Query         009304
Match_columns 538
No_of_seqs    304 out of 2096
Neff          7.6 
Searched_HMMs 13730
Date          Mon Mar 25 23:28:33 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009304.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/009304hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1w1oa2 d.145.1.1 (A:40-245) C 100.0 1.6E-34 1.2E-38  275.6  19.1  176    1-186    21-206 (206)
  2 d1wvfa2 d.145.1.1 (A:7-242) Fl 100.0 7.9E-31 5.8E-35  255.0  20.3  176    3-187    45-236 (236)
  3 d2i0ka2 d.145.1.1 (A:58-273) C 100.0 8.1E-31 5.9E-35  251.7  18.8  179    1-186    22-216 (216)
  4 d1e8ga2 d.145.1.1 (A:6-273) Va 100.0 8.6E-28 6.3E-32  237.6  23.3  172    6-187    62-268 (268)
  5 d1f0xa2 d.145.1.1 (A:9-273) D-  99.8 4.2E-20 3.1E-24  181.2  17.1  137    6-146    34-176 (265)
  6 d1hska1 d.145.1.2 (A:15-208) U  99.8 5.4E-19 3.9E-23  165.6  13.8  162    5-185    30-194 (194)
  7 d1uxya1 d.145.1.2 (A:3-200) Ur  99.8 1.7E-18 1.2E-22  162.4  15.7  169    5-189    10-184 (198)
  8 d2i0ka1 d.58.32.3 (A:274-613)   99.5 6.1E-14 4.5E-18  131.4  15.7  156  303-482   136-339 (340)
  9 d1ffvc2 d.145.1.3 (C:1-177) Ca  97.2 0.00058 4.2E-08   60.9   9.3  105   10-122     5-123 (177)
 10 d1v97a6 d.145.1.3 (A:192-414)   97.0 0.00075 5.5E-08   62.4   8.2  156   11-181    43-218 (223)
 11 d1t3qc2 d.145.1.3 (C:1-176) Qu  96.8  0.0013 9.5E-08   58.4   8.0  107   10-121     5-121 (176)
 12 d1w1oa1 d.58.32.4 (A:246-534)   96.7  0.0026 1.9E-07   60.2   9.9  118  345-475   153-283 (289)
 13 d1jroa4 d.145.1.3 (A:179-345)   96.6 0.00095 6.9E-08   58.8   5.5  125   14-146     3-135 (167)
 14 d1rm6b2 d.145.1.3 (B:1-216) 4-  96.6  0.0014   1E-07   60.0   6.5  101   10-120     6-121 (216)
 15 d1n62c2 d.145.1.3 (C:1-177) Ca  96.5  0.0028   2E-07   56.2   8.0  159   10-184     5-175 (177)
 16 d1wvfa1 d.58.32.1 (A:243-521)   93.6   0.065 4.7E-06   50.2   7.7  110  346-475   156-268 (279)
 17 d1e8ga1 d.58.32.1 (A:274-560)   91.8    0.17 1.2E-05   47.2   7.9  116  341-476   149-271 (287)
 18 d1f0xa1 d.58.32.2 (A:274-567)   77.2     1.2 8.6E-05   41.7   5.3  103  342-476   182-284 (294)
 19 d1n8va_ a.118.21.1 (A:) Chemos  76.8    0.59 4.3E-05   36.6   2.4   29  450-480    71-99  (101)
 20 d2o1ra1 d.145.1.4 (A:1-78) Hyp  48.2      12 0.00088   26.9   4.9   41   74-120     4-44  (78)
 21 d2plia1 d.145.1.4 (A:5-88) Unc  45.6      20  0.0015   26.1   5.9   47   67-121     4-50  (84)
 22 d2oaia1 d.145.1.4 (A:5-91) Hem  42.7      14   0.001   27.2   4.5   44   74-120     9-52  (87)
 23 d1f0xa1 d.58.32.2 (A:274-567)   41.0    0.58 4.2E-05   43.9  -4.9   56  127-188    15-77  (294)
 24 d2p3ha1 d.145.1.4 (A:5-102) Un  37.9      26  0.0019   26.4   5.5   41   75-121     8-48  (98)
 25 d1qupa2 d.58.17.1 (A:2-73) Cop  37.7      24  0.0018   24.7   5.1   37   63-99     28-66  (72)
 26 d1fe0a_ d.58.17.1 (A:) ATX1 me  37.2      19  0.0014   24.9   4.3   32   69-100    30-61  (66)
 27 d2plsa1 d.145.1.4 (A:345-428)   36.3      28   0.002   25.2   5.4   46   73-121     4-50  (84)
 28 d1cc8a_ d.58.17.1 (A:) ATX1 me  35.4      20  0.0015   25.2   4.3   32   69-100    35-66  (72)
 29 d2rk5a1 d.145.1.4 (A:5-88) Put  33.5      21  0.0015   25.8   4.2   40   75-120     5-44  (84)
 30 d1mcvi_ g.3.2.1 (I:) Trypsin i  32.1     7.5 0.00055   21.7   0.9   23  495-520     2-24  (28)
 31 d2ggpb1 d.58.17.1 (B:1-72) Cop  31.3      38  0.0028   23.4   5.3   39   62-100    24-66  (72)
 32 d1sb6a_ d.58.17.1 (A:) Copper   30.7      32  0.0023   23.3   4.6   32   69-100    32-63  (64)
 33 d2r2za1 d.145.1.4 (A:5-88) Put  30.2      26  0.0019   25.4   4.2   39   75-119     8-46  (84)
 34 d1rlka_ c.131.1.1 (A:) Hypothe  30.2      38  0.0028   26.3   5.5   38    8-45     49-86  (116)
 35 d1emxa_ g.3.6.2 (A:) Heteropda  26.9      13 0.00097   21.1   1.4   14  503-518    10-23  (30)
 36 d3erja1 c.131.1.1 (A:2-117) Hy  24.9      56  0.0041   25.2   5.6   39    8-46     46-84  (116)
 37 d1t2ya_ g.46.1.1 (A:) Metallot  24.1      18  0.0013   19.7   1.6   19  499-517     1-19  (26)
 38 d2p13a1 d.145.1.4 (A:431-515)   23.7      44  0.0032   24.1   4.5   43   74-120     9-51  (85)
 39 d1q7sa_ c.131.1.1 (A:) Bit1 (C  23.5      47  0.0034   25.8   4.8   39    8-46     50-88  (117)
 40 d1cpza_ d.58.17.1 (A:) Copper   21.3      59  0.0043   22.1   4.6   37   63-99     23-64  (68)
 41 d1ha9a_ g.3.2.1 (A:) Trypsin i  20.3      16  0.0012   21.3   0.9   16  502-519    14-29  (34)

No 1  
>d1w1oa2 d.145.1.1 (A:40-245) Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId: 4577]}
Probab=100.00  E-value=1.6e-34  Score=275.57  Aligned_cols=176  Identities=20%  Similarity=0.337  Sum_probs=160.0

Q ss_pred             CCCCCCCCCcCEEEeCCCHHHHHHHHHHHHHc---CCceEEEeCCCCCCCCCCccCCCCcEEEEcCCCCCe-----eEEe
Q 009304            1 MFPDRSACKAADVAYPTSEQEIISVVSAATIA---KRKMKVATRFSHSIPKLVCPDGQDGLLISTKYLNKI-----INID   72 (538)
Q Consensus         1 ~W~~~~~~~p~~v~~P~s~~el~~~v~~a~~~---~~~v~v~~ggghS~~~~~~~~~~~gv~Idl~~ln~v-----~~vd   72 (538)
                      +|++...+.|..|++|+|++||+++|++|+++   +++|+++ |+|||+.+.+..  +++++|||++||++     +++|
T Consensus        21 d~~~~~~~~P~~Vv~P~s~~ev~~iv~~a~~~~~~~~~v~~r-ggGhs~~g~s~~--~~~ividl~~l~~i~~~~~~~id   97 (206)
T d1w1oa2          21 DFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYTIAFR-GRGHSLMGQAFA--PGGVVVNMASLGDAAAPPRINVS   97 (206)
T ss_dssp             CTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCCEEEE-SSCCCSSSTTCC--TTSEEEEGGGGGCSSSSCSEEEC
T ss_pred             CcccCcccCCCEEEEcCCHHHHHHHHHHHHhCCCCCeEEEEE-CCCCCcccCccc--CCCEeeeccccceeeeceeEEEe
Confidence            47777788999999999999999999999997   5789888 899998877653  45899999999998     7999


Q ss_pred             CCCCEEEEeCCCCHHHHHHHHHHCCCcccccccccccchhhhhccCCcCCCccCCCCchhcceeEEEEEeeCCCCCCccc
Q 009304           73 TEAMTITMESGVTLRQIIGESAKAGLALPYTPYWWGLTIGGLIGTGAHGSSLWGRGSSIHDYVVELRIVSSGGPDDGYAK  152 (538)
Q Consensus        73 ~~~~~vtv~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~~l~vV~~~G~~~g~~~  152 (538)
                      ++.++++||||+++.||.++|.++|+.++..++...+||||+++++++|.... ++|.++|+|+++|+|+++|+      
T Consensus        98 ~~~~~v~v~aG~~~~~l~~~l~~~Gl~~~~~~~~~~~tvGG~i~~~g~g~~s~-~~G~~~d~v~~~evV~~~G~------  170 (206)
T d1w1oa2          98 ADGRYVDAGGEQVWIDVLRASLARGVAPRSWTDYLYLTVGGTLSNAGISGQAF-RHGPQISNVLEMDVITGHGE------  170 (206)
T ss_dssp             TTSSEEEEETTCBHHHHHHHHHTTTEEESCCCSSCCSBHHHHHTTCCCSTTHH-HHCCGGGSEEEEEEEETTSC------
T ss_pred             cCCCEEEEEcceehhhhhhhhhccccccccCCccCceEEeeeeccccceeccc-cccceeeeeeEEEEEcCCCc------
Confidence            99999999999999999999999999999988888899999999999887765 58999999999999999999      


Q ss_pred             EEEcCCC-ccc-hhhhhcCCCCeEEEEEEEEEeEec
Q 009304          153 VRVLNEN-DQD-LDAAKVSLGVLGVISQVTLKLQPL  186 (538)
Q Consensus       153 v~~~~~~-~~~-f~a~~~s~G~lGVIt~vtl~l~p~  186 (538)
                      +++++++ ++| |+++++|+|+|||||++|||++|+
T Consensus       171 ~~~~s~~~~~dl~~a~~g~~G~~Giit~~tl~l~PA  206 (206)
T d1w1oa2         171 MVTCSKQLNADLFDAVLGGLGQFGVITRARIAVEPA  206 (206)
T ss_dssp             EEEEESSSSHHHHHHHTTCTTCSEEEEEEEEEEEEC
T ss_pred             EEEECCCCCHHHHHHHhhCCCccEeEEEEEEEEEcC
Confidence            8888763 454 999999999999999999999995


No 2  
>d1wvfa2 d.145.1.1 (A:7-242) Flavoprotein subunit of p-cresol methylhydroxylase {Pseudomonas putida [TaxId: 303]}
Probab=99.97  E-value=7.9e-31  Score=254.96  Aligned_cols=176  Identities=18%  Similarity=0.151  Sum_probs=147.1

Q ss_pred             CCCCCCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCC-CCccCCCCcEEEEcCCCCCeeEEeCCCCEEEEe
Q 009304            3 PDRSACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPK-LVCPDGQDGLLISTKYLNKIINIDTEAMTITME   81 (538)
Q Consensus         3 ~~~~~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~-~~~~~~~~gv~Idl~~ln~v~~vd~~~~~vtv~   81 (538)
                      ..+....|.+|++|+|++||+++|++|++++.+++++ ++|||+.. ..++..+++++|||++||+|+++|+++++|+||
T Consensus        45 ~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~~i~~~-g~G~s~~~g~~~~~~~~~ividl~~mn~i~~id~~~~~v~v~  123 (236)
T d1wvfa2          45 VENAAHAPSAAVTATTVEQVQGVVKICNEHKIPIWTI-STGRNFGYGSAAPVQRGQVILDLKKMNKIIKIDPEMCYALVE  123 (236)
T ss_dssp             SCGGGGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEE-SSCCCTTTTTTSCSSTTCEEEECTTCCCEEEEETTTTEEEEC
T ss_pred             ccccCcCCCEEEecCCHHHHHHHHHHHHcCCcceecc-cccccccccccccccceEEEeecccccchhhhcccccceehh
Confidence            3455668999999999999999999999999999999 89999754 333334568999999999999999999999999


Q ss_pred             CCCCHHHHHHHHHHCCCcccccccccccchhhhh-ccCCcCCCccCCCCchhcceeEEEEEeeCCCCCCcccEEEcCC--
Q 009304           82 SGVTLRQIIGESAKAGLALPYTPYWWGLTIGGLI-GTGAHGSSLWGRGSSIHDYVVELRIVSSGGPDDGYAKVRVLNE--  158 (538)
Q Consensus        82 aGv~l~~L~~~l~~~Gl~l~~~~~~~~~tvGG~i-~tg~hGs~~~~~~G~~~d~V~~l~vV~~~G~~~g~~~v~~~~~--  158 (538)
                      ||++|.||.++|.++|+.++..++.. .++||.+ ++++||.+.. +||..+|+|+++++|++||+      +++...  
T Consensus       124 aG~~~~~l~~~l~~~g~~~~~~~~~~-~~~gG~i~~~~~~G~~~~-~yG~~~d~v~~levVl~~G~------iv~~~~~~  195 (236)
T d1wvfa2         124 PGVTFGQMYDYIQENNLPVMLSFSAP-SAIAGPVGNTMDRGVGYT-PYGEHFMMQCGMEVVLANGD------VYRTGMGG  195 (236)
T ss_dssp             TTCCHHHHHHHHHHTTCSEECCCCSS-CTTCCHHHHHHTTCBCSS-TTCBGGGGEEEEEEECTTSC------EEECGGGG
T ss_pred             hhhhhhhhHHHHhhhccccccccccc-cccccccccccccccccc-cccccccceeeeEEEcCCCc------EEEeCCcc
Confidence            99999999999999999998877755 4555555 6899998876 68999999999999999999      776432  


Q ss_pred             --Cc---cchhhhh-------cCCCCeEEEEEEEEEeEecC
Q 009304          159 --ND---QDLDAAK-------VSLGVLGVISQVTLKLQPLF  187 (538)
Q Consensus       159 --~~---~~f~a~~-------~s~G~lGVIt~vtl~l~p~~  187 (538)
                        +.   ..|++..       +|+|+|||||++|||++|+|
T Consensus       196 ~~~~~~~~~~~~~~G~~~~~l~SeGtlGIIt~~tlkl~P~P  236 (236)
T d1wvfa2         196 VPGSNTWQIFKWGYGPTLDGMFTQANYGICTKMGFWLMPKP  236 (236)
T ss_dssp             STTCSCTTTCSCCSSCCCHHHHTTSSSCEEEEEEEECEECC
T ss_pred             CCCccHHHHHhcCcCccccccccccceEEEEEEEEEEEcCC
Confidence              11   1233333       37899999999999999986


No 3  
>d2i0ka2 d.145.1.1 (A:58-273) Cholesterol oxidase {Brevibacterium sterolicum [TaxId: 1702]}
Probab=99.97  E-value=8.1e-31  Score=251.65  Aligned_cols=179  Identities=22%  Similarity=0.219  Sum_probs=155.7

Q ss_pred             CCCCCCCCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCCCccCCC----CcEEEEcCCCCCe-eEEeCCC
Q 009304            1 MFPDRSACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKLVCPDGQ----DGLLISTKYLNKI-INIDTEA   75 (538)
Q Consensus         1 ~W~~~~~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~~~~~~~----~gv~Idl~~ln~v-~~vd~~~   75 (538)
                      ||+++..+.|..|++|+|++||+++|++|++++++|+++ |+|||+++++.+...    ..++++|++||++ +++|++.
T Consensus        22 ~w~~~~~~~p~~v~~P~s~edV~~~V~~A~~~~~~v~~~-G~Ghs~~g~~~~~~~~~~~~~~~~~l~~~~~i~~~~d~~~  100 (216)
T d2i0ka2          22 NWSKEIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPR-GAMAGWTPLTVEKGANVEKVILADTMTHLNGITVNTGGPV  100 (216)
T ss_dssp             CTTSSSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEE-CCCCCCCTTSSCTTCCCTTEEEEECTTTSCCEEEECCSSS
T ss_pred             hcccccccCCCEEEeCCCHHHHHHHHHHHHhCCeeEEEE-cCcccccCCccccccCcceEEEEEeccccccccccccccc
Confidence            799999999999999999999999999999999999999 999999887665421    1366789999997 6889999


Q ss_pred             CEEEEeCCCCHHHHHHHHHHCCCcccccccccccchhhhhccCCcCCCcc---------CCCCchhcceeEEEEEeeCCC
Q 009304           76 MTITMESGVTLRQIIGESAKAGLALPYTPYWWGLTIGGLIGTGAHGSSLW---------GRGSSIHDYVVELRIVSSGGP  146 (538)
Q Consensus        76 ~~vtv~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~tvGG~i~tg~hGs~~~---------~~~G~~~d~V~~l~vV~~~G~  146 (538)
                      .+|+|++|+++.+|.++|.++|+.++..|.+..+||||++++++||++..         .+||.++|+|++++||++||+
T Consensus       101 ~~v~v~aG~~~~~l~~~l~~~g~~l~~~~~~~~~tigG~~~~~~~g~~~~~~gg~g~~~~~yG~~~d~v~~~~vV~~dG~  180 (216)
T d2i0ka2         101 ATVTAGAGASIEAIVTELQKHDLGWANLPAPGVLSIGGALAVNAHGAALPAVGQTTLPGHTYGSLSNLVTELTAVVWNGT  180 (216)
T ss_dssp             CEEEEETTSBHHHHHHHHHHTTEECSSCCSCTTCBHHHHHHTTCCCSCCCCTTCCCCTTCCSSCGGGGEEEEEEEEECSS
T ss_pred             ceEEEEeeechhhhhhhhhhcCcccccCCChhheeeccccCCCccCccccCCcccccccceecChHHeEEEEEEEeCCCC
Confidence            99999999999999999999999999999988999999999999997642         147999999999999999998


Q ss_pred             CCCcccEEEcCC--CccchhhhhcCCCCeEEEEEEEEEeEec
Q 009304          147 DDGYAKVRVLNE--NDQDLDAAKVSLGVLGVISQVTLKLQPL  186 (538)
Q Consensus       147 ~~g~~~v~~~~~--~~~~f~a~~~s~G~lGVIt~vtl~l~p~  186 (538)
                            +++++.  .++.+.+++.+.+.+||||++|||++|.
T Consensus       181 ------i~~~~~~~~~d~~~~~~~~~~g~giit~~tl~~~P~  216 (216)
T d2i0ka2         181 ------TYALETYQRNDPRITPLLTNLGRCFLTSVTMQAGPN  216 (216)
T ss_dssp             ------SEEEEEEETTSGGGHHHHSCTTSSCEEEEEEECEEC
T ss_pred             ------EEEecCccCCCcchhhHHHcCCcEEEEEEEEEEcCC
Confidence                  666543  2233566666666689999999999995


No 4  
>d1e8ga2 d.145.1.1 (A:6-273) Vanillyl-alcohol oxidase {Fungus (Penicillium simplicissimum) [TaxId: 69488]}
Probab=99.96  E-value=8.6e-28  Score=237.63  Aligned_cols=172  Identities=13%  Similarity=0.091  Sum_probs=135.6

Q ss_pred             CCCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCC-CCCCccCCCCcEEEEcCC-CCCeeEEeCCCCEEEEeCC
Q 009304            6 SACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSI-PKLVCPDGQDGLLISTKY-LNKIINIDTEAMTITMESG   83 (538)
Q Consensus         6 ~~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~-~~~~~~~~~~gv~Idl~~-ln~v~~vd~~~~~vtv~aG   83 (538)
                      ....|.+|++|+|++||+++|++|++++++|.++ ++||+. .+...+...++++|||++ ||+|+++|+++++++||||
T Consensus        62 ~~~~P~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~-g~G~~~~~~~~~~~~~~~ividls~~mn~i~~id~~~~~~~v~aG  140 (268)
T d1e8ga2          62 DYFLASAIVAPRNVADVQSIVGLANKFSFPLWPI-SIGRNSGYGGAAPRVSGSVVLDMGKNMNRVLEVNVEGAYCVVEPG  140 (268)
T ss_dssp             TSSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEE-SSCCCTTTTTTCCSSTTCEEEECTTTCCCEEEEETTTTEEEECTT
T ss_pred             cccCCCEEEeCCCHHHHHHHHHHHHHcCCCEEec-cccccccccccccccCCceeecchhhhhhhhhcccccchhhhhhh
Confidence            3445999999999999999999999999999998 555542 233333356789999975 9999999999999999999


Q ss_pred             CCHHHHHHHHHHCCCcccccccc---cccchhhhhccCCcCCCccCCCCchhcceeEEEEEeeCCCCCCcccEEEcCC--
Q 009304           84 VTLRQIIGESAKAGLALPYTPYW---WGLTIGGLIGTGAHGSSLWGRGSSIHDYVVELRIVSSGGPDDGYAKVRVLNE--  158 (538)
Q Consensus        84 v~l~~L~~~l~~~Gl~l~~~~~~---~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~~l~vV~~~G~~~g~~~v~~~~~--  158 (538)
                      +++.||.++|.++|+.+|..+..   .+.++||++++++.+  .. +||..+|+|++++||+++|+      +++...  
T Consensus       141 v~~~~l~~~l~~~G~~~~~~~~~~~~~~~~i~g~~~~~G~~--~~-~yG~~~d~v~~~~vV~~~G~------iv~~g~~~  211 (268)
T d1e8ga2         141 VTYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVERGVG--YT-PYGDHWMMHSGMEVVLANGE------LLRTGMGA  211 (268)
T ss_dssp             CBHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHTTCBC--SS-TTCBTGGGEEEEEEEETTSC------EEECGGGG
T ss_pred             hhhHHHHHHHHHHhhhhcccccccccccceEeeeecccccc--cc-cccchhcccccEEEEeCCCc------EEEeCCcc
Confidence            99999999999999998865432   345788877655333  33 58999999999999999999      654311  


Q ss_pred             -----------------Cccc----hh-------hhhcCCCCeEEEEEEEEEeEecC
Q 009304          159 -----------------NDQD----LD-------AAKVSLGVLGVISQVTLKLQPLF  187 (538)
Q Consensus       159 -----------------~~~~----f~-------a~~~s~G~lGVIt~vtl~l~p~~  187 (538)
                                       ..+.    |+       ...+|+|+|||||++|||+.|+|
T Consensus       212 ~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~g~~l~~igSeGtlGiIT~~tlrl~P~P  268 (268)
T d1e8ga2         212 LPDPKRPETMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIWLMPNP  268 (268)
T ss_dssp             SCCCCCGGGTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEEEEECEECC
T ss_pred             ccchhhhhhccccccccccccHHHHhhcccCcccccCcccceEEEEEEEEEEEecCC
Confidence                             0011    11       12478899999999999999986


No 5  
>d1f0xa2 d.145.1.1 (A:9-273) D-lactate dehydrogenase {Escherichia coli [TaxId: 562]}
Probab=99.83  E-value=4.2e-20  Score=181.21  Aligned_cols=137  Identities=20%  Similarity=0.216  Sum_probs=116.7

Q ss_pred             CCCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCCCccCC----CCcEEEEcCCCCCeeEEeCCCCEEEEe
Q 009304            6 SACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKLVCPDG----QDGLLISTKYLNKIINIDTEAMTITME   81 (538)
Q Consensus         6 ~~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~~~~~~----~~gv~Idl~~ln~v~~vd~~~~~vtv~   81 (538)
                      ....|.+|++|+|++||+++|+.|++++++|.+. |+|+|..+.+.+.+    .+.+++|+++||+|+.+| +.++++||
T Consensus        34 ~~~~p~aVV~P~s~~eV~~iv~~a~~~~~pv~~r-GgGTsl~Gg~~p~~g~~~~~~vv~~~~~m~~i~~~~-~~~~v~v~  111 (265)
T d1f0xa2          34 GQGDALAVVFPGSLLELWRVLKACVTADKIILMQ-AANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLG-KGEQVLAY  111 (265)
T ss_dssp             CBBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEE-SSCCCSSSTTSCCBSCCSSCEEEEECTTCCCEEEET-TTTEEEEC
T ss_pred             cCCCCCEEEeCCCHHHHHHHHHHHHhhcccccee-cccccccccccccccccccceeeeeccccccceecc-cccceEEE
Confidence            3568999999999999999999999999999888 89999888877642    234899999999987666 67899999


Q ss_pred             CCCCHHHHHHHHHHCCCccc--ccccccccchhhhhccCCcCCCccCCCCchhcceeEEEEEeeCCC
Q 009304           82 SGVTLRQIIGESAKAGLALP--YTPYWWGLTIGGLIGTGAHGSSLWGRGSSIHDYVVELRIVSSGGP  146 (538)
Q Consensus        82 aGv~l~~L~~~l~~~Gl~l~--~~~~~~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~~l~vV~~~G~  146 (538)
                      ||+++.+|.++|.++|+.++  ..++....||||+|++|+.|+... + |...+.+..+..|+++|+
T Consensus       112 pGv~~~~L~~~l~~~g~~~~~~~~~s~~~atiGG~ia~na~G~~~~-r-g~~~~~~~~~~~v~~~G~  176 (265)
T d1f0xa2         112 PGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQ-R-GPAYTEMSLFARINEDGK  176 (265)
T ss_dssp             TTCBHHHHHHHHGGGTEECSCCCGGGGGTCBHHHHHHTTCCCSCTT-S-CSSCCSCEEEEEECTTSC
T ss_pred             eeeeHHHHHHHHHhcCCccccCCCcccccceeeeehhhCCCCcceE-E-ccchhhhHHHhhhccCCc
Confidence            99999999999999998643  334456789999999999998876 4 457777888889999998


No 6  
>d1hska1 d.145.1.2 (A:15-208) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Probab=99.78  E-value=5.4e-19  Score=165.56  Aligned_cols=162  Identities=19%  Similarity=0.190  Sum_probs=125.4

Q ss_pred             CCCCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCCCccCCCCcEEEEcCCCCCeeEEeCCCCEEEEeCCC
Q 009304            5 RSACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKLVCPDGQDGLLISTKYLNKIINIDTEAMTITMESGV   84 (538)
Q Consensus         5 ~~~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~~~~~~~~gv~Idl~~ln~v~~vd~~~~~vtv~aGv   84 (538)
                      ++.+.+..++.|+|++||++++++|++++.|+.++ |+|++..  ....+-.|++|++.+++. ++++  ..+++|+||+
T Consensus        30 ~vGG~a~~~v~p~s~~el~~~~~~a~~~~ip~~v~-G~GSNll--~~d~~~~g~vi~l~~~~~-~~~~--~~~v~~~aG~  103 (194)
T d1hska1          30 KTGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYL-GNGSNII--IREGGIRGIVISLLSLDH-IEVS--DDAIIAGSGA  103 (194)
T ss_dssp             SCCCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEE-SSCSSEE--ECTTCEEEEEEECTTCCC-EEEE--TTEEEEETTS
T ss_pred             eeCeEEEEEEecCCHHHHHHHHHHhhhcccceEEe-ccccccc--cCCCCceeEEEEeecccc-cccc--CCeEEEEecc
Confidence            46678899999999999999999999999999999 5665421  111233589999999887 3444  4689999999


Q ss_pred             CHHHHHHHHHHCCCcccccc-cccccchhhhhccCCcCCCccCCCCchhcceeEEEEEeeCCCCCCcccEEEcCCCccch
Q 009304           85 TLRQIIGESAKAGLALPYTP-YWWGLTIGGLIGTGAHGSSLWGRGSSIHDYVVELRIVSSGGPDDGYAKVRVLNENDQDL  163 (538)
Q Consensus        85 ~l~~L~~~l~~~Gl~l~~~~-~~~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~~l~vV~~~G~~~g~~~v~~~~~~~~~f  163 (538)
                      .+.+|.+++.++||..+... +++ .||||++++|+++     +++.++|+|.++++|+++|+      +++++.++-.|
T Consensus       104 ~~~~l~~~~~~~gl~g~e~~~gip-gtvGGai~mNaG~-----yG~ei~d~v~~v~~v~~~G~------i~~l~~~e~~f  171 (194)
T d1hska1         104 AIIDVSRVARDYALTGLEFACGIP-GSIGGAVYMNAGA-----YGGEVKDCIDYALCVNEQGS------LIKLTTKELEL  171 (194)
T ss_dssp             BHHHHHHHHHHTTEESCGGGTTCC-SBHHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSC------EEEEETTTTTC
T ss_pred             chHHHHHHHHhhccccccccCCcc-eeehhhhhccCcc-----cCceEEEEEEEEEEEcCCCC------EEEEEHHHccc
Confidence            99999999999998754444 444 5999999999976     34569999999999999998      88887654233


Q ss_pred             --hhhhcCCCCeEEEEEEEEEeEe
Q 009304          164 --DAAKVSLGVLGVISQVTLKLQP  185 (538)
Q Consensus       164 --~a~~~s~G~lGVIt~vtl~l~p  185 (538)
                        +......+ -.||+++||+|.|
T Consensus       172 ~YR~s~~~~~-~~iIl~a~f~L~P  194 (194)
T d1hska1         172 DYRNSIIQKE-HLVVLEAAFTLAP  194 (194)
T ss_dssp             BTTBCHHHHT-TCEEEEEEEECEE
T ss_pred             cCCCCCCCCC-CEEEEEEEEEEEC
Confidence              22111111 2399999999998


No 7  
>d1uxya1 d.145.1.2 (A:3-200) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.77  E-value=1.7e-18  Score=162.37  Aligned_cols=169  Identities=14%  Similarity=0.131  Sum_probs=135.3

Q ss_pred             CCCCCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCCCccCCCCcEEEEcCCCCCeeEEeCCCCEEEEeCCC
Q 009304            5 RSACKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKLVCPDGQDGLLISTKYLNKIINIDTEAMTITMESGV   84 (538)
Q Consensus         5 ~~~~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~~~~~~~~gv~Idl~~ln~v~~vd~~~~~vtv~aGv   84 (538)
                      ++.+.+..++.|+|++||+++++.|++++.++.++ |+|+..  +...+..+++++++.+++.+. .|.+..+|+|+||+
T Consensus        10 ~igG~A~~~~~p~s~edl~~~l~~~~~~~~p~~vl-G~GSNl--L~~d~~~~~vi~~~~~~~~~~-~~~~~~~v~vgAG~   85 (198)
T d1uxya1          10 GIDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLIL-GEGSNV--LFLEDYRGTVIINRIKGIEIH-DEPDAWYLHVGAGE   85 (198)
T ss_dssp             CCCCBEEEEEEESSHHHHHHHHHHHHHTTCCEEEE-SSCTTE--EECSCEEEEEEEECCCCEEEE-ECSSEEEEEEETTS
T ss_pred             CcCeEeeEEEEECCHHHHHHHHHHHHHcCCCEEEE-eccccc--cccccccCcccccccccceee-ecccceEEEEeccc
Confidence            56788899999999999999999999999999999 555421  222223356788888887743 46677899999999


Q ss_pred             CHHHHHHHHHHCCCc-ccccccccccchhhhhccCCcCCCccCCCCchhcceeEEEEEe-eCCCCCCcccEEEcCCCccc
Q 009304           85 TLRQIIGESAKAGLA-LPYTPYWWGLTIGGLIGTGAHGSSLWGRGSSIHDYVVELRIVS-SGGPDDGYAKVRVLNENDQD  162 (538)
Q Consensus        85 ~l~~L~~~l~~~Gl~-l~~~~~~~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~~l~vV~-~~G~~~g~~~v~~~~~~~~~  162 (538)
                      .+.+|.+++.++||+ +....++++ ||||++.+|++.     +++.+.|.|.++++|+ .+|+      +++++.++-.
T Consensus        86 ~~~~l~~~~~~~gl~G~E~l~gIPG-tvGGai~mNaG~-----~g~ei~~~l~~V~~v~~~~G~------~~~~~~~e~~  153 (198)
T d1uxya1          86 NWHRLVKYTLQEGMPGLENLALIPG-CVGSSPIQNIGA-----YGVELQRVCAYVDSVELATGK------QVRLTAKECR  153 (198)
T ss_dssp             BHHHHHHHHHHTTCCSCGGGTTCCS-BGGGTTTTTCEE-----TTEEGGGTEEEEEEEETTTTE------EEEEETGGGT
T ss_pred             chHHHHHHHHHcCCccchhhccccc-ccchhhhhcccc-----cccchhhceeeeEEEecCCCc------EEEEeccccc
Confidence            999999999999997 666677776 999999999976     3568999999999887 7898      8888875433


Q ss_pred             h--h--hhhcCCCCeEEEEEEEEEeEecCce
Q 009304          163 L--D--AAKVSLGVLGVISQVTLKLQPLFKR  189 (538)
Q Consensus       163 f--~--a~~~s~G~lGVIt~vtl~l~p~~~~  189 (538)
                      |  +  .++...+..+||++++|++.|.++.
T Consensus       154 f~YR~S~f~~~~~~~~iIl~a~f~L~~~~~~  184 (198)
T d1uxya1         154 FGYRDSIFKHEYQDRFAIVAVGLRLPKEWQP  184 (198)
T ss_dssp             CBTTBCGGGTTTTTTEEEEEEEEEEESSCCC
T ss_pred             eecccccccccCCCCEEEEEEEEEECCCCCc
Confidence            3  2  2244567778999999999987764


No 8  
>d2i0ka1 d.58.32.3 (A:274-613) Cholesterol oxidase {Brevibacterium sterolicum [TaxId: 1702]}
Probab=99.53  E-value=6.1e-14  Score=131.41  Aligned_cols=156  Identities=17%  Similarity=0.214  Sum_probs=112.0

Q ss_pred             CcccccccccccccccccCCCCcccccccccCCCCCCccEEEEEEEEec--cchHHHHHHH----HHHHHhCcccccCce
Q 009304          303 GYPVIGHHNRLQSSGTCLDSPQDSLITACAWDPRIKGEFFHQTTFSIRL--SVVKSFIDDI----QKLIKLEPKALCGLE  376 (538)
Q Consensus       303 ~~pvvg~~~~~~~~~~~~~~~~~~~~~~~~w~~r~~~~~~~~~E~~vP~--~~~~~~i~dv----~~l~~~~~~~~~~~~  376 (538)
                      ...++||+..++.   ++               |....+.....|+|=.  +++..+|.++    ++.++.+.. ...++
T Consensus       136 s~DlWGwSk~vl~---Yi---------------r~TTLRvTanGyAVltrR~nvqrvI~eF~~~y~~r~~~Y~a-~G~yP  196 (340)
T d2i0ka1         136 ANDIWGWSKDVQF---YI---------------KATTLRLTEGGGAVVTSRANIATVINDFTEWFHERIEFYRA-KGEFP  196 (340)
T ss_dssp             CSEEEEEHHHHHC---CC---------------CTTSCCCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHHHHH-TTCCC
T ss_pred             cccccCcccccee---ee---------------ccceEEEecCCeEEEeeHHHHHHHHHHHHHHHHHHHHHHHh-cCCCC
Confidence            3468888887652   11               2234677888999964  4555555555    444443322 23467


Q ss_pred             eecceEEEEecCCCCC-----------CC---C--C---CC-eEEEEEeEeccCCCCCccchHHHHHHHHHHHHhhcCC-
Q 009304          377 LYNGILMRYVKASSAY-----------LG---K--Q---ED-SLDFDITYYRSKDPMTPRLYEDILEEIEQLAVFKYGG-  435 (538)
Q Consensus       377 ~~~pi~iRfv~~s~a~-----------Ls---~--~---~d-~~~i~i~~y~~~~~~~p~~~~~~~~eie~~~~~k~gG-  435 (538)
                      +..|+|||...-|+..           ||   |  .   -| ++|+||....    ++| ....|++||||.++..|.| 
T Consensus       197 ~NgPvEIRvtGlD~p~~~gv~ga~~P~lSAlrprpD~peWd~AiWldvLtlP----GTp-~a~~FYrEiEqwm~~ny~g~  271 (340)
T d2i0ka1         197 LNGPVEIRCCGLDQAADVKVPSVGPPTISATRPRPDHPDWDVAIWLNVLGVP----GTP-GMFEFYREMEQWMRSHYNND  271 (340)
T ss_dssp             CCSCEEEEEEECCCGGGCCSCCSCSCSSCTTCCCTTCTTCCEEEEEEEEECT----TCT-THHHHHHHHHHHHHHHSBSS
T ss_pred             CCCceEEEEecCCCHHHcCCCCCCCCchhccCCCCCCCCcceeeeeeeccCC----CCc-cHHHHHHHHHHHHHhccCCC
Confidence            8899999998766432           33   2  1   12 7999998876    556 3567999999997788999 


Q ss_pred             ----eeccCCCCCcchh----------hHHHhC-------CCHHHHHHHHHhcCCCCCCCchhhHhhh
Q 009304          436 ----FPHWGKNRNLVFD----------GVIKKY-------KNAGEFFKVKDKYDPLGLFSSEWTDQVL  482 (538)
Q Consensus       436 ----rPHWgK~~~~~~~----------~~~~~Y-------p~~~~F~~~r~~~DP~g~F~n~~~~~ll  482 (538)
                          ||.|.|...++.+          .+...|       .+|+.-++...+|||+++|+|+++|+||
T Consensus       272 ~AtvRpEWSKGWayt~~aw~D~~~l~~~ip~~~~~G~p~~~~Wd~A~~~l~~~Dp~rvFss~~Ld~Lm  339 (340)
T d2i0ka1         272 DATFRPEWSKGWAFGPDPYTDNDIVTNKMRATYIEGVPTTENWDTARARYNQIDPHRVFTNGFMDKLL  339 (340)
T ss_dssp             SEEEECCTTSCCSCSSSTTCCHHHHHTHHHHHTTTTSCTTSSHHHHHHHHHHHCTTCCSCCHHHHHHC
T ss_pred             CceeccccccccccCCCcccccchHhhhhhHHHhcCCCCCCCHHHHHHHHhccCchhhhcchhHHhhC
Confidence                9999999887653          134455       4899999999999999999999999987


No 9  
>d1ffvc2 d.145.1.3 (C:1-177) Carbon monoxide (CO) dehydrogenase flavoprotein, N-terminal domain {Hydrogenophaga pseudoflava [TaxId: 47421]}
Probab=97.20  E-value=0.00058  Score=60.86  Aligned_cols=105  Identities=22%  Similarity=0.241  Sum_probs=68.6

Q ss_pred             cCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCC-----CCCCccCCCCcEEEEcCCCCCeeEEeCCCCEEEEeCCC
Q 009304           10 AADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSI-----PKLVCPDGQDGLLISTKYLNKIINIDTEAMTITMESGV   84 (538)
Q Consensus        10 p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~-----~~~~~~~~~~gv~Idl~~ln~v~~vd~~~~~vtv~aGv   84 (538)
                      +-.++.|+|.+|+.++++....   ..+++ .||...     .+...+    ..+||+.+...+-.++.+++.++++|++
T Consensus         5 ~f~~~~P~sl~Ea~~ll~~~~~---~a~~l-aGGTdl~~~~~~~~~~~----~~lidl~~i~eL~~I~~~~~~l~IGA~~   76 (177)
T d1ffvc2           5 RFEYHAPKSVGEAVALLGQLGS---DAKLL-AGGHSLLPMMKLRFAQP----EHLIDINRIPELRGIREEGSTVVIGAMT   76 (177)
T ss_dssp             CCEEECCSSHHHHHHHHHHHGG---GEEEE-SSCTTHHHHHHTTSCCC----SEEEECTTCGGGCCEEEETTEEEEETTC
T ss_pred             CceEECCCCHHHHHHHHHhcCC---CCEEE-EeCchhHhhhhhcccCc----ccccCcccccccceEeecCceEEEeccE
Confidence            4578999999999999876532   35677 555432     122233    5899998875544455567889999999


Q ss_pred             CHHHHHHHH--HHCC--C--ccc--ccccc-cccchhhhhccCCcCC
Q 009304           85 TLRQIIGES--AKAG--L--ALP--YTPYW-WGLTIGGLIGTGAHGS  122 (538)
Q Consensus        85 ~l~~L~~~l--~~~G--l--~l~--~~~~~-~~~tvGG~i~tg~hGs  122 (538)
                      ++.+|.+.-  .+.-  +  ++.  ..+.+ +..||||.|+++...+
T Consensus        77 t~~~l~~~~~~~~~~~~l~~a~~~~as~qIRn~aTiGGni~~~~p~~  123 (177)
T d1ffvc2          77 VENDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDPGN  123 (177)
T ss_dssp             BHHHHHHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCTTC
T ss_pred             EHHHHHhCcccchHHHHHHHHHhccCChhheEEEEeccceeeccccc
Confidence            999996631  1110  0  111  12233 3479999999876553


No 10 
>d1v97a6 d.145.1.3 (A:192-414) Xanthine oxidase, domain 3 (?) {Cow (Bos taurus) [TaxId: 9913]}
Probab=96.99  E-value=0.00075  Score=62.36  Aligned_cols=156  Identities=15%  Similarity=0.131  Sum_probs=86.6

Q ss_pred             CEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCC-CccCCCCcEEEEcCCCCCeeEEeCCCCEEEEeCCCCHHHH
Q 009304           11 ADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKL-VCPDGQDGLLISTKYLNKIINIDTEAMTITMESGVTLRQI   89 (538)
Q Consensus        11 ~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~-~~~~~~~gv~Idl~~ln~v~~vd~~~~~vtv~aGv~l~~L   89 (538)
                      ...++|+|.+|+.++++.   ++ ..+++ .||.+..-. -.....-..+||++++..+-.|+.+.+.++++|++++.++
T Consensus        43 ~~w~~P~sl~ea~~ll~~---~~-~a~~v-aGGTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l  117 (223)
T d1v97a6          43 VTWIQASTLKELLDLKAQ---HP-EAKLV-VGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACALSSV  117 (223)
T ss_dssp             CEEEECCSHHHHHHHHHH---CT-TCEEC-SSCTTHHHHHHHSCCCCSEEEECTTCGGGTCEEECSSEEEEETTCBHHHH
T ss_pred             EEEECCCCHHHHHHHHHh---CC-CCEEE-EecchHHHHHhcccCCCCeEEEcccccccCeeEecCceEEEcccccHHHH
Confidence            467899999999998764   23 35666 455432110 0001123689999997655556666788999999999999


Q ss_pred             HHHHHHCC-------------C--ccccc--ccc-cccchhhhhccCCcCCCccCCCCchhcceeEEEEEeeCCCCCCcc
Q 009304           90 IGESAKAG-------------L--ALPYT--PYW-WGLTIGGLIGTGAHGSSLWGRGSSIHDYVVELRIVSSGGPDDGYA  151 (538)
Q Consensus        90 ~~~l~~~G-------------l--~l~~~--~~~-~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~~l~vV~~~G~~~g~~  151 (538)
                      .+.+.+.-             +  ++...  +.+ +..||||.|+++.-.+-+.   ..+-..=-.++++..+|+     
T Consensus       118 ~~~l~~~~~~l~~~~~~~~p~l~~a~~~ias~qIRN~aTiGGNl~~a~P~sDl~---p~Llal~A~v~l~~~~g~-----  189 (223)
T d1v97a6         118 EKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASPISDLN---PVFMASGTKLTIVSRGTR-----  189 (223)
T ss_dssp             HHHHHHHHHHSCGGGCHHHHHHHHHHHTSSCHHHHTTCBHHHHHHHCCTTCSSH---HHHHHTTCEEEEEETTEE-----
T ss_pred             HHHHHHhhhhcchhHhhhhhHHHHHHHHhCCHhHeeeeEecchhhhcccccchh---HHHHhhCeEEEEEcCCce-----
Confidence            88754311             0  01111  122 2369999999776543321   112222224455556664     


Q ss_pred             cEEEcCCCccchhhh-hcCCCCeEEEEEEEE
Q 009304          152 KVRVLNENDQDLDAA-KVSLGVLGVISQVTL  181 (538)
Q Consensus       152 ~v~~~~~~~~~f~a~-~~s~G~lGVIt~vtl  181 (538)
                        +.+.-++..|... +..+..==||++|.+
T Consensus       190 --R~ip~~~~F~~g~~kt~L~~~Eii~~I~i  218 (223)
T d1v97a6         190 --RTVPMDHTFFPSYRKTLLGPEEILLSIEI  218 (223)
T ss_dssp             --EEEECCGGGCCSTTCCSCCTTCEEEEEEE
T ss_pred             --EEEEchhhhccCcccccCCCCCEEEEEEe
Confidence              3332221122222 222222238888876


No 11 
>d1t3qc2 d.145.1.3 (C:1-176) Quinoline 2-oxidoreductase medium subunit QorM {Pseudomonas putida [TaxId: 303]}
Probab=96.82  E-value=0.0013  Score=58.43  Aligned_cols=107  Identities=20%  Similarity=0.162  Sum_probs=67.2

Q ss_pred             cCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCC-CCccCCCCcEEEEcCCCCCeeEEeCCCCEEEEeCCCCHHH
Q 009304           10 AADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPK-LVCPDGQDGLLISTKYLNKIINIDTEAMTITMESGVTLRQ   88 (538)
Q Consensus        10 p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~-~~~~~~~~gv~Idl~~ln~v~~vd~~~~~vtv~aGv~l~~   88 (538)
                      +-.++.|+|.+|+.++++.   .+ ..+++ .||.+... ..........+||++++..+-.+..+...++++|++++.+
T Consensus         5 ~f~y~~P~sl~ea~~ll~~---~~-~a~~v-aGGTdl~~~~~~~~~~p~~lIdl~~i~eL~~i~~~~~~l~IGa~vt~~~   79 (176)
T d1t3qc2           5 AFSYRAPASLQEVIQVLAD---DP-DARII-AGGQSLLPLLAFRLVYPSCLVDLRNVSELFEISQSAGILSVGAMVTHFR   79 (176)
T ss_dssp             CCEEECCSSHHHHHHHHHH---CT-TCEEE-SSCTTHHHHHHTTCCCCSEEEECTTCGGGGCEEEETTEEEEETTCBHHH
T ss_pred             CceeeCCCCHHHHHHHHHh---CC-CCEEE-ecCCchhhhhhhhccCcccccCcccccccceeeecCcceeeccchhhHH
Confidence            4568999999999998864   22 35677 55554211 0000112368999998876555666678899999999999


Q ss_pred             HHHH--HHHCCC----ccccc--ccc-cccchhhhhccCCcC
Q 009304           89 IIGE--SAKAGL----ALPYT--PYW-WGLTIGGLIGTGAHG  121 (538)
Q Consensus        89 L~~~--l~~~Gl----~l~~~--~~~-~~~tvGG~i~tg~hG  121 (538)
                      +...  +.++--    ++...  +.+ +..||||.|+++.-.
T Consensus        80 l~~~~~~~~~~p~l~~a~~~ias~qIRn~aTiGGNi~~a~p~  121 (176)
T d1t3qc2          80 NKTDPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHADAG  121 (176)
T ss_dssp             HHHCHHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTCTT
T ss_pred             HHHHhhhhhhhhHHHHHHHhcCCcceEEEEeecCcceecccc
Confidence            8643  222111    11111  222 347999999987644


No 12 
>d1w1oa1 d.58.32.4 (A:246-534) Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId: 4577]}
Probab=96.74  E-value=0.0026  Score=60.24  Aligned_cols=118  Identities=16%  Similarity=0.190  Sum_probs=70.7

Q ss_pred             EEEEEeccchHHHHHHHHH-HHHhCcccccCceeecceEEEEecCCC--CCCC---CCCCeEEEEEeEeccCCCCCccch
Q 009304          345 TTFSIRLSVVKSFIDDIQK-LIKLEPKALCGLELYNGILMRYVKASS--AYLG---KQEDSLDFDITYYRSKDPMTPRLY  418 (538)
Q Consensus       345 ~E~~vP~~~~~~~i~dv~~-l~~~~~~~~~~~~~~~pi~iRfv~~s~--a~Ls---~~~d~~~i~i~~y~~~~~~~p~~~  418 (538)
                      ...+||-+++.+|++.|-+ ++..+.       ...||++--+..+.  .-+|   |.++..|+ |-..++..+  +...
T Consensus       153 lNlfvP~s~I~~F~~~Vf~~il~~~~-------~~GpiLvYP~~~~kwd~~~s~v~Pdeevfyl-valL~sa~~--~~~~  222 (289)
T d1w1oa1         153 LNMFVPRSRIADFDRGVFKGILQGTD-------IVGPLIVYPLNKSMWDDGMSAATPSEDVFYA-VSLLFSSVA--PNDL  222 (289)
T ss_dssp             EEEEEEGGGHHHHHHHHTTTTTTTSC-------CCSCEEEEEEEGGGSCTTSSCCCCSSSEEEE-EEECCCC-----CHH
T ss_pred             eEEecchhHHHHHHHHHHHhhccccC-------CCCeEEEEEccccccCCCccccCCCCCEEEE-EEEecCCCC--cchH
Confidence            4578999999999988743 443221       23467777666542  2343   55665443 333344321  1223


Q ss_pred             HHHH---HHHHHHHHhhcCC--eeccCCCCCcchhhHHHhCC--CHHHHHHHHHhcCCCCCCCc
Q 009304          419 EDIL---EEIEQLAVFKYGG--FPHWGKNRNLVFDGVIKKYK--NAGEFFKVKDKYDPLGLFSS  475 (538)
Q Consensus       419 ~~~~---~eie~~~~~k~gG--rPHWgK~~~~~~~~~~~~Yp--~~~~F~~~r~~~DP~g~F~n  475 (538)
                      +.+.   ++|-+. ..+.|+  .+.+.  +..+.+++++-|.  +|++|.+.|++|||.++++.
T Consensus       223 ~~l~~qN~~il~~-c~~aG~~~k~yl~--~~~t~~dW~~HFG~~kW~~F~~~K~~yDP~~ILsP  283 (289)
T d1w1oa1         223 ARLQEQNRRILRF-CDLAGIQYKTYLA--RHTDRSDWVRHFGAAKWNRFVEMKNKYDPKRLLSP  283 (289)
T ss_dssp             HHHHHHHHHHHHH-HHHTTCCCEESSC--CCSSHHHHHHHHCHHHHHHHHHHHHHHCTTCCBCG
T ss_pred             HHHHHHHHHHHHH-HHHcCCcceEeCC--CCCCHHHHHHHcCcchHHHHHHHHhhCCcccccCC
Confidence            3333   333333 245555  22222  2478899999994  79999999999999998764


No 13 
>d1jroa4 d.145.1.3 (A:179-345) Xanthine dehydrogenase chain A, domain 3 {Rhodobacter capsulatus [TaxId: 1061]}
Probab=96.62  E-value=0.00095  Score=58.83  Aligned_cols=125  Identities=13%  Similarity=0.016  Sum_probs=74.5

Q ss_pred             EeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCCCc-cCCCCcEEEEcCCCCCeeEEeCCCCEEEEeCCCCHHHHHHH
Q 009304           14 AYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKLVC-PDGQDGLLISTKYLNKIINIDTEAMTITMESGVTLRQIIGE   92 (538)
Q Consensus        14 ~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~~~-~~~~~gv~Idl~~ln~v~~vd~~~~~vtv~aGv~l~~L~~~   92 (538)
                      +.|+|.+|+.++++.   +. ..+++ +||.+...... ....-..+||+.++..+-.+....+.++++|++++.++.+.
T Consensus         3 y~P~tl~e~~~l~~~---~p-~a~~v-aGGTdl~~~~~~~~~~~~~~idl~~i~eL~~i~~~~~~l~IGA~vt~~~l~~~   77 (167)
T d1jroa4           3 FLPETSDALADWYLA---HP-EATLI-AGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRETPDGYGIGAGVTIAALRAF   77 (167)
T ss_dssp             BCCSSHHHHHHHHHH---CT-TCEEE-SSCTTTHHHHHTSCCCCCSEEEGGGCGGGSCEEEETTEEEEETTCBHHHHHHH
T ss_pred             CCcccHHHHHHHHHH---CC-CCEEE-EcCChHHHHhhccccCCCceEeecccccceeEEeeccccccccchhHHHHHHh
Confidence            479999999988874   22 46677 66665421110 01122578999887655455555678999999999999887


Q ss_pred             HHHCCCcc----ccc--ccc-cccchhhhhccCCcCCCccCCCCchhcceeEEEEEeeCCC
Q 009304           93 SAKAGLAL----PYT--PYW-WGLTIGGLIGTGAHGSSLWGRGSSIHDYVVELRIVSSGGP  146 (538)
Q Consensus        93 l~~~Gl~l----~~~--~~~-~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~~l~vV~~~G~  146 (538)
                      +.+.--.|    ...  +.+ +..||||.++++.-.+-+.   ..+-..=-.+++..++|+
T Consensus        78 ~~~~~p~L~~a~~~ia~~qIRn~aTiGGNl~~a~p~~D~~---~~L~Al~A~v~l~~~~g~  135 (167)
T d1jroa4          78 AEGPHPALAGLLRRFASEQVRQVATIGGNIANGSPIGDGP---PALIAMGASLTLRRGQER  135 (167)
T ss_dssp             HTTTCHHHHHHHHTSSCHHHHTTCBHHHHHHHCCTTCSHH---HHHHHTTCEEEEEBTTBC
T ss_pred             hhhhHHHHHHHHHhhcCHhhheeeEeccceeecccccccH---HHHHHhheEEEEEcCCce
Confidence            65432111    111  112 3369999998766553321   112222224456666665


No 14 
>d1rm6b2 d.145.1.3 (B:1-216) 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, N-terminal domain {Thauera aromatica [TaxId: 59405]}
Probab=96.57  E-value=0.0014  Score=59.95  Aligned_cols=101  Identities=16%  Similarity=0.203  Sum_probs=64.8

Q ss_pred             cCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCC-----CCCCccCCCCcEEEEcCCCCCeeEEeC-CCCEEEEeCC
Q 009304           10 AADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSI-----PKLVCPDGQDGLLISTKYLNKIINIDT-EAMTITMESG   83 (538)
Q Consensus        10 p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~-----~~~~~~~~~~gv~Idl~~ln~v~~vd~-~~~~vtv~aG   83 (538)
                      +-.+++|+|.+|+.++++   +.  +-+++ .||.+.     .+...+    ..+||++++..+-.|.. +++.++++|+
T Consensus         6 ~F~y~~P~sl~EA~~ll~---~~--~a~~l-AGGTdL~~~~k~~~~~p----~~lIdl~~I~eL~~I~~~~dg~l~IGA~   75 (216)
T d1rm6b2           6 DFRTHRPATLADAVNALA---AE--ATLPL-GAGTDLLPNLRRGLGHP----AALVDLTGIDGLATISTLADGSLRIGAG   75 (216)
T ss_dssp             CCEEECCSSHHHHHHHTT---ST--TEEEE-SSCTTHHHHHHTTSCCC----SEEEECTTSTTTTCEEECTTSCEEEETT
T ss_pred             CceEeCCCCHHHHHHHhc---CC--CCeEE-ECCccHHHHHhccccCc----cceechhhhhhhhccccccCCcEEEeee
Confidence            457899999999998874   22  35677 566543     122333    68999988765544543 3457999999


Q ss_pred             CCHHHHHH--HHHHC--CCc--ccc--cccc-cccchhhhhccCCc
Q 009304           84 VTLRQIIG--ESAKA--GLA--LPY--TPYW-WGLTIGGLIGTGAH  120 (538)
Q Consensus        84 v~l~~L~~--~l~~~--Gl~--l~~--~~~~-~~~tvGG~i~tg~h  120 (538)
                      +++.+|.+  .+.++  .|+  +..  .+.+ +-.||||.|+++..
T Consensus        76 vT~~~l~~~~~l~~~~p~L~~a~~~~as~qIRN~aTiGGNl~~~s~  121 (216)
T d1rm6b2          76 ATLEAIAEHDAIRTTWPALAQAAESVAGPTHRAAATLGGNLCQDTR  121 (216)
T ss_dssp             CBHHHHHHCHHHHHHSHHHHHHHHHSSCHHHHHHCBHHHHHTCCCB
T ss_pred             eehHHhhhhhhhhhhhHHHHHHHHHHCCHHHhCCeecccccccCCC
Confidence            99999975  33332  111  111  1222 23699999998654


No 15 
>d1n62c2 d.145.1.3 (C:1-177) Carbon monoxide (CO) dehydrogenase flavoprotein, N-terminal domain {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]}
Probab=96.53  E-value=0.0028  Score=56.23  Aligned_cols=159  Identities=13%  Similarity=0.181  Sum_probs=91.1

Q ss_pred             cCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCCCCCC-ccCCCCcEEEEcCCCCCeeEEeCCCCEEEEeCCCCHHH
Q 009304           10 AADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSIPKLV-CPDGQDGLLISTKYLNKIINIDTEAMTITMESGVTLRQ   88 (538)
Q Consensus        10 p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~~~~~-~~~~~~gv~Idl~~ln~v~~vd~~~~~vtv~aGv~l~~   88 (538)
                      +-.+++|+|.+|+.++++....   ..+++ .||....... ........+||++++..+..|..+...+++++++++.+
T Consensus         5 ~f~y~~P~sl~ea~~ll~~~~~---~a~~l-aGGT~l~~~~~~~~~~~~~lidl~~i~el~~I~~~~~~~~iGa~~t~~~   80 (177)
T d1n62c2           5 SFDYHRPKSIADAVALLTKLGE---DARPL-AGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIREEGTDVVIGAMTTQHA   80 (177)
T ss_dssp             CCEEECCSSHHHHHHHHHHHGG---GEEEE-SSCTTHHHHHHTTSCCCSEEEECTTCGGGSCEEEETTEEEEETTCBHHH
T ss_pred             CcceeCCCCHHHHHHHHHhcCC---CCeEE-EecCchhhhhhhccCCccccccccccccceEEeecCceEEEeccccHHH
Confidence            4678999999999988765422   45677 5665421100 00112268999999877656666777899999999999


Q ss_pred             HHHH--HHHCCC----cccccc--cc-cccchhhhhccCCcCCCccCCCCchhcceeEEEEEeeCCCCCCcccEEEcCCC
Q 009304           89 IIGE--SAKAGL----ALPYTP--YW-WGLTIGGLIGTGAHGSSLWGRGSSIHDYVVELRIVSSGGPDDGYAKVRVLNEN  159 (538)
Q Consensus        89 L~~~--l~~~Gl----~l~~~~--~~-~~~tvGG~i~tg~hGs~~~~~~G~~~d~V~~l~vV~~~G~~~g~~~v~~~~~~  159 (538)
                      +...  +.++--    ++....  .+ +-.||||.|+++...+-..   ..+--.=-.+++..++|+       +++.- 
T Consensus        81 ~~~~~~~~~~~p~l~~a~~~~as~qIRn~aTiGGNi~~a~p~~D~~---~~Llal~A~v~l~~~~G~-------R~vpl-  149 (177)
T d1n62c2          81 LIGSDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAANGDPGNDMP---ALMQCLGAAYELTGPEGA-------RIVAA-  149 (177)
T ss_dssp             HHHCHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCCTTCSHH---HHHHHHTCEEEEEETTEE-------EEEEH-
T ss_pred             hhccHhHhhhccHHHHHhhhcCChhHeEEEEeecceecccccchhH---HHHHHhcceeEEecCCce-------EEEEH-
Confidence            8742  333221    122222  22 2369999999887654331   111111124456667774       22211 


Q ss_pred             ccchhhh--hcCCCCeEEEEEEEEEeE
Q 009304          160 DQDLDAA--KVSLGVLGVISQVTLKLQ  184 (538)
Q Consensus       160 ~~~f~a~--~~s~G~lGVIt~vtl~l~  184 (538)
                       ++|...  +..+.-=-||++|.+-.-
T Consensus       150 -~dF~~g~~~t~l~~~Eii~~I~iP~p  175 (177)
T d1n62c2         150 -RDYYQGAYFTAIEPGELLTAIRIPVP  175 (177)
T ss_dssp             -HHHEEETTEESCCTTCEEEEEEEECC
T ss_pred             -HHhcccccccccCCCCeEEEEEecCC
Confidence             134321  122322248888887543


No 16 
>d1wvfa1 d.58.32.1 (A:243-521) Flavoprotein subunit of p-cresol methylhydroxylase {Pseudomonas putida [TaxId: 303]}
Probab=93.63  E-value=0.065  Score=50.21  Aligned_cols=110  Identities=15%  Similarity=0.097  Sum_probs=66.5

Q ss_pred             EEEEeccchHHHHHHHHHHHHhCcccccCceeecceEEEEecCCCCCCCCCCCeEEEEEeE-eccCCCCCccchHHHHHH
Q 009304          346 TFSIRLSVVKSFIDDIQKLIKLEPKALCGLELYNGILMRYVKASSAYLGKQEDSLDFDITY-YRSKDPMTPRLYEDILEE  424 (538)
Q Consensus       346 E~~vP~~~~~~~i~dv~~l~~~~~~~~~~~~~~~pi~iRfv~~s~a~Ls~~~d~~~i~i~~-y~~~~~~~p~~~~~~~~e  424 (538)
                      .+.+|.+++.++++.++++++++.-..+       +   |...       +...+++.+.. +...++.....+.+++++
T Consensus       156 ~vp~~~s~l~~~~~~~~~~~~~~g~~~~-------~---~~H~-------gdgnlh~~v~~~~~~~~~~~~~~~~~~~~~  218 (279)
T d1wvfa1         156 VSEARGSECKKQAAMAKRVLHKYGLDYV-------A---EFIV-------APRDMHHVIDVLYDRTNPEETKRADACFNE  218 (279)
T ss_dssp             EEESCHHHHHHHHHHHHHHHHHTTCCCC-------E---EEEE-------CSSEEEEEEEEEEETTCHHHHHHHHHHHHH
T ss_pred             eecCCHHHHHHHHHHHHHHHHHhCCCeE-------E---EEec-------CCceEEEEeecccCCCCHHHHHHHHHHHHH
Confidence            3444558999999999999997653211       1   1111       12356655543 333343333446677778


Q ss_pred             HHHHHHhhcCCeeccCCCCCcchhhHHHhC-C-CHHHHHHHHHhcCCCCCCCc
Q 009304          425 IEQLAVFKYGGFPHWGKNRNLVFDGVIKKY-K-NAGEFFKVKDKYDPLGLFSS  475 (538)
Q Consensus       425 ie~~~~~k~gGrPHWgK~~~~~~~~~~~~Y-p-~~~~F~~~r~~~DP~g~F~n  475 (538)
                      +-+. ..++||-+| |=.... .+.+...| | .++-+.++|+.+||+|++..
T Consensus       219 l~~~-~~~~Gg~eH-GiG~~~-~~~l~~~~g~~~~~lm~~iK~alDP~~IlNP  268 (279)
T d1wvfa1         219 LLDE-FEKEGYAVY-RVNTRF-QDRVAQSYGPVKRKLEHAIKRAVDPNNILAP  268 (279)
T ss_dssp             HHHH-HHHTTCCBS-CCCGGG-HHHHHHHTCHHHHHHHHHHHHHHCTTCCBCT
T ss_pred             HHHH-HHHhCCCCC-CCcHHH-HHHHHHHhCHHHHHHHHHHHHHhCCCcCCCC
Confidence            7776 468999433 322111 23355666 3 45667899999999999875


No 17 
>d1e8ga1 d.58.32.1 (A:274-560) Vanillyl-alcohol oxidase {Fungus (Penicillium simplicissimum) [TaxId: 69488]}
Probab=91.82  E-value=0.17  Score=47.24  Aligned_cols=116  Identities=9%  Similarity=0.027  Sum_probs=65.6

Q ss_pred             cEEEEEEEEeccc-hHHHHHHHHHHHHhCcccccCceeecceEEEEecCCCCCCCCCCCeEEEEEe-EeccCCCCCccch
Q 009304          341 FFHQTTFSIRLSV-VKSFIDDIQKLIKLEPKALCGLELYNGILMRYVKASSAYLGKQEDSLDFDIT-YYRSKDPMTPRLY  418 (538)
Q Consensus       341 ~~~~~E~~vP~~~-~~~~i~dv~~l~~~~~~~~~~~~~~~pi~iRfv~~s~a~Ls~~~d~~~i~i~-~y~~~~~~~p~~~  418 (538)
                      ..+..+.++|.++ +.++++.++++.+++.-..       .+.  + ..       +...+++.+. .|...++.....+
T Consensus       149 ~~~~~d~~~~~~~~l~~~~~~~~~~~~~~g~~~-------~~~--~-H~-------gdg~~h~~v~~~~d~~~~~~~~~~  211 (287)
T d1e8ga1         149 HLFFSPIAKVSGEDAMMQYAVTKKRCQEAGLDF-------IGT--F-TV-------GMREMHHIVCIVFNKKDLIQKRKV  211 (287)
T ss_dssp             EEEECBEECSSHHHHHHHHHHHHHHHHHHTCCC-------CEE--E-EE-------CSSCEEEEEEEEEETTCHHHHHHH
T ss_pred             eeeeeceeccChHHHHHHHHHHHHHHHHcCCCe-------EEE--E-EE-------cCCceeEEEEeecCCCCHHHHHHH
Confidence            3445678888875 8999999999998653211       110  1 11       1124444433 2333343333446


Q ss_pred             HHHHHHHHHHHHhhcCCeeccCCCCCcchhhHHHhC----C-CHHHHHHHHHhcCCCCCCCch
Q 009304          419 EDILEEIEQLAVFKYGGFPHWGKNRNLVFDGVIKKY----K-NAGEFFKVKDKYDPLGLFSSE  476 (538)
Q Consensus       419 ~~~~~eie~~~~~k~gGrPHWgK~~~~~~~~~~~~Y----p-~~~~F~~~r~~~DP~g~F~n~  476 (538)
                      ..+++++-+. ..++||-+.  -.|........-.+    | .+.-+.++|+.|||+|+|...
T Consensus       212 ~~~~~~l~~~-~~~~GGsis--~eHg~G~~k~~~~~~~~~~~~~~l~~~iK~a~DP~gIlNPG  271 (287)
T d1e8ga1         212 QWLMRTLIDD-CAANGWGEY--RTHLAFMDQIMETYNWNNSSFLRFNEVLKNAVDPNGIIAPG  271 (287)
T ss_dssp             HHHHHHHHHH-HHHTTCCBS--CCCGGGHHHHHHHTCHHHHHHHHHHHHHHHHHCTTCCBCTT
T ss_pred             HHHHHHHHHH-HHHcCCeEE--EeCccHHHHHHHHHhhcCHHHHHHHHHHHHHhCCCcCCCCC
Confidence            6677777666 578999544  11111111111111    2 246778999999999999863


No 18 
>d1f0xa1 d.58.32.2 (A:274-567) D-lactate dehydrogenase {Escherichia coli [TaxId: 562]}
Probab=77.17  E-value=1.2  Score=41.65  Aligned_cols=103  Identities=14%  Similarity=0.106  Sum_probs=62.7

Q ss_pred             EEEEEEEEeccchHHHHHHHHHHHHhCcccccCceeecceEEEEecCCCCCCCCCCCeEEEEEeEeccCCCCCccchHHH
Q 009304          342 FHQTTFSIRLSVVKSFIDDIQKLIKLEPKALCGLELYNGILMRYVKASSAYLGKQEDSLDFDITYYRSKDPMTPRLYEDI  421 (538)
Q Consensus       342 ~~~~E~~vP~~~~~~~i~dv~~l~~~~~~~~~~~~~~~pi~iRfv~~s~a~Ls~~~d~~~i~i~~y~~~~~~~p~~~~~~  421 (538)
                      .....+++|++..+ +++++.+.++....          ..+-|...       +...+++++..-...      ..+.+
T Consensus       182 ~~~~DisvP~~~~~-~~~~~~~~~~~~~~----------~~~~fGH~-------GDGNlH~~i~~~~~~------~~~~~  237 (294)
T d1f0xa1         182 ILALDIALRRNDTE-WYEHLPPEIDSQLV----------HKLYYGHF-------MCYVFHQDYIVKKGV------DVHAL  237 (294)
T ss_dssp             EEEEEEECCTTCSC-CSCCCCHHHHTTEE----------EEEEEEET-------TTTEEEEEEEEETTC------CHHHH
T ss_pred             ceeecccchHhHHH-HHHHhHHHHhcccc----------eeeccccc-------ccccceeeeccCCCc------CHHHH
Confidence            45678999998764 44555555553111          11234333       234778877654432      24567


Q ss_pred             HHHHHHHHHhhcCCeeccCCCCCcchhhHHHhCCCHHHHHHHHHhcCCCCCCCch
Q 009304          422 LEEIEQLAVFKYGGFPHWGKNRNLVFDGVIKKYKNAGEFFKVKDKYDPLGLFSSE  476 (538)
Q Consensus       422 ~~eie~~~~~k~gGrPHWgK~~~~~~~~~~~~Yp~~~~F~~~r~~~DP~g~F~n~  476 (538)
                      .++|-++ +.++||---  =.|.     +-..|..+..+.++|+.+||+|+|...
T Consensus       238 ~~~i~~~-v~~~GGsiS--aEHG-----IG~~k~a~~~m~~iK~~lDP~nilNPG  284 (294)
T d1f0xa1         238 KEQMLEL-LQQRGAQYP--AEHN-----VGHLYKAPETLQKFYRENDPTNSMNPG  284 (294)
T ss_dssp             HHHHHHH-HHHTTCBSC--SSSC-----CTTTSCCCHHHHHHHHHHCTTCCBSTT
T ss_pred             HHHHHHH-HHHcCCEEE--Eecc-----CcchhccHHHHHHHHHhcCCCCCCCCC
Confidence            7888887 578998431  0111     223344457899999999999999753


No 19 
>d1n8va_ a.118.21.1 (A:) Chemosensory protein Csp2 {Cabbage moth (Mamestra brassicae) [TaxId: 55057]}
Probab=76.81  E-value=0.59  Score=36.62  Aligned_cols=29  Identities=28%  Similarity=0.520  Sum_probs=25.3

Q ss_pred             HHHhCCCHHHHHHHHHhcCCCCCCCchhhHh
Q 009304          450 VIKKYKNAGEFFKVKDKYDPLGLFSSEWTDQ  480 (538)
Q Consensus       450 ~~~~Yp~~~~F~~~r~~~DP~g~F~n~~~~~  480 (538)
                      +.+.||  +.|.++.++|||+|.+...|-+.
T Consensus        71 l~~~~p--~~w~~l~~KYDP~g~y~~k~~~~   99 (101)
T d1n8va_          71 LIKNEI--EIWRELTAKYDPTGNWRKKYEDR   99 (101)
T ss_dssp             HHHHCH--HHHHHHHHHHCTTCSSHHHHHHH
T ss_pred             HHHcCc--HHHHHHHHHHCcCchHHHHHHHH
Confidence            677888  89999999999999998888664


No 20 
>d2o1ra1 d.145.1.4 (A:1-78) Hypothetical protein HI0107 {Haemophilus influenzae [TaxId: 727]}
Probab=48.23  E-value=12  Score=26.94  Aligned_cols=41  Identities=17%  Similarity=0.169  Sum_probs=32.1

Q ss_pred             CCCEEEEeCCCCHHHHHHHHHHCCCcccccccccccchhhhhccCCc
Q 009304           74 EAMTITMESGVTLRQIIGESAKAGLALPYTPYWWGLTIGGLIGTGAH  120 (538)
Q Consensus        74 ~~~~vtv~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~tvGG~i~tg~h  120 (538)
                      ..++..|.+.+.+.||.+.+   |+.+|...   .-|+||++..-..
T Consensus         4 ~Dg~~~v~G~~~l~dl~~~l---~~~l~~~~---~~Ti~G~v~~~lg   44 (78)
T d2o1ra1           4 SDGSMIIDGSANLRDLNKMF---NWELDTED---ARTFNGLILEHLE   44 (78)
T ss_dssp             TTSCEEEETTCBHHHHHHHH---CCCCCCSS---CSBHHHHHHHHCS
T ss_pred             cCCEEEEEeeCCHHHHHHHH---CCCCCCcc---chHHHHHHHHHhC
Confidence            34688999999999999987   67777532   3599999986653


No 21 
>d2plia1 d.145.1.4 (A:5-88) Uncharacterized protein NMB0537 {Neisseria meningitidis [TaxId: 487]}
Probab=45.63  E-value=20  Score=26.10  Aligned_cols=47  Identities=17%  Similarity=0.133  Sum_probs=35.1

Q ss_pred             CeeEEeCCCCEEEEeCCCCHHHHHHHHHHCCCcccccccccccchhhhhccCCcC
Q 009304           67 KIINIDTEAMTITMESGVTLRQIIGESAKAGLALPYTPYWWGLTIGGLIGTGAHG  121 (538)
Q Consensus        67 ~v~~vd~~~~~vtv~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~tvGG~i~tg~hG  121 (538)
                      .|..++.  +...|.+.+.+.||.+.+   |+.+|..   ...||||++..-...
T Consensus         4 ~I~~~~~--~~~~v~g~~~l~dl~~~~---~~~l~~~---~~~TigG~i~~~l~~   50 (84)
T d2plia1           4 NIHAVSS--ERWRIHAATEIEDINTFF---GTEYSSE---EADTIGGLVIQELGH   50 (84)
T ss_dssp             SEEEEET--TEEEEETTCBHHHHHHHH---CCCCCCS---SCCBHHHHHHHHHSS
T ss_pred             ceEEeCC--CEEEEEecCCHHHHHHHh---CCCCCcc---ccHHHHHHHHHHhCc
Confidence            3455554  679999999999999888   6777753   346999999765533


No 22 
>d2oaia1 d.145.1.4 (A:5-91) Hemolysin TlyC {Xylella fastidiosa [TaxId: 2371]}
Probab=42.74  E-value=14  Score=27.24  Aligned_cols=44  Identities=14%  Similarity=0.064  Sum_probs=29.3

Q ss_pred             CCCEEEEeCCCCHHHHHHHHHHCCCcccccccccccchhhhhccCCc
Q 009304           74 EAMTITMESGVTLRQIIGESAKAGLALPYTPYWWGLTIGGLIGTGAH  120 (538)
Q Consensus        74 ~~~~vtv~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~tvGG~i~tg~h  120 (538)
                      +.++..|.+.+.+.+|.+.+   |+.+|....-.--||||++..-..
T Consensus         9 ~dg~~~v~G~~~l~dl~~~l---~~~l~~~e~~~~~Tl~G~i~~~lg   52 (87)
T d2oaia1           9 EDGSFLIDGTLPIEELREVL---GAELPDGEENNYHTLAGMCISYFG   52 (87)
T ss_dssp             TTSCEEEETTCBHHHHHHHH---TC-------CCCSBHHHHHHHHHS
T ss_pred             CCCEEEEEecCCHHHHHHHH---CCCCCcccccccccHHHHHHHHhC
Confidence            45789999999999999886   566765544334699999976653


No 23 
>d1f0xa1 d.58.32.2 (A:274-567) D-lactate dehydrogenase {Escherichia coli [TaxId: 562]}
Probab=41.03  E-value=0.58  Score=43.89  Aligned_cols=56  Identities=14%  Similarity=-0.117  Sum_probs=19.4

Q ss_pred             CCCchhcceeEEEEEeeC-CCCCCcccEEEcC-----C-CccchhhhhcCCCCeEEEEEEEEEeEecCc
Q 009304          127 RGSSIHDYVVELRIVSSG-GPDDGYAKVRVLN-----E-NDQDLDAAKVSLGVLGVISQVTLKLQPLFK  188 (538)
Q Consensus       127 ~~G~~~d~V~~l~vV~~~-G~~~g~~~v~~~~-----~-~~~~f~a~~~s~G~lGVIt~vtl~l~p~~~  188 (538)
                      .++.++++|++...++|. |+      +....     . ...|...+.+++|++|++|.++||+.|...
T Consensus        15 ~l~~iR~~vL~~~~~LP~sGE------~~h~~~~~~~~~~G~dt~l~IgseGT~~i~t~~~lK~~~~~~   77 (294)
T d1f0xa1          15 VLTEIRRHILANFENLPVAGE------YMHRDIYDIAEKYGKDTFLMIDKLGTDKMPFFFNLKGRTDAM   77 (294)
T ss_dssp             HHHHHHHHHHHHCSSCCSEEE------EEEHHHHHHHC-------------------------------
T ss_pred             HHHHHHHHHHhccccCCccee------eeccchhHHHHHHhHHHHHHHHHhcccchHHHHHHHhhhhHH
Confidence            367899999999999995 98      54321     1 122444778999999999999999987654


No 24 
>d2p3ha1 d.145.1.4 (A:5-102) Uncharacterized protein Cgl1194/Cg1349 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=37.88  E-value=26  Score=26.36  Aligned_cols=41  Identities=22%  Similarity=0.191  Sum_probs=32.0

Q ss_pred             CCEEEEeCCCCHHHHHHHHHHCCCcccccccccccchhhhhccCCcC
Q 009304           75 AMTITMESGVTLRQIIGESAKAGLALPYTPYWWGLTIGGLIGTGAHG  121 (538)
Q Consensus        75 ~~~vtv~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~tvGG~i~tg~hG  121 (538)
                      .++..|.+-+++.+|.+.+   |+.+|..   ...|+||++.....-
T Consensus         8 ~~~~~v~G~~~l~dl~~~l---~~~l~~~---~~~Tl~G~~~~~lg~   48 (98)
T d2p3ha1           8 PDKWLIDGDTPLDEVERAI---GYELPEG---DYETISGLLFDHANA   48 (98)
T ss_dssp             TTEEEEETTCBHHHHHHHH---TSCCCCS---SCCBHHHHHHHHHCS
T ss_pred             CCEEEEEeccCHHHHHHHH---CCCCCCC---CccCHHHHHHHHHCc
Confidence            3679999999999999988   6777643   336999999866543


No 25 
>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=37.67  E-value=24  Score=24.70  Aligned_cols=37  Identities=30%  Similarity=0.393  Sum_probs=30.7

Q ss_pred             CCCCCe--eEEeCCCCEEEEeCCCCHHHHHHHHHHCCCc
Q 009304           63 KYLNKI--INIDTEAMTITMESGVTLRQIIGESAKAGLA   99 (538)
Q Consensus        63 ~~ln~v--~~vd~~~~~vtv~aGv~l~~L~~~l~~~Gl~   99 (538)
                      .++.+|  +.+|...+.++|+.=+...+|.+++++.|+.
T Consensus        28 ~~~~gV~~v~vdl~~~~v~V~~~~~~~~i~~~I~~~G~~   66 (72)
T d1qupa2          28 KNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKD   66 (72)
T ss_dssp             TTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCC
T ss_pred             hcCCCeeEEEEECCCCEEEEEeeCCHHHHHHHHHHhCCC
Confidence            445554  4578889999999889999999999999975


No 26 
>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]}
Probab=37.21  E-value=19  Score=24.92  Aligned_cols=32  Identities=19%  Similarity=0.346  Sum_probs=28.1

Q ss_pred             eEEeCCCCEEEEeCCCCHHHHHHHHHHCCCcc
Q 009304           69 INIDTEAMTITMESGVTLRQIIGESAKAGLAL  100 (538)
Q Consensus        69 ~~vd~~~~~vtv~aGv~l~~L~~~l~~~Gl~l  100 (538)
                      +.+|..+++++|+.-+...+|.+++.+.|+..
T Consensus        30 v~v~~~~~~v~V~~~~~~~~i~~~I~~~Gy~a   61 (66)
T d1fe0a_          30 YDIDLPNKKVCIESEHSMDTLLATLKKTGKTV   61 (66)
T ss_dssp             EEEETTTTEEEEEESSCHHHHHHHHHTTTSCE
T ss_pred             EEEEcCCCEEEEEeeCCHHHHHHHHHHhCCeE
Confidence            46788889999999999999999999999753


No 27 
>d2plsa1 d.145.1.4 (A:345-428) Hypothetical protein CT0541 {Chlorobium tepidum [TaxId: 1097]}
Probab=36.29  E-value=28  Score=25.15  Aligned_cols=46  Identities=13%  Similarity=-0.018  Sum_probs=33.0

Q ss_pred             CCCCEEEEeCCCCHHHHHHHHHHCCCcccccccc-cccchhhhhccCCcC
Q 009304           73 TEAMTITMESGVTLRQIIGESAKAGLALPYTPYW-WGLTIGGLIGTGAHG  121 (538)
Q Consensus        73 ~~~~~vtv~aGv~l~~L~~~l~~~Gl~l~~~~~~-~~~tvGG~i~tg~hG  121 (538)
                      .+.++..|.+-+.+.+|.+.+   |+.+|..... .--|+||++..-...
T Consensus         4 ~~dg~~~v~G~~~l~dl~~~l---~~~~~~~~e~~~~~Tl~G~i~~~lg~   50 (84)
T d2plsa1           4 REDGSWLLDGLIAVPELKDTL---GLRAVPEEEKGVYHTLSGMIMWLLGR   50 (84)
T ss_dssp             CTTSCEEEETTCBHHHHHHHH---TCSCCTTTTSCSCCBHHHHHHHHHTS
T ss_pred             ecCCeEEEEccCCHHHHHHHH---CCCCCcccccccccCHHHHHHHHhCc
Confidence            356788999999999999877   4555544332 236999999766543


No 28 
>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=35.44  E-value=20  Score=25.24  Aligned_cols=32  Identities=19%  Similarity=0.281  Sum_probs=28.2

Q ss_pred             eEEeCCCCEEEEeCCCCHHHHHHHHHHCCCcc
Q 009304           69 INIDTEAMTITMESGVTLRQIIGESAKAGLAL  100 (538)
Q Consensus        69 ~~vd~~~~~vtv~aGv~l~~L~~~l~~~Gl~l  100 (538)
                      +++|...++|+|+.-+...+|.+.+.+.|+..
T Consensus        35 v~v~~~~~~v~V~~~~~~~~i~~~i~~~G~~~   66 (72)
T d1cc8a_          35 IDISLEKQLVDVYTTLPYDFILEKIKKTGKEV   66 (72)
T ss_dssp             EEEETTTTEEEEEESSCHHHHHHHHHTTSSCE
T ss_pred             EEEECCCCEEEEeecCCHHHHHHHHHHHCCcc
Confidence            46778889999999999999999999999753


No 29 
>d2rk5a1 d.145.1.4 (A:5-88) Putative hemolysin SMU1693 {Streptococcus mutans [TaxId: 1309]}
Probab=33.49  E-value=21  Score=25.81  Aligned_cols=40  Identities=23%  Similarity=0.041  Sum_probs=31.2

Q ss_pred             CCEEEEeCCCCHHHHHHHHHHCCCcccccccccccchhhhhccCCc
Q 009304           75 AMTITMESGVTLRQIIGESAKAGLALPYTPYWWGLTIGGLIGTGAH  120 (538)
Q Consensus        75 ~~~vtv~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~tvGG~i~tg~h  120 (538)
                      .++..|.+-+.+.|+.+.+   |+.+|..   .--||||++..-..
T Consensus         5 d~~~~v~G~~~l~dl~~~l---~~~l~~~---~~dTlgG~v~~~lg   44 (84)
T d2rk5a1           5 DNTYIVLGTMTLNDFNEYF---ETDLESD---NVDTIAGFYLTGVG   44 (84)
T ss_dssp             TTEEEEETTSBHHHHHHHH---TCCCCCT---TCCBHHHHHHHHHC
T ss_pred             CCEEEEEeeeEHHHHHHHh---CCCcccc---cchhHHHHHHHHhC
Confidence            4678999999999999998   5777643   23599999986553


No 30 
>d1mcvi_ g.3.2.1 (I:) Trypsin inhibitor {Jumping cucumber (Ecballium elaterium) [TaxId: 3679]}
Probab=32.12  E-value=7.5  Score=21.70  Aligned_cols=23  Identities=43%  Similarity=1.014  Sum_probs=17.1

Q ss_pred             CCCcceeecCCCCCCCCCCCccccCC
Q 009304          495 CALEGLCICSQDIHCAPTKGYLCRPG  520 (538)
Q Consensus       495 c~~~~~c~c~~~~hc~~~~~~~c~~~  520 (538)
                      |+||-+ .|..|+.|-  .|-.|-|-
T Consensus         2 ctleym-~c~~dsdcl--agcvcgpn   24 (28)
T d1mcvi_           2 CTLEYM-RCKQDSDCL--AGCVCGPN   24 (28)
T ss_dssp             EECCCC-BCSSGGGSC--TTCCBCTT
T ss_pred             ccchhh-hcccccccc--ccceecCC
Confidence            566654 688999998  68888774


No 31 
>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=31.28  E-value=38  Score=23.45  Aligned_cols=39  Identities=15%  Similarity=0.145  Sum_probs=28.5

Q ss_pred             cCCCCCee--EEeCCCCEEEEe--CCCCHHHHHHHHHHCCCcc
Q 009304           62 TKYLNKII--NIDTEAMTITME--SGVTLRQIIGESAKAGLAL  100 (538)
Q Consensus        62 l~~ln~v~--~vd~~~~~vtv~--aGv~l~~L~~~l~~~Gl~l  100 (538)
                      +.++.+|.  ++|-..++++|.  +.++..+|.+.+.+.|+..
T Consensus        24 l~~~~gV~~v~V~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~a   66 (72)
T d2ggpb1          24 LRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDC   66 (72)
T ss_dssp             HTTSTTEEEEEECTTTCEEEEEECSSCCHHHHHHHHHHTTCCC
T ss_pred             HhcCCCceEEEEECCCCEEEEEECCCCCHHHHHHHHHHhCCCe
Confidence            45556653  455666666655  8899999999999999753


No 32 
>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]}
Probab=30.72  E-value=32  Score=23.30  Aligned_cols=32  Identities=22%  Similarity=0.320  Sum_probs=28.0

Q ss_pred             eEEeCCCCEEEEeCCCCHHHHHHHHHHCCCcc
Q 009304           69 INIDTEAMTITMESGVTLRQIIGESAKAGLAL  100 (538)
Q Consensus        69 ~~vd~~~~~vtv~aGv~l~~L~~~l~~~Gl~l  100 (538)
                      +.+|..+++|+|+.=+...+|.+++.+.|+..
T Consensus        32 v~v~~~~~~v~v~~~~~~~~i~~~i~~~GY~v   63 (64)
T d1sb6a_          32 VQVDLTSKKVTITSALGEEQLRTAIASAGHEV   63 (64)
T ss_dssp             EEEETTTTEEEEESSSCHHHHHHHHHHHCCCC
T ss_pred             EEccCCCCEEEEccCCCHHHHHHHHHHcCCCC
Confidence            57788889999999899999999999999753


No 33 
>d2r2za1 d.145.1.4 (A:5-88) Putative hemolysin EF0700 {Enterococcus faecalis [TaxId: 1351]}
Probab=30.25  E-value=26  Score=25.39  Aligned_cols=39  Identities=10%  Similarity=-0.025  Sum_probs=30.0

Q ss_pred             CCEEEEeCCCCHHHHHHHHHHCCCcccccccccccchhhhhccCC
Q 009304           75 AMTITMESGVTLRQIIGESAKAGLALPYTPYWWGLTIGGLIGTGA  119 (538)
Q Consensus        75 ~~~vtv~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~tvGG~i~tg~  119 (538)
                      .++..|.+-+.+.||.+.+   |+.+|..   ..-|+||++..-.
T Consensus         8 ~~~~~v~G~~~l~dl~~~l---~~~l~~~---~~~TigG~i~~~l   46 (84)
T d2r2za1           8 DNEYLVQGRMLIDEFNEVF---ETDLHMS---DVDTMAGYLITAL   46 (84)
T ss_dssp             TTEEEEETTSBHHHHHHHH---TCCCCCT---TCCBHHHHHHHHH
T ss_pred             CCEEEEEeeCCHHHHHHHH---CcCCCCc---cchhHHHHHHHHh
Confidence            3678899999999999887   5667642   2369999997544


No 34 
>d1rlka_ c.131.1.1 (A:) Hypothetical protein TA0108 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=30.18  E-value=38  Score=26.28  Aligned_cols=38  Identities=11%  Similarity=-0.021  Sum_probs=33.7

Q ss_pred             CCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCC
Q 009304            8 CKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHS   45 (538)
Q Consensus         8 ~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS   45 (538)
                      ..+..++...+++++.++.+.|.+.|++..++.-+|++
T Consensus        49 g~~KIvl~v~~e~~L~~l~~~a~~~~l~~~~v~DAG~T   86 (116)
T d1rlka_          49 GQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGYT   86 (116)
T ss_dssp             TCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCSS
T ss_pred             CceEEEEEeCCHHHHHHHHHHHHHCCCCEEEEECCCCc
Confidence            35678899999999999999999999998888689997


No 35 
>d1emxa_ g.3.6.2 (A:) Heteropdatoxin 2, hptx2 {Giant crab spider (Heteropoda venatoria) [TaxId: 152925]}
Probab=26.85  E-value=13  Score=21.14  Aligned_cols=14  Identities=43%  Similarity=1.412  Sum_probs=10.5

Q ss_pred             cCCCCCCCCCCCcccc
Q 009304          503 CSQDIHCAPTKGYLCR  518 (538)
Q Consensus       503 c~~~~hc~~~~~~~c~  518 (538)
                      |+....|-  .||.||
T Consensus        10 c~t~adcc--eg~vcr   23 (30)
T d1emxa_          10 CDTNADCC--EGYVCR   23 (30)
T ss_dssp             TCSTTCCC--TTBCCS
T ss_pred             CCCCcchh--hhhhhh
Confidence            56666777  699996


No 36 
>d3erja1 c.131.1.1 (A:2-117) Hypothetical protein AF2095 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=24.94  E-value=56  Score=25.24  Aligned_cols=39  Identities=10%  Similarity=-0.041  Sum_probs=33.9

Q ss_pred             CCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCC
Q 009304            8 CKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSI   46 (538)
Q Consensus         8 ~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~   46 (538)
                      .....++.-.+++++.++.+.|.+.|++..++.-+||+.
T Consensus        46 g~~KIvl~v~~e~~L~~l~~~a~~~~l~~~~i~DAG~Te   84 (116)
T d3erja1          46 GQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLTE   84 (116)
T ss_dssp             TCCEEEEEESSHHHHHHHHHHHHHHTCCEEEECCTTCSS
T ss_pred             CceEEEEEeCCHHHHHHHHHHHHHCCCCEEEEEcCCCcc
Confidence            346678889999999999999999999988886789873


No 37 
>d1t2ya_ g.46.1.1 (A:) Metallothionein {Neurospora crassa [TaxId: 5141]}
Probab=24.07  E-value=18  Score=19.65  Aligned_cols=19  Identities=37%  Similarity=0.747  Sum_probs=13.1

Q ss_pred             ceeecCCCCCCCCCCCccc
Q 009304          499 GLCICSQDIHCAPTKGYLC  517 (538)
Q Consensus       499 ~~c~c~~~~hc~~~~~~~c  517 (538)
                      |.|-||-.+.|.-..|-.|
T Consensus         1 gdcgcsgasscncgsgcsc   19 (26)
T d1t2ya_           1 GDCGCSGASSCNCGSGCSC   19 (26)
T ss_dssp             CCCSCSSTTTCCCSSSCCS
T ss_pred             CCcccCccccccCCCCccc
Confidence            5678888888875555555


No 38 
>d2p13a1 d.145.1.4 (A:431-515) Uncharacterized protein NE2227 {Nitrosomonas europaea [TaxId: 915]}
Probab=23.71  E-value=44  Score=24.08  Aligned_cols=43  Identities=16%  Similarity=-0.026  Sum_probs=30.7

Q ss_pred             CCCEEEEeCCCCHHHHHHHHHHCCCcccccccccccchhhhhccCCc
Q 009304           74 EAMTITMESGVTLRQIIGESAKAGLALPYTPYWWGLTIGGLIGTGAH  120 (538)
Q Consensus        74 ~~~~vtv~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~tvGG~i~tg~h  120 (538)
                      +.++..|.+-+.+.+|.+.+   |+.+|.. .-+..||||++..-.+
T Consensus         9 ~dg~~~v~G~~~l~dl~~~l---~~~l~~e-~~~~~TlgG~i~~~lg   51 (85)
T d2p13a1           9 ADGTWLMDGWISIRKASNLL---EHDLVDE-AERYSTLGGYLLWQFG   51 (85)
T ss_dssp             TTSCEEEETTSBHHHHHHHH---TSCCCCT-TCCCCBHHHHHHHHHS
T ss_pred             CCCeEEEEecCCHHHHHHHH---CCCCCCc-cccceEHHHHHHHHhC
Confidence            34678899999999999987   4555432 1234699999976553


No 39 
>d1q7sa_ c.131.1.1 (A:) Bit1 (Cgi-147) {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.53  E-value=47  Score=25.77  Aligned_cols=39  Identities=10%  Similarity=0.148  Sum_probs=33.5

Q ss_pred             CCcCEEEeCCCHHHHHHHHHHHHHcCCceEEEeCCCCCC
Q 009304            8 CKAADVAYPTSEQEIISVVSAATIAKRKMKVATRFSHSI   46 (538)
Q Consensus         8 ~~p~~v~~P~s~~el~~~v~~a~~~~~~v~v~~ggghS~   46 (538)
                      ..+..++.-.+++++.++.+.|.++|++..++.-+||+-
T Consensus        50 g~~KIvl~v~~e~~l~~l~~~a~~~~l~~~~i~DAG~Te   88 (117)
T d1q7sa_          50 GQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQDAGRTQ   88 (117)
T ss_dssp             TCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEEECSSSS
T ss_pred             CCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCCcc
Confidence            456788899999999999999999999987776788863


No 40 
>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]}
Probab=21.32  E-value=59  Score=22.06  Aligned_cols=37  Identities=8%  Similarity=0.197  Sum_probs=27.2

Q ss_pred             CCCCCe--eEEeCCCCEEEEe---CCCCHHHHHHHHHHCCCc
Q 009304           63 KYLNKI--INIDTEAMTITME---SGVTLRQIIGESAKAGLA   99 (538)
Q Consensus        63 ~~ln~v--~~vd~~~~~vtv~---aGv~l~~L~~~l~~~Gl~   99 (538)
                      .++.+|  +.+|...++++|.   ..+...+|.+.+.+.|+.
T Consensus        23 ~~~~GV~~v~V~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~   64 (68)
T d1cpza_          23 GRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQ   64 (68)
T ss_dssp             HTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSC
T ss_pred             hcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHhhCCC
Confidence            344444  4567777887775   457899999999999974


No 41 
>d1ha9a_ g.3.2.1 (A:) Trypsin inhibitor {Spiny bitter cucumber (Momordica cochinchinensis), MCOTI-II [TaxId: 3674]}
Probab=20.25  E-value=16  Score=21.34  Aligned_cols=16  Identities=31%  Similarity=0.877  Sum_probs=12.1

Q ss_pred             ecCCCCCCCCCCCccccC
Q 009304          502 ICSQDIHCAPTKGYLCRP  519 (538)
Q Consensus       502 ~c~~~~hc~~~~~~~c~~  519 (538)
                      .|..|+.|+  .+-.|+|
T Consensus        14 kcrrdsdc~--~~cic~~   29 (34)
T d1ha9a_          14 KCRRDSDCP--GACICRG   29 (34)
T ss_dssp             BCSSGGGSC--TTCCBCT
T ss_pred             HhccccCCC--ccceecC
Confidence            588888888  5677766


Done!