Your job contains 1 sequence.
>009302
MVDDRLLERERQQIEQIRQLDFEELQVEEVDDFHDSSDDDDRAATGADSSNQLTFDTCLA
SLHTYLGDVEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPLRVIKPNFIAAAERAL
SQVDVPYTIGVVRVFREPDNGRITFATIGTTAEIRQYRRLEDGSLNVVTRGQQRFRLRRR
WIDVEGVPCGEIQIIQEDLPLRTPRDVFETLGCVSNLSQSLSHTLPSNSSSRGYGIRDND
SDATSEESFESELSPTERRIHQSVIDFAYGCDIMDESTSSDDDKSAFQSDIQSRRPHLND
SDSIGNWKQSENVGLRIGKSSALGRQSHRGEGSKMCWRNELSQFRRTSRAFLPHWVYRMY
DSYCLAQRAADKWKQIVGTPNMDGLVKKPDLLSFYIASKIPVSESTRQELLEIDGVSYRL
RREIELLESFDLVRCKTCKTAIAKRSDMLVMSSEGPLGAYVNPHGCVHEILTLNKANGLA
LYGPAETEYSWFPGYAWTVASCSICETHMGWLFTATKKKLKPKSFWGIRSSQVAEGTC
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009302
(538 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2043500 - symbol:AT2G25740 species:3702 "Arabi... 1380 4.3e-141 1
ZFIN|ZDB-GENE-040822-43 - symbol:crbn "cereblon" species:... 396 3.2e-52 3
UNIPROTKB|Q5R6Y2 - symbol:CRBN "Protein cereblon" species... 404 9.8e-50 2
UNIPROTKB|Q96SW2 - symbol:CRBN "Protein cereblon" species... 404 1.3e-49 2
UNIPROTKB|Q0P564 - symbol:CRBN "Protein cereblon" species... 403 2.6e-49 2
MGI|MGI:1913277 - symbol:Crbn "cereblon" species:10090 "M... 400 1.8e-48 2
RGD|1310533 - symbol:Crbn "cereblon" species:10116 "Rattu... 399 1.8e-48 2
UNIPROTKB|P0CF65 - symbol:CRBN "Protein cereblon" species... 399 2.3e-48 2
UNIPROTKB|F1P3S5 - symbol:CRBN "Protein cereblon" species... 389 2.6e-47 2
UNIPROTKB|Q640S2 - symbol:crbn "Protein cereblon" species... 394 5.3e-47 2
UNIPROTKB|F1SFL6 - symbol:CRBN "Uncharacterized protein" ... 261 1.4e-30 2
UNIPROTKB|J3QT87 - symbol:CRBN "Protein cereblon" species... 152 6.1e-17 2
WB|WBGene00010891 - symbol:M18.6 species:6239 "Caenorhabd... 187 1.2e-11 1
UNIPROTKB|J3QT51 - symbol:CRBN "Protein cereblon" species... 130 5.7e-06 1
>TAIR|locus:2043500 [details] [associations]
symbol:AT2G25740 species:3702 "Arabidopsis thaliana"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] InterPro:IPR003111 Pfam:PF02190
SMART:SM00464 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006508
InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0004176 eggNOG:NOG313031
KO:K11793 EMBL:BT021104 IPI:IPI00538676 RefSeq:NP_850069.1
UniGene:At.38982 ProteinModelPortal:Q5E916 SMR:Q5E916 PRIDE:Q5E916
EnsemblPlants:AT2G25740.1 GeneID:817117 KEGG:ath:AT2G25740
TAIR:At2g25740 HOGENOM:HOG000005802 InParanoid:Q5E916 OMA:QSEANSE
PhylomeDB:Q5E916 ProtClustDB:CLSN2690918 Genevestigator:Q5E916
Uniprot:Q5E916
Length = 547
Score = 1380 (490.8 bits), Expect = 4.3e-141, P = 4.3e-141
Identities = 290/536 (54%), Positives = 360/536 (67%)
Query: 21 DFEELQVEEVXXXXXXXX------------XXXXXXXXXXXXNQLTFDTCLASLHTYLGD 68
DFEELQVEEV ++L F+ LASLH YLG+
Sbjct: 21 DFEELQVEEVDDLHDSDSDDNNDDLSSFPFSSHAQASGNLGDDELMFNPALASLHMYLGE 80
Query: 69 VEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYT 128
VEDT NR++F++GG +L +PLFYL+GVVLFPEATLPLR+I+P+F+AA ERAL+Q + P T
Sbjct: 81 VEDTQNRVSFVDGGTVLKIPLFYLEGVVLFPEATLPLRIIQPSFLAAVERALNQANAPST 140
Query: 129 IGVVRVFREPDNGRITFATIGTTAEIRQYRRLEDGSLNVVTXXXXXXXXXXXWIDVEGVP 188
IGV+RV+RE + +A++GTTAEIRQYRRL DGS NV+T W DVEG
Sbjct: 141 IGVIRVYRE--GAQFKYASVGTTAEIRQYRRLGDGSFNVITRGQQRFRLKHRWTDVEGFT 198
Query: 189 CGEIQIIQEDLPLRTPRDVFETLGCVSNLXXXXXXXXXXXXXXRGYGIRDND--SDATSE 246
CGE+QI+ ED+PLRTPRD F L +S L +RD D S+A SE
Sbjct: 199 CGEVQIVDEDVPLRTPRDAFGKLVPLSKLRGRYPLGTASLSTP----LRDMDAQSEANSE 254
Query: 247 ESFESELSPTERRIHQSVIDFAYGCDIMDESTSSDDDKSAFQSDIQSRRPHLNDSDSIG- 305
ESFES LSP+E+R+H SV+D + C+ STSSDDD+ S +QS + SIG
Sbjct: 255 ESFESALSPSEKRLHYSVVDSIF-CN----STSSDDDQVVSTSTVQSSGSNPYSLRSIGC 309
Query: 306 ----NWKQSENVGLRIGKSSALGRQSHRGEGSKMCWRN--ELSQFRRTSRAFLPHWVYRM 359
+ ++E+ IGK+ + ++ ++ + +R +LS+FR T RAF P W YRM
Sbjct: 310 LASSHDNENEDEQSAIGKTP-VSQEKYQKQNRLASFRQNTDLSRFRMTPRAFWPFWAYRM 368
Query: 360 YDSYCLAQRAADKWKQIVGTPNMDGLVKKPDLLSFYIASKIPVSESTRQELLEIDGVSYR 419
+DSY LAQRA D WKQIVG PNM+ V KPD+LSF IASKIPVSES RQELLE+DGVSYR
Sbjct: 369 FDSYYLAQRAVDLWKQIVGVPNMEAFVNKPDILSFSIASKIPVSESIRQELLELDGVSYR 428
Query: 420 LRREIELLESFDLVRCKTCKTAIAKRSDMLVMSSEGPLGAYVNPHGCVHEILTLNKANGL 479
L+REIELLESFD VRC C+T IA+R DMLVMS+EGPLGAYVNPHG VHEI+T KAN +
Sbjct: 429 LQREIELLESFDRVRCIHCQTVIARRKDMLVMSNEGPLGAYVNPHGYVHEIMTFYKANDI 488
Query: 480 ALYGPAETEYSWFPGYAWTVASCSICETHMGWLFTATKKKLKPKSFWGIRSSQVAE 535
AL G + SWFPGYAWT+A+C+ CET +GW FTAT KKLKP SFW +R SQVA+
Sbjct: 489 ALRGRPVKKDSWFPGYAWTIANCATCETQLGWHFTATNKKLKPSSFWAVRGSQVAD 544
>ZFIN|ZDB-GENE-040822-43 [details] [associations]
symbol:crbn "cereblon" species:7955 "Danio rerio"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0035118 "embryonic
pectoral fin morphogenesis" evidence=IMP] [GO:0071600 "otic vesicle
morphogenesis" evidence=IMP] [GO:0060173 "limb development"
evidence=IMP] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] InterPro:IPR003111
Pfam:PF02190 ZFIN:ZDB-GENE-040822-43 GO:GO:0006508
InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0000151 GO:GO:0035118
GO:GO:0004176 GeneTree:ENSGT00390000016404 GO:GO:0071600
EMBL:BX936393 IPI:IPI00639664 Ensembl:ENSDART00000062724
Bgee:F1QCS1 Uniprot:F1QCS1
Length = 446
Score = 396 (144.5 bits), Expect = 3.2e-52, Sum P(3) = 3.2e-52
Identities = 78/200 (39%), Positives = 113/200 (56%)
Query: 334 KMCWRN-ELSQFRRTSRAFLPHWVYRMYDSYCLAQRAADKWKQIVGTPNMDGLVKKPDLL 392
K C +N + S P WVY +YDS L R + + + L P
Sbjct: 226 KRCSQNYRQKKLHCASMTSWPPWVYSLYDSKTLMSRVKKQLHEWDENLKDESLPTNPTDF 285
Query: 393 SFYIASKIPVSESTRQELLEIDGVSYRLRREIELLESFDLVRCKTCK-TAIAKRSDMLVM 451
S+ +A+ +P+ ++ R +LL+I RLR E+++++ + CK C+ T I ++++ +
Sbjct: 286 SYRVAACLPIDDALRLQLLKIGSAIQRLRCELDIMDRCTSLCCKQCQDTEITSKNEIFSL 345
Query: 452 SSEGPLGAYVNPHGCVHEILTLNKANGLALYGPAETEYSWFPGYAWTVASCSICETHMGW 511
S GP+ AYVNPHG VHE LT+ KA+ L L G T +SWFPGYAWT+A C C +HMGW
Sbjct: 346 SLYGPMAAYVNPHGYVHETLTVYKASNLNLIGRPSTLHSWFPGYAWTIAQCRTCSSHMGW 405
Query: 512 LFTATKKKLKPKSFWGIRSS 531
F+A KK L P FWG+ S
Sbjct: 406 KFSAVKKDLSPPRFWGLTRS 425
Score = 137 (53.3 bits), Expect = 3.2e-52, Sum P(3) = 3.2e-52
Identities = 38/118 (32%), Positives = 61/118 (51%)
Query: 53 LTFDTCLASLHTYLG-DVEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPLRVIKPN 111
+ FDT L + H YLG D+E+ H R E ++ LP+ ++L P TLPL++ +P
Sbjct: 50 INFDTSLPTSHAYLGSDMEEFHGRTLHDED-SVQNLPVLPHVALILIPGQTLPLQLFRPQ 108
Query: 112 FIAAAERALSQVDVPYTIGVVRVFREPD-NGRITFATIGTTAEIRQYRRLEDGSLNVV 168
++ +SQ D + + + PD +G T A GTTAEI +R ++ + V
Sbjct: 109 EVSMFRNLVSQ-DRTFAV----LAHSPDPSGTETKAEFGTTAEIYAFREEQEYGIETV 161
Score = 37 (18.1 bits), Expect = 3.2e-52, Sum P(3) = 3.2e-52
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 307 WKQSENVGLRIGKSSALGRQSHR 329
+++ + G+ K A+GRQ R
Sbjct: 150 FREEQEYGIETVKIKAVGRQRFR 172
>UNIPROTKB|Q5R6Y2 [details] [associations]
symbol:CRBN "Protein cereblon" species:9601 "Pongo abelii"
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0031464 "Cul4A-RING ubiquitin ligase complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003111 Pfam:PF02190
SMART:SM00464 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0016020 GO:GO:0016567 InterPro:IPR015947
SUPFAM:SSF88697 GO:GO:0004176 CTD:51185 HOVERGEN:HBG054571
KO:K11793 GO:GO:0031464 EMBL:CR860344 RefSeq:NP_001127555.1
UniGene:Pab.18764 ProteinModelPortal:Q5R6Y2 GeneID:100174633
KEGG:pon:100174633 InParanoid:Q5R6Y2 Uniprot:Q5R6Y2
Length = 429
Score = 404 (147.3 bits), Expect = 9.8e-50, Sum P(2) = 9.8e-50
Identities = 80/207 (38%), Positives = 118/207 (57%)
Query: 327 SHRGEGSKMCWRN-ELSQFRRTSRAFLPHWVYRMYDSYCLAQRAADKWKQIVGTPNMDGL 385
S + S W+ + +F + P W+Y +YD+ L R + ++ D L
Sbjct: 201 SREDQCSYKWWQKYQKRKFHCANLTSWPRWLYSLYDAETLMDRIKKQLREWDENLKDDSL 260
Query: 386 VKKPDLLSFYIASKIPVSESTRQELLEIDGVSYRLRREIELLESFDLVRCKTCK-TAIAK 444
P S+ +A+ +P+ + R +LL+I RLR E++++ + CK C+ T I
Sbjct: 261 PSNPIDFSYRVAACLPIDDVLRIQLLKIGSAIQRLRCELDIMNKCTSLCCKQCQETEITT 320
Query: 445 RSDMLVMSSEGPLGAYVNPHGCVHEILTLNKANGLALYGPAETEYSWFPGYAWTVASCSI 504
++++ +S GP+ AYVNPHG VHE LT+ KA L L G TE+SWFPGYAWTVA C I
Sbjct: 321 KNEIFSLSLCGPMAAYVNPHGYVHETLTVYKACNLNLIGRPSTEHSWFPGYAWTVAQCKI 380
Query: 505 CETHMGWLFTATKKKLKPKSFWGIRSS 531
C +H+GW FTATKK + P+ FWG+ S
Sbjct: 381 CASHIGWKFTATKKDMSPQKFWGLTRS 407
Score = 131 (51.2 bits), Expect = 9.8e-50, Sum P(2) = 9.8e-50
Identities = 38/119 (31%), Positives = 59/119 (49%)
Query: 51 NQLTFDTCLASLHTYLG-DVEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPLRVIK 109
N + FDT L + HTYLG D+E+ H R + + +P+ ++L P TLPL++
Sbjct: 32 NIINFDTSLPTSHTYLGADMEEFHGRTLH-DDDSCQVIPVLPQVMMILIPGQTLPLQLFH 90
Query: 110 PNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITFATIGTTAEIRQYRRLEDGSLNVV 168
P ++ R L Q D + + +E + A GTTAEI YR +D + +V
Sbjct: 91 PQEVSMV-RNLIQKDRTFAVLAYSNIQERE------AQFGTTAEIYAYREEQDFGIEIV 142
Score = 57 (25.1 bits), Expect = 5.9e-42, Sum P(2) = 5.9e-42
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 289 SDIQSRRPHLNDSDSIGNWKQSENVGLRIGKSSALGRQ 326
S+IQ R + I +++ ++ G+ I K A+GRQ
Sbjct: 113 SNIQEREAQFGTTAEIYAYREEQDFGIEIVKVKAIGRQ 150
>UNIPROTKB|Q96SW2 [details] [associations]
symbol:CRBN "Protein cereblon" species:9606 "Homo sapiens"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
[GO:0032463 "negative regulation of protein homooligomerization"
evidence=IEA] [GO:0034766 "negative regulation of ion transmembrane
transport" evidence=IEA] [GO:0090073 "positive regulation of
protein homodimerization activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR003111 Pfam:PF02190 SMART:SM00464 UniPathway:UPA00143
GO:GO:0005737 GO:GO:0005730 GO:GO:0043161 GO:GO:0016020
GO:GO:0016567 InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0032463
Orphanet:88616 Orphanet:1620 GO:GO:0004176 CTD:51185
eggNOG:NOG313031 HOGENOM:HOG000067866 HOVERGEN:HBG054571 KO:K11793
OMA:IRTQSDG OrthoDB:EOG44XJGR GO:GO:0031464 EMBL:AK027507
EMBL:AK312577 EMBL:AC024060 EMBL:BC017419 EMBL:BC067811
EMBL:AF117230 EMBL:CR627060 IPI:IPI00045917 IPI:IPI00641620
RefSeq:NP_001166953.1 RefSeq:NP_057386.2 UniGene:Hs.18925
ProteinModelPortal:Q96SW2 IntAct:Q96SW2 STRING:Q96SW2
PhosphoSite:Q96SW2 DMDM:73918916 PaxDb:Q96SW2 PRIDE:Q96SW2
DNASU:51185 Ensembl:ENST00000231948 Ensembl:ENST00000432408
GeneID:51185 KEGG:hsa:51185 UCSC:uc003bpq.3 UCSC:uc003bpr.3
GeneCards:GC03M003166 HGNC:HGNC:30185 HPA:HPA045910 MIM:607417
MIM:609262 neXtProt:NX_Q96SW2 PharmGKB:PA134926851
InParanoid:Q96SW2 PhylomeDB:Q96SW2 GenomeRNAi:51185 NextBio:54159
ArrayExpress:Q96SW2 Bgee:Q96SW2 CleanEx:HS_CRBN
Genevestigator:Q96SW2 GermOnline:ENSG00000113851 GO:GO:0034766
GO:GO:0090073 Uniprot:Q96SW2
Length = 442
Score = 404 (147.3 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 80/207 (38%), Positives = 118/207 (57%)
Query: 327 SHRGEGSKMCWRN-ELSQFRRTSRAFLPHWVYRMYDSYCLAQRAADKWKQIVGTPNMDGL 385
S + S W+ + +F + P W+Y +YD+ L R + ++ D L
Sbjct: 214 SREDQCSYKWWQKYQKRKFHCANLTSWPRWLYSLYDAETLMDRIKKQLREWDENLKDDSL 273
Query: 386 VKKPDLLSFYIASKIPVSESTRQELLEIDGVSYRLRREIELLESFDLVRCKTCK-TAIAK 444
P S+ +A+ +P+ + R +LL+I RLR E++++ + CK C+ T I
Sbjct: 274 PSNPIDFSYRVAACLPIDDVLRIQLLKIGSAIQRLRCELDIMNKCTSLCCKQCQETEITT 333
Query: 445 RSDMLVMSSEGPLGAYVNPHGCVHEILTLNKANGLALYGPAETEYSWFPGYAWTVASCSI 504
++++ +S GP+ AYVNPHG VHE LT+ KA L L G TE+SWFPGYAWTVA C I
Sbjct: 334 KNEIFSLSLCGPMAAYVNPHGYVHETLTVYKACNLNLIGRPSTEHSWFPGYAWTVAQCKI 393
Query: 505 CETHMGWLFTATKKKLKPKSFWGIRSS 531
C +H+GW FTATKK + P+ FWG+ S
Sbjct: 394 CASHIGWKFTATKKDMSPQKFWGLTRS 420
Score = 130 (50.8 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 38/119 (31%), Positives = 59/119 (49%)
Query: 51 NQLTFDTCLASLHTYLG-DVEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPLRVIK 109
N + FDT L + HTYLG D+E+ H R + + +P+ ++L P TLPL++
Sbjct: 45 NIINFDTSLPTSHTYLGADMEEFHGRTLH-DDDSCQVIPVLPQVMMILIPGQTLPLQLFH 103
Query: 110 PNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITFATIGTTAEIRQYRRLEDGSLNVV 168
P ++ R L Q D + + +E + A GTTAEI YR +D + +V
Sbjct: 104 PQEVSMV-RNLIQKDRTFAVLAYSNVQERE------AQFGTTAEIYAYREEQDFGIEIV 155
Score = 56 (24.8 bits), Expect = 7.5e-42, Sum P(2) = 7.5e-42
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 289 SDIQSRRPHLNDSDSIGNWKQSENVGLRIGKSSALGRQ 326
S++Q R + I +++ ++ G+ I K A+GRQ
Sbjct: 126 SNVQEREAQFGTTAEIYAYREEQDFGIEIVKVKAIGRQ 163
>UNIPROTKB|Q0P564 [details] [associations]
symbol:CRBN "Protein cereblon" species:9913 "Bos taurus"
[GO:0031464 "Cul4A-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0016020 "membrane"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] InterPro:IPR003111
Pfam:PF02190 SMART:SM00464 UniPathway:UPA00143 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0016020 GO:GO:0016567
InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0004176 EMBL:BC120452
IPI:IPI00694957 RefSeq:NP_001068995.1 UniGene:Bt.91518
ProteinModelPortal:Q0P564 MINT:MINT-6823052 STRING:Q0P564
PRIDE:Q0P564 Ensembl:ENSBTAT00000026031 GeneID:511585
KEGG:bta:511585 CTD:51185 eggNOG:NOG313031
GeneTree:ENSGT00390000016404 HOGENOM:HOG000067866
HOVERGEN:HBG054571 InParanoid:Q0P564 KO:K11793 OMA:IRTQSDG
OrthoDB:EOG44XJGR NextBio:20870000 ArrayExpress:Q0P564
GO:GO:0031464 Uniprot:Q0P564
Length = 444
Score = 403 (146.9 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
Identities = 76/197 (38%), Positives = 116/197 (58%)
Query: 337 WRN-ELSQFRRTSRAFLPHWVYRMYDSYCLAQRAADKWKQIVGTPNMDGLVKKPDLLSFY 395
W+ + +F + P W+Y +YD+ L R + ++ D L P S+
Sbjct: 226 WQKYQKRKFHCANLTSWPRWLYSLYDAETLMDRIKKQLREWDENLKEDSLPSNPIDFSYR 285
Query: 396 IASKIPVSESTRQELLEIDGVSYRLRREIELLESFDLVRCKTCK-TAIAKRSDMLVMSSE 454
+A+ +P+ + R +LL+I RLR E++++ + CK C+ T I ++++ +S
Sbjct: 286 VAACLPIDDVLRIQLLKIGSAIQRLRCELDIMNKCTSLCCKQCQETEITTKNEIFSLSLC 345
Query: 455 GPLGAYVNPHGCVHEILTLNKANGLALYGPAETEYSWFPGYAWTVASCSICETHMGWLFT 514
GP+ AYVNPHG VHE LT+ KA+ L L G T++SWFPGYAWT+A C IC +H+GW FT
Sbjct: 346 GPMAAYVNPHGYVHETLTVYKASNLNLIGRPSTDHSWFPGYAWTIAQCRICASHIGWKFT 405
Query: 515 ATKKKLKPKSFWGIRSS 531
ATKK + P+ FWG+ S
Sbjct: 406 ATKKDMSPQKFWGLTRS 422
Score = 128 (50.1 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
Identities = 39/119 (32%), Positives = 58/119 (48%)
Query: 51 NQLTFDTCLASLHTYLG-DVEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPLRVIK 109
N + FDT L + HTYLG D+E+ H R + + +P+ + L P TLPL++
Sbjct: 47 NIINFDTSLPTSHTYLGSDMEEFHGRTLH-DDDSCPVIPVLPQVVMTLIPGQTLPLQLFS 105
Query: 110 PNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITFATIGTTAEIRQYRRLEDGSLNVV 168
P ++ R L Q D + + +E + A GTTAEI YR +D + VV
Sbjct: 106 PQEVSMV-RNLIQKDRTFAVLAYSNVQERE------AQFGTTAEIYAYREEQDFGIEVV 157
Score = 55 (24.4 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 289 SDIQSRRPHLNDSDSIGNWKQSENVGLRIGKSSALGRQ 326
S++Q R + I +++ ++ G+ + K A+GRQ
Sbjct: 128 SNVQEREAQFGTTAEIYAYREEQDFGIEVVKVKAIGRQ 165
>MGI|MGI:1913277 [details] [associations]
symbol:Crbn "cereblon" species:10090 "Mus musculus"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=ISO] [GO:0032463 "negative regulation of protein
homooligomerization" evidence=ISO] [GO:0034766 "negative regulation
of ion transmembrane transport" evidence=ISO] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0090073 "positive regulation of protein
homodimerization activity" evidence=ISO] InterPro:IPR003111
Pfam:PF02190 SMART:SM00464 UniPathway:UPA00143 MGI:MGI:1913277
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0016020
GO:GO:0016567 InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0032463
GO:GO:0004176 CTD:51185 eggNOG:NOG313031
GeneTree:ENSGT00390000016404 HOVERGEN:HBG054571 KO:K11793
OMA:IRTQSDG OrthoDB:EOG44XJGR GO:GO:0031464 GO:GO:0034766
GO:GO:0090073 EMBL:AK050557 EMBL:AK076144 EMBL:AK077707
EMBL:AK160219 EMBL:BC046967 EMBL:BC069905 EMBL:BC086488
EMBL:AF229032 IPI:IPI00123335 IPI:IPI00387238 IPI:IPI00956787
RefSeq:NP_067424.2 RefSeq:NP_780566.1 UniGene:Mm.290085
ProteinModelPortal:Q8C7D2 STRING:Q8C7D2 PhosphoSite:Q8C7D2
PaxDb:Q8C7D2 PRIDE:Q8C7D2 Ensembl:ENSMUST00000013882
Ensembl:ENSMUST00000049675 Ensembl:ENSMUST00000113239 GeneID:58799
KEGG:mmu:58799 UCSC:uc009dda.1 UCSC:uc009ddb.1 InParanoid:Q8C7D2
NextBio:314364 Bgee:Q8C7D2 CleanEx:MM_CRBN Genevestigator:Q8C7D2
GermOnline:ENSMUSG00000005362 Uniprot:Q8C7D2
Length = 445
Score = 400 (145.9 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 76/197 (38%), Positives = 116/197 (58%)
Query: 337 WRN-ELSQFRRTSRAFLPHWVYRMYDSYCLAQRAADKWKQIVGTPNMDGLVKKPDLLSFY 395
W+ + +F + P W+Y +YD+ L R + ++ D L + P S+
Sbjct: 227 WQKYQKRKFHCANLTSWPRWLYSLYDAETLMDRIKKQLREWDENLKDDSLPENPIDFSYR 286
Query: 396 IASKIPVSESTRQELLEIDGVSYRLRREIELLESFDLVRCKTCK-TAIAKRSDMLVMSSE 454
+A+ +P+ + R +LL+I RLR E++++ + CK C+ T I ++++ +S
Sbjct: 287 VAACLPIDDVLRIQLLKIGSAIQRLRCELDIMNKCTSLCCKQCQETEITTKNEIFSLSLC 346
Query: 455 GPLGAYVNPHGCVHEILTLNKANGLALYGPAETEYSWFPGYAWTVASCSICETHMGWLFT 514
GP+ AYVNPHG VHE LT+ KA+ L L G T +SWFPGYAWT+A C IC +H+GW FT
Sbjct: 347 GPMAAYVNPHGYVHETLTVYKASNLNLIGRPSTVHSWFPGYAWTIAQCKICASHIGWKFT 406
Query: 515 ATKKKLKPKSFWGIRSS 531
ATKK + P+ FWG+ S
Sbjct: 407 ATKKDMSPQKFWGLTRS 423
Score = 123 (48.4 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 38/119 (31%), Positives = 59/119 (49%)
Query: 51 NQLTFDTCLASLHTYLG-DVEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPLRVIK 109
N + FDT L + HTYLG D+E+ H R + + +P+ ++L P TLPL++
Sbjct: 48 NIINFDTSLPTSHTYLGADMEEFHGRTLH-DDDSCQVIPVLPEVLMILIPGQTLPLQLSH 106
Query: 110 PNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITFATIGTTAEIRQYRRLEDGSLNVV 168
P ++ R L Q D + + +E + A GTTAEI YR ++ + VV
Sbjct: 107 PQEVSMV-RNLIQKDRTFAVLAYSNVQERE------AQFGTTAEIYAYREEQEFGIEVV 158
Score = 54 (24.1 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 289 SDIQSRRPHLNDSDSIGNWKQSENVGLRIGKSSALGRQ 326
S++Q R + I +++ + G+ + K A+GRQ
Sbjct: 129 SNVQEREAQFGTTAEIYAYREEQEFGIEVVKVKAIGRQ 166
>RGD|1310533 [details] [associations]
symbol:Crbn "cereblon" species:10116 "Rattus norvegicus"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO;ISS;IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;ISO;ISS] [GO:0031464 "Cul4A-RING ubiquitin ligase
complex" evidence=ISO;ISS] [GO:0032463 "negative regulation of
protein homooligomerization" evidence=IDA] [GO:0034766 "negative
regulation of ion transmembrane transport" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;ISS] [GO:0090073 "positive regulation of
protein homodimerization activity" evidence=IDA] InterPro:IPR003111
Pfam:PF02190 SMART:SM00464 UniPathway:UPA00143 RGD:1310533
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0016020
GO:GO:0016567 InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0032463
GO:GO:0004176 CTD:51185 eggNOG:NOG313031
GeneTree:ENSGT00390000016404 HOGENOM:HOG000067866
HOVERGEN:HBG054571 KO:K11793 OMA:IRTQSDG OrthoDB:EOG44XJGR
GO:GO:0031464 GO:GO:0034766 GO:GO:0090073 EMBL:AY973953
EMBL:BC099779 EMBL:BC127455 IPI:IPI00364564 RefSeq:NP_001015003.1
UniGene:Rn.195259 STRING:Q56AP7 PRIDE:Q56AP7
Ensembl:ENSRNOT00000008873 GeneID:297498 KEGG:rno:297498
UCSC:RGD:1310533 InParanoid:Q56AP7 NextBio:642328
Genevestigator:Q56AP7 GermOnline:ENSRNOG00000006534 Uniprot:Q56AP7
Length = 445
Score = 399 (145.5 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 76/197 (38%), Positives = 115/197 (58%)
Query: 337 WRN-ELSQFRRTSRAFLPHWVYRMYDSYCLAQRAADKWKQIVGTPNMDGLVKKPDLLSFY 395
W+ + +F + P W+Y +YD+ L R + ++ D L P S+
Sbjct: 227 WQKYQKRKFHCANLTSWPRWLYSLYDAETLMDRIKKQLREWDENLKEDSLPANPIDFSYR 286
Query: 396 IASKIPVSESTRQELLEIDGVSYRLRREIELLESFDLVRCKTCK-TAIAKRSDMLVMSSE 454
+A+ +P+ + R +LL+I RLR E++++ + CK C+ T I ++++ +S
Sbjct: 287 VAACLPIDDVLRIQLLKIGSAIQRLRCELDIMNKCTSLCCKQCQETEITTKNEIFSLSLC 346
Query: 455 GPLGAYVNPHGCVHEILTLNKANGLALYGPAETEYSWFPGYAWTVASCSICETHMGWLFT 514
GP+ AYVNPHG VHE LT+ KA+ L L G T +SWFPGYAWT+A C IC +H+GW FT
Sbjct: 347 GPMAAYVNPHGYVHETLTVYKASNLNLIGRPSTVHSWFPGYAWTIAQCKICASHIGWKFT 406
Query: 515 ATKKKLKPKSFWGIRSS 531
ATKK + P+ FWG+ S
Sbjct: 407 ATKKDMSPQKFWGLTRS 423
Score = 124 (48.7 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 38/119 (31%), Positives = 59/119 (49%)
Query: 51 NQLTFDTCLASLHTYLG-DVEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPLRVIK 109
N + FDT L + HTYLG D+E+ H R + + +P+ ++L P TLPL++
Sbjct: 48 NIINFDTSLPTSHTYLGADMEEFHGRTLH-DDDSCQVIPVLPEVMMILIPGQTLPLQLSH 106
Query: 110 PNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITFATIGTTAEIRQYRRLEDGSLNVV 168
P ++ R L Q D + + +E + A GTTAEI YR ++ + VV
Sbjct: 107 PQEVSMV-RNLIQKDRTFAVLAYSNVQERE------AQFGTTAEIYAYREEQEFGIEVV 158
Score = 54 (24.1 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 289 SDIQSRRPHLNDSDSIGNWKQSENVGLRIGKSSALGRQ 326
S++Q R + I +++ + G+ + K A+GRQ
Sbjct: 129 SNVQEREAQFGTTAEIYAYREEQEFGIEVVKVKAIGRQ 166
>UNIPROTKB|P0CF65 [details] [associations]
symbol:CRBN "Protein cereblon" species:9031 "Gallus gallus"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA;ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0031464 "Cul4A-RING ubiquitin ligase
complex" evidence=ISS] InterPro:IPR003111 Pfam:PF02190
SMART:SM00464 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0016567 InterPro:IPR015947 SUPFAM:SSF88697
GO:GO:0004176 HOGENOM:HOG000067866 GO:GO:0031464 EMBL:DR425223
IPI:IPI00585552 ProteinModelPortal:P0CF65 NextBio:20819613
Uniprot:P0CF65
Length = 445
Score = 399 (145.5 bits), Expect = 2.3e-48, Sum P(2) = 2.3e-48
Identities = 77/197 (39%), Positives = 115/197 (58%)
Query: 337 WRN-ELSQFRRTSRAFLPHWVYRMYDSYCLAQRAADKWKQIVGTPNMDGLVKKPDLLSFY 395
W+ + +F S P W+Y +YD+ L +R + + + L P S+
Sbjct: 226 WQKYQKRKFHCASLTSWPPWLYSLYDAETLMERVKRQLHEWDENLKDESLPTNPIDFSYR 285
Query: 396 IASKIPVSESTRQELLEIDGVSYRLRREIELLESFDLVRCKTCK-TAIAKRSDMLVMSSE 454
+A+ +P+ ++ R +LL+I RLR E++++ + CK C+ T I ++++ +S
Sbjct: 286 VAACLPIDDALRIQLLKIGSAIQRLRCELDIMNKCTSLCCKQCQDTEITTKNEIFSLSLC 345
Query: 455 GPLGAYVNPHGCVHEILTLNKANGLALYGPAETEYSWFPGYAWTVASCSICETHMGWLFT 514
GP+ AYVNPHG +HE LT+ KA L L G TE+SWFPGYAWT+A C IC HMGW FT
Sbjct: 346 GPMAAYVNPHGYIHETLTVYKACNLNLSGRPSTEHSWFPGYAWTIAQCRICGNHMGWKFT 405
Query: 515 ATKKKLKPKSFWGIRSS 531
ATKK + P+ FWG+ S
Sbjct: 406 ATKKDMSPQKFWGLTRS 422
Score = 123 (48.4 bits), Expect = 2.3e-48, Sum P(2) = 2.3e-48
Identities = 38/119 (31%), Positives = 57/119 (47%)
Query: 51 NQLTFDTCLASLHTYLG-DVEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPLRVIK 109
N + FDT L + H YLG D+E+ H R + + +P+ V+L P TLPL++
Sbjct: 46 NMINFDTSLPTSHMYLGSDMEEFHGRTLH-DDDSCQVIPVLPHVMVMLIPGQTLPLQLFH 104
Query: 110 PNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITFATIGTTAEIRQYRRLEDGSLNVV 168
P ++ R L Q D + + RE + A GTTAEI YR ++ + V
Sbjct: 105 PQEVSMV-RNLIQKDRTFAVLAYSNVRERE------AHFGTTAEIYAYREEQEYGIETV 156
Score = 54 (24.1 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 289 SDIQSRRPHLNDSDSIGNWKQSENVGLRIGKSSALGRQ 326
S+++ R H + I +++ + G+ K A+GRQ
Sbjct: 127 SNVREREAHFGTTAEIYAYREEQEYGIETVKVKAIGRQ 164
>UNIPROTKB|F1P3S5 [details] [associations]
symbol:CRBN "Protein cereblon" species:9031 "Gallus gallus"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR003111 Pfam:PF02190
SMART:SM00464 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0004176
GeneTree:ENSGT00390000016404 OMA:IRTQSDG GO:GO:0031464
IPI:IPI00585552 EMBL:AADN02014471 Ensembl:ENSGALT00000013466
Uniprot:F1P3S5
Length = 425
Score = 389 (142.0 bits), Expect = 2.6e-47, Sum P(2) = 2.6e-47
Identities = 77/199 (38%), Positives = 115/199 (57%)
Query: 337 WRN-ELSQFRRTSRAFLPHWVYRMYDSY--CLAQRAADKWKQIVGTPNMDGLVKKPDLLS 393
W+ + +F S P W+Y +YD+ L +R + + + L P S
Sbjct: 204 WQKYQKRKFHCASLTSWPPWLYSLYDAQKETLMERVKRQLHEWDENLKDESLPTNPIDFS 263
Query: 394 FYIASKIPVSESTRQELLEIDGVSYRLRREIELLESFDLVRCKTCK-TAIAKRSDMLVMS 452
+ +A+ +P+ ++ R +LL+I RLR E++++ + CK C+ T I ++++ +S
Sbjct: 264 YRVAACLPIDDALRIQLLKIGSAIQRLRCELDIMNKCTSLCCKQCQDTEITTKNEIFSLS 323
Query: 453 SEGPLGAYVNPHGCVHEILTLNKANGLALYGPAETEYSWFPGYAWTVASCSICETHMGWL 512
GP+ AYVNPHG +HE LT+ KA L L G TE+SWFPGYAWT+A C IC HMGW
Sbjct: 324 LCGPMAAYVNPHGYIHETLTVYKACNLNLSGRPSTEHSWFPGYAWTIAQCRICGNHMGWK 383
Query: 513 FTATKKKLKPKSFWGIRSS 531
FTATKK + P+ FWG+ S
Sbjct: 384 FTATKKDMSPQKFWGLTRS 402
Score = 123 (48.4 bits), Expect = 2.6e-47, Sum P(2) = 2.6e-47
Identities = 38/119 (31%), Positives = 57/119 (47%)
Query: 51 NQLTFDTCLASLHTYLG-DVEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPLRVIK 109
N + FDT L + H YLG D+E+ H R + + +P+ V+L P TLPL++
Sbjct: 24 NMINFDTSLPTSHMYLGSDMEEFHGRTLH-DDDSCQVIPVLPHVMVMLIPGQTLPLQLFH 82
Query: 110 PNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITFATIGTTAEIRQYRRLEDGSLNVV 168
P ++ R L Q D + + RE + A GTTAEI YR ++ + V
Sbjct: 83 PQEVSMV-RNLIQKDRTFAVLAYSNVRERE------AHFGTTAEIYAYREEQEYGIETV 134
Score = 54 (24.1 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 289 SDIQSRRPHLNDSDSIGNWKQSENVGLRIGKSSALGRQ 326
S+++ R H + I +++ + G+ K A+GRQ
Sbjct: 105 SNVREREAHFGTTAEIYAYREEQEYGIETVKVKAIGRQ 142
>UNIPROTKB|Q640S2 [details] [associations]
symbol:crbn "Protein cereblon" species:8364 "Xenopus
(Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003111 Pfam:PF02190 SMART:SM00464 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0016567
InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0004176 CTD:51185
eggNOG:NOG313031 GeneTree:ENSGT00390000016404 HOGENOM:HOG000067866
HOVERGEN:HBG054571 KO:K11793 OrthoDB:EOG44XJGR GO:GO:0031464
EMBL:BC082517 RefSeq:NP_001008192.1 UniGene:Str.19548
ProteinModelPortal:Q640S2 STRING:Q640S2 Ensembl:ENSXETT00000011183
GeneID:493554 KEGG:xtr:493554 Xenbase:XB-GENE-973907
InParanoid:Q640S2 OMA:MAFIRIN Bgee:Q640S2 Uniprot:Q640S2
Length = 447
Score = 394 (143.8 bits), Expect = 5.3e-47, Sum P(2) = 5.3e-47
Identities = 80/208 (38%), Positives = 118/208 (56%)
Query: 327 SHRGEGSKMCWRNELSQ--FRRTSRAFLPHWVYRMYDSYCLAQRAADKWKQIVGTPNMDG 384
S R SK W ++ + F S P W+Y +YD+ L +R + + D
Sbjct: 216 SGRSPQSKCQWLHKYRRRKFLGASLTSWPSWLYALYDADSLMERVKLQLHEWDENLRDDS 275
Query: 385 LVKKPDLLSFYIASKIPVSESTRQELLEIDGVSYRLRREIELLESFDLVRCKTCK-TAIA 443
L P S+ +A+ +P+ ++ R +LL+I RLR E++++ + CK C T I
Sbjct: 276 LPANPIDFSYRVAACLPIDDALRIQLLQIGNAIQRLRCELDIMSKCTSLCCKHCPDTEIT 335
Query: 444 KRSDMLVMSSEGPLGAYVNPHGCVHEILTLNKANGLALYGPAETEYSWFPGYAWTVASCS 503
++++ +S GP+ AYVNPHG VHE LT+ KA L+L G TE SWFPG+AWT+A C
Sbjct: 336 TKNEIFSLSLCGPMAAYVNPHGYVHETLTVYKAFNLSLVGRPSTENSWFPGFAWTIAQCR 395
Query: 504 ICETHMGWLFTATKKKLKPKSFWGIRSS 531
+C +HMGW FTA +K L P+ FWG+ S
Sbjct: 396 VCGSHMGWKFTAVRKDLSPQKFWGLTRS 423
Score = 115 (45.5 bits), Expect = 5.3e-47, Sum P(2) = 5.3e-47
Identities = 39/119 (32%), Positives = 56/119 (47%)
Query: 51 NQLTFDTCLASLHTYLG-DVEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPLRVIK 109
N + FDT L + H YLG D+E+ H R + + +P+ V+L P TLPL + +
Sbjct: 46 NIINFDTSLPTSHAYLGVDMEEFHGRTLH-DDDSCQQIPVLPHVQVMLIPGQTLPLHLSR 104
Query: 110 PNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITFATIGTTAEIRQYRRLEDGSLNVV 168
P ++ R L Q D T V+ +G A GTTAEI YR + + V
Sbjct: 105 PQEVSMV-RGLIQRD--RTFAVLAY----SDGLQREAHFGTTAEIYAYREEHEFGIETV 156
Score = 47 (21.6 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 289 SDIQSRRPHLNDSDSIGNWKQSENVGLRIGKSSALGRQ 326
SD R H + I +++ G+ K A+GRQ
Sbjct: 127 SDGLQREAHFGTTAEIYAYREEHEFGIETVKVKAIGRQ 164
>UNIPROTKB|F1SFL6 [details] [associations]
symbol:CRBN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] InterPro:IPR003111 Pfam:PF02190
SMART:SM00464 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0004176
GeneTree:ENSGT00390000016404 OMA:IRTQSDG GO:GO:0031464
EMBL:CU914461 Ensembl:ENSSSCT00000012620 Uniprot:F1SFL6
Length = 387
Score = 261 (96.9 bits), Expect = 1.4e-30, Sum P(2) = 1.4e-30
Identities = 55/160 (34%), Positives = 88/160 (55%)
Query: 337 WRN-ELSQFRRTSRAFLPHWVYRMYDSYCLAQRAADKWKQIVGTPNMDGLVKKPDLLSFY 395
W+ + +F + P W+Y +YD+ L R + ++ D L P S+
Sbjct: 228 WQKYQKRKFHCANLTSWPRWLYSLYDAETLMDRIKKQLREWDENLKEDSLPSNPIDFSYR 287
Query: 396 IASKIPVSESTRQELLEIDGVSYRLRREIELLESFDLVRCKTCK-TAIAKRSDMLVMSSE 454
+A+ +P+ + R +LL+I RLR E++++ + CK C+ T I ++++ +S
Sbjct: 288 VAACLPIDDVLRIQLLKIGSAIQRLRCELDIMNKCTSLCCKQCQETEITTKNEIFSLSLC 347
Query: 455 GPLGAYVNPHGCVHEILTLNKANGLALYGPAETEYSWFPG 494
GP+ AYVNPHG VHE LT+ KA+ L L G TE+SWFPG
Sbjct: 348 GPMAAYVNPHGYVHETLTVYKASNLNLIGRPSTEHSWFPG 387
Score = 131 (51.2 bits), Expect = 1.4e-30, Sum P(2) = 1.4e-30
Identities = 38/119 (31%), Positives = 59/119 (49%)
Query: 51 NQLTFDTCLASLHTYLG-DVEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPLRVIK 109
N + FDT L + HTYLG D+E+ H R + + +P+ ++L P TLPL++
Sbjct: 49 NIINFDTSLPTSHTYLGSDMEEFHGRTLH-DDDSCQVIPVLPQVMMILIPGQTLPLQLFS 107
Query: 110 PNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITFATIGTTAEIRQYRRLEDGSLNVV 168
P ++ R L Q D + + +E + A GTTAEI YR +D + +V
Sbjct: 108 PQEVSMV-RNLIQKDRTFAVLAYSNVQERE------AQFGTTAEIYAYREEQDFGIEIV 159
Score = 56 (24.8 bits), Expect = 9.6e-23, Sum P(2) = 9.6e-23
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 289 SDIQSRRPHLNDSDSIGNWKQSENVGLRIGKSSALGRQ 326
S++Q R + I +++ ++ G+ I K A+GRQ
Sbjct: 130 SNVQEREAQFGTTAEIYAYREEQDFGIEIVKVKAIGRQ 167
>UNIPROTKB|J3QT87 [details] [associations]
symbol:CRBN "Protein cereblon" species:9606 "Homo sapiens"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] InterPro:IPR003111
Pfam:PF02190 SMART:SM00464 GO:GO:0006508 InterPro:IPR015947
SUPFAM:SSF88697 GO:GO:0004176 EMBL:AC024060 HGNC:HGNC:30185
ProteinModelPortal:J3QT87 Ensembl:ENST00000424814 Uniprot:J3QT87
Length = 394
Score = 152 (58.6 bits), Expect = 6.1e-17, Sum P(2) = 6.1e-17
Identities = 32/78 (41%), Positives = 43/78 (55%)
Query: 457 LGAYVNPHGCVHEILTLNKANGLALYGPAETEYSW---FPGYAWTVASCSICETHMGWLF 513
+G+ + C E+ +NK L ETE + YAWTVA C IC +H+GW F
Sbjct: 297 IGSAIQRLRC--ELDIMNKCTSLCCKQCQETEITTKNEIFRYAWTVAQCKICASHIGWKF 354
Query: 514 TATKKKLKPKSFWGIRSS 531
TATKK + P+ FWG+ S
Sbjct: 355 TATKKDMSPQKFWGLTRS 372
Score = 130 (50.8 bits), Expect = 6.1e-17, Sum P(2) = 6.1e-17
Identities = 38/119 (31%), Positives = 59/119 (49%)
Query: 51 NQLTFDTCLASLHTYLG-DVEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPLRVIK 109
N + FDT L + HTYLG D+E+ H R + + +P+ ++L P TLPL++
Sbjct: 41 NIINFDTSLPTSHTYLGADMEEFHGRTLH-DDDSCQVIPVLPQVMMILIPGQTLPLQLFH 99
Query: 110 PNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITFATIGTTAEIRQYRRLEDGSLNVV 168
P ++ R L Q D + + +E + A GTTAEI YR +D + +V
Sbjct: 100 PQEVSMV-RNLIQKDRTFAVLAYSNVQERE------AQFGTTAEIYAYREEQDFGIEIV 151
Score = 120 (47.3 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 30/124 (24%), Positives = 59/124 (47%)
Query: 327 SHRGEGSKMCWRN-ELSQFRRTSRAFLPHWVYRMYDSYCLAQRAADKWKQIVGTPNMDGL 385
S + S W+ + +F + P W+Y +YD+ L R + ++ D L
Sbjct: 210 SREDQCSYKWWQKYQKRKFHCANLTSWPRWLYSLYDAETLMDRIKKQLREWDENLKDDSL 269
Query: 386 VKKPDLLSFYIASKIPVSESTRQELLEIDGVSYRLRREIELLESFDLVRCKTCK-TAIAK 444
P S+ +A+ +P+ + R +LL+I RLR E++++ + CK C+ T I
Sbjct: 270 PSNPIDFSYRVAACLPIDDVLRIQLLKIGSAIQRLRCELDIMNKCTSLCCKQCQETEITT 329
Query: 445 RSDM 448
++++
Sbjct: 330 KNEI 333
Score = 56 (24.8 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 289 SDIQSRRPHLNDSDSIGNWKQSENVGLRIGKSSALGRQ 326
S++Q R + I +++ ++ G+ I K A+GRQ
Sbjct: 122 SNVQEREAQFGTTAEIYAYREEQDFGIEIVKVKAIGRQ 159
>WB|WBGene00010891 [details] [associations]
symbol:M18.6 species:6239 "Caenorhabditis elegans"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] InterPro:IPR003111
Pfam:PF02190 GO:GO:0006508 GO:GO:0004176 eggNOG:NOG313031
GeneTree:ENSGT00390000016404 KO:K11793 EMBL:Z68507 PIR:T23796
RefSeq:NP_502300.2 UniGene:Cel.12564 ProteinModelPortal:Q21558
STRING:Q21558 EnsemblMetazoa:M18.6 GeneID:187461
KEGG:cel:CELE_M18.6 UCSC:M18.6 CTD:187461 WormBase:M18.6
HOGENOM:HOG000017897 InParanoid:Q21558 OMA:WLARNIP NextBio:935354
Uniprot:Q21558
Length = 414
Score = 187 (70.9 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 39/137 (28%), Positives = 70/137 (51%)
Query: 393 SFYIASKIPVSESTRQELLEIDGVSYRLRREIELLESFDLVRCKTCKTAIAKRSDMLVMS 452
S++ A I + T LL+ D + R+ ++ + F + RC C+ I + ++ +
Sbjct: 237 SYFAAKHIFSNRLTEYSLLKEDSANGRIVAALKYFKVF-VGRCSRCRIPIFRNEHIMRLP 295
Query: 453 SEGPLGAYVNPHGCVHEILTLNKANGLALYGPAETEYSWFPGYAWTVASCSICETHMGWL 512
+ +VN HG VH+I L++ P E++WFP YAW + CS C H+GW
Sbjct: 296 DQTM--THVNAHGFVHKITLLSEIRNYDRATPPSYEFTWFPEYAWIIIQCSRCHEHLGWE 353
Query: 513 FTATKKKLKPKSFWGIR 529
+ + ++ P+ F+GI+
Sbjct: 354 YISMTRE--PRRFFGIQ 368
>UNIPROTKB|J3QT51 [details] [associations]
symbol:CRBN "Protein cereblon" species:9606 "Homo sapiens"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] InterPro:IPR003111
Pfam:PF02190 GO:GO:0006508 InterPro:IPR015947 SUPFAM:SSF88697
GO:GO:0004176 EMBL:AC024060 HGNC:HGNC:30185
ProteinModelPortal:J3QT51 Ensembl:ENST00000450014 Uniprot:J3QT51
Length = 228
Score = 130 (50.8 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 38/119 (31%), Positives = 59/119 (49%)
Query: 51 NQLTFDTCLASLHTYLG-DVEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPLRVIK 109
N + FDT L + HTYLG D+E+ H R + + +P+ ++L P TLPL++
Sbjct: 41 NIINFDTSLPTSHTYLGADMEEFHGRTLH-DDDSCQVIPVLPQVMMILIPGQTLPLQLFH 99
Query: 110 PNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITFATIGTTAEIRQYRRLEDGSLNVV 168
P ++ R L Q D + + +E + A GTTAEI YR +D + +V
Sbjct: 100 PQEVSMV-RNLIQKDRTFAVLAYSNVQERE------AQFGTTAEIYAYREEQDFGIEIV 151
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 538 477 0.00079 119 3 11 22 0.39 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 620 (66 KB)
Total size of DFA: 300 KB (2155 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 36.39u 0.10s 36.49t Elapsed: 00:00:01
Total cpu time: 36.39u 0.10s 36.49t Elapsed: 00:00:01
Start: Mon May 20 19:12:55 2013 End: Mon May 20 19:12:56 2013