|EMA29580.1| DNA gyrase subunit B [Haloarcula japonica DSM 6131]
Length = 642
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/465 (48%), Positives = 320/465 (68%), Gaps = 15/465 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S YG++ IQ LEGLEAV+KRPAMYIGST RGLHHLVYE++DNA+DEA AG+ NI+V
Sbjct: 5 SDEYGAKSIQTLEGLEAVQKRPAMYIGSTDARGLHHLVYEVVDNAIDEALAGHCDNIDVT 64
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ D SVSV+D+GRGIP+D H + A+E V+T+LHAGGKF S Y VSGGLHGVG+
Sbjct: 65 IHDDGSVSVSDDGRGIPVDTHEEHGRPAVEVVMTILHAGGKFDNKS--YQVSGGLHGVGV 122
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V RDG + Q++ GKP L V ++ + GT +RFWPD ++F
Sbjct: 123 SVVNALSKWLEVEVRRDGALWKQRFDHGKPEYDLK-KVRDLEPDEETGTTVRFWPDDEIF 181
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +F +T++ R+RELAFLN + I++ D + + + GG+ E+V++LN
Sbjct: 182 ETG-EFKFSTLSSRLRELAFLNSGVAISIH----DERDGETETFAYDGGIREFVEYLNET 236
Query: 314 KKPLH-DVVGFRKDVD----GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
K PLH D++ F + + + +++A+Q D ++ +AN+I T +GGTH+ G K
Sbjct: 237 KDPLHRDIIYFEDEEEIAEGPVQVEIAMQGTDDLQG-SIHAFANNINTREGGTHLTGFKT 295
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
SLTR +N + +KD D +L G+ +REGLT +ISV+ P+P+FEGQTKT+LGN EVR
Sbjct: 296 SLTRVVNDYATDNNLLKDLDDTLKGDDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRG 355
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+V+ ++ + L + E +PD ++I+ K++ A KA AA++A +L R+KS L S++LPGKL
Sbjct: 356 IVESAMHDGLATFFEENPDTAEAIVGKAVEAAKARKAAQKAEELTRRKSALDSTALPGKL 415
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADC + PEE+E+FI EGDSAGGSAKQGR+ FQ I+ P++ I
Sbjct: 416 ADCQTRDPEEAELFIAEGDSAGGSAKQGRNPDFQAIL-PIKGKIL 459
>gi|419841535|ref|ZP_14364903.1| DNA gyrase, B subunit [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
gi|386904754|gb|EIJ69539.1| DNA gyrase, B subunit [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
Length = 638
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/464 (48%), Positives = 309/464 (66%), Gaps = 9/464 (1%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
YG++ I VLEGLEAVRKRP MYIG+T RGLHHLV+E++DN+VDEA AGY + I V++L
Sbjct: 3 NYGAQNITVLEGLEAVRKRPGMYIGTTSARGLHHLVWEVVDNSVDEALAGYCNRITVSIL 62
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DN + V DNGRGIP+D+HP KSALE VLTVLHAGGKF + Y VSGGLHGVG+SV
Sbjct: 63 PDNIIQVEDNGRGIPVDIHPKYGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGISV 120
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALSE EV V R+G Y+QKY RGKP+ + + +++ + GT + F PD ++F T
Sbjct: 121 VNALSEWTEVKVKREGNVYYQKYLRGKPIEDVKI-ISALEAGETTGTIVTFKPDIEIFET 179
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
I F++ + R++ELA+LN L I L D E + + F GG+ ++++ + + +
Sbjct: 180 VI-FEYEVLQHRLKELAYLNRGLEINLL--DCRNEIGKKESFQFEGGISDFLKEVTQENQ 236
Query: 316 PL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
L + + + +D+A + + S+ + + N+I T +GG+H+ G + LT+ +
Sbjct: 237 TLLSKQIHIEGQAEQVGVDIAFTYTT-GQSEIIYSFVNNINTTEGGSHVTGFRTCLTKVI 295
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +GK +K+KD L G +REG+ IISV+VP P+FEGQTKT+LGN EV +V+ +
Sbjct: 296 NDIGKNQGFLKEKDGKLQGGDIREGIVAIISVKVPQPQFEGQTKTKLGNSEVSGIVNTVL 355
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
L +LE +P+ I+ K L++ KA AA+RAR+ V +KSVL SLPGKLADCSS
Sbjct: 356 STDLKIFLEDNPNDTKLIIEKILNSKKAREAAQRAREAVLRKSVLEVGSLPGKLADCSSK 415
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PEE EIF+VEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 416 KPEECEIFLVEGDSAGGSAKQGRDRYFQAIL-PLKGKILNVEKA 458
>gi|145592574|ref|YP_001156871.1| DNA gyrase subunit B [Salinispora tropica CNB-440]
gi|145301911|gb|ABP52493.1| DNA gyrase subunit B [Salinispora tropica CNB-440]
Length = 719
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 242/515 (46%), Positives = 336/515 (65%), Gaps = 20/515 (3%)
Query: 32 KPRTNFAIRGVSSQVLTRSNVVLPRAFLSSSIATEAFKENPVS----KTYGSEQIQVLEG 87
+P +R S++ +R PR + + +A +A K V+ + YG+E I VLEG
Sbjct: 32 RPPARMTLRCRSARPTSRPVRRTPRPVVPNGVA-DARKWPRVAAQDKQEYGAESITVLEG 90
Query: 88 LEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGR 147
LEAVRKRP MYIGSTG RGLHHLV+E++DNAVDEA AG+ I+V LLAD V V DNGR
Sbjct: 91 LEAVRKRPGMYIGSTGERGLHHLVWEVVDNAVDEALAGHCDTIDVVLLADGGVRVTDNGR 150
Query: 148 GIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTV 207
G P+D HP K +E LTVLHAGGKF G + Y+VSGGLHGVG+SVVNALS + V +
Sbjct: 151 GFPVDPHPKLKKPGVEVALTVLHAGGKFDGKA--YAVSGGLHGVGVSVVNALSTRMAVEI 208
Query: 208 WRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGR 267
+DG + Q Y+ KP +S D G+ + FWPD +VF T + FD TI R
Sbjct: 209 QKDGYVWRQSYTDSKPTPLEKG-----ESTDATGSAVSFWPDPRVFET-VAFDFQTIYRR 262
Query: 268 IRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGF 323
++E+AFLN LTI R ++ D K + + + GG+ ++V+ LN K +H VV F
Sbjct: 263 LQEMAFLNRGLTIHFLDERVDEGDDGKMREVTFCYQGGIADFVRHLNASKTSIHKSVVEF 322
Query: 324 RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKT 383
+ DG+++++A+QW +++Y +++ +AN+I T +GGTH EG +++LT +N G + +
Sbjct: 323 GTEEDGMSVEIAMQW-NESYGESVYTFANNINTHEGGTHEEGFRSALTSVINRYGAEKRL 381
Query: 384 VKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLE 443
+K D LSGE +REGL IISV++ NP+FEGQTKT+LGN V+ V + E+L ++L+
Sbjct: 382 LK-SDEKLSGEDIREGLAAIISVKLTNPQFEGQTKTKLGNTPVKSFVQRVCNEWLVDWLD 440
Query: 444 LHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFI 503
+P I++K+ A +A +AA++AR L R+KS+L S S+PGKLADC ST P E E+FI
Sbjct: 441 RNPAEAKVIITKASQAARARVAAQQARKLARRKSLLESGSMPGKLADCQSTDPRECEVFI 500
Query: 504 VEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
VEGDSAGGSAKQGRD R Q I+ P++ I A
Sbjct: 501 VEGDSAGGSAKQGRDPRTQAIL-PIRGKILNVEKA 534
>gi|393809323|gb|AFN25835.1| DNA gyrase subunit B [Staphylococcus hominis]
gi|393809333|gb|AFN25840.1| DNA gyrase subunit B [Staphylococcus hominis]
gi|393809337|gb|AFN25842.1| DNA gyrase subunit B [Staphylococcus hominis]
gi|393809341|gb|AFN25844.1| DNA gyrase subunit B [Staphylococcus hominis]
Length = 644
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 241/466 (51%), Positives = 320/466 (68%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 71 IENDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V + YHQ Y +G P L + S D+ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHLNETIYHQAYKKGVPQFDLK----EIGSTDKTGTVIRFKADSEIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
+ +++ T+ RIRELAFLN ++I LR E D E+ + Y + GG++ YV+ LN +
Sbjct: 185 SETTVYNYETLQKRIRELAFLNKGISITLRDEREDEEQREDT-YHYEGGIKSYVELLNEN 243
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ +HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KESIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTR 302
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G +SK +KD LSGE REGLT ++S++ NP+FEGQTKT+LGN EVR++VD+
Sbjct: 303 VLNSYGTQSKIIKDDKERLSGEDTREGLTAVVSIKHGNPQFEGQTKTKLGNSEVRQIVDR 362
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P+V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPNVARIIVEKGIMASRARVAAKKAREVTRRKSALEISSLPGKLADCS 422
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P+ESEIF+VEGDSAGGS K+GRD + Q I+ PL+ I A
Sbjct: 423 SKNPDESEIFLVEGDSAGGSTKEGRDSKTQAIL-PLRGKILNVEKA 467
>gi|448739095|ref|ZP_21721114.1| DNA gyrase subunit B [Halococcus thailandensis JCM 13552]
gi|445800612|gb|EMA50966.1| DNA gyrase subunit B [Halococcus thailandensis JCM 13552]
Length = 642
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 243/461 (52%), Positives = 319/461 (69%), Gaps = 21/461 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGL+AVRKRPAMYIGST RGLHHLVYE++DNA+DEA AGY +I V +
Sbjct: 6 YGAGQIQVLEGLQAVRKRPAMYIGSTDARGLHHLVYEVVDNAIDEALAGYCDSISVTVHD 65
Query: 137 DN--SVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
SVSV D+GRGIP+D H KSALE ++TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 66 GEHPSVSVTDDGRGIPVDEHE-DGKSALEVIMTVLHAGGKFDKES--YQVSGGLHGVGIS 122
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS+ +EVTV RDG + Q++ G+P L V + + GT+++FWPD+ VFT
Sbjct: 123 VVNALSKWVEVTVKRDGAVWEQRFDHGEPEGDLE-RVRDLREDESTGTKLQFWPDEAVFT 181
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTD 313
FD +T+A R+RELAFLN + I L D E++ E F + GG+ E+V +LN
Sbjct: 182 DTT-FDASTLANRLRELAFLNSGVEIEL-----DDERDGSRERFRYDGGIREFVVYLNET 235
Query: 314 KKPLHDVVGFRKDV----DG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
K LH+ V + D DG I++++ALQ +D ++ +AN+I T +GGTH+ G K
Sbjct: 236 KSALHEDVIYFDDAATVDDGEISVEIALQ-ATDELQGSIHAFANNINTREGGTHLTGFKT 294
Query: 369 SLTRTLNSLGKKSKTVKD-KDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
+LTR +N + +K D +L+G +REGLT +IS++ P+P+FEGQTKT+LGN EVR
Sbjct: 295 ALTRVVNDYASEHGLLKPLDDENLTGSDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVR 354
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
VV+ ++ E L Y E HPD ++++ K++ A KA AAK+A +L R+KS L S++LPGK
Sbjct: 355 GVVESAIHEQLDTYFEEHPDTAEAVIGKAVEAAKARRAAKKAEELTRRKSALESTALPGK 414
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPL 528
LADC S P ESE+FIVEGDSAGGSAKQGRDR FQ I+ PL
Sbjct: 415 LADCQSRDPTESELFIVEGDSAGGSAKQGRDREFQAIL-PL 454
>gi|78355050|ref|YP_386499.1| DNA gyrase subunit B [Desulfovibrio alaskensis G20]
gi|78217455|gb|ABB36804.1| DNA gyrase, B subunit [Desulfovibrio alaskensis G20]
Length = 797
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/459 (50%), Positives = 306/459 (66%), Gaps = 13/459 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
++Y + I VLEGL AVR RPAMYIGST RGLHHLVYE++DN++DEA AGY + V L
Sbjct: 8 QSYDAANITVLEGLSAVRMRPAMYIGSTDSRGLHHLVYEVVDNSIDEAMAGYCDKVTVKL 67
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DNSV+V DNGRGIP+D+HP + A+E V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 68 HLDNSVTVIDNGRGIPVDIHPKEGRPAVEVVMTVLHAGGKFDNDS--YKVSGGLHGVGVS 125
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VNALSE LEVTV RDG +YH ++ RG PV L V D +GT IRF PD+++F
Sbjct: 126 CVNALSEYLEVTVRRDGYKYHHRFERGVPVKELE----RVGETDLRGTTIRFRPDEEIFE 181
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
T QF + + R ELA+LNP L + E D + + GG+ E+V+ LN+ +
Sbjct: 182 TN-QFSFDILKKRFEELAYLNPGLEV----EFIDERTGDTASFHYEGGIREFVKNLNSGE 236
Query: 315 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+H ++ + D + +D ALQ+ + Y + ML +AN+IRT +GGTH+ G K +LTR +
Sbjct: 237 GGVHSIIFASGESDNVMVDFALQYNA-GYKENMLTFANNIRTKEGGTHLAGFKTALTRAI 295
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N+ + S K + LSG+ VREGLT ++SV++PNP+FEGQTKT+LGN EV +V V
Sbjct: 296 NNYIQNSDLPKKLKVKLSGDDVREGLTGVVSVKLPNPQFEGQTKTKLGNSEVAGIVSGLV 355
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E L Y +P I+ K++ A +A AA++A+DLVR+K L ++LPGKLADC S
Sbjct: 356 YENLNTYFGENPKDAKLIIEKAVDAARARDAARKAKDLVRRKGALSDNALPGKLADCQSK 415
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P ESE+FIVEGDSAGGSAKQGR+ Q I+ PL+ I
Sbjct: 416 DPSESELFIVEGDSAGGSAKQGRNPSTQAIL-PLRGKIL 453
>gi|357039045|ref|ZP_09100840.1| DNA gyrase, B subunit [Desulfotomaculum gibsoniae DSM 7213]
gi|355358509|gb|EHG06275.1| DNA gyrase, B subunit [Desulfotomaculum gibsoniae DSM 7213]
Length = 633
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 237/457 (51%), Positives = 312/457 (68%), Gaps = 13/457 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+E+IQVLEGLEAVR+RP MYIGST RGLHHLVYE++DN++DEA AGY I++ +
Sbjct: 8 YGAEEIQVLEGLEAVRRRPGMYIGSTSARGLHHLVYEVVDNSIDEAMAGYCDKIDIIIHH 67
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DN+V+V DNGRGIP+ +HP A+E VLT LHAGGKFGG S LHGVG+SVV
Sbjct: 68 DNTVTVVDNGRGIPVGIHPKMGLPAVEVVLTKLHAGGKFGGGGYKVSGG--LHGVGVSVV 125
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LEV V RDG YHQ++ RG VT+L + GT++ F PD ++F
Sbjct: 126 NALSEWLEVEVRRDGFIYHQRFERGVSVTSLKT----IGKAKNTGTKVTFKPDPEIFE-E 180
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
++F +T+ R+REL+FL + I E ++ Q Y +GG+ ++V +LN +K
Sbjct: 181 LEFSQDTLVQRLRELSFLTKGVKITFIDERTE----QQCVYQHSGGIRDFVLYLNKNKSV 236
Query: 317 LHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNS 376
H V F D I +++A Q+ +D + + + Y N+I TIDGGTH G + +LTR +N
Sbjct: 237 QHKPVYFEDTKDQIMVEVAFQY-TDGFVENLFSYVNNIHTIDGGTHETGFRTALTRVIND 295
Query: 377 LGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQE 436
GKK +K+ SL GE +REGLT IISV+VP P+FEGQTKT+LGN EVR +VD V +
Sbjct: 296 YGKKYNILKNGSSSLLGEDIREGLTSIISVKVPEPQFEGQTKTKLGNSEVRGIVDAVVSD 355
Query: 437 YLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTP 496
YL+ +LE +P V IL KS++A +A AA++AR+L R+K+ L SS+LPGKLADCS P
Sbjct: 356 YLSTFLEENPSVARKILEKSINASRAREAARKARELTRRKTALESSTLPGKLADCSERDP 415
Query: 497 EESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
SE+FIVEGDSAGGSAKQGRDRR+Q I+ PL+ I
Sbjct: 416 SLSELFIVEGDSAGGSAKQGRDRRYQAIL-PLRGKIL 451
>gi|317504159|ref|ZP_07962158.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella salivae
DSM 15606]
gi|315664735|gb|EFV04403.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella salivae
DSM 15606]
Length = 656
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/463 (49%), Positives = 308/463 (66%), Gaps = 15/463 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY +++E+ L
Sbjct: 11 YSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCTDVEITLNE 70
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV+V DNGRGIP+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S V
Sbjct: 71 DGSVTVEDNGRGIPVDEHKKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCV 128
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS + V+RDG Y Q+Y +GKP+ + V ++GTR +FWPD +FTT
Sbjct: 129 NALSTHMLSQVFRDGKIYQQEYEKGKPLYPVKV----VGETTKRGTRQQFWPDPTIFTTT 184
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKK 315
+ + +A R+RELA+LN + I L D E E F A GL+E+V++++ +
Sbjct: 185 T-YKWDIVASRMRELAYLNAGIRITLTDMRHDEEGKIRQEVFHAKDGLKEFVRYVDRHRT 243
Query: 316 PL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
L DV+ + + GI I++A+ + +D YS+ + Y N+I TI+GGTH+ G +A+LTRTL
Sbjct: 244 HLFDDVIYLKTEKQGIPIEVAIMYNTD-YSENIHSYVNNINTIEGGTHLTGFRAALTRTL 302
Query: 375 NSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
+ +K ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV V
Sbjct: 303 KAYADAEPTIAKQIEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAV 362
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
Q+V E L+ YLE HP I K + A A +AA++AR+ V++K+V+ LPGKLAD
Sbjct: 363 QQAVGEALSNYLEEHPIEAKKICEKVVLAATARIAARKARESVQRKNVMTGGGLPGKLAD 422
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
CS+ P+E EIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 423 CSNKDPKECEIFLVEGDSAGGSAKQGRDRYTQAIL-PLRGKIL 464
>gi|406594708|ref|YP_006741669.1| DNA gyrase subunit B [Chlamydia psittaci MN]
gi|410858472|ref|YP_006974412.1| DNA gyrase subunit B [Chlamydia psittaci 01DC12]
gi|405783140|gb|AFS21888.1| DNA gyrase, B subunit [Chlamydia psittaci MN]
gi|410811367|emb|CCO02013.1| DNA gyrase subunit B [Chlamydia psittaci 01DC12]
Length = 806
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/475 (48%), Positives = 310/475 (65%), Gaps = 22/475 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
K Y + I VLEGL+AVR+RP MYIG TG GLHHLVYE++DN++DEA AGY S I V +
Sbjct: 6 KNYDASAITVLEGLQAVRERPGMYIGDTGITGLHHLVYEVVDNSIDEAMAGYCSEIHVRI 65
Query: 135 LADNSVSVADNGRGIPIDLHPATNK------SALETVLTVLHAGGKFGGSSSGYSVSGGL 188
L D ++++DNGRGIPI H +K SALE VLTVLHAGGKF S Y VSGGL
Sbjct: 66 LEDGGITISDNGRGIPIQTHEKESKKQGRDVSALEVVLTVLHAGGKFDKDS--YKVSGGL 123
Query: 189 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 248
HGVG+S VNAL+E L TV++D Y ++SRG PVT L + + D+QGT I F+P
Sbjct: 124 HGVGVSCVNALAEKLVATVYKDKQAYQMEFSRGVPVTGLQL----LGATDKQGTEITFYP 179
Query: 249 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQ 308
D ++F++ + FD + + R+RELAFLN +TI ++D D ++ +F+ GG++ +V
Sbjct: 180 DNKIFSSCV-FDRSILIKRLRELAFLNRGITIIF-EDDRDVSFDKVI-FFYEGGIQSFVS 236
Query: 309 WLNTDKKPLHD----VVGFRKDVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
+LN +K+ L + G R DG I + ALQW S YS+ + YAN+I T GGTH+
Sbjct: 237 YLNQNKESLFPELIYISGSRTGDDGDIEFEAALQWNS-GYSELIYSYANNIPTRQGGTHL 295
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
G +LTR LN+ K K+ +SL+GE +REGLT ++SV+VPNP+FEGQTK +LGN
Sbjct: 296 TGFSTALTRVLNAYIKAHNLAKNDKLSLTGEDIREGLTAVVSVKVPNPQFEGQTKQKLGN 355
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
+V V Q E LT + + +P + I+ K A +A AAK+AR+L +KS L S+
Sbjct: 356 SDVGSVSQQITGEALTIFFDENPQIAKMIVEKVFIAAQAREAAKKARELTLRKSALDSAR 415
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKL DC P + E++IVEGDSAGGSAKQGRDRRFQ I+ P++ I A
Sbjct: 416 LPGKLIDCLEKDPAKCEMYIVEGDSAGGSAKQGRDRRFQAIL-PIRGKILNVEKA 469
>gi|329942857|ref|ZP_08291636.1| DNA gyrase, B subunit [Chlamydophila psittaci Cal10]
gi|332287450|ref|YP_004422351.1| DNA gyrase subunit B [Chlamydophila psittaci 6BC]
gi|384450604|ref|YP_005663204.1| DNA gyrase subunit B [Chlamydophila psittaci 6BC]
gi|384451604|ref|YP_005664202.1| DNA gyrase subunit B [Chlamydophila psittaci 01DC11]
gi|384452577|ref|YP_005665174.1| DNA gyrase subunit B [Chlamydophila psittaci 08DC60]
gi|384453553|ref|YP_005666149.1| DNA gyrase subunit B [Chlamydophila psittaci C19/98]
gi|384454532|ref|YP_005667127.1| DNA gyrase subunit B [Chlamydophila psittaci 02DC15]
gi|392376686|ref|YP_004064464.1| DNA gyrase subunit B [Chlamydophila psittaci RD1]
gi|407454046|ref|YP_006733154.1| DNA gyrase subunit B [Chlamydia psittaci 84/55]
gi|313848029|emb|CBY17027.1| DNA gyrase subunit B [Chlamydophila psittaci RD1]
gi|325506975|gb|ADZ18613.1| DNA gyrase subunit B [Chlamydophila psittaci 6BC]
gi|328815117|gb|EGF85106.1| DNA gyrase, B subunit [Chlamydophila psittaci Cal10]
gi|328914698|gb|AEB55531.1| DNA gyrase, B subunit [Chlamydophila psittaci 6BC]
gi|334692334|gb|AEG85553.1| DNA gyrase subunit B [Chlamydophila psittaci C19/98]
gi|334693314|gb|AEG86532.1| DNA gyrase subunit B [Chlamydophila psittaci 01DC11]
gi|334694289|gb|AEG87506.1| DNA gyrase subunit B [Chlamydophila psittaci 02DC15]
gi|334695266|gb|AEG88482.1| DNA gyrase subunit B [Chlamydophila psittaci 08DC60]
gi|405780805|gb|AFS19555.1| DNA gyrase, B subunit [Chlamydia psittaci 84/55]
Length = 806
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/475 (48%), Positives = 310/475 (65%), Gaps = 22/475 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
K Y + I VLEGL+AVR+RP MYIG TG GLHHLVYE++DN++DEA AGY S I V +
Sbjct: 6 KNYDASAITVLEGLQAVRERPGMYIGDTGITGLHHLVYEVVDNSIDEAMAGYCSEIHVRI 65
Query: 135 LADNSVSVADNGRGIPIDLHPATNK------SALETVLTVLHAGGKFGGSSSGYSVSGGL 188
L D ++++DNGRGIPI H +K SALE VLTVLHAGGKF S Y VSGGL
Sbjct: 66 LEDGGITISDNGRGIPIQTHEKESKKQGRDVSALEVVLTVLHAGGKFDKDS--YKVSGGL 123
Query: 189 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 248
HGVG+S VNAL+E L TV++D Y ++SRG PVT L + + D+QGT I F+P
Sbjct: 124 HGVGVSCVNALAEKLVATVYKDKQAYQMEFSRGVPVTGLQL----LGATDKQGTEITFYP 179
Query: 249 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQ 308
D ++F++ + FD + + R+RELAFLN +TI ++D D ++ +F+ GG++ +V
Sbjct: 180 DNEIFSSCV-FDRSILIKRLRELAFLNRGITIIF-EDDRDVSFDKVI-FFYEGGIQSFVS 236
Query: 309 WLNTDKKPLHD----VVGFRKDVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
+LN +K+ L + G R DG I + ALQW S YS+ + YAN+I T GGTH+
Sbjct: 237 YLNQNKESLFPEPIYISGSRTGDDGDIEFEAALQWNS-GYSELIYSYANNIPTRQGGTHL 295
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
G +LTR LN+ K K+ +SL+GE +REGLT ++SV+VPNP+FEGQTK +LGN
Sbjct: 296 TGFSTALTRVLNAYIKAHNLAKNDKLSLTGEDIREGLTAVVSVKVPNPQFEGQTKQKLGN 355
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
+V V Q E LT + + +P + I+ K A +A AAK+AR+L +KS L S+
Sbjct: 356 SDVGSVSQQITGEALTIFFDENPQIAKMIVEKVFIAAQAREAAKKARELTLRKSALDSAR 415
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKL DC P + E++IVEGDSAGGSAKQGRDRRFQ I+ P++ I A
Sbjct: 416 LPGKLIDCLEKDPAKCEMYIVEGDSAGGSAKQGRDRRFQAIL-PIRGKILNVEKA 469
>gi|340755275|ref|ZP_08691970.1| DNA gyrase, B subunit [Fusobacterium sp. D12]
gi|421500122|ref|ZP_15947137.1| DNA gyrase, B subunit [Fusobacterium necrophorum subsp.
funduliforme Fnf 1007]
gi|313685793|gb|EFS22628.1| DNA gyrase, B subunit [Fusobacterium sp. D12]
gi|402268886|gb|EJU18245.1| DNA gyrase, B subunit [Fusobacterium necrophorum subsp.
funduliforme Fnf 1007]
Length = 638
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/464 (48%), Positives = 309/464 (66%), Gaps = 9/464 (1%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
YG++ I VLEGLEAVRKRP MYIG+T RGLHHLV+E++DN+VDEA AGY + I V++L
Sbjct: 3 NYGAQNITVLEGLEAVRKRPGMYIGTTSARGLHHLVWEVVDNSVDEALAGYCNRITVSIL 62
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DN + V DNGRGIP+D+HP KSALE VLTVLHAGGKF + Y VSGGLHGVG+SV
Sbjct: 63 PDNIIQVEDNGRGIPVDIHPKYGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGISV 120
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALSE EV V R+G Y+QKY RGKP+ + + +++ + GT + F PD ++F T
Sbjct: 121 VNALSEWTEVKVKREGNVYYQKYLRGKPIEDVKI-ISALEAGETTGTIVTFKPDIEIFET 179
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
I F++ + R++ELA+LN L I L D E + + F GG+ ++++ + + +
Sbjct: 180 VI-FEYEVLQHRLKELAYLNRGLEINLL--DCRNEIGKKESFQFEGGISDFLKEVTQENQ 236
Query: 316 PL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
L + + + +D+A + + S+ + + N+I T +GG+H+ G + LT+ +
Sbjct: 237 TLLSKQIHIEGQAEQVGVDIAFTYTT-GQSEIIYSFVNNINTTEGGSHVTGFRTCLTKVI 295
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +GK +K+KD L G +REG+ IISV+VP P+FEGQTKT+LGN EV +V+ +
Sbjct: 296 NDIGKSQGFLKEKDGKLQGGDIREGIVAIISVKVPQPQFEGQTKTKLGNSEVSGIVNTVL 355
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
L +LE +P+ I+ K L++ KA AA+RAR+ V +KSVL SLPGKLADCSS
Sbjct: 356 STDLKIFLEDNPNDTKLIIEKILNSKKAREAAQRAREAVLRKSVLEVGSLPGKLADCSSK 415
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PEE EIF+VEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 416 KPEECEIFLVEGDSAGGSAKQGRDRYFQAIL-PLKGKILNVEKA 458
>gi|336112685|ref|YP_004567452.1| DNA gyrase subunit B [Bacillus coagulans 2-6]
gi|335366115|gb|AEH52066.1| DNA gyrase, B subunit [Bacillus coagulans 2-6]
Length = 641
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/472 (49%), Positives = 320/472 (67%), Gaps = 13/472 (2%)
Query: 69 KENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
+E ++YG+EQIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AG+
Sbjct: 3 QEQLQKQSYGAEQIQVLEGLEAVRKRPGMYIGSTSARGLHHLVWEIVDNSIDEALAGFCD 62
Query: 129 NIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 188
I V + DNS++V DNGRGIP+ + + A+E ++T+LHAGGKFGG S L
Sbjct: 63 EINVFIEKDNSITVKDNGRGIPVGIQEKVGRPAVEVIMTILHAGGKFGGGGYKVSGG--L 120
Query: 189 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 248
HGVG SVVNALS L+V V RDG YHQKY RGKP L + DR GT F P
Sbjct: 121 HGVGASVVNALSTELDVYVHRDGHIYHQKYRRGKPAFDLKI----IGETDRTGTTTHFKP 176
Query: 249 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR-KEDSDPEKNQYNEYFFAGGLEEYV 307
D ++FT I+FD++ + R+RELAFLN + I + K + +P K Y+ + GG++ YV
Sbjct: 177 DPEIFTETIEFDYDILTTRLRELAFLNKGIKITIEDKREKNPRKQVYH---YEGGIKSYV 233
Query: 308 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 366
+ LN K+ LH + + + DGIT++++LQ+ +D ++ + +AN+I T +GGTH G
Sbjct: 234 EHLNRSKEVLHKEPIYVEGEKDGITVEVSLQY-NDGFTSNIYSFANNIHTYEGGTHESGF 292
Query: 367 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 426
K +LTR +N +K+ +K+ + +L+GE VREGLT I+S++ P+P+FEGQTKT+LGN E
Sbjct: 293 KTALTRVINDYARKNNLIKENEANLTGEDVREGLTAIVSIKHPDPQFEGQTKTKLGNTEA 352
Query: 427 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 486
R + D E +++ +P V I+ K L A +A +AAK+AR+L R+KS L S+SLPG
Sbjct: 353 RTITDAVFSETFEKFMMENPQVARKIVEKGLMAARARMAAKKARELTRRKSALESTSLPG 412
Query: 487 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
KLADC+S P ESE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 413 KLADCTSRDPSESELYIVEGDSAGGSAKQGRDRMFQAIL-PLRGKILNVEKA 463
>gi|384442357|ref|YP_005658609.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni S3]
gi|48094245|gb|AAT40430.1| DNA gyrase subunit B [Campylobacter jejuni]
gi|315057444|gb|ADT71773.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni S3]
Length = 769
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/466 (46%), Positives = 309/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I+V
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD Q+
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGV----IGKSKKTGTTIEFWPDDQI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LN K+TI + D ++ + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYEILAKRFRELAYLNSKITINFK----DNRVGKHESFHFEGGISQFVIDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKAIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++GE VREGL ++SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDNKITGEDVREGLIAVVSVKVPEPQFEGQTKGKLGSTYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYLT+Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|448730194|ref|ZP_21712504.1| DNA gyrase subunit B [Halococcus saccharolyticus DSM 5350]
gi|445793925|gb|EMA44490.1| DNA gyrase subunit B [Halococcus saccharolyticus DSM 5350]
Length = 642
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 240/461 (52%), Positives = 319/461 (69%), Gaps = 21/461 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGL+AVRKRPAMYIGST RGLHHLVYE++DNA+DEA AG+ +IEV +
Sbjct: 6 YGAGQIQVLEGLQAVRKRPAMYIGSTDARGLHHLVYEVVDNAIDEALAGHCDSIEVTIHD 65
Query: 137 DN--SVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
D SVSV D+GRGIP+D H KSALE ++TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 66 DENPSVSVTDDGRGIPVDEHE-DGKSALEVIMTVLHAGGKFDKES--YQVSGGLHGVGVS 122
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS+ +EVTV RDG + Q++ G P + V + + GT ++FWPD +F+
Sbjct: 123 VVNALSKWVEVTVKRDGAVWEQRFDHGAPEGEIE-RVRDLHEDEETGTELQFWPDDAIFS 181
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTD 313
T FD +T+A R+RELAFLN + I L E +++ E F + GG+ E+V +LN
Sbjct: 182 TTT-FDASTLANRLRELAFLNSGVEIELHDE-----RDESRERFRYDGGIREFVVYLNES 235
Query: 314 KKPLHDVVGFRKDV----DG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
K LH+ V + +D DG + +++A+Q +D ++ +AN+I T +GGTH+ G K
Sbjct: 236 KSALHEDVIYFEDAATVEDGEVAVEVAMQ-TTDELQGSIHAFANNINTREGGTHLTGFKT 294
Query: 369 SLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
+LTR +N + +K D +L G +REGLT +ISV+ P+P+FEGQTKT+LGN EVR
Sbjct: 295 ALTRVVNDYAGDNGLLKPLDGENLKGSDIREGLTAVISVKHPDPQFEGQTKTKLGNGEVR 354
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
+V+ +V E+L Y E HPD + +SK++ A KA AAK+A +L R+KS L S++LPGK
Sbjct: 355 GIVESAVHEHLDTYFEEHPDTAKAAISKAVEAAKARRAAKKAEELTRRKSALESTALPGK 414
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPL 528
LADC + PEE+E+FIVEGDSAGGSAKQGRDR FQ I+ PL
Sbjct: 415 LADCQTRDPEEAELFIVEGDSAGGSAKQGRDREFQAIL-PL 454
>gi|449071159|ref|YP_007438239.1| DNA gyrase subunit B [Chlamydophila psittaci Mat116]
gi|449039667|gb|AGE75091.1| DNA gyrase subunit B [Chlamydophila psittaci Mat116]
Length = 806
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/475 (48%), Positives = 310/475 (65%), Gaps = 22/475 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
K Y + I VLEGL+AVR+RP MYIG TG GLHHLVYE++DN++DEA AGY S I V +
Sbjct: 6 KNYDASAITVLEGLQAVRERPGMYIGDTGITGLHHLVYEVVDNSIDEAMAGYCSEIHVRI 65
Query: 135 LADNSVSVADNGRGIPIDLHPATNK------SALETVLTVLHAGGKFGGSSSGYSVSGGL 188
L D ++++DNGRGIPI H +K SALE VLTVLHAGGKF S Y VSGGL
Sbjct: 66 LEDGGITISDNGRGIPIQTHEKESKKQGRDVSALEVVLTVLHAGGKFDKDS--YKVSGGL 123
Query: 189 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 248
HGVG+S VNAL+E L TV++D Y ++SRG PVT L + + D+QGT I F+P
Sbjct: 124 HGVGVSCVNALAEKLVATVYKDKQAYQMEFSRGVPVTGLQL----LGATDKQGTEITFYP 179
Query: 249 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQ 308
D ++F++ + FD + + R+RELAFLN +TI ++D D ++ +F+ GG++ +V
Sbjct: 180 DNKIFSSCV-FDRSILIKRLRELAFLNRGITIIF-EDDRDVSFDKVI-FFYEGGIQSFVS 236
Query: 309 WLNTDKKPLHD----VVGFRKDVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
+LN +K+ L + G R DG I + ALQW S YS+ + YAN+I T GGTH+
Sbjct: 237 YLNQNKESLFPEPIYISGSRTGDDGDIEFEAALQWNS-GYSELIYSYANNIPTRQGGTHL 295
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
G +LTR LN+ K K+ +SL+GE +REGLT ++SV+VPNP+FEGQTK +LGN
Sbjct: 296 TGFSTALTRVLNAYIKAHNLAKNDKLSLTGEDIREGLTAVVSVKVPNPQFEGQTKQKLGN 355
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
+V V Q E LT + + +P + I+ K A +A AAK+AR+L +KS L S+
Sbjct: 356 SDVGSVSQQITGEALTIFFDENPQIAKMIVEKVFIAAQAREAAKKARELTLRKSALDSAR 415
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKL DC P + E++IVEGDSAGGSAKQGRDRRFQ I+ P++ I A
Sbjct: 416 LPGKLIDCLEKDPAKCEMYIVEGDSAGGSAKQGRDRRFQAIL-PIRGKILNVEKA 469
>gi|399927980|ref|ZP_10785338.1| DNA gyrase subunit B [Myroides injenensis M09-0166]
Length = 646
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/469 (48%), Positives = 311/469 (66%), Gaps = 19/469 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ IQ LEG+E VR RP+MYIG G RGLHHLVYE++DN++DEA AGY I V +
Sbjct: 10 YSADSIQALEGMEHVRMRPSMYIGDVGVRGLHHLVYEVVDNSIDEALAGYCDTINVIINE 69
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNSV+V DNGRGIP+D+H SALE V+T + AGGKF S Y VSGGLHGVG+S V
Sbjct: 70 DNSVTVQDNGRGIPVDIHKKEGVSALEVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCV 127
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS+ L+ TV+RDG Y Q+YS+GK + + V D++GT++ F PD +FT
Sbjct: 128 NALSDLLKATVFRDGKIYEQEYSQGKALYPVKV----VGETDKKGTQVTFHPDPTIFTQV 183
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALR-----KEDSDPEKNQYNEYFFA-GGLEEYVQWL 310
+F + T+AGR+RELAFLN LTI L ED P+ +E FF+ GL+E++++L
Sbjct: 184 TEFSYETLAGRLRELAFLNKGLTITLTDLREINEDGTPK----SEVFFSKDGLKEFIKFL 239
Query: 311 NTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
+ ++ P+ DV+ D + +++AL + +D YS+ + Y N+I T +GGTH++G +
Sbjct: 240 DGNRVPIIGDVISMETDKGEVPVEVALIY-NDTYSENIYSYVNNINTHEGGTHLQGFRMG 298
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
LTRTL S ++ ++G+ REGLT IISV+V P+FEGQTKT+LGN EV
Sbjct: 299 LTRTLKKYADASGLLEKLKFEITGDDFREGLTAIISVKVMEPQFEGQTKTKLGNREVVSP 358
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
V Q+V E L YLE HP+ I+ K + A +A AAK+AR++V++K+V+ LPGKL+
Sbjct: 359 VSQAVAEMLEAYLEEHPNDAKIIVQKVILAAQARHAAKKAREMVQRKTVMVGGGLPGKLS 418
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
DCS P+ E+F+VEGDSAGG+AK+GRDR FQ I+ PL+ I A
Sbjct: 419 DCSEQDPKLCEVFLVEGDSAGGTAKEGRDRNFQAIL-PLRGKILNVEKA 466
>gi|373494049|ref|ZP_09584655.1| DNA gyrase subunit B [Eubacterium infirmum F0142]
gi|371969183|gb|EHO86634.1| DNA gyrase subunit B [Eubacterium infirmum F0142]
Length = 641
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 237/471 (50%), Positives = 324/471 (68%), Gaps = 13/471 (2%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E V+ Y + QIQVLEGLEAVRKRP MYIGSTG RGLHHLVYE++DN+VDEA AGY +
Sbjct: 4 EEKVNTQYDAAQIQVLEGLEAVRKRPGMYIGSTGARGLHHLVYEVVDNSVDEALAGYCKH 63
Query: 130 IEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 189
I++ + D S++V D+GRG+P+D HP A+E + TVLHAGGKFGG S LH
Sbjct: 64 IKIIINKDGSLTVEDDGRGMPVDNHPKLGIPAVEVIHTVLHAGGKFGGGGYKVSGG--LH 121
Query: 190 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 249
GVG SVVNALS + V + R+G Y Q+Y RGK VT L + G++ FWPD
Sbjct: 122 GVGASVVNALSTDMVVEIKRNGKIYRQEYKRGKTVTPLEV----IGESKSTGSKTTFWPD 177
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 309
++F T I+FD++T+ R RE+AFLN + I++ E P+K + + + GGL+EYV +
Sbjct: 178 AEIFET-IEFDYDTLQHRFREMAFLNKGIKISITDERDTPKKKEV--FHYEGGLKEYVHY 234
Query: 310 LNTDKKPLH-DVVGFR-KDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
+N +K+ LH +V+ F ++ + + +++ALQ+ +D Y++ +L YAN+I T DGGTH+ G+K
Sbjct: 235 INQNKEVLHKEVIYFEVENKNSMEVEVALQY-TDRYNEFILSYANNINTTDGGTHMAGLK 293
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
++LTR +N KKSK +KD D +LSGE +REG+T I+SV++ P+FEGQTK +LGN EVR
Sbjct: 294 SALTRAINDYAKKSKILKDSDPALSGEDIREGITAIVSVKLAQPQFEGQTKAKLGNSEVR 353
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
V+ + + LT YLE HP I+ K + A +A AA++ARD+ R+K+ L S+SLPGK
Sbjct: 354 GFVETATNDNLTAYLEEHPQEAKIIIEKCIRASRAREAARKARDITRRKNALDSTSLPGK 413
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LADCS P SEIF+VEGDSAGGSAKQGRDR Q ++ PL+ I A
Sbjct: 414 LADCSEKDPALSEIFLVEGDSAGGSAKQGRDRSRQAVL-PLRGKILNVEKA 463
>gi|303235765|ref|ZP_07322372.1| DNA gyrase, B subunit [Prevotella disiens FB035-09AN]
gi|302484212|gb|EFL47200.1| DNA gyrase, B subunit [Prevotella disiens FB035-09AN]
Length = 683
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/464 (48%), Positives = 310/464 (66%), Gaps = 15/464 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY S+IEV +
Sbjct: 37 NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCSHIEVTIN 96
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V D+GRGIP+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 97 EDNSITVEDDGRGIPVDEHEKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 154
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS + V+R+G Y Q+Y +GKP+ ++ V D+ GTR +FWPD +FTT
Sbjct: 155 VNALSSHMMSQVFRNGKIYQQEYEKGKPLYSVKI----VGDTDKTGTRQQFWPDASIFTT 210
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG-GLEEYVQWLNTDK 314
I + + +A R+RELAFLN + I L + E E F A GL+E+V++++ +
Sbjct: 211 TI-YQWDIVARRMRELAFLNAGIKITLTDLRPNEEGKTKQEVFHAQEGLKEFVRYVDRHR 269
Query: 315 KPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
L DV+ + + GI I++A+ + +D Y++ + Y N+I TI+GGTH+ G + +LTRT
Sbjct: 270 THLFDDVIYLKTEKQGIPIEVAIMYNND-YNENIHSYVNNINTIEGGTHLTGFRTALTRT 328
Query: 374 LNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
L + +K ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 329 LKAYADNDTQIAKQIEKAKIEITGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGA 388
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
V Q+V E L+ YLE +P I K + A A +AA++AR+ V++K+V+ LPGKLA
Sbjct: 389 VQQAVGEALSYYLEENPAEAKLICDKVILAATARIAARKARESVQRKNVMTGGGLPGKLA 448
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
DCS+ P+E EIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 449 DCSNKDPKECEIFLVEGDSAGGSAKQGRDRYTQAIL-PLRGKIL 491
>gi|442803502|ref|YP_007371651.1| DNA gyrase subunit B [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442739352|gb|AGC67041.1| DNA gyrase subunit B [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 643
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/456 (50%), Positives = 307/456 (67%), Gaps = 12/456 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
K Y EQIQVLEG+EAVRKRP MYIGST RGLHHLVYEILDN++DEA AG+ I+V
Sbjct: 8 DKKYDEEQIQVLEGIEAVRKRPGMYIGSTSVRGLHHLVYEILDNSIDEALAGFCDKIKVI 67
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNSV+ DNGRGIP+ +HP LE V T LH+GGKFGGS GY VSGGLHGVG
Sbjct: 68 IHKDNSVTNIDNGRGIPVGIHPKMGIPTLEVVHTTLHSGGKFGGS--GYKVSGGLHGVGA 125
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
+VVNALSE + V V RDG Y Q+Y RGK VT + V D GT F PD ++F
Sbjct: 126 AVVNALSEWMVVEVMRDGKRYRQRYERGKAVTGIEI----VGEADSTGTITTFKPDPEIF 181
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
++FD+ + R RE+AFLN LTI E D K N + GG+ +V+++N +
Sbjct: 182 E-VVEFDYEMLLKRFREIAFLNKGLTIQFIDERGDEVKE--NILHYEGGIISFVKYINQN 238
Query: 314 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K +HD ++ + + I++A Q+ +D++++ + YAN+I T +GGTH+ G KA++T+
Sbjct: 239 KDVIHDDIIYLEGQKENMEIEIAFQY-TDSFNENIFSYANNIPTTEGGTHVTGFKAAITK 297
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N +K +KD D +LSGE VREG+T II++++ +P+FEGQTKT+LGN +VR+ V+
Sbjct: 298 VINDYARKINMLKDNDKNLSGEDVREGITAIINMKLTDPQFEGQTKTKLGNADVRQFVEN 357
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
V E L LE +P I+ KSL++ +A AA++AR+L ++KS + + SLPGKLADC
Sbjct: 358 LVTEKLQYILEENPKTARIIVEKSLASYRAREAARKARELTKRKSAMENFSLPGKLADCQ 417
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPL 528
P E+FIVEGDSAGGSAK GRDRR+Q I+ PL
Sbjct: 418 EKDPRLCELFIVEGDSAGGSAKMGRDRRYQAIL-PL 452
>gi|406592370|ref|YP_006739550.1| DNA gyrase subunit B [Chlamydia psittaci CP3]
gi|405788242|gb|AFS26985.1| DNA gyrase, B subunit [Chlamydia psittaci CP3]
Length = 806
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/475 (48%), Positives = 310/475 (65%), Gaps = 22/475 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
K Y + I VLEGL+AVR+RP MYIG TG GLHHLVYE++DN++DEA AGY S I V +
Sbjct: 6 KNYDASAITVLEGLQAVRERPGMYIGDTGITGLHHLVYEVVDNSIDEAMAGYCSEIHVRI 65
Query: 135 LADNSVSVADNGRGIPIDLHPATNK------SALETVLTVLHAGGKFGGSSSGYSVSGGL 188
L D ++++DNGRGIPI H +K SALE VLTVLHAGGKF S Y VSGGL
Sbjct: 66 LEDGGITISDNGRGIPIQTHEKESKKQGRDVSALEVVLTVLHAGGKFDKDS--YKVSGGL 123
Query: 189 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 248
HGVG+S VNAL+E L TV++D Y ++SRG PVT L + + D+QGT I F+P
Sbjct: 124 HGVGVSCVNALAEKLVATVYKDKQAYQMEFSRGVPVTGLQL----LGATDKQGTEITFYP 179
Query: 249 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQ 308
D ++F++ + FD + + R+RELAFLN +TI ++D D ++ +F+ GG++ +V
Sbjct: 180 DNKIFSSCV-FDRSILIKRLRELAFLNRGITIIF-EDDRDVSFDKVI-FFYEGGIQSFVS 236
Query: 309 WLNTDKKPLHD----VVGFRKDVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
+LN +K+ L + G R DG I + ALQW S YS+ + YAN+I T GGTH+
Sbjct: 237 YLNQNKESLFPEPIYISGSRTGDDGDIEFEAALQWNS-GYSELIYSYANNIPTRQGGTHL 295
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
G +LTR LN+ K K+ +SL+GE +REGLT ++SV+VPNP+FEGQTK +LGN
Sbjct: 296 TGFSTALTRVLNAYIKAHNLAKNDKLSLTGEDIREGLTAVVSVKVPNPQFEGQTKQKLGN 355
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
+V V Q E LT + + +P + I+ K A +A AAK+AR+L +KS L S+
Sbjct: 356 SDVGSVSQQITGEALTIFFDENPQIAKMIVEKVFIAAQAREAAKKARELTLRKSALDSAR 415
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKL DC P + E++IVEGDSAGGSAKQGRDRRFQ I+ P++ I A
Sbjct: 416 LPGKLIDCLEKDPAKCEMYIVEGDSAGGSAKQGRDRRFQAIL-PIRGKILNVEKA 469
>gi|150003955|ref|YP_001298699.1| DNA gyrase B subunit [Bacteroides vulgatus ATCC 8482]
gi|294775119|ref|ZP_06740648.1| DNA gyrase, B subunit [Bacteroides vulgatus PC510]
gi|319639808|ref|ZP_07994538.1| B subunit [Bacteroides sp. 3_1_40A]
gi|345518957|ref|ZP_08798390.1| DNA gyrase, B subunit [Bacteroides sp. 4_3_47FAA]
gi|423312902|ref|ZP_17290838.1| DNA gyrase, B subunit [Bacteroides vulgatus CL09T03C04]
gi|149932379|gb|ABR39077.1| DNA gyrase B subunit [Bacteroides vulgatus ATCC 8482]
gi|254833591|gb|EET13900.1| DNA gyrase, B subunit [Bacteroides sp. 4_3_47FAA]
gi|294451163|gb|EFG19634.1| DNA gyrase, B subunit [Bacteroides vulgatus PC510]
gi|317388625|gb|EFV69474.1| B subunit [Bacteroides sp. 3_1_40A]
gi|392686933|gb|EIY80232.1| DNA gyrase, B subunit [Bacteroides vulgatus CL09T03C04]
Length = 654
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/467 (48%), Positives = 305/467 (65%), Gaps = 14/467 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHLVYE++DN++DEA AGY +IEV +
Sbjct: 12 NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLVYEVVDNSIDEALAGYCDHIEVTIN 71
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+D H KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 72 EDNSITVQDNGRGIPVDFHEKEKKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 129
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT- 254
VNALS + V+R G Y Q+YS G P+ + V V + D GT+ FWPD +FT
Sbjct: 130 VNALSTHMTTQVFRGGKIYQQEYSCGHPLYS----VKEVGTADITGTKQTFWPDDTIFTV 185
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNT 312
T +FD + R+RELA+LN +TI+L E + + F G++E+V++LN
Sbjct: 186 TEYKFD--ILQARMRELAYLNKGITISLTDRRIKEEDGSFKKEIFHSDEGVKEFVRFLNR 243
Query: 313 DKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+ + L +DV+ + + I+ A+ + + Y +++ Y N+I TI+GGTH G +++LT
Sbjct: 244 NNEALINDVIYLNTEKNNTPIECAIMYNT-GYRESLHSYVNNINTIEGGTHEAGFRSALT 302
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R L + +K ++ + +SGE REGL +ISV+V P+FEGQTKT+LGN EV V+
Sbjct: 303 RVLKKYAEDTKALEKAKVEISGEDFREGLIAVISVKVAEPQFEGQTKTKLGNSEVSGAVN 362
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
Q+V E LT YLE HP I+ K + A A +AA++AR+ V++KS + LPGKLADC
Sbjct: 363 QAVGEALTYYLEEHPKEAKQIVDKVILAATARIAARKARESVQRKSPMGGGGLPGKLADC 422
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SS PEE E+F+VEGDSAGGSAKQGR R FQ I+ PL+ I A
Sbjct: 423 SSRNPEECELFLVEGDSAGGSAKQGRSRAFQAIL-PLRGKILNVEKA 468
>gi|167036441|ref|YP_001664019.1| DNA gyrase subunit B [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|256751447|ref|ZP_05492325.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter ethanolicus
CCSD1]
gi|320114866|ref|YP_004185025.1| DNA topoisomerase IV subunit B [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166855275|gb|ABY93683.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|256749666|gb|EEU62692.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter ethanolicus
CCSD1]
gi|319927957|gb|ADV78642.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 633
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/466 (50%), Positives = 322/466 (69%), Gaps = 16/466 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+TY + QIQ+LEGLEAVRKRP MYIGSTG RGLHHLVYE++DN++DEA AGY NI V +
Sbjct: 5 ETYTASQIQILEGLEAVRKRPGMYIGSTGSRGLHHLVYEVVDNSIDEALAGYCKNIVVTI 64
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DNS++V D+GRGIP D+HP K A+E LT+LHAGGKF ++ Y VSGGLHGVG+S
Sbjct: 65 HKDNSITVEDDGRGIPTDIHPKVRKPAVEVALTMLHAGGKF--NNDAYKVSGGLHGVGVS 122
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALSE LEV V + G Y Q+Y RG P T L + GT I F PDK++F
Sbjct: 123 VVNALSEKLEVIVKQHGKIYRQRYERGVPKTDLEVIG----ETEETGTTITFKPDKEIFE 178
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
+ FD++ +A R+RELAFLN + I L E D ++ +N + GG+ +V++LN +K
Sbjct: 179 ETV-FDYDVLAQRLRELAFLNKGINIKLIDE-RDGKEEVFN---YEGGIISFVKYLNRNK 233
Query: 315 KPLHD--VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
+ LH+ + K+ D +++ +Q+ +D+Y++ + +AN+I T +GGTH+ G KA+LT+
Sbjct: 234 EVLHEEPIYMEAKNSD-YEVEVCMQY-NDSYTENIFSFANNIDTREGGTHLVGFKAALTK 291
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N +K +KD + +L GE VREGLT I+SV++ NP+FEGQTKT+LGN E+R +V+
Sbjct: 292 VINDYARKYGIIKDNEKNLQGEDVREGLTAIVSVKLKNPQFEGQTKTKLGNSEMRSIVEN 351
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
V E L+ +LE +P V I+ K+ A +A AA++AR+L R+KS L +++LPGKLADCS
Sbjct: 352 VVTEKLSAFLEENPSVAKVIVEKATQAARAREAARKARELTRRKSALENTTLPGKLADCS 411
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P + E+F+VEGDSAGGSAK GR+ RFQ I+ PL+ I A
Sbjct: 412 EKDPSKCELFLVEGDSAGGSAKSGRNSRFQAIL-PLRGKILNVEKA 456
>gi|354616076|ref|ZP_09033764.1| DNA gyrase, B subunit [Saccharomonospora paurometabolica YIM 90007]
gi|353219572|gb|EHB84123.1| DNA gyrase, B subunit [Saccharomonospora paurometabolica YIM 90007]
Length = 654
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/473 (48%), Positives = 316/473 (66%), Gaps = 21/473 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + I VLEGLEAVRKRP MYIGSTG RGLHHL++E++DN+VDEA AG+AS +EV LLA
Sbjct: 8 YSASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEAMAGHASQVEVTLLA 67
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D V V D+GRGIP++ HP + LE VLT LHAGGKF S Y+VSGGLHGVG+SVV
Sbjct: 68 DGGVRVVDDGRGIPVEEHPVHGQPTLEIVLTQLHAGGKF--DSESYAVSGGLHGVGVSVV 125
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS +L+V V R G + Q Y + P +L +R GT + F+ D ++F T
Sbjct: 126 NALSSTLDVEVHRGGTMWVQHYEKSVP-----GELLDKGPTERTGTSLTFFADPEIFETT 180
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKE------DSDPEKNQYN----EYFFAGGLEEY 306
F T+A R++E+AFLN LTI LR E D D Q Y + GGLE++
Sbjct: 181 -HFSAETVARRLQEMAFLNKGLTIVLRDERVSGDEDEDAAGQQAEVKERTYHYPGGLEDF 239
Query: 307 VQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 365
V+ +N + +H VV F + +G+ +++A+QW ++ ++ ++ +AN+I T +GGTH EG
Sbjct: 240 VRHINASRDAIHPTVVSFEEQGEGVEVEVAMQW-NNGFTPSVYTFANTINTHEGGTHEEG 298
Query: 366 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 425
+A+LTR +N+ + + +K+KD +L+G+ VREGL IISV+V P+FEGQTKT+LGN E
Sbjct: 299 FRAALTRVVNAYARDKRLLKEKDANLTGDDVREGLAAIISVKVAEPQFEGQTKTKLGNSE 358
Query: 426 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 485
VR V + E+L ++ E +P I++K++S+ +A LAA++ARDLVR+K + LP
Sbjct: 359 VRSFVQTTCNEWLADWFERNPAEAKVIINKAVSSAQARLAARKARDLVRRKGAMDIGGLP 418
Query: 486 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
GKL DC ST PE+ E++IVEGDSAGGSAK+GRD +Q I+ P++ I A
Sbjct: 419 GKLKDCRSTDPEKCELYIVEGDSAGGSAKEGRDSHYQAIL-PIRGKIINVEKA 470
>gi|302864517|ref|YP_003833154.1| DNA gyrase subunit B [Micromonospora aurantiaca ATCC 27029]
gi|315500827|ref|YP_004079714.1| DNA gyrase subunit B [Micromonospora sp. L5]
gi|302567376|gb|ADL43578.1| DNA gyrase, B subunit [Micromonospora aurantiaca ATCC 27029]
gi|315407446|gb|ADU05563.1| DNA gyrase, B subunit [Micromonospora sp. L5]
Length = 648
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 234/469 (49%), Positives = 316/469 (67%), Gaps = 15/469 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K YG+E I VLEGLEAVRKRP MYIGSTG RGLHHLV+E++DNAVDEA AG+ I+V
Sbjct: 6 NKKYGAESITVLEGLEAVRKRPGMYIGSTGERGLHHLVWEVVDNAVDEALAGHCDTIDVV 65
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
LLAD V V DNGRG P+DLHP K +E LTVLHAGGKF G + Y+VSGGLHGVG+
Sbjct: 66 LLADGGVRVTDNGRGFPVDLHPKLKKPGVEVALTVLHAGGKFDGKA--YAVSGGLHGVGV 123
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS + V + +DG + Q+Y KP ++ DR G+ + FWPD VF
Sbjct: 124 SVVNALSTRMAVEIHKDGFVWRQQYHHSKPTPLEKG-----EATDRTGSAVSFWPDPDVF 178
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKE---DSDPEKNQYNEYFFAGGLEEYVQWL 310
T + FD +TI R++E+AFL LTI L E + + K + + + GG+ ++V+ L
Sbjct: 179 ET-VDFDFHTIYRRLQEMAFLTRGLTIHLLDERVPEDEDGKTREVTFHYEGGIADFVRHL 237
Query: 311 NTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
N K P+H VV F + G+++++A+QW +++Y +++ +AN+I T +GGTH EG +A+
Sbjct: 238 NASKSPIHKTVVEFGAEETGMSVEIAMQW-NESYGESVYTFANNINTHEGGTHEEGFRAA 296
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
LT +N G + K +K D LSGE +REGL IISV++ +P+FEGQTKT+LGN V+
Sbjct: 297 LTSVVNRYGAEKKLLK-GDERLSGEDIREGLAAIISVKLTDPQFEGQTKTKLGNTPVKGF 355
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
V + E L ++ + +P I+ K+ A +A +AA++AR L R+KS+L S S+PGKLA
Sbjct: 356 VQRVCNESLVDWFDRNPAEAKIIIQKASQAARARIAAQQARKLARRKSLLESGSMPGKLA 415
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
DC ST P ESE+FIVEGDSAGGSAKQGRD R Q I+ P++ I A
Sbjct: 416 DCQSTDPRESEVFIVEGDSAGGSAKQGRDPRTQAIL-PIRGKILNVEKA 463
>gi|302391744|ref|YP_003827564.1| DNA gyrase subunit B [Acetohalobium arabaticum DSM 5501]
gi|302203821|gb|ADL12499.1| DNA gyrase subunit B [Acetohalobium arabaticum DSM 5501]
Length = 637
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/463 (48%), Positives = 319/463 (68%), Gaps = 12/463 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +EQIQVLEGLEAVRKRP MYIGSTG +GLHHLV+E +DN++DE AG+ I+V +
Sbjct: 9 YNAEQIQVLEGLEAVRKRPGMYIGSTGTKGLHHLVWEAVDNSIDEFLAGHGEEIKVKIKE 68
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
+ +SV D GRGIP+++HP A + VLT LHAGGKF SSGY VSGGLHGVG+SVV
Sbjct: 69 GSIISVEDQGRGIPVEVHPDKKLPAAQLVLTTLHAGGKF--DSSGYKVSGGLHGVGISVV 126
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LE+T+WR+G Y Q+Y +G PVT +S + GT+I F PD+ +F
Sbjct: 127 NALSEWLELTIWRNGYTYTQQYEKGVPVTEFE----KSNSTTKTGTKIEFKPDEDIFDN- 181
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+++ + +A R++E AFLN L I+L D+ P + Y + GGLE ++ +LN D+
Sbjct: 182 VKYKFDVLANRLQESAFLNKGLKISLV--DTRPGLEKEVTYQYDGGLEAFIDYLNQDRDL 239
Query: 317 LHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LHD +V ++VD +++A Q+ + ++++ + +AN+I T DGG H+ G K +LTR N
Sbjct: 240 LHDDIVYLEEEVDDTYVEVAFQY-NKSFNERIYSFANNINTHDGGYHLTGFKTALTRAFN 298
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+ K + +K D L+G +REGLT +++V++ P+FEGQTK +LGN E+R VV+ +V
Sbjct: 299 NYAKDNNLLKKSDPKLTGRDLREGLTAVVNVKLTEPQFEGQTKAKLGNSEIRSVVEGAVY 358
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
YL +YL H D+ +++K+L A+KA AAK+A++L ++K VL ++SLPGKL+DCSS
Sbjct: 359 NYLNQYLPRHHDMAKEVINKALEAVKARKAAKKAKELTKRKGVLNNNSLPGKLSDCSSRK 418
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
EESE+++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 419 SEESELYLVEGDSAGGSAKQGRNRDFQAIL-PLKGKILNVERA 460
>gi|282163382|ref|YP_003355767.1| DNA gyrase subunit B [Methanocella paludicola SANAE]
gi|282155696|dbj|BAI60784.1| DNA gyrase subunit B [Methanocella paludicola SANAE]
Length = 635
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/466 (48%), Positives = 318/466 (68%), Gaps = 15/466 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + IQVLEGLEAVRKRP+MYIGST RGLHHLVYE++DN++DEA AGY NIEV
Sbjct: 7 AQAYDASSIQVLEGLEAVRKRPSMYIGSTDYRGLHHLVYEVVDNSIDEALAGYCHNIEVT 66
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ D SV+V+D+GRGIP+++H + ALE V+T+LHAGGKF + Y VSGGLHGVG+
Sbjct: 67 INKDGSVTVSDDGRGIPVEMHEKYKRPALEIVMTMLHAGGKFDNLT--YKVSGGLHGVGV 124
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE L V V R+ + Q+Y RGKP V + + GT F PD +F
Sbjct: 125 SVVNALSEWLRVEVRRNEKLWVQEYVRGKP----KDEVHEIGTAIGTGTTTIFKPDPTIF 180
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +F + + R+RELAFLN + I L D + + + GG+ ++VQ+LN
Sbjct: 181 ETT-EFKYEILVNRLRELAFLNKGVKITL----MDARSGVSDTFHYEGGIVQFVQYLNEG 235
Query: 314 KKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K P+++ V+ F K D +++A+Q+ +D YS+ +L +AN+I T +GGTH+ G +++LTR
Sbjct: 236 KTPVNEKVIYFEKQKDTTDVEIAMQY-NDGYSEIVLAFANNIHTTEGGTHLSGFRSALTR 294
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+ N KK+ +K D+ SGE +REGLT IISV++ NP+FEGQTKT+LGN +V+ +V+
Sbjct: 295 SFNDYAKKNSLLKG-DMQFSGEDIREGLTAIISVKLTNPQFEGQTKTKLGNSDVQGIVNS 353
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
V E L ++LE +P I+ K++ A +A AA++AR+L R+KSVL +++LPGKLADCS
Sbjct: 354 LVGEGLDDFLEENPSEARKIIDKAVQAFQAREAARKARELTRRKSVLENTTLPGKLADCS 413
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P + E+++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 414 ERDPSKCELYLVEGDSAGGSAKQGRNRLFQAIL-PLRGKILNVEKA 458
>gi|34541335|ref|NP_905814.1| DNA gyrase subunit B [Porphyromonas gingivalis W83]
gi|188994277|ref|YP_001928529.1| DNA gyrase B subunit [Porphyromonas gingivalis ATCC 33277]
gi|334146408|ref|YP_004509335.1| DNA gyrase subunit B [Porphyromonas gingivalis TDC60]
gi|419970237|ref|ZP_14485743.1| DNA gyrase, B subunit [Porphyromonas gingivalis W50]
gi|34397651|gb|AAQ66713.1| DNA gyrase, B subunit [Porphyromonas gingivalis W83]
gi|188593957|dbj|BAG32932.1| DNA gyrase B subunit [Porphyromonas gingivalis ATCC 33277]
gi|333803562|dbj|BAK24769.1| DNA gyrase, B subunit [Porphyromonas gingivalis TDC60]
gi|392611239|gb|EIW93981.1| DNA gyrase, B subunit [Porphyromonas gingivalis W50]
Length = 654
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/477 (48%), Positives = 312/477 (65%), Gaps = 13/477 (2%)
Query: 66 EAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAG 125
E K+N + Y + IQVLEGLEAVRKRPAMYIG +GLHHLVYE++DN++DEA AG
Sbjct: 3 EDIKKNTSASEYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLVYEVVDNSIDEALAG 62
Query: 126 YASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVS 185
Y N+EV + DNS++V DNGRGIP+D H KSALE VLTVLHAGGKF S Y VS
Sbjct: 63 YCDNVEVIIEEDNSITVRDNGRGIPVDYHEKEGKSALEVVLTVLHAGGKFDKGS--YKVS 120
Query: 186 GGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIR 245
GGLHGVG+S VNALS L V+R+G + Q++S GKP+ + + S +R GT I+
Sbjct: 121 GGLHGVGVSCVNALSTYLRAEVYRNGKIHMQEFSCGKPLHDVEV----IGSTERTGTTIQ 176
Query: 246 FWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQ-YNEYFFAG--G 302
F PD +F+ ++ ++ +A R+REL++LN +T+ L + + E Y + F G
Sbjct: 177 FKPDSSIFSVT-EYQYSILAKRLRELSYLNAGITLTLTDKRTLKEDGSGYKQDVFRSEEG 235
Query: 303 LEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGT 361
L+E+V+ L+ K+PL D V+ + GI +++A+ + + +Y + + Y N I TI+GGT
Sbjct: 236 LKEFVRHLDRMKEPLVDNVIHIVTEKQGIPVEVAMTYNT-SYLENVYSYVNDINTIEGGT 294
Query: 362 HIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 421
H+ G + LTRTL SK + + ++G+ REGLT +IS++V P+FEGQTKT+L
Sbjct: 295 HLAGFRRGLTRTLKKYATDSKLLDKVKVEITGDDFREGLTAVISIKVAEPQFEGQTKTKL 354
Query: 422 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 481
GN EV VD +V E L YLE HP I+ K + A A AA++AR++V++KS L
Sbjct: 355 GNNEVTGAVDMAVSEALEYYLEEHPKEAKLIVDKVVLAATARQAARKAREMVQRKSPLSG 414
Query: 482 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKLADCSS PE+ E+F+VEGDSAGG+AKQGRDR FQ I+ PL+ I A
Sbjct: 415 GGLPGKLADCSSKDPEQCELFLVEGDSAGGTAKQGRDREFQAIL-PLRGKILNVEKA 470
>gi|363898906|ref|ZP_09325424.1| DNA gyrase [Oribacterium sp. ACB1]
gi|395207927|ref|ZP_10397303.1| DNA gyrase, B subunit [Oribacterium sp. ACB8]
gi|361960036|gb|EHL13295.1| DNA gyrase [Oribacterium sp. ACB1]
gi|394706341|gb|EJF13857.1| DNA gyrase, B subunit [Oribacterium sp. ACB8]
Length = 652
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/466 (49%), Positives = 316/466 (67%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
SK YG++QIQ+LEGLEAVRKRP MYIGST RGLHHLVYEI+DN+VDEA AG+ NI V
Sbjct: 17 SKEYGADQIQILEGLEAVRKRPGMYIGSTSTRGLHHLVYEIVDNSVDEALAGFCDNITVT 76
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++V D+GRGIP+DL KSALE V TVLHAGGKFGGS GY VSGGLHGVG
Sbjct: 77 IHKDNSITVEDDGRGIPVDLQKKAGKSALEVVFTVLHAGGKFGGS--GYKVSGGLHGVGA 134
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS L+VTV +DG Y +S+GK + C + +++ GT++ F PD ++F
Sbjct: 135 SVVNALSTYLDVTVCKDGKIYTMSFSKGKVTKEIEC--IGTCTEEEHGTKVHFLPDAEIF 192
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
+I +D +T+ R+RE AFL L I L D E+ + + + GG++E+V +LN
Sbjct: 193 EESI-YDFDTLKVRLRETAFLTKNLRIKLV--DEREEELREMTFHYEGGIKEFVTYLNKG 249
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L+ DV+ + + I +++A+Q +D+Y++ + + N+I T +GGTH+ G K +LT+
Sbjct: 250 KEALYPDVIYCEGEKEQILVEVAMQH-NDSYTENIYTFVNNINTPEGGTHLTGFKNALTK 308
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
T N +++K +KD + +LSGE +REGLTCIISV++ +P+FEGQTK +LG E + V
Sbjct: 309 TFNDYARQNKLLKDSEPNLSGEDIREGLTCIISVKIEDPQFEGQTKQKLGTSEAQVAVQG 368
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
V E LT +LE +P V + KS+ A +A AA++ARDL R+KS L LPGKLADCS
Sbjct: 369 IVSEQLTYFLEQNPAVARVMCEKSIMAQRARAAARKARDLTRRKSALDGVGLPGKLADCS 428
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S E EIFIVEGDSA G AK+GR+ Q ++ PL+ + A
Sbjct: 429 SKDAERCEIFIVEGDSALGPAKEGRNPETQAVL-PLRGKVLNVQKA 473
>gi|429740969|ref|ZP_19274638.1| DNA gyrase, B subunit [Porphyromonas catoniae F0037]
gi|429159638|gb|EKY02135.1| DNA gyrase, B subunit [Porphyromonas catoniae F0037]
Length = 653
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/477 (48%), Positives = 310/477 (64%), Gaps = 12/477 (2%)
Query: 65 TEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQA 124
+E + K Y + IQVLEGLEAVRKRPAMYIG G +GLHHLVYE++DN++DEA A
Sbjct: 2 SEELFDQASEKEYSASSIQVLEGLEAVRKRPAMYIGDIGEKGLHHLVYEVVDNSIDEALA 61
Query: 125 GYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSV 184
GY ++I+V + DNS+ V DNGRGIP+D+H KSALE VLTVLHAGGKF S Y V
Sbjct: 62 GYCNDIKVIIHEDNSIEVQDNGRGIPVDIHEKEGKSALEVVLTVLHAGGKFDKGS--YKV 119
Query: 185 SGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRI 244
SGGLHGVG+S VNALS L+ V RDG Y +++S+G P T L + + DR GT I
Sbjct: 120 SGGLHGVGVSCVNALSTYLKAIVHRDGKIYTEEFSQGVPTTDLQT----IGTTDRTGTTI 175
Query: 245 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDS-DPEKNQYNE-YFFAGG 302
F PD +F+ ++ ++ R+RELAFLN +T+ L E D E E Y+ G
Sbjct: 176 IFKPDDTIFSVT-EYQFKILSNRLRELAFLNAGITLTLVDERVVDEEGKPLTEVYYSQDG 234
Query: 303 LEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGT 361
L+E+ ++++ K+ L DV+ + GI +++A+ + + +Y++ + Y N+I TI+GGT
Sbjct: 235 LKEFAKYIDRSKEHLVDDVIHIVTEKQGIPVEVAMTYNT-SYNENIYSYVNNINTIEGGT 293
Query: 362 HIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 421
H+ G + LTRTL SK + + ++G+ REGLT +IS++V P+FEGQTKT+L
Sbjct: 294 HLAGFRRGLTRTLKKYATDSKLLDKVKVEITGDDFREGLTAVISIKVAEPQFEGQTKTKL 353
Query: 422 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 481
GN EV VD +V E L YLE HP I+ K + A A AA++AR++V++KS L
Sbjct: 354 GNNEVMGAVDIAVSEALETYLEEHPKEAKVIVDKVILAATARQAARKAREMVQRKSPLSG 413
Query: 482 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKLADCSS P SE+F+VEGDSAGG+AKQGRDR FQ I+ PL+ I A
Sbjct: 414 GGLPGKLADCSSKDPVLSELFLVEGDSAGGTAKQGRDREFQAIL-PLRGKILNVEKA 469
>gi|294674979|ref|YP_003575595.1| DNA gyrase subunit B [Prevotella ruminicola 23]
gi|294471706|gb|ADE81095.1| DNA gyrase, B subunit [Prevotella ruminicola 23]
Length = 658
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/466 (49%), Positives = 312/466 (66%), Gaps = 16/466 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y + IQVLEGLEAVRKRPAMYIG +GLHHLV E +DN++DEA AGY ++IEV +
Sbjct: 10 QNYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLVNETVDNSIDEAMAGYCTHIEVTI 69
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DNS++V DNGRGIP+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 70 NEDNSITVQDNGRGIPVDEHEKMHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVS 127
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VNALS + V+R+G Y Q+Y +GKP+ + V D+ GTR +FWPD +FT
Sbjct: 128 CVNALSTHMMSQVFRNGHIYQQEYEKGKPLYDVKI----VGDTDKTGTRQQFWPDGSIFT 183
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKN-QYNEYFFAG-GLEEYVQWLNT 312
T ++ ++ IA R+RELA+LN +TI L D E N + E F A GL+E+V++++
Sbjct: 184 TT-EYKYDIIAKRMRELAYLNAGITITLTDLRPDEEGNLRQPEVFHAKEGLKEFVRYVDR 242
Query: 313 DKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+ + D + + + DG+ I++AL + SD YS+ + Y N+I TI+GGTH+ G + +L
Sbjct: 243 HRTSIIGDPICLKTEKDGVPIEVALLYNSD-YSENIHSYVNNINTIEGGTHLTGFRIALA 301
Query: 372 RTLNSLGKKS----KTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
RTL + K ++ I ++ + REGLT IISV+V P+FEGQTKT+LGN EV
Sbjct: 302 RTLKKYADEDDQLRKQIEKAKIEVAQDDFREGLTAIISVKVAEPQFEGQTKTKLGNSEVN 361
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
V ++V E +T YLE +P +I K + A A +AA++AR+ V++K+ + LPGK
Sbjct: 362 GAVQKAVGEAMTNYLEENPKEAHTICEKVILAATARIAARKARESVQRKNPMTGGGLPGK 421
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LADCS+ P+E EIF+VEGDSAGGSAKQGRDR FQ I+ PL+ I
Sbjct: 422 LADCSNKDPKECEIFLVEGDSAGGSAKQGRDRHFQAIL-PLRGKIL 466
>gi|85857848|ref|YP_460050.1| DNA gyrase subunit B [Syntrophus aciditrophicus SB]
gi|85720939|gb|ABC75882.1| DNA gyrase subunit B [Syntrophus aciditrophicus SB]
Length = 800
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 234/470 (49%), Positives = 316/470 (67%), Gaps = 21/470 (4%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ Y ++ I++LEGLEAVR RPAMYIGS G GLHHLVYE++DN++DEA AGY I V
Sbjct: 1 MTDNYSADSIKILEGLEAVRVRPAMYIGSIGKEGLHHLVYEVVDNSIDEASAGYCDKITV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS+ V DNGRGIP+D+H T SA E V+T LHAGGKF S+ Y +SGGLHGVG
Sbjct: 61 KIRVDNSIMVEDNGRGIPVDMHE-TGVSAAEVVMTKLHAGGKF--SNDSYKISGGLHGVG 117
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS S+E+ V RDG Y Q Y RG P L +GT+I F PD +
Sbjct: 118 VSVVNALSSSMELNVRRDGKVYSQSYVRGVPTAPLAV----TGQTSGRGTKIYFKPDDTI 173
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F ++F+ + +A R+RELAFLN + IAL + SD + +E+F+ GG+ +V+++N
Sbjct: 174 FE-ELEFNFDILANRLRELAFLNSGVRIALIDDRSD----RKSEFFYEGGIISFVEYINR 228
Query: 313 DKKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
+KK LH V G R+D T+++ALQ+ +D Y++ + +ANSI T +GGTH+ G ++
Sbjct: 229 NKKVLHKDPIYVSGEREDS---TVEVALQY-NDTYTENIFSFANSINTTEGGTHLSGFRS 284
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
+LTR N+ + +K+ SL GE +REGL C+ISV+V NP+FEGQTKT+LGN EVR
Sbjct: 285 ALTRVFNNYAVNNGLLKNGKESLRGEDLREGLACVISVKVQNPQFEGQTKTKLGNSEVRG 344
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+V+ V E + YLE +P V +L+K L A +A AA+RAR+L R+KS L +LPGKL
Sbjct: 345 LVEGIVYEKIGSYLEENPSVAKQLLNKCLEASRAREAARRARELTRRKSALEVGALPGKL 404
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
ADC P SE+++VEGDSAGGSAKQGRDRR Q I+ PL+ + A
Sbjct: 405 ADCQERDPARSELYLVEGDSAGGSAKQGRDRRNQAIL-PLRGKVLNVEKA 453
>gi|407456737|ref|YP_006735310.1| DNA gyrase subunit B [Chlamydia psittaci VS225]
gi|405783998|gb|AFS22745.1| DNA gyrase, B subunit [Chlamydia psittaci VS225]
Length = 807
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/475 (48%), Positives = 310/475 (65%), Gaps = 22/475 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
K Y + I VLEGL+AVR+RP MYIG TG GLHHLVYE++DN++DEA AGY S I V +
Sbjct: 7 KNYDASAITVLEGLQAVRERPGMYIGDTGITGLHHLVYEVVDNSIDEAMAGYCSEIHVRI 66
Query: 135 LADNSVSVADNGRGIPIDLHPATNK------SALETVLTVLHAGGKFGGSSSGYSVSGGL 188
L D ++++DNGRGIPI H +K SALE VLTVLHAGGKF S Y VSGGL
Sbjct: 67 LEDGGITISDNGRGIPIQTHEKESKKQGRDVSALEVVLTVLHAGGKFDKDS--YKVSGGL 124
Query: 189 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 248
HGVG+S VNAL+E L TV++D Y ++SRG PVT L + + D+QGT I F+P
Sbjct: 125 HGVGVSCVNALAEKLVATVYKDKQAYQMEFSRGVPVTGLQL----LGATDKQGTEITFYP 180
Query: 249 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQ 308
D ++F++ + FD + + R+RELAFLN +TI ++D D ++ +F+ GG++ +V
Sbjct: 181 DNKIFSSCV-FDRSILIKRLRELAFLNRGITIIF-EDDRDVSFDKVI-FFYEGGIQSFVS 237
Query: 309 WLNTDKKPLHD----VVGFRKDVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
+LN +K+ L + G R DG I + ALQW S YS+ + YAN+I T GGTH+
Sbjct: 238 YLNQNKESLFPEPIYISGSRTGDDGDIEFEAALQWNS-GYSELIYSYANNIPTRQGGTHL 296
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
G +LTR LN+ K K+ +SL+GE +REGLT ++SV+VPNP+FEGQTK +LGN
Sbjct: 297 TGFSTALTRVLNAYIKAHNLAKNDKLSLTGEDIREGLTAVVSVKVPNPQFEGQTKQKLGN 356
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
+V V Q E LT + + +P + I+ K A +A AAK+AR+L +KS L S+
Sbjct: 357 SDVGSVSQQITGEALTIFFDENPQIAKMIVEKVFIAAQAREAAKKARELTLRKSALDSAR 416
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKL DC P + E++IVEGDSAGGSAKQGRDRRFQ I+ P++ I A
Sbjct: 417 LPGKLIDCLEKDPAKCEMYIVEGDSAGGSAKQGRDRRFQAIL-PIRGKILNVEKA 470
>gi|383783298|ref|YP_005467864.1| DNA gyrase subunit B [Leptospirillum ferrooxidans C2-3]
gi|383082207|dbj|BAM05734.1| DNA gyrase, B subunit [Leptospirillum ferrooxidans C2-3]
Length = 814
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/463 (49%), Positives = 320/463 (69%), Gaps = 15/463 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+EQI+VLEGLEAVR RP MYIGSTG GLHHLVYE++DN+VDEA AG+ S+I++ + A
Sbjct: 10 YGAEQIRVLEGLEAVRVRPGMYIGSTGIDGLHHLVYELVDNSVDEALAGFCSHIDITIHA 69
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D+SV+V DNGRGIP +H +SA E VLTVLHAGGKF ++S Y VSGGLHGVG+SVV
Sbjct: 70 DHSVTVMDNGRGIPTGIHAEQKRSAAEVVLTVLHAGGKF--NNSLYKVSGGLHGVGVSVV 127
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS++LE+ + ++G + Q Y +G PV L V + +GT IRFWPD + T
Sbjct: 128 NALSQTLELEIHQEGKLHRQVYHQGVPVAPLAV----VGTTTLRGTSIRFWPDLSIMETD 183
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
F +T+A R RELAFLNP LTI LR+E+S E+ + F GG++ Y ++LN +KK
Sbjct: 184 T-FLFDTLAHRFRELAFLNPILTIVLREEESLREET----FHFEGGIKSYNEFLNENKKT 238
Query: 317 LHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
+H+V+ FR+++ G ++A Q+ ++T+LG+AN+I T +GGTHI+G + +LTR +N
Sbjct: 239 IHEVLFFRRELPTGAQFEVAFQYQETTDNETILGFANNIFTKEGGTHIKGFRTALTRVIN 298
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
K + K ++ L GE +REGLT ++SVR+P+P+FEGQTK +LG+ V ++ +
Sbjct: 299 RFIKDKQLNKGEE--LRGEDIREGLTAVVSVRIPDPQFEGQTKAKLGSSWVAGAMETFLA 356
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E + E E P + I K + A AA++A++L ++K+VL S+LPGKLADC +
Sbjct: 357 EEMQERFEEFPQIAKKIADKGIQTAMAREAARKAKELAKRKNVLEGSNLPGKLADCQESD 416
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P + E++IVEGDSAGGSAKQGRDR+FQ I+ PL+ I A
Sbjct: 417 PAKCELYIVEGDSAGGSAKQGRDRKFQAIL-PLKGKILNVEKA 458
>gi|307352947|ref|YP_003893998.1| DNA gyrase subunit B [Methanoplanus petrolearius DSM 11571]
gi|307156180|gb|ADN35560.1| DNA gyrase, B subunit [Methanoplanus petrolearius DSM 11571]
Length = 640
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 246/470 (52%), Positives = 328/470 (69%), Gaps = 18/470 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + I VLEGLE VR+RPAMYIGST RGLHHLVYE++DNAVDEA AG +I V L
Sbjct: 5 NYNASNITVLEGLEPVRERPAMYIGSTDVRGLHHLVYEVVDNAVDEALAGVCDHIIVTLG 64
Query: 136 ADNSVSVADNGRGIPIDLHPATN-KSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
D + +V DNGRGIP+D+ + KSALE V+TVLHAGGKF ++ Y VSGGLHGVG+S
Sbjct: 65 RDGTCTVEDNGRGIPVDIMEEQDGKSALEVVMTVLHAGGKFDKNT--YQVSGGLHGVGVS 122
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTC--HVLPVDSKDRQGTRIRFWPDKQV 252
VVNALSE L+V V+RDG Y ++RG + LT + P D+ ++ GT+I F PD +
Sbjct: 123 VVNALSEFLQVEVFRDGYIYDMGFARGGLKSDLTSRKNAAP-DAFEKHGTKISFKPDALI 181
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLN 311
F T + FD++ ++ R+RELAFLN +TI E SD E++ Y + F + GG+ E+V +L
Sbjct: 182 FET-VTFDYDILSHRMRELAFLNRGITI----EISD-ERSGYADIFNYEGGISEFVTYLI 235
Query: 312 TDKKPLH-DVVGF-RKDVDGIT-IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
T K+ +H DV+ F KD +T +++ALQ+ S AYS+TM+ + NS+ T +GGTH+EG ++
Sbjct: 236 TGKETVHPDVIYFDTKDAASMTEVEVALQY-STAYSETMMTFVNSVNTREGGTHLEGFRS 294
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
+LTR +N K + +K SL GE VREGL +IS++V NP+FEGQTK RLGN V+
Sbjct: 295 ALTRAINKSAKDNNLMKGMSESLKGEDVREGLVTVISLKVANPQFEGQTKMRLGNSNVKG 354
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
+VD V + LTEY E +P V+ +I+SK++ A +A AA++AR+L R+KS L S LPGKL
Sbjct: 355 IVDSLVYQSLTEYFEENPKVIQAIVSKAVGAARAREAARKARELARRKSTLESGGLPGKL 414
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
ADCS P +SEI+IVEGDSAGGSAKQGR R+FQ I+ PL+ I A
Sbjct: 415 ADCSERDPSKSEIYIVEGDSAGGSAKQGRSRQFQAIL-PLRGKILNVEKA 463
>gi|448678345|ref|ZP_21689352.1| DNA gyrase subunit B [Haloarcula argentinensis DSM 12282]
gi|445772332|gb|EMA23377.1| DNA gyrase subunit B [Haloarcula argentinensis DSM 12282]
Length = 642
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/466 (49%), Positives = 321/466 (68%), Gaps = 17/466 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S YG++ IQ LEGLEAV+KRPAMYIGST RGLHHLVYE++DNA+DEA AGY NI+V
Sbjct: 5 SDEYGAKSIQTLEGLEAVQKRPAMYIGSTDARGLHHLVYEVVDNAIDEALAGYCDNIDVT 64
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ D SVSV+D+GRGIP+D H + A+E V+T+LHAGGKF S Y VSGGLHGVG+
Sbjct: 65 IHDDGSVSVSDDGRGIPVDTHEEHGRPAVEVVMTILHAGGKFDNKS--YQVSGGLHGVGV 122
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V RDG + Q++ GKP L V ++ + GT ++FWPD ++F
Sbjct: 123 SVVNALSKWLEVEVRRDGALWKQRFDHGKPEYDLK-KVRDLEPDEETGTTVQFWPDDEIF 181
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKE-DSDPEKNQYNEYFFAGGLEEYVQWLNT 312
T +F +T++ R+RELAFLN + I++ E D + E Y+ GG+ E+V++LN
Sbjct: 182 ETG-EFKFSTLSSRLRELAFLNSGVAISIHDERDGETETFAYD-----GGIREFVEYLNE 235
Query: 313 DKKPLH-DVVGFRKDVD----GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
K PLH D++ F + + + +++A+Q D ++ +AN+I T +GGTH+ G K
Sbjct: 236 TKDPLHRDIIYFEDEEEIAEGPVQVEIAMQGTDDLQG-SIHAFANNINTREGGTHLTGFK 294
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
SLTR +N + +KD D +L G+ +REGLT +ISV+ P+P+FEGQTKT+LGN EVR
Sbjct: 295 TSLTRVVNDYATDNNLLKDLDDTLKGDDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVR 354
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
+V+ ++ + L + E +PD + I+ K++ A KA AA++A +L R+KS L S++LPGK
Sbjct: 355 GIVESAMHDGLATFFEENPDTAEVIVGKAVEAAKARKAAQKAEELTRRKSALDSTALPGK 414
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LADC + PEE+E+FI EGDSAGGSAKQGR+ FQ I+ P++ I
Sbjct: 415 LADCQTRDPEEAELFIAEGDSAGGSAKQGRNPDFQAIL-PIKGKIL 459
>gi|330470839|ref|YP_004408582.1| DNA gyrase subunit B [Verrucosispora maris AB-18-032]
gi|328813810|gb|AEB47982.1| DNA gyrase subunit B [Verrucosispora maris AB-18-032]
Length = 648
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 236/469 (50%), Positives = 316/469 (67%), Gaps = 15/469 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ YG+E I VLEGLEAVRKRP MYIGSTG RGLHHLV+E++DNAVDEA AG+ I+V
Sbjct: 6 NQQYGAESITVLEGLEAVRKRPGMYIGSTGERGLHHLVWEVVDNAVDEALAGHCDTIDVV 65
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
LLAD V V DNGRG P+DLHP K +E LTVLHAGGKF G + Y+VSGGLHGVG+
Sbjct: 66 LLADGGVRVTDNGRGFPVDLHPKLKKPGVEVALTVLHAGGKFDGKA--YAVSGGLHGVGV 123
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS + V + +DG + Q+Y KP T + DR G+ + FWPD VF
Sbjct: 124 SVVNALSTRMAVEIHKDGFVWRQQYDHSKPSTLEKG-----EPTDRTGSAVSFWPDPDVF 178
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKED-SDPEKNQYNEYFFA--GGLEEYVQWL 310
T FD TI R++E+AFL LTI L E ++ E + E F GG+ ++V+ L
Sbjct: 179 ETT-DFDFQTIYRRLQEMAFLTRGLTIHLLDERVAEGEDGKVREVTFKYDGGIADFVRHL 237
Query: 311 NTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
N K P+H V+ F + +G+++++A+QW +++Y +++ +AN+I T +GGTH EG +A+
Sbjct: 238 NASKSPMHKTVIEFGAEEEGMSLEIAMQW-NESYGESVYTFANNINTHEGGTHEEGFRAA 296
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
LT +N G K +K D LSGE +REGL IISV++ NP+FEGQTKT+LGN V+
Sbjct: 297 LTSVVNRYGADKKLLK-GDEKLSGEDIREGLAAIISVKLTNPQFEGQTKTKLGNTPVKSF 355
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
V + + L ++L+ +P I++K+ A +A +AA++AR L R+KS+L S S+PGKLA
Sbjct: 356 VQRVCNDRLVDWLDRNPAEAKIIITKASQAARARIAAQQARKLARRKSLLESGSMPGKLA 415
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
DC ST P ESE+FIVEGDSAGGSAKQGRD R Q I+ P++ I A
Sbjct: 416 DCQSTDPRESEVFIVEGDSAGGSAKQGRDPRTQAIL-PIRGKILNVEKA 463
>gi|420144430|ref|ZP_14651918.1| DNA gyrase subunit B [Lactococcus garvieae IPLA 31405]
gi|391855882|gb|EIT66431.1| DNA gyrase subunit B [Lactococcus garvieae IPLA 31405]
Length = 652
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/467 (48%), Positives = 325/467 (69%), Gaps = 10/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA AG+AS+IEV
Sbjct: 12 MAEEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALAGFASHIEV 71
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V D+GRGIP+D+ T + A+ETV T+LHAGGKFGG S LHGVG
Sbjct: 72 FIEPDNSITVVDDGRGIPVDIQEKTGRPAVETVFTILHAGGKFGGGGYKVSGG--LHGVG 129
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
SVVNALS L+VTV +DG +Y+Q+Y RG V L + D++GT + F PD +
Sbjct: 130 SSVVNALSTQLDVTVHKDGQKYYQEYHRGVVVEDLAI----IGETDKRGTVVHFTPDPTI 185
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FT FD++ + R+RELAFLN L I++ + + ++N + + + GG++ YV ++N
Sbjct: 186 FTETQIFDYDKLVTRVRELAFLNRGLRISI-TDKREGQENNHAMFHYEGGIQSYVSFINE 244
Query: 313 DKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K+ + D + + +++GIT+++A+Q+ Y T++ +AN+I T +GGTH +G + +LT
Sbjct: 245 NKEVIFDTPIYTEGELEGITVEVAMQYTG-TYHSTIMSFANNINTHEGGTHEQGFRTALT 303
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R +N+ K K +KD + +L+G+ VREGLT +ISV+ PNP+FEGQTKT+LGN EV +V+
Sbjct: 304 RAINNYAKAQKLLKDNEENLTGDDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVTGIVN 363
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+ E L ++ +P V I+ K + A KA +AAKRAR++ R+KS L S+LPGKLADC
Sbjct: 364 KLFSEALQTFMLENPQVAKKIVEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLADC 423
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SS P+++E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 424 SSNDPKQTELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 469
>gi|31071481|dbj|BAC76789.1| DNA gyrase B subunit [Hapalosiphon sp. IAM M-264]
Length = 396
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/401 (56%), Positives = 296/401 (73%), Gaps = 9/401 (2%)
Query: 102 TGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSA 161
TGPRGLHHLVYE++DN++DEA AGY +++EV L AD SV+V D+GRGIP + T KS
Sbjct: 1 TGPRGLHHLVYEVVDNSIDEALAGYCTHVEVDLNADGSVTVTDDGRGIPTGIVAKTGKSG 60
Query: 162 LETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG 221
LETVLTVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD + Q+Y RG
Sbjct: 61 LETVLTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEWVEVTVWRDQKVHTQRYERG 118
Query: 222 KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIA 281
PVT L +R GT + F PD Q+FTT +FD+ T+A R+RELA+LN + I
Sbjct: 119 IPVTELNAKPY---KDNRTGTSVTFQPDSQIFTTGTEFDYTTLASRLRELAYLNAGVKIT 175
Query: 282 L---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQ 337
R + ++ + Y + GG+ EY+ ++N DK+PLH+ V+ + + + + +++ALQ
Sbjct: 176 FTDHRLQLLKSDQPKVETYEYKGGIREYITYINADKQPLHEEVIYVQGERNNVQVEVALQ 235
Query: 338 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 397
WC+DAY+D +LG+AN+IRT+DGGTH+EG+KA LTRTLN++ +K +KD + +LSGEHVR
Sbjct: 236 WCTDAYTDNVLGFANNIRTVDGGTHLEGLKAVLTRTLNAIARKRNKIKDSEPNLSGEHVR 295
Query: 398 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 457
EGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE HP V D+IL K++
Sbjct: 296 EGLTGLISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGETLTEYLEFHPSVADAILDKAI 355
Query: 458 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEE 498
A KAA AA+ AR+LVR+KSVL SS LPGKLADCSS P+E
Sbjct: 356 QAFKAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPKE 396
>gi|409386044|ref|ZP_11238523.1| DNA gyrase subunit B [Lactococcus raffinolactis 4877]
gi|399206655|emb|CCK19438.1| DNA gyrase subunit B [Lactococcus raffinolactis 4877]
Length = 653
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/463 (49%), Positives = 318/463 (68%), Gaps = 11/463 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA AG+AS+IEV +
Sbjct: 19 YDASQIQVLEGLEAVRMRPGMYIGSTSSEGLHHLVWEIVDNSIDEALAGFASHIEVFIEP 78
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNS++V D+GRGIP+D+ T + A+ETV TVLHAGGKFGG S LHGVG SVV
Sbjct: 79 DNSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGSSVV 136
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS L+VTV++ G +Y+Q+Y RG + + + DR GT + F PD +FT
Sbjct: 137 NALSTQLDVTVFKQGKKYYQEYHRG----VVGGDLEMIGETDRHGTTVHFTPDPTIFTET 192
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+FD +A R+RELAFLN L I++ D PE+ + Y + GG++ YV++LN +K
Sbjct: 193 TEFDFQKLAKRVRELAFLNSGLRISIT--DKRPEEAESLHYHYEGGIQSYVEYLNEEKTV 250
Query: 317 LHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
L + F + +++GI +++A+Q+ +Y +L +AN+I T +GGTH +G + +LTR +N
Sbjct: 251 LFEPAIFTEGEMEGIAVEVAMQYTG-SYHSMVLSFANNISTHEGGTHEQGFRTALTRVIN 309
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+ K +K +K+ + +L+G+ VREGLT +ISV+ PNP+FEGQTKT+LGN EV +V++
Sbjct: 310 NYAKSNKLLKENEENLTGDDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVSGIVNKLFS 369
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E +L +P V I+ K + A KA +AAKRAR++ R+KS L S+LPGKLADCSS
Sbjct: 370 EEFGTFLLENPQVARRIVEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLADCSSND 429
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P ++EIFIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 430 PTQTEIFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 471
>gi|340350611|ref|ZP_08673590.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella
nigrescens ATCC 33563]
gi|445114741|ref|ZP_21378019.1| DNA gyrase, B subunit [Prevotella nigrescens F0103]
gi|339607607|gb|EGQ12539.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella
nigrescens ATCC 33563]
gi|444840613|gb|ELX67641.1| DNA gyrase, B subunit [Prevotella nigrescens F0103]
Length = 656
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/463 (49%), Positives = 310/463 (66%), Gaps = 15/463 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY S+IEV +
Sbjct: 11 YSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCSHIEVTINE 70
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNSV+V D+GRGIP+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S V
Sbjct: 71 DNSVTVEDDGRGIPVDEHEKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCV 128
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS ++ V+R+G Y Q+Y +GKP+ + V D+ GTR +FWPD +FTT
Sbjct: 129 NALSSHMKSQVFRNGKIYQQEYEQGKPLYPVKV----VGETDKTGTRQQFWPDGSIFTTT 184
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKK 315
I F + +A R+RELAFLN + I L + E E F A GL+E+V++++ +
Sbjct: 185 I-FQWDIVARRMRELAFLNAGIKITLTDLRPNTEGKTRQEVFHAKDGLKEFVRYVDRHRT 243
Query: 316 PL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
L DV+ + + GI I++A+ + +D Y++ + Y N+I TI+GGTH+ G + +LTRTL
Sbjct: 244 HLFDDVIYLKTEKQGIPIEVAIMYNTD-YNENIHSYVNNINTIEGGTHLTGFRTALTRTL 302
Query: 375 NSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
+ +K ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV V
Sbjct: 303 KAYADNDPQIAKQIEKAKIEITGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAV 362
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
Q+V E L+ YLE +P I K + A A +AA++AR+ V++K+V+ LPGKLAD
Sbjct: 363 QQAVGEALSYYLEENPAEAKLICDKVILAATARIAARKARESVQRKNVMTGGGLPGKLAD 422
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
CS+ P++ EIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 423 CSNKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAIL-PLRGKIL 464
>gi|295111747|emb|CBL28497.1| DNA gyrase subunit B [Synergistetes bacterium SGP1]
Length = 644
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 239/466 (51%), Positives = 316/466 (67%), Gaps = 21/466 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + +I+VLEGLEAVRKRP MYIG TGPRGLHHLV E++DN++DEA AG+ + I+V +
Sbjct: 15 YNANKIKVLEGLEAVRKRPGMYIGDTGPRGLHHLVNEVVDNSIDEAMAGFCTRIDVTIHK 74
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV+V D+GRGIP D HP+ + E VLT LHAGGKF YSVSGGLHGVG+S V
Sbjct: 75 DESVTVQDDGRGIPTDPHPSNGRPTCEVVLTRLHAGGKF--EQGAYSVSGGLHGVGVSAV 132
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE EVT+ R+GME Q++ RG PVT L+ V PVD QGTRI + PDK++F
Sbjct: 133 NALSEWFEVTIARNGMERTQRFERGVPVTDLSEGV-PVDW---QGTRIHYLPDKEIFED- 187
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+ T+ R ELAFLN + I + +D ++ EY F GG+ +VQ+LN D+
Sbjct: 188 VHHSLETLKSRFMELAFLNAGVRIFV----TDERSSESREYHFEGGVSAFVQYLNRDRTT 243
Query: 317 LHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
L + G R D I +D+ALQ+ +D Y + +L YAN I T++GGTH+ G++ +LTR
Sbjct: 244 LFAPPVVISGERND---IKVDMALQY-NDEYQERILTYANLIHTVEGGTHLMGLRQALTR 299
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LN + K + DK+ +L+G+ ++EGLTC++SV++ P+FEGQTKT+LGN +VR VD
Sbjct: 300 ALNEAARSGKLLNDKEDNLTGDDLKEGLTCVLSVKLVEPQFEGQTKTKLGNSDVRGAVDS 359
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
V E L +E PD++ I+ K+L A +A AAK+A++LVR K + +LPGKLADCS
Sbjct: 360 VVYEGLLSVIEERPDIVRPIVDKALRARRAREAAKKAKELVR-KGAMTGMNLPGKLADCS 418
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S TPE SEI+IVEGDSAGGSAKQ RDR FQ I+ PL+ I A
Sbjct: 419 SKTPENSEIYIVEGDSAGGSAKQARDRTFQAIL-PLRGKILNVEKA 463
>gi|359688817|ref|ZP_09258818.1| DNA gyrase subunit B [Leptospira licerasiae serovar Varillal str.
MMD0835]
gi|418749228|ref|ZP_13305520.1| DNA gyrase, B subunit [Leptospira licerasiae str. MMD4847]
gi|418757357|ref|ZP_13313545.1| DNA gyrase, B subunit [Leptospira licerasiae serovar Varillal str.
VAR 010]
gi|384117028|gb|EIE03285.1| DNA gyrase, B subunit [Leptospira licerasiae serovar Varillal str.
VAR 010]
gi|404276297|gb|EJZ43611.1| DNA gyrase, B subunit [Leptospira licerasiae str. MMD4847]
Length = 637
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/465 (48%), Positives = 314/465 (67%), Gaps = 14/465 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y + QI++LEGLEAVRKRP MYIG+ GLH +VYE++DN+VDEA AG+ ++I +++L
Sbjct: 7 SYSAGQIKILEGLEAVRKRPGMYIGTQDETGLHKMVYEVVDNSVDEAMAGHCTDITISIL 66
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DN + V DNGRGIP+ +HP N S +E V+T+LHAGGKF + Y VSGGLHGVG+SV
Sbjct: 67 PDNIIEVKDNGRGIPVAIHPEKNISTIEVVMTILHAGGKF--ENDAYKVSGGLHGVGVSV 124
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALSESLEV V+++G + QKYSRG P+ + + +GT +RF PD +FTT
Sbjct: 125 VNALSESLEVEVYQNGKIHQQKYSRGIPLGPVNV----IGDTTERGTVVRFKPDATIFTT 180
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALR-KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
+F + + R RELAFLN L + ++ K D EK+ E+ F GG+ +V++LN +K
Sbjct: 181 T-EFHFDVLTSRFRELAFLNKGLKLIVQDKRKPDSEKH---EFLFDGGIVSFVEYLNENK 236
Query: 315 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
PLH + F ++ D + ++A+Q+ SD YS+ + + N+I GGTH+EG +A+LTRTL
Sbjct: 237 HPLHKTIHFERNKDDVVAEIAIQY-SDTYSENIFCFTNNINNNLGGTHLEGFRAALTRTL 295
Query: 375 NSLGKKSKT-VKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
N KK + VK + +LSGE ++EG+T +ISV++P P+F QTK +L N E++ ++
Sbjct: 296 NDFLKKDQQLVKKQPTALSGEDLKEGITAVISVKIPQPQFNSQTKEKLVNAEIKGIMQTL 355
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
E L+ + E +P + IL K + + KA AA++ARDL R+KSVL LPGKLADCS
Sbjct: 356 TGEGLSLFFEENPAITKKILEKCILSAKAREAARKARDLTRRKSVLEGGGLPGKLADCSE 415
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE++IVEGDSAGGSAKQGRDR +Q I+ PL+ I A
Sbjct: 416 KDPAASELYIVEGDSAGGSAKQGRDRHYQAIL-PLKGKILNVEKA 459
>gi|23978284|dbj|BAC21125.1| DNA gyrase B subunit [Chroococcidiopsis sp. PCC 7431]
Length = 396
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/401 (56%), Positives = 294/401 (73%), Gaps = 9/401 (2%)
Query: 102 TGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSA 161
TGPRGLHHLVYE++DN++DEA AGY ++IE+ L AD SV V D+GRGIP D HP T KSA
Sbjct: 1 TGPRGLHHLVYEVVDNSIDEALAGYCTHIEIDLNADGSVQVVDDGRGIPTDTHPQTGKSA 60
Query: 162 LETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG 221
LETV+TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD + Q+Y RG
Sbjct: 61 LETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVEVTVWRDKKVHTQRYERG 118
Query: 222 KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIA 281
P+ L + + GT +RF PD ++FT +FD+ T+AGR+RELA+LN + I
Sbjct: 119 VPMGELQTKSF---KEAKTGTGVRFKPDAEIFTVGTEFDYITLAGRLRELAYLNAGVRIT 175
Query: 282 L---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLALQ 337
R E ++ + Y + GG+ EYV ++N DK+ LH+ + F + + + + +++ALQ
Sbjct: 176 FTDHRLELLKSQEPKVETYEYKGGIREYVSYINNDKQALHEEIIFVQGERNNVQVEVALQ 235
Query: 338 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 397
WC+DAY+D +LG+AN+IRT+DGGTH+EG+K LTRTLN++ +K +KD + +LSGEHVR
Sbjct: 236 WCTDAYTDNLLGFANNIRTVDGGTHLEGLKTVLTRTLNAIARKRNKIKDNEPNLSGEHVR 295
Query: 398 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 457
EGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE P + DSIL K++
Sbjct: 296 EGLTAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFRPSIADSILDKAI 355
Query: 458 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEE 498
A KAA AA+ AR+LVR+KSVL SS LPGKLADCSS P E
Sbjct: 356 QAFKAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPGE 396
>gi|319651104|ref|ZP_08005238.1| DNA topoisomerase IV subunit B [Bacillus sp. 2_A_57_CT2]
gi|317397274|gb|EFV77978.1| DNA topoisomerase IV subunit B [Bacillus sp. 2_A_57_CT2]
Length = 642
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 238/465 (51%), Positives = 317/465 (68%), Gaps = 12/465 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
++Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY S I V +
Sbjct: 11 QSYDENQIQVLEGLEAVRKRPGMYIGSTSAKGLHHLVWEIVDNSIDEALAGYCSEINVII 70
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DNS++V DNGRGIP+ +H + A+E ++TVLHAGGKFGG S LHGVG S
Sbjct: 71 EKDNSITVVDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGAS 128
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS LEV V RDG +Y+QK+ RG P L + D GT I F PD ++FT
Sbjct: 129 VVNALSTVLEVFVHRDGQKYYQKFERGVPSADLEV----IGETDHTGTTIHFKPDSEIFT 184
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
+++D+ T+A RIRELAFLN L I + + E+N+ +EY + GG++ YV+ LN K
Sbjct: 185 ETLEYDYETLANRIRELAFLNRGLKITI---EDKREENKKSEYMYEGGIKSYVEHLNRTK 241
Query: 315 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+ LH+ + + +GIT+++++Q+ +D ++ + +AN+I T +GGTH G K +LTR
Sbjct: 242 EVLHEEPIYIDGEREGITVEVSIQY-NDGFTSNIYSFANNIHTYEGGTHESGFKTALTRV 300
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N +K+ K+ D +LSGE VREGLT I+SV+ P+P+FEGQTKT+LGN EVR D
Sbjct: 301 INDYARKNGVFKESDANLSGEDVREGLTAIVSVKHPDPQFEGQTKTKLGNSEVRAATDTI 360
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
E L +++ +P V I+ K L A +A LAAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 361 FSEALEKFMLENPTVARKIVEKGLMAARARLAAKKARELTRRKSALEVSSLPGKLADCSS 420
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE+++VEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 421 KDPSISELYVVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 464
>gi|407455348|ref|YP_006734239.1| DNA gyrase subunit B [Chlamydia psittaci GR9]
gi|405781891|gb|AFS20640.1| DNA gyrase, B subunit [Chlamydia psittaci GR9]
Length = 806
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/475 (48%), Positives = 310/475 (65%), Gaps = 22/475 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
K Y + I VLEGL+AVR+RP MYIG TG GLHHLVYE++DN++DEA AGY S I V +
Sbjct: 6 KNYDASAITVLEGLQAVRERPGMYIGDTGITGLHHLVYEVVDNSIDEAMAGYCSEIHVRI 65
Query: 135 LADNSVSVADNGRGIPIDLHPATNK------SALETVLTVLHAGGKFGGSSSGYSVSGGL 188
L D ++++DNGRGIPI H +K +ALE VLTVLHAGGKF S Y VSGGL
Sbjct: 66 LEDGGITISDNGRGIPIQTHEKESKKQGRDVAALEVVLTVLHAGGKFDKDS--YKVSGGL 123
Query: 189 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 248
HGVG+S VNAL+E L TV++D Y ++SRG PVT L + + D+QGT I F+P
Sbjct: 124 HGVGVSCVNALAEKLVATVYKDKQAYQMEFSRGVPVTGLQL----LGATDKQGTEITFYP 179
Query: 249 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQ 308
D ++F++ + FD + + R+RELAFLN +TI ++D D ++ +F+ GG++ +V
Sbjct: 180 DNKIFSSCV-FDRSILIKRLRELAFLNRGITIIF-EDDRDVSFDKVI-FFYEGGIQSFVS 236
Query: 309 WLNTDKKPLHD----VVGFRKDVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
+LN +K+ L + G R DG I + ALQW S YS+ + YAN+I T GGTH+
Sbjct: 237 YLNQNKESLFPEPIYISGSRTGDDGDIEFEAALQWNS-GYSELIYSYANNIPTRQGGTHL 295
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
G +LTR LN+ K K+ +SL+GE +REGLT ++SV+VPNP+FEGQTK +LGN
Sbjct: 296 TGFSTALTRVLNAYIKAHNLAKNDKLSLTGEDIREGLTAVVSVKVPNPQFEGQTKQKLGN 355
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
+V V Q E LT + + +P + I+ K A +A AAK+AR+L +KS L S+
Sbjct: 356 SDVGSVSQQITGEALTIFFDENPQIAKMIVEKVFIAAQAREAAKKARELTLRKSALDSAR 415
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKL DC P + E++IVEGDSAGGSAKQGRDRRFQ I+ P++ I A
Sbjct: 416 LPGKLIDCLEKDPAKCEMYIVEGDSAGGSAKQGRDRRFQAIL-PIRGKILNVEKA 469
>gi|347521877|ref|YP_004779448.1| DNA gyrase subunit B [Lactococcus garvieae ATCC 49156]
gi|385833261|ref|YP_005871036.1| DNA gyrase subunit B [Lactococcus garvieae Lg2]
gi|343180445|dbj|BAK58784.1| DNA gyrase subunit B [Lactococcus garvieae ATCC 49156]
gi|343182414|dbj|BAK60752.1| DNA gyrase subunit B [Lactococcus garvieae Lg2]
Length = 652
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/467 (48%), Positives = 325/467 (69%), Gaps = 10/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA AG+AS+IEV
Sbjct: 12 MAEEYDASQIQVLEGLEAVRMRPGMYIGSTSNEGLHHLVWEIVDNSIDEALAGFASHIEV 71
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V D+GRGIP+D+ T + A+ETV T+LHAGGKFGG S LHGVG
Sbjct: 72 FIEPDNSITVVDDGRGIPVDIQEKTGRPAVETVFTILHAGGKFGGGGYKVSGG--LHGVG 129
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
SVVNALS L+VTV +DG +Y+Q+Y RG V L + D++GT + F PD +
Sbjct: 130 SSVVNALSTQLDVTVHKDGQKYYQEYHRGVVVEDLAI----IGETDKRGTVVHFTPDPTI 185
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FT FD++ + R+RELAFLN L I++ + + ++N + + + GG++ YV ++N
Sbjct: 186 FTETQVFDYDKLVTRVRELAFLNRGLRISI-TDKREGQENNHAMFHYEGGIQSYVSFINE 244
Query: 313 DKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K+ + D + + +++GIT+++A+Q+ Y T++ +AN+I T +GGTH +G + +LT
Sbjct: 245 NKEVIFDTPIYTEGELEGITVEVAMQYTG-TYHSTIMSFANNINTHEGGTHEQGFRTALT 303
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R +N+ K K +KD + +L+G+ VREGLT +ISV+ PNP+FEGQTKT+LGN EV +V+
Sbjct: 304 RAINNYAKAQKLLKDNEENLTGDDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVTGIVN 363
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+ E L ++ +P V I+ K + A KA +AAKRAR++ R+KS L S+LPGKLADC
Sbjct: 364 KLFSEALQTFMLENPQVAKKIVEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLADC 423
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SS P+++E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 424 SSNDPKQTELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 469
>gi|313674412|ref|YP_004052408.1| DNA gyrase subunit b [Marivirga tractuosa DSM 4126]
gi|312941110|gb|ADR20300.1| DNA gyrase subunit B [Marivirga tractuosa DSM 4126]
Length = 653
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/469 (48%), Positives = 314/469 (66%), Gaps = 13/469 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+K Y + I VLEGLEAVRKRPAMYIG G +GLHH+++E++DN++DEA AG+ + I V
Sbjct: 9 NKDYSAGNITVLEGLEAVRKRPAMYIGDVGVKGLHHMIWEVVDNSIDEAMAGHCTTITVE 68
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNSV+V D+GRGIP+D+H +SALE V+TVLHAGGKF S Y VSGGLHGVG+
Sbjct: 69 INEDNSVTVMDDGRGIPVDIHEKEGRSALEVVMTVLHAGGKFDKDS--YKVSGGLHGVGV 126
Query: 194 SVVNALSESLEVTVW-RDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
S VNALS L+ TV+ RDG Y Q+YS G P V PV D GT+I+F PD +
Sbjct: 127 SCVNALSTMLKATVYSRDGKIYEQEYSEGFPKEP----VKPVGETDVTGTKIQFKPDASI 182
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE-DSDPEKNQYNEYFFA-GGLEEYVQWL 310
F +F + T+A R+RELA+LN + I L+ D D + E FF+ GGL E+V++L
Sbjct: 183 FMET-EFKYETVASRLRELAYLNAGIKIKLQDHRDKDENGDSKEENFFSEGGLLEFVEYL 241
Query: 311 NTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
+ ++ L + + +G+ + +AL + + +YS+ ++ Y N+I TI+GGTH+ G + +
Sbjct: 242 DVSREKLIPQPIYMEGEKNGVPVQVALNYNT-SYSENVVSYVNNINTIEGGTHVSGFRRA 300
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
LTRTL S KS ++ + I ++G+ REGLT IISV+V P+FEGQTKT+LGN +V
Sbjct: 301 LTRTLKSYADKSGLLEKQKIEITGDDFREGLTAIISVKVAEPQFEGQTKTKLGNSDVMGA 360
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
V+ V E L +LE +P +I+ K + A +A AAK+AR++V++K+V+ S LPGKLA
Sbjct: 361 VESCVSETLQYFLEENPKAAKTIVQKVILAAQARNAAKKAREMVQRKNVMSGSGLPGKLA 420
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
DCS P E+++VEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 421 DCSEKDPSICELYLVEGDSAGGSAKQGRDRNFQAIL-PLKGKILNVEKA 468
>gi|327401204|ref|YP_004342043.1| DNA gyrase subunit B [Archaeoglobus veneficus SNP6]
gi|327316712|gb|AEA47328.1| DNA gyrase, B subunit [Archaeoglobus veneficus SNP6]
Length = 621
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/462 (50%), Positives = 316/462 (68%), Gaps = 18/462 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +EQI+VL +EAVRKRP MYIG G RGLHHL++EI+DN++DEA AG+ NI V L
Sbjct: 3 YTAEQIEVLGDIEAVRKRPGMYIGGIGLRGLHHLLWEIVDNSIDEALAGHCKNITVTLHK 62
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D S SV D+GRGIP ++H + A+E VLT LHAGGKF + Y V+GGLHGVGLSVV
Sbjct: 63 DGSASVEDDGRGIPTEVH-ELGRPAVEIVLTKLHAGGKF--NKKAYKVAGGLHGVGLSVV 119
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LEV V R+G Y+QKY RG PVT L + GT+IRF PD+++F T
Sbjct: 120 NALSEWLEVWVKRNGKIYYQKYERGVPVTPLQV----IGETKETGTKIRFKPDEEIFETT 175
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+F + +A R++ELA+LN + + L E S K Y+E G++ +V LN +K
Sbjct: 176 -EFRWDIVAQRLKELAYLNKGIRLKLIDERSGKSKEFYSE----DGIKGFVAQLNKNKPV 230
Query: 317 LHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNS 376
+HDV+ F ++ +GI +++A+Q+ +D + +L +AN+I TI+GGTH G +A LTR +N
Sbjct: 231 IHDVIHFSEEKNGIMVEVAIQF-TDTEIENVLFFANNINTIEGGTHAVGFRAGLTRAINE 289
Query: 377 LGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQE 436
GKK VK K L+G +REGLT ++SV+VP P+FEGQTKT+L N EV+ VV+ V
Sbjct: 290 FGKKY--VK-KFKPLTGADIREGLTAVVSVKVPEPQFEGQTKTKLTNSEVKTVVESIVYS 346
Query: 437 YLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTP 496
+ ++LE HP+ + I+ K + A+KA AA++AR++VR+K + S +LPGKLADCSS P
Sbjct: 347 EVLKWLEEHPNEANRIIEKCILAMKAREAARKAREIVRRKGEI-SITLPGKLADCSSKNP 405
Query: 497 EESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
EE E+FIVEG+SAGGSAKQ RDRRFQ I+ P++ I A
Sbjct: 406 EERELFIVEGESAGGSAKQARDRRFQAIL-PIRGKIINVEKA 446
>gi|212692798|ref|ZP_03300926.1| hypothetical protein BACDOR_02296 [Bacteroides dorei DSM 17855]
gi|237709487|ref|ZP_04539968.1| DNA gyrase B subunit [Bacteroides sp. 9_1_42FAA]
gi|265754693|ref|ZP_06089745.1| DNA gyrase, B subunit [Bacteroides sp. 3_1_33FAA]
gi|345514532|ref|ZP_08794043.1| DNA gyrase, B subunit [Bacteroides dorei 5_1_36/D4]
gi|423230241|ref|ZP_17216645.1| DNA gyrase, B subunit [Bacteroides dorei CL02T00C15]
gi|423241032|ref|ZP_17222146.1| DNA gyrase, B subunit [Bacteroides dorei CL03T12C01]
gi|423243952|ref|ZP_17225027.1| DNA gyrase, B subunit [Bacteroides dorei CL02T12C06]
gi|212664587|gb|EEB25159.1| DNA gyrase, B subunit [Bacteroides dorei DSM 17855]
gi|229436655|gb|EEO46732.1| DNA gyrase, B subunit [Bacteroides dorei 5_1_36/D4]
gi|229456543|gb|EEO62264.1| DNA gyrase B subunit [Bacteroides sp. 9_1_42FAA]
gi|263234807|gb|EEZ20375.1| DNA gyrase, B subunit [Bacteroides sp. 3_1_33FAA]
gi|392631750|gb|EIY25719.1| DNA gyrase, B subunit [Bacteroides dorei CL02T00C15]
gi|392643094|gb|EIY36852.1| DNA gyrase, B subunit [Bacteroides dorei CL03T12C01]
gi|392643470|gb|EIY37220.1| DNA gyrase, B subunit [Bacteroides dorei CL02T12C06]
Length = 654
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/467 (48%), Positives = 304/467 (65%), Gaps = 14/467 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHLVYE++DN++DEA AGY +IEV +
Sbjct: 12 NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLVYEVVDNSIDEALAGYCDHIEVTIN 71
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+D H KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 72 EDNSITVQDNGRGIPVDFHEKEKKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 129
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT- 254
VNALS + V+R G Y Q+YS G P+ + V V + D GT+ FWPD +FT
Sbjct: 130 VNALSTHMTTQVFRGGKIYQQEYSCGHPLYS----VKEVGTADITGTKQTFWPDDTIFTV 185
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNT 312
T +FD + R+RELA+LN +TI+L E + + F G++E+V++LN
Sbjct: 186 TEYKFD--ILQARMRELAYLNKGITISLTDRRIKEEDGSFKKEIFHSDEGVKEFVRFLNR 243
Query: 313 DKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+ + L DV+ + + I+ A+ + + Y +++ Y N+I TI+GGTH G +++LT
Sbjct: 244 NNEALIDDVIYLNTEKNNTPIECAIMYNT-GYRESLHSYVNNINTIEGGTHEAGFRSALT 302
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R L + +K ++ + +SGE REGL +ISV+V P+FEGQTKT+LGN EV V+
Sbjct: 303 RVLKKYAEDTKALEKAKVEISGEDFREGLIAVISVKVAEPQFEGQTKTKLGNSEVSGAVN 362
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
Q+V E LT YLE HP I+ K + A A +AA++AR+ V++KS + LPGKLADC
Sbjct: 363 QAVGEALTYYLEEHPKEAKQIVDKVILAATARIAARKARESVQRKSPMGGGGLPGKLADC 422
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SS PEE E+F+VEGDSAGGSAKQGR R FQ I+ PL+ I A
Sbjct: 423 SSRNPEECELFLVEGDSAGGSAKQGRSRAFQAIL-PLRGKILNVEKA 468
>gi|212637854|ref|YP_002314374.1| DNA gyrase subunit B [Anoxybacillus flavithermus WK1]
gi|212559334|gb|ACJ32389.1| DNA gyrase subunit B [Anoxybacillus flavithermus WK1]
Length = 640
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 242/458 (52%), Positives = 315/458 (68%), Gaps = 12/458 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y QIQVLEGLEAVRKRP MYIGSTGP+GLHHLV+EI+DN++DEA AG+ + I V +
Sbjct: 11 YDESQIQVLEGLEAVRKRPGMYIGSTGPKGLHHLVWEIVDNSIDEALAGFCTEINVIVEE 70
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNS++V DNGRGIP+ +H + A+E ++TVLHAGGKFGG S LHGVG SVV
Sbjct: 71 DNSITVIDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVV 128
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LEV V RDG ++QKY RG P + L V DR GT I F PD ++FT
Sbjct: 129 NALSEELEVYVHRDGNIHYQKYKRGVPCSDLQV----VGETDRTGTTIHFKPDPEIFTET 184
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
++D++T+A R+RELAFLN + I L ED E N+ NEY++ GG+ YV+ LN K+
Sbjct: 185 TEYDYDTLAHRLRELAFLNKGIRITL--EDRRGE-NRRNEYYYEGGISSYVKHLNRTKET 241
Query: 317 LHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LH+ + + DGI +++ALQ+ +D Y+ + +AN+I T +GGTH G K +LTR +N
Sbjct: 242 LHEEPIYIEGEKDGIQVEIALQY-NDGYTSNIYSFANNIHTHEGGTHELGFKTALTRIIN 300
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
G+K+ KD+D +L+GE VREGLT IISV+ P P+FEGQTKT+LGN + R +
Sbjct: 301 DYGRKNNMFKDQDANLTGEDVREGLTAIISVKHPAPQFEGQTKTKLGNSDARTATESIFA 360
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E ++L +P V I+ K + A +A LAAKRAR+L R+K+ L SSLPGKLADCSS
Sbjct: 361 EQFEKFLLENPSVAKKIVEKGILASRARLAAKRARELTRRKNALEVSSLPGKLADCSSRD 420
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P E+++VEGDSAGGSAKQGRDR FQ I+ PL+ I
Sbjct: 421 PAICELYVVEGDSAGGSAKQGRDRHFQAIL-PLRGKII 457
>gi|326335208|ref|ZP_08201404.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Capnocytophaga sp.
oral taxon 338 str. F0234]
gi|325692616|gb|EGD34559.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Capnocytophaga sp.
oral taxon 338 str. F0234]
Length = 656
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/471 (47%), Positives = 315/471 (66%), Gaps = 17/471 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++ IQ LEG+E VR RP+MYIG G RGLHHLVYE+LDN++DEA AGY I V +
Sbjct: 10 YSADNIQSLEGMEHVRVRPSMYIGDVGMRGLHHLVYEVLDNSIDEALAGYCDTISVFINP 69
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNS++V DNGRGIP+D+H SALE V+T + AGGKF S Y VSGGLHGVG+SVV
Sbjct: 70 DNSITVEDNGRGIPVDIHKKEGVSALEVVMTKIGAGGKFDKGS--YKVSGGLHGVGVSVV 127
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS L TV+RDG E+ Q+Y RG + + V + +++GT++ F PD ++F +
Sbjct: 128 NALSTHLTATVYRDGKEWQQEYERGVALYS----VKEIGETNKRGTKVTFLPDTEIFQQS 183
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALR--KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
I+F ++ +A RIRELAFLN + I L +E D K E++ GL E++Q+L+ ++
Sbjct: 184 IEFSYDILASRIRELAFLNKGIRITLTDLREKDDQGKPLSQEFYSEKGLVEFIQYLDGNR 243
Query: 315 KPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
P+ ++ + + I +++A+ + +D++++ + Y N+I T +GGTH++G + LTRT
Sbjct: 244 PPIISKIISMEGEKNEIPVEVAMVY-NDSFNENLHSYVNNINTHEGGTHLQGFRMGLTRT 302
Query: 374 LNSLGKKS----KTVKDKD--ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
L + KS K KDK + +SG+ REGLT IISV+V P+FEGQTKT+LGN EV
Sbjct: 303 LKNYADKSGLLEKASKDKKNPLEISGDDFREGLTAIISVKVAEPQFEGQTKTKLGNREVT 362
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
V Q+V E L YLE +P+ +I++K + A +A LAAK+AR+ V++KS + + LPGK
Sbjct: 363 AAVSQAVSEMLESYLEENPEDAKTIVNKVILAAQARLAAKKAREAVQRKSPMGGAGLPGK 422
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LADC PE E+F+VEGDSAGG+AKQGRD++FQ I+ PL+ I A
Sbjct: 423 LADCQDKNPENCELFLVEGDSAGGTAKQGRDQKFQAIL-PLRGKILNVEKA 472
>gi|320537025|ref|ZP_08037004.1| DNA gyrase, B subunit [Treponema phagedenis F0421]
gi|320146100|gb|EFW37737.1| DNA gyrase, B subunit [Treponema phagedenis F0421]
Length = 638
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/458 (50%), Positives = 315/458 (68%), Gaps = 16/458 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
TY + I VLEGLEAVRKRP MYIGSTGP GLHHLVYE++DN +DEA AG+ I V L
Sbjct: 5 TYSASNITVLEGLEAVRKRPGMYIGSTGPNGLHHLVYEVVDNCIDEAMAGFCDRITVVLE 64
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
++ V V DNGRGIP+D+HP SALE VLT LHAGGKF S Y VSGGLHGVG+SV
Sbjct: 65 KNDIVRVEDNGRGIPVDIHPQEGISALEIVLTKLHAGGKFDKGS--YKVSGGLHGVGVSV 122
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS +E TV++DG E++QK+ G P+ + V + + D+ GT IR+ D +F
Sbjct: 123 VNALSTWMEATVYKDGAEHYQKFEIGVPLDS----VKKISTTDKHGTTIRWAADPAIFKE 178
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKED-SDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
+D + +A R+RELAFLN +TI +R E S P++ + F GG+ +VQ+L+ K
Sbjct: 179 TTTYDFDVLATRLRELAFLNSNITIVMRDERLSTPKEATFA---FEGGISHFVQYLHGTK 235
Query: 315 KPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+ L + + + + I +++ALQ+ +D Y++ +L + N I T +GGTH+EG K++LTR
Sbjct: 236 QVLPAEPIYIEAEKNDIIMEIALQY-NDGYNENLLSFVNDINTREGGTHLEGFKSALTRV 294
Query: 374 LNS-LGKKSKTVK--DKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
+N L K SK +K DK+ L+GE VR GLT +IS++VP P+FEGQTKT+LGN +VR +V
Sbjct: 295 MNEFLKKNSKLIKKLDKEEKLTGEDVRAGLTAVISIKVPEPQFEGQTKTKLGNSDVRGIV 354
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
D V E LT + E +P ++D IL K++S A +AA+RA++ R+KS L S LPGKLAD
Sbjct: 355 DSFVNEKLTLFFEQNPAIIDKILEKTVSEATARIAARRAKEATRRKSGLDSFGLPGKLAD 414
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPL 528
CS P+ E++IVEGDSAGGSAK+GRD + Q I+ PL
Sbjct: 415 CSLKDPKLCEVYIVEGDSAGGSAKKGRDSKTQAIL-PL 451
>gi|15835080|ref|NP_296839.1| DNA gyrase subunit B [Chlamydia muridarum Nigg]
gi|270285247|ref|ZP_06194641.1| DNA gyrase subunit B [Chlamydia muridarum Nigg]
gi|270289266|ref|ZP_06195568.1| DNA gyrase subunit B [Chlamydia muridarum Weiss]
gi|301336643|ref|ZP_07224845.1| DNA gyrase subunit B [Chlamydia muridarum MopnTet14]
gi|13627141|sp|Q9PKK3.1|GYRB_CHLMU RecName: Full=DNA gyrase subunit B
gi|7190505|gb|AAF39313.1| DNA gyrase, subunit B [Chlamydia muridarum Nigg]
Length = 804
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/475 (48%), Positives = 308/475 (64%), Gaps = 22/475 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
K Y + I VLEGL+AVR+RP MYIG TG GLHHLVYE++DN++DEA AG+ + + V +
Sbjct: 6 KKYDASAITVLEGLQAVRERPGMYIGDTGVTGLHHLVYEVVDNSIDEAMAGFCTEVVVRI 65
Query: 135 LADNSVSVADNGRGIPIDLHPATNK------SALETVLTVLHAGGKFGGSSSGYSVSGGL 188
L D +SV+DNGRGIP+ +H + SALE VLTVLHAGGKF S Y VSGGL
Sbjct: 66 LEDGGISVSDNGRGIPVQIHEKESAKQGREISALEVVLTVLHAGGKFDKDS--YKVSGGL 123
Query: 189 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 248
HGVG+S VNALSE V++DG Y ++S+G P+T L + S D++GT I F+P
Sbjct: 124 HGVGVSCVNALSEKFIANVFKDGQAYSMEFSKGAPLTALQV----LGSTDKRGTEILFYP 179
Query: 249 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQ 308
D VF+T + FD + R+RELAFLN +TI ++D D ++ +F+ GG++ +V
Sbjct: 180 DPTVFSTCV-FDRAILMKRLRELAFLNRGITIIF-EDDRDAGFDKVT-FFYEGGIQSFVS 236
Query: 309 WLNTDKKPLHD----VVGFRKDVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
+LN +K+ L + G ++ DG I + ALQW S YS+ + YAN+I T GGTH+
Sbjct: 237 YLNQNKESLFPTPIYIQGSKRGDDGDIEFEAALQWNS-GYSELIYSYANNIPTRQGGTHL 295
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
G +LTR +NS K K +SL+GE +REGL I+SV+VPNP+FEGQTK +LGN
Sbjct: 296 TGFSTALTRAVNSYIKSHNLAKSDKLSLTGEDIREGLVAIVSVKVPNPQFEGQTKQKLGN 355
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
+V V Q E LT + E +P + +I+ K A +A AAKRAR+L +KS L S+
Sbjct: 356 SDVGSVAQQISGEVLTTFFEENPQIAKTIVDKVFVAAQAREAAKRARELTIRKSALDSAR 415
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKL DC PE+ E++IVEGDSAGGSAKQGRDRRFQ I+ P++ I A
Sbjct: 416 LPGKLVDCLEKDPEKCEMYIVEGDSAGGSAKQGRDRRFQAIL-PIRGKILNVEKA 469
>gi|159035681|ref|YP_001534934.1| DNA gyrase subunit B [Salinispora arenicola CNS-205]
gi|157914516|gb|ABV95943.1| DNA gyrase, B subunit [Salinispora arenicola CNS-205]
Length = 648
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 234/469 (49%), Positives = 314/469 (66%), Gaps = 17/469 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ YG+E I VLEGLEAVRKRP MYIGSTG RGLHHLV+E++DNAVDEA AGY I+V L
Sbjct: 7 QEYGAESITVLEGLEAVRKRPGMYIGSTGERGLHHLVWEVVDNAVDEALAGYCDTIDVVL 66
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
LAD V V DNGRG P+D HP K +E LTVLHAGGKF G + Y+VSGGLHGVG+S
Sbjct: 67 LADGGVRVTDNGRGFPVDPHPKLKKPGVEVALTVLHAGGKFDGKA--YAVSGGLHGVGVS 124
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS + V + +DG + Q Y+ KP + + D G+ + FWPD VF
Sbjct: 125 VVNALSTRMAVEIQKDGYFWRQSYTDSKP-----SPLEKGEPTDATGSAVSFWPDPAVFE 179
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKE----DSDPEKNQYNEYFFAGGLEEYVQWL 310
T + FD TI R++E+AFLN LTI E D D + + + + GG+ ++V+ L
Sbjct: 180 T-VDFDFQTIYRRLQEMAFLNRGLTIHFLDERVAADEDGKMREVT-FCYKGGIADFVRHL 237
Query: 311 NTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
N K P+H VV F + DG+++++A+QW +++Y +++ +AN+I T +GGTH EG +A+
Sbjct: 238 NASKTPIHKSVVEFGTEEDGMSVEIAMQW-NESYGESVYTFANNINTHEGGTHEEGFRAA 296
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
LT +N G + +K D LSGE +REGL IISV++ NP+FEGQTKT+LGN V+
Sbjct: 297 LTSVINRYGADKRLLK-SDEKLSGEDIREGLAAIISVKLTNPQFEGQTKTKLGNTPVKSF 355
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
V + E+L ++L+ +P I++K+ A +A +AA++AR L R+KS+L S S+PGKLA
Sbjct: 356 VQRVCNEWLVDWLDRNPAEAKVIITKASQAARARVAAQQARKLARRKSLLESGSMPGKLA 415
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
DC ST P E E+FIVEGDSAGGSAKQGRD R Q I+ P++ I A
Sbjct: 416 DCQSTDPRECEVFIVEGDSAGGSAKQGRDPRTQAIL-PIRGKILNVEKA 463
>gi|329964535|ref|ZP_08301589.1| DNA gyrase, B subunit [Bacteroides fluxus YIT 12057]
gi|328524935|gb|EGF51987.1| DNA gyrase, B subunit [Bacteroides fluxus YIT 12057]
Length = 657
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/475 (47%), Positives = 309/475 (65%), Gaps = 26/475 (5%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG GLHHLVYE++DN++DEA AGY +IEV +
Sbjct: 12 NYSASNIQVLEGLEAVRKRPAMYIGDISENGLHHLVYEVVDNSIDEAMAGYCDHIEVTIN 71
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+D H KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 72 EDNSITVQDNGRGIPVDFHEKEQKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 129
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTL----TCHVLPVDSKDRQGTRIRFWPDKQ 251
VNALS+ + V+R+G Y Q+Y GKP+ + TC GT+ FWPD
Sbjct: 130 VNALSKHMTTQVFRNGKIYQQEYECGKPLYAVKEVGTC------DPGFSGTKQTFWPDDS 183
Query: 252 VFTTAIQFDHNTIAGRIRELAFLNPKLTIAL-----RKEDSDPEKNQYNEYFFAGGLEEY 306
+FT + ++ + T+ R+RELA+LN +TI L + E+ +P Q ++ G++E+
Sbjct: 184 IFTVS-EYKYTTLQARLRELAYLNKGITITLTDLRSKDEEGNP---QVEKFHSEEGVKEF 239
Query: 307 VQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 365
V++LN++ PL DV+ + G+ I+ A+ + + Y + + Y N+I T +GGTH G
Sbjct: 240 VRYLNSNNNPLFDDVIYLNTEKAGVPIECAIMY-NTGYRENLHSYVNNINTKEGGTHEGG 298
Query: 366 VKASLTRTLNSLGKKS--KTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
+A+LTR L G+ + K ++ + +SGE REGL +ISV+V P+FEGQTKT+LGN
Sbjct: 299 FRAALTRVLKKYGEDTCAKQLEKAKVEISGEDFREGLIAVISVKVAEPQFEGQTKTKLGN 358
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
EV V+Q+V E L+ YLE HP I+ K + A A +AA++AR+ V++KS +
Sbjct: 359 SEVSGAVNQAVGEALSYYLEEHPKEAKLIVEKVILAATARVAARKARESVQRKSPMSGGG 418
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
+PGKLADCSS PEE E+F+VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 419 MPGKLADCSSKDPEECELFLVEGDSAGGSAKQGRNRAFQAIL-PLRGKILNVEKA 472
>gi|297616219|ref|YP_003701378.1| DNA gyrase subunit beta [Syntrophothermus lipocalidus DSM 12680]
gi|297144056|gb|ADI00813.1| DNA gyrase, B subunit [Syntrophothermus lipocalidus DSM 12680]
Length = 636
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/469 (49%), Positives = 320/469 (68%), Gaps = 14/469 (2%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
N Y + IQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGY I
Sbjct: 4 NGSKNEYTALDIQVLEGLEAVRKRPGMYIGSTDSRGLHHLVFEIVDNSIDEAVAGYCDEI 63
Query: 131 EVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHG 190
+V +L D++V+V DNGRGIP+D+HP ALE +LT LH+G KFGGS GY++SGGLHG
Sbjct: 64 KVIILDDSTVTVTDNGRGIPVDMHPKMGIPALEVILTTLHSGAKFGGS--GYTISGGLHG 121
Query: 191 VGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDK 250
VGLSVVNALS LEV V RDG YHQ+Y RGKPVT L + GT+I F PD
Sbjct: 122 VGLSVVNALSRWLEVEVARDGQLYHQRYERGKPVTPLAV----TGACQTTGTKITFSPDP 177
Query: 251 QVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWL 310
++F I F I R+REL++LN I L D + EY+ GG+ ++V++L
Sbjct: 178 EIFE-EICFSAEIIGQRLRELSYLNQGTRIVL----CDKRTGRDVEYYHTGGIRDFVKYL 232
Query: 311 NTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
+ +++PL + + FR +G +++A+Q+ + Y++T+L YAN+I T +GGTH G K
Sbjct: 233 SKNREPLSPEPIYFRIGKEGTVVEVAIQYNT-GYTETLLSYANNIHTQEGGTHELGFKNG 291
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
LTR +N KK +K+ + +L GE +REG+T +ISV V +P+FEGQTKT+LGN +R +
Sbjct: 292 LTRVVNEYAKKQGMLKENEGNLLGEDIREGMTAVISVLVQDPQFEGQTKTKLGNAFIRSL 351
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
V+ +V +++ + + +P + I+ K+++A +A AA++AR+L R+K++L S+SLPGKLA
Sbjct: 352 VEGAVSDFVGAFFDENPSLAKKIVEKAIAARRAREAARKARELTRRKNLLDSTSLPGKLA 411
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
DCS P SE+++VEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 412 DCSEKDPALSELYLVEGDSAGGSAKQGRDRNFQAIL-PLRGKILNVEKA 459
>gi|242372598|ref|ZP_04818172.1| DNA gyrase subunit B [Staphylococcus epidermidis M23864:W1]
gi|242349653|gb|EES41254.1| DNA gyrase subunit B [Staphylococcus epidermidis M23864:W1]
Length = 643
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 242/466 (51%), Positives = 315/466 (67%), Gaps = 11/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYADQIEVI 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V+R+ YHQ Y +G P L + D+ GT IRF D +F
Sbjct: 129 SVVNALSQDLEVYVYRNETIYHQAYKKGVPQFDLK----EIGETDQTGTAIRFKADGDIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +++ T+ RIRELAFLN + I LR E + + Y + GG++ YV+ LN +
Sbjct: 185 TETTVYNYETLQQRIRELAFLNKGIQITLRDEREEEVRED--SYHYEGGIKSYVELLNEN 242
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+P+H + + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 243 KEPIHQEPIYIHQTKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 301
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G +SK +K+ LSGE REGLT IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 302 VLNSYGTQSKIIKEDKDRLSGEDTREGLTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 361
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P V I+ K + A +A +AAK+AR++ R+KS L SSLPGKLADCS
Sbjct: 362 LFSEHFERFLYENPSVGRIIVEKGIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCS 421
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P+ESEIF+VEGDSAGGS K GRD R Q I+ PL+ I A
Sbjct: 422 SKNPDESEIFLVEGDSAGGSTKSGRDSRTQAIL-PLRGKILNVEKA 466
>gi|197116406|ref|YP_002136833.1| DNA gyrase subunit B [Geobacter bemidjiensis Bem]
gi|197085766|gb|ACH37037.1| DNA gyrase, B subunit [Geobacter bemidjiensis Bem]
Length = 796
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/463 (48%), Positives = 319/463 (68%), Gaps = 14/463 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+++IQ+LEGLEAVRKRPAMYIGST +GLHHLVYE++DNA+DEA AGY ++V +
Sbjct: 9 YGADKIQILEGLEAVRKRPAMYIGSTAAQGLHHLVYELVDNAIDEALAGYCDAVQVIIHL 68
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV+V DNGRGIP D+HP +SA E VLTVLHAGGKF +S Y VSGGLHGVG SVV
Sbjct: 69 DGSVTVEDNGRGIPTDMHPTEGRSAAEVVLTVLHAGGKFDNTS--YKVSGGLHGVGSSVV 126
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS L++ + R+G + Q Y +G P L R+GT+I F+PD ++F T
Sbjct: 127 NALSTRLDLEIRRNGHVHTQTYRKGVPQAPLEI----TGETKRRGTKITFFPDGEIFETT 182
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+F + ++ R+RELAFLN + I + E ++ + +++F+ GG+ +V++LN +K
Sbjct: 183 -EFSFDVLSKRLRELAFLNAGVRIKIHDERTEKD----HDFFYEGGIRSFVEYLNKNKNL 237
Query: 317 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
++ + + R + G+ I++A+Q+ +D+Y + + +AN+I T +GGTH+ G KASLTRT+N
Sbjct: 238 VNPEPIYIRGEKSGVDIEIAMQY-NDSYDEKVFSFANNINTHEGGTHLVGFKASLTRTMN 296
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+ + +K+ +++SG+ +REGLT +ISV++ P+FEGQTKT+LGN EV+ V+ +
Sbjct: 297 TYATANNLLKNVKVAISGDDLREGLTAVISVKISQPQFEGQTKTKLGNSEVKGYVETLMN 356
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L YLE +P + IL KS+ A +A AA++AR+L R+K L +LPGKLADC
Sbjct: 357 EKLATYLEENPAMARKILEKSIDAARAREAARKARELTRRKGALEVGTLPGKLADCQEKD 416
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P E+F+VEGDSAGGSAKQGRDR++Q I+ PL+ I A
Sbjct: 417 PALCELFLVEGDSAGGSAKQGRDRKYQAIL-PLKGKILNVEKA 458
>gi|340347373|ref|ZP_08670482.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella dentalis
DSM 3688]
gi|433651140|ref|YP_007277519.1| DNA gyrase, B subunit [Prevotella dentalis DSM 3688]
gi|339609465|gb|EGQ14337.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella dentalis
DSM 3688]
gi|433301673|gb|AGB27489.1| DNA gyrase, B subunit [Prevotella dentalis DSM 3688]
Length = 657
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/464 (49%), Positives = 306/464 (65%), Gaps = 15/464 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AG+ +IEV L
Sbjct: 10 NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGFCQDIEVTLN 69
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
D S +V D+GRGIP+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 70 EDGSCTVQDDGRGIPVDEHEKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 127
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS + V+RDG Y Q+Y +GKP+ + + DR+GTR +FWPD +FTT
Sbjct: 128 VNALSSHMLSQVFRDGKIYQQEYEKGKPLYPVKV----IGETDRRGTRQQFWPDAGIFTT 183
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDK 314
F + +A R+RELAFLN + I L + E E F A GL+E+V++++ +
Sbjct: 184 TT-FQWDIVARRMRELAFLNAGIRITLTDLRPNDEGKTRREVFHAKDGLKEFVRYIDRHR 242
Query: 315 KPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
L DV+ + + G+ I++A+ + +D YS+ + Y N+I TI+GGTH+ G + +LTR
Sbjct: 243 THLFDDVIYLKTEKQGLPIEVAIMYNTD-YSENLHSYVNNINTIEGGTHVTGFRMALTRV 301
Query: 374 LNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
L + SK ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 302 LKNYADNDAQISKQIEKAKIEVAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGA 361
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
V+Q+V E LT YLE HP I K + A A +AA++AR+ V++KSV+ LPGKLA
Sbjct: 362 VNQAVGEALTNYLEEHPVEAKQICEKVILAATARVAARKARESVQRKSVMSGGGLPGKLA 421
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
DCS+ P++ EIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 422 DCSNKDPKQCEIFLVEGDSAGGSAKQGRDRYTQAIL-PLRGKIL 464
>gi|257127028|ref|YP_003165142.1| DNA gyrase subunit beta [Leptotrichia buccalis C-1013-b]
gi|257050967|gb|ACV40151.1| DNA gyrase, B subunit [Leptotrichia buccalis C-1013-b]
Length = 660
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/485 (47%), Positives = 311/485 (64%), Gaps = 33/485 (6%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ YG+E I VLEGLEAVRKRP MYIGST RGLHHLV+EI+DN+VDEA AG I V
Sbjct: 1 MDNNYGAEAITVLEGLEAVRKRPGMYIGSTSSRGLHHLVWEIVDNSVDEALAGICDKITV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+L N + V+DNGRGIP+ +H T KS LE VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 KILEGNIIEVSDNGRGIPVGMHK-TGKSTLEVVLTVLHAGGKF--DNDNYKVSGGLHGVG 117
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE LE TV RDG + Q Y RG P T + V GT +RF D ++
Sbjct: 118 VSVVNALSEWLEATVTRDGKIFRQTYERGVP--TSPVEEIGVADDSAHGTVVRFKADDEI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F T + +D++ + R++ELA+LN L I L E + E + E+ F GG+++++ +
Sbjct: 176 FETTV-YDYSVLESRLKELAYLNKGLKIELADE-RNAENVKAEEFLFEGGIKDFLNEIID 233
Query: 313 DKKPLHDVVGFR--------KDVDG----------------ITIDLALQWCSDAYSDTML 348
++K + DV+ K+V+ + +++A+ + + + +T+
Sbjct: 234 EEKIIDDVIYMADTMQIEEAKEVEAEDENGNIVIKQRSAKFVEVEIAMNYTT-SQRETVY 292
Query: 349 GYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRV 408
+ N+I T +GGTH+ G + +LTRT+N + K+ +KDK+ + G VREGL C+ISV++
Sbjct: 293 SFVNNINTHEGGTHVSGFRTALTRTINDIAKQMNLIKDKNGTFQGTDVREGLVCVISVKI 352
Query: 409 PNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKR 468
P P+FEGQTKT+LGN EV +V V L YLE HP + ++ K + + +A AAK+
Sbjct: 353 PEPQFEGQTKTKLGNSEVTGIVSNIVGSNLKFYLEDHPKAAEKVIEKMVMSKRAREAAKK 412
Query: 469 ARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPL 528
AR+LV +K+ L SLPGKLADCSS P ESEIFIVEG+SAGGSAKQGRDRRFQ I+ PL
Sbjct: 413 ARELVLRKNTLEVGSLPGKLADCSSKDPAESEIFIVEGNSAGGSAKQGRDRRFQAIL-PL 471
Query: 529 QESIF 533
+ I
Sbjct: 472 RGKIL 476
>gi|23978272|dbj|BAC21122.1| DNA gyrase B subunit [Pleurocapsa sp. PCC 7314]
Length = 393
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/398 (54%), Positives = 292/398 (73%), Gaps = 6/398 (1%)
Query: 102 TGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSA 161
TGP+GLHHLVYE++DN++DEA AG+ ++IEV + D S++V D+GRGIP +H T KSA
Sbjct: 1 TGPKGLHHLVYEVVDNSIDEALAGFCTHIEVDINPDGSITVTDDGRGIPTGIHHKTGKSA 60
Query: 162 LETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG 221
LETV+TVLHAGGKFG GY VSGGLHGVG+SVVNALS+ +EVTVWRD + Q+Y RG
Sbjct: 61 LETVMTVLHAGGKFG--DGGYKVSGGLHGVGVSVVNALSKLVEVTVWRDKKIHLQRYERG 118
Query: 222 KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIA 281
KP L D K R GT + F PD+ +FT F++ +A R++ELA+LN + I
Sbjct: 119 KPQGKLATDPNKDDPK-RTGTSVHFVPDETIFTETTVFEYEILAKRLKELAYLNAGIKIT 177
Query: 282 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCS 340
D+ E+ + + + GG++EYV+++ +K PLH D++ K+ G+T+++ALQWC
Sbjct: 178 FT--DNRSEEIHQDIFCYEGGIKEYVEYMTPEKDPLHQDIIYVNKEKKGVTVEVALQWCI 235
Query: 341 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 400
D+YSD +LG+AN+IRTIDGGTH+EG+K LTRT+NS +K +KD + +L GE+VREGL
Sbjct: 236 DSYSDNLLGFANNIRTIDGGTHLEGLKTVLTRTMNSFARKRNKIKDNESNLGGENVREGL 295
Query: 401 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 460
T ++SV+VP+PEFEGQTKT+LGN EVR +VD V E L +YLE + V D+I+ K+L +
Sbjct: 296 TGVVSVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLNDYLEFNLSVGDAIIDKALESF 355
Query: 461 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEE 498
AA AA+ AR+LVR+KSVL SS LPGKL+DCSS PEE
Sbjct: 356 XAAEAARHARELVRRKSVLESSPLPGKLSDCSSRDPEE 393
>gi|164686442|ref|ZP_02210470.1| hypothetical protein CLOBAR_00007 [Clostridium bartlettii DSM
16795]
gi|164604453|gb|EDQ97918.1| DNA gyrase, B subunit [Clostridium bartlettii DSM 16795]
Length = 633
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 240/462 (51%), Positives = 318/462 (68%), Gaps = 12/462 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ QIQVLEGLEAVR RP MYIGSTGPRGLHHLVYEI+DN++DEA GY I V
Sbjct: 1 MKQEYGANQIQVLEGLEAVRLRPGMYIGSTGPRGLHHLVYEIVDNSIDEALQGYCDRIYV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ D SV+ D+GRGIP++ HP T KS LETVLT+LHAGGKFGG S LHGVG
Sbjct: 61 CINEDGSVTTKDDGRGIPVETHPKTGKSTLETVLTILHAGGKFGGGGYKVSGG--LHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVN LSE L V+R+G Y Q Y +G + L V D GT I+F PD +
Sbjct: 119 ISVVNGLSEWLVAEVYRNGKIYRQSYKKGITDSELEI----VGESDHTGTIIQFMPDATI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F I FD+ T+ R+RELAFLN + I ED P + Q E+ + GG+ E+V++LN+
Sbjct: 175 FDD-IVFDYKTLETRLRELAFLNKGVRIVF--EDKRPGQEQKKEFLYDGGIREFVEYLNS 231
Query: 313 DKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
K P+H+ VV K + +++A+Q+ +D YS+ +L +AN+I T +GG H+ G KA+LT
Sbjct: 232 TKTPIHENVVYIDKKIQDCMVEIAIQY-TDGYSENILSFANNIDTHEGGAHLAGFKAALT 290
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
+T+N K++K +K+ D +LSGE +REGLT ++SV++P+P+FEGQTKT+LGN +R +VD
Sbjct: 291 KTVNEYAKRNKLLKENDANLSGEDIREGLTAVVSVKLPDPQFEGQTKTKLGNTRMRGIVD 350
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
E L +LE +P I+ K+L A +A AAKRAR+L R+K+VL S+SLPGKLADC
Sbjct: 351 AVTVEELGAFLEENPQTSRIIVDKALRAQRAREAAKRARELTRRKTVLESTSLPGKLADC 410
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
+ P +SEIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 411 AEKDPAKSEIFLVEGDSAGGSAKQGRDRYTQAIL-PLRGKIL 451
>gi|261878836|ref|ZP_06005263.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella bergensis
DSM 17361]
gi|270334578|gb|EFA45364.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella bergensis
DSM 17361]
Length = 657
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/465 (48%), Positives = 308/465 (66%), Gaps = 15/465 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY +IEV +
Sbjct: 9 ENYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCDHIEVTI 68
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DNS +V DNGRGIP+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 69 NEDNSCTVEDNGRGIPVDQHEKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVS 126
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VNALS + V+RDG Y Q+Y +GKP+ + + + D++GTR +FWPD +FT
Sbjct: 127 CVNALSARMLSQVFRDGKAYQQEYEKGKPLYPVKV----IGNTDKRGTRQQFWPDPTIFT 182
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTD 313
T F + +A R+RELA+LN + I L + + E F A GL+E+V++++
Sbjct: 183 TRT-FQWDIVARRMRELAYLNAGIKITLTDLRPNEDGKIRQEVFHAKDGLKEFVRYIDRH 241
Query: 314 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
+ L DV+ + + G+ I++A+ + +D YS+ + Y N+I TI+GGTH+ G + +LTR
Sbjct: 242 RTHLFDDVIYLKTEKQGVPIEVAIMYNTD-YSENLHSYVNNINTIEGGTHVTGFRQALTR 300
Query: 373 TLNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
L + +K ++ + ++GE REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 301 VLKNYADNDPQIAKQIEKAKVEIAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVTG 360
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
V+Q+V E LT YLE HP I K + A A +AA++AR+ V++KSV+ LPGKL
Sbjct: 361 AVNQAVGEALTNYLEEHPTEAKQICEKVVLAATARVAARKARESVQRKSVMTGGGLPGKL 420
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
ADCS+ P+ EIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 421 ADCSNKDPKLCEIFLVEGDSAGGSAKQGRDRYTQAIL-PLRGKIL 464
>gi|195953991|ref|YP_002122281.1| DNA gyrase subunit B [Hydrogenobaculum sp. Y04AAS1]
gi|195933603|gb|ACG58303.1| DNA gyrase, B subunit [Hydrogenobaculum sp. Y04AAS1]
Length = 786
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/464 (48%), Positives = 308/464 (66%), Gaps = 16/464 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG + I+V+ GLE VR RP+MYIG RGLHHL++EI+DN+VDEA AGYA++I V +
Sbjct: 4 YGVDAIKVVTGLEHVRLRPSMYIGDISERGLHHLIWEIVDNSVDEAMAGYATHIRVHIHQ 63
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D+S++V DNGRGIP+ +H K A+E VLTVL AGGKF Y SGGLHGVG SVV
Sbjct: 64 DDSITVEDNGRGIPVYIHKDVGKPAVEVVLTVLGAGGKF--DKKAYQYSGGLHGVGASVV 121
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TT 255
NALSE L V V+RDG Y Q+Y RG P T L + ++GT+I F PD ++F TT
Sbjct: 122 NALSEWLIVEVYRDGKIYRQEYERGVPKTELQV----IGDTTKRGTKITFKPDAEIFETT 177
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
I+FD + RIRELA+LN +T + D +++ Y F G+ E ++L K+
Sbjct: 178 KIKFD--IVEKRIRELAYLNKNVTFEI----IDDRLDKHLVYKFERGIIELAEYLAEGKE 231
Query: 316 PL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
PL +DV+ DG +++A ++ D Y +++ + N+I+TI+GGTH+ G +++L++ +
Sbjct: 232 PLFNDVIYIESGKDGTLVEIAFKYTKD-YKESLESFVNNIKTIEGGTHVTGFRSALSKVV 290
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
+ L + K K+ +GE +REGL ++S +VP P+FEGQTKT+LGN E + +V+
Sbjct: 291 SKLSQNIKISKELKEMFTGEDLREGLVAVVSCKVPEPQFEGQTKTKLGNQETKNIVESIT 350
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E+LT+Y E H D+L I+ K++ A A AAK+A+DLVR+KS L +SLPGKLADCS
Sbjct: 351 VEFLTDYFEKHQDILKLIVEKAIEAALAREAAKKAKDLVRRKSFLEDTSLPGKLADCSEK 410
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P + EIFIVEG+SAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 411 DPSKCEIFIVEGESAGGSAKQGRDRRFQAIL-PLKGKILNVEKA 453
>gi|294849833|ref|ZP_06790573.1| hypothetical protein SKAG_01922 [Staphylococcus aureus A9754]
gi|294823381|gb|EFG39810.1| hypothetical protein SKAG_01922 [Staphylococcus aureus A9754]
Length = 644
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 244/466 (52%), Positives = 321/466 (68%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V R+ YHQ Y +G P L VD+ D+ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVDTTDKTGTVIRFKADGEIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +++ T+ RIRELAFLN + I LR E D E + + Y + GG++ YV+ LN +
Sbjct: 185 TETTVYNYETLQQRIRELAFLNKGIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNEN 243
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 302
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G SK +K++ LSGE REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 303 VLNSYGLSSKIMKEEKDRLSGEDTREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 362
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P V +++ K + A +A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAREVTRRKSALDVASLPGKLADCS 422
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S +PEE EIF+VEGDSAGGS K GRD R Q I+ PL+ I A
Sbjct: 423 SKSPEECEIFLVEGDSAGGSTKSGRDSRTQAIL-PLRGKILNVEKA 467
>gi|363896924|ref|ZP_09323472.1| DNA gyrase, B subunit [Oribacterium sp. ACB7]
gi|361960112|gb|EHL13370.1| DNA gyrase, B subunit [Oribacterium sp. ACB7]
Length = 652
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/466 (49%), Positives = 317/466 (68%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
SK YG++QIQ+LEGLEAVRKRP MYIGST RGLHHLVYEI+DN+VDEA AG+ NI V
Sbjct: 17 SKEYGADQIQILEGLEAVRKRPGMYIGSTSVRGLHHLVYEIVDNSVDEALAGFCDNITVT 76
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++V D+GRGIP+D+ KSALE V TVLHAGGKFGGS GY VSGGLHGVG
Sbjct: 77 IHKDNSITVEDDGRGIPVDIQKKAGKSALEVVFTVLHAGGKFGGS--GYKVSGGLHGVGA 134
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS L+VTV +DG Y +S+GK + + C + +++ GT++ F PD ++F
Sbjct: 135 SVVNALSSFLDVTVCKDGKIYTMSFSKGKVIKEIEC--IGTCTEEEHGTKVHFLPDSEIF 192
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
+I +D +T+ R+RE AFL L I L D E+ + + + GG++E+V +LN
Sbjct: 193 EESI-YDFDTLKVRLRETAFLTKNLRIKLV--DEREEETREMTFHYEGGIKEFVTYLNKG 249
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L+ DV+ + + I +++A+Q +D+Y++ + + N+I T +GGTH+ G K +LT+
Sbjct: 250 KEALYPDVIYCEGEKEHILVEVAMQH-NDSYTENIYTFVNNINTPEGGTHLTGFKNALTK 308
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
T N +++K +KD + +LSGE +REGLTCIISV++ +P+FEGQTK +LG E + V
Sbjct: 309 TFNDYARQNKLLKDSEPNLSGEDIREGLTCIISVKIEDPQFEGQTKQKLGTSEAQVAVQG 368
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
V E LT +LE +P V + KS+ A +A AA++ARDL R+KS L LPGKLADCS
Sbjct: 369 IVSEQLTYFLEQNPAVARVMCEKSIMAQRARAAARKARDLTRRKSALDGVGLPGKLADCS 428
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S E EIFIVEGDSA G AK+GR+ Q ++ PL+ + A
Sbjct: 429 SKDAERCEIFIVEGDSALGPAKEGRNPETQAVL-PLRGKVLNVQKA 473
>gi|283953662|ref|ZP_06371193.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 414]
gi|283794703|gb|EFC33441.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 414]
Length = 769
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/466 (46%), Positives = 309/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ ++V
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTVDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDIHPTENIPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD Q+
Sbjct: 119 VSVVNALSKKLVATVERNGKIYRQEFSEGKIISEFGV----IGKSKKTGTTIEFWPDDQI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +F++ + R RELA+LNPK+TI + D ++ + F GG+ ++V LN
Sbjct: 175 FEMT-EFNYEILVKRFRELAYLNPKITINFK----DNRIGKHESFHFEGGISQFVTDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKAIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++GE VREGL ++SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDNKITGEDVREGLIAVVSVKVPEPQFEGQTKGKLGSTYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYL++Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLSKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|334135652|ref|ZP_08509135.1| DNA gyrase, B subunit [Paenibacillus sp. HGF7]
gi|333606847|gb|EGL18178.1| DNA gyrase, B subunit [Paenibacillus sp. HGF7]
Length = 638
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 234/467 (50%), Positives = 317/467 (67%), Gaps = 17/467 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y QIQVLEGLEAVRKRP MYIGST RGLHHLV+E++DN++DEA AGY + I+V +
Sbjct: 7 SYDENQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVWEVVDNSIDEALAGYCTRIDVIVH 66
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DN ++V DNGRGIP+ H + ALE VLTVLHAGGKFGG SGY VSGGLHGVG+SV
Sbjct: 67 KDNRITVIDNGRGIPVGEHAKMKRPALEVVLTVLHAGGKFGGDDSGYKVSGGLHGVGISV 126
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS L V V G + Q+Y +GKP L + + GT + F PD ++FT
Sbjct: 127 VNALSSHLLVRVKLHGKIHEQEYRQGKPQYDLRI----IGETEETGTTVTFTPDPEIFTE 182
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
++++ + RIRELAFLN + I L E +D ++ + + GG++ +V+ LN +K+
Sbjct: 183 TTEYEYEILQSRIRELAFLNKGIEINLIDERTDTSES----FMYEGGIKSFVEHLNRNKE 238
Query: 316 PLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
LH V G +++ I +++A+Q+ +D+Y++ + +AN+I T +GGTH G K++LT
Sbjct: 239 ALHQPPIYVEGSKEN---IQVEVAIQY-NDSYTENIYSFANNINTHEGGTHESGFKSALT 294
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R LN +K+ +K+ +LSG+ VREGL IISV++P P+FEGQTKT+LGN EVR +VD
Sbjct: 295 RILNDYARKTNAIKESGSNLSGDDVREGLAAIISVKIPEPQFEGQTKTKLGNSEVRGIVD 354
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
E L E+L+ +P + I+ K L A +A AA++AR+L R+KSVL SSLPGKLADC
Sbjct: 355 SLFAEKLLEFLDENPAIAKKIVEKGLQASRAREAARKARELTRRKSVLEVSSLPGKLADC 414
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SS SE++IVEGDSAGGSAKQGRDR FQ I+ P++ I A
Sbjct: 415 SSKDASISELYIVEGDSAGGSAKQGRDRHFQAIL-PIRGKILNVEKA 460
>gi|294508443|ref|YP_003572501.1| DNA gyrase subunit B [Salinibacter ruber M8]
gi|294344771|emb|CBH25549.1| DNA gyrase subunit B [Salinibacter ruber M8]
Length = 698
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/463 (49%), Positives = 307/463 (66%), Gaps = 7/463 (1%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRP+MYIG G RGLHHLVYE+LDN++DEA AG+ I V +
Sbjct: 61 YAASNIQVLEGLEAVRKRPSMYIGDVGLRGLHHLVYEVLDNSIDEAMAGHCDEIGVEIYE 120
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVS+ DNGRGIP+D HPA ++SALE V+TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 121 DGSVSIEDNGRGIPVDQHPAEDRSALEVVMTVLHAGGKFDKDS--YQVSGGLHGVGVSVV 178
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NAL+ EVTVWRDG + Q Y G P + V P+++ + GTRIRFWPD +F T
Sbjct: 179 NALASRFEVTVWRDGSVWEQNYLCGVPEDPVR-RVRPMEAGEETGTRIRFWPDGDIFKTT 237
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+F T++ R+RELAFLN + I + + E Y G+ +V +L+ +
Sbjct: 238 -EFRFETLSDRLRELAFLNAGVRIRVEDHREEDEGLARETYHSEEGIIGFVDYLDEARDS 296
Query: 317 LHDVVGFRKDVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
+ D + + DG + ++LA+Q+ +D Y+ +L + N+I T +GGTH+ G + +LTRTL
Sbjct: 297 ILDETIYIAETDGEVPVELAMQY-NDEYNKNVLSFVNNINTHEGGTHVTGFRRALTRTLK 355
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+K+ + D LSG+ REGLT ++SV+V P+FEGQTKT+LGN +V+ +V+ +
Sbjct: 356 RYAQKNDMLSDLKFDLSGDDFREGLTAVLSVKVSEPQFEGQTKTKLGNSDVQGIVESLIN 415
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
L +LE HPD + I+ K + A +A AA++AR+LV++K SLPGKLADCSS
Sbjct: 416 TELGRWLEDHPDQAERIIEKVIQAAEARAAARKARELVQRKDAFSGGSLPGKLADCSSRD 475
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PEE E+++VEGDSAGGSAKQ RDR FQ I+ PL+ I A
Sbjct: 476 PEEGELYLVEGDSAGGSAKQARDRHFQAIL-PLRGKILNVEKA 517
>gi|410666391|ref|YP_006918762.1| DNA gyrase subunit beta [Thermacetogenium phaeum DSM 12270]
gi|409104138|gb|AFV10263.1| DNA gyrase subunit beta [Thermacetogenium phaeum DSM 12270]
Length = 642
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/460 (50%), Positives = 312/460 (67%), Gaps = 14/460 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y + QI+VLEG+EAVR+RP MYIG+TG RGLH LV+E++DN+VDE AGY IE+ L
Sbjct: 14 RDYDAAQIEVLEGMEAVRRRPGMYIGNTGARGLHQLVFELIDNSVDEHLAGYCDLIEITL 73
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
D SV+V DNGRGIP+D+HP T + A+E LT+LHAGGKFGG+ GY +SGGLHGVGLS
Sbjct: 74 HRDGSVTVRDNGRGIPVDIHPRTGRPAVEAALTMLHAGGKFGGN--GYEISGGLHGVGLS 131
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS L V V RDG Y Q+Y RG+ + L + + GT +RF PD Q+F+
Sbjct: 132 VVNALSRWLLVEVRRDGRRYQQRYERGQVKSPLK----DAGAAEGTGTTVRFLPDGQIFS 187
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
+F+ I R+R+L++LN L L D E++ GG+ ++V+ LN +K
Sbjct: 188 ER-KFNREYITARVRDLSYLNKGLRFVL----VDEVTGDRQEFYHEGGIADFVRSLNKNK 242
Query: 315 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+ LH D + F DG+ I++ALQ+ + Y++ + Y N+I T +GGTH G KA+LTR
Sbjct: 243 EVLHQDPLYFSDKKDGVVIEVALQYHT-GYTEGIYSYVNNIHTQEGGTHEAGFKAALTRI 301
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N KKS +K+ LSGE REGLT ++SV++ P+FEGQTKT+LGN EVR +V+
Sbjct: 302 INDYAKKSGYLKENMEKLSGEDTREGLTAVLSVKLKEPQFEGQTKTKLGNSEVRGIVESV 361
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
V E+L E+ E +P I+ K++ A +A AA++AR+L R+K+ L SLPGKLADC+S
Sbjct: 362 VSEHLEEFFEENPGPSKLIVEKAVQAARAREAARKARELTRRKTALDHISLPGKLADCTS 421
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P E E++IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 422 KDPRECELYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKII 460
>gi|334338619|ref|YP_004543599.1| DNA gyrase subunit B [Desulfotomaculum ruminis DSM 2154]
gi|334089973|gb|AEG58313.1| DNA gyrase, B subunit [Desulfotomaculum ruminis DSM 2154]
Length = 639
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 242/463 (52%), Positives = 321/463 (69%), Gaps = 12/463 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++QIQVLEGLEAVR+RP MYIGST RGLHHLVYE++DN++DEA AGY S IEV +
Sbjct: 11 YSADQIQVLEGLEAVRRRPGMYIGSTSARGLHHLVYEVVDNSIDEALAGYCSRIEVIIHK 70
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNSV+V D+GRGIP+ + K A+E VLT+LHAGGKFGG VSGGLHGVG+SVV
Sbjct: 71 DNSVTVEDDGRGIPVGIQSKVGKPAVEVVLTMLHAGGKFGGGGY--KVSGGLHGVGVSVV 128
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS LEV + DG Y+QKYSRG PVT L + GT+I F PD+++F
Sbjct: 129 NALSSELEVEIKLDGNLYYQKYSRGIPVTELKI----IGKSKSTGTKITFKPDEEIFEEL 184
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+ F TI+ R+RELA+LN + I LR E + E Q +Y GG++++V+ LN +K+
Sbjct: 185 V-FSLETISQRMRELAYLNKGIKIILRDERKETENEQVFQY--EGGIQDFVKHLNRNKQV 241
Query: 317 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LH + + + +++++A+Q+ +D+YS+TML YAN+I T +GGTH G K +LTR +N
Sbjct: 242 LHAKPIYLSGEKEYVSVEIAMQY-NDSYSETMLSYANNIHTTEGGTHEVGFKTALTRIIN 300
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
G+ +K+ D +L GE +REG T +ISV+VP P+FEGQTKT+LGN EVR +VD
Sbjct: 301 DYGRTHNILKNNDPNLIGEDIREGATIVISVKVPEPQFEGQTKTKLGNSEVRGIVDSIFS 360
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L+ YLE +P V I+ K ++A +A AA++AR+L R+KS L + SLPGKLADCS
Sbjct: 361 EALSTYLEENPSVAKKIIEKGVTASRAREAARKARELTRRKSALETMSLPGKLADCSEKD 420
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P E+++VEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 421 PSLCELYLVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNVEKA 462
>gi|297570618|ref|YP_003696392.1| DNA gyrase subunit beta [Arcanobacterium haemolyticum DSM 20595]
gi|296930965|gb|ADH91773.1| DNA gyrase, B subunit [Arcanobacterium haemolyticum DSM 20595]
Length = 682
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/482 (47%), Positives = 310/482 (64%), Gaps = 29/482 (6%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + I VLEGLEAVRKRP MYIGSTG RGLHHLVYE++DN+VDEA AGYAS I V LL
Sbjct: 24 YNASNITVLEGLEAVRKRPGMYIGSTGERGLHHLVYEVVDNSVDEALAGYASEITVTLLD 83
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
+ V V D+GRGIP+D+HP +A++ V+TVLHAGGKFG S Y+VSGGLHGVG+SVV
Sbjct: 84 NGGVKVEDDGRGIPVDIHPTEGVAAVQVVMTVLHAGGKFGNGS--YAVSGGLHGVGISVV 141
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS ++ V RDG + Y G PV L + D+ GT FWP+ +F T
Sbjct: 142 NALSTRMDTEVRRDGYVWRISYENGVPVAPLEQG----EPTDKTGTTQTFWPNADIFET- 196
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKE---------------DSDPEKNQYNEYFFAG 301
++FD +T+ R ++AFLN L I L E D+ K+ Y +
Sbjct: 197 VEFDFDTLRQRFHQMAFLNKSLKITLIDERETAVVEGDEVTGEDDATETKHTQVTYQYDN 256
Query: 302 GLEEYVQWLNTDKK--PLHDVVGFRKDVDG---ITIDLALQWCSDAYSDTMLGYANSIRT 356
GL +YV L KK P+H+ + + D I++++A+QW ++AYS+++ +AN+I T
Sbjct: 257 GLHDYVTHLIKTKKSEPVHEHPIYFEAEDKERVISVEVAMQW-TNAYSESLHTFANTINT 315
Query: 357 IDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQ 416
+GGTH EG + +LT +N + +K+KD +L+G+ +REGLT +ISV++ P+FEGQ
Sbjct: 316 TEGGTHEEGFRTALTSIINKYARDKAILKEKDANLTGDDIREGLTAVISVKLGEPQFEGQ 375
Query: 417 TKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQK 476
TKT+LGN E R V Q+ LT++L++HP I+ K++ A A LAA++AR+ R+K
Sbjct: 376 TKTKLGNTEARTFVQQTTYAQLTDWLDMHPSEGKEIIRKAMQAQTARLAARKAREATRRK 435
Query: 477 SVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFA 536
SVL S+++PGKL DC+S PEE EIFIVEGDSAGGSA GRD Q I+ P++ I
Sbjct: 436 SVLESAAMPGKLKDCTSRKPEECEIFIVEGDSAGGSAVNGRDPNHQAIM-PIRGKILNVE 494
Query: 537 SA 538
A
Sbjct: 495 KA 496
>gi|443287921|ref|ZP_21027016.1| DNA gyrase subunit B [Micromonospora lupini str. Lupac 08]
gi|385882008|emb|CCH22109.1| DNA gyrase subunit B [Micromonospora lupini str. Lupac 08]
Length = 648
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/468 (49%), Positives = 317/468 (67%), Gaps = 15/468 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ YG+E I VLEGLEAVRKRP MYIGSTG RGLHHLV+E++DNAVDEA AGY I+V L
Sbjct: 7 QEYGAESITVLEGLEAVRKRPGMYIGSTGERGLHHLVWEVVDNAVDEALAGYCDTIDVVL 66
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
LAD V V DNGRG P+DLHP K +E LT+LHAGGKF G + Y+VSGGLHGVG+S
Sbjct: 67 LADGGVRVTDNGRGFPVDLHPKLKKPGVEVALTILHAGGKFDGKA--YAVSGGLHGVGVS 124
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS + V + + G + Q Y+ KP + ++ DR G+ + FWPD VF
Sbjct: 125 VVNALSTKMFVEIHKSGSVWRQHYTNSKP-----SPLEKGETTDRTGSAVSFWPDPDVFE 179
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKED-SDPEKNQYNE--YFFAGGLEEYVQWLN 311
T + FD TI R++E+AFLN L I L E ++ E + E +++ GG+ ++V+ LN
Sbjct: 180 T-VDFDFQTIYRRLQEMAFLNRALRIHLLDERVAEEEDGRQREVTFYYEGGIADFVRHLN 238
Query: 312 TDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 370
K P+H VV F + +G+++++A+QW +++Y +++ +AN+I T +GGTH EG +++L
Sbjct: 239 ASKNPIHKTVVEFGAEEEGMSLEIAMQW-NESYGESVYTFANTINTHEGGTHEEGFRSAL 297
Query: 371 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
T +N G K +K D LSGE +REGL IISV++ NP+FEGQTKT+LGN V+ V
Sbjct: 298 TSVVNRYGTDKKLLK-GDEKLSGEDIREGLAAIISVKLANPQFEGQTKTKLGNTPVKSFV 356
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
+ + L ++ + +P I++K+ A +A +AA++AR L R+KS+L S S+PGKLAD
Sbjct: 357 QRVCNDRLVDWFDRNPAEAKMIITKASQAARARIAAQQARKLARRKSLLESGSMPGKLAD 416
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
C ST P ESE+FIVEGDSAGGSAKQGRD R Q I+ P++ I A
Sbjct: 417 CQSTDPRESEVFIVEGDSAGGSAKQGRDPRTQAIL-PIRGKILNVEKA 463
>gi|354605087|ref|ZP_09023076.1| DNA gyrase, B subunit [Alistipes indistinctus YIT 12060]
gi|353347666|gb|EHB91942.1| DNA gyrase, B subunit [Alistipes indistinctus YIT 12060]
Length = 652
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/472 (47%), Positives = 315/472 (66%), Gaps = 12/472 (2%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
E + + Y + IQVLEGLEAVRKRPAMYIG G +GLHHLVYE++DN++DEA AGY SN
Sbjct: 6 EKMIEEEYSASSIQVLEGLEAVRKRPAMYIGDIGVKGLHHLVYEVVDNSIDEALAGYCSN 65
Query: 130 IEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 189
IEV + DNS++V D+GRGIP D H KSALE VLTVLHAGGKF S Y VSGGLH
Sbjct: 66 IEVYINEDNSITVEDDGRGIPTDFHEKEGKSALEVVLTVLHAGGKFDKDS--YKVSGGLH 123
Query: 190 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 249
GVG+S VNALS L V R G + QK+S+G P+ + D GT I F PD
Sbjct: 124 GVGVSCVNALSNLLVAEVHRQGKVHVQKFSKGAPLGPMEI----TGETDSHGTIITFKPD 179
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 307
+F A ++++ ++ R+RELA+LN +L I ++E + + +E++ GL+E+V
Sbjct: 180 DSIFI-ATEYNYEILSSRLRELAYLNKGVRLNITDKREKDENGNYRRDEFYSTDGLKEFV 238
Query: 308 QWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 366
++L+ +++ L D + + DG+ +++A+Q+ + ++S+ + Y N+I TI+GGTH+ G
Sbjct: 239 KFLDENRESLIDNTIYIDTERDGVPVEVAMQYNT-SFSENVHSYVNNINTIEGGTHLTGF 297
Query: 367 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 426
+ +LTRTL + S + ++G+ REGLT +ISV+V P+FEGQTKT+LGN EV
Sbjct: 298 RRALTRTLKKYAEDSGMLSKVKFEINGDDFREGLTAVISVKVQEPQFEGQTKTKLGNSEV 357
Query: 427 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 486
VDQ++ LT YLE +P S+++K + A A AA++AR++V++K+VL S LPG
Sbjct: 358 SGAVDQAITTALTHYLEENPKDARSVVNKVILAATARHAARKAREMVQRKTVLSGSGLPG 417
Query: 487 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
KLADCSS +++EIF VEGDSAGG+AKQGRDR FQ I+ PL+ I A
Sbjct: 418 KLADCSSRDRDKTEIFFVEGDSAGGTAKQGRDRTFQAIM-PLRGKILNVEKA 468
>gi|373859274|ref|ZP_09602004.1| DNA gyrase, B subunit [Bacillus sp. 1NLA3E]
gi|372450943|gb|EHP24424.1| DNA gyrase, B subunit [Bacillus sp. 1NLA3E]
Length = 642
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 249/474 (52%), Positives = 322/474 (67%), Gaps = 13/474 (2%)
Query: 67 AFKENPVSK-TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAG 125
A ++N + + TY IQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AG
Sbjct: 2 AMEQNAMQEETYDESDIQVLEGLEAVRKRPGMYIGSTSGRGLHHLVWEIVDNSIDEALAG 61
Query: 126 YASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVS 185
+ S+I V + DNS++V DNGRGIP+ + + A+E + TVLHAGGKFGG VS
Sbjct: 62 HCSDINVIIEKDNSITVKDNGRGIPVGIQEKVGRPAVEVIFTVLHAGGKFGGGGY--KVS 119
Query: 186 GGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIR 245
GGLHGVG SVVNALS LEV V RDG Y+Q + RG P L V D GT I
Sbjct: 120 GGLHGVGASVVNALSTKLEVYVHRDGKIYYQVFERGVPQADLAV----VGETDHTGTTIH 175
Query: 246 FWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEE 305
F PD +FT +++D++T+A R+RELAFLN + I + ED E N+ NEY + GG++
Sbjct: 176 FIPDATIFTETLEYDYDTLATRLRELAFLNKNIKITI--EDKRVE-NKKNEYIYEGGIKS 232
Query: 306 YVQWLNTDKKPLHDVVGF-RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 364
YV+ LN K +H+ F + DGITID+ALQ+ +++Y+ + +AN+I T +GGTH
Sbjct: 233 YVEHLNRTKDVVHEEPIFIEGEKDGITIDVALQY-NESYTSNIYSFANNIHTYEGGTHEF 291
Query: 365 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 424
G K +LTR +N +K+ +K+ D +LSGE VREGLT IIS++ P+P+FEGQTKT+LGN
Sbjct: 292 GFKTALTRVINDYARKNGLIKENDTNLSGEDVREGLTAIISIKHPDPQFEGQTKTKLGNS 351
Query: 425 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 484
EVR + D E+ ++L P V ++ K L A +A LAAK+AR+L R+KS L SSL
Sbjct: 352 EVRTITDTIFSEHFEKFLLEDPGVARKVVEKGLMAARARLAAKKARELTRRKSALEVSSL 411
Query: 485 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PGKLADCSS P SEI+IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 412 PGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 464
>gi|319900374|ref|YP_004160102.1| DNA gyrase subunit B [Bacteroides helcogenes P 36-108]
gi|319415405|gb|ADV42516.1| DNA gyrase subunit B [Bacteroides helcogenes P 36-108]
Length = 657
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/468 (48%), Positives = 304/468 (64%), Gaps = 12/468 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG GLHHLVYE++DN++DEA AGY +IEV +
Sbjct: 12 NYSASNIQVLEGLEAVRKRPAMYIGDISENGLHHLVYEVVDNSIDEAMAGYCDHIEVTIN 71
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+D H KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 72 EDNSITVQDNGRGIPVDWHEKEQKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 129
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS+ + V+R+G Y Q+Y GKP+ + + + GT+ FWPD +FT
Sbjct: 130 VNALSKHMTTQVFRNGKIYQQEYECGKPLYAVK--EMGLCEPGLSGTKQTFWPDDSIFTV 187
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRK-EDSDPEKNQYNEYFFAG-GLEEYVQWLNTD 313
+ ++ H T+ R+RELA+LN + I L D E EYF + G++E+V++LN++
Sbjct: 188 S-EYKHTTLQARLRELAYLNKGIRITLTDLRVKDEEGKPLTEYFHSEEGVKEFVRYLNSN 246
Query: 314 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
PL DV+ + G+ I+ A+ + + Y + + Y N+I T +GGTH G +A+LTR
Sbjct: 247 NTPLFDDVIYLNTEKSGVPIECAIMY-NTGYRENLHSYVNNINTREGGTHEGGFRAALTR 305
Query: 373 TLNSLGKK--SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
L SK ++ + +SGE REGL +ISV+V P+FEGQTKT+LGN EV V
Sbjct: 306 VLKKYADDNCSKALEKAKVEISGEDFREGLIAVISVKVSEPQFEGQTKTKLGNNEVSGAV 365
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
+Q+V E L+ YLE HP I+ K L A A +AA++AR+ V++KS + +PGKLAD
Sbjct: 366 NQAVGEALSNYLEEHPKEAKVIVDKVLLAATARVAARKARESVQRKSPMSGGGMPGKLAD 425
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
CSS PEE E+F+VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 426 CSSKDPEECELFLVEGDSAGGSAKQGRNRAFQAIL-PLRGKILNVEKA 472
>gi|260890953|ref|ZP_05902216.1| DNA gyrase, B subunit [Leptotrichia hofstadii F0254]
gi|260859506|gb|EEX74006.1| DNA gyrase, B subunit [Leptotrichia hofstadii F0254]
Length = 660
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/485 (47%), Positives = 310/485 (63%), Gaps = 33/485 (6%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ YG+E I VLEGLEAVRKRP MYIGST RGLHHLV+EI+DN+VDEA AG I V
Sbjct: 1 MDNNYGAEAITVLEGLEAVRKRPGMYIGSTSARGLHHLVWEIVDNSVDEALAGICDKITV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+L N + V+DNGRGIP+ +H T KS LE VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 KILEGNIIEVSDNGRGIPVGMHK-TGKSTLEVVLTVLHAGGKF--DNDNYKVSGGLHGVG 117
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE LE TV RDG + Q Y RG P T + V GT +RF D ++
Sbjct: 118 VSVVNALSEWLEATVTRDGKIFRQTYERGVP--TSPVEEIGVADDGTHGTVVRFKADDEI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F T + +D++ + R++ELA+LN L I L E + E + E+ F GG+++++ +
Sbjct: 176 FETTV-YDYSVLESRLKELAYLNKGLKIELADE-RNAENVKAEEFLFEGGIKDFLNEIID 233
Query: 313 DKKPLHDVVGFR--------KDVDG----------------ITIDLALQWCSDAYSDTML 348
++K + DV+ K+V+ + +++A+ + + + +T+
Sbjct: 234 EEKIIDDVIYMADTMQIEEAKEVEAEDENGNTVIKQRGAKFVEVEIAMNYTT-SQRETVY 292
Query: 349 GYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRV 408
+ N+I T +GGTH+ G + +LTRT+N + K+ +KDK+ + G VREGL C+ISV++
Sbjct: 293 SFVNNINTHEGGTHVSGFRTALTRTINDIAKQMNLIKDKNGTFQGTDVREGLVCVISVKI 352
Query: 409 PNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKR 468
P P+FEGQTKT+LGN EV +V V L YLE HP + I+ K + +A AAK+
Sbjct: 353 PEPQFEGQTKTKLGNSEVTGIVSNIVGSNLKFYLEDHPKAAEKIIEKMAMSKRAREAAKK 412
Query: 469 ARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPL 528
AR+LV +K+ L SLPGKLADCSS P ESEIFIVEG+SAGGSAKQGRDRRFQ I+ PL
Sbjct: 413 ARELVLRKNTLEVGSLPGKLADCSSKDPAESEIFIVEGNSAGGSAKQGRDRRFQAIL-PL 471
Query: 529 QESIF 533
+ I
Sbjct: 472 RGKIL 476
>gi|419588848|ref|ZP_14124664.1| DNA gyrase subunit B [Campylobacter coli 317/04]
gi|380569130|gb|EIA91579.1| DNA gyrase subunit B [Campylobacter coli 317/04]
Length = 770
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/466 (46%), Positives = 310/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ + I++
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCNTIDI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD +
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGV----IGKSKKTGTTIEFWPDDTI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD++ +A R RELA+LNPK+TI + D + + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYDILAKRFRELAYLNPKITINFK----DNRVGKSESFHFEGGISQFVSDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKPIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++G+ VREGL ++SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDNKITGDDVREGLIAVVSVKVPEPQFEGQTKGKLGSTYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYLT+Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|313884315|ref|ZP_07818078.1| DNA gyrase, B subunit [Eremococcus coleocola ACS-139-V-Col8]
gi|312620468|gb|EFR31894.1| DNA gyrase, B subunit [Eremococcus coleocola ACS-139-V-Col8]
Length = 639
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/463 (50%), Positives = 315/463 (68%), Gaps = 11/463 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++QIQVLEGLEAVRKRP MYIG+T GLHHLV+EI+DN++DEA AGY +IEV + A
Sbjct: 10 YNADQIQVLEGLEAVRKRPGMYIGTTSIDGLHHLVWEIVDNSIDEALAGYCDHIEVFIEA 69
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNS++V DNGRGIP+D+ T + A ETV TVLHAGGKFG S Y VSGGLHGVG +VV
Sbjct: 70 DNSITVIDNGRGIPVDIQSKTGRPAAETVYTVLHAGGKFGNDS--YKVSGGLHGVGAAVV 127
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS L + ++R+G +H ++ RG +T + + + GT++ F PD +FT
Sbjct: 128 NALSTHLTLEIFREGKIHHLEFERG----LVTKELEVIGETELVGTKVNFVPDGTIFTDT 183
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
F + + RI+ELAFLN L I+L ED E+ + +F+ GGL+ +++ LN KKP
Sbjct: 184 TDFKYERLKDRIQELAFLNRGLRISL--EDKREERQASDSFFYEGGLKSFIEHLNHAKKP 241
Query: 317 LHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LH+ F + ++D I +++ALQ+ +D+YS +L +AN+I T +GG H G K +LTR +N
Sbjct: 242 LHEEPIFLEGEMDDIAVEIALQY-TDSYSTNLLSFANNIHTHEGGMHESGFKTALTRIIN 300
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+ + +KD D +LSGE REGLT IISV+ P+P+FEGQTKT+LGN EVR +VD+
Sbjct: 301 DYARNNNLLKDSDDNLSGEDTREGLTAIISVKHPDPQFEGQTKTKLGNSEVRTIVDRLFT 360
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
+L +P V I+ K + A +A AAKRAR++ R+KS L ++LPGKLADCSS
Sbjct: 361 AEFNTFLLENPRVAKIIVEKGILAARARSAAKRAREMTRKKSGLEIANLPGKLADCSSKE 420
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
E+ E+FIVEGDSAGGSAKQGR R +Q I+ P++ I A
Sbjct: 421 AEKCELFIVEGDSAGGSAKQGRSRMYQAIL-PIRGKILNVEKA 462
>gi|194335198|ref|YP_002016992.1| DNA gyrase subunit B [Pelodictyon phaeoclathratiforme BU-1]
gi|194307675|gb|ACF42375.1| DNA gyrase, B subunit [Pelodictyon phaeoclathratiforme BU-1]
Length = 649
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/473 (48%), Positives = 312/473 (65%), Gaps = 25/473 (5%)
Query: 72 PVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIE 131
P +YG+ IQVL+G+E VR RPAMYIG RGLHHLVYEI+DN++DE G+ I
Sbjct: 13 PTEASYGATNIQVLDGIEHVRMRPAMYIGDIYSRGLHHLVYEIVDNSIDETLGGFNDYIF 72
Query: 132 VALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGV 191
V+L D SV+V D+GRGIP+D+HP KSALE V+TV+ AGGKF Y VSGGLHGV
Sbjct: 73 VSLNPDGSVTVIDHGRGIPVDIHPEKQKSALELVMTVIGAGGKF--DKGAYKVSGGLHGV 130
Query: 192 GLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ 251
G SVVNALSE EV V RDG Y Q++ RG P V + S D +GT+ F PD
Sbjct: 131 GASVVNALSEWCEVEVSRDGKLYFQRFERGVP----QGDVKVIGSSDHRGTKTTFLPDHL 186
Query: 252 VFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQW- 309
+F T + + I R+RELAFLN +L+I ++ + + E F + GG++E+VQ+
Sbjct: 187 IFKTT-ELRKDIIIDRMRELAFLNKELSITVQDTEG------FQEIFHYEGGIKEFVQFT 239
Query: 310 ----LNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 365
LN K+P++ + G R D +++ALQ+ +D Y + + Y N+I T +GGTH+ G
Sbjct: 240 DQNRLNLLKEPIY-LYGER---DSTIVEIALQY-NDTYQENVFSYVNNINTHEGGTHVTG 294
Query: 366 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 425
+ +LTRTLN+ +K+ +K+ +SL+G+ +EGLT +ISV+V P+FEGQTKT+LGN E
Sbjct: 295 FRKALTRTLNAYAQKNDLLKNLKLSLTGDDFKEGLTAVISVKVAEPQFEGQTKTKLGNSE 354
Query: 426 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 485
+ +V+ + E L+E+ E +P+VL I+ K A + AA+RA++L R+KSVL SS LP
Sbjct: 355 TQSIVETVINEQLSEFAESNPNVLKMIIEKVKGAAMSREAARRAKELTRRKSVLESSGLP 414
Query: 486 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
GKLADCS PE E++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 415 GKLADCSINDPEHCELYIVEGDSAGGSAKQGRDRSFQAIL-PLKGKILNVEKA 466
>gi|357237100|ref|ZP_09124443.1| DNA gyrase, B subunit [Streptococcus criceti HS-6]
gi|356885082|gb|EHI75282.1| DNA gyrase, B subunit [Streptococcus criceti HS-6]
Length = 650
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/467 (49%), Positives = 322/467 (68%), Gaps = 11/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA AG+AS+IEV
Sbjct: 11 LAQQYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALAGFASHIEV 70
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ +D+S++V D+GRGIP+D+ T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 71 FIESDDSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVG 128
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
SVVNALS SLEV V ++G + Q+Y RG V L + D+ GT + F PD ++
Sbjct: 129 SSVVNALSTSLEVKVHKNGKIHFQEYKRGLVVADLKV----IGDTDKTGTSVHFTPDPEI 184
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FT +FD + +A RI+ELAFLN L I++ + E++Q Y + GG+ YV +LN
Sbjct: 185 FTETTEFDFDKLAKRIQELAFLNKGLKISITDKREGKEQSQV--YHYEGGIVSYVDYLNE 242
Query: 313 DKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K+ L D + ++DGI++++A+Q+ Y + +L +AN+I T +GGTH +G + +LT
Sbjct: 243 NKEVLFDQPIYTDGEMDGISVEVAMQYTG-TYHENVLSFANNIHTHEGGTHEQGFRTALT 301
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R +N +++K +K+KD +LSGE VREGLT IISV+ PNP+FEGQTKT+LGN EV K+ +
Sbjct: 302 RVINDYARQNKLLKEKDDNLSGEDVREGLTAIISVKHPNPQFEGQTKTKLGNSEVVKITN 361
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+ E + +L +P + I+ K + A KA +AAKRAR++ R+KS L S+LPGKLADC
Sbjct: 362 RLFSEAFSRFLLENPQIAKKIVEKGVLASKARIAAKRAREVTRKKSGLEISNLPGKLADC 421
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SS ++E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 422 SSNDASQNELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 467
>gi|157165358|ref|YP_001465928.1| DNA gyrase subunit B [Campylobacter concisus 13826]
gi|112801785|gb|EAT99129.1| DNA gyrase, B subunit [Campylobacter concisus 13826]
Length = 769
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/466 (46%), Positives = 302/466 (64%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ YG+E I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AGY I+V
Sbjct: 1 MENNYGAENIKVLKGLEAVRKRPGMYIGDTNISGLHHMIYEVVDNSIDEAMAGYCDTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L + S ++DNGRGIP+D+HP SA VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 ELTREGSAIISDNGRGIPVDMHPTEKISAATVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L V + RDG + Q++++G P + L + + +R GT++ FWPD +
Sbjct: 119 VSVVNALSKKLVVNIKRDGKLHRQEFAKGIPQSDLEV----IKTTNRTGTQVEFWPDDSI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD + R RELA+LNPK+TI + D + + F GGLE +V +N
Sbjct: 175 FEVT-EFDDEILVKRFRELAYLNPKITINFK----DQRNGRSESFHFEGGLESFVTDMNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
+ V F D + +D AL + +D YS+ +L + N+I+T DGGTH G +A LTR
Sbjct: 230 -ANAVSKAVSFSGGEDDVMVDFALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRAGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+ + + + ++KD ++GE +REGL ++SV+VP P+FEGQTK +LG+ V+ +V +
Sbjct: 288 VITNYVQANAAAREKDTKITGEDIREGLIAVVSVKVPEPQFEGQTKGKLGSSYVKPIVQK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
V + LT+Y E +P +I+ K+L A + AAK+ARDL R+K + +LPGKLADC
Sbjct: 348 MVFDVLTKYFEENPIEARAIMDKALMAARGREAAKKARDLTRKKESMSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P SE+++VEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 408 SKDPVISELYLVEGDSAGGSAKQGRDRVFQAIL-PLKGKILNVEKA 452
>gi|134297887|ref|YP_001111383.1| DNA gyrase subunit B [Desulfotomaculum reducens MI-1]
gi|134050587|gb|ABO48558.1| DNA gyrase subunit B [Desulfotomaculum reducens MI-1]
Length = 638
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 236/463 (50%), Positives = 320/463 (69%), Gaps = 12/463 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++QIQVLEGLEAVR+RP MYIGST RGLHHLVYE++DN++DEA AGY I V +
Sbjct: 10 YSADQIQVLEGLEAVRRRPGMYIGSTSARGLHHLVYEVVDNSIDEALAGYCDKIIVTIQE 69
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNS++V DNGRGIP+DLHP + A+E VLT+LHAGGKFGG S LHGVG+SVV
Sbjct: 70 DNSITVEDNGRGIPVDLHPKVGRPAVEVVLTMLHAGGKFGGGGYKVSGG--LHGVGVSVV 127
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS+ L V + R+G Y Q+YSRG P T L V + GT++ F PD+++F
Sbjct: 128 NALSKYLSVEIKRNGKIYKQEYSRGIPTTELQI----VGNSKTTGTKVTFKPDEEIFEEL 183
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+ F T++ RIRELA+LN + I L+ + DP Q +Y GG++++V+ LN +K+
Sbjct: 184 V-FSLETLSQRIRELAYLNKGIKIILQDKRKDPVAEQIFQY--DGGIKDFVKHLNRNKQT 240
Query: 317 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
+H + + + I +++A+Q+ +D Y++ ML YAN+I T+DGGTH G+K +LTR +N
Sbjct: 241 IHTKPIYVSGEKEQIVVEVAIQY-NDGYTENMLSYANNIHTVDGGTHEVGLKTALTRVIN 299
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
G++ +K+ D +LSGE +REG T +ISV+VP P+FEGQTKT+LGN EVR +VD
Sbjct: 300 DYGRQHGVLKNNDANLSGEDIREGATIVISVKVPEPQFEGQTKTKLGNSEVRGIVDSIFA 359
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L+ YL +P V I+ K ++A +A AA++AR+L R+KS L + SLPGKLADCS
Sbjct: 360 EKLSTYLVENPSVAKKIIEKGITAARAREAARKARELTRRKSALETMSLPGKLADCSEKD 419
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SEI++VEGDSAGGSAKQGR+RRFQ I+ PL+ I A
Sbjct: 420 PSVSEIYLVEGDSAGGSAKQGRERRFQAIL-PLKGKILNVEKA 461
>gi|223038508|ref|ZP_03608802.1| DNA gyrase, B subunit [Campylobacter rectus RM3267]
gi|222880365|gb|EEF15452.1| DNA gyrase, B subunit [Campylobacter rectus RM3267]
Length = 769
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/462 (47%), Positives = 307/462 (66%), Gaps = 16/462 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+E I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AGY I++
Sbjct: 1 MQQNYGAENIKVLKGLEAVRKRPGMYIGDTNISGLHHMIYEVVDNSIDEAMAGYCDTIDI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L + S ++DNGRGIP+D+HP SA VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 ELTREGSAIISDNGRGIPVDMHPTEKISAATVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L V + RDG + Q++S+G P + L + + +R GT++ FWPD +
Sbjct: 119 VSVVNALSKKLVVNIKRDGKLHRQEFSKGIPQSDLEI----IKTTNRTGTQVEFWPDDSI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLN 311
F ++FD + R RELA+L+PK+TI + ++N NE F + GGLE +V LN
Sbjct: 175 FEV-MEFDDEILTKRFRELAYLSPKITINFK-----DQRNGRNESFHYEGGLESFVTDLN 228
Query: 312 TDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
++ + V F + + +D AL + +D YS+ +L + N+I+T DGGTH G +A LT
Sbjct: 229 KNE-AVSKAVSFSGGEEDVLVDFALMY-NDTYSENLLSFVNNIKTPDGGTHEAGFRAGLT 286
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R + + + ++KD ++GE +REGL +ISV+VP P+FEGQTK +LG+ V+ +V
Sbjct: 287 RVITNYIAANAAAREKDTKITGEDIREGLIAVISVKVPEPQFEGQTKGKLGSSYVKPIVQ 346
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+ V E L++Y E +P +I+ K+L A + AAK+ARDL R+K L +LPGKLADC
Sbjct: 347 KMVFEVLSKYFEENPIEARAIMEKALMAARGREAAKKARDLTRKKEGLSIGTLPGKLADC 406
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
S P SE+++VEGDSAGGSAKQGRDR FQ I+ PL+ I
Sbjct: 407 QSKDPTISELYLVEGDSAGGSAKQGRDRVFQAIL-PLKGKIL 447
>gi|288800604|ref|ZP_06406062.1| DNA gyrase, B subunit [Prevotella sp. oral taxon 299 str. F0039]
gi|288332817|gb|EFC71297.1| DNA gyrase, B subunit [Prevotella sp. oral taxon 299 str. F0039]
Length = 657
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/467 (48%), Positives = 311/467 (66%), Gaps = 15/467 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ Y + IQVLEGLEAVRKRPAMYIG +GLHHLV E +DN++DEA AGY ++IEV
Sbjct: 7 IENNYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLVNETVDNSIDEAMAGYCTDIEV 66
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V DNGRGIP+D+H +KSALE V+TVLHAGGKF S Y VSGGLHGVG
Sbjct: 67 TINEDNSITVQDNGRGIPVDMHEKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVG 124
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+S VNALS ++ V+RDG Y Q+Y +GKP+ ++ V + +GTR +FWPD +
Sbjct: 125 VSCVNALSTHMKSQVFRDGKIYQQEYEQGKPLYSVKV----VGETNLRGTRQQFWPDPSI 180
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLN 311
FTT + + + I+ R+RELA+LN + I L D E E F+A GL+ + ++++
Sbjct: 181 FTTTL-YKWDIISRRMRELAYLNAGVRITLTDLRLDEEGKIRREEFYAQDGLKAFARYID 239
Query: 312 TDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 370
+ L DV+ + + + + I++A+ + +D YS+ + Y N+I TI+GGTH+ G + +L
Sbjct: 240 RHRTHLFDDVIYLKTEKNNVPIEVAVMYNTD-YSENIHSYVNNINTIEGGTHLTGFRMAL 298
Query: 371 TRTLNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 426
TRTL + SK ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 299 TRTLKAYADNDPVISKQIEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEV 358
Query: 427 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 486
V Q+V E L +YLE HP I K + A A +AA++AR+ V++K+ + LPG
Sbjct: 359 SGAVQQAVGEALADYLEEHPKEAKLICDKVILAATARIAARKARESVQRKNPMTGGGLPG 418
Query: 487 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
KLADCS+ P+ SEIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 419 KLADCSNKDPKTSEIFLVEGDSAGGSAKQGRDRYCQAIL-PLRGKIL 464
>gi|419541875|ref|ZP_14081012.1| DNA gyrase subunit B [Campylobacter coli 2548]
gi|380524227|gb|EIA49845.1| DNA gyrase subunit B [Campylobacter coli 2548]
Length = 770
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/466 (46%), Positives = 309/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I++
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
LSVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD +
Sbjct: 119 LSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGV----IGKSKKTGTTIEFWPDDTI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD++ +A R RELA+LNPK+TI + D + + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYDILAKRFRELAYLNPKITINFK----DNRVGKSESFHFEGGISQFVSDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKPIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++G+ VREGL ++SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDSKITGDDVREGLIAVVSVKVPEPQFEGQTKGKLGSSYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYL++Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLSKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|430741142|ref|YP_007200271.1| DNA gyrase subunit B [Singulisphaera acidiphila DSM 18658]
gi|430012862|gb|AGA24576.1| DNA gyrase, B subunit [Singulisphaera acidiphila DSM 18658]
Length = 851
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/472 (48%), Positives = 319/472 (67%), Gaps = 15/472 (3%)
Query: 71 NPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNI 130
N V+ Y I+VLEG+EA+RKRP MYIG T PRGLHHLVYE++DNA+DEA AGY NI
Sbjct: 29 NGVAADYTEANIRVLEGIEAIRKRPGMYIGDTTPRGLHHLVYEVVDNAIDEAMAGYCRNI 88
Query: 131 EVALLADNSVSVADNGRGIPIDLHPA-TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 189
V + D S SV D+GRGIP+ H T S LE VLT HAGGKF + Y VSGGLH
Sbjct: 89 HVTVHVDGSASVVDDGRGIPVGPHHQFTELSTLEVVLTKPHAGGKFDHDT--YKVSGGLH 146
Query: 190 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 249
GVG++VVNALSE LEV V RDG + Q+Y +G+ ++ + + GTR+RF PD
Sbjct: 147 GVGVTVVNALSEWLEVEVSRDGQVWRQEYKQGESQGSVRV----IGTTKVSGTRVRFLPD 202
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 309
++F I+FD++ + R+REL+FLN + I L E SD K++ ++F AGGL E+V +
Sbjct: 203 VEIFEK-IEFDYDILEKRLRELSFLNRGIAIRLTDERSDEPKDE--KFFSAGGLSEFVAY 259
Query: 310 LNTDKKPLHD-VVGFRKDVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 367
LN + LH + KD D + +++ALQ+ +D++S+ ++ Y N+I T++GGTH+ G +
Sbjct: 260 LNRSQTALHPPALLLGKDEDRMVEVEVALQY-NDSFSELVVSYCNNINTVEGGTHLTGFR 318
Query: 368 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
A+LTRTLN+ K T K+KD++++GE +EGLT IISVRVP+P+FEGQTKT+LGN EV
Sbjct: 319 AALTRTLNNYTKSITTAKNKDLAITGEDFKEGLTAIISVRVPDPQFEGQTKTKLGNGEVE 378
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVR-QKSVLRSSSLPG 486
+V + V E L +YLE +P ++ K+ A +A A ++AR+LVR +K VL LPG
Sbjct: 379 GIVAKVVNEKLADYLEQNPAAAKKVVQKAQLAAEAREATRKARELVRNRKGVLSGGGLPG 438
Query: 487 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
KL DC++ + SE+F+VEGDSAGG+A+ GRDR +Q I+ PL+ I A
Sbjct: 439 KLMDCTTRDQDSSELFLVEGDSAGGTAEGGRDRLYQAIL-PLRGKILNVERA 489
>gi|407458083|ref|YP_006736388.1| DNA gyrase subunit B [Chlamydia psittaci WS/RT/E30]
gi|405784844|gb|AFS23590.1| DNA gyrase, B subunit [Chlamydia psittaci WS/RT/E30]
Length = 807
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/475 (48%), Positives = 310/475 (65%), Gaps = 22/475 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
K Y + I VLEGL+AVR+RP MYIG TG GLHHLVYE++DN++DEA AGY S I V +
Sbjct: 7 KNYDASAITVLEGLQAVRERPGMYIGDTGITGLHHLVYEVVDNSIDEAMAGYCSEIHVRI 66
Query: 135 LADNSVSVADNGRGIPIDLHPATNK------SALETVLTVLHAGGKFGGSSSGYSVSGGL 188
L D ++++DNGRGIPI H +K SALE VLTVLHAGGKF S Y VSGGL
Sbjct: 67 LEDGGITISDNGRGIPIQTHEKESKKQGRDVSALEVVLTVLHAGGKFDKDS--YKVSGGL 124
Query: 189 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 248
HGVG+S VNAL+E L TV++D Y ++SRG PVT L + + D++GT I F+P
Sbjct: 125 HGVGVSCVNALAEKLVATVYKDKQAYQMEFSRGVPVTGLQL----LGATDKRGTEITFYP 180
Query: 249 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQ 308
D ++F++ + FD + + R+RELAFLN +TI ++D D ++ +F+ GG++ +V
Sbjct: 181 DNKIFSSCV-FDRSILIKRLRELAFLNRGITIIF-EDDRDVSFDKVI-FFYEGGIQSFVS 237
Query: 309 WLNTDKKPLHD----VVGFRKDVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
+LN +K+ L + G R DG I + ALQW S YS+ + YAN+I T GGTH+
Sbjct: 238 YLNQNKESLFPEPIYISGSRTGDDGDIEFEAALQWNS-GYSELIYSYANNIPTRQGGTHL 296
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
G +LTR LN+ K K+ +SL+GE +REGLT ++SV+VPNP+FEGQTK +LGN
Sbjct: 297 TGFSTALTRVLNAYIKAHNLAKNDKLSLTGEDIREGLTAVVSVKVPNPQFEGQTKQKLGN 356
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
+V V Q E LT + + +P + I+ K A +A AAK+AR+L +KS L S+
Sbjct: 357 SDVGSVSQQITGEALTIFFDENPQIAKMIVEKVFIAAQAREAAKKARELTLRKSALDSAR 416
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKL DC P + E++IVEGDSAGGSAKQGRDRRFQ I+ P++ I A
Sbjct: 417 LPGKLIDCLEKDPAKCEMYIVEGDSAGGSAKQGRDRRFQAIL-PIRGKILNVEKA 470
>gi|340351772|ref|ZP_08674674.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella pallens
ATCC 700821]
gi|339616843|gb|EGQ21482.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella pallens
ATCC 700821]
Length = 656
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/463 (49%), Positives = 309/463 (66%), Gaps = 15/463 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY S+IEV +
Sbjct: 11 YSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCSHIEVTINE 70
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNSV+V D+GRGIP+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S V
Sbjct: 71 DNSVTVEDDGRGIPVDEHEKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCV 128
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS ++ V+R+G Y Q+Y +GKP+ + V D+ GTR +FWPD +FTT
Sbjct: 129 NALSSHMKSQVFRNGKIYQQEYEQGKPLYPVKV----VGETDKTGTRQQFWPDGSIFTTT 184
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKK 315
+ F +A R+RELAFLN + I L + E E F A GL+E+V++++ +
Sbjct: 185 V-FQWEIVARRMRELAFLNAGIKITLTDLRPNSEGKTRQEVFHAKEGLKEFVRYVDRHRT 243
Query: 316 PL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
L DV+ + + GI I++A+ + +D Y++ + Y N+I TI+GGTH+ G + +LTRTL
Sbjct: 244 HLFDDVIYLKTEKQGIPIEVAIMYNTD-YNENIHSYVNNINTIEGGTHLTGFRTALTRTL 302
Query: 375 NSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
+ +K ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV V
Sbjct: 303 KAYADNDPQIAKQIEKAKIEITGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAV 362
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
Q+V E L+ YLE +P I K + A A +AA++AR+ V++K+V+ LPGKLAD
Sbjct: 363 QQAVGEALSYYLEENPVEAKLICDKVILAATARIAARKARESVQRKNVMTGGGLPGKLAD 422
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
CS+ P++ EIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 423 CSNKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAIL-PLRGKIL 464
>gi|407278555|ref|ZP_11107025.1| DNA gyrase subunit B [Rhodococcus sp. P14]
Length = 677
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 240/502 (47%), Positives = 322/502 (64%), Gaps = 41/502 (8%)
Query: 67 AFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGY 126
A K N + YG+ I VLEGLEAVRKRP MYIGSTG RGLHHL++E++DN+VDEA AG+
Sbjct: 3 AQKSNKSNSDYGASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEAMAGH 62
Query: 127 ASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSG 186
A+ +EV LL D V V D+GRGIP+ +H A+ +E VLT LHAGGKF S Y+VSG
Sbjct: 63 ATKVEVTLLEDGGVQVVDDGRGIPVGMH-ASGVPTVEVVLTQLHAGGKF--DSDAYAVSG 119
Query: 187 GLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRF 246
GLHGVG+SVVNALS LEV + RDG + Q Y KP T + P + GT +RF
Sbjct: 120 GLHGVGISVVNALSTKLEVEIDRDGYHWEQTYQSSKPGTLVKGE--PTRA---TGTTVRF 174
Query: 247 WPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPE---------------- 290
W D +F T ++ T+A R++E+AFLN LTI L E PE
Sbjct: 175 WADPDIFETTT-YNFETVARRLQEMAFLNKGLTITLTDERVAPEEVTDEVVSELAEAPKK 233
Query: 291 -------------KNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLAL 336
K + Y + GGLE+YV+ +N K+P+H+ VVGF G +++A+
Sbjct: 234 AEEQEQAEIEQQHKVKVRVYHYPGGLEDYVRHINRTKQPIHNSVVGFTAKGTGHELEVAM 293
Query: 337 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 396
QW S YS+++ +AN+I T +GGTH EG +A+LT +N K K +KDKD +L+G+ +
Sbjct: 294 QWNS-GYSESVHTFANTINTHEGGTHEEGFRAALTSVVNKYAKDKKLLKDKDPNLTGDDI 352
Query: 397 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 456
REGL IISV+V P+FEGQTKT+LGN EV+ V ++ E+L+ +LE +P +I++K+
Sbjct: 353 REGLAAIISVKVGEPQFEGQTKTKLGNTEVKSFVQKACNEHLSHWLEANPADAKTIVTKA 412
Query: 457 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 516
+S+ +A +AA++AR+LVR+KS LPGKLADC S P +SEI+IVEGDSAGGSAK G
Sbjct: 413 VSSAQARVAARKARELVRRKSATDLGGLPGKLADCRSNDPSKSEIYIVEGDSAGGSAKSG 472
Query: 517 RDRRFQVIINPLQESIFAFASA 538
RD +Q I+ PL+ I A
Sbjct: 473 RDSMYQAIL-PLRGKIINVEKA 493
>gi|419584022|ref|ZP_14120173.1| DNA gyrase subunit B [Campylobacter coli 1961]
gi|380561405|gb|EIA84343.1| DNA gyrase subunit B [Campylobacter coli 1961]
Length = 770
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/466 (46%), Positives = 312/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I++
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD +
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFDI----IGKSKKTGTTIEFWPDDTI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD++ +A R RELA+LNPK+TI + D+ KN+ + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYDILAKRFRELAYLNPKITINFK--DNRVGKNE--SFHFEGGISQFVSDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKPIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++G+ VREGL ++SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDSKITGDDVREGLIAVVSVKVPEPQFEGQTKGKLGSSYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYL++Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLSKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|365154395|ref|ZP_09350828.1| DNA gyrase subunit B [Campylobacter sp. 10_1_50]
gi|363650233|gb|EHL89324.1| DNA gyrase subunit B [Campylobacter sp. 10_1_50]
Length = 769
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/466 (46%), Positives = 302/466 (64%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ YG+E I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AGY I+V
Sbjct: 1 MENNYGAENIKVLKGLEAVRKRPGMYIGDTNISGLHHMIYEVVDNSIDEAMAGYCDTIDV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L + S ++DNGRGIP+D+HP SA VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 ELTREGSAIISDNGRGIPVDMHPTEKISAATVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L V + RDG + Q++++G P + L + + +R GT++ FWPD +
Sbjct: 119 VSVVNALSKKLVVNIKRDGKLHRQEFAKGIPQSDLEV----IKTTNRTGTQVEFWPDDSI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD + R RELA+LNPK+TI + D + + F GGLE +V +N
Sbjct: 175 FEVT-EFDDEILVKRFRELAYLNPKITINFK----DQRNGRSESFHFEGGLESFVTDMNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
+ V F D + +D AL + +D YS+ +L + N+I+T DGGTH G +A LTR
Sbjct: 230 -ANAVSKAVSFSGGEDDVMVDFALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRAGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+ + + + ++KD ++GE +REGL ++SV+VP P+FEGQTK +LG+ V+ +V +
Sbjct: 288 VITNYVQANAAAREKDTKITGEDIREGLIAVVSVKVPEPQFEGQTKGKLGSSYVKPIVQK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
V + LT+Y E +P +I+ K+L A + AAK+ARDL R+K + +LPGKLADC
Sbjct: 348 MVFDVLTKYFEENPIEARAIMDKALMAARGREAAKKARDLTRKKESISVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P SE+++VEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 408 SKDPVISELYLVEGDSAGGSAKQGRDRVFQAIL-PLKGKILNVEKA 452
>gi|448733643|ref|ZP_21715885.1| DNA gyrase subunit B [Halococcus salifodinae DSM 8989]
gi|445802163|gb|EMA52470.1| DNA gyrase subunit B [Halococcus salifodinae DSM 8989]
Length = 642
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 239/461 (51%), Positives = 320/461 (69%), Gaps = 21/461 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGL+AVRKRPAMYIGST RGLHHLVYE++DNA+DEA AG+ +IEV +
Sbjct: 6 YGAGQIQVLEGLQAVRKRPAMYIGSTDARGLHHLVYEVVDNAIDEALAGHCDSIEVTIHD 65
Query: 137 DN--SVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
D SVSV D+GRGIP+D H KSALE ++TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 66 DEDPSVSVTDDGRGIPVDEHE-DGKSALEVIMTVLHAGGKFDKES--YQVSGGLHGVGVS 122
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS+ +EVTV RDG + Q++ G P + V ++ + GT ++FWPD +F+
Sbjct: 123 VVNALSKWVEVTVKRDGAVWKQRFDHGAPEGEIE-RVRDLEPDEETGTELQFWPDDAIFS 181
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKE-DSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T FD +T+A R+RELAFLN + I L E D E+ +Y+ GG+ E+V +LN
Sbjct: 182 TT-SFDASTLANRLRELAFLNSGVEIELHDERDGSRERFRYD-----GGIREFVVYLNES 235
Query: 314 KKPLHDVVGFRKDV----DG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
K LH+ V + +D DG + +++A+Q +D ++ +AN+I T +GGTH+ G K
Sbjct: 236 KSALHEDVIYFEDAATVDDGEVAVEVAMQ-TTDELQGSIHAFANNINTREGGTHLTGFKT 294
Query: 369 SLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
+LTR +N ++ ++ D +L G +REGLT +ISV+ P+P+FEGQTKT+LGN EVR
Sbjct: 295 ALTRVVNDYAGENGLLRPLDGENLKGSDIREGLTAVISVKHPDPQFEGQTKTKLGNGEVR 354
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
+V+ +V E+L Y E HPD + + K++ A KA AAK+A +L R+KS L S++LPGK
Sbjct: 355 GIVESAVHEHLDTYFEEHPDTAKAAIGKAVEAAKARRAAKKAEELTRRKSALESTALPGK 414
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPL 528
LADC + PEE+E+FIVEGDSAGGSAKQGRDR FQ I+ PL
Sbjct: 415 LADCQTREPEEAELFIVEGDSAGGSAKQGRDREFQAIL-PL 454
>gi|256831260|ref|YP_003159987.1| DNA gyrase subunit B [Jonesia denitrificans DSM 20603]
gi|256684791|gb|ACV07684.1| DNA gyrase, B subunit [Jonesia denitrificans DSM 20603]
Length = 686
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/485 (47%), Positives = 317/485 (65%), Gaps = 32/485 (6%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + I VLEGLEAVRKRP MYIGSTG RGLHHLVYE++DN+VDEA AG+ I V +L
Sbjct: 27 YDANAITVLEGLEAVRKRPGMYIGSTGERGLHHLVYEVVDNSVDEALAGHCDTINVTILE 86
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D ++ V+DNGRGIP+ +HP + +E V+T+LHAGGKFGGS GY+VSGGLHGVG+SVV
Sbjct: 87 DGALEVSDNGRGIPVAIHPTEGRPTVEVVMTILHAGGKFGGS--GYAVSGGLHGVGISVV 144
Query: 197 NALSESLEVTVWRDGMEYHQKYSRG-KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
NALS +E + RDG +HQ ++ G KPV L P + K GT FWPD +F T
Sbjct: 145 NALSSRVETVIRRDGYTWHQSFADGGKPVGELR-QGEPTEEK---GTTQTFWPDADIFET 200
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKE---------------DSDP--EKNQYNEYF 298
+ FD T+ R +++AFLN L+I L + D+ P E+ + Y
Sbjct: 201 -VDFDFETLRARFQQMAFLNKGLSITLTDKRPDHADVSGDEVAGGDNSPTSERIKTVTYK 259
Query: 299 FAGGLEEYVQWLNTDKKP--LHD-VVGFR-KDVD-GITIDLALQWCSDAYSDTMLGYANS 353
+ GL +YV LNT K+ +HD ++ F +D D I++++A+QW + AYS+++ YAN+
Sbjct: 260 YDAGLLDYVHHLNTAKRVEVIHDEIIDFDAEDTDRKISVEIAMQWTT-AYSESVHTYANT 318
Query: 354 IRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEF 413
I T +GGTH EG +A+LT +N + +K+KD +L+GE +REGLT +ISV++ P+F
Sbjct: 319 ISTTEGGTHEEGFRAALTSLINRYARAKNILKEKDDNLTGEDIREGLTAVISVKLGEPQF 378
Query: 414 EGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLV 473
EGQTKT+LGN E R V + E + ++L+ HP+ I+ K++ A +A LAA++AR+
Sbjct: 379 EGQTKTKLGNTEARTFVQSIMNEKMNDWLDAHPNEAKEIIRKAIQASQARLAARKAREAT 438
Query: 474 RQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
R+K +L S +PGKL DC S PEE EI+IVEGDSAGGSA +GR+ Q I+ PL+ I
Sbjct: 439 RRKGLLESGGMPGKLRDCQSNRPEECEIYIVEGDSAGGSAVRGRNPHIQAIL-PLRGKIL 497
Query: 534 AFASA 538
A
Sbjct: 498 NVERA 502
>gi|335031676|ref|ZP_08525101.1| DNA gyrase, B subunit [Streptococcus anginosus SK52 = DSM 20563]
gi|333768955|gb|EGL46110.1| DNA gyrase, B subunit [Streptococcus anginosus SK52 = DSM 20563]
Length = 648
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/466 (48%), Positives = 320/466 (68%), Gaps = 11/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA AG+A++I+V
Sbjct: 10 AQDYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALAGFATHIQVF 69
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++V D+GRGIP+D+ T + A+ETV T+LHAGGKFGG S LHGVG
Sbjct: 70 IEKDNSITVVDDGRGIPVDIQEKTGRPAVETVFTILHAGGKFGGGGYKVSGG--LHGVGS 127
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS L+V V+++G Y Q+Y RG V L + DR GT + F PD ++F
Sbjct: 128 SVVNALSTQLDVRVYKNGQIYFQEYRRGHVVADLEI----IGETDRTGTTVHFTPDPEIF 183
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T ++FD + R++ELAFLN L I++ + E Q +Y + GG+ YVQ++N +
Sbjct: 184 TETVEFDFEKLNKRVQELAFLNRGLRISITDKREGLE--QTKDYHYEGGIASYVQYINEN 241
Query: 314 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K + + + ++D IT+++A+Q+ + Y +T++ +AN+I T +GGTH +G + +LTR
Sbjct: 242 KDVIFENPIYTDGEMDDITVEVAMQYTT-GYHETVMSFANNIHTHEGGTHEQGFRTALTR 300
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N KK+K +K+ + +L+GE VREGLT +ISV+ PNP+FEGQTKT+LGN EV K+ ++
Sbjct: 301 VINDYAKKNKLLKENEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVVKITNR 360
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E +++L +P V I+ K + A KA +AAKRAR++ R+KS L S+LPGKLADCS
Sbjct: 361 LFSEAFSDFLLENPAVAKKIVEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLADCS 420
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P E+E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 421 SNDPHETELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 465
>gi|338811356|ref|ZP_08623574.1| DNA topoisomerase IV, B subunit [Acetonema longum DSM 6540]
gi|337276646|gb|EGO65065.1| DNA topoisomerase IV, B subunit [Acetonema longum DSM 6540]
Length = 637
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 233/463 (50%), Positives = 315/463 (68%), Gaps = 15/463 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+EQIQVLEGLEAVRKRP MYIGST RGLHHLVYE++DN++DEA AGY + V +
Sbjct: 12 YGAEQIQVLEGLEAVRKRPGMYIGSTSARGLHHLVYEVVDNSIDEALAGYCDQVNVIIRK 71
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D+S++V DNGRGIP+ +H T K ALE V+TVLHAGGKFGG GY VSGGLHGVG+SVV
Sbjct: 72 DDSITVIDNGRGIPVGMH-ETGKPALEVVMTVLHAGGKFGGE--GYKVSGGLHGVGVSVV 128
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LEV V R+G Y ++ RG + + GT + F PD Q+F
Sbjct: 129 NALSEWLEVQVKREGKIYQMRFERGYTSQAMK----QIGETTETGTTVTFKPDAQIFEET 184
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+ + +T+ R+RELAFLN L I L +D + E+ F GG+ +V+ LN K
Sbjct: 185 V-YSFDTLKHRLRELAFLNKGLKITL----TDERSGESREFCFEGGIVSFVEHLNHSKDV 239
Query: 317 LHDVVGFRKDV-DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LH + + + D +++ALQ+ +D+Y++ + + N+I T +GGTH+ G K +LTRT+N
Sbjct: 240 LHPKPIYVEGIKDTTVVEIALQY-NDSYNENIFTFVNNINTQEGGTHLSGFKTALTRTMN 298
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+K +K+ D +LSGE VREGLT ++S++V P+FEGQTK++LGN E++ +VD
Sbjct: 299 DFARKLNLLKENDENLSGEDVREGLTGVVSLKVQQPQFEGQTKSKLGNSEIKGIVDTLFS 358
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L+E+ E +P V I+ K++ A +A AA++ARDL R+K+ L S+LPGKLADCSS
Sbjct: 359 EGLSEHFEENPSVTRKIIEKAILASRARDAARKARDLTRRKTALEVSALPGKLADCSSRD 418
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P ++EI++VEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 419 PMQTEIYLVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNVEKA 460
>gi|288929798|ref|ZP_06423641.1| DNA gyrase, B subunit [Prevotella sp. oral taxon 317 str. F0108]
gi|288328899|gb|EFC67487.1| DNA gyrase, B subunit [Prevotella sp. oral taxon 317 str. F0108]
Length = 657
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/464 (49%), Positives = 305/464 (65%), Gaps = 15/464 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHLV E +DN++DEA AGY SNIEV +
Sbjct: 10 NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLVNETVDNSIDEAMAGYCSNIEVTIN 69
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V D+GRGIP+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 70 EDNSITVQDDGRGIPVDEHEKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 127
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS + V+RDG Y Q+Y GKP+ + V D++GTR +FWPD +FTT
Sbjct: 128 VNALSSRMLSQVFRDGKIYQQEYETGKPLYPVKV----VGETDKRGTRQQFWPDPSIFTT 183
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDK 314
+ + + IA R+RELA+LN + I L D E F A GL+E+V++++ +
Sbjct: 184 TV-YRWDIIASRMRELAYLNAGVKITLTDLRPDENGKTRTETFHAKDGLKEFVRYVDRHR 242
Query: 315 KPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
L DV+ + + I I++A+ + +D YS+ + Y N+I TI+GGTH+ G + +LTRT
Sbjct: 243 THLFDDVIYLKTEKQNIPIEVAVMYNTD-YSENIHSYVNNINTIEGGTHLTGFRMALTRT 301
Query: 374 LNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
L + SK ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 302 LKAYADNDPVISKQIEKSKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGA 361
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
V Q+V E L YLE HP I K + A A +AA++AR+ V++K+ + LPGKLA
Sbjct: 362 VQQAVGEALGYYLEEHPKEAKLICDKVILAATARIAARKARESVQRKNPMSGGGLPGKLA 421
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
DCS+ P+ SEIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 422 DCSNKDPKTSEIFLVEGDSAGGSAKQGRDRYTQAIL-PLKGKIL 464
>gi|220903291|ref|YP_002478603.1| DNA gyrase subunit B [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219867590|gb|ACL47925.1| DNA gyrase, B subunit [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 801
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 234/466 (50%), Positives = 314/466 (67%), Gaps = 14/466 (3%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
+NPV Y + I +LEGL AVRKRPAMYIGST RGLHHLVYE++DN++DEA AG+ +
Sbjct: 4 QNPVDGGYTASSITILEGLSAVRKRPAMYIGSTDARGLHHLVYEVVDNSIDEAMAGFCTR 63
Query: 130 IEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 189
I V L ADNSV+V D+GRGIP+D+HP A++ V+T LHAGGKF +S Y VSGGLH
Sbjct: 64 ITVILHADNSVTVRDDGRGIPVDIHPKEGVPAVQVVMTKLHAGGKFDNTS--YKVSGGLH 121
Query: 190 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 249
GVG+S VNALSE L VTV RDG Y Q+YSRG P LT VD GT +RF PD
Sbjct: 122 GVGVSCVNALSEDLTVTVRRDGKRYRQRYSRGLPQDELTVIGEGVDG---HGTTVRFKPD 178
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 309
+++F + +F ++T+ R ELA+LN L I E D + + + GG+ ++V
Sbjct: 179 EEIFEVS-EFSYDTLKKRFEELAYLNKGLFI----ECIDERIGETHVFHAEGGIRQFVSD 233
Query: 310 LNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
LN+ ++ +H ++ VD +T+D ALQ+ + Y + +L +AN+IRT +GGTH+ G + +
Sbjct: 234 LNSGEQGIHSIIFGEGVVDNVTVDFALQYNA-GYKENILTFANNIRTKEGGTHLVGFRTA 292
Query: 370 LTRTLNSL--GKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 427
LTR +N G+ K K+ SLSG+ VREGLT +ISV++P P+FEGQTKT+LGN EV
Sbjct: 293 LTRAINGYIKGQADLVKKMKNTSLSGDDVREGLTAVISVKLPQPQFEGQTKTKLGNSEVA 352
Query: 428 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 487
+V V + L Y E +P + I+ K++ A +A AA+RA++LVR+K L ++LPGK
Sbjct: 353 GLVSGVVYDRLNIYFEENPKDIRLIIEKAVDAARARDAARRAKELVRRKGALSDNALPGK 412
Query: 488 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
LADC S P ESE+FIVEGDSAGGSAKQGR+ R Q I+ PL+ I
Sbjct: 413 LADCQSKDPSESELFIVEGDSAGGSAKQGRNPRNQAIL-PLRGKIL 457
>gi|419562924|ref|ZP_14100413.1| DNA gyrase subunit B [Campylobacter coli 1091]
gi|419569582|ref|ZP_14106642.1| DNA gyrase subunit B [Campylobacter coli 7--1]
gi|419605950|ref|ZP_14140334.1| DNA gyrase subunit B [Campylobacter coli LMG 9860]
gi|380539722|gb|EIA64076.1| DNA gyrase subunit B [Campylobacter coli 1091]
gi|380549218|gb|EIA73097.1| DNA gyrase subunit B [Campylobacter coli 7--1]
gi|380587539|gb|EIB08729.1| DNA gyrase subunit B [Campylobacter coli LMG 9860]
Length = 770
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/466 (46%), Positives = 310/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I++
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD +
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFDI----IGKSKKTGTTIEFWPDDTI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD++ +A R RELA+LNPK+TI + D ++ + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYDILAKRFRELAYLNPKITINFK----DNRVDKSESFHFEGGISQFVSDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKPIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++G+ VREGL ++SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDSKITGDDVREGLIAVVSVKVPEPQFEGQTKGKLGSSYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYL++Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLSKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|83816748|ref|YP_446507.1| DNA gyrase subunit B [Salinibacter ruber DSM 13855]
gi|83758142|gb|ABC46255.1| DNA gyrase, B subunit [Salinibacter ruber DSM 13855]
Length = 652
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/466 (49%), Positives = 311/466 (66%), Gaps = 13/466 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRP+MYIG G RGLHHLVYE+LDN++DEA AG+ I V +
Sbjct: 15 YAASNIQVLEGLEAVRKRPSMYIGDVGLRGLHHLVYEVLDNSIDEAMAGHCDEIGVEIYE 74
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVS+ DNGRGIP+D HPA ++SALE V+TVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 75 DGSVSIEDNGRGIPVDQHPAEDRSALEVVMTVLHAGGKFDKDS--YQVSGGLHGVGVSVV 132
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NAL+ EVTVWRDG + Q Y G P + V P+++ + GTRIRFWPD +F T
Sbjct: 133 NALASRFEVTVWRDGSVWEQNYLCGVPEDPVR-RVRPMEAGEETGTRIRFWPDGDIFKTT 191
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
+F T++ R+RELAFLN + I + R+ED + Y+ G+ +V +L+
Sbjct: 192 -EFRFETLSDRLRELAFLNAGVRIRVEDHREEDKGLARETYHS---EEGIIGFVDYLDEA 247
Query: 314 KKPLHDVVGFRKDVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
+ + D + + DG + ++LA+Q+ +D Y+ +L + N+I T +GGTH+ G + +LTR
Sbjct: 248 RDSILDETIYIAETDGEVPVELAMQY-NDEYNKNVLSFVNNINTHEGGTHVTGFRRALTR 306
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
TL +K+ + D LSG+ REGLT ++SV+V P+FEGQTKT+LGN +V+ +V+
Sbjct: 307 TLKRYAQKNDMLSDLKFDLSGDDFREGLTAVLSVKVSEPQFEGQTKTKLGNSDVQGIVES 366
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ L +LE HPD + I+ K + A +A AA++AR+LV++K SLPGKLADCS
Sbjct: 367 LINTELGRWLEDHPDQAERIIEKVIQAAEARAAARKARELVQRKDAFSGGSLPGKLADCS 426
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PEE E+++VEGDSAGGSAKQ RDR FQ I+ PL+ I A
Sbjct: 427 SRDPEEGELYLVEGDSAGGSAKQARDRHFQAIL-PLRGKILNVEKA 471
>gi|410453633|ref|ZP_11307580.1| DNA gyrase subunit B [Bacillus bataviensis LMG 21833]
gi|409932961|gb|EKN69911.1| DNA gyrase subunit B [Bacillus bataviensis LMG 21833]
Length = 640
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 238/467 (50%), Positives = 320/467 (68%), Gaps = 12/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V ++YG++QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AG+ I V
Sbjct: 7 VEESYGADQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGHCDEINV 66
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V DNGRGIP+D+ + A+E ++TVLHAGGKFGG S LHGVG
Sbjct: 67 IIEEDNSITVKDNGRGIPVDIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVG 124
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
SVVNALS LEV V RDG ++ K+ RG V L + + D GT F PD ++
Sbjct: 125 ASVVNALSTELEVYVHRDGKIHYIKFERGAVVKELAV----IGTTDHTGTITHFKPDSEI 180
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FT ++++++ +A RIRELAFLN L I + ED E N+ NEY + GG++ YV+ LN
Sbjct: 181 FTETLEYEYDILATRIRELAFLNRGLKITI--EDKRVE-NKRNEYHYEGGIKSYVEHLNR 237
Query: 313 DKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
K+ +HD + + DGI++++ALQ+ ++ Y+D + +AN+I T +GGTH G K +LT
Sbjct: 238 TKEVIHDEPIYMEGEKDGISVEVALQY-NEGYTDNIYSFANNIHTYEGGTHESGFKTALT 296
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R +N +K+ +K+ D +LSGE VREG+T I+S++ P+P+FEGQTKT+LGN EVR + D
Sbjct: 297 RVINDYARKNGLIKENDTNLSGEDVREGITAIVSIKHPDPQFEGQTKTKLGNSEVRAITD 356
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+++ +P V I+ K L A +A LAAK+AR+L R+KS L SSLPGKLADC
Sbjct: 357 TVFASTFDKFMLENPTVAKKIVEKGLMAARARLAAKKARELTRRKSALEVSSLPGKLADC 416
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SS P ESE+FIVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 417 SSKDPAESEMFIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 462
>gi|419545068|ref|ZP_14083999.1| DNA gyrase subunit B [Campylobacter coli 2553]
gi|380524098|gb|EIA49725.1| DNA gyrase subunit B [Campylobacter coli 2553]
Length = 770
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/466 (46%), Positives = 309/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I++
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD +
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGV----IGKSKKTGTTIEFWPDDTI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD++ +A R RELA+LNPK+TI + D + + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYDILAKRFRELAYLNPKITINFK----DNRVGKSESFHFEGGISQFVSDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + I++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKPIFFSVDEEDVNIEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++G+ VREGL ++SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDSKITGDDVREGLIAVVSVKVPEPQFEGQTKGKLGSSYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYL++Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLSKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|390953352|ref|YP_006417110.1| DNA gyrase subunit B [Aequorivita sublithincola DSM 14238]
gi|390419338|gb|AFL80095.1| DNA gyrase subunit B [Aequorivita sublithincola DSM 14238]
Length = 646
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/466 (46%), Positives = 311/466 (66%), Gaps = 11/466 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+YG++QIQ LEG+E VR RP+MYIG GPRGLHHLVYE++DN++DEA GY IE+ +
Sbjct: 9 SYGADQIQALEGMEHVRMRPSMYIGDVGPRGLHHLVYEVVDNSIDEAMGGYCDTIEMWIN 68
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNSV+V DNGRGIP+DLH SAL+ V+T + AGGKF S Y VSGGLHGVG+SV
Sbjct: 69 EDNSVTVKDNGRGIPVDLHKKEGVSALQVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSV 126
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS L TV RDG + Q+Y RGK + V P+ D +GT + F PD +F
Sbjct: 127 VNALSGHLTATVHRDGKIWQQEYERGKALYP----VKPIGETDYRGTIVTFKPDADIFQQ 182
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQY--NEYFFAGGLEEYVQWLNTD 313
++++++T+A R+REL+FLN LTI + + EK + ++ GL+E++++L+ +
Sbjct: 183 TLEYNYDTLASRMRELSFLNRGLTIYVTDKRHKDEKGEVVTEKFHSEEGLKEFIRFLDGN 242
Query: 314 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
++P+ V+ + + I +++A+ + + ++++ + Y N+I T +GGTH+ G +A LTR
Sbjct: 243 REPIIAQVISMEGEKNDIPVEVAMVYNT-SFNENLHSYVNNINTHEGGTHLAGFRAGLTR 301
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
TL S + ++G+ REGLT IISV+V P+FEGQTKT+LGN EV V Q
Sbjct: 302 TLKKYADASGMLDKLKFEIAGDDFREGLTAIISVKVQEPQFEGQTKTKLGNREVMAAVSQ 361
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+V E L YLE HP+ +I+ K + A +A AA++AR++V++K+V+ LPGKL+DCS
Sbjct: 362 AVSEMLENYLEEHPNDAKTIVQKVILAAQARHAARKAREMVQRKTVMSGGGLPGKLSDCS 421
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PE+ E+F+VEGDSAGG+AKQGRDR FQ I+ PL+ I A
Sbjct: 422 EQDPEKCEVFLVEGDSAGGTAKQGRDRNFQAIL-PLRGKILNVEKA 466
>gi|374597859|ref|ZP_09670861.1| DNA gyrase subunit B [Myroides odoratus DSM 2801]
gi|423323806|ref|ZP_17301648.1| DNA gyrase, B subunit [Myroides odoratimimus CIP 103059]
gi|373909329|gb|EHQ41178.1| DNA gyrase subunit B [Myroides odoratus DSM 2801]
gi|404609024|gb|EKB08449.1| DNA gyrase, B subunit [Myroides odoratimimus CIP 103059]
Length = 646
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/466 (47%), Positives = 310/466 (66%), Gaps = 11/466 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y ++ IQ LEG+E VR RP+MYIG G RGLHHLVYE++DN++DEA AG+ I V +
Sbjct: 9 NYSADSIQALEGMEHVRMRPSMYIGDVGVRGLHHLVYEVVDNSIDEALAGHCDTINVVIN 68
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+D+H SALE V+T + AGGKF S Y VSGGLHGVG+S
Sbjct: 69 EDNSITVEDNGRGIPVDIHKKEGVSALEVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSC 126
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS+ L TV+RDG Y Q+YS+GK + + + D++GT + F PD +FT
Sbjct: 127 VNALSDLLRATVYRDGKIYEQEYSKGKALFPVKV----IGETDKRGTTVMFKPDPTIFTQ 182
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRK-EDSDPEKNQYNEYFFAG-GLEEYVQWLNTD 313
+++ ++T+A R+RELAFLN LTI L + D + Q +E FF+ GL+E++++L+ +
Sbjct: 183 TLEYSYDTLASRLRELAFLNKGLTITLTDAREVDEKGQQKSEVFFSKEGLKEFIKFLDGN 242
Query: 314 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
+ P+ ++V+ D + +++AL + +D YS+ + Y N+I T +GGTH++G + LTR
Sbjct: 243 RTPIINEVIWMESDKGDVPVEVALVY-NDTYSENIYSYVNNINTHEGGTHLQGFRMGLTR 301
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
TL S + +SG+ REGLT IISV+V P+FEGQTKT+LGN EV V Q
Sbjct: 302 TLKKYADASGLLDKLKFEISGDDFREGLTAIISVKVMEPQFEGQTKTKLGNREVVSPVSQ 361
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+V E L YLE +P+ I+ K + A +A AAK+AR++V++K+V+ LPGKL+DCS
Sbjct: 362 AVAEMLENYLEENPNDAKIIVQKVILAAQARHAAKKAREMVQRKTVMTGGGLPGKLSDCS 421
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P + E+F+VEGDSAGG+AKQGRDR FQ I+ PL+ I A
Sbjct: 422 EQDPTKCEVFLVEGDSAGGTAKQGRDRNFQAIL-PLRGKILNVEKA 466
>gi|345016457|ref|YP_004818810.1| DNA topoisomerase IV subunit B [Thermoanaerobacter wiegelii Rt8.B1]
gi|344031800|gb|AEM77526.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 633
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/466 (49%), Positives = 319/466 (68%), Gaps = 16/466 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+TY + QIQ+LEGLEAVRKRP MYIGSTG RGLHHLVYE++DN++DEA AGY NI V +
Sbjct: 5 ETYTASQIQILEGLEAVRKRPGMYIGSTGSRGLHHLVYEVVDNSIDEALAGYCKNIVVTI 64
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DNS++V D+GRGIP D+HP K A+E LT+LHAGGKF ++ Y VSGGLHGVG+S
Sbjct: 65 HKDNSITVEDDGRGIPTDIHPKVGKPAVEVALTMLHAGGKF--NNDAYKVSGGLHGVGVS 122
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALSE LEV V + G Y Q Y RG P T L + GT I F PDK++F
Sbjct: 123 VVNALSEKLEVIVKQHGKIYRQIYERGVPKTDLEVIG----ETEETGTTITFKPDKEIFE 178
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
+ FD++ +A R+RELAFLN + I L E E+ + + GG+ +V++LN +K
Sbjct: 179 ETV-FDYDVLAQRLRELAFLNKGINIKLIDERHGKEE----VFNYEGGIISFVKYLNRNK 233
Query: 315 KPLHD--VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
+ LH+ + K+ D +++ +Q+ +D+Y++ + +AN+I T +GGTH+ G KA+LT+
Sbjct: 234 EVLHEEPIYMEAKNSD-YEVEVCMQY-NDSYTENIFSFANNIDTREGGTHLVGFKAALTK 291
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N +K +KD + +L GE VREGLT I+SV++ NP+FEGQTKT+LGN E+R +V+
Sbjct: 292 VINDYARKYGIIKDNEKNLQGEDVREGLTAIVSVKLKNPQFEGQTKTKLGNSEMRSIVEN 351
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
V E L+ +LE +P V I+ K+ A +A AA++AR+L R+KS L +++LPGKLADCS
Sbjct: 352 VVTEKLSAFLEENPSVAKVIVEKATQAARAREAARKARELTRRKSALENTTLPGKLADCS 411
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P + E+F+VEGDSAGGSAK GR+ RFQ I+ PL+ I A
Sbjct: 412 EKDPSKCELFLVEGDSAGGSAKSGRNSRFQAIL-PLRGKILNVEKA 456
>gi|184154481|ref|YP_001842821.1| DNA gyrase subunit B [Lactobacillus fermentum IFO 3956]
gi|227514123|ref|ZP_03944172.1| ATP-hydrolyzing DNA topoisomerase [Lactobacillus fermentum ATCC
14931]
gi|260662542|ref|ZP_05863437.1| DNA gyrase, B subunit [Lactobacillus fermentum 28-3-CHN]
gi|385811790|ref|YP_005848181.1| DNA gyrase subunit B [Lactobacillus fermentum CECT 5716]
gi|183225825|dbj|BAG26341.1| DNA gyrase subunit B [Lactobacillus fermentum IFO 3956]
gi|227087494|gb|EEI22806.1| ATP-hydrolyzing DNA topoisomerase [Lactobacillus fermentum ATCC
14931]
gi|260553233|gb|EEX26176.1| DNA gyrase, B subunit [Lactobacillus fermentum 28-3-CHN]
gi|299782689|gb|ADJ40687.1| DNA gyrase subunit B [Lactobacillus fermentum CECT 5716]
Length = 649
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/475 (48%), Positives = 309/475 (65%), Gaps = 11/475 (2%)
Query: 66 EAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAG 125
E ++ ++ Y + QIQVL+GLEAVRKRP MYIGST +GLHHLV+EI+DN +DEA AG
Sbjct: 6 EQARKAELASEYDASQIQVLKGLEAVRKRPGMYIGSTTVQGLHHLVWEIVDNGIDEALAG 65
Query: 126 YASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVS 185
+ I V + DNS+ V DNGRGIP+D+ T K ALETV TVLHAGGKFG + GY VS
Sbjct: 66 FCDEINVIVEPDNSIIVTDNGRGIPVDIQKETGKPALETVFTVLHAGGKFG--NGGYKVS 123
Query: 186 GGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVD-SKDRQGTRI 244
GGLHGVG SVVNALS L+V V R G EY+ ++RG T + V+ D + GT +
Sbjct: 124 GGLHGVGASVVNALSTELDVKVARQGKEYYMDFARGHVNTAMK--VIKDDLPQSAHGTTV 181
Query: 245 RFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLE 304
F PD ++F ++ NT+ R+RELAFLN L I + ED K + + + GG+
Sbjct: 182 HFVPDPEIFRETTVYNINTLIDRLRELAFLNKGLKITV--EDRREGKEKQESFHYEGGIR 239
Query: 305 EYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
YV++LN + L D + + GIT++++LQ+ D Y +L + N+I T +GGTH
Sbjct: 240 HYVEFLNEGHELLFDPPIYVEGEYKGITVEVSLQYTDD-YRSNLLTFTNNIHTYEGGTHE 298
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
G K +LTR +N G+KS +K +++LSGE VREGLT ++S++ PNP+FEGQTKT+L N
Sbjct: 299 TGFKTALTRVINDYGRKSGQIKG-NVTLSGEDVREGLTAVVSIKHPNPQFEGQTKTKLSN 357
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
+ R D E +T ++ +PDV I+ K + A KA AAKRAR++ R+KS L S+
Sbjct: 358 SDARTATDHIFAETMTRFMMENPDVARKIVEKGMLASKARDAAKRAREVTRKKSGLEISN 417
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKLAD +S P SE+FIVEGDSAGGSAKQGR R Q I+ P++ I A
Sbjct: 418 LPGKLADNTSKDPAISELFIVEGDSAGGSAKQGRSRLTQAIL-PIRGKILNVEKA 471
>gi|117927216|ref|YP_871767.1| DNA gyrase subunit B [Acidothermus cellulolyticus 11B]
gi|117647679|gb|ABK51781.1| DNA gyrase subunit B [Acidothermus cellulolyticus 11B]
Length = 666
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 240/482 (49%), Positives = 311/482 (64%), Gaps = 26/482 (5%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ +Y + I VLEGLEAVRKRP MYIGSTG RGLHHLVYE++DNAVDEA AG I+V
Sbjct: 10 ASSYDASSITVLEGLEAVRKRPGMYIGSTGERGLHHLVYEVVDNAVDEALAGACDRIDVT 69
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
LLAD V V DNGRGIP+D HP + A+E VLTVLHAG KFGG GY VSGGLHGVG+
Sbjct: 70 LLADGGVRVVDNGRGIPVDEHPGEKRPAVEVVLTVLHAGAKFGG--RGYKVSGGLHGVGV 127
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE L+V V RDG + Q Y RG P L + DR GT + FWPD ++F
Sbjct: 128 SVVNALSERLDVEVHRDGYVWRQSYRRGTPTGPLQRG----EPTDRTGTTVTFWPDPEIF 183
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKE-------DSDPEKNQYNE------YFFA 300
T +F T+A R+RE+AFLN LTI LR E D EK + Y +
Sbjct: 184 ETT-RFSFETLANRLREIAFLNKGLTITLRDERPAEHLDSDDAEKPAGGDDPTEVYYRYD 242
Query: 301 GGLEEYVQWLNTDKKPLH-DVVGFRKD--VDGITIDLALQWCSDAYSDTMLGYANSIRTI 357
GGL +YV LN K+P H ++ F V ++++ ALQW + Y++++ +AN+I T
Sbjct: 243 GGLVDYVAHLNATKEPAHRSIISFEAHDPVSDMSLEAALQWNT-GYTESVHTFANTINTH 301
Query: 358 DGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQT 417
+GGTH EG +A+LT +N G++ +K K+ L+GE +REGLT I+S+++ P+FEGQT
Sbjct: 302 EGGTHEEGFRAALTYLVNKFGEEWNLIKKKEDRLTGEDIREGLTAILSIKLKEPQFEGQT 361
Query: 418 KTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQK- 476
KT+LGN EV+ V + L E+ E +P I+ K++ A A +AA++ARDL R +
Sbjct: 362 KTKLGNTEVKSFVQTVCNDRLGEWFEKNPAEGKDIVRKAIQAATARIAARKARDLARNRK 421
Query: 477 SVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFA 536
+L LPGKL DC ST PEE E+FIVEGDSAGGSA+QGRD R Q ++ P++ I
Sbjct: 422 GLLGGGGLPGKLVDCQSTNPEECELFIVEGDSAGGSARQGRDPRTQAVL-PIRGKILNVE 480
Query: 537 SA 538
A
Sbjct: 481 RA 482
>gi|419581214|ref|ZP_14117521.1| DNA gyrase subunit B [Campylobacter coli 1957]
gi|380559755|gb|EIA82892.1| DNA gyrase subunit B [Campylobacter coli 1957]
Length = 770
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/466 (46%), Positives = 309/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I++
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD +
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFDI----IGKSKKTGTTIEFWPDDTI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD++ +A R RELA+LNPK+TI + D + + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYDILAKRFRELAYLNPKITINFK----DNRVGKSESFHFEGGISQFVSDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKPIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++G+ VREGL ++SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDSKITGDDVREGLIAVVSVKVPEPQFEGQTKGKLGSSYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYL++Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLSKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|152991737|ref|YP_001357458.1| DNA gyrase subunit B [Sulfurovum sp. NBC37-1]
gi|151423598|dbj|BAF71101.1| DNA gyrase subunit B [Sulfurovum sp. NBC37-1]
Length = 773
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/463 (48%), Positives = 299/463 (64%), Gaps = 15/463 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ I+VL+GLEAVRKRP MYIG T +GLHHLVYE++DN++DEA AGY I+V L
Sbjct: 6 YGASNIKVLKGLEAVRKRPGMYIGDTSTKGLHHLVYEVVDNSIDEAMAGYCDTIKVTLTK 65
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
S + DNGRGIP+ HP SA VLTVLHAGGKF + Y VSGGLHGVG+SVV
Sbjct: 66 AGSAIIEDNGRGIPVTEHPTEKISAATVVLTVLHAGGKFDKDT--YKVSGGLHGVGVSVV 123
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS+ L +TV++DG + Q + +G P L + GT+I FWPD +FT
Sbjct: 124 NALSKDLHLTVFKDGEIHEQSFQKGIPQEPLVA----TGPTRKTGTKIEFWPDDSIFTEG 179
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKE-DSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
+ F + R REL +LNP +TI + E D EK + F GG++++V+ +NT K
Sbjct: 180 VTFQKEILLKRFRELCYLNPSITIEFKDERDGTKEK-----FHFEGGIKQFVEDMNT-KP 233
Query: 316 PLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
PL F+ D I ID+AL +C DA S+ L + N+I+T DGGTH G +A LTR+++
Sbjct: 234 PLSTAQFFQGKADDIEIDIALMYC-DADSEKTLSFVNNIKTPDGGTHEAGFRAGLTRSMS 292
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
S K+ + K+K ++G+ +EGL I+SVRVP P+FEGQTK +LG+ VR +V +
Sbjct: 293 SYISKNASAKEKGTKITGDDCKEGLIAIVSVRVPEPQFEGQTKGKLGSSYVRPLVQKFFS 352
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E +YLE +P +I+++ L A + AAKRA+DLV++K + +LPGKLADC S
Sbjct: 353 EQFNKYLEENPVEAKAIMAQVLLAARGRDAAKRAKDLVKRKDSMSIGTLPGKLADCQSKD 412
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P+ SEI++VEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 413 PKISEIYLVEGDSAGGSAKQGRDRVFQAIL-PLKGKILNVEKA 454
>gi|326390355|ref|ZP_08211914.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter ethanolicus JW
200]
gi|392940031|ref|ZP_10305675.1| DNA topoisomerase IV, B subunit, Gram-positive/DNA gyrase, B
subunit [Thermoanaerobacter siderophilus SR4]
gi|325993632|gb|EGD52065.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter ethanolicus JW
200]
gi|392291781|gb|EIW00225.1| DNA topoisomerase IV, B subunit, Gram-positive/DNA gyrase, B
subunit [Thermoanaerobacter siderophilus SR4]
Length = 633
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/466 (49%), Positives = 319/466 (68%), Gaps = 16/466 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+TY + QIQ+LEGLEAVRKRP MYIGSTG RGLHHLVYE++DN++DEA AGY NI V +
Sbjct: 5 ETYTASQIQILEGLEAVRKRPGMYIGSTGSRGLHHLVYEVVDNSIDEALAGYCKNIVVTI 64
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DNS++V D+GRGIP D+HP K A+E LT+LHAGGKF ++ Y VSGGLHGVG+S
Sbjct: 65 HKDNSITVEDDGRGIPTDIHPKVGKPAVEVALTMLHAGGKF--NNDAYKVSGGLHGVGVS 122
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALSE LEV V + G Y Q Y RG P T L + GT I F PDK++F
Sbjct: 123 VVNALSEKLEVIVKQHGKIYRQIYERGVPKTDLEVIG----ETEETGTTITFKPDKEIFE 178
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
+ FD++ +A R+RELAFLN + I L E E+ + + GG+ +V++LN +K
Sbjct: 179 ETV-FDYDVLAQRLRELAFLNKGINIKLIDERHGKEE----VFNYEGGIISFVKYLNRNK 233
Query: 315 KPLHD--VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
+ LH+ + K+ D +++ +Q+ +D+Y++ + +AN+I T +GGTH+ G KA+LT+
Sbjct: 234 EVLHEEPIYMEAKNSD-YEVEVCMQY-NDSYNENIFSFANNIDTREGGTHLVGFKAALTK 291
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N +K +KD + +L GE VREGLT I+SV++ NP+FEGQTKT+LGN E+R +V+
Sbjct: 292 VINDYARKYGIIKDNEKNLQGEDVREGLTAIVSVKLKNPQFEGQTKTKLGNSEMRSIVEN 351
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
V E L+ +LE +P V I+ K+ A +A AA++AR+L R+KS L +++LPGKLADCS
Sbjct: 352 VVTEKLSAFLEENPSVAKVIVEKATQAARAREAARKARELTRRKSALENTTLPGKLADCS 411
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P + E+F+VEGDSAGGSAK GR+ RFQ I+ PL+ I A
Sbjct: 412 EKDPSKCELFLVEGDSAGGSAKSGRNSRFQAIL-PLRGKILNVEKA 456
>gi|407459325|ref|YP_006737428.1| DNA gyrase subunit B [Chlamydia psittaci M56]
gi|405786290|gb|AFS25035.1| DNA gyrase, B subunit [Chlamydia psittaci M56]
Length = 806
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/475 (48%), Positives = 309/475 (65%), Gaps = 22/475 (4%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
K Y + I VLEGL+AVR+RP MYIG TG GLHHLVYE++DN++DEA AGY S I V +
Sbjct: 6 KNYDASAITVLEGLQAVRERPGMYIGDTGITGLHHLVYEVVDNSIDEAMAGYCSEIHVRI 65
Query: 135 LADNSVSVADNGRGIPIDLHPATNK------SALETVLTVLHAGGKFGGSSSGYSVSGGL 188
L D ++++DNGRGIPI H +K SALE VLTVLHAGGKF S Y VSGGL
Sbjct: 66 LEDGGITISDNGRGIPIQTHEKESKKQGRDVSALEVVLTVLHAGGKFDKDS--YKVSGGL 123
Query: 189 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 248
HGVG+S VNAL+E L TV++D Y ++SRG PVT L + + D+QGT I F+P
Sbjct: 124 HGVGVSCVNALAEKLVATVYKDKQAYQMEFSRGVPVTGLQL----LGATDKQGTEITFYP 179
Query: 249 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQ 308
D ++F++ + FD + + R+RELAFLN +TI ++D D ++ +F+ GG++ +V
Sbjct: 180 DNKIFSSCV-FDRSILIKRLRELAFLNRGITIIF-EDDRDVSFDKVI-FFYEGGIQSFVS 236
Query: 309 WLNTDKKPLHD----VVGFRKDVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 363
+LN +K+ L + G R DG I + ALQW S YS+ + YAN+I T GGTH+
Sbjct: 237 YLNQNKESLFPEPIYISGSRTGDDGDIEFEAALQWNS-GYSELIYSYANNIPTRQGGTHL 295
Query: 364 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 423
G +LTR LN+ K K+ +SL+GE +REGLT ++SV+VPNP+FEGQTK +LGN
Sbjct: 296 TGFSTALTRVLNAYIKAHNLAKNDKLSLTGEDIREGLTAVVSVKVPNPQFEGQTKQKLGN 355
Query: 424 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
+V V Q E LT + + +P + I+ K A +A AAK+AR+L +KS L S+
Sbjct: 356 SDVGSVSQQITGEALTIFFDENPQIAKMIVEKVFIAAQAREAAKKARELTLRKSALDSAR 415
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKL DC P + E++IVEGDSAGGSAKQGRDR FQ I+ P++ I A
Sbjct: 416 LPGKLIDCLEKDPAKCEMYIVEGDSAGGSAKQGRDRCFQAIL-PIRGKILNVEKA 469
>gi|229496104|ref|ZP_04389826.1| DNA gyrase, B subunit [Porphyromonas endodontalis ATCC 35406]
gi|229317000|gb|EEN82911.1| DNA gyrase, B subunit [Porphyromonas endodontalis ATCC 35406]
Length = 653
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/467 (48%), Positives = 311/467 (66%), Gaps = 12/467 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y + IQVLEGLEAVRKRPAMYIG +GLHHLVYE++DN++DEA AGY ++++V +
Sbjct: 12 QEYSAGSIQVLEGLEAVRKRPAMYIGDISEKGLHHLVYEVVDNSIDEALAGYCTDVKVTI 71
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
L DNS+SV DNGRGIP+D+HP +SALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 72 LEDNSISVEDNGRGIPVDIHPKEGRSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVS 129
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VNALS L V+RDG + Q++S+GKP+ + V DR GT + F PD +FT
Sbjct: 130 CVNALSTHLRADVYRDGKHFVQEFSKGKPLYS----VKEEGESDRTGTTVTFTPDNSIFT 185
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRK-EDSDPEKNQYNEYFFA-GGLEEYVQWLNT 312
+I + +A R+RELAFLN L ++L + D E N E F++ GL+E+V++++
Sbjct: 186 VSI-YQFKILAHRLRELAFLNAGLRLSLTDLRERDEEGNPLTEVFYSEDGLKEFVRFIDQ 244
Query: 313 DK-KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
K L DV+ + D + I++A+ + D Y + + Y N I TI+GGTH+ G + +LT
Sbjct: 245 SKVNLLDDVIHIKNDKGEVPIEVAMTYNQD-YQENVYSYVNDINTIEGGTHLTGFRRALT 303
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RTL SK ++ +++ G+ REGLT +IS++V P+FEGQTKT+LGN EV +V+
Sbjct: 304 RTLKQYATDSKMLEKVKVNVEGDDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVIGIVE 363
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+V E L YLE HP +I+ K + A +A AA AR LV +KS L + LPGKL+DC
Sbjct: 364 SAVSEALAIYLEEHPQQAKAIVDKVVLAAQARHAAANARKLVLRKSPLAAGGLPGKLSDC 423
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
+S P + EIF+VEGDSAGG+AKQGRDR +Q I+ PL+ I A
Sbjct: 424 TSKDPAKCEIFLVEGDSAGGTAKQGRDRMYQAIL-PLRGKILNVEKA 469
>gi|347751700|ref|YP_004859265.1| DNA gyrase subunit B [Bacillus coagulans 36D1]
gi|347584218|gb|AEP00485.1| DNA gyrase, B subunit [Bacillus coagulans 36D1]
Length = 641
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 234/472 (49%), Positives = 318/472 (67%), Gaps = 13/472 (2%)
Query: 69 KENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
+E ++YG+EQIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AG+
Sbjct: 3 QEQLQKQSYGAEQIQVLEGLEAVRKRPGMYIGSTSARGLHHLVWEIVDNSIDEALAGFCD 62
Query: 129 NIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 188
I V + DNS++V DNGRGIP+ + + A+E ++T+LHAGGKFGG S L
Sbjct: 63 EINVFIEKDNSITVKDNGRGIPVGIQEKVGRPAVEVIMTILHAGGKFGGGGYKVSGG--L 120
Query: 189 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 248
HGVG SVVNALS L+V V RDG Y+QKY RGKP L + DR GT F P
Sbjct: 121 HGVGASVVNALSTELDVYVHRDGHIYYQKYRRGKPAFDLKI----IGETDRTGTTTHFKP 176
Query: 249 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR-KEDSDPEKNQYNEYFFAGGLEEYV 307
D ++FT +FD + + R+RELAFLN + I + K + +P K EY + GG++ YV
Sbjct: 177 DPEIFTETTEFDFDILTTRLRELAFLNKGIKITIEDKREKNPRKQ---EYHYEGGIKSYV 233
Query: 308 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 366
+ LN K+ LH + + + DGIT++++LQ+ +D ++ + +AN+I T +GGTH G
Sbjct: 234 EHLNRSKEVLHKEPIYVEGEKDGITVEVSLQY-NDGFASNIYSFANNIHTYEGGTHESGF 292
Query: 367 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 426
K +LTR +N +K+ +K+ + +L+GE VREGLT I+S++ P+P+FEGQTKT+LGN E
Sbjct: 293 KTALTRVINDYARKNNLIKENEANLTGEDVREGLTAIVSIKHPDPQFEGQTKTKLGNTEA 352
Query: 427 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 486
R + D E +++ +P V I+ K L A +A +AAK+AR+L R+KS L S+SLPG
Sbjct: 353 RTITDAVFSETFEKFMMENPQVARKIVEKGLMAARARMAAKKARELTRRKSALESTSLPG 412
Query: 487 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
KLADC+S P ESE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 413 KLADCTSRDPAESELYIVEGDSAGGSAKQGRDRMFQAIL-PLRGKILNVEKA 463
>gi|241889819|ref|ZP_04777117.1| DNA gyrase, B subunit [Gemella haemolysans ATCC 10379]
gi|241863441|gb|EER67825.1| DNA gyrase, B subunit [Gemella haemolysans ATCC 10379]
Length = 638
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 235/464 (50%), Positives = 316/464 (68%), Gaps = 11/464 (2%)
Query: 70 ENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASN 129
EN ++ Y ++QIQVLEGLEAVR RP MYIGST +GLHHLV+EI+DN++DEA AGY +
Sbjct: 3 ENKKTQEYNADQIQVLEGLEAVRVRPGMYIGSTSSKGLHHLVWEIVDNSIDEALAGYCNT 62
Query: 130 IEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLH 189
I VA+ N + V DNGRGIP+D+ T K ALE +LTVLHAGGKF GY VSGGLH
Sbjct: 63 ITVAIEEGNWIRVEDNGRGIPVDIQEQTGKPALEVILTVLHAGGKF--GGGGYKVSGGLH 120
Query: 190 GVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPD 249
GVG SVVNALS +LE +V RDG Y K+ RG V +T + DR GT IRF D
Sbjct: 121 GVGASVVNALSTNLEASVHRDGKIYSMKFERGDVVQGITV----IGDTDRTGTTIRFKAD 176
Query: 250 KQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW 309
++F ++++ + RIRELAFLN +TI L+ E EK + + + GGL EYV+
Sbjct: 177 PEIFQETTVYEYDILRTRIRELAFLNKGITIILKDERIGQEKEE--TFCYEGGLLEYVEM 234
Query: 310 LNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
LN +K LH+ + ++DG +++++Q+ + YS+ +L YAN+I T +GGTH G K +
Sbjct: 235 LNENKDALHEAIYVHGEMDGKEVEISMQYNT-GYSNNVLSYANNINTHEGGTHESGFKTA 293
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
LTR +NS GKK+K +KDK+ SL+G+ VREGL IIS++ PNP+FEGQTKT+LGN E+ +
Sbjct: 294 LTRIINSYGKKNKLIKDKE-SLTGDDVREGLVAIISIKHPNPQFEGQTKTKLGNSEMSTI 352
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
++ E L +L +P I+ K L A +A +AAK+AR+ R+K+ L ++LPGKLA
Sbjct: 353 TNKLFSEELDRFLLENPKTAKIIVEKGLQASRARIAAKKARESTRRKNALEFTNLPGKLA 412
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
DCSS E E+F+VEGDSAGGSAK GR+ +FQ I+ PL+ I
Sbjct: 413 DCSSKDAAECELFLVEGDSAGGSAKLGRNSKFQAIL-PLKGKIL 455
>gi|343524384|ref|ZP_08761342.1| DNA gyrase, B subunit [Streptococcus constellatus subsp. pharyngis
SK1060 = CCUG 46377]
gi|343398033|gb|EGV10566.1| DNA gyrase, B subunit [Streptococcus constellatus subsp. pharyngis
SK1060 = CCUG 46377]
Length = 648
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/466 (48%), Positives = 321/466 (68%), Gaps = 11/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA AG+A++I+V
Sbjct: 10 AQDYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALAGFATHIQVF 69
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++V D+GRGIP+D+ T + A+ETV T+LHAGGKFGG S LHGVG
Sbjct: 70 IEKDNSITVVDDGRGIPVDIQEKTGRPAVETVFTILHAGGKFGGGGYKVSGG--LHGVGS 127
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS L+V V+++G + Q+Y RG+ V L + DR GT + F PD ++F
Sbjct: 128 SVVNALSTQLDVRVYKNGQIHFQEYRRGQVVADLKI----IGETDRTGTTVHFTPDPEIF 183
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T I+FD + R++ELAFLN L I++ + E Q +Y + GG+ YVQ++N +
Sbjct: 184 TETIEFDFEKLNKRVQELAFLNRGLRISITDKREGLE--QTKDYHYEGGIASYVQYINEN 241
Query: 314 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K + + + ++D IT+++A+Q+ + Y +T++ +AN+I T +GGTH +G + +LTR
Sbjct: 242 KDVIFENPIYTDGEMDDITVEVAIQYTT-GYHETVMSFANNIHTHEGGTHEQGFRTALTR 300
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N KK+K +K+ + +L+GE VREGLT +ISV+ PNP+FEGQTKT+LGN EV K+ ++
Sbjct: 301 VINDYAKKNKLLKENEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVVKITNR 360
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E +++L +P V I+ K + A KA +AAKRAR++ R+KS L S+LPGKLADCS
Sbjct: 361 LFSEAFSDFLLENPAVAKKIIEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLADCS 420
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P E+E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 421 SNDPHETELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 465
>gi|15612569|ref|NP_240872.1| DNA gyrase subunit B [Bacillus halodurans C-125]
gi|4033396|sp|O50627.1|GYRB_BACHD RecName: Full=DNA gyrase subunit B
gi|2760177|dbj|BAA24187.1| B subunit of DNA gyrase [Bacillus sp.]
gi|5672652|dbj|BAA82690.1| gyrB [Bacillus halodurans]
gi|10172618|dbj|BAB03725.1| DNA gyrase subunit B [Bacillus halodurans C-125]
Length = 637
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/465 (49%), Positives = 307/465 (66%), Gaps = 12/465 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AG+ I V +
Sbjct: 6 QAYDESQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVWEIVDNSIDEAMAGFCDEIGVVI 65
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DNS++V DNGRGIP+ +H + A+E ++TVLHAGGKFGG S LHGVG S
Sbjct: 66 EEDNSITVTDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGAS 123
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS LEV V R+G ++QK+ RG P L + + DR GT+I F PD +FT
Sbjct: 124 VVNALSTMLEVEVHREGKVHYQKFHRGVPAADLEV----IGTTDRTGTKIHFKPDGDIFT 179
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
F+++T+A R+RELAFLN L I + E+ + +E+ + GG+ +V+ LN +
Sbjct: 180 ETTVFEYDTLASRLRELAFLNKGLRIKITDM---REEEKSDEFHYEGGIASFVEHLNRTR 236
Query: 315 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+ LH+ + + G+ +++A+Q+ +D ++ + +AN+I T +GGTH G K LTR
Sbjct: 237 ETLHETPIHIEGEKQGVYVEIAVQY-NDGFTSNIYSFANNINTHEGGTHESGFKTGLTRV 295
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N +K K+ D +L+GE VREGLT IISV++P+P+FEGQTKT+LGN E R + D
Sbjct: 296 INDYARKHNLFKESDPNLTGEDVREGLTAIISVKIPDPQFEGQTKTKLGNSEARTITDSL 355
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
E+ + +L HP V ++ K L A +A AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 356 FTEHFSRFLIEHPQVARKLVDKGLMASRAREAAKKARELTRRKSALEVSSLPGKLADCSS 415
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SEI+IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 416 RDASISEIYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 459
>gi|262039519|ref|ZP_06012821.1| DNA gyrase, B subunit [Leptotrichia goodfellowii F0264]
gi|261746500|gb|EEY34037.1| DNA gyrase, B subunit [Leptotrichia goodfellowii F0264]
Length = 660
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 235/486 (48%), Positives = 312/486 (64%), Gaps = 35/486 (7%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++ YG+E I+VLEGLEAVRKRP MYIGST RGLHHLV+EI+DN+VDEA AG NI V
Sbjct: 1 MANNYGAENIKVLEGLEAVRKRPGMYIGSTSSRGLHHLVWEIVDNSVDEALAGVCDNIIV 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+L DN + V+DNGRGIP H T KS LE V+TVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 KILKDNVIEVSDNGRGIPFATHE-TGKSTLEVVMTVLHAGGKF--DNDNYKVSGGLHGVG 117
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE LEVTV RDG Q Y RG+PV+ + + S + GT +F D ++
Sbjct: 118 VSVVNALSEWLEVTVTRDGQIVRQTYKRGEPVSDV--EKIGEASPEAHGTTTKFKADPEI 175
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F T + ++ + + R++ELA+LN LTI L E D EK + ++ F GG+ +++ +
Sbjct: 176 FETTV-YEFSVLESRLKELAYLNKGLTITLIDE-RDQEKIKEEKFLFEGGIIDFLNEI-A 232
Query: 313 DKKPLHDVVGFRKD------------VDG-------------ITIDLALQWCSDAYSDTM 347
D++ + D V + D VD + +++A+ + + + +
Sbjct: 233 DEEKITDEVIYMSDTYEVEAAKEVEIVDDNGNTVKKMRAAKFVEVEIAMSYTI-SQRENV 291
Query: 348 LGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVR 407
+ N+I T +GGTH+ G + +LTRT+N + K+ VKDKD + G VREGL C+ISV+
Sbjct: 292 YSFVNNINTHEGGTHVSGFRTALTRTINDIAKQMNIVKDKDGTFQGTDVREGLVCVISVK 351
Query: 408 VPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAK 467
+P P+FEGQTKT+LGN EV +V V L YLE HP + I+ K + +A AAK
Sbjct: 352 IPEPQFEGQTKTKLGNSEVTGIVSNIVGNNLKFYLEDHPKEAEKIIEKMTMSKRAREAAK 411
Query: 468 RARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINP 527
+AR+LV +K+ L SLPGKLADCSS P ESEIFIVEG+SAGGSAKQGRDRRFQ I+ P
Sbjct: 412 KARELVLRKNTLEVGSLPGKLADCSSKDPSESEIFIVEGNSAGGSAKQGRDRRFQAIL-P 470
Query: 528 LQESIF 533
L+ I
Sbjct: 471 LRGKIL 476
>gi|419538287|ref|ZP_14077647.1| DNA gyrase subunit B [Campylobacter coli 90-3]
gi|380518380|gb|EIA44476.1| DNA gyrase subunit B [Campylobacter coli 90-3]
Length = 770
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/466 (45%), Positives = 310/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I++
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD +
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFDI----IGKSKKTGTTIEFWPDDTI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD++ +A R RELA+LNPK+TI + D ++ + F GG+ +++ LN
Sbjct: 175 FEVT-EFDYDILAKRFRELAYLNPKITINFK----DNRVDKSESFHFEGGISQFISDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKPIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++G+ VREGL ++SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDSKITGDDVREGLIAVVSVKVPEPQFEGQTKGKLGSSYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYL++Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLSKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|419597039|ref|ZP_14132029.1| DNA gyrase subunit B [Campylobacter coli LMG 23341]
gi|419598895|ref|ZP_14133767.1| DNA gyrase subunit B [Campylobacter coli LMG 23342]
gi|380574554|gb|EIA96654.1| DNA gyrase subunit B [Campylobacter coli LMG 23341]
gi|380576634|gb|EIA98686.1| DNA gyrase subunit B [Campylobacter coli LMG 23342]
Length = 770
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/466 (46%), Positives = 309/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I++
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD +
Sbjct: 119 VSVVNALSKKLIATVERNGEIYRQEFSEGKVISEFGV----IGKSKKTGTTIEFWPDDTI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD++ +A R RELA+LNPK+TI + D + + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYDILAKRFRELAYLNPKITINFK----DNRVGKSESFHFKGGISQFVSDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + I++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKPIFFSVDEEDVNIEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++G+ VREGL ++SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDSKITGDDVREGLIAVVSVKVPEPQFEGQTKGKLGSSYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYL++Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLSKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|419556538|ref|ZP_14094522.1| DNA gyrase subunit B [Campylobacter coli 84-2]
gi|419565780|ref|ZP_14103050.1| DNA gyrase subunit B [Campylobacter coli 1148]
gi|419573653|ref|ZP_14110446.1| DNA gyrase subunit B [Campylobacter coli 1891]
gi|419586298|ref|ZP_14122261.1| DNA gyrase subunit B [Campylobacter coli 67-8]
gi|419593586|ref|ZP_14128800.1| DNA gyrase subunit B [Campylobacter coli LMG 9854]
gi|419604295|ref|ZP_14138765.1| DNA gyrase subunit B [Campylobacter coli LMG 9853]
gi|380534651|gb|EIA59418.1| DNA gyrase subunit B [Campylobacter coli 84-2]
gi|380548313|gb|EIA72221.1| DNA gyrase subunit B [Campylobacter coli 1148]
gi|380551030|gb|EIA74649.1| DNA gyrase subunit B [Campylobacter coli 1891]
gi|380566160|gb|EIA88842.1| DNA gyrase subunit B [Campylobacter coli 67-8]
gi|380569899|gb|EIA92332.1| DNA gyrase subunit B [Campylobacter coli LMG 9854]
gi|380580372|gb|EIB02126.1| DNA gyrase subunit B [Campylobacter coli LMG 9853]
Length = 770
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/466 (46%), Positives = 309/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I++
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD +
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFDI----IGKSKKTGTTIEFWPDDTI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD++ +A R RELA+LNPK+TI + D + + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYDILAKRFRELAYLNPKITINFK----DNRVGKSESFHFEGGISQFVSDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKPIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++G+ VREGL ++SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDSKITGDDVREGLIAVVSVKVPEPQFEGQTKGKLGSSYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYL++Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLSKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|419609853|ref|ZP_14143930.1| DNA gyrase subunit B [Campylobacter coli H8]
gi|380591233|gb|EIB12219.1| DNA gyrase subunit B [Campylobacter coli H8]
Length = 770
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/466 (46%), Positives = 309/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I++
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD +
Sbjct: 119 VSVVNALSKKLIATVERNGEIYRQEFSEGKVISEFDV----IGKSKKTGTTIEFWPDDTI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD++ +A R RELA+LNPK+TI + D + + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYDILAKRFRELAYLNPKITINFK----DNRVGKSESFHFEGGISQFVSDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKPIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++G+ VREGL ++SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDSKITGDDVREGLIAVVSVKVPEPQFEGQTKGKLGSSYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYL++Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLSKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|222823049|ref|YP_002574622.1| DNA gyrase subunit B [Campylobacter lari RM2100]
gi|222538270|gb|ACM63371.1| DNA gyrase, subunit B [Campylobacter lari RM2100]
Length = 772
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/465 (46%), Positives = 306/465 (65%), Gaps = 14/465 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I V
Sbjct: 4 NQNYNAGNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGFCDTINVE 63
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ + S V+DNGRGIP+ +HP N L VLTVLHAGGKF + Y VSGGLHGVG+
Sbjct: 64 ITTEGSCIVSDNGRGIPVGMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVGV 121
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ L TV RDG Y Q++S GK +T + + + GT I FWPD Q+F
Sbjct: 122 SVVNALSKKLVATVHRDGEIYRQEFSEGK----VTSDFETIGTSKKTGTIIEFWPDDQIF 177
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
FD+ +A R RELA+LNPK+TI + D + + F GG+ ++V LN
Sbjct: 178 EIT-NFDYEILAKRFRELAYLNPKITINFK----DNRIGKAESFHFEGGISQFVTDLNK- 231
Query: 314 KKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
K+ L + F D + + +++AL + +D+YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 232 KQALTKAIFFNVDEEDVNVEVALLY-NDSYSENLLSFVNNIKTPDGGTHEAGFRMGLTRV 290
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+++ + + + ++KD ++GE VREGL ++SV+VP P+FEGQTK +LG+ VR +V ++
Sbjct: 291 ISNYIEANASAREKDSKITGEDVREGLIAVVSVKVPEPQFEGQTKGKLGSSYVRPIVSKA 350
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
EYLT+Y E +P +I++K+L A + AAK+AR+L R+K +LPGKLADC S
Sbjct: 351 SFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKETSSVGTLPGKLADCQS 410
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 411 KDPSESEIYLVEGDSAGGSAKQGRERTFQAIL-PLRGKILNVEKA 454
>gi|423068891|ref|ZP_17057679.1| DNA gyrase subunit B [Streptococcus intermedius F0395]
gi|355366191|gb|EHG13910.1| DNA gyrase subunit B [Streptococcus intermedius F0395]
Length = 648
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/466 (48%), Positives = 321/466 (68%), Gaps = 11/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA AG+A++I+V
Sbjct: 10 AQDYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALAGFATHIQVF 69
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++V D+GRGIP+D+ T + A+ETV T+LHAGGKFGG S LHGVG
Sbjct: 70 IEKDNSITVVDDGRGIPVDIQEKTGRPAVETVFTILHAGGKFGGGGYKVSGG--LHGVGS 127
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS L+V V+++G + Q+Y RG+ V L + DR GT + F PD ++F
Sbjct: 128 SVVNALSAQLDVRVYKNGQIHFQEYRRGQVVADLKI----IGETDRTGTTVHFTPDPEIF 183
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T I+FD + R++ELAFLN L I++ + E Q +Y + GG+ YVQ++N +
Sbjct: 184 TETIEFDFEKLNKRVQELAFLNRGLRISITDKREGLE--QTKDYHYEGGIASYVQYINEN 241
Query: 314 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K + + + ++D IT+++A+Q+ + Y +T++ +AN+I T +GGTH +G + +LTR
Sbjct: 242 KDVIFENPIYTDGEMDDITVEVAIQYTT-GYHETVMSFANNIHTHEGGTHEQGFRTALTR 300
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N KK+K +K+ + +L+GE VREGLT +ISV+ PNP+FEGQTKT+LGN EV K+ ++
Sbjct: 301 VINDYAKKNKLLKENEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVVKITNR 360
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E +++L +P V I+ K + A KA +AAKRAR++ R+KS L S+LPGKLADCS
Sbjct: 361 LFSEAFSDFLLENPAVAKKIIEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLADCS 420
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P E+E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 421 SNDPHETELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 465
>gi|386002763|ref|YP_005921062.1| DNA gyrase subunit B [Methanosaeta harundinacea 6Ac]
gi|357210819|gb|AET65439.1| DNA gyrase, B subunit [Methanosaeta harundinacea 6Ac]
Length = 640
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/467 (49%), Positives = 322/467 (68%), Gaps = 15/467 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
V + Y + IQVLEGL+AVR+RPAMYIGST GLHHLVYE++DN++DEA AG S I +
Sbjct: 12 VVEEYDASTIQVLEGLDAVRRRPAMYIGSTNLAGLHHLVYEVVDNSIDEAMAGRCSEINL 71
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L AD + SV D+GRGIP+D+H K ALE V+T LHAGGKF S Y VSGGLHGVG
Sbjct: 72 VLHADGTASVRDDGRGIPVDIHEHYKKPALEIVMTKLHAGGKFDHKS--YKVSGGLHGVG 129
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALSE +EV V R+ + Y Q+Y RG+PV+ L H + D GT +RF PD ++
Sbjct: 130 VSVVNALSEWMEVEVRRNNLVYWQRYERGRPVSDLEVHGV----SDHTGTTVRFKPDPEI 185
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F A++F +T+A R+RELAFLN L I++ E + + EY + GG+ +V+ LN
Sbjct: 186 FE-AVEFSFDTLASRLRELAFLNRGLKISVEDERTAKRR----EYLYDGGIVSFVEHLNK 240
Query: 313 DKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K LH + F ++ DG ++++ALQ+ ++ Y++ +L +AN+I T +GGTH+ G +A+LT
Sbjct: 241 NKDILHSPPIYFNREKDGTSVEVALQY-NNTYNENVLSFANNINTREGGTHLAGFRAALT 299
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
+T N + +K +KD D L+G+ +REGL +ISVR+ +P+FEGQTKT+LGN V +V
Sbjct: 300 KTTNEYARANKLLKD-DTKLTGDDLREGLVAVISVRLADPQFEGQTKTKLGNSAVGGIVS 358
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E L+E+ E +P V I+ K+ A +A +AA++AR+L R+K+ L S LPGKLADC
Sbjct: 359 SLVSEGLSEFFEENPLVTVKIVEKATQAYRARVAARKARELTRRKNALSSGGLPGKLADC 418
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
+ P+ SE++IVEG+SAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 419 AEKDPQLSELYIVEGESAGGSAKQGRNRHFQAIL-PLRGKILNVERA 464
>gi|57504599|ref|ZP_00370711.1| DNA gyrase, B subunit [Campylobacter coli RM2228]
gi|419535795|ref|ZP_14075287.1| DNA gyrase subunit B [Campylobacter coli 111-3]
gi|419540062|ref|ZP_14079304.1| DNA gyrase subunit B [Campylobacter coli Z163]
gi|419549960|ref|ZP_14088482.1| DNA gyrase subunit B [Campylobacter coli 2688]
gi|419554167|ref|ZP_14092313.1| DNA gyrase subunit B [Campylobacter coli 2698]
gi|419557495|ref|ZP_14095403.1| DNA gyrase subunit B [Campylobacter coli 80352]
gi|419567632|ref|ZP_14104787.1| DNA gyrase subunit B [Campylobacter coli 1417]
gi|419571454|ref|ZP_14108407.1| DNA gyrase subunit B [Campylobacter coli 132-6]
gi|419577418|ref|ZP_14113972.1| DNA gyrase subunit B [Campylobacter coli 59-2]
gi|419585410|ref|ZP_14121464.1| DNA gyrase subunit B [Campylobacter coli 202/04]
gi|419591493|ref|ZP_14126841.1| DNA gyrase subunit B [Campylobacter coli 37/05]
gi|419594342|ref|ZP_14129471.1| DNA gyrase subunit B [Campylobacter coli LMG 23336]
gi|419603197|ref|ZP_14137755.1| DNA gyrase subunit B [Campylobacter coli 151-9]
gi|419614926|ref|ZP_14148693.1| DNA gyrase subunit B [Campylobacter coli H56]
gi|419616286|ref|ZP_14149935.1| DNA gyrase subunit B [Campylobacter coli Z156]
gi|57019494|gb|EAL56188.1| DNA gyrase, B subunit [Campylobacter coli RM2228]
gi|380517754|gb|EIA43861.1| DNA gyrase subunit B [Campylobacter coli Z163]
gi|380519745|gb|EIA45807.1| DNA gyrase subunit B [Campylobacter coli 111-3]
gi|380531736|gb|EIA56746.1| DNA gyrase subunit B [Campylobacter coli 2688]
gi|380533194|gb|EIA58145.1| DNA gyrase subunit B [Campylobacter coli 2698]
gi|380541939|gb|EIA66184.1| DNA gyrase subunit B [Campylobacter coli 80352]
gi|380547776|gb|EIA71692.1| DNA gyrase subunit B [Campylobacter coli 1417]
gi|380553603|gb|EIA77111.1| DNA gyrase subunit B [Campylobacter coli 132-6]
gi|380557427|gb|EIA80641.1| DNA gyrase subunit B [Campylobacter coli 59-2]
gi|380562121|gb|EIA85007.1| DNA gyrase subunit B [Campylobacter coli 202/04]
gi|380568084|gb|EIA90567.1| DNA gyrase subunit B [Campylobacter coli 37/05]
gi|380576299|gb|EIA98356.1| DNA gyrase subunit B [Campylobacter coli LMG 23336]
gi|380579239|gb|EIB01040.1| DNA gyrase subunit B [Campylobacter coli 151-9]
gi|380592096|gb|EIB13018.1| DNA gyrase subunit B [Campylobacter coli H56]
gi|380595953|gb|EIB16671.1| DNA gyrase subunit B [Campylobacter coli Z156]
Length = 770
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/466 (46%), Positives = 309/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I++
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD +
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGV----IGKSKKTGTTIEFWPDDTI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD++ +A R RELA+LNPK+TI + D + + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYDILAKRFRELAYLNPKITINFK----DNRVGKSESFHFEGGISQFVSDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKPIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++G+ VREGL ++SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDSKITGDDVREGLIAVVSVKVPEPQFEGQTKGKLGSSYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYL++Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLSKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|419563726|ref|ZP_14101121.1| DNA gyrase subunit B [Campylobacter coli 1098]
gi|419575228|ref|ZP_14111923.1| DNA gyrase subunit B [Campylobacter coli 1909]
gi|419578926|ref|ZP_14115348.1| DNA gyrase subunit B [Campylobacter coli 1948]
gi|419608446|ref|ZP_14142636.1| DNA gyrase subunit B [Campylobacter coli H6]
gi|380543575|gb|EIA67761.1| DNA gyrase subunit B [Campylobacter coli 1098]
gi|380554104|gb|EIA77591.1| DNA gyrase subunit B [Campylobacter coli 1909]
gi|380558413|gb|EIA81592.1| DNA gyrase subunit B [Campylobacter coli 1948]
gi|380585403|gb|EIB06757.1| DNA gyrase subunit B [Campylobacter coli H6]
Length = 770
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/466 (46%), Positives = 309/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I++
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD +
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGV----IGKSKKTGTTIEFWPDDTI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD++ +A R RELA+LNPK+TI + D + + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYDILAKRFRELAYLNPKITINFK----DNRVGKSESFHFEGGISQFVSDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKPIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++G+ VREGL ++SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDSKITGDDVREGLIAVVSVKVPEPQFEGQTKGKLGSSYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYL++Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLSKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|419600273|ref|ZP_14135034.1| DNA gyrase subunit B [Campylobacter coli LMG 23344]
gi|380583173|gb|EIB04746.1| DNA gyrase subunit B [Campylobacter coli LMG 23344]
Length = 770
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/466 (46%), Positives = 309/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I++
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD +
Sbjct: 119 VSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFDI----IGKSKKTGTTIEFWPDDTI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD++ +A R RELA+LNPK+TI + D + + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYDILAKRFRELAYLNPKITINFK----DNRVGKSESFHFEGGISQFVSDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKPIFFSIDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++G+ VREGL ++SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDSKITGDDVREGLIAVVSVKVPEPQFEGQTKGKLGSSYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYL++Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLSKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|268678647|ref|YP_003303078.1| DNA gyrase subunit beta [Sulfurospirillum deleyianum DSM 6946]
gi|268616678|gb|ACZ11043.1| DNA gyrase, B subunit [Sulfurospirillum deleyianum DSM 6946]
Length = 770
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/458 (48%), Positives = 303/458 (66%), Gaps = 14/458 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
YG++ I+VL+GLEAVRKRP MYIG T GLHHL+YE++DN++DEA AGY +NI+V L
Sbjct: 3 NYGADNIKVLKGLEAVRKRPGMYIGDTNINGLHHLIYEVVDNSIDEAMAGYCTNIKVELT 62
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
+ S + DNGRGIP+ H N SA VLTVLHAGGKF + Y VSGGLHGVG+SV
Sbjct: 63 REGSAIITDNGRGIPVGWHEGENMSAATVVLTVLHAGGKFDKDT--YKVSGGLHGVGVSV 120
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS L T+ R+G E+ Q+++ G PVT L V + +R GT I FWPD +F T
Sbjct: 121 VNALSSKLVATIKREGNEHRQEFACGIPVTPLDV----VKTTNRTGTIIEFWPDATIFET 176
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
+F +A R RELA+LNPK+TI L+ D + Y F GG++++V LN K+
Sbjct: 177 T-EFQFEILATRFRELAYLNPKITIELK----DQRDGRTELYHFEGGIKQFVLDLNK-KE 230
Query: 316 PLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
+ + V + V+ + ID+A+ + S YS+ + + N+I+TIDGGTH G +A LTR +
Sbjct: 231 KVAEAVHYTASVEDVEIDIAMMYNS-TYSEILYSFVNNIKTIDGGTHESGFRAGLTRAIT 289
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+ + V++KD ++G+ VREGL I+SV+VP P+FEGQTK +LG+ V+ +V + V
Sbjct: 290 NYISLNAGVREKDSKITGDDVREGLIAIVSVKVPEPQFEGQTKGKLGSSYVKPIVQKLVY 349
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L +Y E +P +I++K+L A + AAK ARDL R+K + +LPGKLADC S
Sbjct: 350 EQLVKYFEENPIEAKAIMNKALMAARGREAAKNARDLTRRKDAMSIGTLPGKLADCQSKD 409
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P E+++VEGDSAGGSAKQGRDR FQ I+ PL+ I
Sbjct: 410 PSVCELYLVEGDSAGGSAKQGRDRVFQAIL-PLKGKIL 446
>gi|343183581|gb|AEM01130.1| DNA gyrase subunit B [Estrella lausannensis]
Length = 843
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/482 (47%), Positives = 313/482 (64%), Gaps = 23/482 (4%)
Query: 69 KENPVS-KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYA 127
+EN V+ K Y + I VLEGL+AVR+RP MY+G T GLH LVYE++DN +DEA AGY
Sbjct: 17 EENAVAAKEYDASSITVLEGLQAVRERPGMYVGDTSVAGLHQLVYEVVDNCIDEAMAGYC 76
Query: 128 SNIEVALLADNSVSVADNGRGIPIDLHP------ATNKSALETVLTVLHAGGKFGGSSSG 181
+ I V L D S S+ DNGRGIPI H + SALE V+T+LHAGGKF ++
Sbjct: 77 TAIYVNLNKDGSASIEDNGRGIPIQKHEKESIRQGRDVSALEVVMTILHAGGKFDKNT-- 134
Query: 182 YSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQG 241
Y VSGGLHGVG+S VNALS+ V+++G Y ++S+GKP T L + D++G
Sbjct: 135 YKVSGGLHGVGVSCVNALSKKFVAEVFKNGNVYEMEFSKGKPQTPLKV----TGTTDKRG 190
Query: 242 TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG 301
T+I FWPD+ + T A FD++ +A R+RELAFLN + I E S+ EK+ N + +AG
Sbjct: 191 TKITFWPDETIMT-ATNFDYDILAKRLRELAFLNRGINIYFHDERSE-EKDDVN-FCYAG 247
Query: 302 GLEEYVQWLNTDKKPLHD----VVGFRKDVDG-ITIDLALQWCSDAYSDTMLGYANSIRT 356
G+ +V +LN +K+PL + G R+ DG + +++++QW +D +++ + Y N+I T
Sbjct: 248 GINSFVSYLNENKQPLFPTPIYIKGVREGGDGPVEVEISMQW-NDTFNEVVFSYVNNIST 306
Query: 357 IDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQ 416
GGTH G A+LTR LNS K +K+ I ++G+ +REGLT +ISV+VPNP+FEGQ
Sbjct: 307 RHGGTHFSGFSAALTRVLNSYIKAHNILKNDKIGITGDDMREGLTAVISVKVPNPQFEGQ 366
Query: 417 TKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQK 476
TK RLGN +V +V Q V E LT L+ +P + +I K++ A A AA++ARDL +K
Sbjct: 367 TKQRLGNSDVGSIVQQVVGEELTTILDENPSIAKAISEKAILAAHAREAARKARDLTLRK 426
Query: 477 SVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFA 536
S L S+ LPGKL DC P EI+IVEGDSAGGSAK GRDRRFQ I+ P++ I
Sbjct: 427 SALDSARLPGKLTDCQEKDPAFCEIYIVEGDSAGGSAKMGRDRRFQAIL-PIRGKILNVE 485
Query: 537 SA 538
A
Sbjct: 486 KA 487
>gi|171780013|ref|ZP_02920917.1| hypothetical protein STRINF_01800 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281361|gb|EDT46796.1| DNA gyrase, B subunit [Streptococcus infantarius subsp. infantarius
ATCC BAA-102]
Length = 650
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/467 (48%), Positives = 321/467 (68%), Gaps = 11/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++K Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA AG+A++IEV
Sbjct: 11 LAKEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALAGFATHIEV 70
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ DNS++V D+GRGIP+D+ T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 71 FIEKDNSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVG 128
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
SVVNALS L+V+V+RDG ++Q+Y RG V L + DR GT + F PD ++
Sbjct: 129 SSVVNALSTQLDVSVYRDGKIHYQEYRRGHVVDDLKV----IGDTDRHGTTVHFTPDGEI 184
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FT FD + +A RI+ELAFLN L I++ + E+ Q+ Y + GG+ YV+++N
Sbjct: 185 FTETTVFDFDKLAKRIQELAFLNRGLRISITDKREGIEQEQH--YHYEGGISSYVEFINE 242
Query: 313 DKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K + D + ++DGI++++A+Q+ + Y +T++ +AN+I T +GGTH +G + +LT
Sbjct: 243 NKDVIFDKPIYTDGEMDGISVEVAMQYTT-GYHETVMSFANNIHTHEGGTHEQGFRTALT 301
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R +N +++K +K+KD +L+G+ VREGLT +ISV+ PNP+FEGQTKT+LGN EV K+ +
Sbjct: 302 RVINDYARQNKLLKEKDDNLTGDDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVVKITN 361
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+ + +L +P + I+ K + A KA +AAKRAR++ R+KS L S+LPGKLADC
Sbjct: 362 RLFSDAFGRFLLENPQIAKKIVEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLADC 421
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SS +E+FIVEGDSAGGSAK GRDR Q I+ P++ I A
Sbjct: 422 SSNDATMNELFIVEGDSAGGSAKSGRDREHQAIL-PIRGKILNVEKA 467
>gi|335045176|ref|ZP_08538199.1| DNA gyrase, B subunit [Oribacterium sp. oral taxon 108 str. F0425]
gi|333758962|gb|EGL36519.1| DNA gyrase, B subunit [Oribacterium sp. oral taxon 108 str. F0425]
Length = 652
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/466 (49%), Positives = 316/466 (67%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
SK YG++QIQ+LEGLEAVRKRP MYIGST RGLHHLVYEI+DN+VDEA AG+ NI V
Sbjct: 17 SKEYGADQIQILEGLEAVRKRPGMYIGSTSVRGLHHLVYEIVDNSVDEALAGFCDNITVT 76
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++V D+GRGIP+D+ KSALE V TVLHAGGKFGGS GY VSGGLHGVG
Sbjct: 77 IHKDNSITVEDDGRGIPVDIQKKAGKSALEVVFTVLHAGGKFGGS--GYKVSGGLHGVGA 134
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS L+VTV +DG Y +S+GK + + C + +++ GT++ F PD ++F
Sbjct: 135 SVVNALSSFLDVTVCKDGKIYTMSFSKGKVIKEIEC--IGTCTEEEHGTKVHFLPDAEIF 192
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
+I +D +T+ R+RE AFL L I L E + + + + GG++E+V +LN
Sbjct: 193 EESI-YDFDTLKVRLRETAFLTKNLRIKLIDEREEEIREM--TFHYEGGIKEFVTYLNKG 249
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L+ DV+ + + I +++A+Q +D+Y++ + + N+I T +GGTH+ G K +LT+
Sbjct: 250 KEALYPDVIYCEGEKEQILVEVAMQH-NDSYTENIYTFVNNINTPEGGTHLTGFKNALTK 308
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
T N +++K +KD + +LSGE +REGLTCIISV++ +P+FEGQTK +LG E + V
Sbjct: 309 TFNDYARQNKLLKDSEPNLSGEDIREGLTCIISVKIEDPQFEGQTKQKLGTSEAQVAVQG 368
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
V E LT +LE +P V + KS+ A +A AA++ARDL R+KS L LPGKLADCS
Sbjct: 369 IVSEQLTYFLEQNPAVARVMCEKSIMAQRARAAARKARDLTRRKSALDGVGLPGKLADCS 428
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S E EIFIVEGDSA G AK+GR+ Q ++ PL+ + A
Sbjct: 429 SKDAERCEIFIVEGDSALGPAKEGRNPETQAVL-PLRGKVLNVQKA 473
>gi|300726297|ref|ZP_07059750.1| DNA gyrase, B subunit [Prevotella bryantii B14]
gi|299776494|gb|EFI73051.1| DNA gyrase, B subunit [Prevotella bryantii B14]
Length = 658
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/464 (48%), Positives = 310/464 (66%), Gaps = 16/464 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVRKRPAMYIG +GLHHL+ E +DN++DEA AGY ++++V +
Sbjct: 11 YSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGYCTDVQVTVNE 70
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D S++V DNGRGIP+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S V
Sbjct: 71 DGSITVEDNGRGIPVDEHKKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCV 128
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS ++ V+RDG Y Q+Y +GKP+ + V D++GT +FWPD +FTT
Sbjct: 129 NALSTHMKSQVFRDGKIYQQEYEKGKPLYPVKI----VGETDKRGTCQQFWPDPTIFTTT 184
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDK 314
F + IA R+RELA+LN + I L + E + + F GL+E+V++++ +
Sbjct: 185 T-FQWDIIARRMRELAYLNAGIRITLTDLRPNAETGKTRQEVFHAVEGLKEFVRYVDRHR 243
Query: 315 KPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
L DV+ + + G+ I++A+ + +D YS+ + Y N+I TI+GGTH+ G + +LTRT
Sbjct: 244 THLFDDVIYLKTEKQGVPIEVAVMYNTD-YSENIHSYVNNINTIEGGTHLTGFRTALTRT 302
Query: 374 LNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
L + SK ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 303 LKAYADNDSAISKQIEKAKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVAGA 362
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
V Q+V E L++YLE HP +I K + A A +AA++AR+ V++K+V+ LPGKLA
Sbjct: 363 VQQAVGEALSDYLEEHPSEAKAICEKVILAATARIAARKARESVQRKNVMTGGGLPGKLA 422
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
DCS+ P++ EIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 423 DCSNKDPKQCEIFLVEGDSAGGSAKQGRDRYTQAIL-PLRGKIL 465
>gi|448369896|ref|ZP_21556349.1| DNA gyrase subunit B [Natrialba aegyptia DSM 13077]
gi|445650336|gb|ELZ03260.1| DNA gyrase subunit B [Natrialba aegyptia DSM 13077]
Length = 644
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/462 (49%), Positives = 316/462 (68%), Gaps = 12/462 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY I V +
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGYCDEITVTIHE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSVAD+GRGIP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVADDGRGIPVDTHEEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TT 255
NALS LE V RDG Y + G+P + V ++ + GT IRFWPD +F TT
Sbjct: 125 NALSARLETEVKRDGGVYEHTFETGEPAGDME-RVRDMEPGEATGTTIRFWPDTDIFETT 183
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALR--KEDSDPEKNQYNE-YFFAGGLEEYVQWLNT 312
+ F +T++ R+RELAFLN + I LR +E + + ++ E Y + GG+ E+V++LN
Sbjct: 184 DMAF--STLSNRLRELAFLNSGVRITLRDERESATEDGDELAETYEYQGGIREFVEYLNE 241
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+ +H DV+ F + + +++A+Q + ++ +AN+I T +GGTH+ G K +LT
Sbjct: 242 TRSAMHEDVIYFEDEDQNVRVEVAMQ-ATQELQGSIHAFANNINTREGGTHLTGFKTALT 300
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R +N ++ + D + +L GE +REGLT +ISV+ P+P+FEGQTKT+LGN EVR VV+
Sbjct: 301 RVVNDYANENDLLSDIEENLKGEDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGVVE 360
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
++ + L Y E HPD +I+ K++ A KA AA++A +L R+KS L S+SLPGKLADC
Sbjct: 361 GAMHDGLGTYFEEHPDTAQAIVMKAVEAAKARKAAQKAEELTRRKSALDSTSLPGKLADC 420
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
+ PE++E+FI EGDSAGGSAKQ R+ FQ ++ P++ I
Sbjct: 421 QTKDPEKAELFIAEGDSAGGSAKQARNPEFQAVL-PIKGKIL 461
>gi|424787413|ref|ZP_18214179.1| DNA gyrase, B subunit [Streptococcus intermedius BA1]
gi|422113708|gb|EKU17435.1| DNA gyrase, B subunit [Streptococcus intermedius BA1]
Length = 648
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/466 (48%), Positives = 321/466 (68%), Gaps = 11/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA AG+A++I+V
Sbjct: 10 AQDYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALAGFATHIQVF 69
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++V D+GRGIP+D+ T + A+ETV T+LHAGGKFGG S LHGVG
Sbjct: 70 IEKDNSITVVDDGRGIPVDIQEKTGRPAVETVFTILHAGGKFGGGGYKVSGG--LHGVGS 127
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS L+V V+++G + Q+Y RG+ V L + DR GT + F PD ++F
Sbjct: 128 SVVNALSTQLDVRVYKNGQIHFQEYRRGQVVADLKI----IGETDRTGTTVHFTPDPEIF 183
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T ++FD + R++ELAFLN L I++ + E Q +Y + GG+ YVQ++N +
Sbjct: 184 TETVEFDFEKLNKRVQELAFLNRGLRISITDKREGLE--QTKDYHYEGGIASYVQYINEN 241
Query: 314 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K + + + ++D IT+++A+Q+ + Y +T++ +AN+I T +GGTH +G + +LTR
Sbjct: 242 KDVIFENPIYTDGEMDDITVEVAIQYTT-GYHETVMSFANNIHTHEGGTHEQGFRTALTR 300
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N KK+K +K+ + +L+GE VREGLT +ISV+ PNP+FEGQTKT+LGN EV K+ ++
Sbjct: 301 VINDYAKKNKLLKENEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVVKITNR 360
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E +++L +P V I+ K + A KA +AAKRAR++ R+KS L S+LPGKLADCS
Sbjct: 361 LFSEAFSDFLLENPAVAKKIIEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLADCS 420
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P E+E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 421 SNDPHETELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 465
>gi|305432569|ref|ZP_07401730.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Campylobacter coli
JV20]
gi|419546270|ref|ZP_14085029.1| DNA gyrase subunit B [Campylobacter coli 2680]
gi|419559701|ref|ZP_14097355.1| DNA gyrase subunit B [Campylobacter coli 86119]
gi|304444280|gb|EFM36932.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Campylobacter coli
JV20]
gi|380522684|gb|EIA48354.1| DNA gyrase subunit B [Campylobacter coli 2680]
gi|380538008|gb|EIA62535.1| DNA gyrase subunit B [Campylobacter coli 86119]
Length = 770
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/466 (46%), Positives = 309/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+ I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I++
Sbjct: 1 MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ + S V+DNGRGIP+D+HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++S GK ++ + + GT I FWPD +
Sbjct: 119 VSVVNALSKKLIATVERNGEIYRQEFSEGKVISEFGV----IGKSKKTGTTIEFWPDDTI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD++ +A R RELA+LNPK+TI + D + + F GG+ ++V LN
Sbjct: 175 FEVT-EFDYDILAKRFRELAYLNPKITINFK----DNRVGKSESFHFEGGISQFVSDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D + + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KEALTKPIFFSVDEEDVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+++ + + + ++KD ++G+ VREGL ++SV+VP P+FEGQTK +LG+ VR +V +
Sbjct: 288 VISNYIEANASAREKDSKITGDDVREGLIAVVSVKVPEPQFEGQTKGKLGSSYVRPIVSK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYL++Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLSKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERSFQAIL-PLRGKILNVEKA 452
>gi|410994852|gb|AFV96317.1| DNA gyrase subunit B [uncultured Sulfuricurvum sp. RIFRC-1]
Length = 771
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/464 (47%), Positives = 303/464 (65%), Gaps = 13/464 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ YG+ I+VL+GLEAVRKRP MYIG TG RGLHHL+YE++DN++DEA AG+ I V L
Sbjct: 2 ENYGASNIKVLKGLEAVRKRPGMYIGDTGHRGLHHLIYEVVDNSIDEAMAGHCDTITVTL 61
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
+ V+DNGRGIP D+HP SA VLTVLHAGGKF + Y VSGGLHGVG+S
Sbjct: 62 TKTGTAMVSDNGRGIPTDIHPGEGISAATVVLTVLHAGGKFDKDT--YKVSGGLHGVGVS 119
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS L++T++R+G + Q + G P L + ++GT I F+PD +FT
Sbjct: 120 VVNALSSDLKMTIFREGQSFEQNFKCGIPQEPLAVTG----TTRKRGTTIEFFPDPSIFT 175
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
I FD++ +A R RELA+LNP++TI + D N Y + GG+ ++V +N K
Sbjct: 176 ETIIFDYDYLAKRFRELAYLNPRITIVFK----DDRNGASNTYHYEGGISQFVTDVNK-K 230
Query: 315 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+ F + ++ I +D+A+ + +D+Y + M + N+I T +GGTH G +A LTR +
Sbjct: 231 VVVAAPFAFSEKIEDIEMDIAIMY-NDSYDEKMFTFVNNINTPNGGTHEAGFRAGLTRVI 289
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
++ K++ K+KDI LSGE V EGL C++SVRVP P+FEGQTK +LGN VR +V +
Sbjct: 290 SNYNKQNGNAKEKDIPLSGEDVSEGLICVVSVRVPEPQFEGQTKGKLGNTYVRPLVQKVT 349
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E LT+Y E +P +I+ K+L A + AAK+AR+L R+K + +LPGKLADC S
Sbjct: 350 YEKLTKYFEENPIQAKAIIQKALMAARGREAAKKARELTRRKDAMTVGTLPGKLADCQSK 409
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE+++VEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 410 DPAISELYLVEGDSAGGSAKQGRDRVFQAIL-PLKGKILNVEKA 452
>gi|89101114|ref|ZP_01173950.1| DNA topoisomerase IV subunit B [Bacillus sp. NRRL B-14911]
gi|89084169|gb|EAR63334.1| DNA topoisomerase IV subunit B [Bacillus sp. NRRL B-14911]
Length = 640
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 238/466 (51%), Positives = 317/466 (68%), Gaps = 12/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++Y QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGY S I V
Sbjct: 8 EQSYDENQIQVLEGLEAVRKRPGMYIGSTSSKGLHHLVWEIVDNSIDEALAGYCSEINVI 67
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++V D+GRGIP+ +H + A+E ++TVLHAGGKFGG S LHGVG
Sbjct: 68 IEKDNSITVVDDGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGA 125
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS LEV V RDG ++QK+ RG P L + + GT I F PD ++F
Sbjct: 126 SVVNALSTELEVFVRRDGKLHYQKFERGVPAADLKV----IGEAEETGTTIHFKPDGEIF 181
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +++++ +A RIRELAFLN L I + ED E N+ +EYF+ GG++ YV+ LN
Sbjct: 182 TETLEYEYEILANRIRELAFLNRGLKITI--EDKRAE-NKKSEYFYEGGIKSYVEHLNRT 238
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ LH+ + + +GIT+++A+Q+ +D ++ + YAN+I T +GGTH G K +LTR
Sbjct: 239 KEVLHEEPIYIEGEKEGITVEVAIQY-NDGFTGNIYSYANNIHTYEGGTHESGFKTALTR 297
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N +K+ KD D +LSGE VREGLT I+S++ P+P+FEGQTKT+LGN EVR V D
Sbjct: 298 VINDYARKNGIFKDSDANLSGEDVREGLTAIVSIKHPDPQFEGQTKTKLGNSEVRTVTDT 357
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
++ ++L +P V ++ K L A +A LAAK+AR+L R+KS L SSLPGKLADCS
Sbjct: 358 FFSDHFEKFLMENPQVARKVVEKGLMAARARLAAKKARELTRRKSALEVSSLPGKLADCS 417
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 418 SKDPSISELYIVEGDSAGGSAKQGRDRHFQAIL-PLRGKILNVEKA 462
>gi|418312245|ref|ZP_12923755.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21334]
gi|365238593|gb|EHM79425.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21334]
Length = 644
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 243/466 (52%), Positives = 321/466 (68%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANKIEVV 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V R+ + YHQ Y +G P L V + D+ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHRNEIIYHQAYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +++ T+ RIRELAFLN + I LR E D E + + Y + GG++ YV+ LN +
Sbjct: 185 TETTVYNYETLQQRIRELAFLNKGIKITLRDE-RDEENVREDSYHYEGGIKSYVELLNEN 243
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 302
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G SK +K++ LSGE REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 303 VLNSYGLSSKIMKEEKDRLSGEDTREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 362
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P V +++ K + A +A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAREVTRRKSALDVASLPGKLADCS 422
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S +PEE EIF+VEGDSAGGS K GRD R Q I+ PL+ I A
Sbjct: 423 SKSPEECEIFLVEGDSAGGSTKSGRDSRTQAIL-PLRGKILNVEKA 467
>gi|256848502|ref|ZP_05553944.1| DNA gyrase, B subunit [Lactobacillus coleohominis 101-4-CHN]
gi|256714769|gb|EEU29748.1| DNA gyrase, B subunit [Lactobacillus coleohominis 101-4-CHN]
Length = 656
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/476 (47%), Positives = 307/476 (64%), Gaps = 12/476 (2%)
Query: 66 EAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAG 125
+A K+ + Y + QIQVL+GLEAVRKRP MYIGST +GLHHLV+EI+DN +DEA AG
Sbjct: 12 KAEKKAELGSKYDASQIQVLKGLEAVRKRPGMYIGSTTAQGLHHLVWEIVDNGIDEALAG 71
Query: 126 YASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVS 185
+ I V + DNS++V DNGRGIP+D+ T K ALETV TVLHAGGKFG + GY VS
Sbjct: 72 FTDEINVVVEPDNSITVTDNGRGIPVDIQKETGKPALETVFTVLHAGGKFG--NGGYKVS 129
Query: 186 GGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTC--HVLPVDSKDRQGTR 243
GGLHGVG SVVNALS L+V V R G EY+ + G T + LP + + GT
Sbjct: 130 GGLHGVGASVVNALSTELDVRVARQGKEYYMDFQGGHVKTPMKVIKEGLP---ETQHGTI 186
Query: 244 IRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGL 303
+ F PD +F ++ T+ RIRELAFLN L I + + +D + Q E+ + GG+
Sbjct: 187 VHFKPDPDIFRETTVYNIKTLTDRIRELAFLNKGLKITIEDKRNDEDNRQ--EFHYEGGI 244
Query: 304 EEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTH 362
YV++LN + + D + + +GIT++++LQ+ S Y +L + N+I T +GG+H
Sbjct: 245 RHYVEFLNRGHELIFDPPIYVEGEYNGITVEVSLQYTS-GYRCNLLTFTNNIHTYEGGSH 303
Query: 363 IEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLG 422
G K +LTR +N G+KS +K + +LSG+ VREGLT ++S++ PNP+FEGQTKT+L
Sbjct: 304 ETGFKTALTRVINDYGRKSGQLKGNNSTLSGDDVREGLTAVVSIKHPNPQFEGQTKTKLS 363
Query: 423 NPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSS 482
N + R D E + ++ HPD I+ K + A KA +AAKRAR++ R+KS L S
Sbjct: 364 NSDARTATDHIFSETMNRFMMEHPDTAKKIVEKGMLASKARVAAKRAREVTRKKSGLEIS 423
Query: 483 SLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
+LPGKLAD +S P SE+FIVEGDSAGGSAKQGR R Q I+ P++ I A
Sbjct: 424 NLPGKLADNTSKDPSISELFIVEGDSAGGSAKQGRSRLTQAIL-PIRGKILNVEKA 478
>gi|418689258|ref|ZP_13250380.1| DNA gyrase, B subunit [Leptospira interrogans str. FPW2026]
gi|400361403|gb|EJP17369.1| DNA gyrase, B subunit [Leptospira interrogans str. FPW2026]
Length = 639
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/464 (47%), Positives = 311/464 (67%), Gaps = 10/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y + QI++LEGLEAVRKRP MYIG+ GLH +VYE++DN+VDEA AG+ + I++++L
Sbjct: 7 SYSAGQIKILEGLEAVRKRPGMYIGTQDETGLHKMVYEVVDNSVDEAMAGHCTEIKISIL 66
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DN V V DNGRGIP+D+HP S +E V+T+LHAGGKF + Y VSGGLHGVG+SV
Sbjct: 67 PDNIVEVKDNGRGIPVDIHPDKKISTIEVVMTILHAGGKF--ENDAYKVSGGLHGVGVSV 124
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALSE LEV V + G Y QKY RG PV+++ + DS +R GT +RF PD +FTT
Sbjct: 125 VNALSEYLEVEVHQKGKVYTQKYERGIPVSSVQ---IQGDSSER-GTIVRFKPDATIFTT 180
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
+ F + ++ R RELAFLN L + + E NE+ F+GG+ +V+ +N +K
Sbjct: 181 -VDFQFDVLSARFRELAFLNKGLVLVVEDHRRGKENILRNEFQFSGGIVSFVEHINENKH 239
Query: 316 PLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
P+H V+ F ++ D + ++++Q+ S+ Y++ + + N+I GGTH+EG +A+LTRTLN
Sbjct: 240 PMHKVIHFERNKDDVLAEISIQY-SETYTENIFCFTNNINNNLGGTHLEGFRAALTRTLN 298
Query: 376 SLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
KK T+ K LSGE V+EGLT +IS+++P P+F QTK +L N E++ ++
Sbjct: 299 DFLKKDSTLSKKHPTGLSGEDVKEGLTAVISIKIPQPQFNSQTKEKLVNAEIKGIMQTLS 358
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E LT + E +P++ IL K + + KA AA++ARDL R+K+VL LPGKLADCS
Sbjct: 359 SEGLTLFFEENPNITKKILEKCILSAKAREAARKARDLTRRKTVLEGGGLPGKLADCSEK 418
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE+++VEGDSAGGSAKQGRDR Q I+ PL+ I A
Sbjct: 419 DPAHSELYLVEGDSAGGSAKQGRDRNTQAIL-PLKGKILNVEKA 461
>gi|417767171|ref|ZP_12415116.1| DNA gyrase, B subunit [Leptospira interrogans serovar Bulgarica
str. Mallika]
gi|417770211|ref|ZP_12418121.1| DNA gyrase, B subunit [Leptospira interrogans serovar Pomona str.
Pomona]
gi|418684138|ref|ZP_13245327.1| DNA gyrase, B subunit [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|418705137|ref|ZP_13266002.1| DNA gyrase, B subunit [Leptospira interrogans serovar Hebdomadis
str. R499]
gi|418713024|ref|ZP_13273751.1| DNA gyrase, B subunit [Leptospira interrogans str. UI 08452]
gi|418724755|ref|ZP_13283564.1| DNA gyrase, B subunit [Leptospira interrogans str. UI 12621]
gi|421117277|ref|ZP_15577640.1| DNA gyrase, B subunit [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|421124386|ref|ZP_15584643.1| DNA gyrase, B subunit [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421135176|ref|ZP_15595301.1| DNA gyrase, B subunit [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|24753767|gb|AAN64015.1|AF434658_12 DNA gyrase subunit B [Leptospira interrogans]
gi|321401258|gb|ADW83040.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401262|gb|ADW83042.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401266|gb|ADW83044.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401270|gb|ADW83046.1| DNA gyrase subunit B [Leptospira interrogans]
gi|400324101|gb|EJO76401.1| DNA gyrase, B subunit [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|400350290|gb|EJP02554.1| DNA gyrase, B subunit [Leptospira interrogans serovar Bulgarica
str. Mallika]
gi|409947765|gb|EKN97759.1| DNA gyrase, B subunit [Leptospira interrogans serovar Pomona str.
Pomona]
gi|409962076|gb|EKO25818.1| DNA gyrase, B subunit [Leptospira interrogans str. UI 12621]
gi|410010988|gb|EKO69116.1| DNA gyrase, B subunit [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410020594|gb|EKO87394.1| DNA gyrase, B subunit [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410437517|gb|EKP86616.1| DNA gyrase, B subunit [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|410764988|gb|EKR35690.1| DNA gyrase, B subunit [Leptospira interrogans serovar Hebdomadis
str. R499]
gi|410790107|gb|EKR83801.1| DNA gyrase, B subunit [Leptospira interrogans str. UI 08452]
gi|455668938|gb|EMF34110.1| DNA gyrase, B subunit [Leptospira interrogans serovar Pomona str.
Fox 32256]
Length = 639
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/464 (47%), Positives = 311/464 (67%), Gaps = 10/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y + QI++LEGLEAVRKRP MYIG+ GLH +VYE++DN+VDEA AG+ + I++++L
Sbjct: 7 SYSAGQIKILEGLEAVRKRPGMYIGTQDETGLHKMVYEVVDNSVDEAMAGHCTEIKISIL 66
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DN V V DNGRGIP+D+HP S +E V+T+LHAGGKF + Y VSGGLHGVG+SV
Sbjct: 67 PDNIVEVKDNGRGIPVDIHPDKKISTIEVVMTILHAGGKF--ENDAYKVSGGLHGVGVSV 124
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALSE LEV V + G Y QKY RG PV+++ + DS +R GT +RF PD +FTT
Sbjct: 125 VNALSEYLEVEVHQKGKVYTQKYERGIPVSSVQ---IQGDSSER-GTIVRFKPDATIFTT 180
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
+ F + ++ R RELAFLN L + + E NE+ F+GG+ +V+ +N +K
Sbjct: 181 -VDFQFDVLSARFRELAFLNKGLVLVVEDHRRGKENILRNEFQFSGGIVSFVEHINENKH 239
Query: 316 PLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
P+H V+ F ++ D + ++++Q+ S+ Y++ + + N+I GGTH+EG +A+LTRTLN
Sbjct: 240 PMHKVIHFERNKDDVLAEISIQY-SETYTENIFCFTNNINNNLGGTHLEGFRAALTRTLN 298
Query: 376 SLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
KK T+ K LSGE V+EGLT +IS+++P P+F QTK +L N E++ ++
Sbjct: 299 DFLKKDSTLSKKHPTGLSGEDVKEGLTAVISIKIPQPQFNSQTKEKLVNAEIKGIMQTLS 358
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E LT + E +P++ IL K + + KA AA++ARDL R+K+VL LPGKLADCS
Sbjct: 359 SEGLTLFFEENPNITKKILEKCILSAKAREAARKARDLTRRKTVLEGGGLPGKLADCSEK 418
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE+++VEGDSAGGSAKQGRDR Q I+ PL+ I A
Sbjct: 419 DPAHSELYLVEGDSAGGSAKQGRDRNTQAIL-PLKGKILNVEKA 461
>gi|422932975|ref|ZP_16965900.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Fusobacterium
nucleatum subsp. animalis ATCC 51191]
gi|339891873|gb|EGQ80794.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Fusobacterium
nucleatum subsp. animalis ATCC 51191]
Length = 639
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/464 (48%), Positives = 310/464 (66%), Gaps = 10/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y ++ I VLEGLEAVRKRP MYIG+T RGLHHLV+EI+DN+VDEA AGY IEV +L
Sbjct: 6 SYEAQNITVLEGLEAVRKRPGMYIGTTSERGLHHLVWEIVDNSVDEALAGYCDKIEVKIL 65
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DN + V DNGRGIP D+HP KSALE VLTVLHAGGKF + Y VSGGLHGVG+SV
Sbjct: 66 PDNIIEVVDNGRGIPTDIHPKYGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGVSV 123
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALSE LEV V ++G ++QKY RGKP + V+ ++ GT +RF D ++F T
Sbjct: 124 VNALSEWLEVEVRKNGTVHYQKYHRGKPEEDV--KVIGTCDENEHGTTVRFKADGEIFET 181
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
+ +++ T++ R++ELA+LN LTI L D +K + Y F GG+ +++ + D+
Sbjct: 182 LV-YNYFTLSNRLKELAYLNKGLTIILSDLRKDEKKEEI--YKFDGGILDFLNEIVKDET 238
Query: 316 PLHDVVGF-RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+ + F + D + +D+ + + + ++ + + N I T +GGTH++G + +LT+ +
Sbjct: 239 TIIEKPFFVSAEQDNVGVDVTFTYTT-SQNEVIYSFVNDINTHEGGTHVQGFRTALTKVI 297
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +GK +KDKD L G +REG+ IIS ++P P+FEGQTK +LGN EV +V+ V
Sbjct: 298 NDVGKAQGLLKDKDGKLMGNDIREGVVGIISTKIPQPQFEGQTKGKLGNSEVSGIVNTVV 357
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
L +LE +P++ I+ K L++ KA AA++AR+LV +KSVL SLPGKLADC+S
Sbjct: 358 SNSLKIFLEDNPNITKIIIEKILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSK 417
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
EE EIFIVEGDSAGGSAKQGRDR Q I+ PL+ I A
Sbjct: 418 KAEECEIFIVEGDSAGGSAKQGRDRYNQAIL-PLRGKIINVEKA 460
>gi|118445175|ref|YP_879293.1| DNA gyrase subunit B [Clostridium novyi NT]
gi|118135631|gb|ABK62675.1| DNA gyrase, B subunit [Clostridium novyi NT]
Length = 637
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 234/460 (50%), Positives = 320/460 (69%), Gaps = 12/460 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y QIQVLEGLEAVRKRP MYIG+TG RGLHHLVYEI+DN++DEA AG+ NIEV +
Sbjct: 5 QVYDESQIQVLEGLEAVRKRPGMYIGTTGIRGLHHLVYEIVDNSIDEALAGFCQNIEVLI 64
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DN ++V D+GRG+P+ +HP K +E ++TVLHAGGKFGG S LHGVG S
Sbjct: 65 HKDNCITVKDDGRGMPVGIHPKMKKPTVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGAS 122
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS+ V V RDG + Q Y +GK V+ LT V D GT + F PD ++F
Sbjct: 123 VVNALSKECNVEVRRDGHIWSQNYKKGKVVSELTI----VGDTDEHGTSVYFKPDDEIFE 178
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
++FD++T+A R+RELAFLN + I L E E+ +E+ + GG++ +V +LN +K
Sbjct: 179 -EVEFDYSTLAQRLRELAFLNKGIKIILVDEREGNERR--DEFHYEGGIKSFVSFLNRNK 235
Query: 315 KPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+ LH + + + D +++ LQ+ +D Y++ + +AN+I T++GGTH+ G K +LTR
Sbjct: 236 QTLHAEPIYVEGNKDDYLVEVGLQY-NDTYNENIFSFANNIDTVEGGTHLAGFKTALTRV 294
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
LN ++ +K+ D +LSG+ REGLT +ISV++ +P+FEGQTKT+LGN EVR +VD
Sbjct: 295 LNDYARRYGFLKENDKNLSGDDTREGLTAVISVKLTDPQFEGQTKTKLGNTEVRGIVDSI 354
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
V E ++ +LE +PD ++ KSL+A +A AAK+AR+L R+KSVL S+SLPGKLADCSS
Sbjct: 355 VSERVSIFLEENPDTAKIVIEKSLTAARAREAAKKARELTRRKSVLESTSLPGKLADCSS 414
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P E EI++VEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 415 KDPSECEIYLVEGDSAGGSAKQGRDRRFQAIL-PLRGKIM 453
>gi|187934052|ref|YP_001884271.1| DNA gyrase subunit B [Clostridium botulinum B str. Eklund 17B]
gi|187722205|gb|ACD23426.1| DNA gyrase, B subunit [Clostridium botulinum B str. Eklund 17B]
Length = 635
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 239/464 (51%), Positives = 326/464 (70%), Gaps = 21/464 (4%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AGY NIEV
Sbjct: 5 NQKYDENQIQVLEGLEAVRKRPGMYIGSTSARGLHHLVYEIVDNSIDEALAGYCKNIEVK 64
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++ +D+GRG+P+ +HP +KSA+E ++T+LHAGGKF GY VSGGLHGVG
Sbjct: 65 INKDNSITSSDDGRGMPVGMHPKMHKSAVEVIMTILHAGGKF--GGGGYKVSGGLHGVGA 122
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE VTV R+G + Q+YS+GK + L + + + GT I F PD ++F
Sbjct: 123 SVVNALSEQCIVTVKREGHIWKQEYSKGKVLYDLK----QIGNTEESGTTIYFKPDAEIF 178
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
+ FD +T++ R+RELAFLN + I L +D E+N Y++ GG++ +V +LN +
Sbjct: 179 DEVL-FDFDTLSQRLRELAFLNKGINIKLIDSRNDREEN----YYYEGGIKSFVSYLNRN 233
Query: 314 KKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
K PLH V G + D +T++L LQ+ +D Y++ + +AN+I TI+GGTH+ G K +
Sbjct: 234 KTPLHPEPIYVEGIK---DKVTVELGLQY-NDGYTENLFSFANNIDTIEGGTHLVGFKTA 289
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
LTR N K+ +K+ D + SG+ +REGLT +ISV++ +P+FEGQTKT+LGN EV+ +
Sbjct: 290 LTRAFNDYAKRFGFIKENDKNFSGDDIREGLTAVISVKIEDPQFEGQTKTKLGNSEVKGI 349
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
VD V EY+ +LE +P + I+ K+L A +A AA++AR+L R KSVL ++LPGKLA
Sbjct: 350 VDSIVSEYIGIFLEENPGISKIIIDKALMAARAREAARKARELTR-KSVLERTTLPGKLA 408
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
DCSS P E EI+IVEGDSAGGSAKQGRDR+FQ I+ PL+ I
Sbjct: 409 DCSSKDPRECEIYIVEGDSAGGSAKQGRDRKFQAIL-PLRGKIM 451
>gi|390454457|ref|ZP_10239985.1| DNA gyrase subunit B [Paenibacillus peoriae KCTC 3763]
Length = 639
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 242/467 (51%), Positives = 322/467 (68%), Gaps = 19/467 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y + +IQVLEGLEAVRKRP MYIGST +GLHHLV+E++DN++DEA AGY +I+V +
Sbjct: 10 SYDAGEIQVLEGLEAVRKRPGMYIGSTSAKGLHHLVWEVVDNSIDEALAGYCDSIQVVVH 69
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNSV+V DNGRGIP+ H KSALE V+TVLHAGGKFGG VSGGLHGVG+SV
Sbjct: 70 TDNSVTVTDNGRGIPVSEHAKMKKSALEVVMTVLHAGGKFGGGGY--KVSGGLHGVGVSV 127
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS + V V RDG Y Q+Y RG P V + D GT+ F+PD+Q+FT
Sbjct: 128 VNALSSKMVVHVKRDGHVYEQEYHRGVP----QYDVRVIGDTDETGTQTTFYPDEQIFTE 183
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
+D++T+ RIRELAFLN + I+L +D + + + GG+ EYVQ+LN ++
Sbjct: 184 TTVYDYDTLQTRIRELAFLNKGIAISL----TDERTGASDTFHYEGGISEYVQFLNQQRE 239
Query: 316 PLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
LH+ V G R D I +++ALQ+ +D+Y++ + +AN+I T +GGTH G K++LT
Sbjct: 240 ALHEQPIYVEGSR---DMIQVEVALQY-NDSYTENIYSFANNINTHEGGTHESGFKSALT 295
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R +N +K+ +KD + +L+G+ VREGLT IISV++P P+FEGQTKT+LGN EVR +V+
Sbjct: 296 RIINDYARKNGMIKDSNANLTGDDVREGLTAIISVKIPEPQFEGQTKTKLGNSEVRGIVE 355
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
E L E+LE +P V ++ KSL A +A AA++AR+L R+KS L SSLPGKLADC
Sbjct: 356 SLFAEKLQEFLEENPSVSRRVVDKSLQAARAREAARKARELTRRKSALEISSLPGKLADC 415
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SS SE++IVEGDSAGGSAKQGRDR FQ I+ P++ I A
Sbjct: 416 SSKDASISELYIVEGDSAGGSAKQGRDRHFQAIL-PIRGKILNVEKA 461
>gi|418965395|ref|ZP_13517169.1| DNA gyrase, B subunit [Streptococcus constellatus subsp.
constellatus SK53]
gi|383342591|gb|EID20803.1| DNA gyrase, B subunit [Streptococcus constellatus subsp.
constellatus SK53]
Length = 648
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/466 (48%), Positives = 321/466 (68%), Gaps = 11/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA AG+A++I+V
Sbjct: 10 AQDYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALAGFATHIQVF 69
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++V D+GRGIP+D+ T + A+ETV T+LHAGGKFGG S LHGVG
Sbjct: 70 IEKDNSITVVDDGRGIPVDIQEKTGRPAVETVFTILHAGGKFGGGGYKVSGG--LHGVGS 127
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS L+V V+++G + Q+Y RG+ V L + DR GT + F PD ++F
Sbjct: 128 SVVNALSAQLDVRVYKNGQIHFQEYRRGQVVADLKI----IGETDRTGTTVHFTPDPEIF 183
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T ++FD + R++ELAFLN L I++ + E Q +Y + GG+ YVQ++N +
Sbjct: 184 TETVEFDFEKLNKRVQELAFLNRGLRISITDKREGLE--QTKDYHYEGGIASYVQYINEN 241
Query: 314 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K + + + ++D IT+++A+Q+ + Y +T++ +AN+I T +GGTH +G + +LTR
Sbjct: 242 KDVIFENPIYTDGEMDDITVEVAIQYTT-GYHETVMSFANNIHTHEGGTHEQGFRTALTR 300
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N KK+K +K+ + +L+GE VREGLT +ISV+ PNP+FEGQTKT+LGN EV K+ ++
Sbjct: 301 VINDYAKKNKLLKENEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVVKITNR 360
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E +++L +P V I+ K + A KA +AAKRAR++ R+KS L S+LPGKLADCS
Sbjct: 361 LFSEAFSDFLLENPAVAKKIIEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLADCS 420
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P E+E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 421 SNDPHETELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 465
>gi|392428435|ref|YP_006469446.1| DNA gyrase B subunit [Streptococcus intermedius JTH08]
gi|419777414|ref|ZP_14303326.1| DNA gyrase, B subunit [Streptococcus intermedius SK54]
gi|296531195|dbj|BAJ08046.1| DNA gyrase subunit B [Streptococcus intermedius]
gi|383844894|gb|EID82304.1| DNA gyrase, B subunit [Streptococcus intermedius SK54]
gi|391757581|dbj|BAM23198.1| DNA gyrase B subunit [Streptococcus intermedius JTH08]
Length = 648
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/466 (48%), Positives = 321/466 (68%), Gaps = 11/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA AG+A++I+V
Sbjct: 10 AQDYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALAGFATHIQVF 69
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++V D+GRGIP+D+ T + A+ETV T+LHAGGKFGG S LHGVG
Sbjct: 70 IEKDNSITVVDDGRGIPVDIQEKTGRPAVETVFTILHAGGKFGGGGYKVSGG--LHGVGS 127
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS L+V V+++G + Q+Y RG+ V L + DR GT + F PD ++F
Sbjct: 128 SVVNALSTQLDVRVYKNGQIHFQEYRRGQVVADLKI----IGETDRTGTTVHFTPDPEIF 183
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T ++FD + R++ELAFLN L I++ + E Q +Y + GG+ YVQ++N +
Sbjct: 184 TETVEFDFEKLNKRVQELAFLNRGLRISITDKREGLE--QTKDYHYEGGIASYVQYINEN 241
Query: 314 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K + + + ++D IT+++A+Q+ + Y +T++ +AN+I T +GGTH +G + +LTR
Sbjct: 242 KDVIFENPIYTDGEMDDITVEVAIQYTT-GYHETVMSFANNIHTHEGGTHEQGFRTALTR 300
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N KK+K +K+ + +L+GE VREGLT +ISV+ PNP+FEGQTKT+LGN EV K+ ++
Sbjct: 301 VINDYAKKNKLLKENEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVVKITNR 360
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E +++L +P V I+ K + A KA +AAKRAR++ R+KS L S+LPGKLADCS
Sbjct: 361 LFSEAFSDFLLENPAVAKKIIEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLADCS 420
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P E+E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 421 SNDPHETELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 465
>gi|329767180|ref|ZP_08258707.1| DNA gyrase subunit B [Gemella haemolysans M341]
gi|328836847|gb|EGF86494.1| DNA gyrase subunit B [Gemella haemolysans M341]
Length = 638
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/459 (50%), Positives = 311/459 (67%), Gaps = 11/459 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y ++QIQVLEGLEAVR RP MYIGST +GLHHLV+EI+DN++DEA AGY I VA+
Sbjct: 8 QEYNADQIQVLEGLEAVRVRPGMYIGSTSSKGLHHLVWEIVDNSIDEALAGYCDTITVAI 67
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
N + V DNGRGIP+D+ T K ALE +LTVLHAGGKFGG S LHGVG S
Sbjct: 68 EKGNWIRVEDNGRGIPVDIQEQTGKPALEVILTVLHAGGKFGGGGYKVSGG--LHGVGAS 125
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS +LE +V RDG + K+ RG V +T V + DR GT IRF D ++F
Sbjct: 126 VVNALSTNLEASVHRDGKIHTMKFERGDVVQGITV----VGNTDRTGTTIRFKADPEIFQ 181
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
+D++ + RIRELAFLN +TI L+ E EK + +++ GGL EYV+ LN +K
Sbjct: 182 ETTVYDYDILRTRIRELAFLNKGITIILKDEREGQEKEE--TFYYEGGLLEYVEMLNENK 239
Query: 315 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
LH+ + ++DG +++++Q+ + YS +L YAN+I T +GGTH G K +LTR +
Sbjct: 240 DALHEAIYVHGEMDGKEVEISMQYNT-GYSSNVLSYANNINTHEGGTHESGFKTALTRII 298
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
NS GKK+K +KDK+ SL+G+ VREGL IIS++ PNP+FEGQTKT+LGN E+ + ++
Sbjct: 299 NSYGKKNKLIKDKE-SLTGDDVREGLVAIISIKHPNPQFEGQTKTKLGNSEMSTITNKLF 357
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E L +L +P + I+ K L A +A +AAK+AR+ R+K+ L ++LPGKLADCSS
Sbjct: 358 SEELDRFLLENPKIAKIIVEKGLQASRARIAAKKARESTRRKNALEFTNLPGKLADCSSK 417
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
E E+F+VEGDSAGGSAK GR+ +FQ I+ PL+ I
Sbjct: 418 DAAECELFLVEGDSAGGSAKLGRNSKFQAIL-PLKGKIL 455
>gi|404369616|ref|ZP_10974950.1| DNA gyrase subunit B [Clostridium sp. 7_2_43FAA]
gi|226914440|gb|EEH99641.1| DNA gyrase subunit B [Clostridium sp. 7_2_43FAA]
Length = 637
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 244/462 (52%), Positives = 329/462 (71%), Gaps = 16/462 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+++Y QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AG+ + I VA
Sbjct: 6 NQSYDESQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSIDEALAGFCTEISVA 65
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++V DNGRG+P +HP KS +E ++TVLHAGGKF GY VSGGLHGVG
Sbjct: 66 INEDNSITVIDNGRGMPTGIHPKMGKSTVEVIMTVLHAGGKF--GGGGYKVSGGLHGVGA 123
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE EVTV R+G + QKYSRG VT L+ + + GT++ F PD ++F
Sbjct: 124 SVVNALSEWCEVTVSREGDIWQQKYSRGNAVTDLS----KIGKTEEHGTKVSFKPDTEIF 179
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDP-EKNQYNEYFFAGGLEEYVQWLNT 312
++D + +A R+RELAFLN + I L SD E+ + Y + GG++E+V +L+
Sbjct: 180 EET-EYDFDILANRLRELAFLNKGIKIIL----SDAREEGKTEVYHYEGGIKEFVSYLSR 234
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K+ LH D + + DGI ++++LQ+ +D+Y++ + +AN+I TI+GGTH+ G K +LT
Sbjct: 235 NKEVLHQDPIYIEGEKDGIIVEISLQY-NDSYTENLYSFANNIDTIEGGTHLSGFKTALT 293
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R +N GKK +K+ D +LSG+ +REGLT ++SV++ P+FEGQTKT+LGN EVR VVD
Sbjct: 294 RVINDYGKKFNHLKENDKNLSGDDIREGLTAVVSVKISEPQFEGQTKTKLGNSEVRGVVD 353
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V E ++ +LE +P + I+ K+L A +A AA++AR+L R KSVL SSLPGKLADC
Sbjct: 354 SIVGEGVSIFLEENPGIGKIIIDKALMAARARDAARKARELTR-KSVLERSSLPGKLADC 412
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
SS P E EI+IVEGDSAGGSAKQGR+RRFQ I+ PL+ I
Sbjct: 413 SSKDPLECEIYIVEGDSAGGSAKQGRNRRFQAIL-PLRGKIL 453
>gi|237743164|ref|ZP_04573645.1| DNA gyrase subunit B [Fusobacterium sp. 7_1]
gi|289765530|ref|ZP_06524908.1| subunit B [Fusobacterium sp. D11]
gi|336401760|ref|ZP_08582518.1| DNA gyrase, B subunit [Fusobacterium sp. 21_1A]
gi|423137793|ref|ZP_17125436.1| DNA gyrase, B subunit [Fusobacterium nucleatum subsp. animalis
F0419]
gi|229433460|gb|EEO43672.1| DNA gyrase subunit B [Fusobacterium sp. 7_1]
gi|289717085|gb|EFD81097.1| subunit B [Fusobacterium sp. D11]
gi|336160471|gb|EGN63517.1| DNA gyrase, B subunit [Fusobacterium sp. 21_1A]
gi|371959262|gb|EHO76954.1| DNA gyrase, B subunit [Fusobacterium nucleatum subsp. animalis
F0419]
Length = 635
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/464 (48%), Positives = 310/464 (66%), Gaps = 10/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y ++ I VLEGLEAVRKRP MYIG+T RGLHHLV+EI+DN+VDEA AGY IEV +L
Sbjct: 2 SYEAQNITVLEGLEAVRKRPGMYIGTTSERGLHHLVWEIVDNSVDEALAGYCDKIEVKIL 61
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DN + V DNGRGIP D+HP KSALE VLTVLHAGGKF + Y VSGGLHGVG+SV
Sbjct: 62 PDNIIEVVDNGRGIPTDIHPKYGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGVSV 119
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALSE LEV V ++G ++QKY RGKP + V+ ++ GT +RF D ++F T
Sbjct: 120 VNALSEWLEVEVRKNGTVHYQKYHRGKPEEDV--KVIGTCDENEHGTTVRFKADGEIFET 177
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
+ +++ T++ R++ELA+LN LTI L D +K + Y F GG+ +++ + D+
Sbjct: 178 LV-YNYFTLSNRLKELAYLNKGLTIILSDLRKDEKKEEI--YKFDGGILDFLNEIVKDET 234
Query: 316 PLHDVVGF-RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+ + F + D + +D+ + + + ++ + + N I T +GGTH++G + +LT+ +
Sbjct: 235 TIIEKPFFVSAEQDNVGVDVTFTYTT-SQNEVIYSFVNDINTHEGGTHVQGFRTALTKVI 293
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +GK +KDKD L G +REG+ IIS ++P P+FEGQTK +LGN EV +V+ V
Sbjct: 294 NDVGKAQGLLKDKDGKLMGNDIREGVVGIISTKIPQPQFEGQTKGKLGNSEVSGIVNTVV 353
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
L +LE +P++ I+ K L++ KA AA++AR+LV +KSVL SLPGKLADC+S
Sbjct: 354 SNSLKIFLEDNPNITKIIIEKILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSK 413
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
EE EIFIVEGDSAGGSAKQGRDR Q I+ PL+ I A
Sbjct: 414 KAEECEIFIVEGDSAGGSAKQGRDRYNQAIL-PLRGKIINVEKA 456
>gi|336420154|ref|ZP_08600396.1| DNA gyrase, B subunit [Fusobacterium sp. 11_3_2]
gi|336162116|gb|EGN65105.1| DNA gyrase, B subunit [Fusobacterium sp. 11_3_2]
Length = 635
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/464 (48%), Positives = 310/464 (66%), Gaps = 10/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y ++ I VLEGLEAVRKRP MYIG+T RGLHHLV+EI+DN+VDEA AGY IEV +L
Sbjct: 2 SYEAQNITVLEGLEAVRKRPGMYIGTTSERGLHHLVWEIVDNSVDEALAGYCDKIEVKIL 61
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DN + V DNGRGIP D+HP KSALE VLTVLHAGGKF + Y VSGGLHGVG+SV
Sbjct: 62 PDNIIEVVDNGRGIPTDIHPKYGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGVSV 119
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALSE LEV V ++G ++QKY RGKP + V+ ++ GT +RF D ++F T
Sbjct: 120 VNALSEWLEVEVRKNGTVHYQKYHRGKPEEDV--KVIGTCDENEHGTTVRFKADGEIFET 177
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
+ +++ T++ R++ELA+LN LTI L D +K + Y F GG+ +++ + D+
Sbjct: 178 LV-YNYFTLSNRLKELAYLNKGLTIILSDLRKDEKKEEI--YKFDGGILDFLNEIVKDET 234
Query: 316 PLHDVVGF-RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+ + F + D + +D+ + + + ++ + + N I T +GGTH++G + +LT+ +
Sbjct: 235 TIIEKPFFVSAEQDNVGVDVTFTYTT-SQNEVIYSFVNDINTHEGGTHVQGFRTALTKVI 293
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +GK +KDKD L G +REG+ IIS ++P P+FEGQTK +LGN EV +V+ V
Sbjct: 294 NDVGKAQGLLKDKDGKLMGNDIREGVVGIISTKIPQPQFEGQTKGKLGNSEVSGIVNTVV 353
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
L +LE +P++ I+ K L++ KA AA++AR+LV +KSVL SLPGKLADC+S
Sbjct: 354 SNSLKIFLEDNPNITKIIIEKILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSK 413
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
EE EIFIVEGDSAGGSAKQGRDR Q I+ PL+ I A
Sbjct: 414 KAEECEIFIVEGDSAGGSAKQGRDRYNQAIL-PLRGKIINVEKA 456
>gi|325294445|ref|YP_004280959.1| DNA gyrase subunit B [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325064893|gb|ADY72900.1| DNA gyrase, B subunit [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 804
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/467 (48%), Positives = 315/467 (67%), Gaps = 13/467 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + I+VLEGLEAVRKRP MYIG TG GLHHLV+EI+DN+VDEA AGY + I+V
Sbjct: 4 NEKYDASAIKVLEGLEAVRKRPGMYIGDTGSYGLHHLVFEIIDNSVDEALAGYCTEIKVI 63
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++V DNGRGIP+D+HP K A E V+TVLHAGGKF Y SGGLHGVG+
Sbjct: 64 IHEDNSITVEDNGRGIPVDIHPEYGKPAAEIVMTVLHAGGKF--EKKAYKYSGGLHGVGV 121
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE L++ + +DG Y Q Y +G PVT C + ++GT + F PD ++F
Sbjct: 122 SVVNALSEWLKLEIHKDGKVYKQIYEKGNPVTEFAC----IGETKKRGTIVTFKPDPEIF 177
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
+F + +A R+RELAFLN L I L E ++P+K + +++ GG+ E+V+ +N
Sbjct: 178 EVT-EFSWDILANRLRELAFLNKGLKITLIDERTEPQKEE--TFYYEGGIVEFVKKINEK 234
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K PL + + + D I +++ALQ+ S Y++ + + N+I T +GGTH+ G + +LTR
Sbjct: 235 KDPLFPNPIYIAGEKDDILVEVALQYNS-TYTEQVFSFVNNINTREGGTHVSGFRTALTR 293
Query: 373 TLNSLGKKSKTV-KDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
+ +++ + K+ IS++G+ VREGL +ISV+VPNP+FEGQTK +LGN EVR +V
Sbjct: 294 AIIKFIEENNLLPKNAKISVTGDDVREGLVTVISVKVPNPQFEGQTKAKLGNSEVRPIVA 353
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V + L +L PD+ I K ++A +A AAKRAR+L R+KS L SLPGKLADC
Sbjct: 354 SIVYDKLYAFLTERPDIGRKIAEKVITAARAREAAKRARELTRRKSALEEFSLPGKLADC 413
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P+++E+F+VEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 414 SERDPQKTELFLVEGDSAGGSAKQGRDRRFQAIL-PLKGKIINVEKA 459
>gi|374709302|ref|ZP_09713736.1| DNA gyrase subunit B [Sporolactobacillus inulinus CASD]
Length = 639
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/464 (48%), Positives = 315/464 (67%), Gaps = 11/464 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
++Y + QIQVLEGLEAVRKRP MYIG+TG +GLHHLV+EI+DN++DEA AGY S+I+V +
Sbjct: 9 QSYNASQIQVLEGLEAVRKRPGMYIGTTGEKGLHHLVWEIVDNSIDEALAGYCSHIQVII 68
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
+ ++V D+GRGIP+DL + A+E ++TVLHAGGKFGG S LHGVG S
Sbjct: 69 EKEGGITVMDDGRGIPVDLQKKVGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGAS 126
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS + V V+R+G Y+Q+Y RGKP+ L + ++ GT F PD ++F
Sbjct: 127 VVNALSTKMWVKVYRNGHVYYQEYHRGKPLADLKI----IGDSEQTGTTTHFEPDPEIFK 182
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
FD++T+ R+RELAFLN + I++ ED E+ + + Y + GG+ YV++LN K
Sbjct: 183 DTTTFDYDTLRVRVRELAFLNKNIRISI--EDR-REEGKRDTYHYEGGIRSYVEFLNRSK 239
Query: 315 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+ +H+ + + DGI +++A+Q+ S ++ + +AN+I T +GGTH G K +LTR +
Sbjct: 240 EVIHEPIDLEGEKDGIKVEIAMQYNS-GFTGQLYSFANNIHTHEGGTHEYGFKVALTRVI 298
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +K++ +K D +L+G+ VREGLT I+S++ P+P+FEGQTKT+LGN EVR + D
Sbjct: 299 NDYARKNQLIKASDPNLTGDDVREGLTAIVSIKHPDPQFEGQTKTKLGNSEVRAITDTLF 358
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E + YL +PDV I+ K L A +A AAK+AR+L R+KS L SSLPGKLADCSS
Sbjct: 359 SEAFSRYLLENPDVARLIVDKGLIASRARTAAKKARELTRRKSSLEVSSLPGKLADCSSK 418
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SE++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 419 DASISELYIVEGDSAGGSAKQGRDRMFQAIL-PLRGKILNVEKA 461
>gi|119355886|ref|YP_910530.1| DNA gyrase subunit B [Chlorobium phaeobacteroides DSM 266]
gi|119353235|gb|ABL64106.1| DNA gyrase subunit B [Chlorobium phaeobacteroides DSM 266]
Length = 643
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/463 (48%), Positives = 310/463 (66%), Gaps = 15/463 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQ+L+G+E VRKRPAMYIG RGLHHL+YEI+DN++DE G+ I V+L
Sbjct: 12 YIASNIQILDGIEHVRKRPAMYIGDIHTRGLHHLIYEIVDNSIDETLGGFNEYIFVSLNP 71
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV+V D+GRGIP+D+HP KSALE V+TV+ AGGKF S Y VSGGLHGVG SVV
Sbjct: 72 DGSVTVIDHGRGIPVDIHPQKQKSALELVMTVIGAGGKFDKGS--YKVSGGLHGVGASVV 129
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE EV V+RDG Y Q++ RG P +V + D++GT+ F PD +F T
Sbjct: 130 NALSEWCEVEVYRDGKAYFQRFERGVP----QGNVREIGLSDQKGTKTTFKPDNLIFKTT 185
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+F + I R+RELAFLN L+I ++ D E + + GGL+E+V++ + ++
Sbjct: 186 -EFRKDIIIDRMRELAFLNKNLSITVQDADGAQEI-----FHYEGGLKEFVRFTDINRLS 239
Query: 317 L-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
L + + F + D +++ALQ+ +D+Y + + Y N+I T +GGTH+ G + +LTRTLN
Sbjct: 240 LIKEPIYFIGERDTTIVEIALQY-NDSYQENVFSYVNNINTHEGGTHVTGFRKALTRTLN 298
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+K+ +K+ +SL+G+ +EGLT +ISV+V P+FEGQTKT+LGN E + +V+ V
Sbjct: 299 LYAQKNDLLKNLKLSLTGDDFKEGLTAVISVKVEEPQFEGQTKTKLGNSETQSIVESIVN 358
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L+E+ E +P+V+ I+ K A + AA++A++L R+KSVL SS LPGKLADCS
Sbjct: 359 ELLSEFAESNPNVIKMIIEKVKGAAMSREAARKAKELTRRKSVLESSGLPGKLADCSIND 418
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
PE E++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 419 PEHCELYIVEGDSAGGSAKQGRDRSFQAIL-PLKGKILNVEKA 460
>gi|330507223|ref|YP_004383651.1| DNA gyrase subunit B [Methanosaeta concilii GP6]
gi|328928031|gb|AEB67833.1| DNA gyrase, B subunit [Methanosaeta concilii GP6]
Length = 630
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 233/463 (50%), Positives = 320/463 (69%), Gaps = 15/463 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + IQVLEGLEAVR+RP+MYIGST GLHHLVYE++DN+VDEA G+ S I+V +
Sbjct: 7 YDASHIQVLEGLEAVRRRPSMYIGSTDSLGLHHLVYEVVDNSVDEALGGFCSEIDVTINP 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
SVS+ D+GRGIP+D HP N+ ALE VLTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 GGSVSIRDDGRGIPVDNHPQFNRPALEIVLTVLHAGGKFDHES--YGVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE +EV V R+G Y Q++ +GK V+ L S D GT I F PD +F
Sbjct: 125 NALSEWMEVQVRRNGRIYWQRFEKGKVVSDLEER----GSSDHTGTTITFKPDTSIFEET 180
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+F +T++ R+RELAFLN L I ++ + SD E N + +AGG+ +V++LN +K+
Sbjct: 181 -EFSFDTLSSRLRELAFLNRGLKITIKDDRSDKE----NIFQYAGGIISFVEYLNKNKEV 235
Query: 317 LHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LH+ V F + +G +++ALQ+ +++Y++ + YAN I T +GGTH+ G +A+LTRT+N
Sbjct: 236 LHEQPVYFSRSKNGTQVEVALQY-NNSYAENIFSYANIINTREGGTHLMGFRAALTRTVN 294
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+ +K K+ ++ L GE +REGL +ISV++P+P+FEGQTKTRLGN +R +V+ V
Sbjct: 295 DYARNNKLFKN-EMKLGGEDLREGLVAVISVKLPDPQFEGQTKTRLGNSSIRGIVESMVA 353
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L EY E +P V +I+ K+ A++A AA++A++L R+K+ L S LPGKLADCS
Sbjct: 354 EGLGEYFEENPLVATTIVEKAAEAMRAREAARKAKELTRRKNALSSGGLPGKLADCSDND 413
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P + EI+IVEG+SAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 414 PAKCEIYIVEGESAGGSAKQGRNRHFQAIL-PLRGKILNVERA 455
>gi|312864604|ref|ZP_07724835.1| DNA gyrase, B subunit [Streptococcus downei F0415]
gi|311099731|gb|EFQ57944.1| DNA gyrase, B subunit [Streptococcus downei F0415]
Length = 650
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/467 (49%), Positives = 321/467 (68%), Gaps = 11/467 (2%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA AG+AS+IEV
Sbjct: 11 LAQEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALAGFASHIEV 70
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ D+S++V D+GRGIP+D+ T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 71 FIEEDDSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVG 128
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
SVVNALS SLEV V ++G + Q+Y RG V L + D+ GT + F PD ++
Sbjct: 129 SSVVNALSTSLEVKVHKNGKIHFQEYKRGLVVADLKV----IGDTDKTGTTVHFTPDPEI 184
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
FT +FD + +A RI+ELAFLN L I++ + E++Q Y + GG+ YV +LN
Sbjct: 185 FTETTEFDFDKLAKRIQELAFLNKGLKISISDKREGKEQSQV--YHYEGGIVSYVDYLNE 242
Query: 313 DKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+K+ L + + ++DGI++++A+Q+ Y + +L +AN+I T +GGTH +G + +LT
Sbjct: 243 NKEVLFENPIYTDGEMDGISVEVAMQYTG-TYHENVLSFANNIHTHEGGTHEQGFRTALT 301
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R +N +++K +K+KD +LSGE VREGLT IISV+ PNP+FEGQTKT+LGN EV K+ +
Sbjct: 302 RVINDYARQNKLLKEKDDNLSGEDVREGLTAIISVKHPNPQFEGQTKTKLGNSEVVKITN 361
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
+ E + +L +P + I+ K + A KA +AAKRAR++ R+KS L S+LPGKLADC
Sbjct: 362 RLFSEAFSRFLLENPQIAKKIVEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLADC 421
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SS ++E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 422 SSNDASQNELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 467
>gi|443242346|ref|YP_007375571.1| DNA gyrase subunit B [Nonlabens dokdonensis DSW-6]
gi|442799745|gb|AGC75550.1| DNA gyrase subunit B [Nonlabens dokdonensis DSW-6]
Length = 645
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/466 (46%), Positives = 309/466 (66%), Gaps = 11/466 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
YG++QIQ LEG+E VR RP+MYIG G RGLHHLVYE++DN++DEA AG+ NI V +
Sbjct: 8 NYGADQIQALEGMEHVRMRPSMYIGDVGIRGLHHLVYEVVDNSIDEALAGHCDNITVIIN 67
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V D+GRGIP+D+H SAL+ V+T + AGGKF S Y VSGGLHGVG+S
Sbjct: 68 KDNSITVTDDGRGIPVDIHKKEGVSALQVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSC 125
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS+ L+ TV+RDG + Q+Y RGK + V + D++GT + F PD+ +F
Sbjct: 126 VNALSDHLKATVYRDGKIWEQEYERGKAMYP----VRAIGDTDKRGTDVTFTPDRSIFKQ 181
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRK-EDSDPEKNQYNEYFFAG-GLEEYVQWLNTD 313
I++++ T+A R+REL+FLN + I L D E N E F + GL+E++++L+
Sbjct: 182 TIEYNYETLANRLRELSFLNKGIKIILTDARHQDEEGNNITEVFQSEEGLKEFIRFLDDT 241
Query: 314 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
+ P+ DV+ + +GI +++A+ + +D+YS+ + Y N+I T +GGTH+ G + LT
Sbjct: 242 RSPIIEDVIAMEGEKNGIPVEVAMIY-NDSYSENLHSYVNNINTHEGGTHLAGFRRGLTS 300
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
TL S + +SG+ REGLT IISV+V P+FEGQTKT+LGN EV V Q
Sbjct: 301 TLKKYADGSGLLDKLKFDVSGDDFREGLTAIISVKVQEPQFEGQTKTKLGNREVTSAVSQ 360
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+V + L +YLE HP+ +I+ K + A A AA++AR++V++K+V+ LPGKL+DCS
Sbjct: 361 AVSQMLEDYLEEHPNDAKTIVQKVILAATARHAARKAREMVQRKTVMSGGGLPGKLSDCS 420
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
T P E+F+VEGDSAGG+AKQGRDR FQ I+ PL+ I A
Sbjct: 421 ETDPTLCEVFLVEGDSAGGTAKQGRDREFQAIL-PLRGKILNVEKA 465
>gi|418905552|ref|ZP_13459579.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|377764852|gb|EHT88702.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
CIGC345D]
Length = 644
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 243/466 (52%), Positives = 320/466 (68%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V R+ YHQ Y +G P L V + D+ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +++ T+ RIRELAFLN + I LR E D E + + Y + GG++ YV+ LN +
Sbjct: 185 TETTVYNYETLQQRIRELAFLNKGIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNEN 243
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 302
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G SK +K++ LSGE REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 303 VLNSYGLSSKIMKEEKDRLSGEDTREGMTAIISIKHDDPQFEGQTKTKLGNSEVRQVVDK 362
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P V +++ K + A +A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAREVTRRKSALDVASLPGKLADCS 422
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S +PEE EIF+VEGDSAGGS K GRD R Q I+ PL+ I A
Sbjct: 423 SKSPEECEIFLVEGDSAGGSTKSGRDSRTQAIL-PLRGKILNVEKA 467
>gi|346312117|ref|ZP_08854110.1| DNA gyrase [Collinsella tanakaei YIT 12063]
gi|345899037|gb|EGX68892.1| DNA gyrase [Collinsella tanakaei YIT 12063]
Length = 673
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/472 (48%), Positives = 318/472 (67%), Gaps = 31/472 (6%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG +I+VLEGLEAVR RP MYIGST GLHHLV+EI+DNAVDEA AG+ S IEV +
Sbjct: 7 YGGGEIKVLEGLEAVRVRPGMYIGSTSSTGLHHLVWEIVDNAVDEAMAGFCSKIEVTVHG 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNS++V DNGRGIP+D+HP LE V+T+LHAGGKF +S Y VSGGLHGVG+SVV
Sbjct: 67 DNSITVVDNGRGIPVDMHPVKKIPTLEVVMTILHAGGKF--DNSAYKVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS+ + V V RDG Y ++SRGK T + V + D GT + FWPD+++F T
Sbjct: 125 NALSKKMVVQVARDGKIYEMQFSRGKT----TQKMEEVGTSDHTGTTVTFWPDEEIFETT 180
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKE-DSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
+ +D++ + R+++ AFLN L I L E + P E+ +AGG+ ++V++L+ K
Sbjct: 181 V-YDYDILHDRLQQTAFLNKNLKIVLTDERELSP---HAEEFCYAGGIIDFVKFLSQGK- 235
Query: 316 PLHDVVGFRKD---VDGIT-----------IDLALQWCSDAYSDTMLGYANSIRTIDGGT 361
D+ KD + G + +++A+QW S +YS+T++ +AN IRTI+GG
Sbjct: 236 ---DIPDGLKDPIYLSGASEPDAPVERTGEVEVAIQWNS-SYSETVMSFANDIRTIEGGM 291
Query: 362 HIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 421
H+EG +A+LT +N +K+ +K+KD +L+G+ VREGLT ++SV++ +P+FEGQTK +L
Sbjct: 292 HMEGFRAALTSVINDYARKNSILKEKDGNLTGDDVREGLTAVVSVKLADPQFEGQTKAKL 351
Query: 422 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 481
G+ +R +V + V + L +YLE HP I+ K+ A KA AA++AR+ R+KS+L +
Sbjct: 352 GSSFMRGLVRKIVSDGLADYLEEHPKQAREIIKKAQQASKARNAARKAREATRRKSLLET 411
Query: 482 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
+SLPGKLADCS E +E+FIVEGDSAGGSAK GR R Q I+ PL+ I
Sbjct: 412 ASLPGKLADCSVRDAEMTELFIVEGDSAGGSAKDGRRRDIQAIL-PLRGKIL 462
>gi|374338384|ref|YP_005095096.1| DNA gyrase subunit B [Streptococcus macedonicus ACA-DC 198]
gi|372284496|emb|CCF02771.1| DNA gyrase subunit B [Streptococcus macedonicus ACA-DC 198]
Length = 650
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/469 (48%), Positives = 326/469 (69%), Gaps = 15/469 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
++K Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA AG+A++IEV
Sbjct: 11 LAKEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALAGFATHIEV 70
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
+ D+S++V D+GRGIP+D+ T + A+ETV TVLHAGGKFGG S LHGVG
Sbjct: 71 FIEKDDSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVG 128
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
SVVNALS L+V+V R+G Y+Q+Y RG V+ L + DR GT + F PD ++
Sbjct: 129 SSVVNALSTQLDVSVHRNGKIYYQEYRRGHVVSDLAV----IGDTDRHGTTVHFTPDPEI 184
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIAL--RKEDSDPEKNQYNEYFFAGGLEEYVQWL 310
FT FD + +A RI+ELAFLN L I++ ++E + EK+ Y + GG+ YV+++
Sbjct: 185 FTETTVFDFDKLAKRIQELAFLNRGLRISITDKREGIEQEKH----YHYEGGISSYVEFI 240
Query: 311 NTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKAS 369
N +K+ + + + ++DGI++++A+Q+ + +Y +T++ +AN+I T +GGTH +G + +
Sbjct: 241 NENKEVIFENPIYTDGELDGISVEVAMQYTT-SYHETVMSFANNIHTHEGGTHEQGFRTA 299
Query: 370 LTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
LTR +N +++K +K+KD +L+GE VREGLT +ISV+ PNP+FEGQTKT+LGN EV K+
Sbjct: 300 LTRVINDYARQNKLLKEKDDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVVKI 359
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
++ E + +L +P + I+ K + A KA +AAKRAR++ R+KS L S+LPGKLA
Sbjct: 360 TNRLFSEAFSRFLLENPQIAKKIVEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLA 419
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
DCSS +E+FIVEGDSAGGSAK GRDR Q I+ P++ I A
Sbjct: 420 DCSSNDATMNELFIVEGDSAGGSAKSGRDREHQAIL-PIRGKILNVEKA 467
>gi|82749782|ref|YP_415523.1| DNA gyrase subunit B [Staphylococcus aureus RF122]
gi|82655313|emb|CAI79693.1| DNA gyrase subunit B [Staphylococcus aureus RF122]
Length = 644
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 243/466 (52%), Positives = 320/466 (68%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V R+ YHQ Y +G P L V + D+ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +++ T+ RIRELAFLN + I LR E D E + + Y + GG++ YV+ LN +
Sbjct: 185 TETTVYNYETLQQRIRELAFLNKGIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNEN 243
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 302
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G SK +K++ LSGE REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 303 VLNSYGLSSKIMKEEKDRLSGEDTREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 362
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P V +++ K + A +A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAREVTRRKSALDVASLPGKLADCS 422
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S +PEE EIF+VEGDSAGGS K GRD R Q I+ PL+ I A
Sbjct: 423 SKSPEECEIFLVEGDSAGGSTKSGRDSRTQAIL-PLRGKILNVEKA 467
>gi|333922243|ref|YP_004495823.1| DNA gyrase subunit B [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|333747804|gb|AEF92911.1| DNA gyrase, B subunit [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 636
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 240/466 (51%), Positives = 318/466 (68%), Gaps = 18/466 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y ++QIQVLEGLEAVR+RP MYIGST RGLHHLVYE++DN++DEA AG+ + I V +
Sbjct: 8 YSADQIQVLEGLEAVRRRPGMYIGSTSSRGLHHLVYEVVDNSIDEALAGFCNRISVVIHK 67
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNSV+V DNGRGIP+DLHP K A+E VLT+LHAGGKFGG S LHGVG+SVV
Sbjct: 68 DNSVTVEDNGRGIPVDLHPKVGKPAVEVVLTMLHAGGKFGGGGYKVSGG--LHGVGVSVV 125
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE LEV + R+G YHQ YSRG PV+ L + GT++ F PD ++F
Sbjct: 126 NALSEKLEVEIKRNGNIYHQAYSRGVPVSELKI----IGKSKSTGTKVTFKPDPEIFEET 181
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
F T+A R+RELA+LN + I ++ E DP Q + F GG+ ++V+ LN +K+
Sbjct: 182 T-FSLETLAQRLRELAYLNKGVKITIKDERKDPPVEQ--TFQFDGGIRDFVKHLNRNKQV 238
Query: 317 LHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
LH V G ++ I +++ALQ+ +D Y++ +L +AN+I T+DGGTH G K +LTR
Sbjct: 239 LHSKPIYVTGEKEQ---IIVEIALQY-NDTYNENILSFANNIHTVDGGTHEIGFKTALTR 294
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N G+ +K+ D +LSGE +REG T +ISV+V P+FEGQTKT+LGN EVR +VD
Sbjct: 295 VVNDYGRNHNLLKNNDPNLSGEDIREGATVVISVKVREPQFEGQTKTKLGNSEVRGIVDS 354
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ L YLE +P V I+ K+++A +A AA++AR+L R+KS L + SLPGKLADCS
Sbjct: 355 IFADGLATYLEENPTVGKRIIEKAITAARAREAARKARELTRRKSALDTMSLPGKLADCS 414
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE+++VEGDSAGGSAKQGRDRRFQ I+ PL+ I A
Sbjct: 415 EKDPSVSELYLVEGDSAGGSAKQGRDRRFQAIL-PLRGKILNVEKA 459
>gi|421144701|ref|ZP_15604609.1| DNA gyrase subunit B [Fusobacterium nucleatum subsp. fusiforme ATCC
51190]
gi|395488928|gb|EJG09775.1| DNA gyrase subunit B [Fusobacterium nucleatum subsp. fusiforme ATCC
51190]
Length = 635
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/468 (48%), Positives = 311/468 (66%), Gaps = 18/468 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y ++ I VLEGLEAVRKRP MYIG+T RGLHHLV+EI+DN+VDEA AGY IEV +L
Sbjct: 2 SYEAQNITVLEGLEAVRKRPGMYIGTTSERGLHHLVWEIVDNSVDEALAGYCDKIEVKIL 61
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DN + V DNGRGIP D+HP KSALE VLTVLHAGGKF + Y VSGGLHGVG+SV
Sbjct: 62 PDNIIEVIDNGRGIPTDIHPKYGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGVSV 119
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALSE LEV V ++G ++QKY RGKP + V+ ++ GT +RF D ++F T
Sbjct: 120 VNALSEWLEVEVRKNGTIHYQKYHRGKPEEDV--KVIGACDENEHGTIVRFKADAEIFET 177
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD-- 313
I +++ T++ R++ELA+LN LTI L D +K + Y F GG+ +++ + D
Sbjct: 178 LI-YNYFTLSNRLKELAYLNKGLTITLSDLRKDEKKEE--TYKFDGGILDFLNEIVKDDT 234
Query: 314 ---KKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 370
+KP + + D + +D+ + + + ++ + + N+I T +GGTH++G + +L
Sbjct: 235 TIIEKPFY----VSSEQDNVGVDVTFTYTT-SQNEVIYSFVNNINTHEGGTHVQGFRTAL 289
Query: 371 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
T+ +N +GK +KDKD L G +REG+ I+S ++P P+FEGQTK +LGN EV +V
Sbjct: 290 TKVINDVGKAQGLLKDKDGKLMGNDIREGVVGIVSTKIPQPQFEGQTKGKLGNSEVSGIV 349
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
+ V L +LE +P++ I+ K L++ KA AA++AR+LV +KSVL SLPGKLAD
Sbjct: 350 NTIVSNSLKIFLEDNPNITKIIIEKILNSKKAREAAQKARELVLRKSVLEVGSLPGKLAD 409
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
C+S EE EIFIVEGDSAGGSAKQGRDR Q I+ PL+ I A
Sbjct: 410 CTSKKAEECEIFIVEGDSAGGSAKQGRDRYNQAIL-PLRGKIINVEKA 456
>gi|31071483|dbj|BAC76790.1| DNA gyrase B subunit [Hapalosiphon delicatulus]
Length = 396
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/401 (56%), Positives = 294/401 (73%), Gaps = 9/401 (2%)
Query: 102 TGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSA 161
TGPRGLHHLVYE++DN++D A AGY +++EV L AD SV+V D+GRGIP + T KS
Sbjct: 1 TGPRGLHHLVYEVVDNSIDXALAGYCTHVEVDLNADGSVTVTDDGRGIPTGIVAKTGKSG 60
Query: 162 LETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG 221
LETVLTVLHAGGKFGG S LHGVG+SVVNALSE +E TVWRD + Q+Y RG
Sbjct: 61 LETVLTVLHAGGKFGGGGYEVSGG--LHGVGVSVVNALSEWVEATVWRDQKVHTQRYERG 118
Query: 222 KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIA 281
PVT L +R GT + F PD Q+FTT +FD+ T+A R+RELA+LN + I
Sbjct: 119 IPVTELNAKPY---KDNRTGTSVTFQPDSQIFTTGTEFDYTTLASRLRELAYLNAGVKIT 175
Query: 282 L---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQ 337
R + ++ + Y + GG+ EY+ ++N DK+PLH+ V+ + + + + +++ALQ
Sbjct: 176 FTDHRLQLLKSDQPKVETYEYKGGIREYITYINADKQPLHEEVIYVQGERNNVQVEVALQ 235
Query: 338 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 397
WC+DAY+D +LG+AN+IRT+DGGTH+EG+KA LTRTLN++ +K +KD + +LSGEHVR
Sbjct: 236 WCTDAYTDNVLGFANNIRTVDGGTHLEGLKAVLTRTLNAIARKRNKIKDSEPNLSGEHVR 295
Query: 398 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 457
EGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE HP V D+IL K++
Sbjct: 296 EGLTGLISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGETLTEYLEFHPSVADAILDKAI 355
Query: 458 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEE 498
A KAA AA+ AR+LVR+KSVL SS LPGKLADCSS P+E
Sbjct: 356 QAFKAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPKE 396
>gi|298529211|ref|ZP_07016614.1| DNA gyrase, B subunit [Desulfonatronospira thiodismutans ASO3-1]
gi|298510647|gb|EFI34550.1| DNA gyrase, B subunit [Desulfonatronospira thiodismutans ASO3-1]
Length = 800
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 235/462 (50%), Positives = 321/462 (69%), Gaps = 17/462 (3%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
S Y ++ IQVLEGL AVRKRPAMYIGST RGL HLVYE+LDN++DEA AGY N+ +
Sbjct: 10 SGEYTAQSIQVLEGLTAVRKRPAMYIGSTDVRGLQHLVYEVLDNSIDEAMAGYCDNVRIT 69
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNSV+++DNGRGIP+D H N+ ALE V+TVLHAGGKF +S Y VSGGLHGVG+
Sbjct: 70 VHMDNSVTISDNGRGIPVDWHEKENRPALEVVMTVLHAGGKFDNAS--YKVSGGLHGVGV 127
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE LEVTV R+G +Y QK+ RG PVT L H P S+ GT I+F PD+++F
Sbjct: 128 SVVNALSEYLEVTVRREGEKYFQKFERGIPVTKLR-HEGPSSSR---GTTIKFRPDEEIF 183
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNT 312
+T + FD++T++ R ELA+LN L I + E + Q ++ F F GGL +++ +N
Sbjct: 184 ST-LDFDYDTLSKRFEELAYLNSGLRIEFQDE-----RYQKSDVFQFDGGLLSFIKNVNK 237
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
D LH V+ +V ++++L LQ+ + Y + + +AN+IRT++GGTH+ G++++LTR
Sbjct: 238 DS-GLHKVIYASGEVHNVSMELTLQYKT-GYKEHIYSFANNIRTVEGGTHLNGLRSALTR 295
Query: 373 TLNSLGKKSKTVKDK-DISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
+N+ + ++ + K L+G+ VREGLT IISV+VP+P+FEGQTKT+LGN E+ V
Sbjct: 296 AINTYIQHAQDLPRKLKQKLTGDDVREGLTSIISVKVPDPQFEGQTKTKLGNSEISGYVS 355
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
E +T +L +P I+ K + A +A AA++A++LVR+K L SLPGKLADC
Sbjct: 356 GIAYEKITTFLNENPKDARIIVEKVVDAARAREAARKAKELVRRKGALSDYSLPGKLADC 415
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
S P ESEIFIVEGDSAGGSAKQGR+ + Q I+ PL+ I
Sbjct: 416 QSKNPSESEIFIVEGDSAGGSAKQGRNPKHQAIL-PLRGKIL 456
>gi|193211690|ref|YP_001997643.1| DNA gyrase subunit B [Chlorobaculum parvum NCIB 8327]
gi|193085167|gb|ACF10443.1| DNA gyrase, B subunit [Chlorobaculum parvum NCIB 8327]
Length = 647
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/463 (48%), Positives = 304/463 (65%), Gaps = 15/463 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ IQVL+G+E VRKRPAMYIG RGLHHLVYEI+DN++DE AG+ I VA+
Sbjct: 16 YGATNIQVLDGIEHVRKRPAMYIGDIHSRGLHHLVYEIVDNSIDETLAGFNDYIHVAMNP 75
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV+V D GRGIP+D+HP KSALE V+TV+ AGGKF Y VSGGLHGVG SVV
Sbjct: 76 DGSVTVTDRGRGIPVDIHPVKKKSALELVMTVIGAGGKF--DKGAYKVSGGLHGVGASVV 133
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE E V+RDG + Q Y RG P V V + D++GT++ F PD +F
Sbjct: 134 NALSEWCEAEVYRDGKIFRQTYKRGVP----QGGVEEVGTTDQKGTKVTFKPDPDIFKIT 189
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK-K 315
+F + I R+RELAFLN L I ++ + E + F GGL E+V++ + ++
Sbjct: 190 -EFRKDIIIDRMRELAFLNSNLRIIVQDAEGFEET-----FHFEGGLREFVRFTDANRLS 243
Query: 316 PLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
L + + + + +++ALQ+ +D+Y + + Y N+I T +GGTH+ G + +LTRTLN
Sbjct: 244 LLKEPIFLSGERESTMVEIALQY-NDSYQENVFSYVNNINTHEGGTHVTGFRKALTRTLN 302
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+ +K+ +K+ I+L+G+ +EGLT +ISV+VP P+FEGQTKT+LGN E + +V+ V
Sbjct: 303 AYAQKNDLLKNVKITLTGDDFKEGLTAVISVKVPEPQFEGQTKTKLGNSETQSIVETIVN 362
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L E+ E +P L I+ K A + AA++A++L R+KSVL SS LPGKLADCS
Sbjct: 363 EQLAEFAESNPGTLKLIIEKVKGAAISREAARKAKELTRRKSVLESSGLPGKLADCSIND 422
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P+ E++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 423 PDHCELYIVEGDSAGGSAKQGRDRSFQAIL-PLKGKILNVEKA 464
>gi|31071477|dbj|BAC76787.1| DNA gyrase B subunit [Fischerella major NIES-592]
Length = 396
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/401 (56%), Positives = 294/401 (73%), Gaps = 9/401 (2%)
Query: 102 TGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSA 161
TGPRGLHHLVYE++DN++DEA AGY +++EV L AD SV+V D+GRGIP + T KS
Sbjct: 1 TGPRGLHHLVYEVVDNSIDEALAGYCTHVEVDLNADGSVTVTDDGRGIPTGIVAKTGKSG 60
Query: 162 LETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG 221
LETVLTVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD + Q+Y RG
Sbjct: 61 LETVLTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVEVTVWRDKKVHTQRYERG 118
Query: 222 KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIA 281
PVT L ++ R GT + F PD Q+FTT +FD T+A R+RELA+LN + I
Sbjct: 119 IPVTEL---IVKPYKDHRTGTSVSFLPDSQIFTTGTEFDFTTLASRLRELAYLNAGVKIT 175
Query: 282 L---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQ 337
R + ++ + Y GG+ EY+ ++N DK+PLH+ V+ + + + + +++ALQ
Sbjct: 176 FTDHRLQLLKSDQPKVETYEHKGGIREYITYINADKQPLHEEVIYVQGERNNVQVEVALQ 235
Query: 338 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 397
WC+DAY+D +LG+AN+IRT+DGGTH+EG+KA LTRTLN++ +K +KD + +LSGEHVR
Sbjct: 236 WCTDAYTDNILGFANNIRTVDGGTHLEGLKAVLTRTLNAIARKRNKLKDSEPNLSGEHVR 295
Query: 398 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 457
EGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE HP V D+IL K++
Sbjct: 296 EGLTGVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGETLTEYLEFHPSVADAILDKAI 355
Query: 458 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEE 498
A KAA AA+ AR+LVR+KSVL SS LPGKLADCSS P E
Sbjct: 356 QAFKAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPRE 396
>gi|343520664|ref|ZP_08757633.1| DNA gyrase, B subunit [Parvimonas sp. oral taxon 393 str. F0440]
gi|343397622|gb|EGV10156.1| DNA gyrase, B subunit [Parvimonas sp. oral taxon 393 str. F0440]
Length = 638
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/466 (48%), Positives = 316/466 (67%), Gaps = 16/466 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ YG++ I+VL GLE VR RP MYIGSTG +GLHHLVYE++DN++DEA AG I V +
Sbjct: 7 RNYGAKDIKVLTGLEPVRLRPGMYIGSTGVKGLHHLVYEVVDNSIDEALAGVCDTITVTI 66
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DNSV V DNG GIP+++HP T KS LETVLT+LHAGGKF +++ Y VSGGLHGVG+S
Sbjct: 67 FDDNSVRVEDNGSGIPVEVHPQTGKSTLETVLTILHAGGKF--NNNAYQVSGGLHGVGVS 124
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALSE L V RDG Y Q++SRG + L V + GT I F PD ++F
Sbjct: 125 VVNALSEWLIANVKRDGKLYEQQFSRGNATSKLEV----VGTSKETGTIITFKPDSEIFD 180
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTD 313
T I F+ + R RE+AFLN + I E D Y E F + GG++ +V+++N +
Sbjct: 181 TTI-FEKEILRNRFREMAFLNKGVKIVFTDERED-----YTETFHYEGGIKSFVEYMNRN 234
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K LH +V+ F+ +++++Q+ +D YS+ +L +AN+I T +GG+H+ G K +LTR
Sbjct: 235 KNNLHNEVIYFQGQRGDSQVEISMQY-TDGYSENVLTFANNIHTPEGGSHLVGFKTALTR 293
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
TLN G+K +KDK+ +L G+ REGLT I+S+++PNP+FEGQTK +LGN E R +V+
Sbjct: 294 TLNDYGRKYNLIKDKEANLQGDDTREGLTGIVSIKLPNPQFEGQTKAKLGNSESRGIVET 353
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ + L +LE +P V ++ K+ S+ +A AA++ARDL R+KS+L +++LPGKL+DC
Sbjct: 354 FLYDNLMTFLEENPKVGKIVIEKAQSSARAREAARKARDLTRKKSILDNTTLPGKLSDCQ 413
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
+ +EI++VEGDSAGGSAKQGRD +FQ ++ PL+ I A
Sbjct: 414 ESDISVNEIYLVEGDSAGGSAKQGRDSKFQAVL-PLKGKIMNVEKA 458
>gi|260910948|ref|ZP_05917589.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella sp. oral
taxon 472 str. F0295]
gi|260634939|gb|EEX52988.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella sp. oral
taxon 472 str. F0295]
Length = 657
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/464 (49%), Positives = 305/464 (65%), Gaps = 15/464 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y + IQVLEGLEAVRKRPAMYIG +GLHHLV E +DN++DEA AGY S+IEV +
Sbjct: 10 NYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLVNETVDNSIDEAMAGYCSSIEVTIN 69
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V D+GRGIP+D H +KSALE V+TVLHAGGKF S Y VSGGLHGVG+S
Sbjct: 70 EDNSITVQDDGRGIPVDEHEKLHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSC 127
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS + V+RDG Y Q+Y GKP+ + V D++GTR +FWPD +FTT
Sbjct: 128 VNALSTRMLSQVFRDGKIYQQEYETGKPLYPVKV----VGETDKRGTRQQFWPDPNIFTT 183
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDK 314
+ + + IA R+RELA+LN + I L D E F A GL+E+V++++ +
Sbjct: 184 TV-YRWDIIASRMRELAYLNAGVKITLTDLRPDENGKTRTETFHAKDGLKEFVRYVDRHR 242
Query: 315 KPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
L DV+ + + I I++A+ + +D YS+ + Y N+I TI+GGTH+ G + +LTRT
Sbjct: 243 SHLFDDVIYLKTEKQNIPIEVAVMYNTD-YSENIHSYVNNINTIEGGTHLTGFRMALTRT 301
Query: 374 LNSLGKK----SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKV 429
L + SK ++ I ++GE REGLT +IS++V P+FEGQTKT+LGN EV
Sbjct: 302 LKTYADNDPVISKQIEKSKIEIAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGA 361
Query: 430 VDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLA 489
V Q+V E L YLE HP I K + A A +AA++AR+ V++K+ + LPGKLA
Sbjct: 362 VQQAVGEALGYYLEEHPKEAKLICDKVILAATARIAARKARESVQRKNPMSGGGLPGKLA 421
Query: 490 DCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
DCS+ P+ SEIF+VEGDSAGGSAKQGRDR Q I+ PL+ I
Sbjct: 422 DCSNKDPKTSEIFLVEGDSAGGSAKQGRDRYTQAIL-PLKGKIL 464
>gi|49484917|ref|YP_042138.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MSSA476]
gi|386829730|ref|YP_006236384.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus HO 5096
0412]
gi|49243360|emb|CAG41777.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MSSA476]
gi|385195122|emb|CCG14722.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus HO 5096
0412]
Length = 643
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 243/466 (52%), Positives = 320/466 (68%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 10 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 69
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 70 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 127
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V R+ YHQ Y +G P L V + D+ GT IRF D ++F
Sbjct: 128 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIF 183
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +++ T+ RIRELAFLN + I LR E D E + + Y + GG++ YV+ LN +
Sbjct: 184 TETTVYNYETLQQRIRELAFLNKGIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNEN 242
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 243 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 301
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G SK +K++ LSGE REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 302 VLNSYGLSSKIMKEEKDRLSGEDTREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 361
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P V +++ K + A +A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 362 LFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAREVTRRKSALDVASLPGKLADCS 421
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S +PEE EIF+VEGDSAGGS K GRD R Q I+ PL+ I A
Sbjct: 422 SKSPEECEIFLVEGDSAGGSTKSGRDSRTQAIL-PLRGKILNVEKA 466
>gi|302388606|ref|YP_003824427.1| DNA gyrase subunit B [Thermosediminibacter oceani DSM 16646]
gi|302199234|gb|ADL06804.1| DNA gyrase subunit B [Thermosediminibacter oceani DSM 16646]
Length = 637
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/466 (49%), Positives = 318/466 (68%), Gaps = 16/466 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y +I+VLEGLE VR RP MYIGST RGLHHLVYE++DN++DEA AG+ NI V +
Sbjct: 6 VYDETKIEVLEGLEHVRLRPGMYIGSTDSRGLHHLVYEVVDNSIDEALAGFCKNILVTIN 65
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
D S++V D+GRGIP+ +HP K ALE LT+LHAGGKFG + GY VSGGLHGVG+SV
Sbjct: 66 KDGSITVDDDGRGIPVKIHPKVGKPALEVALTMLHAGGKFG--TGGYKVSGGLHGVGVSV 123
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS+ LEV V RDG +Y Q+Y RGKPVT V + GT+I F PD Q+F
Sbjct: 124 VNALSKWLEVEVKRDGFKYFQRYERGKPVT----EVKKIGEASDTGTKITFMPDDQIFED 179
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
F+++ +A R+RE AFLN L I ++ D + + + GG+ +V++LN +K
Sbjct: 180 T-SFNYDILAQRLREQAFLNRGLKIEIK----DLRTGKEQVFHYEGGIVSFVKYLNRNKD 234
Query: 316 PLH-DVVGFR--KDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
LH D + R +++ALQ+ +D+Y++ +L +AN+I T +GGTH+ G K++LTR
Sbjct: 235 VLHEDPIYMRAASQEGEWEVEVALQY-NDSYAENVLSFANNINTQEGGTHLVGFKSALTR 293
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
++N +K +K++D +LSG+ VREGLT +ISV++ NP+FEGQTKT+LGN E+R +V+
Sbjct: 294 SINDYARKMNLLKEQDPNLSGDDVREGLTAVISVKLVNPQFEGQTKTKLGNSEMRGIVES 353
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
V + + +LE +P V I+ K++SA +A AA++AR+LVR+K+ L +SLPGKLADC
Sbjct: 354 VVGDAMNRFLEENPSVARVIVEKAISAARAREAARKARELVRRKNALDRTSLPGKLADCR 413
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P E+++VEGDSAGGSAKQGRD RFQ I+ PL+ I A
Sbjct: 414 EKDPRLCELYLVEGDSAGGSAKQGRDPRFQAIL-PLRGKILNVEKA 458
>gi|319939445|ref|ZP_08013805.1| DNA gyrase subunit B [Streptococcus anginosus 1_2_62CV]
gi|418963940|ref|ZP_13515771.1| DNA gyrase, B subunit [Streptococcus anginosus subsp. whileyi CCUG
39159]
gi|421490001|ref|ZP_15937376.1| DNA gyrase, B subunit [Streptococcus anginosus SK1138]
gi|319811431|gb|EFW07726.1| DNA gyrase subunit B [Streptococcus anginosus 1_2_62CV]
gi|383342468|gb|EID20685.1| DNA gyrase, B subunit [Streptococcus anginosus subsp. whileyi CCUG
39159]
gi|400374014|gb|EJP26938.1| DNA gyrase, B subunit [Streptococcus anginosus SK1138]
Length = 648
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/466 (48%), Positives = 320/466 (68%), Gaps = 11/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA AG+A++I+V
Sbjct: 10 AQDYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALAGFATHIQVF 69
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++V D+GRGIP+D+ T + A+ETV T+LHAGGKFGG S LHGVG
Sbjct: 70 IEKDNSITVVDDGRGIPVDIQEKTGRPAVETVFTILHAGGKFGGGGYKVSGG--LHGVGS 127
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS L+V V+++G + Q+Y RG V L + DR GT + F PD ++F
Sbjct: 128 SVVNALSTQLDVRVYKNGQIHFQEYRRGHVVADLEI----IGETDRTGTTVHFTPDPEIF 183
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T ++FD + R++ELAFLN L I++ + E Q +Y + GG+ YVQ++N +
Sbjct: 184 TETVEFDFEKLNKRVQELAFLNRGLRISITDKREGLE--QTKDYHYEGGIASYVQYINEN 241
Query: 314 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K + + + ++D IT+++A+Q+ + Y +T++ +AN+I T +GGTH +G + +LTR
Sbjct: 242 KDVIFENPIYTDGEMDDITVEVAMQYTT-GYHETVMSFANNIHTHEGGTHEQGFRTALTR 300
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N KK+K +K+ + +L+GE VREGLT +ISV+ PNP+FEGQTKT+LGN EV K+ ++
Sbjct: 301 VINDYAKKNKLLKENEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVVKITNR 360
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E +++L +P V I+ K + A KA +AAKRAR++ R+KS L S+LPGKLADCS
Sbjct: 361 LFSEAFSDFLLENPAVAKKIVEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLADCS 420
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P E+E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 421 SNDPHETELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 465
>gi|21281734|ref|NP_644820.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MW2]
gi|87161454|ref|YP_492727.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88193828|ref|YP_498613.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|151220216|ref|YP_001331039.1| DNA gyrase B subunit [Staphylococcus aureus subsp. aureus str.
Newman]
gi|161508271|ref|YP_001573930.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus USA300_TCH1516]
gi|253733834|ref|ZP_04867999.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus TCH130]
gi|258451362|ref|ZP_05699393.1| DNA gyrase, B subunit [Staphylococcus aureus A5948]
gi|262049437|ref|ZP_06022309.1| DNA gyrase subunit B [Staphylococcus aureus D30]
gi|262051893|ref|ZP_06024108.1| DNA gyrase subunit B [Staphylococcus aureus 930918-3]
gi|282902636|ref|ZP_06310529.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus C160]
gi|282918073|ref|ZP_06325823.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus D139]
gi|282920724|ref|ZP_06328443.1| DNA gyrase, B subunit [Staphylococcus aureus A9765]
gi|282921295|ref|ZP_06329013.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus C427]
gi|283767795|ref|ZP_06340710.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus H19]
gi|297209447|ref|ZP_06925845.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus ATCC 51811]
gi|300911471|ref|ZP_07128920.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus TCH70]
gi|379013370|ref|YP_005289606.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VC40]
gi|379019818|ref|YP_005296480.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus M013]
gi|384546274|ref|YP_005735527.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ED133]
gi|387779222|ref|YP_005754020.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus LGA251]
gi|415687298|ref|ZP_11451225.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus CGS01]
gi|416845644|ref|ZP_11906099.1| DNA gyrase subunit B [Staphylococcus aureus O46]
gi|417648054|ref|ZP_12297884.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21189]
gi|417799292|ref|ZP_12446436.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21310]
gi|417897325|ref|ZP_12541262.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21235]
gi|417899938|ref|ZP_12543838.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21259]
gi|417905250|ref|ZP_12549062.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21269]
gi|418286939|ref|ZP_12899575.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21209]
gi|418318231|ref|ZP_12929640.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21232]
gi|418561814|ref|ZP_13126292.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21262]
gi|418569364|ref|ZP_13133697.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21283]
gi|418577923|ref|ZP_13142021.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1114]
gi|418596805|ref|ZP_13160353.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21342]
gi|418641274|ref|ZP_13203487.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-24]
gi|418648772|ref|ZP_13210809.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-88]
gi|418650154|ref|ZP_13212176.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-91]
gi|418657144|ref|ZP_13218921.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-105]
gi|418658950|ref|ZP_13220646.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-111]
gi|418902289|ref|ZP_13456333.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1770]
gi|418910550|ref|ZP_13464538.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG547]
gi|418927294|ref|ZP_13481184.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1612]
gi|418933015|ref|ZP_13486841.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIGC128]
gi|418949662|ref|ZP_13501899.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-160]
gi|418986990|ref|ZP_13534666.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1835]
gi|419773340|ref|ZP_14299349.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CO-23]
gi|422742288|ref|ZP_16796295.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus MRSA177]
gi|422745337|ref|ZP_16799280.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus MRSA131]
gi|440708266|ref|ZP_20888936.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21282]
gi|440736072|ref|ZP_20915673.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus DSM 20231]
gi|448740839|ref|ZP_21722813.1| DNA gyrase subunit B [Staphylococcus aureus KT/314250]
gi|448744200|ref|ZP_21726100.1| DNA gyrase subunit B [Staphylococcus aureus KT/Y21]
gi|59797750|sp|Q6GD85.3|GYRB_STAAS RecName: Full=DNA gyrase subunit B
gi|59799585|sp|P0A0K7.2|GYRB_STAAW RecName: Full=DNA gyrase subunit B
gi|59799586|sp|P0A0K8.2|GYRB_STAAU RecName: Full=DNA gyrase subunit B
gi|93204588|sp|Q2FKQ1.3|GYRB_STAA3 RecName: Full=DNA gyrase subunit B
gi|296395|emb|CAA50570.1| DNA gyrase [Staphylococcus aureus]
gi|540541|dbj|BAA01369.1| DNA gyrase B [Staphylococcus aureus]
gi|21203169|dbj|BAB93870.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MW2]
gi|87127428|gb|ABD21942.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87201386|gb|ABD29196.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|150373016|dbj|BAF66276.1| DNA gyrase B subunit [Staphylococcus aureus subsp. aureus str.
Newman]
gi|160367080|gb|ABX28051.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus USA300_TCH1516]
gi|253728137|gb|EES96866.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus TCH130]
gi|257860892|gb|EEV83709.1| DNA gyrase, B subunit [Staphylococcus aureus A5948]
gi|259160220|gb|EEW45249.1| DNA gyrase subunit B [Staphylococcus aureus 930918-3]
gi|259162434|gb|EEW47004.1| DNA gyrase subunit B [Staphylococcus aureus D30]
gi|282315710|gb|EFB46094.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus C427]
gi|282318358|gb|EFB48718.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus D139]
gi|282594132|gb|EFB99120.1| DNA gyrase, B subunit [Staphylococcus aureus A9765]
gi|282597095|gb|EFC02054.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus C160]
gi|283461674|gb|EFC08758.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus H19]
gi|296885908|gb|EFH24843.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus ATCC 51811]
gi|298693327|gb|ADI96549.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus ED133]
gi|300887650|gb|EFK82846.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus TCH70]
gi|315197923|gb|EFU28256.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus CGS01]
gi|320141422|gb|EFW33265.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus MRSA131]
gi|320144405|gb|EFW36170.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus MRSA177]
gi|323443267|gb|EGB00884.1| DNA gyrase subunit B [Staphylococcus aureus O46]
gi|329731718|gb|EGG68078.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21189]
gi|334274194|gb|EGL92521.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21310]
gi|341839825|gb|EGS81379.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21235]
gi|341844001|gb|EGS85221.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21259]
gi|341844115|gb|EGS85334.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21269]
gi|344176324|emb|CCC86774.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus LGA251]
gi|359829127|gb|AEV77105.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus M013]
gi|365165103|gb|EHM56932.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21209]
gi|365243554|gb|EHM84228.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21232]
gi|371975308|gb|EHO92603.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21262]
gi|371985759|gb|EHP02813.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21283]
gi|374362067|gb|AEZ36172.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VC40]
gi|374396606|gb|EHQ67837.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21342]
gi|375019434|gb|EHS12988.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-24]
gi|375025187|gb|EHS18594.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-88]
gi|375028623|gb|EHS21966.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-91]
gi|375031320|gb|EHS24602.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-105]
gi|375036979|gb|EHS30035.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-111]
gi|375378271|gb|EHS81677.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-160]
gi|377699805|gb|EHT24151.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1114]
gi|377721002|gb|EHT45147.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1835]
gi|377728364|gb|EHT52466.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG547]
gi|377741004|gb|EHT65000.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1612]
gi|377745642|gb|EHT69618.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1770]
gi|377773189|gb|EHT96935.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIGC128]
gi|383972913|gb|EID88936.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CO-23]
gi|436429839|gb|ELP27203.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus DSM 20231]
gi|436505158|gb|ELP41103.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21282]
gi|445548370|gb|ELY16622.1| DNA gyrase subunit B [Staphylococcus aureus KT/314250]
gi|445562477|gb|ELY18648.1| DNA gyrase subunit B [Staphylococcus aureus KT/Y21]
Length = 644
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 243/466 (52%), Positives = 320/466 (68%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V R+ YHQ Y +G P L V + D+ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +++ T+ RIRELAFLN + I LR E D E + + Y + GG++ YV+ LN +
Sbjct: 185 TETTVYNYETLQQRIRELAFLNKGIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNEN 243
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 302
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G SK +K++ LSGE REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 303 VLNSYGLSSKIMKEEKDRLSGEDTREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 362
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P V +++ K + A +A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAREVTRRKSALDVASLPGKLADCS 422
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S +PEE EIF+VEGDSAGGS K GRD R Q I+ PL+ I A
Sbjct: 423 SKSPEECEIFLVEGDSAGGSTKSGRDSRTQAIL-PLRGKILNVEKA 467
>gi|15922995|ref|NP_370529.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus Mu50]
gi|15925710|ref|NP_373243.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus N315]
gi|156978336|ref|YP_001440595.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus Mu3]
gi|253316843|ref|ZP_04840056.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|253730404|ref|ZP_04864569.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|254663939|ref|ZP_05143411.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257793543|ref|ZP_05642522.1| DNA gyrase, B subunit [Staphylococcus aureus A9781]
gi|258411151|ref|ZP_05681430.1| DNA gyrase subunit B [Staphylococcus aureus A9763]
gi|258420945|ref|ZP_05683879.1| DNA gyrase, B subunit [Staphylococcus aureus A9719]
gi|258438584|ref|ZP_05689807.1| hypothetical protein SAKG_01059 [Staphylococcus aureus A9299]
gi|258443960|ref|ZP_05692298.1| hypothetical protein SAJG_01378 [Staphylococcus aureus A8115]
gi|258446224|ref|ZP_05694384.1| DNA gyrase, B subunit [Staphylococcus aureus A6300]
gi|258449117|ref|ZP_05697223.1| DNA gyrase, B subunit [Staphylococcus aureus A6224]
gi|258454405|ref|ZP_05702373.1| DNA gyrase, B subunit [Staphylococcus aureus A5937]
gi|269201695|ref|YP_003280964.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus ED98]
gi|282894284|ref|ZP_06302514.1| DNA gyrase, B subunit [Staphylococcus aureus A8117]
gi|282927755|ref|ZP_06335369.1| DNA gyrase, B subunit [Staphylococcus aureus A10102]
gi|295406869|ref|ZP_06816673.1| hypothetical protein SMAG_02042 [Staphylococcus aureus A8819]
gi|296275682|ref|ZP_06858189.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MR1]
gi|297245904|ref|ZP_06929766.1| hypothetical protein SLAG_01998 [Staphylococcus aureus A8796]
gi|384863401|ref|YP_005748760.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|385780303|ref|YP_005756474.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus 11819-97]
gi|387149193|ref|YP_005740757.1| DNA gyrase subunit B [Staphylococcus aureus 04-02981]
gi|415693122|ref|ZP_11454976.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus CGS03]
gi|417652015|ref|ZP_12301771.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21172]
gi|417654048|ref|ZP_12303776.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21193]
gi|417796905|ref|ZP_12444107.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21305]
gi|417801536|ref|ZP_12448624.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21318]
gi|417893975|ref|ZP_12537998.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21201]
gi|417900702|ref|ZP_12544581.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21266]
gi|418314813|ref|ZP_12926279.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21340]
gi|418322452|ref|ZP_12933785.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus VCU006]
gi|418425904|ref|ZP_12998981.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS1]
gi|418428781|ref|ZP_13001761.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS2]
gi|418431669|ref|ZP_13004559.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS3a]
gi|418435581|ref|ZP_13007421.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS4]
gi|418438336|ref|ZP_13010107.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS5]
gi|418441285|ref|ZP_13012958.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS6]
gi|418441566|ref|ZP_13013193.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS7]
gi|418447232|ref|ZP_13018689.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS8]
gi|418450330|ref|ZP_13021698.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS9]
gi|418453178|ref|ZP_13024493.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS10]
gi|418456115|ref|ZP_13027361.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS11a]
gi|418458991|ref|ZP_13030176.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS11b]
gi|418567448|ref|ZP_13131812.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21272]
gi|418573938|ref|ZP_13138118.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21333]
gi|418598564|ref|ZP_13162073.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21343]
gi|418640046|ref|ZP_13202282.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-3]
gi|418644043|ref|ZP_13206195.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-55]
gi|418653186|ref|ZP_13215131.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-99]
gi|418661955|ref|ZP_13223515.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-122]
gi|418874096|ref|ZP_13428368.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIGC93]
gi|418879712|ref|ZP_13433935.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1213]
gi|418882673|ref|ZP_13436877.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1769]
gi|418885320|ref|ZP_13439476.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1150]
gi|418893491|ref|ZP_13447596.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1057]
gi|418913293|ref|ZP_13467267.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|418918779|ref|ZP_13472728.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIGC348]
gi|418930156|ref|ZP_13484008.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1750]
gi|418989922|ref|ZP_13537586.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1096]
gi|419783663|ref|ZP_14309446.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-M]
gi|421148834|ref|ZP_15608493.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|424769522|ref|ZP_18196748.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CM05]
gi|443636287|ref|ZP_21120402.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21236]
gi|443638069|ref|ZP_21122126.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21196]
gi|54037243|sp|P66937.2|GYRB_STAAN RecName: Full=DNA gyrase subunit B
gi|54041556|sp|P66936.2|GYRB_STAAM RecName: Full=DNA gyrase subunit B
gi|13699922|dbj|BAB41221.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus N315]
gi|14245772|dbj|BAB56167.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus Mu50]
gi|156720471|dbj|BAF76888.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus Mu3]
gi|253725884|gb|EES94613.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|257787515|gb|EEV25855.1| DNA gyrase, B subunit [Staphylococcus aureus A9781]
gi|257840036|gb|EEV64501.1| DNA gyrase subunit B [Staphylococcus aureus A9763]
gi|257843135|gb|EEV67550.1| DNA gyrase, B subunit [Staphylococcus aureus A9719]
gi|257848143|gb|EEV72135.1| hypothetical protein SAKG_01059 [Staphylococcus aureus A9299]
gi|257850844|gb|EEV74788.1| hypothetical protein SAJG_01378 [Staphylococcus aureus A8115]
gi|257855050|gb|EEV77993.1| DNA gyrase, B subunit [Staphylococcus aureus A6300]
gi|257857550|gb|EEV80445.1| DNA gyrase, B subunit [Staphylococcus aureus A6224]
gi|257863499|gb|EEV86259.1| DNA gyrase, B subunit [Staphylococcus aureus A5937]
gi|262073985|gb|ACY09958.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus ED98]
gi|282590515|gb|EFB95593.1| DNA gyrase, B subunit [Staphylococcus aureus A10102]
gi|282763329|gb|EFC03459.1| DNA gyrase, B subunit [Staphylococcus aureus A8117]
gi|285815732|gb|ADC36219.1| DNA gyrase subunit B [Staphylococcus aureus 04-02981]
gi|294968334|gb|EFG44359.1| hypothetical protein SMAG_02042 [Staphylococcus aureus A8819]
gi|297177269|gb|EFH36522.1| hypothetical protein SLAG_01998 [Staphylococcus aureus A8796]
gi|312828568|emb|CBX33410.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315129548|gb|EFT85540.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus CGS03]
gi|329725845|gb|EGG62324.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21172]
gi|329732607|gb|EGG68957.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21193]
gi|334267943|gb|EGL86394.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21305]
gi|334276580|gb|EGL94834.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21318]
gi|341847016|gb|EGS88202.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21266]
gi|341853482|gb|EGS94363.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21201]
gi|364521292|gb|AEW64042.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
11819-97]
gi|365223481|gb|EHM64770.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus VCU006]
gi|365244416|gb|EHM85075.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21340]
gi|371980639|gb|EHO97841.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21333]
gi|371982093|gb|EHO99253.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21272]
gi|374399341|gb|EHQ70482.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21343]
gi|375015446|gb|EHS09101.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-3]
gi|375019491|gb|EHS13044.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-99]
gi|375027023|gb|EHS20400.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-55]
gi|375037444|gb|EHS30478.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-122]
gi|377701338|gb|EHT25671.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1057]
gi|377718582|gb|EHT42754.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1769]
gi|377719156|gb|EHT43327.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1750]
gi|377726373|gb|EHT50485.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1096]
gi|377729262|gb|EHT53358.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1150]
gi|377734873|gb|EHT58910.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1213]
gi|377759336|gb|EHT83217.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|377769065|gb|EHT92843.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIGC348]
gi|377773604|gb|EHT97349.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIGC93]
gi|383364751|gb|EID42057.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-M]
gi|387714926|gb|EIK03037.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS1]
gi|387715095|gb|EIK03201.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS3a]
gi|387715280|gb|EIK03383.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS2]
gi|387722714|gb|EIK10500.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS4]
gi|387724428|gb|EIK12085.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS5]
gi|387726669|gb|EIK14217.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS6]
gi|387732608|gb|EIK19823.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS8]
gi|387733965|gb|EIK21123.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS9]
gi|387740837|gb|EIK27760.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS7]
gi|387741252|gb|EIK28109.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS10]
gi|387741729|gb|EIK28562.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS11a]
gi|387742964|gb|EIK29766.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS11b]
gi|394330936|gb|EJE57024.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|402348167|gb|EJU83162.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CM05]
gi|408422576|emb|CCJ09987.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ST228]
gi|408424564|emb|CCJ11951.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ST228]
gi|408426553|emb|CCJ13916.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ST228]
gi|408428541|emb|CCJ25706.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ST228]
gi|408430530|emb|CCJ17845.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ST228]
gi|408432523|emb|CCJ19808.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ST228]
gi|408434512|emb|CCJ21772.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ST228]
gi|408436497|emb|CCJ23740.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ST228]
gi|443408203|gb|ELS66731.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21236]
gi|443410042|gb|ELS68521.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21196]
Length = 644
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 243/466 (52%), Positives = 320/466 (68%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANKIEVV 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V R+ YHQ Y +G P L V + D+ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +++ T+ RIRELAFLN + I LR E D E + + Y + GG++ YV+ LN +
Sbjct: 185 TETTVYNYETLQQRIRELAFLNKGIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNEN 243
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 302
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G SK +K++ LSGE REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 303 VLNSYGLSSKIMKEEKDRLSGEDTREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 362
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P V +++ K + A +A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAREVTRRKSALDVASLPGKLADCS 422
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S +PEE EIF+VEGDSAGGS K GRD R Q I+ PL+ I A
Sbjct: 423 SKSPEECEIFLVEGDSAGGSTKSGRDSRTQAIL-PLRGKILNVEKA 467
>gi|222150258|ref|YP_002559411.1| DNA gyrase subunit B [Macrococcus caseolyticus JCSC5402]
gi|222119380|dbj|BAH16715.1| DNA gyrase subunit B [Macrococcus caseolyticus JCSC5402]
Length = 642
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/463 (49%), Positives = 315/463 (68%), Gaps = 10/463 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG++QIQVLEGLEAVRKRP MYIGST +GLHHLV+EI+DN++DEA AGYA ++EV +
Sbjct: 12 YGADQIQVLEGLEAVRKRPGMYIGSTASKGLHHLVWEIVDNSIDEALAGYADHVEVTIEE 71
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG S LHGVG SVV
Sbjct: 72 DNWIKVTDNGRGIPVDIQKKMGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVV 129
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS +LEV V +DG YHQ Y RG P L + D+ GT IRF D ++FT
Sbjct: 130 NALSSTLEVYVHKDGKIYHQAYHRGVPAFDLKV----IGETDKTGTVIRFKADSEIFTET 185
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
++++ + RIRELAFLN + + + K++ + ++ +++ Y + GG++ YV+ LN K+
Sbjct: 186 TEYEYEILQKRIRELAFLNKGIKLEI-KDEREQDEIRHDVYHYEGGIKSYVELLNKSKET 244
Query: 317 LH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
L + + + D I +++++Q+ ++ YS +L YAN+I T +GGTH +G K +LTR +N
Sbjct: 245 LFPEPIYIHDNRDEIEVEISIQY-NNGYSTNLLSYANNIHTYEGGTHEDGFKRALTRVIN 303
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
S G K+K +K+ D LSGE VREG+T I+S++ NP+FEGQTKT+LGN EVR++ D
Sbjct: 304 SYGVKNKLIKEADEKLSGEDVREGITAIVSIKHGNPQFEGQTKTKLGNTEVRQITDNLFA 363
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E +L +P + I+ K + A +A LAAK+AR++ R+KS L SSLPGKLADCSS
Sbjct: 364 ENFERFLLENPPIARIIVEKGIMASRARLAAKKAREVTRRKSGLEISSLPGKLADCSSKD 423
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE++IVEGDSAGGSAK GRD + Q I+ PL+ I A
Sbjct: 424 PSISELYIVEGDSAGGSAKSGRDSKTQAIL-PLRGKILNVEKA 465
>gi|416840825|ref|ZP_11903999.1| DNA gyrase subunit B [Staphylococcus aureus O11]
gi|323439694|gb|EGA97412.1| DNA gyrase subunit B [Staphylococcus aureus O11]
Length = 644
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 243/466 (52%), Positives = 320/466 (68%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V R+ YHQ Y +G P L V + D+ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +++ T+ RIRELAFLN + I LR E D E + + Y + GG++ YV+ LN +
Sbjct: 185 TETTVYNYETLQQRIRELAFLNKGIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNEN 243
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 302
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G SK +K++ LSGE REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 303 VLNSYGLSSKIMKEEKDRLSGEDTREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 362
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P V +++ K + A +A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAREVTRRKSALDVASLPGKLADCS 422
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S +PEE EIF+VEGDSAGGS K GRD R Q I+ PL+ I A
Sbjct: 423 SKSPEECEIFLVEGDSAGGSTKSGRDSRTQAIL-PLRGKILNVEKA 467
>gi|148266452|ref|YP_001245395.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus JH9]
gi|150392485|ref|YP_001315160.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus JH1]
gi|418876920|ref|ZP_13431162.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1165]
gi|147739521|gb|ABQ47819.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus JH9]
gi|149944937|gb|ABR50873.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus JH1]
gi|377699237|gb|EHT23584.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1165]
Length = 640
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 243/466 (52%), Positives = 320/466 (68%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 7 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANKIEVV 66
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 67 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 124
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V R+ YHQ Y +G P L V + D+ GT IRF D ++F
Sbjct: 125 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIF 180
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +++ T+ RIRELAFLN + I LR E D E + + Y + GG++ YV+ LN +
Sbjct: 181 TETTVYNYETLQQRIRELAFLNKGIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNEN 239
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 240 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 298
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G SK +K++ LSGE REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 299 VLNSYGLSSKIMKEEKDRLSGEDTREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 358
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P V +++ K + A +A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 359 LFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAREVTRRKSALDVASLPGKLADCS 418
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S +PEE EIF+VEGDSAGGS K GRD R Q I+ PL+ I A
Sbjct: 419 SKSPEECEIFLVEGDSAGGSTKSGRDSRTQAIL-PLRGKILNVEKA 463
>gi|24212705|ref|NP_710186.1| DNA gyrase subunit B [Leptospira interrogans serovar Lai str.
56601]
gi|45655919|ref|YP_000005.1| DNA gyrase subunit B [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|386072493|ref|YP_005986810.1| DNA gyrase subunit B [Leptospira interrogans serovar Lai str. IPAV]
gi|417761365|ref|ZP_12409377.1| DNA gyrase, B subunit [Leptospira interrogans str. 2002000624]
gi|417776551|ref|ZP_12424387.1| DNA gyrase, B subunit [Leptospira interrogans str. 2002000621]
gi|417784799|ref|ZP_12432504.1| DNA gyrase, B subunit [Leptospira interrogans str. C10069]
gi|418670039|ref|ZP_13231413.1| DNA gyrase, B subunit [Leptospira interrogans serovar Pyrogenes
str. 2006006960]
gi|418672460|ref|ZP_13233799.1| DNA gyrase, B subunit [Leptospira interrogans str. 2002000623]
gi|418707603|ref|ZP_13268423.1| DNA gyrase, B subunit [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|418730771|ref|ZP_13289247.1| DNA gyrase, B subunit [Leptospira interrogans str. UI 12758]
gi|421087509|ref|ZP_15548345.1| DNA gyrase, B subunit [Leptospira santarosai str. HAI1594]
gi|421104639|ref|ZP_15565234.1| DNA gyrase, B subunit [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|421123297|ref|ZP_15583579.1| DNA gyrase, B subunit [Leptospira interrogans str. Brem 329]
gi|24193336|gb|AAN47204.1|AE011192_5 DNA gyrase subunit B [Leptospira interrogans serovar Lai str.
56601]
gi|45599152|gb|AAS68642.1| DNA gyrase subunit B [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|321401260|gb|ADW83041.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401264|gb|ADW83043.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401268|gb|ADW83045.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401272|gb|ADW83047.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401278|gb|ADW83050.1| DNA gyrase subunit B [Leptospira interrogans]
gi|353456282|gb|AER00827.1| DNA gyrase subunit B [Leptospira interrogans serovar Lai str. IPAV]
gi|409942779|gb|EKN88384.1| DNA gyrase, B subunit [Leptospira interrogans str. 2002000624]
gi|409951588|gb|EKO06102.1| DNA gyrase, B subunit [Leptospira interrogans str. C10069]
gi|410344041|gb|EKO95236.1| DNA gyrase, B subunit [Leptospira interrogans str. Brem 329]
gi|410366091|gb|EKP21484.1| DNA gyrase, B subunit [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410429758|gb|EKP74133.1| DNA gyrase, B subunit [Leptospira santarosai str. HAI1594]
gi|410573693|gb|EKQ36739.1| DNA gyrase, B subunit [Leptospira interrogans str. 2002000621]
gi|410580588|gb|EKQ48410.1| DNA gyrase, B subunit [Leptospira interrogans str. 2002000623]
gi|410754329|gb|EKR15984.1| DNA gyrase, B subunit [Leptospira interrogans serovar Pyrogenes
str. 2006006960]
gi|410772024|gb|EKR47218.1| DNA gyrase, B subunit [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|410774333|gb|EKR54341.1| DNA gyrase, B subunit [Leptospira interrogans str. UI 12758]
gi|455790085|gb|EMF41975.1| DNA gyrase, B subunit [Leptospira interrogans serovar Lora str. TE
1992]
gi|456824447|gb|EMF72884.1| DNA gyrase, B subunit [Leptospira interrogans serovar Canicola str.
LT1962]
gi|456971873|gb|EMG12397.1| DNA gyrase, B subunit [Leptospira interrogans serovar Grippotyphosa
str. LT2186]
gi|456985971|gb|EMG21650.1| DNA gyrase, B subunit [Leptospira interrogans serovar Copenhageni
str. LT2050]
Length = 639
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/464 (47%), Positives = 311/464 (67%), Gaps = 10/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y + QI++LEGLEAVRKRP MYIG+ GLH +VYE++DN+VDEA AG+ + I++++L
Sbjct: 7 SYSAGQIKILEGLEAVRKRPGMYIGTQDETGLHKMVYEVVDNSVDEAMAGHCTEIKISIL 66
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DN V V DNGRGIP+D+HP S +E V+T+LHAGGKF + Y VSGGLHGVG+SV
Sbjct: 67 PDNIVEVKDNGRGIPVDIHPDKKISTIEVVMTILHAGGKF--ENDAYKVSGGLHGVGVSV 124
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALSE LEV V + G Y QKY +G PV+++ + DS +R GT +RF PD +FTT
Sbjct: 125 VNALSEYLEVEVHQKGKVYTQKYEKGVPVSSVQ---IQGDSSER-GTIVRFKPDATIFTT 180
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
+ F + ++ R RELAFLN L + + E NE+ F+GG+ +V+ +N +K
Sbjct: 181 -VDFQFDVLSARFRELAFLNKGLVLVVEDHRRGKENILRNEFQFSGGIVSFVEHINENKH 239
Query: 316 PLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
P+H V+ F ++ D + ++++Q+ S+ Y++ + + N+I GGTH+EG +A+LTRTLN
Sbjct: 240 PMHKVIHFERNKDDVLAEISIQY-SETYTENIFCFTNNINNNLGGTHLEGFRAALTRTLN 298
Query: 376 SLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
KK T+ K LSGE V+EGLT +IS+++P P+F QTK +L N E++ ++
Sbjct: 299 DFLKKDSTLSKKHPTGLSGEDVKEGLTAVISIKIPQPQFNSQTKEKLVNAEIKGIMQTLS 358
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E LT + E +P++ IL K + + KA AA++ARDL R+K+VL LPGKLADCS
Sbjct: 359 SEGLTLFFEENPNITKKILEKCILSAKAREAARKARDLTRRKTVLEGGGLPGKLADCSEK 418
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE+++VEGDSAGGSAKQGRDR Q I+ PL+ I A
Sbjct: 419 DPAHSELYLVEGDSAGGSAKQGRDRNTQAIL-PLKGKILNVEKA 461
>gi|315657693|ref|ZP_07910575.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Mobiluncus curtisii
subsp. holmesii ATCC 35242]
gi|315492165|gb|EFU81774.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Mobiluncus curtisii
subsp. holmesii ATCC 35242]
Length = 686
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 233/488 (47%), Positives = 318/488 (65%), Gaps = 34/488 (6%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + I+VLEGLEAVR RP MYIGSTG RGLHHLVYE++DN+VDE+ AGY +IEV L A
Sbjct: 23 YDASDIRVLEGLEAVRVRPGMYIGSTGERGLHHLVYEVVDNSVDESLAGYCDHIEVTLQA 82
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D V VADNGRGIP+ HP+ ++ +E V+T+LHAGGKFGGSS Y+VSGGLHGVG+SVV
Sbjct: 83 DGGVRVADNGRGIPVAEHPSEHRPTVEVVMTILHAGGKFGGSS--YAVSGGLHGVGISVV 140
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS + TV RDG E+H ++ G V P + GT F+PD ++F T
Sbjct: 141 NALSTKILTTVKRDGYEWHIEFGNGGKVIQPLRRGEPTEET---GTVQVFYPDPEIFET- 196
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKE-----------------DSDPEK--NQYNEY 297
++FD+ T+ R +++AFLN L I + E D+D K + Y
Sbjct: 197 VEFDYETLRTRFQQMAFLNKGLRITITDERPNVTAEGDFVTGDQDGDADSPKVGRRSVSY 256
Query: 298 FFAGGLEEYVQWLNTDKKP--LHD-VVGFR---KDVD-GITIDLALQWCSDAYSDTMLGY 350
+ GL +YV ++N KK +H+ ++ F +DV+ + +++ALQW S AYS+++ Y
Sbjct: 257 CYENGLHDYVHFINDTKKSEVVHEEIIDFEASLEDVENAMALEIALQWTS-AYSESIYTY 315
Query: 351 ANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPN 410
AN+I T +GGTH EG +A+LT +N +G++ +KDKD +LSG+ REGLT +ISV++ N
Sbjct: 316 ANTINTTEGGTHEEGFRAALTSLMNKIGREKGFIKDKDENLSGDDCREGLTAVISVKIRN 375
Query: 411 PEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRAR 470
P+FEGQTKT+LGN E R V Q+V L ++ + HP +I++K+ SA +A AA++AR
Sbjct: 376 PQFEGQTKTKLGNTEARTFVQQTVYSQLGDWFDAHPAECKAIIAKAQSAQQARNAARKAR 435
Query: 471 DLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQE 530
D R+K+ L S S+PGKL DCSS + EIF+VEGDSAGGSA GRD Q I+ PL+
Sbjct: 436 DATRRKTALDSFSMPGKLRDCSSRDASDCEIFLVEGDSAGGSAVAGRDPAHQAIL-PLRG 494
Query: 531 SIFAFASA 538
I A
Sbjct: 495 KILNVEKA 502
>gi|366163637|ref|ZP_09463392.1| DNA gyrase subunit B [Acetivibrio cellulolyticus CD2]
Length = 641
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/454 (50%), Positives = 309/454 (68%), Gaps = 12/454 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y IQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AGY + IE+ +
Sbjct: 10 SYNESNIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIMDNSIDEALAGYCTEIEITIN 69
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++ DNGRGIP+ +HP +E V T+LHAGGKFGG GY+VSGGLHGVG SV
Sbjct: 70 PDNSITNIDNGRGIPVGIHPKMGIPTVEVVHTILHAGGKFGGE--GYTVSGGLHGVGASV 127
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALSE LEV V+RDG Y Q+Y RG T L + + ++ GT+ F PD +F
Sbjct: 128 VNALSEYLEVEVYRDGNIYKQRYERGNVATKLEV----IGTTEKTGTKTTFKPDSLIFE- 182
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
++F + + R RELAFLN L I L D PE+ + + GG+ +V+++N +K
Sbjct: 183 EMEFSFDILLNRFRELAFLNKGLMITLI--DKRPEEPIVKKLHYEGGIISFVEYMNRNKG 240
Query: 316 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+ + + DG +++++Q+ +D Y + + +AN+I T +GGTH+ G K ++T+
Sbjct: 241 VIQEHPIYIDCSKDGSNVEISMQY-NDTYVENIFSFANNIATTEGGTHLTGFKTAITKVF 299
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +K +KD D +L+GE +REGLT +ISV++ P+FEGQTKT+LGN E+R +V+ +V
Sbjct: 300 NDYARKYNYLKDNDKNLAGEDIREGLTAVISVKLQEPQFEGQTKTKLGNSEIRSLVEFTV 359
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E L +LE +P V +IL K L+A +A AA++ARDL R+KS L +++LPGKLADCS
Sbjct: 360 GEKLASFLEENPSVTKTILDKCLTAARAREAARKARDLTRRKSALETTTLPGKLADCSEK 419
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPL 528
P EI+IVEGDSAGGSAKQGRDR+FQ I+ PL
Sbjct: 420 DPSLCEIYIVEGDSAGGSAKQGRDRKFQAIL-PL 452
>gi|23978247|dbj|BAC21116.1| DNA gyrase B subunit [Stanieria cyanosphaera str. PCC 7437]
Length = 393
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/398 (56%), Positives = 293/398 (73%), Gaps = 6/398 (1%)
Query: 102 TGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSA 161
TGPRGLHHLVYE++DN++DEA AGY ++IE+ L AD SV V D+GRGIP +HP T KSA
Sbjct: 1 TGPRGLHHLVYEVVDNSIDEALAGYCTHIEIELNADGSVRVTDDGRGIPTGIHPKTGKSA 60
Query: 162 LETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG 221
LETV+TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD + Q+Y RG
Sbjct: 61 LETVMTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEWVEVTVWRDQKIHTQRYERG 118
Query: 222 KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIA 281
P L + R GT + F+PD ++FT I F++N +AGR+RELA+LN + I
Sbjct: 119 IPSGDLVVQA-NIQEPQRTGTAVHFFPDTKIFTETIHFEYNVLAGRLRELAYLNAGVKIT 177
Query: 282 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCS 340
D E+ + YF+ GG++EYV ++ +K+PLH D++ + + +G+ I++ALQWC
Sbjct: 178 FT--DHRIEETRQEIYFYEGGIKEYVTYMTREKEPLHQDIIYVQGEKNGVNIEVALQWCV 235
Query: 341 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 400
DA++D +LG+AN+IRTIDGGTH+EG+K LTRT+N + +K +K+ + +L GE+VREGL
Sbjct: 236 DAFNDNLLGFANNIRTIDGGTHLEGLKTVLTRTINDIARKRNKIKENESNLGGENVREGL 295
Query: 401 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 460
T +ISV+VP+PEFEGQTKT+LGN EVR +VD V E L EYLE +P V DS++ K++ A
Sbjct: 296 TGVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLNEYLEFNPQVADSVIEKAVQAF 355
Query: 461 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEE 498
KAA AA+RAR+LVR+KSVL SS LPGKLADCSS P E
Sbjct: 356 KAAEAARRARELVRRKSVLESSPLPGKLADCSSRDPGE 393
>gi|452959107|gb|EME64448.1| DNA gyrase subunit B [Rhodococcus ruber BKS 20-38]
Length = 677
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 237/502 (47%), Positives = 321/502 (63%), Gaps = 41/502 (8%)
Query: 67 AFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGY 126
A K N + YG+ I VLEGLEAVRKRP MYIGSTG RGLHHL++E++DN+VDEA AG+
Sbjct: 3 AQKSNKSNSDYGASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEAMAGH 62
Query: 127 ASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSG 186
A+ +EV LL D V V D+GRGIP+ +H A+ +E VLT LHAGGKF S Y+VSG
Sbjct: 63 ATKVEVTLLEDGGVQVVDDGRGIPVGMH-ASGVPTVEVVLTQLHAGGKF--DSDAYAVSG 119
Query: 187 GLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRF 246
GLHGVG+SVVNALS L+V + RDG + Q Y KP ++ + GT +RF
Sbjct: 120 GLHGVGISVVNALSTQLQVEIDRDGHHWEQTYQSSKP-----GKLVKGEPTRATGTTVRF 174
Query: 247 WPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPE---------------- 290
W D +F T ++ T+A R++E+AFLN LTI L E PE
Sbjct: 175 WADPDIFETTT-YNFETVARRLQEMAFLNKGLTITLTDERVAPEEVTDEVVSELAEAPKK 233
Query: 291 -------------KNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLAL 336
K + Y + GGLE+YV+ +N K+P+H+ VVGF G +++A+
Sbjct: 234 AEEQEQAEIEQQHKVKVRVYHYPGGLEDYVRHINRTKQPIHNSVVGFTAKGTGHELEVAM 293
Query: 337 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 396
QW S YS+++ +AN+I T +GGTH EG +A+LT +N K K +KDKD +L+G+ +
Sbjct: 294 QWNS-GYSESVHTFANTINTHEGGTHEEGFRAALTSVVNKYAKDKKLLKDKDPNLTGDDI 352
Query: 397 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 456
REGL IISV+V P+FEGQTKT+LGN EV+ V ++ E+L+ +LE +P +I++K+
Sbjct: 353 REGLAAIISVKVGEPQFEGQTKTKLGNTEVKSFVQKACNEHLSHWLEANPADAKTIVTKA 412
Query: 457 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 516
+S+ +A +AA++AR+LVR+KS LPGKLADC S P +SEI+IVEGDSAGGSAK G
Sbjct: 413 VSSAQARVAARKARELVRRKSATDLGGLPGKLADCRSNDPSKSEIYIVEGDSAGGSAKSG 472
Query: 517 RDRRFQVIINPLQESIFAFASA 538
RD +Q I+ PL+ I A
Sbjct: 473 RDSMYQAIL-PLRGKIINVEKA 493
>gi|331270701|ref|YP_004397193.1| DNA gyrase subunit B [Clostridium botulinum BKT015925]
gi|329127251|gb|AEB77196.1| DNA gyrase, B subunit [Clostridium botulinum BKT015925]
Length = 635
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 232/460 (50%), Positives = 325/460 (70%), Gaps = 14/460 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y QIQVLEGLEAVRKRP MYIGSTG RGLHHLVYEI+DN++DEA AG+ NI+V +
Sbjct: 5 QVYDESQIQVLEGLEAVRKRPGMYIGSTGIRGLHHLVYEIVDNSIDEALAGFCQNIKVYI 64
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
+NSV+V D+GRG+P+ +HP + +E ++TVLHAGGKFGG S LHGVG S
Sbjct: 65 HKNNSVTVKDDGRGMPVGIHPKMKRPTVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGAS 122
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS+ +V V R+G + Q+Y +GK + L + + +GT + F PD ++F
Sbjct: 123 VVNALSKYCKVEVRREGHVWMQEYKKGKVASELEV----IGDSEERGTLVYFEPDDEIFE 178
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
++FD++T++ R+RELAFLN I L E + E+ E+ + GG++ +V +LN +K
Sbjct: 179 -EVEFDYDTLSHRLRELAFLNKGTRIILVDEREEKEQ----EFHYEGGIKSFVSYLNRNK 233
Query: 315 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+ LH+ + + D +++ALQ+ +D Y+D + +AN+I TI+GGTH+ G K++LTR
Sbjct: 234 QTLHEEPIYVEGNKDDYLVEVALQY-NDTYNDNIFAFANNIDTIEGGTHLAGFKSALTRV 292
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
LN ++ +K+ D +LSG+ REGLT +ISV++ +P+FEGQTKT+LGN EVR +VD
Sbjct: 293 LNDYARRYGYLKETDKNLSGDDTREGLTAVISVKLTDPQFEGQTKTKLGNSEVRGIVDSI 352
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
V E ++E+LE +PD +++ KSL+A +A AAK+AR+L R+KSVL S++LPGKLADCSS
Sbjct: 353 VSERVSEFLEENPDTAKTVIEKSLTAARAREAAKKARELTRRKSVLESTALPGKLADCSS 412
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P E EI+IVEGDSAGGSAKQGRDRRFQ I+ PL+ I
Sbjct: 413 KDPSECEIYIVEGDSAGGSAKQGRDRRFQAIL-PLRGKIM 451
>gi|298345811|ref|YP_003718498.1| DNA topoisomerase [Mobiluncus curtisii ATCC 43063]
gi|304390485|ref|ZP_07372438.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Mobiluncus curtisii
subsp. curtisii ATCC 35241]
gi|298235872|gb|ADI67004.1| DNA topoisomerase (ATP-hydrolyzing) [Mobiluncus curtisii ATCC
43063]
gi|304326241|gb|EFL93486.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Mobiluncus curtisii
subsp. curtisii ATCC 35241]
Length = 686
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 234/488 (47%), Positives = 317/488 (64%), Gaps = 34/488 (6%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + I+VLEGLEAVR RP MYIGSTG RGLHHLVYE++DN+VDE+ AGY +IEV L A
Sbjct: 23 YDASDIRVLEGLEAVRVRPGMYIGSTGERGLHHLVYEVVDNSVDESLAGYCDHIEVTLQA 82
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D V VADNGRGIP+ HP+ ++ +E V+T+LHAGGKFGGSS Y+VSGGLHGVG+SVV
Sbjct: 83 DGGVRVADNGRGIPVAEHPSEHRPTVEVVMTILHAGGKFGGSS--YAVSGGLHGVGISVV 140
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS + TV RDG E+H ++ G V P + GT F+PD ++F T
Sbjct: 141 NALSTKILTTVKRDGYEWHIEFGNGGKVIQPLRRGEPTEET---GTVQVFYPDPEIFET- 196
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKE-----------------DSDPEK--NQYNEY 297
++FD+ T+ R +++AFLN L I L E D+D K + Y
Sbjct: 197 VEFDYETLRTRFQQMAFLNKGLRITLTDERPNVTAEGDFVTGDQDGDADSPKVGRRSVSY 256
Query: 298 FFAGGLEEYVQWLNTDKKP--LHD-VVGFR---KDVD-GITIDLALQWCSDAYSDTMLGY 350
+ GL +YV ++N KK +H+ ++ F +DV+ + +++ALQW S AYS+++ Y
Sbjct: 257 CYENGLHDYVHFINDTKKSEVVHEEIIDFEASLEDVENAMALEIALQWTS-AYSESIYTY 315
Query: 351 ANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPN 410
AN+I T +GGTH EG +A+LT +N +G++ +KDKD +LSG+ REGLT +ISV++ N
Sbjct: 316 ANTINTTEGGTHEEGFRAALTSLMNKVGREKGFIKDKDENLSGDDCREGLTAVISVKIRN 375
Query: 411 PEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRAR 470
P+FEGQTKT+LGN E R V Q+V L ++ + HP +I++K+ SA +A AA++AR
Sbjct: 376 PQFEGQTKTKLGNTEARTFVQQTVYSQLGDWFDAHPAECKAIIAKAQSAQQARNAARKAR 435
Query: 471 DLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQE 530
D R+K+ L S S+PGKL DCSS EIF+VEGDSAGGSA GRD Q I+ PL+
Sbjct: 436 DATRRKTALDSFSMPGKLRDCSSRDASNCEIFLVEGDSAGGSAVAGRDPAHQAIL-PLRG 494
Query: 531 SIFAFASA 538
I A
Sbjct: 495 KILNVEKA 502
>gi|418699886|ref|ZP_13260835.1| DNA gyrase, B subunit [Leptospira interrogans serovar Bataviae str.
L1111]
gi|321401274|gb|ADW83048.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401276|gb|ADW83049.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401280|gb|ADW83051.1| DNA gyrase subunit B [Leptospira interrogans]
gi|410761007|gb|EKR27196.1| DNA gyrase, B subunit [Leptospira interrogans serovar Bataviae str.
L1111]
Length = 639
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/464 (47%), Positives = 311/464 (67%), Gaps = 10/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y + QI++LEGLEAVRKRP MYIG+ GLH +VYE++DN+VDEA AG+ + I++++L
Sbjct: 7 SYSAGQIKILEGLEAVRKRPGMYIGTQDETGLHKMVYEVVDNSVDEAMAGHCTEIKISIL 66
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DN V V DNGRGIP+D+HP S +E V+T+LHAGGKF + Y VSGGLHGVG+SV
Sbjct: 67 PDNIVEVKDNGRGIPVDIHPDKKISTIEVVMTILHAGGKF--ENDAYKVSGGLHGVGVSV 124
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALSE LEV V + G Y QKY +G PV+++ + DS +R GT +RF PD +FTT
Sbjct: 125 VNALSEYLEVEVHQKGKVYTQKYEKGVPVSSVQ---IQGDSSER-GTIVRFKPDATIFTT 180
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
+ F + ++ R RELAFLN L + + E NE+ F+GG+ +V+ +N +K
Sbjct: 181 -VDFQFDVLSARFRELAFLNKGLVLVVEDHRRGKENILRNEFQFSGGIVSFVEHINENKH 239
Query: 316 PLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
P+H V+ F ++ D + ++++Q+ S+ Y++ + + N+I GGTH+EG +A+LTRTLN
Sbjct: 240 PMHKVIHFERNKDDVLAEISIQY-SETYTENIFCFTNNINNNLGGTHLEGFRAALTRTLN 298
Query: 376 SLGKKSKTVKDKD-ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
KK T+ K LSGE V+EGLT +IS+++P P+F QTK +L N E++ ++
Sbjct: 299 DFLKKDSTLSKKHPTGLSGEDVKEGLTAVISIKIPQPQFNSQTKEKLVNAEIKGIMQTLS 358
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E LT + E +P++ IL K + + KA AA++ARDL R+K+VL LPGKLADCS
Sbjct: 359 SEGLTLFFEENPNITKKILEKCILSAKAREAARKARDLTRRKTVLEGGGLPGKLADCSEK 418
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE+++VEGDSAGGSAKQGRDR Q I+ PL+ I A
Sbjct: 419 DPAHSELYLVEGDSAGGSAKQGRDRNTQAIL-PLKGKILNVEKA 461
>gi|315221787|ref|ZP_07863699.1| DNA gyrase, B subunit [Streptococcus anginosus F0211]
gi|315189020|gb|EFU22723.1| DNA gyrase, B subunit [Streptococcus anginosus F0211]
Length = 648
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/466 (48%), Positives = 320/466 (68%), Gaps = 11/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA AG+A++I+V
Sbjct: 10 AEDYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALAGFATHIQVF 69
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++V D+GRGIP+D+ T + A+ETV T+LHAGGKFGG S LHGVG
Sbjct: 70 IEKDNSITVVDDGRGIPVDIQEKTGRPAVETVFTILHAGGKFGGGGYKVSGG--LHGVGS 127
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS L+V V+++G + Q+Y RG V L + DR GT + F PD ++F
Sbjct: 128 SVVNALSTQLDVRVYKNGQIHFQEYRRGHVVADLEI----IGETDRTGTTVHFTPDPEIF 183
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T ++FD + R++ELAFLN L I++ + E Q +Y + GG+ YVQ++N +
Sbjct: 184 TETVEFDFEKLNKRVQELAFLNRGLRISITDKREGLE--QTKDYHYEGGIASYVQYINEN 241
Query: 314 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K + + + ++D IT+++A+Q+ + Y +T++ +AN+I T +GGTH +G + +LTR
Sbjct: 242 KDVIFENPIYTDGEMDDITVEVAMQYTT-GYHETVMSFANNIHTHEGGTHEQGFRTALTR 300
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N KK+K +K+ + +L+GE VREGLT +ISV+ PNP+FEGQTKT+LGN EV K+ ++
Sbjct: 301 VINDYAKKNKLLKENEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVVKITNR 360
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E +++L +P V I+ K + A KA +AAKRAR++ R+KS L S+LPGKLADCS
Sbjct: 361 LFSEAFSDFLLENPAVAKKIVEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLADCS 420
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P E+E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 421 SNDPHETELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 465
>gi|242281240|ref|YP_002993369.1| DNA gyrase subunit B [Desulfovibrio salexigens DSM 2638]
gi|242124134|gb|ACS81830.1| DNA gyrase, B subunit [Desulfovibrio salexigens DSM 2638]
Length = 798
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 232/460 (50%), Positives = 305/460 (66%), Gaps = 13/460 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y +E I VLEGL AVRKRPAMYIGST RGLHHLVYE++DN++DEA GY +V
Sbjct: 4 NQDYSAESITVLEGLAAVRKRPAMYIGSTDIRGLHHLVYEVVDNSIDEAMGGYCDKFKVT 63
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
L DNSV+V+DNGRGIP+D+HP K ALE V+TVLHAGGKF + Y VSGGLHGVG+
Sbjct: 64 LHMDNSVTVSDNGRGIPVDIHPKKKKPALEIVMTVLHAGGKF--DNDAYKVSGGLHGVGV 121
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
S VNALSE LE TV R G Y Q Y RG P L C + GT IRF PD+++F
Sbjct: 122 SCVNALSEHLEATVRRGGKIYRQSYERGVPTGPLEC----IGDAVTTGTTIRFRPDEEIF 177
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T QFD NT+ R RELA+LN L I E S N+ + GG+ +V+ LN
Sbjct: 178 ETN-QFDFNTLKKRFRELAYLNKGLEIEFVDERS----NESASFKADGGIVSFVEDLNKG 232
Query: 314 KKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+ + +++ + D + +LA+Q+ + A+ + +AN+IRT++GGTH+ G K +LTR
Sbjct: 233 QTTVSEIIYAESETDNVITELAVQYNT-AFKENTHTFANNIRTVEGGTHLAGFKGALTRA 291
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N+ + S K I LSG+ VREGLT +ISV++P+P+FEGQTKT+LGN E+ +V
Sbjct: 292 INTYIQNSDLPKKLKIKLSGDDVREGLTAVISVKLPDPQFEGQTKTKLGNSEMVGIVSGM 351
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
V + L+ Y + +P +I+ K + A +A AA++ARDLVR+K L SLPGKLADC S
Sbjct: 352 VYDKLSSYFQENPKDAKAIVEKVVDAARARDAARKARDLVRRKGALSDHSLPGKLADCQS 411
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P ESE+FIVEGDSAGGSAKQGR+ + Q I+ PL+ I
Sbjct: 412 KDPAESELFIVEGDSAGGSAKQGRNPKHQAIL-PLRGKIL 450
>gi|261368839|ref|ZP_05981722.1| DNA gyrase, B subunit [Subdoligranulum variabile DSM 15176]
gi|282569109|gb|EFB74644.1| DNA gyrase, B subunit [Subdoligranulum variabile DSM 15176]
Length = 662
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 238/483 (49%), Positives = 312/483 (64%), Gaps = 18/483 (3%)
Query: 59 LSSSIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNA 118
++ I TE +E YG QIQVLEGLEAVRKRP MYIGSTGP GLHHLVYEI+DN+
Sbjct: 1 MAEEIITETNRETATDHAYGGAQIQVLEGLEAVRKRPGMYIGSTGPSGLHHLVYEIVDNS 60
Query: 119 VDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGS 178
+DEA AGY ++IEV + N + V+DNGRGIP+D+ P A+ V TVLHAGGKFGG
Sbjct: 61 IDEALAGYCTHIEVTIKPGNIIQVSDNGRGIPVDIQPKLGIPAVTVVYTVLHAGGKFGGE 120
Query: 179 SSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKD 238
SGY V+GGLHGVG SVVNALSE L V V RDG EY Q + RGKP L + S
Sbjct: 121 DSGYKVAGGLHGVGASVVNALSEWLTVRVRRDGAEYEQSFQRGKPDGDLK----KIGSAA 176
Query: 239 RQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE--DSD-------P 289
GT + F PD ++F Q+ + T+ R+RE AFLN + I L E +SD P
Sbjct: 177 STGTLVIFKPDPEMFQETTQYRYETLLKRLREEAFLNAGVRITLTDERPESDRPAEEKGP 236
Query: 290 EKNQYNEYF-FAGGLEEYVQWL--NTDKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSD 345
E + +E + GG+ +V +L D PL V + K + G ++ALQ+ ++Y++
Sbjct: 237 ENDGRSETMCYEGGIRSFVSYLCERRDLTPLTPQVMYMKGEGQGAVAEVALQYYDNSYNE 296
Query: 346 TMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIIS 405
+L +AN++ T +GGTH EG K +LTR LN G+ +KDKD +LSG REG+ ++S
Sbjct: 297 LILSFANNVHTPEGGTHEEGFKLALTRVLNEYGRAKGILKDKDENLSGPDAREGIIAVVS 356
Query: 406 VRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALA 465
V++ +FEGQTK +LGN ++ +V+ V + LTEY E +P V +IL K+ A +A A
Sbjct: 357 VKLQEAQFEGQTKAKLGNTFIKGLVNGVVYKALTEYFEENPAVAKAILEKATQAARARAA 416
Query: 466 AKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVII 525
AK+ARDLVR+KS L S+ +PGKLADC P ++E+FIVEGDSAGGSAK GRD Q I+
Sbjct: 417 AKKARDLVRRKSALESNRMPGKLADCHEKDPSKTELFIVEGDSAGGSAKMGRDSNIQAIL 476
Query: 526 NPL 528
PL
Sbjct: 477 -PL 478
>gi|421766841|ref|ZP_16203609.1| DNA gyrase subunit B [Lactococcus garvieae DCC43]
gi|407624637|gb|EKF51372.1| DNA gyrase subunit B [Lactococcus garvieae DCC43]
Length = 652
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/463 (49%), Positives = 318/463 (68%), Gaps = 10/463 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA AG+AS+IEV +
Sbjct: 16 YDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALAGFASHIEVFIEP 75
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNS++V D+GRGIP+D+ T + A+ETV T+LHAGGKFGG S LHGVG SVV
Sbjct: 76 DNSITVIDDGRGIPVDIQEKTGRPAVETVFTILHAGGKFGGGGYKVSGG--LHGVGSSVV 133
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS L+VTV +DG +Y+Q+Y RG L + D +GT + F PD +FT
Sbjct: 134 NALSTQLDVTVHKDGQKYYQEYHRGVVGEDLAI----IGETDIRGTMVHFTPDPTIFTET 189
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
FD+ + R+RELAFLN L I++ + E+N + + + GG++ YV ++N +K+
Sbjct: 190 QVFDYEKLVTRVRELAFLNRGLRISITDKREGQEEN-HAMFHYEGGIQSYVSFINENKEV 248
Query: 317 LHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
+ D + + ++DGIT+++A+Q+ Y T++ +AN+I T +GGTH +G + +LTR +N
Sbjct: 249 IFDTPIYTEGELDGITVEVAMQYTG-TYHSTIMSFANNINTHEGGTHEQGFRTALTRAIN 307
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+ K K +KD + +L+G+ VREGLT +ISV+ PNP+FEGQTKT+LGN EV +V++
Sbjct: 308 NYAKAQKLLKDNEENLTGDDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVTGIVNKLFS 367
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E L ++ +P V I+ K + A KA +AAKRAR++ R+KS L S+LPGKLADCSS
Sbjct: 368 EALQTFMLENPQVAKKIVEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLADCSSND 427
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P+++E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 428 PKQTELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 469
>gi|308066844|ref|YP_003868449.1| DNA gyrase subunit B [Paenibacillus polymyxa E681]
gi|305856123|gb|ADM67911.1| DNA gyrase subunit B [Paenibacillus polymyxa E681]
Length = 636
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 242/467 (51%), Positives = 321/467 (68%), Gaps = 19/467 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y + +IQVLEGLEAVRKRP MYIGST +GLHHLV+E++DN++DEA AGY +I+V +
Sbjct: 7 SYDAGEIQVLEGLEAVRKRPGMYIGSTSAKGLHHLVWEVVDNSIDEALAGYCDSIQVVVH 66
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNSV+V DNGRGIP+ H KSALE V+TVLHAGGKFGG VSGGLHGVG+SV
Sbjct: 67 EDNSVTVTDNGRGIPVSEHAKMKKSALEVVMTVLHAGGKFGGGGY--KVSGGLHGVGVSV 124
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS + V V RDG Y Q+Y RG P V + D GT+ F+PD Q+FT
Sbjct: 125 VNALSSKMIVHVKRDGHLYEQEYHRGAP----QYDVRVIGDTDETGTQTTFYPDDQIFTE 180
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
+D++T+ RIRELAFLN + I+L +D + + + GG+ EYVQ+LN ++
Sbjct: 181 TTVYDYDTLQTRIRELAFLNKGIAISL----TDERTGASDTFHYEGGISEYVQFLNQKRE 236
Query: 316 PLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
LH+ V G R D I +++ALQ+ +D+Y++ + +AN+I T +GGTH G K++LT
Sbjct: 237 ALHEQPIYVEGSR---DMIQVEVALQY-NDSYTENIYSFANNINTHEGGTHESGFKSALT 292
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R +N +K+ +KD + +L+G+ VREGLT IISV++P P+FEGQTKT+LGN EVR +V+
Sbjct: 293 RIINDYARKNGLIKDNNANLTGDDVREGLTAIISVKIPEPQFEGQTKTKLGNSEVRGIVE 352
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
E L E+LE +P V ++ KSL A +A AA++AR+L R+KS L SSLPGKLADC
Sbjct: 353 SLFAEKLQEFLEENPSVSRRVVDKSLQAARAREAARKARELTRRKSALEISSLPGKLADC 412
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
SS SE++IVEGDSAGGSAKQGRDR FQ I+ P++ I A
Sbjct: 413 SSKDASISELYIVEGDSAGGSAKQGRDRHFQAIL-PIRGKILNVEKA 458
>gi|300774234|ref|ZP_07084101.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Sphingobacterium
spiritivorum ATCC 33861]
gi|300758913|gb|EFK55742.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Sphingobacterium
spiritivorum ATCC 33861]
Length = 652
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 230/477 (48%), Positives = 324/477 (67%), Gaps = 19/477 (3%)
Query: 69 KENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS 128
+E + TY ++ IQVLEGLEAVRKRP+MYIG TG +GLHHLVYE++DN++DEA AGY +
Sbjct: 3 EEKKNTSTYSADNIQVLEGLEAVRKRPSMYIGDTGVKGLHHLVYEVVDNSIDEAVAGYCN 62
Query: 129 NIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGL 188
+I V + NS+SV DNGRGIP ++ NKSALE V+TVLHAGGKF + Y VSGGL
Sbjct: 63 DILVTIHEGNSISVQDNGRGIPTGINKKENKSALELVMTVLHAGGKFDKDT--YKVSGGL 120
Query: 189 HGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWP 248
HGVG+S VNALS L V RDG + Q+Y +GKP V + +R GT + F+P
Sbjct: 121 HGVGVSCVNALSTLLIAEVHRDGQIFKQEYEKGKP----KYDVKAIGESERTGTTVTFFP 176
Query: 249 DKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEEY 306
D ++FT ++++T++ R+RELAFLN +LTI +E D + + +F GGL+E+
Sbjct: 177 DPEIFTMTTVYNYDTLSNRLRELAFLNKGIRLTIVDEREILDDGSFRKDVFFSEGGLQEF 236
Query: 307 VQWLNTDKK-----PLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGT 361
V++L+ +++ P++ V G ++ G+ ++LALQ+ +D YS+ + Y N+I TI+GG+
Sbjct: 237 VKFLDGNRQSLISNPIY-VEGIKQ---GVPVELALQY-NDTYSENVHSYVNNINTIEGGS 291
Query: 362 HIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRL 421
H+ G + LTRTL + S +K+ + ++G+ REGLT +ISV+V P+FEGQTKT+L
Sbjct: 292 HVAGFRRGLTRTLKKYAEDSGLLKNLKVEIAGDDFREGLTAVISVKVAEPQFEGQTKTKL 351
Query: 422 GNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRS 481
GN EV VD +V E L+ YLE +P I+ K + A +A AA++AR++V++K+V+
Sbjct: 352 GNNEVMGAVDVAVGEILSTYLEENPREAKMIVQKVVIAAQARAAARKAREMVQRKTVMGG 411
Query: 482 SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S LPGKLADCS P + EIF VEGDSAGG+AKQGRDR+FQ I+ PL+ I A
Sbjct: 412 SGLPGKLADCSDNDPHKCEIFFVEGDSAGGTAKQGRDRKFQAIM-PLRGKILNVEKA 467
>gi|335048216|ref|ZP_08541236.1| DNA gyrase, B subunit [Parvimonas sp. oral taxon 110 str. F0139]
gi|333758016|gb|EGL35574.1| DNA gyrase, B subunit [Parvimonas sp. oral taxon 110 str. F0139]
Length = 638
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/466 (48%), Positives = 316/466 (67%), Gaps = 16/466 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ YG++ I+VL GLE VR RP MYIGSTG +GLHHLVYE++DN++DEA AG I V +
Sbjct: 7 RNYGAKDIKVLTGLEPVRLRPGMYIGSTGVKGLHHLVYEVVDNSIDEALAGVCDTITVTI 66
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DNSV V DNG GIP+++HP T KS LETVLT+LHAGGKF +++ Y VSGGLHGVG+S
Sbjct: 67 FEDNSVRVEDNGSGIPVEVHPQTGKSTLETVLTILHAGGKF--NNNAYQVSGGLHGVGVS 124
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALSE L V RDG Y Q++SRG + L V + GT I F PD ++F
Sbjct: 125 VVNALSEWLIANVKRDGKLYEQQFSRGNATSKLEV----VGTSKETGTIITFKPDSEIFD 180
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTD 313
T I ++ + R RE+AFLN + I E D + E F + GG++ +V+++N +
Sbjct: 181 TTI-YEKEILRNRFREMAFLNKGVKIIFTDERED-----FTETFHYEGGIKSFVEYMNRN 234
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K LH +V+ F+ +++++Q+ +D YS+ +L +AN+I T +GG+H+ G K +LTR
Sbjct: 235 KNSLHSEVIYFQGQRGDSQVEISMQY-TDGYSENVLTFANNIHTPEGGSHLVGFKTALTR 293
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
TLN G+K +KDKD +L G+ REGLT I+S+++PNP+FEGQTK +LGN E R +V+
Sbjct: 294 TLNDYGRKYNLIKDKDANLQGDDTREGLTGIVSIKLPNPQFEGQTKAKLGNSESRGIVEA 353
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ + L +LE +P V I+ K+ S+ +A AA++ARDL R+KS+L +++LPGKL+DC
Sbjct: 354 FLYDNLMTFLEENPKVGKIIIEKAQSSARAREAARKARDLTRKKSILDNTTLPGKLSDCQ 413
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
+ +EI++VEGDSAGGSAKQGRD +FQ ++ PL+ I A
Sbjct: 414 ESDISVNEIYLVEGDSAGGSAKQGRDSKFQAVL-PLKGKIMNVEKA 458
>gi|399574434|ref|ZP_10768193.1| DNA gyrase, B subunit [Halogranum salarium B-1]
gi|399240266|gb|EJN61191.1| DNA gyrase, B subunit [Halogranum salarium B-1]
Length = 618
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/440 (51%), Positives = 303/440 (68%), Gaps = 8/440 (1%)
Query: 97 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 156
MYIGST RGLHHLVYE++DN++DEA AGY NI+V + D+SVSV D+GRGIP+D H
Sbjct: 1 MYIGSTDARGLHHLVYEVVDNSIDEALAGYCDNIDVTIHEDDSVSVEDDGRGIPVDTHEQ 60
Query: 157 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 216
+ A+E ++TVLHAGGKF S Y VSGGLHGVG+SVVNALS +LEV V RDG +
Sbjct: 61 YGRPAVEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSTTLEVEVKRDGSVWTH 118
Query: 217 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 276
++ RG+P V + + GT+IRFWPD +F +++++T+A R+RELAFLN
Sbjct: 119 RFERGEPQVDAFEEVREMRPDEETGTKIRFWPDDDIFEET-EYNYSTLANRLRELAFLNS 177
Query: 277 KLTIALRKE-DSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITID 333
+ I L E D+D +E F + GG++E+V++LN K PLH DVV F + D I ++
Sbjct: 178 GVEITLTDERDTDDAGEPVSEIFRYDGGIKEFVEYLNETKTPLHADVVYFEDEQDNIQVE 237
Query: 334 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 393
+A+Q +D ++ +AN+I T +GGTH+ G K +LTR +N + + D D +L G
Sbjct: 238 VAMQ-ATDELQGSIHSFANNINTREGGTHLTGFKTALTRVVNDYASSNDMLTDLDNNLKG 296
Query: 394 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 453
E VREGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ +V L Y E +P S++
Sbjct: 297 EDVREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESAVHNGLKTYFEENPATAQSVI 356
Query: 454 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 513
K++ A KA AAK+A +L R+KS L SSSLPGKLADC + PEE+E+FIVEGDSAGGSA
Sbjct: 357 MKAVEAAKARQAAKKAEELTRRKSALESSSLPGKLADCQTRKPEEAELFIVEGDSAGGSA 416
Query: 514 KQGRDRRFQVIINPLQESIF 533
KQGRDR+ Q I+ PL+ I
Sbjct: 417 KQGRDRKNQAIL-PLKGKIL 435
>gi|49482258|ref|YP_039482.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MRSA252]
gi|49240387|emb|CAG39033.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MRSA252]
Length = 643
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 243/466 (52%), Positives = 319/466 (68%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 10 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 69
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 70 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 127
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V R+ YHQ Y +G P L V + D+ GT IRF D ++F
Sbjct: 128 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIF 183
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +++ T+ RIRELAFLN + I LR E D E + + Y + GG++ YV+ LN +
Sbjct: 184 TETTVYNYETLQQRIRELAFLNKGIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNEN 242
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 243 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 301
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G SK +K+ LSGE REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 302 VLNSYGLSSKIMKEDKDRLSGEDTREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 361
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P V +++ K + A +A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 362 LFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAREVTRRKSALDVASLPGKLADCS 421
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S +PEE EIF+VEGDSAGGS K GRD R Q I+ PL+ I A
Sbjct: 422 SKSPEECEIFLVEGDSAGGSTKSGRDSRTQAIL-PLRGKILNVEKA 466
>gi|448350241|ref|ZP_21539060.1| DNA gyrase subunit B [Natrialba taiwanensis DSM 12281]
gi|445637748|gb|ELY90896.1| DNA gyrase subunit B [Natrialba taiwanensis DSM 12281]
Length = 644
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/462 (49%), Positives = 315/462 (68%), Gaps = 12/462 (2%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ QIQVLEGLEAVRKRPAMYIGST RGLHHLVYE++DN++DEA AGY I V +
Sbjct: 7 YGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGYCDEITVTIHE 66
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SVSV D+GRGIP+D H ++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVV
Sbjct: 67 DGSVSVTDDGRGIPVDTHEEYDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVV 124
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TT 255
NALS LE V RDG Y + G+P + V ++ + GT IRFWPD +F TT
Sbjct: 125 NALSARLETEVKRDGGVYEHTFETGEPAGDME-RVRDMEPGEATGTTIRFWPDTDIFETT 183
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALR--KEDSDPEKNQYNE-YFFAGGLEEYVQWLNT 312
+ F +T++ R+RELAFLN + I LR +E + + ++ E Y + GG+ E+V++LN
Sbjct: 184 DMAF--STLSNRLRELAFLNSGVRITLRDERESATEDGDELAETYEYQGGIREFVEYLNE 241
Query: 313 DKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
+ +H DV+ F + + +++A+Q + ++ +AN+I T +GGTH+ G K +LT
Sbjct: 242 TRSAMHEDVIYFEDEDQNVRVEVAMQ-ATQELQGSIHAFANNINTREGGTHLTGFKTALT 300
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
R +N ++ + D + +L GE +REGLT +ISV+ P+P+FEGQTKT+LGN EVR VV+
Sbjct: 301 RVVNDYANENDLLSDIEENLKGEDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGVVE 360
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
++ + L Y E HPD +I+ K++ A KA AA++A +L R+KS L S+SLPGKLADC
Sbjct: 361 GAMHDGLGTYFEEHPDTAQAIVMKAVEAAKARKAAQKAEELTRRKSALDSTSLPGKLADC 420
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
+ PE++E+FI EGDSAGGSAKQ R+ FQ ++ P++ I
Sbjct: 421 QTKDPEKAELFIAEGDSAGGSAKQARNPEFQAVL-PIKGKIL 461
>gi|422339824|ref|ZP_16420781.1| DNA gyrase, B subunit [Fusobacterium nucleatum subsp. polymorphum
F0401]
gi|355370667|gb|EHG18047.1| DNA gyrase, B subunit [Fusobacterium nucleatum subsp. polymorphum
F0401]
Length = 635
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/464 (48%), Positives = 309/464 (66%), Gaps = 10/464 (2%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y ++ I VLEGLEAVRKRP MYIG+T RGLHHLV+EI+DN+VDEA AGY IEV +L
Sbjct: 2 SYEAQNITVLEGLEAVRKRPGMYIGTTSERGLHHLVWEIVDNSVDEALAGYCDKIEVKIL 61
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DN + V DNGRGIP D+HP KSALE VLTVLHAGGKF + Y VSGGLHGVG+SV
Sbjct: 62 PDNIIEVVDNGRGIPTDIHPKYRKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGVSV 119
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALSE LEV V + G+ ++QKY RGKP + ++ +D GT +RF D ++F T
Sbjct: 120 VNALSEWLEVEVRKAGVIHYQKYHRGKPEEDV--KIIGSCDEDEHGTIVRFKADTEIFET 177
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV-QWLNTDK 314
I +++ T++ R++ELA+LN LTI L D +K + Y F GG+ +++ + + D
Sbjct: 178 LI-YNYFTLSNRLKELAYLNKGLTITLSDLRKDEKKEE--TYKFDGGILDFLNEIVKEDT 234
Query: 315 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+ + D + +D+ + + + ++ + + N+I T +GGTH++G + +LT+ +
Sbjct: 235 TIIEKPFYISSEQDNVGVDVTFTYTT-SQNEVIYSFVNNINTHEGGTHVQGFRTALTKVI 293
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N +GK +KDKD L G +REG+ I+S ++P P+FEGQTK +LGN EV +V+ V
Sbjct: 294 NDVGKAQGLLKDKDGKLMGNDIREGVVGIVSTKIPQPQFEGQTKGKLGNSEVSGIVNTIV 353
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
L +LE +P++ I+ K L++ KA AA++AR+LV +KSVL SLPGKLADC+S
Sbjct: 354 SNSLKIFLEDNPNITKIIIEKILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSK 413
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
EE EIFIVEGDSAGGSAKQGRDR Q I+ PL+ I A
Sbjct: 414 KAEECEIFIVEGDSAGGSAKQGRDRYNQAIL-PLRGKIINVEKA 456
>gi|315654385|ref|ZP_07907293.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Mobiluncus curtisii
ATCC 51333]
gi|315491420|gb|EFU81037.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Mobiluncus curtisii
ATCC 51333]
Length = 686
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 233/488 (47%), Positives = 318/488 (65%), Gaps = 34/488 (6%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y + I+VLEGLEAVR RP MYIGSTG RGLHHLVYE++DN+VDE+ AGY +IEV L A
Sbjct: 23 YDASDIRVLEGLEAVRVRPGMYIGSTGERGLHHLVYEVVDNSVDESLAGYCDHIEVTLQA 82
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D V VADNGRGIP+ HP+ ++ +E V+T+LHAGGKFGGSS Y+VSGGLHGVG+SVV
Sbjct: 83 DGGVRVADNGRGIPVAEHPSEHRPTVEVVMTILHAGGKFGGSS--YAVSGGLHGVGISVV 140
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS + TV RDG E+H ++ G V P + GT F+PD ++F T
Sbjct: 141 NALSTKILTTVKRDGYEWHIEFGNGGKVIQPLRRGEPTEET---GTVQVFYPDPEIFET- 196
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKE-----------------DSDPEK--NQYNEY 297
++FD+ T+ R +++AFLN L I + E D+D K + Y
Sbjct: 197 VEFDYETLRTRFQQMAFLNKGLRITITDERPNVTAEGDFVTGDQDGDADSPKVGRRSVSY 256
Query: 298 FFAGGLEEYVQWLNTDKKP--LHD-VVGFR---KDVD-GITIDLALQWCSDAYSDTMLGY 350
+ GL +YV ++N KK +H+ ++ F +DV+ + +++ALQW S AYS+++ Y
Sbjct: 257 CYENGLHDYVHFINDTKKSEVVHEEIIDFEASLEDVENAMALEIALQWTS-AYSESIYTY 315
Query: 351 ANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPN 410
AN+I T +GGTH EG +A+LT +N +G++ +KDKD +LSG+ REGLT +ISV++ N
Sbjct: 316 ANTINTTEGGTHEEGFRAALTSLMNKVGREKGFIKDKDENLSGDDCREGLTAVISVKIRN 375
Query: 411 PEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRAR 470
P+FEGQTKT+LGN E R V Q+V L ++ + HP +I++K+ SA +A AA++AR
Sbjct: 376 PQFEGQTKTKLGNTEARTFVQQTVYSQLGDWFDAHPAECKAIIAKAQSAQQARNAARKAR 435
Query: 471 DLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQE 530
D R+K+ L S S+PGKL DCSS + EIF+VEGDSAGGSA GRD Q I+ PL+
Sbjct: 436 DATRRKTALDSFSMPGKLRDCSSRDASDCEIFLVEGDSAGGSAVAGRDPAHQAIL-PLRG 494
Query: 531 SIFAFASA 538
I A
Sbjct: 495 KILNVEKA 502
>gi|6006289|dbj|BAA84773.1| DNA gyrase B subunit [Bacteroides fragilis]
Length = 653
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 315/475 (66%), Gaps = 14/475 (2%)
Query: 69 KENPVSK-TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYA 127
++NP + +Y ++ IQVLEGLEAVRKRPAMYIG +GLHHLVYEI+DN++DEA AGY
Sbjct: 4 EQNPTNNGSYSADSIQVLEGLEAVRKRPAMYIGDISVKGLHHLVYEIVDNSIDEALAGYC 63
Query: 128 SNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGG 187
+IEV + DNS++V DNGRGIP+D H KSALE +TVLHAGGKF S Y VSGG
Sbjct: 64 DHIEVTINEDNSITVQDNGRGIPVDFHEKEQKSALEVAMTVLHAGGKFDKGS--YKVSGG 121
Query: 188 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 247
LHGVG+S VNALS + V+R+G Y Q+Y GKP+ V V D GT+ +FW
Sbjct: 122 LHGVGMSCVNALSTHMTTQVFRNGKIYQQEYEIGKPLYP----VKEVGIADHTGTKQQFW 177
Query: 248 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL--RKEDSDPEKNQYNEYFFAGGLEE 305
PD +FT I +D+ +A R+RELA+LN L I+L R+ ++ ++ ++ GL E
Sbjct: 178 PDDSIFTETI-YDYKILASRLRELAYLNAGLRISLTDRRVVNEDGSFKHETFYSEEGLRE 236
Query: 306 YVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 364
+V+++ + ++ L +DV+ + I I++A+ + + +S+ + Y N+I TI+GGTH+
Sbjct: 237 FVRFIESSREHLINDVIYLNTEKQNIPIEVAIMYNT-GFSENIHSYVNNINTIEGGTHLA 295
Query: 365 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 424
G + +LTRTL + SK ++ + +SG+ REGLT +ISV+V P+FEGQTKT+LGN
Sbjct: 296 GFRRALTRTLKKYAEDSKMLEKVKVEISGDDFREGLTAVISVKVAEPQFEGQTKTKLGNN 355
Query: 425 EVRKVVD-QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 483
EV V+ + E L YLE HP +I+ K + A A AA++AR++V++KS +
Sbjct: 356 EVNGVLPIRRYGEVLNYYLEEHPKEAKAIVDKVILAATARHAARKAREMVQRKSPMSGGG 415
Query: 484 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
LPGKLADCS P++ E+F+VEGDSAGG+AKQGR+R FQ I+ PL+ I A
Sbjct: 416 LPGKLADCSDKDPQKCELFLVEGDSAGGTAKQGRNRAFQAIL-PLRGKILNVEKA 469
>gi|221141520|ref|ZP_03566013.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus str. JKD6009]
gi|257424201|ref|ZP_05600630.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus 55/2053]
gi|257426878|ref|ZP_05603280.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus 65-1322]
gi|257429514|ref|ZP_05605901.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257432161|ref|ZP_05608524.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257435122|ref|ZP_05611173.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M876]
gi|258423233|ref|ZP_05686125.1| DNA gyrase subunit B [Staphylococcus aureus A9635]
gi|282907052|ref|ZP_06314900.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus Btn1260]
gi|282910031|ref|ZP_06317839.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282912279|ref|ZP_06320075.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282912919|ref|ZP_06320711.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M899]
gi|282922547|ref|ZP_06330237.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus C101]
gi|283959489|ref|ZP_06376930.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293511562|ref|ZP_06670256.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M809]
gi|293550171|ref|ZP_06672843.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M1015]
gi|295429302|ref|ZP_06821924.1| hypothetical protein SIAG_01512 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297589196|ref|ZP_06947837.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus MN8]
gi|304379953|ref|ZP_07362682.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|384860687|ref|YP_005743407.1| DNA topoisomerase subunit B [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|384866349|ref|YP_005746545.1| DNA topoisomerase subunit B [Staphylococcus aureus subsp. aureus
TCH60]
gi|384868593|ref|YP_005751307.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus T0131]
gi|387141643|ref|YP_005730036.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus TW20]
gi|415683078|ref|ZP_11448344.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus CGS00]
gi|417888971|ref|ZP_12533071.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21195]
gi|417890994|ref|ZP_12535061.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21200]
gi|418281330|ref|ZP_12894143.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21178]
gi|418281879|ref|ZP_12894677.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21202]
gi|418307216|ref|ZP_12918941.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21194]
gi|418559586|ref|ZP_13124125.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21252]
gi|418565294|ref|ZP_13129704.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21264]
gi|418580682|ref|ZP_13144768.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1605]
gi|418601048|ref|ZP_13164494.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21345]
gi|418872309|ref|ZP_13426653.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-125]
gi|418887938|ref|ZP_13442077.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1524]
gi|418890522|ref|ZP_13444647.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1176]
gi|418896380|ref|ZP_13450457.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
CIGC341D]
gi|418899314|ref|ZP_13453378.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1214]
gi|418907689|ref|ZP_13461707.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG149]
gi|418915846|ref|ZP_13469811.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1267]
gi|418921590|ref|ZP_13475514.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1233]
gi|418947149|ref|ZP_13499537.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-157]
gi|418981974|ref|ZP_13529684.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1242]
gi|418992735|ref|ZP_13540377.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG290]
gi|424786730|ref|ZP_18213514.1| DNA gyrase subunit B [Staphylococcus aureus CN79]
gi|59797755|sp|Q6GKU0.3|GYRB_STAAR RecName: Full=DNA gyrase subunit B
gi|257273219|gb|EEV05321.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus 55/2053]
gi|257276509|gb|EEV07960.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus 65-1322]
gi|257279995|gb|EEV10582.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257283040|gb|EEV13172.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257285718|gb|EEV15834.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M876]
gi|257846562|gb|EEV70584.1| DNA gyrase subunit B [Staphylococcus aureus A9635]
gi|269939531|emb|CBI47889.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus TW20]
gi|282314768|gb|EFB45154.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus C101]
gi|282323019|gb|EFB53338.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M899]
gi|282323975|gb|EFB54291.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282326097|gb|EFB56402.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282329951|gb|EFB59472.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus Btn1260]
gi|283789081|gb|EFC27908.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290919218|gb|EFD96294.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M1015]
gi|291465520|gb|EFF08052.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M809]
gi|295127061|gb|EFG56705.1| hypothetical protein SIAG_01512 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297577707|gb|EFH96420.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus MN8]
gi|302749916|gb|ADL64093.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus str. JKD6008]
gi|304341533|gb|EFM07443.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|312436854|gb|ADQ75925.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus TCH60]
gi|315195231|gb|EFU25619.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus CGS00]
gi|329312728|gb|AEB87141.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus T0131]
gi|341852861|gb|EGS93744.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21200]
gi|341853903|gb|EGS94782.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21195]
gi|365165431|gb|EHM57218.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21178]
gi|365172167|gb|EHM62897.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21202]
gi|365245785|gb|EHM86389.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21194]
gi|371974449|gb|EHO91781.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21264]
gi|371974764|gb|EHO92081.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21252]
gi|374400039|gb|EHQ71162.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21345]
gi|375367363|gb|EHS71326.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-125]
gi|375376834|gb|EHS80348.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-157]
gi|377705406|gb|EHT29711.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1242]
gi|377708099|gb|EHT32391.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1214]
gi|377713874|gb|EHT38082.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1605]
gi|377735389|gb|EHT59422.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1176]
gi|377737693|gb|EHT61703.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1233]
gi|377748742|gb|EHT72698.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG290]
gi|377753673|gb|EHT77590.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1267]
gi|377756551|gb|EHT80448.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1524]
gi|377760519|gb|EHT84398.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG149]
gi|377763107|gb|EHT86964.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
CIGC341D]
gi|421955106|gb|EKU07449.1| DNA gyrase subunit B [Staphylococcus aureus CN79]
Length = 644
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 243/466 (52%), Positives = 319/466 (68%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V R+ YHQ Y +G P L V + D+ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +++ T+ RIRELAFLN + I LR E D E + + Y + GG++ YV+ LN +
Sbjct: 185 TETTVYNYETLQQRIRELAFLNKGIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNEN 243
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 302
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G SK +K+ LSGE REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 303 VLNSYGLSSKIMKEDKDRLSGEDTREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 362
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P V +++ K + A +A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAREVTRRKSALDVASLPGKLADCS 422
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S +PEE EIF+VEGDSAGGS K GRD R Q I+ PL+ I A
Sbjct: 423 SKSPEECEIFLVEGDSAGGSTKSGRDSRTQAIL-PLRGKILNVEKA 467
>gi|255323607|ref|ZP_05364737.1| DNA gyrase, B subunit [Campylobacter showae RM3277]
gi|255299321|gb|EET78608.1| DNA gyrase, B subunit [Campylobacter showae RM3277]
Length = 769
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/461 (46%), Positives = 302/461 (65%), Gaps = 14/461 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG+E I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AGY I++
Sbjct: 1 MQQNYGAENIKVLKGLEAVRKRPGMYIGDTNISGLHHMIYEVVDNSIDEAMAGYCDTIDI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L + S ++DNGRGIP+ +HP SA VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 ELTREGSAIISDNGRGIPVGMHPTEKISAATVVLTVLHAGGKFDKDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L V + RDG + Q++S+G P + L + + +R GT++ FWPD +
Sbjct: 119 VSVVNALSKKLVVNIKRDGKLHRQEFSKGIPQSDLEV----IKNTNRTGTQVEFWPDDSI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD + R RELA+LNPK+TI + D + + + GGLE +V LN
Sbjct: 175 FEVT-EFDDEILTKRFRELAYLNPKITINFK----DQRNGRKESFHYEGGLESFVTDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
++ + V F + + +D AL + +D YS+ +L + N+I+T DGGTH G +A LTR
Sbjct: 230 NE-AVSKAVSFSGGEEDVLVDFALMY-NDTYSENLLSFVNNIKTPDGGTHEAGFRAGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+ + + ++KD ++GE +REGL +ISV+VP P+FEGQTK +LG+ V+ +V +
Sbjct: 288 VITNYIAANAAAREKDTKITGEDIREGLIAVISVKVPEPQFEGQTKGKLGSSYVKPIVQK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
V E L++Y E +P +I+ K+L A + AAK+ARDL R+K L +LPGKLADC
Sbjct: 348 MVFEVLSKYFEENPIEARAIMEKALMAARGREAAKKARDLTRKKEGLSIGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
S P SE+++VEGDSAGGSAKQGRDR FQ I+ PL+ I
Sbjct: 408 SKDPTISELYLVEGDSAGGSAKQGRDRVFQAIL-PLKGKIL 447
>gi|317495092|ref|ZP_07953463.1| DNA gyrase, subunit B [Gemella morbillorum M424]
gi|316914799|gb|EFV36274.1| DNA gyrase, subunit B [Gemella morbillorum M424]
Length = 643
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 231/459 (50%), Positives = 316/459 (68%), Gaps = 11/459 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y ++QIQVLEGLEAVR RP MYIGST RGLHHLV+EI+DN++DEA AGY + I VA+
Sbjct: 13 QEYNADQIQVLEGLEAVRVRPGMYIGSTSSRGLHHLVWEIVDNSIDEALAGYCNTITVAI 72
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DN + V DNGRGIPID+ T K ALE +LTVLHAGGKF GY VSGGLHGVG S
Sbjct: 73 EKDNWIRVEDNGRGIPIDIQEQTGKPALEVILTVLHAGGKF--GGGGYKVSGGLHGVGAS 130
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS +LE V RDG + K+ RG+ V +T + D+ GT +RF D ++F
Sbjct: 131 VVNALSTNLEAYVHRDGKIHSMKFERGEVVQGITV----IGETDKTGTTVRFKADPEIFQ 186
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
++++ + RIRELAFLN +TI L+ E + EK + ++ + GGL EYV+ LN +K
Sbjct: 187 ETTVYEYDILRSRIRELAFLNKGITIVLKDERENQEKEE--DFCYEGGLLEYVEMLNENK 244
Query: 315 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
LH+ + +++G +++++Q+ + YS +L YAN+I T +GGTH G K +LTR +
Sbjct: 245 DALHEAIYVHGEMEGKEVEISMQYNT-GYSSNILSYANNINTHEGGTHESGFKTALTRII 303
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N+ GKK+K +K+K+ +L+G+ VREGL IIS++ PNP+FEGQTKT+LGN E+ + ++
Sbjct: 304 NAYGKKNKLIKEKE-TLTGDDVREGLVAIISIKHPNPQFEGQTKTKLGNSEMSTITNKLF 362
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E L +L +P V I+ K L A +A +AAK+AR+ R+K+ L ++LPGKLADCSS
Sbjct: 363 SEELDRFLLENPKVAKIIVEKGLQASRARIAAKKARESTRRKNALEFTNLPGKLADCSSK 422
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
E E+F+VEGDSAGGSAK GRD +FQ I+ PL+ I
Sbjct: 423 DAAECELFLVEGDSAGGSAKLGRDSKFQAIL-PLKGKIL 460
>gi|168183732|ref|ZP_02618396.1| DNA gyrase, B subunit [Clostridium botulinum Bf]
gi|237793326|ref|YP_002860878.1| DNA gyrase subunit B [Clostridium botulinum Ba4 str. 657]
gi|182673147|gb|EDT85108.1| DNA gyrase, B subunit [Clostridium botulinum Bf]
gi|229263377|gb|ACQ54410.1| DNA gyrase, B subunit [Clostridium botulinum Ba4 str. 657]
Length = 637
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 238/460 (51%), Positives = 322/460 (70%), Gaps = 14/460 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AG+ ++IEV +
Sbjct: 7 QVYDESQIQVLEGLEAVRKRPGMYIGSTSLRGLHHLVYEIVDNSIDEALAGFCTHIEVFI 66
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DNS++V D+GRG+P+ +H K A+E ++T+LHAGGKFGG S LHGVG S
Sbjct: 67 HKDNSITVVDDGRGMPVGMHSKVKKPAVEVIMTILHAGGKFGGGGYKVSGG--LHGVGAS 124
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALSE V V RDG + QKY RG P T L V ++ GT+I F PD ++F
Sbjct: 125 VVNALSEHCNVEVRRDGHIWLQKYERGIPKTGLDI----VGDTEKHGTKIYFKPDVEIFD 180
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
++F+++T+A R+RELAFLN + I+L E D ++ + + GGL +V +LN +K
Sbjct: 181 -ELEFEYDTLAQRLRELAFLNKGIKISLTDERYDKQEM----FHYEGGLRSFVLYLNRNK 235
Query: 315 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+ LH + K+ DG +++A+Q+ +D Y++ + +AN+I TI+GGTH+ G K++LTR
Sbjct: 236 EKLHQQPIYVDKNKDGCIVEIAMQY-NDGYAENIFSFANNIDTIEGGTHLAGFKSALTRA 294
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N +K +KD D +LSG+ VREGLT +ISV++ +P+FEGQTKT+LGN EVR +VD
Sbjct: 295 INDYARKFNYLKDTDKNLSGDDVREGLTAVISVKLTDPQFEGQTKTKLGNSEVRGIVDTI 354
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
V E + +LE +P+V I+ K LSA +A AAKRAR+L R+KSVL S+SLPGKLADCSS
Sbjct: 355 VGESIGSFLEENPNVGKIIIEKGLSASRAREAAKRARELTRRKSVLESTSLPGKLADCSS 414
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P EI++VEGDSAGGSAKQGR+R FQ I+ PL+ I
Sbjct: 415 KDPSLCEIYLVEGDSAGGSAKQGRNREFQAIL-PLKGKIM 453
>gi|225848548|ref|YP_002728711.1| DNA gyrase subunit beta [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644043|gb|ACN99093.1| DNA gyrase, B subunit [Sulfurihydrogenibium azorense Az-Fu1]
Length = 809
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/464 (49%), Positives = 312/464 (67%), Gaps = 16/464 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +E IQ + GL+ VR RPAMYIG G RGLHHLV+EILDNAVDEA AGYA NI V +
Sbjct: 11 YSAEAIQAVTGLDHVRARPAMYIGDIGERGLHHLVWEILDNAVDEAMAGYAKNITVIIHQ 70
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D SV+V D+GRGIP+D+HP A+E V T+L AGGKF S Y SGGLHGVG SVV
Sbjct: 71 DGSVTVEDDGRGIPVDIHPEFKIPAVEMVFTILGAGGKF--SKKAYQYSGGLHGVGASVV 128
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TT 255
NALS L V V+R+G Y Q+YS GKPV L V ++GT++ F PD +F TT
Sbjct: 129 NALSSWLVVEVYRNGKIYRQEYSYGKPVYPLKV----VGDTTKRGTKVTFKPDDSIFETT 184
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKK 315
I+FD I R+RELAFLNP + + D K+ E++F G+ ++V+ LN K+
Sbjct: 185 TIKFD--IIQKRVRELAFLNPGVRFVV----IDERKDIKEEFYFENGIVDFVRVLNQAKE 238
Query: 316 PLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
PL D V+ + + DG+ +++A Q+ +Y++ + + N+I+T++GGTH+ G +A+LTR++
Sbjct: 239 PLFDEVIYVKGEKDGVLVEVAFQYTK-SYNEVIESFVNNIKTVEGGTHVSGFRAALTRSM 297
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
N K K+ +SG+ +REGLT +ISV+VP P+FEGQTKT+LGN +V+++V+ V
Sbjct: 298 NKTLSGMKLPKELKSGVSGDDLREGLTAVISVKVPEPQFEGQTKTKLGNQDVKRIVESVV 357
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
+YL EY E + D+ I K++ A A AA++A+++ R+KS L SSLPGKLADCS +
Sbjct: 358 GDYLLEYFEKNKDIALKIAEKAIEAAIAREAARKAKEISRRKSFLEDSSLPGKLADCSES 417
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P+ E+FIVEG+SAGGSAKQGRDRR Q I+ PL+ I A
Sbjct: 418 DPQLCELFIVEGESAGGSAKQGRDRRTQAIL-PLKGKILNVEKA 460
>gi|358051218|ref|ZP_09145436.1| DNA gyrase subunit B [Staphylococcus simiae CCM 7213]
gi|357259294|gb|EHJ09133.1| DNA gyrase subunit B [Staphylococcus simiae CCM 7213]
Length = 644
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 239/466 (51%), Positives = 317/466 (68%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TENYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANKIEVI 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 71 IQEDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALSE LEV V+R+ YHQ Y +G P L V + D GT IRF D +F
Sbjct: 129 SVVNALSEDLEVYVYRNDTIYHQAYKKGVPQFDLK----EVGTTDVTGTTIRFKADGSIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +++ T+ RIRELAFLN + I L K++ D E + + Y + GG++ YV+ LN +
Sbjct: 185 TETQVYNYETLQQRIRELAFLNKGIEITL-KDERDKENIREDSYHYEGGIKSYVELLNEN 243
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+PL+D + + D + +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPLYDEPIYIHQSKDDVEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 302
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LN+ G SK +K+ L+GE REG+T I+S++ +P+FEGQTKT+LGN EVR++VD+
Sbjct: 303 VLNNYGLNSKIMKEDKERLTGEDTREGMTAIVSIKHSDPQFEGQTKTKLGNSEVRQIVDK 362
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P V I+ K + A A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPQVARVIVDKGIMASHARVAAKKAREVTRRKSALDVASLPGKLADCS 422
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PEE EIF+VEGDSAGGS K GRD R Q I+ PL+ I A
Sbjct: 423 SKVPEECEIFLVEGDSAGGSTKSGRDSRTQAIL-PLRGKILNVEKA 467
>gi|284023042|ref|ZP_06377440.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 132]
Length = 644
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 243/466 (52%), Positives = 320/466 (68%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V R+ YHQ Y +G P L V + D+ GT IRF D ++F
Sbjct: 129 SVVNALSQVLEVYVHRNETIYHQAYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +++ T+ RIRELAFLN + I LR E D E + + Y + GG++ YV+ LN +
Sbjct: 185 TETTVYNYETLQQRIRELAFLNKGIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNEN 243
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 302
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G SK +K++ LSGE REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 303 VLNSYGLSSKIMKEEKDRLSGEDTREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 362
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P V +++ K + A +A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAREVTRRKSALDVASLPGKLADCS 422
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S +PEE EIF+VEGDSAGGS K GRD R Q I+ PL+ I A
Sbjct: 423 SKSPEECEIFLVEGDSAGGSTKSGRDSRTQAIL-PLRGKILNVEKA 467
>gi|384548928|ref|YP_005738180.1| DNA topoisomerase (ATP-hydrolyzing) subunit B, GyrB [Staphylococcus
aureus subsp. aureus JKD6159]
gi|302331777|gb|ADL21970.1| DNA topoisomerase (ATP-hydrolyzing) subunit B, GyrB [Staphylococcus
aureus subsp. aureus JKD6159]
Length = 644
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 243/466 (52%), Positives = 319/466 (68%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V R+ YHQ Y +G P L V + D+ GT IRF D ++F
Sbjct: 129 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +++ T+ RIRELAFLN + I LR E D E + + Y + GG++ YV+ LN
Sbjct: 185 TETTVYNYETLQQRIRELAFLNKGIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNEK 243
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 302
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G SK +K++ LSGE REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 303 VLNSYGLSSKIMKEEKDRLSGEDTREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 362
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P V +++ K + A +A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAREVTRRKSALDVASLPGKLADCS 422
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S +PEE EIF+VEGDSAGGS K GRD R Q I+ PL+ I A
Sbjct: 423 SKSPEECEIFLVEGDSAGGSTKSGRDSRTQAIL-PLRGKILNVEKA 467
>gi|78188013|ref|YP_378351.1| DNA gyrase subunit B [Chlorobium chlorochromatii CaD3]
gi|78170212|gb|ABB27308.1| DNA gyrase subunit B [Chlorobium chlorochromatii CaD3]
Length = 637
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/467 (49%), Positives = 311/467 (66%), Gaps = 23/467 (4%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
YG+ IQVL+G+E VR RPAMYIG RGLHHLVYEI+DN++DE G+ I VAL A
Sbjct: 6 YGATNIQVLDGIEHVRMRPAMYIGDIHSRGLHHLVYEIVDNSIDETLGGFNDYIFVALNA 65
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
D S++V D+GRGIP+D+HP KSALE V+TV+ AGGKF Y VSGGLHGVG SVV
Sbjct: 66 DGSITVIDHGRGIPVDMHPEKQKSALELVMTVIGAGGKF--DKGAYKVSGGLHGVGASVV 123
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALSE EV V+RDG Y+Q+Y RG P V + D++GT+ F PD +F T
Sbjct: 124 NALSEWCEVEVYRDGKAYYQRYERGVP----QGDVKVIGDSDQRGTKTTFMPDGTIFKTT 179
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW-----LN 311
+F I R+RELAFLN L I ++ + + E E+ F GG+ E+V++ LN
Sbjct: 180 -EFRKEIIIDRMRELAFLNKNLRIIVQDTNGEQE-----EFHFEGGICEFVRFTDQNRLN 233
Query: 312 TDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 371
++P++ + G R DG +++ALQ+ +D+Y + + Y N+I T +GGTH+ G + +LT
Sbjct: 234 LLREPIY-LYGER---DGTVVEIALQY-NDSYQENVFSYVNNINTHEGGTHVTGFRKALT 288
Query: 372 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 431
RTLNS +K+ +K+ ++L+G+ +EGLT +ISV+V P+FEGQTKT+LGN E + +V+
Sbjct: 289 RTLNSYAQKNDLLKNLKLTLTGDDFKEGLTAVISVKVAEPQFEGQTKTKLGNSETQSIVE 348
Query: 432 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 491
V + L E+ E +P+ L I+ K A + AA++A++L R+KSVL SS LPGKLADC
Sbjct: 349 TVVNDQLAEFAESNPNTLKLIIEKVKGAAMSREAARKAKELTRRKSVLESSGLPGKLADC 408
Query: 492 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PE E++IVEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 409 SINDPEHCELYIVEGDSAGGSAKQGRDRSFQAIL-PLKGKILNVEKA 454
>gi|386727827|ref|YP_006194210.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus 71193]
gi|387601296|ref|YP_005732817.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus ST398]
gi|418309629|ref|ZP_12921181.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21331]
gi|418980540|ref|ZP_13528319.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus DR10]
gi|283469234|emb|CAQ48445.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus ST398]
gi|365238435|gb|EHM79271.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21331]
gi|379991710|gb|EIA13176.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus DR10]
gi|384229120|gb|AFH68367.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus 71193]
Length = 644
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 243/466 (52%), Positives = 319/466 (68%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 11 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 70
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 71 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 128
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V R+ YHQ Y +G P L V + D+ GT IRF D +F
Sbjct: 129 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGTTDKTGTVIRFKADGDIF 184
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +++ T+ RIRELAFLN + I LR E D E + + Y + GG++ YV+ LN +
Sbjct: 185 TETTVYNYETLQQRIRELAFLNKGIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNEN 243
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 244 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 302
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G SK +K++ LSGE REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 303 VLNSYGLSSKIMKEEKDRLSGEDTREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 362
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P V +++ K + A +A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 363 LFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAREVTRRKSALDVASLPGKLADCS 422
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S +PEE EIF+VEGDSAGGS K GRD R Q I+ PL+ I A
Sbjct: 423 SKSPEECEIFLVEGDSAGGSTKSGRDSRTQAIL-PLRGKILNVEKA 467
>gi|290889525|ref|ZP_06552615.1| hypothetical protein AWRIB429_0005 [Oenococcus oeni AWRIB429]
gi|419759164|ref|ZP_14285470.1| DNA gyrase subunit B [Oenococcus oeni AWRIB304]
gi|419857277|ref|ZP_14379987.1| DNA gyrase subunit B [Oenococcus oeni AWRIB202]
gi|421183939|ref|ZP_15641368.1| DNA gyrase subunit B [Oenococcus oeni AWRIB318]
gi|421188527|ref|ZP_15645864.1| DNA gyrase subunit B [Oenococcus oeni AWRIB419]
gi|421190367|ref|ZP_15647669.1| DNA gyrase subunit B [Oenococcus oeni AWRIB422]
gi|421191240|ref|ZP_15648518.1| DNA gyrase subunit B [Oenococcus oeni AWRIB548]
gi|421195786|ref|ZP_15652989.1| DNA gyrase subunit B [Oenococcus oeni AWRIB568]
gi|421196263|ref|ZP_15653452.1| DNA gyrase subunit B [Oenococcus oeni AWRIB576]
gi|290480723|gb|EFD89357.1| hypothetical protein AWRIB429_0005 [Oenococcus oeni AWRIB429]
gi|399904086|gb|EJN91548.1| DNA gyrase subunit B [Oenococcus oeni AWRIB304]
gi|399965007|gb|EJN99634.1| DNA gyrase subunit B [Oenococcus oeni AWRIB419]
gi|399968576|gb|EJO03009.1| DNA gyrase subunit B [Oenococcus oeni AWRIB318]
gi|399970270|gb|EJO04575.1| DNA gyrase subunit B [Oenococcus oeni AWRIB422]
gi|399972367|gb|EJO06568.1| DNA gyrase subunit B [Oenococcus oeni AWRIB548]
gi|399974912|gb|EJO08981.1| DNA gyrase subunit B [Oenococcus oeni AWRIB568]
gi|399977463|gb|EJO11443.1| DNA gyrase subunit B [Oenococcus oeni AWRIB576]
gi|410498342|gb|EKP89798.1| DNA gyrase subunit B [Oenococcus oeni AWRIB202]
Length = 652
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/466 (48%), Positives = 316/466 (67%), Gaps = 9/466 (1%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ +YG IQ+LEGLEAVRKRP MYIGST GLHHLV+EI+DN +DEA AG+A ++ +
Sbjct: 15 NNSYGGSSIQILEGLEAVRKRPGMYIGSTASSGLHHLVWEIIDNGIDEALAGFAHHVTLT 74
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS+++ D+GRG+P+++ P T + A+E V T+LHAGGKF S Y VSGGLHGVG
Sbjct: 75 IEKDNSITITDDGRGVPVEIQPKTGRPAMEAVFTILHAGGKF--DSKSYKVSGGLHGVGA 132
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ ++V V+RD Y+ + RG T + P+ K +GT + F PD +F
Sbjct: 133 SVVNALSKEMDVRVYRDNKIYYMDFERGHIKTEMKLLDEPMRLK--RGTIVHFAPDPDIF 190
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
I FD+ T+A RIRELAFLN L +++ + DP KN+ + + GG+ EYV++LN +
Sbjct: 191 RETIVFDYRTLASRIRELAFLNKGLRLSITDKRVDPVKNE--SFMYEGGIAEYVKFLNKN 248
Query: 314 KKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+PL + V + +GI +++ALQ+ +DA ++T++ +AN+I T +GGTH G K +LTR
Sbjct: 249 KQPLFPEPVYVEGEENGIQVEVALQY-TDAVAETLMSFANNIHTHEGGTHETGFKMALTR 307
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N KK +KD D LSGE VREG+T I+S++ P+P+FEGQTKT+LGN + ++VV+
Sbjct: 308 IINDYAKKKGILKDSDDPLSGEDVREGITAIVSIKHPDPQFEGQTKTKLGNTDAQQVVNH 367
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
++ +P+ +I +K L A KA AAK+ARDL R+KS L S+L GKLAD +
Sbjct: 368 QFSTIFNRFMMENPETARAIANKGLIASKARAAAKKARDLTRKKSGLEISALAGKLADNT 427
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S PE SE+FIVEGDSAGGSAKQGR R Q I+ P++ I A
Sbjct: 428 SRDPEISELFIVEGDSAGGSAKQGRSRLTQAIL-PIRGKILNVEKA 472
>gi|57506226|ref|ZP_00372145.1| DNA gyrase, B subunit [Campylobacter upsaliensis RM3195]
gi|57015494|gb|EAL52289.1| DNA gyrase, B subunit [Campylobacter upsaliensis RM3195]
Length = 770
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/466 (46%), Positives = 311/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I++
Sbjct: 1 MQENYGEGNIKVLKGLEAVRKRPGMYIGDTNINGLHHMIYEVVDNSIDEAMAGHCDTIDI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L + S V+DNGRGIP+ +HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 ELTTEGSCIVSDNGRGIPVGMHPTENMPTLTVVLTVLHAGGKFDQDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++++G+ + + + GT I F+PD+++
Sbjct: 119 VSVVNALSKKLVATVQREGKIYRQEFAKGQIASEFGI----IGESKKTGTSIEFFPDEEI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LNPK+TI + D+ +N+ + F GG+ ++V LN
Sbjct: 175 FELT-EFDYEILAKRFRELAYLNPKITINFK--DNRVGRNE--SFHFEGGISQFVSDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D D + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KQALTKPIFFSVDEDNVNVEIALLY-NDTYSENLLSFVNNIKTPDGGTHETGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+ + + + + ++KD ++GE VREGL I+SV+VP P+FEGQTK +LG+ VR +V++
Sbjct: 288 VITNYVETNASAREKDNKITGEDVREGLIAIVSVKVPEPQFEGQTKGKLGSSYVRPIVNK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYL++Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLSKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSIGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERAFQAIL-PLRGKILNVEKA 452
>gi|424835717|ref|ZP_18260376.1| DNA gyrase subunit B [Clostridium sporogenes PA 3679]
gi|365977587|gb|EHN13685.1| DNA gyrase subunit B [Clostridium sporogenes PA 3679]
Length = 637
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 238/460 (51%), Positives = 322/460 (70%), Gaps = 14/460 (3%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ Y QIQVLEGLEAVRKRP MYIGST RGLHHLVYEI+DN++DEA AG+ ++IEV +
Sbjct: 7 QVYDESQIQVLEGLEAVRKRPGMYIGSTSLRGLHHLVYEIVDNSIDEALAGFCTHIEVFI 66
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
DNS++V D+GRG+P+ +H K A+E ++T+LHAGGKFGG S LHGVG S
Sbjct: 67 HKDNSITVVDDGRGMPVGMHSKVKKPAVEVIMTILHAGGKFGGGGYKVSGG--LHGVGAS 124
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALSE V V RDG + QKY RG P T L V ++ GT+I F PD ++F
Sbjct: 125 VVNALSEHCNVEVRRDGHIWLQKYERGIPKTGLDI----VGDTEKHGTKIYFKPDVEIFD 180
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
++F+++T+A R+RELAFLN + I+L E D ++ + + GGL +V +LN +K
Sbjct: 181 -ELEFEYDTLAQRLRELAFLNKGIKISLTDERYDKQEM----FHYEGGLRSFVLYLNRNK 235
Query: 315 KPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 373
+ LH + K+ DG +++A+Q+ +D Y++ + +AN+I TI+GGTH+ G K++LTR
Sbjct: 236 EKLHQQPIYVDKNKDGCIVEIAMQY-NDGYAENIFSFANNIDTIEGGTHLAGFKSALTRA 294
Query: 374 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 433
+N +K +KD D +LSG+ VREGLT +ISV++ +P+FEGQTKT+LGN EVR +VD
Sbjct: 295 INDYARKFNYLKDIDKNLSGDDVREGLTAVISVKLTDPQFEGQTKTKLGNSEVRGIVDTI 354
Query: 434 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 493
V E + +LE +P+V I+ K LSA +A AAKRAR+L R+KSVL S+SLPGKLADCSS
Sbjct: 355 VGESIGSFLEENPNVGKIIIEKGLSASRAREAAKRARELTRRKSVLESTSLPGKLADCSS 414
Query: 494 TTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIF 533
P EI++VEGDSAGGSAKQGR+R FQ I+ PL+ I
Sbjct: 415 KDPSLCEIYLVEGDSAGGSAKQGRNREFQAIL-PLKGKIM 453
>gi|313681133|ref|YP_004058871.1| DNA gyrase subunit b [Sulfuricurvum kujiense DSM 16994]
gi|313153993|gb|ADR32671.1| DNA gyrase subunit B [Sulfuricurvum kujiense DSM 16994]
Length = 771
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/464 (47%), Positives = 302/464 (65%), Gaps = 13/464 (2%)
Query: 75 KTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL 134
+ YG+ I+VL+GLEAVRKRP MYIG TG RGLHHL+YE++DN++DEA AG+ I V L
Sbjct: 2 ENYGASNIKVLKGLEAVRKRPGMYIGDTGHRGLHHLIYEVVDNSIDEAMAGHCDTITVTL 61
Query: 135 LADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLS 194
+ + V+DNGRGIP D+HP SA VLTVLHAGGKF + Y VSGGLHGVG+S
Sbjct: 62 TKNGTAIVSDNGRGIPTDMHPTEGISAATVVLTVLHAGGKFDKDT--YKVSGGLHGVGVS 119
Query: 195 VVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT 254
VVNALS L++T+ R+G + Q + G P L + ++GT I F+PD +FT
Sbjct: 120 VVNALSSDLKMTIHREGQSFEQNFKCGIPQEPLAITG----TTRKRGTTIEFFPDPSIFT 175
Query: 255 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 314
I FD++ +A R RELA+LNP++TI + D N Y F GG+ ++V +N K
Sbjct: 176 ETIIFDYDYLAKRFRELAYLNPRITIIFK----DERNGASNTYHFEGGISQFVTDVNK-K 230
Query: 315 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 374
+ F + ++ I +D+A+ + +D+Y D + N+I T +GGTH G +A LTR +
Sbjct: 231 TVVASPFAFSEKIEDIEMDIAIMY-NDSYDDKTFTFVNNINTPNGGTHEAGFRAGLTRVI 289
Query: 375 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 434
++ K++ K+KD+ L+GE V EGL C++SVRVP P+FEGQTK +LGN VR +V +
Sbjct: 290 SNYNKQNGNAKEKDVPLTGEDVSEGLICVVSVRVPEPQFEGQTKGKLGNTYVRPLVQKVT 349
Query: 435 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 494
E LT+Y E +P +I+ K+L A + AAK+AR+L R+K + +LPGKLADC S
Sbjct: 350 YEKLTKYFEENPLQAKAIVQKALMAARGREAAKKARELTRRKDAMTVGTLPGKLADCQSK 409
Query: 495 TPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P SE+++VEGDSAGGSAKQGRDR FQ I+ PL+ I A
Sbjct: 410 DPAISELYLVEGDSAGGSAKQGRDRVFQAIL-PLKGKILNVEKA 452
>gi|438000917|ref|YP_007270660.1| DNA gyrase subunit B [Tepidanaerobacter acetatoxydans Re1]
gi|432177711|emb|CCP24684.1| DNA gyrase subunit B [Tepidanaerobacter acetatoxydans Re1]
Length = 640
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/463 (48%), Positives = 314/463 (67%), Gaps = 14/463 (3%)
Query: 77 YGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLA 136
Y +I+VLEG+E VR RP MYIGST RGLHHLVYE++DN++DEA AGY NI+V +
Sbjct: 12 YDENKIEVLEGIEHVRLRPGMYIGSTDSRGLHHLVYEVVDNSIDEAMAGYCKNIKVTINK 71
Query: 137 DNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVV 196
DNSV+V D+GRGIP+ + P KSALE LT+LHAGGKF +S GY VSGGLHGVG+SVV
Sbjct: 72 DNSVTVEDDGRGIPVKIQPKVGKSALEVALTMLHAGGKF--NSGGYKVSGGLHGVGVSVV 129
Query: 197 NALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA 256
NALS +EV V RDG ++QKY RGKPVT V+ + GT+I F PD ++F
Sbjct: 130 NALSSWMEVEVKRDGGIFYQKYERGKPVT----DVIRKGDTEETGTKITFMPDNEIFEDT 185
Query: 257 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 316
+ F + + R+RE AFLN + I L D N + + GG+ +V++LN +
Sbjct: 186 V-FSQDILTQRLREQAFLNRGIRIEL----FDERTGNSNVFHYEGGIVSFVKYLNRKRDV 240
Query: 317 LHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 375
LH+ + D + +++A+Q+ +D+Y +T+L +AN+I T +GGTH+ G + +LTR++N
Sbjct: 241 LHEKPIYMSAARDDMEVEVAMQY-NDSYLETVLTFANNINTHEGGTHLSGFRTALTRSMN 299
Query: 376 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 435
+K +K++D +LSGE VREGLT +ISV++ NP+FEGQTKT+LGN E+R +VD V
Sbjct: 300 DYMRKMNLLKEQDANLSGEDVREGLTAVISVKLTNPQFEGQTKTKLGNSEIRSLVDTVVG 359
Query: 436 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 495
E ++ +LE +P + I+ K+L A +A AA++AR+L R+K+ L ++LPGKLADC
Sbjct: 360 EGISRFLEENPAIARVIVEKALGAARAREAARKARELTRRKTALEHTTLPGKLADCRERD 419
Query: 496 PEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
P E+++VEGDSAGGSAKQGRD + Q I+ PL+ I A
Sbjct: 420 PRLCELYLVEGDSAGGSAKQGRDPQIQAIL-PLRGKILNVEKA 461
>gi|418953131|ref|ZP_13505137.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-189]
gi|418984497|ref|ZP_13532192.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1500]
gi|375375648|gb|EHS79218.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-189]
gi|377710096|gb|EHT34348.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1500]
Length = 640
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 243/466 (52%), Positives = 319/466 (68%), Gaps = 10/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
+ YG+ QIQVLEGLEAVRKRP MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV
Sbjct: 7 TDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVV 66
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DN + V DNGRGIP+D+ + A+E +LTVLHAGGKFGG VSGGLHGVG
Sbjct: 67 IEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGS 124
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS+ LEV V R+ YHQ Y +G P L V + D+ GT IRF D ++F
Sbjct: 125 SVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIF 180
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T +++ T+ RIRELAFLN + I LR E D E + + Y + GG++ YV+ LN +
Sbjct: 181 TETTVYNYETLQQRIRELAFLNKGIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNEN 239
Query: 314 KKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+P+HD + + D I +++A+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR
Sbjct: 240 KEPIHDEPIYIHQSKDDIEVEIAIQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTR 298
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
LNS G SK +K+ LSGE REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+
Sbjct: 299 VLNSYGLSSKIMKEDKDRLSGEDTREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDK 358
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E+ +L +P V +++ K + A +A +AAK+AR++ R+KS L +SLPGKLADCS
Sbjct: 359 LFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAREVTRRKSALDVASLPGKLADCS 418
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S +PEE EIF+VEGDSAGGS K GRD R Q I+ PL+ I A
Sbjct: 419 SKSPEECEIFLVEGDSAGGSTKSGRDSRTQAIL-PLRGKILNVEKA 463
>gi|256846674|ref|ZP_05552130.1| DNA gyrase, B subunit [Fusobacterium sp. 3_1_36A2]
gi|294784381|ref|ZP_06749672.1| DNA gyrase, B subunit [Fusobacterium sp. 3_1_27]
gi|256717894|gb|EEU31451.1| DNA gyrase, B subunit [Fusobacterium sp. 3_1_36A2]
gi|294487953|gb|EFG35308.1| DNA gyrase, B subunit [Fusobacterium sp. 3_1_27]
Length = 639
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/468 (48%), Positives = 310/468 (66%), Gaps = 18/468 (3%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
+Y ++ I VLEGLEAVRKRP MYIG+T RGLHHLV+EI+DN+VDEA AGY IEV +L
Sbjct: 6 SYEAQNITVLEGLEAVRKRPGMYIGTTSERGLHHLVWEIVDNSVDEALAGYCDKIEVKIL 65
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DN + V DNGRGIP D+HP KSALE VLTVLHAGGKF + Y VSGGLHGVG+SV
Sbjct: 66 PDNIIEVIDNGRGIPTDIHPKYGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGVSV 123
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALSE LEV V ++G ++QKY RGKP + V+ + GT +RF D ++F T
Sbjct: 124 VNALSEWLEVEVRKNGTIHYQKYHRGKPEEDV--KVIGTCDESEHGTIVRFKADGEIFET 181
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD-- 313
I +++ T++ R++ELA+LN LTI L D +K + Y F GG+ +++ + D
Sbjct: 182 LI-YNYFTLSNRLKELAYLNKGLTITLSDLRKDEKKEE--TYKFDGGILDFLNEIVKDDT 238
Query: 314 ---KKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 370
+KP + + D + +D+ + + + ++ + + N+I T +GGTH++G + +L
Sbjct: 239 TIIEKPFY----VSSEQDNVGVDVTFTYTT-SQNEVIYSFVNNINTHEGGTHVQGFRTAL 293
Query: 371 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 430
T+ +N +GK +KDKD L G +REG+ I+S ++P P+FEGQTK +LGN EV +V
Sbjct: 294 TKVINDVGKAQGLLKDKDGKLMGNDIREGVVGIVSTKIPQPQFEGQTKGKLGNSEVSGIV 353
Query: 431 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 490
+ V L +LE +P++ I+ K L++ KA AA++AR+LV +KSVL SLPGKLAD
Sbjct: 354 NTIVSNSLKIFLEDNPNITKIIIEKILNSKKAREAAQKARELVLRKSVLEVGSLPGKLAD 413
Query: 491 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
C+S EE EIFIVEGDSAGGSAKQGRDR Q I+ PL+ I A
Sbjct: 414 CTSKKAEECEIFIVEGDSAGGSAKQGRDRYNQAIL-PLRGKIINVEKA 460
>gi|423070677|ref|ZP_17059453.1| DNA gyrase subunit B [Streptococcus intermedius F0413]
gi|355365233|gb|EHG12957.1| DNA gyrase subunit B [Streptococcus intermedius F0413]
Length = 648
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/466 (48%), Positives = 320/466 (68%), Gaps = 11/466 (2%)
Query: 74 SKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVA 133
++ Y + QIQVLEGLEAVR RP MYIGST GLHHLV+EI+DN++DEA AG+A++I+V
Sbjct: 10 AQDYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALAGFATHIQVF 69
Query: 134 LLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 193
+ DNS++V D+GRGIP+D+ T + A+ETV T+LHAGGKFGG S LHGVG
Sbjct: 70 IEKDNSITVVDDGRGIPVDIQEKTGRPAVETVFTILHAGGKFGGGGYKVSGG--LHGVGS 127
Query: 194 SVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF 253
SVVNALS L+V V+++G + Q+Y RG+ V L + DR GT + F PD ++F
Sbjct: 128 SVVNALSTQLDVRVYKNGQIHFQEYRRGQVVADLKI----IGETDRTGTTVHFTPDPEIF 183
Query: 254 TTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD 313
T ++FD + R++ELAFLN L I++ + E Q +Y + GG+ YVQ++N +
Sbjct: 184 TETVEFDFEKLNKRVQELAFLNRGLRISITDKREGLE--QTKDYHYEGGIASYVQYINEN 241
Query: 314 KKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K + + + ++D IT+++A+Q+ + Y +T++ +AN+I T +GGTH +G + +LTR
Sbjct: 242 KDVIFENPIYTDGEMDDITVEVAIQYTT-GYHETVMSFANNIHTHEGGTHEQGFRTALTR 300
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+N KK+K +K+ + +L+GE VREGL +ISV+ PNP+FEGQTKT+LGN EV K+ ++
Sbjct: 301 VINDYAKKNKLLKENEDNLTGEDVREGLAAVISVKHPNPQFEGQTKTKLGNSEVVKITNR 360
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
E +++L +P V I+ K + A KA +AAKRAR++ R+KS L S+LPGKLADCS
Sbjct: 361 LFSEAFSDFLLENPAVAKKIIEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLADCS 420
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P E+E+FIVEGDSAGGSAK GR+R FQ I+ P++ I A
Sbjct: 421 SNDPHETELFIVEGDSAGGSAKSGRNREFQAIL-PIRGKILNVEKA 465
>gi|423326757|ref|ZP_17304565.1| DNA gyrase, B subunit [Myroides odoratimimus CCUG 3837]
gi|404608114|gb|EKB07597.1| DNA gyrase, B subunit [Myroides odoratimimus CCUG 3837]
Length = 646
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/470 (46%), Positives = 309/470 (65%), Gaps = 19/470 (4%)
Query: 76 TYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALL 135
Y ++ IQ LEG+E VR RP+MYIG G RGLHHLVYE++DN++DEA AGY I V +
Sbjct: 9 NYSADSIQALEGMEHVRMRPSMYIGDVGVRGLHHLVYEVVDNSIDEALAGYCDTISVTIN 68
Query: 136 ADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSV 195
DNS++V DNGRGIP+D+H SALE V+T + AGGKF S Y VSGGLHGVG+S
Sbjct: 69 EDNSITVEDNGRGIPVDIHKKEGVSALEVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSC 126
Query: 196 VNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTT 255
VNALS+ L TV+R+G Y Q+YSRGK + + + D++GT + F PD +FT
Sbjct: 127 VNALSDLLRATVYREGKIYEQEYSRGKALFPVKV----IGETDKRGTSVTFKPDHTIFTQ 182
Query: 256 AIQFDHNTIAGRIRELAFLNPKLTIALR-----KEDSDPEKNQYNEYFFAG-GLEEYVQW 309
++F ++T+AGR+REL+FLN L I L +E+ +P+ +E FF+ GL+E++++
Sbjct: 183 TLEFSYDTLAGRLRELSFLNKGLKITLTDKRVIEENGEPK----HEVFFSKEGLKEFIKF 238
Query: 310 LNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 368
L+ + P+ DV+ D I +++AL + +D Y++ + Y N+I T +GGTH++G +
Sbjct: 239 LDGSRVPIIEDVISMELDKGEIPVEVALVY-NDTYAENIYSYVNNINTHEGGTHLQGFRM 297
Query: 369 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 428
LTRTL S + ++G+ REGLT I+SV+V P+FEGQTKT+LGN EV
Sbjct: 298 GLTRTLKKYADASGMLDKLKFEITGDDFREGLTAIVSVKVMEPQFEGQTKTKLGNREVVS 357
Query: 429 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 488
V Q+V E L YLE HP+ I+ K + A +A AAK+AR++V++K+V+ LPGKL
Sbjct: 358 PVSQAVAEMLENYLEEHPNDAKIIVQKVILAAQARHAAKKAREMVQRKTVMVGGGLPGKL 417
Query: 489 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
+DCS + E+F+VEGDSAGG+AKQGRDR FQ I+ PL+ I A
Sbjct: 418 SDCSEQDASKCEVFLVEGDSAGGTAKQGRDRNFQAIL-PLRGKILNVEKA 466
>gi|315639365|ref|ZP_07894527.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Campylobacter
upsaliensis JV21]
gi|315480691|gb|EFU71333.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Campylobacter
upsaliensis JV21]
Length = 770
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/466 (46%), Positives = 311/466 (66%), Gaps = 14/466 (3%)
Query: 73 VSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEV 132
+ + YG I+VL+GLEAVRKRP MYIG T GLHH++YE++DN++DEA AG+ I++
Sbjct: 1 MQENYGEGNIKVLKGLEAVRKRPGMYIGDTNINGLHHMIYEVVDNSIDEAMAGHCDTIDI 60
Query: 133 ALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVG 192
L + S V+DNGRGIP+ +HP N L VLTVLHAGGKF + Y VSGGLHGVG
Sbjct: 61 ELTTEGSCIVSDNGRGIPVGMHPTENMPTLTVVLTVLHAGGKFDQDT--YKVSGGLHGVG 118
Query: 193 LSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQV 252
+SVVNALS+ L TV R+G Y Q++++G+ + + + GT I F+PD+++
Sbjct: 119 VSVVNALSKKLVATVQREGKIYRQEFAKGQIASEFGI----IGESKKTGTSIEFFPDEEI 174
Query: 253 FTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNT 312
F +FD+ +A R RELA+LNPK+TI + D+ +N+ + F GG+ ++V LN
Sbjct: 175 FELT-EFDYEILAKRFRELAYLNPKITINFK--DNRVGRNE--SFHFEGGISQFVSDLNK 229
Query: 313 DKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 372
K+ L + F D D + +++AL + +D YS+ +L + N+I+T DGGTH G + LTR
Sbjct: 230 -KQALTKPIFFSVDEDNVNVEVALLY-NDTYSENLLSFVNNIKTPDGGTHETGFRMGLTR 287
Query: 373 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 432
+ + + + + ++KD ++GE VREGL I+SV+VP P+FEGQTK +LG+ VR +V++
Sbjct: 288 VITNYVEANASAREKDNKITGEDVREGLIAIVSVKVPEPQFEGQTKGKLGSSYVRPIVNK 347
Query: 433 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 492
+ EYL++Y E +P +I++K+L A + AAK+AR+L R+K L +LPGKLADC
Sbjct: 348 ASFEYLSKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQ 407
Query: 493 STTPEESEIFIVEGDSAGGSAKQGRDRRFQVIINPLQESIFAFASA 538
S P ESEI++VEGDSAGGSAKQGR+R FQ I+ PL+ I A
Sbjct: 408 SKDPSESEIYLVEGDSAGGSAKQGRERAFQAIL-PLRGKILNVEKA 452
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.133 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,081,888,371
Number of Sequences: 23463169
Number of extensions: 337554163
Number of successful extensions: 1058679
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 16584
Number of HSP's successfully gapped in prelim test: 1235
Number of HSP's that attempted gapping in prelim test: 965938
Number of HSP's gapped (non-prelim): 19561
length of query: 538
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 390
effective length of database: 8,886,646,355
effective search space: 3465792078450
effective search space used: 3465792078450
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 79 (35.0 bits)