Query 009304
Match_columns 538
No_of_seqs 304 out of 2096
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 23:28:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009304.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009304hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3js8_A Cholesterol oxidase; ch 100.0 1.4E-67 4.9E-72 568.2 36.9 443 1-482 21-539 (540)
2 2i0k_A Oxidoreductase; MIX alp 100.0 5.8E-66 2E-70 566.3 34.0 449 1-483 27-561 (561)
3 4feh_A Oxidoreductase DPRE1; a 100.0 1.8E-63 6.1E-68 536.0 38.0 428 1-481 35-478 (481)
4 2vfr_A Xylitol oxidase, aldito 100.0 1.4E-60 5E-65 507.9 39.9 405 1-484 12-422 (422)
5 2bvf_A 6-hydroxy-D-nicotine ox 100.0 9.2E-38 3.2E-42 335.6 29.5 400 1-477 30-452 (459)
6 4bby_A Alkyldihydroxyacetoneph 100.0 5.8E-37 2E-41 342.3 29.3 202 2-211 198-411 (658)
7 3pm9_A Putative oxidoreductase 100.0 1.8E-33 6.2E-38 302.4 27.7 201 1-210 43-253 (476)
8 3tsh_A Pollen allergen PHL P 4 100.0 3.9E-32 1.3E-36 294.8 33.8 181 2-191 45-230 (500)
9 3rja_A Carbohydrate oxidase; p 100.0 1.1E-30 3.9E-35 280.8 37.1 184 1-193 28-214 (473)
10 3fw9_A Reticuline oxidase; BI- 100.0 2.5E-31 8.7E-36 286.6 31.6 181 2-192 38-222 (495)
11 2exr_A Cytokinin dehydrogenase 100.0 2.4E-31 8.1E-36 289.6 31.6 200 1-211 53-265 (524)
12 1w1o_A Cytokinin dehydrogenase 100.0 8.6E-31 3E-35 286.3 34.9 198 1-208 60-269 (534)
13 2uuu_A Alkyldihydroxyacetoneph 100.0 4.5E-31 1.5E-35 290.1 32.6 199 4-210 132-340 (584)
14 2y3s_A TAML; oxidoreductase; H 100.0 2.4E-30 8.2E-35 281.8 34.9 172 1-183 50-232 (530)
15 3vte_A Tetrahydrocannabinolic 100.0 6.7E-30 2.3E-34 276.3 32.5 181 2-192 46-230 (518)
16 3pop_A GILR oxidase; FAD bindi 100.0 6.5E-30 2.2E-34 276.2 29.3 172 1-183 26-208 (501)
17 2ipi_A Aclacinomycin oxidoredu 100.0 3.5E-29 1.2E-33 272.4 33.4 172 1-183 47-229 (521)
18 1zr6_A Glucooligosaccharide ox 100.0 7.7E-29 2.6E-33 268.7 35.6 179 1-190 34-215 (503)
19 2wdx_A Putative hexose oxidase 100.0 3.2E-29 1.1E-33 272.7 32.6 177 1-188 49-247 (523)
20 1e8g_A Vanillyl-alcohol oxidas 100.0 2.3E-27 7.8E-32 260.4 36.3 175 6-190 67-276 (560)
21 1wvf_A 4-cresol dehydrogenase 99.9 3.9E-26 1.3E-30 248.8 25.3 188 6-203 53-259 (520)
22 1f0x_A DLDH, D-lactate dehydro 99.9 1.1E-26 3.6E-31 253.9 14.9 197 2-209 39-297 (571)
23 1hsk_A UDP-N-acetylenolpyruvoy 99.9 2E-22 6.8E-27 206.5 15.3 161 5-186 44-209 (326)
24 3tx1_A UDP-N-acetylenolpyruvoy 99.9 2.1E-21 7.1E-26 198.0 14.9 165 5-188 50-217 (322)
25 1uxy_A MURB, uridine diphospho 99.8 5.7E-20 1.9E-24 188.7 17.1 166 5-188 10-183 (340)
26 3i99_A UDP-N-acetylenolpyruvoy 99.8 5.2E-20 1.8E-24 189.7 12.8 165 5-189 26-200 (357)
27 2yvs_A Glycolate oxidase subun 99.8 2.3E-18 7.8E-23 166.2 12.4 115 69-194 1-122 (219)
28 2gqt_A UDP-N-acetylenolpyruvyl 99.7 6.6E-18 2.3E-22 167.6 11.3 153 5-187 18-173 (268)
29 1ffv_C CUTM, flavoprotein of c 98.2 2.6E-06 9E-11 85.2 9.2 156 9-186 4-177 (287)
30 1n62_C Carbon monoxide dehydro 97.7 0.00012 4E-09 73.2 9.9 155 9-186 4-177 (288)
31 2w3s_A Xanthine dehydrogenase; 97.3 0.00014 4.8E-09 77.3 5.3 151 11-186 178-346 (462)
32 3nvz_B Xanthine dehydrogenase/ 97.3 0.0012 4.2E-08 66.3 10.9 163 8-185 8-190 (305)
33 1t3q_C Quinoline 2-oxidoreduct 97.2 0.00053 1.8E-08 68.4 6.9 149 9-185 4-175 (288)
34 3hrd_C Nicotinate dehydrogenas 96.4 0.0037 1.3E-07 62.5 5.9 108 10-121 3-121 (296)
35 1rm6_B 4-hydroxybenzoyl-COA re 94.6 0.027 9.4E-07 56.8 4.9 98 10-117 6-118 (324)
36 3unc_A Xanthine dehydrogenase/ 93.7 0.12 4.1E-06 61.6 8.6 129 10-146 233-380 (1332)
37 1f0x_A DLDH, D-lactate dehydro 89.1 0.64 2.2E-05 50.5 7.3 102 342-476 455-557 (571)
38 1wvf_A 4-cresol dehydrogenase 88.1 1.3 4.4E-05 47.5 8.9 110 345-476 394-510 (520)
39 3zyv_A AOH1; oxidoreductase, m 87.8 1.6 5.3E-05 52.3 10.1 103 12-120 242-364 (1335)
40 3q8j_A Asteropsin A, ABU8-1; c 80.6 0.75 2.6E-05 29.0 1.6 29 493-521 1-29 (37)
41 2gvs_A Chemosensory protein CS 65.3 3.4 0.00012 34.5 2.5 30 450-481 75-104 (109)
42 1k19_A Chemosensory protein CS 62.1 3.4 0.00011 34.7 1.9 30 450-481 73-102 (112)
43 1cix_A Protein (tachystatin A) 49.6 12 0.00041 24.9 2.5 29 494-524 3-39 (44)
44 1rzw_A Protein AF2095(GR4); be 39.3 61 0.0021 27.4 6.2 39 7-45 46-84 (123)
45 1xty_A PTH, peptidyl-tRNA hydr 33.3 62 0.0021 27.1 5.3 39 7-45 52-90 (120)
46 1wn2_A Peptidyl-tRNA hydrolase 32.2 69 0.0024 26.9 5.4 39 7-45 53-91 (121)
47 1rlk_A Hypothetical protein TA 29.8 71 0.0024 26.6 5.1 39 7-45 49-87 (117)
48 2zv3_A PTH, peptidyl-tRNA hydr 26.1 70 0.0024 26.6 4.4 39 7-45 47-85 (115)
49 4a4j_A Pacszia, cation-transpo 25.8 98 0.0034 21.7 4.8 31 69-99 33-65 (69)
50 2dcv_A Tachystatin-B1; antimic 23.5 43 0.0015 22.5 1.9 23 494-518 3-26 (42)
51 2r2z_A Hemolysin; APC85144, en 22.0 93 0.0032 24.4 4.2 39 75-119 15-53 (93)
52 1q7s_A BIT1, protein CGI-147; 21.4 1.1E+02 0.0039 25.3 4.8 38 8-45 50-87 (117)
No 1
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=100.00 E-value=1.4e-67 Score=568.22 Aligned_cols=443 Identities=19% Similarity=0.265 Sum_probs=341.3
Q ss_pred CCCCCCCCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCCCccCC---CCcEEEEcC-CCCCeeEEeCC--
Q 009304 1 MFPDRSACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKLVCPDG---QDGLLISTK-YLNKIINIDTE-- 74 (538)
Q Consensus 1 ~W~~~~~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~~~~~~---~~gv~Idl~-~ln~v~~vd~~-- 74 (538)
||++++.+.|..+++|+|++||+++|+.|++++++|+++ |+|||+++++++++ .+|++|||+ +||+| ++|++
T Consensus 21 nWs~~~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~-GgGhs~~~l~~~gG~~~~~GVvIdls~~Ln~I-~vD~~~~ 98 (540)
T 3js8_A 21 NWAGDIKVDDVWTCAPRSADEVVKVANWAKDNGYKVRAR-GMMHNWSPLTLAAGVSCPAVVLLDTTRYLTAM-SIDASGP 98 (540)
T ss_dssp CTTSCCEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEE-CSCCCSSCSSCCTTCSSCSEEEEETTTTCCCE-EEECSSS
T ss_pred ccccccCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEE-eCCCCcccccccCCCCCCCeEEEECcCcCCCE-EECCCCC
Confidence 799999999999999999999999999999999999999 99999987776543 368999995 69997 99985
Q ss_pred CCEEEEeCCCCHHHHHHHHHHCCCcccccccccccchhhhhccCCcCCCcc---------CCCCchhcceeEEEEEeeCC
Q 009304 75 AMTITMESGVTLRQIIGESAKAGLALPYTPYWWGLTIGGLIGTGAHGSSLW---------GRGSSIHDYVVELRIVSSGG 145 (538)
Q Consensus 75 ~~~vtv~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~tvGG~i~tg~hGs~~~---------~~~G~~~d~V~~l~vV~~~G 145 (538)
.++|+||||+++.+|.++|.++||++++.++++.+||||+++||+||++.. .++|.++|+|++++||+++|
T Consensus 99 ~~tVtV~AGv~l~~L~~~L~~~GL~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~~~D~V~~levV~adG 178 (540)
T 3js8_A 99 VAKVTAQAGITMEALLTGLEKAGLGVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYGSISNLVLSLTAVVYDK 178 (540)
T ss_dssp SEEEEEETTSBHHHHHHHHHHTTEECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSCGGGGEEEEEEEEEET
T ss_pred ccEEEEccCCCHHHHHHHHHHcCCEEEecCCCCCeEEcccccCCCCcccccccccccccccccccHHHhEEEEEEEcCCC
Confidence 689999999999999999999999999999988899999999999999641 25899999999999999999
Q ss_pred CCCCcccEEEcCCCccchhhhhcCCCCeEEEEEEEEEeEecCceeEEEE-ecCchhHHH-------HHhhhccccceeEE
Q 009304 146 PDDGYAKVRVLNENDQDLDAAKVSLGVLGVISQVTLKLQPLFKRSITFL-MKNDSELGD-------EAGSFGHQHEFADI 217 (538)
Q Consensus 146 ~~~g~~~v~~~~~~~~~f~a~~~s~G~lGVIt~vtl~l~p~~~~~~~~~-~~~~~~~~~-------~~~~~~~~~~~~~~ 217 (538)
+...+. ++++++++++|+++++|+|. ||||++|||++|.+++..+.. ..+.+++.+ .+.+++++++|+++
T Consensus 179 ~~~~~~-i~~~s~~~~DL~a~r~G~G~-gIVTevtlrl~P~~~l~~~~~~~~~~~e~l~~~~~~~~~~~~~~~~~~~~e~ 256 (540)
T 3js8_A 179 ASGAYA-LRKFARNDPQIAPLLAHVGR-SLIVEATLQAAPNQRLRCQSWFNIPYGEMFAAAGSGGRTFASYLDSAGRVEA 256 (540)
T ss_dssp TTTEEE-EEEEETTSGGGHHHHTCTTS-SCEEEEEEEEEECCEEEEEEECCSCHHHHTCCSSCCSSCHHHHHHHTSEEEE
T ss_pred CCceee-EEEeCCCChhHHHHHhcCCC-eEEEEEEEEEEECCceEEEEEecCCHHHHHhhcccccccHHHHHhccCeEEE
Confidence 621111 66677677888888888898 599999999999999876654 468888776 78999999999999
Q ss_pred EEeeCCCcEEEEecCCCCCCCCCCc-cccccccccchhhhhhhhccchhhhhhcccccccccccchhhhhhhhhcccccc
Q 009304 218 VWYPSQHKALYRIDDRISSNATGNA-VYNYIPFRSTLSATLATIRTTEENQESRSDANGKCIGAKLVTSTLVTSAFGLTN 296 (538)
Q Consensus 218 ~w~P~~~~~~~~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 296 (538)
+|||++++++++.+++.+...++.. +.. +++...+.. ....+.+.+..... ...+.+...+....+++..
T Consensus 257 ~WfP~t~~~~~k~~~~~~~~p~~~~~~~~--p~~~~~~d~--l~~~~~~~~~~~~~-----~~~p~~~p~~~~~~~~~~~ 327 (540)
T 3js8_A 257 IWFPFTSNPWLKVWTVTPNKPLFSRQTDK--PFNYPFSDN--LPDEVTDLANKILS-----LGDGKLTPAFGKAQFAAAS 327 (540)
T ss_dssp EECTTCSSCEEEEEEECSSCCTTCEECSS--SCCCHHHHS--CCHHHHHHHHHHHT-----SCCGGGHHHHHHHHHHHHH
T ss_pred EEECCCCceEEEEccCCCCCCCccccccC--Ccccccccc--cchHHHHHHHHHhh-----cCCcccchhHHhHHHHhhh
Confidence 9999999999888877665433321 111 000000000 00011111111000 0001112222222222222
Q ss_pred CCcccc-Cccccccc--ccccccccccCCCCcccccccccCCCCCCccEEEEEEEE--eccchHHHHHHHHHHHHhC---
Q 009304 297 NGIAFT-GYPVIGHH--NRLQSSGTCLDSPQDSLITACAWDPRIKGEFFHQTTFSI--RLSVVKSFIDDIQKLIKLE--- 368 (538)
Q Consensus 297 ~~~~~t-~~pvvg~~--~~~~~~~~~~~~~~~~~~~~~~w~~r~~~~~~~~~E~~v--P~~~~~~~i~dv~~l~~~~--- 368 (538)
.+...+ ...++|++ ++++.+ .+..+|.++||+| |+++++++|++++++++..
T Consensus 328 ~~~~~~~~~d~~g~s~~~~~~~~--------------------~~~~r~~~~eyav~~p~~~~~~~~~~~~~~~~~~~~~ 387 (540)
T 3js8_A 328 AGLVATASWDLWGWSKNLLLYVK--------------------PTTLRVTANGYAVLTRRENVQRVLNEFVTFYQARVQA 387 (540)
T ss_dssp HHHHHTTCSEEEEEHHHHHCCCC--------------------TTSCCCEEBCEEEEECGGGHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccceEEEec--------------------CccceeEeeEEeecCcHHHHHHHHHHHHHHHHhhhhh
Confidence 222222 23578888 776642 2236789999999 9999999999999988720
Q ss_pred cccccCceeecceEEEEecCCCCC-----------CCC--CCC-------eEEEEEeEeccCCCCCccchH-HHHHHHHH
Q 009304 369 PKALCGLELYNGILMRYVKASSAY-----------LGK--QED-------SLDFDITYYRSKDPMTPRLYE-DILEEIEQ 427 (538)
Q Consensus 369 ~~~~~~~~~~~pi~iRfv~~s~a~-----------Ls~--~~d-------~~~i~i~~y~~~~~~~p~~~~-~~~~eie~ 427 (538)
-....++++++|||||++++|+.| ||+ +|+ ++||++++|+.. | ++ +||+++||
T Consensus 388 ~~~~~~~~v~~pvEvR~~~~D~~~~~~~~~~~~p~LS~~~~r~~~p~~d~~~~i~~~~~~~~----p--~~~~~~~~~E~ 461 (540)
T 3js8_A 388 YQQQGRYPMNGPVEIRVTGLDDPSEAALSGGVAPALSAIRPRPDHPEWNVAVWLDILTLPGT----P--YANQFYREIEQ 461 (540)
T ss_dssp HHHTTCCCCCSCEEEEEECCCCGGGSSSTTCCCCTTCTTCCCTTCTTCCEEEEEEEEECTTC----T--THHHHHHHHHH
T ss_pred hhhccCcccccceEEEEecCCchhhccccccCCcccCccCCCCCCCCcceEEEEEeeecCCC----c--cHHHHHHHHHH
Confidence 011234678999999999999999 686 566 999999999953 3 55 59999999
Q ss_pred HHHhhcCC-----eeccCCC-------CCcchhhHHHh----C-------CCHHHHHHHHHhcCCCCCCCchhhHhhh
Q 009304 428 LAVFKYGG-----FPHWGKN-------RNLVFDGVIKK----Y-------KNAGEFFKVKDKYDPLGLFSSEWTDQVL 482 (538)
Q Consensus 428 ~~~~k~gG-----rPHWgK~-------~~~~~~~~~~~----Y-------p~~~~F~~~r~~~DP~g~F~n~~~~~ll 482 (538)
++..+||| ||||||+ |..+.+.+++. | |+|++|+++|+++||+|+|+|+|+|+||
T Consensus 462 ~~~~~~~g~~~~~RPhW~K~~~~~~~~~~~~~~~l~~~~~~~y~~~~~~~~~~~~~~~~~~~~DP~~~F~n~~l~~ll 539 (540)
T 3js8_A 462 WIEANFNGSYAAVRPEWSKGWGYTDQAAWADSAMLQTTIPNAFRAGQPAAANWDAAKAALAAYDPYRLFSSPLLDSLG 539 (540)
T ss_dssp HHHHHSCTTTEEEEECTTSBCSCCSSCTTCCHHHHHTHHHHHTTTTCCGGGSHHHHHHHHHHHCTTCCSCCHHHHHHT
T ss_pred HHHHhcCCCccccCcccccccccccccccCCHHHHHhhchhhhccCCCCCCCHHHHHHHHHhcCCCcccCCHHHHHhh
Confidence 95555999 9999999 44466788888 9 9999999999999999999999999987
No 2
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=100.00 E-value=5.8e-66 Score=566.27 Aligned_cols=449 Identities=18% Similarity=0.206 Sum_probs=337.6
Q ss_pred CCCCCCCCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCCCccCC---CCcEEEEc-CCCCCeeEEeC--C
Q 009304 1 MFPDRSACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKLVCPDG---QDGLLIST-KYLNKIINIDT--E 74 (538)
Q Consensus 1 ~W~~~~~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~~~~~~---~~gv~Idl-~~ln~v~~vd~--~ 74 (538)
||++++.+.|..+++|+|++||+++|+.|++++.+|+++ |+|||+.++++.++ .+|++||| ++||+| ++|+ +
T Consensus 27 ~w~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~v~~~-G~G~s~~~~~l~~~~~~~~gvvIdl~~~l~~i-~vd~~~~ 104 (561)
T 2i0k_A 27 NWSKEIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPR-GAMAGWTPLTVEKGANVEKVILADTMTHLNGI-TVNTGGP 104 (561)
T ss_dssp CTTSSSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEE-CCCCCCCTTSSCTTCCCTTEEEEECTTTSCCE-EEECCSS
T ss_pred hhhhccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEE-CCCCCcccccccCCCcCCCeEEEechhhCCce-EecCcCC
Confidence 799999999999999999999999999999999999999 89999987665532 35799999 899997 9999 8
Q ss_pred CCEEEEeCCCCHHHHHHHHHHCCCcccccccccccchhhhhccCCcCCC----------ccCCCCchhcceeEEEEEeeC
Q 009304 75 AMTITMESGVTLRQIIGESAKAGLALPYTPYWWGLTIGGLIGTGAHGSS----------LWGRGSSIHDYVVELRIVSSG 144 (538)
Q Consensus 75 ~~~vtv~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~tvGG~i~tg~hGs~----------~~~~~G~~~d~V~~l~vV~~~ 144 (538)
.++|+||||+++.+|.++|.++|+++|+.++++.+||||++++|+||+. .. ++|.++|+|+++++|++|
T Consensus 105 ~~~v~v~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~TvGG~i~~~~~G~~l~~gG~~~~s~~-~~G~~~d~V~~~evV~~d 183 (561)
T 2i0k_A 105 VATVTAGAGASIEAIVTELQKHDLGWANLPAPGVLSIGGALAVNAHGAALPAVGQTTLPGH-TYGSLSNLVTELTAVVWN 183 (561)
T ss_dssp SCEEEEETTSBHHHHHHHHHHTTEECSSCCSCTTCBHHHHHHTTCCCSCCCCTTCCCCTTC-CSSCGGGGEEEEEEEEEC
T ss_pred ccEEEEcCCCCHHHHHHHHHHcCCcccccCCCCCcccCCCcccCCcccccccCCccccccc-ccccHhheEEEEEEEeCC
Confidence 8999999999999999999999999999999988999999999999984 32 489999999999999999
Q ss_pred CCCCCcccEEEcCCCccchhhhhcCCCCeEEEEEEEEEeEecCceeEEEEe-cCchhHHHH-------HhhhccccceeE
Q 009304 145 GPDDGYAKVRVLNENDQDLDAAKVSLGVLGVISQVTLKLQPLFKRSITFLM-KNDSELGDE-------AGSFGHQHEFAD 216 (538)
Q Consensus 145 G~~~g~~~v~~~~~~~~~f~a~~~s~G~lGVIt~vtl~l~p~~~~~~~~~~-~~~~~~~~~-------~~~~~~~~~~~~ 216 (538)
|+. ..++++++++++|+++..|+|. ||||++||++.|.++....... .+.+++.+. +.++.+++++.+
T Consensus 184 G~~---~~~~~~~~~~~dl~~a~~g~G~-giIt~~tl~l~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e 259 (561)
T 2i0k_A 184 GTT---YALETYQRNDPRITPLLTNLGR-CFLTSVTMQAGPNFRQRCQSYTDIPWRELFAPKGADGRTFEKFVAESGGAE 259 (561)
T ss_dssp SSS---EEEEEEETTSGGGHHHHSCTTS-SCEEEEEEECEECCEEEEEEECCSCHHHHTCCTTCSSSCHHHHHHHHSEEE
T ss_pred CCE---EEeeeccCCCccHHHHHhcCCC-EEEEEEEEEEEECCceEEEEEEccCHHHHHHHHhcccccHHHHHhcCCceE
Confidence 961 1255666677787777778888 9999999999999987654444 565666555 556667788999
Q ss_pred EEEeeCCCcEEEEecCCCCCCCCCCccccccccccchhhhhh--hhc--------cchhhhhhccccccccccc---chh
Q 009304 217 IVWYPSQHKALYRIDDRISSNATGNAVYNYIPFRSTLSATLA--TIR--------TTEENQESRSDANGKCIGA---KLV 283 (538)
Q Consensus 217 ~~w~P~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~r--------~~~~~~~~~~~~~~~~~~~---~~~ 283 (538)
++|+|+.+.++++.+.+.+.. ++++++...+.+....... ..| ...+.+. +......|..+ +..
T Consensus 260 ~~~~p~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~-~~~~~~l~~~~~~~p~~ 336 (561)
T 2i0k_A 260 AIWYPFTEKPWMKVWTVSPTK--PDSSNEVGSLGSAGSLVGKPPQAREVSGPYNYIFSDNLP-EPITDMIGAINAGNPGI 336 (561)
T ss_dssp EEECTTCSCCEEEEEEEC----------------------CCCTTSEECSSSCCCHHHHSCC-HHHHHHHHHHHTTCGGG
T ss_pred EEEccCCCeEEEEEEeCCCCC--ccccccccccccccccccCCcccccccccccchhhhhhh-HHHHHHHHHHhccCccc
Confidence 999999999887776554432 2222221111111000000 000 0000000 00001112221 112
Q ss_pred hhhhhhhccccccCCc-cccCcccccccccccccccccCCCCcccccccccCCCCCCccEEEEEEEE--eccchHHHHHH
Q 009304 284 TSTLVTSAFGLTNNGI-AFTGYPVIGHHNRLQSSGTCLDSPQDSLITACAWDPRIKGEFFHQTTFSI--RLSVVKSFIDD 360 (538)
Q Consensus 284 ~~~~~~~~~g~~~~~~-~~t~~pvvg~~~~~~~~~~~~~~~~~~~~~~~~w~~r~~~~~~~~~E~~v--P~~~~~~~i~d 360 (538)
...+..+.+++.+++. .+.+.++++++++++.. | +.++.+|+++||+| |++++.++|++
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~--~----------------~~~~~~f~~~e~av~~P~~~~~~~l~~ 398 (561)
T 2i0k_A 337 APLFGPAMYEITKLGLAATNANDIWGWSKDVQFY--I----------------KATTLRLTEGGGAVVTSRANIATVIND 398 (561)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSEEEEEHHHHHCC--C----------------CTTSCCCEEEEEEEEECGGGHHHHHHH
T ss_pred chHHHHHHHHhhccccccccCcceEeechHhhee--e----------------cCCCceEEEEEEEEcCcHHHHHHHHHH
Confidence 2222233333322221 23456789999998631 1 12346789999999 99999999999
Q ss_pred HHHHHHhCcc---cccCceeecceEEEEecCCCCCC-----------C---C--CC---C-eEEEEEeEeccCCCCCccc
Q 009304 361 IQKLIKLEPK---ALCGLELYNGILMRYVKASSAYL-----------G---K--QE---D-SLDFDITYYRSKDPMTPRL 417 (538)
Q Consensus 361 v~~l~~~~~~---~~~~~~~~~pi~iRfv~~s~a~L-----------s---~--~~---d-~~~i~i~~y~~~~~~~p~~ 417 (538)
++++++.+++ ..|++.+++|||+||+++|++|| | | ++ | +++|||++|++.+
T Consensus 399 l~~~i~~~~~~~~~~~~~~~~~pve~R~~~~d~~~L~~~~~~~~~~lS~~~p~~g~~~~~~t~~id~~~y~~~~------ 472 (561)
T 2i0k_A 399 FTEWFHERIEFYRAKGEFPLNGPVEIRCCGLDQAADVKVPSVGPPTISATRPRPDHPDWDVAIWLNVLGVPGTP------ 472 (561)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCSCEEEEEEECCCGGGCCSCCSCSCSSCTTCCCTTCTTCCEEEEEEEEECTTCT------
T ss_pred HHHHHHhchhhhhhcCCceeeccEEEEEecCchhhhccccccCCcccccccCCCCCCCCCeEEEEEEEecCCCC------
Confidence 9999986532 35778899999999999999999 5 3 23 6 9999999998763
Q ss_pred hH-HHHHHHHHHHHhhcCC-----eeccCCCCCcchh------hHH----HhC-------CCHHHHHHHHHhcCCCCCCC
Q 009304 418 YE-DILEEIEQLAVFKYGG-----FPHWGKNRNLVFD------GVI----KKY-------KNAGEFFKVKDKYDPLGLFS 474 (538)
Q Consensus 418 ~~-~~~~eie~~~~~k~gG-----rPHWgK~~~~~~~------~~~----~~Y-------p~~~~F~~~r~~~DP~g~F~ 474 (538)
+. +|++++|+|+..|||| ||||||++.++++ .++ ++| |+|++|+++|+++||+|+|+
T Consensus 473 ~~~~~~~~~e~i~~~~~gG~~~~~RphWaK~~~~~~~~~~~~~~~~~~y~~~Yg~~~~~~p~~~~f~~~r~~~DP~g~F~ 552 (561)
T 2i0k_A 473 GMFEFYREMEQWMRSHYNNDDATFRPEWSKGWAFGPDPYTDNDIVTNKMRATYIEGVPTTENWDTARARYNQIDPHRVFT 552 (561)
T ss_dssp THHHHHHHHHHHHHHHSBSSSEEEECCTTSCCSCSSSTTCCHHHHHTHHHHHTTTTSCTTSSHHHHHHHHHHHCTTCCSC
T ss_pred cHHHHHHHHHHHHHHhcCCCcCCCCCcccccCCccccccccHHHHHHHHHhhhccccCCCCCHHHHHHHHHhcCCCCccC
Confidence 55 7999999996555999 9999999999988 888 778 99999999999999999999
Q ss_pred chhhHhhhC
Q 009304 475 SEWTDQVLG 483 (538)
Q Consensus 475 n~~~~~llg 483 (538)
|+|+++|||
T Consensus 553 n~~~~rll~ 561 (561)
T 2i0k_A 553 NGFMDKLLP 561 (561)
T ss_dssp CHHHHHHCC
T ss_pred CHHHHHhcC
Confidence 999999996
No 3
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=100.00 E-value=1.8e-63 Score=536.03 Aligned_cols=428 Identities=18% Similarity=0.213 Sum_probs=317.2
Q ss_pred CCCCCCCCCcCEEEeCCCHHHHHHHHHHHHHc--CCceEEEeCCCCCCCCCCccCCCCcEEEEcCCCCCeeEEeCCCCEE
Q 009304 1 MFPDRSACKAADVAYPTSEQEIISVVSAATIA--KRKMKVATRFSHSIPKLVCPDGQDGLLISTKYLNKIINIDTEAMTI 78 (538)
Q Consensus 1 ~W~~~~~~~p~~v~~P~s~~el~~~v~~a~~~--~~~v~v~~ggghS~~~~~~~~~~~gv~Idl~~ln~v~~vd~~~~~v 78 (538)
||. ++.+.|..+++|+|++||+++|+.|+++ +.+++++ |+|||+.+.+.+ .+|++|||++||+|+++|+++++|
T Consensus 35 ~W~-~~~~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~-G~G~s~~~~~~~--~~gvvIdl~~l~~i~~~d~~~~~v 110 (481)
T 4feh_A 35 GWG-RTAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIAR-GLGRSYGDNAQN--GGGLVIDMTPLNTIHSIDADTKLV 110 (481)
T ss_dssp CTT-CCSCEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEE-CSSCSSSSTTCC--TTSEEEECTTCCCEEEEETTTTEE
T ss_pred ccc-CCCCCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEE-eCCcCCCCCCCC--cCeEEEECccCCCceEEcCCCCEE
Confidence 795 5799999999999999999999999999 7999999 899998766542 369999999999999999999999
Q ss_pred EEeCCCCHHHHHHHHHHCCCcccccccccccchhhhhccCCcCCCccCCCCchhcceeEEEEEeeCCCCCCcccEEEcCC
Q 009304 79 TMESGVTLRQIIGESAKAGLALPYTPYWWGLTIGGLIGTGAHGSSLWGRGSSIHDYVVELRIVSSGGPDDGYAKVRVLNE 158 (538)
Q Consensus 79 tv~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~~l~vV~~~G~~~g~~~v~~~~~ 158 (538)
+||||+++.+|.++|.++|+++|+.+++..+||||+|++|+||++.. .+|.++|+|+++++|+++|+ ++++++
T Consensus 111 ~v~aGv~l~~L~~~l~~~Gl~l~~~~g~~~~tvGGaia~~a~G~~~~-~~G~~~d~V~~~evV~~dG~------v~~~s~ 183 (481)
T 4feh_A 111 DIDAGVNLDQLMKAALPFGLWVPVLPGTRQVTVGGAIACDIHGKNHH-SAGSFGNHVRSMDLLTADGE------IRHLTP 183 (481)
T ss_dssp EEETTCBHHHHHHHHGGGTEECSCCCSCSCCBHHHHHHTTCCCTTHH-HHCCGGGGEEEEEEECTTSC------EEEECS
T ss_pred EEcCCccHHHHHHHHHHcCCEEEEeCCcCccccCCccccccCCCCcc-cCCCccceEeEEEEEeCCCC------EEEeCC
Confidence 99999999999999999999999999999999999999999999865 47899999999999999999 888876
Q ss_pred C--cc-chhhhhcCCCCeEEEEEEEEEeEecCceeE---EEEecCchhHHHHHhhhccccceeEEEEe------eCCCcE
Q 009304 159 N--DQ-DLDAAKVSLGVLGVISQVTLKLQPLFKRSI---TFLMKNDSELGDEAGSFGHQHEFADIVWY------PSQHKA 226 (538)
Q Consensus 159 ~--~~-~f~a~~~s~G~lGVIt~vtl~l~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~w~------P~~~~~ 226 (538)
+ ++ +|+++++|+|.+||||++||++.|.++... .+...+.+++.+.+.+...++++++++|+ |+.++.
T Consensus 184 ~~~~~dLf~a~rgs~G~~GIIt~~tl~l~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~w~d~~~~~~~~~r~ 263 (481)
T 4feh_A 184 TGEDAELFWATVGGNGLTGIIMRATIEMTPTSTAYFIADGDVTASLDETIALHSDGSEARYTYSSAWFDAISAPPKLGRA 263 (481)
T ss_dssp SSTTHHHHHHHTTCTTTTCEEEEEEEECEECSCSEEEEEEEECSSHHHHHHHHSSSGGGGCSEEEEEECCSSCTTSTTCE
T ss_pred CCCChHHHHHhhccCCCceEEEEEEEEEEeCCccEEEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEEeccCCCCCCCeE
Confidence 4 44 499999999999999999999999876433 34445556666677666677788999999 677888
Q ss_pred EEEecCCCCCCCCC-CccccccccccchhhhhhhhccchhhhhhcccccccccccchhhhhhhhhccccccCCccccCcc
Q 009304 227 LYRIDDRISSNATG-NAVYNYIPFRSTLSATLATIRTTEENQESRSDANGKCIGAKLVTSTLVTSAFGLTNNGIAFTGYP 305 (538)
Q Consensus 227 ~~~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~t~~p 305 (538)
++...++.+..... ....+.+.+.+... ..........+ .++.....+....+.... . +...
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~vp~~~p~~~-----------l~~~~~~~~~~~~~~~~~--~--~~~~ 326 (481)
T 4feh_A 264 AVSRGRLATVEQLPAKLRSEPLKFDAPQL--LTLPDVFPNGL-----------ANKYTFGPIGELWYRKSG--T--YRGK 326 (481)
T ss_dssp EEEEEEECCGGGSCGGGGGSTTCCC------------------------------------------CCSC--C--EEEE
T ss_pred EEEeCCcCcccccccccccCccccccccc--cCCCccCcHHH-----------HhHHHHHHHHHHHHhhCc--c--cccc
Confidence 88777665422110 00011111100000 00000000000 000000011111110000 0 0000
Q ss_pred cccccccccccccccCCCCcccccccccCCCCCC-ccEEEEEEEEeccchHHHHHHHHHHHHhCcccccCceeecceEEE
Q 009304 306 VIGHHNRLQSSGTCLDSPQDSLITACAWDPRIKG-EFFHQTTFSIRLSVVKSFIDDIQKLIKLEPKALCGLELYNGILMR 384 (538)
Q Consensus 306 vvg~~~~~~~~~~~~~~~~~~~~~~~~w~~r~~~-~~~~~~E~~vP~~~~~~~i~dv~~l~~~~~~~~~~~~~~~pi~iR 384 (538)
+..+ +.+ . .|.|. ...|+ |+.+ ..|.|+||+||++ +.++|++|++++.... ...++|+++|
T Consensus 327 ~~~~--~~~-----~-~p~d~---v~~~n-r~yg~~~f~q~e~~vP~~-~~~al~~l~~~i~~~~-----~~~~~~v~~R 388 (481)
T 4feh_A 327 VQNL--TQF-----Y-HPLDM---FGEWN-RAYGPAGFLQYQFVIPTE-AVDEFKKIIGVIQASG-----HYSFLNVFKL 388 (481)
T ss_dssp EEEH--HHH-----H-C----------CH-HHHTTTSEEEEEEEEETT-CHHHHHHHHHHHHHTT-----CCCSCCEEEE
T ss_pred cccc--eee-----e-chhhh---ccccc-cccCCCCcEEEEEEeccc-HHHHHHHHHHHHHhcC-----CCceEEEEEE
Confidence 0000 000 0 11111 12333 2222 3489999999999 9999999999998643 2367999999
Q ss_pred EecCCCCCCCCCCCeEEEEEeEeccCCCCCccchHHHHHHHHHHHHhhcCCeeccCCCCCcchhhHHHhCCCHHHHHHHH
Q 009304 385 YVKASSAYLGKQEDSLDFDITYYRSKDPMTPRLYEDILEEIEQLAVFKYGGFPHWGKNRNLVFDGVIKKYKNAGEFFKVK 464 (538)
Q Consensus 385 fv~~s~a~Ls~~~d~~~i~i~~y~~~~~~~p~~~~~~~~eie~~~~~k~gGrPHWgK~~~~~~~~~~~~Yp~~~~F~~~r 464 (538)
|+++|+.|||++.+.++|.+++|... .++++++++|++ +.+|||||||||++.++++++++.||+|++|+++|
T Consensus 389 ~~~~d~~~LS~~~~~~tlal~~~~~~------~~~~~~~~le~i-~~~~gGRphw~K~~~~~~~~~~~~YP~~~~F~~lr 461 (481)
T 4feh_A 389 FGPRNQAPLSFPIPGWNICVDFPIKD------GLGKFVSELDRR-VLEFGGRLYTAKDSRTTAETFHAMYPRVDEWISVR 461 (481)
T ss_dssp ECCCCSCTTCCCCSEEEEEEEEECCT------THHHHHHHHHHH-HHHTTCEECGGGCSSCCHHHHHHHCTTHHHHHHHH
T ss_pred EeCCCCccCCCCCCceEEEEEccCCc------cHHHHHHHHHHH-HHHcCCEecchhccCCCHHHHHHhCcCHHHHHHHH
Confidence 99999999999888888888877532 388999999999 79999999999999999999999999999999999
Q ss_pred HhcCCCCCCCchhhHhh
Q 009304 465 DKYDPLGLFSSEWTDQV 481 (538)
Q Consensus 465 ~~~DP~g~F~n~~~~~l 481 (538)
+++||+|+|+|+|++++
T Consensus 462 ~~~DP~g~F~n~~~rr~ 478 (481)
T 4feh_A 462 RKVDPLRVFASDMARRL 478 (481)
T ss_dssp HHHCTTCCBCCHHHHHT
T ss_pred HhhCCccccCCHHHHhh
Confidence 99999999999999986
No 4
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=100.00 E-value=1.4e-60 Score=507.87 Aligned_cols=405 Identities=20% Similarity=0.302 Sum_probs=323.7
Q ss_pred CCCCCCCCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCCCccCCCCcEEEEcCCCCCeeEEeCCCCEEEE
Q 009304 1 MFPDRSACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKLVCPDGQDGLLISTKYLNKIINIDTEAMTITM 80 (538)
Q Consensus 1 ~W~~~~~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~~~~~~~~gv~Idl~~ln~v~~vd~~~~~vtv 80 (538)
||+++..+.|..+++|+|++||+++|+.| .+++++ |+|||+++++++ +.+|++|||++||+|+++|+++++|+|
T Consensus 12 ~w~~~~~~~p~~v~~P~s~~ev~~~v~~a----~~v~~~-G~G~s~~~~~~~-~~~g~vi~l~~l~~i~~~d~~~~~v~v 85 (422)
T 2vfr_A 12 NWAGNITYTAKELLRPHSLDALRALVADS----ARVRVL-GSGHSFNEIAEP-GDGGVLLSLAGLPSVVDVDTAARTVRV 85 (422)
T ss_dssp CSSSSCBCSCSSCBCCSSHHHHHHHHHHC----SSEEEC-SSCCCCSSTTCC-CTTCEEECSTTSCCCEEEETTTTEEEE
T ss_pred cCCCCccCCCCEEEeCCCHHHHHHHHHhC----CCEEEE-ECCCCCCCCccC-CCCcEEEEhhhCCCcEEEcCCCCEEEE
Confidence 79999999999999999999999999998 689998 899999998873 456999999999999999999999999
Q ss_pred eCCCCHHHHHHHHHHCCCcccccccccccchhhhhccCCcCCCccCCCCchhcceeEEEEEeeCCCCCCcccEEEcCCCc
Q 009304 81 ESGVTLRQIIGESAKAGLALPYTPYWWGLTIGGLIGTGAHGSSLWGRGSSIHDYVVELRIVSSGGPDDGYAKVRVLNEND 160 (538)
Q Consensus 81 ~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~~l~vV~~~G~~~g~~~v~~~~~~~ 160 (538)
|||+++.+|.++|.++|+.+|..++++.+||||++++|+||++. ++|.++|+|+++++|+++|+ ++++++++
T Consensus 86 ~aG~~l~~l~~~l~~~Gl~l~~~~~~~~~tvGG~i~~~~~G~~~--~~G~~~d~v~~~~vv~~~G~------~~~~~~~~ 157 (422)
T 2vfr_A 86 GGGVRYAELARVVHARGLALPNMASLPHISVAGSVATGTHGSGV--GNGSLASVVREVELVTADGS------TVVIARGD 157 (422)
T ss_dssp ETTCBHHHHHHHHHHTTEECSCCCSSSCSBHHHHHHHTCCCCCT--TCCCGGGGEEEEEEECTTSC------EEEEETTS
T ss_pred cCCCCHHHHHHHHHHcCCcccCCCCCCCeeHHHHHhcCCCCCCc--ccCcHHHheEEEEEEeCCCC------EEEeCCCC
Confidence 99999999999999999999988899999999999999999885 58999999999999999999 88887643
Q ss_pred cchhhhhcCCCCeEEEEEEEEEeEecCceeEEEE-ecCchhHH-HHHhhhccccceeEEEEeeCCCc--EEEEecCCCCC
Q 009304 161 QDLDAAKVSLGVLGVISQVTLKLQPLFKRSITFL-MKNDSELG-DEAGSFGHQHEFADIVWYPSQHK--ALYRIDDRISS 236 (538)
Q Consensus 161 ~~f~a~~~s~G~lGVIt~vtl~l~p~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~w~P~~~~--~~~~~~~r~~~ 236 (538)
..|+++++|+|+|||||++||++.|.++...... ..+.+++. +.+.++...+.+.+++| |..+. ++....++++.
T Consensus 158 ~~f~~~~g~~G~lGvit~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~~~~~~~~~~~~~~~~~ 236 (422)
T 2vfr_A 158 ERFGGAVTSLGALGVVTSLTLDLEPAYEMEQHVFTELPLAGLDPATFETVMAAAYSVSLFT-DWRAPGFRQVWLKRRTDR 236 (422)
T ss_dssp TTGGGTSSCTTTTCEEEEEEEECEECCEEEEEEEEEECSTTCCHHHHHHHHTSSSEEEEEE-CSSSSSEEEEEEEEETTS
T ss_pred CCcceEEecCCCCEEEEEEEEEEEecCceEEEEEecCCHHHHHHHHHHHHHhcCCcEEEEe-cCCCceeEEEEecCcCCC
Confidence 3399999999999999999999999998654433 66777787 88888777788999999 99887 55555444432
Q ss_pred CCCCCccccccccccchhhhhhhhccchhhhhhcccccccccccchhhhhhhhhccccccCCccccCccccccccccccc
Q 009304 237 NATGNAVYNYIPFRSTLSATLATIRTTEENQESRSDANGKCIGAKLVTSTLVTSAFGLTNNGIAFTGYPVIGHHNRLQSS 316 (538)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~t~~pvvg~~~~~~~~ 316 (538)
..+. . .|. +.+ |......+... .+.+.. ....++..++++..
T Consensus 237 ~~~~-~-----~~~----------~~~-------------~~~~~~~p~~~---~~~~~~------~~~~~~~~~~~~~~ 278 (422)
T 2vfr_A 237 PLDG-F-----PYA----------APA-------------AEKMHPVPGMP---AVNCTE------QFGVPGPWHERLPH 278 (422)
T ss_dssp CCCC-C-----TTS----------EEC-------------SSCCCSSTTSC---GGGBCC------CTTCCEEGGGTSSS
T ss_pred CCCC-c-----hHH----------HHH-------------HhhcccCcccC---hhhhcc------cCCccccHHHhccc
Confidence 2111 0 000 000 00000000000 000110 11234555665431
Q ss_pred ccccCCCCcccccccccCCCCCCccEEEEEEEEeccchHHHHHHHHHHHHhCcccccCceeecceEEEEecCCCCCCCC-
Q 009304 317 GTCLDSPQDSLITACAWDPRIKGEFFHQTTFSIRLSVVKSFIDDIQKLIKLEPKALCGLELYNGILMRYVKASSAYLGK- 395 (538)
Q Consensus 317 ~~~~~~~~~~~~~~~~w~~r~~~~~~~~~E~~vP~~~~~~~i~dv~~l~~~~~~~~~~~~~~~pi~iRfv~~s~a~Ls~- 395 (538)
.| ..|.|+ +..|+++|++||++++.++|+++++++++ ++..++|+++||+++++.|||+
T Consensus 279 -~~-----------~~~~p~--~~~~~~~e~avP~e~~~~~l~~l~~~~~~------~~~~~~~v~~r~~~~~~~~Ls~~ 338 (422)
T 2vfr_A 279 -FR-----------AEFTPS--SGAELQSEYLMPREHALAALHAMDAIRET------LAPVLQTCEIRTVAADAQWLSPA 338 (422)
T ss_dssp -BC-----------TTCCCS--CCSCEEEEEEEEGGGHHHHHHHHHHTHHH------HGGGEEEEEEEEECCBCSTTCTT
T ss_pred -cc-----------ccccCC--cccEEEEEEEEEHHHHHHHHHHHHHHHHh------CCCceeeEEEEeecCCccccCCC
Confidence 11 135543 35688999999999999999999999987 1346789999999999999998
Q ss_pred -CCCeEEEEEeEeccCCCCCccchHHHHHHHHHHHHhhcCCeeccCCCCCcchhhHHHhCCCHHHHHHHHHhcCCCCCCC
Q 009304 396 -QEDSLDFDITYYRSKDPMTPRLYEDILEEIEQLAVFKYGGFPHWGKNRNLVFDGVIKKYKNAGEFFKVKDKYDPLGLFS 474 (538)
Q Consensus 396 -~~d~~~i~i~~y~~~~~~~p~~~~~~~~eie~~~~~k~gGrPHWgK~~~~~~~~~~~~Yp~~~~F~~~r~~~DP~g~F~ 474 (538)
+++++ ++++|.+.+ ...+++|++++|++ +.+|||||||||++.++++.++++||+|++|+++|++|||+|+|.
T Consensus 339 ~~r~~~--~l~~~~~~~---~~~~~~~~~~~~~l-v~~~gG~~~wgk~~~~~~~~~~~~Yp~~~~f~~vk~~~DP~g~f~ 412 (422)
T 2vfr_A 339 YGRDTV--AAHFTWVED---TAAVLPVVRRLEEA-LVPFAARPHWGKVFTVPAGELRALYPRLADFGALAGALDPAGKFT 412 (422)
T ss_dssp BTSCEE--EEEEEECSC---HHHHHHHHHHHHHH-HGGGTCEECTTSCCCCCHHHHHTTCTTHHHHHHHHHHHCTTCTTC
T ss_pred CCCCeE--EEEEecCCC---chhHHHHHHHHHHH-HHHcCCcccccccCCCCHHHHHHHCcCHHHHHHHHHHhCCCCccC
Confidence 58888 555565442 22456999999999 699999999999999999999999999999999999999999999
Q ss_pred chhhHhhhCC
Q 009304 475 SEWTDQVLGL 484 (538)
Q Consensus 475 n~~~~~llg~ 484 (538)
|+|++++||+
T Consensus 413 n~~~~r~~~~ 422 (422)
T 2vfr_A 413 NAFVRGVLAG 422 (422)
T ss_dssp CHHHHHHHC-
T ss_pred CHHHHHhhCC
Confidence 9999999974
No 5
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=9.2e-38 Score=335.57 Aligned_cols=400 Identities=16% Similarity=0.135 Sum_probs=260.0
Q ss_pred CCCCCCCCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCCCccCCCCcEEEEcCCCCCeeEEeCCCCEEEE
Q 009304 1 MFPDRSACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKLVCPDGQDGLLISTKYLNKIINIDTEAMTITM 80 (538)
Q Consensus 1 ~W~~~~~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~~~~~~~~gv~Idl~~ln~v~~vd~~~~~vtv 80 (538)
+|+.+....|..+++|+|++||+++|+.|+++++++.++ |+||++.+.+. ..+|++|||++||+| ++|++.++|+|
T Consensus 30 ~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~-ggGh~~~~~~~--~~~gvvi~l~~l~~i-~~d~~~~~v~v 105 (459)
T 2bvf_A 30 IWDGRHLQRPSLIARCLSAGDVAKSVRYACDNGLEISVR-SGGHNPNGYAT--NDGGIVLDLRLMNSI-HIDTAGSRARI 105 (459)
T ss_dssp CSCTTCCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEE-SSCCCTTCTTC--CSSSEEEECTTCCCE-EEETTTTEEEE
T ss_pred HhhhhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEE-cCCcCCCCccc--cCCeEEEECCCCCCE-EECCCCCEEEE
Confidence 699999999999999999999999999999999999999 89999876542 346899999999996 89999999999
Q ss_pred eCCCCHHHHHHHHHHCCCcccccccccccchhhhhccCCcCCCccCCCCchhcceeEEEEEeeCCCCCCcccEEEcCCC-
Q 009304 81 ESGVTLRQIIGESAKAGLALPYTPYWWGLTIGGLIGTGAHGSSLWGRGSSIHDYVVELRIVSSGGPDDGYAKVRVLNEN- 159 (538)
Q Consensus 81 ~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~~l~vV~~~G~~~g~~~v~~~~~~- 159 (538)
|||++|.+|.++|.++|+++|. +..+.++|||++.+|+||.... ++|.++|+|++++||+++|+ ++++++.
T Consensus 106 ~aG~~~~~l~~~l~~~Gl~~~~-g~~~~~gi~G~~~gGg~g~~~~-~~G~~~d~v~~~~vV~~~G~------i~~~~~~~ 177 (459)
T 2bvf_A 106 GGGVISGDLVKEAAKFGLAAVT-GMHPKVGFCGLALNGGVGFLTP-KYGLASDNILGATLVTATGD------VIYCSDDE 177 (459)
T ss_dssp ETTCBHHHHHHHHHTTTEEECC-CSCTTSBHHHHHTTCCCCTTHH-HHCCGGGGEEEEEEECTTSC------EEEEESSS
T ss_pred CCCCCHHHHHHHHHHcCCEecC-CCCCCcccceeecCCCCccccc-cccCHhHhEEEEEEEcCCCe------EEEeCCCC
Confidence 9999999999999999999988 4456789999999999997765 57899999999999999999 8887763
Q ss_pred cc-chhhhhcCCCCeEEEEEEEEEeEec-CceeEEEEecCch-----hHHHHHhhhccc-cc--eeEEEEeeCC--CcEE
Q 009304 160 DQ-DLDAAKVSLGVLGVISQVTLKLQPL-FKRSITFLMKNDS-----ELGDEAGSFGHQ-HE--FADIVWYPSQ--HKAL 227 (538)
Q Consensus 160 ~~-~f~a~~~s~G~lGVIt~vtl~l~p~-~~~~~~~~~~~~~-----~~~~~~~~~~~~-~~--~~~~~w~P~~--~~~~ 227 (538)
++ +|+++++|.|+|||||++|||+.|. +.........+.+ ++.+.+.++... .+ +..+ ..|.. +...
T Consensus 178 ~~dLf~a~rg~~g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 256 (459)
T 2bvf_A 178 RPELFWAVRGAGPNFGVVTEVEVQLYELPRKMLAGFITWAPSVSELAGLLTSLLDALNEMADHIYPSV-FVGVDENRAPS 256 (459)
T ss_dssp SHHHHHHHHHHGGGTCEEEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTCCCEE-EEEECTTCCEE
T ss_pred ChhhHhHhhccCCccEEEEEEEEEEEECCCcEEEEEEEechHHhhHHHHHHHHHHHHHhCcHhhcccc-ccCcccCCCce
Confidence 44 5999999999999999999999999 4444333333332 333444444332 11 1121 22210 1110
Q ss_pred EEecCCCCCCCCCCccccccccccchhhhhhhhccchhhhhhcccccccccccchhhhhhhhhccccccCCccccCcccc
Q 009304 228 YRIDDRISSNATGNAVYNYIPFRSTLSATLATIRTTEENQESRSDANGKCIGAKLVTSTLVTSAFGLTNNGIAFTGYPVI 307 (538)
Q Consensus 228 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~t~~pvv 307 (538)
... .+.+...... ..+.++...+ . ...+.+. .....|.
T Consensus 257 ~~~---------------~~~~~g~~~~---~~~~~~~~~~-~--------------------~~~~~~~-~~~~~~~-- 294 (459)
T 2bvf_A 257 VTV---------------CVGHLGGLDI---AERDIARLRG-L--------------------GRTVSDS-IAVRSYD-- 294 (459)
T ss_dssp EEE---------------EEECCSCHHH---HHHHHHHHHT-T--------------------SCCSEEC-CEEECHH--
T ss_pred EEE---------------EEEEeCCHHH---HHHHHHHHHH-h--------------------Ccchhcc-eeecCHH--
Confidence 000 0001000000 0000000000 0 0000000 0000000
Q ss_pred cccccccccccccCCCCcccccccccCCCCCCccEEE-EEEEEeccchHHHHHHHHHHHHhCcccccCceeecceEEEEe
Q 009304 308 GHHNRLQSSGTCLDSPQDSLITACAWDPRIKGEFFHQ-TTFSIRLSVVKSFIDDIQKLIKLEPKALCGLELYNGILMRYV 386 (538)
Q Consensus 308 g~~~~~~~~~~~~~~~~~~~~~~~~w~~r~~~~~~~~-~E~~vP~~~~~~~i~dv~~l~~~~~~~~~~~~~~~pi~iRfv 386 (538)
.. ..+ ....| ..... ...++. .++.+|.+...+.++.+.+.+...+.. ...+.+++| .
T Consensus 295 ~~-~~~-~~~~~------------~~~~~--~~~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~-g 353 (459)
T 2bvf_A 295 EV-VAL-NAEVG------------SFEDG--MSNLWIDREIAMPNARFAEAIAGNLDKFVSEPAS----GGSVKLEIE-G 353 (459)
T ss_dssp HH-HHH-HHHHS------------CCCCS--CEEEEEEEEECSCHHHHHHHHHTTGGGCEEETTT----TEEEEEEEE-C
T ss_pred HH-Hhc-ccccc------------cCCCC--CcceEeccccccCCCCCHHHHHHHHHHHhhCCCC----CceeEEEEe-C
Confidence 00 000 00000 00000 123343 688888666677777666655432200 013467777 3
Q ss_pred c-CCCCCCC--CCCCeEEEEEeEeccCCCCCccchHHHHHHHHHHHHhhcCCeeccCCCCCcc----hhhHHHhC-CC-H
Q 009304 387 K-ASSAYLG--KQEDSLDFDITYYRSKDPMTPRLYEDILEEIEQLAVFKYGGFPHWGKNRNLV----FDGVIKKY-KN-A 457 (538)
Q Consensus 387 ~-~s~a~Ls--~~~d~~~i~i~~y~~~~~~~p~~~~~~~~eie~~~~~k~gGrPHWgK~~~~~----~~~~~~~Y-p~-~ 457 (538)
. .++.+.+ +.|++.++.+..+...+......+.++++++++. +..+.+|||||+..|+. ++..++.| ++ +
T Consensus 354 g~~~~~~~ta~~~R~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~-l~~~~~~p~~g~Y~N~~d~~~~~~~~~~yG~~n~ 432 (459)
T 2bvf_A 354 MPFGNPKRTPARHRDAMGVLALAEWSGAAPGSEKYPELARELDAA-LLRAGVTTSGFGLLNNNSEVTAEMVAEVYKPEVY 432 (459)
T ss_dssp CCCCCTTCCSSCCCSSCEEEEEEEECTTSTTTTHHHHHHHHHHHH-HHHTTCEEEEECCGGGCSSCCHHHHHHHHCHHHH
T ss_pred CccCCCCCCCcccCCcceEEEEEEeCCCccchHHHHHHHHHHHHH-hcccccCCCCCeeeCCCCCcchHHHHHHhCcchH
Confidence 2 1333333 2577655555544332210122467888999887 78999999999998873 44567788 66 9
Q ss_pred HHHHHHHHhcCCCCCCCchh
Q 009304 458 GEFFKVKDKYDPLGLFSSEW 477 (538)
Q Consensus 458 ~~F~~~r~~~DP~g~F~n~~ 477 (538)
++++++|++|||+++|.+..
T Consensus 433 ~rL~~iK~kyDP~~vF~~~~ 452 (459)
T 2bvf_A 433 SRLAAVKREYDPENRFRHNY 452 (459)
T ss_dssp HHHHHHHHHHCTTCCCCSSS
T ss_pred HHHHHHHHHhCcccccCCCC
Confidence 99999999999999999854
No 6
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=100.00 E-value=5.8e-37 Score=342.31 Aligned_cols=202 Identities=20% Similarity=0.178 Sum_probs=172.2
Q ss_pred CCCCCCCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCCCccC---CCCcEEEEcCCCCCeeEEeCCCCEE
Q 009304 2 FPDRSACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKLVCPD---GQDGLLISTKYLNKIINIDTEAMTI 78 (538)
Q Consensus 2 W~~~~~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~~~~~---~~~gv~Idl~~ln~v~~vd~~~~~v 78 (538)
|.+.+...|.+|++|+|++||+++|++|++++++|.+. |||||.++.+.+. ..++|+|||++||+|++||++++++
T Consensus 198 ~~g~~~~~P~aVV~P~s~eeV~~iv~~A~~~~ipVvpr-GgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~a 276 (658)
T 4bby_A 198 REGMFERIPDIVLWPTCHDDVVKIVNLACKYNLCIIPI-GGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTA 276 (658)
T ss_dssp HSSCCSCCCSEEEECCSHHHHHHHHHHHHHTTCEEEEE-SSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEE
T ss_pred hCCcccCCcCEEEeeCCHHHHHHHHHHHHHCCCeEEEE-CCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEE
Confidence 67788889999999999999999999999999999988 8999987665432 3457999999999999999999999
Q ss_pred EEeCCCCHHHHHHHHHHCCCcccccccc-cccchhhhhccCCcCCCccCCCCchhcceeEEEEEeeCCCCCCcccEEEcC
Q 009304 79 TMESGVTLRQIIGESAKAGLALPYTPYW-WGLTIGGLIGTGAHGSSLWGRGSSIHDYVVELRIVSSGGPDDGYAKVRVLN 157 (538)
Q Consensus 79 tv~aGv~l~~L~~~l~~~Gl~l~~~~~~-~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~~l~vV~~~G~~~g~~~v~~~~ 157 (538)
||||||++.+|.++|+++|+.+|..|+. ...||||+++||++|.... +||.+.|+|++++||+|+|+ |.+..
T Consensus 277 tVeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG~iAtna~G~~s~-rYG~~~d~VlgleVVlpdG~------i~~~~ 349 (658)
T 4bby_A 277 HVEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWISTRASGMKKN-IYGNIEDLVVHMKVVTPRGV------IEKSC 349 (658)
T ss_dssp EEETTCBHHHHHHHHHHHTEECCCCCTTTTTCBHHHHHHHTCCCTTHH-HHCCHHHHEEEEEEEETTEE------EECSC
T ss_pred EEecCchHHHHHHHHHHcCCccCCCCCCccccEEeehhhcCCCCCCcc-CcCCHHHheeeEEEEeCCCc------ccccc
Confidence 9999999999999999999999998864 5689999999999999887 58999999999999999998 55432
Q ss_pred C------CccchhhhhcCCCCeEEEEEEEEEeEecCceeEE--EEecCchhHHHHHhhhccc
Q 009304 158 E------NDQDLDAAKVSLGVLGVISQVTLKLQPLFKRSIT--FLMKNDSELGDEAGSFGHQ 211 (538)
Q Consensus 158 ~------~~~~f~a~~~s~G~lGVIt~vtl~l~p~~~~~~~--~~~~~~~~~~~~~~~~~~~ 211 (538)
. +.++++.++||+|+|||||++||||.|.++...+ +.+.+.++..+.+.++.+.
T Consensus 350 ~~~k~~aGyDL~~L~iGSEGTLGIITeatLrL~P~P~~~~~~~~~f~d~~~a~~av~~i~~~ 411 (658)
T 4bby_A 350 QGPRMSTGPDIHHFIMGSEGTLGVITEATIKIRPTPEYQKYGSVAFPNFEQGVACLREIAKQ 411 (658)
T ss_dssp CCSSCCSSSCTHHHHTTCTTSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHHHHT
T ss_pred cccccCCCcCHHHHhccCCCcCcceeeeeeeeccCCccccccccccCCchhhhhhHHHHHHc
Confidence 2 3355888999999999999999999999985433 3334455666666665543
No 7
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.8e-33 Score=302.44 Aligned_cols=201 Identities=23% Similarity=0.217 Sum_probs=171.8
Q ss_pred CCCCCCCCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCCCccCCCCcEEEEcCCCCCeeEEeCCCCEEEE
Q 009304 1 MFPDRSACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKLVCPDGQDGLLISTKYLNKIINIDTEAMTITM 80 (538)
Q Consensus 1 ~W~~~~~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~~~~~~~~gv~Idl~~ln~v~~vd~~~~~vtv 80 (538)
+|+.+....|..|++|+|++||+++|+.|+++++++.++ |+|||+.+.+.+ ..++++|||++||+|+++|+++++|+|
T Consensus 43 d~~~~~~~~p~~vv~P~s~eeV~~~v~~a~~~~~pv~~~-GgGt~~~g~~~~-~~ggvvIdl~~m~~i~~id~~~~~v~V 120 (476)
T 3pm9_A 43 EERNLYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQ-GGNTGLVGGQTP-HNGEVVISLKRMDKIREIDTSSNTITV 120 (476)
T ss_dssp CTTCCCBCCCSCEECCCSHHHHHHHHHHHHHHTCCEEEE-SSSCCSSSTTCC-CSSCEEEECTTCCCEEEEETTTTEEEE
T ss_pred ccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEE-eCCCCCCCCccC-CCCcEEEEeeCCCceEEEcCCCCeEEE
Confidence 488788899999999999999999999999999999998 899999888776 345899999999999999999999999
Q ss_pred eCCCCHHHHHHHHHHCCCcccccccc-cccchhhhhccCCcCCCccCCCCchhcceeEEEEEeeCCCCCCcccEEEcCC-
Q 009304 81 ESGVTLRQIIGESAKAGLALPYTPYW-WGLTIGGLIGTGAHGSSLWGRGSSIHDYVVELRIVSSGGPDDGYAKVRVLNE- 158 (538)
Q Consensus 81 ~aGv~l~~L~~~l~~~Gl~l~~~~~~-~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~~l~vV~~~G~~~g~~~v~~~~~- 158 (538)
|||+++.+|.++|.++|+.+|..+.. ...||||+++||+||.+.. +||.++|+|+++++|+++|+ +++.+.
T Consensus 121 ~aGv~~~~l~~~l~~~Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~-~yG~~~d~V~~levV~~dG~------v~~~~~~ 193 (476)
T 3pm9_A 121 EAGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAAL-AYGLARDMALGVEVVLADGR------VMNLLSK 193 (476)
T ss_dssp ETTCBHHHHHHHHHHTTEECCCCCTTTTTCBHHHHHHHTCCCTTHH-HHCCHHHHEEEEEEECTTSC------EEECCCC
T ss_pred CCCcCHHHHHHHHHHhCCccCCCCCCCCcEEEccccCCCCCCCccc-ccCcHHHheeEEEEEccCCe------EEEcCCc
Confidence 99999999999999999998887654 4589999999999999876 58999999999999999999 776532
Q ss_pred ------CccchhhhhcCCCCeEEEEEEEEEeEecCceeEE--EEecCchhHHHHHhhhcc
Q 009304 159 ------NDQDLDAAKVSLGVLGVISQVTLKLQPLFKRSIT--FLMKNDSELGDEAGSFGH 210 (538)
Q Consensus 159 ------~~~~f~a~~~s~G~lGVIt~vtl~l~p~~~~~~~--~~~~~~~~~~~~~~~~~~ 210 (538)
+.++++++++|.|+|||||++||++.|.++...+ ..+.+.++..+.+.++.+
T Consensus 194 ~~k~~~g~dl~~l~~Gs~GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~~ 253 (476)
T 3pm9_A 194 LKKDNTGYDLRDLFIGAEGTLGIITAATLKLFPKPRAVETAFVGLQSPDDALKLLGIAQG 253 (476)
T ss_dssp CSCCCSSCCCHHHHTTSTTSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHHHHHHHHH
T ss_pred ccCCCCCcCHHHHhccCCCCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHHHHHHHHH
Confidence 2234888899999999999999999999885432 233344555555555543
No 8
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=3.9e-32 Score=294.80 Aligned_cols=181 Identities=18% Similarity=0.229 Sum_probs=159.0
Q ss_pred CCCCCCCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCCCcc--CCCCcEEEEcCCCCCeeEEeCCCCEEE
Q 009304 2 FPDRSACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKLVCP--DGQDGLLISTKYLNKIINIDTEAMTIT 79 (538)
Q Consensus 2 W~~~~~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~~~~--~~~~gv~Idl~~ln~v~~vd~~~~~vt 79 (538)
|+.....+|.+|+.|+|++||+++|+.|++++++|.|+ +||||+.+.+.. ..+++++|||++||+ +++|+++++|+
T Consensus 45 w~~~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~~~~~r-~gGh~~~g~s~~~~~~~~~~~idl~~~~~-v~~d~~~~~~~ 122 (500)
T 3tsh_A 45 WSSPDNVKPLYIITPTQVSHIQSAVVCGRRHSVRIRVR-SGGHDYEGLSYRSLQPETFAVVDLNKMRA-VWVDGKARTAW 122 (500)
T ss_dssp TTSTTSCCCSEEECCSSHHHHHHHHHHHHHTTCEEEEE-SSCCCTTCTTTCCSSSCCEEEEECTTCCC-EEEETTTTEEE
T ss_pred ccCCCCCCceEEEEcCCHHHHHHHHHHHHHCCCcEEEE-cCCcCCCCCcCCCCCcCCeEEEECcCCCC-EEECCCCCEEE
Confidence 88888999999999999999999999999999999998 899998776532 235689999999999 59999999999
Q ss_pred EeCCCCHHHHHHHHHHCCCcccccc-cccccchhhhhccCCcCCCccCCCCchhcceeEEEEEeeCCCCCCcccEEEcCC
Q 009304 80 MESGVTLRQIIGESAKAGLALPYTP-YWWGLTIGGLIGTGAHGSSLWGRGSSIHDYVVELRIVSSGGPDDGYAKVRVLNE 158 (538)
Q Consensus 80 v~aGv~l~~L~~~l~~~Gl~l~~~~-~~~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~~l~vV~~~G~~~g~~~v~~~~~ 158 (538)
||||+++.||.++|.++|+.+...+ ..+.++|||.+++|+||.... ++|..+|+|++++||++||+ |++.+.
T Consensus 123 v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~~~~gg~g~~~~-~~G~~~d~v~~~~vV~a~G~------i~~~~~ 195 (500)
T 3tsh_A 123 VDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGNFAGGGFGMLLR-KYGIAAENVIDVKLVDANGK------LHDKKS 195 (500)
T ss_dssp EETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHHHHTCCCCTTHH-HHCCGGGGEEEEEEECTTSC------EECHHH
T ss_pred EccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCccccccCCcccc-ccCChhhheeeEEEECCCce------EEECCC
Confidence 9999999999999999997765544 446789999999999998776 68999999999999999998 776654
Q ss_pred -Cccchhhhhc-CCCCeEEEEEEEEEeEecCceeE
Q 009304 159 -NDQDLDAAKV-SLGVLGVISQVTLKLQPLFKRSI 191 (538)
Q Consensus 159 -~~~~f~a~~~-s~G~lGVIt~vtl~l~p~~~~~~ 191 (538)
++++|||+++ +.|+|||||++|||++|.+....
T Consensus 196 ~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~ 230 (500)
T 3tsh_A 196 MGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVT 230 (500)
T ss_dssp HCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEE
T ss_pred CChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEE
Confidence 3456999985 56799999999999999988543
No 9
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=1.1e-30 Score=280.77 Aligned_cols=184 Identities=18% Similarity=0.149 Sum_probs=163.7
Q ss_pred CCCCCCCCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCCCccCCCCcEEEEcCCCCCeeEEeCCCCEEEE
Q 009304 1 MFPDRSACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKLVCPDGQDGLLISTKYLNKIINIDTEAMTITM 80 (538)
Q Consensus 1 ~W~~~~~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~~~~~~~~gv~Idl~~ln~v~~vd~~~~~vtv 80 (538)
.|+.++.+.|..|++|+|++||+++|+.|++++++|+++ |+||++.+.+.....++++|||++||+|.++|++.++|+|
T Consensus 28 ~~n~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~-ggGh~~~g~~~~~~~~~vvIdl~~~~~i~~vd~~~~~v~v 106 (473)
T 3rja_A 28 PFNIRLPYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAK-SGGHSYASFGFGGENGHLMVQLDRMIDVISYNDKTGIAHV 106 (473)
T ss_dssp CSBTTSCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEE-SSCCCTTCGGGTSSSSCEEEECTTCCCEEEEETTTTEEEE
T ss_pred HhhcccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEE-cCCCCCCCCcccCCCCeEEEECCCCCceEEEcCCCCEEEE
Confidence 488899999999999999999999999999999999999 8999987655433456899999999998889999999999
Q ss_pred eCCCCHHHHHHHHHHCC-CcccccccccccchhhhhccCCcCCCccCCCCchhcceeEEEEEeeCCCCCCcccEEEcCCC
Q 009304 81 ESGVTLRQIIGESAKAG-LALPYTPYWWGLTIGGLIGTGAHGSSLWGRGSSIHDYVVELRIVSSGGPDDGYAKVRVLNEN 159 (538)
Q Consensus 81 ~aGv~l~~L~~~l~~~G-l~l~~~~~~~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~~l~vV~~~G~~~g~~~v~~~~~~ 159 (538)
|||+++.+|.++|.++| +++|. +..+.++|||++++|+||.... ++|.++|+|++++||+++|+ +++++++
T Consensus 107 ~aG~~~~~l~~~l~~~G~~~~p~-G~~~~vgvgG~~~ggg~G~~~~-~~G~~~D~v~~~~vV~a~G~------v~~~~~~ 178 (473)
T 3rja_A 107 EPGARLGHLATVLNDKYGRAISH-GTCPGVGISGHFAHGGFGFSSH-MHGLAVDSVVGVTVVLADGR------IVEASAT 178 (473)
T ss_dssp CTTCBHHHHHHHHHHHHSEECCC-CSCTTCBHHHHHHTCCCCTTHH-HHCCGGGGEEEEEEECTTSC------EEEEETT
T ss_pred CCCCCHHHHHHHHHHcCCEEecc-CCCCCcEeeeeccCCCCCcccc-cccchHhheeeEEEEecCCe------EEEeCCC
Confidence 99999999999999999 88876 5557799999999999998765 58999999999999999999 8887653
Q ss_pred -c-cchhhhhcCCCCeEEEEEEEEEeEecCceeEEE
Q 009304 160 -D-QDLDAAKVSLGVLGVISQVTLKLQPLFKRSITF 193 (538)
Q Consensus 160 -~-~~f~a~~~s~G~lGVIt~vtl~l~p~~~~~~~~ 193 (538)
+ ++||++++|.|.|||||++|||+.|.+.....+
T Consensus 179 ~~~dLf~a~rG~~g~~GIVt~~~l~l~p~p~~~~~~ 214 (473)
T 3rja_A 179 ENADLFWGIKGAGSNFGIVAVWKLATFPAPKVLTRF 214 (473)
T ss_dssp BSHHHHHHHHHHGGGTCEEEEEEEECEECCSCEEEE
T ss_pred CCcchhhcccCCCCceEEEEEEEEEEEeCCCceEEE
Confidence 3 459999999999999999999999998754333
No 10
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=2.5e-31 Score=286.64 Aligned_cols=181 Identities=22% Similarity=0.271 Sum_probs=160.5
Q ss_pred CCCCCCCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCCCccCCCCcEEEEcCCCCCeeEEeCCCCEEEEe
Q 009304 2 FPDRSACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKLVCPDGQDGLLISTKYLNKIINIDTEAMTITME 81 (538)
Q Consensus 2 W~~~~~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~~~~~~~~gv~Idl~~ln~v~~vd~~~~~vtv~ 81 (538)
|++...++|..|++|+|++||+++|+.|++++++|+|+ |+||++.+.+.....+|++|||++||+| ++|+++++|+||
T Consensus 38 ~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vr-GgGh~~~g~~~~~~~ggvvIdl~~m~~i-~vd~~~~~v~V~ 115 (495)
T 3fw9_A 38 FQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLR-SGGHSYEGLSYTSDTPFILIDLMNLNRV-SIDLESETAWVE 115 (495)
T ss_dssp GCSTTSCCCSEEECCCSHHHHHHHHHHHHTSSCEEEEE-SSCCCTTCTTSCCSSCEEEEECTTCCCE-EEETTTTEEEEE
T ss_pred cccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEE-CCCcCCCCccccCCCCeEEEECCCCCcE-EEeCCCCEEEEc
Confidence 78888999999999999999999999999999999999 8999998877654446899999999996 999999999999
Q ss_pred CCCCHHHHHHHHHHC--CCcccccccccccchhhhhccCCcCCCccCCCCchhcceeEEEEEeeCCCCCCcccEEEcCC-
Q 009304 82 SGVTLRQIIGESAKA--GLALPYTPYWWGLTIGGLIGTGAHGSSLWGRGSSIHDYVVELRIVSSGGPDDGYAKVRVLNE- 158 (538)
Q Consensus 82 aGv~l~~L~~~l~~~--Gl~l~~~~~~~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~~l~vV~~~G~~~g~~~v~~~~~- 158 (538)
||+++.+|.++|.++ ||++|. +..+.++|||.+++|+||.... ++|...|+|++++||+++|+ +++...
T Consensus 116 aG~~l~~l~~~l~~~g~gl~~~~-G~~~~vgigG~~~gGg~G~~~~-~~G~~~D~v~~~~vV~adG~------i~~~~~~ 187 (495)
T 3fw9_A 116 SGSTLGELYYAITESSSKLGFTA-GWCPTVGTGGHISGGGFGMMSR-KYGLAADNVVDAILIDANGA------ILDRQAM 187 (495)
T ss_dssp TTCBHHHHHHHHHHHCSSEECCC-CSCTTCBHHHHHHTCCCCTTHH-HHCCGGGGEEEEEEECTTCC------EECHHHH
T ss_pred CCCCHHHHHHHHHHhcCCceecc-CCCCCCeEeeeccCCCCccccc-CCCchhheEEEEEEEcCCCC------EEEcCCC
Confidence 999999999999999 788876 4456789999999999998876 58999999999999999999 776322
Q ss_pred Cccchhhhhc-CCCCeEEEEEEEEEeEecCceeEE
Q 009304 159 NDQDLDAAKV-SLGVLGVISQVTLKLQPLFKRSIT 192 (538)
Q Consensus 159 ~~~~f~a~~~-s~G~lGVIt~vtl~l~p~~~~~~~ 192 (538)
+.++|+++++ ++|.|||||++||++.|.++....
T Consensus 188 ~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~ 222 (495)
T 3fw9_A 188 GEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTV 222 (495)
T ss_dssp CHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEEE
T ss_pred ChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEE
Confidence 3345999998 899999999999999999885443
No 11
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=100.00 E-value=2.4e-31 Score=289.65 Aligned_cols=200 Identities=21% Similarity=0.263 Sum_probs=166.7
Q ss_pred CCCCCCCCCcCEEEeCCCHHHHHHHHHHHHH-cCCceEEEeCCCCCCCCCCccCCCCcEEEEcCCCCCeeEEeC-----C
Q 009304 1 MFPDRSACKAADVAYPTSEQEIISVVSAATI-AKRKMKVATRFSHSIPKLVCPDGQDGLLISTKYLNKIINIDT-----E 74 (538)
Q Consensus 1 ~W~~~~~~~p~~v~~P~s~~el~~~v~~a~~-~~~~v~v~~ggghS~~~~~~~~~~~gv~Idl~~ln~v~~vd~-----~ 74 (538)
+|++.....|..|++|+|++||+++|+.|++ ++++|.++ |+|||+.+.+.+. +|++|||++||+| ++|+ +
T Consensus 53 d~~~~~~~~P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~-GgGts~~g~~~~~--~gvvidl~~m~~i-~i~~~~~~~~ 128 (524)
T 2exr_A 53 DFGGMNCVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAAR-GNGHSINGQAMAE--GGLVVDMSTTAEN-HFEVGYLSGG 128 (524)
T ss_dssp CTTCCCCCCCSEEEECSSHHHHHHHHHHHHHSSSCCEEEE-SSSCCSSSTTCCT--TSEEEEGGGGTTS-CEEEEECCSS
T ss_pred cccccccCCCCEEEecCCHHHHHHHHHHHHhhcCceEEEE-CCCcCCCCcccCC--CEEEEECcCCCCc-EEeecccCCC
Confidence 4777778899999999999999999999996 99999998 8999988776652 5899999999998 7777 5
Q ss_pred C--CEEEEeCCCCHHHHHH-HHHHCCCcccccccccccchhhhhccCCcCCCccCCCCchhcceeEEEEEeeCCCCCCcc
Q 009304 75 A--MTITMESGVTLRQIIG-ESAKAGLALPYTPYWWGLTIGGLIGTGAHGSSLWGRGSSIHDYVVELRIVSSGGPDDGYA 151 (538)
Q Consensus 75 ~--~~vtv~aGv~l~~L~~-~l~~~Gl~l~~~~~~~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~~l~vV~~~G~~~g~~ 151 (538)
. .+|+||||+++.++.+ .++++|+.++..++++.+||||++++|++|.... +||.+.|+|+++++|+++|+
T Consensus 129 ~~~~~v~v~aGv~~~~l~~~~l~~~Gl~~~~~~s~~~~tiGG~va~ng~G~~~~-~yG~~~d~V~~l~vV~~dG~----- 202 (524)
T 2exr_A 129 DATAFVDVSGGALWEDVLKRCVSEYGLAPRSWTDYLGLTVGGTLSNAGVSGQAF-RYGPQTSNVTELDVVTGNGD----- 202 (524)
T ss_dssp SSSEEEEEETTCBHHHHHHHHHHHHSEECSCCCSCCSSBHHHHHTTCCCCTTHH-HHCCGGGSEEEEEEEETTSC-----
T ss_pred CCceEEEEeCCcCHHHHHHHHHHHcCCCCCCCCcCCceeecccCCCCCCccccc-ccCcHhhhEEEEEEEecCCe-----
Confidence 5 8999999999999855 4569999966666677799999999998776554 47999999999999999999
Q ss_pred cEEEcCC-Ccc-chhhhhcCCCCeEEEEEEEEEeEecCceeE--EEEecCchhHHHHHhhhccc
Q 009304 152 KVRVLNE-NDQ-DLDAAKVSLGVLGVISQVTLKLQPLFKRSI--TFLMKNDSELGDEAGSFGHQ 211 (538)
Q Consensus 152 ~v~~~~~-~~~-~f~a~~~s~G~lGVIt~vtl~l~p~~~~~~--~~~~~~~~~~~~~~~~~~~~ 211 (538)
+++++. .++ +|++++||+|+|||||++||++.|.++... ...+.+.++..+.+..+++.
T Consensus 203 -v~~~~~~~~~dL~~~~~Gs~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~~~~~~~~l~~~ 265 (524)
T 2exr_A 203 -VVTCSEIENSELFFSVLGGLGQFGIITRARVLLQPAPDMVRWIRVVYTEFDEFTQDAEWLVSQ 265 (524)
T ss_dssp -EEEEESSSSHHHHHHHTTCTTSSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHHHHHHTS
T ss_pred -EEEECCCCChhHHhHhhcCCCccEEEEEEEEEEEEcCCeeEEEEEEeCCHHHHHHHHHHHHHc
Confidence 887765 334 599999999999999999999999998543 33445556666666655543
No 12
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=8.6e-31 Score=286.34 Aligned_cols=198 Identities=18% Similarity=0.302 Sum_probs=169.6
Q ss_pred CCCCCCCCCcCEEEeCCCHHHHHHHHHHHHH--c-CCceEEEeCCCCCCCCCCccCCCCcEEEEcCCCCCe-----eEEe
Q 009304 1 MFPDRSACKAADVAYPTSEQEIISVVSAATI--A-KRKMKVATRFSHSIPKLVCPDGQDGLLISTKYLNKI-----INID 72 (538)
Q Consensus 1 ~W~~~~~~~p~~v~~P~s~~el~~~v~~a~~--~-~~~v~v~~ggghS~~~~~~~~~~~gv~Idl~~ln~v-----~~vd 72 (538)
+|++.....|..|++|+|++||+++|+.|++ + +++|.++ |+|||+.+.+.+ .+|++|||++||+| +++|
T Consensus 60 d~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~~v~~~-G~G~~~~g~~~~--~~gvvi~l~~m~~i~~~~~~~~d 136 (534)
T 1w1o_A 60 DFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYTIAFR-GRGHSLMGQAFA--PGGVVVNMASLGDAAAPPRINVS 136 (534)
T ss_dssp CTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCCEEEE-SSCCCSSSTTCC--TTSEEEEGGGGGCSSSSCSEEEC
T ss_pred cccccccCCCCEEEecCCHHHHHHHHHHHHhcCCCCceEEEE-CCCCCCCCCcCC--CCeEEEECccccccccCccEEEc
Confidence 5887788899999999999999999999998 6 8999998 899998876654 26899999999998 8999
Q ss_pred CCCCEEEEeCCCCHHHHHHHHHHCCCcccccccccccchhhhhccCCcCCCccCCCCchhcceeEEEEEeeCCCCCCccc
Q 009304 73 TEAMTITMESGVTLRQIIGESAKAGLALPYTPYWWGLTIGGLIGTGAHGSSLWGRGSSIHDYVVELRIVSSGGPDDGYAK 152 (538)
Q Consensus 73 ~~~~~vtv~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~~l~vV~~~G~~~g~~~ 152 (538)
+++++|+||||+++.+|.+++.++|++++..++...+||||++++|++|.... +||.++|+|++++||+++|+
T Consensus 137 ~~~~~v~v~aGv~~~~l~~~~~~~Gl~~~~~~~~~~~tvGG~v~~~g~g~~~~-~yG~~~d~v~~~evV~~dG~------ 209 (534)
T 1w1o_A 137 ADGRYVDAGGEQVWIDVLRASLARGVAPRSWTDYLYLTVGGTLSNAGISGQAF-RHGPQISNVLEMDVITGHGE------ 209 (534)
T ss_dssp TTSSEEEEETTCBHHHHHHHHHTTTEEESCCCSSCCSBHHHHHTTCCCSTTHH-HHCCGGGSEEEEEEEETTSC------
T ss_pred CCCCEEEECCCcCHHHHHHHHHHCCCcccCCCCCCCEEeceeccCCCcccccc-ccccHhhhEEEEEEEeCCcc------
Confidence 99999999999999999999999999877777777899999999999887665 58899999999999999999
Q ss_pred EEEcCCC-c-cchhhhhcCCCCeEEEEEEEEEeEecCceeEE--EEecCchhHHHHHhhh
Q 009304 153 VRVLNEN-D-QDLDAAKVSLGVLGVISQVTLKLQPLFKRSIT--FLMKNDSELGDEAGSF 208 (538)
Q Consensus 153 v~~~~~~-~-~~f~a~~~s~G~lGVIt~vtl~l~p~~~~~~~--~~~~~~~~~~~~~~~~ 208 (538)
+++++.. + ++|++++||.|+|||||++||++.|.++.... ..+.+..++.+.+..+
T Consensus 210 v~~~~~~~~~dL~~~~rGs~G~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (534)
T 1w1o_A 210 MVTCSKQLNADLFDAVLGGLGQFGVITRARIAVEPAPARARWVRFVYTDFAAFSADQERL 269 (534)
T ss_dssp EEEEESSSSHHHHHHHTTCTTCSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHHHHH
T ss_pred EEEECCCCChhhHhhhcCCCCCcEEEEEEEEEEEECCcceEEEEEEeCCHHHHHHHHHHH
Confidence 8887763 3 45999999999999999999999999985432 3344444544444433
No 13
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=100.00 E-value=4.5e-31 Score=290.07 Aligned_cols=199 Identities=19% Similarity=0.206 Sum_probs=166.9
Q ss_pred CCCCCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCCCccCC--CCcEEEEcCCCCCeeEEeCCCCEEEEe
Q 009304 4 DRSACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKLVCPDG--QDGLLISTKYLNKIINIDTEAMTITME 81 (538)
Q Consensus 4 ~~~~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~~~~~~--~~gv~Idl~~ln~v~~vd~~~~~vtv~ 81 (538)
+.....|..|++|+|++||+++|+.|++++++|.++ |+|||+.+.+.+.. .++++|||++||+|+++|+++++|+||
T Consensus 132 g~~~~~p~~vv~P~s~eeV~~iv~~a~~~~~pv~~~-GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~ 210 (584)
T 2uuu_A 132 GQVKNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPM-GGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQ 210 (584)
T ss_dssp TCCCCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEE-SSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEE
T ss_pred CccCCCCCEEEeCCCHHHHHHHHHHHHHcCCeEEEE-eCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEEC
Confidence 445678999999999999999999999999999998 89999887766532 467999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHCCCccccccc-ccccchhhhhccCCcCCCccCCCCchhcceeEEEEEeeCCCCCCcccEEE--c--
Q 009304 82 SGVTLRQIIGESAKAGLALPYTPY-WWGLTIGGLIGTGAHGSSLWGRGSSIHDYVVELRIVSSGGPDDGYAKVRV--L-- 156 (538)
Q Consensus 82 aGv~l~~L~~~l~~~Gl~l~~~~~-~~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~~l~vV~~~G~~~g~~~v~~--~-- 156 (538)
||+++.+|.++|.++|+.+|..|+ ....||||++++|++|.... +||.++|+|+++++|+++|+ +++ .
T Consensus 211 aGv~~~~l~~~l~~~Gl~~~~~p~s~~~~tvGG~ia~na~G~~~~-~yG~~~d~V~~levVl~dG~------i~~~~~~~ 283 (584)
T 2uuu_A 211 VGIMGPELEKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQSD-KYGDIEDMAVSFRTVTPTGT------LELRNGAR 283 (584)
T ss_dssp TTCBHHHHHHHHHHTTEECCCCCTTGGGCBHHHHHHHTCCCTTHH-HHCCHHHHEEEEEEEETTEE------ECCC----
T ss_pred CCCcHHHHHHHHHHcCCeeCcCCCccCCeeEeeeccCCCCccccc-CcCcHHHheeeEEEEeCCCC------EEECCccc
Confidence 999999999999999999999886 46689999999999998776 47999999999999999998 443 1
Q ss_pred -CCCccchhhhhcCCCCeEEEEEEEEEeEecCceeE--EEEecCchhHHHHHhhhcc
Q 009304 157 -NENDQDLDAAKVSLGVLGVISQVTLKLQPLFKRSI--TFLMKNDSELGDEAGSFGH 210 (538)
Q Consensus 157 -~~~~~~f~a~~~s~G~lGVIt~vtl~l~p~~~~~~--~~~~~~~~~~~~~~~~~~~ 210 (538)
+.+.++++++++|.|+|||||++||++.|.++... .+.+.+.++..+.+.++.+
T Consensus 284 ~~~g~dl~~~~~GseGtlGIIT~~tlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~~ 340 (584)
T 2uuu_A 284 SGAGINYKHIILGSEGTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSALQQIRS 340 (584)
T ss_dssp ---CCCTHHHHTTCTTSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred cCCCcchhhhhccCCCCcEEEEEEEEEEEecccceEEEEEEcCCHHHHHHHHHHHHh
Confidence 12334588889999999999999999999988432 3333345556666665554
No 14
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=2.4e-30 Score=281.80 Aligned_cols=172 Identities=22% Similarity=0.231 Sum_probs=151.1
Q ss_pred CCCCCCCCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCCCccCCCCcEEEEcCCCCCeeEEeCCCCEEEE
Q 009304 1 MFPDRSACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKLVCPDGQDGLLISTKYLNKIINIDTEAMTITM 80 (538)
Q Consensus 1 ~W~~~~~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~~~~~~~~gv~Idl~~ln~v~~vd~~~~~vtv 80 (538)
+|+.+..+.|..|+.|+|++||+++|+.|++++++|.|+ |+||++.+.+.+ ..+|++|||++||+| ++|++.++|+|
T Consensus 50 ~~n~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~-ggGh~~~g~~~~-~~~gvvIdl~~l~~i-~~d~~~~~v~v 126 (530)
T 2y3s_A 50 GENLRFVGDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVR-SGGHCYEDFVAN-SDVRVVMDMSRLSAV-GFDEERGAFAV 126 (530)
T ss_dssp CSCTTCCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEE-SSCCCSSSTTTC-TTCCEEEECTTCCCE-EEETTTTEEEE
T ss_pred HhhhhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEE-CCCCCCCCCccc-CCCeEEEEcccCCCE-EEcCCCCEEEE
Confidence 588888999999999999999999999999999999999 899998776543 346899999999996 99999999999
Q ss_pred eCCCCHHHHHHHHHH-CCCcccccccccccchhhhhccCCcCCCccCCCCchhcceeEEEEEee--CCCCCCcccEEEc-
Q 009304 81 ESGVTLRQIIGESAK-AGLALPYTPYWWGLTIGGLIGTGAHGSSLWGRGSSIHDYVVELRIVSS--GGPDDGYAKVRVL- 156 (538)
Q Consensus 81 ~aGv~l~~L~~~l~~-~Gl~l~~~~~~~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~~l~vV~~--~G~~~g~~~v~~~- 156 (538)
|||++|.+|.++|.+ +|++++. +..+.++|||.+++|+||.... ++|.++|+|++++||++ +|+ ++.+
T Consensus 127 ~aG~~~~~l~~~l~~~~Gl~~~~-G~~~~vgvgG~~~gGg~g~~s~-~~G~~~D~v~~~evV~~d~~G~------i~~v~ 198 (530)
T 2y3s_A 127 EAGATLGAVYKTLFRVWGVTLPG-GACPDVGAGGHILGGGYGPLSR-MHGSIVDYLHAVEVVVVDASGD------ARTVI 198 (530)
T ss_dssp ETTCBHHHHHHHHHHHHSCCCCC-CSCTTCBHHHHHHTTCCCTTHH-HHCCGGGGEEEEEEEEECTTSC------EEEEE
T ss_pred eCCCCHHHHHHHHHhhcCeEEeC-CCCCCCCcCCCcCCCCCCcccc-cccchhhheeeEEEEEecCCCc------EEEEe
Confidence 999999999999985 9999887 5557799999999999998775 58899999999999995 498 6433
Q ss_pred -CC--Ccc---chhhhhcC-CCCeEEEEEEEEEe
Q 009304 157 -NE--NDQ---DLDAAKVS-LGVLGVISQVTLKL 183 (538)
Q Consensus 157 -~~--~~~---~f~a~~~s-~G~lGVIt~vtl~l 183 (538)
++ .++ +|||++|+ +|+|||||++|||+
T Consensus 199 ~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l 232 (530)
T 2y3s_A 199 ATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRT 232 (530)
T ss_dssp EESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECC
T ss_pred ccccccCCChHHHHHHhcCCCCCcEEEEEEEEEe
Confidence 43 222 69999985 79999999999999
No 15
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=99.97 E-value=6.7e-30 Score=276.32 Aligned_cols=181 Identities=17% Similarity=0.205 Sum_probs=157.4
Q ss_pred CCCCCCCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCCCccCCCCcEEEEcCCCCCeeEEeCCCCEEEEe
Q 009304 2 FPDRSACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKLVCPDGQDGLLISTKYLNKIINIDTEAMTITME 81 (538)
Q Consensus 2 W~~~~~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~~~~~~~~gv~Idl~~ln~v~~vd~~~~~vtv~ 81 (538)
|+.....+|..|++|+|++||+++|+.|++++++|+|+ |+||++.+.+...+.+|++|||++||+| ++|++.++|+||
T Consensus 46 w~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vr-ggGh~~~g~~~~~~~~gvvIdl~~l~~i-~vd~~~~~v~V~ 123 (518)
T 3vte_A 46 FISDTTPKPLVIVTPSNNSHIQATILCSKKVGLQIRTR-SGGHDAEGMSYISQVPFVVVDLRNMHSI-KIDVHSQTAWVE 123 (518)
T ss_dssp GCSSSSCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEE-SSCCCTTCTTTCCSSSEEEEECTTCCCE-EEETTTTEEEEE
T ss_pred cccccCCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEE-CCCcCCCCCccCCCCCeEEEECCCCcee-EEeCCCCEEEEe
Confidence 78888899999999999999999999999999999999 8999987766433456999999999996 899999999999
Q ss_pred CCCCHHHHHHHHHHCC--CcccccccccccchhhhhccCCcCCCccCCCCchhcceeEEEEEeeCCCCCCcccEEEcCCC
Q 009304 82 SGVTLRQIIGESAKAG--LALPYTPYWWGLTIGGLIGTGAHGSSLWGRGSSIHDYVVELRIVSSGGPDDGYAKVRVLNEN 159 (538)
Q Consensus 82 aGv~l~~L~~~l~~~G--l~l~~~~~~~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~~l~vV~~~G~~~g~~~v~~~~~~ 159 (538)
||+++.+|.++|.++| |+++. +..+.++|||.+++|+||.... ++|.++|+|++++||+++|+ +++.+..
T Consensus 124 aG~~l~~l~~~l~~~g~gl~~~~-G~~~~vgvgG~~~gGg~G~~s~-~~G~~~D~V~~~evV~adG~------iv~~~~~ 195 (518)
T 3vte_A 124 AGATLGEVYYWINEKNENLSFPG-GYCPTVGVGGHFSGGGYGALMR-NYGLAADNIIDAHLVNVDGK------VLDRKSM 195 (518)
T ss_dssp TTCBHHHHHHHHHHHCTTEECCC-CSCTTCBHHHHHHTCCCCTTHH-HHCCGGGGEEEEEEECTTCC------EECHHHH
T ss_pred CCccHHHHHHHHHHhCCCceecC-CCCCCeeeeeeeCCCCCccccC-CCCchhheEEEEEEEccCCe------EEEeecc
Confidence 9999999999999875 55553 3446789999999999998765 58999999999999999999 7765333
Q ss_pred c-cchhhhhcC-CCCeEEEEEEEEEeEecCceeEE
Q 009304 160 D-QDLDAAKVS-LGVLGVISQVTLKLQPLFKRSIT 192 (538)
Q Consensus 160 ~-~~f~a~~~s-~G~lGVIt~vtl~l~p~~~~~~~ 192 (538)
+ ++|+|++|| +|.|||||++|||+.|.++....
T Consensus 196 ~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~ 230 (518)
T 3vte_A 196 GEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTI 230 (518)
T ss_dssp CHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEE
T ss_pred ccchhhheecccCCCceEEEEEEEEEEeCCCeEEE
Confidence 3 459999997 99999999999999999875433
No 16
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=99.97 E-value=6.5e-30 Score=276.24 Aligned_cols=172 Identities=16% Similarity=0.190 Sum_probs=150.6
Q ss_pred CCCCCCCCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCCCccCCCCcEEEEcCCCCCeeEEeCCCCEEEE
Q 009304 1 MFPDRSACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKLVCPDGQDGLLISTKYLNKIINIDTEAMTITM 80 (538)
Q Consensus 1 ~W~~~~~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~~~~~~~~gv~Idl~~ln~v~~vd~~~~~vtv 80 (538)
+|+.+....|..|+.|+|++||+++|+.|++++++|+|+ |+||++.+.+.. .++|++|||++||+| ++|++.++|+|
T Consensus 26 ~~n~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vr-ggGh~~~g~~~~-~~~gvvIdl~~l~~i-~vd~~~~~v~v 102 (501)
T 3pop_A 26 SDNHRFVVEPEEFFLPATPDDVVASLQKAVTEGRGVACR-SGGHCGQDFVGT-PRRDLVLDLHNLHAI-GPAADGAGVRV 102 (501)
T ss_dssp CSCTTSCCCCSEEEECSSHHHHHHHHHHHHHTTCCEEEE-SSCCCSSSTTTS-SCCSEEEECTTCCCE-EECTTSSSEEE
T ss_pred HHhhccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEE-eCCccCCCcccc-CCCEEEEEecccCCe-EEcCCCCEEEE
Confidence 589999999999999999999999999999999999999 899998876643 246899999999995 89999999999
Q ss_pred eCCCCHHHHHHHHH-HCCCcccccccccccchhhhhccCCcCCCccCCCCchhcceeEEEEEe--eCCCCCCcccE--EE
Q 009304 81 ESGVTLRQIIGESA-KAGLALPYTPYWWGLTIGGLIGTGAHGSSLWGRGSSIHDYVVELRIVS--SGGPDDGYAKV--RV 155 (538)
Q Consensus 81 ~aGv~l~~L~~~l~-~~Gl~l~~~~~~~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~~l~vV~--~~G~~~g~~~v--~~ 155 (538)
|||+++.+|.++|. ++|+++|. +..+.++|||.+++|+||.... ++|.++|+|++++||+ ++|+ + ++
T Consensus 103 ~aG~~~~~l~~~l~~~~Gl~~~~-G~~~~vgvgG~~~gGg~G~~~~-~~G~~~D~v~~~evV~~da~G~------~~~v~ 174 (501)
T 3pop_A 103 GSGATVDQVQKALFRRWNAALPL-GACSAVGMGGLVAGGGYGPLSR-QLGLVVDHLHAVEVAVVDESRT------VRLVT 174 (501)
T ss_dssp ETTCBHHHHHHHHHHHHSBCCCC-CSBTTCBHHHHHHHCCCCTTHH-HHCCGGGGEEEEEEEEECTTSC------EEEEE
T ss_pred ECCcCHHHHHHHHHhhcCeEeCC-CCCCCceEeeccccCCCccccc-ccccHHHhEEEEEEEEecCCCC------EEEEE
Confidence 99999999999997 57999886 4446789999999999998765 5899999999999999 7897 4 33
Q ss_pred cC---C-Ccc-chhhhhcC-CCCeEEEEEEEEEe
Q 009304 156 LN---E-NDQ-DLDAAKVS-LGVLGVISQVTLKL 183 (538)
Q Consensus 156 ~~---~-~~~-~f~a~~~s-~G~lGVIt~vtl~l 183 (538)
.+ + .++ +|||++|| +|+|||||++|||+
T Consensus 175 ~~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~ 208 (501)
T 3pop_A 175 ARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRS 208 (501)
T ss_dssp EETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECC
T ss_pred eccCCCCCCccHHHHhhccCCCCcEEEEEEEEEe
Confidence 31 1 234 59999997 89999999999998
No 17
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=99.97 E-value=3.5e-29 Score=272.37 Aligned_cols=172 Identities=17% Similarity=0.216 Sum_probs=150.8
Q ss_pred CCCCCCCCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCCCccCCCCcEEEEcCCCCCeeEEeCCCCEEEE
Q 009304 1 MFPDRSACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKLVCPDGQDGLLISTKYLNKIINIDTEAMTITM 80 (538)
Q Consensus 1 ~W~~~~~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~~~~~~~~gv~Idl~~ln~v~~vd~~~~~vtv 80 (538)
+|+.+....|..|+.|+|++||+++|+.|+++++++.|+ |+||++.+.+.+ ..+|++|||++||+| ++|++.++|+|
T Consensus 47 ~~n~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~vr-ggGh~~~g~~~~-~~~gvvIdl~~l~~i-~~d~~~~~v~v 123 (521)
T 2ipi_A 47 GFNGRFRGRPDVVYVVHTADQVVDAVNQAMAAGQRIAVR-SGGHCFEGFVDD-PAVRAVIDMSQMRQV-FYDSGKRAFAV 123 (521)
T ss_dssp CSCTTCCCCCSEEEECSSHHHHHHHHHHHHHHTCCEEEE-SSCCCTTCGGGC-TTCCEEEECTTCCCE-EEETTTTEEEE
T ss_pred cccccccCCCCEEEEcCCHHHHHHHHHHHHHcCCeEEEE-CCCcCCCCCccc-CCCeEEEecccCCCe-EEeCCCCEEEE
Confidence 588889999999999999999999999999999999999 899998776543 346899999999996 99999999999
Q ss_pred eCCCCHHHHHHHHH-HCCCcccccccccccchhhhhccCCcCCCccCCCCchhcceeEEEEEeeC--CCCCCcccEEEc-
Q 009304 81 ESGVTLRQIIGESA-KAGLALPYTPYWWGLTIGGLIGTGAHGSSLWGRGSSIHDYVVELRIVSSG--GPDDGYAKVRVL- 156 (538)
Q Consensus 81 ~aGv~l~~L~~~l~-~~Gl~l~~~~~~~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~~l~vV~~~--G~~~g~~~v~~~- 156 (538)
|||++|.+|.++|. ++|+++|... .+.++|||++++|+||.... ++|.++|+|++++||++| |+ ++.+
T Consensus 124 ~aG~~~~~l~~~l~~~~Gl~~~~G~-~~~vgvgG~~~gGg~g~~s~-~~G~~~D~v~~~evV~~d~~G~------i~~~~ 195 (521)
T 2ipi_A 124 EPGATLGETYRALYLDWGVTIPAGV-CPQVGVGGHVLGGGYGPLSR-RDGVVADHLYAVEVVVVDASGR------ARKVV 195 (521)
T ss_dssp CTTSBHHHHHHHHHHHHSBCCCCCS-CTTCBHHHHTTTTCCCTTHH-HHCCGGGGEEEEEEEEECTTSC------EEEEE
T ss_pred eCCcCHHHHHHHHHHhcCceeCCCC-CCCcccCCcccCCCCCcccc-ccccHhhcEEEEEEEEecCCcc------EEEEe
Confidence 99999999999997 7999998743 45789999999999998775 578999999999999987 87 5432
Q ss_pred -CC--Ccc---chhhhhc-CCCCeEEEEEEEEEe
Q 009304 157 -NE--NDQ---DLDAAKV-SLGVLGVISQVTLKL 183 (538)
Q Consensus 157 -~~--~~~---~f~a~~~-s~G~lGVIt~vtl~l 183 (538)
++ +++ +|+|++| |+|+|||||++|||+
T Consensus 196 ~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l 229 (521)
T 2ipi_A 196 ATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRT 229 (521)
T ss_dssp EECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECC
T ss_pred cccccCCCCHHHHHHHhcCCCCceEEEEEEEEEe
Confidence 32 222 6999998 479999999999999
No 18
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=99.97 E-value=7.7e-29 Score=268.71 Aligned_cols=179 Identities=16% Similarity=0.167 Sum_probs=158.2
Q ss_pred CCCCCCCCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCCCccCCCCcEEEEcCCCCCeeEEeCCCCEEEE
Q 009304 1 MFPDRSACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKLVCPDGQDGLLISTKYLNKIINIDTEAMTITM 80 (538)
Q Consensus 1 ~W~~~~~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~~~~~~~~gv~Idl~~ln~v~~vd~~~~~vtv 80 (538)
.|+.+....|..|++|+|++||+++|+.|+++++++.|+ |+||++.+.+.++..++++|||++||+| ++| ++++|+|
T Consensus 34 ~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~-ggGh~~~~~~~~~~~~gvvIdl~~l~~i-~~d-~~~~v~v 110 (503)
T 1zr6_A 34 AFNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQISAK-GGGHSYGSYGFGGEDGHLMLELDRMYRV-SVD-DNNVATI 110 (503)
T ss_dssp CSBGGGCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEE-SSCCCTTCTTTTSSSSCEEEECTTCCCE-EEC-TTSCEEE
T ss_pred hhhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEE-CCCcCCCCCcccCCCCcEEEECccCCCE-EEC-CCCeEEE
Confidence 488888899999999999999999999999999999999 8999987655433346899999999997 999 8899999
Q ss_pred eCCCCHHHHHHHHHHC-CCcccccccccccchhhhhccCCcCCCccCCCCchhcceeEEEEEeeCCCCCCcccEEEcCCC
Q 009304 81 ESGVTLRQIIGESAKA-GLALPYTPYWWGLTIGGLIGTGAHGSSLWGRGSSIHDYVVELRIVSSGGPDDGYAKVRVLNEN 159 (538)
Q Consensus 81 ~aGv~l~~L~~~l~~~-Gl~l~~~~~~~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~~l~vV~~~G~~~g~~~v~~~~~~ 159 (538)
|||+++.+|.++|.++ |+++|. +..+.++|||.+.+|+||.... ++|.++|+|++++||+++|+ ++++++.
T Consensus 111 ~aG~~~~~l~~~l~~~~gl~~~~-G~~~~vgvgG~~~gGg~g~~s~-~~G~~~D~v~~~~vV~a~G~------i~~~~~~ 182 (503)
T 1zr6_A 111 QGGARLGYTALELLDQGNRALSH-GTCPAVGVGGHVLGGGYGFATH-THGLTLDWLIGATVVLADAS------IVHVSET 182 (503)
T ss_dssp ETTCBHHHHHHHHHHTTSEECCC-CSCTTSBHHHHHHHCCCSTTHH-HHCCGGGGEEEEEEECTTSC------EEEEBTT
T ss_pred ecCCCHHHHHHHHHHcCCEEeCC-CCCCcCchhhhhcCCCCCcccc-cccChhheEEEEEEEecCCC------EEEeCCC
Confidence 9999999999999666 488886 4456789999999999998775 57899999999999999999 8888763
Q ss_pred -cc-chhhhhcCCCCeEEEEEEEEEeEecCcee
Q 009304 160 -DQ-DLDAAKVSLGVLGVISQVTLKLQPLFKRS 190 (538)
Q Consensus 160 -~~-~f~a~~~s~G~lGVIt~vtl~l~p~~~~~ 190 (538)
++ +|++++||.|.|||||++|||+.|.+...
T Consensus 183 ~~~dL~~a~rG~~g~~GIVt~~~l~l~p~~~~~ 215 (503)
T 1zr6_A 183 ENADLFWALRGGGGGFAIVSEFEFNTFEAPEII 215 (503)
T ss_dssp BSHHHHHHHTTCCSSSCEEEEEEECCEECCSCE
T ss_pred CCccHHHHHhccCCCcEEEEEEEEEEEecCcee
Confidence 34 59999999999999999999999998743
No 19
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=99.97 E-value=3.2e-29 Score=272.71 Aligned_cols=177 Identities=20% Similarity=0.240 Sum_probs=154.8
Q ss_pred CCCCCCCCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCCCccCCCCcEEEEcCCCCCeeEEeCCCCEEEE
Q 009304 1 MFPDRSACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKLVCPDGQDGLLISTKYLNKIINIDTEAMTITM 80 (538)
Q Consensus 1 ~W~~~~~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~~~~~~~~gv~Idl~~ln~v~~vd~~~~~vtv 80 (538)
+|+.+....|..|++|+|++||+++|+.|++++++|.|+ |+||++.+.+.. ..++++|||++||+| ++|++.++|+|
T Consensus 49 ~~n~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~-ggGh~~~g~~~~-~~~gvvIdl~~m~~i-~~d~~~~~v~v 125 (523)
T 2wdx_A 49 GANSRFNGEPDYIHLVGSTQQVADAVEETVRTGKRVAVR-SGGHCFEDFVDN-PDVKVIIDMSLLTEI-AYDPSMNAFLI 125 (523)
T ss_dssp SSCTTCCCCCSEEEECSSHHHHHHHHHHHHHHTCCEEEE-SSCCCSSSSSSS-TTCCEEEECTTCCCE-EEETTTTEEEE
T ss_pred hhhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEE-cCCCCCCCCccC-CCCeEEEEcccCCCE-EEcCCCCEEEE
Confidence 588888899999999999999999999999999999999 899998776543 346899999999996 99999999999
Q ss_pred eCCCCHHHHHHHHH-HCCCcccccccccccchhhhhccCCcCCCccCCCCchhcceeEEEEEeeC--CCCCCcccEEEc-
Q 009304 81 ESGVTLRQIIGESA-KAGLALPYTPYWWGLTIGGLIGTGAHGSSLWGRGSSIHDYVVELRIVSSG--GPDDGYAKVRVL- 156 (538)
Q Consensus 81 ~aGv~l~~L~~~l~-~~Gl~l~~~~~~~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~~l~vV~~~--G~~~g~~~v~~~- 156 (538)
|||++|.+|.++|. ++|+.++. +..+.++|||.+++|+||.... ++|.++|+|++++||++| |+ ++.+
T Consensus 126 ~aG~~~~~l~~~l~~~~Gl~~~~-G~~~~vgvgG~~~gGg~g~~s~-~~G~~~D~v~~~evV~~d~~G~------v~~~~ 197 (523)
T 2wdx_A 126 EPGNTLSEVYEKLYLGWNVTIPG-GVCGGVGVGGHICGGGYGPLSR-QFGSVVDYLYAVEVVVVNKQGK------ARVIV 197 (523)
T ss_dssp CTTCBHHHHHHHHHHHHSCCCCC-CCCTTCBHHHHHHHTCCCTTHH-HHCCGGGGEEEEEEEEECTTSC------EEEEE
T ss_pred cCCCCHHHHHHHHHHhcCeEEcc-CCCCCCeeCccccCCCCCcccc-cccChhheEEEEEEEEecCCcc------EEEEe
Confidence 99999999999998 59999887 5556789999999999998775 588999999999999965 87 6433
Q ss_pred -CC--Ccc---chhhhhc-CCCCeEEEEEEEEEe-----------EecCc
Q 009304 157 -NE--NDQ---DLDAAKV-SLGVLGVISQVTLKL-----------QPLFK 188 (538)
Q Consensus 157 -~~--~~~---~f~a~~~-s~G~lGVIt~vtl~l-----------~p~~~ 188 (538)
++ +++ +|||++| ++|+|||||++|||+ .|.+.
T Consensus 198 ~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~~ 247 (523)
T 2wdx_A 198 ATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKPP 247 (523)
T ss_dssp EESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCCC
T ss_pred cccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCCCc
Confidence 33 222 6999996 679999999999999 88765
No 20
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.96 E-value=2.3e-27 Score=260.36 Aligned_cols=175 Identities=14% Similarity=0.126 Sum_probs=146.8
Q ss_pred CCCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCC-CCCccCCCCcEEEEc-CCCCCeeEEeCCCCEEEEeCC
Q 009304 6 SACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIP-KLVCPDGQDGLLIST-KYLNKIINIDTEAMTITMESG 83 (538)
Q Consensus 6 ~~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~-~~~~~~~~~gv~Idl-~~ln~v~~vd~~~~~vtv~aG 83 (538)
....|.+|++|+|++||+++|+.|++++++|.++ |+||+.. +.+.+...+|++||| ++||+|+++|+++++|+||||
T Consensus 67 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~-g~Gt~~~~gg~~p~~~~gvvidl~~~mn~il~id~~~~~v~v~aG 145 (560)
T 1e8g_A 67 DYFLASAIVAPRNVADVQSIVGLANKFSFPLWPI-SIGRNSGYGGAAPRVSGSVVLDMGKNMNRVLEVNVEGAYCVVEPG 145 (560)
T ss_dssp TSSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEE-SSCCCTTTTTTCCSSTTCEEEECTTTCCCEEEEETTTTEEEECTT
T ss_pred cccCCcEEEeCCCHHHHHHHHHHHHHcCCcEEEe-cCCCcCCcCCCCCCcCCEEEEEchHhcCCeEEEcCCCCEEEEeCC
Confidence 5678999999999999999999999999999998 7888865 554432346999999 999999999999999999999
Q ss_pred CCHHHHHHHHHHCCCc--ccccccc-cccchhhhhccCCcCCCccCCCCchhcceeEEEEEeeCCCCCCcccEEEcCC--
Q 009304 84 VTLRQIIGESAKAGLA--LPYTPYW-WGLTIGGLIGTGAHGSSLWGRGSSIHDYVVELRIVSSGGPDDGYAKVRVLNE-- 158 (538)
Q Consensus 84 v~l~~L~~~l~~~Gl~--l~~~~~~-~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~~l~vV~~~G~~~g~~~v~~~~~-- 158 (538)
+++.+|.++|.++|+. +|..|.. ...||||++++|+.|.+ ++|...|+|+++++|++||+ +++++.
T Consensus 146 v~~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~~g~g~~---~yG~~~d~v~~l~vVl~dG~------v~~~~~~~ 216 (560)
T 1e8g_A 146 VTYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVERGVGYT---PYGDHWMMHSGMEVVLANGE------LLRTGMGA 216 (560)
T ss_dssp CBHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHTTCBCSS---TTCBTGGGEEEEEEEETTSC------EEECGGGG
T ss_pred CCHHHHHHHHHHcCCccccCCCCCCCCccchhhhccCCCCCcc---cceeHHHheeeeEEEeCCCC------EEEecCcc
Confidence 9999999999999999 7665433 35799999999887765 58999999999999999999 777653
Q ss_pred -Cc----------------cchhhh-hc----------CCCCeEEEEEEEEEeEecCcee
Q 009304 159 -ND----------------QDLDAA-KV----------SLGVLGVISQVTLKLQPLFKRS 190 (538)
Q Consensus 159 -~~----------------~~f~a~-~~----------s~G~lGVIt~vtl~l~p~~~~~ 190 (538)
.+ ..++++ ++ +.|+|||||++||++.|.++..
T Consensus 217 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiIt~~tl~l~p~p~~~ 276 (560)
T 1e8g_A 217 LPDPKRPETMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIWLMPNPGGY 276 (560)
T ss_dssp SCCCCCGGGTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEEEEECEECCSCE
T ss_pred cCcccccccccchhhhhhhhcccccccccCCcchhcccccCcEEEEEEEEEEEEeCCCce
Confidence 12 333333 22 3489999999999999998853
No 21
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=99.94 E-value=3.9e-26 Score=248.78 Aligned_cols=188 Identities=16% Similarity=0.124 Sum_probs=155.2
Q ss_pred CCCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCC-CCCccCCCCcEEEEcCCCCCeeEEeCCCCEEEEeCCC
Q 009304 6 SACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIP-KLVCPDGQDGLLISTKYLNKIINIDTEAMTITMESGV 84 (538)
Q Consensus 6 ~~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~-~~~~~~~~~gv~Idl~~ln~v~~vd~~~~~vtv~aGv 84 (538)
....|..|++|+|++||+++|+.|++++++|.++ |+||+.. +.+.+...+|++|||++||+|+++|+++++|+||||+
T Consensus 53 ~~~~p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~-g~G~~~~~g~~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aGv 131 (520)
T 1wvf_A 53 AAHAPSAAVTATTVEQVQGVVKICNEHKIPIWTI-STGRNFGYGSAAPVQRGQVILDLKKMNKIIKIDPEMCYALVEPGV 131 (520)
T ss_dssp GGGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEE-SSCCCTTTTTTSCSSTTCEEEECTTCCCEEEEETTTTEEEECTTC
T ss_pred cCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEE-cCCCCCCCCCCCCCCCCeEEEECCCCCceEEECCCCCEEEECCCC
Confidence 5678999999999999999999999999999999 8888875 5544323569999999999999999999999999999
Q ss_pred CHHHHHHHHHHCCCccccc--ccccccchhhhhccCCcCCCccCCCCchhcceeEEEEEeeCCCCCCcccEEEcCC---C
Q 009304 85 TLRQIIGESAKAGLALPYT--PYWWGLTIGGLIGTGAHGSSLWGRGSSIHDYVVELRIVSSGGPDDGYAKVRVLNE---N 159 (538)
Q Consensus 85 ~l~~L~~~l~~~Gl~l~~~--~~~~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~~l~vV~~~G~~~g~~~v~~~~~---~ 159 (538)
++.+|.++|.++|+.++.. |.....||||++++|++|.+ +||.+.|+|+++++|++||+ +++++. .
T Consensus 132 ~~~~l~~~l~~~Gl~~~~~~~p~~~~~~igG~~~~~g~g~~---~yG~~~d~v~~~evV~~dG~------v~~~~~~~~~ 202 (520)
T 1wvf_A 132 TFGQMYDYIQENNLPVMLSFSAPSAIAGPVGNTMDRGVGYT---PYGEHFMMQCGMEVVLANGD------VYRTGMGGVP 202 (520)
T ss_dssp CHHHHHHHHHHTTCSEECCCCSSCTTCCHHHHHHTTCBCSS---TTCBGGGGEEEEEEECTTSC------EEECGGGGST
T ss_pred CHHHHHHHHHHcCCcccCCCCCCCCeeeeeecccCCCcCCc---cccchhhcEeeeEEEcCCCc------EEEeCCCcCC
Confidence 9999999999999998765 55456899999998887765 48899999999999999999 887753 2
Q ss_pred ccc-hhhhhcCCC----------CeEEEEEEEEEeEecCceeEE-EEecC-chhHHH
Q 009304 160 DQD-LDAAKVSLG----------VLGVISQVTLKLQPLFKRSIT-FLMKN-DSELGD 203 (538)
Q Consensus 160 ~~~-f~a~~~s~G----------~lGVIt~vtl~l~p~~~~~~~-~~~~~-~~~~~~ 203 (538)
+++ |++.+++.| +|||||++||++.|.++...+ ...++ .+++.+
T Consensus 203 ~~~l~~~~~~~~Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~~f~~~~~~~~ 259 (520)
T 1wvf_A 203 GSNTWQIFKWGYGPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFEDEADIVE 259 (520)
T ss_dssp TCSCTTTCSCCSSCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEEEECCGGGHHH
T ss_pred CchhHhhhcCCCCcchhhhccCCceEEEEEEEEEEEecCCeEEEEEEEeCCHHHHHH
Confidence 344 555556654 899999999999999986432 33333 345433
No 22
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.94 E-value=1.1e-26 Score=253.87 Aligned_cols=197 Identities=18% Similarity=0.139 Sum_probs=160.0
Q ss_pred CCCCCCCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCCCccCCC----CcEEEEcCCCCCeeEEeCCCCE
Q 009304 2 FPDRSACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKLVCPDGQ----DGLLISTKYLNKIINIDTEAMT 77 (538)
Q Consensus 2 W~~~~~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~~~~~~~----~gv~Idl~~ln~v~~vd~~~~~ 77 (538)
|+ .....|.+|++|+|++||+++|+.|++++++|.+. |+|||+.+.+.+... ++++|||++||+|+++|+ .++
T Consensus 39 ~~-~~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~-GgGt~~~G~~~~~~~~~~r~gvvIdl~rmn~I~~id~-~~~ 115 (571)
T 1f0x_A 39 FR-SGQGDALAVVFPGSLLELWRVLKACVTADKIILMQ-AANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLGK-GEQ 115 (571)
T ss_dssp SS-SCBBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEE-SSCCCSSSTTSCCBSCCSSCEEEEECTTCCCEEEETT-TTE
T ss_pred cc-ccCCCccEEEeeCCHHHHHHHHHHHHHcCCCEEEE-CCCcCCCCCccCCCcCCcCceEEEECcccCCceeECC-CCe
Confidence 54 45778999999999999999999999999999998 899998888776432 389999999999999995 579
Q ss_pred EEEeCCCCHHHHHHHHHHCCCcccccccc--cccchhhhhccCCcCCCccCCCCchhc----------------ceeEEE
Q 009304 78 ITMESGVTLRQIIGESAKAGLALPYTPYW--WGLTIGGLIGTGAHGSSLWGRGSSIHD----------------YVVELR 139 (538)
Q Consensus 78 vtv~aGv~l~~L~~~l~~~Gl~l~~~~~~--~~~tvGG~i~tg~hGs~~~~~~G~~~d----------------~V~~l~ 139 (538)
|+||||+++.+|.++|.++|+.+|..++. ...||||++++|+||.... +||.+.| +|++++
T Consensus 116 v~v~aGv~l~~L~~~l~~~Gl~~p~~~g~s~~~~tvGG~ia~nagG~~~~-~yG~~~d~~~~~~~~~~~~l~~~~vl~le 194 (571)
T 1f0x_A 116 VLAYPGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQ-RGPAYTEMSLFARINEDGKLTLVNHLGID 194 (571)
T ss_dssp EEECTTCBHHHHHHHHGGGTEECSCCCGGGGGTCBHHHHHHTTCCCSCTT-SCSSCCSCEEEEEECTTSCEEEEECSSBC
T ss_pred EEEcCCcCHHHHHHHHHhcCccCCcCCCccCCCceecccccCCCCccccc-CCCchhhhhhhheeccCCceEEEEeeeEE
Confidence 99999999999999999999988776643 3579999999999998776 6899999 999999
Q ss_pred EEeeCCCCCCcccEEEcC-------------------CCc-----------------cchhhh--hcCCCCeEEEEEEEE
Q 009304 140 IVSSGGPDDGYAKVRVLN-------------------END-----------------QDLDAA--KVSLGVLGVISQVTL 181 (538)
Q Consensus 140 vV~~~G~~~g~~~v~~~~-------------------~~~-----------------~~f~a~--~~s~G~lGVIt~vtl 181 (538)
+|+++|+ +++.+ .+. ++++++ +||+|+||| |++||
T Consensus 195 vVl~dG~------i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~Dl~~l~~a~GseGtlGV-t~~tl 267 (571)
T 1f0x_A 195 LGETPEQ------ILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCAGKLAV-FAVRL 267 (571)
T ss_dssp CCSSHHH------HHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTTCGGGCCSSTTCTTSSEE-EEEEE
T ss_pred EEcCCCc------EEEecCccccccchhhhcccccccCCcccccccccccccccccccHHHHHHhcCCCCceeE-EEEEE
Confidence 9999998 32211 112 335555 899999999 99999
Q ss_pred EeEecCceeEE-EEec-CchhHHHHHhhhc
Q 009304 182 KLQPLFKRSIT-FLMK-NDSELGDEAGSFG 209 (538)
Q Consensus 182 ~l~p~~~~~~~-~~~~-~~~~~~~~~~~~~ 209 (538)
++.|.++.... +... +.+++.+.+.++.
T Consensus 268 ~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~ 297 (571)
T 1f0x_A 268 DTFEAEKNQQVFYIGTNQPEVLTEIRRHIL 297 (571)
T ss_dssp ECEECCSSCEEEEEEESCHHHHHHHHHHHH
T ss_pred EEEecCCeEEEEEEEeCCHHHHHHHHHHHH
Confidence 99999885432 3333 3445555555554
No 23
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.88 E-value=2e-22 Score=206.54 Aligned_cols=161 Identities=19% Similarity=0.167 Sum_probs=131.5
Q ss_pred CCCCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCCCccCCCCcEEEEcCCCCCeeEEeCCCCEEEEeCCC
Q 009304 5 RSACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKLVCPDGQDGLLISTKYLNKIINIDTEAMTITMESGV 84 (538)
Q Consensus 5 ~~~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~~~~~~~~gv~Idl~~ln~v~~vd~~~~~vtv~aGv 84 (538)
++...|..+++|+|++||+++|+.|++++.++.++ |+||++.....+ .++++|||++||+| ++|. ++++||||+
T Consensus 44 ~~~~~p~~vv~P~s~eev~~~l~~a~~~~~pv~~~-GgGtnl~~~~~~--~~gvvI~l~~m~~i-~id~--~~v~v~aGv 117 (326)
T 1hsk_A 44 KTGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYL-GNGSNIIIREGG--IRGIVISLLSLDHI-EVSD--DAIIAGSGA 117 (326)
T ss_dssp SCCCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEE-SSCSSEEECTTC--EEEEEEECTTCCCE-EEET--TEEEEETTS
T ss_pred CcCCcceEEEEcCCHHHHHHHHHHHHHcCCCEEEE-CCCCccccCCCC--CCeEEEEeCCCCce-EEcC--CEEEEeCCC
Confidence 46678999999999999999999999999999999 889986533221 14899999999997 8884 799999999
Q ss_pred CHHHHHHHHHHCCCc-ccccccccccchhhhhccCCcCCCccCCCCchhcceeEEEEEeeCCCCCCcccEEEcCCCccch
Q 009304 85 TLRQIIGESAKAGLA-LPYTPYWWGLTIGGLIGTGAHGSSLWGRGSSIHDYVVELRIVSSGGPDDGYAKVRVLNENDQDL 163 (538)
Q Consensus 85 ~l~~L~~~l~~~Gl~-l~~~~~~~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~~l~vV~~~G~~~g~~~v~~~~~~~~~f 163 (538)
+|.+|.+++.++|+. |...+.+++ ||||++++|++| ++|.++|+|+++++|+++|+ +++++.. +.+
T Consensus 118 ~~~~l~~~l~~~Gl~gLe~~~~~Pg-tvGG~i~~nagg-----yG~~~~d~v~~v~vv~~~G~------i~~~~~~-~~~ 184 (326)
T 1hsk_A 118 AIIDVSRVARDYALTGLEFACGIPG-SIGGAVYMNAGA-----YGGEVKDCIDYALCVNEQGS------LIKLTTK-ELE 184 (326)
T ss_dssp BHHHHHHHHHHTTEESCGGGTTCCS-BHHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSC------EEEEETT-TTT
T ss_pred cHHHHHHHHHHCCCccccccCCCcc-hhhHHHhccccc-----CchhhhhhEEEEEEEeCCCC------EEEEChH-HcC
Confidence 999999999999992 333333333 999999999988 23499999999999999998 8887654 222
Q ss_pred hhhh----cCCCCeEEEEEEEEEeEec
Q 009304 164 DAAK----VSLGVLGVISQVTLKLQPL 186 (538)
Q Consensus 164 ~a~~----~s~G~lGVIt~vtl~l~p~ 186 (538)
++.+ .+.| ||||++||++.|.
T Consensus 185 ~gyr~~~l~s~g--gIIt~~~l~l~p~ 209 (326)
T 1hsk_A 185 LDYRNSIIQKEH--LVVLEAAFTLAPG 209 (326)
T ss_dssp CBTTBCHHHHTT--CEEEEEEEECEEC
T ss_pred CCccccccCCCC--EEEEEEEEEEEcC
Confidence 2222 2456 9999999999998
No 24
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.86 E-value=2.1e-21 Score=198.00 Aligned_cols=165 Identities=18% Similarity=0.186 Sum_probs=133.4
Q ss_pred CCCCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCCCccCCCCcEEEEcCCCCCeeEEeCCCCEEEEeCCC
Q 009304 5 RSACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKLVCPDGQDGLLISTKYLNKIINIDTEAMTITMESGV 84 (538)
Q Consensus 5 ~~~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~~~~~~~~gv~Idl~~ln~v~~vd~~~~~vtv~aGv 84 (538)
++.+.|..++.|+|++||+++|+.|+++++++.++ |+||++.... .+.+|++|||++||+|. +|. .+|+|+||+
T Consensus 50 ~igg~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~-GgGsnl~~~~--~~~~gvvI~l~~~~~I~-~d~--~~v~v~aG~ 123 (322)
T 3tx1_A 50 KTGGAADVFVMPKTIEEAQEVVAYCHQNKIPLTIL-GNGSNLIIKD--GGIRGVILHLDLLQTIE-RNN--TQIVAMSGA 123 (322)
T ss_dssp SCCCEEEEEEECSSHHHHHHHHHHHHHTTCCEEEE-SCCTTEEECT--TCEEEEEEECTTCCCEE-EET--TEEEEETTS
T ss_pred CcCceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEE-CCccCCCcCC--CCCCeEEEECCCCCcEE-ECC--CEEEEecCc
Confidence 46778999999999999999999999999999999 8888754211 12358999999999964 764 599999999
Q ss_pred CHHHHHHHHHHCCCc-ccccccccccchhhhhccCCcCCCccCCCCchhcceeEEEEEeeCCCCCCcccEEEcCCCccch
Q 009304 85 TLRQIIGESAKAGLA-LPYTPYWWGLTIGGLIGTGAHGSSLWGRGSSIHDYVVELRIVSSGGPDDGYAKVRVLNENDQDL 163 (538)
Q Consensus 85 ~l~~L~~~l~~~Gl~-l~~~~~~~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~~l~vV~~~G~~~g~~~v~~~~~~~~~f 163 (538)
+|.+|.+++.++|++ +.....++ .||||++++|++| ++|.++|+|+++++|+++|+ +++++.+ +.+
T Consensus 124 ~~~~l~~~l~~~Gl~Gle~~~giP-gTVGGav~~NaGg-----yGg~~~d~v~~vevV~~~G~------i~~~~~~-~~~ 190 (322)
T 3tx1_A 124 KLIDTAKFALNESLSGLEFACGIP-GSIGGALHMNAGA-----YGGEISDVLEAATVLTQTGE------LKKLKRS-ELK 190 (322)
T ss_dssp BHHHHHHHHHHTTEESCGGGTTCC-SBHHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSC------EEEEEGG-GCC
T ss_pred CHHHHHHHHHHcCCcccccCCCCc-chhHHHHHhCccC-----cccchHhhEEEEEEEcCCCC------EEEechH-HcC
Confidence 999999999999996 44444444 5999999999988 34799999999999999999 8888653 345
Q ss_pred hhhhcC-CC-CeEEEEEEEEEeEecCc
Q 009304 164 DAAKVS-LG-VLGVISQVTLKLQPLFK 188 (538)
Q Consensus 164 ~a~~~s-~G-~lGVIt~vtl~l~p~~~ 188 (538)
++.+.+ +| ..||||++||++.|.+.
T Consensus 191 ~~yR~s~~g~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 191 AAYRFSTIAEKNYIVLDATFSLALEEK 217 (322)
T ss_dssp --CC-CTTTGGGCEEEEEEEECEECCH
T ss_pred cchhhcccCCCCEEEEEEEEEEEeCCH
Confidence 555543 23 35899999999999864
No 25
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.83 E-value=5.7e-20 Score=188.74 Aligned_cols=166 Identities=14% Similarity=0.116 Sum_probs=137.6
Q ss_pred CCCCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCCCccCCCCcEEEEcCCCCCeeEEeCCC-CEEEEeCC
Q 009304 5 RSACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKLVCPDGQDGLLISTKYLNKIINIDTEA-MTITMESG 83 (538)
Q Consensus 5 ~~~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~~~~~~~~gv~Idl~~ln~v~~vd~~~-~~vtv~aG 83 (538)
++...|..++.|+|++||+++|++|++++.++.++ |+||+..... ..+|++|+++ |+++..+|.+. .+|+|+||
T Consensus 10 ~igg~a~~~v~p~s~eel~~~l~~a~~~~~pv~vl-GgGSnll~~d---~~~GvVI~l~-~~~i~~i~~~~~~~v~vgAG 84 (340)
T 1uxy_A 10 GIDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLIL-GEGSNVLFLE---DYRGTVIINR-IKGIEIHDEPDAWYLHVGAG 84 (340)
T ss_dssp CCCCBEEEEEEESSHHHHHHHHHHHHHTTCCEEEE-SSCTTEEECS---CEEEEEEEEC-CCCEEEEECSSEEEEEEETT
T ss_pred CCCccccEEEEeCCHHHHHHHHHHHHHcCCCEEEE-CCCcCCcccC---CCCeEEEEcc-CCCcEEEecCCCeEEEEecC
Confidence 45678999999999999999999999999999999 7777532211 1258999996 99988888777 79999999
Q ss_pred CCHHHHHHHHHHCCCc-ccccccccccchhhhhccCCcCCCccCCCCchhcceeEEEEEee-CCCCCCcccEEEcCCCcc
Q 009304 84 VTLRQIIGESAKAGLA-LPYTPYWWGLTIGGLIGTGAHGSSLWGRGSSIHDYVVELRIVSS-GGPDDGYAKVRVLNENDQ 161 (538)
Q Consensus 84 v~l~~L~~~l~~~Gl~-l~~~~~~~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~~l~vV~~-~G~~~g~~~v~~~~~~~~ 161 (538)
++|.+|.+++.++||. +.+..++++ ||||++++|+.+ +++.++|.|.++++|++ +|+ +++++.+ +
T Consensus 85 ~~~~~l~~~~~~~Gl~Gle~~~gIPG-tVGGa~~~NaGa-----yG~ei~d~v~~v~vv~~~~G~------v~~~~~~-d 151 (340)
T 1uxy_A 85 ENWHRLVKYTLQEGMPGLENLALIPG-CVGSSPIQNIGA-----YGVELQRVCAYVDSVELATGK------QVRLTAK-E 151 (340)
T ss_dssp SBHHHHHHHHHHTTCCSCGGGTTCCS-BGGGTTTTTCEE-----TTEEGGGTEEEEEEEETTTTE------EEEEETG-G
T ss_pred CCHHHHHHHHHHCCCCccccccCCcc-chhHHHHhcccc-----chhhHHhheeEEEEEECCCCc------EEEEeHH-H
Confidence 9999999999999996 666677774 999999999866 23469999999999997 998 8888753 4
Q ss_pred chhhhhcC-----CCCeEEEEEEEEEeEecCc
Q 009304 162 DLDAAKVS-----LGVLGVISQVTLKLQPLFK 188 (538)
Q Consensus 162 ~f~a~~~s-----~G~lGVIt~vtl~l~p~~~ 188 (538)
.+++.+.| .|.+||||++||++.|.+.
T Consensus 152 ~~~gYR~s~~~~~~~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 152 CRFGYRDSIFKHEYQDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp GTCBTTBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred hccccCcCccCCcCCCCEEEEEEEEEEEcCCC
Confidence 46666654 3469999999999999864
No 26
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.81 E-value=5.2e-20 Score=189.67 Aligned_cols=165 Identities=15% Similarity=0.119 Sum_probs=135.3
Q ss_pred CCCCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCCCccCCCCcEEEEcCCCCCeeEEe--CCCCEEEEeC
Q 009304 5 RSACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKLVCPDGQDGLLISTKYLNKIINID--TEAMTITMES 82 (538)
Q Consensus 5 ~~~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~~~~~~~~gv~Idl~~ln~v~~vd--~~~~~vtv~a 82 (538)
++...|..++.|+|++||+++|++|+++++++.++ |+||+.... +..+|++|+++ |++| +++ .+..+|+|+|
T Consensus 26 ~igg~a~~vv~p~s~eel~~~v~~a~~~~ipv~vl-GgGSNll~~---d~~~GvVI~l~-~~~i-~v~~~~~~~~v~v~A 99 (357)
T 3i99_A 26 GIEQLAAQLVVAESIDDLKALYCSAEWASLPKLII-GKGSNMLFT---CHYTGMIVVNR-LNGI-EHQQDDDYHRLHVAG 99 (357)
T ss_dssp CCSCEEEEEEEECSHHHHHHHHSSSTTTTSCEEEE-SSCTTEEEC---SCEEEEEEEEC-CCCE-EEEECSSEEEEEEET
T ss_pred CCCccceEEEEECCHHHHHHHHHHHHHcCCCEEEE-CCCcCcccC---CCCCeEEEEcC-CCce-EEeccCCceEEEEeC
Confidence 56678899999999999999999999999999999 777753211 11348999998 9995 665 3567999999
Q ss_pred CCCHHHHHHHHHHCCCc-ccccccccccchhhhhccCCcCCCccCCCC-chhcceeEEEEEee-CCCCCCcccEEEcCCC
Q 009304 83 GVTLRQIIGESAKAGLA-LPYTPYWWGLTIGGLIGTGAHGSSLWGRGS-SIHDYVVELRIVSS-GGPDDGYAKVRVLNEN 159 (538)
Q Consensus 83 Gv~l~~L~~~l~~~Gl~-l~~~~~~~~~tvGG~i~tg~hGs~~~~~~G-~~~d~V~~l~vV~~-~G~~~g~~~v~~~~~~ 159 (538)
|++|.+|.+++.++||+ +.+..++++ ||||++++|+.. || .++|+|+++++|++ +|+ +++++.+
T Consensus 100 G~~~~~l~~~a~~~Gl~GlE~l~gIPG-tVGGav~~NaGa------YG~e~~d~v~~vevv~~~~G~------i~~~~~~ 166 (357)
T 3i99_A 100 GEDWPSLVSWCVEQGIGGLENLALIPG-CAGSAPIQNIGA------YGVEFKDVCDYVEYLCLETGT------VKRLTME 166 (357)
T ss_dssp TSBHHHHHHHHHHTTCTTCGGGTTCCS-BGGGTTTTTCEE------TTEEGGGTEEEEEEEETTTTE------EEEEETG
T ss_pred CCcHHHHHHHHHHcCCcCccccCCCCc-hhHHHHHhchhh------hhhhHHhhEeEEEEEECCCCc------EEEEeHH
Confidence 99999999999999997 666677664 999999999853 44 59999999999999 898 8888754
Q ss_pred ccchhhhhcC-----CCCeEEEEEEEEEeEecCce
Q 009304 160 DQDLDAAKVS-----LGVLGVISQVTLKLQPLFKR 189 (538)
Q Consensus 160 ~~~f~a~~~s-----~G~lGVIt~vtl~l~p~~~~ 189 (538)
+.+++.+.| +|.+||||++||+|.|.+..
T Consensus 167 -dl~f~YR~s~~~~~~g~~gIIt~v~f~L~p~~~~ 200 (357)
T 3i99_A 167 -ECQFGYRDSIFKHQLYQKAVVTAVGLKFAKAWQP 200 (357)
T ss_dssp -GGCCBTTBCGGGTTTTTTEEEEEEEEEEESSCCC
T ss_pred -HcCcccccccCCCccCCCEEEEEEEEEEEeCCcc
Confidence 345556554 35899999999999998753
No 27
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.76 E-value=2.3e-18 Score=166.18 Aligned_cols=115 Identities=18% Similarity=0.179 Sum_probs=99.5
Q ss_pred eEEeCCCCEEEEeCCCCHHHHHHHHHHCCCcccccccccccchhhhhccCCcCCCccCCCCchhcceeEEEEEeeCCCCC
Q 009304 69 INIDTEAMTITMESGVTLRQIIGESAKAGLALPYTPYWWGLTIGGLIGTGAHGSSLWGRGSSIHDYVVELRIVSSGGPDD 148 (538)
Q Consensus 69 ~~vd~~~~~vtv~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~~l~vV~~~G~~~ 148 (538)
+++|+++++|+||||+++.+|.++|.++|+.+|..|+....||||++++|+|| . ++|.. |+|+++++|+++|+
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~~~Gl~~~~~Pg~~~~tVGG~v~~nagG---~-~yG~~-D~V~~vevV~~dG~-- 73 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLAGTGLFPPFPPVELPGGVGGLVARGGFA---Q-TFFFP-AEVLGLTFRTPKGR-- 73 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHTTTTEECSSCSEECTTHHHHHHHTTCSS---B-SSCGG-GGEEEEEEECTTSC--
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHHHcCCEEeccCCCCCCchhheeccCccc---c-cCCCc-cEEEEEEEEeCCCC--
Confidence 47899999999999999999999999999999998874334999999999999 2 57888 99999999999998
Q ss_pred CcccEEEcCCC-------ccchhhhhcCCCCeEEEEEEEEEeEecCceeEEEE
Q 009304 149 GYAKVRVLNEN-------DQDLDAAKVSLGVLGVISQVTLKLQPLFKRSITFL 194 (538)
Q Consensus 149 g~~~v~~~~~~-------~~~f~a~~~s~G~lGVIt~vtl~l~p~~~~~~~~~ 194 (538)
+++++.. .++|++.+++.|+|||||++||++.|.++......
T Consensus 74 ----i~~~~~~~~kn~~gydl~~~~~Gs~G~lGIVt~~tlrl~p~~~~~~~~~ 122 (219)
T 2yvs_A 74 ----RVRAGGVVVKNVQGYDLVRLFVGSFGLLGRAEEVVLRLRPGRAQAFLRR 122 (219)
T ss_dssp ----EEEEECSSCSSSSCSCHHHHHTTCTTTTCEEEEEEEECEECSEEEEEEE
T ss_pred ----EEEECCccccCCCCcchHHHhccCCCceEEEEEEEEEEEECCcccEEEE
Confidence 7776542 23488889999999999999999999988655443
No 28
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.73 E-value=6.6e-18 Score=167.62 Aligned_cols=153 Identities=16% Similarity=0.123 Sum_probs=120.5
Q ss_pred CCCCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCCCccCCCCcEEEEcCCCCCeeEEeCCCCEEEEeCCC
Q 009304 5 RSACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKLVCPDGQDGLLISTKYLNKIINIDTEAMTITMESGV 84 (538)
Q Consensus 5 ~~~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~~~~~~~~gv~Idl~~ln~v~~vd~~~~~vtv~aGv 84 (538)
++...|. +++|+|++||+++| ++++.++ |+||+...... +.++|++|++++||+| ++|. +|+||+
T Consensus 18 ~igg~a~-vv~p~s~edv~~~v------~ipv~v~-GgGsnll~~d~-~~~~GvVI~l~~~~~I-~vd~-----~v~aG~ 82 (268)
T 2gqt_A 18 GVGGPAE-LWTVETREELKRAT------EAPYRVL-GNGSNLLVLDE-GVPERVIRLAGEFQTY-DLKG-----WVGAGT 82 (268)
T ss_dssp CCCCEEE-EEEECSHHHHHHHT------TSCEEEC-SSSSSEEECTT-CCSSEEEEECGGGGCB-CTTS-----EEETTS
T ss_pred ccCcceE-EEEeCCHHHHHHHh------CCCeEEc-CCCcCceecCC-CcCCeEEEEcCCCCCc-EEcC-----EEECCC
Confidence 3455677 99999999999999 7899888 77776432111 1223899999999996 4662 999999
Q ss_pred CHHHHHHHHHHCCCc-ccccccccccchhhhhccCCcCCCccCCCC-chhcceeEEEEEeeCCCCCCcccEEEcCCCccc
Q 009304 85 TLRQIIGESAKAGLA-LPYTPYWWGLTIGGLIGTGAHGSSLWGRGS-SIHDYVVELRIVSSGGPDDGYAKVRVLNENDQD 162 (538)
Q Consensus 85 ~l~~L~~~l~~~Gl~-l~~~~~~~~~tvGG~i~tg~hGs~~~~~~G-~~~d~V~~l~vV~~~G~~~g~~~v~~~~~~~~~ 162 (538)
+|.+|.+++.++||+ +.....+++ ||||++++|+.+ || .++|+|+++++| ++|+ +++++.+ +.
T Consensus 83 ~~~~l~~~~~~~Gl~Gle~~~giPG-tvGGav~~NaGa------yG~e~~d~v~~v~vv-~~G~------v~~~~~~-~l 147 (268)
T 2gqt_A 83 LLPLLVQEAARAGLSGLEGLLGIPA-QVGGAVKMNAGT------RFGEMADALEAVEVF-HDGA------FHVYCPE-EL 147 (268)
T ss_dssp BHHHHHHHHHHTTEESCGGGTTCCC-BHHHHHHTTCEE------TTEEGGGGEEEEEEE-ETTE------EEEECGG-GS
T ss_pred CHHHHHHHHHHcCCcCCccccCccc-hhHHHHHhcccc------CchhHHhheeEEEEE-CCCc------EEEEchH-Hc
Confidence 999999999999997 555566664 999999999865 45 799999999999 9998 8888753 45
Q ss_pred hhhhhcCCCC-eEEEEEEEEEeEecC
Q 009304 163 LDAAKVSLGV-LGVISQVTLKLQPLF 187 (538)
Q Consensus 163 f~a~~~s~G~-lGVIt~vtl~l~p~~ 187 (538)
+++.+.+.-. -||||++||++.|.+
T Consensus 148 ~~~YR~s~~~~~gIVt~~~~~L~~~~ 173 (268)
T 2gqt_A 148 GFGYRKSHLPPGGIVTRVRLKLKERP 173 (268)
T ss_dssp CCBTTBCCCSTTCEEEEEEECCEECC
T ss_pred ccccCCCCcCCCceEEEEEEEEEeCC
Confidence 6777765411 149999999999974
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=98.23 E-value=2.6e-06 Score=85.22 Aligned_cols=156 Identities=17% Similarity=0.137 Sum_probs=93.4
Q ss_pred CcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCC-CccCCCCcEEEEcCC---CCCeeEEeCCCCEEEEeCCC
Q 009304 9 KAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKL-VCPDGQDGLLISTKY---LNKIINIDTEAMTITMESGV 84 (538)
Q Consensus 9 ~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~-~~~~~~~gv~Idl~~---ln~v~~vd~~~~~vtv~aGv 84 (538)
.+-.++.|+|.+|+.++++.. +.+.+++ +||.+.... .......+++||+++ |+. +++ +...++++||+
T Consensus 4 ~~~~~~~P~s~~ea~~ll~~~---~~~~~il-aGGT~ll~~~~~~~~~~~~lIdl~~i~eL~~-i~~--~~~~l~iGA~~ 76 (287)
T 1ffv_C 4 PRFEYHAPKSVGEAVALLGQL---GSDAKLL-AGGHSLLPMMKLRFAQPEHLIDINRIPELRG-IRE--EGSTVVIGAMT 76 (287)
T ss_dssp CCCEEECCSSHHHHHHHHHHH---GGGEEEE-SSCTTHHHHHHTTSCCCSEEEECTTCGGGCC-EEE--ETTEEEEETTC
T ss_pred CcceEECCCCHHHHHHHHHhc---CCCCEEE-ECchHHHHHHhcCCCCCCEEEECCCChhhcc-eEe--cCCEEEEccCC
Confidence 345789999999999999864 2457888 666552110 000112379999985 555 333 44579999999
Q ss_pred CHHHHHHH-HHHCCCc-----ccccccc---cccchhhhhccCCcCCCccCCCCchhccee----EEEEEeeCCCCCCcc
Q 009304 85 TLRQIIGE-SAKAGLA-----LPYTPYW---WGLTIGGLIGTGAHGSSLWGRGSSIHDYVV----ELRIVSSGGPDDGYA 151 (538)
Q Consensus 85 ~l~~L~~~-l~~~Gl~-----l~~~~~~---~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~----~l~vV~~~G~~~g~~ 151 (538)
++.+|.+. +.+.++. +....+. +..||||+|.++...+ .+...+. .+++..++|+
T Consensus 77 tl~~l~~~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~~~-------D~~~~l~Al~A~v~~~~~~G~----- 144 (287)
T 1ffv_C 77 VENDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDPGN-------DHPALSIAVEAHFVLEGPNGR----- 144 (287)
T ss_dssp BHHHHHHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCTTC-------SHHHHHHHTTCEEEEEETTEE-----
T ss_pred cHHHHhhChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCCCcH-------HHHHHHHHcCcEEEEEcCCce-----
Confidence 99999963 3333332 1122222 2369999999986421 2222222 5778888773
Q ss_pred cEEEcCCCccchhhh-hcCCCCeEEEEEEEEEeEec
Q 009304 152 KVRVLNENDQDLDAA-KVSLGVLGVISQVTLKLQPL 186 (538)
Q Consensus 152 ~v~~~~~~~~~f~a~-~~s~G~lGVIt~vtl~l~p~ 186 (538)
+++..+ +.|... ...+.-=-||++++|.+.+.
T Consensus 145 --r~i~~~-df~~g~~~t~l~~~eii~~i~ip~~~~ 177 (287)
T 1ffv_C 145 --RTVPAD-GFFLGTYMTLLEENEVMVEIRVPAFAQ 177 (287)
T ss_dssp --EEEEST-TTEEETTEESCCTTCEEEEEEEECCCT
T ss_pred --EEEEHH-HHhcCcccccCCCCCEEEEEEecCCCC
Confidence 444332 112211 12222224899999987764
No 30
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=97.69 E-value=0.00012 Score=73.18 Aligned_cols=155 Identities=14% Similarity=0.190 Sum_probs=91.6
Q ss_pred CcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCC-CccCCCCcEEEEcCCCCCeeEEeCCCCEEEEeCCCCHH
Q 009304 9 KAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKL-VCPDGQDGLLISTKYLNKIINIDTEAMTITMESGVTLR 87 (538)
Q Consensus 9 ~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~-~~~~~~~gv~Idl~~ln~v~~vd~~~~~vtv~aGv~l~ 87 (538)
.+-.++.|+|.+|+.++++.. +...+++ +||++.... -.....-+++||++++..+-.|..+.+.++++|++++.
T Consensus 4 ~~~~~~~P~sl~ea~~ll~~~---~~~a~~l-aGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~~t~~ 79 (288)
T 1n62_C 4 GSFDYHRPKSIADAVALLTKL---GEDARPL-AGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIREEGTDVVIGAMTTQH 79 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHHH---GGGEEEE-SSCTTHHHHHHTTSCCCSEEEECTTCGGGSCEEEETTEEEEETTCBHH
T ss_pred CceEEECcCCHHHHHHHHHhc---CCCCEEE-ECchHHHHHHhcCCCCCCEEEECCCChhhcceEecCCEEEEccCCcHH
Confidence 345789999999999999754 2346788 677662111 00001237999998754333344455689999999999
Q ss_pred HHHH--HHHHCCCccc----cccc--c-cccchhhhhccCCcCCCccCCCCchhccee-------EEEEEeeCCCCCCcc
Q 009304 88 QIIG--ESAKAGLALP----YTPY--W-WGLTIGGLIGTGAHGSSLWGRGSSIHDYVV-------ELRIVSSGGPDDGYA 151 (538)
Q Consensus 88 ~L~~--~l~~~Gl~l~----~~~~--~-~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~-------~l~vV~~~G~~~g~~ 151 (538)
+|.+ .+.++--.|. ...+ + +..||||.|+++.. .+|.+. .+++..++|+
T Consensus 80 ~l~~~~~~~~~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~p----------~sD~~~~L~Al~A~v~l~~~~G~----- 144 (288)
T 1n62_C 80 ALIGSDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAANGDP----------GNDMPALMQCLGAAYELTGPEGA----- 144 (288)
T ss_dssp HHHHCHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCCT----------TCSHHHHHHHHTCEEEEEETTEE-----
T ss_pred HHhcChHHHHHHHHHHHHHHHhCCHHHHccccccchhccCCC----------chHHHHHHHHhCcEEEEEeCCcc-----
Confidence 9995 4544211111 1111 1 23699999998842 234433 5667777763
Q ss_pred cEEEcCCCccchhhh--hcCCCCeEEEEEEEEEeEec
Q 009304 152 KVRVLNENDQDLDAA--KVSLGVLGVISQVTLKLQPL 186 (538)
Q Consensus 152 ~v~~~~~~~~~f~a~--~~s~G~lGVIt~vtl~l~p~ 186 (538)
+++.. .+|... ...+.-=-+|++|+|...+.
T Consensus 145 --r~v~~--~df~~g~~~t~l~~~eil~~i~ip~~~~ 177 (288)
T 1n62_C 145 --RIVAA--RDYYQGAYFTAIEPGELLTAIRIPVPPT 177 (288)
T ss_dssp --EEEEH--HHHEEETTEESCCTTCEEEEEEEECCCT
T ss_pred --EEEEH--HHHhcCcccccCCCCCEEEEEEeCCCCC
Confidence 33322 133221 12333335899999987654
No 31
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=97.34 E-value=0.00014 Score=77.27 Aligned_cols=151 Identities=15% Similarity=0.034 Sum_probs=91.7
Q ss_pred CEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCCC-ccCCCCcEEEEcCC---CCCeeEEeCCCCEEEEeCCCCH
Q 009304 11 ADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKLV-CPDGQDGLLISTKY---LNKIINIDTEAMTITMESGVTL 86 (538)
Q Consensus 11 ~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~~-~~~~~~gv~Idl~~---ln~v~~vd~~~~~vtv~aGv~l 86 (538)
..++.|+|.+|+.++++.. . ..+++ +||.+..... ......+++||+++ |+. ++.+ ...++++||+++
T Consensus 178 ~~y~~P~sl~ea~~ll~~~---~-~a~il-aGGT~L~~~~k~~~~~~~~lIdl~~i~eL~~-I~~~--~~~l~IGA~vtl 249 (462)
T 2w3s_A 178 APAFLPETSDALADWYLAH---P-EATLI-AGGTDVSLWVTKALRDLPEVAFLSHCKDLAQ-IRET--PDGYGIGAGVTI 249 (462)
T ss_dssp -CCBCCSSHHHHHHHHHHC---T-TCEEE-SSCTTTTHHHHTSCCCCCSEEECTTCGGGSC-EEEE--TTEEEEETTCBH
T ss_pred cEEEecCCHHHHHHHHhhC---C-CCEEE-eCCchhhhhhhccCCCCCEEEEcCCChhhCc-EEEc--CCEEEEccCCcH
Confidence 3578999999999998753 1 46778 5665532210 00112368999988 455 3443 457999999999
Q ss_pred HHHHHHHHHCCCc-c----cccccc---cccchhhhhccCCcCCCccCCCCchhccee----EEEEEeeCCCCCCcccEE
Q 009304 87 RQIIGESAKAGLA-L----PYTPYW---WGLTIGGLIGTGAHGSSLWGRGSSIHDYVV----ELRIVSSGGPDDGYAKVR 154 (538)
Q Consensus 87 ~~L~~~l~~~Gl~-l----~~~~~~---~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~----~l~vV~~~G~~~g~~~v~ 154 (538)
.+|.+.+. .++. | ....+. +-.||||+|+++.+++ .+...++ .+++..++|+ +
T Consensus 250 ~~l~~~l~-~~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp~s-------D~~~~L~ALdA~v~l~~~~G~-------R 314 (462)
T 2w3s_A 250 AALRAFAE-GPHPALAGLLRRFASEQVRQVATIGGNIANGSPIG-------DGPPALIAMGASLTLRRGQER-------R 314 (462)
T ss_dssp HHHHHHHT-TTCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCTTC-------SHHHHHHHTTCEEEEEBTTBC-------C
T ss_pred HHHHHHHH-HHhHHHHHHHHHhCChhheeeEEcccccccCCCcc-------hHHHHHHHcCCEEEEEeCCce-------E
Confidence 99998843 3332 1 222221 2269999999998663 3445555 6777777774 2
Q ss_pred EcCCCccchhh-h-hcCCCCeEEEEEEEEEeEec
Q 009304 155 VLNENDQDLDA-A-KVSLGVLGVISQVTLKLQPL 186 (538)
Q Consensus 155 ~~~~~~~~f~a-~-~~s~G~lGVIt~vtl~l~p~ 186 (538)
++.. .+|.. . ...+.-=-||++|+|...+.
T Consensus 315 ~vp~--~dF~~g~~~t~L~~~Eii~~i~iP~~~~ 346 (462)
T 2w3s_A 315 RMPL--EDFFLEYRKQDRRPGEFVESVTLPKSAP 346 (462)
T ss_dssp CCBG--GGGEEETTEESCCTTCEEEEEEEESCCS
T ss_pred EEEH--HHhhcccccccCCCCcEEEEEEEecCCC
Confidence 2222 12221 1 11222224899999977653
No 32
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=97.27 E-value=0.0012 Score=66.29 Aligned_cols=163 Identities=15% Similarity=0.144 Sum_probs=93.1
Q ss_pred CCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCCC-ccCCCCcEEEEcCCCCCeeEEeCCCCEEEEeCCCCH
Q 009304 8 CKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKLV-CPDGQDGLLISTKYLNKIINIDTEAMTITMESGVTL 86 (538)
Q Consensus 8 ~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~~-~~~~~~gv~Idl~~ln~v~~vd~~~~~vtv~aGv~l 86 (538)
..+..++.|+|.+|+.++++.. . ..+++ +||.+..... .....-..+||++++..+-.|..+.+.++++|++++
T Consensus 8 g~~~~y~~P~sl~ea~~ll~~~---~-~a~~l-aGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~ 82 (305)
T 3nvz_B 8 GERVTWIQASTLKELLDLKAQH---P-EAKLV-VGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACAL 82 (305)
T ss_dssp CSSCEEEECCSHHHHHHHHHHC---T-TCEEC-SSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEECSSEEEEETTCBH
T ss_pred CCCeEEEccCCHHHHHHHHHhC---C-CCEEE-ECccHHHHHHhcCCCCCCEEEECCCChhhcceEECCCeEEEccCCcH
Confidence 4567899999999999988643 1 35677 5665532110 001123689999986544344445678999999999
Q ss_pred HHHHHHHHHC-------------CC--ccccccc--c-cccchhhhhccCCcCCCccCCCCchhcceeEEEEEeeCCCCC
Q 009304 87 RQIIGESAKA-------------GL--ALPYTPY--W-WGLTIGGLIGTGAHGSSLWGRGSSIHDYVVELRIVSSGGPDD 148 (538)
Q Consensus 87 ~~L~~~l~~~-------------Gl--~l~~~~~--~-~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~~l~vV~~~G~~~ 148 (538)
.+|.+.+.++ .| ++....+ + +..||||.|+++...+-.. ..+--.=-.+++..++|+
T Consensus 83 ~~l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~p~sD~~---~~L~AldA~v~l~~~~G~-- 157 (305)
T 3nvz_B 83 SSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASPISDLN---PVFMASGTKLTIVSRGTR-- 157 (305)
T ss_dssp HHHHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCCTTCSSH---HHHHHHTCEEEEEETTEE--
T ss_pred HHHHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCCCchHHH---HHHHHcCCEEEEEcCCCc--
Confidence 9999876532 11 1112222 1 2469999999987653321 111111114566677764
Q ss_pred CcccEEEcCCCccchhhh-hcCCCCeEEEEEEEEEeEe
Q 009304 149 GYAKVRVLNENDQDLDAA-KVSLGVLGVISQVTLKLQP 185 (538)
Q Consensus 149 g~~~v~~~~~~~~~f~a~-~~s~G~lGVIt~vtl~l~p 185 (538)
+++.-+++.|... ...+.-=-+||+|.|...+
T Consensus 158 -----R~vp~~~df~~g~~~t~l~~~Eil~~I~iP~~~ 190 (305)
T 3nvz_B 158 -----RTVPMDHTFFPSYRKTLLGPEEILLSIEIPYSR 190 (305)
T ss_dssp -----EEEECCGGGCCSTTCCSCCTTCEEEEEEEECCC
T ss_pred -----EEEEeehHhhcCcccccCCCCcEEEEEEecCCC
Confidence 3343321222211 1222222489999986544
No 33
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=97.16 E-value=0.00053 Score=68.39 Aligned_cols=149 Identities=21% Similarity=0.235 Sum_probs=91.0
Q ss_pred CcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCC-----CCCccCCCCcEEEEcCCCCCeeEEeCCCCEEEEeCC
Q 009304 9 KAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIP-----KLVCPDGQDGLLISTKYLNKIINIDTEAMTITMESG 83 (538)
Q Consensus 9 ~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~-----~~~~~~~~~gv~Idl~~ln~v~~vd~~~~~vtv~aG 83 (538)
.+-.++.|+|.+|+.++++. +-..+++ .||++.. ....+ ..+||++++..+-.|..+.+.++++|+
T Consensus 4 ~~f~y~~P~sl~ea~~ll~~----~~~a~~l-aGGT~l~~~~k~~~~~~----~~lIdl~~i~eL~~I~~~~~~l~IGA~ 74 (288)
T 1t3q_C 4 PAFSYRAPASLQEVIQVLAD----DPDARII-AGGQSLLPLLAFRLVYP----SCLVDLRNVSELFEISQSAGILSVGAM 74 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHH----CTTCEEE-SSCTTHHHHHHTTCCCC----SEEEECTTCGGGGCEEEETTEEEEETT
T ss_pred CCceEECCCCHHHHHHHHhh----CCCCEEE-eCchhHHHHHhcCCCCC----CEEEECCCChhhcCeEEcCCEEEEcCC
Confidence 35578999999999999874 2245677 6777621 12222 689999986543344445678999999
Q ss_pred CCHHHHHH--HHHHCCCccc----cc--ccc-cccchhhhhccCCcCCCccCCCCchhccee-------EEEEEeeCCCC
Q 009304 84 VTLRQIIG--ESAKAGLALP----YT--PYW-WGLTIGGLIGTGAHGSSLWGRGSSIHDYVV-------ELRIVSSGGPD 147 (538)
Q Consensus 84 v~l~~L~~--~l~~~Gl~l~----~~--~~~-~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~-------~l~vV~~~G~~ 147 (538)
+++.+|.+ .+.++--.|. .. +.+ +-.||||.|+++.. .+|... .+++..++|+
T Consensus 75 vt~~~l~~~~~~~~~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~p----------~sD~~~~L~Al~A~v~l~~~~g~- 143 (288)
T 1t3q_C 75 VTHFRNKTDPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHADA----------GAEMPFLMATLGATMYIASSAGV- 143 (288)
T ss_dssp CBHHHHHHCHHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTCT----------TCHHHHHHHHTTCEEEEEETTEE-
T ss_pred CcHHHHhcCHHHHHHHHHHHHHHHHhCCHHHHcceechhhcccCCC----------cHHHHHHHHHcCcEEEEEcCCce-
Confidence 99999997 4443221111 11 112 33699999996632 345554 6677777773
Q ss_pred CCcccEEEcCCCccchhhh--hcCCCCeEEEEEEEEEeEe
Q 009304 148 DGYAKVRVLNENDQDLDAA--KVSLGVLGVISQVTLKLQP 185 (538)
Q Consensus 148 ~g~~~v~~~~~~~~~f~a~--~~s~G~lGVIt~vtl~l~p 185 (538)
+++.- .+|... ...+.-=-+||+|.|...+
T Consensus 144 ------R~vp~--~dF~~g~~~t~L~~~Eil~~I~iP~~~ 175 (288)
T 1t3q_C 144 ------RSVSA--TDFMKGHYFTDLEAGEVLVRVEIPIPA 175 (288)
T ss_dssp ------EEEEH--HHHEEETTEESCCTTCEEEEEEEECCS
T ss_pred ------EEEEH--HHHhcCcccccCCCCCEEEEEEecCCC
Confidence 33322 133222 1233333589999986543
No 34
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=96.36 E-value=0.0037 Score=62.52 Aligned_cols=108 Identities=19% Similarity=0.083 Sum_probs=66.9
Q ss_pred cCEEEeCCCHHHHHHHHHHHHHcCC-ceEEEeCCCCCCCCCC-ccCCCCcEEEEcCCCCCeeEEeCCCCEEEEeCCCCHH
Q 009304 10 AADVAYPTSEQEIISVVSAATIAKR-KMKVATRFSHSIPKLV-CPDGQDGLLISTKYLNKIINIDTEAMTITMESGVTLR 87 (538)
Q Consensus 10 p~~v~~P~s~~el~~~v~~a~~~~~-~v~v~~ggghS~~~~~-~~~~~~gv~Idl~~ln~v~~vd~~~~~vtv~aGv~l~ 87 (538)
+-.++.|+|.+|+.++++.. +- ..+++ .||.+..... .....-..+||++++..+-.|..+.+.++++|++++.
T Consensus 3 ~f~y~~P~sl~ea~~ll~~~---~~~~a~~l-aGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~~ 78 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLHQY---KDVPPAII-AGGTDLVIEINDRWEKPDVVIDIKKLKELEYIRVEENTIHIGALSTFT 78 (296)
T ss_dssp CCEEECCSSHHHHHHHHHHT---TTSCCEEE-SSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEECSSEEEEETTCBHH
T ss_pred ceeEeCCCCHHHHHHHHHhC---CCCCeEEE-ECCcHHHHHhhcCCCCCCeEEEcccChhhcceEEcCCeEEEccCCcHH
Confidence 45689999999999888643 22 35677 6666532110 0001226899999875444455567799999999999
Q ss_pred HHHHH--HHHCC--C--cccccc--cc-cccchhhhhccCCcC
Q 009304 88 QIIGE--SAKAG--L--ALPYTP--YW-WGLTIGGLIGTGAHG 121 (538)
Q Consensus 88 ~L~~~--l~~~G--l--~l~~~~--~~-~~~tvGG~i~tg~hG 121 (538)
+|.+. +.++= | ++.... .+ +-.||||.|+++.+-
T Consensus 79 ~l~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNi~~a~p~ 121 (296)
T 3hrd_C 79 QIENHPFIRSHVRALYKAASQVGSPQIRNLGTIGGNLSTSSVA 121 (296)
T ss_dssp HHHHCHHHHHHCHHHHHHHHTSSCHHHHHHCBHHHHHHHTCTT
T ss_pred HHHhChhhhhHhHHHHHHHHHhCCHHHhcceehhhhhccCCCc
Confidence 99752 22110 0 111111 11 236999999976654
No 35
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=94.63 E-value=0.027 Score=56.82 Aligned_cols=98 Identities=17% Similarity=0.188 Sum_probs=62.1
Q ss_pred cCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCC-----CCCccCCCCcEEEEcCCCCCeeEEeCC-CCEEEEeCC
Q 009304 10 AADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIP-----KLVCPDGQDGLLISTKYLNKIINIDTE-AMTITMESG 83 (538)
Q Consensus 10 p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~-----~~~~~~~~~gv~Idl~~ln~v~~vd~~-~~~vtv~aG 83 (538)
+-.++.|+|.+|+.++++. . .-+++ .||.+.. +...+ ..+||++++..+-.|..+ ++.++++|+
T Consensus 6 ~f~y~~P~sl~ea~~ll~~---~--~a~~l-AGGT~l~~~~k~~~~~p----~~lIdi~~i~eL~~I~~~~~~~l~IGA~ 75 (324)
T 1rm6_B 6 DFRTHRPATLADAVNALAA---E--ATLPL-GAGTDLLPNLRRGLGHP----AALVDLTGIDGLATISTLADGSLRIGAG 75 (324)
T ss_dssp CCEEECCSSHHHHHHHTTS---T--TEEEE-SSCTTHHHHHHTTSCCC----SEEEECTTSTTTTCEEECTTSCEEEETT
T ss_pred ceEEEccCCHHHHHHHHhC---C--CCEEE-ECchhHHHHHhccCCCC----CEEEECCCChhhcceEECCCCeEEEccC
Confidence 4468999999999998862 2 35677 5666532 22223 689999887544444443 347999999
Q ss_pred CCHHHHHHH--HHHCC--C--cccc--cccc-cccchhhhhcc
Q 009304 84 VTLRQIIGE--SAKAG--L--ALPY--TPYW-WGLTIGGLIGT 117 (538)
Q Consensus 84 v~l~~L~~~--l~~~G--l--~l~~--~~~~-~~~tvGG~i~t 117 (538)
+++.+|.+. +.++= | ++.. .+.+ +-.||||.|+.
T Consensus 76 vt~~~l~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNl~~ 118 (324)
T 1rm6_B 76 ATLEAIAEHDAIRTTWPALAQAAESVAGPTHRAAATLGGNLCQ 118 (324)
T ss_dssp CBHHHHHHCHHHHHHSHHHHHHHHHSSCHHHHHHCBHHHHHTC
T ss_pred CcHHHHHhChHHHHHHHHHHHHHHHhCCHHHcceeEeeeeccc
Confidence 999999874 22210 0 0111 1222 23699999974
No 36
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=93.71 E-value=0.12 Score=61.57 Aligned_cols=129 Identities=15% Similarity=0.125 Sum_probs=76.4
Q ss_pred cCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCCC-ccCCCCcEEEEcCCCCCeeEEeCCCCEEEEeCCCCHHH
Q 009304 10 AADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKLV-CPDGQDGLLISTKYLNKIINIDTEAMTITMESGVTLRQ 88 (538)
Q Consensus 10 p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~~-~~~~~~gv~Idl~~ln~v~~vd~~~~~vtv~aGv~l~~ 88 (538)
+...++|+|.+|+.++++.. -..+++ .||.+..... .....-..+||++++..+-.|..+...++++|++++.+
T Consensus 233 ~~~~~~P~sl~ea~~ll~~~----~~a~lv-aGgT~l~~~~k~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vtl~~ 307 (1332)
T 3unc_A 233 RVTWIQASTLKELLDLKAQH----PEAKLV-VGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACALSS 307 (1332)
T ss_dssp SCEEEECCSHHHHHHHHHHC----TTCEEC-SSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEECSSEEEEETTCBHHH
T ss_pred ceEEEccCCHHHHHHHHhhC----CCCEEE-EeCcHHHHHhhcCCCCCCeEEEcCCCHHhCceEEeCCEEEEEecChHHH
Confidence 45689999999999987642 124566 5655422110 00012258999998754444555567899999999999
Q ss_pred HHHHHHHC----C---------C--cccccc--cc-cccchhhhhccCCcCCCccCCCCchhcceeEEEEEeeCCC
Q 009304 89 IIGESAKA----G---------L--ALPYTP--YW-WGLTIGGLIGTGAHGSSLWGRGSSIHDYVVELRIVSSGGP 146 (538)
Q Consensus 89 L~~~l~~~----G---------l--~l~~~~--~~-~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~~l~vV~~~G~ 146 (538)
|.+.+.+. . | ++.... .+ +..||||.|+++.+-+-+. ..+-..=-.++|..++|+
T Consensus 308 l~~~l~~~~~~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNI~~asp~sD~~---~~LlAl~A~v~l~~~~G~ 380 (1332)
T 3unc_A 308 VEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASPISDLN---PVFMASGTKLTIVSRGTR 380 (1332)
T ss_dssp HHHHHHHHHHHSCGGGCHHHHHHHHHHHTSSCHHHHHHCBHHHHHHHCCTTCSSH---HHHHHTTCEEEEEETTEE
T ss_pred HHHHHHHHhhhccccccchhHHHHHHHHHhCCHHHhceeeccceecccCCchhHH---HHHHHcCCEEEEEeCCCc
Confidence 99876432 0 0 111111 11 2269999999988755432 111111124556666664
No 37
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=89.07 E-value=0.64 Score=50.47 Aligned_cols=102 Identities=12% Similarity=0.083 Sum_probs=64.3
Q ss_pred EEEEEEEEeccchHHHHHHHHHHHHhCcccccCceeecceEEEEecCCCCCCCCCCCeEEEEEeEeccCCCCCccchHHH
Q 009304 342 FHQTTFSIRLSVVKSFIDDIQKLIKLEPKALCGLELYNGILMRYVKASSAYLGKQEDSLDFDITYYRSKDPMTPRLYEDI 421 (538)
Q Consensus 342 ~~~~E~~vP~~~~~~~i~dv~~l~~~~~~~~~~~~~~~pi~iRfv~~s~a~Ls~~~d~~~i~i~~y~~~~~~~p~~~~~~ 421 (538)
....+++||+++++++ +++++.++..... .+-|... +...+++++...... .++.+
T Consensus 455 ~~~~Dvavp~~~l~~~-~~~~~~l~~~~~~----------~~~~GH~-------g~g~~H~~~~~~~~~------~~~~i 510 (571)
T 1f0x_A 455 ILALDIALRRNDTEWY-EHLPPEIDSQLVH----------KLYYGHF-------MCYVFHQDYIVKKGV------DVHAL 510 (571)
T ss_dssp EEEEEEECCTTCSCCS-CCCCHHHHTTEEE----------EEEEEET-------TTTEEEEEEEEETTC------CHHHH
T ss_pred ceEEEEEecHHHhHHH-HHHHHHHHhhCcc----------ceeEEEE-------cCCceEEeeecCCch------hHHHH
Confidence 3568999999999999 9999988753210 0112222 124566666553221 26677
Q ss_pred HHHHHHHHHhhcCCeeccCCCCCcchhhHHHhC-CCHHHHHHHHHhcCCCCCCCch
Q 009304 422 LEEIEQLAVFKYGGFPHWGKNRNLVFDGVIKKY-KNAGEFFKVKDKYDPLGLFSSE 476 (538)
Q Consensus 422 ~~eie~~~~~k~gGrPHWgK~~~~~~~~~~~~Y-p~~~~F~~~r~~~DP~g~F~n~ 476 (538)
.+++-++ +.++||..- =.|..... | +... |.++|+.+||+++|...
T Consensus 511 ~~~~~~~-v~~~GGsis--aEHGvG~~-----~~~~~~-m~~iK~~~DP~~ilNPG 557 (571)
T 1f0x_A 511 KEQMLEL-LQQRGAQYP--AEHNVGHL-----YKAPET-LQKFYRENDPTNSMNPG 557 (571)
T ss_dssp HHHHHHH-HHHTTCBSC--SSSCCTTT-----SCCCHH-HHHHHHHHCTTCCBSTT
T ss_pred HHHHHHH-HHHcCCeEE--eeccCCcc-----cCCHHH-HHHHHHHhCCCCCCCCC
Confidence 8888887 689999321 11222111 4 2333 99999999999999763
No 38
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=88.12 E-value=1.3 Score=47.46 Aligned_cols=110 Identities=15% Similarity=0.091 Sum_probs=62.4
Q ss_pred EEEEEec--cchHHHHHHHHHHHHhCcccccCceeecceEEEEecCCCCCCCCCCCeEEEEEeE-eccCCCCCccchHHH
Q 009304 345 TTFSIRL--SVVKSFIDDIQKLIKLEPKALCGLELYNGILMRYVKASSAYLGKQEDSLDFDITY-YRSKDPMTPRLYEDI 421 (538)
Q Consensus 345 ~E~~vP~--~~~~~~i~dv~~l~~~~~~~~~~~~~~~pi~iRfv~~s~a~Ls~~~d~~~i~i~~-y~~~~~~~p~~~~~~ 421 (538)
....+|. +++++++++++++.+++.-. ..+ |... +...+++.+.. +...++......+++
T Consensus 394 ~d~~vp~~~~~l~~~~~~~~~~~~~~~~~-------~~~---~gh~-------gdGnlH~~i~~~~~~~~~~~~~~~~~~ 456 (520)
T 1wvf_A 394 FAPVSEARGSECKKQAAMAKRVLHKYGLD-------YVA---EFIV-------APRDMHHVIDVLYDRTNPEETKRADAC 456 (520)
T ss_dssp ECBEEESCHHHHHHHHHHHHHHHHHTTCC-------CCE---EEEE-------CSSEEEEEEEEEEETTCHHHHHHHHHH
T ss_pred eccccCCCHHHHHHHHHHHHHHHHHcCCC-------eeE---eecc-------cCcceeeeeccccCCCCHHHHHHHHHH
Confidence 5667888 99999999999999864311 000 1110 12355555532 322221111224455
Q ss_pred HHHHHHHHHhhcCCeeccCCCCC-cch-hhHHHhC-C-CHHHHHHHHHhcCCCCCCCch
Q 009304 422 LEEIEQLAVFKYGGFPHWGKNRN-LVF-DGVIKKY-K-NAGEFFKVKDKYDPLGLFSSE 476 (538)
Q Consensus 422 ~~eie~~~~~k~gGrPHWgK~~~-~~~-~~~~~~Y-p-~~~~F~~~r~~~DP~g~F~n~ 476 (538)
++++-+. ..+||. |.... ..+ +.+...| | .+.-+.++|+.|||+|+|...
T Consensus 457 ~~~~~~~-~~ehG~----G~~k~~~~~~~~~~~~~g~~~~~lmr~IK~a~DP~~IlNPG 510 (520)
T 1wvf_A 457 FNELLDE-FEKEGY----AVYRVNTRFQDRVAQSYGPVKRKLEHAIKRAVDPNNILAPG 510 (520)
T ss_dssp HHHHHHH-HHHTTC----CBSCCCGGGHHHHHHHTCHHHHHHHHHHHHHHCTTCCBCTT
T ss_pred HHHHHHH-HHHcCC----CccccChhHhhhhhhhcCHHHHHHHHHHHHHcCCCCCCCCC
Confidence 6666555 356653 44332 112 2335566 3 567889999999999998763
No 39
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=87.77 E-value=1.6 Score=52.26 Aligned_cols=103 Identities=14% Similarity=0.153 Sum_probs=64.3
Q ss_pred EEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCCCcc--CCCCcEEEEcCCCCCeeEEeCCCCEEEEeCCCCHHHH
Q 009304 12 DVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKLVCP--DGQDGLLISTKYLNKIINIDTEAMTITMESGVTLRQI 89 (538)
Q Consensus 12 ~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~~~~--~~~~gv~Idl~~ln~v~~vd~~~~~vtv~aGv~l~~L 89 (538)
..+.|.|.+||.++.+.-. + .+++ +|++-.++-.. ...-.++||+.+...+-.|......++++|+|++.++
T Consensus 242 ~w~~P~tl~el~~l~~~~p--~--a~lv--aGnT~~gl~~~~~~~~~~~~I~~~~v~EL~~i~~~~~~l~IGA~vtls~~ 315 (1335)
T 3zyv_A 242 TWIAPGTLNDLLELKMKHP--S--APLV--IGNTYLGLHMKFTDVSYPIIISPARILELFVVTNTKQGLTLGTGLSLTQV 315 (1335)
T ss_dssp EEEECSSHHHHHHHHHHCT--T--SCBC--SSCTTHHHHHC--CCCCSEEECCTTCGGGSCEECCTTEEEEETTCBHHHH
T ss_pred eEecCCCHHHHHHHHHHCC--C--CeEE--EecccceeeEeecCCCCCeEEEcCcchhHheEEecCCEEEEcccCcHHHH
Confidence 4688999999999865422 2 2334 33332222111 1123589998876665566777788999999999999
Q ss_pred HHHHHHCCCccc---------------ccc--cc-cccchhhhhccCCc
Q 009304 90 IGESAKAGLALP---------------YTP--YW-WGLTIGGLIGTGAH 120 (538)
Q Consensus 90 ~~~l~~~Gl~l~---------------~~~--~~-~~~tvGG~i~tg~h 120 (538)
.+.|.+.--.+| ... .+ +..||||.|+++.-
T Consensus 316 ~~~l~~~~~~~~~~~~~~~~~l~~~l~~fAs~qIRN~aTigGNI~~asP 364 (1335)
T 3zyv_A 316 KNVLSDVVSRLPKEKTQIYCALLKQLKTLAGQQIRNVASLGGHIISRLP 364 (1335)
T ss_dssp HHHHHHHHTTSCTTTCTTHHHHHHHHTTSSCHHHHHHCBHHHHHHTCCT
T ss_pred HHHHHHHHhhcchhhhhhHHHHHHHHHHhcchhhcCcccccCceeccCC
Confidence 998864211111 111 11 23699999997753
No 40
>3q8j_A Asteropsin A, ABU8-1; cystine knot, marine sponge, marine knottin, toxin; HET: PCA; 0.87A {Asteropus}
Probab=80.62 E-value=0.75 Score=28.99 Aligned_cols=29 Identities=45% Similarity=0.826 Sum_probs=21.7
Q ss_pred CCCCCcceeecCCCCCCCCCCCccccCCc
Q 009304 493 EGCALEGLCICSQDIHCAPTKGYLCRPGK 521 (538)
Q Consensus 493 ~~c~~~~~c~c~~~~hc~~~~~~~c~~~~ 521 (538)
+|||.||.-.=-+--.|-|..|-.|-||-
T Consensus 1 egcafegescnvqfypccpglgltcipgn 29 (37)
T 3q8j_A 1 EGCAFEGESCNVQFYPCCPGLGLTCIPGN 29 (37)
T ss_dssp CCCBCTTSEEETTTBCBCTTSCEEEEECS
T ss_pred CCceecCcccceEEecCCCCCCcEecCCC
Confidence 58999995444455667778899998884
No 41
>2gvs_A Chemosensory protein CSP-SG4; alpha-coil, lipid binding protein; NMR {Schistocerca gregaria}
Probab=65.26 E-value=3.4 Score=34.47 Aligned_cols=30 Identities=30% Similarity=0.575 Sum_probs=26.3
Q ss_pred HHHhCCCHHHHHHHHHhcCCCCCCCchhhHhh
Q 009304 450 VIKKYKNAGEFFKVKDKYDPLGLFSSEWTDQV 481 (538)
Q Consensus 450 ~~~~Yp~~~~F~~~r~~~DP~g~F~n~~~~~l 481 (538)
+.+.+| +.|.++.++|||+|.+.+.|-+.+
T Consensus 75 l~~n~P--~~W~~L~~KyDP~g~y~~ky~~~~ 104 (109)
T 2gvs_A 75 LINHKP--DVWAQLKAKYDPDGTYSKKYEDRE 104 (109)
T ss_dssp HHHHCH--HHHHHHHHHHCTTCTTTHHHHTTT
T ss_pred HHHcCh--HHHHHHHHHHCCCchHHHHHHHHH
Confidence 567778 899999999999999999988764
No 42
>1k19_A Chemosensory protein CSP2; pheromone, lipid transport; NMR {Mamestra brassicae} SCOP: a.118.21.1 PDB: 1kx8_A 1kx9_A 1n8u_A* 1n8v_A* 2jnt_A
Probab=62.10 E-value=3.4 Score=34.66 Aligned_cols=30 Identities=27% Similarity=0.504 Sum_probs=26.7
Q ss_pred HHHhCCCHHHHHHHHHhcCCCCCCCchhhHhh
Q 009304 450 VIKKYKNAGEFFKVKDKYDPLGLFSSEWTDQV 481 (538)
Q Consensus 450 ~~~~Yp~~~~F~~~r~~~DP~g~F~n~~~~~l 481 (538)
+.+.+| +.|.++.++|||+|.+.+.|-+.+
T Consensus 73 l~~n~P--~~W~~L~~KyDP~g~y~~~y~~~~ 102 (112)
T 1k19_A 73 LIKNEI--EIWRELTAKYDPTGNWRKKYEDRA 102 (112)
T ss_dssp HHHHHS--CHHHHHHHSSTTTCSSHHHHHHHH
T ss_pred HHHcCh--HHHHHHHHHHCCCchHHHHHHHHH
Confidence 677789 689999999999999999998865
No 43
>1cix_A Protein (tachystatin A); antimicrobial peptide, chitin-binding peptide; NMR {Tachypleus tridentatus} SCOP: g.3.6.2
Probab=49.57 E-value=12 Score=24.87 Aligned_cols=29 Identities=41% Similarity=1.051 Sum_probs=20.6
Q ss_pred CCCCcc-eeecCCC----CCCCCCCCcccc---CCcccc
Q 009304 494 GCALEG-LCICSQD----IHCAPTKGYLCR---PGKVYK 524 (538)
Q Consensus 494 ~c~~~~-~c~c~~~----~hc~~~~~~~c~---~~~~~~ 524 (538)
-|-++| .|+-..- ..|- .||+|| ||..|-
T Consensus 3 ~c~~~g~~c~v~s~glpt~~cc--~g~~cr~~fpgs~~g 39 (44)
T 1cix_A 3 RCQLQGFNCVVRSYGLPTIPCC--RGLTCRSYFPGSTYG 39 (44)
T ss_dssp CCCCTTEEECSCCTTSCSCCCC--TTCEEEESSTTCSCE
T ss_pred eeEEecceEEEEeCCCCCccee--cceEEcccCCCccce
Confidence 366777 6766665 5666 699998 777774
No 44
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=39.29 E-value=61 Score=27.39 Aligned_cols=39 Identities=10% Similarity=-0.018 Sum_probs=34.1
Q ss_pred CCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCC
Q 009304 7 ACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHS 45 (538)
Q Consensus 7 ~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS 45 (538)
...+..|+...+++|+.++.+.|.+.|++..++.-+|++
T Consensus 46 ~G~~Kvvlk~~~e~el~~L~~~a~~~gl~~~~I~DAG~T 84 (123)
T 1rzw_A 46 EGQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLT 84 (123)
T ss_dssp GCSSEEEEECSCHHHHHHHHHHHHHTTCCEEEECCTTCC
T ss_pred CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEECCCCc
Confidence 456888999999999999999999999998887678876
No 45
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=33.32 E-value=62 Score=27.09 Aligned_cols=39 Identities=15% Similarity=0.087 Sum_probs=34.3
Q ss_pred CCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCC
Q 009304 7 ACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHS 45 (538)
Q Consensus 7 ~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS 45 (538)
...|..|+...+++|+.++.+.|.+.|++..++.-+|++
T Consensus 52 ~g~~KiVlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 90 (120)
T 1xty_A 52 QGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAGKT 90 (120)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCSSS
T ss_pred CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 457889999999999999999999999998777678875
No 46
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=32.19 E-value=69 Score=26.89 Aligned_cols=39 Identities=13% Similarity=0.021 Sum_probs=34.1
Q ss_pred CCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCC
Q 009304 7 ACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHS 45 (538)
Q Consensus 7 ~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS 45 (538)
...|..|+...+++|+.++.+.|.+.|++..++.-+|++
T Consensus 53 ~g~~Kvvlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 91 (121)
T 1wn2_A 53 EGQKKVVVKVESEEELFKLKAEAEKLGLPNALIRDAGLT 91 (121)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECTTCT
T ss_pred CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 456788899999999999999999999998777678875
No 47
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=29.83 E-value=71 Score=26.61 Aligned_cols=39 Identities=10% Similarity=-0.020 Sum_probs=34.2
Q ss_pred CCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCC
Q 009304 7 ACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHS 45 (538)
Q Consensus 7 ~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS 45 (538)
...|..|+...+++|+.++.+.|.+.|++..++.-+|++
T Consensus 49 ~g~~kiVlk~~~e~~l~~l~~~a~~~gl~~~~v~DAG~T 87 (117)
T 1rlk_A 49 EGQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGYT 87 (117)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCSS
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 457888999999999999999999999998777678775
No 48
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=26.12 E-value=70 Score=26.56 Aligned_cols=39 Identities=18% Similarity=0.170 Sum_probs=32.1
Q ss_pred CCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCC
Q 009304 7 ACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHS 45 (538)
Q Consensus 7 ~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS 45 (538)
...|..|+...+++|+.++.+.|.+.|++..++.-+|++
T Consensus 47 ~g~~kivlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~T 85 (115)
T 2zv3_A 47 EGQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDAGHT 85 (115)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEEECC--
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHcCCCEEEEEeCCce
Confidence 456888999999999999999999999987777567765
No 49
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=25.82 E-value=98 Score=21.75 Aligned_cols=31 Identities=10% Similarity=0.132 Sum_probs=24.9
Q ss_pred eEEeCCCCEEEEe--CCCCHHHHHHHHHHCCCc
Q 009304 69 INIDTEAMTITME--SGVTLRQIIGESAKAGLA 99 (538)
Q Consensus 69 ~~vd~~~~~vtv~--aGv~l~~L~~~l~~~Gl~ 99 (538)
+.+|...++++|. ..+...+|.+.+.+.|+.
T Consensus 33 ~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~ 65 (69)
T 4a4j_A 33 CQVNFALEQAVVSYHGETTPQILTDAVERAGYH 65 (69)
T ss_dssp EEEETTTTEEEEEECTTCCHHHHHHHHHHTTCE
T ss_pred EEEEecCCEEEEEECCCCCHHHHHHHHHHcCCc
Confidence 3566677777777 778999999999999975
No 50
>2dcv_A Tachystatin-B1; antimicrobial, cystine-knot, antimicrobial protein; NMR {Tachypleus tridentatus} PDB: 2dcw_A
Probab=23.51 E-value=43 Score=22.55 Aligned_cols=23 Identities=35% Similarity=0.894 Sum_probs=18.4
Q ss_pred CCCCcc-eeecCCCCCCCCCCCcccc
Q 009304 494 GCALEG-LCICSQDIHCAPTKGYLCR 518 (538)
Q Consensus 494 ~c~~~~-~c~c~~~~hc~~~~~~~c~ 518 (538)
.|..|| .|.=-...||= +||+|+
T Consensus 3 ~Cv~e~~~CadWsgp~CC--~GyyCs 26 (42)
T 2dcv_A 3 SCLFRGARCRVYSGRSCC--FGYYCR 26 (42)
T ss_dssp CCBCTTCEEETTCSSCBS--TTEEEE
T ss_pred hhhcCCCceecccCCCcc--CCcEEc
Confidence 488887 77776677887 799999
No 51
>2r2z_A Hemolysin; APC85144, enterococcus faecalis V583, STRU initiative, midwest center for structural genomics, MCSG; 1.20A {Enterococcus faecalis} SCOP: d.145.1.4
Probab=22.02 E-value=93 Score=24.36 Aligned_cols=39 Identities=10% Similarity=-0.025 Sum_probs=29.9
Q ss_pred CCEEEEeCCCCHHHHHHHHHHCCCcccccccccccchhhhhccCC
Q 009304 75 AMTITMESGVTLRQIIGESAKAGLALPYTPYWWGLTIGGLIGTGA 119 (538)
Q Consensus 75 ~~~vtv~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~tvGG~i~tg~ 119 (538)
.++..|.+.+++.+|++.+ |+.+|.. ..-||||++..-.
T Consensus 15 dg~~~v~G~~~l~dl~~~l---~~~l~~~---~~~TlgG~i~~~l 53 (93)
T 2r2z_A 15 DNEYLVQGRMLIDEFNEVF---ETDLHMS---DVDTMAGYLITAL 53 (93)
T ss_dssp TTEEEEETTSBHHHHHHHH---TCCCCCT---TCCBHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHh---CCCCCCC---CcccHHHHHHHHh
Confidence 4678999999999999887 5666542 3369999997643
No 52
>1q7s_A BIT1, protein CGI-147; apoptosis; 2.00A {Homo sapiens} SCOP: c.131.1.1
Probab=21.44 E-value=1.1e+02 Score=25.28 Aligned_cols=38 Identities=11% Similarity=0.169 Sum_probs=32.4
Q ss_pred CCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCC
Q 009304 8 CKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHS 45 (538)
Q Consensus 8 ~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS 45 (538)
..|..++.-.+++|+.++.+.|.+.|++..++.-+|++
T Consensus 50 g~~KVvlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~T 87 (117)
T 1q7s_A 50 GQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQDAGRT 87 (117)
T ss_dssp TCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEEECSSS
T ss_pred CCeeEEEEcCCHHHHHHHHHHHHHCCCCEEEEEECCCc
Confidence 45788999999999999999999999987777567764
Done!