Query 009297
Match_columns 538
No_of_seqs 312 out of 2334
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 23:19:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009297.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009297hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vte_A Tetrahydrocannabinolic 100.0 4.1E-88 1.4E-92 726.3 47.4 503 28-533 2-515 (518)
2 3fw9_A Reticuline oxidase; BI- 100.0 4.2E-85 1.4E-89 701.4 46.1 487 32-531 1-494 (495)
3 3tsh_A Pollen allergen PHL P 4 100.0 2.6E-80 9E-85 669.8 40.4 489 27-533 5-498 (500)
4 3rja_A Carbohydrate oxidase; p 100.0 8.1E-75 2.8E-79 620.5 41.2 455 32-532 2-473 (473)
5 3pop_A GILR oxidase; FAD bindi 100.0 7.4E-72 2.5E-76 600.2 40.2 450 47-530 8-501 (501)
6 2wdx_A Putative hexose oxidase 100.0 2.2E-68 7.6E-73 577.4 41.7 455 33-530 23-523 (523)
7 2ipi_A Aclacinomycin oxidoredu 100.0 1.1E-67 3.8E-72 572.1 42.9 457 31-531 19-520 (521)
8 1zr6_A Glucooligosaccharide ox 100.0 1.1E-67 3.6E-72 570.4 40.0 459 27-532 3-480 (503)
9 2y3s_A TAML; oxidoreductase; H 100.0 2.3E-67 7.8E-72 569.9 42.2 448 48-531 33-528 (530)
10 2bvf_A 6-hydroxy-D-nicotine ox 100.0 3.9E-65 1.3E-69 545.6 37.1 433 47-530 12-456 (459)
11 1w1o_A Cytokinin dehydrogenase 100.0 2.9E-40 1E-44 359.4 35.6 218 29-262 30-258 (534)
12 2exr_A Cytokinin dehydrogenase 100.0 9.6E-33 3.3E-37 298.9 35.5 197 71-271 53-260 (524)
13 4bby_A Alkyldihydroxyacetoneph 100.0 3.2E-33 1.1E-37 310.4 22.2 202 72-273 198-408 (658)
14 3pm9_A Putative oxidoreductase 100.0 6.1E-32 2.1E-36 288.7 20.8 204 71-275 43-253 (476)
15 2uuu_A Alkyldihydroxyacetoneph 100.0 3E-31 1E-35 289.6 20.9 198 76-273 134-338 (584)
16 4feh_A Oxidoreductase DPRE1; a 100.0 2.1E-30 7.2E-35 276.9 21.8 198 71-275 35-238 (481)
17 1wvf_A 4-cresol dehydrogenase 100.0 4.7E-30 1.6E-34 278.2 21.4 197 77-277 54-268 (520)
18 2i0k_A Oxidoreductase; MIX alp 100.0 9.1E-30 3.1E-34 277.5 17.0 196 48-253 9-225 (561)
19 3js8_A Cholesterol oxidase; ch 100.0 5.5E-29 1.9E-33 266.1 17.1 188 55-252 11-220 (540)
20 2vfr_A Xylitol oxidase, aldito 100.0 7.5E-29 2.6E-33 262.2 16.5 173 71-253 12-187 (422)
21 1e8g_A Vanillyl-alcohol oxidas 100.0 9.5E-28 3.2E-32 261.9 23.5 200 76-277 67-300 (560)
22 1f0x_A DLDH, D-lactate dehydro 99.9 3.6E-28 1.2E-32 263.6 13.6 197 76-274 42-297 (571)
23 3tx1_A UDP-N-acetylenolpyruvoy 99.9 4E-25 1.4E-29 223.7 11.8 163 77-251 52-217 (322)
24 3i99_A UDP-N-acetylenolpyruvoy 99.9 9.3E-25 3.2E-29 223.2 13.9 163 77-251 28-199 (357)
25 1uxy_A MURB, uridine diphospho 99.9 1.8E-23 6.3E-28 213.0 17.7 162 78-251 13-183 (340)
26 1hsk_A UDP-N-acetylenolpyruvoy 99.9 5.1E-24 1.7E-28 216.9 11.4 161 76-249 45-209 (326)
27 2gqt_A UDP-N-acetylenolpyruvyl 99.9 2.7E-22 9.1E-27 197.5 10.7 150 78-250 21-173 (268)
28 2yvs_A Glycolate oxidase subun 99.8 2.6E-19 8.9E-24 171.3 11.3 117 137-258 1-123 (219)
29 1ffv_C CUTM, flavoprotein of c 98.1 1.1E-05 3.7E-10 80.1 10.1 154 79-249 4-177 (287)
30 1n62_C Carbon monoxide dehydro 97.3 0.00041 1.4E-08 68.7 7.4 153 79-248 4-176 (288)
31 2w3s_A Xanthine dehydrogenase; 96.9 0.00076 2.6E-08 71.1 5.9 151 82-248 179-345 (462)
32 1t3q_C Quinoline 2-oxidoreduct 95.8 0.016 5.5E-07 57.2 7.2 152 78-247 3-174 (288)
33 3nvz_B Xanthine dehydrogenase/ 95.6 0.022 7.4E-07 56.7 7.7 152 79-247 9-189 (305)
34 3hrd_C Nicotinate dehydrogenas 90.3 0.28 9.5E-06 48.4 5.2 75 80-159 3-82 (296)
35 2vfr_A Xylitol oxidase, aldito 89.9 0.21 7.2E-06 51.8 4.2 23 502-525 392-414 (422)
36 1wvf_A 4-cresol dehydrogenase 83.6 1.1 3.9E-05 47.6 5.6 33 497-529 481-514 (520)
37 1rm6_B 4-hydroxybenzoyl-COA re 83.2 2.1 7.1E-05 42.6 7.0 76 79-160 5-84 (324)
38 4bby_A Alkyldihydroxyacetoneph 71.1 1.5 5E-05 48.2 2.0 29 496-524 625-654 (658)
39 3unc_A Xanthine dehydrogenase/ 64.2 5.9 0.0002 46.9 5.3 78 79-162 232-313 (1332)
40 3pm9_A Putative oxidoreductase 49.7 14 0.00047 38.7 4.6 29 496-524 443-472 (476)
41 1e8g_A Vanillyl-alcohol oxidas 49.7 22 0.00075 38.0 6.3 25 504-528 523-547 (560)
42 2i0k_A Oxidoreductase; MIX alp 45.1 8.5 0.00029 41.2 2.2 22 504-525 533-554 (561)
43 4feh_A Oxidoreductase DPRE1; a 41.4 9.2 0.00032 40.1 1.7 27 497-525 447-473 (481)
44 1xty_A PTH, peptidyl-tRNA hydr 38.5 54 0.0018 27.2 5.7 37 78-114 53-90 (120)
45 1f0x_A DLDH, D-lactate dehydro 38.4 16 0.00055 39.1 3.0 29 502-531 535-563 (571)
46 3js8_A Cholesterol oxidase; ch 30.0 21 0.00072 37.9 2.2 23 503-525 511-533 (540)
47 3zyv_A AOH1; oxidoreductase, m 30.0 35 0.0012 40.5 4.3 77 82-163 242-321 (1335)
48 1wn2_A Peptidyl-tRNA hydrolase 28.7 91 0.0031 25.8 5.5 37 78-114 54-91 (121)
49 2uuu_A Alkyldihydroxyacetoneph 26.0 25 0.00085 37.8 1.9 28 497-524 552-580 (584)
50 2zv3_A PTH, peptidyl-tRNA hydr 25.3 94 0.0032 25.5 5.0 38 77-114 47-85 (115)
51 1rlk_A Hypothetical protein TA 25.0 95 0.0033 25.5 5.0 37 78-114 50-87 (117)
52 1rzw_A Protein AF2095(GR4); be 24.2 1.1E+02 0.0037 25.5 5.1 37 78-114 47-84 (123)
53 1q7s_A BIT1, protein CGI-147; 22.8 1.3E+02 0.0045 24.6 5.4 36 78-113 50-86 (117)
54 4b4t_W RPN10, 26S proteasome r 21.9 64 0.0022 30.8 3.7 27 87-113 120-146 (268)
55 2lnd_A De novo designed protei 21.1 1E+02 0.0035 23.5 3.9 34 81-114 29-62 (112)
No 1
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=4.1e-88 Score=726.27 Aligned_cols=503 Identities=47% Similarity=0.881 Sum_probs=422.9
Q ss_pred CCcchHHhhhccCCCCCCCCcceEeCCCCCCcHHHHHhhhhccccCCCCCCCccEEEEcCCHHHHHHHHHHHHhCCCcEE
Q 009297 28 NSHESFHQCLLNNSPPSHPIFQAIHTPQNSSYSSVLQSYIRNLRFNTSSTPKPVLIVAAMHESHVQAAIICAKKHNLQMK 107 (538)
Q Consensus 28 ~~~~~~~~cl~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~ 107 (538)
+++++|.+||+.....+.++++.|++|+|+.|++++.++++|.||+.....+|.+|++|+|++||+++|++|+++++|+.
T Consensus 2 ~~~~~f~~c~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~ 81 (518)
T 3vte_A 2 NPRENFLKCFSKHIPNNVANPKLVYTQHDQLYMSILNSTIQNLRFISDTTPKPLVIVTPSNNSHIQATILCSKKVGLQIR 81 (518)
T ss_dssp CHHHHHHHHHHHHCCC----CCCEECTTSTTHHHHHHHTCCBGGGCSSSSCCCSEEECCCSHHHHHHHHHHHHHHTCEEE
T ss_pred ChhHHHHHHHHhcCCccCCCCceEECCCCcchHHHHhhhhcccccccccCCCCCEEEEeCCHHHHHHHHHHHHHcCCcEE
Confidence 56788999999877667788999999999999999888899999999889999999999999999999999999999999
Q ss_pred EEecCcCCCCCccccCCCeEEEEecCcccEEEcCCCCeEEEeCCccHHHHHHHHHHhCCccccCCCCCCccccccccccC
Q 009297 108 IRSGGHDYEGLSYVSNVPFFILDMFNLRSIDVDIESETAWVQAGAILGEVFYRIAEKSKTHGFPAGVCPTVGVGGHFSAG 187 (538)
Q Consensus 108 ~~ggGh~~~g~s~~~~~~g~vIdl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~G~~~~vgigG~~~gG 187 (538)
+||||||+.|.+.....+|++|||++||+|++|+++++++||+|+++.+|+++|.++|+++.+++|.|+++||||+++||
T Consensus 82 vrggGh~~~g~~~~~~~~gvvIdl~~l~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgvgG~~~gG 161 (518)
T 3vte_A 82 TRSGGHDAEGMSYISQVPFVVVDLRNMHSIKIDVHSQTAWVEAGATLGEVYYWINEKNENLSFPGGYCPTVGVGGHFSGG 161 (518)
T ss_dssp EESSCCCTTCTTTCCSSSEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCTTEECCCCSCTTCBHHHHHHTC
T ss_pred EECCCcCCCCCccCCCCCeEEEECCCCceeEEeCCCCEEEEeCCccHHHHHHHHHHhCCCceecCCCCCCeeeeeeeCCC
Confidence 99999999988643445689999999999999999999999999999999999999876788999999999999999999
Q ss_pred CcCCCccccCccccceeEEEEEecCCeEEeccCCCchhhhhhhhcc-CccEEEEEEEEEEeecCceEEEEEEecChh-hH
Q 009297 188 GYGNMMRKYGLSVDNIVDAKLVDVNGRILDRNSMGEDLFWAIRGGG-ASFGVVLAYKINLVPVPETVTVFKVEKTLE-QD 265 (538)
Q Consensus 188 g~g~~~~~~G~~~D~v~~~~vV~a~G~~~~~~~~~~dLf~a~rG~~-g~~Givt~~~~~~~p~~~~~~~~~~~~~~~-~~ 265 (538)
|+|+++++||+++|+|+++|||++||++++.+.+++|||||+|||+ |+|||||+++||++|.|+.+..|.+.+..+ +.
T Consensus 162 g~G~~s~~~G~~~D~V~~~evV~adG~iv~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~~~ 241 (518)
T 3vte_A 162 GYGALMRNYGLAADNIIDAHLVNVDGKVLDRKSMGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIHG 241 (518)
T ss_dssp CCCTTHHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEEECCCHHH
T ss_pred CCccccCCCCchhheEEEEEEEccCCeEEEeeccccchhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEEecCCHHH
Confidence 9999999999999999999999999999965556899999999984 999999999999999998777777776543 55
Q ss_pred HHHHHHHHHHhhhcCCCCceEEEEEEecCCCC--CCCcceEEEEEEEEeeCCHHHHHHhhhhcCCCCCCCcccccccchH
Q 009297 266 ATDAVDKWQHVAHKLDDGLFIRLVLDVVNSST--RTGERTVRATFIALFLGGSERLLSITDKGFPELGLTRSDCTELSWI 343 (538)
Q Consensus 266 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~~~~~~~~~~~~ 343 (538)
+.+++.+|++++..+|+++++.+.+...++.+ ..+...+.+.+.++|+|+.+++.+.+.+.|++++....++.+++|.
T Consensus 242 ~~~~l~~~~~~~~~~p~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~w~ 321 (518)
T 3vte_A 242 LVKLFNKWQNIAYKYDKDLVLMTHFITKNITDNHGKNKTTVHGYFSSIFHGGVDSLVDLMNKSFPELGIKKTDCKEFSWI 321 (518)
T ss_dssp HHHHHHHHHHHGGGSCTTEEEEEEEEEESCC-------CEEEEEEEEEEESCHHHHHHHHHHHCGGGCCCGGGEEEECHH
T ss_pred HHHHHHHHHHHHHcCCHhHeEEEEEcccCCCCCCCcCCCceEEEEEEEEeCCHHHHhhhhhhhhhhcCCCccceeecchh
Confidence 68899999999999999999988876533210 0111234577889999999999988888777777665677889999
Q ss_pred HHHhhhcCCCCC-CC---cccccCCCcccccccccccccccCCCCHhHHHHHHHHHHhc--CCceEEEeeCCCccCCCCC
Q 009297 344 DSVVYWGSFPAG-TP---ASVLLDRTPLTLSSLKRKSDYVTEPIPREGLEGLWKKMIEL--ERPYMNFNPYGGKMHEIPA 417 (538)
Q Consensus 344 ~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~~~~~~~~~--~~~~i~~~~~GGav~~v~~ 417 (538)
+++.++..++.+ .+ ++.+.++...+..+||.||.|+.++++++.|+.+++.+.+. +.+.+.+.++||++++++.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~v~~~~~GGa~~~v~~ 401 (518)
T 3vte_A 322 DTTIFYSGVVNFNTANFKKEILLDRSAGKKTAFSIKLDYVKKPIPETAMVKILEKLYEEDVGAGMYVLYPYGGIMEEISE 401 (518)
T ss_dssp HHHHHTSSSCCC-----CGGGGGCTTCSCCBEEEEEEEEESSCCCHHHHHHHHHGGGGSCTTTEEEEEEECCGGGGTSCT
T ss_pred hhhhhhhcCCccCCccchhhhhccCCcCcccceeeechhcccCCCHHHHHHHHHHHHhCCCCCeEEEEeecCccccCCCC
Confidence 988777655433 22 34444543334456788999999899999999999988763 3577899999999999999
Q ss_pred CCCCCcCcCCCeeEEEEEeEeCCCChhhhhHHHHHHHHHHHhhcCcccCCCCccccccCCcccC-CCCCCCcCCcccccc
Q 009297 418 TASPFPHRDGNLWKIQYVTNWNEEGVDAANYYIDLTRQLYDYLTPFVSKNPRQSFLAYRDLDLG-TNNHKFETGYSEGRA 496 (538)
Q Consensus 418 ~atAf~~Rd~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~Y~Nyad~~~~-~~~~~~~~~~~~~~~ 496 (538)
++|||+||++.+|.+++.+.|.+++. +++..+|++++++.+.|+.+..++++|+||.|.+++ .+..++ .+|..+..
T Consensus 402 ~~TAf~hR~~~~~~~~~~~~w~~~~~--~~~~~~w~~~~~~~~~p~~~~~~~g~YvNy~D~dl~~~~~~~~-~~~~~~~~ 478 (518)
T 3vte_A 402 SAIPFPHRAGIMYELWYTASWEKQED--NEKHINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLGKTNHASP-NNYTQARI 478 (518)
T ss_dssp TSSSCCCCTTCCEEEEEEEEECCTTT--HHHHHHHHHHHHHHTGGGSCCTTCCCCTTSCCGGGCCCCTTSC-CCHHHHHH
T ss_pred CCCcccccCcceEEEEEEEecCCcch--hHHHHHHHHHHHHHhccccCCCCccccccCCCccccccccccc-cchhhhhh
Confidence 99999999855899999999987653 478899999999999998765567999999998875 211111 22334457
Q ss_pred hhhhhccccHHHHHHhhcccCCCCCCCCCCCCCCCCC
Q 009297 497 YGINYFLENFDRLVEIKTKVDPDNFFRNEQSIPVLPP 533 (538)
Q Consensus 497 ~~~~yyg~n~~RL~~IK~kYDP~~vF~~~q~I~~~~~ 533 (538)
|++.|||+||+||++||+||||+|||+++|||+|.+.
T Consensus 479 w~~~Yyg~N~~RL~~vK~~yDP~n~F~~~QsI~p~~~ 515 (518)
T 3vte_A 479 WGEKYFGKNFNRLVKVKTKVDPNNFFRNEQSIPPLPP 515 (518)
T ss_dssp HHHHHSSTHHHHHHHHHHHHCTTCCSCCTTCCCCCCT
T ss_pred HHHHHhHhHHHHHHHHHhhcCchhcccCCCCCCCCCC
Confidence 9999999999999999999999999999999998865
No 2
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=4.2e-85 Score=701.43 Aligned_cols=487 Identities=40% Similarity=0.756 Sum_probs=412.3
Q ss_pred hHHhhhccCCCCCCCCcceEeCCCCCCcHHHHHhhhhccccCCCCCCCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEec
Q 009297 32 SFHQCLLNNSPPSHPIFQAIHTPQNSSYSSVLQSYIRNLRFNTSSTPKPVLIVAAMHESHVQAAIICAKKHNLQMKIRSG 111 (538)
Q Consensus 32 ~~~~cl~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~gg 111 (538)
+|.+||++...++ ++.|++|+|++|++++.++++|.||+....++|.+|++|+|++||+++|++|+++++|+.+|||
T Consensus 1 ~~~~cl~~~~~~~---~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrGg 77 (495)
T 3fw9_A 1 DLLSCLTFNGVRN---HTVFSADSDSDFNRFLHLSIQNPLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRSG 77 (495)
T ss_dssp CHHHHHHHTTCCC---EEECCCCTTCHHHHHHHHTCCCGGGCSTTSCCCSEEECCCSHHHHHHHHHHHHTSSCEEEEESS
T ss_pred ChhHHHhhcCCCC---CCeEECCCCCchHHHHhhhhhhcccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEECC
Confidence 4789999865443 6899999999999998788999999999999999999999999999999999999999999999
Q ss_pred CcCCCCCccccCCCeEEEEecCcccEEEcCCCCeEEEeCCccHHHHHHHHHHhCCccccCCCCCCccccccccccCCcCC
Q 009297 112 GHDYEGLSYVSNVPFFILDMFNLRSIDVDIESETAWVQAGAILGEVFYRIAEKSKTHGFPAGVCPTVGVGGHFSAGGYGN 191 (538)
Q Consensus 112 Gh~~~g~s~~~~~~g~vIdl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~G~~~~vgigG~~~gGg~g~ 191 (538)
|||+.|.+...+.+|++|||++||+|++|+++++++||+|+++.+|+++|.+++.++.+|+|.|+++||||+++|||+|+
T Consensus 78 Gh~~~g~~~~~~~ggvvIdl~~m~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgigG~~~gGg~G~ 157 (495)
T 3fw9_A 78 GHSYEGLSYTSDTPFILIDLMNLNRVSIDLESETAWVESGSTLGELYYAITESSSKLGFTAGWCPTVGTGGHISGGGFGM 157 (495)
T ss_dssp CCCTTCTTSCCSSCEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCSSEECCCCSCTTCBHHHHHHTCCCCT
T ss_pred CcCCCCccccCCCCeEEEECCCCCcEEEeCCCCEEEEcCCCCHHHHHHHHHHhcCCceeccCCCCCCeEeeeccCCCCcc
Confidence 99999887554456899999999999999999999999999999999999999555889999999999999999999999
Q ss_pred CccccCccccceeEEEEEecCCeEEeccCCCchhhhhhhhcc-CccEEEEEEEEEEeecCceEEEEEEecChh-hHHHHH
Q 009297 192 MMRKYGLSVDNIVDAKLVDVNGRILDRNSMGEDLFWAIRGGG-ASFGVVLAYKINLVPVPETVTVFKVEKTLE-QDATDA 269 (538)
Q Consensus 192 ~~~~~G~~~D~v~~~~vV~a~G~~~~~~~~~~dLf~a~rG~~-g~~Givt~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~ 269 (538)
++++||+.+|+|++++||++||++++++.+++|||||+|||+ |+|||||+++||++|.|+.+..+.+.++.+ +.+.++
T Consensus 158 ~~~~~G~~~D~v~~~~vV~adG~i~~~~~~~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a~~~ 237 (495)
T 3fw9_A 158 MSRKYGLAADNVVDAILIDANGAILDRQAMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATSL 237 (495)
T ss_dssp THHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHHHHH
T ss_pred cccCCCchhheEEEEEEEcCCCCEEEcCCCChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHHHHH
Confidence 999999999999999999999999975556899999999955 999999999999999998777777766543 557789
Q ss_pred HHHHHHhhhcCCCCceEEEEEEecCCCCCCCcceEEEEEEEEeeCCHHHHHHhhhhcCCCCCCCcccccccchHHHHhhh
Q 009297 270 VDKWQHVAHKLDDGLFIRLVLDVVNSSTRTGERTVRATFIALFLGGSERLLSITDKGFPELGLTRSDCTELSWIDSVVYW 349 (538)
Q Consensus 270 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~ 349 (538)
+.+|++++..+|+++++.+... +. .....+.+.++|+|+.+++.+.+.+.|++++....++.+++|.+++.++
T Consensus 238 l~~~~~~~~~~~~~l~~~~~~~--~~-----~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~~~~~~~~~ 310 (495)
T 3fw9_A 238 LHKWQFVAEELEEDFTLSVLGG--AD-----EKQVWLTMLGFHFGLKTVAKSTFDLLFPELGLVEEDYLEMSWGESFAYL 310 (495)
T ss_dssp HHHHHHHHHHSCTTEEEEEEEE--EE-----TTEEEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHHH
T ss_pred HHHHHHHHhcCChhHeEEEEEc--CC-----CCceEEEEEEEEeCCHHHHHHHHHHhhhhcCCCccceEEcCHHHHHHHH
Confidence 9999999999999999877643 11 1234577789999999999888887778777666678899999977776
Q ss_pred cCCCCCCCcccccCCCcc-cccccccccccccCCCCHhHHHHHHHHHHhcCCceEEEeeCCCccCCCCCCCCCCcCcCCC
Q 009297 350 GSFPAGTPASVLLDRTPL-TLSSLKRKSDYVTEPIPREGLEGLWKKMIELERPYMNFNPYGGKMHEIPATASPFPHRDGN 428 (538)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~l~~~~i~~~~~~~~~~~~~~i~~~~~GGav~~v~~~atAf~~Rd~~ 428 (538)
.+++. ++.+.++... ++.+||.||.|+.++++++.++.+++.+.+.+...+.++++||++++++.++|||+||++.
T Consensus 311 ~~~~~---~~~l~~~~~~~~~~~~~~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~~~~~GGa~~~v~~~~TAf~hR~~~ 387 (495)
T 3fw9_A 311 AGLET---VSQLNNRFLKFDERAFKTKVDLTKEPLPSKAFYGLLERLSKEPNGFIALNGFGGQMSKISSDFTPFPHRSGT 387 (495)
T ss_dssp TTCSC---GGGGGCTTSCSCCCEEEEEEEECSSCCCHHHHHHHHHHHHHCTTEEEEEEECCGGGGTSCTTTSSCCCCTTC
T ss_pred hcccc---hhhhcCCCCCccCcceeEeehhhcCCCCHHHHHHHHHHHhhCCCcEEEecccCCccccCCCCCCCccccCcc
Confidence 54331 2233343222 3457889999999999999999999998876667789999999999999999999999866
Q ss_pred eeEEEEEeEeCCCChhhhhHHHHHHHHHHHhhcCcccCCCCccccccCCcccCCCCCC----CcCCcccccchhhhhccc
Q 009297 429 LWKIQYVTNWNEEGVDAANYYIDLTRQLYDYLTPFVSKNPRQSFLAYRDLDLGTNNHK----FETGYSEGRAYGINYFLE 504 (538)
Q Consensus 429 ~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~Y~Nyad~~~~~~~~~----~~~~~~~~~~~~~~yyg~ 504 (538)
+|.+++.+.|.++.++.+++..+|++++++.+.|+.+..++++|+||.|.+++.++.. ...+|..+..|++.|||+
T Consensus 388 ~~~~~~~~~w~~~~~~~~~~~~~w~~~~~~~~~p~~~~~~~~~Y~Ny~d~dl~~~~~~~~~~~~~~~~~~~~w~~~Yyg~ 467 (495)
T 3fw9_A 388 RLMVEYIVAWNQSEQKKKTEFLDWLEKVYEFMKPFVSKNPRLGYVNHIDLDLGGIDWGNKTVVNNAIEISRSWGESYFLS 467 (495)
T ss_dssp CEEEEEEEEECGGGGGGHHHHHHHHHHHHHHHGGGSCCSSCCCCGGGCCGGGCCCCTTCHHHHHTHHHHHHHHHHHHHGG
T ss_pred ceEEEEEEecCCCCcchhHHHHHHHHHHHHHHhhhccCCCcccccCccCccccccccccccccccccchhhhhHHHHhHh
Confidence 8999999999765333457889999999999999975456789999999887521100 001222344699999999
Q ss_pred cHHHHHHhhcccCCCCCCCCCCCCCCC
Q 009297 505 NFDRLVEIKTKVDPDNFFRNEQSIPVL 531 (538)
Q Consensus 505 n~~RL~~IK~kYDP~~vF~~~q~I~~~ 531 (538)
||+||++||+||||+|||+++|||+|.
T Consensus 468 n~~RL~~vK~~yDP~n~F~~~qsI~p~ 494 (495)
T 3fw9_A 468 NYERLIRAKTLIDPNNVFNHPQSIPPM 494 (495)
T ss_dssp GHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred HHHHHHHHHHhhCcHhhCCCCCCCCCC
Confidence 999999999999999999999999985
No 3
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=2.6e-80 Score=669.83 Aligned_cols=489 Identities=43% Similarity=0.826 Sum_probs=397.2
Q ss_pred CCCcchHHhhhccCCCCCCCCcceEeCCCCCCcHHHHHhhhhccccCCCCCCCccEEEEcCCHHHHHHHHHHHHhCCCcE
Q 009297 27 VNSHESFHQCLLNNSPPSHPIFQAIHTPQNSSYSSVLQSYIRNLRFNTSSTPKPVLIVAAMHESHVQAAIICAKKHNLQM 106 (538)
Q Consensus 27 ~~~~~~~~~cl~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~ 106 (538)
++..++|.+||.+... .+.|++|+++.|++.+.++.+|.||+....++|.+||+|+|++||+++|++|+++++||
T Consensus 5 ~~~~~~f~~~L~~~~~-----~~~v~~~~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~~~ 79 (500)
T 3tsh_A 5 PAAKEDFLGCLVKEIP-----PRLLYAKSSPAYPSVLGQTIRNSRWSSPDNVKPLYIITPTQVSHIQSAVVCGRRHSVRI 79 (500)
T ss_dssp ----CHHHHHHHHHSC-----GGGEEETTSTTHHHHHHTTCCCTTTTSTTSCCCSEEECCSSHHHHHHHHHHHHHTTCEE
T ss_pred cccHHHHHHHHHhhCC-----CCEEECCCCCccHHHHHhhhccccccCCCCCCceEEEEcCCHHHHHHHHHHHHHCCCcE
Confidence 3457889999998653 35788999999999999899999999999999999999999999999999999999999
Q ss_pred EEEecCcCCCCCcccc--CCCeEEEEecCcccEEEcCCCCeEEEeCCccHHHHHHHHHHhCCccccCCCCCCcccccccc
Q 009297 107 KIRSGGHDYEGLSYVS--NVPFFILDMFNLRSIDVDIESETAWVQAGAILGEVFYRIAEKSKTHGFPAGVCPTVGVGGHF 184 (538)
Q Consensus 107 ~~~ggGh~~~g~s~~~--~~~g~vIdl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~G~~~~vgigG~~ 184 (538)
++|||||++.|.|... ..+|++|||++||+|++|+++++++||+|++|+||+++|.++|..+.+++|.|++||+||++
T Consensus 80 ~~r~gGh~~~g~s~~~~~~~~~~~idl~~~~~v~~d~~~~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~~ 159 (500)
T 3tsh_A 80 RVRSGGHDYEGLSYRSLQPETFAVVDLNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGNF 159 (500)
T ss_dssp EEESSCCCTTCTTTCCSSSCCEEEEECTTCCCEEEETTTTEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHHH
T ss_pred EEEcCCcCCCCCcCCCCCcCCeEEEECcCCCCEEECCCCCEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCcc
Confidence 9999999999876432 24689999999999999999999999999999999999999998888899999999999999
Q ss_pred ccCCcCCCccccCccccceeEEEEEecCCeEEeccCCCchhhhhhhhcc-CccEEEEEEEEEEeecCceEEEEEEecChh
Q 009297 185 SAGGYGNMMRKYGLSVDNIVDAKLVDVNGRILDRNSMGEDLFWAIRGGG-ASFGVVLAYKINLVPVPETVTVFKVEKTLE 263 (538)
Q Consensus 185 ~gGg~g~~~~~~G~~~D~v~~~~vV~a~G~~~~~~~~~~dLf~a~rG~~-g~~Givt~~~~~~~p~~~~~~~~~~~~~~~ 263 (538)
+|||+|+++++||+++|||+++|||++||++++++.+++|||||+|||+ |+|||||+++||++|.|+.+..+...+...
T Consensus 160 ~~gg~g~~~~~~G~~~d~v~~~~vV~a~G~i~~~~~~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~~ 239 (500)
T 3tsh_A 160 AGGGFGMLLRKYGIAAENVIDVKLVDANGKLHDKKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVS 239 (500)
T ss_dssp HTCCCCTTHHHHCCGGGGEEEEEEECTTSCEECHHHHCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEETT
T ss_pred ccccCCccccccCChhhheeeEEEECCCceEEECCCCChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecCcH
Confidence 9999999999999999999999999999999976677899999999877 899999999999999999877777666655
Q ss_pred hHHHHHHHHHHHhhhcCCCCceEEEEEEecCCCCCCCcceEEEEEEEEeeCCHHHHHHhhhhcCCCCCCCcccccccchH
Q 009297 264 QDATDAVDKWQHVAHKLDDGLFIRLVLDVVNSSTRTGERTVRATFIALFLGGSERLLSITDKGFPELGLTRSDCTELSWI 343 (538)
Q Consensus 264 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~~~~~~~~~~~~ 343 (538)
+.+.+++++|+.+.+.+|+++...+... . . ...+..+|.|+.+++...+.+.++.++.....+..++|.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~------~---~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 308 (500)
T 3tsh_A 240 EGAVDIINKWQVVAPQLPADLMIRIIAQ--G------P---KATFEAMYLGTCKTLTPLMSSKFPELGMNPSHCNEMSWI 308 (500)
T ss_dssp TTHHHHHHHHHHHGGGSCTTEEEEEEES--S------S---EEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHH
T ss_pred HHHHHHHHHHHHhhhccChhhEEEEEec--C------C---CcEEEEEEecchhhhhhhhhhcchhccCCccccchhhhh
Confidence 6677899999999999999988766532 1 1 245667899999888877777677766555555667777
Q ss_pred HHHhhhcCCCCCCCcccccCCCcccccccccccccccCCCCHhHHHHHHHHHHhcC-CceEEEeeCCCccCCCCCCCCCC
Q 009297 344 DSVVYWGSFPAGTPASVLLDRTPLTLSSLKRKSDYVTEPIPREGLEGLWKKMIELE-RPYMNFNPYGGKMHEIPATASPF 422 (538)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~~~~~~~~~~-~~~i~~~~~GGav~~v~~~atAf 422 (538)
+...+..........+...++........+.++.++.++++++.++.+++.+...+ ...+.++++||++.+++.++|+|
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gga~~~~~~~ata~ 388 (500)
T 3tsh_A 309 QSIPFVHLGHRDALEDDLLNRQNSFKPFAEYKSDYVYQPFPKTVWEQILNTWLVKPGAGIMIFDPYGATISATPESATPF 388 (500)
T ss_dssp HHHHHHHHCCSSCHHHHHHCCCCCCCCEEEEEEEEECSCCCHHHHHHHHHTGGGSTTCCEEEEEECCHHHHHSCTTSSSC
T ss_pred ccchhhhhccccccccccccccccccchhhhhhhhhcccCcHHHHHHHHHHhhcCCCceEEEEcccCccccCCCCccCcC
Confidence 65433321111111111122221222334556677777889888888877665544 46677899999999999999999
Q ss_pred cCcCCCeeEEEEEeEeCCCChhhhhHHHHHHHHHHHhhcCcccCCCCccccccCCcccCCCCC-CCcCCcccccchhhhh
Q 009297 423 PHRDGNLWKIQYVTNWNEEGVDAANYYIDLTRQLYDYLTPFVSKNPRQSFLAYRDLDLGTNNH-KFETGYSEGRAYGINY 501 (538)
Q Consensus 423 ~~Rd~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~Y~Nyad~~~~~~~~-~~~~~~~~~~~~~~~y 501 (538)
+||++.++++++...|.+++++ ++..+|++++++.+.++.+..+.++|+||+|.+++..+. .....|...+.|++.|
T Consensus 389 ~~R~~~l~~i~~~~~w~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~aY~Ny~D~dlg~~~~~~~~~~~~~~~~w~~~Y 466 (500)
T 3tsh_A 389 PHRKGVLFNIQYVNYWFAPGAA--AAPLSWSKDIYNYMEPYVSKNPRQAYANYRDIDLGRNEVVNDVSTYASGKVWGQKY 466 (500)
T ss_dssp CCCTTCCEEEEEEEEECSTTCC--HHHHHHHHHHHHHHGGGSCCSSCCCCTTSCCGGGCCCCEETTEECHHHHHHHHHHH
T ss_pred cccCCcEEEEEEEEecCCcchh--HHHHHHHHHHHHHHHHHhcCCCCeEEeccccccccccccccccccccccchHHHHh
Confidence 9999777889999999988755 778899999999999987656678999999998763210 0001122345799999
Q ss_pred ccccHHHHHHhhcccCCCCCCCCCCCCCCCCC
Q 009297 502 FLENFDRLVEIKTKVDPDNFFRNEQSIPVLPP 533 (538)
Q Consensus 502 yg~n~~RL~~IK~kYDP~~vF~~~q~I~~~~~ 533 (538)
||+||+||++||+||||+|+|+++|||||...
T Consensus 467 ~g~Ny~RL~~IK~kyDP~nvF~~~qsI~Pl~~ 498 (500)
T 3tsh_A 467 FKGNFERLAITKGKVDPTDYFRNEQSIPPLIK 498 (500)
T ss_dssp HGGGHHHHHHHHHHHCTTCCSCCTTSCCCCCC
T ss_pred hhHHHHHHHHHHHHhCcccccCCCCCCCCCCC
Confidence 99999999999999999999999999999754
No 4
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=8.1e-75 Score=620.53 Aligned_cols=455 Identities=24% Similarity=0.444 Sum_probs=368.3
Q ss_pred hHHhhhccCCCCCCCCcceEeCCCCCCcHHHHHhhhhccccCCCCCCCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEec
Q 009297 32 SFHQCLLNNSPPSHPIFQAIHTPQNSSYSSVLQSYIRNLRFNTSSTPKPVLIVAAMHESHVQAAIICAKKHNLQMKIRSG 111 (538)
Q Consensus 32 ~~~~cl~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~gg 111 (538)
+|.+||++.. ..|++|+|+.|++.+. +||......|.+|++|+|++||+++|++|+++++|+.+|||
T Consensus 2 ~l~~cl~~~~-------~~v~~p~~~~y~~~~~------~~n~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~gg 68 (473)
T 3rja_A 2 AIEACLSAAG-------VPIDIPGTADYERDVE------PFNIRLPYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAKSG 68 (473)
T ss_dssp HHHHHHHHTT-------CCBCCTTSHHHHHHTC------CSBTTSCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESS
T ss_pred hHHHHHHhCC-------CcEECCCCCchHHHHH------HhhcccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEcC
Confidence 5889999953 4588999999998743 56666668999999999999999999999999999999999
Q ss_pred CcCCCCCccccCCCeEEEEecCcccEE-EcCCCCeEEEeCCccHHHHHHHHHHhCCccccCCCCCCccccccccccCCcC
Q 009297 112 GHDYEGLSYVSNVPFFILDMFNLRSID-VDIESETAWVQAGAILGEVFYRIAEKSKTHGFPAGVCPTVGVGGHFSAGGYG 190 (538)
Q Consensus 112 Gh~~~g~s~~~~~~g~vIdl~~l~~i~-~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~G~~~~vgigG~~~gGg~g 190 (538)
|||+.+.+.....++++|||++||+|. +|+++++++||+|+++.+|+++|.++|. +.+|.|.|+++||||+++|||+|
T Consensus 69 Gh~~~g~~~~~~~~~vvIdl~~~~~i~~vd~~~~~v~v~aG~~~~~l~~~l~~~G~-~~~p~G~~~~vgvgG~~~ggg~G 147 (473)
T 3rja_A 69 GHSYASFGFGGENGHLMVQLDRMIDVISYNDKTGIAHVEPGARLGHLATVLNDKYG-RAISHGTCPGVGISGHFAHGGFG 147 (473)
T ss_dssp CCCTTCGGGTSSSSCEEEECTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHHHS-EECCCCSCTTCBHHHHHHTCCCC
T ss_pred CCCCCCCcccCCCCeEEEECCCCCceEEEcCCCCEEEECCCCCHHHHHHHHHHcCC-EEeccCCCCCcEeeeeccCCCCC
Confidence 999987653334567999999999997 9999999999999999999999999983 67889999999999999999999
Q ss_pred CCccccCccccceeEEEEEecCCeEEe-ccCCCchhhhhhhhccCccEEEEEEEEEEeecCceEEEEEEecChh--hHHH
Q 009297 191 NMMRKYGLSVDNIVDAKLVDVNGRILD-RNSMGEDLFWAIRGGGASFGVVLAYKINLVPVPETVTVFKVEKTLE--QDAT 267 (538)
Q Consensus 191 ~~~~~~G~~~D~v~~~~vV~a~G~~~~-~~~~~~dLf~a~rG~~g~~Givt~~~~~~~p~~~~~~~~~~~~~~~--~~~~ 267 (538)
+.+++||+++|+|+++|||++||++++ +..+++||||++||++|+|||||+++||++|.|+.+..+.+.+.+. +.+.
T Consensus 148 ~~~~~~G~~~D~v~~~~vV~a~G~v~~~~~~~~~dLf~a~rG~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~ 227 (473)
T 3rja_A 148 FSSHMHGLAVDSVVGVTVVLADGRIVEASATENADLFWGIKGAGSNFGIVAVWKLATFPAPKVLTRFGVTLNWKNKTSAL 227 (473)
T ss_dssp TTHHHHCCGGGGEEEEEEECTTSCEEEEETTBSHHHHHHHHHHGGGTCEEEEEEEECEECCSCEEEEEEECCCCSHHHHH
T ss_pred cccccccchHhheeeEEEEecCCeEEEeCCCCCcchhhcccCCCCceEEEEEEEEEEEeCCCceEEEEEEecCccHHHHH
Confidence 999999999999999999999999994 4557899999999999999999999999999998777777766653 3467
Q ss_pred HHHHHHHHhhh-cCCCCceEEEEEEecCCCCCCCcceEEEEEEEEeeCCHHHHHHhhhhcCCCCC-CCccccc-ccchHH
Q 009297 268 DAVDKWQHVAH-KLDDGLFIRLVLDVVNSSTRTGERTVRATFIALFLGGSERLLSITDKGFPELG-LTRSDCT-ELSWID 344 (538)
Q Consensus 268 ~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~-~~~~~~~-~~~~~~ 344 (538)
+++++|+++.. ++|++++..+.+. ++ . . +.+.++|+|+.+++.+++.+++...+ +...++. +++|.+
T Consensus 228 ~~~~~~~~~~~~~~p~~l~~~~~~~--~~-----~-~--~~~~~~~~G~~~~~~~~l~pl~~~~p~~~~~~~~~~~~~~~ 297 (473)
T 3rja_A 228 KGIEAVEDYARWVAPREVNFRIGDY--GA-----G-N--PGIEGLYYGTPEQWRAAFQPLLDTLPAGYVVNPTTSLNWIE 297 (473)
T ss_dssp HHHHHHHHHHHHTCCTTEEEEEEES--SS-----S-C--CEEEEEEESCHHHHHHHHHHHHTTSCTTCEECCCEEECHHH
T ss_pred HHHHHHHHHhhhCCChhHEEEEEEc--CC-----C-c--EEEEEEecCCHHHHHHHHHHHHHhCCCCcceeeecccCHHH
Confidence 89999999988 8999999877754 21 1 1 56678999999999888776433332 2345567 899999
Q ss_pred HHhhhcCCCCCCCcccccCCCcccccccccccccccCCCCHhHHHHHHHHHHhc-C-----CceEEEeeCCC---ccCCC
Q 009297 345 SVVYWGSFPAGTPASVLLDRTPLTLSSLKRKSDYVTEPIPREGLEGLWKKMIEL-E-----RPYMNFNPYGG---KMHEI 415 (538)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~~~~~~~~~-~-----~~~i~~~~~GG---av~~v 415 (538)
.+.++.... ..+.... .....++.||.+. +++++++++.+++.+.+. + .+.++++++|| +++++
T Consensus 298 ~~~~~~~~~---~~~~~~~---~~~~~~~~ks~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~ai~~v 370 (473)
T 3rja_A 298 SVLSYSNFD---HVDFITP---QPVENFYAKSLTL-KSIKGDAVKNFVDYYFDVSNKVKDRFWFYQLDVHGGKNSQVTKV 370 (473)
T ss_dssp HHHHTSSSS---CCCCSSC---CCCBEEEEEEEEE-SCCTTHHHHHHHHHHHHTGGGCCSSEEEEEEEECCSTTCGGGGS
T ss_pred HHHhhhcCC---CcccccC---CCCCcceEecccc-CCCCHHHHHHHHHHHHhcCCCCCCcceEEEEEecCCcchhhcCC
Confidence 766654321 1111110 0133567788775 469999999999988653 1 12467899998 67889
Q ss_pred CCCCCCCcCcCCCeeEEEEEeEeCC-CChhhhhHHHHHHHHHHHhhcCcccCCCCccccccCCcccCCCCCCCcCCcccc
Q 009297 416 PATASPFPHRDGNLWKIQYVTNWNE-EGVDAANYYIDLTRQLYDYLTPFVSKNPRQSFLAYRDLDLGTNNHKFETGYSEG 494 (538)
Q Consensus 416 ~~~atAf~~Rd~~~~~~~~~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~Y~Nyad~~~~~~~~~~~~~~~~~ 494 (538)
+.++|||+||+ ..|.+++...|.+ +..+ ++..+|++++++.+.+.....+.++|+||+|.+++ .
T Consensus 371 ~~~~TAf~hR~-~~~~~~~~~~w~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~YvNy~d~~~~------------~ 435 (473)
T 3rja_A 371 TNAETAYPHRD-KLWLIQFYDRYDNNQTYP--ETSFKFLDGWVNSVTKALPKSDWGMYINYADPRMD------------R 435 (473)
T ss_dssp CTTTSSCCCTT-CSEEEEEEEEECTTSCCC--TTTHHHHHHHHHHHHTTSCGGGEECCGGGCCCSSC------------H
T ss_pred CCCCCccccCC-ccEEEEEEEEeCCCCccc--hHHHHHHHHHHHHHHhhCCCCCCceEecCCCcccc------------c
Confidence 99999999998 7899999999964 3222 44567777777766544322345899999998753 1
Q ss_pred cchhhhhccccHHHHHHhhcccCCCCCCCCCCCCCCCC
Q 009297 495 RAYGINYFLENFDRLVEIKTKVDPDNFFRNEQSIPVLP 532 (538)
Q Consensus 495 ~~~~~~yyg~n~~RL~~IK~kYDP~~vF~~~q~I~~~~ 532 (538)
..|++.|||+||+||++||+||||+|+|+++|||+|.+
T Consensus 436 ~~~~~~yyg~n~~RL~~vK~kyDP~n~F~~~qsI~p~~ 473 (473)
T 3rja_A 436 DYATKVYYGENLARLQKLKAKFDPTDRFYYPQAVRPVK 473 (473)
T ss_dssp HHHHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCCC
T ss_pred hhHHHHHHHHHHHHHHHHhhccCchhhCCCCcCCCCCC
Confidence 24999999999999999999999999999999999864
No 5
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=7.4e-72 Score=600.16 Aligned_cols=450 Identities=21% Similarity=0.310 Sum_probs=347.7
Q ss_pred CcceEeCCCCCCcHHHHHhhhhccccCCCCCCCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEecCcCCCCCccccCCCe
Q 009297 47 IFQAIHTPQNSSYSSVLQSYIRNLRFNTSSTPKPVLIVAAMHESHVQAAIICAKKHNLQMKIRSGGHDYEGLSYVSNVPF 126 (538)
Q Consensus 47 ~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~~~g 126 (538)
+.+.|++|+|++|++++. .||......|.+|++|+|++||+++|++|+++++||.+|||||++.+.+.. ..+|
T Consensus 8 ~~~~~~~p~~~~y~~~~~------~~n~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~-~~~g 80 (501)
T 3pop_A 8 VPPFTVGREDPRYIELSH------SDNHRFVVEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCGQDFVGT-PRRD 80 (501)
T ss_dssp -CCEEEETTSTTHHHHTC------CSCTTSCCCCSEEEECSSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTS-SCCS
T ss_pred CCCceECCCCcchHHHHH------HHhhccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEeCCccCCCcccc-CCCE
Confidence 467899999999998863 344444589999999999999999999999999999999999999987632 2358
Q ss_pred EEEEecCcccEEEcCCCCeEEEeCCccHHHHHHHHHH-hCCccccCCCCCCccccccccccCCcCCCccccCccccceeE
Q 009297 127 FILDMFNLRSIDVDIESETAWVQAGAILGEVFYRIAE-KSKTHGFPAGVCPTVGVGGHFSAGGYGNMMRKYGLSVDNIVD 205 (538)
Q Consensus 127 ~vIdl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~~-~g~~l~~~~G~~~~vgigG~~~gGg~g~~~~~~G~~~D~v~~ 205 (538)
++|||++||+|++|+++++++||+|+++.+|+++|.+ +| +.+++|.|+++||||+++|||+|+++++||+++|+|++
T Consensus 81 vvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~ 158 (501)
T 3pop_A 81 LVLDLHNLHAIGPAADGAGVRVGSGATVDQVQKALFRRWN--AALPLGACSAVGMGGLVAGGGYGPLSRQLGLVVDHLHA 158 (501)
T ss_dssp EEEECTTCCCEEECTTSSSEEEETTCBHHHHHHHHHHHHS--BCCCCCSBTTCBHHHHHHHCCCCTTHHHHCCGGGGEEE
T ss_pred EEEEecccCCeEEcCCCCEEEEECCcCHHHHHHHHHhhcC--eEeCCCCCCCceEeeccccCCCcccccccccHHHhEEE
Confidence 9999999999999999999999999999999999974 67 77889999999999999999999999999999999999
Q ss_pred EEEEe--cCCe--EEe----ccCCCchhhhhhhhcc-CccEEEEEEEEEE----------eecC-ceEEEEEEecChh--
Q 009297 206 AKLVD--VNGR--ILD----RNSMGEDLFWAIRGGG-ASFGVVLAYKINL----------VPVP-ETVTVFKVEKTLE-- 263 (538)
Q Consensus 206 ~~vV~--a~G~--~~~----~~~~~~dLf~a~rG~~-g~~Givt~~~~~~----------~p~~-~~~~~~~~~~~~~-- 263 (538)
+|||+ +||+ ++. +..+|+|||||+|||| |+|||||+++||+ +|.+ ..+..+.+.|+..
T Consensus 159 ~evV~~da~G~~~~v~~~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~~~~~~~~~~~~p~~~~~v~~~~~~~~~~~~ 238 (501)
T 3pop_A 159 VEVAVVDESRTVRLVTARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFPWAMI 238 (501)
T ss_dssp EEEEEECTTSCEEEEEEETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECCCTTTCBTTTTBCBCCSEEEEEEEEEEGGGC
T ss_pred EEEEEecCCCCEEEEEeccCCCCCCccHHHHhhccCCCCcEEEEEEEEEeccccCCChhhcCCCCceEEEEEEEEchhhc
Confidence 99999 8999 443 2356899999999985 9999999999999 6654 3455555655432
Q ss_pred --hHHHHHHHHHHHhhh--cCCCCc--eEEEEEEecCCCCCCCcceEEEEEEEEeeCCHHHHHHhhhhcCC------CCC
Q 009297 264 --QDATDAVDKWQHVAH--KLDDGL--FIRLVLDVVNSSTRTGERTVRATFIALFLGGSERLLSITDKGFP------ELG 331 (538)
Q Consensus 264 --~~~~~~~~~~~~~~~--~~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~------~l~ 331 (538)
+...++++.|++|.. ..|++. .....+...+. .... +.+..++.|+.++..+++++++. .+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~g~~~~~~~~l~~~~~~~~~~~g~~ 312 (501)
T 3pop_A 239 DETSFVTVMRRFFEWHERHSEPGSPESSLFATFFVNHV----SSGV--LQLMVQQDADVDPEGEILARFVASLTEGTGVV 312 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCTTCGGGGEEEEEEEECG----GGCE--EEEEEEEETTTCTTCHHHHHHHHHHHTTSSCC
T ss_pred CHHHHHHHHHHHHHHHhhccCCCccccceEEEEEecCC----CCCe--EEEEEEEeCChHHHHHHHHHHHHhhhhccCCC
Confidence 234678888888765 356543 22222222111 1112 44556778887665454444322 122
Q ss_pred CCcccccccchHHHHhhhcCCCCCCCcccccCCCcccccccccccccccCCCCHhHHHHHHHHHHhc---CCceEEEeeC
Q 009297 332 LTRSDCTELSWIDSVVYWGSFPAGTPASVLLDRTPLTLSSLKRKSDYVTEPIPREGLEGLWKKMIEL---ERPYMNFNPY 408 (538)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~~~~~~~~~---~~~~i~~~~~ 408 (538)
+... +.+++|.+...++.. +.+.+ ....+++.|+.|+.++++++.++.+++.+.+. +.+.+.++++
T Consensus 313 p~~~-~~~~~~~~~~~~~~~-~~~~~---------~~~~~~~~ks~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 381 (501)
T 3pop_A 313 GIPR-GGVMSWLTGTRYMSQ-ADCGD---------VMGARSASKSAYHRAAPTDEQLSVLHRHLHADHPGQASYVMFNSY 381 (501)
T ss_dssp CEEE-EEEEEHHHHHHHTCB-CSCGG---------GTTCEEEEEEEEESSCCCHHHHHHHHHHHTSSSCCTTEEEEEEEC
T ss_pred ccce-eEEeCHHHHHhhhcC-CCCCc---------ccccccceecccccCCCCHHHHHHHHHHHHhcCCCCceEEEEEec
Confidence 2223 678899886554321 11100 01234677888988889999999999988753 2467889999
Q ss_pred CCccCCCCCCCCCCcCcCCCeeEEEEEeEeCCCChhhhhHHHHHHHHHHHhhcCccc------CCCCccccccCCcccCC
Q 009297 409 GGKMHEIPATASPFPHRDGNLWKIQYVTNWNEEGVDAANYYIDLTRQLYDYLTPFVS------KNPRQSFLAYRDLDLGT 482 (538)
Q Consensus 409 GGav~~v~~~atAf~~Rd~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~g~Y~Nyad~~~~~ 482 (538)
||++++++.++|||+||+ ..|++++...|.+++. ++++.+|++++++.+.++.+ ..+.++|+||+|.+++.
T Consensus 382 GGav~~v~~~~TAf~hR~-~~~~~~~~~~w~~~~~--~~~~~~w~~~~~~~~~~~~~g~p~~~~~~~gaYvNy~d~dl~~ 458 (501)
T 3pop_A 382 GGEINRRGPSDAAVPQRD-SVVKSSWFSAWQDAEL--DELHLGWLRGLYEEFFAGTGGVPVTGGRTDGCYINYPDADLLD 458 (501)
T ss_dssp CGGGGGSCTTTSSCCCCS-CSEEEEEEEEESCGGG--HHHHHHHHHHHHHHHTGGGTTSCCTTSSBCCCCTTSCCGGGGC
T ss_pred CcccccCCCCCCCccCcC-ccEEEEEEEEeCCcch--HHHHHHHHHHHHHHHHHhhcCCCCcCCCCCceeccCCCccccc
Confidence 999999999999999998 7899999999987653 37789999999999876531 12468999999988753
Q ss_pred CCCCCcCCcccccchhhhhccccHHHHHHhhcccCCCCCCCCCCCCCC
Q 009297 483 NNHKFETGYSEGRAYGINYFLENFDRLVEIKTKVDPDNFFRNEQSIPV 530 (538)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~yyg~n~~RL~~IK~kYDP~~vF~~~q~I~~ 530 (538)
++. ...+..|++.|||+||+||++||+||||+|+|+++|||+|
T Consensus 459 ~~~-----~~~~~~w~~~Yyg~N~~RL~~vK~kyDP~n~F~~~qsI~p 501 (501)
T 3pop_A 459 PAR-----NRSGEPWHHLYYKDNYARLRSAKRAWDPLNTFHHSMSIGL 501 (501)
T ss_dssp TTT-----CCSSCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred ccc-----ccccchHHHHHhHhHHHHHHHHHHHhCcccccCCCCCCCC
Confidence 110 0113349999999999999999999999999999999987
No 6
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=2.2e-68 Score=577.44 Aligned_cols=455 Identities=25% Similarity=0.400 Sum_probs=340.9
Q ss_pred HHhhhccCCCCCCCCcceEeCCCCCCcHHHHHhhhhccccCCCCCCCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEecC
Q 009297 33 FHQCLLNNSPPSHPIFQAIHTPQNSSYSSVLQSYIRNLRFNTSSTPKPVLIVAAMHESHVQAAIICAKKHNLQMKIRSGG 112 (538)
Q Consensus 33 ~~~cl~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggG 112 (538)
-.+||.+. ...|++|+|+.|++++ ...+|.||. ..|.+|++|+|++||+++|++|+++++||.+||||
T Consensus 23 ~~~~l~~~-------~~~v~~p~d~~Y~~~~-~~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggG 90 (523)
T 2wdx_A 23 GERCLPPA-------GPVKVTPDDPRYLNLK-LRGANSRFN----GEPDYIHLVGSTQQVADAVEETVRTGKRVAVRSGG 90 (523)
T ss_dssp ---CCCCC-------CCEEECTTSTTHHHHH-TCSSCTTCC----CCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSC
T ss_pred chhhcccC-------CCeEECCCCcchHHHH-hhhhhhccc----CCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCC
Confidence 34898884 3678999999999886 123466774 78999999999999999999999999999999999
Q ss_pred cCCCCCccccCCCeEEEEecCcccEEEcCCCCeEEEeCCccHHHHHHHHHH-hCCccccCCCCCCccccccccccCCcCC
Q 009297 113 HDYEGLSYVSNVPFFILDMFNLRSIDVDIESETAWVQAGAILGEVFYRIAE-KSKTHGFPAGVCPTVGVGGHFSAGGYGN 191 (538)
Q Consensus 113 h~~~g~s~~~~~~g~vIdl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~~-~g~~l~~~~G~~~~vgigG~~~gGg~g~ 191 (538)
|++.+.+. ...+|++|||++||+|++|+++++|+||+|++|.+|+++|.+ +| +.+++|.|++|||||+++|||+|+
T Consensus 91 h~~~g~~~-~~~~gvvIdl~~m~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~ 167 (523)
T 2wdx_A 91 HCFEDFVD-NPDVKVIIDMSLLTEIAYDPSMNAFLIEPGNTLSEVYEKLYLGWN--VTIPGGVCGGVGVGGHICGGGYGP 167 (523)
T ss_dssp CCSSSSSS-STTCCEEEECTTCCCEEEETTTTEEEECTTCBHHHHHHHHHHHHS--CCCCCCCCTTCBHHHHHHHTCCCT
T ss_pred CCCCCCcc-CCCCeEEEEcccCCCEEEcCCCCEEEEcCCCCHHHHHHHHHHhcC--eEEccCCCCCCeeCccccCCCCCc
Confidence 99998753 223689999999999999999999999999999999999984 88 678889999999999999999999
Q ss_pred CccccCccccceeEEEEEecC--CeEEe---ccC-CCch--hhhhhhhcc-CccEEEEEEEEEE-----------eecCc
Q 009297 192 MMRKYGLSVDNIVDAKLVDVN--GRILD---RNS-MGED--LFWAIRGGG-ASFGVVLAYKINL-----------VPVPE 251 (538)
Q Consensus 192 ~~~~~G~~~D~v~~~~vV~a~--G~~~~---~~~-~~~d--Lf~a~rG~~-g~~Givt~~~~~~-----------~p~~~ 251 (538)
++++||+++|+|+++|||++| |+++. +.. +++| ||||+|||+ |+|||||+++||+ +|.|+
T Consensus 168 ~s~~~G~~~D~v~~~evV~~d~~G~v~~~~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~~ 247 (523)
T 2wdx_A 168 LSRQFGSVVDYLYAVEVVVVNKQGKARVIVATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKPP 247 (523)
T ss_dssp THHHHCCGGGGEEEEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCCC
T ss_pred ccccccChhheEEEEEEEEecCCccEEEEecccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCCCc
Confidence 999999999999999999955 99752 222 4555 999999877 9999999999999 99876
Q ss_pred -eEEEEEEecChh----hHHHHHHHHHHHhhhc--CCCC----ceEEEEEEecCCCCCCCcceEEEEEEEEeeCCHHHHH
Q 009297 252 -TVTVFKVEKTLE----QDATDAVDKWQHVAHK--LDDG----LFIRLVLDVVNSSTRTGERTVRATFIALFLGGSERLL 320 (538)
Q Consensus 252 -~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~p~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 320 (538)
.+..+.+.|+.. +...++++.|++|... .|++ +...+.+. +. ..+.....+.+..+|.|+.++..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~--~~g~~~~~~~~~~~~~g~~~~~~ 323 (523)
T 2wdx_A 248 ATLLTSTVTFDWAGMTEAAFSRLLRNHGEWYERNSGPDSPYTGLWSQLMIG--NE--VPGMGESGFMMPIQVDATRPDAR 323 (523)
T ss_dssp SEEEEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEE--CC--CTTCTTCSEEEEEEEETTSTTHH
T ss_pred ccEEEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCccccceEEEEEec--cC--CCCCcceeEEEEEEEeCCHHHHH
Confidence 355566666542 2346788888887654 5665 23322222 11 11210112455677888876655
Q ss_pred HhhhhcC---CC-CC-CCcccccccchHHHHhhhcCCCCCCCcccccCCCcccccccccccccccCCCCHhHHHHHHHHH
Q 009297 321 SITDKGF---PE-LG-LTRSDCTELSWIDSVVYWGSFPAGTPASVLLDRTPLTLSSLKRKSDYVTEPIPREGLEGLWKKM 395 (538)
Q Consensus 321 ~~l~~~~---~~-l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~~~~~~ 395 (538)
+.+.+++ .+ ++ +.......++|.+....+. . . ..+++.++.++.+.++++.+..+++.+
T Consensus 324 ~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------------~--~-~~~~~~~s~~~~~~~~~~~~~~~~~~~ 387 (523)
T 2wdx_A 324 RLLDAHIEAVIDGVPPAEVPEPIEQRWLASTPGRG-------------G--R-GPASKTKAGYLRKRLTDRQIQAVYENM 387 (523)
T ss_dssp HHHHHHHHHHHTTCTTCBCCCCEEEETTSSCCCCC-------------S--S-CCEEEEEEEEESSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCccccceeccHHHHHHhhc-------------C--C-CCceeeecccccCCCCHHHHHHHHHHH
Confidence 5554422 11 22 2223334556554211100 0 0 113455677776678999999999887
Q ss_pred Hhc---CCceEEEeeCCCccCCCCCCCCCCcCcCCCeeEEEEEeEeCCCChhhhhHHHHHHHHHHHhhc------CcccC
Q 009297 396 IEL---ERPYMNFNPYGGKMHEIPATASPFPHRDGNLWKIQYVTNWNEEGVDAANYYIDLTRQLYDYLT------PFVSK 466 (538)
Q Consensus 396 ~~~---~~~~i~~~~~GGav~~v~~~atAf~~Rd~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 466 (538)
... +.+.+.++++||++++++.++|+|+||+ ..+++++...|.+++++ +...+|++++++.+. |+.+.
T Consensus 388 ~~~~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~~~~--~~~~~~~~~~~~~l~~~~~g~p~~~~ 464 (523)
T 2wdx_A 388 THMDGIDYGAVWLIGYGGKVNTVDPAATALPQRD-AILKVNYITGWANPGNE--AKHLTWVRKLYADVYAETGGVPVPND 464 (523)
T ss_dssp TCCTTCSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESSGGGH--HHHHHHHHHHHHHHTGGGTTSCCSCS
T ss_pred HhcCCCCceEEEEEecCCccccCCCccccccccC-ceEEEEEEEEcCCCccH--HHHHHHHHHHHHHHHhhhcCCCccCC
Confidence 653 2356778899999999999999999998 78999999999877644 778999999998886 32111
Q ss_pred CCCccccccCCcccCCCCCCCcCCcccccchhhhhccccHHHHHHhhcccCCCCCCCCCCCCCC
Q 009297 467 NPRQSFLAYRDLDLGTNNHKFETGYSEGRAYGINYFLENFDRLVEIKTKVDPDNFFRNEQSIPV 530 (538)
Q Consensus 467 ~~~g~Y~Nyad~~~~~~~~~~~~~~~~~~~~~~~yyg~n~~RL~~IK~kYDP~~vF~~~q~I~~ 530 (538)
...++|+||+|.+++.++ .+ .+ ...|++.|||+||+||++||+||||+|||+++|+|+|
T Consensus 465 ~~~g~Y~Ny~d~~~~~~~-~~-~s---~~~~~~~yyg~n~~RL~~iK~kyDP~~vF~~~qsI~p 523 (523)
T 2wdx_A 465 VSDGAYINYPDSDLADPG-LN-TS---GVPWHDLYYKGNHPRLRKVKAAYDPRNHFHHALSIRP 523 (523)
T ss_dssp SBCCCCTTSCCGGGGCTT-TC-CS---SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred CCCcceecCCcccccccc-cc-cc---hhHHHHHHHHHHHHHHHHHHHHhCcHhhcCCCCCCCC
Confidence 135799999998865210 00 11 1139999999999999999999999999999999986
No 7
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=1.1e-67 Score=572.11 Aligned_cols=457 Identities=23% Similarity=0.375 Sum_probs=338.7
Q ss_pred chHHhhhccCCCCCCCCcceEeCCCCCCcHHHHHhhhhccccCCCCCCCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEe
Q 009297 31 ESFHQCLLNNSPPSHPIFQAIHTPQNSSYSSVLQSYIRNLRFNTSSTPKPVLIVAAMHESHVQAAIICAKKHNLQMKIRS 110 (538)
Q Consensus 31 ~~~~~cl~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~g 110 (538)
.+...|+... ...|++|+|++|++++ +..+|.||. ..|.+|++|+|++||+++|++|+++++||.|||
T Consensus 19 ~~~~~~~~~~-------~~~v~~p~d~~Y~~~~-~~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~vrg 86 (521)
T 2ipi_A 19 FDGGACGART-------ALVKVDRVDRRYQDLV-TRGFNGRFR----GRPDVVYVVHTADQVVDAVNQAMAAGQRIAVRS 86 (521)
T ss_dssp -----------------CCCEEESSSTTHHHHH-TCCSCTTCC----CCCSEEEECSSHHHHHHHHHHHHHHTCCEEEES
T ss_pred ccccccccCC-------CCeEECCCCcchHHHH-hcccccccc----CCCCEEEEcCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 3456787774 3578999999999886 123466664 789999999999999999999999999999999
Q ss_pred cCcCCCCCccccCCCeEEEEecCcccEEEcCCCCeEEEeCCccHHHHHHHHH-HhCCccccCCCCCCccccccccccCCc
Q 009297 111 GGHDYEGLSYVSNVPFFILDMFNLRSIDVDIESETAWVQAGAILGEVFYRIA-EKSKTHGFPAGVCPTVGVGGHFSAGGY 189 (538)
Q Consensus 111 gGh~~~g~s~~~~~~g~vIdl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~-~~g~~l~~~~G~~~~vgigG~~~gGg~ 189 (538)
|||++.+.+. ...+|++|||++||+|++|+++++|+||+|++|.+|+++|. ++| +.+|+|.|+++||||+++|||+
T Consensus 87 gGh~~~g~~~-~~~~gvvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~ 163 (521)
T 2ipi_A 87 GGHCFEGFVD-DPAVRAVIDMSQMRQVFYDSGKRAFAVEPGATLGETYRALYLDWG--VTIPAGVCPQVGVGGHVLGGGY 163 (521)
T ss_dssp SCCCTTCGGG-CTTCCEEEECTTCCCEEEETTTTEEEECTTSBHHHHHHHHHHHHS--BCCCCCSCTTCBHHHHTTTTCC
T ss_pred CCcCCCCCcc-cCCCeEEEecccCCCeEEeCCCCEEEEeCCcCHHHHHHHHHHhcC--ceeCCCCCCCcccCCcccCCCC
Confidence 9999998753 23468999999999999999999999999999999999997 788 7788999999999999999999
Q ss_pred CCCccccCccccceeEEEEEecC--CeEE--e-ccC-CCc--hhhhhhhhcc-CccEEEEEEEEEE-----------eec
Q 009297 190 GNMMRKYGLSVDNIVDAKLVDVN--GRIL--D-RNS-MGE--DLFWAIRGGG-ASFGVVLAYKINL-----------VPV 249 (538)
Q Consensus 190 g~~~~~~G~~~D~v~~~~vV~a~--G~~~--~-~~~-~~~--dLf~a~rG~~-g~~Givt~~~~~~-----------~p~ 249 (538)
|+++++||+++|+|+++|||++| |+++ . +.. +++ |||||+|||+ |+|||||+++||+ +|.
T Consensus 164 g~~s~~~G~~~D~v~~~evV~~d~~G~i~~~~~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~~p~ 243 (521)
T 2ipi_A 164 GPLSRRDGVVADHLYAVEVVVVDASGRARKVVATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPSQLLPK 243 (521)
T ss_dssp CTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGGGSSCB
T ss_pred CccccccccHhhcEEEEEEEEecCCccEEEEecccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccCCCcccccCC
Confidence 99999999999999999999977 9864 2 221 444 5999999976 9999999999999 888
Q ss_pred Cc-eEEEEEEecChh----hHHHHHHHHHHHhhhc--CCCC----ceEEEEEEecCCCCCCCcceEEEEEEEEeeCCHHH
Q 009297 250 PE-TVTVFKVEKTLE----QDATDAVDKWQHVAHK--LDDG----LFIRLVLDVVNSSTRTGERTVRATFIALFLGGSER 318 (538)
Q Consensus 250 ~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~p~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 318 (538)
|+ .+..+.+.|+.. +...++++.|+++... .|++ +...+.+. +. .... +.+...|.|+.++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~l~~~~~~~--~~----~~~~--~~~~~~~~g~~~~ 315 (521)
T 2ipi_A 244 APTSTLRHIVTWDWSALTEEAFTRIIDNHGAWHQSNSAAGTPYASMHSVFYLN--SR----AAGQ--ILLDIQIDGGLDG 315 (521)
T ss_dssp CCSCEEEEEEEEESTTCCHHHHHHHHHHHHHHHHHSCSSSSGGGGCEEEEEEE--CT----TSCE--EEEEEEEETTSTT
T ss_pred CCceEEEEEEEecccccCHHHHHHHHHHHHHHHHhccCCCccccceEEEEEec--cC----CCCc--eEEEEEeccCHHH
Confidence 75 344444544321 2346788888887654 4554 33333322 11 1112 3445668887766
Q ss_pred HHHhhhhcC---CC-CC-CCcccccccchHHHHhhhcCCCCCCCcccccCCCcccccccccccccccCCCCHhHHHHHHH
Q 009297 319 LLSITDKGF---PE-LG-LTRSDCTELSWIDSVVYWGSFPAGTPASVLLDRTPLTLSSLKRKSDYVTEPIPREGLEGLWK 393 (538)
Q Consensus 319 ~~~~l~~~~---~~-l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~~~~ 393 (538)
..+++.+++ .. ++ +.......++|.+....+..... . ..+++.++.++.+.++++.+.++++
T Consensus 316 ~~~~l~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~------------~-~~~~~~~s~~~~~~~~~~~i~~~~~ 382 (521)
T 2ipi_A 316 AEALLNDFVAAVNEGTGVEPAVQRSTEPWLRATLANKFDTG------------G-FDRTKSKGAYLRKPWTAAQAATLYR 382 (521)
T ss_dssp HHHHHHHHHHHHTTTCSSCCEEEEEEECHHHHHTCCCCCCT------------T-CCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCccceeeecCHHHHHHhhcCCCC------------C-CccceeeccccccCCCHHHHHHHHH
Confidence 555544421 11 22 22234456788774432211000 0 0134456777766789999999999
Q ss_pred HHHhcC--CceEEEeeCCCccCCCCCCCCCCcCcCCCeeEEEEEeEeCCCChhhhhHHHHHHHHHHHhhcCccc------
Q 009297 394 KMIELE--RPYMNFNPYGGKMHEIPATASPFPHRDGNLWKIQYVTNWNEEGVDAANYYIDLTRQLYDYLTPFVS------ 465 (538)
Q Consensus 394 ~~~~~~--~~~i~~~~~GGav~~v~~~atAf~~Rd~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 465 (538)
.+.+.+ .+.+.++++||++++++.++|+|+||+ ..+++++...|.+++++ +...+|++++++.+.....
T Consensus 383 ~~~~~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~~~~--~~~~~~~~~~~~~~~~~~~g~p~~~ 459 (521)
T 2ipi_A 383 HLSADSQVWGEVSLYSYGGKVNSVPETATATAQRD-SIIKVWMSATWMDPAHD--DANLAWIREIYREIFATTGGVPVPD 459 (521)
T ss_dssp HHHSCCSSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESCGGGH--HHHHHHHHHHHHHHTTTTTSSCCSS
T ss_pred HHHhCCCCceEEEEEecCCcccCCCCccccccccc-hhhhcceeEecCCCCch--HHHHHHHHHHHHHHHhhhcCCCccc
Confidence 887643 466788999999999998999999998 78899999999877544 7789999999998873211
Q ss_pred CCCCccccccCCcccCCCCCCCcCCcccccchhhhhccccHHHHHHhhcccCCCCCCCCCCCCCCC
Q 009297 466 KNPRQSFLAYRDLDLGTNNHKFETGYSEGRAYGINYFLENFDRLVEIKTKVDPDNFFRNEQSIPVL 531 (538)
Q Consensus 466 ~~~~g~Y~Nyad~~~~~~~~~~~~~~~~~~~~~~~yyg~n~~RL~~IK~kYDP~~vF~~~q~I~~~ 531 (538)
....++|+||+|.+++.++. + .+ ...|++.|||+||+||++||+||||+|||+++|+|+|+
T Consensus 460 ~~~~g~Y~Ny~d~~~~~~~~-~-~~---~~~~~~~y~g~n~~RL~~iK~kyDP~~vF~~~qsI~p~ 520 (521)
T 2ipi_A 460 DRTEGTFINYPDVDLVDERW-N-TS---GVPWYTLYYKGNYPRLQKVKARWDPRDVFRHALSVRPP 520 (521)
T ss_dssp SSBCCCCTTSCCGGGGCTTT-S-CC---SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred CCCCceEeCCCCcccccccc-c-cc---hhhHHHhhhhhHHHHHHHHHHHhCCcCEecCCCCCCCC
Confidence 11357999999998652110 0 11 12499999999999999999999999999999999985
No 8
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=1.1e-67 Score=570.39 Aligned_cols=459 Identities=22% Similarity=0.413 Sum_probs=351.9
Q ss_pred CCCcchHHhhhccCCCCCCCCcceEeCCCCCCcHHHHHhhhhccccCCCCCCCccEEEEcCCHHHHHHHHHHHHhCCCcE
Q 009297 27 VNSHESFHQCLLNNSPPSHPIFQAIHTPQNSSYSSVLQSYIRNLRFNTSSTPKPVLIVAAMHESHVQAAIICAKKHNLQM 106 (538)
Q Consensus 27 ~~~~~~~~~cl~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~ 106 (538)
......|+.||.... ..+++|+++.|+... .+|+......|.+|++|+|++||+++|++|+++++|+
T Consensus 3 ~~~~~~l~~~l~~~~-------~~~~~~~~~~y~~~~------~~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~ 69 (503)
T 1zr6_A 3 EAEFNSINACLAAAD-------VEFHEEDSEGWDMDG------TAFNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQI 69 (503)
T ss_dssp CCTTCHHHHHHHHTT-------CEECCTTSHHHHHHT------SCSBGGGCCCCSEEEECCSHHHHHHHHHHHHHHTCCE
T ss_pred hHHHHHHHHhhCcCC-------ceecCCCccchHHHh------hhhhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCCeE
Confidence 345678999998732 357899999998763 2566555689999999999999999999999999999
Q ss_pred EEEecCcCCCCCccccCCCeEEEEecCcccEEEcCCCCeEEEeCCccHHHHHHHHHHhCCccccCCCCCCcccccccccc
Q 009297 107 KIRSGGHDYEGLSYVSNVPFFILDMFNLRSIDVDIESETAWVQAGAILGEVFYRIAEKSKTHGFPAGVCPTVGVGGHFSA 186 (538)
Q Consensus 107 ~~~ggGh~~~g~s~~~~~~g~vIdl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~G~~~~vgigG~~~g 186 (538)
.+||||||+.+.+.....+|++|||++||+|++| ++++|+||+|+++.+|+++|.+++ ++.+|.|.|+++||||+++|
T Consensus 70 ~v~ggGh~~~~~~~~~~~~gvvIdl~~l~~i~~d-~~~~v~v~aG~~~~~l~~~l~~~~-gl~~~~G~~~~vgvgG~~~g 147 (503)
T 1zr6_A 70 SAKGGGHSYGSYGFGGEDGHLMLELDRMYRVSVD-DNNVATIQGGARLGYTALELLDQG-NRALSHGTCPAVGVGGHVLG 147 (503)
T ss_dssp EEESSCCCTTCTTTTSSSSCEEEECTTCCCEEEC-TTSCEEEETTCBHHHHHHHHHHTT-SEECCCCSCTTSBHHHHHHH
T ss_pred EEECCCcCCCCCcccCCCCcEEEECccCCCEEEC-CCCeEEEecCCCHHHHHHHHHHcC-CEEeCCCCCCcCchhhhhcC
Confidence 9999999999865322345899999999999999 888999999999999999997765 37788999999999999999
Q ss_pred CCcCCCccccCccccceeEEEEEecCCeEEe-ccCCCchhhhhhhhccCccEEEEEEEEEEeecCceEEEEEEecCh-hh
Q 009297 187 GGYGNMMRKYGLSVDNIVDAKLVDVNGRILD-RNSMGEDLFWAIRGGGASFGVVLAYKINLVPVPETVTVFKVEKTL-EQ 264 (538)
Q Consensus 187 Gg~g~~~~~~G~~~D~v~~~~vV~a~G~~~~-~~~~~~dLf~a~rG~~g~~Givt~~~~~~~p~~~~~~~~~~~~~~-~~ 264 (538)
||+|+++++||+++|+|+++|||++||++++ +..+|+|||||+|||+|+|||||+++||++|.|+....+.+.+.. .+
T Consensus 148 Gg~g~~s~~~G~~~D~v~~~~vV~a~G~i~~~~~~~~~dL~~a~rG~~g~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~ 227 (503)
T 1zr6_A 148 GGYGFATHTHGLTLDWLIGATVVLADASIVHVSETENADLFWALRGGGGGFAIVSEFEFNTFEAPEIITTYQVTTTWNRK 227 (503)
T ss_dssp CCCSTTHHHHCCGGGGEEEEEEECTTSCEEEEBTTBSHHHHHHHTTCCSSSCEEEEEEECCEECCSCEEEEEEEECCCHH
T ss_pred CCCCcccccccChhheEEEEEEEecCCCEEEeCCCCCccHHHHHhccCCCcEEEEEEEEEEEecCceeEEEEEEEeCCHH
Confidence 9999999999999999999999999999995 455789999999999999999999999999998766555555543 33
Q ss_pred HHHHHHHHHHHhhhc-CCCCceEEEEEEecCCCCCCCcceEEEEEEEEeeCCHHHHHHhhhhcCCCCCC--Ccccccccc
Q 009297 265 DATDAVDKWQHVAHK-LDDGLFIRLVLDVVNSSTRTGERTVRATFIALFLGGSERLLSITDKGFPELGL--TRSDCTELS 341 (538)
Q Consensus 265 ~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~--~~~~~~~~~ 341 (538)
.+.++++.|+++... +|+++...+.+.. . .+.+..+|+|+.++..+++.+++..++. ...++..++
T Consensus 228 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---------~--~~~~~~~~~g~~~~~~~~l~pl~~~~~~~~~~~~~~~~~ 296 (503)
T 1zr6_A 228 QHVAGLKALQDWAQNTMPRELSMRLEINA---------N--ALNWEGNFFGNAKDLKKILQPIMKKAGGKSTISKLVETD 296 (503)
T ss_dssp HHHHHHHHHHHHHHHTCCTTBCCEEEEET---------T--EEEEEEEESSCHHHHHHHHHHHHHHTTSCEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHhhcCChhHEEEEEEeC---------C--eEEEEEEEECCHHHHHHHHHHHHHhcCcCCCcCceeeCC
Confidence 457888899998876 8888877665431 1 2555678999998887776654332332 123345677
Q ss_pred hHHHHhhhcCCCCCCCcccccCCCcccccccccccccccCCCCHhHHHHHHHHHH-hcC-----CceEEEeeCCC---cc
Q 009297 342 WIDSVVYWGSFPAGTPASVLLDRTPLTLSSLKRKSDYVTEPIPREGLEGLWKKMI-ELE-----RPYMNFNPYGG---KM 412 (538)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~~~~~~~-~~~-----~~~i~~~~~GG---av 412 (538)
|.+....+.. +..... ..+...+..++.++.++.+ ++++.++.+++.+. ..+ .+.+.++++|| ++
T Consensus 297 ~~~~~~~~~~---~~~~~~--~~p~g~~~~~~~~s~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~av 370 (503)
T 1zr6_A 297 WYGQINTYLY---GADLNI--TYNYDVHEYFYANSLTAPR-LSDEAIQAFVDYKFDNSSVRPGRGWWIQWDFHGGKNSAL 370 (503)
T ss_dssp HHHHHTTSCT---TCCSSC--SSCCCCCBCEEEEEEEESS-CCHHHHHHHHHHHHHSCCCCTTEEEEEEEEECCSTTCSG
T ss_pred HHHHHHHHcC---CCcccc--cCCCCccccceecccchhh-CCHHHHHHHHHHHHhhCCCCCCcceEEEEEEcCCchhhh
Confidence 7764322211 000000 0011112345667777766 88999999998887 532 13477899999 88
Q ss_pred CCCCCCCCCCcCcCCCeeEEEEEeEe-----CCCChhhhhHHHHHHHHHHHhhcCcccCCCCccccccCCcccCCCCCCC
Q 009297 413 HEIPATASPFPHRDGNLWKIQYVTNW-----NEEGVDAANYYIDLTRQLYDYLTPFVSKNPRQSFLAYRDLDLGTNNHKF 487 (538)
Q Consensus 413 ~~v~~~atAf~~Rd~~~~~~~~~~~W-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~Y~Nyad~~~~~~~~~~ 487 (538)
.+++.++|+|+||+ +.+++++...| .++..+ +...+|++++.+.+.........|+|+||+|.+++
T Consensus 371 ~~~~~~~ta~~~R~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~g~Y~Nyad~~~~------ 441 (503)
T 1zr6_A 371 AAVSNDETAYAHRD-QLWLWQFYDSIYDYENNTSPYP--ESGFEFMQGFVATIEDTLPEDRKGKYFNYADTTLT------ 441 (503)
T ss_dssp GGSCTTTSSCCCTT-CSEEEEEEEEETTTTTCCTTTT--TSCHHHHHHHHHHHHTTSCGGGCBCCGGGCCTTCC------
T ss_pred cCCCcccCCccccc-ceeEEEEEeeeccccCCCccch--HHHHHHHHHHHHHHHhhCCCCCCceeccCCCcccc------
Confidence 88888999999998 77888886776 333222 44457777766665543211123799999997653
Q ss_pred cCCcccccchhhhhccccHHHHHHhhcccCCCCCCCCCCCCCCCC
Q 009297 488 ETGYSEGRAYGINYFLENFDRLVEIKTKVDPDNFFRNEQSIPVLP 532 (538)
Q Consensus 488 ~~~~~~~~~~~~~yyg~n~~RL~~IK~kYDP~~vF~~~q~I~~~~ 532 (538)
...|++.|||+||+||++||+||||+|||+++|+|+|..
T Consensus 442 ------~~~~~~~~yG~n~~RL~~iK~kyDP~~vF~~~~~i~~~~ 480 (503)
T 1zr6_A 442 ------KEEAQKLYWRGNLEKLQAIKAKYDPEDVFGNVVSVEPIA 480 (503)
T ss_dssp ------HHHHHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCCC
T ss_pred ------cchHHHHHHHhHHHHHHHHHHHhCchhhcCCCCCCCchh
Confidence 125999999999999999999999999999999998853
No 9
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=2.3e-67 Score=569.94 Aligned_cols=448 Identities=26% Similarity=0.438 Sum_probs=338.4
Q ss_pred cceEeCCCCCCcHHHHHhhhhccccCCCCCCCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEecCcCCCCCccccCCCeE
Q 009297 48 FQAIHTPQNSSYSSVLQSYIRNLRFNTSSTPKPVLIVAAMHESHVQAAIICAKKHNLQMKIRSGGHDYEGLSYVSNVPFF 127 (538)
Q Consensus 48 ~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~~~g~ 127 (538)
...|++|+|++|+++++. +|.|| ...|.+|++|+|++||+++|++|+++++||.+|||||++.+.+. ...+|+
T Consensus 33 ~~~v~~p~~~~Y~~~~~~--~n~~~----~~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~-~~~~gv 105 (530)
T 2y3s_A 33 HIDSVAPGDIRYEDLRRG--ENLRF----VGDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVRSGGHCYEDFVA-NSDVRV 105 (530)
T ss_dssp -CCEECTTSTTHHHHTCC--SCTTC----CCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTT-CTTCCE
T ss_pred CceEECCCCccHHHHHhH--hhhhc----cCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEECCCCCCCCCcc-cCCCeE
Confidence 457899999999998642 35555 47899999999999999999999999999999999999998753 234689
Q ss_pred EEEecCcccEEEcCCCCeEEEeCCccHHHHHHHHHH-hCCccccCCCCCCccccccccccCCcCCCccccCccccceeEE
Q 009297 128 ILDMFNLRSIDVDIESETAWVQAGAILGEVFYRIAE-KSKTHGFPAGVCPTVGVGGHFSAGGYGNMMRKYGLSVDNIVDA 206 (538)
Q Consensus 128 vIdl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~~-~g~~l~~~~G~~~~vgigG~~~gGg~g~~~~~~G~~~D~v~~~ 206 (538)
+|||++||+|++|+++++|+||+|++|.+|+++|.+ +| +.+++|.|++||+||+++|||+|+++++||+++|+|+++
T Consensus 106 vIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~ 183 (530)
T 2y3s_A 106 VMDMSRLSAVGFDEERGAFAVEAGATLGAVYKTLFRVWG--VTLPGGACPDVGAGGHILGGGYGPLSRMHGSIVDYLHAV 183 (530)
T ss_dssp EEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHHS--CCCCCCSCTTCBHHHHHHTTCCCTTHHHHCCGGGGEEEE
T ss_pred EEEcccCCCEEEcCCCCEEEEeCCCCHHHHHHHHHhhcC--eEEeCCCCCCCCcCCCcCCCCCCcccccccchhhheeeE
Confidence 999999999999999999999999999999999985 88 678899999999999999999999999999999999999
Q ss_pred EEEe--cCCeEE--e-ccC-CCc--hhhhhhhhcc-CccEEEEEEEEEE------------eecCc-eEEEEEEecChh-
Q 009297 207 KLVD--VNGRIL--D-RNS-MGE--DLFWAIRGGG-ASFGVVLAYKINL------------VPVPE-TVTVFKVEKTLE- 263 (538)
Q Consensus 207 ~vV~--a~G~~~--~-~~~-~~~--dLf~a~rG~~-g~~Givt~~~~~~------------~p~~~-~~~~~~~~~~~~- 263 (538)
|||+ +||+++ . +.. +++ |||||+|||| |+|||||+++||+ +|.|+ .+..+.+.|+..
T Consensus 184 evV~~d~~G~i~~v~~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 263 (530)
T 2y3s_A 184 EVVVVDASGDARTVIATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRTAEADVPPEPGRLLPRPPAEVLLNTTVWPWEG 263 (530)
T ss_dssp EEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECCCCSSCCSCGGGSSCCCCSEEEEEEEEEESTT
T ss_pred EEEEecCCCcEEEEeccccccCCChHHHHHHhcCCCCCcEEEEEEEEEeecccCccccccccCCCCceEEEEEEEecccc
Confidence 9999 459974 2 222 455 5999999986 9999999999999 88875 444445544321
Q ss_pred ---hHHHHHHHHHHHhhhc--CCCC----ceEEEEEEecCCCCCCCcceEEEEEEEEeeCCHHHHHHhhhhcC---CC-C
Q 009297 264 ---QDATDAVDKWQHVAHK--LDDG----LFIRLVLDVVNSSTRTGERTVRATFIALFLGGSERLLSITDKGF---PE-L 330 (538)
Q Consensus 264 ---~~~~~~~~~~~~~~~~--~p~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~---~~-l 330 (538)
+...++++.|+++... .|++ +...+.+. .. .... +.+...|.|+.++..+++.+++ .. +
T Consensus 264 ~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~----~~~~--~~~~~~~~g~~~~~~~~l~p~~~~l~~~~ 335 (530)
T 2y3s_A 264 LDEAAFARLVRNHGRWFEQNSGPDSPWCDLYSVLALT--RS----QSGA--LAMTTQLDATGPDAEKRLETYLAAVSEGV 335 (530)
T ss_dssp CCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEE--CG----GGSE--EEEEEEEECCSTTHHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHHHHHhhhcCCCCcccceeEEEEEec--cC----CCCc--EEEEEEEeCCHHHHHHHHHHHHHHHHhhc
Confidence 2346788888887654 4554 23322221 11 1112 3445668888766555554421 11 2
Q ss_pred C-CCcccccccchHHHHhhhcCCCCCCCcccccCCCcccccccccccccccCCCCHhHHHHHHHHHHhcC----CceEEE
Q 009297 331 G-LTRSDCTELSWIDSVVYWGSFPAGTPASVLLDRTPLTLSSLKRKSDYVTEPIPREGLEGLWKKMIELE----RPYMNF 405 (538)
Q Consensus 331 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~~~~~~~~~~----~~~i~~ 405 (538)
+ +....+..++|.+....+.....+ . .. ..++.++.++.+.++++.++.+++.+...+ .+.+.+
T Consensus 336 g~~~~~~~~~~~~~~~~~~~~~~~~~--------~--~~-~r~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 404 (530)
T 2y3s_A 336 GVQPHSDTRRLPWLHSTRWPGIAGDG--------D--MT-GRAKIKAAYARRSFDDRQIGTLYTRLTSTDYDNPAGVVAL 404 (530)
T ss_dssp SSCCEEEEEEEEHHHHTTCHHHHCCC--------C--CC-SEEEEEEEEESSCCCHHHHHHHHHHHHCSSSCCTTCEEEE
T ss_pred CCCccceeeeccHHHHHHhhcCCCCC--------c--cc-ccceeeccccccCCCHHHHHHHHHHHHhcCCCCCceEEEE
Confidence 2 222345667887643222110111 0 00 234566777776789999999999887532 367889
Q ss_pred eeCCCccCCCCCCCCCCcCcCCCeeEEEEEeEeCCCChhhhhHHHHHHHHHHHhhcCcc------cCCCCccccccCCcc
Q 009297 406 NPYGGKMHEIPATASPFPHRDGNLWKIQYVTNWNEEGVDAANYYIDLTRQLYDYLTPFV------SKNPRQSFLAYRDLD 479 (538)
Q Consensus 406 ~~~GGav~~v~~~atAf~~Rd~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~Y~Nyad~~ 479 (538)
+++||++++++.++|+|+||+ +.+++++...|.+++++ +...+|++++++.+.... +....++|+||+|.+
T Consensus 405 ~~~GGav~~~~~~~ta~~~R~-~~~~~~~~~~w~~~~~~--~~~~~w~~~~~~~l~~~~~g~p~~~~~~~g~Y~Ny~d~~ 481 (530)
T 2y3s_A 405 IAYGGKVNAVPADRTAVAQRD-SILKIVYVTTWEDPAQD--PVHVRWIRELYRDVYADTGGVPVPGGAADGAYVNYPDVD 481 (530)
T ss_dssp EECCGGGGGSCTTSSSCCCCS-CSEEEEEEEEECCTTCH--HHHHHHHHHHHHHHTGGGTTSCCTTTTBCCCCTTSCCGG
T ss_pred EecCCccccCCCCcCcccccc-cceeEEEEEecCCCcch--HHHHHHHHHHHHHHHhhhcCCCcccCCCCceEeCCcCcc
Confidence 999999999999999999998 78999999999877644 778999999999886321 111357999999988
Q ss_pred cCCCCCCCcCCcccccchhhhhccccHHHHHHhhcccCCCCCCCCCCCCCCC
Q 009297 480 LGTNNHKFETGYSEGRAYGINYFLENFDRLVEIKTKVDPDNFFRNEQSIPVL 531 (538)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~yyg~n~~RL~~IK~kYDP~~vF~~~q~I~~~ 531 (538)
++.++ .+ .+ ...|++.|||+||+||++||+||||+|||+++|+|+|+
T Consensus 482 ~~~~~-~~-~s---~~~~~~~yyg~n~~RL~~iK~kyDP~nvF~~~q~I~p~ 528 (530)
T 2y3s_A 482 LADEE-WN-TS---GVPWSELYYKDAYPRLQAVKARWDPRNVFRHALSVRVP 528 (530)
T ss_dssp GGCTT-TC-CS---SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred ccccc-cc-cc---hhHHHHHHHHHHHHHHHHHHHHhCchhhcCCCCCCCCC
Confidence 65211 00 11 12499999999999999999999999999999999987
No 10
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=3.9e-65 Score=545.62 Aligned_cols=433 Identities=22% Similarity=0.338 Sum_probs=332.2
Q ss_pred CcceEeCCCCCCcHHHHHhhhhccccCCCCCCCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEecCcCCCCCccccCCCe
Q 009297 47 IFQAIHTPQNSSYSSVLQSYIRNLRFNTSSTPKPVLIVAAMHESHVQAAIICAKKHNLQMKIRSGGHDYEGLSYVSNVPF 126 (538)
Q Consensus 47 ~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~~~g 126 (538)
+++.|++|+|+.|++.+. +|+......|.+|+.|+|++||+++|++|+++++|+.+||||||+.+.+. ..+|
T Consensus 12 ~~~~v~~p~~~~y~~~~~------~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~--~~~g 83 (459)
T 2bvf_A 12 IQGEVIYPDDSGFDAIAN------IWDGRHLQRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYAT--NDGG 83 (459)
T ss_dssp CSSEEECTTSTTHHHHHC------CSCTTCCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTC--CSSS
T ss_pred CCceEECCCCccHHHHHH------HhhhhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCccc--cCCe
Confidence 368899999999998643 57777778999999999999999999999999999999999999998752 3468
Q ss_pred EEEEecCcccEEEcCCCCeEEEeCCccHHHHHHHHHHhCCccccCCCCCCccccccccccCCcCCCccccCccccceeEE
Q 009297 127 FILDMFNLRSIDVDIESETAWVQAGAILGEVFYRIAEKSKTHGFPAGVCPTVGVGGHFSAGGYGNMMRKYGLSVDNIVDA 206 (538)
Q Consensus 127 ~vIdl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~G~~~~vgigG~~~gGg~g~~~~~~G~~~D~v~~~ 206 (538)
++|||++||+|++|+++.+|+||+|++|.+|+++|.++| +.+++|.|+++||||+++|||+|+++++||+++|+|+++
T Consensus 84 vvi~l~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~G--l~~~~g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~~~ 161 (459)
T 2bvf_A 84 IVLDLRLMNSIHIDTAGSRARIGGGVISGDLVKEAAKFG--LAAVTGMHPKVGFCGLALNGGVGFLTPKYGLASDNILGA 161 (459)
T ss_dssp EEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHTTT--EEECCCSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEEEE
T ss_pred EEEECCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHcC--CEecCCCCCCcccceeecCCCCccccccccCHhHhEEEE
Confidence 999999999999999999999999999999999999998 788889999999999999999999999999999999999
Q ss_pred EEEecCCeEEe-ccCCCchhhhhhhhccCccEEEEEEEEEEeecCceEEEEEEecChhhHHH--HHHHHHHHhhhcCCCC
Q 009297 207 KLVDVNGRILD-RNSMGEDLFWAIRGGGASFGVVLAYKINLVPVPETVTVFKVEKTLEQDAT--DAVDKWQHVAHKLDDG 283 (538)
Q Consensus 207 ~vV~a~G~~~~-~~~~~~dLf~a~rG~~g~~Givt~~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~p~~ 283 (538)
|||++||++++ +..+|+|||||+|||+|+|||||+++||++|.|+.+....+.++..+ .. ++++.|+++...+|++
T Consensus 162 ~vV~~~G~i~~~~~~~~~dLf~a~rg~~g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 240 (459)
T 2bvf_A 162 TLVTATGDVIYCSDDERPELFWAVRGAGPNFGVVTEVEVQLYELPRKMLAGFITWAPSV-SELAGLLTSLLDALNEMADH 240 (459)
T ss_dssp EEECTTSCEEEEESSSSHHHHHHHHHHGGGTCEEEEEEEEEEECCCCEEEEEEEECCCH-HHHHHHHHHHHHHHHHTTTT
T ss_pred EEEcCCCeEEEeCCCCChhhHhHhhccCCccEEEEEEEEEEEECCCcEEEEEEEechHH-hhHHHHHHHHHHHHHhCcHh
Confidence 99999999994 45578999999999889999999999999999765555555555422 34 7888888888777877
Q ss_pred ceEEEEEEecCCCCCCCcceEEEEEEEEeeCCHHHHHHhhhhcCCCCC-CCcccccccchHHHHhhhc---CCCCCCCcc
Q 009297 284 LFIRLVLDVVNSSTRTGERTVRATFIALFLGGSERLLSITDKGFPELG-LTRSDCTELSWIDSVVYWG---SFPAGTPAS 359 (538)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 359 (538)
+...+... .. ..+. ..+.+...|.|+.++..+.+.++ .+++ .....+..++|.+...... .++.
T Consensus 241 ~~~~~~~~-~~---~~~~--~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 308 (459)
T 2bvf_A 241 IYPSVFVG-VD---ENRA--PSVTVCVGHLGGLDIAERDIARL-RGLGRTVSDSIAVRSYDEVVALNAEVGSFED----- 308 (459)
T ss_dssp CCCEEEEE-EC---TTCC--EEEEEEEECCSCHHHHHHHHHHH-HTTSCCSEECCEEECHHHHHHHHHHHSCCCC-----
T ss_pred hccccccC-cc---cCCC--ceEEEEEEEeCCHHHHHHHHHHH-HHhCcchhcceeecCHHHHHhcccccccCCC-----
Confidence 74333111 11 1122 23555678899987766666543 3343 2334456677876332211 1110
Q ss_pred cccCCCccccccccc-ccccccCCCCHhHHHHHHHHHHhcC-Cc-eEEEeeCCCccCCCCCCCCCCcCcCCCeeEEEEEe
Q 009297 360 VLLDRTPLTLSSLKR-KSDYVTEPIPREGLEGLWKKMIELE-RP-YMNFNPYGGKMHEIPATASPFPHRDGNLWKIQYVT 436 (538)
Q Consensus 360 ~~~~~~~~~~~~~~~-~s~~~~~~l~~~~i~~~~~~~~~~~-~~-~i~~~~~GGav~~v~~~atAf~~Rd~~~~~~~~~~ 436 (538)
. ...+.. ++.++.+.++++.++++++.+.+.+ .. .+.++.+||++.+ .+.|||+||+ ..+ +++..
T Consensus 309 -------~-~~~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~--~~~ta~~~R~-~~~-~~~~~ 376 (459)
T 2bvf_A 309 -------G-MSNLWIDREIAMPNARFAEAIAGNLDKFVSEPASGGSVKLEIEGMPFGN--PKRTPARHRD-AMG-VLALA 376 (459)
T ss_dssp -------S-CEEEEEEEEECSCHHHHHHHHHTTGGGCEEETTTTEEEEEEEECCCCCC--TTCCSSCCCS-SCE-EEEEE
T ss_pred -------C-CcceEeccccccCCCCCHHHHHHHHHHHhhCCCCCceeEEEEeCCccCC--CCCCCcccCC-cce-EEEEE
Confidence 1 112222 4555543355566666555554433 22 3344555888776 5679999998 567 88899
Q ss_pred EeCCCC-hhhhhHHHHHHHHHHHhhcCcccCCCCccccccCCcccCCCCCCCcCCcccccchhhhhcccc-HHHHHHhhc
Q 009297 437 NWNEEG-VDAANYYIDLTRQLYDYLTPFVSKNPRQSFLAYRDLDLGTNNHKFETGYSEGRAYGINYFLEN-FDRLVEIKT 514 (538)
Q Consensus 437 ~W~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~Y~Nyad~~~~~~~~~~~~~~~~~~~~~~~yyg~n-~~RL~~IK~ 514 (538)
.|.++. ++ +...+|++++.+.+.++......|+|+||+|.+. ..|++.|||+| |+||++||+
T Consensus 377 ~w~~~~~~~--~~~~~~~~~~~~~l~~~~~~p~~g~Y~N~~d~~~--------------~~~~~~~yG~~n~~rL~~iK~ 440 (459)
T 2bvf_A 377 EWSGAAPGS--EKYPELARELDAALLRAGVTTSGFGLLNNNSEVT--------------AEMVAEVYKPEVYSRLAAVKR 440 (459)
T ss_dssp EECTTSTTT--THHHHHHHHHHHHHHHTTCEEEEECCGGGCSSCC--------------HHHHHHHHCHHHHHHHHHHHH
T ss_pred EeCCCccch--HHHHHHHHHHHHHhcccccCCCCCeeeCCCCCcc--------------hHHHHHHhCcchHHHHHHHHH
Confidence 998775 33 5678999999999988742112479999998752 24899999987 999999999
Q ss_pred ccCCCCCCCCCCCCCC
Q 009297 515 KVDPDNFFRNEQSIPV 530 (538)
Q Consensus 515 kYDP~~vF~~~q~I~~ 530 (538)
||||+|+|+++|+|+|
T Consensus 441 kyDP~~vF~~~~~I~p 456 (459)
T 2bvf_A 441 EYDPENRFRHNYNIDP 456 (459)
T ss_dssp HHCTTCCCCSSSCCCC
T ss_pred HhCcccccCCCCCCCC
Confidence 9999999999999987
No 11
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=2.9e-40 Score=359.37 Aligned_cols=218 Identities=17% Similarity=0.256 Sum_probs=172.1
Q ss_pred CcchHHhhhccCCCCCCCCcceEeCCCCCCcHHHHHhhhhccccCCCCCCCccEEEEcCCHHHHHHHHHHHHh--C-CCc
Q 009297 29 SHESFHQCLLNNSPPSHPIFQAIHTPQNSSYSSVLQSYIRNLRFNTSSTPKPVLIVAAMHESHVQAAIICAKK--H-NLQ 105 (538)
Q Consensus 29 ~~~~~~~cl~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~--~-~~~ 105 (538)
..+.+.+||..... .+.|.+ +...+.. + ...|+......|.+|++|+|++||+++|++|++ + ++|
T Consensus 30 ~~~~~~~~l~~~~~-----~~~v~~-~~~~~~~----~--~~d~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~~ 97 (534)
T 1w1o_A 30 RGRPWPASLAALAL-----DGKLRT-DSNATAA----A--STDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYT 97 (534)
T ss_dssp ----------CTTT-----TTCEEC-SHHHHHH----T--SCCTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCC
T ss_pred chHHHHHHHHhcCC-----CceEec-CHHHHHH----H--hccccccccCCCCEEEecCCHHHHHHHHHHHHhcCCCCce
Confidence 56788889888321 244554 2222322 2 224666566899999999999999999999998 6 999
Q ss_pred EEEEecCcCCCCCccccCCCeEEEEecCccc------EEEcCCCCeEEEeCCccHHHHHHHHHHhCCccccCC-CCCCcc
Q 009297 106 MKIRSGGHDYEGLSYVSNVPFFILDMFNLRS------IDVDIESETAWVQAGAILGEVFYRIAEKSKTHGFPA-GVCPTV 178 (538)
Q Consensus 106 ~~~~ggGh~~~g~s~~~~~~g~vIdl~~l~~------i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~-G~~~~v 178 (538)
+.+||||||+.|.+.. .+|++|||++||+ +++|+++.+++||||++|.+|++++.++| +..+. +.+..+
T Consensus 98 v~~~G~G~~~~g~~~~--~~gvvi~l~~m~~i~~~~~~~~d~~~~~v~v~aGv~~~~l~~~~~~~G--l~~~~~~~~~~~ 173 (534)
T 1w1o_A 98 IAFRGRGHSLMGQAFA--PGGVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARG--VAPRSWTDYLYL 173 (534)
T ss_dssp EEEESSCCCSSSTTCC--TTSEEEEGGGGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTT--EEESCCCSSCCS
T ss_pred EEEECCCCCCCCCcCC--CCeEEEECccccccccCccEEEcCCCCEEEECCCcCHHHHHHHHHHCC--CcccCCCCCCCE
Confidence 9999999999988642 3689999999998 48898889999999999999999999999 54443 445678
Q ss_pred ccccccccCCcCCCccccCccccceeEEEEEecCCeEEe-ccCCCchhhhhhhhccCccEEEEEEEEEEeecCceEEEEE
Q 009297 179 GVGGHFSAGGYGNMMRKYGLSVDNIVDAKLVDVNGRILD-RNSMGEDLFWAIRGGGASFGVVLAYKINLVPVPETVTVFK 257 (538)
Q Consensus 179 gigG~~~gGg~g~~~~~~G~~~D~v~~~~vV~a~G~~~~-~~~~~~dLf~a~rG~~g~~Givt~~~~~~~p~~~~~~~~~ 257 (538)
+|||.+++||+|..+++||.++|+|+++|||++||++++ ...+|+||||++|||+|+|||||+++||++|.|+....+.
T Consensus 174 tvGG~v~~~g~g~~~~~yG~~~d~v~~~evV~~dG~v~~~~~~~~~dL~~~~rGs~G~~GIVt~~~l~l~p~~~~~~~~~ 253 (534)
T 1w1o_A 174 TVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGLGQFGVITRARIAVEPAPARARWVR 253 (534)
T ss_dssp BHHHHHTTCCCSTTHHHHCCGGGSEEEEEEEETTSCEEEEESSSSHHHHHHHTTCTTCSEEEEEEEEEEEECCSEEEEEE
T ss_pred EeceeccCCCccccccccccHhhhEEEEEEEeCCccEEEECCCCChhhHhhhcCCCCCcEEEEEEEEEEEECCcceEEEE
Confidence 999999999999999999999999999999999999994 4557899999999988999999999999999998655555
Q ss_pred EecCh
Q 009297 258 VEKTL 262 (538)
Q Consensus 258 ~~~~~ 262 (538)
+.+..
T Consensus 254 ~~~~~ 258 (534)
T 1w1o_A 254 FVYTD 258 (534)
T ss_dssp EEESC
T ss_pred EEeCC
Confidence 55543
No 12
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=100.00 E-value=9.6e-33 Score=298.90 Aligned_cols=197 Identities=22% Similarity=0.348 Sum_probs=164.5
Q ss_pred ccCCCCCCCccEEEEcCCHHHHHHHHHHHHh-CCCcEEEEecCcCCCCCccccCCCeEEEEecCcccEEEcC-----CC-
Q 009297 71 RFNTSSTPKPVLIVAAMHESHVQAAIICAKK-HNLQMKIRSGGHDYEGLSYVSNVPFFILDMFNLRSIDVDI-----ES- 143 (538)
Q Consensus 71 r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~-~~~~~~~~ggGh~~~g~s~~~~~~g~vIdl~~l~~i~~d~-----~~- 143 (538)
.|+......|.+|++|+|++||+++|++|++ +++|+.+||||||+.|.+.. .+|++|||++||+|++|. +.
T Consensus 53 d~~~~~~~~P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~g~~~~--~~gvvidl~~m~~i~i~~~~~~~~~~ 130 (524)
T 2exr_A 53 DFGGMNCVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSINGQAMA--EGGLVVDMSTTAENHFEVGYLSGGDA 130 (524)
T ss_dssp CTTCCCCCCCSEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSSSTTCC--TTSEEEEGGGGTTSCEEEEECCSSSS
T ss_pred cccccccCCCCEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCCCcccC--CCEEEEECcCCCCcEEeecccCCCCC
Confidence 3665566789999999999999999999996 99999999999999988642 268999999999987766 55
Q ss_pred -CeEEEeCCccHHHHHHHHH-HhCCccccC-CCCCCccccccccccCCcCCCccccCccccceeEEEEEecCCeEEe-cc
Q 009297 144 -ETAWVQAGAILGEVFYRIA-EKSKTHGFP-AGVCPTVGVGGHFSAGGYGNMMRKYGLSVDNIVDAKLVDVNGRILD-RN 219 (538)
Q Consensus 144 -~~v~v~~G~~~~~l~~~l~-~~g~~l~~~-~G~~~~vgigG~~~gGg~g~~~~~~G~~~D~v~~~~vV~a~G~~~~-~~ 219 (538)
.+++||||++|.++++.+. ++| +..+ .+.++.++|||.++++|.|..+.+||.++|+|++++||++||++++ ..
T Consensus 131 ~~~v~v~aGv~~~~l~~~~l~~~G--l~~~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d~V~~l~vV~~dG~v~~~~~ 208 (524)
T 2exr_A 131 TAFVDVSGGALWEDVLKRCVSEYG--LAPRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGNGDVVTCSE 208 (524)
T ss_dssp SEEEEEETTCBHHHHHHHHHHHHS--EECSCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGGSEEEEEEEETTSCEEEEES
T ss_pred ceEEEEeCCcCHHHHHHHHHHHcC--CCCCCCCcCCceeecccCCCCCCcccccccCcHhhhEEEEEEEecCCeEEEECC
Confidence 7999999999999865544 898 4422 2455678999999999999999999999999999999999999994 44
Q ss_pred CCCchhhhhhhhccCccEEEEEEEEEEeecCceEEEEEEecChhhHHHHHHH
Q 009297 220 SMGEDLFWAIRGGGASFGVVLAYKINLVPVPETVTVFKVEKTLEQDATDAVD 271 (538)
Q Consensus 220 ~~~~dLf~a~rG~~g~~Givt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 271 (538)
.+++||||++||+.|+|||||+++||++|.|+...+..+.+...+.+.+.+.
T Consensus 209 ~~~~dL~~~~~Gs~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~~~~~~~ 260 (524)
T 2exr_A 209 IENSELFFSVLGGLGQFGIITRARVLLQPAPDMVRWIRVVYTEFDEFTQDAE 260 (524)
T ss_dssp SSSHHHHHHHTTCTTSSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHHH
T ss_pred CCChhHHhHhhcCCCccEEEEEEEEEEEEcCCeeEEEEEEeCCHHHHHHHHH
Confidence 5689999999988899999999999999999866555566654333334443
No 13
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=100.00 E-value=3.2e-33 Score=310.42 Aligned_cols=202 Identities=23% Similarity=0.204 Sum_probs=175.1
Q ss_pred cCCCCCCCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEecCcCCCCCcccc---CCCeEEEEecCcccE-EEcCCCCeEE
Q 009297 72 FNTSSTPKPVLIVAAMHESHVQAAIICAKKHNLQMKIRSGGHDYEGLSYVS---NVPFFILDMFNLRSI-DVDIESETAW 147 (538)
Q Consensus 72 ~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~---~~~g~vIdl~~l~~i-~~d~~~~~v~ 147 (538)
|+..++..|.+||+|+|++||+++|++|+++++||++||||||+.|.+... ..++|+|||++||+| +||+++++++
T Consensus 198 ~~g~~~~~P~aVV~P~s~eeV~~iv~~A~~~~ipVvprGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~at 277 (658)
T 4bby_A 198 REGMFERIPDIVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAH 277 (658)
T ss_dssp HSSCCSCCCSEEEECCSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEE
T ss_pred hCCcccCCcCEEEeeCCHHHHHHHHHHHHHCCCeEEEECCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEE
Confidence 556677899999999999999999999999999999999999988654332 235788999999998 8999999999
Q ss_pred EeCCccHHHHHHHHHHhCCccccCCCCCCccccccccccCCcCCCccccCccccceeEEEEEecCCeEEe-----ccCCC
Q 009297 148 VQAGAILGEVFYRIAEKSKTHGFPAGVCPTVGVGGHFSAGGYGNMMRKYGLSVDNIVDAKLVDVNGRILD-----RNSMG 222 (538)
Q Consensus 148 v~~G~~~~~l~~~l~~~g~~l~~~~G~~~~vgigG~~~gGg~g~~~~~~G~~~D~v~~~~vV~a~G~~~~-----~~~~~ 222 (538)
||||+++.+|.++|.++|+.+.+.+++...++|||++++++.|..+.+||.+.|+|+++|||++||++++ +...+
T Consensus 278 VeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG~iAtna~G~~s~rYG~~~d~VlgleVVlpdG~i~~~~~~~k~~aG 357 (658)
T 4bby_A 278 VEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWISTRASGMKKNIYGNIEDLVVHMKVVTPRGVIEKSCQGPRMSTG 357 (658)
T ss_dssp EETTCBHHHHHHHHHHHTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEEECSCCCSSCCSS
T ss_pred EecCchHHHHHHHHHHcCCccCCCCCCccccEEeehhhcCCCCCCccCcCCHHHheeeEEEEeCCCcccccccccccCCC
Confidence 9999999999999999996555556888889999999999999999999999999999999999999983 23457
Q ss_pred chhhhhhhhccCccEEEEEEEEEEeecCceEEEEEEecChhhHHHHHHHHH
Q 009297 223 EDLFWAIRGGGASFGVVLAYKINLVPVPETVTVFKVEKTLEQDATDAVDKW 273 (538)
Q Consensus 223 ~dLf~a~rG~~g~~Givt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (538)
+||+|.++|+.|+|||||+++||++|.|+......+.++..+.+.+++..+
T Consensus 358 yDL~~L~iGSEGTLGIITeatLrL~P~P~~~~~~~~~f~d~~~a~~av~~i 408 (658)
T 4bby_A 358 PDIHHFIMGSEGTLGVITEATIKIRPTPEYQKYGSVAFPNFEQGVACLREI 408 (658)
T ss_dssp SCTHHHHTTCTTSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHH
T ss_pred cCHHHHhccCCCcCcceeeeeeeeccCCccccccccccCCchhhhhhHHHH
Confidence 899999998889999999999999999997666666665544444444433
No 14
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=99.98 E-value=6.1e-32 Score=288.70 Aligned_cols=204 Identities=22% Similarity=0.276 Sum_probs=174.7
Q ss_pred ccCCCCCCCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEecCcCCCCCccccCCCeEEEEecCcccE-EEcCCCCeEEEe
Q 009297 71 RFNTSSTPKPVLIVAAMHESHVQAAIICAKKHNLQMKIRSGGHDYEGLSYVSNVPFFILDMFNLRSI-DVDIESETAWVQ 149 (538)
Q Consensus 71 r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~~~g~vIdl~~l~~i-~~d~~~~~v~v~ 149 (538)
.|+......|.+|++|+|++||+++|++|+++++|++++|||||+.|.+.. ..+|++|||++||+| ++|+++.+++||
T Consensus 43 d~~~~~~~~p~~vv~P~s~eeV~~~v~~a~~~~~pv~~~GgGt~~~g~~~~-~~ggvvIdl~~m~~i~~id~~~~~v~V~ 121 (476)
T 3pm9_A 43 EERNLYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQGGNTGLVGGQTP-HNGEVVISLKRMDKIREIDTSSNTITVE 121 (476)
T ss_dssp CTTCCCBCCCSCEECCCSHHHHHHHHHHHHHHTCCEEEESSSCCSSSTTCC-CSSCEEEECTTCCCEEEEETTTTEEEEE
T ss_pred ccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCccC-CCCcEEEEeeCCCceEEEcCCCCeEEEC
Confidence 465555678999999999999999999999999999999999999987643 346899999999999 899999999999
Q ss_pred CCccHHHHHHHHHHhCCccccCCCCCCccccccccccCCcCCCccccCccccceeEEEEEecCCeEEec------cCCCc
Q 009297 150 AGAILGEVFYRIAEKSKTHGFPAGVCPTVGVGGHFSAGGYGNMMRKYGLSVDNIVDAKLVDVNGRILDR------NSMGE 223 (538)
Q Consensus 150 ~G~~~~~l~~~l~~~g~~l~~~~G~~~~vgigG~~~gGg~g~~~~~~G~~~D~v~~~~vV~a~G~~~~~------~~~~~ 223 (538)
||++|.+|+++|.++|+.+.+.++++..++|||.+.+++.|..+.+||.++|+|+++|||++||++++. +..++
T Consensus 122 aGv~~~~l~~~l~~~Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~~yG~~~d~V~~levV~~dG~v~~~~~~~~k~~~g~ 201 (476)
T 3pm9_A 122 AGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLARDMALGVEVVLADGRVMNLLSKLKKDNTGY 201 (476)
T ss_dssp TTCBHHHHHHHHHHTTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEECTTSCEEECCCCCSCCCSSC
T ss_pred CCcCHHHHHHHHHHhCCccCCCCCCCCcEEEccccCCCCCCCcccccCcHHHheeEEEEEccCCeEEEcCCcccCCCCCc
Confidence 999999999999999943334457777889999999999999999999999999999999999999942 33568
Q ss_pred hhhhhhhhccCccEEEEEEEEEEeecCceEEEEEEecChhhHHHHHHHHHHH
Q 009297 224 DLFWAIRGGGASFGVVLAYKINLVPVPETVTVFKVEKTLEQDATDAVDKWQH 275 (538)
Q Consensus 224 dLf~a~rG~~g~~Givt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (538)
||+|+++|+.|+|||||+++||++|.|+......+.++..+.+.+++..++.
T Consensus 202 dl~~l~~Gs~GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~~ 253 (476)
T 3pm9_A 202 DLRDLFIGAEGTLGIITAATLKLFPKPRAVETAFVGLQSPDDALKLLGIAQG 253 (476)
T ss_dssp CCHHHHTTSTTSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHHHHHHHHH
T ss_pred CHHHHhccCCCCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHHHHHHHHH
Confidence 9999999888999999999999999998665555556544445555555544
No 15
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=99.97 E-value=3e-31 Score=289.56 Aligned_cols=198 Identities=21% Similarity=0.231 Sum_probs=165.0
Q ss_pred CCCCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEecCcCCCCCccccC--CCeEEEEecCcccE-EEcCCCCeEEEeCCc
Q 009297 76 STPKPVLIVAAMHESHVQAAIICAKKHNLQMKIRSGGHDYEGLSYVSN--VPFFILDMFNLRSI-DVDIESETAWVQAGA 152 (538)
Q Consensus 76 ~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~--~~g~vIdl~~l~~i-~~d~~~~~v~v~~G~ 152 (538)
....|.+|++|+|++||+++|++|+++++|+.++|||||+.|.+.... .++++|||++||+| ++|+++.+++||||+
T Consensus 134 ~~~~p~~vv~P~s~eeV~~iv~~a~~~~~pv~~~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aGv 213 (584)
T 2uuu_A 134 VKNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGI 213 (584)
T ss_dssp CCCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETTC
T ss_pred cCCCCCEEEeCCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCCC
Confidence 346899999999999999999999999999999999999987654221 35788999999999 899999999999999
Q ss_pred cHHHHHHHHHHhCCccccCCCCCCccccccccccCCcCCCccccCccccceeEEEEEecCCeEEe----ccCCCchhhhh
Q 009297 153 ILGEVFYRIAEKSKTHGFPAGVCPTVGVGGHFSAGGYGNMMRKYGLSVDNIVDAKLVDVNGRILD----RNSMGEDLFWA 228 (538)
Q Consensus 153 ~~~~l~~~l~~~g~~l~~~~G~~~~vgigG~~~gGg~g~~~~~~G~~~D~v~~~~vV~a~G~~~~----~~~~~~dLf~a 228 (538)
++.+|+++|.++|+.+...+++...++|||.+++|++|+.+.+||.++|+|+++|||++||++++ ++..++||+|+
T Consensus 214 ~~~~l~~~l~~~Gl~~~~~p~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~levVl~dG~i~~~~~~~~~~g~dl~~~ 293 (584)
T 2uuu_A 214 MGPELEKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRNGARSGAGINYKHI 293 (584)
T ss_dssp BHHHHHHHHHHTTEECCCCCTTGGGCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEECCC-------CCCTHHH
T ss_pred cHHHHHHHHHHcCCeeCcCCCccCCeeEeeeccCCCCcccccCcCcHHHheeeEEEEeCCCCEEECCccccCCCcchhhh
Confidence 99999999999994332223334567999999999999999999999999999999999999875 34468999999
Q ss_pred hhhccCccEEEEEEEEEEeecCceEEEEEEecChhhHHHHHHHHH
Q 009297 229 IRGGGASFGVVLAYKINLVPVPETVTVFKVEKTLEQDATDAVDKW 273 (538)
Q Consensus 229 ~rG~~g~~Givt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (538)
++|+.|+|||||+++||++|.|+....+.+.++..+.+.+++..+
T Consensus 294 ~~GseGtlGIIT~~tlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~ 338 (584)
T 2uuu_A 294 ILGSEGTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSALQQI 338 (584)
T ss_dssp HTTCTTSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHH
T ss_pred hccCCCCcEEEEEEEEEEEecccceEEEEEEcCCHHHHHHHHHHH
Confidence 998889999999999999999986656566665433344444444
No 16
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=99.97 E-value=2.1e-30 Score=276.94 Aligned_cols=198 Identities=17% Similarity=0.249 Sum_probs=165.7
Q ss_pred ccCCCCCCCccEEEEcCCHHHHHHHHHHHHhC--CCcEEEEecCcCCCCCccccCCCeEEEEecCcccE-EEcCCCCeEE
Q 009297 71 RFNTSSTPKPVLIVAAMHESHVQAAIICAKKH--NLQMKIRSGGHDYEGLSYVSNVPFFILDMFNLRSI-DVDIESETAW 147 (538)
Q Consensus 71 r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~--~~~~~~~ggGh~~~g~s~~~~~~g~vIdl~~l~~i-~~d~~~~~v~ 147 (538)
.|.. ....|.++++|+|++||+++|++|+++ ++|+.++|+|||+.+.+. ..+|++|||++||+| ++|+++++|+
T Consensus 35 ~W~~-~~~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~G~G~s~~~~~~--~~~gvvIdl~~l~~i~~~d~~~~~v~ 111 (481)
T 4feh_A 35 GWGR-TAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGDNAQ--NGGGLVIDMTPLNTIHSIDADTKLVD 111 (481)
T ss_dssp CTTC-CSCEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEECSSCSSSSTTC--CTTSEEEECTTCCCEEEEETTTTEEE
T ss_pred cccC-CCCCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEEeCCcCCCCCCC--CcCeEEEECccCCCceEEcCCCCEEE
Confidence 4743 468999999999999999999999999 799999999999977642 246899999999999 9999999999
Q ss_pred EeCCccHHHHHHHHHHhCCccccCCCCCCccccccccccCCcCCCccccCccccceeEEEEEecCCeEEe-ccC-CCchh
Q 009297 148 VQAGAILGEVFYRIAEKSKTHGFPAGVCPTVGVGGHFSAGGYGNMMRKYGLSVDNIVDAKLVDVNGRILD-RNS-MGEDL 225 (538)
Q Consensus 148 v~~G~~~~~l~~~l~~~g~~l~~~~G~~~~vgigG~~~gGg~g~~~~~~G~~~D~v~~~~vV~a~G~~~~-~~~-~~~dL 225 (538)
||||+++.+|+++|.++|+.+...+|. ..++|||.+++|++|..++.||..+|+|++++||++||++++ +.. +|+||
T Consensus 112 v~aGv~l~~L~~~l~~~Gl~l~~~~g~-~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~~s~~~~~~dL 190 (481)
T 4feh_A 112 IDAGVNLDQLMKAALPFGLWVPVLPGT-RQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHLTPTGEDAEL 190 (481)
T ss_dssp EETTCBHHHHHHHHGGGTEECSCCCSC-SCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEEECSSSTTHHH
T ss_pred EcCCccHHHHHHHHHHcCCEEEEeCCc-CccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEEeCCCCCChHH
Confidence 999999999999999999433222344 577899999999999999999999999999999999999994 444 68999
Q ss_pred hhhhhhccCccEEEEEEEEEEeecCceEEEE-EEecChhhHHHHHHHHHHH
Q 009297 226 FWAIRGGGASFGVVLAYKINLVPVPETVTVF-KVEKTLEQDATDAVDKWQH 275 (538)
Q Consensus 226 f~a~rG~~g~~Givt~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 275 (538)
|||+|||.|+|||||+++||++|.++..... ...+. ...++++.+++
T Consensus 191 f~a~rgs~G~~GIIt~~tl~l~p~~~~~~~~~~~~~~---~l~~~~~~~~~ 238 (481)
T 4feh_A 191 FWATVGGNGLTGIIMRATIEMTPTSTAYFIADGDVTA---SLDETIALHSD 238 (481)
T ss_dssp HHHHTTCTTTTCEEEEEEEECEECSCSEEEEEEEECS---SHHHHHHHHSS
T ss_pred HHHhhccCCCceEEEEEEEEEEeCCccEEEEEEEeCC---CHHHHHHHHHH
Confidence 9999998899999999999999998643222 22222 23455555553
No 17
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=99.97 E-value=4.7e-30 Score=278.18 Aligned_cols=197 Identities=21% Similarity=0.288 Sum_probs=162.9
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEecCcCCC-CCccccCCCeEEEEecCcccE-EEcCCCCeEEEeCCccH
Q 009297 77 TPKPVLIVAAMHESHVQAAIICAKKHNLQMKIRSGGHDYE-GLSYVSNVPFFILDMFNLRSI-DVDIESETAWVQAGAIL 154 (538)
Q Consensus 77 ~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~-g~s~~~~~~g~vIdl~~l~~i-~~d~~~~~v~v~~G~~~ 154 (538)
...|.+|++|+|++||+++|++|+++++|+.++|+|||+. |.+.....+|++|||++||+| ++|+++.+++||||+++
T Consensus 54 ~~~p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~g~G~~~~~g~~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aGv~~ 133 (520)
T 1wvf_A 54 AHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSAAPVQRGQVILDLKKMNKIIKIDPEMCYALVEPGVTF 133 (520)
T ss_dssp GGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTSCSSTTCEEEECTTCCCEEEEETTTTEEEECTTCCH
T ss_pred CCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCCCCCCCCeEEEECCCCCceEEECCCCCEEEECCCCCH
Confidence 4689999999999999999999999999999999999986 654321246899999999999 99999999999999999
Q ss_pred HHHHHHHHHhCCccccCCC---CCCccccccccccCCcCCCccccCccccceeEEEEEecCCeEEecc---CCCchhhhh
Q 009297 155 GEVFYRIAEKSKTHGFPAG---VCPTVGVGGHFSAGGYGNMMRKYGLSVDNIVDAKLVDVNGRILDRN---SMGEDLFWA 228 (538)
Q Consensus 155 ~~l~~~l~~~g~~l~~~~G---~~~~vgigG~~~gGg~g~~~~~~G~~~D~v~~~~vV~a~G~~~~~~---~~~~dLf~a 228 (538)
.+|+++|.++|+ .++++ ....+||||.+++||.|.. +||..+|+|+++|||++||++++.. ..++|+|++
T Consensus 134 ~~l~~~l~~~Gl--~~~~~~~p~~~~~~igG~~~~~g~g~~--~yG~~~d~v~~~evV~~dG~v~~~~~~~~~~~~l~~~ 209 (520)
T 1wvf_A 134 GQMYDYIQENNL--PVMLSFSAPSAIAGPVGNTMDRGVGYT--PYGEHFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQI 209 (520)
T ss_dssp HHHHHHHHHTTC--SEECCCCSSCTTCCHHHHHHTTCBCSS--TTCBGGGGEEEEEEECTTSCEEECGGGGSTTCSCTTT
T ss_pred HHHHHHHHHcCC--cccCCCCCCCCeeeeeecccCCCcCCc--cccchhhcEeeeEEEcCCCcEEEeCCCcCCCchhHhh
Confidence 999999999995 44433 2337889999999998875 9999999999999999999999532 357888777
Q ss_pred hhhccC----------ccEEEEEEEEEEeecCceEEEEEEecChhhHHHHHHHHHHHhh
Q 009297 229 IRGGGA----------SFGVVLAYKINLVPVPETVTVFKVEKTLEQDATDAVDKWQHVA 277 (538)
Q Consensus 229 ~rG~~g----------~~Givt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (538)
.||+.| +|||||+++||++|.|+....+.+.++..+.+.++++.++.+.
T Consensus 210 ~~~~~Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~~f~~~~~~~~~~~~~~~~~ 268 (520)
T 1wvf_A 210 FKWGYGPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFEDEADIVEIVDALRPLR 268 (520)
T ss_dssp CSCCSSCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEEEECCGGGHHHHHHHHHHHH
T ss_pred hcCCCCcchhhhccCCceEEEEEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHHHHHH
Confidence 665534 9999999999999999876666666665444555565666543
No 18
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.96 E-value=9.1e-30 Score=277.53 Aligned_cols=196 Identities=12% Similarity=0.149 Sum_probs=164.6
Q ss_pred cceEeCC-CCCCcHHHHHhhhhccccCCCCCCCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEecCcCCCCCccccC---
Q 009297 48 FQAIHTP-QNSSYSSVLQSYIRNLRFNTSSTPKPVLIVAAMHESHVQAAIICAKKHNLQMKIRSGGHDYEGLSYVSN--- 123 (538)
Q Consensus 48 ~~~v~~p-~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~--- 123 (538)
.+.|++| +++.|++.. ..|+......|.+|+.|+|++||+++|++|+++++|+.++|||||+.+.+...+
T Consensus 9 ~~~~~~p~~~~~y~~~~------~~w~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~v~~~G~G~s~~~~~l~~~~~~ 82 (561)
T 2i0k_A 9 PTPPNFPNDIALFQQAY------QNWSKEIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANV 82 (561)
T ss_dssp CCCTTCCTTSCCEEEEE------ECTTSSSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCC
T ss_pred CCceecCCCCHhHHHHH------hhhhhccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEECCCCCcccccccCCCcC
Confidence 4567788 999998742 258777778999999999999999999999999999999999999976543221
Q ss_pred CCeEEEEe-cCcccEEEcC--CCCeEEEeCCccHHHHHHHHHHhCCccccCC-CCCCccccccccccCCcCCC-------
Q 009297 124 VPFFILDM-FNLRSIDVDI--ESETAWVQAGAILGEVFYRIAEKSKTHGFPA-GVCPTVGVGGHFSAGGYGNM------- 192 (538)
Q Consensus 124 ~~g~vIdl-~~l~~i~~d~--~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~-G~~~~vgigG~~~gGg~g~~------- 192 (538)
.+|++||| ++||+|++|+ ++++|+||||+++.+|.++|.++| +.++. +..+.++|||.+.+|++|..
T Consensus 83 ~~gvvIdl~~~l~~i~vd~~~~~~~v~v~aGv~l~~L~~~l~~~G--l~l~~~~~~~~~TvGG~i~~~~~G~~l~~gG~~ 160 (561)
T 2i0k_A 83 EKVILADTMTHLNGITVNTGGPVATVTAGAGASIEAIVTELQKHD--LGWANLPAPGVLSIGGALAVNAHGAALPAVGQT 160 (561)
T ss_dssp TTEEEEECTTTSCCEEEECCSSSCEEEEETTSBHHHHHHHHHHTT--EECSSCCSCTTCBHHHHHHTTCCCSCCCCTTCC
T ss_pred CCeEEEechhhCCceEecCcCCccEEEEcCCCCHHHHHHHHHHcC--CcccccCCCCCcccCCCcccCCcccccccCCcc
Confidence 25799999 8999999998 789999999999999999999999 45543 23366789999887777765
Q ss_pred ---ccccCccccceeEEEEEecCCe---EEeccCCCchhhhhhhhccCccEEEEEEEEEEeecCceE
Q 009297 193 ---MRKYGLSVDNIVDAKLVDVNGR---ILDRNSMGEDLFWAIRGGGASFGVVLAYKINLVPVPETV 253 (538)
Q Consensus 193 ---~~~~G~~~D~v~~~~vV~a~G~---~~~~~~~~~dLf~a~rG~~g~~Givt~~~~~~~p~~~~~ 253 (538)
+.+||..+|+|+++|||++||+ +++...+++||+|+++|. |. ||||+++||++|.++..
T Consensus 161 ~~s~~~~G~~~d~V~~~evV~~dG~~~~~~~~~~~~~dl~~a~~g~-G~-giIt~~tl~l~p~~~~~ 225 (561)
T 2i0k_A 161 TLPGHTYGSLSNLVTELTAVVWNGTTYALETYQRNDPRITPLLTNL-GR-CFLTSVTMQAGPNFRQR 225 (561)
T ss_dssp CCTTCCSSCGGGGEEEEEEEEECSSSEEEEEEETTSGGGHHHHSCT-TS-SCEEEEEEECEECCEEE
T ss_pred cccccccccHhheEEEEEEEeCCCCEEEeeeccCCCccHHHHHhcC-CC-EEEEEEEEEEEECCceE
Confidence 6789999999999999999999 664444579999999854 44 89999999999998744
No 19
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.96 E-value=5.5e-29 Score=266.08 Aligned_cols=188 Identities=14% Similarity=0.198 Sum_probs=155.4
Q ss_pred CCCCcHHHHHhhhhccccCCCCCCCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEecCcCCCCCccc---cCCCeEEEEe
Q 009297 55 QNSSYSSVLQSYIRNLRFNTSSTPKPVLIVAAMHESHVQAAIICAKKHNLQMKIRSGGHDYEGLSYV---SNVPFFILDM 131 (538)
Q Consensus 55 ~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~---~~~~g~vIdl 131 (538)
+-+.|+.. +. .|+......|.+|++|+|++||+++|++|+++++|+.++|+|||+.+.++. ...+|++|||
T Consensus 11 ~i~~y~~~----~~--nWs~~~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~GgGhs~~~l~~~gG~~~~~GVvIdl 84 (540)
T 3js8_A 11 EIPLYKQS----FK--NWAGDIKVDDVWTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGVSCPAVVLLDT 84 (540)
T ss_dssp TSCCEEEE----EE--CTTSCCEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTCSSCSEEEEET
T ss_pred ccchhcce----ee--ccccccCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEEeCCCCcccccccCCCCCCCeEEEEC
Confidence 44556543 22 488888889999999999999999999999999999999999998633221 1235899999
Q ss_pred c-CcccEEEcCC--CCeEEEeCCccHHHHHHHHHHhCCccccCC-CCCCccccccccccCCcCCC----------ccccC
Q 009297 132 F-NLRSIDVDIE--SETAWVQAGAILGEVFYRIAEKSKTHGFPA-GVCPTVGVGGHFSAGGYGNM----------MRKYG 197 (538)
Q Consensus 132 ~-~l~~i~~d~~--~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~-G~~~~vgigG~~~gGg~g~~----------~~~~G 197 (538)
+ +||+|++|++ .++|+||||+++.+|+++|.++| +.++. +.++.++|||.+++|++|.. +++||
T Consensus 85 s~~Ln~I~vD~~~~~~tVtV~AGv~l~~L~~~L~~~G--L~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G 162 (540)
T 3js8_A 85 TRYLTAMSIDASGPVAKVTAQAGITMEALLTGLEKAG--LGVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYG 162 (540)
T ss_dssp TTTCCCEEEECSSSSEEEEEETTSBHHHHHHHHHHTT--EECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSS
T ss_pred cCcCCCEEECCCCCccEEEEccCCCHHHHHHHHHHcC--CEEEecCCCCCeEEcccccCCCCcccccccccccccccccc
Confidence 5 7999999985 58999999999999999999999 55552 33467899999999999886 68999
Q ss_pred ccccceeEEEEEecCCe-----EEeccCCCchhhhhhhhccCccEEEEEEEEEEeecCce
Q 009297 198 LSVDNIVDAKLVDVNGR-----ILDRNSMGEDLFWAIRGGGASFGVVLAYKINLVPVPET 252 (538)
Q Consensus 198 ~~~D~v~~~~vV~a~G~-----~~~~~~~~~dLf~a~rG~~g~~Givt~~~~~~~p~~~~ 252 (538)
..+|+|++++||++||+ +++.+.+++||| ++|+|.|+ ||||+++||++|.++.
T Consensus 163 ~~~D~V~~levV~adG~~~~~~i~~~s~~~~DL~-a~r~G~G~-gIVTevtlrl~P~~~l 220 (540)
T 3js8_A 163 SISNLVLSLTAVVYDKASGAYALRKFARNDPQIA-PLLAHVGR-SLIVEATLQAAPNQRL 220 (540)
T ss_dssp CGGGGEEEEEEEEEETTTTEEEEEEEETTSGGGH-HHHTCTTS-SCEEEEEEEEEECCEE
T ss_pred cHHHhEEEEEEEcCCCCCceeeEEEeCCCChhHH-HHHhcCCC-eEEEEEEEEEEECCce
Confidence 99999999999999998 665444689984 55655576 6999999999999864
No 20
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=99.96 E-value=7.5e-29 Score=262.20 Aligned_cols=173 Identities=18% Similarity=0.263 Sum_probs=154.7
Q ss_pred ccCCCCCCCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEecCcCCCCCccccCCCeEEEEecCcccE-EEcCCCCeEEEe
Q 009297 71 RFNTSSTPKPVLIVAAMHESHVQAAIICAKKHNLQMKIRSGGHDYEGLSYVSNVPFFILDMFNLRSI-DVDIESETAWVQ 149 (538)
Q Consensus 71 r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~~~g~vIdl~~l~~i-~~d~~~~~v~v~ 149 (538)
.|+......|.+|++|+|++||+++|++| +|+.++|||||+.+.+. ...+|++|||++||+| ++|+++++++||
T Consensus 12 ~w~~~~~~~p~~v~~P~s~~ev~~~v~~a----~~v~~~G~G~s~~~~~~-~~~~g~vi~l~~l~~i~~~d~~~~~v~v~ 86 (422)
T 2vfr_A 12 NWAGNITYTAKELLRPHSLDALRALVADS----ARVRVLGSGHSFNEIAE-PGDGGVLLSLAGLPSVVDVDTAARTVRVG 86 (422)
T ss_dssp CSSSSCBCSCSSCBCCSSHHHHHHHHHHC----SSEEECSSCCCCSSTTC-CCTTCEEECSTTSCCCEEEETTTTEEEEE
T ss_pred cCCCCccCCCCEEEeCCCHHHHHHHHHhC----CCEEEEECCCCCCCCcc-CCCCcEEEEhhhCCCcEEEcCCCCEEEEc
Confidence 47777778999999999999999999998 89999999999988864 3346899999999998 899999999999
Q ss_pred CCccHHHHHHHHHHhCCccccC-CCCCCccccccccccCCcCCCccccCccccceeEEEEEecCCeEEe-ccCCCchhhh
Q 009297 150 AGAILGEVFYRIAEKSKTHGFP-AGVCPTVGVGGHFSAGGYGNMMRKYGLSVDNIVDAKLVDVNGRILD-RNSMGEDLFW 227 (538)
Q Consensus 150 ~G~~~~~l~~~l~~~g~~l~~~-~G~~~~vgigG~~~gGg~g~~~~~~G~~~D~v~~~~vV~a~G~~~~-~~~~~~dLf~ 227 (538)
||+++.+|.++|.++| +.+| .+.++.++|||.+++|++|.. .+||..+|+|+++++|++||++++ ...+|+ ||
T Consensus 87 aG~~l~~l~~~l~~~G--l~l~~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~~--f~ 161 (422)
T 2vfr_A 87 GGVRYAELARVVHARG--LALPNMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVELVTADGSTVVIARGDER--FG 161 (422)
T ss_dssp TTCBHHHHHHHHHHTT--EECSCCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEEECTTSCEEEEETTSTT--GG
T ss_pred CCCCHHHHHHHHHHcC--CcccCCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEEEeCCCCEEEeCCCCCC--cc
Confidence 9999999999999999 4555 478888999999999999976 699999999999999999999995 334444 99
Q ss_pred hhhhccCccEEEEEEEEEEeecCceE
Q 009297 228 AIRGGGASFGVVLAYKINLVPVPETV 253 (538)
Q Consensus 228 a~rG~~g~~Givt~~~~~~~p~~~~~ 253 (538)
+++|+.|++||||+++||++|.++..
T Consensus 162 ~~~g~~G~lGvit~~~l~l~p~~~~~ 187 (422)
T 2vfr_A 162 GAVTSLGALGVVTSLTLDLEPAYEME 187 (422)
T ss_dssp GTSSCTTTTCEEEEEEEECEECCEEE
T ss_pred eEEecCCCCEEEEEEEEEEEecCceE
Confidence 99988799999999999999998754
No 21
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.96 E-value=9.5e-28 Score=261.93 Aligned_cols=200 Identities=19% Similarity=0.157 Sum_probs=162.0
Q ss_pred CCCCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEecCcCCC-CCccccCCCeEEEEe-cCcccE-EEcCCCCeEEEeCCc
Q 009297 76 STPKPVLIVAAMHESHVQAAIICAKKHNLQMKIRSGGHDYE-GLSYVSNVPFFILDM-FNLRSI-DVDIESETAWVQAGA 152 (538)
Q Consensus 76 ~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~-g~s~~~~~~g~vIdl-~~l~~i-~~d~~~~~v~v~~G~ 152 (538)
....|.+|++|+|++||+++|++|+++++|+++||+||++. |.+.....+|++||| ++||+| ++|+++.+++||||+
T Consensus 67 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~g~Gt~~~~gg~~p~~~~gvvidl~~~mn~il~id~~~~~v~v~aGv 146 (560)
T 1e8g_A 67 DYFLASAIVAPRNVADVQSIVGLANKFSFPLWPISIGRNSGYGGAAPRVSGSVVLDMGKNMNRVLEVNVEGAYCVVEPGV 146 (560)
T ss_dssp TSSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTCCSSTTCEEEECTTTCCCEEEEETTTTEEEECTTC
T ss_pred cccCCcEEEeCCCHHHHHHHHHHHHHcCCcEEEecCCCcCCcCCCCCCcCCEEEEEchHhcCCeEEEcCCCCEEEEeCCC
Confidence 34689999999999999999999999999999999999986 543211246899999 999999 999999999999999
Q ss_pred cHHHHHHHHHHhCCc--cccCCCCCCccccccccccCCcCCCccccCccccceeEEEEEecCCeEEeccC---CCc----
Q 009297 153 ILGEVFYRIAEKSKT--HGFPAGVCPTVGVGGHFSAGGYGNMMRKYGLSVDNIVDAKLVDVNGRILDRNS---MGE---- 223 (538)
Q Consensus 153 ~~~~l~~~l~~~g~~--l~~~~G~~~~vgigG~~~gGg~g~~~~~~G~~~D~v~~~~vV~a~G~~~~~~~---~~~---- 223 (538)
++.+|.++|.++|+. +.+.++.....||||.++++|.|.. +||..+|+|+++|||++||++++... .++
T Consensus 147 ~~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~~g~g~~--~yG~~~d~v~~l~vVl~dG~v~~~~~~~~~~~~~~~ 224 (560)
T 1e8g_A 147 TYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVERGVGYT--PYGDHWMMHSGMEVVLANGELLRTGMGALPDPKRPE 224 (560)
T ss_dssp BHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHTTCBCSS--TTCBTGGGEEEEEEEETTSCEEECGGGGSCCCCCGG
T ss_pred CHHHHHHHHHHcCCccccCCCCCCCCccchhhhccCCCCCcc--cceeHHHheeeeEEEeCCCCEEEecCcccCcccccc
Confidence 999999999999954 3322344446789999988888864 99999999999999999999995321 221
Q ss_pred -----------hhhhhhhhc-----------cCccEEEEEEEEEEeecCceEEEEEEecChhhHHHHHHHHHHHhh
Q 009297 224 -----------DLFWAIRGG-----------GASFGVVLAYKINLVPVPETVTVFKVEKTLEQDATDAVDKWQHVA 277 (538)
Q Consensus 224 -----------dLf~a~rG~-----------~g~~Givt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (538)
+++|+++++ +|+|||||+++||++|.|+....+.+.++..+.+.+++..++++.
T Consensus 225 ~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~a~~~~~~~~~~~ 300 (560)
T 1e8g_A 225 TMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIWLMPNPGGYQSYLITLPKDGDLKQAVDIIRPLR 300 (560)
T ss_dssp GTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEEEEECEECCSCEEEEEEEECSTTHHHHHHHHHHHHH
T ss_pred cccchhhhhhhhcccccccccCCcchhcccccCcEEEEEEEEEEEEeCCCceEEEEEEcCCHHHHHHHHHHHHHHH
Confidence 667777643 379999999999999999876666666765455556666666654
No 22
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.95 E-value=3.6e-28 Score=263.64 Aligned_cols=197 Identities=11% Similarity=0.105 Sum_probs=161.6
Q ss_pred CCCCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEecCcCCCCCccccCC----CeEEEEecCcccE-EEcCCCCeEEEeC
Q 009297 76 STPKPVLIVAAMHESHVQAAIICAKKHNLQMKIRSGGHDYEGLSYVSNV----PFFILDMFNLRSI-DVDIESETAWVQA 150 (538)
Q Consensus 76 ~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~~----~g~vIdl~~l~~i-~~d~~~~~v~v~~ 150 (538)
....|.+|++|+|++||+++|++|+++++|+.++||||++.|.+..... ++++|||++||+| ++|+ +++|+|||
T Consensus 42 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~GgGt~~~G~~~~~~~~~~r~gvvIdl~rmn~I~~id~-~~~v~v~a 120 (571)
T 1f0x_A 42 GQGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLGK-GEQVLAYP 120 (571)
T ss_dssp CBBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTSCCBSCCSSCEEEEECTTCCCEEEETT-TTEEEECT
T ss_pred cCCCccEEEeeCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCccCCCcCCcCceEEEECcccCCceeECC-CCeEEEcC
Confidence 3478999999999999999999999999999999999999887643321 3899999999999 7995 57999999
Q ss_pred CccHHHHHHHHHHhCCccccCC-CCCCccccccccccCCcCCCccccCcccc----------------ceeEEEEEecCC
Q 009297 151 GAILGEVFYRIAEKSKTHGFPA-GVCPTVGVGGHFSAGGYGNMMRKYGLSVD----------------NIVDAKLVDVNG 213 (538)
Q Consensus 151 G~~~~~l~~~l~~~g~~l~~~~-G~~~~vgigG~~~gGg~g~~~~~~G~~~D----------------~v~~~~vV~a~G 213 (538)
|+++.+|.++|.++|+.+.... ++|..++|||.++++++|..+.+||..+| +|++++||++||
T Consensus 121 Gv~l~~L~~~l~~~Gl~~p~~~g~s~~~~tvGG~ia~nagG~~~~~yG~~~d~~~~~~~~~~~~l~~~~vl~levVl~dG 200 (571)
T 1f0x_A 121 GTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGETPE 200 (571)
T ss_dssp TCBHHHHHHHHGGGTEECSCCCGGGGGTCBHHHHHHTTCCCSCTTSCSSCCSCEEEEEECTTSCEEEEECSSBCCCSSHH
T ss_pred CcCHHHHHHHHHhcCccCCcCCCccCCCceecccccCCCCcccccCCCchhhhhhhheeccCCceEEEEeeeEEEEcCCC
Confidence 9999999999999994221112 34556789999999999999999999999 999999999999
Q ss_pred eEEec------------------cCCCc-----------------hhhhhh--hhccCccEEEEEEEEEEeecCceEEEE
Q 009297 214 RILDR------------------NSMGE-----------------DLFWAI--RGGGASFGVVLAYKINLVPVPETVTVF 256 (538)
Q Consensus 214 ~~~~~------------------~~~~~-----------------dLf~a~--rG~~g~~Givt~~~~~~~p~~~~~~~~ 256 (538)
++++. ...++ ||+|++ +|+.|+||| |+++||++|.|+....+
T Consensus 201 ~i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~Dl~~l~~a~GseGtlGV-t~~tl~l~p~p~~~~~~ 279 (571)
T 1f0x_A 201 QILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCAGKLAV-FAVRLDTFEAEKNQQVF 279 (571)
T ss_dssp HHHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTTCGGGCCSSTTCTTSSEE-EEEEEECEECCSSCEEE
T ss_pred cEEEecCccccccchhhhcccccccCCcccccccccccccccccccHHHHHHhcCCCCceeE-EEEEEEEEecCCeEEEE
Confidence 98831 12223 988888 988899999 99999999999866556
Q ss_pred EEecChhhHHHHHHHHHH
Q 009297 257 KVEKTLEQDATDAVDKWQ 274 (538)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~ 274 (538)
.+.++..+.+.+++..+.
T Consensus 280 ~~~~~~~~~a~~~~~~~~ 297 (571)
T 1f0x_A 280 YIGTNQPEVLTEIRRHIL 297 (571)
T ss_dssp EEEESCHHHHHHHHHHHH
T ss_pred EEEeCCHHHHHHHHHHHH
Confidence 666654444445554444
No 23
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.92 E-value=4e-25 Score=223.66 Aligned_cols=163 Identities=17% Similarity=0.157 Sum_probs=128.7
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEecCcCCCCCccccCCCeEEEEecCcccEEEcCCCCeEEEeCCccHHH
Q 009297 77 TPKPVLIVAAMHESHVQAAIICAKKHNLQMKIRSGGHDYEGLSYVSNVPFFILDMFNLRSIDVDIESETAWVQAGAILGE 156 (538)
Q Consensus 77 ~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~~~g~vIdl~~l~~i~~d~~~~~v~v~~G~~~~~ 156 (538)
...|.+++.|+|++||+++|++|+++++|+.++|+|||+.+.. ...+|++|||++|++|++| +.+++||||++|.+
T Consensus 52 gg~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGsnl~~~~--~~~~gvvI~l~~~~~I~~d--~~~v~v~aG~~~~~ 127 (322)
T 3tx1_A 52 GGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIKD--GGIRGVILHLDLLQTIERN--NTQIVAMSGAKLID 127 (322)
T ss_dssp CCEEEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCTTEEECT--TCEEEEEEECTTCCCEEEE--TTEEEEETTSBHHH
T ss_pred CceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCccCCCcCC--CCCCeEEEECCCCCcEEEC--CCEEEEecCcCHHH
Confidence 4689999999999999999999999999999999999987542 2235899999999999885 35999999999999
Q ss_pred HHHHHHHhCCccccCCCCCCccccccccccCCcCCCcccc-CccccceeEEEEEecCCeEEeccCCCchhhhhhhhcc-C
Q 009297 157 VFYRIAEKSKTHGFPAGVCPTVGVGGHFSAGGYGNMMRKY-GLSVDNIVDAKLVDVNGRILDRNSMGEDLFWAIRGGG-A 234 (538)
Q Consensus 157 l~~~l~~~g~~l~~~~G~~~~vgigG~~~gGg~g~~~~~~-G~~~D~v~~~~vV~a~G~~~~~~~~~~dLf~a~rG~~-g 234 (538)
|++++.++| +. |.+...|++|.+ ||+..++.+.| |..+|+|++++||++||++++.. ++|++|++|++. +
T Consensus 128 l~~~l~~~G--l~---Gle~~~giPgTV-GGav~~NaGgyGg~~~d~v~~vevV~~~G~i~~~~--~~~~~~~yR~s~~g 199 (322)
T 3tx1_A 128 TAKFALNES--LS---GLEFACGIPGSI-GGALHMNAGAYGGEISDVLEAATVLTQTGELKKLK--RSELKAAYRFSTIA 199 (322)
T ss_dssp HHHHHHHTT--EE---SCGGGTTCCSBH-HHHHHHTCEETTEEHHHHEEEEEEECTTSCEEEEE--GGGCC--CC-CTTT
T ss_pred HHHHHHHcC--Cc---ccccCCCCcchh-HHHHHhCccCcccchHhhEEEEEEEcCCCCEEEec--hHHcCcchhhcccC
Confidence 999999999 42 333333333332 22233333335 68999999999999999999643 379999999886 4
Q ss_pred -ccEEEEEEEEEEeecCc
Q 009297 235 -SFGVVLAYKINLVPVPE 251 (538)
Q Consensus 235 -~~Givt~~~~~~~p~~~ 251 (538)
++||||+++||++|.|+
T Consensus 200 ~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 200 EKNYIVLDATFSLALEEK 217 (322)
T ss_dssp GGGCEEEEEEEECEECCH
T ss_pred CCCEEEEEEEEEEEeCCH
Confidence 68999999999999864
No 24
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.92 E-value=9.3e-25 Score=223.23 Aligned_cols=163 Identities=15% Similarity=0.059 Sum_probs=144.5
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEecCcCCCCCccccCCCeEEEEecCcccEEEcC--CCCeEEEeCCccH
Q 009297 77 TPKPVLIVAAMHESHVQAAIICAKKHNLQMKIRSGGHDYEGLSYVSNVPFFILDMFNLRSIDVDI--ESETAWVQAGAIL 154 (538)
Q Consensus 77 ~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~~~g~vIdl~~l~~i~~d~--~~~~v~v~~G~~~ 154 (538)
...|.+++.|+|++||+++|++|+++++|+.++|+|||..+.. . .+|+||+++ |++|+++. +..+++|+||++|
T Consensus 28 gg~a~~vv~p~s~eel~~~v~~a~~~~ipv~vlGgGSNll~~d--~-~~GvVI~l~-~~~i~v~~~~~~~~v~v~AG~~~ 103 (357)
T 3i99_A 28 EQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTC--H-YTGMIVVNR-LNGIEHQQDDDYHRLHVAGGEDW 103 (357)
T ss_dssp SCEEEEEEEECSHHHHHHHHSSSTTTTSCEEEESSCTTEEECS--C-EEEEEEEEC-CCCEEEEECSSEEEEEEETTSBH
T ss_pred CccceEEEEECCHHHHHHHHHHHHHcCCCEEEECCCcCcccCC--C-CCeEEEEcC-CCceEEeccCCceEEEEeCCCcH
Confidence 3578899999999999999999999999999999999987652 2 468999998 99998753 4568999999999
Q ss_pred HHHHHHHHHhCCccccCCCCCCccccccccccCCcCCCccccCc-cccceeEEEEEec-CCeEEeccCCCchhhhhhhhc
Q 009297 155 GEVFYRIAEKSKTHGFPAGVCPTVGVGGHFSAGGYGNMMRKYGL-SVDNIVDAKLVDV-NGRILDRNSMGEDLFWAIRGG 232 (538)
Q Consensus 155 ~~l~~~l~~~g~~l~~~~G~~~~vgigG~~~gGg~g~~~~~~G~-~~D~v~~~~vV~a-~G~~~~~~~~~~dLf~a~rG~ 232 (538)
.+|.+++.++| | .|.++.+||+|.+ ||+.+++.+.||. ++|+|+++++|++ ||++++.. +.|++|+||++
T Consensus 104 ~~l~~~a~~~G--l---~GlE~l~gIPGtV-GGav~~NaGaYG~e~~d~v~~vevv~~~~G~i~~~~--~~dl~f~YR~s 175 (357)
T 3i99_A 104 PSLVSWCVEQG--I---GGLENLALIPGCA-GSAPIQNIGAYGVEFKDVCDYVEYLCLETGTVKRLT--MEECQFGYRDS 175 (357)
T ss_dssp HHHHHHHHHTT--C---TTCGGGTTCCSBG-GGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGCCBTTBC
T ss_pred HHHHHHHHHcC--C---cCccccCCCCchh-HHHHHhchhhhhhhHHhhEeEEEEEECCCCcEEEEe--HHHcCcccccc
Confidence 99999999999 5 6899999999966 9999999999997 8999999999999 99999643 37999999987
Q ss_pred c-----CccEEEEEEEEEEeecCc
Q 009297 233 G-----ASFGVVLAYKINLVPVPE 251 (538)
Q Consensus 233 ~-----g~~Givt~~~~~~~p~~~ 251 (538)
. |++||||+++||++|.++
T Consensus 176 ~~~~~~g~~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 176 IFKHQLYQKAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp GGGTTTTTTEEEEEEEEEEESSCC
T ss_pred cCCCccCCCEEEEEEEEEEEeCCc
Confidence 5 279999999999999764
No 25
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.90 E-value=1.8e-23 Score=213.05 Aligned_cols=162 Identities=14% Similarity=0.066 Sum_probs=142.8
Q ss_pred CCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEecCcCCCCCccccCCCeEEEEecCcccEE-EcCCC-CeEEEeCCccHH
Q 009297 78 PKPVLIVAAMHESHVQAAIICAKKHNLQMKIRSGGHDYEGLSYVSNVPFFILDMFNLRSID-VDIES-ETAWVQAGAILG 155 (538)
Q Consensus 78 ~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~~~g~vIdl~~l~~i~-~d~~~-~~v~v~~G~~~~ 155 (538)
..|.+++.|+|++||+++|++|+++++|+.++|||||+.+.. . .+|+||+++ |++|. ++.++ .+++||||++|.
T Consensus 13 g~a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGSnll~~d--~-~~GvVI~l~-~~~i~~i~~~~~~~v~vgAG~~~~ 88 (340)
T 1uxy_A 13 HNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLE--D-YRGTVIINR-IKGIEIHDEPDAWYLHVGAGENWH 88 (340)
T ss_dssp CBEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEEECS--C-EEEEEEEEC-CCCEEEEECSSEEEEEEETTSBHH
T ss_pred ccccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCcCCcccC--C-CCeEEEEcc-CCCcEEEecCCCeEEEEecCCCHH
Confidence 578999999999999999999999999999999999988652 2 368999997 99985 56666 689999999999
Q ss_pred HHHHHHHHhCCccccCCCCCCccccccccccCCcCCCccccCc-cccceeEEEEEec-CCeEEeccCCCchhhhhhhhcc
Q 009297 156 EVFYRIAEKSKTHGFPAGVCPTVGVGGHFSAGGYGNMMRKYGL-SVDNIVDAKLVDV-NGRILDRNSMGEDLFWAIRGGG 233 (538)
Q Consensus 156 ~l~~~l~~~g~~l~~~~G~~~~vgigG~~~gGg~g~~~~~~G~-~~D~v~~~~vV~a-~G~~~~~~~~~~dLf~a~rG~~ 233 (538)
+|.+++.++| | .|.++.+||+|.+ ||+..++.+.||. ++|+|+++++|++ +|++++.. +.|++|++|++.
T Consensus 89 ~l~~~~~~~G--l---~Gle~~~gIPGtV-GGa~~~NaGayG~ei~d~v~~v~vv~~~~G~v~~~~--~~d~~~gYR~s~ 160 (340)
T 1uxy_A 89 RLVKYTLQEG--M---PGLENLALIPGCV-GSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLT--AKECRFGYRDSI 160 (340)
T ss_dssp HHHHHHHHTT--C---CSCGGGTTCCSBG-GGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGTCBTTBCG
T ss_pred HHHHHHHHCC--C---CccccccCCccch-hHHHHhccccchhhHHhheeEEEEEECCCCcEEEEe--HHHhccccCcCc
Confidence 9999999999 4 6888999999965 9999999999995 8999999999996 99998543 379999999874
Q ss_pred --C---ccEEEEEEEEEEeecCc
Q 009297 234 --A---SFGVVLAYKINLVPVPE 251 (538)
Q Consensus 234 --g---~~Givt~~~~~~~p~~~ 251 (538)
+ ++||||+++||++|.++
T Consensus 161 ~~~~~~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 161 FKHEYQDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp GGTTTTTTEEEEEEEEEEESSCC
T ss_pred cCCcCCCCEEEEEEEEEEEcCCC
Confidence 2 59999999999999753
No 26
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.90 E-value=5.1e-24 Score=216.91 Aligned_cols=161 Identities=19% Similarity=0.224 Sum_probs=128.7
Q ss_pred CCCCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEecCcCCCCCccccCCCeEEEEecCcccEEEcCCCCeEEEeCCccHH
Q 009297 76 STPKPVLIVAAMHESHVQAAIICAKKHNLQMKIRSGGHDYEGLSYVSNVPFFILDMFNLRSIDVDIESETAWVQAGAILG 155 (538)
Q Consensus 76 ~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~~~g~vIdl~~l~~i~~d~~~~~v~v~~G~~~~ 155 (538)
....|.++++|+|++||+++|++|+++++|+.++|||||+.+... ..+|++|||++||+|++|. .+++||||++|.
T Consensus 45 ~~~~p~~vv~P~s~eev~~~l~~a~~~~~pv~~~GgGtnl~~~~~--~~~gvvI~l~~m~~i~id~--~~v~v~aGv~~~ 120 (326)
T 1hsk_A 45 TGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREG--GIRGIVISLLSLDHIEVSD--DAIIAGSGAAII 120 (326)
T ss_dssp CCCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEECTT--CEEEEEEECTTCCCEEEET--TEEEEETTSBHH
T ss_pred cCCcceEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCccccCCC--CCCeEEEEeCCCCceEEcC--CEEEEeCCCcHH
Confidence 346799999999999999999999999999999999999876532 1258999999999998873 699999999999
Q ss_pred HHHHHHHHhCCc-cccCCCCCCccccccccccCCcCCCccccC-ccccceeEEEEEecCCeEEeccCCCchhhhhhhhcc
Q 009297 156 EVFYRIAEKSKT-HGFPAGVCPTVGVGGHFSAGGYGNMMRKYG-LSVDNIVDAKLVDVNGRILDRNSMGEDLFWAIRGGG 233 (538)
Q Consensus 156 ~l~~~l~~~g~~-l~~~~G~~~~vgigG~~~gGg~g~~~~~~G-~~~D~v~~~~vV~a~G~~~~~~~~~~dLf~a~rG~~ 233 (538)
+|.+++.++|+. +...++... +|||.+..++ +.|| .++|+|++++||++||++++... .|++|++|+..
T Consensus 121 ~l~~~l~~~Gl~gLe~~~~~Pg--tvGG~i~~na-----ggyG~~~~d~v~~v~vv~~~G~i~~~~~--~~~~~gyr~~~ 191 (326)
T 1hsk_A 121 DVSRVARDYALTGLEFACGIPG--SIGGAVYMNA-----GAYGGEVKDCIDYALCVNEQGSLIKLTT--KELELDYRNSI 191 (326)
T ss_dssp HHHHHHHHTTEESCGGGTTCCS--BHHHHHHHTC-----EETTEEHHHHEEEEEEECTTSCEEEEET--TTTTCBTTBCH
T ss_pred HHHHHHHHCCCccccccCCCcc--hhhHHHhccc-----ccCchhhhhhEEEEEEEeCCCCEEEECh--HHcCCCccccc
Confidence 999999999841 111122211 3566555444 3388 99999999999999999985433 48899999743
Q ss_pred --CccEEEEEEEEEEeec
Q 009297 234 --ASFGVVLAYKINLVPV 249 (538)
Q Consensus 234 --g~~Givt~~~~~~~p~ 249 (538)
+..||||+++||++|.
T Consensus 192 l~s~ggIIt~~~l~l~p~ 209 (326)
T 1hsk_A 192 IQKEHLVVLEAAFTLAPG 209 (326)
T ss_dssp HHHTTCEEEEEEEECEEC
T ss_pred cCCCCEEEEEEEEEEEcC
Confidence 1129999999999998
No 27
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.87 E-value=2.7e-22 Score=197.55 Aligned_cols=150 Identities=17% Similarity=0.210 Sum_probs=129.6
Q ss_pred CCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEecCcCCCCCccccCCC-eEEEEecCcccEEEcCCCCeEEEeCCccHHH
Q 009297 78 PKPVLIVAAMHESHVQAAIICAKKHNLQMKIRSGGHDYEGLSYVSNVP-FFILDMFNLRSIDVDIESETAWVQAGAILGE 156 (538)
Q Consensus 78 ~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~~~~~-g~vIdl~~l~~i~~d~~~~~v~v~~G~~~~~ 156 (538)
..|. ++.|+|++||+++| ++|+.++|+|||+.+.. .... |++|++++|++|++| . +|+||++|.+
T Consensus 21 g~a~-vv~p~s~edv~~~v------~ipv~v~GgGsnll~~d--~~~~~GvVI~l~~~~~I~vd--~---~v~aG~~~~~ 86 (268)
T 2gqt_A 21 GPAE-LWTVETREELKRAT------EAPYRVLGNGSNLLVLD--EGVPERVIRLAGEFQTYDLK--G---WVGAGTLLPL 86 (268)
T ss_dssp CEEE-EEEECSHHHHHHHT------TSCEEECSSSSSEEECT--TCCSSEEEEECGGGGCBCTT--S---EEETTSBHHH
T ss_pred cceE-EEEeCCHHHHHHHh------CCCeEEcCCCcCceecC--CCcCCeEEEEcCCCCCcEEc--C---EEECCCCHHH
Confidence 3466 99999999999999 89999999999988652 2223 899999999999865 2 9999999999
Q ss_pred HHHHHHHhCCccccCCCCCCccccccccccCCcCCCccccC-ccccceeEEEEEecCCeEEeccCCCchhhhhhhhcc-C
Q 009297 157 VFYRIAEKSKTHGFPAGVCPTVGVGGHFSAGGYGNMMRKYG-LSVDNIVDAKLVDVNGRILDRNSMGEDLFWAIRGGG-A 234 (538)
Q Consensus 157 l~~~l~~~g~~l~~~~G~~~~vgigG~~~gGg~g~~~~~~G-~~~D~v~~~~vV~a~G~~~~~~~~~~dLf~a~rG~~-g 234 (538)
|.+++.++| | .|.++.+||+|. .||+.+++.+.|| .++|+|+++++| +||++++... .|++|+||++. .
T Consensus 87 l~~~~~~~G--l---~Gle~~~giPGt-vGGav~~NaGayG~e~~d~v~~v~vv-~~G~v~~~~~--~~l~~~YR~s~~~ 157 (268)
T 2gqt_A 87 LVQEAARAG--L---SGLEGLLGIPAQ-VGGAVKMNAGTRFGEMADALEAVEVF-HDGAFHVYCP--EELGFGYRKSHLP 157 (268)
T ss_dssp HHHHHHHTT--E---ESCGGGTTCCCB-HHHHHHTTCEETTEEGGGGEEEEEEE-ETTEEEEECG--GGSCCBTTBCCCS
T ss_pred HHHHHHHcC--C---cCCccccCccch-hHHHHHhccccCchhHHhheeEEEEE-CCCcEEEEch--HHcccccCCCCcC
Confidence 999999999 5 588899999995 5999999999999 689999999999 9999996443 79999999876 2
Q ss_pred ccEEEEEEEEEEeecC
Q 009297 235 SFGVVLAYKINLVPVP 250 (538)
Q Consensus 235 ~~Givt~~~~~~~p~~ 250 (538)
.-||||+++||++|.+
T Consensus 158 ~~gIVt~~~~~L~~~~ 173 (268)
T 2gqt_A 158 PGGIVTRVRLKLKERP 173 (268)
T ss_dssp TTCEEEEEEECCEECC
T ss_pred CCceEEEEEEEEEeCC
Confidence 2259999999999974
No 28
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.79 E-value=2.6e-19 Score=171.29 Aligned_cols=117 Identities=21% Similarity=0.278 Sum_probs=98.7
Q ss_pred EEEcCCCCeEEEeCCccHHHHHHHHHHhCCccccCCCCCCccccccccccCCcCCCccccCccccceeEEEEEecCCeEE
Q 009297 137 IDVDIESETAWVQAGAILGEVFYRIAEKSKTHGFPAGVCPTVGVGGHFSAGGYGNMMRKYGLSVDNIVDAKLVDVNGRIL 216 (538)
Q Consensus 137 i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~G~~~~vgigG~~~gGg~g~~~~~~G~~~D~v~~~~vV~a~G~~~ 216 (538)
|++|+++++|+||+|+++.+|+++|.++|+.+...+|+++. +|||++++|++| ++||.. |+|++++||++||+++
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~~~Gl~~~~~Pg~~~~-tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG~i~ 75 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLAGTGLFPPFPPVELPG-GVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKGRRV 75 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHTTTTEECSSCSEECTT-HHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTSCEE
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHHHcCCEEeccCCCCCC-chhheeccCccc---ccCCCc-cEEEEEEEEeCCCCEE
Confidence 46889999999999999999999999999433222355666 999999999998 899999 9999999999999998
Q ss_pred ec-c-----CCCchhhhhhhhccCccEEEEEEEEEEeecCceEEEEEE
Q 009297 217 DR-N-----SMGEDLFWAIRGGGASFGVVLAYKINLVPVPETVTVFKV 258 (538)
Q Consensus 217 ~~-~-----~~~~dLf~a~rG~~g~~Givt~~~~~~~p~~~~~~~~~~ 258 (538)
+. . ..++||||+++|++|+|||||+++||++|.++....+.+
T Consensus 76 ~~~~~~~kn~~gydl~~~~~Gs~G~lGIVt~~tlrl~p~~~~~~~~~~ 123 (219)
T 2yvs_A 76 RAGGVVVKNVQGYDLVRLFVGSFGLLGRAEEVVLRLRPGRAQAFLRRP 123 (219)
T ss_dssp EEECSSCSSSSCSCHHHHHTTCTTTTCEEEEEEEECEECSEEEEEEEE
T ss_pred EECCccccCCCCcchHHHhccCCCceEEEEEEEEEEEECCcccEEEEE
Confidence 42 1 245899999998889999999999999999876544433
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=98.08 E-value=1.1e-05 Score=80.11 Aligned_cols=154 Identities=16% Similarity=0.148 Sum_probs=100.5
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEecCcCCCCC-ccccCCCeEEEEec---CcccEEEcCCCCeEEEeCCccH
Q 009297 79 KPVLIVAAMHESHVQAAIICAKKHNLQMKIRSGGHDYEGL-SYVSNVPFFILDMF---NLRSIDVDIESETAWVQAGAIL 154 (538)
Q Consensus 79 ~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~-s~~~~~~g~vIdl~---~l~~i~~d~~~~~v~v~~G~~~ 154 (538)
.|.-++.|+|.+|+.++++.. +.+..+.|||++.... .......+++||++ .|+.|+.+ ++.+++|+|+++
T Consensus 4 ~~~~~~~P~s~~ea~~ll~~~---~~~~~ilaGGT~ll~~~~~~~~~~~~lIdl~~i~eL~~i~~~--~~~l~iGA~~tl 78 (287)
T 1ffv_C 4 PRFEYHAPKSVGEAVALLGQL---GSDAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRGIREE--GSTVVIGAMTVE 78 (287)
T ss_dssp CCCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEEE--TTEEEEETTCBH
T ss_pred CcceEECCCCHHHHHHHHHhc---CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEec--CCEEEEccCCcH
Confidence 445689999999999988753 3579999999995421 00012357999998 47788764 457999999999
Q ss_pred HHHHHH-HHHhCCc-cc----cCCCC--CCccccccccccCCcCCCccccCcccccee-------EEEEEecCCeEEecc
Q 009297 155 GEVFYR-IAEKSKT-HG----FPAGV--CPTVGVGGHFSAGGYGNMMRKYGLSVDNIV-------DAKLVDVNGRILDRN 219 (538)
Q Consensus 155 ~~l~~~-l~~~g~~-l~----~~~G~--~~~vgigG~~~gGg~g~~~~~~G~~~D~v~-------~~~vV~a~G~~~~~~ 219 (538)
.++.+. +.+++.. |. ...|. -+..+|||.+..+.. ..|.+. .+++..++|+ ....
T Consensus 79 ~~l~~~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~---------~~D~~~~l~Al~A~v~~~~~~G~-r~i~ 148 (287)
T 1ffv_C 79 NDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDP---------GNDHPALSIAVEAHFVLEGPNGR-RTVP 148 (287)
T ss_dssp HHHHHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCT---------TCSHHHHHHHTTCEEEEEETTEE-EEEE
T ss_pred HHHhhChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCCC---------cHHHHHHHHHcCcEEEEEcCCce-EEEE
Confidence 999962 3333321 11 01121 123468888866531 345443 5888889983 3322
Q ss_pred CCCchhhhhhhhcc-CccEEEEEEEEEEeec
Q 009297 220 SMGEDLFWAIRGGG-ASFGVVLAYKINLVPV 249 (538)
Q Consensus 220 ~~~~dLf~a~rG~~-g~~Givt~~~~~~~p~ 249 (538)
. .|+|+++|-.. ..--|||+++|...+.
T Consensus 149 ~--~df~~g~~~t~l~~~eii~~i~ip~~~~ 177 (287)
T 1ffv_C 149 A--DGFFLGTYMTLLEENEVMVEIRVPAFAQ 177 (287)
T ss_dssp S--TTTEEETTEESCCTTCEEEEEEEECCCT
T ss_pred H--HHHhcCcccccCCCCCEEEEEEecCCCC
Confidence 2 68888887444 3346999999987653
No 30
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=97.27 E-value=0.00041 Score=68.69 Aligned_cols=153 Identities=15% Similarity=0.088 Sum_probs=94.3
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEecCcCCCCC-ccccCCCeEEEEecC---cccEEEcCCCCeEEEeCCccH
Q 009297 79 KPVLIVAAMHESHVQAAIICAKKHNLQMKIRSGGHDYEGL-SYVSNVPFFILDMFN---LRSIDVDIESETAWVQAGAIL 154 (538)
Q Consensus 79 ~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~-s~~~~~~g~vIdl~~---l~~i~~d~~~~~v~v~~G~~~ 154 (538)
.+.-++.|+|.+|+.++++.. +-+..+.+|||+..-. .......+.+||+++ |+.|+. +++.+++|+++++
T Consensus 4 ~~~~~~~P~sl~ea~~ll~~~---~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~~t~ 78 (288)
T 1n62_C 4 GSFDYHRPKSIADAVALLTKL---GEDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIRE--EGTDVVIGAMTTQ 78 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSCEEE--ETTEEEEETTCBH
T ss_pred CceEEECcCCHHHHHHHHHhc---CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEe--cCCEEEEccCCcH
Confidence 445689999999998887533 3468899999995421 000123469999986 567765 4458999999999
Q ss_pred HHHHH--HHHHhCCccc--c--CCC--CCCccccccccccCCcCCCccccCcccccee-------EEEEEecCCeEEecc
Q 009297 155 GEVFY--RIAEKSKTHG--F--PAG--VCPTVGVGGHFSAGGYGNMMRKYGLSVDNIV-------DAKLVDVNGRILDRN 219 (538)
Q Consensus 155 ~~l~~--~l~~~g~~l~--~--~~G--~~~~vgigG~~~gGg~g~~~~~~G~~~D~v~-------~~~vV~a~G~~~~~~ 219 (538)
.++.+ .+.++-..|. + .++ .-+..+|||.+..+. -.+|.+. .+++..++|+.. ..
T Consensus 79 ~~l~~~~~~~~~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~---------p~sD~~~~L~Al~A~v~l~~~~G~r~-v~ 148 (288)
T 1n62_C 79 HALIGSDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAANGD---------PGNDMPALMQCLGAAYELTGPEGARI-VA 148 (288)
T ss_dssp HHHHHCHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCC---------TTCSHHHHHHHHTCEEEEEETTEEEE-EE
T ss_pred HHHhcChHHHHHHHHHHHHHHHhCCHHHHccccccchhccCC---------CchHHHHHHHHhCcEEEEEeCCccEE-EE
Confidence 99984 4443211111 0 011 112346888886652 1355543 566777888422 22
Q ss_pred CCCchhhhhhhhcc-CccEEEEEEEEEEee
Q 009297 220 SMGEDLFWAIRGGG-ASFGVVLAYKINLVP 248 (538)
Q Consensus 220 ~~~~dLf~a~rG~~-g~~Givt~~~~~~~p 248 (538)
- .|+|.+++-.. ..--|||+++|...+
T Consensus 149 ~--~df~~g~~~t~l~~~eil~~i~ip~~~ 176 (288)
T 1n62_C 149 A--RDYYQGAYFTAIEPGELLTAIRIPVPP 176 (288)
T ss_dssp H--HHHEEETTEESCCTTCEEEEEEEECCC
T ss_pred H--HHHhcCcccccCCCCCEEEEEEeCCCC
Confidence 2 46666655322 334689999987554
No 31
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=96.94 E-value=0.00076 Score=71.09 Aligned_cols=151 Identities=13% Similarity=0.035 Sum_probs=97.4
Q ss_pred EEEEcCCHHHHHHHHHHHHhCCCcEEEEecCcCCCCCccc-cCCCeEEEEecC---cccEEEcCCCCeEEEeCCccHHHH
Q 009297 82 LIVAAMHESHVQAAIICAKKHNLQMKIRSGGHDYEGLSYV-SNVPFFILDMFN---LRSIDVDIESETAWVQAGAILGEV 157 (538)
Q Consensus 82 ~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~~-~~~~g~vIdl~~---l~~i~~d~~~~~v~v~~G~~~~~l 157 (538)
.++.|+|.+|+.++++.. . +..+.+||++....-.. ....+.+||+++ |+.|+.+ ++.+++|+|+++.++
T Consensus 179 ~y~~P~sl~ea~~ll~~~---~-~a~ilaGGT~L~~~~k~~~~~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~vtl~~l 252 (462)
T 2w3s_A 179 PAFLPETSDALADWYLAH---P-EATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRET--PDGYGIGAGVTIAAL 252 (462)
T ss_dssp CCBCCSSHHHHHHHHHHC---T-TCEEESSCTTTTHHHHTSCCCCCSEEECTTCGGGSCEEEE--TTEEEEETTCBHHHH
T ss_pred EEEecCCHHHHHHHHhhC---C-CCEEEeCCchhhhhhhccCCCCCEEEEcCCChhhCcEEEc--CCEEEEccCCcHHHH
Confidence 367899999998887653 2 57889999997632100 113468999988 6788765 347999999999999
Q ss_pred HHHHHHhCCc-c----ccCCCC--CCccccccccccCCcCCCccccCcccccee----EEEEEecCCeEEeccCCCchhh
Q 009297 158 FYRIAEKSKT-H----GFPAGV--CPTVGVGGHFSAGGYGNMMRKYGLSVDNIV----DAKLVDVNGRILDRNSMGEDLF 226 (538)
Q Consensus 158 ~~~l~~~g~~-l----~~~~G~--~~~vgigG~~~gGg~g~~~~~~G~~~D~v~----~~~vV~a~G~~~~~~~~~~dLf 226 (538)
.+.+. +..+ | ....+. -+..+|||.+..+.+ .+-...-++ .+++..++|+ .... -.|+|
T Consensus 253 ~~~l~-~~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp------~sD~~~~L~ALdA~v~l~~~~G~-R~vp--~~dF~ 322 (462)
T 2w3s_A 253 RAFAE-GPHPALAGLLRRFASEQVRQVATIGGNIANGSP------IGDGPPALIAMGASLTLRRGQER-RRMP--LEDFF 322 (462)
T ss_dssp HHHHT-TTCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCT------TCSHHHHHHHTTCEEEEEBTTBC-CCCB--GGGGE
T ss_pred HHHHH-HHhHHHHHHHHHhCChhheeeEEcccccccCCC------cchHHHHHHHcCCEEEEEeCCce-EEEE--HHHhh
Confidence 98743 3321 1 001111 123568888877653 244455566 7778888883 2222 26788
Q ss_pred hhhhhcc-CccEEEEEEEEEEee
Q 009297 227 WAIRGGG-ASFGVVLAYKINLVP 248 (538)
Q Consensus 227 ~a~rG~~-g~~Givt~~~~~~~p 248 (538)
..+|-.. ..--||++++|...+
T Consensus 323 ~g~~~t~L~~~Eii~~i~iP~~~ 345 (462)
T 2w3s_A 323 LEYRKQDRRPGEFVESVTLPKSA 345 (462)
T ss_dssp EETTEESCCTTCEEEEEEEESCC
T ss_pred cccccccCCCCcEEEEEEEecCC
Confidence 7776433 333699999986544
No 32
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=95.77 E-value=0.016 Score=57.16 Aligned_cols=152 Identities=14% Similarity=0.027 Sum_probs=90.4
Q ss_pred CCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEecCcCCCCCcc-ccCCCeEEEEecC---cccEEEcCCCCeEEEeCCcc
Q 009297 78 PKPVLIVAAMHESHVQAAIICAKKHNLQMKIRSGGHDYEGLSY-VSNVPFFILDMFN---LRSIDVDIESETAWVQAGAI 153 (538)
Q Consensus 78 ~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~-~~~~~g~vIdl~~---l~~i~~d~~~~~v~v~~G~~ 153 (538)
+.|--+++|+|.+|+.++++. +-...+.+||++..-.-. .......+||+++ |+.|+. +++.+++|++++
T Consensus 3 ~~~f~y~~P~sl~ea~~ll~~----~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt 76 (288)
T 1t3q_C 3 FPAFSYRAPASLQEVIQVLAD----DPDARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFEISQ--SAGILSVGAMVT 76 (288)
T ss_dssp CCCCEEECCSSHHHHHHHHHH----CTTCEEESSCTTHHHHHHTTCCCCSEEEECTTCGGGGCEEE--ETTEEEEETTCB
T ss_pred CCCceEECCCCHHHHHHHHhh----CCCCEEEeCchhHHHHHhcCCCCCCEEEECCCChhhcCeEE--cCCEEEEcCCCc
Confidence 345568999999999887753 234677899999431100 0122458999997 566765 456899999999
Q ss_pred HHHHHH--HHHHhCCccc-----cCC-CCCCccccccccccCCcCCCccccCcccccee-------EEEEEecCCeEEec
Q 009297 154 LGEVFY--RIAEKSKTHG-----FPA-GVCPTVGVGGHFSAGGYGNMMRKYGLSVDNIV-------DAKLVDVNGRILDR 218 (538)
Q Consensus 154 ~~~l~~--~l~~~g~~l~-----~~~-G~~~~vgigG~~~gGg~g~~~~~~G~~~D~v~-------~~~vV~a~G~~~~~ 218 (538)
+.++.+ .+.++-..|. +.+ -.-+..++||.+..+- -.+|... .+++..++|+.. .
T Consensus 77 ~~~l~~~~~~~~~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~---------p~sD~~~~L~Al~A~v~l~~~~g~R~-v 146 (288)
T 1t3q_C 77 HFRNKTDPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHAD---------AGAEMPFLMATLGATMYIASSAGVRS-V 146 (288)
T ss_dssp HHHHHHCHHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTC---------TTCHHHHHHHHTTCEEEEEETTEEEE-E
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHhCCHHHHcceechhhcccCC---------CcHHHHHHHHHcCcEEEEEcCCceEE-E
Confidence 999986 3433221111 111 1113347888886441 1356554 667777777533 1
Q ss_pred cCCCchhhhhhhhcc-CccEEEEEEEEEEe
Q 009297 219 NSMGEDLFWAIRGGG-ASFGVVLAYKINLV 247 (538)
Q Consensus 219 ~~~~~dLf~a~rG~~-g~~Givt~~~~~~~ 247 (538)
.- .|.|.+.+--. ..--|||++.+...
T Consensus 147 p~--~dF~~g~~~t~L~~~Eil~~I~iP~~ 174 (288)
T 1t3q_C 147 SA--TDFMKGHYFTDLEAGEVLVRVEIPIP 174 (288)
T ss_dssp EH--HHHEEETTEESCCTTCEEEEEEEECC
T ss_pred EH--HHHhcCcccccCCCCCEEEEEEecCC
Confidence 21 45554443212 23368999988543
No 33
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=95.65 E-value=0.022 Score=56.70 Aligned_cols=152 Identities=16% Similarity=0.073 Sum_probs=89.8
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEecCcCCCCCcc-ccCCCeEEEEecC---cccEEEcCCCCeEEEeCCccH
Q 009297 79 KPVLIVAAMHESHVQAAIICAKKHNLQMKIRSGGHDYEGLSY-VSNVPFFILDMFN---LRSIDVDIESETAWVQAGAIL 154 (538)
Q Consensus 79 ~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~-~~~~~g~vIdl~~---l~~i~~d~~~~~v~v~~G~~~ 154 (538)
.+..+++|+|.+|..++++. +. ...+.+||++....-. .......+||+++ |+.|+. +++.+++|+++++
T Consensus 9 ~~~~y~~P~sl~ea~~ll~~---~~-~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt~ 82 (305)
T 3nvz_B 9 ERVTWIQASTLKELLDLKAQ---HP-EAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEH--GPEGISFGAACAL 82 (305)
T ss_dssp SSCEEEECCSHHHHHHHHHH---CT-TCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEE--CSSEEEEETTCBH
T ss_pred CCeEEEccCCHHHHHHHHHh---CC-CCEEEECccHHHHHHhcCCCCCCEEEECCCChhhcceEE--CCCeEEEccCCcH
Confidence 45578999999999887643 22 3578899999642100 0122468999996 556665 4568999999999
Q ss_pred HHHHHHHHHh-------C---C-ccc--cC--CC--CCCccccccccccCCcCCCccccCccccce---e----EEEEEe
Q 009297 155 GEVFYRIAEK-------S---K-THG--FP--AG--VCPTVGVGGHFSAGGYGNMMRKYGLSVDNI---V----DAKLVD 210 (538)
Q Consensus 155 ~~l~~~l~~~-------g---~-~l~--~~--~G--~~~~vgigG~~~gGg~g~~~~~~G~~~D~v---~----~~~vV~ 210 (538)
.++.+.+.++ . . .|. +. ++ .-+..+|||.+..+-. .+|.. + .+++..
T Consensus 83 ~~l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~p---------~sD~~~~L~AldA~v~l~~ 153 (305)
T 3nvz_B 83 SSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASP---------ISDLNPVFMASGTKLTIVS 153 (305)
T ss_dssp HHHHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCCT---------TCSSHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCCC---------chHHHHHHHHcCCEEEEEc
Confidence 9998876532 0 0 010 00 11 1134568888866532 23432 2 566777
Q ss_pred cCCeEEeccCCCchhhhhhhhcc-CccEEEEEEEEEEe
Q 009297 211 VNGRILDRNSMGEDLFWAIRGGG-ASFGVVLAYKINLV 247 (538)
Q Consensus 211 a~G~~~~~~~~~~dLf~a~rG~~-g~~Givt~~~~~~~ 247 (538)
++|+-. ..- ..|.|-+++--. ..--|||++.+...
T Consensus 154 ~~G~R~-vp~-~~df~~g~~~t~l~~~Eil~~I~iP~~ 189 (305)
T 3nvz_B 154 RGTRRT-VPM-DHTFFPSYRKTLLGPEEILLSIEIPYS 189 (305)
T ss_dssp TTEEEE-EEC-CGGGCCSTTCCSCCTTCEEEEEEEECC
T ss_pred CCCcEE-EEe-ehHhhcCcccccCCCCcEEEEEEecCC
Confidence 788532 121 125665544222 22259999988543
No 34
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=90.28 E-value=0.28 Score=48.40 Aligned_cols=75 Identities=17% Similarity=0.104 Sum_probs=52.2
Q ss_pred ccEEEEcCCHHHHHHHHHHHHhCCC-cEEEEecCcCCCCCcc-ccCCCeEEEEecCc---ccEEEcCCCCeEEEeCCccH
Q 009297 80 PVLIVAAMHESHVQAAIICAKKHNL-QMKIRSGGHDYEGLSY-VSNVPFFILDMFNL---RSIDVDIESETAWVQAGAIL 154 (538)
Q Consensus 80 p~~vv~p~s~~dv~~~v~~a~~~~~-~~~~~ggGh~~~g~s~-~~~~~g~vIdl~~l---~~i~~d~~~~~v~v~~G~~~ 154 (538)
|--+++|+|.+|..++++ +++- ...+.+||++....-. .......+||++++ +.|+. +++.+++|+++++
T Consensus 3 ~f~y~~P~sl~ea~~ll~---~~~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt~ 77 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLH---QYKDVPPAIIAGGTDLVIEINDRWEKPDVVIDIKKLKELEYIRV--EENTIHIGALSTF 77 (296)
T ss_dssp CCEEECCSSHHHHHHHHH---HTTTSCCEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEE--CSSEEEEETTCBH
T ss_pred ceeEeCCCCHHHHHHHHH---hCCCCCeEEEECCcHHHHHhhcCCCCCCeEEEcccChhhcceEE--cCCeEEEccCCcH
Confidence 345789999999877653 3432 4678899999642100 01134689999976 55654 4579999999999
Q ss_pred HHHHH
Q 009297 155 GEVFY 159 (538)
Q Consensus 155 ~~l~~ 159 (538)
.++.+
T Consensus 78 ~~l~~ 82 (296)
T 3hrd_C 78 TQIEN 82 (296)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99874
No 35
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=89.88 E-value=0.21 Score=51.81 Aligned_cols=23 Identities=17% Similarity=0.372 Sum_probs=20.6
Q ss_pred ccccHHHHHHhhcccCCCCCCCCC
Q 009297 502 FLENFDRLVEIKTKVDPDNFFRNE 525 (538)
Q Consensus 502 yg~n~~RL~~IK~kYDP~~vF~~~ 525 (538)
|+ +++++++||++|||+++|++.
T Consensus 392 Yp-~~~~f~~vk~~~DP~g~f~n~ 414 (422)
T 2vfr_A 392 YP-RLADFGALAGALDPAGKFTNA 414 (422)
T ss_dssp CT-THHHHHHHHHHHCTTCTTCCH
T ss_pred Cc-CHHHHHHHHHHhCCCCccCCH
Confidence 45 799999999999999999864
No 36
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=83.61 E-value=1.1 Score=47.63 Aligned_cols=33 Identities=21% Similarity=0.071 Sum_probs=24.4
Q ss_pred hhhhhcccc-HHHHHHhhcccCCCCCCCCCCCCC
Q 009297 497 YGINYFLEN-FDRLVEIKTKVDPDNFFRNEQSIP 529 (538)
Q Consensus 497 ~~~~yyg~n-~~RL~~IK~kYDP~~vF~~~q~I~ 529 (538)
|...+||++ ++-+++||+.+||+|+|+-..-+.
T Consensus 481 ~~~~~~g~~~~~lmr~IK~a~DP~~IlNPGki~~ 514 (520)
T 1wvf_A 481 RVAQSYGPVKRKLEHAIKRAVDPNNILAPGRSGI 514 (520)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTCCBCTTGGGC
T ss_pred hhhhhcCHHHHHHHHHHHHHcCCCCCCCCCcCCC
Confidence 336777765 555599999999999997554443
No 37
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=83.24 E-value=2.1 Score=42.61 Aligned_cols=76 Identities=13% Similarity=0.035 Sum_probs=52.9
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEecCcCCCCCc-cccCCCeEEEEecCc---ccEEEcCCCCeEEEeCCccH
Q 009297 79 KPVLIVAAMHESHVQAAIICAKKHNLQMKIRSGGHDYEGLS-YVSNVPFFILDMFNL---RSIDVDIESETAWVQAGAIL 154 (538)
Q Consensus 79 ~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s-~~~~~~g~vIdl~~l---~~i~~d~~~~~v~v~~G~~~ 154 (538)
.|--+++|+|.+|..++++ + -.-.+.+||+++...- ........+||++++ +.|+.++ ++.+++|+++++
T Consensus 5 ~~f~y~~P~sl~ea~~ll~---~--~~a~~lAGGT~l~~~~k~~~~~p~~lIdi~~i~eL~~I~~~~-~~~l~IGA~vt~ 78 (324)
T 1rm6_B 5 TDFRTHRPATLADAVNALA---A--EATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLA-DGSLRIGAGATL 78 (324)
T ss_dssp CCCEEECCSSHHHHHHHTT---S--TTEEEESSCTTHHHHHHTTSCCCSEEEECTTSTTTTCEEECT-TSCEEEETTCBH
T ss_pred CceEEEccCCHHHHHHHHh---C--CCCEEEECchhHHHHHhccCCCCCEEEECCCChhhcceEECC-CCeEEEccCCcH
Confidence 3445889999999887765 2 2478889999963210 001234689999876 5666543 347999999999
Q ss_pred HHHHHH
Q 009297 155 GEVFYR 160 (538)
Q Consensus 155 ~~l~~~ 160 (538)
.++.+.
T Consensus 79 ~~l~~~ 84 (324)
T 1rm6_B 79 EAIAEH 84 (324)
T ss_dssp HHHHHC
T ss_pred HHHHhC
Confidence 998764
No 38
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=71.10 E-value=1.5 Score=48.20 Aligned_cols=29 Identities=31% Similarity=0.470 Sum_probs=23.8
Q ss_pred chhhhhccc-cHHHHHHhhcccCCCCCCCC
Q 009297 496 AYGINYFLE-NFDRLVEIKTKVDPDNFFRN 524 (538)
Q Consensus 496 ~~~~~yyg~-n~~RL~~IK~kYDP~~vF~~ 524 (538)
.|-..+||+ .++.|++||+.+||+|+|+-
T Consensus 625 ~~l~~~~g~~~l~lmr~IK~a~DP~gILNP 654 (658)
T 4bby_A 625 QWLKESISDVGFGMLKSVKDYVDPTNIFGN 654 (658)
T ss_dssp GGHHHHHCHHHHHHHHHHHHHHSTTCSSCS
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCcccCCCC
Confidence 365566664 79999999999999999964
No 39
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=64.21 E-value=5.9 Score=46.94 Aligned_cols=78 Identities=13% Similarity=0.016 Sum_probs=53.7
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEecCcCCCCCcc-ccCCCeEEEEecCc---ccEEEcCCCCeEEEeCCccH
Q 009297 79 KPVLIVAAMHESHVQAAIICAKKHNLQMKIRSGGHDYEGLSY-VSNVPFFILDMFNL---RSIDVDIESETAWVQAGAIL 154 (538)
Q Consensus 79 ~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~s~-~~~~~g~vIdl~~l---~~i~~d~~~~~v~v~~G~~~ 154 (538)
.+.-.++|.|.+|+.++++. + -.-.+.+||++..-.-. .......+||++++ +.|+.+ ++.+++||++++
T Consensus 232 ~~~~~~~P~sl~ea~~ll~~---~-~~a~lvaGgT~l~~~~k~~~~~~~~lIdl~~i~EL~~I~~~--~~~l~IGA~vtl 305 (1332)
T 3unc_A 232 ERVTWIQASTLKELLDLKAQ---H-PEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHG--PEGISFGAACAL 305 (1332)
T ss_dssp SSCEEEECCSHHHHHHHHHH---C-TTCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEEC--SSEEEEETTCBH
T ss_pred CceEEEccCCHHHHHHHHhh---C-CCCEEEEeCcHHHHHhhcCCCCCCeEEEcCCCHHhCceEEe--CCEEEEEecChH
Confidence 34568999999999876643 2 12467789988542100 01123579999975 566654 567999999999
Q ss_pred HHHHHHHH
Q 009297 155 GEVFYRIA 162 (538)
Q Consensus 155 ~~l~~~l~ 162 (538)
.++.+.+.
T Consensus 306 ~~l~~~l~ 313 (1332)
T 3unc_A 306 SSVEKTLL 313 (1332)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988764
No 40
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=49.73 E-value=14 Score=38.71 Aligned_cols=29 Identities=14% Similarity=0.106 Sum_probs=23.9
Q ss_pred chhhhhcc-ccHHHHHHhhcccCCCCCCCC
Q 009297 496 AYGINYFL-ENFDRLVEIKTKVDPDNFFRN 524 (538)
Q Consensus 496 ~~~~~yyg-~n~~RL~~IK~kYDP~~vF~~ 524 (538)
.|-...+| +.++-+++||+.+||+|+++-
T Consensus 443 ~~l~~~~~~~~~~~m~~iK~~~DP~~ilNP 472 (476)
T 3pm9_A 443 DELAEVKDKTAIELMRSIKALLDPHGIMNP 472 (476)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHCTTSCBST
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCcccCCCC
Confidence 46566666 479999999999999999963
No 41
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=49.70 E-value=22 Score=37.96 Aligned_cols=25 Identities=20% Similarity=0.163 Sum_probs=20.4
Q ss_pred ccHHHHHHhhcccCCCCCCCCCCCC
Q 009297 504 ENFDRLVEIKTKVDPDNFFRNEQSI 528 (538)
Q Consensus 504 ~n~~RL~~IK~kYDP~~vF~~~q~I 528 (538)
..++-+++||+.+||+|+|+-..-+
T Consensus 523 ~~~~lm~~iK~~~DP~gILNPGk~~ 547 (560)
T 1e8g_A 523 SFLRFNEVLKNAVDPNGIIAPGKSG 547 (560)
T ss_dssp HHHHHHHHHHHHHCTTCCBCTTGGG
T ss_pred HHHHHHHHHHHHcCccCCCCCCccc
Confidence 3688899999999999999765443
No 42
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=45.13 E-value=8.5 Score=41.24 Aligned_cols=22 Identities=32% Similarity=0.543 Sum_probs=20.5
Q ss_pred ccHHHHHHhhcccCCCCCCCCC
Q 009297 504 ENFDRLVEIKTKVDPDNFFRNE 525 (538)
Q Consensus 504 ~n~~RL~~IK~kYDP~~vF~~~ 525 (538)
.++++.+++++++||+++|.+.
T Consensus 533 p~~~~f~~~r~~~DP~g~F~n~ 554 (561)
T 2i0k_A 533 ENWDTARARYNQIDPHRVFTNG 554 (561)
T ss_dssp SSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCHHHHHHHHHhcCCCCccCCH
Confidence 7999999999999999999865
No 43
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=41.44 E-value=9.2 Score=40.10 Aligned_cols=27 Identities=26% Similarity=0.581 Sum_probs=22.2
Q ss_pred hhhhhccccHHHHHHhhcccCCCCCCCCC
Q 009297 497 YGINYFLENFDRLVEIKTKVDPDNFFRNE 525 (538)
Q Consensus 497 ~~~~yyg~n~~RL~~IK~kYDP~~vF~~~ 525 (538)
+...| .++++.+++|+++||+++|.+.
T Consensus 447 ~~~~Y--P~~~~F~~lr~~~DP~g~F~n~ 473 (481)
T 4feh_A 447 FHAMY--PRVDEWISVRRKVDPLRVFASD 473 (481)
T ss_dssp HHHHC--TTHHHHHHHHHHHCTTCCBCCH
T ss_pred HHHhC--cCHHHHHHHHHhhCCccccCCH
Confidence 44444 6899999999999999999864
No 44
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=38.48 E-value=54 Score=27.17 Aligned_cols=37 Identities=22% Similarity=0.267 Sum_probs=32.2
Q ss_pred CCccEEEEcCCHHHHHHHHHHHHhCCCcE-EEEecCcC
Q 009297 78 PKPVLIVAAMHESHVQAAIICAKKHNLQM-KIRSGGHD 114 (538)
Q Consensus 78 ~~p~~vv~p~s~~dv~~~v~~a~~~~~~~-~~~ggGh~ 114 (538)
..|.+|+.+.+++++.++.+.|++.|+|. .++=.|+.
T Consensus 53 g~~KiVlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 90 (120)
T 1xty_A 53 GQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAGKT 90 (120)
T ss_dssp TCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCSSS
T ss_pred CCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 68999999999999999999999999996 56666663
No 45
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=38.36 E-value=16 Score=39.12 Aligned_cols=29 Identities=14% Similarity=0.077 Sum_probs=22.2
Q ss_pred ccccHHHHHHhhcccCCCCCCCCCCCCCCC
Q 009297 502 FLENFDRLVEIKTKVDPDNFFRNEQSIPVL 531 (538)
Q Consensus 502 yg~n~~RL~~IK~kYDP~~vF~~~q~I~~~ 531 (538)
|++... |++||+.+||+|+|+-..-+.|.
T Consensus 535 ~~~~~~-m~~iK~~~DP~~ilNPGk~~t~~ 563 (571)
T 1f0x_A 535 YKAPET-LQKFYRENDPTNSMNPGIGKTSK 563 (571)
T ss_dssp SCCCHH-HHHHHHHHCTTCCBSTTTTTCCC
T ss_pred cCCHHH-HHHHHHHhCCCCCCCCCcCcCCc
Confidence 344444 99999999999999876655553
No 46
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=30.04 E-value=21 Score=37.88 Aligned_cols=23 Identities=22% Similarity=0.329 Sum_probs=21.0
Q ss_pred cccHHHHHHhhcccCCCCCCCCC
Q 009297 503 LENFDRLVEIKTKVDPDNFFRNE 525 (538)
Q Consensus 503 g~n~~RL~~IK~kYDP~~vF~~~ 525 (538)
|+|++.-+++++++||+++|.++
T Consensus 511 ~~~~~~~~~~~~~~DP~~~F~n~ 533 (540)
T 3js8_A 511 AANWDAAKAALAAYDPYRLFSSP 533 (540)
T ss_dssp GGSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCCHHHHHHHHHhcCCCcccCCH
Confidence 58999999999999999999864
No 47
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=29.97 E-value=35 Score=40.46 Aligned_cols=77 Identities=9% Similarity=-0.036 Sum_probs=48.9
Q ss_pred EEEEcCCHHHHHHHHHHHHhCCCcEEEEecCcCCC--CCccccCCCeEEEEecCcccE-EEcCCCCeEEEeCCccHHHHH
Q 009297 82 LIVAAMHESHVQAAIICAKKHNLQMKIRSGGHDYE--GLSYVSNVPFFILDMFNLRSI-DVDIESETAWVQAGAILGEVF 158 (538)
Q Consensus 82 ~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~--g~s~~~~~~g~vIdl~~l~~i-~~d~~~~~v~v~~G~~~~~l~ 158 (538)
..+.|.|.+|+.++..- .-+.++ ..|++... -.. ......++||+.+.... .+..++..+++|+++++.++.
T Consensus 242 ~w~~P~tl~el~~l~~~--~p~a~l--vaGnT~~gl~~~~-~~~~~~~~I~~~~v~EL~~i~~~~~~l~IGA~vtls~~~ 316 (1335)
T 3zyv_A 242 TWIAPGTLNDLLELKMK--HPSAPL--VIGNTYLGLHMKF-TDVSYPIIISPARILELFVVTNTKQGLTLGTGLSLTQVK 316 (1335)
T ss_dssp EEEECSSHHHHHHHHHH--CTTSCB--CSSCTTHHHHHC---CCCCSEEECCTTCGGGSCEECCTTEEEEETTCBHHHHH
T ss_pred eEecCCCHHHHHHHHHH--CCCCeE--EEecccceeeEee-cCCCCCeEEEcCcchhHheEEecCCEEEEcccCcHHHHH
Confidence 47899999999886432 123344 44555522 110 01123588998865544 344556789999999999998
Q ss_pred HHHHH
Q 009297 159 YRIAE 163 (538)
Q Consensus 159 ~~l~~ 163 (538)
+.|.+
T Consensus 317 ~~l~~ 321 (1335)
T 3zyv_A 317 NVLSD 321 (1335)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87764
No 48
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=28.68 E-value=91 Score=25.83 Aligned_cols=37 Identities=22% Similarity=0.169 Sum_probs=32.1
Q ss_pred CCccEEEEcCCHHHHHHHHHHHHhCCCcE-EEEecCcC
Q 009297 78 PKPVLIVAAMHESHVQAAIICAKKHNLQM-KIRSGGHD 114 (538)
Q Consensus 78 ~~p~~vv~p~s~~dv~~~v~~a~~~~~~~-~~~ggGh~ 114 (538)
..|.+|+++.+++++.++.+.|++.|+|. .++-.|+.
T Consensus 54 g~~Kvvlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 91 (121)
T 1wn2_A 54 GQKKVVVKVESEEELFKLKAEAEKLGLPNALIRDAGLT 91 (121)
T ss_dssp TCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECTTCT
T ss_pred CCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 58899999999999999999999999996 56666663
No 49
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=26.01 E-value=25 Score=37.78 Aligned_cols=28 Identities=14% Similarity=0.278 Sum_probs=18.7
Q ss_pred hhhhhcc-ccHHHHHHhhcccCCCCCCCC
Q 009297 497 YGINYFL-ENFDRLVEIKTKVDPDNFFRN 524 (538)
Q Consensus 497 ~~~~yyg-~n~~RL~~IK~kYDP~~vF~~ 524 (538)
|-...+| ..++-+++||+.+||+|+|+-
T Consensus 552 ~l~~~~g~~~~~lmr~iK~a~DP~gIlNP 580 (584)
T 2uuu_A 552 WMTRYATRGWINVYRSLKETIDPKDICNP 580 (584)
T ss_dssp -------CTHHHHHHHHHHHHCTTCCBSC
T ss_pred HHHHhcCHHHHHHHHHHHHHcCCCcCCCC
Confidence 4444555 468999999999999999964
No 50
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=25.27 E-value=94 Score=25.46 Aligned_cols=38 Identities=21% Similarity=0.254 Sum_probs=30.5
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHHhCCCcE-EEEecCcC
Q 009297 77 TPKPVLIVAAMHESHVQAAIICAKKHNLQM-KIRSGGHD 114 (538)
Q Consensus 77 ~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~-~~~ggGh~ 114 (538)
...|.+|+.+.+++++.++.+.|++.|+|. .++-.|+.
T Consensus 47 ~g~~kivlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~T 85 (115)
T 2zv3_A 47 EGQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDAGHT 85 (115)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEEECC--
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHcCCCEEEEEeCCce
Confidence 368999999999999999999999999986 45555543
No 51
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=25.02 E-value=95 Score=25.50 Aligned_cols=37 Identities=8% Similarity=0.057 Sum_probs=31.8
Q ss_pred CCccEEEEcCCHHHHHHHHHHHHhCCCcE-EEEecCcC
Q 009297 78 PKPVLIVAAMHESHVQAAIICAKKHNLQM-KIRSGGHD 114 (538)
Q Consensus 78 ~~p~~vv~p~s~~dv~~~v~~a~~~~~~~-~~~ggGh~ 114 (538)
..|.+|+.+.+++++.++.+.|++.|+|. .++-.|+.
T Consensus 50 g~~kiVlk~~~e~~l~~l~~~a~~~gl~~~~v~DAG~T 87 (117)
T 1rlk_A 50 GQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGYT 87 (117)
T ss_dssp TCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCSS
T ss_pred CCeEEEEecCCHHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 68999999999999999999999999996 55556654
No 52
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=24.18 E-value=1.1e+02 Score=25.52 Aligned_cols=37 Identities=8% Similarity=0.050 Sum_probs=32.0
Q ss_pred CCccEEEEcCCHHHHHHHHHHHHhCCCcE-EEEecCcC
Q 009297 78 PKPVLIVAAMHESHVQAAIICAKKHNLQM-KIRSGGHD 114 (538)
Q Consensus 78 ~~p~~vv~p~s~~dv~~~v~~a~~~~~~~-~~~ggGh~ 114 (538)
..+.+|+.+.+++++.++.+.|++.|+|. .|+-.|+.
T Consensus 47 G~~Kvvlk~~~e~el~~L~~~a~~~gl~~~~I~DAG~T 84 (123)
T 1rzw_A 47 GQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLT 84 (123)
T ss_dssp CSSEEEEECSCHHHHHHHHHHHHHTTCCEEEECCTTCC
T ss_pred CCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEECCCCc
Confidence 57889999999999999999999999996 56666665
No 53
>1q7s_A BIT1, protein CGI-147; apoptosis; 2.00A {Homo sapiens} SCOP: c.131.1.1
Probab=22.84 E-value=1.3e+02 Score=24.63 Aligned_cols=36 Identities=28% Similarity=0.365 Sum_probs=30.7
Q ss_pred CCccEEEEcCCHHHHHHHHHHHHhCCCcE-EEEecCc
Q 009297 78 PKPVLIVAAMHESHVQAAIICAKKHNLQM-KIRSGGH 113 (538)
Q Consensus 78 ~~p~~vv~p~s~~dv~~~v~~a~~~~~~~-~~~ggGh 113 (538)
..|.++++..+++++.++.+.|++.|+|. .++=.|+
T Consensus 50 g~~KVvlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 86 (117)
T 1q7s_A 50 GQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQDAGR 86 (117)
T ss_dssp TCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred CCeeEEEEcCCHHHHHHHHHHHHHCCCCEEEEEECCC
Confidence 46999999999999999999999999985 5555665
No 54
>4b4t_W RPN10, 26S proteasome regulatory subunit RPN10; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=21.93 E-value=64 Score=30.81 Aligned_cols=27 Identities=19% Similarity=0.138 Sum_probs=24.0
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEecCc
Q 009297 87 MHESHVQAAIICAKKHNLQMKIRSGGH 113 (538)
Q Consensus 87 ~s~~dv~~~v~~a~~~~~~~~~~ggGh 113 (538)
.+.+++.++++-++++|+.+.+.|=|.
T Consensus 120 ~~~~~l~~lak~lkk~gI~v~vIgFG~ 146 (268)
T 4b4t_W 120 DSRDELIRLAKTLKKNNVAVDIINFGE 146 (268)
T ss_dssp SCHHHHHHHHHHHHHHTEEEEEEEESS
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEEeCC
Confidence 367899999999999999999999774
No 55
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=21.13 E-value=1e+02 Score=23.47 Aligned_cols=34 Identities=15% Similarity=0.174 Sum_probs=29.2
Q ss_pred cEEEEcCCHHHHHHHHHHHHhCCCcEEEEecCcC
Q 009297 81 VLIVAAMHESHVQAAIICAKKHNLQMKIRSGGHD 114 (538)
Q Consensus 81 ~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~ 114 (538)
.+|-..++..|+..+|+-.+.+|.|+++.-.|-+
T Consensus 29 ryirtatssqdirdiiksmkdngkplvvfvngas 62 (112)
T 2lnd_A 29 RYIRTATSSQDIRDIIKSMKDNGKPLVVFVNGAS 62 (112)
T ss_dssp TTEEEECSHHHHHHHHHHHTTCCSCEEEEECSCC
T ss_pred ceeeeccchhhHHHHHHHHHhcCCeEEEEecCcc
Confidence 3577788999999999999999999988877654
Done!