Query 009307
Match_columns 538
No_of_seqs 460 out of 2761
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 23:32:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009307.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009307hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 100.0 1.2E-33 4E-38 278.9 28.7 237 255-524 14-273 (284)
2 1dqv_A Synaptotagmin III; beta 100.0 8.3E-33 2.8E-37 274.1 15.8 236 255-524 15-276 (296)
3 2dmh_A Myoferlin; beta-sandwic 99.9 8.2E-21 2.8E-25 166.2 16.7 129 257-392 4-135 (140)
4 1wfj_A Putative elicitor-respo 99.9 4E-21 1.4E-25 167.3 13.4 127 255-393 5-133 (136)
5 3b7y_A E3 ubiquitin-protein li 99.8 1.9E-20 6.6E-25 166.4 15.2 129 256-390 16-153 (153)
6 1rlw_A Phospholipase A2, CALB 99.8 2.5E-20 8.5E-25 160.0 13.3 120 259-389 2-124 (126)
7 2fk9_A Protein kinase C, ETA t 99.8 1.5E-20 5.1E-25 166.2 11.8 119 255-389 24-156 (157)
8 2ep6_A MCTP2 protein; beta san 99.8 2.7E-20 9.1E-25 161.4 13.2 126 254-390 7-132 (133)
9 3m7f_B E3 ubiquitin-protein li 99.8 1.1E-19 3.8E-24 165.4 16.0 129 257-391 5-142 (176)
10 1gmi_A Protein kinase C, epsil 99.8 3.8E-20 1.3E-24 161.1 12.3 118 258-391 4-134 (136)
11 3kwu_A MUNC13-1; calcium bindi 99.8 2E-19 6.8E-24 158.9 16.9 122 257-389 14-146 (148)
12 3pyc_A E3 ubiquitin-protein li 99.8 7.2E-19 2.5E-23 152.1 15.4 125 258-388 3-131 (132)
13 2dmh_A Myoferlin; beta-sandwic 99.8 2E-18 7E-23 150.9 16.2 120 415-538 4-134 (140)
14 2fk9_A Protein kinase C, ETA t 99.8 8.2E-19 2.8E-23 155.0 13.6 113 415-536 26-156 (157)
15 1rlw_A Phospholipase A2, CALB 99.8 2E-18 6.9E-23 148.0 14.5 116 417-538 2-126 (126)
16 2z0u_A WW domain-containing pr 99.8 2.4E-19 8E-24 159.2 8.9 111 255-365 38-154 (155)
17 2d8k_A Synaptotagmin VII; exoc 99.8 1E-18 3.5E-23 153.0 12.0 112 255-366 21-135 (141)
18 2nq3_A Itchy homolog E3 ubiqui 99.8 1.3E-18 4.5E-23 157.2 12.7 125 257-391 33-162 (173)
19 1rsy_A Synaptotagmin I; calciu 99.8 1.4E-18 4.8E-23 154.1 12.6 111 255-365 37-149 (152)
20 3f04_A Synaptotagmin-1; C2A, c 99.8 1.1E-18 3.9E-23 153.1 11.8 111 255-365 29-141 (143)
21 2b3r_A Phosphatidylinositol-4- 99.8 2.7E-18 9.3E-23 148.8 13.2 109 256-365 16-129 (134)
22 1wfj_A Putative elicitor-respo 99.8 5.8E-18 2E-22 147.2 14.4 118 415-538 7-131 (136)
23 1ugk_A Synaptotagmin IV, KIAA1 99.8 5.2E-18 1.8E-22 147.9 13.4 111 255-365 17-132 (138)
24 2chd_A Rabphilin-3A, exophilin 99.7 5.3E-18 1.8E-22 148.6 11.2 111 255-365 24-139 (142)
25 3b7y_A E3 ubiquitin-protein li 99.7 2.7E-17 9.2E-22 146.0 15.5 118 414-537 16-153 (153)
26 3nsj_A Perforin-1; pore formin 99.7 5.3E-17 1.8E-21 170.9 20.1 176 192-389 304-503 (540)
27 2bwq_A Regulating synaptic mem 99.7 7.2E-18 2.5E-22 145.1 10.9 109 255-364 13-128 (129)
28 3fbk_A RGS3, RGP3, regulator o 99.7 1.4E-17 4.7E-22 147.9 12.8 123 376-527 10-141 (153)
29 3rdl_A Protein kinase C alpha 99.7 1E-17 3.6E-22 145.7 11.9 119 378-528 3-129 (137)
30 1wfm_A Synaptotagmin XIII; C2 99.7 4.1E-17 1.4E-21 142.1 15.6 121 376-525 9-134 (138)
31 1wfm_A Synaptotagmin XIII; C2 99.7 1.3E-17 4.5E-22 145.3 12.4 109 255-366 21-132 (138)
32 2enp_A B/K protein; C2 type 1, 99.7 5.3E-18 1.8E-22 149.5 10.0 111 255-365 21-140 (147)
33 1gmi_A Protein kinase C, epsil 99.7 2.7E-17 9.1E-22 142.9 14.3 114 416-538 4-134 (136)
34 2ep6_A MCTP2 protein; beta san 99.7 1.7E-17 6E-22 143.5 13.1 115 415-537 10-132 (133)
35 3fdw_A Synaptotagmin-like prot 99.7 3.7E-18 1.3E-22 150.7 8.5 112 255-366 18-134 (148)
36 3kwu_A MUNC13-1; calcium bindi 99.7 8.7E-17 3E-21 141.8 16.9 117 415-536 14-146 (148)
37 1v27_A Regulating synaptic mem 99.7 2.1E-17 7.1E-22 144.6 12.4 122 376-527 4-137 (141)
38 1a25_A CALB, protein kinase C 99.7 9.3E-18 3.2E-22 148.3 10.3 122 376-529 16-145 (149)
39 3fdw_A Synaptotagmin-like prot 99.7 2.3E-17 7.7E-22 145.6 12.5 121 376-525 6-136 (148)
40 1a25_A CALB, protein kinase C 99.7 2.1E-17 7E-22 146.1 12.2 108 258-366 29-139 (149)
41 2dmg_A KIAA1228 protein; beta- 99.7 9.4E-18 3.2E-22 147.0 9.8 111 255-366 19-135 (142)
42 1rsy_A Synaptotagmin I; calciu 99.7 2.4E-17 8.2E-22 146.1 12.5 120 376-524 25-151 (152)
43 1rh8_A Piccolo protein; beta-s 99.7 4.5E-18 1.5E-22 149.0 7.6 107 259-365 17-137 (142)
44 3rdl_A Protein kinase C alpha 99.7 1.5E-17 5.2E-22 144.7 10.7 108 258-366 14-124 (137)
45 2d8k_A Synaptotagmin VII; exoc 99.7 4.2E-17 1.4E-21 142.6 13.5 121 376-525 9-137 (141)
46 2q3x_A Regulating synaptic mem 99.7 1.5E-17 5.1E-22 150.4 10.7 108 258-366 28-139 (171)
47 3m7f_B E3 ubiquitin-protein li 99.7 7.7E-17 2.6E-21 146.5 14.9 118 415-538 5-142 (176)
48 1v27_A Regulating synaptic mem 99.7 1.6E-17 5.6E-22 145.2 9.9 111 255-366 16-133 (141)
49 2bwq_A Regulating synaptic mem 99.7 4.7E-17 1.6E-21 140.0 12.6 115 378-522 3-129 (129)
50 3fbk_A RGS3, RGP3, regulator o 99.7 4.5E-17 1.5E-21 144.5 12.2 110 255-366 22-137 (153)
51 3f04_A Synaptotagmin-1; C2A, c 99.7 6.5E-17 2.2E-21 141.8 13.1 119 376-523 17-142 (143)
52 2enp_A B/K protein; C2 type 1, 99.7 4.1E-17 1.4E-21 143.8 11.2 121 375-524 8-142 (147)
53 2b3r_A Phosphatidylinositol-4- 99.7 1.5E-16 5.2E-21 137.7 13.7 106 417-526 19-133 (134)
54 1tjx_A Similar to synaptotagmi 99.7 9.3E-17 3.2E-21 143.5 12.7 98 255-352 20-121 (159)
55 2cjt_A UNC-13 homolog A, MUNC1 99.7 1.5E-16 5.2E-21 136.9 13.3 88 258-355 3-91 (131)
56 2z0u_A WW domain-containing pr 99.7 3.9E-17 1.3E-21 144.8 9.6 118 376-522 26-154 (155)
57 1rh8_A Piccolo protein; beta-s 99.7 2.7E-17 9.1E-22 144.1 8.4 119 376-525 3-140 (142)
58 3n5a_A Synaptotagmin-7; calciu 99.7 7.7E-17 2.6E-21 140.3 10.6 99 255-353 11-113 (138)
59 2cm5_A Rabphilin-3A; protein t 99.7 2E-16 7E-21 142.3 13.4 99 255-353 32-134 (166)
60 3pyc_A E3 ubiquitin-protein li 99.7 5.5E-16 1.9E-20 133.8 15.0 114 416-536 3-132 (132)
61 1w15_A Synaptotagmin IV; metal 99.7 9.4E-17 3.2E-21 142.5 9.9 97 255-351 25-125 (153)
62 2dmg_A KIAA1228 protein; beta- 99.7 9.4E-17 3.2E-21 140.6 9.5 121 375-525 6-137 (142)
63 2cm5_A Rabphilin-3A; protein t 99.7 1.1E-16 3.6E-21 144.2 9.6 106 376-510 20-134 (166)
64 1tjx_A Similar to synaptotagmi 99.7 4.9E-16 1.7E-20 138.7 13.7 121 376-525 8-149 (159)
65 2r83_A Synaptotagmin-1; C2A-C2 99.7 9E-16 3.1E-20 150.7 16.8 132 377-537 3-147 (284)
66 1w15_A Synaptotagmin IV; metal 99.7 1.6E-16 5.4E-21 141.0 10.2 118 376-524 13-139 (153)
67 2chd_A Rabphilin-3A, exophilin 99.7 3.1E-16 1.1E-20 137.2 11.6 119 376-523 12-140 (142)
68 1ugk_A Synaptotagmin IV, KIAA1 99.7 1.1E-15 3.8E-20 133.0 14.8 120 376-524 5-134 (138)
69 3l9b_A Otoferlin; C2-domain, b 99.7 4.2E-16 1.4E-20 131.9 11.1 119 259-391 20-141 (144)
70 2q3x_A Regulating synaptic mem 99.7 5E-16 1.7E-20 140.4 12.5 116 376-524 15-140 (171)
71 2nq3_A Itchy homolog E3 ubiqui 99.7 8.7E-16 3E-20 138.7 13.3 115 416-537 34-161 (173)
72 3n5a_A Synaptotagmin-7; calciu 99.6 1E-15 3.5E-20 133.2 12.6 115 379-524 2-125 (138)
73 3jzy_A Intersectin 2; C2 domai 99.6 5.7E-16 1.9E-20 165.0 11.8 120 257-389 384-507 (510)
74 2cjs_A UNC-13 homolog A, MUNC1 99.6 3.5E-15 1.2E-19 133.6 13.2 89 257-355 11-100 (167)
75 3l9b_A Otoferlin; C2-domain, b 99.6 1.2E-14 4.2E-19 123.0 14.1 117 416-538 19-141 (144)
76 1dqv_A Synaptotagmin III; beta 99.6 7.4E-15 2.5E-19 145.0 14.0 133 376-537 3-149 (296)
77 1cjy_A CPLA2, protein (cytosol 99.6 4.1E-15 1.4E-19 161.2 9.9 108 257-365 15-125 (749)
78 3jzy_A Intersectin 2; C2 domai 99.5 5.1E-14 1.7E-18 149.9 15.3 117 415-536 384-507 (510)
79 2cjt_A UNC-13 homolog A, MUNC1 99.5 9.5E-14 3.3E-18 119.3 14.0 89 416-513 3-92 (131)
80 1djx_A PLC-D1, phosphoinositid 99.5 1.1E-13 3.6E-18 149.1 15.2 123 258-389 495-623 (624)
81 2cjs_A UNC-13 homolog A, MUNC1 99.5 2E-13 6.8E-18 122.2 12.5 88 417-513 13-101 (167)
82 3nsj_A Perforin-1; pore formin 99.5 7.7E-13 2.7E-17 139.3 15.9 109 416-535 392-502 (540)
83 3bxj_A RAS GTPase-activating p 99.4 2.5E-14 8.4E-19 150.2 0.5 127 258-392 9-159 (483)
84 1cjy_A CPLA2, protein (cytosol 99.3 4.6E-12 1.6E-16 137.5 12.3 108 416-531 16-132 (749)
85 1djx_A PLC-D1, phosphoinositid 99.3 1.4E-11 4.7E-16 132.7 15.1 114 415-536 494-623 (624)
86 3bxj_A RAS GTPase-activating p 99.3 2.2E-13 7.5E-18 143.0 -0.1 117 416-537 9-157 (483)
87 3pfq_A PKC-B, PKC-beta, protei 99.2 9.8E-12 3.3E-16 136.4 9.4 108 258-366 170-280 (674)
88 3pfq_A PKC-B, PKC-beta, protei 99.2 1.4E-10 4.7E-15 127.3 13.1 104 417-525 171-282 (674)
89 3ohm_B 1-phosphatidylinositol- 99.1 1.6E-10 5.5E-15 127.4 13.1 118 259-392 724-847 (885)
90 2zkm_X 1-phosphatidylinositol- 99.1 2.4E-10 8.2E-15 126.0 13.0 115 258-389 676-798 (799)
91 3qr0_A Phospholipase C-beta (P 99.1 3.3E-10 1.1E-14 124.3 13.8 118 259-392 649-773 (816)
92 1yrk_A NPKC-delta, protein kin 99.0 4.9E-09 1.7E-13 86.0 12.0 114 258-389 4-124 (126)
93 3qr0_A Phospholipase C-beta (P 98.9 7.4E-09 2.5E-13 113.6 14.7 108 416-536 648-770 (816)
94 2enj_A NPKC-theta, protein kin 98.9 7.4E-09 2.5E-13 86.0 11.0 114 258-389 8-129 (138)
95 2zkm_X 1-phosphatidylinositol- 98.9 7.6E-09 2.6E-13 114.1 14.3 108 416-536 676-798 (799)
96 3ohm_B 1-phosphatidylinositol- 98.9 8.2E-09 2.8E-13 113.9 13.7 107 417-536 724-844 (885)
97 1yrk_A NPKC-delta, protein kin 98.9 8.5E-08 2.9E-12 78.7 15.6 108 416-536 4-124 (126)
98 2enj_A NPKC-theta, protein kin 98.8 7.2E-08 2.5E-12 80.1 13.4 108 416-536 8-129 (138)
99 3l4c_A Dedicator of cytokinesi 92.2 2 6.9E-05 38.9 12.4 57 295-351 77-139 (220)
100 2yrb_A Protein fantom; beta sa 91.3 1.5 5E-05 37.5 9.9 128 256-391 14-151 (156)
101 2yrb_A Protein fantom; beta sa 90.7 2.8 9.5E-05 35.8 11.1 115 416-537 16-150 (156)
102 3hhm_A Phosphatidylinositol-4, 90.0 3.1 0.00011 46.9 13.7 93 259-353 354-456 (1091)
103 2wxf_A Phosphatidylinositol-4, 88.5 2.1 7E-05 47.8 10.9 93 258-353 215-325 (940)
104 2wxf_A Phosphatidylinositol-4, 85.7 2.8 9.4E-05 46.8 9.9 94 417-510 216-325 (940)
105 1e7u_A Phosphatidylinositol 3- 84.2 5.7 0.00019 44.4 11.6 94 260-354 218-332 (961)
106 2y3a_A Phosphatidylinositol-4, 74.6 4.2 0.00014 46.0 6.6 74 258-334 351-430 (1092)
107 3hhm_A Phosphatidylinositol-4, 73.6 9 0.00031 43.2 8.9 93 417-510 354-456 (1091)
108 1e7u_A Phosphatidylinositol 3- 73.2 13 0.00043 41.6 10.0 94 417-510 217-331 (961)
109 2y3a_A Phosphatidylinositol-4, 70.7 4.5 0.00016 45.7 5.7 94 417-510 352-471 (1092)
110 3l4c_A Dedicator of cytokinesi 63.4 28 0.00094 31.4 8.3 62 447-508 77-139 (220)
111 1ewf_A BPI, bactericidal/perme 35.4 3.5E+02 0.012 26.9 13.6 20 164-183 103-122 (456)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=100.00 E-value=1.2e-33 Score=278.89 Aligned_cols=237 Identities=26% Similarity=0.428 Sum_probs=197.5
Q ss_pred CCCCeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCccCCeeeeeecCCCCCCeEecEEEEEeeCC--CCCEEEEEEEe
Q 009307 255 YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRDP--ESQAVELAVYD 332 (538)
Q Consensus 255 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~w~e~f~f~v~~~--~~~~L~i~v~d 332 (538)
+....|.|.|+|++|++|+.+|..|.+||||++++++.....++|+++++++||.|||+|.|.+... ....|.|+|||
T Consensus 14 y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d 93 (284)
T 2r83_A 14 YDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYD 93 (284)
T ss_dssp EETTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEE
T ss_pred EECCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEE
Confidence 4456799999999999999999889999999999986544567999999999999999999998643 35799999999
Q ss_pred ccCCCCCcccEEEEEeCccCCCCCCeEEEEecccccccCCCCCCccccEEEEEEEEEeccCCCCCCccccccccccCCCC
Q 009307 333 WEQVGKHDKMGMNVVPLKELTPEEPSVKTLDLLKNMDLNDGQNEKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPEN 412 (538)
Q Consensus 333 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~ 412 (538)
++.+++|++||++.++|.++..+.....|++|..... ......|+|.+++.|.|
T Consensus 94 ~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~----~~~~~~G~i~l~l~~~p---------------------- 147 (284)
T 2r83_A 94 FDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEK----EEQEKLGDICFSLRYVP---------------------- 147 (284)
T ss_dssp CCSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSS----CCCCCCCEEEEEEEEET----------------------
T ss_pred CCCCCCCceeEEEEEcchhcccCCcceeEEEeecccc----ccccccccEEEEEEecC----------------------
Confidence 9999999999999999999998877888888754211 12346799999999985
Q ss_pred CCCCceEEEEEEEeeecCCCC---CCCCcEEEEEEC--C---eEEEeeeecCCCCCcccceEEEEecCCCC-CCeEEEEE
Q 009307 413 TPAGGGLLVVIVHEAQDVEGK---HHTNPYARILFR--G---EERKTKHVKKNRDPRWEEEFQFMLEEPPT-NDRLHVEV 483 (538)
Q Consensus 413 ~~~~~g~L~v~v~~a~~L~~~---~~~dpyv~v~~~--~---~~~kT~v~~~t~nP~w~e~f~f~v~~~~~-~~~l~v~V 483 (538)
..+.|.|.|++|++|+.. +.+||||++++. + ..++|++++++.||+|||.|.|.+..... ...|.|+|
T Consensus 148 ---~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V 224 (284)
T 2r83_A 148 ---TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTV 224 (284)
T ss_dssp ---TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEE
T ss_pred ---cCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEE
Confidence 367899999999999863 578999999984 2 34699999999999999999999875422 23799999
Q ss_pred EEcccCccCCCCCceeEEEEEechhh----------cc--cceeceEEEeCCC
Q 009307 484 CSVSSRIGLLHPKETLGYIDINLSDV----------VS--NKRINEKYHLIDS 524 (538)
Q Consensus 484 ~d~~~~~g~~~~d~~lG~~~i~l~~l----------~~--~~~~~~~~~L~~~ 524 (538)
||++. ++++++||++.++++.+ +. +....+||+|...
T Consensus 225 ~d~d~----~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 225 LDYDK----IGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 273 (284)
T ss_dssp EECCS----SSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBCH
T ss_pred EeCCC----CCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCCc
Confidence 99986 67899999999999763 22 2456789999764
No 2
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=100.00 E-value=8.3e-33 Score=274.13 Aligned_cols=236 Identities=27% Similarity=0.446 Sum_probs=189.1
Q ss_pred CCCCeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCccCCeeeeeecCCCCCCeEecEEEEEeeCC--CCCEEEEEEEe
Q 009307 255 YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRDP--ESQAVELAVYD 332 (538)
Q Consensus 255 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~w~e~f~f~v~~~--~~~~L~i~v~d 332 (538)
+....+.|.|+|++|++|+.+|..|.+||||++++.+.....++|+++++++||+|||+|.|.+... ....|.|+|||
T Consensus 15 y~~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d 94 (296)
T 1dqv_A 15 YLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYD 94 (296)
T ss_dssp CCSSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEE
Confidence 4557899999999999999999899999999999964433457999999999999999999998643 24689999999
Q ss_pred ccCCCCCcccEEEEEe-CccCCC-CCCeEEEEecccccccCCCCCCccccEEEEEEEEEeccCCCCCCccccccccccCC
Q 009307 333 WEQVGKHDKMGMNVVP-LKELTP-EEPSVKTLDLLKNMDLNDGQNEKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAP 410 (538)
Q Consensus 333 ~~~~~~d~~lG~~~i~-l~~l~~-~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~ 410 (538)
+|.+++|++||++.++ +.++.. ......|+++.... ......|+|.+++.|.|
T Consensus 95 ~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~-----~~~~~~G~i~vsl~y~~-------------------- 149 (296)
T 1dqv_A 95 FDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGG-----SEKADLGELNFSLCYLP-------------------- 149 (296)
T ss_dssp CCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCS-----SCCSCCCEEEEEEEEET--------------------
T ss_pred cCCCCCCceEEEEEeccccccccCCccceeeecccccc-----ccccccceEEEEEEecc--------------------
Confidence 9999999999999996 444443 22334566653211 12456799999999975
Q ss_pred CCCCCCceEEEEEEEeeecCCCC---CCCCcEEEEEEC--C---eEEEeeeecCCCCCcccceEEEEecCCCC-CCeEEE
Q 009307 411 ENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILFR--G---EERKTKHVKKNRDPRWEEEFQFMLEEPPT-NDRLHV 481 (538)
Q Consensus 411 ~~~~~~~g~L~v~v~~a~~L~~~---~~~dpyv~v~~~--~---~~~kT~v~~~t~nP~w~e~f~f~v~~~~~-~~~l~v 481 (538)
..|.|.|+|++|++|+.. +.+||||++++. + .+++|++++++.||+|||.|.|.+..... ...|.|
T Consensus 150 -----~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i 224 (296)
T 1dqv_A 150 -----TAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSI 224 (296)
T ss_dssp -----TTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCC
T ss_pred -----ccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEE
Confidence 368999999999999764 568999999996 3 45799999999999999999999875422 237999
Q ss_pred EEEEcccCccCCCCCceeEEEEEechhhcc-------------cceeceEEEeCCC
Q 009307 482 EVCSVSSRIGLLHPKETLGYIDINLSDVVS-------------NKRINEKYHLIDS 524 (538)
Q Consensus 482 ~V~d~~~~~g~~~~d~~lG~~~i~l~~l~~-------------~~~~~~~~~L~~~ 524 (538)
+|||++. ++++++||++.++++++.. +....+|+.|...
T Consensus 225 ~V~d~d~----~~~~~~iG~~~i~l~~~~~~~~~~W~~~~~~~~~~~~~w~~L~~~ 276 (296)
T 1dqv_A 225 AVVDYDC----IGHNEVIGVCRVGPEAADPHGREHWAEMLANPRKPVEHWHQLVEE 276 (296)
T ss_dssp EEEECCS----SSCCEEEEECCCSSCTTCHHHHHHHHTSSSSSSSCSCSCCCCBBC
T ss_pred EEEeCCC----CCCCceEEEEEECCccCCchhHHHHHHHHhCCCCceeEeeeccCc
Confidence 9999986 6789999999999987643 2355678887654
No 3
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.86 E-value=8.2e-21 Score=166.18 Aligned_cols=129 Identities=29% Similarity=0.482 Sum_probs=109.8
Q ss_pred CCeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCccCCeeeeeecCCCCCCeEecEEEEEeeCC---CCCEEEEEEEec
Q 009307 257 RPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRDP---ESQAVELAVYDW 333 (538)
Q Consensus 257 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~w~e~f~f~v~~~---~~~~L~i~v~d~ 333 (538)
...|.|.|+|++|++|+..+. |.+||||+++++++. ++|++++++.||+|||+|.|.+... ....|.|+|||+
T Consensus 4 ~~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~~---~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~ 79 (140)
T 2dmh_A 4 GSSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKDEK---KKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDF 79 (140)
T ss_dssp CBCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSSCE---EECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEET
T ss_pred CCCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCEe---EEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEEC
Confidence 457999999999999999998 999999999999754 6999999999999999999999754 368999999999
Q ss_pred cCCCCCcccEEEEEeCccCCCCCCeEEEEecccccccCCCCCCccccEEEEEEEEEecc
Q 009307 334 EQVGKHDKMGMNVVPLKELTPEEPSVKTLDLLKNMDLNDGQNEKSRGQLVVEFIYKPFK 392 (538)
Q Consensus 334 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~~~p~~ 392 (538)
+..++|++||++.+++.++..+.....|+.+...... .+....|+|+++++|.|..
T Consensus 80 d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~---~~~~~~G~l~l~~~~~p~~ 135 (140)
T 2dmh_A 80 ETIGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNE---KGQDTGATIDLVIGYDPPS 135 (140)
T ss_dssp TCSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECT---TCCEEEEEEEEEEEECCCB
T ss_pred CCCCCCceEEEEEEEHHHhccCCCceeEEeeeeccCC---CCCCCCCEEEEEEEEECCC
Confidence 9999999999999999999888777778773322221 1245679999999999853
No 4
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.85 E-value=4e-21 Score=167.28 Aligned_cols=127 Identities=28% Similarity=0.512 Sum_probs=110.4
Q ss_pred CCCCeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCccCCeeeeeecC-CCCCCeEecEEEEEeeCCCCCEEEEEEEec
Q 009307 255 YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLPSKKTTVKH-KNLNPEWNEEYNFTVRDPESQAVELAVYDW 333 (538)
Q Consensus 255 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~T~v~~-~t~nP~w~e~f~f~v~~~~~~~L~i~v~d~ 333 (538)
...+.|.|+|+|++|++|+..+..|.+||||+++++++. .+|++++ ++.||.|||+|.|.+.+ ....|.|+|||+
T Consensus 5 ~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~---~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~V~d~ 80 (136)
T 1wfj_A 5 SSGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQD---QKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAKIFDK 80 (136)
T ss_dssp CCCCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCE---EECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEEECCS
T ss_pred CCCCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCcc---ceeEeccCCCCCCccCcEEEEEECC-CCCEEEEEEEEC
Confidence 456899999999999999999988999999999998764 5899998 89999999999999987 478999999999
Q ss_pred cCCCCCcccEEEEEeCccCC-CCCCeEEEEecccccccCCCCCCccccEEEEEEEEEeccC
Q 009307 334 EQVGKHDKMGMNVVPLKELT-PEEPSVKTLDLLKNMDLNDGQNEKSRGQLVVEFIYKPFKE 393 (538)
Q Consensus 334 ~~~~~d~~lG~~~i~l~~l~-~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~~~p~~~ 393 (538)
+.+++|++||++.+++.++. .+.....|+++.+ +.+..|+|+++++|.|...
T Consensus 81 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~--------~~~~~G~i~l~l~~~p~~~ 133 (136)
T 1wfj_A 81 DVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVVK--------DEEYKGEIWVALSFKPSGP 133 (136)
T ss_dssp SSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEEE--------TTEEEEEEEEEEEEEECCS
T ss_pred CCCCCCceEEEEEEEHHHhccCCCCCcEEEEeec--------CCccCEEEEEEEEEEeCCC
Confidence 99999999999999999994 4444566777751 3578999999999999643
No 5
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.84 E-value=1.9e-20 Score=166.41 Aligned_cols=129 Identities=34% Similarity=0.582 Sum_probs=102.5
Q ss_pred CCCeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCcc---CCeeeeeecCCCCCCeEecEEEEEeeCCCCCEEEEEEEe
Q 009307 256 RRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDK---LPSKKTTVKHKNLNPEWNEEYNFTVRDPESQAVELAVYD 332 (538)
Q Consensus 256 ~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~---~~~~~T~v~~~t~nP~w~e~f~f~v~~~~~~~L~i~v~d 332 (538)
....|.|+|+|++|++|+.+|..|.+||||++++.+.. ...++|++++++.||+|||+|.|.+... ...|.|+|||
T Consensus 16 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~l~~~V~d 94 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ-QHRLLFEVFD 94 (153)
T ss_dssp CTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTT-TCEEEEEEEE
T ss_pred CCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCC-CCEEEEEEEE
Confidence 45789999999999999999988999999999998532 2357999999999999999999999764 6799999999
Q ss_pred ccCCCCCcccEEEEEeCccCCCCCCe------EEEEecccccccCCCCCCccccEEEEEEEEEe
Q 009307 333 WEQVGKHDKMGMNVVPLKELTPEEPS------VKTLDLLKNMDLNDGQNEKSRGQLVVEFIYKP 390 (538)
Q Consensus 333 ~~~~~~d~~lG~~~i~l~~l~~~~~~------~~~~~l~~~~~~~~~~~~~~~G~l~l~l~~~p 390 (538)
++..++|++||++.+++.++..+... ..|+.|.... ......|+|+++++|.|
T Consensus 95 ~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~-----~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 95 ENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRS-----HKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp CCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSS-----TTCCCCSEEEEEEEECC
T ss_pred CCCCcCCCeeEEEEEEHHHcccCCCccccccccccccccccc-----CCCCcceEEEEEEEEeC
Confidence 99999999999999999999876543 4677764321 12467899999999986
No 6
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.83 E-value=2.5e-20 Score=159.97 Aligned_cols=120 Identities=22% Similarity=0.364 Sum_probs=102.5
Q ss_pred eeEEEEEEEeecCCccC---CCCCCCCcEEEEEEcCccCCeeeeeecCCCCCCeEecEEEEEeeCCCCCEEEEEEEeccC
Q 009307 259 VGILHVKVVKAMNLKKK---DLLGASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRDPESQAVELAVYDWEQ 335 (538)
Q Consensus 259 ~g~L~V~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~w~e~f~f~v~~~~~~~L~i~v~d~~~ 335 (538)
.|.|.|+|++|++|+.+ +..|.+||||++++++.....++|++++++.||+|||+|.|.+.......|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 58999999999999984 566899999999998754455799999999999999999999976667899999999998
Q ss_pred CCCCcccEEEEEeCccCCCCCCeEEEEecccccccCCCCCCccccEEEEEEEEE
Q 009307 336 VGKHDKMGMNVVPLKELTPEEPSVKTLDLLKNMDLNDGQNEKSRGQLVVEFIYK 389 (538)
Q Consensus 336 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~~~ 389 (538)
. +|++||++.++|.++..+.....|++|. ....|+|++++...
T Consensus 82 ~-~~~~iG~~~i~l~~l~~~~~~~~~~~L~----------~~~~g~i~~~le~~ 124 (126)
T 1rlw_A 82 V-MDETLGTATFTVSSMKVGEKKEVPFIFN----------QVTEMVLEMSLEVA 124 (126)
T ss_dssp S-CCEEEEEEEEEGGGSCTTCEEEEEEEET----------TTEEEEEEEEEECC
T ss_pred C-CCceeEEEEEEHHHccCCCcEEEEEEcC----------CCceEEEEEEEEeC
Confidence 7 4899999999999999888888898873 24567777776543
No 7
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.83 E-value=1.5e-20 Score=166.18 Aligned_cols=119 Identities=24% Similarity=0.348 Sum_probs=102.3
Q ss_pred CCCCeeEEEEEEEeecCCccCCC----------CCCCCcEEEEEEcCccCCeeeeeecCCCCCCeEecEEEEEeeCCCCC
Q 009307 255 YRRPVGILHVKVVKAMNLKKKDL----------LGASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRDPESQ 324 (538)
Q Consensus 255 ~~~~~g~L~V~v~~a~~L~~~d~----------~g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~w~e~f~f~v~~~~~~ 324 (538)
.....|.|+|+|++|++|+.+|. .|.+||||++++++++ ..+|+++++|+||+|||+|.|.+.+ .+
T Consensus 24 ~~~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~--~~kT~v~~ktlnP~WNE~F~f~v~~--~~ 99 (157)
T 2fk9_A 24 TMKFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVR--VGQTSTKQKTNKPTYNEEFCANVTD--GG 99 (157)
T ss_dssp CCCEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEE--EEECCCCSSCSSCEEEEEEEEEEEE--EC
T ss_pred hccCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEe--eEEeeecCCCCCCccCcEEEEEcCC--CC
Confidence 44578999999999999998873 2679999999998754 3589999999999999999999975 46
Q ss_pred EEEEEEEeccCCCCCcccEEEEEeCccCCCC----CCeEEEEecccccccCCCCCCccccEEEEEEEEE
Q 009307 325 AVELAVYDWEQVGKHDKMGMNVVPLKELTPE----EPSVKTLDLLKNMDLNDGQNEKSRGQLVVEFIYK 389 (538)
Q Consensus 325 ~L~i~v~d~~~~~~d~~lG~~~i~l~~l~~~----~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~~~ 389 (538)
.|.|+|||+|.+++|++||++.++++++..+ ...+.|++|. ..|+|+++++|.
T Consensus 100 ~L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~------------~~G~i~l~l~~~ 156 (157)
T 2fk9_A 100 HLELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLE------------PEGKVFVVITLT 156 (157)
T ss_dssp EEEEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECB------------SSCEEEEEEEEC
T ss_pred EEEEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECC------------CCcEEEEEEEEE
Confidence 8999999999999999999999999998854 5567888872 279999999874
No 8
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.83 E-value=2.7e-20 Score=161.38 Aligned_cols=126 Identities=31% Similarity=0.501 Sum_probs=107.7
Q ss_pred cCCCCeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCccCCeeeeeecCCCCCCeEecEEEEEeeCCCCCEEEEEEEec
Q 009307 254 AYRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRDPESQAVELAVYDW 333 (538)
Q Consensus 254 ~~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~w~e~f~f~v~~~~~~~L~i~v~d~ 333 (538)
.+..+.|.|.|+|++|++|+.+|..|.+||||+++++++. .+|++++++.||.|||+|.|.+.+. ...|.|+|||+
T Consensus 7 ~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~---~kT~~~~~t~nP~wne~f~f~~~~~-~~~l~i~V~d~ 82 (133)
T 2ep6_A 7 GDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDR---LQTHTVYKNLNPEWNKVFTFPIKDI-HDVLEVTVFDE 82 (133)
T ss_dssp CSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEE---EECCCCSSCSSCCCCEEEEEEESCT-TCEEEEEEEEE
T ss_pred cccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEE---EEeeeecCCCCCccccEEEEEecCC-CCEEEEEEEEC
Confidence 4556889999999999999999988999999999998764 5999999999999999999999865 57899999999
Q ss_pred cCCCCCcccEEEEEeCccCCCCCCeEEEEecccccccCCCCCCccccEEEEEEEEEe
Q 009307 334 EQVGKHDKMGMNVVPLKELTPEEPSVKTLDLLKNMDLNDGQNEKSRGQLVVEFIYKP 390 (538)
Q Consensus 334 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~~~p 390 (538)
+..++|++||++.+++.++..+.. .|++|.... ......|+|+++++|..
T Consensus 83 d~~~~~~~lG~~~i~l~~l~~~~~--~w~~L~~~~-----~~~~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 83 DGDKPPDFLGKVAIPLLSIRDGQP--NCYVLKNKD-----LEQAFKGVIYLEMDLIY 132 (133)
T ss_dssp ETTEEEEECCBCEEEGGGCCSSCC--EECCCBCSC-----TTSCCSSEEEEEEEEEE
T ss_pred CCCCCCCeeEEEEEEHHHccCCCc--eEEEeecCC-----CCCccceEEEEEEEEEe
Confidence 999899999999999999977543 566664321 12467899999999863
No 9
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.82 E-value=1.1e-19 Score=165.43 Aligned_cols=129 Identities=33% Similarity=0.547 Sum_probs=100.3
Q ss_pred CCeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCccC---CeeeeeecCCCCCCeEecEEEEEeeCCCCCEEEEEEEec
Q 009307 257 RPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKL---PSKKTTVKHKNLNPEWNEEYNFTVRDPESQAVELAVYDW 333 (538)
Q Consensus 257 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~---~~~~T~v~~~t~nP~w~e~f~f~v~~~~~~~L~i~v~d~ 333 (538)
...|.|+|+|++|++|+.++..|.+||||++++.+... ..++|+++++++||.|||+|.|.+... ...|.|+|||+
T Consensus 5 ~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~-~~~L~~~V~d~ 83 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQ-RHRILFEVFDE 83 (176)
T ss_dssp TTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTT-TCEEEEEEEEC
T ss_pred CCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCC-CCEEEEEEEEC
Confidence 46899999999999999999889999999999986332 356999999999999999999999754 57999999999
Q ss_pred cCCCCCcccEEEEEeCccCCCCCCe-E-----EEEecccccccCCCCCCccccEEEEEEEEEec
Q 009307 334 EQVGKHDKMGMNVVPLKELTPEEPS-V-----KTLDLLKNMDLNDGQNEKSRGQLVVEFIYKPF 391 (538)
Q Consensus 334 ~~~~~d~~lG~~~i~l~~l~~~~~~-~-----~~~~l~~~~~~~~~~~~~~~G~l~l~l~~~p~ 391 (538)
+.+++|++||++.++|.++..+... + .|+.|.... ...+..|+|++++.|.|.
T Consensus 84 d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~-----~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 84 NRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRS-----HKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp C----CEEEEEEEEESCSCCBC------CCCCEEEECBCSS-----TTCCCCSEEEEEEEECC-
T ss_pred CCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccC-----CCCccCEEEEEEEEEEeC
Confidence 9999999999999999999876443 1 577764321 124578999999999997
No 10
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.82 E-value=3.8e-20 Score=161.06 Aligned_cols=118 Identities=25% Similarity=0.403 Sum_probs=101.1
Q ss_pred CeeEEEEEEEeecCCccCCCCCC-----------CCcEEEEEEcCccCCeeeeeecCCCCCCeEecEEEEEeeCCCCCEE
Q 009307 258 PVGILHVKVVKAMNLKKKDLLGA-----------SDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRDPESQAV 326 (538)
Q Consensus 258 ~~g~L~V~v~~a~~L~~~d~~g~-----------~dpyv~v~~~~~~~~~~~T~v~~~t~nP~w~e~f~f~v~~~~~~~L 326 (538)
..|.|+|+|++|++|+.+|..++ +||||++++++.. ..+|+++.+|+||+|||+|.|.+.+. +.|
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~--~~~T~~~~~t~nP~WnE~f~f~v~~~--~~L 79 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSR--IGQTATKQKTNSPAWHDEFVTDVCNG--RKI 79 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEE--EEECCCCSSCSSCEEEEEEEEEEEEE--CEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeE--eeeeeEECCCcCCccCCEEEEEecCC--CEE
Confidence 46999999999999998875544 9999999997654 35899999999999999999999765 799
Q ss_pred EEEEEeccCCCCCcccEEEEEeCccCCCCCC--eEEEEecccccccCCCCCCccccEEEEEEEEEec
Q 009307 327 ELAVYDWEQVGKHDKMGMNVVPLKELTPEEP--SVKTLDLLKNMDLNDGQNEKSRGQLVVEFIYKPF 391 (538)
Q Consensus 327 ~i~v~d~~~~~~d~~lG~~~i~l~~l~~~~~--~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~~~p~ 391 (538)
.|+|||+|..++|++||++.+++.++..+.. ...|+++ ...|+|+++++|.+.
T Consensus 80 ~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L------------~~~G~i~l~l~~~~~ 134 (136)
T 1gmi_A 80 ELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDL------------EPEGKVYVIIDLSGS 134 (136)
T ss_dssp EEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEEC------------BSSCEEEEEEEEEEE
T ss_pred EEEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEc------------CCCeEEEEEEEEEec
Confidence 9999999999999999999999999987542 3677765 237999999999863
No 11
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.82 E-value=2e-19 Score=158.93 Aligned_cols=122 Identities=25% Similarity=0.431 Sum_probs=103.6
Q ss_pred CCeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCccCCeeeeeecCCCCCCeEecEEEEEeeCCCCCEEEEEEEeccCC
Q 009307 257 RPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRDPESQAVELAVYDWEQV 336 (538)
Q Consensus 257 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~w~e~f~f~v~~~~~~~L~i~v~d~~~~ 336 (538)
...|.|+|+|++|++|+.+|..|.+||||+++++++. ++|+++++++||.|||+|.|.+..+ .+.|.++|||++..
T Consensus 14 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~---~kT~~~~~t~nP~Wne~f~f~v~~~-~~~l~~~v~d~d~~ 89 (148)
T 3kwu_A 14 KWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTK---KRTKTIYGNLNPVWEENFHFECHNS-SDRIKVRVLDEDDD 89 (148)
T ss_dssp -CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEE---EECCCCCSCSSCEEEEEEEEEECST-TCEEEEEEEECCCS
T ss_pred ccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEE---EECCccCCCCCCCcccEEEEEecCC-CCEEEEEEEECCCC
Confidence 3579999999999999999989999999999997644 5999999999999999999999776 57999999999985
Q ss_pred -----------CCCcccEEEEEeCccCCCCCCeEEEEecccccccCCCCCCccccEEEEEEEEE
Q 009307 337 -----------GKHDKMGMNVVPLKELTPEEPSVKTLDLLKNMDLNDGQNEKSRGQLVVEFIYK 389 (538)
Q Consensus 337 -----------~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~~~ 389 (538)
++|++||++.+++.++. .....|++|.... ......|+|+++++|.
T Consensus 90 ~~~~~~~~~~~~~~~~lG~~~i~l~~l~--~~~~~w~~L~~~~-----~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 90 IKSRVKQRFKRESDDFLGQTIIEVRTLS--GEMDVWYNLDKRT-----DKSAVSGAIRLHISVE 146 (148)
T ss_dssp HHHHHHTTTSSCSSEEEEEEEEEGGGCC--SEEEEEEECBCSS-----TTCCCCCEEEEEEEEE
T ss_pred ccccccccccCCCCccEEEEEEEHHHCc--CCCCEEEEcccCC-----CCCCCceEEEEEEEEE
Confidence 78999999999999994 3456777774321 1245789999999985
No 12
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.80 E-value=7.2e-19 Score=152.09 Aligned_cols=125 Identities=23% Similarity=0.441 Sum_probs=100.6
Q ss_pred CeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCccCCeeeeeecCCCCCCeEecEEEEEeeCCCCCEEEEEEEeccCCC
Q 009307 258 PVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRDPESQAVELAVYDWEQVG 337 (538)
Q Consensus 258 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~w~e~f~f~v~~~~~~~L~i~v~d~~~~~ 337 (538)
....|+|+|++|++|+.+|..|.+||||++++++.. ..++|+++++++||+|||+|.|.+... +.|.|+|||++..+
T Consensus 3 ~~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~-~~~kT~v~~~t~nP~wne~f~f~v~~~--~~l~~~v~d~d~~~ 79 (132)
T 3pyc_A 3 EFIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSG-QCHSTDTVKNTLDPKWNQHYDLYVGKT--DSITISVWNHKKIH 79 (132)
T ss_dssp SEEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTC-CEEECCCCSSCSSCEEEEEEEEEEETT--CCEEEEEEEGGGTT
T ss_pred CeEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCC-ceEECCccCCCCCCCccCEEEEEeCCC--CEEEEEEEECCCCC
Confidence 457899999999999999999999999999997643 457999999999999999999999765 35999999999887
Q ss_pred C---CcccEEEEEeCccCC-CCCCeEEEEecccccccCCCCCCccccEEEEEEEE
Q 009307 338 K---HDKMGMNVVPLKELT-PEEPSVKTLDLLKNMDLNDGQNEKSRGQLVVEFIY 388 (538)
Q Consensus 338 ~---d~~lG~~~i~l~~l~-~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~~ 388 (538)
+ |++||++.+++.++. .......+++|... .+. ......|+|++++++
T Consensus 80 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~-~~~--~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 80 KKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKL-NPS--DTDAVRGQIVVSLQT 131 (132)
T ss_dssp SSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCS-STT--CCCCCCSEEEEEEEE
T ss_pred CCCCCCceEEEEEeHHHhhcccccCcEEEeeeec-CCC--CCCceeEEEEEEEEc
Confidence 6 899999999999883 22333456666432 111 124578999999875
No 13
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=2e-18 Score=150.85 Aligned_cols=120 Identities=23% Similarity=0.485 Sum_probs=104.5
Q ss_pred CCceEEEEEEEeeecCCCC--CCCCcEEEEEECCeEEEeeeecCCCCCcccceEEEEecCCC--CCCeEEEEEEEcccCc
Q 009307 415 AGGGLLVVIVHEAQDVEGK--HHTNPYARILFRGEERKTKHVKKNRDPRWEEEFQFMLEEPP--TNDRLHVEVCSVSSRI 490 (538)
Q Consensus 415 ~~~g~L~v~v~~a~~L~~~--~~~dpyv~v~~~~~~~kT~v~~~t~nP~w~e~f~f~v~~~~--~~~~l~v~V~d~~~~~ 490 (538)
...|.|.|+|++|++|+.. +.+||||++++++++++|++++++.||+|||.|+|.+.... ....|.|+|||++.
T Consensus 4 ~~~g~L~v~v~~a~~L~~~~~g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~-- 81 (140)
T 2dmh_A 4 GSSGMLRVIVESASNIPKTKFGKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFET-- 81 (140)
T ss_dssp CBCCEEEEEEEEEESCCCCSSSCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTC--
T ss_pred CCCcEEEEEEEEeeCCCCCCCCCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCC--
Confidence 4578999999999999864 47999999999999999999999999999999999997542 24689999999986
Q ss_pred cCCCCCceeEEEEEechhhcccceeceEEE---eCCCC----CcEEEEEEEEEeC
Q 009307 491 GLLHPKETLGYIDINLSDVVSNKRINEKYH---LIDSK----NGRIQIELQWRTA 538 (538)
Q Consensus 491 g~~~~d~~lG~~~i~l~~l~~~~~~~~~~~---L~~~~----~G~I~l~~~w~p~ 538 (538)
++++++||++.++|.++..+.....||+ |.+.. .|+|+++++|.|.
T Consensus 82 --~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p~ 134 (140)
T 2dmh_A 82 --IGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGYDPP 134 (140)
T ss_dssp --SSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEECCC
T ss_pred --CCCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEEECC
Confidence 5788999999999999988777788988 65543 4999999999984
No 14
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.79 E-value=8.2e-19 Score=155.02 Aligned_cols=113 Identities=16% Similarity=0.256 Sum_probs=99.5
Q ss_pred CCceEEEEEEEeeecCCCC-------------CCCCcEEEEEECCeE-EEeeeecCCCCCcccceEEEEecCCCCCCeEE
Q 009307 415 AGGGLLVVIVHEAQDVEGK-------------HHTNPYARILFRGEE-RKTKHVKKNRDPRWEEEFQFMLEEPPTNDRLH 480 (538)
Q Consensus 415 ~~~g~L~v~v~~a~~L~~~-------------~~~dpyv~v~~~~~~-~kT~v~~~t~nP~w~e~f~f~v~~~~~~~~l~ 480 (538)
...|.|+|+|.+|++|+.. +.+||||++.++++. .+|++++++.||+|||.|+|.+.+. ..|.
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~~---~~L~ 102 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTDG---GHLE 102 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE---CEEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCCC---CEEE
Confidence 4689999999999999853 358999999998876 5999999999999999999999753 5899
Q ss_pred EEEEEcccCccCCCCCceeEEEEEechhhccc----ceeceEEEeCCCCCcEEEEEEEEE
Q 009307 481 VEVCSVSSRIGLLHPKETLGYIDINLSDVVSN----KRINEKYHLIDSKNGRIQIELQWR 536 (538)
Q Consensus 481 v~V~d~~~~~g~~~~d~~lG~~~i~l~~l~~~----~~~~~~~~L~~~~~G~I~l~~~w~ 536 (538)
++|||++. +++|++||++.|+|.++..+ ...+.||+|. ++|+|+|+++|.
T Consensus 103 ~~V~D~d~----~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~--~~G~i~l~l~~~ 156 (157)
T 2fk9_A 103 LAVFHETP----LGYDHFVANCTLQFQELLRTTGASDTFEGWVDLE--PEGKVFVVITLT 156 (157)
T ss_dssp EEEEECCS----SSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECB--SSCEEEEEEEEC
T ss_pred EEEEECCC----CCCCCEEEEEEEEHHHhhcccCCCCcccEEEECC--CCcEEEEEEEEE
Confidence 99999875 67899999999999999865 5678999996 489999999985
No 15
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.78 E-value=2e-18 Score=147.99 Aligned_cols=116 Identities=18% Similarity=0.406 Sum_probs=102.2
Q ss_pred ceEEEEEEEeeecCCCC------CCCCcEEEEEECC---eEEEeeeecCCCCCcccceEEEEecCCCCCCeEEEEEEEcc
Q 009307 417 GGLLVVIVHEAQDVEGK------HHTNPYARILFRG---EERKTKHVKKNRDPRWEEEFQFMLEEPPTNDRLHVEVCSVS 487 (538)
Q Consensus 417 ~g~L~v~v~~a~~L~~~------~~~dpyv~v~~~~---~~~kT~v~~~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d~~ 487 (538)
.|.|.|+|++|++|+.. +.+||||++++++ ..++|++++++.||+|||.|.|.+... ....|.++|||++
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~~l~i~V~d~d 80 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPN-QENVLEITLMDAN 80 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTT-SCCEEEEEEEECC
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCC-CCCEEEEEEEECC
Confidence 68999999999999872 6899999999986 678999999999999999999999654 4568999999998
Q ss_pred cCccCCCCCceeEEEEEechhhcccceeceEEEeCCCCCcEEEEEEEEEeC
Q 009307 488 SRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDSKNGRIQIELQWRTA 538 (538)
Q Consensus 488 ~~~g~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~G~I~l~~~w~p~ 538 (538)
. + ++++||++.++|+++..+.....||+|.+.+.|.|+++++.-|+
T Consensus 81 ~----~-~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~g~i~~~le~~~~ 126 (126)
T 1rlw_A 81 Y----V-MDETLGTATFTVSSMKVGEKKEVPFIFNQVTEMVLEMSLEVASS 126 (126)
T ss_dssp S----S-CCEEEEEEEEEGGGSCTTCEEEEEEEETTTEEEEEEEEEECCCC
T ss_pred C----C-CCceeEEEEEEHHHccCCCcEEEEEEcCCCceEEEEEEEEeCCC
Confidence 5 3 48899999999999988888889999998778999999887653
No 16
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.78 E-value=2.4e-19 Score=159.17 Aligned_cols=111 Identities=14% Similarity=0.153 Sum_probs=95.5
Q ss_pred CCCCeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcC---ccCCeeeeeecCCCCCCeEecEEEEEeeCC--CCCEEEEE
Q 009307 255 YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITE---DKLPSKKTTVKHKNLNPEWNEEYNFTVRDP--ESQAVELA 329 (538)
Q Consensus 255 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~---~~~~~~~T~v~~~t~nP~w~e~f~f~v~~~--~~~~L~i~ 329 (538)
+....+.|+|+|++|+||+.+|..|.+||||++++.+ ....++||+++++|+||+|||+|.|.+... ....|.|+
T Consensus 38 y~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~ 117 (155)
T 2z0u_A 38 YDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVD 117 (155)
T ss_dssp EETTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEE
T ss_pred EcCCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEE
Confidence 4456799999999999999999999999999999976 333357999999999999999999998642 25689999
Q ss_pred EEeccCCCCCcccEEEEEeCccCCC-CCCeEEEEecc
Q 009307 330 VYDWEQVGKHDKMGMNVVPLKELTP-EEPSVKTLDLL 365 (538)
Q Consensus 330 v~d~~~~~~d~~lG~~~i~l~~l~~-~~~~~~~~~l~ 365 (538)
|||+|..++|++||++.++|.++.. +.....|++|.
T Consensus 118 V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 118 VCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp EEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred EEECCCCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 9999999999999999999999964 55667787763
No 17
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.78 E-value=1e-18 Score=152.97 Aligned_cols=112 Identities=34% Similarity=0.508 Sum_probs=97.9
Q ss_pred CCCCeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCccCCeeeeeecCCCCCCeEecEEEEEeeC---CCCCEEEEEEE
Q 009307 255 YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRD---PESQAVELAVY 331 (538)
Q Consensus 255 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~w~e~f~f~v~~---~~~~~L~i~v~ 331 (538)
+....+.|.|+|++|++|+.++..|.+||||++++.+.....++|++++++.||+|||+|.|.+.. .....|.|+||
T Consensus 21 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~ 100 (141)
T 2d8k_A 21 YNFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVL 100 (141)
T ss_dssp ECSSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEE
Confidence 445679999999999999999988999999999997544456799999999999999999998532 23578999999
Q ss_pred eccCCCCCcccEEEEEeCccCCCCCCeEEEEeccc
Q 009307 332 DWEQVGKHDKMGMNVVPLKELTPEEPSVKTLDLLK 366 (538)
Q Consensus 332 d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~ 366 (538)
|++.+++|++||++.+++.++..+.....|++|..
T Consensus 101 d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 135 (141)
T 2d8k_A 101 DYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKP 135 (141)
T ss_dssp ECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCEE
T ss_pred ECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECcC
Confidence 99999999999999999999998887888998854
No 18
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.78 E-value=1.3e-18 Score=157.23 Aligned_cols=125 Identities=18% Similarity=0.254 Sum_probs=102.3
Q ss_pred CCeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCccCCeeeeeecCCCCCCeEecEEEEEeeCCCCCEEEEEEEeccCC
Q 009307 257 RPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRDPESQAVELAVYDWEQV 336 (538)
Q Consensus 257 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~w~e~f~f~v~~~~~~~L~i~v~d~~~~ 336 (538)
...+.|.|+|++|++|+..+..+.+||||+++++++ .++|+++++++||+|||+|.|.+.. .+.|.|+|||+|.+
T Consensus 33 ~~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~---~~kT~v~~~tlnP~Wne~f~f~v~~--~~~L~~~V~D~d~~ 107 (173)
T 2nq3_A 33 TMKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQ---SKKTEKCNNTNSPKWKQPLTVIVTP--VSKLHFRVWSHQTL 107 (173)
T ss_dssp SCCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTE---EEECCCCSSCSSCEEEEEEEEEECT--TCEEEEEEEECCSS
T ss_pred CCceEEEEEEEEeECCCCcccCCCCCeEEEEEECCE---EeEccccCCCCCCeECCEEEEEeCC--CCEEEEEEEECCCC
Confidence 357899999999999994444456999999999873 4699999999999999999999853 78999999999999
Q ss_pred CCCcccEEEEEeCccCCCCCC-----eEEEEecccccccCCCCCCccccEEEEEEEEEec
Q 009307 337 GKHDKMGMNVVPLKELTPEEP-----SVKTLDLLKNMDLNDGQNEKSRGQLVVEFIYKPF 391 (538)
Q Consensus 337 ~~d~~lG~~~i~l~~l~~~~~-----~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~~~p~ 391 (538)
++|++||++.+++.++..+.. ...|++|... ..+....|+|.+.+.|.+.
T Consensus 108 ~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~-----~~~~~~~G~L~v~l~~l~~ 162 (173)
T 2nq3_A 108 KSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGD-----KEPTETIGDLSICLDGLQL 162 (173)
T ss_dssp SCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEES-----SCTTSEEEEEEEEEESEEC
T ss_pred CCCceEEEEEEEHHHhcccCCCCcceeEEEEECccC-----CCCCcccEEEEEEEeeeec
Confidence 999999999999999874321 2567777542 1134678999999999986
No 19
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.77 E-value=1.4e-18 Score=154.13 Aligned_cols=111 Identities=33% Similarity=0.498 Sum_probs=97.9
Q ss_pred CCCCeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCccCCeeeeeecCCCCCCeEecEEEEEeeCC--CCCEEEEEEEe
Q 009307 255 YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRDP--ESQAVELAVYD 332 (538)
Q Consensus 255 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~w~e~f~f~v~~~--~~~~L~i~v~d 332 (538)
+....+.|.|+|++|+||+..|..+.+||||++++.+.....++|++++++.||+|||+|.|.+... ....|.|+|||
T Consensus 37 y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 116 (152)
T 1rsy_A 37 YDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYD 116 (152)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEE
Confidence 4456799999999999999999889999999999975444567999999999999999999988642 36899999999
Q ss_pred ccCCCCCcccEEEEEeCccCCCCCCeEEEEecc
Q 009307 333 WEQVGKHDKMGMNVVPLKELTPEEPSVKTLDLL 365 (538)
Q Consensus 333 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~ 365 (538)
++.+++|++||++.+++.++..+.....|++|.
T Consensus 117 ~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 149 (152)
T 1rsy_A 117 FDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQ 149 (152)
T ss_dssp CCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECB
T ss_pred CCCCCCCcEEEEEEEEchhccCCCCcceEEECC
Confidence 999999999999999999998887788898874
No 20
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.77 E-value=1.1e-18 Score=153.09 Aligned_cols=111 Identities=33% Similarity=0.498 Sum_probs=98.3
Q ss_pred CCCCeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCccCCeeeeeecCCCCCCeEecEEEEEeeCC--CCCEEEEEEEe
Q 009307 255 YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRDP--ESQAVELAVYD 332 (538)
Q Consensus 255 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~w~e~f~f~v~~~--~~~~L~i~v~d 332 (538)
+....+.|.|+|++|++|+..+..+.+||||++++.+.....++|++++++.||+|||+|.|.+... ....|.|+|||
T Consensus 29 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 108 (143)
T 3f04_A 29 YDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYD 108 (143)
T ss_dssp EETTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEE
T ss_pred EeCCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEe
Confidence 4457799999999999999999889999999999965544567999999999999999999998643 35799999999
Q ss_pred ccCCCCCcccEEEEEeCccCCCCCCeEEEEecc
Q 009307 333 WEQVGKHDKMGMNVVPLKELTPEEPSVKTLDLL 365 (538)
Q Consensus 333 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~ 365 (538)
++.+++|++||++.++|.++..+.....|++|.
T Consensus 109 ~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 141 (143)
T 3f04_A 109 FDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQ 141 (143)
T ss_dssp CCSSSCCEEEEEEEEEGGGCCTTSCEEEEEECB
T ss_pred CCCCCCCceEEEEEEEHHHccCCCCcceEEECc
Confidence 999999999999999999999888888898874
No 21
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.77 E-value=2.7e-18 Score=148.77 Aligned_cols=109 Identities=25% Similarity=0.360 Sum_probs=94.3
Q ss_pred CCCeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCc--cCCeeeeeecCCCCCCeEecEEEEE-eeCC--CCCEEEEEE
Q 009307 256 RRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITED--KLPSKKTTVKHKNLNPEWNEEYNFT-VRDP--ESQAVELAV 330 (538)
Q Consensus 256 ~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~--~~~~~~T~v~~~t~nP~w~e~f~f~-v~~~--~~~~L~i~v 330 (538)
+...|.|.|+|++|+||+. +..|.+||||++++.+. ....++|+++++++||+|||+|.|. +... ....|.|+|
T Consensus 16 ~~~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V 94 (134)
T 2b3r_A 16 SYRNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSV 94 (134)
T ss_dssp EEETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEE
T ss_pred eecCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEE
Confidence 3456899999999999997 66789999999999543 2345799999999999999999999 7532 357999999
Q ss_pred EeccCCCCCcccEEEEEeCccCCCCCCeEEEEecc
Q 009307 331 YDWEQVGKHDKMGMNVVPLKELTPEEPSVKTLDLL 365 (538)
Q Consensus 331 ~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~ 365 (538)
||++.+++|++||++.++|.++..+.....|++|.
T Consensus 95 ~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~ 129 (134)
T 2b3r_A 95 LSAESLRENFFLGGITLPLKDFNLSKETVKWYQLT 129 (134)
T ss_dssp EECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECB
T ss_pred EECCCCCCCcEEEEEEEEhhhccCCCCcceeEECC
Confidence 99999999999999999999999888888898874
No 22
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.76 E-value=5.8e-18 Score=147.19 Aligned_cols=118 Identities=20% Similarity=0.421 Sum_probs=102.8
Q ss_pred CCceEEEEEEEeeecCCCC---CCCCcEEEEEECCeEEEeeeec-CCCCCcccceEEEEecCCCCCCeEEEEEEEcccCc
Q 009307 415 AGGGLLVVIVHEAQDVEGK---HHTNPYARILFRGEERKTKHVK-KNRDPRWEEEFQFMLEEPPTNDRLHVEVCSVSSRI 490 (538)
Q Consensus 415 ~~~g~L~v~v~~a~~L~~~---~~~dpyv~v~~~~~~~kT~v~~-~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d~~~~~ 490 (538)
...|.|+|+|++|++|+.. +.+||||+++++++.++|++++ ++.||+|||.|.|.+.+ ....|.++|||++.
T Consensus 7 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~--~~~~l~~~V~d~~~-- 82 (136)
T 1wfj_A 7 GPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSE--GTTELKAKIFDKDV-- 82 (136)
T ss_dssp CCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEES--SCCEEEEEECCSSS--
T ss_pred CCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECC--CCCEEEEEEEECCC--
Confidence 4689999999999999874 5789999999999999999998 89999999999999986 35689999999985
Q ss_pred cCCCCCceeEEEEEechhhcc-cceeceEEEeCCC--CCcEEEEEEEEEeC
Q 009307 491 GLLHPKETLGYIDINLSDVVS-NKRINEKYHLIDS--KNGRIQIELQWRTA 538 (538)
Q Consensus 491 g~~~~d~~lG~~~i~l~~l~~-~~~~~~~~~L~~~--~~G~I~l~~~w~p~ 538 (538)
+++|++||++.++|.++.. ......||+|... ..|+|+++++|.|.
T Consensus 83 --~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~~G~i~l~l~~~p~ 131 (136)
T 1wfj_A 83 --GTEDDAVGEATIPLEPVFVEGSIPPTAYNVVKDEEYKGEIWVALSFKPS 131 (136)
T ss_dssp --CTTTCCSEEEEEESHHHHHHSEEEEEEEEEEETTEEEEEEEEEEEEEEC
T ss_pred --CCCCceEEEEEEEHHHhccCCCCCcEEEEeecCCccCEEEEEEEEEEeC
Confidence 6789999999999999955 4446789999622 36999999999984
No 23
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.76 E-value=5.2e-18 Score=147.86 Aligned_cols=111 Identities=23% Similarity=0.428 Sum_probs=93.9
Q ss_pred CCCCeeEEEEEEEeecCCccCCCC-CCCCcEEEEEEcCccCCeeeeeecCCCCCCeEecEEEEE-eeCC--CCCEEEEEE
Q 009307 255 YRRPVGILHVKVVKAMNLKKKDLL-GASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFT-VRDP--ESQAVELAV 330 (538)
Q Consensus 255 ~~~~~g~L~V~v~~a~~L~~~d~~-g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~w~e~f~f~-v~~~--~~~~L~i~v 330 (538)
+....+.|.|+|++|+||+.+|.. |.+||||++++.+.....++|+++++++||+|||+|.|. +... ....|.|+|
T Consensus 17 y~~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V 96 (138)
T 1ugk_A 17 YNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTI 96 (138)
T ss_dssp EEGGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEE
T ss_pred EECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEE
Confidence 344678999999999999999985 899999999998644456899999999999999999996 5432 246899999
Q ss_pred EeccCCCCCcccEEEEEeCccCCCCCCe-EEEEecc
Q 009307 331 YDWEQVGKHDKMGMNVVPLKELTPEEPS-VKTLDLL 365 (538)
Q Consensus 331 ~d~~~~~~d~~lG~~~i~l~~l~~~~~~-~~~~~l~ 365 (538)
||++.+++|++||++.++|.++..+... ..|+++.
T Consensus 97 ~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~ 132 (138)
T 1ugk_A 97 LSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREII 132 (138)
T ss_dssp EEECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECB
T ss_pred EECCCCCCCcEEEEEEEehhHccCCCCcchhhhhhh
Confidence 9999999999999999999999876544 5667764
No 24
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.75 E-value=5.3e-18 Score=148.60 Aligned_cols=111 Identities=25% Similarity=0.443 Sum_probs=96.2
Q ss_pred CCCCeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCc--cCCeeeeeecCCCCCCeEecEEEEE-eeCC--CCCEEEEE
Q 009307 255 YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITED--KLPSKKTTVKHKNLNPEWNEEYNFT-VRDP--ESQAVELA 329 (538)
Q Consensus 255 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~--~~~~~~T~v~~~t~nP~w~e~f~f~-v~~~--~~~~L~i~ 329 (538)
+....+.|.|+|++|++|+.++..|.+||||++++.+. ....++|++++++.||+|||+|.|. +... ....|.|+
T Consensus 24 y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~ 103 (142)
T 2chd_A 24 YDQDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRIS 103 (142)
T ss_dssp EEGGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEE
T ss_pred EeCCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEE
Confidence 33567999999999999999998899999999999753 2345799999999999999999998 5322 13689999
Q ss_pred EEeccCCCCCcccEEEEEeCccCCCCCCeEEEEecc
Q 009307 330 VYDWEQVGKHDKMGMNVVPLKELTPEEPSVKTLDLL 365 (538)
Q Consensus 330 v~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~ 365 (538)
|||++..++|++||++.+++.++..++....|+.|.
T Consensus 104 V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~ 139 (142)
T 2chd_A 104 VCDEDKFGHNEFIGETRFSLKKLKANQRKNFNICLE 139 (142)
T ss_dssp EEEECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECB
T ss_pred EEECCCCCCCcEEEEEEEEHHHcCCCCccEEEEecc
Confidence 999999999999999999999999988888888874
No 25
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.74 E-value=2.7e-17 Score=146.00 Aligned_cols=118 Identities=22% Similarity=0.402 Sum_probs=98.3
Q ss_pred CCCceEEEEEEEeeecCCCC---CCCCcEEEEEECC------eEEEeeeecCCCCCcccceEEEEecCCCCCCeEEEEEE
Q 009307 414 PAGGGLLVVIVHEAQDVEGK---HHTNPYARILFRG------EERKTKHVKKNRDPRWEEEFQFMLEEPPTNDRLHVEVC 484 (538)
Q Consensus 414 ~~~~g~L~v~v~~a~~L~~~---~~~dpyv~v~~~~------~~~kT~v~~~t~nP~w~e~f~f~v~~~~~~~~l~v~V~ 484 (538)
....+.|+|+|++|++|+.. +.+||||++++.+ ..++|++++++.||+|||.|.|.+... ...|.++||
T Consensus 16 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~--~~~l~~~V~ 93 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ--QHRLLFEVF 93 (153)
T ss_dssp CTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTT--TCEEEEEEE
T ss_pred CCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCC--CCEEEEEEE
Confidence 34689999999999999864 5789999999974 456999999999999999999999763 468999999
Q ss_pred EcccCccCCCCCceeEEEEEechhhccccee------ceEEEeCCC-----CCcEEEEEEEEEe
Q 009307 485 SVSSRIGLLHPKETLGYIDINLSDVVSNKRI------NEKYHLIDS-----KNGRIQIELQWRT 537 (538)
Q Consensus 485 d~~~~~g~~~~d~~lG~~~i~l~~l~~~~~~------~~~~~L~~~-----~~G~I~l~~~w~p 537 (538)
|++. ++++++||++.++|+++...... .+||+|... ..|+|+++++|.|
T Consensus 94 d~d~----~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 94 DENR----LTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp ECCS----SSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEECC
T ss_pred ECCC----CcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEeC
Confidence 9985 67899999999999999875432 489999643 3699999999987
No 26
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.74 E-value=5.3e-17 Score=170.93 Aligned_cols=176 Identities=20% Similarity=0.250 Sum_probs=135.8
Q ss_pred eEEEEEEcCCCC-eEEEEEEEccccccc-cchHHHHHHHHHHHHHhhhccc-----CccccccccC--------------
Q 009307 192 FANIYVSLMEKP-HVDFGLKLVGADLMS-IPGLYRFVQELIKTQVANMYLW-----PKTLEVPILD-------------- 250 (538)
Q Consensus 192 ~~~~~~sf~~~P-~id~~~~~~g~~~~~-~P~l~~~i~~~i~~~l~~~~v~-----P~~~~~pi~~-------------- 250 (538)
+..|.=|+...| -|+|.+.|+ .++.. .+.....++.++.+++.+.-.+ |..-..+.+.
T Consensus 304 ~~~W~~Sv~~~P~~I~~~l~PI-~~Lv~~~~~kr~nLk~Ai~~Yl~e~~~c~~C~~PC~nn~~~l~g~~C~C~C~~~~~t 382 (540)
T 3nsj_A 304 FSTWTASLPSNPGLVDYSLEPL-HTLLEEQNPKREALRQAISHYIMSRARWQNCSRPCRSGQHKSSHDSCQCECQDSKVT 382 (540)
T ss_dssp HHHHHHHTTTSCEEEEEEEEEG-GGGSCTTCTHHHHHHHHHHHHHHHTCBCCCTTSCCBTTEEECSSCTTCEEESCTTTB
T ss_pred HHHHHHHHhhCCceEEEEEEEH-HHhcCCcHHHHHHHHHHHHHHHHhcCchhhhcccccCCCccCCCCceEeeCCCCCCc
Confidence 566667777788 559999998 55543 4566789999999999988776 4321111111
Q ss_pred -C-CccCCCCeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCccCCeeeeeecCCCCCCeEecEEEEEeeC-CCCCEEE
Q 009307 251 -P-SKAYRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRD-PESQAVE 327 (538)
Q Consensus 251 -~-~~~~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~w~e~f~f~v~~-~~~~~L~ 327 (538)
+ .++.....|.|+|+|++|++|+. |..|++||||+++++++. .+|+++++++||+|||+|.|.+.. ...+.|+
T Consensus 383 ~~~~C~~~~~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~---~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~ 458 (540)
T 3nsj_A 383 NQDCCPRQRGLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQE---FRTGVVWNNNNPRWTDKMDFENVLLSTGGPLR 458 (540)
T ss_dssp CGGGCBSSTTEEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEE---EECCCBCSCSSCBCCCCEEEEEEETTTCCCEE
T ss_pred ccccccccCcccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEe---eeeeeecCCCCCCCCeEEEEEEecCCCCCEEE
Confidence 1 11344568999999999999998 989999999999998754 699999999999999999998653 3578899
Q ss_pred EEEEeccCCCCCcccEEEEEeCccCCCCCCeEEEEecccccccCCCCCCccccEEEEEEEEE
Q 009307 328 LAVYDWEQVGKHDKMGMNVVPLKELTPEEPSVKTLDLLKNMDLNDGQNEKSRGQLVVEFIYK 389 (538)
Q Consensus 328 i~v~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~~~ 389 (538)
|+|||+|..++||+||++.++|.. ..++.|..+ ..|+|+++++..
T Consensus 459 ~~V~D~D~~~~dD~LG~~~~~L~~----g~~~~~~~l-------------~~G~l~~~~~~~ 503 (540)
T 3nsj_A 459 VQVWDADYGWDDDLLGSCDRSPHS----GFHEVTCEL-------------NHGRVKFSYHAK 503 (540)
T ss_dssp EEEEECCSSSCCEEEEEEEECCCS----EEEEEEEEC-------------SSSEEEEEEEEE
T ss_pred EEEEECCCCCCCCEEEEEEEEeeC----CcEEEEEEc-------------CCeEEEEEEEEE
Confidence 999999999999999999999872 234556543 358888887644
No 27
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.74 E-value=7.2e-18 Score=145.12 Aligned_cols=109 Identities=19% Similarity=0.375 Sum_probs=87.8
Q ss_pred CCCCeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCcc--CCeeeeeecCCCCCCeEecEEEEEeeC---CCCCEEEEE
Q 009307 255 YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDK--LPSKKTTVKHKNLNPEWNEEYNFTVRD---PESQAVELA 329 (538)
Q Consensus 255 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~--~~~~~T~v~~~t~nP~w~e~f~f~v~~---~~~~~L~i~ 329 (538)
+....|.|.|+|++|+||+.++..|.+||||++++.+.. ...++|++++++.||+|||+|.|.+.. .....|.|+
T Consensus 13 y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~ 92 (129)
T 2bwq_A 13 FDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEIT 92 (129)
T ss_dssp EETTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEE
T ss_pred EccCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEE
Confidence 345679999999999999999988999999999995432 345799999999999999999999532 235799999
Q ss_pred EEeccCCCC--CcccEEEEEeCccCCCCCCeEEEEec
Q 009307 330 VYDWEQVGK--HDKMGMNVVPLKELTPEEPSVKTLDL 364 (538)
Q Consensus 330 v~d~~~~~~--d~~lG~~~i~l~~l~~~~~~~~~~~l 364 (538)
|||++..++ |++||++.+++.++.... ...|++|
T Consensus 93 V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L 128 (129)
T 2bwq_A 93 LWDQARVREEESEFLGEILIELETALLDD-EPHWYKL 128 (129)
T ss_dssp EEEC-------CEEEEEEEEEGGGCCCSS-CEEEEEC
T ss_pred EEECCcCcCcCCceeEEEEEEccccCCCc-CCccEEC
Confidence 999999887 999999999999987654 6677765
No 28
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.74 E-value=1.4e-17 Score=147.88 Aligned_cols=123 Identities=24% Similarity=0.387 Sum_probs=101.3
Q ss_pred CccccEEEEEEEEEeccCCCCCCccccccccccCCCCCCCCceEEEEEEEeeecCCCC--CCCCcEEEEEEC-----CeE
Q 009307 376 EKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK--HHTNPYARILFR-----GEE 448 (538)
Q Consensus 376 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~--~~~dpyv~v~~~-----~~~ 448 (538)
....|++.+++.|.+ ..+.|.|+|++|++|+.. +.+||||++++. ...
T Consensus 10 ~~~~G~~~lsL~y~~-------------------------~~~~L~V~v~~a~~L~~~d~g~~Dpyv~v~l~~~~~~~~~ 64 (153)
T 3fbk_A 10 HKVQGAGQLRLSIDA-------------------------QDRVLLLHIIEGKGLISKQPGTCDPYVKISLIPEDSRLRH 64 (153)
T ss_dssp ---CCCCEEEEEEEE-------------------------SSSEEEEEEEEEESCCCCSSSCCCEEEEEEEESCSCCTTC
T ss_pred cCCCCEEEEEEEEEC-------------------------CCCEEEEEEEEeeCCCCCCCCCCCEEEEEEEEcCCCCccE
Confidence 567899999999997 378999999999999764 578999999993 345
Q ss_pred EEeeeecCCCCCcccceEEEEecCCCCCCeEEEEEEEcccCccCCCC-CceeEEEEEechhhcc-cceeceEEEeCCCCC
Q 009307 449 RKTKHVKKNRDPRWEEEFQFMLEEPPTNDRLHVEVCSVSSRIGLLHP-KETLGYIDINLSDVVS-NKRINEKYHLIDSKN 526 (538)
Q Consensus 449 ~kT~v~~~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d~~~~~g~~~~-d~~lG~~~i~l~~l~~-~~~~~~~~~L~~~~~ 526 (538)
++|++++++.||+|||.|.|.+........|.|+|||++. +++ |++||++.++|+++.. +....+||+|.+...
T Consensus 65 ~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~----~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~~ 140 (153)
T 3fbk_A 65 QKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRAS----QSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEHL 140 (153)
T ss_dssp EECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEECCS----SGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTTG
T ss_pred EeccccCCCCCCccccEEEEecccHHhCCEEEEEEEeCCC----CCCCCcEEEEEEEEHHHhcCCCCccccEEECCChhh
Confidence 7999999999999999999998543344579999999985 455 8999999999999985 567789999987654
Q ss_pred c
Q 009307 527 G 527 (538)
Q Consensus 527 G 527 (538)
|
T Consensus 141 g 141 (153)
T 3fbk_A 141 G 141 (153)
T ss_dssp G
T ss_pred c
Confidence 3
No 29
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.74 E-value=1e-17 Score=145.71 Aligned_cols=119 Identities=22% Similarity=0.463 Sum_probs=101.4
Q ss_pred cccEEEEEEEEEeccCCCCCCccccccccccCCCCCCCCceEEEEEEEeeecCCCC---CCCCcEEEEEE-----CCeEE
Q 009307 378 SRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILF-----RGEER 449 (538)
Q Consensus 378 ~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~---~~~dpyv~v~~-----~~~~~ 449 (538)
..|+|.+++.|. .+.|.|+|++|++|+.. +.+||||++++ +...+
T Consensus 3 ~~G~l~~~l~~~---------------------------~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~ 55 (137)
T 3rdl_A 3 KRGRIYLKAEVT---------------------------DEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQ 55 (137)
T ss_dssp CCCEEEEEEEEE---------------------------TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCE
T ss_pred cceEEEEEEEEc---------------------------CCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeee
Confidence 579999999983 57899999999999863 57899999999 45668
Q ss_pred EeeeecCCCCCcccceEEEEecCCCCCCeEEEEEEEcccCccCCCCCceeEEEEEechhhcccceeceEEEeCCCCCcE
Q 009307 450 KTKHVKKNRDPRWEEEFQFMLEEPPTNDRLHVEVCSVSSRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDSKNGR 528 (538)
Q Consensus 450 kT~v~~~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d~~~~~g~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~G~ 528 (538)
+|++++++.||.|||.|.|.+........|.++|||++. ++++++||++.++|+++.... ..+||+|.+...|+
T Consensus 56 kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d~----~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~~~g~ 129 (137)
T 3rdl_A 56 KTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDR----TTRNDFMGSLSFGVSELMKMP-ASGWYKLLNQEEGE 129 (137)
T ss_dssp ECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECCS----SSCCEEEEEEEEEHHHHHHSC-EEEEEECBCHHHHT
T ss_pred cCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECCC----CCCCceEEEEEEeHHHhccCc-cCceEECcCccccc
Confidence 999999999999999999998754334589999999875 578999999999999998766 68999998765443
No 30
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.74 E-value=4.1e-17 Score=142.10 Aligned_cols=121 Identities=17% Similarity=0.134 Sum_probs=101.9
Q ss_pred CccccEEEEEEEEEeccCCCCCCccccccccccCCCCCCCCceEEEEEEEeeecCCCCCCCCcEEEEEEC---C-eEEEe
Q 009307 376 EKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGKHHTNPYARILFR---G-EERKT 451 (538)
Q Consensus 376 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~~~~dpyv~v~~~---~-~~~kT 451 (538)
....|+|++++.|.+ ..+.|+|+|++|++....+.+||||++++. + ..++|
T Consensus 9 ~~~~G~l~~sl~y~~-------------------------~~~~L~V~v~~a~~~d~~g~sDPyv~v~l~~~~~~~~~kT 63 (138)
T 1wfm_A 9 WNQAPKLHYCLDYDC-------------------------QKAELFVTRLEAVTSNHDGGCDCYVQGSVANRTGSVEAQT 63 (138)
T ss_dssp CSSCCEEEEEEEEET-------------------------TTTEEEEEEEEEECCCCSSCCCEEEEEEEEETTEEEEEEC
T ss_pred CCcceEEEEEEEEeC-------------------------CCCEEEEEEEEEEcCCCCCCcceEEEEEEEcCCCcccEec
Confidence 456899999999984 377999999999976666789999999994 2 24699
Q ss_pred eeecCCCCCcccceEEEEecCCCC-CCeEEEEEEEcccCccCCCCCceeEEEEEechhhcccceeceEEEeCCCC
Q 009307 452 KHVKKNRDPRWEEEFQFMLEEPPT-NDRLHVEVCSVSSRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDSK 525 (538)
Q Consensus 452 ~v~~~t~nP~w~e~f~f~v~~~~~-~~~l~v~V~d~~~~~g~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~ 525 (538)
++++++.||+|||.|.|.+..... ...|.++|||++. ++++++||++.++|.++.......+||+|....
T Consensus 64 ~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d~----~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 134 (138)
T 1wfm_A 64 ALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDR----FSRHSVAGELRLGLDGTSVPLGAAQWGELKTSG 134 (138)
T ss_dssp CCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECCS----SCTTSCSEEEEEESSSSSSCTTCCEEEECCCCS
T ss_pred ccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECCC----CCCCcEEEEEEEEcccccCcccccceeeCcCCC
Confidence 999999999999999999875422 3589999999986 678999999999999997656678999998753
No 31
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.74 E-value=1.3e-17 Score=145.25 Aligned_cols=109 Identities=17% Similarity=0.263 Sum_probs=92.5
Q ss_pred CCCCeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCc-cCCeeeeeecCCCCCCeEecEEEEEeeCCC--CCEEEEEEE
Q 009307 255 YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITED-KLPSKKTTVKHKNLNPEWNEEYNFTVRDPE--SQAVELAVY 331 (538)
Q Consensus 255 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~-~~~~~~T~v~~~t~nP~w~e~f~f~v~~~~--~~~L~i~v~ 331 (538)
+....+.|+|+|++|++ +|..|.+||||++++.+. ....++|+++++++||+|||+|.|.+.... ...|.|+||
T Consensus 21 y~~~~~~L~V~v~~a~~---~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~ 97 (138)
T 1wfm_A 21 YDCQKAELFVTRLEAVT---SNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLR 97 (138)
T ss_dssp EETTTTEEEEEEEEEEC---CCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEE
T ss_pred EeCCCCEEEEEEEEEEc---CCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEE
Confidence 44567999999999993 677899999999999642 233469999999999999999999986432 568999999
Q ss_pred eccCCCCCcccEEEEEeCccCCCCCCeEEEEeccc
Q 009307 332 DWEQVGKHDKMGMNVVPLKELTPEEPSVKTLDLLK 366 (538)
Q Consensus 332 d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~ 366 (538)
|+|.+++|++||++.++|.++..+.....|++|..
T Consensus 98 d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~ 132 (138)
T 1wfm_A 98 TCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKT 132 (138)
T ss_dssp ECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCC
T ss_pred ECCCCCCCcEEEEEEEEcccccCcccccceeeCcC
Confidence 99999999999999999999987667778888753
No 32
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.74 E-value=5.3e-18 Score=149.49 Aligned_cols=111 Identities=29% Similarity=0.410 Sum_probs=93.5
Q ss_pred CCCCeeEEEEEEEeecCCccC-CC------CCCCCcEEEEEEcCccCCeeeeeecCCCCCCeEecEEEEEeeCC--CCCE
Q 009307 255 YRRPVGILHVKVVKAMNLKKK-DL------LGASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRDP--ESQA 325 (538)
Q Consensus 255 ~~~~~g~L~V~v~~a~~L~~~-d~------~g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~w~e~f~f~v~~~--~~~~ 325 (538)
+....+.|.|+|++|+||+.+ +. .|.+||||++++.+.....++|++++++.||+|||+|.|.+... ....
T Consensus 21 y~~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~ 100 (147)
T 2enp_A 21 YDLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRT 100 (147)
T ss_dssp EETTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSE
T ss_pred EcCCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCE
Confidence 445679999999999999984 33 35899999999986544467999999999999999999998642 2468
Q ss_pred EEEEEEeccCCCCCcccEEEEEeCccCCCCCCeEEEEecc
Q 009307 326 VELAVYDWEQVGKHDKMGMNVVPLKELTPEEPSVKTLDLL 365 (538)
Q Consensus 326 L~i~v~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~ 365 (538)
|.|+|||++.+++|++||++.++|.++........|+.|.
T Consensus 101 L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~ 140 (147)
T 2enp_A 101 LLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALI 140 (147)
T ss_dssp EEEEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCB
T ss_pred EEEEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEee
Confidence 9999999999999999999999999998776666777764
No 33
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.74 E-value=2.7e-17 Score=142.95 Aligned_cols=114 Identities=16% Similarity=0.311 Sum_probs=98.8
Q ss_pred CceEEEEEEEeeecCCCCC---C-----------CCcEEEEEECCeE-EEeeeecCCCCCcccceEEEEecCCCCCCeEE
Q 009307 416 GGGLLVVIVHEAQDVEGKH---H-----------TNPYARILFRGEE-RKTKHVKKNRDPRWEEEFQFMLEEPPTNDRLH 480 (538)
Q Consensus 416 ~~g~L~v~v~~a~~L~~~~---~-----------~dpyv~v~~~~~~-~kT~v~~~t~nP~w~e~f~f~v~~~~~~~~l~ 480 (538)
..|.|+|+|++|++|+..+ . +||||++++++.. .+|++++++.||+|||.|+|.+.+. ..|.
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~---~~L~ 80 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG---RKIE 80 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE---CEEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC---CEEE
Confidence 4789999999999998632 2 8999999998765 5999999999999999999999763 6899
Q ss_pred EEEEEcccCccCCCCCceeEEEEEechhhcccc--eeceEEEeCCCCCcEEEEEEEEEeC
Q 009307 481 VEVCSVSSRIGLLHPKETLGYIDINLSDVVSNK--RINEKYHLIDSKNGRIQIELQWRTA 538 (538)
Q Consensus 481 v~V~d~~~~~g~~~~d~~lG~~~i~l~~l~~~~--~~~~~~~L~~~~~G~I~l~~~w~p~ 538 (538)
++|||++. +++|++||++.++|+++..+. ..+.|++|. +.|+|+|+++|.++
T Consensus 81 ~~V~d~d~----~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~--~~G~i~l~l~~~~~ 134 (136)
T 1gmi_A 81 LAVFHDAP----IGYDDFVANCTIQFEELLQNGSRHFEDWIDLE--PEGKVYVIIDLSGS 134 (136)
T ss_dssp EEEEECCS----SSSCEEEEEEEEEHHHHTSTTCSEEEEEEECB--SSCEEEEEEEEEEE
T ss_pred EEEEeCCC----CCCCCEEEEEEEEHHHhcccCCCCccEEEEcC--CCeEEEEEEEEEec
Confidence 99999985 678999999999999998753 457899986 48999999999863
No 34
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.74 E-value=1.7e-17 Score=143.53 Aligned_cols=115 Identities=25% Similarity=0.407 Sum_probs=100.7
Q ss_pred CCceEEEEEEEeeecCCCC---CCCCcEEEEEECCeEEEeeeecCCCCCcccceEEEEecCCCCCCeEEEEEEEcccCcc
Q 009307 415 AGGGLLVVIVHEAQDVEGK---HHTNPYARILFRGEERKTKHVKKNRDPRWEEEFQFMLEEPPTNDRLHVEVCSVSSRIG 491 (538)
Q Consensus 415 ~~~g~L~v~v~~a~~L~~~---~~~dpyv~v~~~~~~~kT~v~~~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d~~~~~g 491 (538)
...|.|+|+|++|++|+.. +.+||||+++++++.++|++++++.||.|||.|.|.+.+. ...|.++|||++.
T Consensus 10 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~--~~~l~i~V~d~d~--- 84 (133)
T 2ep6_A 10 KDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDI--HDVLEVTVFDEDG--- 84 (133)
T ss_dssp CCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCT--TCEEEEEEEEEET---
T ss_pred CCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCC--CCEEEEEEEECCC---
Confidence 4689999999999999864 5789999999999999999999999999999999999863 4689999999986
Q ss_pred CCCCCceeEEEEEechhhcccceeceEEEeCCC-----CCcEEEEEEEEEe
Q 009307 492 LLHPKETLGYIDINLSDVVSNKRINEKYHLIDS-----KNGRIQIELQWRT 537 (538)
Q Consensus 492 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~-----~~G~I~l~~~w~p 537 (538)
++++++||++.++|.++..+. .+||+|.+. ..|+|+|+++|-.
T Consensus 85 -~~~~~~lG~~~i~l~~l~~~~--~~w~~L~~~~~~~~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 85 -DKPPDFLGKVAIPLLSIRDGQ--PNCYVLKNKDLEQAFKGVIYLEMDLIY 132 (133)
T ss_dssp -TEEEEECCBCEEEGGGCCSSC--CEECCCBCSCTTSCCSSEEEEEEEEEE
T ss_pred -CCCCCeeEEEEEEHHHccCCC--ceEEEeecCCCCCccceEEEEEEEEEe
Confidence 567899999999999997644 589999753 4699999999864
No 35
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.73 E-value=3.7e-18 Score=150.66 Aligned_cols=112 Identities=21% Similarity=0.377 Sum_probs=97.0
Q ss_pred CCCCeeEEEEEEEeecCCccCC-CCCCCCcEEEEEEcCcc--CCeeeeeecCCCCCCeEecEEEEEeeCCC--CCEEEEE
Q 009307 255 YRRPVGILHVKVVKAMNLKKKD-LLGASDPYVKLKITEDK--LPSKKTTVKHKNLNPEWNEEYNFTVRDPE--SQAVELA 329 (538)
Q Consensus 255 ~~~~~g~L~V~v~~a~~L~~~d-~~g~~dpyv~v~~~~~~--~~~~~T~v~~~t~nP~w~e~f~f~v~~~~--~~~L~i~ 329 (538)
+....|.|.|+|++|+||+.++ ..|.+||||++++.+.. ...++|+++++++||+|||+|.|.+.... ...|.|+
T Consensus 18 y~~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~ 97 (148)
T 3fdw_A 18 YEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFS 97 (148)
T ss_dssp EETTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEE
T ss_pred EeCCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEE
Confidence 4456799999999999999888 57899999999997543 23679999999999999999999986542 4579999
Q ss_pred EEeccCCCCCcccEEEEEeCccCCCCCCeEEEEeccc
Q 009307 330 VYDWEQVGKHDKMGMNVVPLKELTPEEPSVKTLDLLK 366 (538)
Q Consensus 330 v~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~ 366 (538)
|||+|..++|++||++.++|.++..+.....|++|..
T Consensus 98 V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 134 (148)
T 3fdw_A 98 VWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHG 134 (148)
T ss_dssp EEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBC
T ss_pred EEECCCCcCCcEEEEEEEEcccccccCCccceEECcC
Confidence 9999999999999999999999987777788998854
No 36
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.73 E-value=8.7e-17 Score=141.85 Aligned_cols=117 Identities=22% Similarity=0.389 Sum_probs=99.0
Q ss_pred CCceEEEEEEEeeecCCCC---CCCCcEEEEEECCeEEEeeeecCCCCCcccceEEEEecCCCCCCeEEEEEEEcccC--
Q 009307 415 AGGGLLVVIVHEAQDVEGK---HHTNPYARILFRGEERKTKHVKKNRDPRWEEEFQFMLEEPPTNDRLHVEVCSVSSR-- 489 (538)
Q Consensus 415 ~~~g~L~v~v~~a~~L~~~---~~~dpyv~v~~~~~~~kT~v~~~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d~~~~-- 489 (538)
...|.|+|+|++|++|+.. +.+||||++++++..++|++++++.||.|||.|.|.+... .+.|.++|||++..
T Consensus 14 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~--~~~l~~~v~d~d~~~~ 91 (148)
T 3kwu_A 14 KWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNS--SDRIKVRVLDEDDDIK 91 (148)
T ss_dssp -CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECST--TCEEEEEEEECCCSHH
T ss_pred ccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCC--CCEEEEEEEECCCCcc
Confidence 4579999999999999864 5799999999999999999999999999999999999764 36899999999851
Q ss_pred ------ccCCCCCceeEEEEEechhhcccceeceEEEeCCC-----CCcEEEEEEEEE
Q 009307 490 ------IGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDS-----KNGRIQIELQWR 536 (538)
Q Consensus 490 ------~g~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~-----~~G~I~l~~~w~ 536 (538)
.+ .+.+++||++.++|+++. ....+||+|... ..|+|+|+++|.
T Consensus 92 ~~~~~~~~-~~~~~~lG~~~i~l~~l~--~~~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 92 SRVKQRFK-RESDDFLGQTIIEVRTLS--GEMDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp HHHHTTTS-SCSSEEEEEEEEEGGGCC--SEEEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred cccccccc-CCCCccEEEEEEEHHHCc--CCCCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 00 157999999999999983 455799999743 369999999885
No 37
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.73 E-value=2.1e-17 Score=144.56 Aligned_cols=122 Identities=27% Similarity=0.476 Sum_probs=101.5
Q ss_pred CccccEEEEEEEEEeccCCCCCCccccccccccCCCCCCCCceEEEEEEEeeecCCCC---CCCCcEEEEEE-----CCe
Q 009307 376 EKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILF-----RGE 447 (538)
Q Consensus 376 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~---~~~dpyv~v~~-----~~~ 447 (538)
+...|+|.+++.|.+ ..+.|.|+|++|++|+.. +.+||||++++ ...
T Consensus 4 ~~~~G~i~~~l~y~~-------------------------~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~ 58 (141)
T 1v27_A 4 GSSGGQLSIKLWFDK-------------------------VGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKN 58 (141)
T ss_dssp CCCCCEEEEEEEEET-------------------------TTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSS
T ss_pred CCcccEEEEEEEEeC-------------------------CCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCc
Confidence 567899999999985 367999999999999864 56899999999 345
Q ss_pred EEEeeeecCCCCCcccceEEEEecCCC--CCCeEEEEEEEcccCccCCCC--CceeEEEEEechhhcccceeceEEEeCC
Q 009307 448 ERKTKHVKKNRDPRWEEEFQFMLEEPP--TNDRLHVEVCSVSSRIGLLHP--KETLGYIDINLSDVVSNKRINEKYHLID 523 (538)
Q Consensus 448 ~~kT~v~~~t~nP~w~e~f~f~v~~~~--~~~~l~v~V~d~~~~~g~~~~--d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 523 (538)
.++|++++++.||+|||.|.|.+.... ....|.|+|||++. ++. +++||++.++|.++.... ..+||+|..
T Consensus 59 ~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~----~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~ 133 (141)
T 1v27_A 59 KRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQAR----VREEESEFLGEILIELETALLDD-EPHWYKLQT 133 (141)
T ss_dssp CCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEEBCS----SSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBC
T ss_pred ceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEECCC----CcCCCCceEEEEEEEccccCCCC-CCceEECcc
Confidence 679999999999999999999853221 23589999999986 455 899999999999987655 689999987
Q ss_pred CCCc
Q 009307 524 SKNG 527 (538)
Q Consensus 524 ~~~G 527 (538)
...|
T Consensus 134 ~~~g 137 (141)
T 1v27_A 134 HDSG 137 (141)
T ss_dssp CSSC
T ss_pred cccC
Confidence 6544
No 38
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.73 E-value=9.3e-18 Score=148.28 Aligned_cols=122 Identities=22% Similarity=0.482 Sum_probs=102.0
Q ss_pred CccccEEEEEEEEEeccCCCCCCccccccccccCCCCCCCCceEEEEEEEeeecCCCC---CCCCcEEEEEECC-----e
Q 009307 376 EKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILFRG-----E 447 (538)
Q Consensus 376 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~---~~~dpyv~v~~~~-----~ 447 (538)
....|+|.+++.|. .+.|.|+|++|++|+.. +.+||||++++.+ .
T Consensus 16 ~~~~G~l~~~l~~~---------------------------~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~ 68 (149)
T 1a25_A 16 MERRGRIYIQAHID---------------------------REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSES 68 (149)
T ss_dssp -CTTCEEEEEEEES---------------------------SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSS
T ss_pred CCcceEEEEEEEec---------------------------CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcc
Confidence 34679999999873 46799999999999864 5789999999973 5
Q ss_pred EEEeeeecCCCCCcccceEEEEecCCCCCCeEEEEEEEcccCccCCCCCceeEEEEEechhhcccceeceEEEeCCCCCc
Q 009307 448 ERKTKHVKKNRDPRWEEEFQFMLEEPPTNDRLHVEVCSVSSRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDSKNG 527 (538)
Q Consensus 448 ~~kT~v~~~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d~~~~~g~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~G 527 (538)
.++|++++++.||+|||.|.|.+........|.|+|||++. ++++++||++.++|.++... ...+||+|.+...|
T Consensus 69 ~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~----~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~~~~g 143 (149)
T 1a25_A 69 KQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL----TSRNDFMGSLSFGISELQKA-GVDGWFKLLSQEEG 143 (149)
T ss_dssp CEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCS----SSCCEEEEEEEEEHHHHTTC-CEEEEEECBCHHHH
T ss_pred eEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCC----CCCCCEEEEEEEEHHHhCcC-ccCCeEEccCCCCC
Confidence 67999999999999999999999764334589999999986 57899999999999999875 46799999876556
Q ss_pred EE
Q 009307 528 RI 529 (538)
Q Consensus 528 ~I 529 (538)
++
T Consensus 144 ~~ 145 (149)
T 1a25_A 144 EY 145 (149)
T ss_dssp TT
T ss_pred cc
Confidence 54
No 39
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.73 E-value=2.3e-17 Score=145.62 Aligned_cols=121 Identities=20% Similarity=0.308 Sum_probs=102.8
Q ss_pred CccccEEEEEEEEEeccCCCCCCccccccccccCCCCCCCCceEEEEEEEeeecCCC----CCCCCcEEEEEECC-----
Q 009307 376 EKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEG----KHHTNPYARILFRG----- 446 (538)
Q Consensus 376 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~----~~~~dpyv~v~~~~----- 446 (538)
...+|+|.+++.|.+ ..+.|.|+|++|++|+. .+.+||||++++..
T Consensus 6 ~~~~G~l~~sl~y~~-------------------------~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~ 60 (148)
T 3fdw_A 6 IFVTGRIAFSLKYEQ-------------------------QTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQ 60 (148)
T ss_dssp CCCCCEEEEEEEEET-------------------------TTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGG
T ss_pred CccceEEEEEEEEeC-------------------------CCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCccc
Confidence 457899999999985 37899999999999984 35799999999962
Q ss_pred eEEEeeeecCCCCCcccceEEEEecCCCC-CCeEEEEEEEcccCccCCCCCceeEEEEEechhhcccceeceEEEeCCCC
Q 009307 447 EERKTKHVKKNRDPRWEEEFQFMLEEPPT-NDRLHVEVCSVSSRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDSK 525 (538)
Q Consensus 447 ~~~kT~v~~~t~nP~w~e~f~f~v~~~~~-~~~l~v~V~d~~~~~g~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~ 525 (538)
..++|++++++.||+|||.|.|.+..... ...|.|+|||++. ++++++||++.++|+++..+....+||+|.+.+
T Consensus 61 ~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~d~----~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 136 (148)
T 3fdw_A 61 GKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHHGR----FGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKI 136 (148)
T ss_dssp GEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEECG----GGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC-
T ss_pred CccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEECCC----CcCCcEEEEEEEEcccccccCCccceEECcCcc
Confidence 36799999999999999999999876422 3479999999986 578999999999999998777778999998653
No 40
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.73 E-value=2.1e-17 Score=146.06 Aligned_cols=108 Identities=33% Similarity=0.538 Sum_probs=93.6
Q ss_pred CeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCcc--CCeeeeeecCCCCCCeEecEEEEEeeCCC-CCEEEEEEEecc
Q 009307 258 PVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDK--LPSKKTTVKHKNLNPEWNEEYNFTVRDPE-SQAVELAVYDWE 334 (538)
Q Consensus 258 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~--~~~~~T~v~~~t~nP~w~e~f~f~v~~~~-~~~L~i~v~d~~ 334 (538)
..+.|.|+|++|++|+.++..+.+||||++++.+.. ...++|++++++.||+|||+|.|.+.... ...|.|+|||++
T Consensus 29 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d 108 (149)
T 1a25_A 29 DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWD 108 (149)
T ss_dssp SSSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECC
Confidence 357899999999999999988999999999998532 34579999999999999999999987542 468999999999
Q ss_pred CCCCCcccEEEEEeCccCCCCCCeEEEEeccc
Q 009307 335 QVGKHDKMGMNVVPLKELTPEEPSVKTLDLLK 366 (538)
Q Consensus 335 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~ 366 (538)
..++|++||++.+++.++..+ ....|++|..
T Consensus 109 ~~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~ 139 (149)
T 1a25_A 109 LTSRNDFMGSLSFGISELQKA-GVDGWFKLLS 139 (149)
T ss_dssp SSSCCEEEEEEEEEHHHHTTC-CEEEEEECBC
T ss_pred CCCCCCEEEEEEEEHHHhCcC-ccCCeEEccC
Confidence 999999999999999999876 4677888743
No 41
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.73 E-value=9.4e-18 Score=147.00 Aligned_cols=111 Identities=27% Similarity=0.334 Sum_probs=92.9
Q ss_pred CCCCeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCcc--CCeeeeeecCCCCCCeEecEEEEEeeCC--CCCEEEEEE
Q 009307 255 YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDK--LPSKKTTVKHKNLNPEWNEEYNFTVRDP--ESQAVELAV 330 (538)
Q Consensus 255 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~--~~~~~T~v~~~t~nP~w~e~f~f~v~~~--~~~~L~i~v 330 (538)
+....+.|.|+|++|+||+.++..| +||||++++.+.. ...++|+++++++||+|||+|.|.+... ....|.|+|
T Consensus 19 y~~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V 97 (142)
T 2dmg_A 19 HSSQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAV 97 (142)
T ss_dssp EETTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEE
Confidence 3456789999999999999999888 9999999996532 2467999999999999999999998532 246899999
Q ss_pred EeccCCCC--CcccEEEEEeCccCCCCCCeEEEEeccc
Q 009307 331 YDWEQVGK--HDKMGMNVVPLKELTPEEPSVKTLDLLK 366 (538)
Q Consensus 331 ~d~~~~~~--d~~lG~~~i~l~~l~~~~~~~~~~~l~~ 366 (538)
||++.+++ |++||++.+++.++..+.....|++|..
T Consensus 98 ~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~ 135 (142)
T 2dmg_A 98 KNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTE 135 (142)
T ss_dssp EECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBC
T ss_pred EECCCccccCCcEEEEEEEecccccccccccceeeccC
Confidence 99998763 5799999999999987766777887743
No 42
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.73 E-value=2.4e-17 Score=146.13 Aligned_cols=120 Identities=18% Similarity=0.303 Sum_probs=102.0
Q ss_pred CccccEEEEEEEEEeccCCCCCCccccccccccCCCCCCCCceEEEEEEEeeecCCCC---CCCCcEEEEEEC---CeEE
Q 009307 376 EKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILFR---GEER 449 (538)
Q Consensus 376 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~---~~~dpyv~v~~~---~~~~ 449 (538)
....|+|.+++.|.+ ..+.|+|+|++|++|+.. +.+||||++++. .+.+
T Consensus 25 ~~~~G~l~~~l~y~~-------------------------~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~ 79 (152)
T 1rsy_A 25 EEKLGKLQYSLDYDF-------------------------QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKF 79 (152)
T ss_dssp -CCCCEEEEEEEEET-------------------------TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCE
T ss_pred CCCceEEEEEEEEeC-------------------------CCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceE
Confidence 456899999999985 368999999999999864 578999999994 4567
Q ss_pred EeeeecCCCCCcccceEEEEecCCC-CCCeEEEEEEEcccCccCCCCCceeEEEEEechhhcccceeceEEEeCCC
Q 009307 450 KTKHVKKNRDPRWEEEFQFMLEEPP-TNDRLHVEVCSVSSRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDS 524 (538)
Q Consensus 450 kT~v~~~t~nP~w~e~f~f~v~~~~-~~~~l~v~V~d~~~~~g~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 524 (538)
+|++++++.||+|||.|.|.+.... ....|.|+|||++. ++++++||++.++|+++..+....+||+|.++
T Consensus 80 kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~----~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 151 (152)
T 1rsy_A 80 ETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR----FSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSA 151 (152)
T ss_dssp ECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS----SSCCEEEEEEEEEGGGCCCSSCEEEEEECBCC
T ss_pred eccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECCC----CCCCcEEEEEEEEchhccCCCCcceEEECCCC
Confidence 9999999999999999999886321 23689999999985 67899999999999999877778899999764
No 43
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.72 E-value=4.5e-18 Score=149.03 Aligned_cols=107 Identities=25% Similarity=0.448 Sum_probs=93.0
Q ss_pred eeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCccC-----------CeeeeeecCCCCCCeEecEEEEE-eeC--CCCC
Q 009307 259 VGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKL-----------PSKKTTVKHKNLNPEWNEEYNFT-VRD--PESQ 324 (538)
Q Consensus 259 ~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~-----------~~~~T~v~~~t~nP~w~e~f~f~-v~~--~~~~ 324 (538)
.|.|.|+|++|+||+.+|..|.+||||++++.+... ..++|+++++++||+|||+|.|. +.. ....
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~ 96 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKK 96 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTC
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCC
Confidence 589999999999999999889999999999987531 24689999999999999999997 532 2367
Q ss_pred EEEEEEEeccCCCCCcccEEEEEeCccCCCCCCeEEEEecc
Q 009307 325 AVELAVYDWEQVGKHDKMGMNVVPLKELTPEEPSVKTLDLL 365 (538)
Q Consensus 325 ~L~i~v~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~ 365 (538)
.|.|+|||+|..++|++||++.+++.++..+.....|++|.
T Consensus 97 ~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~ 137 (142)
T 1rh8_A 97 TLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLK 137 (142)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECB
T ss_pred EEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECC
Confidence 99999999999999999999999999998766677888874
No 44
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.72 E-value=1.5e-17 Score=144.66 Aligned_cols=108 Identities=33% Similarity=0.554 Sum_probs=93.5
Q ss_pred CeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCc--cCCeeeeeecCCCCCCeEecEEEEEeeCCC-CCEEEEEEEecc
Q 009307 258 PVGILHVKVVKAMNLKKKDLLGASDPYVKLKITED--KLPSKKTTVKHKNLNPEWNEEYNFTVRDPE-SQAVELAVYDWE 334 (538)
Q Consensus 258 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~--~~~~~~T~v~~~t~nP~w~e~f~f~v~~~~-~~~L~i~v~d~~ 334 (538)
..|.|.|+|++|++|+..+..|.+||||++++.+. ....++|++++++.||.|||+|.|.+.... ...|.|+|||++
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d 93 (137)
T 3rdl_A 14 TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWD 93 (137)
T ss_dssp ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECC
Confidence 45899999999999999998899999999999543 234579999999999999999999986532 458999999999
Q ss_pred CCCCCcccEEEEEeCccCCCCCCeEEEEeccc
Q 009307 335 QVGKHDKMGMNVVPLKELTPEEPSVKTLDLLK 366 (538)
Q Consensus 335 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~ 366 (538)
..++|++||++.++++++..+. ...|++|..
T Consensus 94 ~~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~ 124 (137)
T 3rdl_A 94 RTTRNDFMGSLSFGVSELMKMP-ASGWYKLLN 124 (137)
T ss_dssp SSSCCEEEEEEEEEHHHHHHSC-EEEEEECBC
T ss_pred CCCCCceEEEEEEeHHHhccCc-cCceEECcC
Confidence 9999999999999999997665 778888753
No 45
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=4.2e-17 Score=142.61 Aligned_cols=121 Identities=21% Similarity=0.290 Sum_probs=101.9
Q ss_pred CccccEEEEEEEEEeccCCCCCCccccccccccCCCCCCCCceEEEEEEEeeecCCCC---CCCCcEEEEEEC---CeEE
Q 009307 376 EKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILFR---GEER 449 (538)
Q Consensus 376 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~---~~~dpyv~v~~~---~~~~ 449 (538)
....|+|.+++.|.+ ..+.|+|+|++|++|+.. +.+||||++++. ...+
T Consensus 9 ~~~~G~l~~~l~y~~-------------------------~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~ 63 (141)
T 2d8k_A 9 RENLGRIQFSVGYNF-------------------------QESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKL 63 (141)
T ss_dssp CCCCCEEEEEEEECS-------------------------SSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEE
T ss_pred CceeeEEEEEEEEeC-------------------------CCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccE
Confidence 456899999999985 367899999999999864 578999999995 3567
Q ss_pred EeeeecCCCCCcccceEEEEecCCC--CCCeEEEEEEEcccCccCCCCCceeEEEEEechhhcccceeceEEEeCCCC
Q 009307 450 KTKHVKKNRDPRWEEEFQFMLEEPP--TNDRLHVEVCSVSSRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDSK 525 (538)
Q Consensus 450 kT~v~~~t~nP~w~e~f~f~v~~~~--~~~~l~v~V~d~~~~~g~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~ 525 (538)
+|++++++.||+|||.|.|.+.... ....|.|+|||++. ++++++||++.++|.++..+.....||+|....
T Consensus 64 kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~----~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 137 (141)
T 2d8k_A 64 ETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDR----FSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPSG 137 (141)
T ss_dssp ECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECCS----SSSCEEEEEEEEETTTSCTTSCEEEEECCEECC
T ss_pred eCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECCC----CCCCcEEEEEEEEhhhhcCCCCccEEEECcCCC
Confidence 9999999999999999999853211 23589999999986 578999999999999998877778999997654
No 46
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.72 E-value=1.5e-17 Score=150.42 Aligned_cols=108 Identities=25% Similarity=0.422 Sum_probs=94.3
Q ss_pred CeeEEEEEEEeecCCccCCC-CCCCCcEEEEEEcCcc--CCeeeeeecCCCCCCeEecEEEEEeeCCCCCEEEEEEE-ec
Q 009307 258 PVGILHVKVVKAMNLKKKDL-LGASDPYVKLKITEDK--LPSKKTTVKHKNLNPEWNEEYNFTVRDPESQAVELAVY-DW 333 (538)
Q Consensus 258 ~~g~L~V~v~~a~~L~~~d~-~g~~dpyv~v~~~~~~--~~~~~T~v~~~t~nP~w~e~f~f~v~~~~~~~L~i~v~-d~ 333 (538)
..|.|.|+|++|+||+.+|. .|.+||||++++.+.. ...++|+++++++||+|||+|.|.+.. ....|.|+|| |+
T Consensus 28 ~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~-~~~~L~~~V~~d~ 106 (171)
T 2q3x_A 28 KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESP-QGKVLQVIVWGDY 106 (171)
T ss_dssp ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCC-TTEEEEEEEEEEC
T ss_pred CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecC-CCCEEEEEEEEcC
Confidence 47899999999999999985 6999999999997542 235799999999999999999999854 4689999999 99
Q ss_pred cCCCCCcccEEEEEeCccCCCCCCeEEEEeccc
Q 009307 334 EQVGKHDKMGMNVVPLKELTPEEPSVKTLDLLK 366 (538)
Q Consensus 334 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~ 366 (538)
|.+++|++||++.++|.++..+.....|++|..
T Consensus 107 d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~ 139 (171)
T 2q3x_A 107 GRMDHKCFMGVAQILLEELDLSSMVIGWYKLFP 139 (171)
T ss_dssp STTCSSEEEEEEEECGGGSCTTSCEEEEEECBC
T ss_pred CCCCCCCEEEEEEEEHHHcccCCCcceeEECCC
Confidence 999999999999999999998878888998854
No 47
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.72 E-value=7.7e-17 Score=146.52 Aligned_cols=118 Identities=21% Similarity=0.392 Sum_probs=95.3
Q ss_pred CCceEEEEEEEeeecCCCC---CCCCcEEEEEECC------eEEEeeeecCCCCCcccceEEEEecCCCCCCeEEEEEEE
Q 009307 415 AGGGLLVVIVHEAQDVEGK---HHTNPYARILFRG------EERKTKHVKKNRDPRWEEEFQFMLEEPPTNDRLHVEVCS 485 (538)
Q Consensus 415 ~~~g~L~v~v~~a~~L~~~---~~~dpyv~v~~~~------~~~kT~v~~~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d 485 (538)
...|.|+|+|++|++|+.. +.+||||++++++ ..++|++++++.||.|||.|.|.+.. ....|.|+|||
T Consensus 5 ~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~--~~~~L~~~V~d 82 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLP--QRHRILFEVFD 82 (176)
T ss_dssp TTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECT--TTCEEEEEEEE
T ss_pred CCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcC--CCCEEEEEEEE
Confidence 3689999999999999763 5799999999975 56799999999999999999999975 34689999999
Q ss_pred cccCccCCCCCceeEEEEEechhhccccee-c-----eEEEeCCC-----CCcEEEEEEEEEeC
Q 009307 486 VSSRIGLLHPKETLGYIDINLSDVVSNKRI-N-----EKYHLIDS-----KNGRIQIELQWRTA 538 (538)
Q Consensus 486 ~~~~~g~~~~d~~lG~~~i~l~~l~~~~~~-~-----~~~~L~~~-----~~G~I~l~~~w~p~ 538 (538)
++. ++++++||++.++|.++...... . +||+|... ..|+|+|++.|.|+
T Consensus 83 ~d~----~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 83 ENR----LTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp CC--------CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC-
T ss_pred CCC----CCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEeC
Confidence 985 67899999999999999876432 2 79999753 26999999999884
No 48
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.72 E-value=1.6e-17 Score=145.20 Aligned_cols=111 Identities=19% Similarity=0.364 Sum_probs=93.2
Q ss_pred CCCCeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCcc--CCeeeeeecCCCCCCeEecEEEEEeeC---CCCCEEEEE
Q 009307 255 YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDK--LPSKKTTVKHKNLNPEWNEEYNFTVRD---PESQAVELA 329 (538)
Q Consensus 255 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~--~~~~~T~v~~~t~nP~w~e~f~f~v~~---~~~~~L~i~ 329 (538)
+....+.|.|+|++|++|+.++..|.+||||++++.+.. ...++|++++++.||+|||+|.|.+.. .....|.|+
T Consensus 16 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~ 95 (141)
T 1v27_A 16 FDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEIT 95 (141)
T ss_dssp EETTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEE
T ss_pred EeCCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEE
Confidence 344568999999999999999988999999999985422 345699999999999999999999532 235799999
Q ss_pred EEeccCCCC--CcccEEEEEeCccCCCCCCeEEEEeccc
Q 009307 330 VYDWEQVGK--HDKMGMNVVPLKELTPEEPSVKTLDLLK 366 (538)
Q Consensus 330 v~d~~~~~~--d~~lG~~~i~l~~l~~~~~~~~~~~l~~ 366 (538)
|||++..++ |++||++.+++.++.... ...|++|..
T Consensus 96 V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~ 133 (141)
T 1v27_A 96 LWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQT 133 (141)
T ss_dssp EEEBCSSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBC
T ss_pred EEECCCCcCCCCceEEEEEEEccccCCCC-CCceEECcc
Confidence 999999887 999999999999987654 778888754
No 49
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.71 E-value=4.7e-17 Score=139.99 Aligned_cols=115 Identities=27% Similarity=0.475 Sum_probs=93.8
Q ss_pred cccEEEEEEEEEeccCCCCCCccccccccccCCCCCCCCceEEEEEEEeeecCCCC---CCCCcEEEEEE-----CCeEE
Q 009307 378 SRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILF-----RGEER 449 (538)
Q Consensus 378 ~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~---~~~dpyv~v~~-----~~~~~ 449 (538)
..|+|.+++.|.+ ..+.|.|+|++|++|+.. +.+||||++++ +...+
T Consensus 3 ~~G~l~~~l~y~~-------------------------~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~ 57 (129)
T 2bwq_A 3 LSGQLSIKLWFDK-------------------------VGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKR 57 (129)
T ss_dssp CCCEEEEEEEEET-------------------------TTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEE
T ss_pred eeEEEEEEEEEcc-------------------------CCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcce
Confidence 4799999999985 368999999999999864 46899999999 34678
Q ss_pred EeeeecCCCCCcccceEEEEecCCC--CCCeEEEEEEEcccCccCCCC--CceeEEEEEechhhcccceeceEEEeC
Q 009307 450 KTKHVKKNRDPRWEEEFQFMLEEPP--TNDRLHVEVCSVSSRIGLLHP--KETLGYIDINLSDVVSNKRINEKYHLI 522 (538)
Q Consensus 450 kT~v~~~t~nP~w~e~f~f~v~~~~--~~~~l~v~V~d~~~~~g~~~~--d~~lG~~~i~l~~l~~~~~~~~~~~L~ 522 (538)
+|++++++.||+|||.|.|.+.... ....|.++|||++. +++ +++||++.++|.++.... ..+||+|.
T Consensus 58 kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d~d~----~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~Lq 129 (129)
T 2bwq_A 58 RTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQAR----VREEESEFLGEILIELETALLDD-EPHWYKLQ 129 (129)
T ss_dssp ECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEEC-----------CEEEEEEEEEGGGCCCSS-CEEEEECC
T ss_pred ecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEECCc----CcCcCCceeEEEEEEccccCCCc-CCccEECc
Confidence 9999999999999999999963211 23589999999985 455 899999999999987755 68999984
No 50
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.71 E-value=4.5e-17 Score=144.52 Aligned_cols=110 Identities=21% Similarity=0.361 Sum_probs=93.6
Q ss_pred CCCCeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCc--cCCeeeeeecCCCCCCeEecEEEEEee--CCCCCEEEEEE
Q 009307 255 YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITED--KLPSKKTTVKHKNLNPEWNEEYNFTVR--DPESQAVELAV 330 (538)
Q Consensus 255 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~--~~~~~~T~v~~~t~nP~w~e~f~f~v~--~~~~~~L~i~v 330 (538)
+....|.|.|+|++|+||+..| .|.+||||++++.+. ....++|++++++.||+|||+|.|.+. +. ...|.|+|
T Consensus 22 y~~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~-~~~L~i~V 99 (153)
T 3fbk_A 22 IDAQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDD-QKRLLVTV 99 (153)
T ss_dssp EEESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGT-TSEEEEEE
T ss_pred EECCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHh-CCEEEEEE
Confidence 4557899999999999999998 699999999999643 234579999999999999999999984 33 35699999
Q ss_pred EeccCCCC-CcccEEEEEeCccCCC-CCCeEEEEeccc
Q 009307 331 YDWEQVGK-HDKMGMNVVPLKELTP-EEPSVKTLDLLK 366 (538)
Q Consensus 331 ~d~~~~~~-d~~lG~~~i~l~~l~~-~~~~~~~~~l~~ 366 (538)
||++..++ |++||++.+++.++.. +.....|++|..
T Consensus 100 ~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~ 137 (153)
T 3fbk_A 100 WNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLG 137 (153)
T ss_dssp EECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBC
T ss_pred EeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCC
Confidence 99998877 9999999999999985 667788988854
No 51
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.71 E-value=6.5e-17 Score=141.77 Aligned_cols=119 Identities=18% Similarity=0.301 Sum_probs=102.0
Q ss_pred CccccEEEEEEEEEeccCCCCCCccccccccccCCCCCCCCceEEEEEEEeeecCCCC---CCCCcEEEEEE---CCeEE
Q 009307 376 EKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILF---RGEER 449 (538)
Q Consensus 376 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~---~~~dpyv~v~~---~~~~~ 449 (538)
....|+|.+++.|.+ ..+.|.|+|++|++|+.. +.+||||++++ +.+.+
T Consensus 17 ~~~~G~l~~~l~y~~-------------------------~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~ 71 (143)
T 3f04_A 17 VEKLGKLQYSLDYDF-------------------------QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKF 71 (143)
T ss_dssp CCCCCEEEEEEEEET-------------------------TTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCE
T ss_pred ccCeEEEEEEEEEeC-------------------------CCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccE
Confidence 346899999999985 378999999999999874 57999999999 44578
Q ss_pred EeeeecCCCCCcccceEEEEecCCC-CCCeEEEEEEEcccCccCCCCCceeEEEEEechhhcccceeceEEEeCC
Q 009307 450 KTKHVKKNRDPRWEEEFQFMLEEPP-TNDRLHVEVCSVSSRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLID 523 (538)
Q Consensus 450 kT~v~~~t~nP~w~e~f~f~v~~~~-~~~~l~v~V~d~~~~~g~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 523 (538)
+|++++++.||.|||.|.|.+.... ....|.|+|||++. ++++++||++.++|.++..+....+||+|..
T Consensus 72 kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~----~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 72 ETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR----FSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp ECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS----SSCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred ECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCCC----CCCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 9999999999999999999986421 23589999999986 6789999999999999988777889999964
No 52
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.71 E-value=4.1e-17 Score=143.77 Aligned_cols=121 Identities=24% Similarity=0.282 Sum_probs=100.8
Q ss_pred CCccccEEEEEEEEEeccCCCCCCccccccccccCCCCCCCCceEEEEEEEeeecCCCC----------CCCCcEEEEEE
Q 009307 375 NEKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK----------HHTNPYARILF 444 (538)
Q Consensus 375 ~~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~----------~~~dpyv~v~~ 444 (538)
.....|+|.+++.|.| ..+.|.|+|++|++|+.. +.+||||++++
T Consensus 8 ~~~~~G~l~~~l~y~~-------------------------~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l 62 (147)
T 2enp_A 8 SKYQLGMLHFSTQYDL-------------------------LHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICL 62 (147)
T ss_dssp SCCCCCEEEEEEEEET-------------------------TTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEE
T ss_pred CCCcceEEEEEEEEcC-------------------------CCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEE
Confidence 3567899999999985 378999999999999863 36899999999
Q ss_pred CC---eEEEeeeecCCCCCcccceEEEEecCCC-CCCeEEEEEEEcccCccCCCCCceeEEEEEechhhcccceeceEEE
Q 009307 445 RG---EERKTKHVKKNRDPRWEEEFQFMLEEPP-TNDRLHVEVCSVSSRIGLLHPKETLGYIDINLSDVVSNKRINEKYH 520 (538)
Q Consensus 445 ~~---~~~kT~v~~~t~nP~w~e~f~f~v~~~~-~~~~l~v~V~d~~~~~g~~~~d~~lG~~~i~l~~l~~~~~~~~~~~ 520 (538)
.. ..++|++++++.||+|||.|.|.+.... ....|.|+|||++. ++++++||++.++|.++........|+.
T Consensus 63 ~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~----~~~~~~iG~~~i~l~~l~~~~~~~~w~~ 138 (147)
T 2enp_A 63 LPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLTVVDFDK----FSRHCVIGKVSVPLCEVDLVKGGHWWKA 138 (147)
T ss_dssp ETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEEEEECCST----TCCSCCCEEEEEETTTSCTTTCCCEEEC
T ss_pred EeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEEEEEEECCC----CcCCcEEEEEEEechhcCCCCCccEEEE
Confidence 63 4679999999999999999999876421 12489999999985 6788999999999999977666677888
Q ss_pred eCCC
Q 009307 521 LIDS 524 (538)
Q Consensus 521 L~~~ 524 (538)
|...
T Consensus 139 L~~~ 142 (147)
T 2enp_A 139 LIPS 142 (147)
T ss_dssp CBCC
T ss_pred eecC
Confidence 8754
No 53
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.70 E-value=1.5e-16 Score=137.71 Aligned_cols=106 Identities=26% Similarity=0.413 Sum_probs=88.7
Q ss_pred ceEEEEEEEeeecCCC--CCCCCcEEEEEE-----CCeEEEeeeecCCCCCcccceEEEE-ecCCC-CCCeEEEEEEEcc
Q 009307 417 GGLLVVIVHEAQDVEG--KHHTNPYARILF-----RGEERKTKHVKKNRDPRWEEEFQFM-LEEPP-TNDRLHVEVCSVS 487 (538)
Q Consensus 417 ~g~L~v~v~~a~~L~~--~~~~dpyv~v~~-----~~~~~kT~v~~~t~nP~w~e~f~f~-v~~~~-~~~~l~v~V~d~~ 487 (538)
.+.|.|+|++|++|+. .+.+||||++++ ....++|++++++.||+|||.|.|. +.... ....|.|+|||++
T Consensus 19 ~~~L~V~V~~a~~L~~~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d~d 98 (134)
T 2b3r_A 19 NGTLFIMVMHIKDLVTEDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLSAE 98 (134)
T ss_dssp TTEEEEEEEEEECCCCTTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEECC
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEECC
Confidence 6789999999999986 357899999999 3456799999999999999999999 65321 2358999999998
Q ss_pred cCccCCCCCceeEEEEEechhhcccceeceEEEeCCCCC
Q 009307 488 SRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDSKN 526 (538)
Q Consensus 488 ~~~g~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~ 526 (538)
. ++++++||++.++|+++..+....+||+|.+.+.
T Consensus 99 ~----~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~~ 133 (134)
T 2b3r_A 99 S----LRENFFLGGITLPLKDFNLSKETVKWYQLTAATY 133 (134)
T ss_dssp S----SSCCEEEEEEEEEGGGSCTTSCEEEEEECBC---
T ss_pred C----CCCCcEEEEEEEEhhhccCCCCcceeEECCCccC
Confidence 5 6788999999999999988777889999987544
No 54
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.70 E-value=9.3e-17 Score=143.46 Aligned_cols=98 Identities=39% Similarity=0.637 Sum_probs=85.3
Q ss_pred CCCCeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCc--cCCeeeeeecCCCCCCeEecEEEEEeeCCC--CCEEEEEE
Q 009307 255 YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITED--KLPSKKTTVKHKNLNPEWNEEYNFTVRDPE--SQAVELAV 330 (538)
Q Consensus 255 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~--~~~~~~T~v~~~t~nP~w~e~f~f~v~~~~--~~~L~i~v 330 (538)
+....|.|.|+|++|+||+..|..|.+||||++++.+. ....++|+++++++||+|||+|.|.+.... ...|.|+|
T Consensus 20 y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V 99 (159)
T 1tjx_A 20 YVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTV 99 (159)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEE
T ss_pred EcCCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEE
Confidence 44567999999999999999998899999999999743 223579999999999999999999986432 46899999
Q ss_pred EeccCCCCCcccEEEEEeCccC
Q 009307 331 YDWEQVGKHDKMGMNVVPLKEL 352 (538)
Q Consensus 331 ~d~~~~~~d~~lG~~~i~l~~l 352 (538)
||++.+++|++||++.+++..+
T Consensus 100 ~d~d~~~~~~~iG~~~i~l~~~ 121 (159)
T 1tjx_A 100 LDYDKIGKNDAIGKVFVGYNST 121 (159)
T ss_dssp EECCSSSCCEEEEEEEEETTCC
T ss_pred EECCCCCCCceEEEEEECCCCC
Confidence 9999999999999999999864
No 55
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.70 E-value=1.5e-16 Score=136.86 Aligned_cols=88 Identities=20% Similarity=0.336 Sum_probs=74.5
Q ss_pred CeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCccCCeeeeeecC-CCCCCeEecEEEEEeeCCCCCEEEEEEEeccCC
Q 009307 258 PVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLPSKKTTVKH-KNLNPEWNEEYNFTVRDPESQAVELAVYDWEQV 336 (538)
Q Consensus 258 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~T~v~~-~t~nP~w~e~f~f~v~~~~~~~L~i~v~d~~~~ 336 (538)
+.|.|.|+|++|++++. .|.+||||+++ . +. .+|+++. ++.||+|||+|.|.+... ...|.|+|||+| .
T Consensus 3 ~~~~L~V~V~~A~~l~~---~g~~DPYv~v~-~-~~---~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d-~ 72 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGA---QEKFNTYVTLK-V-QN---VKSTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG-L 72 (131)
T ss_dssp CCEEEEEEEEEEECSSC---GGGCEEEEEEE-E-TT---EEEECCCEESSSCEEEEEEEEEECCC-SSEEEEEEEECC-S
T ss_pred cceEEEEEEEEeECCCC---CCCcCeEEEEE-e-cC---EEEeEecCCCCCceECCEEEEEEeCC-CCeEEEEEEECC-C
Confidence 57999999999998852 57899999999 2 22 3555554 799999999999999865 568999999999 8
Q ss_pred CCCcccEEEEEeCccCCCC
Q 009307 337 GKHDKMGMNVVPLKELTPE 355 (538)
Q Consensus 337 ~~d~~lG~~~i~l~~l~~~ 355 (538)
++|++||++.++|+++...
T Consensus 73 ~~dd~iG~~~i~l~~l~~~ 91 (131)
T 2cjt_A 73 IWDTMVGTVWIPLRTIRQS 91 (131)
T ss_dssp SCEEEEEEEEEEGGGSCBC
T ss_pred CCCCeEEEEEEEHHHhhhc
Confidence 8999999999999998754
No 56
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.70 E-value=3.9e-17 Score=144.85 Aligned_cols=118 Identities=17% Similarity=0.317 Sum_probs=98.7
Q ss_pred CccccEEEEEEEEEeccCCCCCCccccccccccCCCCCCCCceEEEEEEEeeecCCCC---CCCCcEEEEEECC---e--
Q 009307 376 EKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILFRG---E-- 447 (538)
Q Consensus 376 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~---~~~dpyv~v~~~~---~-- 447 (538)
....|+|++++.|.+ ..+.|+|+|++|+||+.+ +.+||||++++.. .
T Consensus 26 ~~~~G~l~~sl~y~~-------------------------~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~ 80 (155)
T 2z0u_A 26 AVGATRIQIALKYDE-------------------------KNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTT 80 (155)
T ss_dssp --CCEEEEEEEEEET-------------------------TTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHH
T ss_pred cCCcEEEEEEEEEcC-------------------------CCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCc
Confidence 356799999999985 368999999999999864 5799999999965 2
Q ss_pred -EEEeeeecCCCCCcccceEEEEecCCC-CCCeEEEEEEEcccCccCCCCCceeEEEEEechhhcc-cceeceEEEeC
Q 009307 448 -ERKTKHVKKNRDPRWEEEFQFMLEEPP-TNDRLHVEVCSVSSRIGLLHPKETLGYIDINLSDVVS-NKRINEKYHLI 522 (538)
Q Consensus 448 -~~kT~v~~~t~nP~w~e~f~f~v~~~~-~~~~l~v~V~d~~~~~g~~~~d~~lG~~~i~l~~l~~-~~~~~~~~~L~ 522 (538)
++||++++++.||+|||.|.|.+.... ....|.++|||++. ++++++||++.++|+++.. .....+||+|.
T Consensus 81 ~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d~d~----~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 81 CLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCTTDR----SHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp HEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEEECT----TSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred cceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEECCC----CCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 679999999999999999999986421 13479999999986 6789999999999999964 45678999985
No 57
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.69 E-value=2.7e-17 Score=144.09 Aligned_cols=119 Identities=19% Similarity=0.382 Sum_probs=99.7
Q ss_pred CccccEEEEEEEEEeccCCCCCCccccccccccCCCCCCCCceEEEEEEEeeecCCCC---CCCCcEEEEEECCe-----
Q 009307 376 EKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILFRGE----- 447 (538)
Q Consensus 376 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~---~~~dpyv~v~~~~~----- 447 (538)
....|+|.+++.|. .|.|.|+|++|++|+.. +.+||||++++.+.
T Consensus 3 ~~~~G~i~~~l~y~---------------------------~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~ 55 (142)
T 1rh8_A 3 HPITGEIQLQINYD---------------------------LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVM 55 (142)
T ss_dssp CCCCCEEEEEEEEE---------------------------TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCE
T ss_pred CCcceEEEEEEEEc---------------------------CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCccc
Confidence 45689999999996 46899999999999864 57899999999763
Q ss_pred ---------EEEeeeecCCCCCcccceEEEE-ecCCC-CCCeEEEEEEEcccCccCCCCCceeEEEEEechhhcccceec
Q 009307 448 ---------ERKTKHVKKNRDPRWEEEFQFM-LEEPP-TNDRLHVEVCSVSSRIGLLHPKETLGYIDINLSDVVSNKRIN 516 (538)
Q Consensus 448 ---------~~kT~v~~~t~nP~w~e~f~f~-v~~~~-~~~~l~v~V~d~~~~~g~~~~d~~lG~~~i~l~~l~~~~~~~ 516 (538)
.++|++++++.||+|||.|.|. +.... ....|.++|||++. ++++++||++.++|+++.......
T Consensus 56 ~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~~l~i~V~d~d~----~~~~~~lG~~~i~l~~l~~~~~~~ 131 (142)
T 1rh8_A 56 VVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKTLEVTVWDYDR----FSSNDFLGEVLIDLSSTSHLDNTP 131 (142)
T ss_dssp ECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTCEEEEEEEEECS----SSCEEEEEEEEEETTSCGGGTTCC
T ss_pred ccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCCEEEEEEEECCC----CCCCceEEEEEEeccccccCCCCC
Confidence 3689999999999999999997 43211 24589999999986 678999999999999998766778
Q ss_pred eEEEeCCCC
Q 009307 517 EKYHLIDSK 525 (538)
Q Consensus 517 ~~~~L~~~~ 525 (538)
+||+|.+..
T Consensus 132 ~W~~L~~~~ 140 (142)
T 1rh8_A 132 RWYPLKEQT 140 (142)
T ss_dssp EEEECBCCC
T ss_pred eEEECCccC
Confidence 999998653
No 58
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.69 E-value=7.7e-17 Score=140.34 Aligned_cols=99 Identities=31% Similarity=0.520 Sum_probs=85.8
Q ss_pred CCCCeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCcc--CCeeeeeecCCCCCCeEecEEEEEeeCCC--CCEEEEEE
Q 009307 255 YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDK--LPSKKTTVKHKNLNPEWNEEYNFTVRDPE--SQAVELAV 330 (538)
Q Consensus 255 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~--~~~~~T~v~~~t~nP~w~e~f~f~v~~~~--~~~L~i~v 330 (538)
+....|.|.|+|++|++|+..|..|.+||||++++.+.. ...++|++++++.||.|||+|.|.+.... ...|.|+|
T Consensus 11 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V 90 (138)
T 3n5a_A 11 YNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITV 90 (138)
T ss_dssp EETTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEE
T ss_pred EcCCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEE
Confidence 344679999999999999999988999999999997532 23568999999999999999999986542 36899999
Q ss_pred EeccCCCCCcccEEEEEeCccCC
Q 009307 331 YDWEQVGKHDKMGMNVVPLKELT 353 (538)
Q Consensus 331 ~d~~~~~~d~~lG~~~i~l~~l~ 353 (538)
||++..++|++||++.+++.++.
T Consensus 91 ~d~~~~~~~~~lG~~~i~l~~~~ 113 (138)
T 3n5a_A 91 MDKDKLSRNDVIGKIYLSWKSGP 113 (138)
T ss_dssp EECCSSSCCEEEEEEEESSSSCH
T ss_pred EECCCCCCCcEEEEEEEccccCC
Confidence 99999999999999999999754
No 59
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.69 E-value=2e-16 Score=142.30 Aligned_cols=99 Identities=29% Similarity=0.525 Sum_probs=86.7
Q ss_pred CCCCeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCcc--CCeeeeeecCCCCCCeEecEEEEEeeCC--CCCEEEEEE
Q 009307 255 YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDK--LPSKKTTVKHKNLNPEWNEEYNFTVRDP--ESQAVELAV 330 (538)
Q Consensus 255 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~--~~~~~T~v~~~t~nP~w~e~f~f~v~~~--~~~~L~i~v 330 (538)
+....+.|.|+|++|+||+.+|..|.+||||++++.+.. ...++|+++++++||+|||+|.|.+... ....|.|+|
T Consensus 32 y~~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V 111 (166)
T 2cm5_A 32 YSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISV 111 (166)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEE
T ss_pred EECCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEE
Confidence 445689999999999999999988999999999998632 3457999999999999999999998643 256999999
Q ss_pred EeccCCCCCcccEEEEEeCccCC
Q 009307 331 YDWEQVGKHDKMGMNVVPLKELT 353 (538)
Q Consensus 331 ~d~~~~~~d~~lG~~~i~l~~l~ 353 (538)
||++.+++|++||++.+++.++.
T Consensus 112 ~d~d~~~~~~~iG~~~i~l~~~~ 134 (166)
T 2cm5_A 112 WDYDIGKSNDYIGGCQLGISAKG 134 (166)
T ss_dssp EECCSSSCCEEEEEEEEETTCCH
T ss_pred EECCCCCCCcEEEeEEEecccCC
Confidence 99999999999999999999863
No 60
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.68 E-value=5.5e-16 Score=133.83 Aligned_cols=114 Identities=21% Similarity=0.383 Sum_probs=95.1
Q ss_pred CceEEEEEEEeeecCCCC---CCCCcEEEEEECC--eEEEeeeecCCCCCcccceEEEEecCCCCCCeEEEEEEEcccCc
Q 009307 416 GGGLLVVIVHEAQDVEGK---HHTNPYARILFRG--EERKTKHVKKNRDPRWEEEFQFMLEEPPTNDRLHVEVCSVSSRI 490 (538)
Q Consensus 416 ~~g~L~v~v~~a~~L~~~---~~~dpyv~v~~~~--~~~kT~v~~~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d~~~~~ 490 (538)
....|+|+|++|++|+.. +.+||||++++++ +.++|++++++.||+|||.|.|.+... +.|.++|||++.
T Consensus 3 ~~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~---~~l~~~v~d~d~-- 77 (132)
T 3pyc_A 3 EFIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKT---DSITISVWNHKK-- 77 (132)
T ss_dssp SEEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETT---CCEEEEEEEGGG--
T ss_pred CeEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCC---CEEEEEEEECCC--
Confidence 356899999999999764 5789999999975 678999999999999999999999764 359999999985
Q ss_pred cCCCC---CceeEEEEEechhhcc-cceeceEEEeCCC-------CCcEEEEEEEEE
Q 009307 491 GLLHP---KETLGYIDINLSDVVS-NKRINEKYHLIDS-------KNGRIQIELQWR 536 (538)
Q Consensus 491 g~~~~---d~~lG~~~i~l~~l~~-~~~~~~~~~L~~~-------~~G~I~l~~~w~ 536 (538)
+++ |++||++.++++++.. .....+|++|... ..|+|++++++|
T Consensus 78 --~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~r 132 (132)
T 3pyc_A 78 --IHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQTR 132 (132)
T ss_dssp --TTSSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEEC
T ss_pred --CCCCCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEcC
Confidence 444 7999999999999844 3344688999654 179999999875
No 61
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.68 E-value=9.4e-17 Score=142.46 Aligned_cols=97 Identities=33% Similarity=0.468 Sum_probs=79.4
Q ss_pred CCCCeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCc--cCCeeeeeecCCCCCCeEecEEEEEeeCCC--CCEEEEEE
Q 009307 255 YRRPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITED--KLPSKKTTVKHKNLNPEWNEEYNFTVRDPE--SQAVELAV 330 (538)
Q Consensus 255 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~--~~~~~~T~v~~~t~nP~w~e~f~f~v~~~~--~~~L~i~v 330 (538)
+....+.|.|+|++|+||+.++..|.+||||++++.+. ....++|+++++++||+|||+|.|.+.... ...|.|+|
T Consensus 25 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V 104 (153)
T 1w15_A 25 YQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLV 104 (153)
T ss_dssp EETTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEE
T ss_pred EcCCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEE
Confidence 44467999999999999999998899999999999543 223569999999999999999999987542 46899999
Q ss_pred EeccCCCCCcccEEEEEeCcc
Q 009307 331 YDWEQVGKHDKMGMNVVPLKE 351 (538)
Q Consensus 331 ~d~~~~~~d~~lG~~~i~l~~ 351 (538)
||++.+++|++||++.+++.+
T Consensus 105 ~d~d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 105 LDSERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp EECCTTSCCEEEEEEEESTTC
T ss_pred EeCCCCCCCcEEEEEEECCCC
Confidence 999999999999999999988
No 62
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.68 E-value=9.4e-17 Score=140.58 Aligned_cols=121 Identities=23% Similarity=0.365 Sum_probs=99.9
Q ss_pred CCccccEEEEEEEEEeccCCCCCCccccccccccCCCCCCCCceEEEEEEEeeecCCCC---CCCCcEEEEEECC-----
Q 009307 375 NEKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILFRG----- 446 (538)
Q Consensus 375 ~~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~---~~~dpyv~v~~~~----- 446 (538)
.....|+|.+++.|.+ ..+.|.|+|++|++|+.. + +||||++++..
T Consensus 6 ~~~~~G~l~~~l~y~~-------------------------~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~ 59 (142)
T 2dmg_A 6 SGSPLGQIQLTIRHSS-------------------------QRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRS 59 (142)
T ss_dssp CSCSSCEEEEEEEEET-------------------------TTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSS
T ss_pred CCCCcceEEEEEEEeC-------------------------CCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCC
Confidence 3567899999999985 367999999999999863 5 89999999943
Q ss_pred eEEEeeeecCCCCCcccceEEEEecCCC-CCCeEEEEEEEcccCccCCC--CCceeEEEEEechhhcccceeceEEEeCC
Q 009307 447 EERKTKHVKKNRDPRWEEEFQFMLEEPP-TNDRLHVEVCSVSSRIGLLH--PKETLGYIDINLSDVVSNKRINEKYHLID 523 (538)
Q Consensus 447 ~~~kT~v~~~t~nP~w~e~f~f~v~~~~-~~~~l~v~V~d~~~~~g~~~--~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 523 (538)
..++|++++++.||+|||.|.|.+.... ....|.|+|||++. ++ .+++||++.++|+++.......+||+|.+
T Consensus 60 ~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~----~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~ 135 (142)
T 2dmg_A 60 GRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSGG----FLSKDKGLLGKVLVALASEELAKGWTQWYDLTE 135 (142)
T ss_dssp SCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEECCC----SSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBC
T ss_pred CcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEECCC----ccccCCcEEEEEEEecccccccccccceeeccC
Confidence 4679999999999999999999985321 12489999999985 33 35799999999999887667789999986
Q ss_pred CC
Q 009307 524 SK 525 (538)
Q Consensus 524 ~~ 525 (538)
.+
T Consensus 136 ~~ 137 (142)
T 2dmg_A 136 DS 137 (142)
T ss_dssp SC
T ss_pred CC
Confidence 53
No 63
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.67 E-value=1.1e-16 Score=144.17 Aligned_cols=106 Identities=19% Similarity=0.370 Sum_probs=90.9
Q ss_pred CccccEEEEEEEEEeccCCCCCCccccccccccCCCCCCCCceEEEEEEEeeecCCCC---CCCCcEEEEEECC-----e
Q 009307 376 EKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILFRG-----E 447 (538)
Q Consensus 376 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~---~~~dpyv~v~~~~-----~ 447 (538)
....|+|.+++.|.+ ..+.|.|+|++|++|+.. +.+||||++++.+ .
T Consensus 20 ~~~~G~l~~~l~y~~-------------------------~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~ 74 (166)
T 2cm5_A 20 IEERGKILVSLMYST-------------------------QQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKA 74 (166)
T ss_dssp CCCCCEEEEEEEEET-------------------------TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CC
T ss_pred cCccceEEEEEEEEC-------------------------CCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccc
Confidence 567899999999985 378999999999999864 5789999999975 5
Q ss_pred EEEeeeecCCCCCcccceEEEEecCCCC-CCeEEEEEEEcccCccCCCCCceeEEEEEechhhc
Q 009307 448 ERKTKHVKKNRDPRWEEEFQFMLEEPPT-NDRLHVEVCSVSSRIGLLHPKETLGYIDINLSDVV 510 (538)
Q Consensus 448 ~~kT~v~~~t~nP~w~e~f~f~v~~~~~-~~~l~v~V~d~~~~~g~~~~d~~lG~~~i~l~~l~ 510 (538)
.++|++++++.||+|||.|.|.+..... ...|.|+|||++. ++++++||++.+++.++.
T Consensus 75 ~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~----~~~~~~iG~~~i~l~~~~ 134 (166)
T 2cm5_A 75 KHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDI----GKSNDYIGGCQLGISAKG 134 (166)
T ss_dssp EEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCS----SSCCEEEEEEEEETTCCH
T ss_pred eEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEECCC----CCCCcEEEeEEEecccCC
Confidence 6799999999999999999999864321 3589999999985 678999999999998853
No 64
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.67 E-value=4.9e-16 Score=138.73 Aligned_cols=121 Identities=19% Similarity=0.351 Sum_probs=99.4
Q ss_pred CccccEEEEEEEEEeccCCCCCCccccccccccCCCCCCCCceEEEEEEEeeecCCCC---CCCCcEEEEEECC-----e
Q 009307 376 EKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILFRG-----E 447 (538)
Q Consensus 376 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~---~~~dpyv~v~~~~-----~ 447 (538)
....|+|.+++.|.| ..+.|.|+|++|++|+.. +.+||||++++.+ .
T Consensus 8 ~~~~G~l~~~l~y~~-------------------------~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~ 62 (159)
T 1tjx_A 8 LEKLGDICFSLRYVP-------------------------TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLK 62 (159)
T ss_dssp GGCCCEEEEEEEEET-------------------------TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEE
T ss_pred cCcCCeEEEEEEEcC-------------------------CCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceec
Confidence 457899999999985 378999999999999864 5789999999963 3
Q ss_pred EEEeeeecCCCCCcccceEEEEecCCCC-CCeEEEEEEEcccCccCCCCCceeEEEEEechh----------hcc--cce
Q 009307 448 ERKTKHVKKNRDPRWEEEFQFMLEEPPT-NDRLHVEVCSVSSRIGLLHPKETLGYIDINLSD----------VVS--NKR 514 (538)
Q Consensus 448 ~~kT~v~~~t~nP~w~e~f~f~v~~~~~-~~~l~v~V~d~~~~~g~~~~d~~lG~~~i~l~~----------l~~--~~~ 514 (538)
.++|++++++.||+|||.|.|.+..... ...|.|+|||++. ++++++||++.+++.. +.. +..
T Consensus 63 ~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~----~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~ 138 (159)
T 1tjx_A 63 KKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDK----IGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRP 138 (159)
T ss_dssp EEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCS----SSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCC
T ss_pred eeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEECCC----CCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCe
Confidence 5699999999999999999999864322 3479999999985 6789999999999984 333 246
Q ss_pred eceEEEeCCCC
Q 009307 515 INEKYHLIDSK 525 (538)
Q Consensus 515 ~~~~~~L~~~~ 525 (538)
..+||+|....
T Consensus 139 ~~~W~~L~~~~ 149 (159)
T 1tjx_A 139 IAQWHTLQVEE 149 (159)
T ss_dssp EEEEEECBCHH
T ss_pred eeeEEECcCcc
Confidence 77999997643
No 65
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.67 E-value=9e-16 Score=150.70 Aligned_cols=132 Identities=19% Similarity=0.313 Sum_probs=113.1
Q ss_pred ccccEEEEEEEEEeccCCCCCCccccccccccCCCCCCCCceEEEEEEEeeecCCCC---CCCCcEEEEEECC---eEEE
Q 009307 377 KSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILFRG---EERK 450 (538)
Q Consensus 377 ~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~---~~~dpyv~v~~~~---~~~k 450 (538)
...|+|.+++.|.+ ..+.|.|+|++|++|+.. +.+||||+++++. +.++
T Consensus 3 ~~~G~l~~~l~y~~-------------------------~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~ 57 (284)
T 2r83_A 3 EKLGKLQYSLDYDF-------------------------QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFE 57 (284)
T ss_dssp CCCCEEEEEEEEET-------------------------TTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEE
T ss_pred cceeEEEEEEEEEC-------------------------CCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEe
Confidence 45899999999985 378999999999999863 5799999999963 4679
Q ss_pred eeeecCCCCCcccceEEEEecCCC-CCCeEEEEEEEcccCccCCCCCceeEEEEEechhhcccceeceEEEeCCC-----
Q 009307 451 TKHVKKNRDPRWEEEFQFMLEEPP-TNDRLHVEVCSVSSRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDS----- 524 (538)
Q Consensus 451 T~v~~~t~nP~w~e~f~f~v~~~~-~~~~l~v~V~d~~~~~g~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~----- 524 (538)
|++++++.||.|||.|.|.+.... ....|.++|||++. ++.+++||++.++|.++..+....+||+|...
T Consensus 58 T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~----~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~ 133 (284)
T 2r83_A 58 TKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDR----FSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQ 133 (284)
T ss_dssp CCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECCS----SSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCC
T ss_pred CCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEECCC----CCCCceeEEEEEcchhcccCCcceeEEEeeccccccc
Confidence 999999999999999999986432 23589999999985 67899999999999999887778899999753
Q ss_pred -CCcEEEEEEEEEe
Q 009307 525 -KNGRIQIELQWRT 537 (538)
Q Consensus 525 -~~G~I~l~~~w~p 537 (538)
..|+|.++++|.|
T Consensus 134 ~~~G~i~l~l~~~p 147 (284)
T 2r83_A 134 EKLGDICFSLRYVP 147 (284)
T ss_dssp CCCCEEEEEEEEET
T ss_pred cccccEEEEEEecC
Confidence 3599999999876
No 66
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.67 E-value=1.6e-16 Score=141.00 Aligned_cols=118 Identities=18% Similarity=0.251 Sum_probs=91.9
Q ss_pred CccccEEEEEEEEEeccCCCCCCccccccccccCCCCCCCCceEEEEEEEeeecCCCC---CCCCcEEEEEEC--Ce---
Q 009307 376 EKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILFR--GE--- 447 (538)
Q Consensus 376 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~---~~~dpyv~v~~~--~~--- 447 (538)
....|+|.+++.|.| ..+.|.|+|++|++|+.. +.+||||++++. +.
T Consensus 13 ~~~~G~l~~~l~y~~-------------------------~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~ 67 (153)
T 1w15_A 13 PSGRGELLVSLCYQS-------------------------TTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRIS 67 (153)
T ss_dssp ---CCEEEEEEEEET-------------------------TTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEE
T ss_pred CccccEEEEEEEEcC-------------------------CCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEec
Confidence 457899999999986 368999999999999864 578999999993 33
Q ss_pred EEEeeeecCCCCCcccceEEEEecCCCC-CCeEEEEEEEcccCccCCCCCceeEEEEEechhhcccceeceEEEeCCC
Q 009307 448 ERKTKHVKKNRDPRWEEEFQFMLEEPPT-NDRLHVEVCSVSSRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDS 524 (538)
Q Consensus 448 ~~kT~v~~~t~nP~w~e~f~f~v~~~~~-~~~l~v~V~d~~~~~g~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 524 (538)
+++|++++++.||+|||.|.|.+..... ...|.|+|||++. ++++++||++.+++++ ......+||+|.+.
T Consensus 68 ~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d~----~~~~~~lG~~~i~l~~--~~~~~~~W~~l~~~ 139 (153)
T 1w15_A 68 KKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSER----GSRNEVIGRLVLGATA--EGSGGGHWKEICDF 139 (153)
T ss_dssp EEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEECCT----TSCCEEEEEEEESTTC--CSHHHHHHHHHHHS
T ss_pred eEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeCCC----CCCCcEEEEEEECCCC--CchHHHHHHHHHhC
Confidence 5699999999999999999999876432 2479999999985 6789999999999988 22233455555443
No 67
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.67 E-value=3.1e-16 Score=137.24 Aligned_cols=119 Identities=21% Similarity=0.411 Sum_probs=97.4
Q ss_pred CccccEEEEEEEEEeccCCCCCCccccccccccCCCCCCCCceEEEEEEEeeecCCCC---CCCCcEEEEEECC-----e
Q 009307 376 EKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILFRG-----E 447 (538)
Q Consensus 376 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~---~~~dpyv~v~~~~-----~ 447 (538)
....|+|.+++.|.+ ..+.|.|+|++|++|+.. +.+||||++++.+ .
T Consensus 12 ~~~~G~l~~~l~y~~-------------------------~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~ 66 (142)
T 2chd_A 12 ATTLGALEFSLLYDQ-------------------------DNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSN 66 (142)
T ss_dssp --CCCEEEEEEEEEG-------------------------GGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGG
T ss_pred CCccceEEEEEEEeC-------------------------CCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcc
Confidence 457899999999985 378999999999999864 5789999999975 5
Q ss_pred EEEeeeecCCCCCcccceEEEE-ecCCCC-CCeEEEEEEEcccCccCCCCCceeEEEEEechhhcccceeceEEEeCC
Q 009307 448 ERKTKHVKKNRDPRWEEEFQFM-LEEPPT-NDRLHVEVCSVSSRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLID 523 (538)
Q Consensus 448 ~~kT~v~~~t~nP~w~e~f~f~-v~~~~~-~~~l~v~V~d~~~~~g~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 523 (538)
.++|++++++.||+|||.|.|. +..... ...|.|+|||++. ++++++||++.++|+++..+....-|++|..
T Consensus 67 ~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~----~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 67 KLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDEDK----FGHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp EEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEEECT----TSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred eeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEECCC----CCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 7799999999999999999998 532111 2589999999985 5778999999999999987765555666653
No 68
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.66 E-value=1.1e-15 Score=132.98 Aligned_cols=120 Identities=21% Similarity=0.351 Sum_probs=98.5
Q ss_pred CccccEEEEEEEEEeccCCCCCCccccccccccCCCCCCCCceEEEEEEEeeecCCCC----CCCCcEEEEEECC---eE
Q 009307 376 EKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK----HHTNPYARILFRG---EE 448 (538)
Q Consensus 376 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~----~~~dpyv~v~~~~---~~ 448 (538)
....|+|.+++.|.+ ..+.|.|+|++|++|+.. +.+||||++++.. ..
T Consensus 5 ~~~~G~l~~~l~y~~-------------------------~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~ 59 (138)
T 1ugk_A 5 SSGLGTLFFSLEYNF-------------------------ERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHK 59 (138)
T ss_dssp CCCCCEEEEEEEEEG-------------------------GGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSE
T ss_pred CCccEEEEEEEEEEC-------------------------CCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCce
Confidence 456899999999986 377999999999999863 5689999999963 57
Q ss_pred EEeeeecCCCCCcccceEEEE-ecCCC-CCCeEEEEEEEcccCccCCCCCceeEEEEEechhhcccce-eceEEEeCCC
Q 009307 449 RKTKHVKKNRDPRWEEEFQFM-LEEPP-TNDRLHVEVCSVSSRIGLLHPKETLGYIDINLSDVVSNKR-INEKYHLIDS 524 (538)
Q Consensus 449 ~kT~v~~~t~nP~w~e~f~f~-v~~~~-~~~~l~v~V~d~~~~~g~~~~d~~lG~~~i~l~~l~~~~~-~~~~~~L~~~ 524 (538)
++|++++++.||+|||.|.|. +.... ....|.|+|||++. ++++++||++.++|+++..... ..-|++|...
T Consensus 60 ~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~d~----~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~~ 134 (138)
T 1ugk_A 60 VKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDR----FSRDDIIGEVLIPLSGIELSEGKMLMNREIISG 134 (138)
T ss_dssp EECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEECS----SCCCCCCEEEEEECTTCCCTTCCEEEEEECBSS
T ss_pred EecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEECCC----CCCCcEEEEEEEehhHccCCCCcchhhhhhhcC
Confidence 899999999999999999995 54322 23589999999985 6789999999999999977543 3456777654
No 69
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.66 E-value=4.2e-16 Score=131.94 Aligned_cols=119 Identities=16% Similarity=0.253 Sum_probs=100.4
Q ss_pred eeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCccCCeeeeeecC-CCCCCeEecEEEEEeeCCC--CCEEEEEEEeccC
Q 009307 259 VGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLPSKKTTVKH-KNLNPEWNEEYNFTVRDPE--SQAVELAVYDWEQ 335 (538)
Q Consensus 259 ~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~T~v~~-~t~nP~w~e~f~f~v~~~~--~~~L~i~v~d~~~ 335 (538)
.-.|+|+|.+|.+|+ |++|||+++.+.+.+ ++|++++ ++.||+|||.|.|.+..+. +..|.++|||+++
T Consensus 20 ~msL~V~l~~a~~Lp-----g~~Dp~akv~FRg~k---~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~ 91 (144)
T 3l9b_A 20 HMALIVHLKTVSELR-----GRADRIAKVTFRGQS---FYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSK 91 (144)
T ss_dssp CEEEEEEEEEEESCC-----SCEEEEEEEEETTEE---EECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECT
T ss_pred cEEEEEEEEEecCCC-----CCCCCeEEEEEeccc---eeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECcc
Confidence 346999999999998 578999999997654 5999998 6999999999999998643 6799999999999
Q ss_pred CCCCcccEEEEEeCccCCCCCCeEEEEecccccccCCCCCCccccEEEEEEEEEec
Q 009307 336 VGKHDKMGMNVVPLKELTPEEPSVKTLDLLKNMDLNDGQNEKSRGQLVVEFIYKPF 391 (538)
Q Consensus 336 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~~~p~ 391 (538)
++++++||++.++|+++...+....+..|.. .++....++|.++++|.|.
T Consensus 92 v~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD------~n~~~~~a~I~l~l~Y~pp 141 (144)
T 3l9b_A 92 VFSNKLIGTFRMVLQKVVEENRVEVSDTLID------DNNAIIKTSLSMEVRYQAA 141 (144)
T ss_dssp TSCCEEEEEEEEESHHHHHHSEEEEEEEEEC------TTSCEEEEEEEEEEEEEET
T ss_pred ccCCCEEEEEEEEhHHhccCCeEEEeecccC------CCCCccccEEEEEEEecCC
Confidence 9999999999999999998776666555532 2234566899999999985
No 70
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.66 E-value=5e-16 Score=140.35 Aligned_cols=116 Identities=22% Similarity=0.310 Sum_probs=98.7
Q ss_pred CccccEEEEEEEEEeccCCCCCCccccccccccCCCCCCCCceEEEEEEEeeecCCCC----CCCCcEEEEEECC-----
Q 009307 376 EKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK----HHTNPYARILFRG----- 446 (538)
Q Consensus 376 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~----~~~dpyv~v~~~~----- 446 (538)
....|+|.+.+.|. .+.|.|+|++|++|+.. +.+||||++++.+
T Consensus 15 ~~~~G~l~~~l~y~---------------------------~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~ 67 (171)
T 2q3x_A 15 TPAMGDIQIGMEDK---------------------------KGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACI 67 (171)
T ss_dssp --CCCEEEEEEEEE---------------------------TTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEE
T ss_pred CCCccEEEEEEEEC---------------------------CCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccc
Confidence 44679999999993 56899999999999853 5789999999964
Q ss_pred eEEEeeeecCCCCCcccceEEEEecCCCCCCeEEEEEE-EcccCccCCCCCceeEEEEEechhhcccceeceEEEeCCC
Q 009307 447 EERKTKHVKKNRDPRWEEEFQFMLEEPPTNDRLHVEVC-SVSSRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDS 524 (538)
Q Consensus 447 ~~~kT~v~~~t~nP~w~e~f~f~v~~~~~~~~l~v~V~-d~~~~~g~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 524 (538)
..++|++++++.||+|||.|.|.+.. ....|.|+|| |++. ++++++||++.++|+++..+....+||+|...
T Consensus 68 ~~~kT~v~~~t~nP~wne~f~f~v~~--~~~~L~~~V~~d~d~----~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 68 AKKKTRIARKTLDPLYQQSLVFDESP--QGKVLQVIVWGDYGR----MDHKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp EEEECCCCCSCSSCEEEEEEECSSCC--TTEEEEEEEEEECST----TCSSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred cceeCccCCCCCCCCCCcEEEEEecC--CCCEEEEEEEEcCCC----CCCCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 26699999999999999999999854 3468999999 8875 67889999999999999877778899999764
No 71
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.65 E-value=8.7e-16 Score=138.67 Aligned_cols=115 Identities=20% Similarity=0.351 Sum_probs=97.8
Q ss_pred CceEEEEEEEeeecCC-CC--CCCCcEEEEEECCeEEEeeeecCCCCCcccceEEEEecCCCCCCeEEEEEEEcccCccC
Q 009307 416 GGGLLVVIVHEAQDVE-GK--HHTNPYARILFRGEERKTKHVKKNRDPRWEEEFQFMLEEPPTNDRLHVEVCSVSSRIGL 492 (538)
Q Consensus 416 ~~g~L~v~v~~a~~L~-~~--~~~dpyv~v~~~~~~~kT~v~~~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d~~~~~g~ 492 (538)
..+.|.|+|++|++|+ .. +.+||||+++++++.++|++++++.||+|||.|.|.+.. ...|.|+|||++.
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~~---~~~L~~~V~D~d~---- 106 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVTP---VSKLHFRVWSHQT---- 106 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEECT---TCEEEEEEEECCS----
T ss_pred CceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeCC---CCEEEEEEEECCC----
Confidence 5788999999999998 32 358999999999988899999999999999999999853 5689999999986
Q ss_pred CCCCceeEEEEEechhhcccc-----eeceEEEeCCC-----CCcEEEEEEEEEe
Q 009307 493 LHPKETLGYIDINLSDVVSNK-----RINEKYHLIDS-----KNGRIQIELQWRT 537 (538)
Q Consensus 493 ~~~d~~lG~~~i~l~~l~~~~-----~~~~~~~L~~~-----~~G~I~l~~~w~p 537 (538)
++.|++||++.++|.++.... ....|++|... ..|+|.+.+.+.+
T Consensus 107 ~~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~ 161 (173)
T 2nq3_A 107 LKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQ 161 (173)
T ss_dssp SSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESEE
T ss_pred CCCCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeeee
Confidence 678999999999999997632 23569999754 2699999998765
No 72
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.65 E-value=1e-15 Score=133.16 Aligned_cols=115 Identities=20% Similarity=0.412 Sum_probs=92.8
Q ss_pred ccEEEEEEEEEeccCCCCCCccccccccccCCCCCCCCceEEEEEEEeeecCCCC---CCCCcEEEEEECC-----eEEE
Q 009307 379 RGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILFRG-----EERK 450 (538)
Q Consensus 379 ~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~---~~~dpyv~v~~~~-----~~~k 450 (538)
+|+|.+++.|.+ ..+.|.|+|++|++|+.. +.+||||++++.+ ..++
T Consensus 2 ~G~l~~sl~y~~-------------------------~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~k 56 (138)
T 3n5a_A 2 RGELLLSLCYNP-------------------------SANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKK 56 (138)
T ss_dssp CCEEEEEEEEET-------------------------TTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEE
T ss_pred CcEEEEEEEEcC-------------------------CCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEe
Confidence 699999999985 378999999999999864 5789999999964 3569
Q ss_pred eeeecCCCCCcccceEEEEecCCCC-CCeEEEEEEEcccCccCCCCCceeEEEEEechhhcccceeceEEEeCCC
Q 009307 451 TKHVKKNRDPRWEEEFQFMLEEPPT-NDRLHVEVCSVSSRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDS 524 (538)
Q Consensus 451 T~v~~~t~nP~w~e~f~f~v~~~~~-~~~l~v~V~d~~~~~g~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 524 (538)
|++++++.||.|||.|.|.+..... ...|.++|||++. ++++++||++.++|+++.. ...+|++|.+.
T Consensus 57 T~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d~~~----~~~~~~lG~~~i~l~~~~~--~~~~W~~l~~~ 125 (138)
T 3n5a_A 57 TVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKDK----LSRNDVIGKIYLSWKSGPG--EVKHWKDMIAR 125 (138)
T ss_dssp CCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEECCS----SSCCEEEEEEEESSSSCHH--HHHHHHHHHHS
T ss_pred CccccCCCCCcCcceEEEECChhhcCceEEEEEEEECCC----CCCCcEEEEEEEccccCCh--HHHHHHHHHhC
Confidence 9999999999999999999865321 2479999999986 6789999999999997432 22445555443
No 73
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.64 E-value=5.7e-16 Score=165.02 Aligned_cols=120 Identities=27% Similarity=0.465 Sum_probs=102.9
Q ss_pred CCeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCccCCeeeeeecCCCCCCeEecEEEEEeeCCCCCEEEEEEEeccCC
Q 009307 257 RPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRDPESQAVELAVYDWEQV 336 (538)
Q Consensus 257 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~w~e~f~f~v~~~~~~~L~i~v~d~~~~ 336 (538)
...|.|.|+|++|++|+.+|..|.+||||++++++.. ++|+++++|+||.|||+|.|.+.......|.|+|||+|..
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~---~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~ 460 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQS---YTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQF 460 (510)
T ss_dssp --CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEE---EECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSS
T ss_pred CCCceEEEEeceeecCCCCCCCCCCCeEEEEEECCee---ccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCC
Confidence 4679999999999999999999999999999997654 5999999999999999999999877778899999999999
Q ss_pred CCCcccEEEEEeCccCCCCCC----eEEEEecccccccCCCCCCccccEEEEEEEEE
Q 009307 337 GKHDKMGMNVVPLKELTPEEP----SVKTLDLLKNMDLNDGQNEKSRGQLVVEFIYK 389 (538)
Q Consensus 337 ~~d~~lG~~~i~l~~l~~~~~----~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~~~ 389 (538)
++|++||++.+++.++..+.. ...|+.+. +...|+|++++.+.
T Consensus 461 ~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~----------~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 461 SPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLH----------EVPTGEVWVRFDLQ 507 (510)
T ss_dssp SSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECB----------SSSSCEEEEEEEEE
T ss_pred CCCCceEEEEEEHHHhccccCCCCceeeeecCC----------CCCCceEEEEEEEE
Confidence 999999999999999876432 45666652 34679999888765
No 74
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.62 E-value=3.5e-15 Score=133.63 Aligned_cols=89 Identities=19% Similarity=0.315 Sum_probs=75.4
Q ss_pred CCeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCccCCeeeeeecC-CCCCCeEecEEEEEeeCCCCCEEEEEEEeccC
Q 009307 257 RPVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLPSKKTTVKH-KNLNPEWNEEYNFTVRDPESQAVELAVYDWEQ 335 (538)
Q Consensus 257 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~T~v~~-~t~nP~w~e~f~f~v~~~~~~~L~i~v~d~~~ 335 (538)
.+.+.|+|+|++|++++ ..|.+||||+++ . +. .+|+++. ++.||+|||+|.|.+.+. ...|.|+|||+|
T Consensus 11 g~~~~L~V~V~~A~~l~---~~g~~DPYV~v~-~-~~---~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d- 80 (167)
T 2cjs_A 11 GILSLLCVGVKKAKFDG---AQEKFNTYVTLK-V-QN---VESTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG- 80 (167)
T ss_dssp SCCCEEEEEEEEEECSS---CGGGCEEEEEEE-E-TT---EEEECCCEESSSCEEEEEEEEECCCT-TSEEEEEEEECC-
T ss_pred CceEEEEEEEEEEECCC---CCCCCCeEEEEE-e-cc---eEEEEecCCCCCCCCCCEEEEEeeCC-CCEEEEEEEECC-
Confidence 35789999999999884 258899999999 2 22 3666665 699999999999999865 568999999999
Q ss_pred CCCCcccEEEEEeCccCCCC
Q 009307 336 VGKHDKMGMNVVPLKELTPE 355 (538)
Q Consensus 336 ~~~d~~lG~~~i~l~~l~~~ 355 (538)
.++|++||++.++|+++...
T Consensus 81 ~~~dd~iG~~~i~L~~l~~~ 100 (167)
T 2cjs_A 81 LIWDTMVGTVWIPLRTIRQS 100 (167)
T ss_dssp SSCCEEEEEEEEEGGGSCBC
T ss_pred CCCCceEEEEEEEHHHhccc
Confidence 88999999999999998654
No 75
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.60 E-value=1.2e-14 Score=123.00 Aligned_cols=117 Identities=19% Similarity=0.402 Sum_probs=103.1
Q ss_pred CceEEEEEEEeeecCCCCCCCCcEEEEEECCeEEEeeeec-CCCCCcccceEEEEecCCCC-CCeEEEEEEEcccCccCC
Q 009307 416 GGGLLVVIVHEAQDVEGKHHTNPYARILFRGEERKTKHVK-KNRDPRWEEEFQFMLEEPPT-NDRLHVEVCSVSSRIGLL 493 (538)
Q Consensus 416 ~~g~L~v~v~~a~~L~~~~~~dpyv~v~~~~~~~kT~v~~-~t~nP~w~e~f~f~v~~~~~-~~~l~v~V~d~~~~~g~~ 493 (538)
+...|+|.|.+|.+|++ .+|||+++.+.+.+++|++++ ++.||+|||.|+|++..+.. .+.|.|.|+|+++ +
T Consensus 19 ~~msL~V~l~~a~~Lpg--~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~----v 92 (144)
T 3l9b_A 19 SHMALIVHLKTVSELRG--RADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSK----V 92 (144)
T ss_dssp CCEEEEEEEEEEESCCS--CEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECT----T
T ss_pred CcEEEEEEEEEecCCCC--CCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECcc----c
Confidence 45689999999999996 599999999999999999998 69999999999999987533 3589999999987 7
Q ss_pred CCCceeEEEEEechhhcccceeceEEEeCCCC----CcEEEEEEEEEeC
Q 009307 494 HPKETLGYIDINLSDVVSNKRINEKYHLIDSK----NGRIQIELQWRTA 538 (538)
Q Consensus 494 ~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~----~G~I~l~~~w~p~ 538 (538)
+++.+||++.++|.++...+.+.-+-.|.+.+ .+.|.+++.|.|.
T Consensus 93 ~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~~a~I~l~l~Y~pp 141 (144)
T 3l9b_A 93 FSNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIKTSLSMEVRYQAA 141 (144)
T ss_dssp SCCEEEEEEEEESHHHHHHSEEEEEEEEECTTSCEEEEEEEEEEEEEET
T ss_pred cCCCEEEEEEEEhHHhccCCeEEEeecccCCCCCccccEEEEEEEecCC
Confidence 78999999999999999988777777887754 4999999999984
No 76
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.59 E-value=7.4e-15 Score=144.97 Aligned_cols=133 Identities=21% Similarity=0.375 Sum_probs=108.7
Q ss_pred CccccEEEEEEEEEeccCCCCCCccccccccccCCCCCCCCceEEEEEEEeeecCCCC---CCCCcEEEEEE---CCeEE
Q 009307 376 EKSRGQLVVEFIYKPFKEEDLPKSFEESQTVQKAPENTPAGGGLLVVIVHEAQDVEGK---HHTNPYARILF---RGEER 449 (538)
Q Consensus 376 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~---~~~dpyv~v~~---~~~~~ 449 (538)
.+..|+|.+++.|.+ ..+.|.|+|++|++|+.. +.+||||++++ +.+.+
T Consensus 3 ~~~~G~l~~~l~y~~-------------------------~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~ 57 (296)
T 1dqv_A 3 GAPCGRISFALRYLY-------------------------GSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKF 57 (296)
T ss_dssp CCSSCEEEEEEECCS-------------------------SSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCE
T ss_pred CCeeeEEEEEEEEeC-------------------------CCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeE
Confidence 567899999999974 378999999999999864 57999999999 45678
Q ss_pred EeeeecCCCCCcccceEEEEecCCCC-CCeEEEEEEEcccCccCCCCCceeEEEEEe-chhhcc-cceeceEEEeCCC--
Q 009307 450 KTKHVKKNRDPRWEEEFQFMLEEPPT-NDRLHVEVCSVSSRIGLLHPKETLGYIDIN-LSDVVS-NKRINEKYHLIDS-- 524 (538)
Q Consensus 450 kT~v~~~t~nP~w~e~f~f~v~~~~~-~~~l~v~V~d~~~~~g~~~~d~~lG~~~i~-l~~l~~-~~~~~~~~~L~~~-- 524 (538)
+|++++++.||.|||.|.|.+..... ...|.++|||.+. ++++++||++.++ +.++.. ......|++|...
T Consensus 58 kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~----~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~ 133 (296)
T 1dqv_A 58 QTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFDR----FSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGS 133 (296)
T ss_dssp ECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEECCS----SSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSS
T ss_pred eCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEcCC----CCCCceEEEEEeccccccccCCccceeeeccccccc
Confidence 99999999999999999999864321 3489999999986 6789999999996 555554 2345679999653
Q ss_pred ---CCcEEEEEEEEEe
Q 009307 525 ---KNGRIQIELQWRT 537 (538)
Q Consensus 525 ---~~G~I~l~~~w~p 537 (538)
..|+|.+.+.+.|
T Consensus 134 ~~~~~G~i~vsl~y~~ 149 (296)
T 1dqv_A 134 EKADLGELNFSLCYLP 149 (296)
T ss_dssp CCSCCCEEEEEEEEET
T ss_pred cccccceEEEEEEecc
Confidence 2599999999876
No 77
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.56 E-value=4.1e-15 Score=161.22 Aligned_cols=108 Identities=23% Similarity=0.397 Sum_probs=97.9
Q ss_pred CCeeEEEEEEEeecCCcc---CCCCCCCCcEEEEEEcCccCCeeeeeecCCCCCCeEecEEEEEeeCCCCCEEEEEEEec
Q 009307 257 RPVGILHVKVVKAMNLKK---KDLLGASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRDPESQAVELAVYDW 333 (538)
Q Consensus 257 ~~~g~L~V~v~~a~~L~~---~d~~g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~w~e~f~f~v~~~~~~~L~i~v~d~ 333 (538)
.+.|.|+|+|++|++|+. +|..|++||||++++++....++||+++++++||+|||+|.|.+.......|+|+|||+
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~ 94 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 94 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEEC
T ss_pred CCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEEC
Confidence 578999999999999998 78789999999999997554567999999999999999999999876678999999999
Q ss_pred cCCCCCcccEEEEEeCccCCCCCCeEEEEecc
Q 009307 334 EQVGKHDKMGMNVVPLKELTPEEPSVKTLDLL 365 (538)
Q Consensus 334 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~ 365 (538)
|.++ |++||++.+++.++..+.....|++|.
T Consensus 95 D~~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~ 125 (749)
T 1cjy_A 95 NYVM-DETLGTATFTVSSMKVGEKKEVPFIFN 125 (749)
T ss_dssp CSSS-CEEEEEECCBSTTSCTTCCCCEEEEET
T ss_pred CCCC-CceeEEEEEEHHHcCCCCceEEEEecC
Confidence 9998 999999999999998887778888874
No 78
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.54 E-value=5.1e-14 Score=149.93 Aligned_cols=117 Identities=21% Similarity=0.452 Sum_probs=102.3
Q ss_pred CCceEEEEEEEeeecCCCC---CCCCcEEEEEECCeEEEeeeecCCCCCcccceEEEEecCCCCCCeEEEEEEEcccCcc
Q 009307 415 AGGGLLVVIVHEAQDVEGK---HHTNPYARILFRGEERKTKHVKKNRDPRWEEEFQFMLEEPPTNDRLHVEVCSVSSRIG 491 (538)
Q Consensus 415 ~~~g~L~v~v~~a~~L~~~---~~~dpyv~v~~~~~~~kT~v~~~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d~~~~~g 491 (538)
...|.|.|+|.+|++|+.. +.+||||++++++..++|++++++.||.|||.|.|.+... ....|.++|||++.
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~-~~~~l~~~v~d~d~--- 459 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDL-YQDVLCLTLFDRDQ--- 459 (510)
T ss_dssp --CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCT-TTCEEEEEEEECCS---
T ss_pred CCCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCC-CCCEEEEEEEeCCC---
Confidence 3578999999999999763 5799999999999999999999999999999999999765 44689999999986
Q ss_pred CCCCCceeEEEEEechhhcccce----eceEEEeCCCCCcEEEEEEEEE
Q 009307 492 LLHPKETLGYIDINLSDVVSNKR----INEKYHLIDSKNGRIQIELQWR 536 (538)
Q Consensus 492 ~~~~d~~lG~~~i~l~~l~~~~~----~~~~~~L~~~~~G~I~l~~~w~ 536 (538)
+++|++||++.++++++..+.. ...|++|.+..+|+|+++++.+
T Consensus 460 -~~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 460 -FSPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEVPTGEVWVRFDLQ 507 (510)
T ss_dssp -SSSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSSSSCEEEEEEEEE
T ss_pred -CCCCCceEEEEEEHHHhccccCCCCceeeeecCCCCCCceEEEEEEEE
Confidence 6789999999999999987543 7799999988899999988764
No 79
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.54 E-value=9.5e-14 Score=119.28 Aligned_cols=89 Identities=24% Similarity=0.324 Sum_probs=74.2
Q ss_pred CceEEEEEEEeeecCCCCCCCCcEEEEEECCeEEEeeeec-CCCCCcccceEEEEecCCCCCCeEEEEEEEcccCccCCC
Q 009307 416 GGGLLVVIVHEAQDVEGKHHTNPYARILFRGEERKTKHVK-KNRDPRWEEEFQFMLEEPPTNDRLHVEVCSVSSRIGLLH 494 (538)
Q Consensus 416 ~~g~L~v~v~~a~~L~~~~~~dpyv~v~~~~~~~kT~v~~-~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d~~~~~g~~~ 494 (538)
..+.|.|+|++|++++..+.+||||++. ++..+|++++ ++.||.|||.|.|.+.+. ...|.++|||++ ++
T Consensus 3 ~~~~L~V~V~~A~~l~~~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~--~~~L~~~V~D~d-----~~ 73 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGAQEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINRL--DLGLTVEVWNKG-----LI 73 (131)
T ss_dssp CCEEEEEEEEEEECSSCGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECCC--SSEEEEEEEECC-----SS
T ss_pred cceEEEEEEEEeECCCCCCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeCC--CCeEEEEEEECC-----CC
Confidence 4689999999999997667899999999 3344565554 799999999999999863 457999999997 35
Q ss_pred CCceeEEEEEechhhcccc
Q 009307 495 PKETLGYIDINLSDVVSNK 513 (538)
Q Consensus 495 ~d~~lG~~~i~l~~l~~~~ 513 (538)
+|++||++.++|+++....
T Consensus 74 ~dd~iG~~~i~l~~l~~~~ 92 (131)
T 2cjt_A 74 WDTMVGTVWIPLRTIRQSN 92 (131)
T ss_dssp CEEEEEEEEEEGGGSCBCS
T ss_pred CCCeEEEEEEEHHHhhhcC
Confidence 7999999999999987643
No 80
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.51 E-value=1.1e-13 Score=149.14 Aligned_cols=123 Identities=25% Similarity=0.441 Sum_probs=100.1
Q ss_pred CeeEEEEEEEeecCCccCCC--CCCCCcEEEEEEcCc--cCCeeeeeecCCC-CCCeEecEEEEEeeCCCCCEEEEEEEe
Q 009307 258 PVGILHVKVVKAMNLKKKDL--LGASDPYVKLKITED--KLPSKKTTVKHKN-LNPEWNEEYNFTVRDPESQAVELAVYD 332 (538)
Q Consensus 258 ~~g~L~V~v~~a~~L~~~d~--~g~~dpyv~v~~~~~--~~~~~~T~v~~~t-~nP~w~e~f~f~v~~~~~~~L~i~v~d 332 (538)
..+.|+|+|++|++|+..+. .|.+||||++++.+. ...++||++++++ .||+|||+|.|.+..+....|+|+|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 57899999999999998874 689999999999653 2235699999987 999999999999987766799999999
Q ss_pred ccCCCCCcccEEEEEeCccCCCCCCeEEEEecccccccCCCCCCc-cccEEEEEEEEE
Q 009307 333 WEQVGKHDKMGMNVVPLKELTPEEPSVKTLDLLKNMDLNDGQNEK-SRGQLVVEFIYK 389 (538)
Q Consensus 333 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~-~~G~l~l~l~~~ 389 (538)
+|..++|++||++.++|..+..+. .+++|... .+.. ..|.|.+.+.|.
T Consensus 575 ~D~~~~dd~iG~~~ipl~~L~~G~---r~v~L~d~------~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 575 YDSSSKNDFIGQSTIPWNSLKQGY---RHVHLLSK------NGDQHPSATLFVKISIQ 623 (624)
T ss_dssp CCSSSCCEEEEEEEEEGGGBCCEE---EEEEEECT------TSCEEEEEEEEEEEEEE
T ss_pred cCCCCCCceeEEEEEEHHHcCCCc---EEEeCCCC------CcCCCCceEEEEEEEEE
Confidence 999999999999999999998653 35665321 1122 457888888774
No 81
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.49 E-value=2e-13 Score=122.17 Aligned_cols=88 Identities=23% Similarity=0.329 Sum_probs=74.3
Q ss_pred ceEEEEEEEeeecCCCCCCCCcEEEEEECCeEEEeeeec-CCCCCcccceEEEEecCCCCCCeEEEEEEEcccCccCCCC
Q 009307 417 GGLLVVIVHEAQDVEGKHHTNPYARILFRGEERKTKHVK-KNRDPRWEEEFQFMLEEPPTNDRLHVEVCSVSSRIGLLHP 495 (538)
Q Consensus 417 ~g~L~v~v~~a~~L~~~~~~dpyv~v~~~~~~~kT~v~~-~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d~~~~~g~~~~ 495 (538)
.+.|+|+|++|++++..+.+||||++. ++..+|++++ ++.||.|||.|.|.+.+. ...|.++|||++ +++
T Consensus 13 ~~~L~V~V~~A~~l~~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~--~~~L~~~V~D~d-----~~~ 83 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDGAQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRL--DLGLTVEVWNKG-----LIW 83 (167)
T ss_dssp CCEEEEEEEEEECSSCGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCT--TSEEEEEEEECC-----SSC
T ss_pred eEEEEEEEEEEECCCCCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCC--CCEEEEEEEECC-----CCC
Confidence 679999999999987667899999999 3345676665 699999999999999863 458999999997 357
Q ss_pred CceeEEEEEechhhcccc
Q 009307 496 KETLGYIDINLSDVVSNK 513 (538)
Q Consensus 496 d~~lG~~~i~l~~l~~~~ 513 (538)
|++||++.++|+++....
T Consensus 84 dd~iG~~~i~L~~l~~~~ 101 (167)
T 2cjs_A 84 DTMVGTVWIPLRTIRQSN 101 (167)
T ss_dssp CEEEEEEEEEGGGSCBCS
T ss_pred CceEEEEEEEHHHhcccC
Confidence 999999999999987643
No 82
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.45 E-value=7.7e-13 Score=139.27 Aligned_cols=109 Identities=26% Similarity=0.352 Sum_probs=92.2
Q ss_pred CceEEEEEEEeeecCCC--CCCCCcEEEEEECCeEEEeeeecCCCCCcccceEEEEecCCCCCCeEEEEEEEcccCccCC
Q 009307 416 GGGLLVVIVHEAQDVEG--KHHTNPYARILFRGEERKTKHVKKNRDPRWEEEFQFMLEEPPTNDRLHVEVCSVSSRIGLL 493 (538)
Q Consensus 416 ~~g~L~v~v~~a~~L~~--~~~~dpyv~v~~~~~~~kT~v~~~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d~~~~~g~~ 493 (538)
..|.|.|+|++|++|+. .+.+||||+++++++..+|++++++.||+|||.|.|.+...+..+.|.|+|||++. +
T Consensus 392 ~~~~L~V~V~~A~~L~~D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~----~ 467 (540)
T 3nsj_A 392 GLAHLVVSNFRAEHLWGDYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADY----G 467 (540)
T ss_dssp TEEEEEEEEEEEESCCCSSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCS----S
T ss_pred cccEEEEEEEEccCCCcccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCC----C
Confidence 47899999999999986 25799999999999889999999999999999999987543345689999999986 5
Q ss_pred CCCceeEEEEEechhhcccceeceEEEeCCCCCcEEEEEEEE
Q 009307 494 HPKETLGYIDINLSDVVSNKRINEKYHLIDSKNGRIQIELQW 535 (538)
Q Consensus 494 ~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~G~I~l~~~w 535 (538)
+.|++||++.++|.. +....|++|. .|.|+++++.
T Consensus 468 ~~dD~LG~~~~~L~~----g~~~~~~~l~---~G~l~~~~~~ 502 (540)
T 3nsj_A 468 WDDDLLGSCDRSPHS----GFHEVTCELN---HGRVKFSYHA 502 (540)
T ss_dssp SCCEEEEEEEECCCS----EEEEEEEECS---SSEEEEEEEE
T ss_pred CCCCEEEEEEEEeeC----CcEEEEEEcC---CeEEEEEEEE
Confidence 678999999999972 4456888874 6888887764
No 83
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.40 E-value=2.5e-14 Score=150.23 Aligned_cols=127 Identities=17% Similarity=0.258 Sum_probs=22.0
Q ss_pred CeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCccCCeeeeeecCCC---CCCeEecEEEEEeeCCCCCEEEEEEEec-
Q 009307 258 PVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLPSKKTTVKHKN---LNPEWNEEYNFTVRDPESQAVELAVYDW- 333 (538)
Q Consensus 258 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~T~v~~~t---~nP~w~e~f~f~v~~~~~~~L~i~v~d~- 333 (538)
..|.|+|+|++|++|+++| ||||++++++... .||+++++| .||.|||+|.|.+... ...|.++|||+
T Consensus 9 ~~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~--~kT~v~~kt~~glnP~WnE~F~f~~~~~-~~~L~v~V~d~~ 80 (483)
T 3bxj_A 9 VDNVLKLWIIEARELPPKK-----RYYCELCLDDMLY--ARTTSKPRSASGDTVFWGEHFEFNNLPA-VRALRLHLYRDS 80 (483)
T ss_dssp EEECC----------------------------------------------------CCEECC-----------------
T ss_pred eccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEE--eeeeEEeCCCCCCCCccccEEEEecCCC-ccEEEEEEEecC
Confidence 4688999999999999876 9999999987543 589999999 9999999999987544 57899999995
Q ss_pred c---CCCCCcccEEEEEeCccCCCCCCeEEEEecccccccC-----------------CCCCCccccEEEEEEEEEecc
Q 009307 334 E---QVGKHDKMGMNVVPLKELTPEEPSVKTLDLLKNMDLN-----------------DGQNEKSRGQLVVEFIYKPFK 392 (538)
Q Consensus 334 ~---~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~~~~~~-----------------~~~~~~~~G~l~l~l~~~p~~ 392 (538)
| ..++|++||++.+++.++..+...+.|++|....... ..++....|.|++++.|.+..
T Consensus 81 d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~~~~~ 159 (483)
T 3bxj_A 81 DKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQTMS 159 (483)
T ss_dssp --------------------------CCEECC--------------------------------------CEEEEEECC
T ss_pred CccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEEeeeee
Confidence 4 3678999999999999999887778888874322100 001123569999999998753
No 84
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.33 E-value=4.6e-12 Score=137.48 Aligned_cols=108 Identities=19% Similarity=0.413 Sum_probs=93.4
Q ss_pred CceEEEEEEEeeecCCC---C---CCCCcEEEEEECC---eEEEeeeecCCCCCcccceEEEEecCCCCCCeEEEEEEEc
Q 009307 416 GGGLLVVIVHEAQDVEG---K---HHTNPYARILFRG---EERKTKHVKKNRDPRWEEEFQFMLEEPPTNDRLHVEVCSV 486 (538)
Q Consensus 416 ~~g~L~v~v~~a~~L~~---~---~~~dpyv~v~~~~---~~~kT~v~~~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d~ 486 (538)
..+.|+|+|++|++|+. . +.+||||++++++ .+++|++++++.||+|||.|+|.+... ....|.|+|||+
T Consensus 16 ~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~-~~~~L~~~V~D~ 94 (749)
T 1cjy_A 16 YSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPN-QENVLEITLMDA 94 (749)
T ss_dssp CCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTT-SCCBCEEEEEEC
T ss_pred CccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCC-CCCEEEEEEEEC
Confidence 57899999999999987 3 5799999999984 577999999999999999999999874 456899999999
Q ss_pred ccCccCCCCCceeEEEEEechhhcccceeceEEEeCCCCCcEEEE
Q 009307 487 SSRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDSKNGRIQI 531 (538)
Q Consensus 487 ~~~~g~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~G~I~l 531 (538)
+. ++ |++||++.++|.++..+....+|++|... +++.+
T Consensus 95 D~----~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~~~--~e~~l 132 (749)
T 1cjy_A 95 NY----VM-DETLGTATFTVSSMKVGEKKEVPFIFNQV--TEMVL 132 (749)
T ss_dssp CS----SS-CEEEEEECCBSTTSCTTCCCCEEEEETTT--EEEEE
T ss_pred CC----CC-CceeEEEEEEHHHcCCCCceEEEEecCCC--ceEee
Confidence 86 56 99999999999999877777899999753 44443
No 85
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.31 E-value=1.4e-11 Score=132.68 Aligned_cols=114 Identities=18% Similarity=0.294 Sum_probs=95.2
Q ss_pred CCceEEEEEEEeeecCCCC-----CCCCcEEEEEECC-----eEEEeeeecCC-CCCcccceEEEEecCCCCCCeEEEEE
Q 009307 415 AGGGLLVVIVHEAQDVEGK-----HHTNPYARILFRG-----EERKTKHVKKN-RDPRWEEEFQFMLEEPPTNDRLHVEV 483 (538)
Q Consensus 415 ~~~g~L~v~v~~a~~L~~~-----~~~dpyv~v~~~~-----~~~kT~v~~~t-~nP~w~e~f~f~v~~~~~~~~l~v~V 483 (538)
...+.|+|+|++|++|+.. +.+||||++.+.+ .+++|++++++ .||+|||.|+|.+..+ ....|.++|
T Consensus 494 ~~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~-el~~L~~~V 572 (624)
T 1djx_A 494 WRPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVP-DLALVRFMV 572 (624)
T ss_dssp CCCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCG-GGCEEEEEE
T ss_pred ccceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecC-CCCEEEEEE
Confidence 3678999999999999763 4789999999955 46799999997 9999999999999865 335899999
Q ss_pred EEcccCccCCCCCceeEEEEEechhhcccceeceEEEeCCCC-----CcEEEEEEEEE
Q 009307 484 CSVSSRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDSK-----NGRIQIELQWR 536 (538)
Q Consensus 484 ~d~~~~~g~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~-----~G~I~l~~~w~ 536 (538)
||++. ++++++||++.++|+++..+. +|++|.+.. .+.|.|.+++.
T Consensus 573 ~D~D~----~~~dd~iG~~~ipl~~L~~G~---r~v~L~d~~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 573 EDYDS----SSKNDFIGQSTIPWNSLKQGY---RHVHLLSKNGDQHPSATLFVKISIQ 623 (624)
T ss_dssp EECCS----SSCCEEEEEEEEEGGGBCCEE---EEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred EEcCC----CCCCceeEEEEEEHHHcCCCc---EEEeCCCCCcCCCCceEEEEEEEEE
Confidence 99985 678999999999999986643 689997653 47788888764
No 86
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.30 E-value=2.2e-13 Score=143.01 Aligned_cols=117 Identities=12% Similarity=0.212 Sum_probs=20.9
Q ss_pred CceEEEEEEEeeecCCCCCCCCcEEEEEECCe-EEEeeeecCC---CCCcccceEEEEecCCCCCCeEEEEEEEc-ccCc
Q 009307 416 GGGLLVVIVHEAQDVEGKHHTNPYARILFRGE-ERKTKHVKKN---RDPRWEEEFQFMLEEPPTNDRLHVEVCSV-SSRI 490 (538)
Q Consensus 416 ~~g~L~v~v~~a~~L~~~~~~dpyv~v~~~~~-~~kT~v~~~t---~nP~w~e~f~f~v~~~~~~~~l~v~V~d~-~~~~ 490 (538)
..+.|+|+|++|++|+.++ ||||+++++++ ..||++++++ .||.|||.|+|.+... ...+.++|||+ +..
T Consensus 9 ~~~~L~V~VieAk~L~~~d--dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~--~~~L~v~V~d~~d~~- 83 (483)
T 3bxj_A 9 VDNVLKLWIIEARELPPKK--RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPA--VRALRLHLYRDSDKK- 83 (483)
T ss_dssp EEECC-----------------------------------------------CCEECC----------------------
T ss_pred eccEEEEEEEEcCCcCCCC--CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCC--ccEEEEEEEecCCcc-
Confidence 3678999999999998864 99999999886 4599999999 9999999999987542 36899999995 310
Q ss_pred cCCCCCceeEEEEEechhhcccceeceEEEeCCC---------------------------CCcEEEEEEEEEe
Q 009307 491 GLLHPKETLGYIDINLSDVVSNKRINEKYHLIDS---------------------------KNGRIQIELQWRT 537 (538)
Q Consensus 491 g~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~---------------------------~~G~I~l~~~w~p 537 (538)
+.+++|++||++.|+++++..+...++||+|.+. ..|.|+|+++|.+
T Consensus 84 ~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~~~ 157 (483)
T 3bxj_A 84 RKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQT 157 (483)
T ss_dssp -----------------------CCEECC--------------------------------------CEEEEEE
T ss_pred ccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEEeee
Confidence 0045789999999999999887777899999532 1489999999986
No 87
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.24 E-value=9.8e-12 Score=136.40 Aligned_cols=108 Identities=33% Similarity=0.552 Sum_probs=92.2
Q ss_pred CeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCc--cCCeeeeeecCCCCCCeEecEEEEEeeCCC-CCEEEEEEEecc
Q 009307 258 PVGILHVKVVKAMNLKKKDLLGASDPYVKLKITED--KLPSKKTTVKHKNLNPEWNEEYNFTVRDPE-SQAVELAVYDWE 334 (538)
Q Consensus 258 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~--~~~~~~T~v~~~t~nP~w~e~f~f~v~~~~-~~~L~i~v~d~~ 334 (538)
..+.|.|+|++|++|..+|..|.+||||++++.+. ...+.+|+++++++||.|||+|.|.+.... ...|.++|||+|
T Consensus 170 ~~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d 249 (674)
T 3pfq_A 170 DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWD 249 (674)
T ss_dssp CSSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECC
T ss_pred ccceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeecc
Confidence 35789999999999999999999999999999543 234579999999999999999999987543 457999999999
Q ss_pred CCCCCcccEEEEEeCccCCCCCCeEEEEeccc
Q 009307 335 QVGKHDKMGMNVVPLKELTPEEPSVKTLDLLK 366 (538)
Q Consensus 335 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~ 366 (538)
..++|++||++.++++++.... ...|+.+..
T Consensus 250 ~~~~dd~iG~~~i~l~~l~~~~-~~~w~~Lls 280 (674)
T 3pfq_A 250 LTSRNDFMGSLSFGISELQKAG-VDGWFKLLS 280 (674)
T ss_dssp SSSCCEECCBCCCBTTHHHHCC-EEEEEECBC
T ss_pred cccccccccccccchhhhccCC-cccceeecc
Confidence 9999999999999999998654 466777643
No 88
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.16 E-value=1.4e-10 Score=127.29 Aligned_cols=104 Identities=23% Similarity=0.501 Sum_probs=89.0
Q ss_pred ceEEEEEEEeeecCCCC---CCCCcEEEEEE-----CCeEEEeeeecCCCCCcccceEEEEecCCCCCCeEEEEEEEccc
Q 009307 417 GGLLVVIVHEAQDVEGK---HHTNPYARILF-----RGEERKTKHVKKNRDPRWEEEFQFMLEEPPTNDRLHVEVCSVSS 488 (538)
Q Consensus 417 ~g~L~v~v~~a~~L~~~---~~~dpyv~v~~-----~~~~~kT~v~~~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d~~~ 488 (538)
.+.|.|++.+|++|... +.+||||++.+ ...+++|++++++.||.|||.|.|.+........|.++|||++.
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~ 250 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 250 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCS
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeeccc
Confidence 56899999999999763 68999999999 33567999999999999999999999865445579999999986
Q ss_pred CccCCCCCceeEEEEEechhhcccceeceEEEeCCCC
Q 009307 489 RIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDSK 525 (538)
Q Consensus 489 ~~g~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~ 525 (538)
++++++||++.++++++..... .+||.|....
T Consensus 251 ----~~~dd~iG~~~i~l~~l~~~~~-~~w~~Lls~~ 282 (674)
T 3pfq_A 251 ----TSRNDFMGSLSFGISELQKAGV-DGWFKLLSQE 282 (674)
T ss_dssp ----SSCCEECCBCCCBTTHHHHCCE-EEEEECBCTT
T ss_pred ----ccccccccccccchhhhccCCc-ccceeecccc
Confidence 6789999999999999987654 8999997643
No 89
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.15 E-value=1.6e-10 Score=127.39 Aligned_cols=118 Identities=17% Similarity=0.286 Sum_probs=90.2
Q ss_pred eeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCcc---CCeeeeeecCC-CCCCeEec-EEEEE-eeCCCCCEEEEEEEe
Q 009307 259 VGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDK---LPSKKTTVKHK-NLNPEWNE-EYNFT-VRDPESQAVELAVYD 332 (538)
Q Consensus 259 ~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~---~~~~~T~v~~~-t~nP~w~e-~f~f~-v~~~~~~~L~i~v~d 332 (538)
...|.|+|++|++|+.. .+||||+|.+.+.. ..+++|+++++ +.||+||| +|.|. +..++...|+|+|||
T Consensus 724 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D 799 (885)
T 3ohm_B 724 ANALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFE 799 (885)
T ss_dssp CEEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred ceEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEc
Confidence 35899999999999853 68999999997521 12358999875 59999999 69998 766666789999999
Q ss_pred ccCCCCCcccEEEEEeCccCCCCCCeEEEEecccccccCCCCCCccccEEEEEEEEEecc
Q 009307 333 WEQVGKHDKMGMNVVPLKELTPEEPSVKTLDLLKNMDLNDGQNEKSRGQLVVEFIYKPFK 392 (538)
Q Consensus 333 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~~~p~~ 392 (538)
+| |++||++.+||..|..+. ..++|.... ...-..|.|.+.+.+....
T Consensus 800 ~d----ddfiG~~~lpL~~L~~Gy---R~vpL~~~~-----g~~l~~atLfv~i~~~~~~ 847 (885)
T 3ohm_B 800 EG----GKFVGHRILPVSAIRSGY---HYVCLRNEA-----NQPLCLPALLIYTEASDYI 847 (885)
T ss_dssp TT----TEEEEEEEEETTTCCCEE---EEEEEECTT-----SCEEEEEEEEEEEEEEECC
T ss_pred CC----ccEEeeEEEEHHHcCCCc---eEEEecCCC-----CCccCceEEEEEEEEEecC
Confidence 87 789999999999998753 234443210 0122578999999888654
No 90
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.12 E-value=2.4e-10 Score=126.02 Aligned_cols=115 Identities=20% Similarity=0.325 Sum_probs=86.8
Q ss_pred CeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCc---cCCeeeee-ecC-CCCCCeEec-EEEE-EeeCCCCCEEEEEE
Q 009307 258 PVGILHVKVVKAMNLKKKDLLGASDPYVKLKITED---KLPSKKTT-VKH-KNLNPEWNE-EYNF-TVRDPESQAVELAV 330 (538)
Q Consensus 258 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~---~~~~~~T~-v~~-~t~nP~w~e-~f~f-~v~~~~~~~L~i~v 330 (538)
..|.|.|+|++|++|+. +.+||||+|.+.+. ...+++|+ +++ ++.||+||| +|.| .+..++...|+|.|
T Consensus 676 ~~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V 751 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAV 751 (799)
T ss_dssp TCEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEE
T ss_pred eeeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEE
Confidence 46899999999999985 46899999999642 22346898 776 569999999 6999 88766667899999
Q ss_pred EeccCCCCCcccEEEEEeCccCCCCCCeEEEEecccccccCCCCCC-ccccEEEEEEEEE
Q 009307 331 YDWEQVGKHDKMGMNVVPLKELTPEEPSVKTLDLLKNMDLNDGQNE-KSRGQLVVEFIYK 389 (538)
Q Consensus 331 ~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~~~~~~~~~~~-~~~G~l~l~l~~~ 389 (538)
||+| +++||++.+|++.|..+ ..+++|... .+. -..+.|.+.+.+.
T Consensus 752 ~D~d----~d~iG~~~ipl~~L~~G---~r~v~L~~~------~g~~~~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 752 MEEG----NKFLGHRIIPINALNSG---YHHLCLHSE------SNMPLTMPALFIFLEMK 798 (799)
T ss_dssp EETT----TEEEEEEEEEGGGBCCE---EEEEEEECT------TCCEEEEEEEEEEEEEE
T ss_pred EEeC----CCccceEeeehhhcCCC---cEEEeccCC------CCCCCCceEEEEEEEEE
Confidence 9986 78999999999999865 234555321 111 2346777777653
No 91
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.12 E-value=3.3e-10 Score=124.26 Aligned_cols=118 Identities=19% Similarity=0.352 Sum_probs=89.7
Q ss_pred eeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCccC----CeeeeeecCC-CCCCeEecE-EEEE-eeCCCCCEEEEEEE
Q 009307 259 VGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKL----PSKKTTVKHK-NLNPEWNEE-YNFT-VRDPESQAVELAVY 331 (538)
Q Consensus 259 ~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~----~~~~T~v~~~-t~nP~w~e~-f~f~-v~~~~~~~L~i~v~ 331 (538)
.+.|+|+|++|++|+.+ .+||||+|.+.+... .+++|+++++ +.||+|||+ |.|. +..++...|+|+||
T Consensus 649 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~ 724 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVS 724 (816)
T ss_dssp CEEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEE
T ss_pred ceEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEE
Confidence 47899999999999853 689999999976321 3468999875 699999998 9998 76666678999999
Q ss_pred eccCCCCCcccEEEEEeCccCCCCCCeEEEEecccccccCCCCCCccccEEEEEEEEEecc
Q 009307 332 DWEQVGKHDKMGMNVVPLKELTPEEPSVKTLDLLKNMDLNDGQNEKSRGQLVVEFIYKPFK 392 (538)
Q Consensus 332 d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~~~p~~ 392 (538)
|++ +++||++.+||+.|..+. ..++|.... ...-..+.|.+.+.+....
T Consensus 725 D~d----ddfiG~~~ipL~~L~~Gy---R~vpL~~~~-----g~~~~~atLfv~i~~~~~~ 773 (816)
T 3qr0_A 725 EEN----GKFIGHRVMPLDGIKPGY---RHVPLRNES-----NRPLGLASVFAHIVAKDYV 773 (816)
T ss_dssp ETT----SCEEEEEEEESTTCCCEE---EEEEEECTT-----SCEEEEEEEEEEEEEEECC
T ss_pred ecC----CCeeeEEEEEHHHcCCcc---eEEEEeCCC-----CCCCCceEEEEEEEEEecC
Confidence 985 789999999999998763 234543210 0122347888888777543
No 92
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.99 E-value=4.9e-09 Score=86.00 Aligned_cols=114 Identities=15% Similarity=0.239 Sum_probs=85.8
Q ss_pred CeeEEEEEEEeecCCccCCCCCCCCcEEEEEEcCccCC-eeee-eecCCCCCCeEecEEEEEeeCCCCCEEEEEEEeccC
Q 009307 258 PVGILHVKVVKAMNLKKKDLLGASDPYVKLKITEDKLP-SKKT-TVKHKNLNPEWNEEYNFTVRDPESQAVELAVYDWEQ 335 (538)
Q Consensus 258 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~-~~~T-~v~~~t~nP~w~e~f~f~v~~~~~~~L~i~v~d~~~ 335 (538)
..+.|+|...++.--+-.......||||.+.+...... ..+| ..++.|..|+|||+|.-.+.+ .+.|.+.|++...
T Consensus 4 m~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a~ 81 (126)
T 1yrk_A 4 MAPFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE--GRVIQIVLMRAAE 81 (126)
T ss_dssp CCCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT--TCEEEEEEEEETT
T ss_pred cCccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC--CEEEEEEEEcCCC
Confidence 34678888866653222222235799999999754321 2355 777889999999999999876 5899999997653
Q ss_pred CCCCcccEEEEEeCccCC-----CCCCeEEEEecccccccCCCCCCccccEEEEEEEEE
Q 009307 336 VGKHDKMGMNVVPLKELT-----PEEPSVKTLDLLKNMDLNDGQNEKSRGQLVVEFIYK 389 (538)
Q Consensus 336 ~~~d~~lG~~~i~l~~l~-----~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~~~ 389 (538)
++++.|.+++++|. .+...+.|++| ++.|+|++.+.|+
T Consensus 82 ----~fvAn~tV~~edL~~~c~~~~g~~e~WvdL------------eP~Gkl~~~i~~~ 124 (126)
T 1yrk_A 82 ----EPVSEVTVGVSVLAERCKKNNGKAEFWLDL------------QPQAKVLMSVQYF 124 (126)
T ss_dssp ----EEEEEEEEEHHHHHHHHHTTTTEEEEEEEC------------BSSCEEEEEEEEE
T ss_pred ----CeeeEEEEEHHHHHhhhccCCCceEEEEec------------ccCcEEEEEEEEe
Confidence 89999999999998 34456788886 4689999999987
No 93
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.93 E-value=7.4e-09 Score=113.64 Aligned_cols=108 Identities=18% Similarity=0.258 Sum_probs=86.6
Q ss_pred CceEEEEEEEeeecCCCCCCCCcEEEEEECC-------eEEEeeeecC-CCCCcccce-EEEE-ecCCCCCCeEEEEEEE
Q 009307 416 GGGLLVVIVHEAQDVEGKHHTNPYARILFRG-------EERKTKHVKK-NRDPRWEEE-FQFM-LEEPPTNDRLHVEVCS 485 (538)
Q Consensus 416 ~~g~L~v~v~~a~~L~~~~~~dpyv~v~~~~-------~~~kT~v~~~-t~nP~w~e~-f~f~-v~~~~~~~~l~v~V~d 485 (538)
..+.|.|+|++|++|+.. .+||||+|.+.+ ++++|+++++ +.||+|||. |+|. +..+ .-..|.++|+|
T Consensus 648 ~~~~L~V~Visaq~L~~~-~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~p-ela~Lrf~V~D 725 (816)
T 3qr0_A 648 VAGTIEIKIISAQFLSDK-QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLP-DLAVVRIIVSE 725 (816)
T ss_dssp CCEEEEEEEEEEECCCSS-CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCG-GGCEEEEEEEE
T ss_pred cceEEEEEEEEcccCCCC-CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCC-CccEEEEEEEe
Confidence 357899999999999864 689999999975 4569999986 699999998 9998 7654 33589999999
Q ss_pred cccCccCCCCCceeEEEEEechhhcccceeceEEEeCCCC-----CcEEEEEEEEE
Q 009307 486 VSSRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDSK-----NGRIQIELQWR 536 (538)
Q Consensus 486 ~~~~~g~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~-----~G~I~l~~~w~ 536 (538)
++ +++||++.++|+.|..+- ++.+|.+.. .+.|.|.+..+
T Consensus 726 ~d--------ddfiG~~~ipL~~L~~Gy---R~vpL~~~~g~~~~~atLfv~i~~~ 770 (816)
T 3qr0_A 726 EN--------GKFIGHRVMPLDGIKPGY---RHVPLRNESNRPLGLASVFAHIVAK 770 (816)
T ss_dssp TT--------SCEEEEEEEESTTCCCEE---EEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred cC--------CCeeeEEEEEHHHcCCcc---eEEEEeCCCCCCCCceEEEEEEEEE
Confidence 74 589999999999986643 578887653 26676766654
No 94
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.92 E-value=7.4e-09 Score=86.02 Aligned_cols=114 Identities=16% Similarity=0.236 Sum_probs=87.5
Q ss_pred CeeEEEEEEEeecCCccCC-CCCCCCcEEEEEEcCccC-Ceeee-eecCCCCCCeEecEEEEEeeCCCCCEEEEEEEecc
Q 009307 258 PVGILHVKVVKAMNLKKKD-LLGASDPYVKLKITEDKL-PSKKT-TVKHKNLNPEWNEEYNFTVRDPESQAVELAVYDWE 334 (538)
Q Consensus 258 ~~g~L~V~v~~a~~L~~~d-~~g~~dpyv~v~~~~~~~-~~~~T-~v~~~t~nP~w~e~f~f~v~~~~~~~L~i~v~d~~ 334 (538)
..+.|+|...++.--+... .....||||.+.+..... ...+| ..++.|..|+|||+|.-.+.+ .+.|.|.|++..
T Consensus 8 m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a 85 (138)
T 2enj_A 8 MSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK--GRVMQIIVKGKN 85 (138)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS--SCEEEEEEECSS
T ss_pred cCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC--CeEEEEEEEcCC
Confidence 4567888887766433222 123579999999975432 23567 677789999999999998876 589999999654
Q ss_pred CCCCCcccEEEEEeCccCC-----CCCCeEEEEecccccccCCCCCCccccEEEEEEEEE
Q 009307 335 QVGKHDKMGMNVVPLKELT-----PEEPSVKTLDLLKNMDLNDGQNEKSRGQLVVEFIYK 389 (538)
Q Consensus 335 ~~~~d~~lG~~~i~l~~l~-----~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~~~ 389 (538)
. +|+..|.+++++|. .+...+.|++| ++.|+|++.+.|+
T Consensus 86 ~----~fVAn~tV~~edL~~~ck~~~g~~e~WvdL------------eP~Gkl~v~i~~~ 129 (138)
T 2enj_A 86 V----DLISETTVELYSLAERCRKNNGKTEIWLEL------------KPQGRMLMNARYF 129 (138)
T ss_dssp C----SCCEEEEEESHHHHHHHHHTTTCEEEEEEC------------BSSCEEEEEEEEC
T ss_pred C----CeeeEEEEEHHHHHhhhccCCCceEEEEec------------ccCcEEEEEEEEE
Confidence 3 89999999999998 44566889886 4689999999997
No 95
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.92 E-value=7.6e-09 Score=114.13 Aligned_cols=108 Identities=21% Similarity=0.261 Sum_probs=85.9
Q ss_pred CceEEEEEEEeeecCCCCCCCCcEEEEEECC------eEEEee-eecC-CCCCcccc-eEEE-EecCCCCCCeEEEEEEE
Q 009307 416 GGGLLVVIVHEAQDVEGKHHTNPYARILFRG------EERKTK-HVKK-NRDPRWEE-EFQF-MLEEPPTNDRLHVEVCS 485 (538)
Q Consensus 416 ~~g~L~v~v~~a~~L~~~~~~dpyv~v~~~~------~~~kT~-v~~~-t~nP~w~e-~f~f-~v~~~~~~~~l~v~V~d 485 (538)
..+.|.|+|++|++|+. +.+||||+|.+.+ +++||+ ++++ +.||+||| .|+| .+..+ ....|.++|+|
T Consensus 676 ~~~~L~V~Visa~~L~~-~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~-el~~Lr~~V~D 753 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE-RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMP-ELASLRVAVME 753 (799)
T ss_dssp TCEEEEEEEEEEESCCS-SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSG-GGCEEEEEEEE
T ss_pred eeeeEEEEEEeccccCc-cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccC-CccEEEEEEEE
Confidence 46799999999999986 4789999999954 246899 8875 69999999 6999 78654 33489999999
Q ss_pred cccCccCCCCCceeEEEEEechhhcccceeceEEEeCCCC-----CcEEEEEEEEE
Q 009307 486 VSSRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDSK-----NGRIQIELQWR 536 (538)
Q Consensus 486 ~~~~~g~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~-----~G~I~l~~~w~ 536 (538)
++ +++||++.++|+.|..+ .++++|.+.. .+.+.|.++++
T Consensus 754 ~d--------~d~iG~~~ipl~~L~~G---~r~v~L~~~~g~~~~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 754 EG--------NKFLGHRIIPINALNSG---YHHLCLHSESNMPLTMPALFIFLEMK 798 (799)
T ss_dssp TT--------TEEEEEEEEEGGGBCCE---EEEEEEECTTCCEEEEEEEEEEEEEE
T ss_pred eC--------CCccceEeeehhhcCCC---cEEEeccCCCCCCCCceEEEEEEEEE
Confidence 85 58999999999998653 3578887643 36666777664
No 96
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.90 E-value=8.2e-09 Score=113.89 Aligned_cols=107 Identities=19% Similarity=0.224 Sum_probs=86.1
Q ss_pred ceEEEEEEEeeecCCCCCCCCcEEEEEECC------eEEEeeeecC-CCCCcccc-eEEEE-ecCCCCCCeEEEEEEEcc
Q 009307 417 GGLLVVIVHEAQDVEGKHHTNPYARILFRG------EERKTKHVKK-NRDPRWEE-EFQFM-LEEPPTNDRLHVEVCSVS 487 (538)
Q Consensus 417 ~g~L~v~v~~a~~L~~~~~~dpyv~v~~~~------~~~kT~v~~~-t~nP~w~e-~f~f~-v~~~~~~~~l~v~V~d~~ 487 (538)
...|.|+|++|++|+.. .+||||+|.+.+ .+++|+++++ +.||+||| .|.|. +..+ ....|.++|||++
T Consensus 724 ~~~L~V~Visaq~L~~~-~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~p-ela~Lrf~V~D~d 801 (885)
T 3ohm_B 724 ANALRVKVISGQFLSDR-KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLP-TLASLRIAAFEEG 801 (885)
T ss_dssp CEEEEEEEEEEESCCSS-CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCG-GGCEEEEEEEETT
T ss_pred ceEEEEEEEEeccCccc-CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcC-CcCEEEEEEEcCC
Confidence 45799999999999874 689999999965 2469999986 59999999 69998 6554 3358999999975
Q ss_pred cCccCCCCCceeEEEEEechhhcccceeceEEEeCCCC-----CcEEEEEEEEE
Q 009307 488 SRIGLLHPKETLGYIDINLSDVVSNKRINEKYHLIDSK-----NGRIQIELQWR 536 (538)
Q Consensus 488 ~~~g~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~-----~G~I~l~~~w~ 536 (538)
+++||++.++|+.|..+- ++.+|.+.. .|.|.|.+...
T Consensus 802 --------ddfiG~~~lpL~~L~~Gy---R~vpL~~~~g~~l~~atLfv~i~~~ 844 (885)
T 3ohm_B 802 --------GKFVGHRILPVSAIRSGY---HYVCLRNEANQPLCLPALLIYTEAS 844 (885)
T ss_dssp --------TEEEEEEEEETTTCCCEE---EEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred --------ccEEeeEEEEHHHcCCCc---eEEEecCCCCCccCceEEEEEEEEE
Confidence 589999999999986543 467887653 47888888766
No 97
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.88 E-value=8.5e-08 Score=78.66 Aligned_cols=108 Identities=12% Similarity=0.243 Sum_probs=84.7
Q ss_pred CceEEEEEEEeeec--CCC-CCCCCcEEEEEECCeE----EEe-eeecCCCCCcccceEEEEecCCCCCCeEEEEEEEcc
Q 009307 416 GGGLLVVIVHEAQD--VEG-KHHTNPYARILFRGEE----RKT-KHVKKNRDPRWEEEFQFMLEEPPTNDRLHVEVCSVS 487 (538)
Q Consensus 416 ~~g~L~v~v~~a~~--L~~-~~~~dpyv~v~~~~~~----~kT-~v~~~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d~~ 487 (538)
....|+|.+.++.- ++. ....||||.+.+.... .+| ...++|..|.||+.|.-.+.+. ..|.+.|+.+.
T Consensus 4 m~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~G---r~l~i~Vfh~a 80 (126)
T 1yrk_A 4 MAPFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYEG---RVIQIVLMRAA 80 (126)
T ss_dssp CCCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCTT---CEEEEEEEEET
T ss_pred cCccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeCC---EEEEEEEEcCC
Confidence 45678888766653 332 2368999999996543 154 6777899999999999999864 68999999653
Q ss_pred cCccCCCCCceeEEEEEechhhccc-----ceeceEEEeCCCCCcEEEEEEEEE
Q 009307 488 SRIGLLHPKETLGYIDINLSDVVSN-----KRINEKYHLIDSKNGRIQIELQWR 536 (538)
Q Consensus 488 ~~~g~~~~d~~lG~~~i~l~~l~~~-----~~~~~~~~L~~~~~G~I~l~~~w~ 536 (538)
.+++..+++++.+|.++ +..+-|.+|. ++|+|++.++|.
T Consensus 81 --------~~fvAn~tV~~edL~~~c~~~~g~~e~WvdLe--P~Gkl~~~i~~~ 124 (126)
T 1yrk_A 81 --------EEPVSEVTVGVSVLAERCKKNNGKAEFWLDLQ--PQAKVLMSVQYF 124 (126)
T ss_dssp --------TEEEEEEEEEHHHHHHHHHTTTTEEEEEEECB--SSCEEEEEEEEE
T ss_pred --------CCeeeEEEEEHHHHHhhhccCCCceEEEEecc--cCcEEEEEEEEe
Confidence 28999999999999953 4567899987 599999999985
No 98
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.82 E-value=7.2e-08 Score=80.12 Aligned_cols=108 Identities=13% Similarity=0.217 Sum_probs=85.2
Q ss_pred CceEEEEEEEeeecC--CC--CCCCCcEEEEEECCeE----EEe-eeecCCCCCcccceEEEEecCCCCCCeEEEEEEEc
Q 009307 416 GGGLLVVIVHEAQDV--EG--KHHTNPYARILFRGEE----RKT-KHVKKNRDPRWEEEFQFMLEEPPTNDRLHVEVCSV 486 (538)
Q Consensus 416 ~~g~L~v~v~~a~~L--~~--~~~~dpyv~v~~~~~~----~kT-~v~~~t~nP~w~e~f~f~v~~~~~~~~l~v~V~d~ 486 (538)
..+.|+|.+.+..-- +. ....||||.+.+.... .+| ...++|..|.||+.|.-.+.+. ..|.+.|+.+
T Consensus 8 m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~G---r~l~i~Vfh~ 84 (138)
T 2enj_A 8 MSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINKG---RVMQIIVKGK 84 (138)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCSS---CEEEEEEECS
T ss_pred cCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEECC---eEEEEEEEcC
Confidence 466788888776642 21 3468999999997542 366 6677899999999999998864 6899999954
Q ss_pred ccCccCCCCCceeEEEEEechhhccc-----ceeceEEEeCCCCCcEEEEEEEEE
Q 009307 487 SSRIGLLHPKETLGYIDINLSDVVSN-----KRINEKYHLIDSKNGRIQIELQWR 536 (538)
Q Consensus 487 ~~~~g~~~~d~~lG~~~i~l~~l~~~-----~~~~~~~~L~~~~~G~I~l~~~w~ 536 (538)
. .+++..++|.+.+|+++ +..+-|.+|. ++|+|++.++|.
T Consensus 85 a--------~~fVAn~tV~~edL~~~ck~~~g~~e~WvdLe--P~Gkl~v~i~~~ 129 (138)
T 2enj_A 85 N--------VDLISETTVELYSLAERCRKNNGKTEIWLELK--PQGRMLMNARYF 129 (138)
T ss_dssp S--------CSCCEEEEEESHHHHHHHHHTTTCEEEEEECB--SSCEEEEEEEEC
T ss_pred C--------CCeeeEEEEEHHHHHhhhccCCCceEEEEecc--cCcEEEEEEEEE
Confidence 3 38999999999999954 4567899987 599999999984
No 99
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=92.19 E-value=2 Score=38.89 Aligned_cols=57 Identities=11% Similarity=0.177 Sum_probs=40.8
Q ss_pred CeeeeeecCCCCCCeEecEEEEEeeCC--CCCEEEEEEEeccCC----CCCcccEEEEEeCcc
Q 009307 295 PSKKTTVKHKNLNPEWNEEYNFTVRDP--ESQAVELAVYDWEQV----GKHDKMGMNVVPLKE 351 (538)
Q Consensus 295 ~~~~T~v~~~t~nP~w~e~f~f~v~~~--~~~~L~i~v~d~~~~----~~d~~lG~~~i~l~~ 351 (538)
...+|.|...+.+|.|+|++.+.+... ....|.|++++...- ..+..+|.+-+||-.
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~ 139 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMR 139 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBC
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEccc
Confidence 346888889999999999999988743 356899999875421 112356777776643
No 100
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=91.34 E-value=1.5 Score=37.53 Aligned_cols=128 Identities=14% Similarity=0.166 Sum_probs=83.7
Q ss_pred CCCeeEEEEEEEeecCCccC-CCCCCCCcEEEEEEcCccCCeeeeeecCCCCCCeEecEEEEEeeCC-------CCCEEE
Q 009307 256 RRPVGILHVKVVKAMNLKKK-DLLGASDPYVKLKITEDKLPSKKTTVKHKNLNPEWNEEYNFTVRDP-------ESQAVE 327 (538)
Q Consensus 256 ~~~~g~L~V~v~~a~~L~~~-d~~g~~dpyv~v~~~~~~~~~~~T~v~~~t~nP~w~e~f~f~v~~~-------~~~~L~ 327 (538)
..-.+.+.|+|.++.--+.. ...+..+|+.-+.+.=-..+...|.+.. +.+|.+|.+-.+.+... .+..+.
T Consensus 14 ~~gEnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~ 92 (156)
T 2yrb_A 14 ERGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTIT 92 (156)
T ss_dssp CSSCEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEE
T ss_pred cCCCcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEE
Confidence 34568899999988732211 0123457766666654444445677665 78999999888888532 145788
Q ss_pred EEEEeccCCCCCcccEEEEEeCccCCCCCCe-EEEEecccccccCCCCCC-ccccEEEEEEEEEec
Q 009307 328 LAVYDWEQVGKHDKMGMNVVPLKELTPEEPS-VKTLDLLKNMDLNDGQNE-KSRGQLVVEFIYKPF 391 (538)
Q Consensus 328 i~v~d~~~~~~d~~lG~~~i~l~~l~~~~~~-~~~~~l~~~~~~~~~~~~-~~~G~l~l~l~~~p~ 391 (538)
++++... ...-+.+|.+.|++.++...+.+ .....+.. . .+. ..-|.|.+.+++...
T Consensus 93 lELhqa~-g~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g-~-----~g~~~~~G~LeywiRL~~P 151 (156)
T 2yrb_A 93 LEVHQAY-STEYETIAACQLKFHEILEKSGRIFCTASLIG-T-----KGDIPNFGTVEYWFRLRVS 151 (156)
T ss_dssp EEEEEEC-SSCEEEEEEEEECCSHHHHCCSCEEEEEEECB-S-----SSCCTTSEEEEEEEEEEEC
T ss_pred EEEEEee-CCCceEEEEEEEEhHHhhCcCCceEEEEEEEc-C-----CCCcceEEEEEEEEEEecc
Confidence 9998875 33456899999999998866543 23334421 1 112 478999999988754
No 101
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=90.72 E-value=2.8 Score=35.78 Aligned_cols=115 Identities=18% Similarity=0.298 Sum_probs=77.7
Q ss_pred CceEEEEEEEeeecCCC-----CCCCCcEEEEE--ECC-eEEEeeeecCCCCCcccceEEEEecCCC------CCCeEEE
Q 009307 416 GGGLLVVIVHEAQDVEG-----KHHTNPYARIL--FRG-EERKTKHVKKNRDPRWEEEFQFMLEEPP------TNDRLHV 481 (538)
Q Consensus 416 ~~g~L~v~v~~a~~L~~-----~~~~dpyv~v~--~~~-~~~kT~v~~~t~nP~w~e~f~f~v~~~~------~~~~l~v 481 (538)
.-+.+.+.|.++. +.+ .+..+|+.-+. +-. +.+.|.++. ..+|.+|-+-.|.+.... ....+.+
T Consensus 16 gEnlfEihi~~~~-~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~l 93 (156)
T 2yrb_A 16 GENLFEIHINKVT-FSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTITL 93 (156)
T ss_dssp SCEEEEEEEEEEC-CCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEEE
T ss_pred CCcEEEEEEeEEE-EcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEEE
Confidence 5678888988886 322 13456644444 434 445666665 889999998888885321 0236889
Q ss_pred EEEEcccCccCCCCCceeEEEEEechhhcccc-eeceEEEeCCCC-----CcEEEEEEEEEe
Q 009307 482 EVCSVSSRIGLLHPKETLGYIDINLSDVVSNK-RINEKYHLIDSK-----NGRIQIELQWRT 537 (538)
Q Consensus 482 ~V~d~~~~~g~~~~d~~lG~~~i~l~~l~~~~-~~~~~~~L~~~~-----~G~I~l~~~w~p 537 (538)
++..... ..-..||.+.|+|.+++++. .+...-+|.+.. -|.++..++++.
T Consensus 94 ELhqa~g-----~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~~g~~~~~G~LeywiRL~~ 150 (156)
T 2yrb_A 94 EVHQAYS-----TEYETIAACQLKFHEILEKSGRIFCTASLIGTKGDIPNFGTVEYWFRLRV 150 (156)
T ss_dssp EEEEECS-----SCEEEEEEEEECCSHHHHCCSCEEEEEEECBSSSCCTTSEEEEEEEEEEE
T ss_pred EEEEeeC-----CCceEEEEEEEEhHHhhCcCCceEEEEEEEcCCCCcceEEEEEEEEEEec
Confidence 8887642 24569999999999999764 355566776542 388888888874
No 102
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=90.03 E-value=3.1 Score=46.88 Aligned_cols=93 Identities=20% Similarity=0.260 Sum_probs=61.8
Q ss_pred eeEEEEEEEeecCCccCCCCCCCCcEEEEEE--cCccCC-eeeeeecCCCCCCeEecEEEEEee---CCCCCEEEEEEEe
Q 009307 259 VGILHVKVVKAMNLKKKDLLGASDPYVKLKI--TEDKLP-SKKTTVKHKNLNPEWNEEYNFTVR---DPESQAVELAVYD 332 (538)
Q Consensus 259 ~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~--~~~~~~-~~~T~v~~~t~nP~w~e~f~f~v~---~~~~~~L~i~v~d 332 (538)
...++|+|.++.++.... ....+-||.+.+ |++... ..+|+. ....+|.|||...|.+. -|....|.++||+
T Consensus 354 ~~~f~v~i~~~~~~n~~~-~~~~~~~V~~~l~hG~~~L~~~~~T~~-~~~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~ 431 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVNI-RDIDKIYVRTGIYHGGEPLCDNVNTQR-VPCSNPRWNEWLNYDIYIPDLPRAARLCLSICS 431 (1091)
T ss_dssp CSEEEEEEEEESCCCCCC-SSCCCCCEEEEEESSSCSSCCEECCCC-CCTTSCEEEEEEEEEEEGGGCCTTCEEEEEECC
T ss_pred CCCEEEEEEEecCCCCCc-cccceEEEEEEEEECCEEccCceeccc-cCCCCCCCCeeEEecCccccCChhcEEEEEEEE
Confidence 357899999999886432 234577888776 444332 223443 33567889999999875 2447899999998
Q ss_pred ccCC----CCCcccEEEEEeCccCC
Q 009307 333 WEQV----GKHDKMGMNVVPLKELT 353 (538)
Q Consensus 333 ~~~~----~~d~~lG~~~i~l~~l~ 353 (538)
.... ..+..+|.+.++|-+..
T Consensus 432 ~~~~~~~~~~~~~lg~~n~~lfd~~ 456 (1091)
T 3hhm_A 432 VKGRKGAKEEHCPLAWGNINLFDYT 456 (1091)
T ss_dssp CCCCC-------CCEEEEEESBCTT
T ss_pred ecCccCcccccceeEEeeeeeEccC
Confidence 6542 12357899888887654
No 103
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=88.49 E-value=2.1 Score=47.83 Aligned_cols=93 Identities=10% Similarity=0.164 Sum_probs=61.0
Q ss_pred CeeEEEEEEEeecCCccCCCCCCCCcEEEEEE--cCccCC-eeeeeecCCCCCCeEecEEEEEee---CCCCCEEEEEEE
Q 009307 258 PVGILHVKVVKAMNLKKKDLLGASDPYVKLKI--TEDKLP-SKKTTVKHKNLNPEWNEEYNFTVR---DPESQAVELAVY 331 (538)
Q Consensus 258 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~--~~~~~~-~~~T~v~~~t~nP~w~e~f~f~v~---~~~~~~L~i~v~ 331 (538)
-...+.|+|.++.++... ..++-||.+.+ |+.... ...|+.+.-..+|.|||...|.+. -|....|.+.||
T Consensus 215 ~~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~ 291 (940)
T 2wxf_A 215 LEQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALY 291 (940)
T ss_dssp CCSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEE
T ss_pred cCCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEE
Confidence 346899999999998754 34677887665 444331 224544445678999999999875 244789999999
Q ss_pred eccCC--C----------CCcccEEEEEeCccCC
Q 009307 332 DWEQV--G----------KHDKMGMNVVPLKELT 353 (538)
Q Consensus 332 d~~~~--~----------~d~~lG~~~i~l~~l~ 353 (538)
+.... + .+..+|.+.+++-+-.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 325 (940)
T 2wxf_A 292 AVVEKAKKARSTKKKSKKADCPIAWANLMLFDYK 325 (940)
T ss_dssp EEC----------------CEEEEEEEEESBCTT
T ss_pred EecCCccCccccccccccccceEEEEeeeEECCc
Confidence 96421 1 2347788887776543
No 104
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=85.70 E-value=2.8 Score=46.82 Aligned_cols=94 Identities=14% Similarity=0.234 Sum_probs=63.3
Q ss_pred ceEEEEEEEeeecCCCCCCCCcEEEEEE--CCe----EEEeeeecCCCCCcccceEEEEe--cCCCCCCeEEEEEEEccc
Q 009307 417 GGLLVVIVHEAQDVEGKHHTNPYARILF--RGE----ERKTKHVKKNRDPRWEEEFQFML--EEPPTNDRLHVEVCSVSS 488 (538)
Q Consensus 417 ~g~L~v~v~~a~~L~~~~~~dpyv~v~~--~~~----~~kT~v~~~t~nP~w~e~f~f~v--~~~~~~~~l~v~V~d~~~ 488 (538)
...+.|+|.++.++......+-||++.+ |++ ...|+.+....+|.|||-.+|.+ .+.|.+..|.++||+...
T Consensus 216 ~~~f~i~i~~~~~~~~~~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~~ 295 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNADERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYAVVE 295 (940)
T ss_dssp CSEEEEEEEEEECCCC---CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEEEC-
T ss_pred CCceEEEEEEecccCCCCCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEEecC
Confidence 4579999999999876555677887765 443 24666666688999999877655 566677899999998521
Q ss_pred C--------ccCCCCCceeEEEEEechhhc
Q 009307 489 R--------IGLLHPKETLGYIDINLSDVV 510 (538)
Q Consensus 489 ~--------~g~~~~d~~lG~~~i~l~~l~ 510 (538)
. .+--..+..+|.++++|-+-.
T Consensus 296 ~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 325 (940)
T 2wxf_A 296 KAKKARSTKKKSKKADCPIAWANLMLFDYK 325 (940)
T ss_dssp ---------------CEEEEEEEEESBCTT
T ss_pred CccCccccccccccccceEEEEeeeEECCc
Confidence 0 000012459999999997643
No 105
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=84.24 E-value=5.7 Score=44.40 Aligned_cols=94 Identities=16% Similarity=0.133 Sum_probs=58.7
Q ss_pred eEEEEEEEeecCCccCCCCCCCCcEEEEEE--cCccCCeeeeeecCCCCCCeEecEEEEEee---CCCCCEEEEEEEecc
Q 009307 260 GILHVKVVKAMNLKKKDLLGASDPYVKLKI--TEDKLPSKKTTVKHKNLNPEWNEEYNFTVR---DPESQAVELAVYDWE 334 (538)
Q Consensus 260 g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~--~~~~~~~~~T~v~~~t~nP~w~e~f~f~v~---~~~~~~L~i~v~d~~ 334 (538)
..++|+|..+....-.+ ...++-||.+.+ |+......+|.-+.-+.+|.|||.+.|.+. -|....|.++||+..
T Consensus 218 ~~f~i~i~~~~~~~~~~-~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLPR-TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp SEEEEEEEEEECSSCCT-TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred CceEEEEeecccccccC-CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 56888888876522111 134577877654 444433334544445667999999998775 244789999999864
Q ss_pred CCC----------------CCcccEEEEEeCccCCC
Q 009307 335 QVG----------------KHDKMGMNVVPLKELTP 354 (538)
Q Consensus 335 ~~~----------------~d~~lG~~~i~l~~l~~ 354 (538)
..+ +...+|.+.++|-+...
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~~ 332 (961)
T 1e7u_A 297 KPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHRF 332 (961)
T ss_dssp C--------------------CEEEEEEEESBCTTS
T ss_pred cCccccccccccccccccccceeEEEEeeeeecCCC
Confidence 321 23478888888766543
No 106
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=74.64 E-value=4.2 Score=46.03 Aligned_cols=74 Identities=18% Similarity=0.223 Sum_probs=51.3
Q ss_pred CeeEEEEEEEeecCCccCCCCCCCCcEEEEE--EcCccCC-eeeeeecCCCCCCeEecEEEEEeeC---CCCCEEEEEEE
Q 009307 258 PVGILHVKVVKAMNLKKKDLLGASDPYVKLK--ITEDKLP-SKKTTVKHKNLNPEWNEEYNFTVRD---PESQAVELAVY 331 (538)
Q Consensus 258 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~--~~~~~~~-~~~T~v~~~t~nP~w~e~f~f~v~~---~~~~~L~i~v~ 331 (538)
-...+.|+|.++.++... ...+-||.+. .|+.... ...|+.+.-+.+|.|||...|.+.- +....|.+.+|
T Consensus 351 ~~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~ 427 (1092)
T 2y3a_A 351 NNNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVY 427 (1092)
T ss_dssp CCSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECC
T ss_pred cCCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEE
Confidence 346899999999998754 3456777644 4554431 2245555557789999999988752 34788999999
Q ss_pred ecc
Q 009307 332 DWE 334 (538)
Q Consensus 332 d~~ 334 (538)
+..
T Consensus 428 ~~~ 430 (1092)
T 2y3a_A 428 AVL 430 (1092)
T ss_dssp CC-
T ss_pred Eec
Confidence 863
No 107
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=73.62 E-value=9 Score=43.20 Aligned_cols=93 Identities=28% Similarity=0.421 Sum_probs=61.1
Q ss_pred ceEEEEEEEeeecCCCC--CCCCcEEEEEE--CCe----EEEeeeecCCCCCcccceEEEEe--cCCCCCCeEEEEEEEc
Q 009307 417 GGLLVVIVHEAQDVEGK--HHTNPYARILF--RGE----ERKTKHVKKNRDPRWEEEFQFML--EEPPTNDRLHVEVCSV 486 (538)
Q Consensus 417 ~g~L~v~v~~a~~L~~~--~~~dpyv~v~~--~~~----~~kT~v~~~t~nP~w~e~f~f~v--~~~~~~~~l~v~V~d~ 486 (538)
...++|+|.++.++... ...+-||++.+ |++ ..+|+.+. ..+|.|||-.+|.+ .+.|....|.++||+.
T Consensus 354 ~~~f~v~i~~~~~~n~~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~~ 432 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVNIRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSICSV 432 (1091)
T ss_dssp CSEEEEEEEEESCCCCCCSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEECCC
T ss_pred CCCEEEEEEEecCCCCCccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEEEe
Confidence 45789999999877542 34677888877 333 23454443 56788999866665 5666778999999986
Q ss_pred ccCccCCCCCceeEEEEEechhhc
Q 009307 487 SSRIGLLHPKETLGYIDINLSDVV 510 (538)
Q Consensus 487 ~~~~g~~~~d~~lG~~~i~l~~l~ 510 (538)
....+--.....||.++++|-+-.
T Consensus 433 ~~~~~~~~~~~~lg~~n~~lfd~~ 456 (1091)
T 3hhm_A 433 KGRKGAKEEHCPLAWGNINLFDYT 456 (1091)
T ss_dssp CCCC-------CCEEEEEESBCTT
T ss_pred cCccCcccccceeEEeeeeeEccC
Confidence 531110012458999999997753
No 108
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=73.21 E-value=13 Score=41.62 Aligned_cols=94 Identities=12% Similarity=0.142 Sum_probs=58.9
Q ss_pred ceEEEEEEEeeec--CCCCCCCCcEEEEEE--CCeE---EEeeeecCCCCCcccceEEEEe--cCCCCCCeEEEEEEEcc
Q 009307 417 GGLLVVIVHEAQD--VEGKHHTNPYARILF--RGEE---RKTKHVKKNRDPRWEEEFQFML--EEPPTNDRLHVEVCSVS 487 (538)
Q Consensus 417 ~g~L~v~v~~a~~--L~~~~~~dpyv~v~~--~~~~---~kT~v~~~t~nP~w~e~f~f~v--~~~~~~~~l~v~V~d~~ 487 (538)
...++|.|.++.. ++.+...+-||++.+ |++. .+|..+.-+.+|.|||-++|.+ .+.|.+..|.++||+..
T Consensus 217 ~~~f~i~i~~~~~~~~~~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 217 DRKFRVKIRGIDIPVLPRTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp CSEEEEEEEEEECSSCCTTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred cCceEEEEeecccccccCCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 4467888888764 233334566777654 5543 2555555677899999866655 56667789999999754
Q ss_pred cCcc------------CCCCCceeEEEEEechhhc
Q 009307 488 SRIG------------LLHPKETLGYIDINLSDVV 510 (538)
Q Consensus 488 ~~~g------------~~~~d~~lG~~~i~l~~l~ 510 (538)
...+ --+....+|.++++|-+-.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~ 331 (961)
T 1e7u_A 297 KPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHR 331 (961)
T ss_dssp C--------------------CEEEEEEEESBCTT
T ss_pred cCccccccccccccccccccceeEEEEeeeeecCC
Confidence 2100 0012458999999987654
No 109
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=70.73 E-value=4.5 Score=45.74 Aligned_cols=94 Identities=13% Similarity=0.194 Sum_probs=61.7
Q ss_pred ceEEEEEEEeeecCCCCCCCCcEEEEEE--CCeE----EEeeeecCCCCCcccceEEEEe--cCCCCCCeEEEEEEEccc
Q 009307 417 GGLLVVIVHEAQDVEGKHHTNPYARILF--RGEE----RKTKHVKKNRDPRWEEEFQFML--EEPPTNDRLHVEVCSVSS 488 (538)
Q Consensus 417 ~g~L~v~v~~a~~L~~~~~~dpyv~v~~--~~~~----~kT~v~~~t~nP~w~e~f~f~v--~~~~~~~~l~v~V~d~~~ 488 (538)
...++|+|.++.++......+-||++.+ |++. ..|+.+....+|.|||-++|.+ .+.|.+..|.++||+...
T Consensus 352 ~~~f~i~i~~~~~~~~~~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~~~~ 431 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTEETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYAVLD 431 (1092)
T ss_dssp CSEEEEEECCCCCCCCCSSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCCC--
T ss_pred CCCEEEEEEEeccCCCCCCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEEecC
Confidence 4689999999999876656777777544 5543 3566666678899999866655 455667799999998521
Q ss_pred C-ccC-----------------CCCCceeEEEEEechhhc
Q 009307 489 R-IGL-----------------LHPKETLGYIDINLSDVV 510 (538)
Q Consensus 489 ~-~g~-----------------~~~d~~lG~~~i~l~~l~ 510 (538)
. .|- -.....+|.++++|-+-.
T Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 471 (1092)
T 2y3a_A 432 KVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDFK 471 (1092)
T ss_dssp ----------------------------CCEEEEESBCTT
T ss_pred ccccccccccccccccccccccccccceeEEEeeeeECCc
Confidence 0 000 011348999999987643
No 110
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=63.43 E-value=28 Score=31.43 Aligned_cols=62 Identities=16% Similarity=0.176 Sum_probs=42.3
Q ss_pred eEEEeeeecCCCCCcccceEEEEecCCCC-CCeEEEEEEEcccCccCCCCCceeEEEEEechh
Q 009307 447 EERKTKHVKKNRDPRWEEEFQFMLEEPPT-NDRLHVEVCSVSSRIGLLHPKETLGYIDINLSD 508 (538)
Q Consensus 447 ~~~kT~v~~~t~nP~w~e~f~f~v~~~~~-~~~l~v~V~d~~~~~g~~~~d~~lG~~~i~l~~ 508 (538)
...+|.+..++.+|.|+|++.+.++.... ...|.++++.......--..+..+|.+-++|-+
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~ 139 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMR 139 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBC
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEccc
Confidence 34588999999999999999999976422 236888887543210000123578999999853
No 111
>1ewf_A BPI, bactericidal/permeability-increasing protein; lipid-binding, lipopolysaccharide-binding, antibiotic; HET: PC1; 1.70A {Homo sapiens} SCOP: d.83.1.1 d.83.1.1 PDB: 1bp1_A*
Probab=35.42 E-value=3.5e+02 Score=26.94 Aligned_cols=20 Identities=5% Similarity=0.155 Sum_probs=15.3
Q ss_pred eeEEEEEeEEEEEEEEEEEe
Q 009307 164 KATVQVVDLQVFAQPRITLK 183 (538)
Q Consensus 164 ~~~v~v~~~~~~g~~rv~l~ 183 (538)
.+.+.++++.+.+.+|+...
T Consensus 103 ~~~~~v~~v~i~~~~~l~~~ 122 (456)
T 1ewf_A 103 NFDLSIEGMSISADLKLGSN 122 (456)
T ss_dssp EEEEEEEEEEEEEEEEEEEE
T ss_pred EEEEEEeeEEEEEEEEEeec
Confidence 56667778888888888775
Done!