Query         009299
Match_columns 538
No_of_seqs    172 out of 2064
Neff          10.9
Searched_HMMs 46136
Date          Thu Mar 28 22:52:08 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009299.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009299hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0158 Cytochrome P450 CYP3/C 100.0 5.8E-82 1.3E-86  606.2  44.9  458   46-538    27-499 (499)
  2 KOG0156 Cytochrome P450 CYP2 s 100.0 8.7E-81 1.9E-85  608.3  42.1  454   47-537    23-487 (489)
  3 PLN02183 ferulate 5-hydroxylas 100.0 3.4E-75 7.5E-80  590.8  43.1  465   36-537    22-511 (516)
  4 PTZ00404 cytochrome P450; Prov 100.0 3.2E-75   7E-80  588.1  41.2  450   47-537    26-482 (482)
  5 PLN02290 cytokinin trans-hydro 100.0 9.4E-75   2E-79  589.3  43.9  447   47-538    39-515 (516)
  6 PLN03234 cytochrome P450 83B1; 100.0 7.6E-74 1.7E-78  580.7  45.4  459   47-537    25-498 (499)
  7 PLN02971 tryptophan N-hydroxyl 100.0 4.9E-74 1.1E-78  584.2  43.2  459   49-537    56-533 (543)
  8 PLN00110 flavonoid 3',5'-hydro 100.0 9.4E-74   2E-78  576.7  41.6  476   28-537     6-496 (504)
  9 PLN02687 flavonoid 3'-monooxyg 100.0 3.5E-73 7.7E-78  576.2  44.9  457   50-537    34-508 (517)
 10 KOG0157 Cytochrome P450 CYP4/C 100.0 4.2E-74 9.1E-79  574.0  36.1  448   48-538    33-496 (497)
 11 PLN02500 cytochrome P450 90B1  100.0 1.6E-73 3.4E-78  576.0  39.2  431   49-536    37-488 (490)
 12 PLN02394 trans-cinnamate 4-mon 100.0 7.2E-73 1.6E-77  574.1  43.3  457   47-538    27-502 (503)
 13 PLN02169 fatty acid (omega-1)- 100.0 8.4E-73 1.8E-77  568.6  42.2  453   46-537    27-499 (500)
 14 PLN03112 cytochrome P450 famil 100.0 6.7E-73 1.5E-77  575.4  41.8  459   48-537    30-507 (514)
 15 PLN02774 brassinosteroid-6-oxi 100.0 1.9E-73 4.1E-78  570.8  37.1  442   36-536    17-462 (463)
 16 PLN00168 Cytochrome P450; Prov 100.0 8.1E-73 1.7E-77  573.9  42.0  455   48-538    33-517 (519)
 17 KOG0159 Cytochrome P450 CYP11/ 100.0 8.8E-73 1.9E-77  529.1  36.7  446   49-538    49-518 (519)
 18 PLN03195 fatty acid omega-hydr 100.0 1.8E-72 3.8E-77  572.1  39.4  453   47-538    27-516 (516)
 19 PLN02966 cytochrome P450 83A1  100.0 1.2E-71 2.6E-76  563.5  42.5  465   39-538    18-498 (502)
 20 PLN02196 abscisic acid 8'-hydr 100.0 1.9E-71 4.2E-76  555.7  37.9  425   49-537    34-462 (463)
 21 PLN02655 ent-kaurene oxidase   100.0 6.6E-71 1.4E-75  552.8  38.9  447   52-538     1-464 (466)
 22 PF00067 p450:  Cytochrome P450 100.0 2.1E-72 4.6E-77  569.9  27.9  449   52-534     1-463 (463)
 23 PLN02738 carotene beta-ring hy 100.0 1.4E-70 2.9E-75  559.9  39.3  450   47-538   112-595 (633)
 24 PLN03141 3-epi-6-deoxocathaste 100.0 8.9E-71 1.9E-75  550.2  35.9  429   48-538     5-450 (452)
 25 PLN03018 homomethionine N-hydr 100.0 3.1E-69 6.8E-74  544.5  46.6  462   51-537    41-523 (534)
 26 PLN02302 ent-kaurenoic acid ox 100.0 4.4E-69 9.4E-74  546.3  41.1  432   49-538    41-488 (490)
 27 PLN02987 Cytochrome P450, fami 100.0 1.3E-68 2.8E-73  533.1  38.1  452   26-538     4-469 (472)
 28 PLN02426 cytochrome P450, fami 100.0 1.2E-67 2.5E-72  530.4  41.6  441   57-538    48-500 (502)
 29 KOG0684 Cytochrome P450 [Secon 100.0   6E-68 1.3E-72  483.8  34.1  443   50-538    31-485 (486)
 30 PLN02936 epsilon-ring hydroxyl 100.0 6.4E-67 1.4E-71  526.2  38.8  442   53-538    15-482 (489)
 31 PLN02648 allene oxide synthase 100.0 9.6E-59 2.1E-63  458.3  29.6  403   48-512    15-463 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 1.5E-54 3.2E-59  423.9  32.8  380   73-537    26-410 (411)
 33 PF12508 DUF3714:  Protein of u  70.6     1.8 3.9E-05   37.4   0.7   44  391-435    51-94  (200)
 34 PF12554 MOZART1:  Mitotic-spin  59.0      36 0.00078   21.7   4.7   42  332-373     6-47  (48)
 35 PF08492 SRP72:  SRP72 RNA-bind  53.1      11 0.00023   25.3   1.7    8  454-461    44-51  (59)
 36 TIGR03779 Bac_Flav_CT_M Bacter  50.0     5.3 0.00011   38.7  -0.1   44  391-435   254-297 (410)
 37 PF15300 INT_SG_DDX_CT_C:  INTS  43.5      26 0.00056   24.0   2.5   45  362-406     4-54  (65)
 38 PF05952 ComX:  Bacillus compet  43.3      21 0.00045   23.6   1.9   22  355-376     5-26  (57)
 39 PRK06789 flagellar motor switc  40.3      44 0.00095   23.6   3.3   39  399-437    22-63  (74)
 40 PF09201 SRX:  SRX;  InterPro:   38.3      30 0.00064   27.6   2.4   22  482-503    19-40  (148)
 41 KOG3506 40S ribosomal protein   35.2      17 0.00038   23.5   0.6   11  474-484    12-22  (56)
 42 PF05524 PEP-utilisers_N:  PEP-  32.0 2.5E+02  0.0055   22.0   8.4   65  281-356    40-104 (123)
 43 COG4459 NapE Periplasmic nitra  28.8      31 0.00068   22.5   1.0   11   47-57     51-61  (62)
 44 PTZ00370 STEVOR; Provisional    26.1      63  0.0014   29.6   2.8   19   28-46    262-280 (296)
 45 PF05961 Chordopox_A13L:  Chord  25.8 1.3E+02  0.0029   20.6   3.5   22   27-48      6-27  (68)
 46 PRK13713 conjugal transfer pro  23.8 3.6E+02  0.0077   21.1   9.6   78  287-364     4-92  (118)
 47 PF05084 GRA6:  Granule antigen  22.9 1.3E+02  0.0028   24.6   3.7   35   29-63    156-193 (215)
 48 PHA03049 IMV membrane protein;  21.5   2E+02  0.0043   19.7   3.6   19   27-45      6-24  (68)
 49 PF07886 BA14K:  BA14K-like pro  21.4      69  0.0015   18.2   1.4   16  469-484    16-31  (31)
 50 PF05545 FixQ:  Cbb3-type cytoc  20.3 1.5E+02  0.0033   18.8   3.0   19   28-46     15-33  (49)
 51 KOG3653 Transforming growth fa  20.0   2E+02  0.0044   28.8   5.0   17   81-97    222-238 (534)

No 1  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=5.8e-82  Score=606.19  Aligned_cols=458  Identities=35%  Similarity=0.599  Sum_probs=367.4

Q ss_pred             cccccCCCCCCCCCcccchhhhhccC--ChHHHHHHHHhCCeeEEEeCCccEEEEeCHHHHHHHhccccCCCCCCC--CC
Q 009299           46 YWKVRRVPGPPAIPLVGHIPLMAKYG--PDVFSILAKRYGPIFRFHMGRQPLIIVADAELCREVGIKKFKDIPNRS--IP  121 (538)
Q Consensus        46 ~~~~~~~PgP~~~p~~G~~~~~~~~~--~~~~~~~~~~yG~v~~i~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~--~~  121 (538)
                      +|+.+.+|||++.|++||+..+.+..  .......+.+||+++.+..+.+|.++|+||+.+++|++++++.|.++.  ..
T Consensus        27 yw~rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~  106 (499)
T KOG0158|consen   27 YWRRRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIY  106 (499)
T ss_pred             hhccCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCc
Confidence            57888999999999999998876543  444444455559999999999999999999999999999999999854  22


Q ss_pred             CCCCCCccccCcccccCCccHHHHHhhhcccCChhhHhhhhHhHHHHHHHHHhhccC-C---CccchhhhHHHHHHHHHH
Q 009299          122 SPIAASPLHQKGLFFTKNERWSTMRNTILSVYQPSHLASLVPTMQSFIESATQNLDS-T---EDITFSDLSLKMATDVIG  197 (538)
Q Consensus       122 ~~~~~~~~~~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~-~---~~vdl~~~~~~~~~~vi~  197 (538)
                      ..... +....+++..+|+.||++|..++|+|++.+++.+.+.|++.++++++++++ .   ..+++.+.+.+++.|||+
T Consensus       107 ~d~~~-~l~~~~Lf~~~g~~WK~lR~~lsP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI~  185 (499)
T KOG0158|consen  107 GDPED-PLSALNLFFLRGERWKRLRTKLSPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVIG  185 (499)
T ss_pred             CCCCC-cccccCchhccCchHHHHHHhhccccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHHh
Confidence            22221 455578999999999999999999999999999999999999999999986 2   278889999999999999


Q ss_pred             HhhcccccCCCCCCCCCCCCcccCCCCCcchhhhhHhhhhhhhhhhhhhccchhHHHhhhhhhchhhHHHHHhhhcCCCc
Q 009299          198 QAAFGVNFGLSKPQPISDSVTSVDTPANASEVSDFINQHIYSTTQLKMDLSGSLSIILGLLFPIIQEPFRQILKRIPGTM  277 (538)
Q Consensus       198 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~p~~~  277 (538)
                      +++||.+.+...+.              ..++....+.....     +...+.........+|.+...+.         .
T Consensus       186 ~~AfG~~~~s~~d~--------------~~~F~~~~~~~~~~-----~~~~~~l~~~~~~~~p~l~~~l~---------~  237 (499)
T KOG0158|consen  186 SCAFGLDANSLRDP--------------KAEFRRMGRRAFFL-----SRGLFPLKFMLIFLFPKLALPLR---------V  237 (499)
T ss_pred             HhhcccchhhhcCc--------------hHHHHHhhHHHHHH-----hhccchHhHhHHHHhHHHHHhhh---------c
Confidence            99999988766531              01111111111111     01112221222233443332211         1


Q ss_pred             hHHHHHHhHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHhchh--ccccCC-CCCHHhHHHHHHHHHhhchhHHHHHHHH
Q 009299          278 DWKFARTNKNLSGRLEEIVSKRMEETNTSSKDFLSLILKARES--ETASKN-IFTPDYISAVTYEHLLAGSATTAFTLSS  354 (538)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~d~l~~ll~~~~~--~~~~~~-~lt~~~i~~~~~~~~~ag~dTts~tl~~  354 (538)
                      .....+..+.+.+.+.+.++.|... ...++|+++.+++.+.+  ...... .+|.+||++++..+++||.||||+|+++
T Consensus       238 ~~~~~~~~~~~~~~v~~~v~~R~~~-~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf  316 (499)
T KOG0158|consen  238 KLFPEDVTDFFRKLVNSRVEQREKE-NIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSF  316 (499)
T ss_pred             ccChHHHHHHHHHHHHHHHHHHHhc-CCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHH
Confidence            1123345556666677777777333 45789999999998854  222122 4999999999999999999999999999


Q ss_pred             HHHHHhcChHHHHHHHHHHHHcCCCCCCCChhhhhhcCchHHHHHHHHhcCcCCCcccceecCCceeeC-CEEeCCCCEE
Q 009299          355 VVYLVAGHPEVEKKVLAEIDAFGPHDQMPTAHDLQHKFPYLNQVIKEAMRVYLVSPLVARETSKEVKIG-GYHLPKGTWV  433 (538)
Q Consensus       355 ~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~-g~~Ip~G~~v  433 (538)
                      ++|+||.||++|+|||+||+++..+....+++.+. +|+||++||+||||+||++|.+.|.+++|+++. ++.||||+.|
T Consensus       317 ~lYeLA~~PdvQ~kLreEI~~~~~~~~~ltyd~l~-~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~kG~~V  395 (499)
T KOG0158|consen  317 ALYELAKNPDVQDKLREEIDEVLEEKEGLTYDSLS-KLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPKGTPV  395 (499)
T ss_pred             HHHHHhcChHHHHHHHHHHHHHhcccCCCCHHHHh-CCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCCCCEE
Confidence            99999999999999999999986665449999997 999999999999999999999999999999999 9999999999


Q ss_pred             EecccccccCCCCCCCCCCCCCCCCCCCchhhhcCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHceeeeCCCCC
Q 009299          434 WLALGVLAKDPKNFPEPCKFKPERFDPNCEEEKRRHPYAFIPFGIGPRACIGQKFSLQEIKLSLIQLYRKCVFRHSPNME  513 (538)
Q Consensus       434 ~~~~~~~~~d~~~~~dp~~F~PeR~l~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~  513 (538)
                      .++++++||||++||||++|+||||.+++.+  ..++.+|+|||.|||.|+|.+||.+|+|+.|++||++|+|+.++...
T Consensus       396 ~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~--~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~  473 (499)
T KOG0158|consen  396 MIPTYALHHDPEYWPEPEKFKPERFEEENNK--SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTI  473 (499)
T ss_pred             EeecccccCCcccCCCcccCCCccCCCCccc--ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCccc
Confidence            9999999999999999999999999976543  55788999999999999999999999999999999999999988433


Q ss_pred             CCcccee---ceeeeccCceEEEEEecC
Q 009299          514 KPLELEY---GIVLNFKHGVKLTVKNRK  538 (538)
Q Consensus       514 ~~~~~~~---~~~~~~~~~~~v~~~~r~  538 (538)
                      .+  ...   +.++.|++|+++++++|+
T Consensus       474 ~~--~~~~~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  474 IP--LEGDPKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             Cc--ccCCccceeeecCCceEEEEEeCC
Confidence            33  433   778999999999999995


No 2  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=8.7e-81  Score=608.35  Aligned_cols=454  Identities=29%  Similarity=0.506  Sum_probs=368.0

Q ss_pred             ccccCCCCCCCCCcccchhhhhcc-CChHHHHHHHHhCCeeEEEeCCccEEEEeCHHHHHHHhccccCCCCCCCCCCCC-
Q 009299           47 WKVRRVPGPPAIPLVGHIPLMAKY-GPDVFSILAKRYGPIFRFHMGRQPLIIVADAELCREVGIKKFKDIPNRSIPSPI-  124 (538)
Q Consensus        47 ~~~~~~PgP~~~p~~G~~~~~~~~-~~~~~~~~~~~yG~v~~i~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~-  124 (538)
                      .+.+.||||+++|++||++++... ++..+.+|+++|||||++++|..++|||+|+++++|++++++..+++|+..... 
T Consensus        23 ~~~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~  102 (489)
T KOG0156|consen   23 KRRNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATL  102 (489)
T ss_pred             CCCCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhH
Confidence            346778999999999999999887 789999999999999999999999999999999999999999999999862112 


Q ss_pred             CCCccccCccccc-CCccHHHHHhhhcc-cCChhhHhhhhHhHHHHHHHHHhhccC---CCccchhhhHHHHHHHHHHHh
Q 009299          125 AASPLHQKGLFFT-KNERWSTMRNTILS-VYQPSHLASLVPTMQSFIESATQNLDS---TEDITFSDLSLKMATDVIGQA  199 (538)
Q Consensus       125 ~~~~~~~~~l~~~-~g~~w~~~R~~~~~-~f~~~~l~~~~~~~~~~~~~~~~~l~~---~~~vdl~~~~~~~~~~vi~~~  199 (538)
                      .....++.|++.+ +|+.|+.+||+... .++...++.+...-.++++.+++.+.+   +++||+...+..++.++|++.
T Consensus       103 ~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nvI~~~  182 (489)
T KOG0156|consen  103 KYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNVICRM  182 (489)
T ss_pred             HHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHHHHHH
Confidence            2122356788877 79999999998864 567777777766668888888888773   268999999999999999999


Q ss_pred             hcccccCCCCCCCCCCCCcccCCCCCcchhhhhHhhhhhhhhhhhhhccchhHHHhhhhhhchhhHHHHHhhhcC--CCc
Q 009299          200 AFGVNFGLSKPQPISDSVTSVDTPANASEVSDFINQHIYSTTQLKMDLSGSLSIILGLLFPIIQEPFRQILKRIP--GTM  277 (538)
Q Consensus       200 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~p--~~~  277 (538)
                      +||.++...++.             ...++.+++.......        +.  ..+.+++|.       ++.+++  ...
T Consensus       183 ~fG~rf~~~~~~-------------~~~~~~~l~~~~~~~~--------~~--~~~~d~~p~-------~l~~~~~~~g~  232 (489)
T KOG0156|consen  183 LFGRRFEEEDEE-------------EFLELKELVEESLELL--------GS--FNLSDYFPF-------LLRWLDGISGL  232 (489)
T ss_pred             HhCCccccCCch-------------HHHHHHHHHHHHHHHh--------CC--ccHHHHhhH-------HHHhcccccHH
Confidence            999999864220             1112333333322221        11  123344552       111222  123


Q ss_pred             hHHHHHHhHHHHHHHHHHHHHHHHhh-CCCcchHHHHHHHhchhccccCCCCCHHhHHHHHHHHHhhchhHHHHHHHHHH
Q 009299          278 DWKFARTNKNLSGRLEEIVSKRMEET-NTSSKDFLSLILKARESETASKNIFTPDYISAVTYEHLLAGSATTAFTLSSVV  356 (538)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~i~~r~~~~-~~~~~d~l~~ll~~~~~~~~~~~~lt~~~i~~~~~~~~~ag~dTts~tl~~~l  356 (538)
                      ..+.......+..++++.|+++.+.. .+++.|++|.+++..+++..+.  +|++++.+.+.++++||+|||++|+.|++
T Consensus       233 ~~~~~~~~~~~~~~~~~~i~eh~~~~~~~~~~D~vD~lL~~~~~~~~~~--~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~  310 (489)
T KOG0156|consen  233 EKRLKKVSKRLDEFLERIIDEHREKIGDEEGRDFVDALLKLMKEEKAEG--LTDDHLKALILDLFLAGTDTTATTLEWAM  310 (489)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHhhcccccCC--CCHHHHHHHHHHHHhcccchHHHHHHHHH
Confidence            34455555568889999999887642 1233899999999876554322  99999999999999999999999999999


Q ss_pred             HHHhcChHHHHHHHHHHHHcCCCCCCCChhhhhhcCchHHHHHHHHhcCcCCCcc-cceecCCceeeCCEEeCCCCEEEe
Q 009299          357 YLVAGHPEVEKKVLAEIDAFGPHDQMPTAHDLQHKFPYLNQVIKEAMRVYLVSPL-VARETSKEVKIGGYHLPKGTWVWL  435 (538)
Q Consensus       357 ~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~Ip~G~~v~~  435 (538)
                      .+|++||++|+|+++||+++++.++.++.+|+. +||||+|||+|++|++|++|. ++|.+++|+.++||.|||||.|++
T Consensus       311 a~Ll~~Pev~~K~qeEId~vvG~~r~v~e~D~~-~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~v  389 (489)
T KOG0156|consen  311 AELLNNPEVQKKLQEEIDEVVGKGRLVSESDLP-KLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLV  389 (489)
T ss_pred             HHHHhCHHHHHHHHHHHHHHhCCCCCCChhhhc-cCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEE
Confidence            999999999999999999998888779999997 999999999999999999997 899999999999999999999999


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCchhhhcCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHceeeeCCCCCCC
Q 009299          436 ALGVLAKDPKNFPEPCKFKPERFDPNCEEEKRRHPYAFIPFGIGPRACIGQKFSLQEIKLSLIQLYRKCVFRHSPNMEKP  515 (538)
Q Consensus       436 ~~~~~~~d~~~~~dp~~F~PeR~l~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~  515 (538)
                      +.|++||||++|+||++|+||||++++ +.+ .....++|||.|+|.|||..+|.+++.+++|.+|++|||+++.+ ..+
T Consensus       390 n~~ai~rDp~vw~dP~eF~PERFl~~~-d~~-~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~-~~d  466 (489)
T KOG0156|consen  390 NLWAIHRDPKVWEDPEEFKPERFLDSN-DGK-GLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG-KVD  466 (489)
T ss_pred             eehhhhcCCccCCCccccChhhhcCCc-ccc-CCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC-CCC
Confidence            999999999999999999999999864 111 14568999999999999999999999999999999999999877 445


Q ss_pred             ccceeceeeeccCceEEEEEec
Q 009299          516 LELEYGIVLNFKHGVKLTVKNR  537 (538)
Q Consensus       516 ~~~~~~~~~~~~~~~~v~~~~r  537 (538)
                      .... ++++..+.++.+..++|
T Consensus       467 ~~e~-~~~~~~~~pl~~~~~~r  487 (489)
T KOG0156|consen  467 MEEA-GLTLKKKKPLKAVPVPR  487 (489)
T ss_pred             Cccc-ccceecCCcceeeeecC
Confidence            5555 46677788888777766


No 3  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=3.4e-75  Score=590.79  Aligned_cols=465  Identities=21%  Similarity=0.383  Sum_probs=351.9

Q ss_pred             HHHHHHHhhccccccCCCCCCCCCcccchhhhhccCChHHHHHHHHhCCeeEEEeCCccEEEEeCHHHHHHHhccccCCC
Q 009299           36 AGVLGYLYGPYWKVRRVPGPPAIPLVGHIPLMAKYGPDVFSILAKRYGPIFRFHMGRQPLIIVADAELCREVGIKKFKDI  115 (538)
Q Consensus        36 ~~~~~~~~~~~~~~~~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~~p~~i~~i~~~~~~~~  115 (538)
                      .+++.++.+...+.+.+|||+++|++|++..+.......+.+|+++||++|++++|++++|+|+||+++++++.++...|
T Consensus        22 ~~~~~~~~~~~~~~~~ppgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f  101 (516)
T PLN02183         22 FLFLGLISRLRRRLPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVF  101 (516)
T ss_pred             HHHHHHHhhccCCCCCCcCCCCCCeeccHHhcCCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhh
Confidence            33344444444566788999999999998877555567889999999999999999999999999999999998776667


Q ss_pred             CCCCCCCCCCCC-ccccCcccccCCccHHHHHhh-hcccCChhhHhhhhHhHHHHHHHHHhhccC--CCccchhhhHHHH
Q 009299          116 PNRSIPSPIAAS-PLHQKGLFFTKNERWSTMRNT-ILSVYQPSHLASLVPTMQSFIESATQNLDS--TEDITFSDLSLKM  191 (538)
Q Consensus       116 ~~~~~~~~~~~~-~~~~~~l~~~~g~~w~~~R~~-~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~--~~~vdl~~~~~~~  191 (538)
                      +.++........ ...+.+++..+|+.|+++|++ ++++|+.+.++.+.+. .++++.+++.|.+  ++++|+.+++..+
T Consensus       102 ~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~~~~~~v~~~~~~~~~  180 (516)
T PLN02183        102 SNRPANIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSSNIGKPVNIGELIFTL  180 (516)
T ss_pred             cCCCcccchhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHhcCCCcEeHHHHHHHH
Confidence            666432211111 112356777889999999998 5799999999988875 4678888888843  6689999999999


Q ss_pred             HHHHHHHhhcccccCCCCCCCCCCCCcccCCCCCcchhhhhHhhhhhhhhhhhhhccchhHHHhhhhhhchhhHHHHHhh
Q 009299          192 ATDVIGQAAFGVNFGLSKPQPISDSVTSVDTPANASEVSDFINQHIYSTTQLKMDLSGSLSIILGLLFPIIQEPFRQILK  271 (538)
Q Consensus       192 ~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~  271 (538)
                      ++|++++++||..++...                 +++.+.+.......        ..  ......+|++.        
T Consensus       181 ~~~vi~~~~fG~~~~~~~-----------------~~~~~~~~~~~~~~--------~~--~~~~~~~p~~~--------  225 (516)
T PLN02183        181 TRNITYRAAFGSSSNEGQ-----------------DEFIKILQEFSKLF--------GA--FNVADFIPWLG--------  225 (516)
T ss_pred             HHHHHHhHhhcCcccchH-----------------HHHHHHHHHHHHHh--------CC--ccHHHhcchhH--------
Confidence            999999999998654211                 11222222111100        00  01122334321        


Q ss_pred             hc-CCCchHHHHHHhHHHHHHHHHHHHHHHHhhC---------CCcchHHHHHHHhchhcc--------ccCCCCCHHhH
Q 009299          272 RI-PGTMDWKFARTNKNLSGRLEEIVSKRMEETN---------TSSKDFLSLILKARESET--------ASKNIFTPDYI  333 (538)
Q Consensus       272 ~~-p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~---------~~~~d~l~~ll~~~~~~~--------~~~~~lt~~~i  333 (538)
                      ++ +....++..+..+.+.+++.++|+++.++..         ...+|+++.+++..+++.        .....++++++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i  305 (516)
T PLN02183        226 WIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNI  305 (516)
T ss_pred             hcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccHHHHHHHhhhccccccccccccccCCCCHHHH
Confidence            11 1112334555666677777777766543211         124689999998654321        01124899999


Q ss_pred             HHHHHHHHhhchhHHHHHHHHHHHHHhcChHHHHHHHHHHHHcCCCCCCCChhhhhhcCchHHHHHHHHhcCcCCCcccc
Q 009299          334 SAVTYEHLLAGSATTAFTLSSVVYLVAGHPEVEKKVLAEIDAFGPHDQMPTAHDLQHKFPYLNQVIKEAMRVYLVSPLVA  413 (538)
Q Consensus       334 ~~~~~~~~~ag~dTts~tl~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~  413 (538)
                      ..++.++++||+|||+.+++|++++|+.||++|+|+++|++++.+.++.++.+++. +|||++|||+||||++|++|++.
T Consensus       306 ~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~~v~~~~~~~~~~~l~-~L~yl~avi~EtlRl~p~~p~~~  384 (516)
T PLN02183        306 KAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQELADVVGLNRRVEESDLE-KLTYLKCTLKETLRLHPPIPLLL  384 (516)
T ss_pred             HHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhc-cChHHHHHHHHHhccCCCcccee
Confidence            99999999999999999999999999999999999999999987655667888986 99999999999999999999988


Q ss_pred             eecCCceeeCCEEeCCCCEEEecccccccCCCCCCCCCCCCCCCCCCCchhhhcCCCCcccccCCCCCCCcchHHHHHHH
Q 009299          414 RETSKEVKIGGYHLPKGTWVWLALGVLAKDPKNFPEPCKFKPERFDPNCEEEKRRHPYAFIPFGIGPRACIGQKFSLQEI  493 (538)
Q Consensus       414 R~~~~d~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~dp~~F~PeR~l~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~  493 (538)
                      |.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||++++......+..+|+|||+|+|.|+|++||++|+
T Consensus       385 r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~  464 (516)
T PLN02183        385 HETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYAL  464 (516)
T ss_pred             eeccCceeECCEEECCCCEEEEehhhhcCCccccCCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHH
Confidence            99999999999999999999999999999999999999999999996543222234568999999999999999999999


Q ss_pred             HHHHHHHHHHceeeeCCCCCC-Cccc--eeceeeeccCceEEEEEec
Q 009299          494 KLSLIQLYRKCVFRHSPNMEK-PLEL--EYGIVLNFKHGVKLTVKNR  537 (538)
Q Consensus       494 ~~~la~ll~~f~~~~~~~~~~-~~~~--~~~~~~~~~~~~~v~~~~r  537 (538)
                      ++++|+++++|+|++.++... +...  ..+.+..+..++++.+++|
T Consensus       465 ~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  511 (516)
T PLN02183        465 DLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTAPRATRLVAVPTYR  511 (516)
T ss_pred             HHHHHHHHheeEEEcCCCCCCCCCChhhccccccccCCCcEEEeecC
Confidence            999999999999998775421 1222  2344443455777887776


No 4  
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=3.2e-75  Score=588.13  Aligned_cols=450  Identities=23%  Similarity=0.370  Sum_probs=350.1

Q ss_pred             ccccCCCCCCCCCcccchhhhhccCChHHHHHHHHhCCeeEEEeCCccEEEEeCHHHHHHHhccccCCCCCCCCCCCCCC
Q 009299           47 WKVRRVPGPPAIPLVGHIPLMAKYGPDVFSILAKRYGPIFRFHMGRQPLIIVADAELCREVGIKKFKDIPNRSIPSPIAA  126 (538)
Q Consensus        47 ~~~~~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~  126 (538)
                      ++...+|||+++|++||+..+.++++..+.+++++||+||++++|++++|+++||+++++++.++...+..++...... 
T Consensus        26 ~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~-  104 (482)
T PTZ00404         26 IHKNELKGPIPIPILGNLHQLGNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSIK-  104 (482)
T ss_pred             ccCCCCCCCCCCCeeccHhhhcccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcceee-
Confidence            4566799999999999998887778889999999999999999999999999999999999987655666554322221 


Q ss_pred             CccccCcccccCCccHHHHHhhhcccCChhhHhhhhHhHHHHHHHHHhhccC----CCccchhhhHHHHHHHHHHHhhcc
Q 009299          127 SPLHQKGLFFTKNERWSTMRNTILSVYQPSHLASLVPTMQSFIESATQNLDS----TEDITFSDLSLKMATDVIGQAAFG  202 (538)
Q Consensus       127 ~~~~~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~----~~~vdl~~~~~~~~~~vi~~~~fG  202 (538)
                      ....+.|+++.+|+.|+++|++++++|+...++.+.+.+.+.++.+++.|.+    ++.+|+.+++..+++|++++++||
T Consensus       105 ~~~~~~~l~~~~g~~w~~~Rk~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG  184 (482)
T PTZ00404        105 HGTFYHGIVTSSGEYWKRNREIVGKAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMFKYIFN  184 (482)
T ss_pred             eeccCCceeccChHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHhc
Confidence            1223678899999999999999999999999999999999999999998852    556899999999999999999999


Q ss_pred             cccCCCCCCCCCCCCcccCCCCCcchhhhhHhhhhhhhhhhhhhccchhHHHhhhhhhchhhHHHHHhhhcCCCchHHHH
Q 009299          203 VNFGLSKPQPISDSVTSVDTPANASEVSDFINQHIYSTTQLKMDLSGSLSIILGLLFPIIQEPFRQILKRIPGTMDWKFA  282 (538)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~p~~~~~~~~  282 (538)
                      .+++..++.             .+++...+...........   ..+.    +...++++...+..+.        ....
T Consensus       185 ~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~~~~--------~~~~  236 (482)
T PTZ00404        185 EDISFDEDI-------------HNGKLAELMGPMEQVFKDL---GSGS----LFDVIEITQPLYYQYL--------EHTD  236 (482)
T ss_pred             ccccccccc-------------chhHHHHHHHHHHHHHHHh---CCCc----hhhhhhHhhhhhHHHH--------HHHH
Confidence            987643210             0011112222211111000   0000    0111122111111111        1123


Q ss_pred             HHhHHHHHHHHHHHHHHHHhhC-CCcchHHHHHHHhchhccccCCCCCHHhHHHHHHHHHhhchhHHHHHHHHHHHHHhc
Q 009299          283 RTNKNLSGRLEEIVSKRMEETN-TSSKDFLSLILKARESETASKNIFTPDYISAVTYEHLLAGSATTAFTLSSVVYLVAG  361 (538)
Q Consensus       283 ~~~~~~~~~~~~~i~~r~~~~~-~~~~d~l~~ll~~~~~~~~~~~~lt~~~i~~~~~~~~~ag~dTts~tl~~~l~~L~~  361 (538)
                      +..+.+.+++++.++++++..+ ...+|+++.|+++.++.    .....+++++++..+++||+|||+++++|++++|++
T Consensus       237 ~~~~~~~~~~~~~i~~~~~~~~~~~~~dll~~ll~~~~~~----~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~  312 (482)
T PTZ00404        237 KNFKKIKKFIKEKYHEHLKTIDPEVPRDLLDLLIKEYGTN----TDDDILSILATILDFFLAGVDTSATSLEWMVLMLCN  312 (482)
T ss_pred             HHHHHHHHHHHHHHHHHHHccCCCCcccHHHHHHHHhccC----CcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHc
Confidence            4455667777777776554322 24579999999864321    112334588999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHHHcCCCCCCCChhhhhhcCchHHHHHHHHhcCcCCCcc-cceecCCceee-CCEEeCCCCEEEecccc
Q 009299          362 HPEVEKKVLAEIDAFGPHDQMPTAHDLQHKFPYLNQVIKEAMRVYLVSPL-VARETSKEVKI-GGYHLPKGTWVWLALGV  439 (538)
Q Consensus       362 ~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~~-~g~~Ip~G~~v~~~~~~  439 (538)
                      ||++|+|+++|++++.++++.++.+++. +|||++|||+||||++|++|. ++|.+.+|+++ +||.|||||.|.++.++
T Consensus       313 ~P~vq~kl~~Ei~~v~~~~~~~~~~~l~-~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a  391 (482)
T PTZ00404        313 YPEIQEKAYNEIKSTVNGRNKVLLSDRQ-STPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYS  391 (482)
T ss_pred             CcHHHHHHHHHHHHHhcCCCCCCccccc-cChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHH
Confidence            9999999999999987765667888886 999999999999999999997 79999999999 99999999999999999


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCchhhhcCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHceeeeCCCCCCCccce
Q 009299          440 LAKDPKNFPEPCKFKPERFDPNCEEEKRRHPYAFIPFGIGPRACIGQKFSLQEIKLSLIQLYRKCVFRHSPNMEKPLELE  519 (538)
Q Consensus       440 ~~~d~~~~~dp~~F~PeR~l~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~  519 (538)
                      +||||++|+||++|+||||++..      ...+|+|||+|+|.|+|++||++|+++++|.++++|+|++.++.+.+....
T Consensus       392 ~hrdp~~~~dP~~F~PeRwl~~~------~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~  465 (482)
T PTZ00404        392 LGRNEKYFENPEQFDPSRFLNPD------SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEE  465 (482)
T ss_pred             hhCCccccCCccccCccccCCCC------CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccc
Confidence            99999999999999999999641      346899999999999999999999999999999999999876543333444


Q ss_pred             eceeeeccCceEEEEEec
Q 009299          520 YGIVLNFKHGVKLTVKNR  537 (538)
Q Consensus       520 ~~~~~~~~~~~~v~~~~r  537 (538)
                      .+++++ +.+++|++++|
T Consensus       466 ~~~~~~-~~~~~v~~~~R  482 (482)
T PTZ00404        466 YGLTLK-PNKFKVLLEKR  482 (482)
T ss_pred             cceeec-CCCceeeeecC
Confidence            566666 67899999987


No 5  
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=9.4e-75  Score=589.27  Aligned_cols=447  Identities=23%  Similarity=0.391  Sum_probs=350.2

Q ss_pred             ccccCCCCCCCCCcccchhhhhcc-------------------CChHHHHHHHHhCCeeEEEeCCccEEEEeCHHHHHHH
Q 009299           47 WKVRRVPGPPAIPLVGHIPLMAKY-------------------GPDVFSILAKRYGPIFRFHMGRQPLIIVADAELCREV  107 (538)
Q Consensus        47 ~~~~~~PgP~~~p~~G~~~~~~~~-------------------~~~~~~~~~~~yG~v~~i~~~~~~~v~v~~p~~i~~i  107 (538)
                      ++.+.+|||+++|++||+.++...                   ....+.+|+++||++|++++|+.++|+++||++++++
T Consensus        39 ~~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~i  118 (516)
T PLN02290         39 MERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKEL  118 (516)
T ss_pred             HHHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHH
Confidence            356789999999999999876421                   1234688999999999999999999999999999999


Q ss_pred             hccccCCCCCCCCCCCCCCCccccCcccccCCccHHHHHhhhcccCChhhHhhhhHhHHHHHHHHHhhccC----C-Ccc
Q 009299          108 GIKKFKDIPNRSIPSPIAASPLHQKGLFFTKNERWSTMRNTILSVYQPSHLASLVPTMQSFIESATQNLDS----T-EDI  182 (538)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~----~-~~v  182 (538)
                      +.++ ..+..++...........|.++++++|+.|+++|++++++|+.++++.+.+.+.++++++++.|.+    + .++
T Consensus       119 l~~~-~~~~~r~~~~~~~~~~~~g~~l~~~~g~~Wk~~Rk~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~v  197 (516)
T PLN02290        119 LTKY-NTVTGKSWLQQQGTKHFIGRGLLMANGADWYHQRHIAAPAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQTEV  197 (516)
T ss_pred             HhcC-CCCCCCcchhhhHHHHHhcCCccccCchHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceE
Confidence            9866 333334321111111234578888999999999999999999999999999999999999998863    2 478


Q ss_pred             chhhhHHHHHHHHHHHhhcccccCCCCCCCCCCCCcccCCCCCcchhhhhHhhhhhhhhhhhhhccchhHHHhhhhhhch
Q 009299          183 TFSDLSLKMATDVIGQAAFGVNFGLSKPQPISDSVTSVDTPANASEVSDFINQHIYSTTQLKMDLSGSLSIILGLLFPII  262 (538)
Q Consensus       183 dl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l  262 (538)
                      |+.+++..+++|++++++||.++...                  ++..+.+.........        .  .....+|+ 
T Consensus       198 d~~~~~~~~~~~vi~~~~fG~~~~~~------------------~~~~~~~~~~~~~~~~--------~--~~~~~~p~-  248 (516)
T PLN02290        198 EIGEYMTRLTADIISRTEFDSSYEKG------------------KQIFHLLTVLQRLCAQ--------A--TRHLCFPG-  248 (516)
T ss_pred             EhHHHHHHHHHHHHHHHHcCCccccc------------------hHHHHHHHHHHHHHHH--------h--hhhhcCch-
Confidence            99999999999999999999876421                  1122222211111000        0  00011221 


Q ss_pred             hhHHHHHhhhcCCCchHHHHHHhHHHHHHHHHHHHHHHHhhC-----CCcchHHHHHHHhchhccccCCCCCHHhHHHHH
Q 009299          263 QEPFRQILKRIPGTMDWKFARTNKNLSGRLEEIVSKRMEETN-----TSSKDFLSLILKARESETASKNIFTPDYISAVT  337 (538)
Q Consensus       263 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~-----~~~~d~l~~ll~~~~~~~~~~~~lt~~~i~~~~  337 (538)
                             ..++|.....+..+..+.+.+++++.|+++++...     ...+|+++.+++..+++...+..++++++.+++
T Consensus       249 -------~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~  321 (516)
T PLN02290        249 -------SRFFPSKYNREIKSLKGEVERLLMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDEC  321 (516)
T ss_pred             -------hhhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHH
Confidence                   11233222334455666777888888887765321     134799999997654322112348899999999


Q ss_pred             HHHHhhchhHHHHHHHHHHHHHhcChHHHHHHHHHHHHcCCCCCCCChhhhhhcCchHHHHHHHHhcCcCCCcccceecC
Q 009299          338 YEHLLAGSATTAFTLSSVVYLVAGHPEVEKKVLAEIDAFGPHDQMPTAHDLQHKFPYLNQVIKEAMRVYLVSPLVARETS  417 (538)
Q Consensus       338 ~~~~~ag~dTts~tl~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~  417 (538)
                      .++++||+|||+++++|++++|++||++|+|+++|++++.+++ .++.+++. +|||++|||+||||++|+++.++|.+.
T Consensus       322 ~~~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~-~lpYl~avi~EtlRl~p~~~~~~R~~~  399 (516)
T PLN02290        322 KTFFFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGGE-TPSVDHLS-KLTLLNMVINESLRLYPPATLLPRMAF  399 (516)
T ss_pred             HHHHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCC-CCCHHHHh-cChHHHHHHHHHHHcCCCccccceeec
Confidence            9999999999999999999999999999999999999987654 67889986 999999999999999999999999999


Q ss_pred             CceeeCCEEeCCCCEEEecccccccCCCCC-CCCCCCCCCCCCCCchhhhcCCCCcccccCCCCCCCcchHHHHHHHHHH
Q 009299          418 KEVKIGGYHLPKGTWVWLALGVLAKDPKNF-PEPCKFKPERFDPNCEEEKRRHPYAFIPFGIGPRACIGQKFSLQEIKLS  496 (538)
Q Consensus       418 ~d~~~~g~~Ip~G~~v~~~~~~~~~d~~~~-~dp~~F~PeR~l~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~  496 (538)
                      +|++++||.|||||.|+++.+++||||++| +||++|+||||+.+.    ......|+|||.|+|.|+|++||++|++++
T Consensus       400 ~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~----~~~~~~~~pFG~G~R~C~G~~lA~~el~l~  475 (516)
T PLN02290        400 EDIKLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGRP----FAPGRHFIPFAAGPRNCIGQAFAMMEAKII  475 (516)
T ss_pred             CCeeECCEEECCCCEEEecHHHhcCChhhhCCChhhcCccccCCCC----CCCCCeEecCCCCCCCCccHHHHHHHHHHH
Confidence            999999999999999999999999999999 899999999999532    112357999999999999999999999999


Q ss_pred             HHHHHHHceeeeCCCCCCCccceeceeeeccCceEEEEEecC
Q 009299          497 LIQLYRKCVFRHSPNMEKPLELEYGIVLNFKHGVKLTVKNRK  538 (538)
Q Consensus       497 la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  538 (538)
                      ++.|+++|+|++.++..  .....++++.|++|++|++++|.
T Consensus       476 la~ll~~f~~~~~~~~~--~~~~~~~~~~p~~~~~~~~~~~~  515 (516)
T PLN02290        476 LAMLISKFSFTISDNYR--HAPVVVLTIKPKYGVQVCLKPLN  515 (516)
T ss_pred             HHHHHHhceEeeCCCcc--cCccceeeecCCCCCeEEEEeCC
Confidence            99999999999876532  22234678899999999999984


No 6  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=7.6e-74  Score=580.68  Aligned_cols=459  Identities=22%  Similarity=0.428  Sum_probs=357.8

Q ss_pred             ccccCCCCCCCCCcccchhhhhc-cCChHHHHHHHHhCCeeEEEeCCccEEEEeCHHHHHHHhccccCCCCCCCCCCCCC
Q 009299           47 WKVRRVPGPPAIPLVGHIPLMAK-YGPDVFSILAKRYGPIFRFHMGRQPLIIVADAELCREVGIKKFKDIPNRSIPSPIA  125 (538)
Q Consensus        47 ~~~~~~PgP~~~p~~G~~~~~~~-~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~  125 (538)
                      ++.+.+|||+++|++||+..+.. ++..++.+++++||++|++++|++++|+++||+++++++.++...|..++......
T Consensus        25 ~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~~  104 (499)
T PLN03234         25 KSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQ  104 (499)
T ss_pred             CCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhhh
Confidence            45677999999999999988754 57788999999999999999999999999999999999987777777776433221


Q ss_pred             CCccccCcc-cccCCccHHHHHhhh-cccCChhhHhhhhHhHHHHHHHHHhhcc----CCCccchhhhHHHHHHHHHHHh
Q 009299          126 ASPLHQKGL-FFTKNERWSTMRNTI-LSVYQPSHLASLVPTMQSFIESATQNLD----STEDITFSDLSLKMATDVIGQA  199 (538)
Q Consensus       126 ~~~~~~~~l-~~~~g~~w~~~R~~~-~~~f~~~~l~~~~~~~~~~~~~~~~~l~----~~~~vdl~~~~~~~~~~vi~~~  199 (538)
                      .....+.++ +...++.|+++|+.+ .+.|+++++..+.+.++++++++++.|.    +++++|+.+++..+++|+++++
T Consensus       105 ~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi~~~  184 (499)
T PLN03234        105 TMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVCRQ  184 (499)
T ss_pred             hhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHHHHH
Confidence            111222232 334578999999985 6899999999999999999999999884    3567999999999999999999


Q ss_pred             hcccccCCCCCCCCCCCCcccCCCCCcchhhhhHhhhhhhhhhhhhhccchhHHHhhhhhhchhhHHHHHhhhcCCCchH
Q 009299          200 AFGVNFGLSKPQPISDSVTSVDTPANASEVSDFINQHIYSTTQLKMDLSGSLSIILGLLFPIIQEPFRQILKRIPGTMDW  279 (538)
Q Consensus       200 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~p~~~~~  279 (538)
                      +||.+++....                 +..++.+.......     ..+.  ..+...+|++..     ...++. ..+
T Consensus       185 ~fG~~~~~~~~-----------------~~~~~~~~~~~~~~-----~~~~--~~~~~~~p~~~~-----~~~l~~-~~~  234 (499)
T PLN03234        185 AFGKRYNEYGT-----------------EMKRFIDILYETQA-----LLGT--LFFSDLFPYFGF-----LDNLTG-LSA  234 (499)
T ss_pred             HhCCcccccch-----------------hHHHHHHHHHHHHH-----HcCC--CcHHHHhhHHHH-----hhhhhh-HHH
Confidence            99988763321                 11222222111100     0000  011223333211     111111 123


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHHhh--CCCcchHHHHHHHhchhccccCCCCCHHhHHHHHHHHHhhchhHHHHHHHHHHH
Q 009299          280 KFARTNKNLSGRLEEIVSKRMEET--NTSSKDFLSLILKARESETASKNIFTPDYISAVTYEHLLAGSATTAFTLSSVVY  357 (538)
Q Consensus       280 ~~~~~~~~~~~~~~~~i~~r~~~~--~~~~~d~l~~ll~~~~~~~~~~~~lt~~~i~~~~~~~~~ag~dTts~tl~~~l~  357 (538)
                      +..+..+.+.++++++|+++++..  +...+|+++.|++..+++.. ...++++++.+++.++++||+|||+++++|+++
T Consensus       235 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~l~~~~~~~~~-~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~  313 (499)
T PLN03234        235 RLKKAFKELDTYLQELLDETLDPNRPKQETESFIDLLMQIYKDQPF-SIKFTHENVKAMILDIVVPGTDTAAAVVVWAMT  313 (499)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccCCCcccHHHHHHHHhhccCc-CCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHH
Confidence            466777888888999998876542  22457999999876543221 124899999999999999999999999999999


Q ss_pred             HHhcChHHHHHHHHHHHHcCCCCCCCChhhhhhcCchHHHHHHHHhcCcCCCcc-cceecCCceeeCCEEeCCCCEEEec
Q 009299          358 LVAGHPEVEKKVLAEIDAFGPHDQMPTAHDLQHKFPYLNQVIKEAMRVYLVSPL-VARETSKEVKIGGYHLPKGTWVWLA  436 (538)
Q Consensus       358 ~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~Ip~G~~v~~~  436 (538)
                      +|++||++|+|+++|++++.++++.++.+++. +|||++|||+|+||++|++|. ++|.+.+|++++||.|||||.|+++
T Consensus       314 ~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~l~-~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~  392 (499)
T PLN03234        314 YLIKYPEAMKKAQDEVRNVIGDKGYVSEEDIP-NLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVN  392 (499)
T ss_pred             HHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHh-cChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEe
Confidence            99999999999999999987766778899986 999999999999999999998 5899999999999999999999999


Q ss_pred             ccccccCCCCC-CCCCCCCCCCCCCCchh-hhcCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHceeeeCCCC-C
Q 009299          437 LGVLAKDPKNF-PEPCKFKPERFDPNCEE-EKRRHPYAFIPFGIGPRACIGQKFSLQEIKLSLIQLYRKCVFRHSPNM-E  513 (538)
Q Consensus       437 ~~~~~~d~~~~-~dp~~F~PeR~l~~~~~-~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~-~  513 (538)
                      .+++||||++| +||++|+||||+++++. ....+..+|+|||+|+|.|+|+++|+.|+++++|.++++|+|++.++. +
T Consensus       393 ~~~~~rd~~~~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~  472 (499)
T PLN03234        393 AWAVSRDTAAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKP  472 (499)
T ss_pred             hHhhhCCcccccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCC
Confidence            99999999999 89999999999975432 112345689999999999999999999999999999999999997753 2


Q ss_pred             CC--ccceeceeeeccCceEEEEEec
Q 009299          514 KP--LELEYGIVLNFKHGVKLTVKNR  537 (538)
Q Consensus       514 ~~--~~~~~~~~~~~~~~~~v~~~~r  537 (538)
                      .+  .....++...|++.+.+.+++|
T Consensus       473 ~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (499)
T PLN03234        473 EDIKMDVMTGLAMHKKEHLVLAPTKH  498 (499)
T ss_pred             CCCCcccccccccccCCCeEEEeecC
Confidence            22  3334577778888888888776


No 7  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=4.9e-74  Score=584.17  Aligned_cols=459  Identities=20%  Similarity=0.308  Sum_probs=344.9

Q ss_pred             ccCCCCCCCCCcccchhhhhccC--ChHHHHHHHHhC-CeeEEEeCCccEEEEeCHHHHHHHhccccCCCCCCCCCCCCC
Q 009299           49 VRRVPGPPAIPLVGHIPLMAKYG--PDVFSILAKRYG-PIFRFHMGRQPLIIVADAELCREVGIKKFKDIPNRSIPSPIA  125 (538)
Q Consensus        49 ~~~~PgP~~~p~~G~~~~~~~~~--~~~~~~~~~~yG-~v~~i~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~  125 (538)
                      .+.||||+++|++||++.+.++.  ..++.+++++|| +||++++|++++|+|+||+++++++.+++..|+.++..... 
T Consensus        56 ~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~~-  134 (543)
T PLN02971         56 HPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYAQ-  134 (543)
T ss_pred             CCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccch-
Confidence            35688999999999998875432  456889999999 89999999999999999999999999888888877642211 


Q ss_pred             CCcccc---CcccccCCccHHHHHhhhcc-cCChhhHhhhhHhHHHHHHHHHhhcc----CCCccchhhhHHHHHHHHHH
Q 009299          126 ASPLHQ---KGLFFTKNERWSTMRNTILS-VYQPSHLASLVPTMQSFIESATQNLD----STEDITFSDLSLKMATDVIG  197 (538)
Q Consensus       126 ~~~~~~---~~l~~~~g~~w~~~R~~~~~-~f~~~~l~~~~~~~~~~~~~~~~~l~----~~~~vdl~~~~~~~~~~vi~  197 (538)
                       ...+.   .+++..+|+.|+++|+++++ .+++..++.+.+.++++++.+.+.+.    +++++|+.+.+..+++++++
T Consensus       135 -~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~  213 (543)
T PLN02971        135 -KILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIK  213 (543)
T ss_pred             -hhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHH
Confidence             11111   23677789999999999975 45555666778888888887777653    35679999999999999999


Q ss_pred             HhhcccccCCCCCCCCCCCCcccCCCCCcchhhhhHhhhhhhhhhhhhhccchhHHHhhhhhhchhhHHHHHhhhcCC-C
Q 009299          198 QAAFGVNFGLSKPQPISDSVTSVDTPANASEVSDFINQHIYSTTQLKMDLSGSLSIILGLLFPIIQEPFRQILKRIPG-T  276 (538)
Q Consensus       198 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~p~-~  276 (538)
                      +++||.++.......            .++...+..+...........    .....+..++|++.        +++. .
T Consensus       214 ~~~fG~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~p~l~--------~~~~~~  269 (543)
T PLN02971        214 RLMFGTRTFSEKTEP------------DGGPTLEDIEHMDAMFEGLGF----TFAFCISDYLPMLT--------GLDLNG  269 (543)
T ss_pred             HHHhCCccccccccc------------ccchhHHHHHHHHHHHHHHHh----ccCCcHHHhCCchh--------hhcccc
Confidence            999998874221000            000011111111111000000    00001223344332        1111 1


Q ss_pred             chHHHHHHhHHHHHHHHHHHHHHHHhh--C--CCcchHHHHHHHhchhccccCCCCCHHhHHHHHHHHHhhchhHHHHHH
Q 009299          277 MDWKFARTNKNLSGRLEEIVSKRMEET--N--TSSKDFLSLILKARESETASKNIFTPDYISAVTYEHLLAGSATTAFTL  352 (538)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~i~~r~~~~--~--~~~~d~l~~ll~~~~~~~~~~~~lt~~~i~~~~~~~~~ag~dTts~tl  352 (538)
                      ..+...+..+.+.+++.++|+++++..  +  ....|+++.|++..++++  +..++++++.+++.++++||+|||++++
T Consensus       270 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~--~~~ls~~~i~~~~~~l~~AG~dTTa~tl  347 (543)
T PLN02971        270 HEKIMRESSAIMDKYHDPIIDERIKMWREGKRTQIEDFLDIFISIKDEAG--QPLLTADEIKPTIKELVMAAPDNPSNAV  347 (543)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCcCHHHHHHhhhcccC--CCCCCHHHHHHhHHHHheeccchHHHHH
Confidence            122334455667777888887765421  1  124799999998653321  1238999999999999999999999999


Q ss_pred             HHHHHHHhcChHHHHHHHHHHHHcCCCCCCCChhhhhhcCchHHHHHHHHhcCcCCCcc-cceecCCceeeCCEEeCCCC
Q 009299          353 SSVVYLVAGHPEVEKKVLAEIDAFGPHDQMPTAHDLQHKFPYLNQVIKEAMRVYLVSPL-VARETSKEVKIGGYHLPKGT  431 (538)
Q Consensus       353 ~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~Ip~G~  431 (538)
                      +|++++|+.||++|+|+++||+++.++++.++.+++. +|||++|||+|+||++|++|. ++|.+.+|++++||.|||||
T Consensus       348 ~~~l~~La~~Pevq~kl~~EI~~v~g~~~~~t~~d~~-~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt  426 (543)
T PLN02971        348 EWAMAEMINKPEILHKAMEEIDRVVGKERFVQESDIP-KLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGS  426 (543)
T ss_pred             HHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhc-cCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCC
Confidence            9999999999999999999999998777788999986 999999999999999999998 89999999999999999999


Q ss_pred             EEEecccccccCCCCCCCCCCCCCCCCCCCchhh-hcCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHceeeeCC
Q 009299          432 WVWLALGVLAKDPKNFPEPCKFKPERFDPNCEEE-KRRHPYAFIPFGIGPRACIGQKFSLQEIKLSLIQLYRKCVFRHSP  510 (538)
Q Consensus       432 ~v~~~~~~~~~d~~~~~dp~~F~PeR~l~~~~~~-~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~  510 (538)
                      .|++++|++||||++|+||++|+||||+++..+. ...++.+|+|||+|+|.|+|++||+.|+++++|+||++|+|++.+
T Consensus       427 ~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~  506 (543)
T PLN02971        427 QVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAG  506 (543)
T ss_pred             EEEECcHHhcCChhhCCCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCC
Confidence            9999999999999999999999999999653221 123456899999999999999999999999999999999999876


Q ss_pred             CC-CCCccceeceeeeccCceEEEEEec
Q 009299          511 NM-EKPLELEYGIVLNFKHGVKLTVKNR  537 (538)
Q Consensus       511 ~~-~~~~~~~~~~~~~~~~~~~v~~~~r  537 (538)
                      +. ..+.....+ ++..+.++++.+++|
T Consensus       507 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~  533 (543)
T PLN02971        507 SETRVELMESSH-DMFLSKPLVMVGELR  533 (543)
T ss_pred             CCCCcchhhhcC-cccccccceeeeeec
Confidence            43 333444445 564566888988887


No 8  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=9.4e-74  Score=576.74  Aligned_cols=476  Identities=20%  Similarity=0.347  Sum_probs=363.8

Q ss_pred             HHHHHHHHHHHHHHHhhcc---ccccCCCCCCCCCcccchhhhhccCChHHHHHHHHhCCeeEEEeCCccEEEEeCHHHH
Q 009299           28 IFTVLAILAGVLGYLYGPY---WKVRRVPGPPAIPLVGHIPLMAKYGPDVFSILAKRYGPIFRFHMGRQPLIIVADAELC  104 (538)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~---~~~~~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~~p~~i  104 (538)
                      -+.+.+++.++..|+.+++   ++.+.||||+++|++|+++.+...++.++.+++++||+||++++|++++|+|+||+++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~   85 (504)
T PLN00110          6 ELAAATLLFFITRFFIRSLLPKPSRKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAA   85 (504)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcccCCCcccCCCCCeeechhhcCCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHH
Confidence            3444444555555554443   3445688999999999988776667788999999999999999999999999999999


Q ss_pred             HHHhccccCCCCCCCCCCCCCCCcc-ccCcccccCCccHHHHHhhhcc-cCChhhHhhhhHhHHHHHHHHHhhcc----C
Q 009299          105 REVGIKKFKDIPNRSIPSPIAASPL-HQKGLFFTKNERWSTMRNTILS-VYQPSHLASLVPTMQSFIESATQNLD----S  178 (538)
Q Consensus       105 ~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~g~~w~~~R~~~~~-~f~~~~l~~~~~~~~~~~~~~~~~l~----~  178 (538)
                      ++++.++...++.++.......... .+.+++..+|+.|+++|+.+++ .|+.+.++.+.+.+.+.+..+++.+.    +
T Consensus        86 ~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~  165 (504)
T PLN00110         86 RAFLKTLDINFSNRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQR  165 (504)
T ss_pred             HHHHHhcchhhcCCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccC
Confidence            9999877767777653221111112 2346777789999999999984 89999999999999888887777664    3


Q ss_pred             CCccchhhhHHHHHHHHHHHhhcccccCCCCCCCCCCCCcccCCCCCcchhhhhHhhhhhhhhhhhhhccchhHHHhhhh
Q 009299          179 TEDITFSDLSLKMATDVIGQAAFGVNFGLSKPQPISDSVTSVDTPANASEVSDFINQHIYSTTQLKMDLSGSLSIILGLL  258 (538)
Q Consensus       179 ~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (538)
                      ++++|+.+++..+++|+++.++||.++.....                .+..++.+........     ...  ..+...
T Consensus       166 g~~~~~~~~~~~~~~~vi~~~~fg~~~~~~~~----------------~~~~~~~~~~~~~~~~-----~~~--~~~~~~  222 (504)
T PLN00110        166 GEPVVVPEMLTFSMANMIGQVILSRRVFETKG----------------SESNEFKDMVVELMTT-----AGY--FNIGDF  222 (504)
T ss_pred             CCcEeHHHHHHHHHHHHHHHHHhCCcccccCc----------------hhHHHHHHHHHHHHHH-----hcc--ccHHHH
Confidence            56789999999999999999999997621111                0111222222111100     000  011123


Q ss_pred             hhchhhHHHHHhhhcCC-CchHHHHHHhHHHHHHHHHHHHHHHHhhC--CCcchHHHHHHHhchhccccCCCCCHHhHHH
Q 009299          259 FPIIQEPFRQILKRIPG-TMDWKFARTNKNLSGRLEEIVSKRMEETN--TSSKDFLSLILKARESETASKNIFTPDYISA  335 (538)
Q Consensus       259 ~p~l~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~i~~r~~~~~--~~~~d~l~~ll~~~~~~~~~~~~lt~~~i~~  335 (538)
                      +|++.        +++. ...++..+..+.+.+++++.++++++...  ....|+++.+++..+.+.  +..++++++.+
T Consensus       223 ~p~l~--------~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~--~~~l~~~~i~~  292 (504)
T PLN00110        223 IPSIA--------WMDIQGIERGMKHLHKKFDKLLTRMIEEHTASAHERKGNPDFLDVVMANQENST--GEKLTLTNIKA  292 (504)
T ss_pred             cchHh--------hhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCChhhHHhhcccccC--CCCCCHHHHHH
Confidence            34321        1111 11233445566677777888877665422  234699999997543221  23499999999


Q ss_pred             HHHHHHhhchhHHHHHHHHHHHHHhcChHHHHHHHHHHHHcCCCCCCCChhhhhhcCchHHHHHHHHhcCcCCCcc-cce
Q 009299          336 VTYEHLLAGSATTAFTLSSVVYLVAGHPEVEKKVLAEIDAFGPHDQMPTAHDLQHKFPYLNQVIKEAMRVYLVSPL-VAR  414 (538)
Q Consensus       336 ~~~~~~~ag~dTts~tl~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~-~~R  414 (538)
                      +++.+++||+|||+++++|++++|++||++|+|+++|++++.++++.++.+++. +|||++|||+||||++|+++. ++|
T Consensus       293 ~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~-~lpyl~avi~EtlRl~p~~~~~~~R  371 (504)
T PLN00110        293 LLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRRLVESDLP-KLPYLQAICKESFRKHPSTPLNLPR  371 (504)
T ss_pred             HHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhh-cChHHHHHHHHHhcCCCCccccccc
Confidence            999999999999999999999999999999999999999987666678888886 999999999999999999998 899


Q ss_pred             ecCCceeeCCEEeCCCCEEEecccccccCCCCCCCCCCCCCCCCCCCchhhhc--CCCCcccccCCCCCCCcchHHHHHH
Q 009299          415 ETSKEVKIGGYHLPKGTWVWLALGVLAKDPKNFPEPCKFKPERFDPNCEEEKR--RHPYAFIPFGIGPRACIGQKFSLQE  492 (538)
Q Consensus       415 ~~~~d~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~dp~~F~PeR~l~~~~~~~~--~~~~~~~pFg~G~r~C~G~~~A~~e  492 (538)
                      .+.+|++++||.|||||.|.++.+++||||++|+||++|+||||++++.....  .....|+|||+|+|.|+|++||+.|
T Consensus       372 ~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e  451 (504)
T PLN00110        372 VSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVL  451 (504)
T ss_pred             ccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHH
Confidence            99999999999999999999999999999999999999999999964322111  1234799999999999999999999


Q ss_pred             HHHHHHHHHHHceeeeCCCCCCCccceeceeeeccCceEEEEEec
Q 009299          493 IKLSLIQLYRKCVFRHSPNMEKPLELEYGIVLNFKHGVKLTVKNR  537 (538)
Q Consensus       493 ~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  537 (538)
                      +++++|.|+++|||++.++.+.+.....++++.|+.++++++++|
T Consensus       452 ~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  496 (504)
T PLN00110        452 VEYILGTLVHSFDWKLPDGVELNMDEAFGLALQKAVPLSAMVTPR  496 (504)
T ss_pred             HHHHHHHHHHhceeecCCCCccCcccccccccccCCCceEeeccC
Confidence            999999999999999877643333334677888999999999998


No 9  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=3.5e-73  Score=576.22  Aligned_cols=457  Identities=24%  Similarity=0.418  Sum_probs=356.5

Q ss_pred             cCCCCCCCCCcccchhhhhccCChHHHHHHHHhCCeeEEEeCCccEEEEeCHHHHHHHhccccCCCCCCCCCCCCCC-Cc
Q 009299           50 RRVPGPPAIPLVGHIPLMAKYGPDVFSILAKRYGPIFRFHMGRQPLIIVADAELCREVGIKKFKDIPNRSIPSPIAA-SP  128 (538)
Q Consensus        50 ~~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~-~~  128 (538)
                      +.||||+++|++||+..+..++...+.+++++||+||++++|++++++++||+++++++.++...|..++....... ..
T Consensus        34 ~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~~~~  113 (517)
T PLN02687         34 PLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEHMAY  113 (517)
T ss_pred             CCCccCCCCCccccHHhcCCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchhhhcc
Confidence            35789999999999988877788899999999999999999999999999999999999877667776643221110 11


Q ss_pred             cccCcccccCCccHHHHHhhhc-ccCChhhHhhhhHhHHHHHHHHHhhccC---CCccchhhhHHHHHHHHHHHhhcccc
Q 009299          129 LHQKGLFFTKNERWSTMRNTIL-SVYQPSHLASLVPTMQSFIESATQNLDS---TEDITFSDLSLKMATDVIGQAAFGVN  204 (538)
Q Consensus       129 ~~~~~l~~~~g~~w~~~R~~~~-~~f~~~~l~~~~~~~~~~~~~~~~~l~~---~~~vdl~~~~~~~~~~vi~~~~fG~~  204 (538)
                      .++.+++..+|+.|+++|++++ ++|+.++++++.+.++++++++++.|.+   ++++|+.+++..+++|+++.++||.+
T Consensus       114 ~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~  193 (517)
T PLN02687        114 NYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQHGTAPVNLGQLVNVCTTNALGRAMVGRR  193 (517)
T ss_pred             CCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHhCcc
Confidence            1233466667999999999998 8999999999999999999999988853   56799999999999999999999998


Q ss_pred             cCCCCCCCCCCCCcccCCCCCcchhhhhHhhhhhhhhhhhhhccchhHHHhhhhhhchhhHHHHHhhhcCC-CchHHHHH
Q 009299          205 FGLSKPQPISDSVTSVDTPANASEVSDFINQHIYSTTQLKMDLSGSLSIILGLLFPIIQEPFRQILKRIPG-TMDWKFAR  283 (538)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~p~-~~~~~~~~  283 (538)
                      +...+.+               +...++.+.......     ..+..  .....+|++.        +++. ....+..+
T Consensus       194 ~~~~~~~---------------~~~~~~~~~~~~~~~-----~~~~~--~~~~~~P~l~--------~l~~~~~~~~~~~  243 (517)
T PLN02687        194 VFAGDGD---------------EKAREFKEMVVELMQ-----LAGVF--NVGDFVPALR--------WLDLQGVVGKMKR  243 (517)
T ss_pred             ccccCCc---------------chHHHHHHHHHHHHH-----HhccC--cHHHHhhhHH--------HhCcccHHHHHHH
Confidence            7543210               111122222111110     00000  0112334221        1111 11234555


Q ss_pred             HhHHHHHHHHHHHHHHHHhhC---CCcchHHHHHHHhchhcc--ccCCCCCHHhHHHHHHHHHhhchhHHHHHHHHHHHH
Q 009299          284 TNKNLSGRLEEIVSKRMEETN---TSSKDFLSLILKARESET--ASKNIFTPDYISAVTYEHLLAGSATTAFTLSSVVYL  358 (538)
Q Consensus       284 ~~~~~~~~~~~~i~~r~~~~~---~~~~d~l~~ll~~~~~~~--~~~~~lt~~~i~~~~~~~~~ag~dTts~tl~~~l~~  358 (538)
                      ..+.+.+++.++++++++...   ....|+++.+++..+++.  ..+..++++++.+++..+++||+|||+++++|++++
T Consensus       244 ~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~  323 (517)
T PLN02687        244 LHRRFDAMMNGIIEEHKAAGQTGSEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAE  323 (517)
T ss_pred             HHHHHHHHHHHHHHHHHHhccccCcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHH
Confidence            667778888899988876532   345799999998754421  112359999999999999999999999999999999


Q ss_pred             HhcChHHHHHHHHHHHHcCCCCCCCChhhhhhcCchHHHHHHHHhcCcCCCcc-cceecCCceeeCCEEeCCCCEEEecc
Q 009299          359 VAGHPEVEKKVLAEIDAFGPHDQMPTAHDLQHKFPYLNQVIKEAMRVYLVSPL-VARETSKEVKIGGYHLPKGTWVWLAL  437 (538)
Q Consensus       359 L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~Ip~G~~v~~~~  437 (538)
                      |+.||++|+|+++|++++.++++.++.+++. +|||++|||+|+||++|+++. ++|.+.+|++++||.|||||.|.++.
T Consensus       324 L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~-~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~  402 (517)
T PLN02687        324 LIRHPDILKKAQEELDAVVGRDRLVSESDLP-QLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNV  402 (517)
T ss_pred             HHhCHHHHHHHHHHHHHHcCCCCCCCHHHhh-hCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEec
Confidence            9999999999999999987666778889986 999999999999999999997 79999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCchhh---hcCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHceeeeCCCCCC
Q 009299          438 GVLAKDPKNFPEPCKFKPERFDPNCEEE---KRRHPYAFIPFGIGPRACIGQKFSLQEIKLSLIQLYRKCVFRHSPNMEK  514 (538)
Q Consensus       438 ~~~~~d~~~~~dp~~F~PeR~l~~~~~~---~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~  514 (538)
                      +++||||++|+||++|+||||++++...   ....+.+|+|||+|+|.|+|++||++|+++++|.||++|+|++.++...
T Consensus       403 ~~~h~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~  482 (517)
T PLN02687        403 WAIARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTP  482 (517)
T ss_pred             HHhcCCcccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCc
Confidence            9999999999999999999999643211   1223458999999999999999999999999999999999998765321


Q ss_pred             -Ccc--ceeceeeeccCceEEEEEec
Q 009299          515 -PLE--LEYGIVLNFKHGVKLTVKNR  537 (538)
Q Consensus       515 -~~~--~~~~~~~~~~~~~~v~~~~r  537 (538)
                       +..  ...+++..+..++++++++|
T Consensus       483 ~~~~~~~~~~~~~~~~~~~~~~~~~R  508 (517)
T PLN02687        483 DKLNMEEAYGLTLQRAVPLMVHPRPR  508 (517)
T ss_pred             ccCCcccccceeeecCCCeEEeeccC
Confidence             222  23455556677899999887


No 10 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=4.2e-74  Score=574.03  Aligned_cols=448  Identities=31%  Similarity=0.513  Sum_probs=350.4

Q ss_pred             cccCCCCCCCCCcccchhhhhcc---CChHHHHHHHHhCCeeEEEeCCccEEEEeCHHHHHHHhccccCCCCCCCCCCCC
Q 009299           48 KVRRVPGPPAIPLVGHIPLMAKY---GPDVFSILAKRYGPIFRFHMGRQPLIIVADAELCREVGIKKFKDIPNRSIPSPI  124 (538)
Q Consensus        48 ~~~~~PgP~~~p~~G~~~~~~~~---~~~~~~~~~~~yG~v~~i~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~  124 (538)
                      +...+|||+++|++|++..+.+.   ...++.++..+||++|+.|+|+.++++++||+.+++|+..+.....+.+.+...
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            34678999999999999887543   335677888999999999999999999999999999996444444443332212


Q ss_pred             CCCccccCcccccCCccHHHHHhhhcccCChhhHhhhhHhHHHHHHHHHhhccC---CCccchhhhHHHHHHHHHHHhhc
Q 009299          125 AASPLHQKGLFFTKNERWSTMRNTILSVYQPSHLASLVPTMQSFIESATQNLDS---TEDITFSDLSLKMATDVIGQAAF  201 (538)
Q Consensus       125 ~~~~~~~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~---~~~vdl~~~~~~~~~~vi~~~~f  201 (538)
                      . ..+.|.|+++++|+.|+++||+++++|+...++.+...+.+.+..+...+..   ++.+|+.+.+.++++|+++++++
T Consensus       113 ~-~~~lG~gll~~~g~~W~~~Rk~~~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~tld~i~~~~~  191 (497)
T KOG0157|consen  113 L-KPWLGDGLLFSDGEKWHKHRKLLTPAFHFEILKSFVPVFIESSLILLLLLELAASGEEVDLQDLLKRLTLDIICKTAM  191 (497)
T ss_pred             H-HHHhcCccccCCchHHHHHHhhccHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEcHHHHHHHHHHHHHHHHhc
Confidence            2 3456679999999999999999999999999999999988888876665543   33399999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCcccCCCCCcchhhhhHhhhhhhhhhhhhhccchhHHHhhhhhhchhhHHHHHhhhcCCCchHHH
Q 009299          202 GVNFGLSKPQPISDSVTSVDTPANASEVSDFINQHIYSTTQLKMDLSGSLSIILGLLFPIIQEPFRQILKRIPGTMDWKF  281 (538)
Q Consensus       202 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~p~~~~~~~  281 (538)
                      |......+.                .+..++..+........          ......|+ .   ..+...+.  ..++.
T Consensus       192 G~~~~~~~~----------------~~~~~~~~a~~~~~~~~----------~~~~~~p~-~---~~~~~~~~--~~~~~  239 (497)
T KOG0157|consen  192 GPESLDAEG----------------PELFEYVQAFDDLTELI----------SKRINLPL-G---TKFLYGLK--SERKL  239 (497)
T ss_pred             CCccccccC----------------CcccHHHHHHHHHHHHH----------HHHHcCch-h---hhHHhhcc--hHHHH
Confidence            922211111                11223333322111111          11222332 1   01111111  45677


Q ss_pred             HHHhHHHHHHHHHHHHHHHHhhC-------CCcchHHHHHHHhchhccccCCCCCHHhHHHHHHHHHhhchhHHHHHHHH
Q 009299          282 ARTNKNLSGRLEEIVSKRMEETN-------TSSKDFLSLILKARESETASKNIFTPDYISAVTYEHLLAGSATTAFTLSS  354 (538)
Q Consensus       282 ~~~~~~~~~~~~~~i~~r~~~~~-------~~~~d~l~~ll~~~~~~~~~~~~lt~~~i~~~~~~~~~ag~dTts~tl~~  354 (538)
                      .++.+.++++++++|++|+++..       ....|+++.+....+      ..++++++.+++.++++||+||||++++|
T Consensus       240 ~~a~~~~~~~~~~iI~~rr~~~~~~~~~~~~~~~d~L~~~~~~~~------~~l~~~~i~d~v~tf~faG~DTTss~ltw  313 (497)
T KOG0157|consen  240 KKARKILHDFLEKIIRERREELEKEGSGEEKKRLDFLDTLLLEED------KPLTDEDIRDEVDTFMFAGHDTTSSALTW  313 (497)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHhcc------CCCCHHHHHHHHHHheeeccchHHHHHHH
Confidence            88899999999999998886421       234677775332221      24999999999999999999999999999


Q ss_pred             HHHHHhcChHHHHHHHHHHHHcCCCCCCC-ChhhhhhcCchHHHHHHHHhcCcCCCcccceecCCceee-CCEEeCCCCE
Q 009299          355 VVYLVAGHPEVEKKVLAEIDAFGPHDQMP-TAHDLQHKFPYLNQVIKEAMRVYLVSPLVARETSKEVKI-GGYHLPKGTW  432 (538)
Q Consensus       355 ~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~-~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~-~g~~Ip~G~~  432 (538)
                      ++++|+.||++|+|+++|++++.+++... ...+. ++|+|+++||+||||||||+|.+.|.+.+|+.+ +||.||||+.
T Consensus       314 ~l~~La~hP~vq~k~~eEi~~i~~~~~~~~~~~~~-~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~  392 (497)
T KOG0157|consen  314 TLWLLAKHPEVQEKLREEVDEILGNRDDKWEVEKL-DQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTN  392 (497)
T ss_pred             HHHHHhcCHHHHHHHHHHHHHHhCCCCCCCChhhh-hhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCE
Confidence            99999999999999999999987643332 22222 259999999999999999999999999999999 5899999999


Q ss_pred             EEecccccccCCCCCC-CCCCCCCCCCCCCchhhhcCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHceeeeCCC
Q 009299          433 VWLALGVLAKDPKNFP-EPCKFKPERFDPNCEEEKRRHPYAFIPFGIGPRACIGQKFSLQEIKLSLIQLYRKCVFRHSPN  511 (538)
Q Consensus       433 v~~~~~~~~~d~~~~~-dp~~F~PeR~l~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~  511 (538)
                      |++++|++||||++|+ ||++|+||||++++... ..++.+|+|||+|+|.|+|++||++|+|++++++|++|+|++..+
T Consensus       393 V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~~~~~-~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~  471 (497)
T KOG0157|consen  393 VLISIYALHRDPRVWGEDPEEFDPERFLDGEEKA-KRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGG  471 (497)
T ss_pred             EEEehHHhccCccccCCChhhcCccccCCCCCcC-CCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCC
Confidence            9999999999999995 99999999999654332 446789999999999999999999999999999999999998776


Q ss_pred             CCCCccceeceeeeccCceEEEEEecC
Q 009299          512 MEKPLELEYGIVLNFKHGVKLTVKNRK  538 (538)
Q Consensus       512 ~~~~~~~~~~~~~~~~~~~~v~~~~r~  538 (538)
                      ..  ......++++|++|++|++++|.
T Consensus       472 ~~--~~~~~~~~l~~~~gl~v~~~~r~  496 (497)
T KOG0157|consen  472 DK--PKPVPELTLRPKNGLKVKLRPRG  496 (497)
T ss_pred             CC--ceeeeEEEEEecCCeEEEEEeCC
Confidence            43  66668999999999999999985


No 11 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=1.6e-73  Score=576.05  Aligned_cols=431  Identities=19%  Similarity=0.323  Sum_probs=335.7

Q ss_pred             ccCCCCCCCCCcccchhhhhc-----cCChHHHHHHHHhCCeeEEEeCCccEEEEeCHHHHHHHhccccCCCCCCCCCCC
Q 009299           49 VRRVPGPPAIPLVGHIPLMAK-----YGPDVFSILAKRYGPIFRFHMGRQPLIIVADAELCREVGIKKFKDIPNRSIPSP  123 (538)
Q Consensus        49 ~~~~PgP~~~p~~G~~~~~~~-----~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~  123 (538)
                      .+.||||+++|++||+..+.+     ....++.+++++||++|++++|++++|+++||++++++++++...+..+. +..
T Consensus        37 ~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~-~~~  115 (490)
T PLN02500         37 FNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSY-PRS  115 (490)
T ss_pred             CCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeC-chH
Confidence            456789999999999765432     23456889999999999999999999999999999999987765554321 111


Q ss_pred             CCCCccccCcccccCCccHHHHHhhhcccCChhhHhh-hhHhHHHHHHHHHhhccCCCccchhhhHHHHHHHHHHHhhcc
Q 009299          124 IAASPLHQKGLFFTKNERWSTMRNTILSVYQPSHLAS-LVPTMQSFIESATQNLDSTEDITFSDLSLKMATDVIGQAAFG  202 (538)
Q Consensus       124 ~~~~~~~~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~-~~~~~~~~~~~~~~~l~~~~~vdl~~~~~~~~~~vi~~~~fG  202 (538)
                      .. ...++.++++.+|+.|+++|+++++.|++.+++. +.+.+.+.+..+++.|.+++.+|+.+.+..+++|++++++||
T Consensus       116 ~~-~~~g~~~~~~~~g~~wr~~Rk~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fg  194 (490)
T PLN02500        116 IG-GILGKWSMLVLVGDMHRDMRSISLNFLSHARLRTHLLKEVERHTLLVLDSWKENSTFSAQDEAKKFTFNLMAKHIMS  194 (490)
T ss_pred             HH-HHhCcccccccCCHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCCCCEEehHHHHHHHHHHHHHHHhC
Confidence            11 1123346888899999999999999999999987 568888888888888877777999999999999999999999


Q ss_pred             cccCCCCCCCCCCCCcccCCCCCcchhhhhHhhhhhhhhhhhhhccchhHHHhhhhhhchhhHHHHHhhhcCCCchHHHH
Q 009299          203 VNFGLSKPQPISDSVTSVDTPANASEVSDFINQHIYSTTQLKMDLSGSLSIILGLLFPIIQEPFRQILKRIPGTMDWKFA  282 (538)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~p~~~~~~~~  282 (538)
                      .+.+..                   +..++...........           .  ..+          ..+|....++..
T Consensus       195 ~~~~~~-------------------~~~~~~~~~~~~~~~~-----------~--~~~----------~~~p~~~~~~~~  232 (490)
T PLN02500        195 MDPGEE-------------------ETEQLKKEYVTFMKGV-----------V--SAP----------LNFPGTAYRKAL  232 (490)
T ss_pred             CCCCch-------------------HHHHHHHHHHHHHhhh-----------h--cch----------hcCCCcccHHHH
Confidence            864321                   0111111111100000           0  000          012222223445


Q ss_pred             HHhHHHHHHHHHHHHHHHHhh--C---CCcchHHHHHHHhchhccccCCCCCHHhHHHHHHHHHhhchhHHHHHHHHHHH
Q 009299          283 RTNKNLSGRLEEIVSKRMEET--N---TSSKDFLSLILKARESETASKNIFTPDYISAVTYEHLLAGSATTAFTLSSVVY  357 (538)
Q Consensus       283 ~~~~~~~~~~~~~i~~r~~~~--~---~~~~d~l~~ll~~~~~~~~~~~~lt~~~i~~~~~~~~~ag~dTts~tl~~~l~  357 (538)
                      +..+.+.+++.+++++++++.  +   ....|+++.+++..        .++++++.+++.++++||+|||+++++|+++
T Consensus       233 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~--------~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~  304 (490)
T PLN02500        233 KSRATILKFIERKMEERIEKLKEEDESVEEDDLLGWVLKHS--------NLSTEQILDLILSLLFAGHETSSVAIALAIF  304 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcccCCCCcchHHHHHHhcc--------CCCHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence            566777788888888765431  1   13468999999631        3899999999999999999999999999999


Q ss_pred             HHhcChHHHHHHHHHHHHcCC-----CCCCCChhhhhhcCchHHHHHHHHhcCcCCCcccceecCCceeeCCEEeCCCCE
Q 009299          358 LVAGHPEVEKKVLAEIDAFGP-----HDQMPTAHDLQHKFPYLNQVIKEAMRVYLVSPLVARETSKEVKIGGYHLPKGTW  432 (538)
Q Consensus       358 ~L~~~P~~~~kl~~Ei~~~~~-----~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~G~~  432 (538)
                      +|++||++|+|+++|++++.+     +++.++.+|+. +|||++|||+|+||++|++|.++|.+.+|++++||.|||||.
T Consensus       305 ~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~-~lpyl~avikEtlRl~P~~~~~~R~~~~d~~~~G~~IPkGt~  383 (490)
T PLN02500        305 FLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYK-KMEFTQCVINETLRLGNVVRFLHRKALKDVRYKGYDIPSGWK  383 (490)
T ss_pred             HHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhc-cCHHHHHHHHHHHhcCCCccCeeeEeCCCceeCCEEECCCCE
Confidence            999999999999999998742     23457889986 999999999999999999999999999999999999999999


Q ss_pred             EEecccccccCCCCCCCCCCCCCCCCCCCchhhh-----cCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHceee
Q 009299          433 VWLALGVLAKDPKNFPEPCKFKPERFDPNCEEEK-----RRHPYAFIPFGIGPRACIGQKFSLQEIKLSLIQLYRKCVFR  507 (538)
Q Consensus       433 v~~~~~~~~~d~~~~~dp~~F~PeR~l~~~~~~~-----~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~  507 (538)
                      |+++.+++||||++|+||++|+||||+++++...     ..++..|+|||+|+|.|+|++||+.|+++++|.|+++|+|+
T Consensus       384 V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~  463 (490)
T PLN02500        384 VLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWE  463 (490)
T ss_pred             EEechhhcccCcccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEE
Confidence            9999999999999999999999999996532211     12456899999999999999999999999999999999999


Q ss_pred             eCCCCCCCccceeceeeeccCceEEEEEe
Q 009299          508 HSPNMEKPLELEYGIVLNFKHGVKLTVKN  536 (538)
Q Consensus       508 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  536 (538)
                      +.++.. ...  .. ...+++|+.|++++
T Consensus       464 ~~~~~~-~~~--~~-~~~~~~~l~~~~~~  488 (490)
T PLN02500        464 LAEADQ-AFA--FP-FVDFPKGLPIRVRR  488 (490)
T ss_pred             EcCCCc-cee--cc-cccCCCCceEEEEe
Confidence            876543 222  12 23556899999986


No 12 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=7.2e-73  Score=574.13  Aligned_cols=457  Identities=22%  Similarity=0.341  Sum_probs=340.4

Q ss_pred             ccccCCCCCCCCCcccchhhhhccC-ChHHHHHHHHhCCeeEEEeCCccEEEEeCHHHHHHHhccccCCCCCCCCCCCCC
Q 009299           47 WKVRRVPGPPAIPLVGHIPLMAKYG-PDVFSILAKRYGPIFRFHMGRQPLIIVADAELCREVGIKKFKDIPNRSIPSPIA  125 (538)
Q Consensus        47 ~~~~~~PgP~~~p~~G~~~~~~~~~-~~~~~~~~~~yG~v~~i~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~  125 (538)
                      ++++.+|||++.|++|++..+.++. ...+.+|+++||+||++++|++++|+|+||+.+++++.++...+..++......
T Consensus        27 ~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~~  106 (503)
T PLN02394         27 KKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFD  106 (503)
T ss_pred             CcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchHh
Confidence            5678899999999999998776543 568899999999999999999999999999999999987666666553221111


Q ss_pred             CC-ccccCcccccCCccHHHHHhhhc-ccCChhhHhhhhHhHHHHHHHHHhhccC-----CCccchhhhHHHHHHHHHHH
Q 009299          126 AS-PLHQKGLFFTKNERWSTMRNTIL-SVYQPSHLASLVPTMQSFIESATQNLDS-----TEDITFSDLSLKMATDVIGQ  198 (538)
Q Consensus       126 ~~-~~~~~~l~~~~g~~w~~~R~~~~-~~f~~~~l~~~~~~~~~~~~~~~~~l~~-----~~~vdl~~~~~~~~~~vi~~  198 (538)
                      .. ..++.+++..+|+.|+++||.+. +.|++++++.+.+.+.++++++++.|.+     ++.+++.+.+..+++|++++
T Consensus       107 ~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi~~  186 (503)
T PLN02394        107 IFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIMYR  186 (503)
T ss_pred             HhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHHHH
Confidence            01 11223467778999999999996 8999999999999999999999888853     33589999999999999999


Q ss_pred             hhcccccCCCCCCCCCCCCcccCCCCCcchhhhhHhhhhhhhhhhhhhccchhHHHhhhhhhchhhHHHHHhhhcCCCch
Q 009299          199 AAFGVNFGLSKPQPISDSVTSVDTPANASEVSDFINQHIYSTTQLKMDLSGSLSIILGLLFPIIQEPFRQILKRIPGTMD  278 (538)
Q Consensus       199 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~p~~~~  278 (538)
                      ++||.+++...+.                ...++ ..........    .......+...+|++...+..+.        
T Consensus       187 ~~fG~~~~~~~~~----------------~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~--------  237 (503)
T PLN02394        187 MMFDRRFESEDDP----------------LFLKL-KALNGERSRL----AQSFEYNYGDFIPILRPFLRGYL--------  237 (503)
T ss_pred             HHhCCCcccccch----------------hHHHH-HHHHHHHHHH----hcccccchhhhchHHHHHhhHHH--------
Confidence            9999988643220                01111 1111100000    00000001122332221111111        


Q ss_pred             HHHHHHhHH-HHHHHHHHHHHHHHhh------CCCcchHHHHHHHhchhccccCCCCCHHhHHHHHHHHHhhchhHHHHH
Q 009299          279 WKFARTNKN-LSGRLEEIVSKRMEET------NTSSKDFLSLILKARESETASKNIFTPDYISAVTYEHLLAGSATTAFT  351 (538)
Q Consensus       279 ~~~~~~~~~-~~~~~~~~i~~r~~~~------~~~~~d~l~~ll~~~~~~~~~~~~lt~~~i~~~~~~~~~ag~dTts~t  351 (538)
                      +...+.... ...+.+..++++++..      .....|+++.|+++.++     ..++++++..++.++++||+|||+++
T Consensus       238 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~-----~~l~~~~i~~~~~~~~~AG~dTTa~t  312 (503)
T PLN02394        238 KICQDVKERRLALFKDYFVDERKKLMSAKGMDKEGLKCAIDHILEAQKK-----GEINEDNVLYIVENINVAAIETTLWS  312 (503)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCcchhhhHHHHHHhcccc-----CCCCHHHHHHHHHHHHHhchhhHHHH
Confidence            011111111 1112233445443321      12347899999986543     23899999999999999999999999


Q ss_pred             HHHHHHHHhcChHHHHHHHHHHHHcCCCCCCCChhhhhhcCchHHHHHHHHhcCcCCCcc-cceecCCceeeCCEEeCCC
Q 009299          352 LSSVVYLVAGHPEVEKKVLAEIDAFGPHDQMPTAHDLQHKFPYLNQVIKEAMRVYLVSPL-VARETSKEVKIGGYHLPKG  430 (538)
Q Consensus       352 l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~Ip~G  430 (538)
                      ++|++++|++||++|+|+++|++++.+.++.++.+++. +|||++|||+|+||++|++|. .+|.+.+|++++||.||||
T Consensus       313 l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~-~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~G  391 (503)
T PLN02394        313 IEWGIAELVNHPEIQKKLRDELDTVLGPGNQVTEPDTH-KLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAE  391 (503)
T ss_pred             HHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHhHHh-hCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCC
Confidence            99999999999999999999999987666667888885 999999999999999999998 5799999999999999999


Q ss_pred             CEEEecccccccCCCCCCCCCCCCCCCCCCCchh-hhcCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHceeeeC
Q 009299          431 TWVWLALGVLAKDPKNFPEPCKFKPERFDPNCEE-EKRRHPYAFIPFGIGPRACIGQKFSLQEIKLSLIQLYRKCVFRHS  509 (538)
Q Consensus       431 ~~v~~~~~~~~~d~~~~~dp~~F~PeR~l~~~~~-~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~  509 (538)
                      |.|.+++|++||||++|+||++|+||||+++++. .......+|+|||+|+|.|+|++||++|+++++|.++++|+|++.
T Consensus       392 t~V~~~~~~~~rd~~~~~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~  471 (503)
T PLN02394        392 SKILVNAWWLANNPELWKNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPP  471 (503)
T ss_pred             CEEEEchHHHhCCcccCCCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeC
Confidence            9999999999999999999999999999965321 122245689999999999999999999999999999999999987


Q ss_pred             CCCC-CCccceec-eeeeccCceEEEEEecC
Q 009299          510 PNME-KPLELEYG-IVLNFKHGVKLTVKNRK  538 (538)
Q Consensus       510 ~~~~-~~~~~~~~-~~~~~~~~~~v~~~~r~  538 (538)
                      ++.+ .+.....+ +.+..+.+.++++.||.
T Consensus       472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  502 (503)
T PLN02394        472 PGQSKIDVSEKGGQFSLHIAKHSTVVFKPRS  502 (503)
T ss_pred             CCCCcCccccccCceeeccCCCceEEeecCC
Confidence            7652 23333343 55556779999999994


No 13 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=8.4e-73  Score=568.61  Aligned_cols=453  Identities=21%  Similarity=0.296  Sum_probs=342.5

Q ss_pred             cccccCCCCCCCCCcccchhhhhccCChH---HHHHHHHhCCeeE---EEeCCccEEEEeCHHHHHHHhccccCCCCCCC
Q 009299           46 YWKVRRVPGPPAIPLVGHIPLMAKYGPDV---FSILAKRYGPIFR---FHMGRQPLIIVADAELCREVGIKKFKDIPNRS  119 (538)
Q Consensus        46 ~~~~~~~PgP~~~p~~G~~~~~~~~~~~~---~~~~~~~yG~v~~---i~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~  119 (538)
                      .|+.+.+|||+++|++||+..+..+...+   +.+...+||..++   +++|+.++++|+||+.+++|+.++...++++.
T Consensus        27 ~~~~~~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~  106 (500)
T PLN02169         27 HKKPHGQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGP  106 (500)
T ss_pred             HhccCCCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcH
Confidence            36677899999999999998776554442   2233344887666   57789999999999999999987766666653


Q ss_pred             CCCCCCCCccccCcccccCCccHHHHHhhhcccCChhhHhhh--hHhHHHHHHHHHhhccC----CCccchhhhHHHHHH
Q 009299          120 IPSPIAASPLHQKGLFFTKNERWSTMRNTILSVYQPSHLASL--VPTMQSFIESATQNLDS----TEDITFSDLSLKMAT  193 (538)
Q Consensus       120 ~~~~~~~~~~~~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~--~~~~~~~~~~~~~~l~~----~~~vdl~~~~~~~~~  193 (538)
                      .....  ....|.|+++++|+.|+++||+++++|+...+..+  .+.+.+.++.+++.+++    ++++|+.+.+.++++
T Consensus       107 ~~~~~--~~~~g~gl~~~~g~~Wr~~Rk~l~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~  184 (500)
T PLN02169        107 EFKKI--FDVLGEGILTVDFELWEDLRKSNHALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMF  184 (500)
T ss_pred             HHHHH--HHhhcCcccccCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHH
Confidence            22211  23457899999999999999999999999887643  35666666666666642    567999999999999


Q ss_pred             HHHHHhhcccccCCCCCCCCCCCCcccCCCCCcchhhhhHhhhhhhhhhhhhhccchhHHHhhhhhhchhhHHHHHhhhc
Q 009299          194 DVIGQAAFGVNFGLSKPQPISDSVTSVDTPANASEVSDFINQHIYSTTQLKMDLSGSLSIILGLLFPIIQEPFRQILKRI  273 (538)
Q Consensus       194 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~  273 (538)
                      |+|++++||.+.+......            ...++.+........             .......|++...   +..++
T Consensus       185 dvi~~~~fG~~~~~~~~~~------------~~~~~~~~~~~~~~~-------------~~~~~~~p~~~~~---~~~~~  236 (500)
T PLN02169        185 DTSSILMTGYDPMSLSIEM------------LEVEFGEAADIGEEA-------------IYYRHFKPVILWR---LQNWI  236 (500)
T ss_pred             HHHHhheeCCCccccCCCC------------CCCHHHHHHHHHHHH-------------HHhHHhccHHHHH---HHHHh
Confidence            9999999998765432100            001122222111100             0111223332111   11223


Q ss_pred             CCCchHHHHHHhHHHHHHHHHHHHHHHHhhC------CCcchHHHHHHHhchhccccCCCCCHHhHHHHHHHHHhhchhH
Q 009299          274 PGTMDWKFARTNKNLSGRLEEIVSKRMEETN------TSSKDFLSLILKARESETASKNIFTPDYISAVTYEHLLAGSAT  347 (538)
Q Consensus       274 p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~------~~~~d~l~~ll~~~~~~~~~~~~lt~~~i~~~~~~~~~ag~dT  347 (538)
                      +....++..+..+.+.+++.++|+++++...      ...+|+++.+++..+.+......++++++.+++.++++||+||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dT  316 (500)
T PLN02169        237 GIGLERKMRTALATVNRMFAKIISSRRKEEISRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDT  316 (500)
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhH
Confidence            3334455677888888999999988765411      1236899999976432111112378999999999999999999


Q ss_pred             HHHHHHHHHHHHhcChHHHHHHHHHHHHcCCCCCCCChhhhhhcCchHHHHHHHHhcCcCCCcccceecCCcee-eCCEE
Q 009299          348 TAFTLSSVVYLVAGHPEVEKKVLAEIDAFGPHDQMPTAHDLQHKFPYLNQVIKEAMRVYLVSPLVARETSKEVK-IGGYH  426 (538)
Q Consensus       348 ts~tl~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~-~~g~~  426 (538)
                      |+++++|++++|+.||++|+|+++|++++.      +.+++. +|||++|||+||||+||++|.+.|.+.+|.+ ++||.
T Consensus       317 Ta~tl~w~l~~La~~Pevq~kl~~Ei~~v~------~~~dl~-~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~  389 (500)
T PLN02169        317 TSSALTWFFWLLSKHPQVMAKIRHEINTKF------DNEDLE-KLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHK  389 (500)
T ss_pred             HHHHHHHHHHHHHCCHHHHHHHHHHHHhhC------CHHHHh-cCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEE
Confidence            999999999999999999999999999864      467776 9999999999999999999998888777755 49999


Q ss_pred             eCCCCEEEecccccccCCCCC-CCCCCCCCCCCCCCchhhhcCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHce
Q 009299          427 LPKGTWVWLALGVLAKDPKNF-PEPCKFKPERFDPNCEEEKRRHPYAFIPFGIGPRACIGQKFSLQEIKLSLIQLYRKCV  505 (538)
Q Consensus       427 Ip~G~~v~~~~~~~~~d~~~~-~dp~~F~PeR~l~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~  505 (538)
                      |||||.|++++|++||||++| +||++|+||||+++++......+.+|+|||+|+|.|+|++||++|+++++|.||++|+
T Consensus       390 IpkGt~v~i~~~~ihrd~~~w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~  469 (500)
T PLN02169        390 VDAESKIVICIYALGRMRSVWGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYD  469 (500)
T ss_pred             ECCCCEEEEcHHHhhCCccccCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCE
Confidence            999999999999999999999 8999999999996533221123678999999999999999999999999999999999


Q ss_pred             eeeCCCCCCCccceeceeeeccCceEEEEEec
Q 009299          506 FRHSPNMEKPLELEYGIVLNFKHGVKLTVKNR  537 (538)
Q Consensus       506 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  537 (538)
                      |++.++.  +.....+.+++|++|+++++++|
T Consensus       470 ~~~~~~~--~~~~~~~~~l~~~~gl~l~l~~~  499 (500)
T PLN02169        470 FKVIEGH--KIEAIPSILLRMKHGLKVTVTKK  499 (500)
T ss_pred             EEEcCCC--CcccccceEEecCCCEEEEEEeC
Confidence            9987653  33445667889999999999988


No 14 
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=6.7e-73  Score=575.41  Aligned_cols=459  Identities=20%  Similarity=0.328  Sum_probs=353.1

Q ss_pred             cccCCCCCCCCCcccchhhhhccCChHHHHHHHHhCCeeEEEeCCccEEEEeCHHHHHHHhccccCCCCCCCCCCCCCCC
Q 009299           48 KVRRVPGPPAIPLVGHIPLMAKYGPDVFSILAKRYGPIFRFHMGRQPLIIVADAELCREVGIKKFKDIPNRSIPSPIAAS  127 (538)
Q Consensus        48 ~~~~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~  127 (538)
                      +.+.+|||+++|++||+..+..++...+.+++++||++|+++++++++++++||+++++++.++.+.++.++........
T Consensus        30 ~~~~ppgp~~~pl~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~~~~~~  109 (514)
T PLN03112         30 SLRLPPGPPRWPIVGNLLQLGPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTLAAVHL  109 (514)
T ss_pred             CCCCccCCCCCCeeeeHHhcCCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCCCcccceee
Confidence            34678899999999999888767788899999999999999999999999999999999998777777766543222111


Q ss_pred             ccc-cCcccccCCccHHHHHhhh-cccCChhhHhhhhHhHHHHHHHHHhhcc----CCCccchhhhHHHHHHHHHHHhhc
Q 009299          128 PLH-QKGLFFTKNERWSTMRNTI-LSVYQPSHLASLVPTMQSFIESATQNLD----STEDITFSDLSLKMATDVIGQAAF  201 (538)
Q Consensus       128 ~~~-~~~l~~~~g~~w~~~R~~~-~~~f~~~~l~~~~~~~~~~~~~~~~~l~----~~~~vdl~~~~~~~~~~vi~~~~f  201 (538)
                      ..+ +.+++..+|+.|+++|+++ .+.|+.++++.+.+.+.+.++.+++.+.    +++++|+.+.+..+++|+++.++|
T Consensus       110 ~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~f  189 (514)
T PLN03112        110 AYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVNLREVLGAFSMNNVTRMLL  189 (514)
T ss_pred             ccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCeeeHHHHHHHHHHHHHHHHHc
Confidence            122 2345667899999999996 5689999999999999999998887653    256799999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCcccCCCCCcchhhhhHhhhhhhhhhhhhhccchhHHHhhhhhhchhhHHHHHhhhcC-CCchHH
Q 009299          202 GVNFGLSKPQPISDSVTSVDTPANASEVSDFINQHIYSTTQLKMDLSGSLSIILGLLFPIIQEPFRQILKRIP-GTMDWK  280 (538)
Q Consensus       202 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~p-~~~~~~  280 (538)
                      |.++......             ..++..++.........     ....  ..+...+|++.        +++ .....+
T Consensus       190 G~~~~~~~~~-------------~~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~p~~~--------~~~~~~~~~~  241 (514)
T PLN03112        190 GKQYFGAESA-------------GPKEAMEFMHITHELFR-----LLGV--IYLGDYLPAWR--------WLDPYGCEKK  241 (514)
T ss_pred             CCcccccccc-------------chHHHHHHHHHHHHHHH-----HcCC--CcHHHhChHHH--------hcCcccHHHH
Confidence            9987432210             00111122221111100     0000  01112233221        111 112234


Q ss_pred             HHHHhHHHHHHHHHHHHHHHHhhC-----CCcchHHHHHHHhchhccccCCCCCHHhHHHHHHHHHhhchhHHHHHHHHH
Q 009299          281 FARTNKNLSGRLEEIVSKRMEETN-----TSSKDFLSLILKARESETASKNIFTPDYISAVTYEHLLAGSATTAFTLSSV  355 (538)
Q Consensus       281 ~~~~~~~~~~~~~~~i~~r~~~~~-----~~~~d~l~~ll~~~~~~~~~~~~lt~~~i~~~~~~~~~ag~dTts~tl~~~  355 (538)
                      ..+..+.+.+++++.++++++..+     ....|+++.++++.++++  +..++++++.+++..+++||+|||+++++|+
T Consensus       242 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~--~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~  319 (514)
T PLN03112        242 MREVEKRVDEFHDKIIDEHRRARSGKLPGGKDMDFVDVLLSLPGENG--KEHMDDVEIKALMQDMIAAATDTSAVTNEWA  319 (514)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccccCCccchHHHHHHHhhcccc--ccCCCHHHHHHHHHHHhccccccHHHHHHHH
Confidence            455666777778888876655321     234699999998654321  2248999999999999999999999999999


Q ss_pred             HHHHhcChHHHHHHHHHHHHcCCCCCCCChhhhhhcCchHHHHHHHHhcCcCCCcc-cceecCCceeeCCEEeCCCCEEE
Q 009299          356 VYLVAGHPEVEKKVLAEIDAFGPHDQMPTAHDLQHKFPYLNQVIKEAMRVYLVSPL-VARETSKEVKIGGYHLPKGTWVW  434 (538)
Q Consensus       356 l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~Ip~G~~v~  434 (538)
                      +++|++||++|+|+++|++++.++++.++.+++. +|||++|||+||||++|++|. ++|.+.+|+.++||.|||||.|.
T Consensus       320 l~~L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~-~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~  398 (514)
T PLN03112        320 MAEVIKNPRVLRKIQEELDSVVGRNRMVQESDLV-HLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVF  398 (514)
T ss_pred             HHHHHhChHHHHHHHHHHHHhcCCCCcCChhhhc-cCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEE
Confidence            9999999999999999999987766678899986 999999999999999999997 68999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCCCCCCCCCCCchh--h-hcCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHceeeeCCC
Q 009299          435 LALGVLAKDPKNFPEPCKFKPERFDPNCEE--E-KRRHPYAFIPFGIGPRACIGQKFSLQEIKLSLIQLYRKCVFRHSPN  511 (538)
Q Consensus       435 ~~~~~~~~d~~~~~dp~~F~PeR~l~~~~~--~-~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~  511 (538)
                      ++.+++||||++|+||++|+||||..+.+.  . ......+|+|||+|+|.|||++||+.|+++++|.+|++|||++.++
T Consensus       399 ~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~  478 (514)
T PLN03112        399 INTHGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDG  478 (514)
T ss_pred             EehHHhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCC
Confidence            999999999999999999999998753211  1 1123458999999999999999999999999999999999998654


Q ss_pred             C-CCC--ccceeceeeeccCceEEEEEec
Q 009299          512 M-EKP--LELEYGIVLNFKHGVKLTVKNR  537 (538)
Q Consensus       512 ~-~~~--~~~~~~~~~~~~~~~~v~~~~r  537 (538)
                      . ..+  .....++++.++++++++++||
T Consensus       479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  507 (514)
T PLN03112        479 LRPEDIDTQEVYGMTMPKAKPLRAVATPR  507 (514)
T ss_pred             CCcccCCCccccCcccccCCCeEEEeecC
Confidence            3 112  2234567777888999999998


No 15 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=1.9e-73  Score=570.76  Aligned_cols=442  Identities=22%  Similarity=0.318  Sum_probs=348.2

Q ss_pred             HHHHHHHhhccccccCCCCCCCCCcccchhhhhccCChHHHHHHHHhCCeeEEEeCCccEEEEeCHHHHHHHhccccCCC
Q 009299           36 AGVLGYLYGPYWKVRRVPGPPAIPLVGHIPLMAKYGPDVFSILAKRYGPIFRFHMGRQPLIIVADAELCREVGIKKFKDI  115 (538)
Q Consensus        36 ~~~~~~~~~~~~~~~~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~~p~~i~~i~~~~~~~~  115 (538)
                      .++..|...++.+.+.+|||+++|++||+..+.+++..++.+++++||++|+++++++++++++||+++++++.++...+
T Consensus        17 ~~~~~~~~~~~~r~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~   96 (463)
T PLN02774         17 SALLRWNEVRYSKKGLPPGTMGWPLFGETTEFLKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGL   96 (463)
T ss_pred             HHHHHHHhhccCCCCCCCCCCCCCchhhHHHHHHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeE
Confidence            33333343443344557899999999999888777778899999999999999999999999999999999998766554


Q ss_pred             CCCCCCCCCCCCccccCcccccCCccHHHHHhhhcccCChhhHhh-hhHhHHHHHHHHHhhccCCCccchhhhHHHHHHH
Q 009299          116 PNRSIPSPIAASPLHQKGLFFTKNERWSTMRNTILSVYQPSHLAS-LVPTMQSFIESATQNLDSTEDITFSDLSLKMATD  194 (538)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~-~~~~~~~~~~~~~~~l~~~~~vdl~~~~~~~~~~  194 (538)
                      .... ..... ..+++.+++..+|+.|+++|+.++++|++..++. +.+.+.+.+++++++|..++++|+.+.+..++++
T Consensus        97 ~~~~-~~~~~-~~lg~~~~~~~~g~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  174 (463)
T PLN02774         97 VPGY-PQSML-DILGTCNIAAVHGSTHRYMRGSLLSLISPTMIRDHLLPKIDEFMRSHLSGWDGLKTIDIQEKTKEMALL  174 (463)
T ss_pred             EecC-CHHHH-HHhCccchhhcCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhCCCCCEEeeHHHHHHHHH
Confidence            3221 11111 1233457888899999999999999999999876 7899999999999999866779999999999999


Q ss_pred             HHHHhhcccccCCCCCCCCCCCCcccCCCCCcchhhhhHhhhhhhhhhhhhhccchhHHHhhhhhhchhhHHHHHhhhcC
Q 009299          195 VIGQAAFGVNFGLSKPQPISDSVTSVDTPANASEVSDFINQHIYSTTQLKMDLSGSLSIILGLLFPIIQEPFRQILKRIP  274 (538)
Q Consensus       195 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~p  274 (538)
                      ++++++||...+..                    ..++........       ...      ..+|          .++|
T Consensus       175 ~~~~~~~g~~~~~~--------------------~~~~~~~~~~~~-------~~~------~~~~----------~~lp  211 (463)
T PLN02774        175 SALKQIAGTLSKPI--------------------SEEFKTEFFKLV-------LGT------LSLP----------IDLP  211 (463)
T ss_pred             HHHHHHcCCCChHH--------------------HHHHHHHHHHHh-------ccc------ccCC----------cCCC
Confidence            99999999743210                    011111110000       000      0011          1233


Q ss_pred             CCchHHHHHHhHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHhchhccccCCCCCHHhHHHHHHHHHhhchhHHHHHHHH
Q 009299          275 GTMDWKFARTNKNLSGRLEEIVSKRMEETNTSSKDFLSLILKARESETASKNIFTPDYISAVTYEHLLAGSATTAFTLSS  354 (538)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~d~l~~ll~~~~~~~~~~~~lt~~~i~~~~~~~~~ag~dTts~tl~~  354 (538)
                      ....++..++.+.+.+++++.|+++.+. ....+|+++.+++...+    +..++++++.+++.++++||+|||+++++|
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~i~~r~~~-~~~~~d~l~~ll~~~~~----~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w  286 (463)
T PLN02774        212 GTNYRSGVQARKNIVRMLRQLIQERRAS-GETHTDMLGYLMRKEGN----RYKLTDEEIIDQIITILYSGYETVSTTSMM  286 (463)
T ss_pred             ChhhhHHHHHHHHHHHHHHHHHHHHHhc-CCCcccHHHHHHhCccC----CCCCCHHHHHHHHHHHHHhcchhHHHHHHH
Confidence            2223445567778888889998887765 33457999999974321    224899999999999999999999999999


Q ss_pred             HHHHHhcChHHHHHHHHHHHHcCCC---CCCCChhhhhhcCchHHHHHHHHhcCcCCCcccceecCCceeeCCEEeCCCC
Q 009299          355 VVYLVAGHPEVEKKVLAEIDAFGPH---DQMPTAHDLQHKFPYLNQVIKEAMRVYLVSPLVARETSKEVKIGGYHLPKGT  431 (538)
Q Consensus       355 ~l~~L~~~P~~~~kl~~Ei~~~~~~---~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~G~  431 (538)
                      ++++|+.||++|+|+++|++++.+.   ++.++.+++. +|||++|||+|+||++|+++.+.|.+.+|++++||.||||+
T Consensus       287 ~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~-~lpyl~a~ikE~lRl~P~v~~~~R~~~~d~~l~g~~IpkGt  365 (463)
T PLN02774        287 AVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWNDYK-SMRFTRAVIFETSRLATIVNGVLRKTTQDMELNGYVIPKGW  365 (463)
T ss_pred             HHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHHHHh-cCcHHHHHHHHHHhcCCCCCCcccccCCCeeECCEEECCCC
Confidence            9999999999999999999987542   3457888986 99999999999999999999889999999999999999999


Q ss_pred             EEEecccccccCCCCCCCCCCCCCCCCCCCchhhhcCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHceeeeCCC
Q 009299          432 WVWLALGVLAKDPKNFPEPCKFKPERFDPNCEEEKRRHPYAFIPFGIGPRACIGQKFSLQEIKLSLIQLYRKCVFRHSPN  511 (538)
Q Consensus       432 ~v~~~~~~~~~d~~~~~dp~~F~PeR~l~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~  511 (538)
                      .|+++.+++||||++|+||++|+||||++++..   . ...|+|||+|+|.|||++||++|+++++|.||++|+|++.++
T Consensus       366 ~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~---~-~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~  441 (463)
T PLN02774        366 RIYVYTREINYDPFLYPDPMTFNPWRWLDKSLE---S-HNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGG  441 (463)
T ss_pred             EEEEehHHhcCCcccCCChhccCchhcCCCCcC---C-CccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCC
Confidence            999999999999999999999999999964321   1 236999999999999999999999999999999999999765


Q ss_pred             CCCCccceeceeeeccCceEEEEEe
Q 009299          512 MEKPLELEYGIVLNFKHGVKLTVKN  536 (538)
Q Consensus       512 ~~~~~~~~~~~~~~~~~~~~v~~~~  536 (538)
                      .+  ..  ...++.|++|++|+++|
T Consensus       442 ~~--~~--~~~~~~p~~g~~~~~~~  462 (463)
T PLN02774        442 DK--LM--KFPRVEAPNGLHIRVSP  462 (463)
T ss_pred             Cc--cc--cCCCCCCCCCceEEeee
Confidence            32  21  22345689999999985


No 16 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=8.1e-73  Score=573.88  Aligned_cols=455  Identities=19%  Similarity=0.324  Sum_probs=347.8

Q ss_pred             cccCCCCCCCCCcccchhhhhc---cCChHHHHHHHHhCCeeEEEeCCccEEEEeCHHHHHHHhccccCCCCCCCCCCCC
Q 009299           48 KVRRVPGPPAIPLVGHIPLMAK---YGPDVFSILAKRYGPIFRFHMGRQPLIIVADAELCREVGIKKFKDIPNRSIPSPI  124 (538)
Q Consensus        48 ~~~~~PgP~~~p~~G~~~~~~~---~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~  124 (538)
                      +.+.+|||+++|++||+..+..   .+...+.+|+++||++|++++|+.++|+++||++++++++++...|+.++.....
T Consensus        33 ~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~~  112 (519)
T PLN00168         33 GRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVASS  112 (519)
T ss_pred             CCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccch
Confidence            3456889999999999876542   3456788999999999999999999999999999999998877777766542211


Q ss_pred             CCCccc-cCcccc--cCCccHHHHHh-hhcccCChhhHhhhhHhHHHHHHHHHhhccC----CCccchhhhHHHHHHHHH
Q 009299          125 AASPLH-QKGLFF--TKNERWSTMRN-TILSVYQPSHLASLVPTMQSFIESATQNLDS----TEDITFSDLSLKMATDVI  196 (538)
Q Consensus       125 ~~~~~~-~~~l~~--~~g~~w~~~R~-~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~----~~~vdl~~~~~~~~~~vi  196 (538)
                        ...+ +.+++.  .+|+.|+++|| +++++|+.++++++.+.+.+.++.+++.|.+    ++.+|+.+.+..++.+++
T Consensus       113 --~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii  190 (519)
T PLN00168        113 --RLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCLL  190 (519)
T ss_pred             --hhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHH
Confidence              1122 123443  67999999987 7899999999999999999999999998864    245789999999999999


Q ss_pred             HHhhcccccCCCCCCCCCCCCcccCCCCCcchhhhhHhhhhhhhhhhhhhccchhHHHhhhhhhchhhHHHHHhhhcCCC
Q 009299          197 GQAAFGVNFGLSKPQPISDSVTSVDTPANASEVSDFINQHIYSTTQLKMDLSGSLSIILGLLFPIIQEPFRQILKRIPGT  276 (538)
Q Consensus       197 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~p~~  276 (538)
                      +.++||.+++...                    .+.+..........   ....  ..+...+|.+...+       ...
T Consensus       191 ~~~~fG~~~~~~~--------------------~~~~~~~~~~~~~~---~~~~--~~~~~~~p~l~~~~-------~~~  238 (519)
T PLN00168        191 VLMCFGERLDEPA--------------------VRAIAAAQRDWLLY---VSKK--MSVFAFFPAVTKHL-------FRG  238 (519)
T ss_pred             HHHHcCCCcChhh--------------------HHHHHHHHHHHHHH---hcCC--CCHHHhCcchhhhh-------hhh
Confidence            9999998775211                    01111111100000   0000  01122344322110       001


Q ss_pred             chHHHHHHhHHHHHHHHHHHHHHHHhhC-----C--------CcchHHHHHHHhchhccccCCCCCHHhHHHHHHHHHhh
Q 009299          277 MDWKFARTNKNLSGRLEEIVSKRMEETN-----T--------SSKDFLSLILKARESETASKNIFTPDYISAVTYEHLLA  343 (538)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~i~~r~~~~~-----~--------~~~d~l~~ll~~~~~~~~~~~~lt~~~i~~~~~~~~~a  343 (538)
                      ...+..+..+.+.+++.++|+++++...     .        ...|+++.|++....+.. +..++++++.+++.++++|
T Consensus       239 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~-~~~lt~~~i~~~~~~l~~A  317 (519)
T PLN00168        239 RLQKALALRRRQKELFVPLIDARREYKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDG-DRALTDDEIVNLCSEFLNA  317 (519)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccccccccccccHHHHHHhhhccccc-cCCCCHHHHHHHHHHHHHh
Confidence            1223445666777788888877654310     0        145899999976432211 2349999999999999999


Q ss_pred             chhHHHHHHHHHHHHHhcChHHHHHHHHHHHHcCCC-CCCCChhhhhhcCchHHHHHHHHhcCcCCCcc-cceecCCcee
Q 009299          344 GSATTAFTLSSVVYLVAGHPEVEKKVLAEIDAFGPH-DQMPTAHDLQHKFPYLNQVIKEAMRVYLVSPL-VARETSKEVK  421 (538)
Q Consensus       344 g~dTts~tl~~~l~~L~~~P~~~~kl~~Ei~~~~~~-~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~  421 (538)
                      |+|||+++++|++++|++||++|+|+++|++++.++ .+.++.+++. +|||++|||+|+||++|+++. ++|.+.+|++
T Consensus       318 G~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~-~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~  396 (519)
T PLN00168        318 GTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGDDQEEVSEEDVH-KMPYLKAVVLEGLRKHPPAHFVLPHKAAEDME  396 (519)
T ss_pred             cchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHhh-CChHHHHHHHHHhhcCCCCcccCCccCCCCcc
Confidence            999999999999999999999999999999998764 3567888886 999999999999999999987 5899999999


Q ss_pred             eCCEEeCCCCEEEecccccccCCCCCCCCCCCCCCCCCCCchh----hhcCCCCcccccCCCCCCCcchHHHHHHHHHHH
Q 009299          422 IGGYHLPKGTWVWLALGVLAKDPKNFPEPCKFKPERFDPNCEE----EKRRHPYAFIPFGIGPRACIGQKFSLQEIKLSL  497 (538)
Q Consensus       422 ~~g~~Ip~G~~v~~~~~~~~~d~~~~~dp~~F~PeR~l~~~~~----~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l  497 (538)
                      ++||.|||||.|.++.+++||||++|+||++|+||||+++...    ....++..|+|||+|+|.|||++||++|+++++
T Consensus       397 ~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~l  476 (519)
T PLN00168        397 VGGYLIPKGATVNFMVAEMGRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFV  476 (519)
T ss_pred             CCCEEECCCCEEEEChHHHhcCccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999964221    111234589999999999999999999999999


Q ss_pred             HHHHHHceeeeCCCCCCCccceeceeeeccCceEEEEEecC
Q 009299          498 IQLYRKCVFRHSPNMEKPLELEYGIVLNFKHGVKLTVKNRK  538 (538)
Q Consensus       498 a~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  538 (538)
                      |.||++|+|++.++.+.+.....+++..+++++++++++|+
T Consensus       477 a~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~  517 (519)
T PLN00168        477 ANMVREFEWKEVPGDEVDFAEKREFTTVMAKPLRARLVPRR  517 (519)
T ss_pred             HHHHHHccceeCCCCcCChhhhceeEEeecCCcEEEEEecc
Confidence            99999999998765433333334567778899999999985


No 17 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=8.8e-73  Score=529.15  Aligned_cols=446  Identities=28%  Similarity=0.471  Sum_probs=362.4

Q ss_pred             ccCCCCCCCCCcccchhhhhccC----ChHHHHHHHHhCCeeEEE-eCCccEEEEeCHHHHHHHhccccCCCCCCC-CCC
Q 009299           49 VRRVPGPPAIPLVGHIPLMAKYG----PDVFSILAKRYGPIFRFH-MGRQPLIIVADAELCREVGIKKFKDIPNRS-IPS  122 (538)
Q Consensus        49 ~~~~PgP~~~p~~G~~~~~~~~~----~~~~~~~~~~yG~v~~i~-~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~-~~~  122 (538)
                      ...+|||+.+|++|.+..+.+.+    ++....++++||+||+.. +|+...|++.+|++++.++..+ ..++.|+ ...
T Consensus        49 ~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~E-G~~P~Rp~~~~  127 (519)
T KOG0159|consen   49 FEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNE-GKYPFRPLLIE  127 (519)
T ss_pred             hhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcC-CCCCCcccccc
Confidence            34689999999999988765544    355667899999999999 8888999999999999998654 4557774 222


Q ss_pred             CCCC-C--ccccCcccccCCccHHHHHhhhcc-cCChhhHhhhhHhHHHHHHHHHhhccC-------CCccchhhhHHHH
Q 009299          123 PIAA-S--PLHQKGLFFTKNERWSTMRNTILS-VYQPSHLASLVPTMQSFIESATQNLDS-------TEDITFSDLSLKM  191 (538)
Q Consensus       123 ~~~~-~--~~~~~~l~~~~g~~w~~~R~~~~~-~f~~~~l~~~~~~~~~~~~~~~~~l~~-------~~~vdl~~~~~~~  191 (538)
                      .+.. .  .....|++..+|+.|.+.|..+++ .++++.++.|.+.+++.++++++.+++       ..+.|+.+.+.++
T Consensus       128 ~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~w  207 (519)
T KOG0159|consen  128 PWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYRW  207 (519)
T ss_pred             hhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHH
Confidence            2221 1  223478999999999999999997 468899999999999999999988864       2357999999999


Q ss_pred             HHHHHHHhhcccccCCCCCCCCCCCCcccCCCCCcchhhhhHhhhhhhhhhhhhhccchhHHHhhhhhhchhhHHHHHhh
Q 009299          192 ATDVIGQAAFGVNFGLSKPQPISDSVTSVDTPANASEVSDFINQHIYSTTQLKMDLSGSLSIILGLLFPIIQEPFRQILK  271 (538)
Q Consensus       192 ~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~  271 (538)
                      +++.||.++||.+.|+...+.          +++.+.+.+.++.++.....             ..+.|       .+.+
T Consensus       208 slEsi~~V~l~~rlG~L~~~~----------~~~a~~fi~ai~~~F~~s~~-------------l~~~p-------~l~r  257 (519)
T KOG0159|consen  208 SLESICLVLLGTRLGLLGESP----------PSEAQQFIDAIKKMFESSAQ-------------LMLMP-------SLWR  257 (519)
T ss_pred             HHHHHHHHHHhcccccccCCC----------CHHHHHHHHHHHHHHHhHHH-------------HHhcc-------hHHH
Confidence            999999999999999987631          11222233333332222111             11222       2334


Q ss_pred             hcCCCchHHHHHHhHHHHHHHHHHHHHHHHhhCCCc------chHHHHHHHhchhccccCCCCCHHhHHHHHHHHHhhch
Q 009299          272 RIPGTMDWKFARTNKNLSGRLEEIVSKRMEETNTSS------KDFLSLILKARESETASKNIFTPDYISAVTYEHLLAGS  345 (538)
Q Consensus       272 ~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~------~d~l~~ll~~~~~~~~~~~~lt~~~i~~~~~~~~~ag~  345 (538)
                      ++++...+++.++.+.+.++.++.|+.+.++.+.+.      .+.+..++..        ..++.+++..+++++++||.
T Consensus       258 ~~~t~~wk~~~~~~D~i~~~~~~~Id~~l~~l~~~~~~~~~~~~~l~~~L~~--------~~l~~k~~~~~~~dll~aGv  329 (519)
T KOG0159|consen  258 YFPTKVWKDFVRAWDQIFDVGDKYIDNALEELEKQDSAGSEYTGSLLELLLR--------KELSRKDAKANVMDLLAAGV  329 (519)
T ss_pred             hCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHH--------ccCCHHHHHHHHHHHHHHhc
Confidence            566666677888888888888888887665532221      2233333322        12899999999999999999


Q ss_pred             hHHHHHHHHHHHHHhcChHHHHHHHHHHHHcCCC-CCCCChhhhhhcCchHHHHHHHHhcCcCCCcccceecCCceeeCC
Q 009299          346 ATTAFTLSSVVYLVAGHPEVEKKVLAEIDAFGPH-DQMPTAHDLQHKFPYLNQVIKEAMRVYLVSPLVARETSKEVKIGG  424 (538)
Q Consensus       346 dTts~tl~~~l~~L~~~P~~~~kl~~Ei~~~~~~-~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g  424 (538)
                      ||||.|+.|+||+|++||++|++|++|+.++.+. +..++.+++. ++|||+||||||+|+||++|+..|...+|++++|
T Consensus       330 DTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p~~~~~~~~~~l~-~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL~g  408 (519)
T KOG0159|consen  330 DTTSNTLLWALYELARNPEVQQRLREEILAVLPSGNSELTQKALT-NMPYLRACIKETLRLYPVVPGNGRVLPKDLVLSG  408 (519)
T ss_pred             cchHHHHHHHHHHHhcChHHHHHHHHHHHhhCCCcccccchHHHh-hCHHHHHHHHhhhceeccccccccccchhceecc
Confidence            9999999999999999999999999999999877 5677788886 9999999999999999999999999999999999


Q ss_pred             EEeCCCCEEEecccccccCCCCCCCCCCCCCCCCCCCchhhhcCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHc
Q 009299          425 YHLPKGTWVWLALGVLAKDPKNFPEPCKFKPERFDPNCEEEKRRHPYAFIPFGIGPRACIGQKFSLQEIKLSLIQLYRKC  504 (538)
Q Consensus       425 ~~Ip~G~~v~~~~~~~~~d~~~~~dp~~F~PeR~l~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f  504 (538)
                      |.|||||.|.++.+.+.+||++|++|++|+|||||+++.  ...++..++|||.|+|.|+||++|++|+-++||.++++|
T Consensus       409 Y~vPagT~V~l~~~~~~r~~~~F~~p~~F~PeRWL~~~~--~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f  486 (519)
T KOG0159|consen  409 YHVPAGTLVVLFLYVLGRNPAYFPDPEEFLPERWLKPST--KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNF  486 (519)
T ss_pred             ceecCCCeEEEeehhhccChhhCCCccccChhhhccccc--CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999998653  456889999999999999999999999999999999999


Q ss_pred             eeeeCCCCCCCccceeceeeeccCceEEEEEecC
Q 009299          505 VFRHSPNMEKPLELEYGIVLNFKHGVKLTVKNRK  538 (538)
Q Consensus       505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  538 (538)
                      +++..++  .|+.....++..|..++.++|++|.
T Consensus       487 ~V~~~~~--~pv~~~~~~il~P~~~l~f~f~~r~  518 (519)
T KOG0159|consen  487 KVEFLHE--EPVEYVYRFILVPNRPLRFKFRPRN  518 (519)
T ss_pred             ceeecCC--CCccceeEEEEcCCCCcceeeeeCC
Confidence            9998665  5688888888999999999999984


No 18 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=1.8e-72  Score=572.07  Aligned_cols=453  Identities=23%  Similarity=0.371  Sum_probs=340.8

Q ss_pred             ccccCCCCCCCCCcccchhhhhccCChHHHHHHHHh---CCeeEEEeCCccEEEEeCHHHHHHHhccccCCCCCCCCCCC
Q 009299           47 WKVRRVPGPPAIPLVGHIPLMAKYGPDVFSILAKRY---GPIFRFHMGRQPLIIVADAELCREVGIKKFKDIPNRSIPSP  123 (538)
Q Consensus        47 ~~~~~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~y---G~v~~i~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~  123 (538)
                      |+.+++|||+++|++||+..+.+. ...+.+|.++|   |++|++++|++++++++||+.+++++.++...+........
T Consensus        27 ~~~~~~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~  105 (516)
T PLN03195         27 WSQRNRKGPKSWPIIGAALEQLKN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHS  105 (516)
T ss_pred             hhccccCCCCCCCeecchHHHHhc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHH
Confidence            455778999999999998665443 44567777787   89999999999999999999999999765445544322110


Q ss_pred             CCCCccccCcccccCCccHHHHHhhhcccCChhhHhhhhHhH-HHHHHHHHhhcc----CCCccchhhhHHHHHHHHHHH
Q 009299          124 IAASPLHQKGLFFTKNERWSTMRNTILSVYQPSHLASLVPTM-QSFIESATQNLD----STEDITFSDLSLKMATDVIGQ  198 (538)
Q Consensus       124 ~~~~~~~~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~-~~~~~~~~~~l~----~~~~vdl~~~~~~~~~~vi~~  198 (538)
                      .. ....+.++++.+|+.|+++|++++++|+.++++.+.+.+ .+.++.+.+.+.    .++++|+.+++..+++|++++
T Consensus       106 ~~-~~~~g~~l~~~~g~~w~~~Rr~l~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~  184 (516)
T PLN03195        106 YM-EVLLGDGIFNVDGELWRKQRKTASFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICK  184 (516)
T ss_pred             HH-HHHhcCeeeccCcHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHH
Confidence            11 123456788889999999999999999999999998876 555666655553    356799999999999999999


Q ss_pred             hhcccccCCCCCCCCCCCCcccCCCCCcchhhhhHhhhhhhhhhhhhhccchhHHHhhhhhhchhhHHHHHhhhcCCCch
Q 009299          199 AAFGVNFGLSKPQPISDSVTSVDTPANASEVSDFINQHIYSTTQLKMDLSGSLSIILGLLFPIIQEPFRQILKRIPGTMD  278 (538)
Q Consensus       199 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~p~~~~  278 (538)
                      ++||.+++..+.+.            ....+.+.+......   .          .+....|..     .+...++....
T Consensus       185 ~~fG~~~~~~~~~~------------~~~~~~~~~~~~~~~---~----------~~~~~~p~~-----~~~~~~~~~~~  234 (516)
T PLN03195        185 VGFGVEIGTLSPSL------------PENPFAQAFDTANII---V----------TLRFIDPLW-----KLKKFLNIGSE  234 (516)
T ss_pred             HHhCCCccccccCC------------CccHHHHHHHHHHHH---H----------HHHHhcchh-----hHHHhcccchH
Confidence            99999887543210            001111111111000   0          000011110     01111111112


Q ss_pred             HHHHHHhHHHHHHHHHHHHHHHHhhC-------CCcchHHHHHHHhchhccccCCCCCHHhHHHHHHHHHhhchhHHHHH
Q 009299          279 WKFARTNKNLSGRLEEIVSKRMEETN-------TSSKDFLSLILKARESETASKNIFTPDYISAVTYEHLLAGSATTAFT  351 (538)
Q Consensus       279 ~~~~~~~~~~~~~~~~~i~~r~~~~~-------~~~~d~l~~ll~~~~~~~~~~~~lt~~~i~~~~~~~~~ag~dTts~t  351 (538)
                      ....+..+.+.+++++++++++++..       ...+|+++.+++..+++   +..++++++.++++++++||+|||+++
T Consensus       235 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~---~~~l~~~~i~~~~~~ll~AG~dTTa~t  311 (516)
T PLN03195        235 ALLSKSIKVVDDFTYSVIRRRKAEMDEARKSGKKVKHDILSRFIELGEDP---DSNFTDKSLRDIVLNFVIAGRDTTATT  311 (516)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccHHHHHHhccCCC---CCCCCHHHHHHHHHHHHHHhhHhHHHH
Confidence            23345566677778888877654311       13568999999764332   124899999999999999999999999


Q ss_pred             HHHHHHHHhcChHHHHHHHHHHHHcCCC--------------------CCCCChhhhhhcCchHHHHHHHHhcCcCCCcc
Q 009299          352 LSSVVYLVAGHPEVEKKVLAEIDAFGPH--------------------DQMPTAHDLQHKFPYLNQVIKEAMRVYLVSPL  411 (538)
Q Consensus       352 l~~~l~~L~~~P~~~~kl~~Ei~~~~~~--------------------~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~  411 (538)
                      ++|++++|+.||++|+|+++|++++.++                    ++.++.+++. +|||++|||+||||++|++|.
T Consensus       312 l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~Lpyl~Avi~EtLRl~p~~p~  390 (516)
T PLN03195        312 LSWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLG-KLQYLHAVITETLRLYPAVPQ  390 (516)
T ss_pred             HHHHHHHHhcCHHHHHHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHh-cCHHHHHHHHHHhhcCCCCcc
Confidence            9999999999999999999999986532                    2457888886 999999999999999999999


Q ss_pred             cceecCCceee-CCEEeCCCCEEEecccccccCCCCC-CCCCCCCCCCCCCCchhhhcCCCCcccccCCCCCCCcchHHH
Q 009299          412 VARETSKEVKI-GGYHLPKGTWVWLALGVLAKDPKNF-PEPCKFKPERFDPNCEEEKRRHPYAFIPFGIGPRACIGQKFS  489 (538)
Q Consensus       412 ~~R~~~~d~~~-~g~~Ip~G~~v~~~~~~~~~d~~~~-~dp~~F~PeR~l~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A  489 (538)
                      ..|.+.+|.++ +||.|||||.|.++.+++||||++| +||++|+||||++++. .....+..|+|||+|+|.|+|++||
T Consensus       391 ~~r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~-~~~~~~~~~~pFG~G~R~CiG~~lA  469 (516)
T PLN03195        391 DPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGV-FQNASPFKFTAFQAGPRICLGKDSA  469 (516)
T ss_pred             hhhhhccCcCcCCCcEECCCCEEEEehHhhccChhhhccChhhcCCcccCCCCC-cCCCCCceEeccCCCCCcCcCHHHH
Confidence            88878777665 9999999999999999999999999 9999999999996421 1122456799999999999999999


Q ss_pred             HHHHHHHHHHHHHHceeeeCCCCCCCccceeceeeeccCceEEEEEecC
Q 009299          490 LQEIKLSLIQLYRKCVFRHSPNMEKPLELEYGIVLNFKHGVKLTVKNRK  538 (538)
Q Consensus       490 ~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  538 (538)
                      ++|+++++|.++++|+|++.++.  +.......++.|++|++|++++|.
T Consensus       470 ~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        470 YLQMKMALALLCRFFKFQLVPGH--PVKYRMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             HHHHHHHHHHHHHhceeEecCCC--cceeeeeeEEecCCCEEEEEEeCC
Confidence            99999999999999999987653  344445567889999999999984


No 19 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=1.2e-71  Score=563.46  Aligned_cols=465  Identities=22%  Similarity=0.419  Sum_probs=341.8

Q ss_pred             HHHHhhccccccCCCCCCCCCcccchhhhh-ccCChHHHHHHHHhCCeeEEEeCCccEEEEeCHHHHHHHhccccCCCCC
Q 009299           39 LGYLYGPYWKVRRVPGPPAIPLVGHIPLMA-KYGPDVFSILAKRYGPIFRFHMGRQPLIIVADAELCREVGIKKFKDIPN  117 (538)
Q Consensus        39 ~~~~~~~~~~~~~~PgP~~~p~~G~~~~~~-~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~~p~~i~~i~~~~~~~~~~  117 (538)
                      ++|.+....+.+.||||+++|++||+..+. .++...+.+|+++||++|+++++++++|+++||+.+++++.++...+.+
T Consensus        18 ~~~~~~~~~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~   97 (502)
T PLN02966         18 FLYQKPKTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFAD   97 (502)
T ss_pred             HHHhccccCCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccC
Confidence            334443334456789999999999998774 3577899999999999999999999999999999999999876655655


Q ss_pred             CCCCCCCCCCccccCcc-cccCCccHHHHHhh-hcccCChhhHhhhhHhHHHHHHHHHhhccC----CCccchhhhHHHH
Q 009299          118 RSIPSPIAASPLHQKGL-FFTKNERWSTMRNT-ILSVYQPSHLASLVPTMQSFIESATQNLDS----TEDITFSDLSLKM  191 (538)
Q Consensus       118 ~~~~~~~~~~~~~~~~l-~~~~g~~w~~~R~~-~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~----~~~vdl~~~~~~~  191 (538)
                      ++..........+..++ +..+|+.|+++|+. ++++|+..++..+.+.+.+.++++++.|.+    ++++|+.+++..+
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~  177 (502)
T PLN02966         98 RPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTF  177 (502)
T ss_pred             CCCCccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHH
Confidence            43222111111122223 45569999999998 789999999999999999999999998853    4579999999999


Q ss_pred             HHHHHHHhhcccccCCCCCCCCCCCCcccCCCCCcchhhhhHhhhhhhhhhhhhhccchhHHHhhhhhhchhhHHHHHhh
Q 009299          192 ATDVIGQAAFGVNFGLSKPQPISDSVTSVDTPANASEVSDFINQHIYSTTQLKMDLSGSLSIILGLLFPIIQEPFRQILK  271 (538)
Q Consensus       192 ~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~  271 (538)
                      ++|+++.++||.+++....                 +..++.+.......     ....  ..+...+|++..     +.
T Consensus       178 t~dvi~~~~fG~~~~~~~~-----------------~~~~~~~~~~~~~~-----~~~~--~~~~~~~p~~~~-----~~  228 (502)
T PLN02966        178 TNSVVCRQAFGKKYNEDGE-----------------EMKRFIKILYGTQS-----VLGK--IFFSDFFPYCGF-----LD  228 (502)
T ss_pred             HHHHHHHHHhCCccCccch-----------------HHHHHHHHHHHHHH-----HhCc--ccHHHhhchhhh-----hh
Confidence            9999999999998864321                 12222221111000     0000  011122332210     01


Q ss_pred             hcCCCchHHHHHHhHHHHHHHHHHHHHHHHhh--CCCcchHHHHHHHhchhccccCCCCCHHhHHHHHHHHHhhchhHHH
Q 009299          272 RIPGTMDWKFARTNKNLSGRLEEIVSKRMEET--NTSSKDFLSLILKARESETASKNIFTPDYISAVTYEHLLAGSATTA  349 (538)
Q Consensus       272 ~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~--~~~~~d~l~~ll~~~~~~~~~~~~lt~~~i~~~~~~~~~ag~dTts  349 (538)
                      .++. .........+...+++++.++++.+..  ..+..|+++.|++..+++.. +..++++++.++++++++||+|||+
T Consensus       229 ~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~l~~~~~~~~~-~~~l~~~~i~~~~~~l~~AG~eTta  306 (502)
T PLN02966        229 DLSG-LTAYMKECFERQDTYIQEVVNETLDPKRVKPETESMIDLLMEIYKEQPF-ASEFTVDNVKAVILDIVVAGTDTAA  306 (502)
T ss_pred             hhcc-HHHHHHHHHHHHHHHHHHHHHHHHhccccccccccHHHHHHHHHhccCc-CCCCCHHHHHHHHHHHHhccccchH
Confidence            1111 011122233445555666665543321  12346899999976544311 2348999999999999999999999


Q ss_pred             HHHHHHHHHHhcChHHHHHHHHHHHHcCCC--CCCCChhhhhhcCchHHHHHHHHhcCcCCCcc-cceecCCceeeCCEE
Q 009299          350 FTLSSVVYLVAGHPEVEKKVLAEIDAFGPH--DQMPTAHDLQHKFPYLNQVIKEAMRVYLVSPL-VARETSKEVKIGGYH  426 (538)
Q Consensus       350 ~tl~~~l~~L~~~P~~~~kl~~Ei~~~~~~--~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~  426 (538)
                      ++++|++++|++||++|+|+++|++++.+.  ++.++.+++. +|||++|||+|+||++|++|. ++|.+.+|++++||.
T Consensus       307 ~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~dl~-~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~  385 (502)
T PLN02966        307 AAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVK-NLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYD  385 (502)
T ss_pred             HHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCCCcCCHhhcc-CCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEE
Confidence            999999999999999999999999998653  2356888886 999999999999999999998 689999999999999


Q ss_pred             eCCCCEEEecccccccCCCCC-CCCCCCCCCCCCCCchhhhcCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHce
Q 009299          427 LPKGTWVWLALGVLAKDPKNF-PEPCKFKPERFDPNCEEEKRRHPYAFIPFGIGPRACIGQKFSLQEIKLSLIQLYRKCV  505 (538)
Q Consensus       427 Ip~G~~v~~~~~~~~~d~~~~-~dp~~F~PeR~l~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~  505 (538)
                      |||||.|.++++++||||++| +||++|+||||++++.. ...++..|+|||+|+|.|+|++||++|+++++|.+|++|+
T Consensus       386 IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl~~~~~-~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~  464 (502)
T PLN02966        386 IPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVD-FKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFN  464 (502)
T ss_pred             ECCCCEEEEecccccCCcccccCChhhCChhhhcCCCCC-cCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhce
Confidence            999999999999999999999 99999999999964321 1224568999999999999999999999999999999999


Q ss_pred             eeeCCCCCC-Cc--cceeceeeeccCceEEEEEecC
Q 009299          506 FRHSPNMEK-PL--ELEYGIVLNFKHGVKLTVKNRK  538 (538)
Q Consensus       506 ~~~~~~~~~-~~--~~~~~~~~~~~~~~~v~~~~r~  538 (538)
                      |++.++... .+  +...++...++ + .+++++||
T Consensus       465 i~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~  498 (502)
T PLN02966        465 FKLPNGMKPDDINMDVMTGLAMHKS-Q-HLKLVPEK  498 (502)
T ss_pred             eeCCCCCCcccCCcccccCeeeccC-C-CeEEEEEe
Confidence            998766422 12  22335444333 3 44565554


No 20 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=1.9e-71  Score=555.67  Aligned_cols=425  Identities=23%  Similarity=0.364  Sum_probs=341.1

Q ss_pred             ccCCCCCCCCCcccchhhh-hccCChHHHHHHHHhCCeeEEEeCCccEEEEeCHHHHHHHhccccCCCCCCCCCCCCCCC
Q 009299           49 VRRVPGPPAIPLVGHIPLM-AKYGPDVFSILAKRYGPIFRFHMGRQPLIIVADAELCREVGIKKFKDIPNRSIPSPIAAS  127 (538)
Q Consensus        49 ~~~~PgP~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~  127 (538)
                      ...||||+++|++||+..+ .+++..++.+++++||++|+++++++++|+++||+++++++.++.+.+.  +........
T Consensus        34 ~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~--~~~~~~~~~  111 (463)
T PLN02196         34 LPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFK--PTFPASKER  111 (463)
T ss_pred             CCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccc--ccCchHHHH
Confidence            3456677779999998765 4567788999999999999999999999999999999999977655442  211111111


Q ss_pred             ccccCcccccCCccHHHHHhhhcccCChhhHhhhhHhHHHHHHHHHhhccCCCccchhhhHHHHHHHHHHHhhcccccCC
Q 009299          128 PLHQKGLFFTKNERWSTMRNTILSVYQPSHLASLVPTMQSFIESATQNLDSTEDITFSDLSLKMATDVIGQAAFGVNFGL  207 (538)
Q Consensus       128 ~~~~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~  207 (538)
                      ..++.++++.+|+.|+++|+++++.|++++++.+.+.+.+.++++++.|. ++.+|+.+++..+++++++.++||.+...
T Consensus       112 ~~g~~~l~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~i~~~~~~~~~~~~-~~~v~~~~~~~~~~~~v~~~~~fG~~~~~  190 (463)
T PLN02196        112 MLGKQAIFFHQGDYHAKLRKLVLRAFMPDAIRNMVPDIESIAQESLNSWE-GTQINTYQEMKTYTFNVALLSIFGKDEVL  190 (463)
T ss_pred             HcCcccccccCcHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHcCC-CCeEEeHHHHHHHHHHHHHHHHcCCCCch
Confidence            23335788889999999999999999999999999999999999999986 45789999999999999999999986421


Q ss_pred             CCCCCCCCCCcccCCCCCcchhhhhHhhhhhhhhhhhhhccchhHHHhhhhhhchhhHHHHHhhhcCCCchHHHHHHhHH
Q 009299          208 SKPQPISDSVTSVDTPANASEVSDFINQHIYSTTQLKMDLSGSLSIILGLLFPIIQEPFRQILKRIPGTMDWKFARTNKN  287 (538)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~p~~~~~~~~~~~~~  287 (538)
                      ..                 +.+.+....    ..       ..     ...+|+          .+|....++..++.+.
T Consensus       191 ~~-----------------~~~~~~~~~----~~-------~~-----~~~~~~----------~~p~~~~~~~~~a~~~  227 (463)
T PLN02196        191 YR-----------------EDLKRCYYI----LE-------KG-----YNSMPI----------NLPGTLFHKSMKARKE  227 (463)
T ss_pred             HH-----------------HHHHHHHHH----Hh-------cc-----hhcccc----------cCCCccchHHHHHHHH
Confidence            00                 001111100    00       00     001121          1232223455667778


Q ss_pred             HHHHHHHHHHHHHHhhCCCcchHHHHHHHhchhccccCCCCCHHhHHHHHHHHHhhchhHHHHHHHHHHHHHhcChHHHH
Q 009299          288 LSGRLEEIVSKRMEETNTSSKDFLSLILKARESETASKNIFTPDYISAVTYEHLLAGSATTAFTLSSVVYLVAGHPEVEK  367 (538)
Q Consensus       288 ~~~~~~~~i~~r~~~~~~~~~d~l~~ll~~~~~~~~~~~~lt~~~i~~~~~~~~~ag~dTts~tl~~~l~~L~~~P~~~~  367 (538)
                      +.+++.+.|++++++ .....|+++.+++..       ..++++++.++++.+++||+|||+++++|++++|++||++|+
T Consensus       228 ~~~~~~~~i~~~~~~-~~~~~d~l~~ll~~~-------~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~  299 (463)
T PLN02196        228 LAQILAKILSKRRQN-GSSHNDLLGSFMGDK-------EGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLE  299 (463)
T ss_pred             HHHHHHHHHHHHhhc-CCCcccHHHHHHhcC-------CCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHH
Confidence            888888888877654 334678999988521       238999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCC---CCCCChhhhhhcCchHHHHHHHHhcCcCCCcccceecCCceeeCCEEeCCCCEEEecccccccCC
Q 009299          368 KVLAEIDAFGPH---DQMPTAHDLQHKFPYLNQVIKEAMRVYLVSPLVARETSKEVKIGGYHLPKGTWVWLALGVLAKDP  444 (538)
Q Consensus       368 kl~~Ei~~~~~~---~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~G~~v~~~~~~~~~d~  444 (538)
                      |+++|++++.+.   ++.++.+++. ++||++|||+|+||++|+++.+.|.+.+|++++||.|||||.|+++++++||||
T Consensus       300 kl~~Ei~~~~~~~~~~~~~~~~~~~-~l~yl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~  378 (463)
T PLN02196        300 AVTEEQMAIRKDKEEGESLTWEDTK-KMPLTSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSA  378 (463)
T ss_pred             HHHHHHHHHhcccccCCCCCHHHHh-cChHHHHHHHHHHhcCCCccccceeeccccccCCEEeCCCCEEEeeHHHhcCCc
Confidence            999999987542   4557888886 999999999999999999999889999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCchhhhcCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHceeeeCCCCCCCccceeceee
Q 009299          445 KNFPEPCKFKPERFDPNCEEEKRRHPYAFIPFGIGPRACIGQKFSLQEIKLSLIQLYRKCVFRHSPNMEKPLELEYGIVL  524 (538)
Q Consensus       445 ~~~~dp~~F~PeR~l~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~  524 (538)
                      ++|+||++|+||||+++.      .+..|+|||+|+|.|+|+++|+.|+++++|.|+++|+|++.++.   .......+.
T Consensus       379 ~~~~dP~~F~PeRfl~~~------~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~  449 (463)
T PLN02196        379 DIFSDPGKFDPSRFEVAP------KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTS---NGIQYGPFA  449 (463)
T ss_pred             hhcCCcCccChhhhcCCC------CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCC---CceEEcccc
Confidence            999999999999999531      34689999999999999999999999999999999999987652   233456567


Q ss_pred             eccCceEEEEEec
Q 009299          525 NFKHGVKLTVKNR  537 (538)
Q Consensus       525 ~~~~~~~v~~~~r  537 (538)
                      .|++|+.|+++..
T Consensus       450 ~p~~~~~~~~~~~  462 (463)
T PLN02196        450 LPQNGLPIALSRK  462 (463)
T ss_pred             cCCCCceEEEecC
Confidence            7999999998753


No 21 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=6.6e-71  Score=552.82  Aligned_cols=447  Identities=19%  Similarity=0.359  Sum_probs=339.0

Q ss_pred             CCCCCCCCcccchhhhhc-cCChHHHHHHHHhCCeeEEEeCCccEEEEeCHHHHHHHhccccCCCCCCCCCCCCCCCccc
Q 009299           52 VPGPPAIPLVGHIPLMAK-YGPDVFSILAKRYGPIFRFHMGRQPLIIVADAELCREVGIKKFKDIPNRSIPSPIAASPLH  130 (538)
Q Consensus        52 ~PgP~~~p~~G~~~~~~~-~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~  130 (538)
                      ||||+++|++||++++.. +++..+.+|+++||+||+++++++++|+|+||+++++++.++...|+.++.....  ..+.
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~--~~~~   78 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKAL--TVLT   78 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHH--HHHh
Confidence            689999999999988754 4678999999999999999999999999999999999998887788776543221  1122


Q ss_pred             c--Cccccc-CCccHHHHHhhhc-ccCChhhHhhhhHhHHHHHHHHHhhcc------CCCccchhhhHHHHHHHHHHHhh
Q 009299          131 Q--KGLFFT-KNERWSTMRNTIL-SVYQPSHLASLVPTMQSFIESATQNLD------STEDITFSDLSLKMATDVIGQAA  200 (538)
Q Consensus       131 ~--~~l~~~-~g~~w~~~R~~~~-~~f~~~~l~~~~~~~~~~~~~~~~~l~------~~~~vdl~~~~~~~~~~vi~~~~  200 (538)
                      +  .+++.. +|+.|+++|+.+. +.|+...++.+.+.+.+.++.+++.+.      .++++|+.+.+..+++|+++.++
T Consensus        79 ~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~  158 (466)
T PLN02655         79 RDKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQA  158 (466)
T ss_pred             cCCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHH
Confidence            2  234554 4899999998665 567777778888777777666665553      24678999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCcccCCCCCcchh--hhhHhhhhhhhhhhhhhccchhHHHhhhhhhchhhHHHHHhhhcCCC-c
Q 009299          201 FGVNFGLSKPQPISDSVTSVDTPANASEV--SDFINQHIYSTTQLKMDLSGSLSIILGLLFPIIQEPFRQILKRIPGT-M  277 (538)
Q Consensus       201 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~p~~-~  277 (538)
                      ||.+++.......            .+.+  .+.+.......    +....  ...+...+|.+        .+++.. .
T Consensus       159 fG~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~p~l--------~~~~~~~~  212 (466)
T PLN02655        159 LGEDVESVYVEEL------------GTEISKEEIFDVLVHDM----MMCAI--EVDWRDFFPYL--------SWIPNKSF  212 (466)
T ss_pred             hcccccccccccc------------ccchhhHHHHHHHHHHH----HHHhC--Ccchhhhhhhh--------hhcCchhH
Confidence            9998765432100            0000  01011000000    00000  00112233322        122221 1


Q ss_pred             hHHHHHHhHHHHHHHHHHHHHHHHhh--CCCcchHHHHHHHhchhccccCCCCCHHhHHHHHHHHHhhchhHHHHHHHHH
Q 009299          278 DWKFARTNKNLSGRLEEIVSKRMEET--NTSSKDFLSLILKARESETASKNIFTPDYISAVTYEHLLAGSATTAFTLSSV  355 (538)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~i~~r~~~~--~~~~~d~l~~ll~~~~~~~~~~~~lt~~~i~~~~~~~~~ag~dTts~tl~~~  355 (538)
                      .....+....+.++++++++++++..  +....|+++.+++..       ..++++++.+++.++++||+|||+++++|+
T Consensus       213 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~-------~~ls~~~i~~~~~~~~~ag~dtta~~l~~~  285 (466)
T PLN02655        213 ETRVQTTEFRRTAVMKALIKQQKKRIARGEERDCYLDFLLSEA-------THLTDEQLMMLVWEPIIEAADTTLVTTEWA  285 (466)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHHhcc-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            12222233344567777777665431  223468999999753       138999999999999999999999999999


Q ss_pred             HHHHhcChHHHHHHHHHHHHcCCCCCCCChhhhhhcCchHHHHHHHHhcCcCCCccc-ceecCCceeeCCEEeCCCCEEE
Q 009299          356 VYLVAGHPEVEKKVLAEIDAFGPHDQMPTAHDLQHKFPYLNQVIKEAMRVYLVSPLV-ARETSKEVKIGGYHLPKGTWVW  434 (538)
Q Consensus       356 l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~~~g~~Ip~G~~v~  434 (538)
                      +++|+.||++|+|+++|++++.+++. ++.+++. ++||++|||+||||++|+++.. +|.+.+|++++||.|||||.|+
T Consensus       286 ~~~l~~~p~~~~~l~~Ei~~~~~~~~-~~~~~l~-~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~  363 (466)
T PLN02655        286 MYELAKNPDKQERLYREIREVCGDER-VTEEDLP-NLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIA  363 (466)
T ss_pred             HHHHHcCHHHHHHHHHHHHHHhCCCC-CCHHHHh-cChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEE
Confidence            99999999999999999999876544 8888986 9999999999999999999984 7999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCCCCCCCCCCCchhhhcCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHceeeeCCCCCC
Q 009299          435 LALGVLAKDPKNFPEPCKFKPERFDPNCEEEKRRHPYAFIPFGIGPRACIGQKFSLQEIKLSLIQLYRKCVFRHSPNMEK  514 (538)
Q Consensus       435 ~~~~~~~~d~~~~~dp~~F~PeR~l~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~  514 (538)
                      ++.+++||||++|+||++|+||||++++..  ......|+|||+|+|.|||++||+.|+++++|+||++|+|++.++.. 
T Consensus       364 ~~~~~~~~d~~~~~~p~~F~PeR~~~~~~~--~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-  440 (466)
T PLN02655        364 INIYGCNMDKKRWENPEEWDPERFLGEKYE--SADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE-  440 (466)
T ss_pred             ecHHHhcCCcccCCChhccCccccCCCCcc--cCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc-
Confidence            999999999999999999999999965321  11236899999999999999999999999999999999999976643 


Q ss_pred             CccceeceeeeccCceEEEEEecC
Q 009299          515 PLELEYGIVLNFKHGVKLTVKNRK  538 (538)
Q Consensus       515 ~~~~~~~~~~~~~~~~~v~~~~r~  538 (538)
                      +.....++++.+++|+++++++|.
T Consensus       441 ~~~~~~~~~~~~~~~~~~~~~~r~  464 (466)
T PLN02655        441 EKEDTVQLTTQKLHPLHAHLKPRG  464 (466)
T ss_pred             cccchhheeEeecCCcEEEEeecC
Confidence            233456778889999999999884


No 22 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=2.1e-72  Score=569.90  Aligned_cols=449  Identities=33%  Similarity=0.559  Sum_probs=355.0

Q ss_pred             CCCCCCCCcccchhhhh--ccCChHHHHHHHHhCCeeEEEeCCccEEEEeCHHHHHHHhccccCCCCCCCCCCCCC--CC
Q 009299           52 VPGPPAIPLVGHIPLMA--KYGPDVFSILAKRYGPIFRFHMGRQPLIIVADAELCREVGIKKFKDIPNRSIPSPIA--AS  127 (538)
Q Consensus        52 ~PgP~~~p~~G~~~~~~--~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~--~~  127 (538)
                      ||||+++|++||+..+.  +++.+++.+++++||+||+++++++++++|+||+.+++++.++...+..+.......  ..
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            69999999999999887  556788999999999999999999999999999999999987655554432111111  01


Q ss_pred             ccccCcccccCCccHHHHHhhhcccCChh-hHhhhhHhHHHHHHHHHhhccC----CCccchhhhHHHHHHHHHHHhhcc
Q 009299          128 PLHQKGLFFTKNERWSTMRNTILSVYQPS-HLASLVPTMQSFIESATQNLDS----TEDITFSDLSLKMATDVIGQAAFG  202 (538)
Q Consensus       128 ~~~~~~l~~~~g~~w~~~R~~~~~~f~~~-~l~~~~~~~~~~~~~~~~~l~~----~~~vdl~~~~~~~~~~vi~~~~fG  202 (538)
                      ...+.+++..+|+.|+++|+.+.+.|+.. .+ .+.+.+.+.++.+++.|.+    .+.+|+.++++.+++|++++++||
T Consensus        81 ~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~fG  159 (463)
T PF00067_consen   81 PFGGKGLFFSDGERWRRQRRLLAPAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVLFG  159 (463)
T ss_dssp             HHTTTSSTTSSHHHHHHHHHHHHHHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHHHS
T ss_pred             cccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccceeeeeccccccccccccccccc
Confidence            35568899999999999999999999998 66 8999999999999988865    225899999999999999999999


Q ss_pred             cccCCCCCCCCCCCCcccCCCCCcchhhhhHhhhhhhhhhhhhhccchhHHHhhhhhhchhhHHHHHhhhcCCCchHHHH
Q 009299          203 VNFGLSKPQPISDSVTSVDTPANASEVSDFINQHIYSTTQLKMDLSGSLSIILGLLFPIIQEPFRQILKRIPGTMDWKFA  282 (538)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~p~~~~~~~~  282 (538)
                      .+++..+..             ...++.+.........        ......+...+|        ++.+++....+...
T Consensus       160 ~~~~~~~~~-------------~~~~~~~~~~~~~~~~--------~~~~~~~~~~~p--------~~~~~~~~~~~~~~  210 (463)
T PF00067_consen  160 KDFGSLDDE-------------DFEEFLEAFDELFELL--------SNFFWNLPFFFP--------WLKYLPTPLFRRFK  210 (463)
T ss_dssp             SHHHGTTHH-------------HHHHHHHHHHHHHHHH--------HSHHHHHHHHHH--------HHCTSSHHHHHHHH
T ss_pred             ceeeecccc-------------cccccccccccccccc--------cccccccccccc--------cccccccccccccc
Confidence            988744320             0011222222211100        000001112222        23344444455566


Q ss_pred             HHhHHHHHHHHHHHHHHHHhhCC---CcchHHHHHHHhc-hhccccCCCCCHHhHHHHHHHHHhhchhHHHHHHHHHHHH
Q 009299          283 RTNKNLSGRLEEIVSKRMEETNT---SSKDFLSLILKAR-ESETASKNIFTPDYISAVTYEHLLAGSATTAFTLSSVVYL  358 (538)
Q Consensus       283 ~~~~~~~~~~~~~i~~r~~~~~~---~~~d~l~~ll~~~-~~~~~~~~~lt~~~i~~~~~~~~~ag~dTts~tl~~~l~~  358 (538)
                      +..+.+.+++++++++++++.+.   ...|+++.+++.. +.++.  ..++++++.++++.+++||+|||+.+++|++++
T Consensus       211 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~--~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~  288 (463)
T PF00067_consen  211 RARDRLRKYIKEIIEERREELDDGDESRRDLLDSLLQASSDSDGP--SGLSDEEIAAELLTLLFAGHDTTASTLSWTLYE  288 (463)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSHHSSSSSCSSHHHHHHHHHHTTTTT--SSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccc
Confidence            67778888899999888776443   4789999999886 22221  359999999999999999999999999999999


Q ss_pred             HhcChHHHHHHHHHHHHcCCCCCCCChhhhhhcCchHHHHHHHHhcCcCCCc-ccceecCCceeeCCEEeCCCCEEEecc
Q 009299          359 VAGHPEVEKKVLAEIDAFGPHDQMPTAHDLQHKFPYLNQVIKEAMRVYLVSP-LVARETSKEVKIGGYHLPKGTWVWLAL  437 (538)
Q Consensus       359 L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~-~~~R~~~~d~~~~g~~Ip~G~~v~~~~  437 (538)
                      |+.||++|+|+++|++++.++++.++.+++. +||||+|||+||||++|+++ .++|.+.+|++++||.|||||.|+++.
T Consensus       289 L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~-~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~  367 (463)
T PF00067_consen  289 LAKNPEVQEKLREEIDSVLGDGREITFEDLS-KLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSI  367 (463)
T ss_dssp             HHHSHHHHHHHHHHHHHHTTTSSSHHHHHHG-TGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEH
T ss_pred             ccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999999999999999988666677888886 99999999999999999999 699999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCchhhhcCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHceeeeCCCCCCCcc
Q 009299          438 GVLAKDPKNFPEPCKFKPERFDPNCEEEKRRHPYAFIPFGIGPRACIGQKFSLQEIKLSLIQLYRKCVFRHSPNMEKPLE  517 (538)
Q Consensus       438 ~~~~~d~~~~~dp~~F~PeR~l~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~  517 (538)
                      +++|+||++|+||++|+||||++.+. ....++..|+|||.|+|.|||++||+.|+++++|.||++|||++.++......
T Consensus       368 ~~~~~d~~~~~dp~~F~P~R~~~~~~-~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~  446 (463)
T PF00067_consen  368 YALHRDPEYFPDPDEFDPERFLDERG-ISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQ  446 (463)
T ss_dssp             HHHTTSTTTSSSTTS--TTGGBTTTS-TBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEE
T ss_pred             cccccccccccccccccccccccccc-ccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCc
Confidence            99999999999999999999997654 12245678999999999999999999999999999999999999776544444


Q ss_pred             ceeceeeeccCceEEEE
Q 009299          518 LEYGIVLNFKHGVKLTV  534 (538)
Q Consensus       518 ~~~~~~~~~~~~~~v~~  534 (538)
                      .....++.|+.+++|.|
T Consensus       447 ~~~~~~~~~~~~~~~~~  463 (463)
T PF00067_consen  447 EQQNGFLLPPKPLKVKF  463 (463)
T ss_dssp             ECSCSSSEEESSSEEEE
T ss_pred             cccCceEeeCCCcEEeC
Confidence            33335667788888765


No 23 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=1.4e-70  Score=559.93  Aligned_cols=450  Identities=24%  Similarity=0.412  Sum_probs=338.5

Q ss_pred             ccccCCCCCCCCCcc----------------cchhhhhcc-CChHHHHHHHHhCCeeEEEeCCccEEEEeCHHHHHHHhc
Q 009299           47 WKVRRVPGPPAIPLV----------------GHIPLMAKY-GPDVFSILAKRYGPIFRFHMGRQPLIIVADAELCREVGI  109 (538)
Q Consensus        47 ~~~~~~PgP~~~p~~----------------G~~~~~~~~-~~~~~~~~~~~yG~v~~i~~~~~~~v~v~~p~~i~~i~~  109 (538)
                      ++...+|||+...+.                ||+..+... ....+.+||++|||||++++|++++++|+||+.+++++.
T Consensus       112 ~~~~~~pgp~laa~t~~ye~y~~~~~~~~~~G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~  191 (633)
T PLN02738        112 LAKLGPPGELLAFLFTWVEAGEGYPKIPEAKGSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILR  191 (633)
T ss_pred             hhhCCCCCchHHHHHcccccccccccCccccCcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHh
Confidence            445678999843222                333333222 235678999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCCCCCccccCcccccCCccHHHHHhhhcccCChhhHhhhhHhHHHHHHHHHhhccC----CCccchh
Q 009299          110 KKFKDIPNRSIPSPIAASPLHQKGLFFTKNERWSTMRNTILSVYQPSHLASLVPTMQSFIESATQNLDS----TEDITFS  185 (538)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~----~~~vdl~  185 (538)
                      ++...+.++.... .. ....+.++++.+|+.|+++|+.++++|+...+..+.+.+.+.++.++++|.+    ++++|+.
T Consensus       192 ~~~~~f~k~~~~~-~~-~~~~g~~l~~~dge~wr~rRr~l~p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~  269 (633)
T PLN02738        192 DNSKAYSKGILAE-IL-EFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEME  269 (633)
T ss_pred             hCcccCCCcchHH-HH-hhccCCceecCCcHHHHHHHHhccHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHH
Confidence            6655565543211 11 1234567888899999999999999999999999999999999999988853    5689999


Q ss_pred             hhHHHHHHHHHHHhhcccccCCCCCCCCCCCCcccCCCCCcchhhhhHhhhhhhhhhhhhhccchhHHHhhhhhhchhhH
Q 009299          186 DLSLKMATDVIGQAAFGVNFGLSKPQPISDSVTSVDTPANASEVSDFINQHIYSTTQLKMDLSGSLSIILGLLFPIIQEP  265 (538)
Q Consensus       186 ~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~  265 (538)
                      +.+..+++|+|+.++||.+++...++               +...+.+.........          ..+..+.+|.. +
T Consensus       270 ~~~~~lt~DVI~~~~FG~~~~~~~~~---------------~~~~~~~~~~~~~~~~----------~~~~~~~~~~~-p  323 (633)
T PLN02738        270 SLFSRLTLDIIGKAVFNYDFDSLSND---------------TGIVEAVYTVLREAED----------RSVSPIPVWEI-P  323 (633)
T ss_pred             HHHHHHHHHHHHHHHhCCCccccccc---------------hHHHHHHHHHHHHHHH----------Hhhcchhhhhh-h
Confidence            99999999999999999988754321               1111111111111000          00001111110 0


Q ss_pred             HHHHhhhcCCCchHHHHHHhHHHHHHHHHHHHHHHHh---h---------CCCcchHHHHHHHhchhccccCCCCCHHhH
Q 009299          266 FRQILKRIPGTMDWKFARTNKNLSGRLEEIVSKRMEE---T---------NTSSKDFLSLILKARESETASKNIFTPDYI  333 (538)
Q Consensus       266 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~---~---------~~~~~d~l~~ll~~~~~~~~~~~~lt~~~i  333 (538)
                      +   +..++.. .++..+..+.+.+..+++++.+++.   .         .....|+++.|++..       ..++++++
T Consensus       324 ~---~~~l~~~-~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ll~~~-------~~ls~~~L  392 (633)
T PLN02738        324 I---WKDISPR-QRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFLLASG-------DDVSSKQL  392 (633)
T ss_pred             H---HhhhchH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHHHHHHHcC-------CCCCHHHH
Confidence            0   1111111 1223333444444444444432210   0         113458999998642       13899999


Q ss_pred             HHHHHHHHhhchhHHHHHHHHHHHHHhcChHHHHHHHHHHHHcCCCCCCCChhhhhhcCchHHHHHHHHhcCcCCCcccc
Q 009299          334 SAVTYEHLLAGSATTAFTLSSVVYLVAGHPEVEKKVLAEIDAFGPHDQMPTAHDLQHKFPYLNQVIKEAMRVYLVSPLVA  413 (538)
Q Consensus       334 ~~~~~~~~~ag~dTts~tl~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~  413 (538)
                      .+++..+++||+|||+.+++|++++|++||++|+|||+|++++.+ ++.++.+++. +||||+|||+|+||++|++|.+.
T Consensus       393 ~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~-~~~~t~edL~-kLPYL~AVIkEtLRL~p~~p~~~  470 (633)
T PLN02738        393 RDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLG-DRFPTIEDMK-KLKYTTRVINESLRLYPQPPVLI  470 (633)
T ss_pred             HHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC-CCCCCHHHHc-cCHHHHHHHHHHHhcCCCccccc
Confidence            999999999999999999999999999999999999999999876 4668899997 99999999999999999999988


Q ss_pred             eecCCceeeCCEEeCCCCEEEecccccccCCCCCCCCCCCCCCCCCCCchh-hhcCCCCcccccCCCCCCCcchHHHHHH
Q 009299          414 RETSKEVKIGGYHLPKGTWVWLALGVLAKDPKNFPEPCKFKPERFDPNCEE-EKRRHPYAFIPFGIGPRACIGQKFSLQE  492 (538)
Q Consensus       414 R~~~~d~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~dp~~F~PeR~l~~~~~-~~~~~~~~~~pFg~G~r~C~G~~~A~~e  492 (538)
                      |.+.+|++++||.|||||.|+++.|.+||||++|+||++|+||||+.++.. ........|+|||.|+|.|+|++||++|
T Consensus       471 R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~E  550 (633)
T PLN02738        471 RRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFE  550 (633)
T ss_pred             eeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHHHHHH
Confidence            999999999999999999999999999999999999999999999853211 1223456899999999999999999999


Q ss_pred             HHHHHHHHHHHceeeeCCCCCCCccceeceeeeccCceEEEEEecC
Q 009299          493 IKLSLIQLYRKCVFRHSPNMEKPLELEYGIVLNFKHGVKLTVKNRK  538 (538)
Q Consensus       493 ~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  538 (538)
                      +++++|.|+++|+|++.++.. +.....+.++.|++|+++++++|.
T Consensus       551 l~l~LA~Llr~F~~el~~~~~-~~~~~~~~~~~p~~~l~v~l~~R~  595 (633)
T PLN02738        551 NVVATAMLVRRFDFQLAPGAP-PVKMTTGATIHTTEGLKMTVTRRT  595 (633)
T ss_pred             HHHHHHHHHHhCeeEeCCCCC-CcccccceEEeeCCCcEEEEEECC
Confidence            999999999999999977642 344445678889999999999984


No 24 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=8.9e-71  Score=550.25  Aligned_cols=429  Identities=19%  Similarity=0.283  Sum_probs=341.0

Q ss_pred             cccCCCCCCCCCcccchhhhhc-----cCChHHHHHHHHhCCeeEEEeCCccEEEEeCHHHHHHHhccccCCCCCCCCCC
Q 009299           48 KVRRVPGPPAIPLVGHIPLMAK-----YGPDVFSILAKRYGPIFRFHMGRQPLIIVADAELCREVGIKKFKDIPNRSIPS  122 (538)
Q Consensus        48 ~~~~~PgP~~~p~~G~~~~~~~-----~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~  122 (538)
                      +.+.||||+++|++||++.+..     ++..++.+++++||+||++++|++++|+++||+++++++.++...+..+..  
T Consensus         5 ~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~--   82 (452)
T PLN03141          5 KSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP--   82 (452)
T ss_pred             CCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc--
Confidence            4456779999999999988743     456788999999999999999999999999999999999877666654321  


Q ss_pred             CCCCCccccCcccccCCccHHHHHhhhcccCChhhHhhh-hHhHHHHHHHHHhhccCCCccchhhhHHHHHHHHHHHhhc
Q 009299          123 PIAASPLHQKGLFFTKNERWSTMRNTILSVYQPSHLASL-VPTMQSFIESATQNLDSTEDITFSDLSLKMATDVIGQAAF  201 (538)
Q Consensus       123 ~~~~~~~~~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~-~~~~~~~~~~~~~~l~~~~~vdl~~~~~~~~~~vi~~~~f  201 (538)
                      ......+++.+++..+|+.|+++|+++++.|+..++..+ .+.+.+.+++.++.|.+++.+++.+.+..++++++++++|
T Consensus        83 ~~~~~l~g~~~~~~~~g~~wr~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~  162 (452)
T PLN03141         83 KSLTELMGKSSILLINGSLQRRVHGLIGAFLKSPHLKAQITRDMERYVSESLDSWRDDPPVLVQDETKKIAFEVLVKALI  162 (452)
T ss_pred             hhHHHHhCcccccccCcHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhccCCCCEEhHHHHHHHHHHHHHHHHc
Confidence            111112333468888999999999999999988888764 6788888888888887667889999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCcccCCCCCcchhhhhHhhhhhhhhhhhhhccchhHHHhhhhhhchhhHHHHHhhhcCCCchHHH
Q 009299          202 GVNFGLSKPQPISDSVTSVDTPANASEVSDFINQHIYSTTQLKMDLSGSLSIILGLLFPIIQEPFRQILKRIPGTMDWKF  281 (538)
Q Consensus       202 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~p~~~~~~~  281 (538)
                      |.+.+..                    ..++.........        ..     ..+|.          .+|.....+.
T Consensus       163 G~~~~~~--------------------~~~~~~~~~~~~~--------~~-----~~~~~----------~~p~~~~~~~  199 (452)
T PLN03141        163 SLEPGEE--------------------MEFLKKEFQEFIK--------GL-----MSLPI----------KLPGTRLYRS  199 (452)
T ss_pred             CCCchHH--------------------HHHHHHHHHHHhh--------hH-----HhCcc----------CCCchHhHHH
Confidence            9754211                    1111111110000        00     01111          1222222334


Q ss_pred             HHHhHHHHHHHHHHHHHHHHhhCC-------CcchHHHHHHHhchhccccCCCCCHHhHHHHHHHHHhhchhHHHHHHHH
Q 009299          282 ARTNKNLSGRLEEIVSKRMEETNT-------SSKDFLSLILKARESETASKNIFTPDYISAVTYEHLLAGSATTAFTLSS  354 (538)
Q Consensus       282 ~~~~~~~~~~~~~~i~~r~~~~~~-------~~~d~l~~ll~~~~~~~~~~~~lt~~~i~~~~~~~~~ag~dTts~tl~~  354 (538)
                      .+..+.+.+++.++|+++++....       ...|+++.+++...      ..++++++..+++++++||+|||+.+++|
T Consensus       200 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~------~~l~~~~i~~~~~~ll~Ag~dTts~tl~~  273 (452)
T PLN03141        200 LQAKKRMVKLVKKIIEEKRRAMKNKEEDETGIPKDVVDVLLRDGS------DELTDDLISDNMIDMMIPGEDSVPVLMTL  273 (452)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhHHHHHHhcCC------CCCCHHHHHHHHHHHHHhcchhHHHHHHH
Confidence            456778888888988887654321       14689999997542      23899999999999999999999999999


Q ss_pred             HHHHHhcChHHHHHHHHHHHHcCC----CCCCCChhhhhhcCchHHHHHHHHhcCcCCCcccceecCCceeeCCEEeCCC
Q 009299          355 VVYLVAGHPEVEKKVLAEIDAFGP----HDQMPTAHDLQHKFPYLNQVIKEAMRVYLVSPLVARETSKEVKIGGYHLPKG  430 (538)
Q Consensus       355 ~l~~L~~~P~~~~kl~~Ei~~~~~----~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~G  430 (538)
                      ++++|++||++|+|+++|++++.+    .++.++.+++. +|||++|||+|+||++|+++.++|.+.+|++++||.||||
T Consensus       274 ~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~-~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~l~g~~IPkG  352 (452)
T PLN03141        274 AVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDYM-SLPFTQNVITETLRMGNIINGVMRKAMKDVEIKGYLIPKG  352 (452)
T ss_pred             HHHHHHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHh-ccHHHHHHHHHHHhccCCcCCcceeecCCeeECCEEECCC
Confidence            999999999999999999987632    24457888886 9999999999999999999889999999999999999999


Q ss_pred             CEEEecccccccCCCCCCCCCCCCCCCCCCCchhhhcCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHceeeeCC
Q 009299          431 TWVWLALGVLAKDPKNFPEPCKFKPERFDPNCEEEKRRHPYAFIPFGIGPRACIGQKFSLQEIKLSLIQLYRKCVFRHSP  510 (538)
Q Consensus       431 ~~v~~~~~~~~~d~~~~~dp~~F~PeR~l~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~  510 (538)
                      +.|+++.+++||||++|+||++|+||||+++..     .+.+|+|||+|+|.|+|++||++|+++++|.|+++|+|++.+
T Consensus       353 ~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~-----~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~  427 (452)
T PLN03141        353 WCVLAYFRSVHLDEENYDNPYQFNPWRWQEKDM-----NNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEE  427 (452)
T ss_pred             CEEEEehHhccCCchhcCCccccCcccccCCCC-----CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCC
Confidence            999999999999999999999999999996421     346899999999999999999999999999999999999866


Q ss_pred             CCCCCccceeceeeeccCceEEEEEecC
Q 009299          511 NMEKPLELEYGIVLNFKHGVKLTVKNRK  538 (538)
Q Consensus       511 ~~~~~~~~~~~~~~~~~~~~~v~~~~r~  538 (538)
                      +..  .   ...++.|+.|+.|++++|+
T Consensus       428 ~~~--~---~~~~~~~~~~~~~~~~~~~  450 (452)
T PLN03141        428 DTI--V---NFPTVRMKRKLPIWVTRID  450 (452)
T ss_pred             CCe--e---ecccccCCCCceEEEEeCC
Confidence            532  1   2357889999999999984


No 25 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=3.1e-69  Score=544.48  Aligned_cols=462  Identities=19%  Similarity=0.273  Sum_probs=334.4

Q ss_pred             CCCCCCCCCcccchhhhhc-cCC-hHHHHHHHHh-CCeeEEEeCCccEEEEeCHHHHHHHhccccCCCCCCCCCCCCCCC
Q 009299           51 RVPGPPAIPLVGHIPLMAK-YGP-DVFSILAKRY-GPIFRFHMGRQPLIIVADAELCREVGIKKFKDIPNRSIPSPIAAS  127 (538)
Q Consensus        51 ~~PgP~~~p~~G~~~~~~~-~~~-~~~~~~~~~y-G~v~~i~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~  127 (538)
                      .||||+++|++||++++.. .+. .++.++.++| |+||++++|++++|+|+||+.++++++++...++.++........
T Consensus        41 ~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~~l  120 (534)
T PLN03018         41 LPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIMETI  120 (534)
T ss_pred             CCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhhhh
Confidence            4789999999999988743 333 3566666666 799999999999999999999999998877778777543221111


Q ss_pred             ccccCccccc-CCccHHHHHhhhcccCChhhHhh-hhHhHHHHHHHHHhhcc----CCCccchhhhHHHHHHHHHHHhhc
Q 009299          128 PLHQKGLFFT-KNERWSTMRNTILSVYQPSHLAS-LVPTMQSFIESATQNLD----STEDITFSDLSLKMATDVIGQAAF  201 (538)
Q Consensus       128 ~~~~~~l~~~-~g~~w~~~R~~~~~~f~~~~l~~-~~~~~~~~~~~~~~~l~----~~~~vdl~~~~~~~~~~vi~~~~f  201 (538)
                      ...+.++++. +|+.|+++|+++++.|....+.+ +.+..+++++++++.+.    .+.++|+.+.+..+++|++++++|
T Consensus       121 ~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~~~f  200 (534)
T PLN03018        121 GDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMRMLF  200 (534)
T ss_pred             ccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHHHHHh
Confidence            1112346655 49999999999999876555444 44455556677776664    245789999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCcccCCCCCcchhhhhHhhhhhhhhhhhhhccchhHHHhhhhhhchhhHHHHHhhhcC-CCchHH
Q 009299          202 GVNFGLSKPQPISDSVTSVDTPANASEVSDFINQHIYSTTQLKMDLSGSLSIILGLLFPIIQEPFRQILKRIP-GTMDWK  280 (538)
Q Consensus       202 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~p-~~~~~~  280 (538)
                      |.+++.......           .+......................   .....+.+|       +++...+ .....+
T Consensus       201 G~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-------~~l~~~~~~~~~~~  259 (534)
T PLN03018        201 GRRHVTKENVFS-----------DDGRLGKAEKHHLEVIFNTLNCLP---GFSPVDYVE-------RWLRGWNIDGQEER  259 (534)
T ss_pred             CCcccccccccc-----------ccccchhHHHHHHHHHHHHHHHhC---CCcHHHHhh-------hhhhhhcccchHHH
Confidence            999864322000           000111111111110000000000   000011111       1111111 011223


Q ss_pred             HHHHhHHHHHHHHHHHHHHHHhh----C-CCcchHHHHHHHhchhccccCCCCCHHhHHHHHHHHHhhchhHHHHHHHHH
Q 009299          281 FARTNKNLSGRLEEIVSKRMEET----N-TSSKDFLSLILKARESETASKNIFTPDYISAVTYEHLLAGSATTAFTLSSV  355 (538)
Q Consensus       281 ~~~~~~~~~~~~~~~i~~r~~~~----~-~~~~d~l~~ll~~~~~~~~~~~~lt~~~i~~~~~~~~~ag~dTts~tl~~~  355 (538)
                      .......+.++++++++++++..    + ....|+++.|++..++++  +..++++++..++.++++||+|||+++++|+
T Consensus       260 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~--~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~  337 (534)
T PLN03018        260 AKVNVNLVRSYNNPIIDERVELWREKGGKAAVEDWLDTFITLKDQNG--KYLVTPDEIKAQCVEFCIAAIDNPANNMEWT  337 (534)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcccHHHHHHHhhcccC--CCCCCHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence            33445566777888887765421    1 124699999997654321  1138999999999999999999999999999


Q ss_pred             HHHHhcChHHHHHHHHHHHHcCCCCCCCChhhhhhcCchHHHHHHHHhcCcCCCccc-ceecCCceeeCCEEeCCCCEEE
Q 009299          356 VYLVAGHPEVEKKVLAEIDAFGPHDQMPTAHDLQHKFPYLNQVIKEAMRVYLVSPLV-ARETSKEVKIGGYHLPKGTWVW  434 (538)
Q Consensus       356 l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~~~g~~Ip~G~~v~  434 (538)
                      +++|+.||++|+|+++|++++.+.++.++.+++. +|||++|||+|+||++|++|.. .|.+.+|++++||.|||||.|+
T Consensus       338 l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~-~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~  416 (534)
T PLN03018        338 LGEMLKNPEILRKALKELDEVVGKDRLVQESDIP-NLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIH  416 (534)
T ss_pred             HHHHHcCHHHHHHHHHHHHHHhCCCCCCCHHHhc-CCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEE
Confidence            9999999999999999999987766778888886 9999999999999999999985 7999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCCCCCCCCCCCchhhh----cCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHceeeeCC
Q 009299          435 LALGVLAKDPKNFPEPCKFKPERFDPNCEEEK----RRHPYAFIPFGIGPRACIGQKFSLQEIKLSLIQLYRKCVFRHSP  510 (538)
Q Consensus       435 ~~~~~~~~d~~~~~dp~~F~PeR~l~~~~~~~----~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~  510 (538)
                      ++.+++||||++|+||++|+||||+++++...    ..+...|+|||+|+|.|+|++||.+|+++++|+|+++|+|++.+
T Consensus       417 ~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~  496 (534)
T PLN03018        417 VCRPGLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQ  496 (534)
T ss_pred             EChHHhcCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCC
Confidence            99999999999999999999999996432111    12456899999999999999999999999999999999999876


Q ss_pred             CC-CCCccceeceeeeccCceEEEEEec
Q 009299          511 NM-EKPLELEYGIVLNFKHGVKLTVKNR  537 (538)
Q Consensus       511 ~~-~~~~~~~~~~~~~~~~~~~v~~~~r  537 (538)
                      +. ..+.....+.+. .+.|++|++++|
T Consensus       497 ~~~~~~~~~~~~~~~-~p~~~~v~~~~R  523 (534)
T PLN03018        497 DFGPLSLEEDDASLL-MAKPLLLSVEPR  523 (534)
T ss_pred             CCCCCCcccccccee-cCCCeEEEEEec
Confidence            53 211222234444 567999999998


No 26 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=4.4e-69  Score=546.34  Aligned_cols=432  Identities=22%  Similarity=0.331  Sum_probs=338.8

Q ss_pred             ccCCCCCCCCCcccchhhhhc-----cCChHHHHHHHHhCC--eeEEEeCCccEEEEeCHHHHHHHhccccCCCCCCCCC
Q 009299           49 VRRVPGPPAIPLVGHIPLMAK-----YGPDVFSILAKRYGP--IFRFHMGRQPLIIVADAELCREVGIKKFKDIPNRSIP  121 (538)
Q Consensus        49 ~~~~PgP~~~p~~G~~~~~~~-----~~~~~~~~~~~~yG~--v~~i~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~  121 (538)
                      .+.+|||+++|++|++..+..     ++..++.+++++||+  +|++++++.++|+++||+++++++.++ +.|..+. +
T Consensus        41 ~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~~-~  118 (490)
T PLN02302         41 PPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPGW-P  118 (490)
T ss_pred             CCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-CccccCC-c
Confidence            456789999999999887632     456788999999997  799999999999999999999999754 4443321 1


Q ss_pred             CCCCCCccccCcccccCCccHHHHHhhhcccCC-hhhHhhhhHhHHHHHHHHHhhccCCCccchhhhHHHHHHHHHHHhh
Q 009299          122 SPIAASPLHQKGLFFTKNERWSTMRNTILSVYQ-PSHLASLVPTMQSFIESATQNLDSTEDITFSDLSLKMATDVIGQAA  200 (538)
Q Consensus       122 ~~~~~~~~~~~~l~~~~g~~w~~~R~~~~~~f~-~~~l~~~~~~~~~~~~~~~~~l~~~~~vdl~~~~~~~~~~vi~~~~  200 (538)
                      .... ...++.+++..+|+.|+++|+.+++.|+ .+.++.+.+.+.+.++++++.+...+.+|+.+++..++++++++++
T Consensus       119 ~~~~-~~~g~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~~~~v~~~~~~~~~~~~vi~~~~  197 (490)
T PLN02302        119 ESTV-ELIGRKSFVGITGEEHKRLRRLTAAPVNGPEALSTYIPYIEENVKSCLEKWSKMGEIEFLTELRKLTFKIIMYIF  197 (490)
T ss_pred             hhHH-HHhccccccccCcHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHhcCCCCEehHHHHHHHHHHHHHHHH
Confidence            1111 1223344566789999999999999995 6789999999999999999999776679999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCcccCCCCCcchhhhhHhhhhhhhhhhhhhccchhHHHhhhhhhchhhHHHHHhhhcCCCchHH
Q 009299          201 FGVNFGLSKPQPISDSVTSVDTPANASEVSDFINQHIYSTTQLKMDLSGSLSIILGLLFPIIQEPFRQILKRIPGTMDWK  280 (538)
Q Consensus       201 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~p~~~~~~  280 (538)
                      ||.+++..                    ..++.... ....           ..+. .++          ..+|.....+
T Consensus       198 ~G~~~~~~--------------------~~~~~~~~-~~~~-----------~~~~-~~~----------~~~p~~~~~~  234 (490)
T PLN02302        198 LSSESELV--------------------MEALEREY-TTLN-----------YGVR-AMA----------INLPGFAYHR  234 (490)
T ss_pred             cCCCChHH--------------------HHHHHHHH-HHHH-----------HHhh-hCC----------cCCCchhhHH
Confidence            99764321                    01111100 0000           0000 000          0112222233


Q ss_pred             HHHHhHHHHHHHHHHHHHHHHhhC----CCcchHHHHHHHhchhccccCCCCCHHhHHHHHHHHHhhchhHHHHHHHHHH
Q 009299          281 FARTNKNLSGRLEEIVSKRMEETN----TSSKDFLSLILKARESETASKNIFTPDYISAVTYEHLLAGSATTAFTLSSVV  356 (538)
Q Consensus       281 ~~~~~~~~~~~~~~~i~~r~~~~~----~~~~d~l~~ll~~~~~~~~~~~~lt~~~i~~~~~~~~~ag~dTts~tl~~~l  356 (538)
                      ..+..+.+.+++.+.++++++...    .+..|+++.+++..++++   ..++++++.+++..+++||+|||+++++|++
T Consensus       235 ~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~---~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l  311 (490)
T PLN02302        235 ALKARKKLVALFQSIVDERRNSRKQNISPRKKDMLDLLLDAEDENG---RKLDDEEIIDLLLMYLNAGHESSGHLTMWAT  311 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccCCCCcCCHHHHHHhhhccCC---CCCCHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            445556777788888887765422    245799999998654332   2489999999999999999999999999999


Q ss_pred             HHHhcChHHHHHHHHHHHHcCCCC----CCCChhhhhhcCchHHHHHHHHhcCcCCCcccceecCCceeeCCEEeCCCCE
Q 009299          357 YLVAGHPEVEKKVLAEIDAFGPHD----QMPTAHDLQHKFPYLNQVIKEAMRVYLVSPLVARETSKEVKIGGYHLPKGTW  432 (538)
Q Consensus       357 ~~L~~~P~~~~kl~~Ei~~~~~~~----~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~G~~  432 (538)
                      ++|++||++|+|+++|++++.+..    ..++.+++. +|||++|||+|+||++|++|...|.+.+|++++||.||||+.
T Consensus       312 ~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~-~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~Gt~  390 (490)
T PLN02302        312 IFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVR-KMEYLSQVIDETLRLINISLTVFREAKTDVEVNGYTIPKGWK  390 (490)
T ss_pred             HHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHh-cChHHHHHHHHHHHhCCCcccchhcccCCEeECCEEECCCCE
Confidence            999999999999999999875431    226788886 999999999999999999999899999999999999999999


Q ss_pred             EEecccccccCCCCCCCCCCCCCCCCCCCchhhhcCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHceeeeCCCC
Q 009299          433 VWLALGVLAKDPKNFPEPCKFKPERFDPNCEEEKRRHPYAFIPFGIGPRACIGQKFSLQEIKLSLIQLYRKCVFRHSPNM  512 (538)
Q Consensus       433 v~~~~~~~~~d~~~~~dp~~F~PeR~l~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~  512 (538)
                      |.++.+++||||++|+||++|+||||++..     ..+..|+|||+|+|.|+|+++|..|+++++|.++++|+|++.++.
T Consensus       391 v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~-----~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~  465 (490)
T PLN02302        391 VLAWFRQVHMDPEVYPNPKEFDPSRWDNYT-----PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPG  465 (490)
T ss_pred             EEeeHHHhcCCcccCCCccccChhhcCCCC-----CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCC
Confidence            999999999999999999999999999642     134579999999999999999999999999999999999986542


Q ss_pred             CCCccceeceeeeccCceEEEEEecC
Q 009299          513 EKPLELEYGIVLNFKHGVKLTVKNRK  538 (538)
Q Consensus       513 ~~~~~~~~~~~~~~~~~~~v~~~~r~  538 (538)
                      .   .........|++++.|++++|.
T Consensus       466 ~---~~~~~~~~~p~~~~~~~~~~~~  488 (490)
T PLN02302        466 C---KVMYLPHPRPKDNCLARITKVA  488 (490)
T ss_pred             C---cceeCCCCCCCCCceEEEEecc
Confidence            2   2223344789999999999874


No 27 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=1.3e-68  Score=533.06  Aligned_cols=452  Identities=19%  Similarity=0.281  Sum_probs=346.1

Q ss_pred             HHHHHHHHHHHHHHHHHhhccc--cccCCCCCCCCCcccchhhhh-----ccCChHHHHHHHHhCCeeEEEeCCccEEEE
Q 009299           26 SMIFTVLAILAGVLGYLYGPYW--KVRRVPGPPAIPLVGHIPLMA-----KYGPDVFSILAKRYGPIFRFHMGRQPLIIV   98 (538)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~PgP~~~p~~G~~~~~~-----~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v   98 (538)
                      ++.+.+++++..++.++.+...  +.+.+|||.++|++||++.+.     .++..++.+++++||++|+++++++++|+|
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv   83 (472)
T PLN02987          4 SAFLLLLSSLAAIFFLLLRRTRYRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFS   83 (472)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEE
Confidence            4556666666666666654432  234577999999999998763     345677889999999999999999999999


Q ss_pred             eCHHHHHHHhccccCCCCCCCCCCCCCCCccccCcccccCCccHHHHHhhhcccCChhhHhhhh-HhHHHHHHHHHhhcc
Q 009299           99 ADAELCREVGIKKFKDIPNRSIPSPIAASPLHQKGLFFTKNERWSTMRNTILSVYQPSHLASLV-PTMQSFIESATQNLD  177 (538)
Q Consensus        99 ~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~-~~~~~~~~~~~~~l~  177 (538)
                      +||+++++++.++...+..+.. . .....+++.|+++.+|+.|+++|+++.+.++.+.+..+. ..+.+.++..++.|.
T Consensus        84 ~~pe~~~~il~~~~~~f~~~~~-~-~~~~~lg~~~l~~~~g~~wr~~R~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (472)
T PLN02987         84 ADPETNRFILQNEGKLFECSYP-G-SISNLLGKHSLLLMKGNLHKKMHSLTMSFANSSIIKDHLLLDIDRLIRFNLDSWS  161 (472)
T ss_pred             eCHHHHHHHHhCCCceEEecCc-H-HHHHHhCcccccccCcHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhhc
Confidence            9999999999877666644321 1 111223446888889999999999987644545555543 234455555566664


Q ss_pred             CCCccchhhhHHHHHHHHHHHhhcccccCCCCCCCCCCCCcccCCCCCcchhhhhHhhhhhhhhhhhhhccchhHHHhhh
Q 009299          178 STEDITFSDLSLKMATDVIGQAAFGVNFGLSKPQPISDSVTSVDTPANASEVSDFINQHIYSTTQLKMDLSGSLSIILGL  257 (538)
Q Consensus       178 ~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (538)
                        +++++.+.+.+++++++++++||.+.+...                 +   .+.........           ..+..
T Consensus       162 --~~v~~~~~~~~~t~~vi~~~~fg~~~~~~~-----------------~---~~~~~~~~~~~-----------~~~~~  208 (472)
T PLN02987        162 --SRVLLMEEAKKITFELTVKQLMSFDPGEWT-----------------E---SLRKEYVLVIE-----------GFFSV  208 (472)
T ss_pred             --cceehHHHHHHHHHHHHHHHHcCCCChHHH-----------------H---HHHHHHHHHHh-----------hhhcC
Confidence              468999999999999999999997543110                 0   11111110000           00111


Q ss_pred             hhhchhhHHHHHhhhcCCCchHHHHHHhHHHHHHHHHHHHHHHHhhC---CCcchHHHHHHHhchhccccCCCCCHHhHH
Q 009299          258 LFPIIQEPFRQILKRIPGTMDWKFARTNKNLSGRLEEIVSKRMEETN---TSSKDFLSLILKARESETASKNIFTPDYIS  334 (538)
Q Consensus       258 ~~p~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~---~~~~d~l~~ll~~~~~~~~~~~~lt~~~i~  334 (538)
                      .+|++.            ...++..+..+.+.+++.++|+++++...   ...+|+++.|++..+       .++++++.
T Consensus       209 ~~p~l~------------~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~~-------~~~~~ei~  269 (472)
T PLN02987        209 PLPLFS------------TTYRRAIQARTKVAEALTLVVMKRRKEEEEGAEKKKDMLAALLASDD-------GFSDEEIV  269 (472)
T ss_pred             CCcCCC------------chHHHHHHHHHHHHHHHHHHHHHHHhhhhccCcccccHHHHHHhcCC-------CCCHHHHH
Confidence            233321            12344566777888888899988766422   235799999997531       38999999


Q ss_pred             HHHHHHHhhchhHHHHHHHHHHHHHhcChHHHHHHHHHHHHcCC---CCCCCChhhhhhcCchHHHHHHHHhcCcCCCcc
Q 009299          335 AVTYEHLLAGSATTAFTLSSVVYLVAGHPEVEKKVLAEIDAFGP---HDQMPTAHDLQHKFPYLNQVIKEAMRVYLVSPL  411 (538)
Q Consensus       335 ~~~~~~~~ag~dTts~tl~~~l~~L~~~P~~~~kl~~Ei~~~~~---~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~  411 (538)
                      ++++.+++||+|||+.+++|++++|+.||++|+|+++|++++..   +++.++.+++. +|||++||++|+||++|+++.
T Consensus       270 ~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~-~lpyl~a~i~EtLRl~p~~~~  348 (472)
T PLN02987        270 DFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYK-SMPFTQCVVNETLRVANIIGG  348 (472)
T ss_pred             HHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHh-cChHHHHHHHHHHHccCCcCC
Confidence            99999999999999999999999999999999999999998743   23456788886 899999999999999999988


Q ss_pred             cceecCCceeeCCEEeCCCCEEEecccccccCCCCCCCCCCCCCCCCCCCchhhhcCCCCcccccCCCCCCCcchHHHHH
Q 009299          412 VARETSKEVKIGGYHLPKGTWVWLALGVLAKDPKNFPEPCKFKPERFDPNCEEEKRRHPYAFIPFGIGPRACIGQKFSLQ  491 (538)
Q Consensus       412 ~~R~~~~d~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~dp~~F~PeR~l~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~  491 (538)
                      +.|.+.+|++++||.||||+.|+++.+.+|+||++|+||++|+||||+++...  ......|+|||+|+|.|||++||+.
T Consensus       349 ~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~--~~~~~~~l~FG~G~r~C~G~~lA~~  426 (472)
T PLN02987        349 IFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGT--TVPSNVFTPFGGGPRLCPGYELARV  426 (472)
T ss_pred             ccccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCC--CCCCcceECCCCCCcCCCcHHHHHH
Confidence            89999999999999999999999999999999999999999999999964321  1134579999999999999999999


Q ss_pred             HHHHHHHHHHHHceeeeCCCCCCCccceeceeeeccCceEEEEEecC
Q 009299          492 EIKLSLIQLYRKCVFRHSPNMEKPLELEYGIVLNFKHGVKLTVKNRK  538 (538)
Q Consensus       492 e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  538 (538)
                      |+++++|.|+++|+|++.++.  +..  ...+..|.+|+.+++++|+
T Consensus       427 e~~~~la~ll~~f~~~~~~~~--~~~--~~~~~~p~~~~~~~~~~r~  469 (472)
T PLN02987        427 ALSVFLHRLVTRFSWVPAEQD--KLV--FFPTTRTQKRYPINVKRRD  469 (472)
T ss_pred             HHHHHHHHHHhceEEEECCCC--cee--ecccccCCCCceEEEEecc
Confidence            999999999999999987653  222  3457889999999999985


No 28 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=1.2e-67  Score=530.39  Aligned_cols=441  Identities=20%  Similarity=0.267  Sum_probs=336.6

Q ss_pred             CCCcccchhhhhccCChHHHHHHHHhC-CeeEEEeCCccEEEEeCHHHHHHHhccccCCCCCCCCCCCCCCCccccCccc
Q 009299           57 AIPLVGHIPLMAKYGPDVFSILAKRYG-PIFRFHMGRQPLIIVADAELCREVGIKKFKDIPNRSIPSPIAASPLHQKGLF  135 (538)
Q Consensus        57 ~~p~~G~~~~~~~~~~~~~~~~~~~yG-~v~~i~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~  135 (538)
                      ..++.|++.....+..+.+..+.++++ .+++++..+.  ++++||+.+++++.++.+.|++........ ....|.|++
T Consensus        48 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~-~~~~g~gi~  124 (502)
T PLN02426         48 RAYLTASWAKDFDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAIL-GDLLGRGIF  124 (502)
T ss_pred             CCCccHHHHHhcccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHH-HHhcCCcee
Confidence            356788876654555667777888887 6888876554  899999999999987666666443221111 123467999


Q ss_pred             ccCCccHHHHHhhhcccCChhhHhhhh--HhHHHHHHHHHhhccC------CCccchhhhHHHHHHHHHHHhhcccccCC
Q 009299          136 FTKNERWSTMRNTILSVYQPSHLASLV--PTMQSFIESATQNLDS------TEDITFSDLSLKMATDVIGQAAFGVNFGL  207 (538)
Q Consensus       136 ~~~g~~w~~~R~~~~~~f~~~~l~~~~--~~~~~~~~~~~~~l~~------~~~vdl~~~~~~~~~~vi~~~~fG~~~~~  207 (538)
                      +.+|+.|+++||.+++.|+.++++.+.  +.+.+.++++++.+.+      +.++|+.+++..+++|+++.++||.+++.
T Consensus       125 ~~~g~~wk~~Rk~l~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~  204 (502)
T PLN02426        125 NVDGDSWRFQRKMASLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDPGC  204 (502)
T ss_pred             ecCcHHHHHHHHHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCCcc
Confidence            999999999999999999999998864  5666767767665532      35689999999999999999999998876


Q ss_pred             CCCCCCCCCCcccCCCCCcchhhhhHhhhhhhhhhhhhhccchhHHHhhhhhhchhhHHHHHhhhcCCCchHHHHHHhHH
Q 009299          208 SKPQPISDSVTSVDTPANASEVSDFINQHIYSTTQLKMDLSGSLSIILGLLFPIIQEPFRQILKRIPGTMDWKFARTNKN  287 (538)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~p~~~~~~~~~~~~~  287 (538)
                      .+.+.            ..+++.+.+.......           .......+|++.    .+...++....++..+..+.
T Consensus       205 l~~~~------------~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~  257 (502)
T PLN02426        205 LELSL------------PISEFADAFDTASKLS-----------AERAMAASPLLW----KIKRLLNIGSERKLKEAIKL  257 (502)
T ss_pred             cCCCC------------CccHHHHHHHHHHHHH-----------HHHHhcchhHHH----HHHHhcccchhHHHHHHHHH
Confidence            53210            0111222111111000           000011122221    11222332234456677788


Q ss_pred             HHHHHHHHHHHHHHhhCCCcchHHHHHHHhchhccccCCCCCHHhHHHHHHHHHhhchhHHHHHHHHHHHHHhcChHHHH
Q 009299          288 LSGRLEEIVSKRMEETNTSSKDFLSLILKARESETASKNIFTPDYISAVTYEHLLAGSATTAFTLSSVVYLVAGHPEVEK  367 (538)
Q Consensus       288 ~~~~~~~~i~~r~~~~~~~~~d~l~~ll~~~~~~~~~~~~lt~~~i~~~~~~~~~ag~dTts~tl~~~l~~L~~~P~~~~  367 (538)
                      +.+++.++|+++++.......|+++.+++..         .+++++.+++.++++||+|||+++++|++++|++||++|+
T Consensus       258 ~~~~~~~~I~~r~~~~~~~~~dll~~ll~~~---------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~  328 (502)
T PLN02426        258 VDELAAEVIRQRRKLGFSASKDLLSRFMASI---------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVAS  328 (502)
T ss_pred             HHHHHHHHHHHHHhcccCCcchHHHHHHhcC---------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHH
Confidence            8899999999887653345679999999642         3678999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCC-CCCCChhhhhhcCchHHHHHHHHhcCcCCCcccceecCCceee-CCEEeCCCCEEEecccccccCCC
Q 009299          368 KVLAEIDAFGPH-DQMPTAHDLQHKFPYLNQVIKEAMRVYLVSPLVARETSKEVKI-GGYHLPKGTWVWLALGVLAKDPK  445 (538)
Q Consensus       368 kl~~Ei~~~~~~-~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~-~g~~Ip~G~~v~~~~~~~~~d~~  445 (538)
                      |+++|++++.+. ...++.+++. +|||++|||+|+||++||+|...|.+.+|.++ +|+.|||||.|.++.+++||||+
T Consensus       329 kl~~Ei~~~~~~~~~~~t~~~l~-~LpYl~avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~  407 (502)
T PLN02426        329 AIREEADRVMGPNQEAASFEEMK-EMHYLHAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMER  407 (502)
T ss_pred             HHHHHHHHhhCCCCCCCCHHHHh-cChHHHHHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCCcc
Confidence            999999987654 3467889986 99999999999999999999988999999887 99999999999999999999999


Q ss_pred             CC-CCCCCCCCCCCCCCchhhhcCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHceeeeCCCCCCCccceeceee
Q 009299          446 NF-PEPCKFKPERFDPNCEEEKRRHPYAFIPFGIGPRACIGQKFSLQEIKLSLIQLYRKCVFRHSPNMEKPLELEYGIVL  524 (538)
Q Consensus       446 ~~-~dp~~F~PeR~l~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~  524 (538)
                      +| +||++|+||||++++. .....+..|+|||+|+|.|+|++||++|+++++|.++++|+|++.++.........+.++
T Consensus       408 ~~G~dp~~F~PeRwl~~~~-~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~  486 (502)
T PLN02426        408 IWGPDCLEFKPERWLKNGV-FVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTA  486 (502)
T ss_pred             ccCcChhhcCccccCCCCC-cCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEE
Confidence            99 9999999999997421 112245679999999999999999999999999999999999986543222344567889


Q ss_pred             eccCceEEEEEecC
Q 009299          525 NFKHGVKLTVKNRK  538 (538)
Q Consensus       525 ~~~~~~~v~~~~r~  538 (538)
                      +|++|++|++++|.
T Consensus       487 ~~~~gl~v~~~~r~  500 (502)
T PLN02426        487 TVRGGLPVRVRERV  500 (502)
T ss_pred             ecCCCEEEEEEEcc
Confidence            99999999999884


No 29 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=6e-68  Score=483.78  Aligned_cols=443  Identities=22%  Similarity=0.290  Sum_probs=351.7

Q ss_pred             cCCCCCC-CCCcccchhhhhccCChHHHHHHHHhCCeeEEEeCCccEEEEeCHHHHHHHhccccCCCCCCCCCCCCCCCc
Q 009299           50 RRVPGPP-AIPLVGHIPLMAKYGPDVFSILAKRYGPIFRFHMGRQPLIIVADAELCREVGIKKFKDIPNRSIPSPIAASP  128 (538)
Q Consensus        50 ~~~PgP~-~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~  128 (538)
                      ..||--+ |+||+|+...+++++.++++++.+|||+||++.++|+.+.++.||+....++.....+++....+.... .+
T Consensus        31 ~~PPli~gwiP~lG~a~~fgk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~-~~  109 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAFGKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLT-TP  109 (486)
T ss_pred             CCCcccccCcchhhHHHHhccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhh-hh
Confidence            3666544 699999999999999999999999999999999999999999999999999876655555444333333 34


Q ss_pred             cccCccccc-CCccHHHHHhhhcccCChhhHhhhhHhHHHHHHHHHhh-ccCCCccc-hhhhHHHHHHHHHHHhhccccc
Q 009299          129 LHQKGLFFT-KNERWSTMRNTILSVYQPSHLASLVPTMQSFIESATQN-LDSTEDIT-FSDLSLKMATDVIGQAAFGVNF  205 (538)
Q Consensus       129 ~~~~~l~~~-~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~-l~~~~~vd-l~~~~~~~~~~vi~~~~fG~~~  205 (538)
                      ..|+|+... ++....++.+.+..++...+++++.+.|.+++.+.++. |.++..+| +.+....+.+.+.-..++|..-
T Consensus       110 vFg~~v~~d~~~~~~~e~~~~~k~~L~~~~lk~~~e~m~~el~~~f~~~~~~s~~~d~l~~~~~~ii~tAs~~ll~~e~r  189 (486)
T KOG0684|consen  110 VFGKGVVYDVPNHVMMEQKKFFKSALGGVALKSLVELMLEELHAYFETSLGESGETDGLYTFCRLIIFTASRLLLGGEVR  189 (486)
T ss_pred             hcCCCccccCCCchHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhcccccccchhHhhhhhHHHhhhhHHHhhhhhhh
Confidence            455666544 68888999999999999999999999999999999987 66644455 4555555555544444455443


Q ss_pred             CCCCCCCCCCCCcccCCCCCcchhhhhHhhhhhhhhhhhhhccchhHHHhhhhhhchhhHHHHHhhhcCCCchHHHHHHh
Q 009299          206 GLSKPQPISDSVTSVDTPANASEVSDFINQHIYSTTQLKMDLSGSLSIILGLLFPIIQEPFRQILKRIPGTMDWKFARTN  285 (538)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~p~~~~~~~~~~~  285 (538)
                      ...++                 .......+......            .+...||.          ++|-...++..++.
T Consensus       190 ~~~d~-----------------~~a~l~~dLd~~F~------------~~d~~FP~----------~LP~~~~r~~~ra~  230 (486)
T KOG0684|consen  190 DQLDA-----------------DVAKLYHDLDQGFQ------------PFDFLFPY----------NLPIPLLRRRDRAR  230 (486)
T ss_pred             hhhcc-----------------hHHHHHHHHhcccc------------chHhhccc----------CCCcchhhhHHHHH
Confidence            33222                 11122222211111            11223331          45555566677888


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCcchHHHHHHHhchhccccCCCCCHHhHHHHHHHHHhhchhHHHHHHHHHHHHHhcChHH
Q 009299          286 KNLSGRLEEIVSKRMEETNTSSKDFLSLILKARESETASKNIFTPDYISAVTYEHLLAGSATTAFTLSSVVYLVAGHPEV  365 (538)
Q Consensus       286 ~~~~~~~~~~i~~r~~~~~~~~~d~l~~ll~~~~~~~~~~~~lt~~~i~~~~~~~~~ag~dTts~tl~~~l~~L~~~P~~  365 (538)
                      +.+.+.+.++|.+|++..+....|+++.+++ ..+++   ...+++|+.+..+.++|||+.||+.|.+|++++|++|||+
T Consensus       231 ~~i~k~f~~~i~~rr~s~s~~~~dmlq~l~~-~y~dg---~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~  306 (486)
T KOG0684|consen  231 KKISKIFSKIILDRRASISKWDNDMLQSLME-KYKDG---RPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEA  306 (486)
T ss_pred             HHHHHHHHHHHHHHHhccccccHHHHHHHHH-HhhcC---CcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHH
Confidence            8999999999999988877778899999998 34433   3489999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCCCC-CChhhhhhcCchHHHHHHHHhcCcCCCcccceecCCceeeCC----EEeCCCCEEEeccccc
Q 009299          366 EKKVLAEIDAFGPHDQM-PTAHDLQHKFPYLNQVIKEAMRVYLVSPLVARETSKEVKIGG----YHLPKGTWVWLALGVL  440 (538)
Q Consensus       366 ~~kl~~Ei~~~~~~~~~-~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g----~~Ip~G~~v~~~~~~~  440 (538)
                      ++.+++|+.++++++.. .+.+.+. +||.|++||+|||||+||.+.+.|.+.+|.++.+    |.||+|.+|.++++.+
T Consensus       307 ~~a~~eE~k~vlG~~~~~l~~d~L~-~lplL~~~IkEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~  385 (486)
T KOG0684|consen  307 QKAVREEQKRVLGEKKEKLTYDQLK-DLPLLDSCIKETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLL  385 (486)
T ss_pred             HHHHHHHHHHHhhccCCCCCHHHHh-cchHHHHHHHHHHhcCCchhhHHHhhccceeeccCCcceecCCCCEEEeccccc
Confidence            99999999998776555 6777775 9999999999999999999999999999999955    9999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCchhh-hcCC--CCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHceeeeCCCCCCCcc
Q 009299          441 AKDPKNFPEPCKFKPERFDPNCEEE-KRRH--PYAFIPFGIGPRACIGQKFSLQEIKLSLIQLYRKCVFRHSPNMEKPLE  517 (538)
Q Consensus       441 ~~d~~~~~dp~~F~PeR~l~~~~~~-~~~~--~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~  517 (538)
                      |+||++|+||+.|+|+||++++++. +.+.  ...++|||+|.|.|||+.||.+|+|+++..+|++||+|+.++...+..
T Consensus       386 hr~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~P~~d  465 (486)
T KOG0684|consen  386 HRDPEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPFPEVD  465 (486)
T ss_pred             cCCccccCChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCCCCCC
Confidence            9999999999999999999766544 2222  235699999999999999999999999999999999999987444445


Q ss_pred             ceeceeeeccCceEEEEEecC
Q 009299          518 LEYGIVLNFKHGVKLTVKNRK  538 (538)
Q Consensus       518 ~~~~~~~~~~~~~~v~~~~r~  538 (538)
                      ++.. +..|.++++|+.|.|.
T Consensus       466 ~s~~-v~~P~g~v~irYK~R~  485 (486)
T KOG0684|consen  466 YSRM-VMQPEGDVRIRYKRRP  485 (486)
T ss_pred             HHHh-hcCCCCCceEEEeecC
Confidence            4433 7889999999999884


No 30 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=6.4e-67  Score=526.22  Aligned_cols=442  Identities=22%  Similarity=0.380  Sum_probs=337.2

Q ss_pred             CCCCCCCcccchhhhh-----ccCChHHHHHHHHhCCeeEEEeCCccEEEEeCHHHHHHHhccccCCCCCCCCCCCCCCC
Q 009299           53 PGPPAIPLVGHIPLMA-----KYGPDVFSILAKRYGPIFRFHMGRQPLIIVADAELCREVGIKKFKDIPNRSIPSPIAAS  127 (538)
Q Consensus        53 PgP~~~p~~G~~~~~~-----~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~  127 (538)
                      -|-.|||++|..+...     ...+..+.+|+++||+||++++|+.++++++||+++++++.+....+..+.... .. .
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~-~~-~   92 (489)
T PLN02936         15 GDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAE-VS-E   92 (489)
T ss_pred             CCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhh-hh-H
Confidence            4677899999866542     334577899999999999999999999999999999999976556666543211 11 1


Q ss_pred             ccccCcccccCCccHHHHHhhhcccCChhhHhhhhH-hHHHHHHHHHhhccC----CCccchhhhHHHHHHHHHHHhhcc
Q 009299          128 PLHQKGLFFTKNERWSTMRNTILSVYQPSHLASLVP-TMQSFIESATQNLDS----TEDITFSDLSLKMATDVIGQAAFG  202 (538)
Q Consensus       128 ~~~~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~-~~~~~~~~~~~~l~~----~~~vdl~~~~~~~~~~vi~~~~fG  202 (538)
                      ...+.++++++|+.|+++|++++++|+..++..+.+ .+.+.++.+++.+.+    ++++|+.+++..+++|+++.++||
T Consensus        93 ~~~~~~i~~~~g~~wk~~Rk~l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~~~fG  172 (489)
T PLN02936         93 FLFGSGFAIAEGELWTARRRAVVPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGLSVFN  172 (489)
T ss_pred             HHhcCccccCCchHHHHHHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHcC
Confidence            234578888899999999999999999888888754 678888888877743    568999999999999999999999


Q ss_pred             cccCCCCCCCCCCCCcccCCCCCcchhhhhHhhhhhhhhhhhhhccchhHHHhhhhhhchhhHHHHHhhh-cCCCchHHH
Q 009299          203 VNFGLSKPQPISDSVTSVDTPANASEVSDFINQHIYSTTQLKMDLSGSLSIILGLLFPIIQEPFRQILKR-IPGTMDWKF  281 (538)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~-~p~~~~~~~  281 (538)
                      .+++.....               ++..+.+........           ......+|++..+   ++.+ .|  ..++.
T Consensus       173 ~~~~~~~~~---------------~~~~~~~~~~~~~~~-----------~~~~~~~p~~~~~---~l~~~~p--~~~~~  221 (489)
T PLN02936        173 YNFDSLTTD---------------SPVIQAVYTALKEAE-----------TRSTDLLPYWKVD---FLCKISP--RQIKA  221 (489)
T ss_pred             CCccccccC---------------cHHHHHHHHHHHHHH-----------HhhhccchHHhhH---HHhccCh--hhHHH
Confidence            988754320               111122211111100           0011123322111   1111 11  12345


Q ss_pred             HHHhHHHHHHHHHHHHHHHHhhC-------------CCcchHHHHHHHhchhccccCCCCCHHhHHHHHHHHHhhchhHH
Q 009299          282 ARTNKNLSGRLEEIVSKRMEETN-------------TSSKDFLSLILKARESETASKNIFTPDYISAVTYEHLLAGSATT  348 (538)
Q Consensus       282 ~~~~~~~~~~~~~~i~~r~~~~~-------------~~~~d~l~~ll~~~~~~~~~~~~lt~~~i~~~~~~~~~ag~dTt  348 (538)
                      .+..+.+.+++.+.++++++..+             ....|+++.|++..+       .++++++.+++..+++||+|||
T Consensus       222 ~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~-------~~~~~~i~~~~~~~~~aG~dTt  294 (489)
T PLN02936        222 EKAVTVIRETVEDLVDKCKEIVEAEGEVIEGEEYVNDSDPSVLRFLLASRE-------EVSSVQLRDDLLSMLVAGHETT  294 (489)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccCchHHHHHHHhccc-------cCCHHHHHHHHHHHHHHhHHHH
Confidence            55666677777777776553210             124678999886432       2899999999999999999999


Q ss_pred             HHHHHHHHHHHhcChHHHHHHHHHHHHcCCCCCCCChhhhhhcCchHHHHHHHHhcCcCCCcc-cceecCCceeeCCEEe
Q 009299          349 AFTLSSVVYLVAGHPEVEKKVLAEIDAFGPHDQMPTAHDLQHKFPYLNQVIKEAMRVYLVSPL-VARETSKEVKIGGYHL  427 (538)
Q Consensus       349 s~tl~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~I  427 (538)
                      +++++|++++|++||++|+|+++|++++.++ +.++.+++. +|||++|||+||||++|++|. ..|.+.+|+.++||.|
T Consensus       295 a~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~-~~~~~~~~~-~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~I  372 (489)
T PLN02936        295 GSVLTWTLYLLSKNPEALRKAQEELDRVLQG-RPPTYEDIK-ELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKV  372 (489)
T ss_pred             HHHHHHHHHHHhcCHHHHHHHHHHHHHHhcC-CCCCHHHHh-hCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEE
Confidence            9999999999999999999999999998664 447788886 999999999999999999988 5555577788899999


Q ss_pred             CCCCEEEecccccccCCCCCCCCCCCCCCCCCCCchhh-hcCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHcee
Q 009299          428 PKGTWVWLALGVLAKDPKNFPEPCKFKPERFDPNCEEE-KRRHPYAFIPFGIGPRACIGQKFSLQEIKLSLIQLYRKCVF  506 (538)
Q Consensus       428 p~G~~v~~~~~~~~~d~~~~~dp~~F~PeR~l~~~~~~-~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~  506 (538)
                      |||+.|+++.+++||||++|+||++|+||||+.++... .......|+|||.|+|.|||++||++|+++++++|+++|+|
T Consensus       373 p~Gt~v~~~~~~~~rd~~~~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~  452 (489)
T PLN02936        373 NAGQDIMISVYNIHRSPEVWERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDL  452 (489)
T ss_pred             CCCCEEEecHHhccCChhhCCCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeE
Confidence            99999999999999999999999999999999643211 12234589999999999999999999999999999999999


Q ss_pred             eeCCCCCCCccceeceeeeccCceEEEEEecC
Q 009299          507 RHSPNMEKPLELEYGIVLNFKHGVKLTVKNRK  538 (538)
Q Consensus       507 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  538 (538)
                      ++.++.+  .....+.+..|+.+++|++++|.
T Consensus       453 ~~~~~~~--~~~~~~~~~~~~~~~~v~~~~R~  482 (489)
T PLN02936        453 ELVPDQD--IVMTTGATIHTTNGLYMTVSRRR  482 (489)
T ss_pred             EecCCCc--cceecceEEeeCCCeEEEEEeee
Confidence            9876533  23334577789999999999984


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=9.6e-59  Score=458.27  Aligned_cols=403  Identities=16%  Similarity=0.240  Sum_probs=292.1

Q ss_pred             cccCCCCCCCCCcccchhhhh-----ccCChHHHHHHHHhCC-eeEEEeCCccE-------EEEeCHHHHHHHhcc----
Q 009299           48 KVRRVPGPPAIPLVGHIPLMA-----KYGPDVFSILAKRYGP-IFRFHMGRQPL-------IIVADAELCREVGIK----  110 (538)
Q Consensus        48 ~~~~~PgP~~~p~~G~~~~~~-----~~~~~~~~~~~~~yG~-v~~i~~~~~~~-------v~v~~p~~i~~i~~~----  110 (538)
                      +++.|||+.++|++|+...+.     .++..++.+.++|||+ ||++.++|+|+       |+++||++++.++..    
T Consensus        15 ~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~   94 (480)
T PLN02648         15 PLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVD   94 (480)
T ss_pred             CCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhcc
Confidence            456789999999999987643     3346899999999999 99999998666       999999999999964    


Q ss_pred             ccCCCCCCCCCCCCCCCccccC---cccccCCccHHHHHhhhcccCChhhHhhhhHhHHHHHHHHHhhcc----CCCccc
Q 009299          111 KFKDIPNRSIPSPIAASPLHQK---GLFFTKNERWSTMRNTILSVYQPSHLASLVPTMQSFIESATQNLD----STEDIT  183 (538)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~---~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~----~~~~vd  183 (538)
                      +.+.+.. .++...  ..+++.   +++..+|+.|+++|+++.++|+ ..++.|.+.|.+.++++++.|.    ++.++|
T Consensus        95 ~~~~~~~-~~~~~~--~l~G~~~~~s~~~~~g~~H~r~Rrll~~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~~~~vd  170 (480)
T PLN02648         95 KRDVFTG-TYMPST--AFTGGYRVLSYLDPSEPKHAKLKSFLFELLK-SRHRRFIPEFRAAFAELFDTWEAELAKKGKAE  170 (480)
T ss_pred             cccccee-eeccCc--cccCCceeeeecCCCCchHHHHHHHHHHHHH-HhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcc
Confidence            3332332 222222  234445   7778899999999999999999 5778899999999999999994    245799


Q ss_pred             hhhhHHHHHHHHHHHhhcccccCCCCCCCCCCCCcccCCCCCcchhhhhHhhhhhhhhhhhhhccchhHHHhhhhhhchh
Q 009299          184 FSDLSLKMATDVIGQAAFGVNFGLSKPQPISDSVTSVDTPANASEVSDFINQHIYSTTQLKMDLSGSLSIILGLLFPIIQ  263 (538)
Q Consensus       184 l~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~  263 (538)
                      +.+.+..+++|++++++||.+.+...-               .+.+..+......                 ...+|...
T Consensus       171 v~~~~~~lt~~vi~~~lfG~~~~~~~l---------------~~~~~~~~~~~~~-----------------~~~~p~~~  218 (480)
T PLN02648        171 FNDPLDQMAFNFLCKALTGKDPSETAL---------------GSDGPALIQKWLA-----------------LQLAPLAS  218 (480)
T ss_pred             ccchHHHHHHHHHHHHHcCCCcchhhh---------------ccchhHHHHHHHH-----------------HHhhHHHH
Confidence            999999999999999999986543100               0001111111000                 00011110


Q ss_pred             hHHHHHhh-----hcCCCchHHHHHHhHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHhchhccccCCCCCHHhHHHHHH
Q 009299          264 EPFRQILK-----RIPGTMDWKFARTNKNLSGRLEEIVSKRMEETNTSSKDFLSLILKARESETASKNIFTPDYISAVTY  338 (538)
Q Consensus       264 ~~~~~~~~-----~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~d~l~~ll~~~~~~~~~~~~lt~~~i~~~~~  338 (538)
                      ..+..++.     +.+... ....+..+.+.+++++               .++.+++..++     .+++++++.++++
T Consensus       219 ~~l~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~---------------~~~~ll~~~~~-----~~l~~~ei~~~~l  277 (480)
T PLN02648        219 TGLPHVLEELLLHTFPLPF-FLVKSDYDKLYDFFRA---------------SATEALDLAEK-----FGISREEALHNLL  277 (480)
T ss_pred             cCchHHHHHHhhcccCCch-hhhhccHHHHHHHHHH---------------HHHHHHHHHHh-----cCCCHHHHHHHHH
Confidence            00000000     000000 0000011111111111               12233433222     2389999999987


Q ss_pred             H-HHhhchhHHHHHHHHHHHHHhcChH-HHHHHHHHHHHcCCC-CCCCChhhhhhcCchHHHHHHHHhcCcCCCccccee
Q 009299          339 E-HLLAGSATTAFTLSSVVYLVAGHPE-VEKKVLAEIDAFGPH-DQMPTAHDLQHKFPYLNQVIKEAMRVYLVSPLVARE  415 (538)
Q Consensus       339 ~-~~~ag~dTts~tl~~~l~~L~~~P~-~~~kl~~Ei~~~~~~-~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~R~  415 (538)
                      . +.+++++|++++++|++++|+.||+ +|+|+++|++++.+. ++.++.+++. +|||+++||+|+||++|+++.+.|.
T Consensus       278 ~~~~~~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~-~l~yl~avi~EtLRl~p~v~~~~r~  356 (480)
T PLN02648        278 FVLGFNAFGGFKIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALE-KMPLVKSVVYEALRIEPPVPFQYGR  356 (480)
T ss_pred             HHHHHHhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHh-cCHHHHHHHHHHHhhcCCcccccce
Confidence            5 3466777788899999999999995 999999999998653 4567889986 8999999999999999999999999


Q ss_pred             cCCceeeC----CEEeCCCCEEEecccccccCCCCCCCCCCCCCCCCCCCchhhhcCCCCccccc---------CCCCCC
Q 009299          416 TSKEVKIG----GYHLPKGTWVWLALGVLAKDPKNFPEPCKFKPERFDPNCEEEKRRHPYAFIPF---------GIGPRA  482 (538)
Q Consensus       416 ~~~d~~~~----g~~Ip~G~~v~~~~~~~~~d~~~~~dp~~F~PeR~l~~~~~~~~~~~~~~~pF---------g~G~r~  482 (538)
                      +.+|++++    ||.||||+.|+++.+.+||||++|+||++|+|+||+++....    ...+++|         |+|+|.
T Consensus       357 a~~d~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~~----~~~~~~f~~g~~~~~~G~G~R~  432 (480)
T PLN02648        357 AREDFVIESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGEK----LLKYVFWSNGRETESPTVGNKQ  432 (480)
T ss_pred             ecCCEEEecCCceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCccc----cccccccCCCcccCCCCCCCcc
Confidence            99999996    799999999999999999999999999999999998643211    1234444         677899


Q ss_pred             CcchHHHHHHHHHHHHHHHHHce-eeeCCCC
Q 009299          483 CIGQKFSLQEIKLSLIQLYRKCV-FRHSPNM  512 (538)
Q Consensus       483 C~G~~~A~~e~~~~la~ll~~f~-~~~~~~~  512 (538)
                      |+|++||+.|++++++.|+++|+ |++.++.
T Consensus       433 C~G~~~A~~e~~~~la~Ll~~f~~~~l~~~~  463 (480)
T PLN02648        433 CAGKDFVVLVARLFVAELFLRYDSFEIEVDT  463 (480)
T ss_pred             CccHHHHHHHHHHHHHHHHHHhCEEeecCCc
Confidence            99999999999999999999998 9987663


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=1.5e-54  Score=423.90  Aligned_cols=380  Identities=26%  Similarity=0.400  Sum_probs=302.9

Q ss_pred             hHHHHHHHHhCCeeEEEeCCcc--EEEEeCHHHHHHHhcccc--CCCCCCCCCCCCCCCccccCc-ccccCCccHHHHHh
Q 009299           73 DVFSILAKRYGPIFRFHMGRQP--LIIVADAELCREVGIKKF--KDIPNRSIPSPIAASPLHQKG-LFFTKNERWSTMRN  147 (538)
Q Consensus        73 ~~~~~~~~~yG~v~~i~~~~~~--~v~v~~p~~i~~i~~~~~--~~~~~~~~~~~~~~~~~~~~~-l~~~~g~~w~~~R~  147 (538)
                      .....+.+.||.+++++..+.-  ++++++++++++++.++.  ............ .....+.+ +++.+|+.|.++||
T Consensus        26 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~dg~~H~r~Rk  104 (411)
T COG2124          26 FFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPRFFSSALGAGLRPRL-LRPVLGDGSLLTLDGPEHTRLRK  104 (411)
T ss_pred             hhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcccccccccccccccc-hhhhccccceeecCCHHHHHHHH
Confidence            4455677888988888866543  899999999999997653  111111111111 12334444 78889999999999


Q ss_pred             hhcccCChhhHhhhhHhHHHHHHHHHhhccCCCccchhhhHHHHHHHHHHHhhcccccCCCCCCCCCCCCcccCCCCCcc
Q 009299          148 TILSVYQPSHLASLVPTMQSFIESATQNLDSTEDITFSDLSLKMATDVIGQAAFGVNFGLSKPQPISDSVTSVDTPANAS  227 (538)
Q Consensus       148 ~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~  227 (538)
                      +++++|+++.++++.+.+.+.++++++.+..++..++.+....+++++|+ .+||.+.+...                  
T Consensus       105 l~~~~F~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~~------------------  165 (411)
T COG2124         105 LLAPAFTPRALRGYRPLIREIADRLLDDLWQGGADLVLDFAAELTLRVIA-ELLGVPLEDRP------------------  165 (411)
T ss_pred             HhccccCHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHhhhhhHHHHH-HHhCCCHHHHH------------------
Confidence            99999999999999999999999999998324466778999999999999 99998665321                  


Q ss_pred             hhhhhHhhhhhhhhhhhhhccchhHHHhhhhhhchhhHHHHHhhhcCCCchHHHHHHhHHHHHHHHHHHHHHHHhhCCCc
Q 009299          228 EVSDFINQHIYSTTQLKMDLSGSLSIILGLLFPIIQEPFRQILKRIPGTMDWKFARTNKNLSGRLEEIVSKRMEETNTSS  307 (538)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~  307 (538)
                         .+.......               +....|.          ..+....++..++...+.+++.++|++|+   ....
T Consensus       166 ---~~~~~~~~~---------------~~~~~~~----------~~~~~~~~~~~~a~~~~~~~~~~li~~rR---~~~~  214 (411)
T COG2124         166 ---QLLRWSDAL---------------LLRLDPD----------LGPEEPWRRARAARRELDAYLRALIAERR---AAPR  214 (411)
T ss_pred             ---HHHHHHHHH---------------HhccCcc----------cCCcccHHHHHHHHHHHHHHHHHHHHHhc---cCCc
Confidence               111100000               0000010          11122345567788889999999999887   3478


Q ss_pred             chHHHHHHHhchhccccCCCCCHHhHHHHHHHHHhhchhHHHHHHHHHHHHHhcChHHHHHHHHHHHHcCCCCCCCChhh
Q 009299          308 KDFLSLILKARESETASKNIFTPDYISAVTYEHLLAGSATTAFTLSSVVYLVAGHPEVEKKVLAEIDAFGPHDQMPTAHD  387 (538)
Q Consensus       308 ~d~l~~ll~~~~~~~~~~~~lt~~~i~~~~~~~~~ag~dTts~tl~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~  387 (538)
                      +|+++.|+.+.++++.   .+|++|+.++++.+++||+|||+++++|+++.|+.||++++++++|.+             
T Consensus       215 ~dlls~l~~a~~~~~~---~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~-------------  278 (411)
T COG2124         215 DDLLSLLLSAEDDGGG---RLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPD-------------  278 (411)
T ss_pred             ccHHHHHHHHhhCCCC---cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcc-------------
Confidence            9999999988766432   499999999999999999999999999999999999999999999752             


Q ss_pred             hhhcCchHHHHHHHHhcCcCCCcccceecCCceeeCCEEeCCCCEEEecccccccCCCCCCCCCCCCCCCCCCCchhhhc
Q 009299          388 LQHKFPYLNQVIKEAMRVYLVSPLVARETSKEVKIGGYHLPKGTWVWLALGVLAKDPKNFPEPCKFKPERFDPNCEEEKR  467 (538)
Q Consensus       388 ~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~dp~~F~PeR~l~~~~~~~~  467 (538)
                          .||++++|+|+||++||++...|.+.+|++++|+.||||+.|+++++++||||++|+||++|||+||.        
T Consensus       279 ----~~~~~~~v~E~LR~~ppv~~~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~--------  346 (411)
T COG2124         279 ----RPLLEAVVEETLRLYPPVPLARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN--------  346 (411)
T ss_pred             ----hHHHHHHHHHHHHhCCchhccceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC--------
Confidence                28999999999999999999999999999999999999999999999999999999999999999997        


Q ss_pred             CCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHceeeeCCCCCCCccceeceeeeccCceEEEEEec
Q 009299          468 RHPYAFIPFGIGPRACIGQKFSLQEIKLSLIQLYRKCVFRHSPNMEKPLELEYGIVLNFKHGVKLTVKNR  537 (538)
Q Consensus       468 ~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  537 (538)
                         ..|+|||+|+|.|+|.+||++|++++++.++++|++....+ .  .......+..+..+.++.++.|
T Consensus       347 ---~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~-~--~~~~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         347 ---NAHLPFGGGPHRCLGAALARLELKVALAELLRRFPLLLLAE-P--PPLVRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             ---CCCcCCCCCCccccCHHHHHHHHHHHHHHHHHhCchhhcCC-C--CCccccccccCCCcceeeeecC
Confidence               36999999999999999999999999999999999987665 2  2233455566788888888765


No 33 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=70.65  E-value=1.8  Score=37.40  Aligned_cols=44  Identities=25%  Similarity=0.362  Sum_probs=34.5

Q ss_pred             cCchHHHHHHHHhcCcCCCcccceecCCceeeCCEEeCCCCEEEe
Q 009299          391 KFPYLNQVIKEAMRVYLVSPLVARETSKEVKIGGYHLPKGTWVWL  435 (538)
Q Consensus       391 ~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~G~~v~~  435 (538)
                      .-..+.|||.|+.-+..-. .+.-...+|+.++|..|||||.|.-
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs-~vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGS-RVRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeCCC-EEEEEEcCceEECCEEeCCCCEEEE
Confidence            4567889999998775432 3555678999999999999999865


No 34 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=59.01  E-value=36  Score=21.68  Aligned_cols=42  Identities=14%  Similarity=0.139  Sum_probs=33.8

Q ss_pred             hHHHHHHHHHhhchhHHHHHHHHHHHHHhcChHHHHHHHHHH
Q 009299          332 YISAVTYEHLLAGSATTAFTLSSVVYLVAGHPEVEKKVLAEI  373 (538)
Q Consensus       332 ~i~~~~~~~~~ag~dTts~tl~~~l~~L~~~P~~~~kl~~Ei  373 (538)
                      ++...+..++-.|.|..+.++.-.|.+.--||+.+..+-.|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            455566666777888888888888888889999999888876


No 35 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=53.11  E-value=11  Score=25.27  Aligned_cols=8  Identities=50%  Similarity=1.016  Sum_probs=6.2

Q ss_pred             CCCCCCCC
Q 009299          454 KPERFDPN  461 (538)
Q Consensus       454 ~PeR~l~~  461 (538)
                      ||||||.-
T Consensus        44 DPERWLP~   51 (59)
T PF08492_consen   44 DPERWLPK   51 (59)
T ss_pred             CccccCch
Confidence            88899863


No 36 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=49.98  E-value=5.3  Score=38.75  Aligned_cols=44  Identities=20%  Similarity=0.224  Sum_probs=34.7

Q ss_pred             cCchHHHHHHHHhcCcCCCcccceecCCceeeCCEEeCCCCEEEe
Q 009299          391 KFPYLNQVIKEAMRVYLVSPLVARETSKEVKIGGYHLPKGTWVWL  435 (538)
Q Consensus       391 ~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~G~~v~~  435 (538)
                      .-..+.|||.|+.=+.--. .+.-...+|+.++|..|||||.|.-
T Consensus       254 ~~n~I~A~V~~~qtv~~G~-~vrlRLle~~~v~~~~ipkgt~l~g  297 (410)
T TIGR03779       254 ERNTIRACVHETQTVVDGS-AVKLRLLEPIQAGDLVIPKGTVLYG  297 (410)
T ss_pred             CCCceEEEEcCceEEecCC-EEEEEEcCceeeCCEEecCCCEEEE
Confidence            4678889999988876432 3555678999999999999999764


No 37 
>PF15300 INT_SG_DDX_CT_C:  INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=43.50  E-value=26  Score=24.01  Aligned_cols=45  Identities=20%  Similarity=0.316  Sum_probs=26.5

Q ss_pred             ChHHHHHHHHHHHHcCCCCCCCC------hhhhhhcCchHHHHHHHHhcCc
Q 009299          362 HPEVEKKVLAEIDAFGPHDQMPT------AHDLQHKFPYLNQVIKEAMRVY  406 (538)
Q Consensus       362 ~P~~~~kl~~Ei~~~~~~~~~~~------~~~~~~~lpyl~a~i~E~lRl~  406 (538)
                      |-++...+..||+..+.+.....      ..++..+..+++.||+|++|+.
T Consensus         4 N~~ik~ql~keIRrpGr~ye~iF~lL~~vqG~~~~r~~fv~~~IkEA~RFk   54 (65)
T PF15300_consen    4 NADIKSQLMKEIRRPGRNYEKIFKLLEQVQGPLEVRKQFVEMIIKEAARFK   54 (65)
T ss_pred             hHHHHHHHHHHHHccCCcHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHH
Confidence            44666777777776543311100      0011125678999999999974


No 38 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=43.34  E-value=21  Score=23.64  Aligned_cols=22  Identities=23%  Similarity=0.341  Sum_probs=17.4

Q ss_pred             HHHHHhcChHHHHHHHHHHHHc
Q 009299          355 VVYLVAGHPEVEKKVLAEIDAF  376 (538)
Q Consensus       355 ~l~~L~~~P~~~~kl~~Ei~~~  376 (538)
                      .+.||..||++.+++.+.-.++
T Consensus         5 iV~YLv~nPevl~kl~~g~asL   26 (57)
T PF05952_consen    5 IVNYLVQNPEVLEKLKEGEASL   26 (57)
T ss_pred             HHHHHHHChHHHHHHHcCCeeE
Confidence            4678999999999998754443


No 39 
>PRK06789 flagellar motor switch protein; Validated
Probab=40.26  E-value=44  Score=23.63  Aligned_cols=39  Identities=10%  Similarity=0.092  Sum_probs=30.5

Q ss_pred             HHHHhcCcCCCcc-cceecCCce--eeCCEEeCCCCEEEecc
Q 009299          399 IKEAMRVYLVSPL-VARETSKEV--KIGGYHLPKGTWVWLAL  437 (538)
Q Consensus       399 i~E~lRl~p~~~~-~~R~~~~d~--~~~g~~Ip~G~~v~~~~  437 (538)
                      ++|.+.+.+-+-. +-|.+.+++  .++|..|.+|..|.++-
T Consensus        22 i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~~   63 (74)
T PRK06789         22 IEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKNG   63 (74)
T ss_pred             HHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEECC
Confidence            7889999886654 677776664  45999999999998763


No 40 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=38.33  E-value=30  Score=27.59  Aligned_cols=22  Identities=32%  Similarity=0.600  Sum_probs=16.4

Q ss_pred             CCcchHHHHHHHHHHHHHHHHH
Q 009299          482 ACIGQKFSLQEIKLSLIQLYRK  503 (538)
Q Consensus       482 ~C~G~~~A~~e~~~~la~ll~~  503 (538)
                      .|.|+.||+.++-.++.+|+..
T Consensus        19 N~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   19 NCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             ETTS----HHHHHHHHHHHHHS
T ss_pred             cccchHHHHHHHHHHHHHHhcC
Confidence            7999999999999999999864


No 41 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=35.23  E-value=17  Score=23.48  Aligned_cols=11  Identities=45%  Similarity=0.927  Sum_probs=9.1

Q ss_pred             cccCCCCCCCc
Q 009299          474 IPFGIGPRACI  484 (538)
Q Consensus       474 ~pFg~G~r~C~  484 (538)
                      -+||.|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            36999999985


No 42 
>PF05524 PEP-utilisers_N:  PEP-utilising enzyme, N-terminal;  InterPro: IPR008731  This sequence identifies proteins which are a component of the phosphoenolpyruvate:sugar phosphotransferase system (PTS), a major carbohydrate active transport system. The PTS system is found throughout the bacterial kingdom, and is responsible for the coupled phosphorylation and translocation of numerous sugars across the cytoplasmic membrane []. This entry represents the N-terminal domain of enzyme I (EIN) which transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) which in turn phosphorylates a group of membrane-associated proteins, known as enzyme II. The N-terminal domain of EI (EIN) extends from residues 1 to 259 and can be phosphorylated in a fully reversible manner by phosphorylated HPr. EIN, however, cannot be autophosphorylated by PEP [, ].; GO: 0005351 sugar:hydrogen symporter activity, 0008965 phosphoenolpyruvate-protein phosphotransferase activity, 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0005737 cytoplasm; PDB: 2WQD_A 2XDF_B 2HWG_A 3EZB_A 2L5H_A 3EZA_A 1EZB_A 2EZA_A 1EZA_A 1EZC_A ....
Probab=32.00  E-value=2.5e+02  Score=22.02  Aligned_cols=65  Identities=9%  Similarity=0.176  Sum_probs=35.6

Q ss_pred             HHHHhHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHhchhccccCCCCCHHhHHHHHHHHHhhchhHHHHHHHHHH
Q 009299          281 FARTNKNLSGRLEEIVSKRMEETNTSSKDFLSLILKARESETASKNIFTPDYISAVTYEHLLAGSATTAFTLSSVV  356 (538)
Q Consensus       281 ~~~~~~~~~~~~~~~i~~r~~~~~~~~~d~l~~ll~~~~~~~~~~~~lt~~~i~~~~~~~~~ag~dTts~tl~~~l  356 (538)
                      +.++.......++++.+.-....+....++++..+..          +.+.++...+...+-.|. |...++.-.+
T Consensus        40 l~~Al~~~~~eL~~l~~~~~~~~~~~~a~If~ah~~~----------L~D~~l~~~v~~~I~~~~-~Ae~Av~~~~  104 (123)
T PF05524_consen   40 LEQALEKAREELEQLAERAESKLGEEEAAIFEAHLMM----------LEDPELIDEVEELIREGK-NAEYAVQEVI  104 (123)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCHSSCTHHHHHHHHH----------HT-HHHHHHHHHHHHHH---HHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHH----------hcCHhHHHHHHHHHhccC-CHHHHHHHHH
Confidence            3444444444444444443333334445777666543          677888888888887777 6666555444


No 43 
>COG4459 NapE Periplasmic nitrate reductase system, NapE component [Energy production and conversion]
Probab=28.83  E-value=31  Score=22.50  Aligned_cols=11  Identities=36%  Similarity=0.673  Sum_probs=6.9

Q ss_pred             ccccCCCCCCC
Q 009299           47 WKVRRVPGPPA   57 (538)
Q Consensus        47 ~~~~~~PgP~~   57 (538)
                      +-+-.+|||++
T Consensus        51 QiifGPPGpp~   61 (62)
T COG4459          51 QIIFGPPGPPG   61 (62)
T ss_pred             HHHhCCCCCCC
Confidence            34567777764


No 44 
>PTZ00370 STEVOR; Provisional
Probab=26.09  E-value=63  Score=29.60  Aligned_cols=19  Identities=5%  Similarity=0.153  Sum_probs=9.7

Q ss_pred             HHHHHHHHHHHHHHHhhcc
Q 009299           28 IFTVLAILAGVLGYLYGPY   46 (538)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~   46 (538)
                      +++++++++++++|+|.++
T Consensus       262 lvllil~vvliilYiwlyr  280 (296)
T PTZ00370        262 LVLLILAVVLIILYIWLYR  280 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            4444455555555555443


No 45 
>PF05961 Chordopox_A13L:  Chordopoxvirus A13L protein;  InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=25.83  E-value=1.3e+02  Score=20.60  Aligned_cols=22  Identities=14%  Similarity=0.170  Sum_probs=9.6

Q ss_pred             HHHHHHHHHHHHHHHHhhcccc
Q 009299           27 MIFTVLAILAGVLGYLYGPYWK   48 (538)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~   48 (538)
                      ++++++++++.+++|-.+.+.+
T Consensus         6 iLi~ICVaii~lIlY~iYnr~~   27 (68)
T PF05961_consen    6 ILIIICVAIIGLILYGIYNRKK   27 (68)
T ss_pred             HHHHHHHHHHHHHHHHHHhccc
Confidence            3344444444444444434333


No 46 
>PRK13713 conjugal transfer protein TraM; Provisional
Probab=23.80  E-value=3.6e+02  Score=21.08  Aligned_cols=78  Identities=21%  Similarity=0.309  Sum_probs=43.5

Q ss_pred             HHHHHHHHHHHHHHHhhCCCc----chHHHHHHHh----chhc-cccCCCCCHHhHHHHHHHHHhhchhHHHHHHH--HH
Q 009299          287 NLSGRLEEIVSKRMEETNTSS----KDFLSLILKA----RESE-TASKNIFTPDYISAVTYEHLLAGSATTAFTLS--SV  355 (538)
Q Consensus       287 ~~~~~~~~~i~~r~~~~~~~~----~d~l~~ll~~----~~~~-~~~~~~lt~~~i~~~~~~~~~ag~dTts~tl~--~~  355 (538)
                      ...+-+..++++|++++.++.    .+..+.|++.    +... ...+.++...+.--.++..+.-...|++..+.  .+
T Consensus         4 ~v~e~I~~iVe~RrqEGA~~~Dvs~SSv~sMLLELGLRVYeaQ~erkes~Fnq~eFnK~lLE~v~kt~~~~~~IL~~~~l   83 (118)
T PRK13713          4 EVYEKINAIVEERRQEGAREKDVSFSSVASMLLELGLRVYEAQMERKESGFNQTEFNKLLLECVVKTQSTVAKILGIESL   83 (118)
T ss_pred             HHHHHHHHHHHHHHHcCCCccCccHHHHHHHHHHHhHHHHHHHHHhhcCcccHHHHHHHHHHHHHHHHHHHHHHHccccc
Confidence            345567788898888865433    3455556542    1111 01134588888777777766665555554442  23


Q ss_pred             HHHHhcChH
Q 009299          356 VYLVAGHPE  364 (538)
Q Consensus       356 l~~L~~~P~  364 (538)
                      .-++..+|.
T Consensus        84 sp~v~~~~~   92 (118)
T PRK13713         84 SPHVSGNPK   92 (118)
T ss_pred             cHhhcCCCc
Confidence            345555554


No 47 
>PF05084 GRA6:  Granule antigen protein (GRA6);  InterPro: IPR008119  Toxoplasma gondii is an obligate intracellular apicomplexan protozoan parasite, with a complex lifestyle involving varied hosts []. It has two phases of growth: an intestinal phase in feline hosts, and an extra-intestinal phase in other mammals. Oocysts from infected cats develop into tachyzoites, and eventually, bradyzoites and zoitocysts in the extraintestinal host []. Transmission of the parasite occurs through contact with infected cats or raw/undercooked meat; in immunocompromised individuals, it can cause severe and often lethal toxoplasmosis. Acute infection in healthy humans can sometimes also cause tissue damage [].  The protozoan utilises a variety of secretory and antigenic proteins to invade a host and gain access to the intracellular environment []. These originate from distinct organelles in the T. gondii cell termed micronemes, rhoptries, and dense granules. They are released at specific times during invasion to ensure the proteins are allocated to their correct target destinations []. Dense granule antigens (GRAs) are released from the T. gondii tachyzoite while still encapsulated in a host vacuole. Gra6, one of these moieties, is associated with the parasitophorous vacuole []. It possesses a hydrophobic central region flanked by two hydrophilic domains, and is present as a single copy gene in the Toxoplasma gondii genome []. Gra6 shares a similar function with Gra2, in that it is rapidly targeted to a network of membranous tubules that connect with the vacuolar membrane []. Indeed, these two proteins, together with Gra4, form a multimeric complex that stabilises the parasite within the vacuole.
Probab=22.93  E-value=1.3e+02  Score=24.63  Aligned_cols=35  Identities=23%  Similarity=0.264  Sum_probs=20.3

Q ss_pred             HHHHHHHHHHHHHHhhccccccCCCCCCC---CCcccc
Q 009299           29 FTVLAILAGVLGYLYGPYWKVRRVPGPPA---IPLVGH   63 (538)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~PgP~~---~p~~G~   63 (538)
                      .+++++.+..|++++.++...+.+|-|.+   .|--|+
T Consensus       156 ~~VlA~~VA~L~~~F~RR~~rrsppepsgdgG~~~~G~  193 (215)
T PF05084_consen  156 AVVLAVSVAMLTWFFLRRTGRRSPPEPSGDGGGNDAGN  193 (215)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCcccc
Confidence            34444555556666666566778887763   444443


No 48 
>PHA03049 IMV membrane protein; Provisional
Probab=21.46  E-value=2e+02  Score=19.72  Aligned_cols=19  Identities=11%  Similarity=0.305  Sum_probs=9.0

Q ss_pred             HHHHHHHHHHHHHHHHhhc
Q 009299           27 MIFTVLAILAGVLGYLYGP   45 (538)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~   45 (538)
                      ++++++++++.+++|-.+.
T Consensus         6 ~l~iICVaIi~lIvYgiYn   24 (68)
T PHA03049          6 ILVIICVVIIGLIVYGIYN   24 (68)
T ss_pred             HHHHHHHHHHHHHHHHHHh
Confidence            3444444445555554433


No 49 
>PF07886 BA14K:  BA14K-like protein;  InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process []. 
Probab=21.42  E-value=69  Score=18.23  Aligned_cols=16  Identities=19%  Similarity=0.409  Sum_probs=13.1

Q ss_pred             CCCcccccCCCCCCCc
Q 009299          469 HPYAFIPFGIGPRACI  484 (538)
Q Consensus       469 ~~~~~~pFg~G~r~C~  484 (538)
                      ..+.|+|+++..|.|.
T Consensus        16 ~~~Ty~~~~G~r~~C~   31 (31)
T PF07886_consen   16 RDNTYQPYDGPRRFCR   31 (31)
T ss_pred             CCCcEeCCCCccccCc
Confidence            3468999999999994


No 50 
>PF05545 FixQ:  Cbb3-type cytochrome oxidase component FixQ;  InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=20.30  E-value=1.5e+02  Score=18.80  Aligned_cols=19  Identities=16%  Similarity=0.441  Sum_probs=9.6

Q ss_pred             HHHHHHHHHHHHHHHhhcc
Q 009299           28 IFTVLAILAGVLGYLYGPY   46 (538)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~   46 (538)
                      .+++.++++.++.|.+++.
T Consensus        15 ~v~~~~~F~gi~~w~~~~~   33 (49)
T PF05545_consen   15 TVLFFVFFIGIVIWAYRPR   33 (49)
T ss_pred             HHHHHHHHHHHHHHHHccc
Confidence            3444444555555555543


No 51 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=20.04  E-value=2e+02  Score=28.76  Aligned_cols=17  Identities=12%  Similarity=0.551  Sum_probs=11.2

Q ss_pred             HhCCeeEEEeCCccEEE
Q 009299           81 RYGPIFRFHMGRQPLII   97 (538)
Q Consensus        81 ~yG~v~~i~~~~~~~v~   97 (538)
                      +||.|++-.+-++.+-|
T Consensus       222 rfg~V~KaqL~~~~VAV  238 (534)
T KOG3653|consen  222 RFGCVWKAQLDNRLVAV  238 (534)
T ss_pred             ccceeehhhccCceeEE
Confidence            67888777766665433


Done!