Query 009308
Match_columns 538
No_of_seqs 216 out of 1671
Neff 8.1
Searched_HMMs 46136
Date Thu Mar 28 22:58:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009308.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009308hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1237 H+/oligopeptide sympor 100.0 1.2E-63 2.6E-68 540.7 33.9 461 36-515 37-569 (571)
2 COG3104 PTR2 Dipeptide/tripept 100.0 2E-52 4.4E-57 432.8 29.0 422 33-511 18-492 (498)
3 TIGR00926 2A1704 Peptide:H+ sy 100.0 3.5E-42 7.5E-47 379.7 35.4 403 50-509 1-654 (654)
4 PRK10207 dipeptide/tripeptide 100.0 8.3E-41 1.8E-45 361.3 38.7 419 33-515 11-485 (489)
5 PRK15462 dipeptide/tripeptide 100.0 8.2E-40 1.8E-44 349.9 40.1 421 33-516 6-489 (493)
6 TIGR00924 yjdL_sub1_fam amino 100.0 2.9E-39 6.3E-44 348.6 39.0 410 33-510 7-472 (475)
7 PRK09584 tppB putative tripept 100.0 4.6E-37 1E-41 333.4 37.6 417 33-512 18-485 (500)
8 PF00854 PTR2: POT family; In 100.0 2.6E-31 5.5E-36 278.2 12.7 325 104-459 1-371 (372)
9 PRK11646 multidrug resistance 99.8 2.9E-18 6.4E-23 181.2 29.7 165 34-221 10-180 (400)
10 PRK10054 putative transporter; 99.8 3.4E-18 7.4E-23 180.5 29.5 167 33-220 4-176 (395)
11 PRK05122 major facilitator sup 99.8 3.1E-17 6.7E-22 172.8 34.3 168 36-216 15-189 (399)
12 PRK12382 putative transporter; 99.8 5.3E-17 1.2E-21 170.7 32.8 167 35-214 14-187 (392)
13 PRK03545 putative arabinose tr 99.8 1.7E-16 3.6E-21 166.9 34.5 162 37-220 10-178 (390)
14 PRK11551 putative 3-hydroxyphe 99.8 3.7E-16 8E-21 164.8 31.5 162 37-220 16-184 (406)
15 PRK10489 enterobactin exporter 99.8 2.9E-16 6.3E-21 166.6 30.8 169 36-221 17-192 (417)
16 TIGR00900 2A0121 H+ Antiporter 99.8 3E-16 6.4E-21 161.7 29.0 165 40-221 3-174 (365)
17 PRK10504 putative transporter; 99.8 1.6E-15 3.5E-20 163.4 34.2 166 36-223 10-182 (471)
18 PRK15402 multidrug efflux syst 99.8 2.4E-15 5.2E-20 159.0 33.6 156 44-221 21-183 (406)
19 PRK09874 drug efflux system pr 99.7 8.3E-16 1.8E-20 162.0 29.2 163 36-221 14-188 (408)
20 cd06174 MFS The Major Facilita 99.7 1.1E-15 2.5E-20 156.0 28.7 337 40-503 3-349 (352)
21 PF07690 MFS_1: Major Facilita 99.7 3.8E-16 8.2E-21 160.3 24.0 159 42-221 2-167 (352)
22 PRK03633 putative MFS family t 99.7 2.5E-15 5.3E-20 157.6 29.9 147 33-201 3-149 (381)
23 TIGR00892 2A0113 monocarboxyla 99.7 7.6E-16 1.7E-20 165.6 25.9 140 60-221 42-189 (455)
24 TIGR00893 2A0114 d-galactonate 99.7 3.9E-15 8.5E-20 154.4 27.5 143 58-221 15-164 (399)
25 TIGR00890 2A0111 Oxalate/Forma 99.7 2.6E-15 5.6E-20 155.2 25.3 144 56-221 22-172 (377)
26 TIGR00899 2A0120 sugar efflux 99.7 1.5E-14 3.3E-19 150.3 30.5 160 43-221 4-171 (375)
27 TIGR01299 synapt_SV2 synaptic 99.7 1.7E-14 3.7E-19 162.0 32.8 155 55-230 185-361 (742)
28 PRK14995 methyl viologen resis 99.7 1.4E-14 2.9E-19 157.6 30.9 162 39-221 9-177 (495)
29 PRK09528 lacY galactoside perm 99.7 1E-14 2.2E-19 155.1 29.2 173 36-223 10-188 (420)
30 PRK11663 regulatory protein Uh 99.7 2.1E-14 4.6E-19 153.4 30.9 154 43-218 30-190 (434)
31 PRK09705 cynX putative cyanate 99.7 2.2E-14 4.8E-19 151.3 30.6 153 44-219 17-177 (393)
32 PRK12307 putative sialic acid 99.7 2.4E-14 5.1E-19 152.1 30.9 156 38-215 20-182 (426)
33 TIGR00891 2A0112 putative sial 99.7 1.6E-14 3.6E-19 151.2 28.9 162 36-219 12-182 (405)
34 PRK11195 lysophospholipid tran 99.7 4.8E-14 1E-18 148.8 32.2 156 36-216 3-164 (393)
35 TIGR00711 efflux_EmrB drug res 99.7 1.2E-14 2.6E-19 156.8 28.0 161 39-221 5-172 (485)
36 PLN00028 nitrate transmembrane 99.7 2.6E-14 5.7E-19 154.6 30.6 162 36-220 36-213 (476)
37 PRK03893 putative sialic acid 99.7 3.8E-14 8.3E-19 153.6 31.4 159 36-216 20-185 (496)
38 PRK15403 multidrug efflux syst 99.7 1.3E-13 2.7E-18 146.6 34.2 138 63-221 42-186 (413)
39 TIGR00710 efflux_Bcr_CflA drug 99.7 1.4E-13 3E-18 143.5 33.7 162 39-222 8-176 (385)
40 TIGR00895 2A0115 benzoate tran 99.7 6.5E-14 1.4E-18 146.0 30.8 158 38-217 19-183 (398)
41 PRK10213 nepI ribonucleoside t 99.7 1.8E-13 3.8E-18 144.5 34.0 147 51-219 35-188 (394)
42 PRK10091 MFS transport protein 99.7 1.1E-13 2.3E-18 145.3 32.1 164 35-220 2-172 (382)
43 PRK10642 proline/glycine betai 99.7 1.3E-13 2.9E-18 149.7 33.5 168 36-217 16-204 (490)
44 TIGR00903 2A0129 major facilit 99.7 3.4E-14 7.4E-19 148.6 27.8 143 56-220 10-159 (368)
45 TIGR00879 SP MFS transporter, 99.7 4.3E-14 9.3E-19 150.7 28.6 134 70-220 68-211 (481)
46 TIGR00882 2A0105 oligosacchari 99.7 1E-13 2.2E-18 146.0 30.9 170 36-220 2-177 (396)
47 PRK11652 emrD multidrug resist 99.7 3.2E-13 6.8E-18 142.1 33.5 161 36-218 8-175 (394)
48 PRK10406 alpha-ketoglutarate t 99.7 2.1E-13 4.7E-18 145.5 32.5 161 44-218 30-211 (432)
49 TIGR00897 2A0118 polyol permea 99.6 3.4E-13 7.4E-18 142.5 32.9 151 33-201 10-161 (402)
50 TIGR00898 2A0119 cation transp 99.6 7.5E-14 1.6E-18 151.8 28.3 140 61-221 113-259 (505)
51 PRK10077 xylE D-xylose transpo 99.6 1E-13 2.2E-18 149.5 29.1 142 66-220 49-209 (479)
52 PRK11043 putative transporter; 99.6 2.8E-13 6E-18 142.9 31.1 138 63-221 32-176 (401)
53 PRK09556 uhpT sugar phosphate 99.6 2.9E-13 6.2E-18 146.1 31.7 144 59-218 51-204 (467)
54 PRK11102 bicyclomycin/multidru 99.6 7.1E-13 1.5E-17 138.2 32.2 146 54-221 9-161 (377)
55 PF05977 MFS_3: Transmembrane 99.6 9.7E-13 2.1E-17 143.1 34.2 171 36-223 10-187 (524)
56 TIGR00881 2A0104 phosphoglycer 99.6 1.1E-13 2.3E-18 143.3 25.3 143 58-221 16-166 (379)
57 PRK03699 putative transporter; 99.6 9.2E-13 2E-17 138.8 32.6 163 36-220 7-177 (394)
58 PRK10473 multidrug efflux syst 99.6 1.4E-12 3E-17 137.1 33.8 155 44-220 11-172 (392)
59 PRK15011 sugar efflux transpor 99.6 6.6E-13 1.4E-17 139.9 31.3 165 36-221 15-189 (393)
60 COG2814 AraJ Arabinose efflux 99.6 1.9E-12 4.2E-17 133.9 33.8 170 36-227 13-189 (394)
61 TIGR00902 2A0127 phenyl propri 99.6 1.1E-12 2.4E-17 137.8 32.6 150 40-215 8-168 (382)
62 TIGR00889 2A0110 nucleoside tr 99.6 2E-12 4.3E-17 137.7 34.4 108 44-160 10-117 (418)
63 TIGR02332 HpaX 4-hydroxyphenyl 99.6 9.2E-13 2E-17 139.9 31.6 142 58-220 29-183 (412)
64 PRK11273 glpT sn-glycerol-3-ph 99.6 9.3E-13 2E-17 141.5 32.0 143 58-218 50-200 (452)
65 PRK09952 shikimate transporter 99.6 1.9E-12 4.1E-17 138.6 33.3 120 86-217 77-211 (438)
66 KOG2532 Permease of the major 99.6 6.6E-14 1.4E-18 149.8 21.3 140 66-224 67-214 (466)
67 PRK08633 2-acyl-glycerophospho 99.6 1.2E-12 2.5E-17 156.3 34.2 148 36-201 9-158 (1146)
68 TIGR00894 2A0114euk Na(+)-depe 99.6 4.3E-13 9.2E-18 144.5 27.2 138 66-222 70-215 (465)
69 PRK10133 L-fucose transporter; 99.6 1.3E-12 2.9E-17 139.8 30.7 113 46-166 36-148 (438)
70 PRK15075 citrate-proton sympor 99.6 1.2E-12 2.6E-17 139.9 29.9 156 41-213 23-199 (434)
71 TIGR00792 gph sugar (Glycoside 99.6 7.9E-13 1.7E-17 140.8 27.4 164 45-221 8-189 (437)
72 TIGR00887 2A0109 phosphate:H+ 99.6 3.1E-12 6.7E-17 139.4 32.6 149 69-231 52-232 (502)
73 PRK06814 acylglycerophosphoeth 99.6 1.7E-12 3.7E-17 155.0 32.2 129 73-220 52-189 (1140)
74 KOG1330 Sugar transporter/spin 99.6 3.1E-14 6.7E-19 147.1 13.9 168 34-223 31-207 (493)
75 PRK11128 putative 3-phenylprop 99.5 8E-12 1.7E-16 131.1 31.3 148 46-219 14-172 (382)
76 PRK11010 ampG muropeptide tran 99.5 2.1E-11 4.6E-16 132.5 34.1 164 38-221 14-190 (491)
77 TIGR00896 CynX cyanate transpo 99.5 1.8E-12 3.8E-17 134.5 24.1 145 51-218 14-167 (355)
78 TIGR00712 glpT glycerol-3-phos 99.5 5.2E-12 1.1E-16 135.1 26.7 145 58-220 48-200 (438)
79 TIGR00883 2A0106 metabolite-pr 99.5 4.1E-12 8.9E-17 132.1 25.2 161 44-220 4-185 (394)
80 TIGR00901 2A0125 AmpG-related 99.5 7.3E-12 1.6E-16 129.8 25.2 148 55-221 6-173 (356)
81 PRK09848 glucuronide transport 99.5 1.1E-11 2.5E-16 132.9 27.2 149 44-201 16-170 (448)
82 COG2271 UhpC Sugar phosphate p 99.5 3.5E-11 7.6E-16 123.5 28.9 163 42-225 31-206 (448)
83 TIGR01301 GPH_sucrose GPH fami 99.5 1.1E-10 2.3E-15 125.4 33.9 175 39-224 7-216 (477)
84 TIGR00885 fucP L-fucose:H+ sym 99.5 1.4E-11 3.1E-16 130.7 27.2 130 54-201 20-149 (410)
85 TIGR00886 2A0108 nitrite extru 99.5 4.9E-12 1.1E-16 131.1 23.0 143 37-200 2-144 (366)
86 PRK09669 putative symporter Ya 99.4 1.1E-10 2.4E-15 125.1 27.0 162 44-218 17-196 (444)
87 PRK11902 ampG muropeptide tran 99.4 7.2E-10 1.6E-14 117.2 32.3 150 51-220 14-176 (402)
88 PRK10429 melibiose:sodium symp 99.4 2E-10 4.4E-15 124.2 28.3 142 44-198 14-159 (473)
89 PRK15034 nitrate/nitrite trans 99.4 7.6E-10 1.7E-14 118.1 31.2 145 36-198 34-179 (462)
90 KOG0569 Permease of the major 99.4 2.5E-10 5.3E-15 121.7 25.7 140 76-232 63-213 (485)
91 TIGR00788 fbt folate/biopterin 99.3 1.1E-09 2.4E-14 118.3 30.1 162 39-220 29-203 (468)
92 KOG0254 Predicted transporter 99.3 8.8E-10 1.9E-14 120.5 27.2 166 47-232 54-238 (513)
93 PF03825 Nuc_H_symport: Nucleo 99.2 2.1E-08 4.6E-13 106.0 32.3 112 44-165 10-121 (400)
94 PF13347 MFS_2: MFS/sugar tran 99.2 1.2E-09 2.6E-14 116.5 22.1 167 46-225 11-197 (428)
95 TIGR00806 rfc RFC reduced fola 99.2 4.2E-09 9.1E-14 111.3 24.0 145 57-223 46-200 (511)
96 KOG3764 Vesicular amine transp 99.2 2.4E-09 5.2E-14 109.1 20.2 139 66-224 100-245 (464)
97 KOG2615 Permease of the major 99.2 1.8E-08 3.9E-13 102.2 26.2 112 69-201 64-175 (451)
98 KOG0252 Inorganic phosphate tr 99.2 8.4E-10 1.8E-14 114.2 16.8 138 69-216 80-236 (538)
99 PF01306 LacY_symp: LacY proto 99.1 8.9E-09 1.9E-13 107.8 23.3 75 36-112 7-81 (412)
100 COG2223 NarK Nitrate/nitrite t 99.1 4.9E-08 1.1E-12 100.6 27.6 170 36-226 14-193 (417)
101 KOG0255 Synaptic vesicle trans 99.1 2.9E-08 6.3E-13 108.7 27.9 146 65-232 111-263 (521)
102 KOG2504 Monocarboxylate transp 99.1 1.2E-08 2.5E-13 110.8 23.6 160 39-220 45-215 (509)
103 TIGR00805 oat sodium-independe 99.1 2.9E-10 6.2E-15 127.1 10.3 176 33-221 29-276 (633)
104 COG0738 FucP Fucose permease [ 99.1 5.1E-08 1.1E-12 100.0 25.4 130 54-201 30-159 (422)
105 TIGR02718 sider_RhtX_FptX side 99.1 3E-07 6.6E-12 96.6 32.5 165 39-221 4-179 (390)
106 PRK11462 putative transporter; 99.1 1.3E-07 2.9E-12 102.0 28.9 145 44-201 17-165 (460)
107 TIGR00899 2A0120 sugar efflux 99.0 1.4E-08 3E-13 105.4 16.6 160 42-223 205-371 (375)
108 PRK15011 sugar efflux transpor 99.0 2.2E-08 4.7E-13 105.6 18.1 156 46-223 226-388 (393)
109 TIGR00890 2A0111 Oxalate/Forma 99.0 1.3E-08 2.9E-13 105.0 15.5 163 37-219 206-375 (377)
110 PF06609 TRI12: Fungal trichot 98.9 5.1E-07 1.1E-11 98.9 28.1 142 57-221 64-212 (599)
111 cd06174 MFS The Major Facilita 98.9 2.2E-08 4.8E-13 102.0 16.1 166 36-222 175-348 (352)
112 PF00083 Sugar_tr: Sugar (and 98.9 2.1E-12 4.6E-17 138.2 -14.4 145 72-233 45-201 (451)
113 COG2807 CynX Cyanate permease 98.9 8.9E-07 1.9E-11 89.8 25.6 153 49-225 25-185 (395)
114 TIGR00883 2A0106 metabolite-pr 98.9 4.8E-08 1E-12 101.5 17.4 159 36-212 219-387 (394)
115 PRK05122 major facilitator sup 98.9 4.3E-08 9.3E-13 103.2 17.0 154 47-224 227-387 (399)
116 PRK03699 putative transporter; 98.9 3.3E-08 7.2E-13 104.2 16.0 163 36-220 205-374 (394)
117 PRK10642 proline/glycine betai 98.9 6.4E-08 1.4E-12 105.2 18.3 118 41-166 255-373 (490)
118 PTZ00207 hypothetical protein; 98.8 5.7E-08 1.2E-12 106.7 16.1 142 58-216 48-195 (591)
119 KOG2533 Permease of the major 98.8 4.8E-07 1E-11 97.7 22.8 135 65-220 74-221 (495)
120 PRK09952 shikimate transporter 98.8 1.3E-07 2.9E-12 101.2 18.3 173 34-223 248-430 (438)
121 PRK09874 drug efflux system pr 98.8 1.3E-07 2.9E-12 99.5 17.5 158 45-223 228-395 (408)
122 TIGR00880 2_A_01_02 Multidrug 98.8 2E-08 4.3E-13 88.1 8.7 122 81-222 6-134 (141)
123 PRK03545 putative arabinose tr 98.8 1.9E-07 4E-12 98.2 17.5 165 38-224 207-378 (390)
124 TIGR01299 synapt_SV2 synaptic 98.8 1.3E-07 2.7E-12 107.0 16.9 123 79-221 601-729 (742)
125 PRK10489 enterobactin exporter 98.8 2.1E-07 4.5E-12 98.8 17.3 145 52-217 239-390 (417)
126 PRK09556 uhpT sugar phosphate 98.8 2.1E-07 4.5E-12 100.6 17.0 169 36-223 258-446 (467)
127 PRK03633 putative MFS family t 98.8 2.2E-07 4.8E-12 97.4 16.6 151 48-223 212-369 (381)
128 PRK12382 putative transporter; 98.7 2.7E-07 5.9E-12 96.9 16.4 151 49-223 229-386 (392)
129 PRK09705 cynX putative cyanate 98.7 3.2E-07 7E-12 96.7 16.9 166 36-223 205-378 (393)
130 TIGR00892 2A0113 monocarboxyla 98.7 1.7E-07 3.7E-12 100.9 14.9 167 36-223 241-418 (455)
131 COG2211 MelB Na+/melibiose sym 98.7 1.4E-05 3E-10 85.0 28.4 145 44-201 20-168 (467)
132 TIGR00889 2A0110 nucleoside tr 98.7 2.1E-07 4.6E-12 99.1 14.3 167 39-223 211-399 (418)
133 PRK11551 putative 3-hydroxyphe 98.7 5.4E-07 1.2E-11 95.0 17.2 154 45-220 229-390 (406)
134 TIGR00893 2A0114 d-galactonate 98.7 3.7E-07 8.1E-12 94.4 15.4 172 36-222 215-395 (399)
135 TIGR00902 2A0127 phenyl propri 98.7 7.7E-07 1.7E-11 93.4 17.5 162 36-221 205-374 (382)
136 PF11700 ATG22: Vacuole efflux 98.7 7.1E-07 1.5E-11 96.4 17.3 192 11-223 263-465 (477)
137 PF03209 PUCC: PUCC protein; 98.7 4.8E-05 1E-09 78.9 29.6 359 65-505 8-397 (403)
138 COG2814 AraJ Arabinose efflux 98.7 5.4E-07 1.2E-11 93.7 15.4 172 36-226 211-386 (394)
139 PLN00028 nitrate transmembrane 98.7 4.9E-07 1.1E-11 98.0 15.8 166 38-225 254-432 (476)
140 TIGR00897 2A0118 polyol permea 98.7 1E-06 2.3E-11 93.1 18.0 168 36-222 222-397 (402)
141 PRK09528 lacY galactoside perm 98.6 4.9E-07 1.1E-11 96.1 15.3 152 50-222 237-399 (420)
142 TIGR00792 gph sugar (Glycoside 98.6 6.1E-07 1.3E-11 95.5 15.9 152 35-201 221-373 (437)
143 PRK03893 putative sialic acid 98.6 7.4E-07 1.6E-11 96.6 16.7 140 54-212 293-439 (496)
144 PRK11273 glpT sn-glycerol-3-ph 98.6 1E-06 2.2E-11 94.8 16.4 168 36-221 253-430 (452)
145 TIGR00891 2A0112 putative sial 98.6 6.5E-07 1.4E-11 93.6 14.3 136 46-201 248-383 (405)
146 COG2271 UhpC Sugar phosphate p 98.6 1.2E-06 2.5E-11 90.7 15.3 170 36-223 252-431 (448)
147 KOG0253 Synaptic vesicle trans 98.6 1.5E-05 3.3E-10 80.9 22.6 171 43-232 84-259 (528)
148 PRK10504 putative transporter; 98.6 3.2E-06 6.9E-11 91.2 19.1 148 36-201 261-408 (471)
149 PRK11010 ampG muropeptide tran 98.6 1.8E-06 3.9E-11 94.0 17.1 172 38-226 224-403 (491)
150 PF11700 ATG22: Vacuole efflux 98.6 0.00012 2.5E-09 79.4 30.7 77 419-502 387-464 (477)
151 TIGR00900 2A0121 H+ Antiporter 98.5 1.1E-06 2.4E-11 90.4 13.7 149 36-204 210-359 (365)
152 PRK11663 regulatory protein Uh 98.5 2E-06 4.3E-11 92.0 16.1 170 36-223 243-421 (434)
153 PRK10406 alpha-ketoglutarate t 98.5 5.1E-06 1.1E-10 88.7 19.1 162 42-221 249-419 (432)
154 TIGR00879 SP MFS transporter, 98.5 1.6E-06 3.6E-11 92.3 15.2 148 61-222 308-466 (481)
155 PRK15402 multidrug efflux syst 98.5 4.5E-06 9.7E-11 88.2 18.2 148 37-201 216-363 (406)
156 PF13347 MFS_2: MFS/sugar tran 98.5 1.4E-06 3E-11 93.0 14.2 154 35-201 224-377 (428)
157 PRK14995 methyl viologen resis 98.5 1.5E-06 3.2E-11 94.7 14.5 149 38-204 261-409 (495)
158 PRK10091 MFS transport protein 98.5 3.1E-06 6.8E-11 88.8 16.2 164 38-222 201-372 (382)
159 COG2223 NarK Nitrate/nitrite t 98.5 1.7E-06 3.7E-11 89.5 13.4 175 35-224 217-399 (417)
160 TIGR00711 efflux_EmrB drug res 98.5 1.6E-06 3.5E-11 93.4 14.1 149 38-203 257-405 (485)
161 PRK15075 citrate-proton sympor 98.5 7.6E-06 1.6E-10 87.5 19.1 116 43-166 245-362 (434)
162 PRK10077 xylE D-xylose transpo 98.5 5.8E-06 1.2E-10 89.2 18.3 142 62-220 296-451 (479)
163 TIGR00895 2A0115 benzoate tran 98.5 2E-06 4.3E-11 89.5 14.2 146 37-204 251-396 (398)
164 TIGR00901 2A0125 AmpG-related 98.5 1.3E-06 2.9E-11 90.3 12.8 126 38-166 211-340 (356)
165 PRK08633 2-acyl-glycerophospho 98.5 3.4E-06 7.3E-11 101.1 17.6 144 37-201 233-377 (1146)
166 PRK09848 glucuronide transport 98.5 3.3E-06 7.1E-11 90.7 15.5 154 36-201 228-381 (448)
167 PRK11128 putative 3-phenylprop 98.4 6.7E-06 1.5E-10 86.2 16.9 117 36-163 205-321 (382)
168 TIGR00712 glpT glycerol-3-phos 98.4 4.8E-06 1E-10 89.2 15.7 169 36-223 251-430 (438)
169 TIGR01272 gluP glucose/galacto 98.4 6.6E-06 1.4E-10 84.1 15.9 154 38-215 142-304 (310)
170 TIGR00710 efflux_Bcr_CflA drug 98.4 1E-05 2.3E-10 84.1 17.3 123 38-165 208-330 (385)
171 PF03092 BT1: BT1 family; Int 98.4 0.00049 1.1E-08 73.8 30.3 149 58-221 11-170 (433)
172 PRK10133 L-fucose transporter; 98.4 9.5E-06 2.1E-10 87.0 17.0 115 41-166 263-378 (438)
173 PF07690 MFS_1: Major Facilita 98.4 2E-06 4.4E-11 88.0 11.3 143 39-199 209-352 (352)
174 TIGR02332 HpaX 4-hydroxyphenyl 98.4 4.5E-06 9.9E-11 88.7 14.1 158 36-214 242-409 (412)
175 PRK10213 nepI ribonucleoside t 98.3 1.9E-05 4E-10 83.5 17.7 158 36-216 216-381 (394)
176 COG2270 Permeases of the major 98.3 7.9E-06 1.7E-10 84.7 14.2 182 13-222 236-425 (438)
177 PRK06814 acylglycerophosphoeth 98.3 9.3E-06 2E-10 97.4 17.2 153 36-201 225-389 (1140)
178 TIGR02718 sider_RhtX_FptX side 98.3 1.5E-05 3.3E-10 83.7 16.5 168 38-220 210-385 (390)
179 TIGR00882 2A0105 oligosacchari 98.3 2E-05 4.4E-10 82.9 17.4 165 36-220 215-389 (396)
180 KOG4686 Predicted sugar transp 98.3 1E-05 2.2E-10 79.4 13.3 147 32-201 260-407 (459)
181 KOG2325 Predicted transporter/ 98.3 2.2E-05 4.7E-10 83.8 16.9 161 16-201 22-184 (488)
182 TIGR00881 2A0104 phosphoglycer 98.3 4.8E-06 1E-10 85.9 11.9 148 36-201 216-365 (379)
183 PF05977 MFS_3: Transmembrane 98.3 1.7E-05 3.7E-10 86.7 16.4 160 43-223 225-391 (524)
184 TIGR00894 2A0114euk Na(+)-depe 98.3 1.9E-05 4.1E-10 85.1 16.5 169 36-223 261-447 (465)
185 TIGR00896 CynX cyanate transpo 98.3 1.2E-05 2.7E-10 83.1 14.5 145 36-201 197-341 (355)
186 PRK10054 putative transporter; 98.3 1.9E-05 4E-10 83.5 15.6 164 36-220 206-378 (395)
187 KOG2563 Permease of the major 98.3 7.9E-05 1.7E-09 77.9 19.4 107 57-166 65-171 (480)
188 PRK11102 bicyclomycin/multidru 98.2 3.7E-05 8.1E-10 80.0 17.3 117 43-165 201-317 (377)
189 PRK11902 ampG muropeptide tran 98.2 2.6E-05 5.6E-10 82.4 16.2 165 38-223 211-387 (402)
190 KOG4686 Predicted sugar transp 98.2 4.8E-06 1E-10 81.6 9.2 126 57-199 64-189 (459)
191 PRK12307 putative sialic acid 98.2 5.2E-05 1.1E-09 80.4 17.8 128 52-201 247-376 (426)
192 PRK11195 lysophospholipid tran 98.2 4.3E-05 9.3E-10 80.7 17.0 150 49-219 218-373 (393)
193 PRK10429 melibiose:sodium symp 98.2 3.2E-05 6.8E-10 83.8 16.3 156 36-201 231-386 (473)
194 PRK11646 multidrug resistance 98.2 4.1E-05 8.9E-10 81.0 16.1 126 55-201 227-352 (400)
195 PRK09669 putative symporter Ya 98.2 5E-05 1.1E-09 81.5 16.4 153 36-201 229-381 (444)
196 COG2807 CynX Cyanate permease 98.2 3.4E-05 7.3E-10 78.5 13.9 158 35-210 207-369 (395)
197 PF05631 DUF791: Protein of un 98.1 4.8E-05 1E-09 77.7 14.4 152 55-223 52-213 (354)
198 PRK15034 nitrate/nitrite trans 98.1 5.2E-05 1.1E-09 81.3 15.0 123 37-165 253-375 (462)
199 PRK10473 multidrug efflux syst 98.1 0.00021 4.5E-09 75.0 18.5 67 57-125 224-290 (392)
200 TIGR00886 2A0108 nitrite extru 98.1 2E-05 4.4E-10 81.4 10.5 122 38-165 227-348 (366)
201 COG2270 Permeases of the major 98.1 0.00055 1.2E-08 71.3 20.5 105 56-166 35-146 (438)
202 KOG3626 Organic anion transpor 98.0 0.00033 7.1E-09 78.0 19.7 188 23-224 84-341 (735)
203 KOG2816 Predicted transporter 98.0 0.0011 2.4E-08 71.3 21.7 158 39-222 21-195 (463)
204 TIGR00898 2A0119 cation transp 97.9 0.00032 6.9E-09 76.3 17.4 122 81-220 363-489 (505)
205 TIGR00887 2A0109 phosphate:H+ 97.9 0.00017 3.7E-09 78.7 15.2 139 45-201 297-447 (502)
206 PRK11043 putative transporter; 97.9 0.00052 1.1E-08 72.2 18.3 134 50-201 217-350 (401)
207 KOG2504 Monocarboxylate transp 97.9 0.00011 2.4E-09 80.1 13.0 169 36-226 298-476 (509)
208 COG2211 MelB Na+/melibiose sym 97.9 0.00021 4.6E-09 76.1 14.2 155 35-201 235-389 (467)
209 TIGR00885 fucP L-fucose:H+ sym 97.9 0.00032 6.9E-09 74.6 15.8 153 41-217 237-403 (410)
210 PF03209 PUCC: PUCC protein; 97.9 0.00041 8.8E-09 72.2 15.8 157 50-223 222-395 (403)
211 TIGR00903 2A0129 major facilit 97.9 0.00067 1.5E-08 71.0 17.8 159 36-220 192-359 (368)
212 PRK11462 putative transporter; 97.9 0.00055 1.2E-08 73.9 17.4 153 36-201 228-380 (460)
213 TIGR01272 gluP glucose/galacto 97.8 0.0029 6.2E-08 64.7 20.1 57 134-201 9-65 (310)
214 KOG2532 Permease of the major 97.8 0.00032 6.9E-09 75.6 13.4 181 24-224 248-445 (466)
215 KOG3098 Uncharacterized conser 97.7 0.015 3.3E-07 62.1 25.4 88 412-511 353-440 (461)
216 KOG0569 Permease of the major 97.7 0.001 2.2E-08 71.5 16.3 131 34-166 267-399 (485)
217 TIGR00924 yjdL_sub1_fam amino 97.6 0.001 2.2E-08 72.2 14.6 175 39-225 275-467 (475)
218 PRK11652 emrD multidrug resist 97.6 0.0025 5.4E-08 66.9 17.1 127 56-201 227-353 (394)
219 PF12832 MFS_1_like: MFS_1 lik 97.5 0.00076 1.6E-08 53.9 8.9 62 50-114 14-75 (77)
220 KOG0253 Synaptic vesicle trans 97.5 0.0018 3.8E-08 66.3 13.3 149 33-201 323-489 (528)
221 KOG3764 Vesicular amine transp 97.5 0.00052 1.1E-08 70.8 9.1 116 369-514 138-255 (464)
222 COG0477 ProP Permeases of the 97.4 0.0044 9.5E-08 60.5 14.7 146 50-214 16-173 (338)
223 TIGR00880 2_A_01_02 Multidrug 97.4 0.0045 9.9E-08 53.6 13.1 59 411-469 50-108 (141)
224 PF03825 Nuc_H_symport: Nucleo 97.3 0.0072 1.6E-07 64.0 16.4 177 34-224 206-393 (400)
225 PRK10207 dipeptide/tripeptide 97.3 0.0028 6.1E-08 69.0 13.4 141 48-201 281-434 (489)
226 PRK15403 multidrug efflux syst 97.3 0.011 2.4E-07 62.7 17.0 120 36-161 218-338 (413)
227 KOG1330 Sugar transporter/spin 97.2 0.00013 2.9E-09 76.4 2.0 112 368-512 99-215 (493)
228 PRK09584 tppB putative tripept 97.2 0.0061 1.3E-07 66.6 15.1 115 75-201 318-437 (500)
229 KOG2533 Permease of the major 97.1 0.0027 5.9E-08 68.9 10.4 166 26-210 262-440 (495)
230 TIGR00926 2A1704 Peptide:H+ sy 97.1 0.0083 1.8E-07 67.4 14.2 236 70-356 17-269 (654)
231 PF03137 OATP: Organic Anion T 97.0 0.00014 3E-09 79.9 -0.6 165 45-223 12-247 (539)
232 PF06813 Nodulin-like: Nodulin 96.9 0.042 9.2E-07 54.2 16.3 105 58-166 23-127 (250)
233 TIGR00805 oat sodium-independe 96.6 0.0047 1E-07 69.4 8.1 58 412-469 172-229 (633)
234 KOG3762 Predicted transporter 96.5 0.017 3.7E-07 62.0 10.6 93 411-511 458-552 (618)
235 PF01306 LacY_symp: LacY proto 96.5 0.074 1.6E-06 56.2 15.3 161 36-216 220-390 (412)
236 TIGR00806 rfc RFC reduced fola 96.5 0.042 9E-07 59.0 13.3 58 411-469 114-171 (511)
237 TIGR01301 GPH_sucrose GPH fami 96.2 0.17 3.6E-06 54.9 16.5 182 31-223 253-468 (477)
238 TIGR00788 fbt folate/biopterin 96.1 0.02 4.3E-07 62.0 8.5 125 64-201 280-406 (468)
239 KOG3574 Acetyl-CoA transporter 95.9 2.7 5.8E-05 43.8 23.7 165 3-201 14-188 (510)
240 PF06779 DUF1228: Protein of u 95.7 0.082 1.8E-06 42.9 8.5 74 46-125 5-78 (85)
241 PTZ00207 hypothetical protein; 95.7 0.1 2.2E-06 57.9 12.2 116 368-509 92-208 (591)
242 PF05978 UNC-93: Ion channel r 95.6 0.11 2.4E-06 47.4 10.1 74 83-166 47-120 (156)
243 COG0738 FucP Fucose permease [ 95.6 0.55 1.2E-05 49.1 16.0 103 53-166 253-355 (422)
244 KOG4332 Predicted sugar transp 95.6 0.34 7.3E-06 47.9 13.6 98 55-163 55-153 (454)
245 KOG3762 Predicted transporter 95.4 0.031 6.8E-07 60.0 6.6 158 50-226 385-547 (618)
246 PF01770 Folate_carrier: Reduc 95.4 0.26 5.7E-06 52.0 13.4 147 56-221 23-177 (412)
247 PF00083 Sugar_tr: Sugar (and 95.4 0.00033 7.1E-09 75.0 -8.5 142 44-201 260-404 (451)
248 PF06609 TRI12: Fungal trichot 95.2 0.43 9.4E-06 53.0 14.7 119 35-161 309-431 (599)
249 KOG2615 Permease of the major 95.1 0.37 7.9E-06 50.1 12.9 156 2-166 213-383 (451)
250 PRK15462 dipeptide/tripeptide 95.1 0.17 3.6E-06 55.1 11.2 84 418-509 106-192 (493)
251 PF00854 PTR2: POT family; In 95.0 0.23 5.1E-06 51.8 11.7 123 369-512 3-129 (372)
252 PF02487 CLN3: CLN3 protein; 94.8 6.5 0.00014 41.6 25.2 59 411-469 334-392 (402)
253 KOG0254 Predicted transporter 94.8 0.64 1.4E-05 50.9 14.9 90 76-166 332-426 (513)
254 PF03137 OATP: Organic Anion T 93.8 0.011 2.4E-07 65.0 -1.6 102 368-469 69-198 (539)
255 KOG0252 Inorganic phosphate tr 93.5 0.22 4.7E-06 52.9 7.3 165 41-223 309-495 (538)
256 PRK03612 spermidine synthase; 92.6 4.1 8.9E-05 44.8 16.1 43 56-99 34-76 (521)
257 KOG2816 Predicted transporter 92.6 0.68 1.5E-05 50.0 9.9 140 41-201 246-385 (463)
258 PF06813 Nodulin-like: Nodulin 91.4 2.3 5E-05 41.9 11.3 117 369-510 68-185 (250)
259 KOG0637 Sucrose transporter an 90.8 0.7 1.5E-05 49.1 7.2 154 36-201 32-198 (498)
260 KOG2325 Predicted transporter/ 89.9 2.4 5.2E-05 45.8 10.6 81 370-469 105-186 (488)
261 KOG0255 Synaptic vesicle trans 88.6 2.3 4.9E-05 46.5 9.7 85 410-505 169-254 (521)
262 KOG3098 Uncharacterized conser 88.2 13 0.00029 40.0 14.7 145 41-200 248-406 (461)
263 KOG2563 Permease of the major 88.0 7.6 0.00016 41.4 12.4 122 36-163 266-387 (480)
264 TIGR00769 AAA ADP/ATP carrier 87.6 27 0.00058 37.9 16.8 52 418-469 382-434 (472)
265 KOG3626 Organic anion transpor 86.8 1.6 3.5E-05 49.3 7.1 145 368-512 163-349 (735)
266 PF05978 UNC-93: Ion channel r 85.8 6.5 0.00014 35.8 9.4 59 411-469 88-146 (156)
267 PF06963 FPN1: Ferroportin1 (F 84.4 21 0.00046 38.2 13.9 110 54-166 276-387 (432)
268 PF03092 BT1: BT1 family; Int 81.0 18 0.00039 38.7 12.0 53 416-469 90-145 (433)
269 TIGR00939 2a57 Equilibrative N 78.5 12 0.00027 40.1 9.7 90 411-506 105-196 (437)
270 COG3104 PTR2 Dipeptide/tripept 76.2 43 0.00093 36.3 12.7 134 55-201 303-449 (498)
271 KOG4332 Predicted sugar transp 75.2 21 0.00046 35.7 9.3 133 75-221 284-426 (454)
272 PF03219 TLC: TLC ATP/ADP tran 74.4 1.4E+02 0.003 32.7 17.3 33 70-103 173-205 (491)
273 PF01770 Folate_carrier: Reduc 71.9 89 0.0019 33.2 13.7 59 410-469 92-150 (412)
274 PF06679 DUF1180: Protein of u 58.7 17 0.00037 33.3 4.7 25 485-509 95-119 (163)
275 KOG3097 Predicted membrane pro 58.6 69 0.0015 33.1 9.3 100 49-166 41-141 (390)
276 PF15471 TMEM171: Transmembran 54.6 36 0.00078 33.5 6.3 65 473-537 138-212 (319)
277 KOG4830 Predicted sugar transp 50.1 14 0.0003 36.7 2.8 102 44-154 25-147 (412)
278 KOG4255 Uncharacterized conser 47.6 3.4E+02 0.0074 28.1 13.8 113 409-530 110-240 (439)
279 PRK11715 inner membrane protei 43.0 3.2E+02 0.0069 29.4 11.9 73 372-469 306-378 (436)
280 PF03219 TLC: TLC ATP/ADP tran 42.8 4.8E+02 0.011 28.5 13.9 53 420-472 148-205 (491)
281 KOG1479 Nucleoside transporter 42.1 2.4E+02 0.0052 29.9 10.7 86 415-507 120-205 (406)
282 PF06123 CreD: Inner membrane 42.0 3.5E+02 0.0077 29.0 12.1 73 372-469 300-372 (430)
283 PF01733 Nucleoside_tran: Nucl 39.9 9.6 0.00021 38.8 0.0 82 420-508 5-86 (309)
284 KOG1237 H+/oligopeptide sympor 39.4 1E+02 0.0022 34.4 7.9 95 412-513 152-252 (571)
285 PF06963 FPN1: Ferroportin1 (F 39.2 5.2E+02 0.011 27.7 26.3 60 410-469 354-413 (432)
286 PF09527 ATPase_gene1: Putativ 38.2 1.4E+02 0.003 21.6 6.1 34 82-115 9-42 (55)
287 PF07857 DUF1632: CEO family ( 37.9 93 0.002 30.8 6.5 60 443-507 74-137 (254)
288 PF02487 CLN3: CLN3 protein; 37.9 3E+02 0.0065 29.2 10.7 136 41-201 252-390 (402)
289 PF12606 RELT: Tumour necrosis 36.9 69 0.0015 23.2 4.0 14 503-516 21-34 (50)
290 PF06027 DUF914: Eukaryotic pr 35.0 2.2E+02 0.0047 29.5 8.9 15 185-199 79-93 (334)
291 COG5058 LAG1 Protein transport 34.5 38 0.00083 34.3 3.2 52 480-532 334-386 (395)
292 TIGR00769 AAA ADP/ATP carrier 34.1 6.4E+02 0.014 27.4 17.9 30 70-99 158-187 (472)
293 TIGR00939 2a57 Equilibrative N 34.0 2.6E+02 0.0056 30.0 9.7 115 74-201 308-427 (437)
294 COG0477 ProP Permeases of the 32.5 1.6E+02 0.0034 27.8 7.4 59 411-469 93-153 (338)
295 COG5336 Uncharacterized protei 29.8 1.8E+02 0.004 24.7 5.9 24 86-109 55-78 (116)
296 PF06570 DUF1129: Protein of u 27.8 5.2E+02 0.011 24.4 9.9 84 421-510 118-202 (206)
297 KOG2082 K+/Cl- cotransporter K 26.9 4.2E+02 0.0091 30.6 9.7 22 105-126 497-518 (1075)
298 KOG0637 Sucrose transporter an 26.5 2.9E+02 0.0064 29.9 8.3 92 31-123 274-381 (498)
299 PF07522 DRMBL: DNA repair met 26.1 36 0.00078 28.8 1.3 24 4-28 77-100 (110)
300 COG5336 Uncharacterized protei 25.2 3.4E+02 0.0074 23.1 6.7 31 439-469 33-63 (116)
301 COG3202 ATP/ADP translocase [E 24.1 2.2E+02 0.0047 31.1 6.9 53 420-472 152-209 (509)
302 KOG1479 Nucleoside transporter 21.4 1E+03 0.022 25.4 11.5 57 411-467 342-398 (406)
303 PF05545 FixQ: Cbb3-type cytoc 21.4 1.4E+02 0.003 21.2 3.4 14 511-524 34-47 (49)
304 PF06645 SPC12: Microsomal sig 21.1 2.2E+02 0.0047 22.5 4.7 44 187-230 13-60 (76)
305 KOG2601 Iron transporter [Inor 20.9 1.9E+02 0.0042 30.5 5.5 115 409-534 383-499 (503)
306 PF06610 DUF1144: Protein of u 20.2 2.5E+02 0.0053 24.9 5.2 84 1-100 53-136 (143)
No 1
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-63 Score=540.67 Aligned_cols=461 Identities=27% Similarity=0.368 Sum_probs=403.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
+++.++++.|.+||++++|+..+++.|+++.+ +.+...|+..++.|.+.+++.|++|++++|.|+||+++|.++++++.
T Consensus 37 ~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~-~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~ 115 (571)
T KOG1237|consen 37 LSAPFILGNEVLERLAFFGLVSNLVTYLTLEL-HASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISL 115 (571)
T ss_pred HhHHHHHHHHHHHHHhHhcchhHHHHHHHHHh-ccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHhhhcccc-----------------ccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCccccc
Q 009308 116 LGLVLLFITAFEEA-----------------ASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHR 178 (538)
Q Consensus 116 ~G~~ll~~~~~~~~-----------------~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~ 178 (538)
+|..++..++..+. ++..+...++.++.++++|.|+.+||+.++++||+++ .+|+++.
T Consensus 116 ~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~-----~~~~~~~ 190 (571)
T KOG1237|consen 116 LGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDE-----LDPVEVK 190 (571)
T ss_pred HHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCc-----cCcchhh
Confidence 99888887765442 2334678999999999999999999999999999997 6778888
Q ss_pred ceeeeehhhHHHHHHHHHHHHHh-------hhhhHHHHHHHHHHHHHHHHHHhcccceeeccCCCCCCCCchHHHHHHHH
Q 009308 179 VSARKRVWWLIPFFFSVIASVQL-------SSWRVISTFTVSATGITLFIFRLGIRFFHSTEITGPAAGSSLAVVFRVVK 251 (538)
Q Consensus 179 ~~~~~f~~~y~~~niG~~i~~~~-------~g~~~~F~i~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~l~~~~~v~~ 251 (538)
.+.++|+|+|+..|+|.+++.++ .||.++|.++++++.+++++|+.+.+.|++++| .++|+..+.+|++
T Consensus 191 ~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p----~gsp~t~i~~Vlv 266 (571)
T KOG1237|consen 191 GIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKP----RGSPKTRIGQVLV 266 (571)
T ss_pred CcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCC----CCCchhHHHHHHH
Confidence 88999999999999999999876 799999999999999999999999999999999 8999999999999
Q ss_pred HHHhhccCCCCCCCccccccccCcccccCCccccchhhhcccccCCCCCCCccc-ccccccccccchhhHHHHHHhHHHH
Q 009308 252 AALSKRHLNNPYSSNQLYRNDQNQVHLFPQVKFFRWLDKAAIIEPSTTLISPEE-QEKAGRLCTVAQVRDTKLMLKMVPI 330 (538)
Q Consensus 252 ~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~g-~~~~~~~~~~~~ved~k~~l~~l~l 330 (538)
++.++++...+...+.+ +.+.......++++.++++|+++.....+ . .++ ....|+.|+.++|||+|..+|++|+
T Consensus 267 aa~~k~~~~~~~~~~~~-~~~~~~~~~~~~t~~f~~l~kaa~~~~~~--~-~~~~~~~~w~lct~~~Vee~K~~lr~~Pi 342 (571)
T KOG1237|consen 267 AAAFKRKAVVSLDPEEL-YYDCTDSVAIEGTKPFRFLDKAALKTSDD--L-KDGLDANPWRLCTVTQVEEVKAVLRLLPI 342 (571)
T ss_pred HHHHHHhccCCCcchhc-cccccccccccCCcccchhhHhhccCCcc--c-ccccccCCccCCCceehhhhhhhhhhhHH
Confidence 99999876655443222 11111122233467889999988753321 1 112 2235999999999999999999999
Q ss_pred HhhhhhhHHhhccccchhhhhcccCCC--------c-------------------cc---------CCCC---CchhHHH
Q 009308 331 WTTFVVFGLIVSTGQTFFPEQGNQLNP--------K-------------------EA---------KKKG---AKIVRIW 371 (538)
Q Consensus 331 ~~~~~~f~~~~~Q~~s~~~~q~~~~~~--------P-------------------d~---------~g~~---s~~~ri~ 371 (538)
|.+.++||+++.|+.+++++|+.+||+ | || ++.+ ++++|++
T Consensus 343 ~~~~i~~~~~~aq~~t~~v~Q~~~mdr~~~~~f~ip~asl~~f~~~~~~~~iplydr~~vP~~~~~t~~~~~~t~lqrig 422 (571)
T KOG1237|consen 343 WLTTIIYSTVYAQMVTFFVLQATTMDRHLGSNFKIPAASLQVFILLSILIFIPLYDRVIVPFARKLTGNPFGITPLQRIG 422 (571)
T ss_pred HHHHHHHHHHHHhhhhheehhhhhcCCCCCCCeEeCchhHHHHHHHHHHhhhhhcceeehhhhhhhcCCCCCCChhheee
Confidence 999999999999999999999999997 2 33 3322 8899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCccchhhHhHHHHHHHHHHHHHHhhhhHHHHHhhCCcchhhHHHH
Q 009308 372 AGMVLSTICCAVAWRVEVHRLIIINNKGLLGNTDEVIPMSIFWLAPQFCLLGLMKGLARDGINKFLADQFPEPMHDCVSA 451 (538)
Q Consensus 372 iG~~l~~l~~~~~~~~e~~~~~~~~~~g~~~~~~~~~~~s~~~li~~~~l~glgE~l~~p~~~~~~~~~aP~~~rg~~~g 451 (538)
+|+++..++|.+++.+|.+|++.+.++ ....+++|++||+|||+++|+||++.+++++||+|+|+|++|||++++
T Consensus 423 ~G~~~si~sm~~aa~vE~krl~~~~~~-----~~~~~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~a 497 (571)
T KOG1237|consen 423 IGLVLSILSMAVAGIVEAKRLKTAVSL-----LVETNPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATA 497 (571)
T ss_pred ccchHHHHHHHHHHHHHHHHhhhhhhc-----cCCCCCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHH
Confidence 999999999999999999999876541 123579999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhh-ccc------cccc-ccCCCcchhHHHHHHHHHHHHHHHHHHhhhcccccCCCc
Q 009308 452 ITELVTGFASFVNIVSVY-FNK------SLFA-DTLNSSRLDEYYKMLTIVSFINICYFWWISTFYTRGGDT 515 (538)
Q Consensus 452 l~~l~~~iG~~l~~~l~~-~~~------~~~~-~~~n~~~l~~~f~~la~l~~v~~~~~~~~~~~~~~~~~~ 515 (538)
+|+++.++|++++..++. +.. +|++ +|+|.+|+++|||+++.+..++.+.|++++++|++++.+
T Consensus 498 l~l~t~a~G~~lss~Lv~~v~~~t~~~~~w~~~~~ln~~~ld~Fy~lla~~~~~n~~~~~~~~~~y~~~~~~ 569 (571)
T KOG1237|consen 498 LWLLTVAVGNYLSSVLVSLVQFSTGKAAEWLGFANLNKGRLDYFYWLLAVYSAVNFLYFLICAKRYDYKDDK 569 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCcccCChhHhhhhHHHHHHHHHHHHHhhhhhheEEEEEeeeecccc
Confidence 999999999999999997 221 5999 999999999999999999999999999999999888654
No 2
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-52 Score=432.81 Aligned_cols=422 Identities=14% Similarity=0.131 Sum_probs=322.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCC----CChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHH
Q 009308 33 CFCKAALILLGLIFSHKLVDIAVVAVLITYLTDYPRN----YNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIF 108 (538)
Q Consensus 33 ~~~~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g----~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~ 108 (538)
++||+++.++.+|+||||+|||+++.|+.|++.++ + +++++|..+.+.|...+|++|++|||+|||++|+|||+.
T Consensus 18 ~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~-~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~ 96 (498)
T COG3104 18 GQPRGLYLIFFVELWERFSYYGMRAILILYLYYQL-GDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIV 96 (498)
T ss_pred CCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhc-cccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHH
Confidence 47999999999999999999999999999999766 5 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhH
Q 009308 109 YSTISCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWL 188 (538)
Q Consensus 109 ~~~~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y 188 (538)
.|.+++.+|+++++.++. .+...+++++.++++|+|++|||++++++|+||+ +|| +|+..|+.+|
T Consensus 97 lGail~~iGh~~L~~~~~------~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~-----~Dp----rrD~gFt~fY 161 (498)
T COG3104 97 LGAILMAIGHLVLAISSV------SGPGGLYIGLALIIVGTGLFKPNISSLLGELYPK-----DDP----RRDGGFTLFY 161 (498)
T ss_pred HHHHHHHHHHHHHhcccc------ccccHHHHHHHHHHhccccccccHHHHHHHhcCC-----CCc----ccCCCccEEE
Confidence 999999999999998741 1356899999999999999999999999999998 666 4789999999
Q ss_pred HHHHHHHHHHHHh-------hhhhHHHHHHHHHHHHHHHHHHhcccceeeccCCCCCCCCchHHHH------HHHHHHHh
Q 009308 189 IPFFFSVIASVQL-------SSWRVISTFTVSATGITLFIFRLGIRFFHSTEITGPAAGSSLAVVF------RVVKAALS 255 (538)
Q Consensus 189 ~~~niG~~i~~~~-------~g~~~~F~i~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~l~~~~------~v~~~a~~ 255 (538)
+++|+|+++++.+ +||+.+|.++++.|.++++.++++++++..... +.+.+|++.-. .+++....
T Consensus 162 ~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (498)
T COG3104 162 MGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGG--VPDPNPLSFNFLLPVLGGLVVMILA 239 (498)
T ss_pred EEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCC--CCCccchhhhhhhhhHHHHHHHHHH
Confidence 9999999999987 899999999999999999999999877655431 11333432110 00000000
Q ss_pred hccCCCCCCCccccccccCcccccCCccccch-hhhcccccCCCCCCCcccccccccccccchhhHHHHHHhHHHHHhhh
Q 009308 256 KRHLNNPYSSNQLYRNDQNQVHLFPQVKFFRW-LDKAAIIEPSTTLISPEEQEKAGRLCTVAQVRDTKLMLKMVPIWTTF 334 (538)
Q Consensus 256 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-l~~a~~~~~~~~~~~~~g~~~~~~~~~~~~ved~k~~l~~l~l~~~~ 334 (538)
- + ++.. ...+.++. +....+.. +. +....-...++.+ ||+|++++++|++++.
T Consensus 240 ~-----~-----~~~~--------l~~~~~~~~~~~~~i~~-~~------~~~~~~~~~~~~~-~er~r~~~~~~Lfl~~ 293 (498)
T COG3104 240 A-----L-----LTLL--------LNQNTFSGVLLVISILI-AI------IYFAEAFRSPKVF-DERRRLLAAIPLFLFA 293 (498)
T ss_pred H-----H-----HHHH--------HHHHHHHHHHHHHHHHH-HH------HHHHHHhccCccH-HHHHHHHHHHHHHHHH
Confidence 0 0 0000 00000000 00000000 00 0000000113344 8899999999999999
Q ss_pred hhhHHhhccccchhhhhccc-CCC-------c---------------------------ccCCCCCchhHHHHHHHHHHH
Q 009308 335 VVFGLIVSTGQTFFPEQGNQ-LNP-------K---------------------------EAKKKGAKIVRIWAGMVLSTI 379 (538)
Q Consensus 335 ~~f~~~~~Q~~s~~~~q~~~-~~~-------P---------------------------d~~g~~s~~~ri~iG~~l~~l 379 (538)
++||++|+|++|.++.|+.+ .|+ | ++.+.+++..|+++|++++++
T Consensus 294 ~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~ 373 (498)
T COG3104 294 VIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGL 373 (498)
T ss_pred HHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHH
Confidence 99999999999999888753 222 2 112233788899999999999
Q ss_pred HHHHHHHHHHHHHhhhhccCCCCCCCCCccchhhHhHHHHHHHHHHHHHHhhhhHHHHHhhCCcchhhHHHHHHHHHHHH
Q 009308 380 CCAVAWRVEVHRLIIINNKGLLGNTDEVIPMSIFWLAPQFCLLGLMKGLARDGINKFLADQFPEPMHDCVSAITELVTGF 459 (538)
Q Consensus 380 ~~~~~~~~e~~~~~~~~~~g~~~~~~~~~~~s~~~li~~~~l~glgE~l~~p~~~~~~~~~aP~~~rg~~~gl~~l~~~i 459 (538)
++++......+. | +....+|++|++++|+++++||++++|+++|++++++|++++|++||+|+++.+.
T Consensus 374 ~fl~l~~~~~~~-------~-----~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~ 441 (498)
T COG3104 374 GFLILLLAGIWF-------G-----GPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAA 441 (498)
T ss_pred HHHHHHHHHHhh-------c-----CCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 998877654321 1 1134689999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcccccccccCCCcchhHHHHHHHHHHHHHHHHHHhhhccccc
Q 009308 460 ASFVNIVSVYFNKSLFADTLNSSRLDEYYKMLTIVSFINICYFWWISTFYTR 511 (538)
Q Consensus 460 G~~l~~~l~~~~~~~~~~~~n~~~l~~~f~~la~l~~v~~~~~~~~~~~~~~ 511 (538)
|+.+++.+.+.... ..+..+......+|+.++.+.++...+....+++.++
T Consensus 442 ~~~l~g~va~~~~~-~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~~~~~r 492 (498)
T COG3104 442 GQTLGGQVAGLTAV-TDPAYTAFIEGRVFGTIGVVAIVIGILLLLLSPKLNR 492 (498)
T ss_pred HHHhhceecccccc-cchhhhhhhhhhhHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 99999999882210 0111222334568899999999988888888877643
No 3
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=100.00 E-value=3.5e-42 Score=379.67 Aligned_cols=403 Identities=19% Similarity=0.287 Sum_probs=327.8
Q ss_pred HHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhcccc
Q 009308 50 LVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEA 129 (538)
Q Consensus 50 ~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~ 129 (538)
|+|||+.++|++|+++.+ |+++++|..+.+.|.+.+|++|++||+++|+++||+|++.++.+++.+|++++++++.++.
T Consensus 1 FsyYGm~aiLvlYl~~~l-g~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~ 79 (654)
T TIGR00926 1 FSYYGMRTILVLYFLNFL-GFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSS 79 (654)
T ss_pred CceeecHHHHHHHHHHHc-CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCccc
Confidence 589999999999999999 9999999999999999999999999999999999999999999999999999998765432
Q ss_pred ccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-------h
Q 009308 130 ASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL-------S 202 (538)
Q Consensus 130 ~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~-------~ 202 (538)
....+....++++.++++|.|++|||+.++++||+++ ++++++.++|+|||+++|+|++++..+ +
T Consensus 80 ~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~--------~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~ 151 (654)
T TIGR00926 80 GHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEE--------RQLSLRSRFFSFFYFAINAGSLISTIITPILRGDV 151 (654)
T ss_pred ccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCc--------cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 1112344578999999999999999999999999975 333468899999999999999999775 2
Q ss_pred -------hhhHHHHHHHHHHHHHHHHHHhcccceeeccCCCCCCCCchHHHHHHHHHHHhhccCCCCCCCccccccccCc
Q 009308 203 -------SWRVISTFTVSATGITLFIFRLGIRFFHSTEITGPAAGSSLAVVFRVVKAALSKRHLNNPYSSNQLYRNDQNQ 275 (538)
Q Consensus 203 -------g~~~~F~i~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~l~~~~~v~~~a~~~~~~~~~~~~~~l~~~~~~~ 275 (538)
||.++|+++++++++++++|+.++++|+..+| .++++.++.++++.+.+++......
T Consensus 152 ~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p----~gs~l~~v~~vi~~a~~~~~~~~~~------------ 215 (654)
T TIGR00926 152 GCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPP----KGNIVSKVIKCIVTALRKRFSTRSE------------ 215 (654)
T ss_pred cccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCC----CccHHHHHHHHHHHHHHHhhccCCc------------
Confidence 59999999999999999999999998887777 7888888888888887654321100
Q ss_pred ccccCCccccchhhhcccccCCCCCCCcccccccccccccchhhHHHHHHhHHHHHhhhhhhHHhhccccchhhhhcccC
Q 009308 276 VHLFPQVKFFRWLDKAAIIEPSTTLISPEEQEKAGRLCTVAQVRDTKLMLKMVPIWTTFVVFGLIVSTGQTFFPEQGNQL 355 (538)
Q Consensus 276 ~~~~~~~~~~~~l~~a~~~~~~~~~~~~~g~~~~~~~~~~~~ved~k~~l~~l~l~~~~~~f~~~~~Q~~s~~~~q~~~~ 355 (538)
....+|+|+++.. ..++++||+|++++++++++..++||..++|+++.++.|+.+|
T Consensus 216 ------~~~~~~ld~a~~~------------------~~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~~qa~~m 271 (654)
T TIGR00926 216 ------HWPLHWLDYAKDK------------------HDIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQATRM 271 (654)
T ss_pred ------ccchhHHHHhccc------------------cccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHh
Confidence 0124567765321 2356799999999999999999999999999999999999877
Q ss_pred CC-------c---------------------------ccCCCC-CchhHHHHHHHHHHHHHHHHHHHHHHHHhh------
Q 009308 356 NP-------K---------------------------EAKKKG-AKIVRIWAGMVLSTICCAVAWRVEVHRLII------ 394 (538)
Q Consensus 356 ~~-------P---------------------------d~~g~~-s~~~ri~iG~~l~~l~~~~~~~~e~~~~~~------ 394 (538)
++ | +|++.+ ++++|+++|++++++++++++++|.++.+.
T Consensus 272 ~~~l~g~~ip~~~lq~~n~L~IIil~Pi~~~~lyp~l~~~~~~ls~l~k~~iG~~la~la~~va~~ve~~~~~~~~~~~~ 351 (654)
T TIGR00926 272 DGDVGGFEIQPDQMQVVNPLLILIFVPIFDYIVYPAIAKCGTRFTSLRKMAVGGLLAALSFFVAALVQLKVNPTLPEEPS 351 (654)
T ss_pred cCccCCEecCHHHHHHHHHHHHHHhHHHHHHhHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCC
Confidence 64 1 234444 889999999999999999999988721100
Q ss_pred -----------------------------------------------------------------------------h--
Q 009308 395 -----------------------------------------------------------------------------I-- 395 (538)
Q Consensus 395 -----------------------------------------------------------------------------~-- 395 (538)
.
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (654)
T TIGR00926 352 ANEIFLQVLNTDCTICDFSVLSKRVLPHDVYLHLDKKNTSGDQGLFTTKSSAKGWTLTYDLSYDGACGLTGNCPKTTDAH 431 (654)
T ss_pred CcceEEEEecCCCCcceEEEEecCCcccccccccCccccccccccccccccccccceEEEEeccccccccCCCCccccce
Confidence 0
Q ss_pred --h-cc--CC----------------------------------------------------------------------
Q 009308 396 --N-NK--GL---------------------------------------------------------------------- 400 (538)
Q Consensus 396 --~-~~--g~---------------------------------------------------------------------- 400 (538)
. ++ .+
T Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (654)
T TIGR00926 432 ELEPKISYVLLLSQGGYQLTANTDKPTDAKTEKGMGSVRLVNTLNGEFGMISLCTSDSDSVTPCNPRDPYDFYFRGTKYP 511 (654)
T ss_pred eecCCceEEEEEecCCcceeeeeecCccCCCCCCCceEEEEecCCCcceeeEEecccCcccccCCcccccccccccceee
Confidence 0 00 00
Q ss_pred -------------------C-----------CC----C--------CCCccchhhHhHHHHHHHHHHHHHHhhhhHHHHH
Q 009308 401 -------------------L-----------GN----T--------DEVIPMSIFWLAPQFCLLGLMKGLARDGINKFLA 438 (538)
Q Consensus 401 -------------------~-----------~~----~--------~~~~~~s~~~li~~~~l~glgE~l~~p~~~~~~~ 438 (538)
. ++ . ...+++|++||+|||++.++||++.+++++|+.+
T Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wq~pq~~~~~~~e~~~~~~~~e~~~ 591 (654)
T TIGR00926 512 ANTCDRIDNAKSSTFLSNQLDMGIYYLIVITENSKIDELQAQIVELVSVNTVSILWQIPQYVILTAGEVLFSVTGLEFSY 591 (654)
T ss_pred eeecccccccccccccccccccceEEEEEEcCCCCCCcceeEEEEecCCCceeHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 0 00 0 0245689999999999999999999999999999
Q ss_pred hhCCcchhhHHHHHHHHHHHHHHHHHHHhhhcccccccccCCCcchhHHHHHHHHHHHHHHHHHHhhhccc
Q 009308 439 DQFPEPMHDCVSAITELVTGFASFVNIVSVYFNKSLFADTLNSSRLDEYYKMLTIVSFINICYFWWISTFY 509 (538)
Q Consensus 439 ~~aP~~~rg~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~n~~~l~~~f~~la~l~~v~~~~~~~~~~~~ 509 (538)
+++|++||+..+++|.++.++|+.+...+..... .++...-|.+++.++++..++|.++++.|
T Consensus 592 ~~~p~~mks~~~a~~~~~~~~g~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~f~~~a~~Y 654 (654)
T TIGR00926 592 SQAPPNMKSVLQALWLLTVAIGNLIVVVIAEFEN--------FSVQAAEFFLFASLMLVVMAIFSILAYFY 654 (654)
T ss_pred HhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--------ChHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999988876332 11223347788999999999999998765
No 4
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=100.00 E-value=8.3e-41 Score=361.27 Aligned_cols=419 Identities=11% Similarity=0.067 Sum_probs=306.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHH
Q 009308 33 CFCKAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTI 112 (538)
Q Consensus 33 ~~~~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~ 112 (538)
++||.++.++..|++||++||++.+.+++|+++++ |.++++++++.+.+....+++++++|+++||++||||++.++.+
T Consensus 11 ~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~l-g~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~ 89 (489)
T PRK10207 11 QQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQL-GFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAI 89 (489)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHH
Confidence 36899999999999999999999999999999999 99999999999999999999999999999997799999999999
Q ss_pred HHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHH
Q 009308 113 SCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFF 192 (538)
Q Consensus 113 ~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~n 192 (538)
++.+|++++.++.. ....++++|.++++|.|+++|+..++++|++|+ ++ +++++.++++|+++|
T Consensus 90 ~~~~g~~~~~~~~~-------~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~-----~~----~~~~~~~~~~~~~~n 153 (489)
T PRK10207 90 VLAIGYFMTGMSLL-------KPDLIFIALGTIAVGNGLFKANPASLLSKCYPP-----KD----PRLDGAFTLFYMSIN 153 (489)
T ss_pred HHHHHHHHHHHhcc-------chhHHHHHHHHHHhccccccCCHHHHHHHhcCC-----Cc----hhhhcchhHHHHHHH
Confidence 99999999887642 123466899999999999999999999999986 22 245678999999999
Q ss_pred HHHHHHHHh-------hhhhHHHHHHHHHHHHHHHHHHhcccceeeccCCCCCCCCchH--HHHHHH------HHHHhhc
Q 009308 193 FSVIASVQL-------SSWRVISTFTVSATGITLFIFRLGIRFFHSTEITGPAAGSSLA--VVFRVV------KAALSKR 257 (538)
Q Consensus 193 iG~~i~~~~-------~g~~~~F~i~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~l~--~~~~v~------~~a~~~~ 257 (538)
+|+++|+.+ .||++.|.++.+.++++++.+...+++++..+++ | ++++.. ...... .......
T Consensus 154 ig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~d~~~~~l~~~~~~~~~~~~~~~ 231 (489)
T PRK10207 154 IGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVKDIGSE-P-DHKPMSFSKLLLVLLGSVVMIFVCAWL 231 (489)
T ss_pred HHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhcccCCC-C-CccchhhhhHHHHHHHHHHHHHHHHHH
Confidence 999998775 7999999998888887777777776655443210 0 222221 111000 0000000
Q ss_pred cCCCCCCCccccccccCcccccCCccccchhhhcccccCCCCCCCcccccccccccccchhhHHHHHHhHHHHHhhhhhh
Q 009308 258 HLNNPYSSNQLYRNDQNQVHLFPQVKFFRWLDKAAIIEPSTTLISPEEQEKAGRLCTVAQVRDTKLMLKMVPIWTTFVVF 337 (538)
Q Consensus 258 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~g~~~~~~~~~~~~ved~k~~l~~l~l~~~~~~f 337 (538)
.+..... . ..+...... .. .. ..+...+.+ ..++++.+..+++++..++|
T Consensus 232 -~~~~~~~-----------------~--~~~~~~~~i--~~------~~-f~~~~~~~~-~~~r~r~~~~~~l~~~~~~f 281 (489)
T PRK10207 232 -MHNVEVA-----------------N--LVLIVLSIV--VT------II-FFREAFKLD-KTGRNKMFVAFVLMLEAVVF 281 (489)
T ss_pred -HhhhhHH-----------------H--HHHHHHHHH--HH------HH-HHHHHhcCC-HHHHHHHHHHHHHHHHHHHH
Confidence 0000000 0 000000000 00 00 000011122 23455666777888889999
Q ss_pred HHhhccccchhhhhcc-cCCC------------------------c------cc---CCCC-CchhHHHHHHHHHHHHHH
Q 009308 338 GLIVSTGQTFFPEQGN-QLNP------------------------K------EA---KKKG-AKIVRIWAGMVLSTICCA 382 (538)
Q Consensus 338 ~~~~~Q~~s~~~~q~~-~~~~------------------------P------d~---~g~~-s~~~ri~iG~~l~~l~~~ 382 (538)
|..++|..+.++.+.. ++++ | +| ++.+ ++.+|+++|+++.+++++
T Consensus 282 ~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~ 361 (489)
T PRK10207 282 YILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFL 361 (489)
T ss_pred HHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHH
Confidence 9999999887766654 2332 1 33 4444 888999999999999988
Q ss_pred HHHHHHHHHHhhhhccCCCCCCCCCccchhhHhHHHHHHHHHHHHHHhhhhHHHHHhhCCcchhhHHHHHHHHHHHHHHH
Q 009308 383 VAWRVEVHRLIIINNKGLLGNTDEVIPMSIFWLAPQFCLLGLMKGLARDGINKFLADQFPEPMHDCVSAITELVTGFASF 462 (538)
Q Consensus 383 ~~~~~e~~~~~~~~~~g~~~~~~~~~~~s~~~li~~~~l~glgE~l~~p~~~~~~~~~aP~~~rg~~~gl~~l~~~iG~~ 462 (538)
+++..+... ... ...+|+||+++.|++.|+||++.+|++++++++.+|++++|.+||+|+++.++|+.
T Consensus 362 ~~~~~~~~~---~~~---------~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~ 429 (489)
T PRK10207 362 TAAAAGMWF---ADA---------QGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFL 429 (489)
T ss_pred HHHHHHHhh---cCC---------CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 776543211 000 12478999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhh-cccccccccCC-----CcchhHHHHHHHHHHHHHHHHHHhhhcccccCCCc
Q 009308 463 VNIVSVY-FNKSLFADTLN-----SSRLDEYYKMLTIVSFINICYFWWISTFYTRGGDT 515 (538)
Q Consensus 463 l~~~l~~-~~~~~~~~~~n-----~~~l~~~f~~la~l~~v~~~~~~~~~~~~~~~~~~ 515 (538)
+|+.+.+ ... +++.. ++.+..+|..+++++++..++++++.|++++...+
T Consensus 430 lg~~l~~~~~~---~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~ 485 (489)
T PRK10207 430 LGGYVATFTAV---PDNITDPLETLPVYTNVFGKIGLVTLGVAVVMALMVPWLNRMINT 485 (489)
T ss_pred HHHHHHHHhcc---ccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999987 321 11111 22456789999999999999999988888665333
No 5
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=100.00 E-value=8.2e-40 Score=349.89 Aligned_cols=421 Identities=13% Similarity=0.072 Sum_probs=304.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHH
Q 009308 33 CFCKAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTI 112 (538)
Q Consensus 33 ~~~~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~ 112 (538)
++|++++.+++.|++||++||++...++.|+++.+ |+++.+++.+.+.+....+++++++|+++||++||||++.++.+
T Consensus 6 ~~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~l-gls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~i 84 (493)
T PRK15462 6 SQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQL-KYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGAL 84 (493)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHH
Confidence 47899999999999999999999999999999999 99999999999999999999999999999997799999999999
Q ss_pred HHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHH
Q 009308 113 SCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFF 192 (538)
Q Consensus 113 ~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~n 192 (538)
+..+|++++..... ....+++++.+.++|.|..+++.+++++|++|+ +| ++|++.++++|.++|
T Consensus 85 l~~lg~lll~~~~~-------~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~-----~~----~~R~sgf~i~Y~~~n 148 (493)
T PRK15462 85 LMAIGHVVLGASEI-------HPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEP-----TD----PRRDGGFSLMYAAGN 148 (493)
T ss_pred HHHHHHHHHHHhhc-------chhHHHHHHHHHHHhcccccccHHHHHHHHCCC-----CC----ccccceehHHHHHHH
Confidence 99999887764321 123466777788899999999999999999986 32 246789999999999
Q ss_pred HHHHHHHHh-------hhhhHHHHHHHHHHHHHHHHHHhcccceeeccCCCCCCCCchH--HHHHHH-----HH-----H
Q 009308 193 FSVIASVQL-------SSWRVISTFTVSATGITLFIFRLGIRFFHSTEITGPAAGSSLA--VVFRVV-----KA-----A 253 (538)
Q Consensus 193 iG~~i~~~~-------~g~~~~F~i~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~l~--~~~~v~-----~~-----a 253 (538)
+|+++++.+ +||+++|.++++.++++++.++..++++.+...+ +.+|.+ +....+ .. .
T Consensus 149 lG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (493)
T PRK15462 149 VGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGV---NKKVLRATNFLLPNWGWLLVLLVATPA 225 (493)
T ss_pred HHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCC---CCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 999999887 6999999999998988888888777665442110 112221 100000 00 0
Q ss_pred HhhccCCCCCCCccccccccCcccccCCccccchh-hhcccccCCCCCCCcccccccccccccchhhHHHHHHhHHHHHh
Q 009308 254 LSKRHLNNPYSSNQLYRNDQNQVHLFPQVKFFRWL-DKAAIIEPSTTLISPEEQEKAGRLCTVAQVRDTKLMLKMVPIWT 332 (538)
Q Consensus 254 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l-~~a~~~~~~~~~~~~~g~~~~~~~~~~~~ved~k~~l~~l~l~~ 332 (538)
+..... . .+....+ -..... .. .- ..+........+|+|++..++++++
T Consensus 226 ~~~~~~---------~------------~~~~~~~~~~~~~~--~~------~~-~~~~~~~~~~~~er~r~~~~~~l~~ 275 (493)
T PRK15462 226 LITVLF---------W------------KEWSVYALIVATII--GL------GV-LAKIYRKAENQKQRKELGLIVTLTF 275 (493)
T ss_pred HHHHHH---------H------------HHHHHHHHHHHHHH--HH------HH-HHHHHHhcCCHHHHhhHHHHHHHHH
Confidence 000000 0 0000000 000000 00 00 0000001123477888999999999
Q ss_pred hhhhhHHhhccccchhhhhcc-cCCC-------c--------------------------ccCCC-CCchhHHHHHHHHH
Q 009308 333 TFVVFGLIVSTGQTFFPEQGN-QLNP-------K--------------------------EAKKK-GAKIVRIWAGMVLS 377 (538)
Q Consensus 333 ~~~~f~~~~~Q~~s~~~~q~~-~~~~-------P--------------------------d~~g~-~s~~~ri~iG~~l~ 377 (538)
..++||+.|+|.++.++.++. ++|+ | +|+++ ++...|+++|+++.
T Consensus 276 ~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~ 355 (493)
T PRK15462 276 FSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLM 355 (493)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHH
Confidence 999999999999999887774 5665 2 22233 37778999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhccCCCCCCCCCccchhhHhHHHHHHHHHHHHHHhhhhHHHHHhhCCcchhhHHHHHHHHHH
Q 009308 378 TICCAVAWRVEVHRLIIINNKGLLGNTDEVIPMSIFWLAPQFCLLGLMKGLARDGINKFLADQFPEPMHDCVSAITELVT 457 (538)
Q Consensus 378 ~l~~~~~~~~e~~~~~~~~~~g~~~~~~~~~~~s~~~li~~~~l~glgE~l~~p~~~~~~~~~aP~~~rg~~~gl~~l~~ 457 (538)
++++++..+.... ..++ ..+|.+|++..|+++|+||++.+|.+++++.+.+|++++|++||+|++..
T Consensus 356 g~~f~~l~~~~~~----~~~~---------~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~ 422 (493)
T PRK15462 356 SAGFCILTLSARW----SAMY---------GHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLS 422 (493)
T ss_pred HHHHHHHHHHHhh----cCCC---------CCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 9999887764321 1111 25899999999999999999999999999999999999999999999955
Q ss_pred -HHHHHHHHHhhh-cccccccccC----CCcchhHHHHHHHHHHHHH--HHHHHhhhcccccCCCcc
Q 009308 458 -GFASFVNIVSVY-FNKSLFADTL----NSSRLDEYYKMLTIVSFIN--ICYFWWISTFYTRGGDTA 516 (538)
Q Consensus 458 -~iG~~l~~~l~~-~~~~~~~~~~----n~~~l~~~f~~la~l~~v~--~~~~~~~~~~~~~~~~~~ 516 (538)
++|+.+++.+.+ ...+-.+++. +...+..+|..++.++++. .+++.+.....++|+|.-
T Consensus 423 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (493)
T PRK15462 423 GAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALACVGVVLMIWLYQALKFRNRAL 489 (493)
T ss_pred HHHHHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 899999999988 4321000000 0123455777777766554 555666666677776553
No 6
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=100.00 E-value=2.9e-39 Score=348.60 Aligned_cols=410 Identities=11% Similarity=0.041 Sum_probs=301.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhccc--CCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHH
Q 009308 33 CFCKAALILLGLIFSHKLVDIAVVAVLITYLTDY--PRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYS 110 (538)
Q Consensus 33 ~~~~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~--l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~ 110 (538)
+.||.++.++..|++||++||++.++++.|++++ + |++..+++.+.+.+....+++++++|+++||++||||++.++
T Consensus 7 ~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~l-g~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~ 85 (475)
T TIGR00924 7 GHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGL-GFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLG 85 (475)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHH
Confidence 4789999999999999999999999999999987 9 999999999999999999999999999999966999999999
Q ss_pred HHHHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHH
Q 009308 111 TISCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIP 190 (538)
Q Consensus 111 ~~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~ 190 (538)
.+++.+|++++.++. +.+.++++|.+.|+|.|+++|+..++++|++|+ +++ +++++.++++|++
T Consensus 86 ~~~~~~g~~~~~~~~--------~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~-----~~~---~~r~~~~~~~~~~ 149 (475)
T TIGR00924 86 GIVLMLGHFMLAMSI--------YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYER-----GDM---PRRDGGFTLFYMS 149 (475)
T ss_pred HHHHHHHHHHHHhcc--------cHhHHHHHHHHHHhccccccCCHHHHHHHhcCC-----CCc---ccccceehhHHHH
Confidence 999999998888764 355778899999999999999999999999986 221 3467789999999
Q ss_pred HHHHHHHHHHh-------hhhhHHHHHHHHHHHHHHHHHHhcccceeeccCCCCCCCCchHHH-----H--HH----HHH
Q 009308 191 FFFSVIASVQL-------SSWRVISTFTVSATGITLFIFRLGIRFFHSTEITGPAAGSSLAVV-----F--RV----VKA 252 (538)
Q Consensus 191 ~niG~~i~~~~-------~g~~~~F~i~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~l~~~-----~--~v----~~~ 252 (538)
.|+|+++|+.+ .||++.|.++++.++++.++++..++.+++.++ ++++.++. . .. +..
T Consensus 150 ~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (475)
T TIGR00924 150 INIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGS----VPDPLSGQGKTYGKLLLALLAALAL 225 (475)
T ss_pred HHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCC----CCCCcchhhhhhHHHHHHHHHHHHH
Confidence 99999999886 599999999988888887777777666654332 22221110 0 00 000
Q ss_pred HHhhccCCCCCCCccccccccCcccccCCccccchhhhcccccCCCCCCCcccccccccccccchhhHHHHHHhHHHHHh
Q 009308 253 ALSKRHLNNPYSSNQLYRNDQNQVHLFPQVKFFRWLDKAAIIEPSTTLISPEEQEKAGRLCTVAQVRDTKLMLKMVPIWT 332 (538)
Q Consensus 253 a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~g~~~~~~~~~~~~ved~k~~l~~l~l~~ 332 (538)
..+.. ....+... .........-+....... .. ...+.+++| +++..+++++++
T Consensus 226 ~~~~~-~~~~~~~~--------------~~~~~~~~~~~~~~~~~~------~~----~~~~~~~~~-~~~~~~~l~l~~ 279 (475)
T TIGR00924 226 VFFCA-WLMHHVVI--------------ANILLMTVTLAVIIFFFR------LA----FKPRLDAVA-RNKMYAYIVLFL 279 (475)
T ss_pred HHHHH-HHHhccHH--------------HHHHHHHHHHHHHHHHHH------HH----HhccCCHHH-HhHHHHHHHHHH
Confidence 00100 00000000 000000000000000000 00 000122333 344556889999
Q ss_pred hhhhhHHhhccccchhhhhc-ccCCC-------c--------------------------ccCCCC-CchhHHHHHHHHH
Q 009308 333 TFVVFGLIVSTGQTFFPEQG-NQLNP-------K--------------------------EAKKKG-AKIVRIWAGMVLS 377 (538)
Q Consensus 333 ~~~~f~~~~~Q~~s~~~~q~-~~~~~-------P--------------------------d~~g~~-s~~~ri~iG~~l~ 377 (538)
+.++||+.|+|+.+.+..+. .++|+ | +|++++ +...|+++|+++.
T Consensus 280 ~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~ 359 (475)
T TIGR00924 280 EAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFC 359 (475)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHH
Confidence 99999999999999776543 33443 2 223333 7778999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhccCCCCCCCCCccchhhHhHHHHHHHHHHHHHHhhhhHHHHHhhCCcchhhHHHHHHHHHH
Q 009308 378 TICCAVAWRVEVHRLIIINNKGLLGNTDEVIPMSIFWLAPQFCLLGLMKGLARDGINKFLADQFPEPMHDCVSAITELVT 457 (538)
Q Consensus 378 ~l~~~~~~~~e~~~~~~~~~~g~~~~~~~~~~~s~~~li~~~~l~glgE~l~~p~~~~~~~~~aP~~~rg~~~gl~~l~~ 457 (538)
+++++.+++... ... ...++|+||+++++++.|+||++.+|.+++++++++|+++||+++|++.++.
T Consensus 360 ~~~~~~~~~~~~----~~~---------~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~ 426 (475)
T TIGR00924 360 GASFLTFAASIW----FAD---------AGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQ 426 (475)
T ss_pred HHHHHHHHHHHh----hcC---------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 999988876521 111 1236899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh-cccccccccCCCcchhHHHHHHHHHHHHHHHHHHhhhcccc
Q 009308 458 GFASFVNIVSVY-FNKSLFADTLNSSRLDEYYKMLTIVSFINICYFWWISTFYT 510 (538)
Q Consensus 458 ~iG~~l~~~l~~-~~~~~~~~~~n~~~l~~~f~~la~l~~v~~~~~~~~~~~~~ 510 (538)
++|+.+++.+.. ... ......+|..+++++++.++++++..|+.+
T Consensus 427 ~~g~~l~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (475)
T TIGR00924 427 AMGSLLGGYLATFGAV--------PQGVTGVFGKIGLVTLLVGVVMALMVPWLN 472 (475)
T ss_pred HHHHHHHHHHHHHHhc--------ccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988 322 112345788888888888888888887764
No 7
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=100.00 E-value=4.6e-37 Score=333.42 Aligned_cols=417 Identities=13% Similarity=0.096 Sum_probs=300.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHH
Q 009308 33 CFCKAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTI 112 (538)
Q Consensus 33 ~~~~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~ 112 (538)
+.||.++.++..+++||++||++.+.++.|+++++ |++.++++.+.+.+....+..++++|+++||++|||+++.++.+
T Consensus 18 ~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~l-g~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~ 96 (500)
T PRK09584 18 KQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQL-GMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAI 96 (500)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHH
Confidence 57788999999999999999999999999999999 99999999999999988899999999999996699999999999
Q ss_pred HHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHH
Q 009308 113 SCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFF 192 (538)
Q Consensus 113 ~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~n 192 (538)
++.+|+.++.++.. ....++++|.++++|.|+.+|+..++++|++|+ ++ .++++.++++|++.|
T Consensus 97 ~~~ig~~l~~~~~~-------~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~-----~~----~~~~~~~~~~~~~~~ 160 (500)
T PRK09584 97 VLAIGYALVAWSGH-------DAGIVYMGMATIAVGNGLFKANPSSLLSTCYEK-----DD----PRLDGAFTMYYMSIN 160 (500)
T ss_pred HHHHHHHHHHHhcc-------cHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCC-----Cc----hhhhhcchHHHHHHH
Confidence 99999888877531 245677899999999999999999999999976 21 234567899999999
Q ss_pred HHHHHHHHh-------hhhhHHHHHHHHHHHHHHHHHHhcccceeec--cCCCCCCCCchHH--HH----HHHHHHH-hh
Q 009308 193 FSVIASVQL-------SSWRVISTFTVSATGITLFIFRLGIRFFHST--EITGPAAGSSLAV--VF----RVVKAAL-SK 256 (538)
Q Consensus 193 iG~~i~~~~-------~g~~~~F~i~~~~~~l~~~~~~~~~~~~~~~--~p~~~~~~~~l~~--~~----~v~~~a~-~~ 256 (538)
+|+++|+.+ .||++.|.++++.++++++.++..++.+... +| +.+|... .. .+..... ..
T Consensus 161 iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (500)
T PRK09584 161 IGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKP----DFEPINYRKLLLTIVGVVALIAIAT 236 (500)
T ss_pred HHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCC----CccccchhhHHHHHHHHHHHHHHHH
Confidence 999999876 6999999999888888777766655444332 22 2222211 10 0100000 00
Q ss_pred ccCCCCCCCccccccccCcccccCCccccchhhhcccccCCCCCCCcccccccccccccchhhHHHHHHhHHHHHhhhhh
Q 009308 257 RHLNNPYSSNQLYRNDQNQVHLFPQVKFFRWLDKAAIIEPSTTLISPEEQEKAGRLCTVAQVRDTKLMLKMVPIWTTFVV 336 (538)
Q Consensus 257 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~g~~~~~~~~~~~~ved~k~~l~~l~l~~~~~~ 336 (538)
.....+.. .+..-...+.... .. .....+..++ +|+++.+..+++++..++
T Consensus 237 ~~~~~~~~-----------------~~~~~~~~~~~~~----------~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~i~ 287 (500)
T PRK09584 237 WLLHNQEI-----------------ARMALGVVALGIV----------VI-FGKEAFAMKG-AARRKMIVAFILMLEAII 287 (500)
T ss_pred HHHhcchH-----------------HHHHHHHHHHHHH----------HH-HHHHHhhcCH-HHHHHHHHHHHHHHHHHH
Confidence 00000000 0000000000000 00 0000112223 455556677778899999
Q ss_pred hHHhhccccchhhhhccc-CCC-------c-----------------------ccCCCC-CchhHHHHHHHHHHHHHHHH
Q 009308 337 FGLIVSTGQTFFPEQGNQ-LNP-------K-----------------------EAKKKG-AKIVRIWAGMVLSTICCAVA 384 (538)
Q Consensus 337 f~~~~~Q~~s~~~~q~~~-~~~-------P-----------------------d~~g~~-s~~~ri~iG~~l~~l~~~~~ 384 (538)
||+.+.|+++.+..|+.+ +|+ | .|.+++ ++.+|+++|+++.+++++++
T Consensus 288 f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l 367 (500)
T PRK09584 288 FFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVL 367 (500)
T ss_pred HHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHH
Confidence 999999999998887643 332 2 222322 67789999999999999987
Q ss_pred HHHHHHHHhhhhccCCCCCCCCCccchhhHhHHHHHHHHHHHHHHhhhhHHHHHhhCCcchhhHHHHHHHHHHHHHHHHH
Q 009308 385 WRVEVHRLIIINNKGLLGNTDEVIPMSIFWLAPQFCLLGLMKGLARDGINKFLADQFPEPMHDCVSAITELVTGFASFVN 464 (538)
Q Consensus 385 ~~~e~~~~~~~~~~g~~~~~~~~~~~s~~~li~~~~l~glgE~l~~p~~~~~~~~~aP~~~rg~~~gl~~l~~~iG~~l~ 464 (538)
.+.... ..++ ..+|.+|++++|+++|+||++++|.+++++++.+|+++||++||+|+++.++|+.++
T Consensus 368 ~~~~~~----~~~~---------~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~ 434 (500)
T PRK09584 368 PLGAKF----ANDA---------GIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIA 434 (500)
T ss_pred HHHHHh----cCCC---------CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 764311 1111 268999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhh-ccccc-cccc-CCCcchhHHHHHHHHHHHHHHHHHHhhhcccccC
Q 009308 465 IVSVY-FNKSL-FADT-LNSSRLDEYYKMLTIVSFINICYFWWISTFYTRG 512 (538)
Q Consensus 465 ~~l~~-~~~~~-~~~~-~n~~~l~~~f~~la~l~~v~~~~~~~~~~~~~~~ 512 (538)
+.+.+ ...+- ..+. ...+.+..+|..+++++++.++++++.+++.++.
T Consensus 435 g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~~~~k~ 485 (500)
T PRK09584 435 GYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTAPKLNRM 485 (500)
T ss_pred HHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99986 32100 0010 0112255678888888888888888888777553
No 8
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.97 E-value=2.6e-31 Score=278.19 Aligned_cols=325 Identities=22% Similarity=0.283 Sum_probs=215.9
Q ss_pred hHHHHHHHHHHHHhHHHHHhhhcccc-ccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceee
Q 009308 104 LNVIFYSTISCILGLVLLFITAFEEA-ASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSAR 182 (538)
Q Consensus 104 ~~~i~~~~~~~~~G~~ll~~~~~~~~-~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~ 182 (538)
+||+++|.+++.+|++++.+++.++. +++.+.+.++++++++++|+|++|||++++++|||++ ++ +.++++
T Consensus 1 yktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~-----~~---~~~~~~ 72 (372)
T PF00854_consen 1 YKTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDE-----DD---DSRRDS 72 (372)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSST-----TT---TTHHHH
T ss_pred CHhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcc-----cc---hhhhhh
Confidence 69999999999999999999987765 2344567899999999999999999999999999987 22 357889
Q ss_pred eehhhHHHHHHHHHHHHHh-------hhhhHHHHHHHHHHHHHHHHHHhcccceeec-cCCCCCCCCchHH-HHHHHHHH
Q 009308 183 KRVWWLIPFFFSVIASVQL-------SSWRVISTFTVSATGITLFIFRLGIRFFHST-EITGPAAGSSLAV-VFRVVKAA 253 (538)
Q Consensus 183 ~f~~~y~~~niG~~i~~~~-------~g~~~~F~i~~~~~~l~~~~~~~~~~~~~~~-~p~~~~~~~~l~~-~~~v~~~a 253 (538)
+|+|||+++|+|++++... +||.++|+++++.+++++++|+.++++|+.. +| .++++.+ ...++..+
T Consensus 73 ~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~----~~~~~~~~~~~~~~~~ 148 (372)
T PF00854_consen 73 FFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPP----GGSPLTNFIKLVLVAA 148 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S---------S--S--SHHHHHHH
T ss_pred hHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCcc----CCcccchhHHHHHHHH
Confidence 9999999999999999876 7999999999999999999999999999888 56 6777776 44444555
Q ss_pred HhhccCCCCCCCccccccccCcccccCCccccchhhhcccccCCCCCCCccccccccc-ccccchhhHHHHHHhHHHHHh
Q 009308 254 LSKRHLNNPYSSNQLYRNDQNQVHLFPQVKFFRWLDKAAIIEPSTTLISPEEQEKAGR-LCTVAQVRDTKLMLKMVPIWT 332 (538)
Q Consensus 254 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~g~~~~~~-~~~~~~ved~k~~l~~l~l~~ 332 (538)
.+++....+.....+++... ........+.....+ +.....+. . ..|. .++++++|+.|.+.+.+|.+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~------~--~~~~~~~~~~~~~~~k~~~~~~~~~~ 218 (372)
T PF00854_consen 149 FKKRKLAVPKGSSWLDWALF-QYSERSIFGIIVFIR-AAVIFFPE------I--FFWALFCQVQRVEELKALIRFLPIFL 218 (372)
T ss_dssp HHHHCCCH-HHHHHHHHHHH-HHCCCCCCCCCCHHH-HHHHHCCC------H--HHHTTTSSTTTHHHCCHHHCHHHCCC
T ss_pred HHHhhcccccchHHHHHhhh-hhhhhhhhhhhhhcc-chhhhhhh------h--hhcccCCccceeeeeeeeeeccccCe
Confidence 55544332211111111000 000000000000000 00000000 0 1121 245678888999999999999
Q ss_pred hhhhhHHhhccccchhhhhcccCCC--------c-------------------cc-------CCCC-CchhHHHHHHHHH
Q 009308 333 TFVVFGLIVSTGQTFFPEQGNQLNP--------K-------------------EA-------KKKG-AKIVRIWAGMVLS 377 (538)
Q Consensus 333 ~~~~f~~~~~Q~~s~~~~q~~~~~~--------P-------------------d~-------~g~~-s~~~ri~iG~~l~ 377 (538)
+.++|+.++.|..++...|..++|+ | |+ +++. ++++|+++|++++
T Consensus 219 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~l~~~n~i~iii~~pi~~~~~~p~~~~~~~~~~~~k~~~G~~~~ 298 (372)
T PF00854_consen 219 FWIFYWQMYSQLNTFFLLQVPQMDRGIGGLFGIPPAWLQSFNPIFIIIFIPILDRVVYPLLRRGIQPSPPQKFGIGMVFA 298 (372)
T ss_dssp HHHHHHHHCTCCHHHHHHCGGGTTT-SS------SGGGTTHHHHHCHHHHHHHHHHCCCTTTT------HHHHHHH-HHH
T ss_pred EEEEeeehhhhhhhHHHHhccccccccccccccccchhhhHHHHHHHHHHHHHHHHHhHHhhhcccchhhhhhhHHHHHH
Confidence 9999999999988888888777754 2 22 3333 8889999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhccCCCCCCCCCccchhhHhHHHHHHHHHHHHHHhhhhHHHHHhhCCcchhhHHHHHHHHHH
Q 009308 378 TICCAVAWRVEVHRLIIINNKGLLGNTDEVIPMSIFWLAPQFCLLGLMKGLARDGINKFLADQFPEPMHDCVSAITELVT 457 (538)
Q Consensus 378 ~l~~~~~~~~e~~~~~~~~~~g~~~~~~~~~~~s~~~li~~~~l~glgE~l~~p~~~~~~~~~aP~~~rg~~~gl~~l~~ 457 (538)
.+++++++.+|.+|.....+++ ..+.+|+++.|++++++|.+.++++.+.+++.+|+++++.++|+|+...
T Consensus 299 ~~~~~~~~~v~~~r~~~~~~~~---------~~~~~~~~~~~~~~~~~e~~l~~~g~~~~~~~a~~~~p~~m~~~~~~~~ 369 (372)
T PF00854_consen 299 ILAMFVAAIVEIRRLCYAQPCG---------KVSPWWQVPMYIFWLIPEYFLSGTGESAAYEFAPSRAPSSMMGIWFALS 369 (372)
T ss_dssp HHHHHTTTHHHH---HH----T---------T--THHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTT-SSSSTHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhcccccC---------CCChhhHHHHHHHHHHHHHHhhHHHHHHHHHhhHHhhhHHHHHHHHHHh
Confidence 9999999999987765544333 4566999999999999999999999998888888888888888877765
Q ss_pred HH
Q 009308 458 GF 459 (538)
Q Consensus 458 ~i 459 (538)
..
T Consensus 370 ~~ 371 (372)
T PF00854_consen 370 AF 371 (372)
T ss_dssp --
T ss_pred cc
Confidence 43
No 9
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.83 E-value=2.9e-18 Score=181.24 Aligned_cols=165 Identities=15% Similarity=0.125 Sum_probs=141.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHH
Q 009308 34 FCKAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTIS 113 (538)
Q Consensus 34 ~~~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~ 113 (538)
+|+ ++++...++.+++++.+.+.+..|+++++ |.+..+.|.+.+.......+..+++|+++||+ |||+++.++.++
T Consensus 10 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-g~k~~l~~~~~~ 85 (400)
T PRK11646 10 LGK--YFLLIDNMLVVLGFFVVFPLISIRFVDQL-GWAAVMVGIALGLRQFIQQGLGIFGGAIADRF-GAKPMIVTGMLM 85 (400)
T ss_pred ccH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-CchHHHHHHHHH
Confidence 455 67778999999999999999999999999 99999999999999999999999999999995 999999999999
Q ss_pred HHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHH
Q 009308 114 CILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFF 193 (538)
Q Consensus 114 ~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~ni 193 (538)
..++.+++.... +.+.++++|++.|++.|...|...+++.|.+|+ +++.+..++.+...++
T Consensus 86 ~~~~~~~~~~~~--------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~-----------~~~~~a~~~~~~~~~~ 146 (400)
T PRK11646 86 RAAGFATMAIAH--------EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRP-----------HQRGRFFSLLMMQDSA 146 (400)
T ss_pred HHHHHHHHHHhc--------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH-----------HHHHHHHHHHHHHHHH
Confidence 999988877653 467788999999999999999999999999865 2455677888888899
Q ss_pred HHHHHHHh------hhhhHHHHHHHHHHHHHHHH
Q 009308 194 SVIASVQL------SSWRVISTFTVSATGITLFI 221 (538)
Q Consensus 194 G~~i~~~~------~g~~~~F~i~~~~~~l~~~~ 221 (538)
|..+|+.+ .||++.|++.++..++..++
T Consensus 147 g~~ig~~l~g~l~~~g~~~~f~~~~~~~~~~~i~ 180 (400)
T PRK11646 147 GAVIGALLGSWLLQYDFRLVCATGAVLFVLAAAF 180 (400)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 98888776 68999998877666554433
No 10
>PRK10054 putative transporter; Provisional
Probab=99.83 E-value=3.4e-18 Score=180.46 Aligned_cols=167 Identities=11% Similarity=0.110 Sum_probs=143.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHH
Q 009308 33 CFCKAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTI 112 (538)
Q Consensus 33 ~~~~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~ 112 (538)
+.+|..+.++...++-.++++.+.+.++.|+++++ |++..+++++.+.+.....++.++.|+++||+ |||+++.++.+
T Consensus 4 ~~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~-g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~k~~~~~~~~ 81 (395)
T PRK10054 4 SLRRSTSALLASSLLLTIGRGATLPFMTIYLSRQY-SLSVDLIGYAMTIALTIGVVFSLGFGILADKF-DKKRYMLLAIT 81 (395)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhHHHHHH
Confidence 45688899999999999999999999999999999 99999999999999999999999999999995 99999999999
Q ss_pred HHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHH
Q 009308 113 SCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFF 192 (538)
Q Consensus 113 ~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~n 192 (538)
+..++.+++.+++ +.+.+++++.+.+.+.+...++..++.+|..++ +++.+.+++.+...|
T Consensus 82 ~~~~~~~~~~~~~--------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~g~~~~~~~ 142 (395)
T PRK10054 82 AFASGFIAIPLVN--------NVTLVVLFFALINCAYSVFSTVLKAWFADNLSS-----------TSKTKIFSLNYTMLN 142 (395)
T ss_pred HHHHHHHHHHHHh--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH-----------hHHHHHHHHHHHHHH
Confidence 9998888777654 455677778888888888888899999998765 245567788899999
Q ss_pred HHHHHHHHh------hhhhHHHHHHHHHHHHHHH
Q 009308 193 FSVIASVQL------SSWRVISTFTVSATGITLF 220 (538)
Q Consensus 193 iG~~i~~~~------~g~~~~F~i~~~~~~l~~~ 220 (538)
+|..+++.+ .||+..|.+.++..+++++
T Consensus 143 lg~~igp~l~~~l~~~g~~~~f~~~~~~~~i~~i 176 (395)
T PRK10054 143 IGWTVGPPLGTLLVMQSINLPFWLAAICSAFPLV 176 (395)
T ss_pred HHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHH
Confidence 999999876 5899999887776666543
No 11
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.82 E-value=3.1e-17 Score=172.76 Aligned_cols=168 Identities=17% Similarity=0.151 Sum_probs=132.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
|.+..+....+...++.....+.++.|+++++ |.|..+++++.+.+.....++.++.|+++||+ ||||++..+.+++.
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~-g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~ 92 (399)
T PRK05122 15 LRIVSIVMFTFISYLTIGLPLAVLPGYVHDQL-GFSAFLAGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLCGCA 92 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHHHHH
Confidence 66777778888888888878888899999899 99999999999999999999999999999995 99999999999988
Q ss_pred HhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHH
Q 009308 116 LGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSV 195 (538)
Q Consensus 116 ~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~ 195 (538)
++.+.+.++.........+...+++.|++.|+|.+...++..+++.|.+++ + ++.+..+++..+.++|.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~--------~---~r~~~~~~~~~~~~~g~ 161 (399)
T PRK05122 93 LSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGA--------L---HTGRVISWNGIATYGAL 161 (399)
T ss_pred HHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcCh--------h---hhccchhhhhhhhhHHH
Confidence 876665544321100001355789999999999999999999999999865 2 23455666666677777
Q ss_pred HHHHHh-------hhhhHHHHHHHHHHH
Q 009308 196 IASVQL-------SSWRVISTFTVSATG 216 (538)
Q Consensus 196 ~i~~~~-------~g~~~~F~i~~~~~~ 216 (538)
.+++.+ .||+..|.+..+..+
T Consensus 162 ~~g~~l~~~l~~~~g~~~~~~~~~~~~~ 189 (399)
T PRK05122 162 AIGAPLGVLLYHWGGLAGLGLLIMLLAL 189 (399)
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 666554 689988877655443
No 12
>PRK12382 putative transporter; Provisional
Probab=99.81 E-value=5.3e-17 Score=170.67 Aligned_cols=167 Identities=12% Similarity=0.141 Sum_probs=128.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHH
Q 009308 35 CKAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISC 114 (538)
Q Consensus 35 ~~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~ 114 (538)
++.++.+....++..++.....+.++.|+.+++ |.|.++.+.+.+.+.....++.++.|+++||+ ||||.+..+.+..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~l-g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~ 91 (392)
T PRK12382 14 NFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDL-GFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-GAKRSALQGMLAC 91 (392)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhc-CCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-cchHHHHHHHHHH
Confidence 356666667777777777777788888998889 99999999999999999999999999999995 9999999998887
Q ss_pred HHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHH
Q 009308 115 ILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFS 194 (538)
Q Consensus 115 ~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG 194 (538)
.++.+........+.....+...++++|++.|+|.+...+...+++.|.+|+ + ++.+..+++..+.++|
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~--------~---~r~~a~~~~~~~~~~g 160 (392)
T PRK12382 92 GLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGP--------K---HSGKVMSWNGMAMYGA 160 (392)
T ss_pred HHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCc--------c---ccchhhhHHHHHHHHH
Confidence 7765443332211100012467889999999999999999999999998865 2 3455667777778888
Q ss_pred HHHHHHh-------hhhhHHHHHHHHH
Q 009308 195 VIASVQL-------SSWRVISTFTVSA 214 (538)
Q Consensus 195 ~~i~~~~-------~g~~~~F~i~~~~ 214 (538)
..+++.+ .||+..+.+..+.
T Consensus 161 ~~~g~~~~~~l~~~~g~~~~~~~~~~~ 187 (392)
T PRK12382 161 LAAGAPLGLLLHSHFGFAALALTTMVL 187 (392)
T ss_pred HHHHHHHHHHHHhccChHHHHHHHHHH
Confidence 7777665 6888776655443
No 13
>PRK03545 putative arabinose transporter; Provisional
Probab=99.80 E-value=1.7e-16 Score=166.94 Aligned_cols=162 Identities=14% Similarity=0.094 Sum_probs=128.9
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHH
Q 009308 37 AALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCIL 116 (538)
Q Consensus 37 ~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~ 116 (538)
..+.+....++.....+ +...+.+.+.+++ |.+.++++++.+.+.....++.++.|+++||+ ||||.+..+.+++.+
T Consensus 10 ~~~~l~~~~~~~~~~~~-~~~~~~~~l~~~~-~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~ 86 (390)
T PRK03545 10 RVVTLALAAFIFNTTEF-VPVGLLSDIAQSF-HMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV-ERRKLLIGLFVLFIA 86 (390)
T ss_pred HHHHHHHHHHHHHhHHH-HHHcchHHHHhHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHHHHHH
Confidence 34445555555444444 3333345666779 99999999999999998899999999999995 999999999999999
Q ss_pred hHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHH
Q 009308 117 GLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVI 196 (538)
Q Consensus 117 G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~ 196 (538)
++++...+. +.+.++++|+++|++.+...|...+++.|.+|+ + +|.+..+++..+.++|..
T Consensus 87 ~~~~~~~~~--------~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~--------~---~r~~~~g~~~~~~~~g~~ 147 (390)
T PRK03545 87 SHVLSALAW--------NFTVLLISRIGIAFAHAIFWSITASLAIRVAPA--------G---KKAQALSLLATGTALAMV 147 (390)
T ss_pred HHHHHHHhc--------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh--------h---hhhhHHHHHHHHHHHHHH
Confidence 988877764 577899999999999999999999999999876 2 345667777888888888
Q ss_pred HHHHh-------hhhhHHHHHHHHHHHHHHH
Q 009308 197 ASVQL-------SSWRVISTFTVSATGITLF 220 (538)
Q Consensus 197 i~~~~-------~g~~~~F~i~~~~~~l~~~ 220 (538)
+++.+ .||++.|.+.++..++..+
T Consensus 148 ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~ 178 (390)
T PRK03545 148 LGLPLGRVIGQYLGWRTTFLAIGGGALITLL 178 (390)
T ss_pred HHhhHHHHHHHHhcHHHHHHHHHHHHHHHHH
Confidence 88765 6999999987766655443
No 14
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.77 E-value=3.7e-16 Score=164.84 Aligned_cols=162 Identities=10% Similarity=-0.011 Sum_probs=127.5
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHH
Q 009308 37 AALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCIL 116 (538)
Q Consensus 37 ~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~ 116 (538)
.....+...+++.+..+.....+ +.+.+++ |.+.++++++.+.+.....++.++.|+++||+ ||||++..+.++..+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~ 92 (406)
T PRK11551 16 TIGLCFLVALLEGLDLQSAGVAA-PRMAQEF-GLDVAQMGWAFSAGILGLLPGALLGGRLADRI-GRKRILIVSVALFGL 92 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHh-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHHHH
Confidence 33444455566665555443333 4555679 99999999999999999999999999999995 999999999999888
Q ss_pred hHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHH
Q 009308 117 GLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVI 196 (538)
Q Consensus 117 G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~ 196 (538)
+.++...+. +.+.+++.|++.|++.|...+...++++|.+|+ + ++....++++.+.++|.+
T Consensus 93 ~~~~~~~~~--------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~--------~---~r~~~~~~~~~~~~~g~~ 153 (406)
T PRK11551 93 FSLATAQAW--------DFPSLLVARLLTGVGLGGALPNLIALTSEAVGP--------R---LRGTAVSLMYCGVPFGGA 153 (406)
T ss_pred HHHHHHHhc--------cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCH--------H---HHHHHHHHHHHHHHHHHH
Confidence 877766653 467888999999999999999999999999875 2 345667788888899998
Q ss_pred HHHHh-------hhhhHHHHHHHHHHHHHHH
Q 009308 197 ASVQL-------SSWRVISTFTVSATGITLF 220 (538)
Q Consensus 197 i~~~~-------~g~~~~F~i~~~~~~l~~~ 220 (538)
+++.+ .+|+..|.+.++..++..+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (406)
T PRK11551 154 LASVIGVLAAGDAAWRHIFYVGGVGPLLLVP 184 (406)
T ss_pred HHHHHHHHHccccCHHHHHHHHHHHHHHHHH
Confidence 88765 5899999887665544433
No 15
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.77 E-value=2.9e-16 Score=166.63 Aligned_cols=169 Identities=13% Similarity=0.003 Sum_probs=125.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
|.+..++...++..++.......++.+. +++ +.+..+++++.+.+.....++.++.|+++||+ |||+.+..+.++..
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~ 93 (417)
T PRK10489 17 PAFRAVFIARFISIFGLGLLGVAVPVQI-QMM-TGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCG 93 (417)
T ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHH-HHH-HCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHH
Confidence 3444455567777777654555555555 457 78999999999999999999999999999995 99999999988888
Q ss_pred HhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHH
Q 009308 116 LGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSV 195 (538)
Q Consensus 116 ~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~ 195 (538)
++.+++....... ..+.+.+++.|++.|++.|...+...+++.|.+|+ + ++.+..++++.+.++|.
T Consensus 94 ~~~~~~~~~~~~~---~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------~---~~~~~~~~~~~~~~~g~ 159 (417)
T PRK10489 94 LGFIGLALNAFLP---EPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGR--------E---NLMQAGAITMLTVRLGS 159 (417)
T ss_pred HHHHHHHHHHHcC---CCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCH--------H---HHHHHHHHHHHHHhHHH
Confidence 8776654321100 01356788899999999999889999999998765 2 33455566677788888
Q ss_pred HHHHHh-------hhhhHHHHHHHHHHHHHHHH
Q 009308 196 IASVQL-------SSWRVISTFTVSATGITLFI 221 (538)
Q Consensus 196 ~i~~~~-------~g~~~~F~i~~~~~~l~~~~ 221 (538)
.+|+.+ .+|++.|.+..+..+++.+.
T Consensus 160 ~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (417)
T PRK10489 160 VISPALGGLLIAAGGVAWNYGLAAAGTFITLLP 192 (417)
T ss_pred HhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 887765 58999998877666655443
No 16
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.77 E-value=3e-16 Score=161.73 Aligned_cols=165 Identities=10% Similarity=-0.014 Sum_probs=134.2
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHH
Q 009308 40 ILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLV 119 (538)
Q Consensus 40 ~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ 119 (538)
.++...++..++.......++.|..+ + +.+..+.+++.+.+.....++.++.|+++||+ ||||++.++.++..++.+
T Consensus 3 ~l~~~~~~~~~~~~~~~~~~~~~~~~-~-~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~ 79 (365)
T TIGR00900 3 LLFAAQLISLIGTAITQVALPLYVLA-G-TGSASVLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVA 79 (365)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHH-h-hccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHH
Confidence 35567778888887777778888775 8 89999999999999999999999999999995 999999999999888877
Q ss_pred HHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHH
Q 009308 120 LLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASV 199 (538)
Q Consensus 120 ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~ 199 (538)
++......+ ..+.+.++++|++.|++.+...|...++++|.+|+ + ++.+.++++..+.++|.++++
T Consensus 80 ~~~~~~~~~---~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~--------~---~~~~~~~~~~~~~~~g~~~g~ 145 (365)
T TIGR00900 80 VLPFVALLG---GLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPE--------E---QLTQANSLSQAVRSLFYIVGP 145 (365)
T ss_pred HHHHHHHcC---CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH--------H---HHHHHHhHHHHHHHHHHHHHH
Confidence 766554211 01467889999999999999999999999999876 2 345677888888899988887
Q ss_pred Hh-------hhhhHHHHHHHHHHHHHHHH
Q 009308 200 QL-------SSWRVISTFTVSATGITLFI 221 (538)
Q Consensus 200 ~~-------~g~~~~F~i~~~~~~l~~~~ 221 (538)
.+ .||++.|.+.++..+++.+.
T Consensus 146 ~l~~~l~~~~g~~~~~~~~~~~~~~~~~~ 174 (365)
T TIGR00900 146 GIGGLMYATLGIKWAIWVDAVGFAISALL 174 (365)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 65 68999998877666555443
No 17
>PRK10504 putative transporter; Provisional
Probab=99.76 E-value=1.6e-15 Score=163.40 Aligned_cols=166 Identities=15% Similarity=0.066 Sum_probs=135.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
+.+|.+....++.-+..+.+.+.++.+.+ ++ |.+..+++++.+.+.....++.+++|+++||+ ||||.+..+..+..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~-g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~ 86 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQ-SL-GESPLHMHMVIVSYVLTVAVMLPASGWLADRV-GVRNIFFTAIVLFT 86 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHH-Hh-CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHH
Confidence 45677778888888888888887777776 59 99999999999999999999999999999995 99999999999988
Q ss_pred HhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHH
Q 009308 116 LGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSV 195 (538)
Q Consensus 116 ~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~ 195 (538)
++.++...+. +.+.++++|++.|+|.|...|...+++.|.+|+ + ++...++++....++|.
T Consensus 87 ~~~~~~~~~~--------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~--------~---~~~~~~~~~~~~~~~g~ 147 (471)
T PRK10504 87 LGSLFCALSG--------TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPR--------E---QYMAAMTFVTLPGQVGP 147 (471)
T ss_pred HHHHHHHHhC--------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCH--------H---HHHHHHHHHHHHHHHHH
Confidence 8887766543 466788999999999999999999999999875 2 33456677777778888
Q ss_pred HHHHHh-------hhhhHHHHHHHHHHHHHHHHHH
Q 009308 196 IASVQL-------SSWRVISTFTVSATGITLFIFR 223 (538)
Q Consensus 196 ~i~~~~-------~g~~~~F~i~~~~~~l~~~~~~ 223 (538)
.+++.+ .||++.|.+......++.+...
T Consensus 148 ~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~ 182 (471)
T PRK10504 148 LLGPALGGLLVEYASWHWIFLINIPVGIIGAIATL 182 (471)
T ss_pred HhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence 887765 6899999987666555544433
No 18
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.75 E-value=2.4e-15 Score=158.95 Aligned_cols=156 Identities=9% Similarity=0.083 Sum_probs=117.7
Q ss_pred HHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHh
Q 009308 44 LIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFI 123 (538)
Q Consensus 44 ~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~ 123 (538)
.+++..++.....+.++. +.+++ |.+..++++..+.+..+..++.++.|.++||+ ||||.+.++..+..++.++...
T Consensus 21 ~~~~~~~~~~~~~~~~~~-~~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~ 97 (406)
T PRK15402 21 FEFATYIANDMIQPGMLA-VVEDF-NAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGVAFFILTCLAILL 97 (406)
T ss_pred HHHHHHhhhhhHhcchHH-HHHHh-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHH
Confidence 333334444444444444 44679 99999999999999999999999999999995 9999999999999988887766
Q ss_pred hhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh--
Q 009308 124 TAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL-- 201 (538)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~-- 201 (538)
+. +.+.+++.|++.|++.+...+...+.+.|.+++ ++ +.+..++.+...++|..+++.+
T Consensus 98 ~~--------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~--------~~---~~~~~~~~~~~~~~~~~~g~~i~~ 158 (406)
T PRK15402 98 AQ--------SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEE--------AD---AIKITALMANVALLAPLLGPLVGA 158 (406)
T ss_pred Hc--------cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhCh--------hH---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 54 466788999999999999889999999999875 22 2233445555555666666554
Q ss_pred -----hhhhHHHHHHHHHHHHHHHH
Q 009308 202 -----SSWRVISTFTVSATGITLFI 221 (538)
Q Consensus 202 -----~g~~~~F~i~~~~~~l~~~~ 221 (538)
.+|++.|.+.++..+++.+.
T Consensus 159 ~l~~~~~w~~~~~~~~~~~~~~~~~ 183 (406)
T PRK15402 159 ALIHVLPWRGMFVLFAALAALSFFG 183 (406)
T ss_pred HHHHccCccHHHHHHHHHHHHHHHH
Confidence 68999998877666655543
No 19
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.75 E-value=8.3e-16 Score=161.96 Aligned_cols=163 Identities=14% Similarity=0.009 Sum_probs=127.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHH-----HHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVE-----AARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYS 110 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~-----a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~ 110 (538)
|....++...++..+++....+.++.|+++ + |.+..+ ++.+.+.+.....++.++.|+++||+ |||+++..+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~-g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~ 90 (408)
T PRK09874 14 RNLTVAWLGCFLTGAAFSLVMPFLPLYVEQ-L-GVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-GRKIMLLRS 90 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHH-h-CCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CcHHHHHHH
Confidence 556667778888888988888888888875 7 777554 47788888888999999999999995 999999999
Q ss_pred HHHHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHH
Q 009308 111 TISCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIP 190 (538)
Q Consensus 111 ~~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~ 190 (538)
.++..++.+++..+. +.+.++++|++.|++.+. .+...+++.|++++ + ++....+++..+
T Consensus 91 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~--------~---~~~~~~~~~~~~ 150 (408)
T PRK09874 91 ALGMGIVMVLMGLAQ--------NIWQFLILRALLGLLGGF-VPNANALIATQVPR--------N---KSGWALGTLSTG 150 (408)
T ss_pred HHHHHHHHHHHHHHh--------hHHHHHHHHHHHHHhhhh-HHhHHHHHHHhcCH--------h---hhhHHHHHHHHH
Confidence 999998887776653 467888999999998654 57777888888765 2 334555667777
Q ss_pred HHHHHHHHHHh-------hhhhHHHHHHHHHHHHHHHH
Q 009308 191 FFFSVIASVQL-------SSWRVISTFTVSATGITLFI 221 (538)
Q Consensus 191 ~niG~~i~~~~-------~g~~~~F~i~~~~~~l~~~~ 221 (538)
.++|.++++.+ .+|+..|.+.++..++..+.
T Consensus 151 ~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 188 (408)
T PRK09874 151 GVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLV 188 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 88888887765 68999998877766554443
No 20
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.75 E-value=1.1e-15 Score=155.98 Aligned_cols=337 Identities=14% Similarity=0.127 Sum_probs=221.3
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHH
Q 009308 40 ILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLV 119 (538)
Q Consensus 40 ~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ 119 (538)
.+....+++.++++.....++.|.+ ++ |.+..+.+.+.+.......++.++.|+++||+ ||||++.++.++..++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-g~r~~~~~~~~~~~~~~~ 79 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAE-DL-GLSASQAGLIVSAFSLGYALGSLLAGYLSDRF-GRRRVLLLGLLLFALGSL 79 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHH-Hc-CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchhhHHHHHHHHHHHH
Confidence 4456677888888877788877775 48 89999999999999999999999999999995 999999999999999998
Q ss_pred HHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHH
Q 009308 120 LLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASV 199 (538)
Q Consensus 120 ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~ 199 (538)
++.... +.+.++++|++.|++.+...+...++..|.+|+ + ++...+++.+.+.++|..+++
T Consensus 80 ~~~~~~--------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~--------~---~~~~~~~~~~~~~~~g~~~~~ 140 (352)
T cd06174 80 LLAFAS--------SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPP--------K---ERGRALGLFSAGFGLGALLGP 140 (352)
T ss_pred HHHHhc--------cHHHHHHHHHHHHcccccccHhHHHHHHHhCCc--------c---chhhhhhHHHHHHHHHHHHHH
Confidence 877763 467889999999999999999999999999875 2 345667778888899998887
Q ss_pred Hh-------hhhhHHHHHHHHHHHHHHHHHHhcccceeeccCCCCCCCCchHHHHHHHH-HHHhhccCCCCCCCcccccc
Q 009308 200 QL-------SSWRVISTFTVSATGITLFIFRLGIRFFHSTEITGPAAGSSLAVVFRVVK-AALSKRHLNNPYSSNQLYRN 271 (538)
Q Consensus 200 ~~-------~g~~~~F~i~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~l~~~~~v~~-~a~~~~~~~~~~~~~~l~~~ 271 (538)
.+ .+|+..|.+.++..+++.+...... | ....... ........ .
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~----------~~~~~~~~~~~~~~~~------~----- 192 (352)
T cd06174 141 LLGGLLAESLGWRWLFLILAILGLLLALLLLFLL-------R----------LLLLLALAFFLLSFGY------Y----- 192 (352)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH-------H----------HHHHHHHHHHHHHhHH------H-----
Confidence 76 5799999887777666555433211 1 0000000 00000000 0
Q ss_pred ccCcccccCCccccchhhhcccccCCCCCCCcccccccccccccchhhHHHHHHhHHHHHhhhhhhHHhhccccchhhhh
Q 009308 272 DQNQVHLFPQVKFFRWLDKAAIIEPSTTLISPEEQEKAGRLCTVAQVRDTKLMLKMVPIWTTFVVFGLIVSTGQTFFPEQ 351 (538)
Q Consensus 272 ~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~g~~~~~~~~~~~~ved~k~~l~~l~l~~~~~~f~~~~~Q~~s~~~~q 351 (538)
....++.... .+ . . ..++ ++...... ...+...+..... ..+.
T Consensus 193 -----------~~~~~~~~~~----~~------~----~-~~~~---~~~~~~~~--~~~~~~~i~~~~~----~~~~-- 235 (352)
T cd06174 193 -----------GLLTYLPLYL----QE------V----L-GLSA---AEAGLLLS--LFGLGGILGALLG----GLLS-- 235 (352)
T ss_pred -----------HHHHHHHHHH----HH------h----c-CCCH---HHHHHHHH--HHHHHHHHHHHHH----HHHH--
Confidence 0000000000 00 0 0 0001 11111111 1111111100000 0011
Q ss_pred cccCCCcccCCCCCchh-HHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCccchhhHhHHHHHHHHHHHHHHh
Q 009308 352 GNQLNPKEAKKKGAKIV-RIWAGMVLSTICCAVAWRVEVHRLIIINNKGLLGNTDEVIPMSIFWLAPQFCLLGLMKGLAR 430 (538)
Q Consensus 352 ~~~~~~Pd~~g~~s~~~-ri~iG~~l~~l~~~~~~~~e~~~~~~~~~~g~~~~~~~~~~~s~~~li~~~~l~glgE~l~~ 430 (538)
||.++ .+ .+.++.++..++....... .+.++.....++.++++....
T Consensus 236 -------~~~~~---~~~~~~~~~~~~~i~~~~~~~~----------------------~~~~~~~~~~~~~g~~~~~~~ 283 (352)
T cd06174 236 -------DRLGR---RRLLLLIGLLLAALGLLLLALA----------------------PSLALLLVALLLLGFGLGFAF 283 (352)
T ss_pred -------HHHHh---hhHHHHHHHHHHHHHHHHHHHh----------------------ccHHHHHHHHHHHHHHHhccc
Confidence 12222 12 3556766666666554432 125566778899999999999
Q ss_pred hhhHHHHHhhCCcchhhHHHHHHHHHHHHHHHHHHHhhh-cccccccccCCCcchhHHHHHHHHHHHHHHHHHH
Q 009308 431 DGINKFLADQFPEPMHDCVSAITELVTGFASFVNIVSVY-FNKSLFADTLNSSRLDEYYKMLTIVSFINICYFW 503 (538)
Q Consensus 431 p~~~~~~~~~aP~~~rg~~~gl~~l~~~iG~~l~~~l~~-~~~~~~~~~~n~~~l~~~f~~la~l~~v~~~~~~ 503 (538)
+....++.+..|++.|+..+|++.....+|+.+++.+.+ +.+ + ......|...+++.++..+++.
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~-----~---~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 284 PALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLD-----T---GGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred hhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----c---cCcchHHHHHHHHHHHHHHHhe
Confidence 999999999999999999999999999999999999998 443 1 1123345666666666555543
No 21
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.74 E-value=3.8e-16 Score=160.28 Aligned_cols=159 Identities=20% Similarity=0.165 Sum_probs=131.4
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHH
Q 009308 42 LGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLL 121 (538)
Q Consensus 42 ~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll 121 (538)
+...++..++.....+.++.++.+++ |.+..+.+++.+.+.....++.++.|+++||+ ||||++.++.++.+++.++.
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~ 79 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEEL-GLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF-GRRRVLIIGLLLFALGSLLL 79 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCS-TTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCeeeEeehhhhhhhHHHHh
Confidence 34556666777666666665888889 99999999999999999999999999999995 99999999999999995555
Q ss_pred HhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh
Q 009308 122 FITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL 201 (538)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~ 201 (538)
.++. +.+.++++|++.|+|.+...+...+++.|.+|+ + ++...+++...+.++|.++++.+
T Consensus 80 ~~~~--------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~--------~---~~~~~~~~~~~~~~~g~~~g~~l 140 (352)
T PF07690_consen 80 AFAS--------NFWLLLIARFLLGIGSGFFSPASNALIADWFPP--------E---ERGRAFGILSAGFSLGSILGPLL 140 (352)
T ss_dssp HHHC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCT--------C---CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhh--------hHHHHhhhccccccccccccccccccccccchh--------h---hhhhccccccchhhhhhhcccch
Confidence 5432 355899999999999999999999999999876 2 34566788888899999998776
Q ss_pred -------hhhhHHHHHHHHHHHHHHHH
Q 009308 202 -------SSWRVISTFTVSATGITLFI 221 (538)
Q Consensus 202 -------~g~~~~F~i~~~~~~l~~~~ 221 (538)
.||++.|.+.++..++..++
T Consensus 141 ~~~l~~~~~~~~~~~~~~~~~~~~~il 167 (352)
T PF07690_consen 141 GGFLISYFGWRWAFLISAILSLIAAIL 167 (352)
T ss_dssp HHHCCCHCHHCCHHHHHHHHHHHHHHH
T ss_pred hhhhhhccccccccccccchhhhhhhh
Confidence 58999999988888777664
No 22
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.73 E-value=2.5e-15 Score=157.63 Aligned_cols=147 Identities=10% Similarity=0.047 Sum_probs=127.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHH
Q 009308 33 CFCKAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTI 112 (538)
Q Consensus 33 ~~~~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~ 112 (538)
.++|.+++++...++..+++..+.+.++.|+. ++ |.|..+++++.+.+..+..+++++.|+++||+ ||||++..+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~-~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-g~k~~~~~~~~ 79 (381)
T PRK03633 3 TYTRPVLLLLCGLLLLTLAIAVLNTLVPLWLA-QE-HLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-GFNRSYYLASL 79 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH-Hc-CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHH
Confidence 35678899999999999999888888888887 59 99999999999999999999999999999995 99999999999
Q ss_pred HHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHH
Q 009308 113 SCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFF 192 (538)
Q Consensus 113 ~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~n 192 (538)
+..++.++...+. +.+.++++|++.|++.|...|...+.+.|..++ + ++.+.++++..+.+
T Consensus 80 ~~~~~~~~~~~~~--------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~--------~---~~~~~~~~~~~~~~ 140 (381)
T PRK03633 80 IFAAGCAGLGLMV--------GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTS--------R---NRGRLLAAYMMVYY 140 (381)
T ss_pred HHHHHHHHHHHhc--------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH--------H---HHHHHHHHHHHHHH
Confidence 9999988777654 477889999999999999988888888887654 2 34566778888899
Q ss_pred HHHHHHHHh
Q 009308 193 FSVIASVQL 201 (538)
Q Consensus 193 iG~~i~~~~ 201 (538)
+|..+|+.+
T Consensus 141 ~g~~~g~~~ 149 (381)
T PRK03633 141 LGTVLGQLL 149 (381)
T ss_pred HHHHHHHHH
Confidence 999999887
No 23
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.73 E-value=7.6e-16 Score=165.64 Aligned_cols=140 Identities=11% Similarity=-0.014 Sum_probs=109.2
Q ss_pred HHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHHHHH
Q 009308 60 ITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKRLIL 139 (538)
Q Consensus 60 ~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~~~ 139 (538)
...+.+++ |.+.++++++.+.+.....++.+++|+++||+ |||+++..+.++..++.++...+. +.+.++
T Consensus 42 ~~~i~~~~-g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~--------~~~~l~ 111 (455)
T TIGR00892 42 FKELQQIF-QATYSETAWISSIMLAVLYAGGPISSILVNRF-GCRPVVIAGGLLASLGMILASFSS--------NVIELY 111 (455)
T ss_pred HHHHHHHh-CcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc-CchHHHHhhHHHHHHHHHHHHHhh--------hHHHHH
Confidence 34555679 99999999999999988899999999999995 999999999999999888876654 344454
Q ss_pred H-HHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-------hhhhHHHHHH
Q 009308 140 I-GVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL-------SSWRVISTFT 211 (538)
Q Consensus 140 ~-~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~-------~g~~~~F~i~ 211 (538)
+ .|++.|+|.|...+...+.+.+.+++ ++....++.+.+.++|..+++.+ .||++.|.+.
T Consensus 112 ~~~~~l~G~~~~~~~~~~~~~~~~~~~~------------~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~ 179 (455)
T TIGR00892 112 LTAGFITGLGLAFNFQPSLTMLGKYFYR------------RRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLIL 179 (455)
T ss_pred HHHHHHHHhcchhhhhHHHHHHHHHHHh------------hHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHH
Confidence 4 46889999997666666777887743 23456677777888887777654 7999999988
Q ss_pred HHHHHHHHHH
Q 009308 212 VSATGITLFI 221 (538)
Q Consensus 212 ~~~~~l~~~~ 221 (538)
++..+++.+.
T Consensus 180 ~~~~~~~~v~ 189 (455)
T TIGR00892 180 GGLLLHCCVC 189 (455)
T ss_pred HHHHHHHHHH
Confidence 7776655443
No 24
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.71 E-value=3.9e-15 Score=154.36 Aligned_cols=143 Identities=13% Similarity=-0.070 Sum_probs=120.8
Q ss_pred HHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHHH
Q 009308 58 VLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKRL 137 (538)
Q Consensus 58 ~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~ 137 (538)
...+++.+++ |.+..+.+++.+.+.....++.++.|+++||+ |||+++.++.++..++.++...+. +.+.
T Consensus 15 ~~~~~~~~~~-g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~~--------~~~~ 84 (399)
T TIGR00893 15 FAAPMLQEDL-GLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQAFAG--------AYVS 84 (399)
T ss_pred HhHHHHHHhh-CCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHHHHHc--------CHHH
Confidence 4445677789 99999999999999999999999999999995 999999999999999988877764 4778
Q ss_pred HHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-------hhhhHHHHH
Q 009308 138 ILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL-------SSWRVISTF 210 (538)
Q Consensus 138 ~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~-------~g~~~~F~i 210 (538)
++++|++.|+|.|...+...+++.|.+|+ + ++...++++..+.++|.++++.+ .+|++.|.+
T Consensus 85 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~--------~---~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~ 153 (399)
T TIGR00893 85 LYILRVLLGAAEAPFFPGIILIVASWFPA--------S---ERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFII 153 (399)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHhCCH--------H---HHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHH
Confidence 99999999999999999999999999876 2 34566677788888888888765 689999988
Q ss_pred HHHHHHHHHHH
Q 009308 211 TVSATGITLFI 221 (538)
Q Consensus 211 ~~~~~~l~~~~ 221 (538)
.++..++..+.
T Consensus 154 ~~~~~~~~~~~ 164 (399)
T TIGR00893 154 EGVLGIIWGVL 164 (399)
T ss_pred HHHHHHHHHHH
Confidence 76665554443
No 25
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.71 E-value=2.6e-15 Score=155.24 Aligned_cols=144 Identities=13% Similarity=-0.012 Sum_probs=118.1
Q ss_pred HHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhH
Q 009308 56 VAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLK 135 (538)
Q Consensus 56 ~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~ 135 (538)
.+.+.+++.+++ |.+.++++++.+.+..+..++.++.|+++||+ |||+++.++.++..++.++...+. +.
T Consensus 22 ~~~~~~~~~~~~-~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-G~r~~~~~~~~~~~~~~~~~~~~~--------~~ 91 (377)
T TIGR00890 22 WTLLAPPLGRYF-GVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-GPRAVAMLGGILYGLGFTFYAIAD--------SL 91 (377)
T ss_pred hhhHHHHHHHHh-CCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-CccchhHHhHHHHHHHHHHHHHHH--------HH
Confidence 345677888889 99999999999999999999999999999995 999999999999999998877764 57
Q ss_pred HHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-------hhhhHHH
Q 009308 136 RLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL-------SSWRVIS 208 (538)
Q Consensus 136 ~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~-------~g~~~~F 208 (538)
+.++++|.+.|+|.|...+...+...+.+++ ++....+++..+.++|.+++..+ .||++.|
T Consensus 92 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f 159 (377)
T TIGR00890 92 AALYLTYGLASAGVGIAYGIALNTAVKWFPD------------KRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAF 159 (377)
T ss_pred HHHHHHHHHHhHHHHHHHHhHHHHHHHHcCc------------ccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHH
Confidence 7889999999999999888888888887653 23455677777888887765433 5899999
Q ss_pred HHHHHHHHHHHHH
Q 009308 209 TFTVSATGITLFI 221 (538)
Q Consensus 209 ~i~~~~~~l~~~~ 221 (538)
.+.++..++..+.
T Consensus 160 ~~~~~~~~~~~~~ 172 (377)
T TIGR00890 160 IYMGIIFLLVIVL 172 (377)
T ss_pred HHHHHHHHHHHHH
Confidence 9877666554443
No 26
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.70 E-value=1.5e-14 Score=150.31 Aligned_cols=160 Identities=11% Similarity=0.004 Sum_probs=119.2
Q ss_pred HHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHH-HHHHHHHhHHHH
Q 009308 43 GLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFY-STISCILGLVLL 121 (538)
Q Consensus 43 ~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~-~~~~~~~G~~ll 121 (538)
...++-.+++....+.++.|+++++ |.|.++.+.+.+.+.....+..++.|.++||+ ||||.+.. +..+..++.++.
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~-g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEV-RARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLF 81 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHccc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHH
Confidence 4567777888888899999999999 99999999999999999999999999999995 99887654 555555565555
Q ss_pred HhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh
Q 009308 122 FITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL 201 (538)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~ 201 (538)
..+. +.+.+++.|++.+.+.+...|...++..|..++ ++| .+....+....+.++|..+++.+
T Consensus 82 ~~~~--------~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~--------~~~-~~~~~~~~~~~~~~~g~~ig~~~ 144 (375)
T TIGR00899 82 AWNR--------NYFLLLVLGVLLSSFASTANPQLFALAREHADR--------TGR-EAVMFSSVMRAQISLAWVIGPPL 144 (375)
T ss_pred Hhcc--------hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhh--------cch-hhHHHHHHHHHHHhHHHHHhhhH
Confidence 5543 466777888888888887888888888887643 111 11112345556677888777665
Q ss_pred -------hhhhHHHHHHHHHHHHHHHH
Q 009308 202 -------SSWRVISTFTVSATGITLFI 221 (538)
Q Consensus 202 -------~g~~~~F~i~~~~~~l~~~~ 221 (538)
.||++.|.+.++..++..+.
T Consensus 145 ~~~l~~~~~~~~~f~~~~~~~~~~~~~ 171 (375)
T TIGR00899 145 AFWLALGFGFTVMFLTAALAFVLCGVL 171 (375)
T ss_pred HHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 68999999887766555443
No 27
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.70 E-value=1.7e-14 Score=162.02 Aligned_cols=155 Identities=13% Similarity=0.084 Sum_probs=121.4
Q ss_pred hHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchh
Q 009308 55 VVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLL 134 (538)
Q Consensus 55 ~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~ 134 (538)
+.+.+.+++.+++ +.+..+++++.+++.++..++.+++|+++||+ |||+++++++++..++.++..++. +
T Consensus 185 ~is~ilp~i~~~~-gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~-GRR~~lii~lil~~i~~ll~afa~--------s 254 (742)
T TIGR01299 185 VVGFVLPSAEKDL-CIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL-GRKQCLLICLSVNGFFAFFSSFVQ--------G 254 (742)
T ss_pred HHHHHHHHHHHHh-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHh--------h
Confidence 3455566777779 99999999999999999999999999999995 999999999999999888777654 4
Q ss_pred HHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-------------
Q 009308 135 KRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL------------- 201 (538)
Q Consensus 135 ~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~------------- 201 (538)
.+.++++|++.|+|.|+..|...++++|.+|+ + .+...++++..+..+|.++++.+
T Consensus 255 ~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~--------~---~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~ 323 (742)
T TIGR01299 255 YGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQ--------E---KRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQ 323 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH--------H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhc
Confidence 77889999999999999999999999999876 2 33445556566667777766542
Q ss_pred -------hhhhHHHHHHHHHHHHHHHHH--Hhccccee
Q 009308 202 -------SSWRVISTFTVSATGITLFIF--RLGIRFFH 230 (538)
Q Consensus 202 -------~g~~~~F~i~~~~~~l~~~~~--~~~~~~~~ 230 (538)
.+||+.|++.++..+++++.+ +.++|+|.
T Consensus 324 ~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL 361 (742)
T TIGR01299 324 MGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFF 361 (742)
T ss_pred cccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 258888888766655544432 33555554
No 28
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.70 E-value=1.4e-14 Score=157.63 Aligned_cols=162 Identities=10% Similarity=0.032 Sum_probs=126.5
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhH
Q 009308 39 LILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGL 118 (538)
Q Consensus 39 ~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~ 118 (538)
..+....++.-+..-.+. ...+.+.+++ |.+.++.+++.+.|..+...+.++.|+++||+ |||+++.++.+++.+|.
T Consensus 9 ~~~~~~~~~~~ld~tiv~-~a~p~i~~~l-~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-Grk~~l~~~~~~~~~~~ 85 (495)
T PRK14995 9 VIIVLVYIPVAIDATVLH-VAAPTLSMTL-GASGNELLWIIDIYSLVMAGMVLPMGALGDRI-GFKRLLMLGGTLFGLAS 85 (495)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHh-CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHH
Confidence 333444444444433333 3344556679 99999999999999999999999999999995 99999999999999999
Q ss_pred HHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHH
Q 009308 119 VLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIAS 198 (538)
Q Consensus 119 ~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~ 198 (538)
++...+. +.+.++++|+++|+|.|+..|...+.+.+.+++ ++ +|.++++++....++|..+|
T Consensus 86 ~~~~~a~--------~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~-------~~---~r~~~~g~~~~~~~~g~~~g 147 (495)
T PRK14995 86 LAAAFSP--------TASWLIATRALLAIGAAMIVPATLAGIRATFTE-------EK---QRNMALGVWAAVGSGGAAFG 147 (495)
T ss_pred HHHHHcC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-------HH---HHHHHHHHHHHHHHHHHHHH
Confidence 8888764 577899999999999999999888888787643 12 34567788888889998888
Q ss_pred HHh-------hhhhHHHHHHHHHHHHHHHH
Q 009308 199 VQL-------SSWRVISTFTVSATGITLFI 221 (538)
Q Consensus 199 ~~~-------~g~~~~F~i~~~~~~l~~~~ 221 (538)
+.+ .|||+.|++.....++.+++
T Consensus 148 p~lgg~l~~~~gwr~~f~i~~~~~~~~~~l 177 (495)
T PRK14995 148 PLVGGILLEHFYWGSVFLINVPIVLVVMGL 177 (495)
T ss_pred HHHHHHhhccCChHHHHHHHHHHHHHHHHH
Confidence 876 69999999876655554443
No 29
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.70 E-value=1e-14 Score=155.07 Aligned_cols=173 Identities=10% Similarity=-0.003 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
+.+|.+....++..+++....+.++.|+++++ |++..+++.+.+.+.....+++++.|+++||+ ||||++.++..+..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~-g~r~~~~~~~~~~~ 87 (420)
T PRK09528 10 PNYWIFSLFFFFFFFIWSSWFSFFPIWLHDIN-GLSGTDTGIIFSANSLFALLFQPLYGLISDKL-GLKKHLLWIISGLL 87 (420)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHH
Confidence 45667777888888888889999999999999 99999999999999999999999999999995 99999988777766
Q ss_pred HhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHH
Q 009308 116 LGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSV 195 (538)
Q Consensus 116 ~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~ 195 (538)
++...+......+ ........+..+.++..|...+...+...+..++ . ++ ++...++......++|.
T Consensus 88 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~---~~g~~~g~~~~~~~~g~ 154 (420)
T PRK09528 88 VLFGPFFIYVFAP----LLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-----V-SR---RSGFEYGRARMWGSLGW 154 (420)
T ss_pred HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-----H-Hh---hccccchhhHHhhhHHH
Confidence 5544322211000 0000112222233333333222322333333221 0 11 12234444455567777
Q ss_pred HHHHHh------hhhhHHHHHHHHHHHHHHHHHH
Q 009308 196 IASVQL------SSWRVISTFTVSATGITLFIFR 223 (538)
Q Consensus 196 ~i~~~~------~g~~~~F~i~~~~~~l~~~~~~ 223 (538)
.+++.+ .+|+..|.+.++..+++++.++
T Consensus 155 ~i~~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~ 188 (420)
T PRK09528 155 ALCAFIAGILFNINPQINFWLGSGSALILLVLLF 188 (420)
T ss_pred HHHHHHHHHHHhcCchHhHHHHHHHHHHHHHHHh
Confidence 776654 5899999887766665554443
No 30
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.69 E-value=2.1e-14 Score=153.41 Aligned_cols=154 Identities=9% Similarity=-0.099 Sum_probs=121.2
Q ss_pred HHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHH
Q 009308 43 GLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLF 122 (538)
Q Consensus 43 ~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~ 122 (538)
...++..+.-+.....++.+. +++ |.|.++++.+.+.+.....++.+++|+++||+ |||+.+.++.++..++.++..
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~-~~~-g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~~ 106 (434)
T PRK11663 30 LGYALFYFTRKSFNAAMPEML-ADL-GLSRSDIGLLATLFYITYGVSKFVSGIVSDRS-NARYFMGIGLIATGIINILFG 106 (434)
T ss_pred HHHHHHHHhhhhHHHhhHHHH-Hhc-CCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc-CCchhHHHHHHHHHHHHHHHH
Confidence 333333333333344444444 469 99999999999999999999999999999995 999999999999999988777
Q ss_pred hhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-
Q 009308 123 ITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL- 201 (538)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~- 201 (538)
.+. +.+.+++.|++.|++.|...+...++++|++++ + ++....++++.+.++|..+++.+
T Consensus 107 ~~~--------~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~--------~---~rg~~~~~~~~~~~~g~~~~~~~~ 167 (434)
T PRK11663 107 FSS--------SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSR--------T---ERGGWWAIWNTAHNVGGALIPLVV 167 (434)
T ss_pred HHh--------HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCH--------H---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 664 467788889999999999889999999999876 2 34556677788888999888764
Q ss_pred ------hhhhHHHHHHHHHHHHH
Q 009308 202 ------SSWRVISTFTVSATGIT 218 (538)
Q Consensus 202 ------~g~~~~F~i~~~~~~l~ 218 (538)
.||++.|.+.++..++.
T Consensus 168 ~~l~~~~gw~~~f~~~~i~~~~~ 190 (434)
T PRK11663 168 GAIALHYGWRYGMMIAGIIAIVV 190 (434)
T ss_pred HHHHHcccHHHHHHHHHHHHHHH
Confidence 69999998876655433
No 31
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.69 E-value=2.2e-14 Score=151.25 Aligned_cols=153 Identities=12% Similarity=0.094 Sum_probs=117.7
Q ss_pred HHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHh
Q 009308 44 LIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFI 123 (538)
Q Consensus 44 ~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~ 123 (538)
.-+..|-.++.+.+.++ .+.+++ |.|.++++++.+.+..+..++.++.|+++||+ |||+++..+..++++|.++..+
T Consensus 17 ~~~~~~~~~~~~~~~lp-~i~~~~-~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~~~ 93 (393)
T PRK09705 17 IGLNMRPLLTSVGPLLP-QLRQAS-GMSFSVAALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMREL 93 (393)
T ss_pred HHHHcchhhhccchhHH-HHHHHh-CCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHHHH
Confidence 33444445554554444 566679 99999999999999999999999999999995 9999999999999999998887
Q ss_pred hhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh--
Q 009308 124 TAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL-- 201 (538)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~-- 201 (538)
+. +...++++|++.|+|.|...+.....+.|.+++ ++..+.+.+..+.++|..++..+
T Consensus 94 a~--------~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~~------------~~~~~~g~~~~~~~~g~~~g~~~~~ 153 (393)
T PRK09705 94 YP--------QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQQ------------RTPLVMGLWSAALMGGGGLGAAITP 153 (393)
T ss_pred Cc--------chHHHHHHHHHHHhHHHHHhhhhhHHHHHHccc------------cchhHHHHHHHHHHHHHHHHHHHHH
Confidence 75 466889999999999999999999999888753 23455566666666666666554
Q ss_pred ------hhhhHHHHHHHHHHHHHH
Q 009308 202 ------SSWRVISTFTVSATGITL 219 (538)
Q Consensus 202 ------~g~~~~F~i~~~~~~l~~ 219 (538)
.+|+..+.+.++..++.+
T Consensus 154 ~l~~~~~~w~~~~~~~~~~~~~~~ 177 (393)
T PRK09705 154 WLVQHSETWYQTLAWWALPAVVAL 177 (393)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHH
Confidence 379988765444433333
No 32
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.69 E-value=2.4e-14 Score=152.09 Aligned_cols=156 Identities=11% Similarity=0.105 Sum_probs=125.9
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHh
Q 009308 38 ALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILG 117 (538)
Q Consensus 38 ~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G 117 (538)
....+...+.+.+.++.. ..+.+++.+++ |.++.+++.+.+.+.....++.++.|+++||+ |||+++.++.++..++
T Consensus 20 ~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~-~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~~~~~~ 96 (426)
T PRK12307 20 LFSAWLGYVFDGFDFMLI-FYIMYLIKADL-GLTDMEGAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIVAYSVG 96 (426)
T ss_pred HHHHHHHHHHHHhHHHHH-HHHHHHHHHHh-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHH
Confidence 344444555555555533 44556677789 99999999999999999999999999999995 9999999999999999
Q ss_pred HHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHH
Q 009308 118 LVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIA 197 (538)
Q Consensus 118 ~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i 197 (538)
.++..++. +.+.++++|++.|+|.|...+...+++.|.+|+ + ++....+++..+.++|.++
T Consensus 97 ~~~~~~~~--------~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~--------~---~r~~~~~~~~~~~~lg~~~ 157 (426)
T PRK12307 97 TGLSGLAS--------GVIMLTLSRFIVGMGMAGEYACASTYAVESWPK--------H---LKSKASAFLVSGFGIGNII 157 (426)
T ss_pred HHHHHHHh--------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCH--------h---HhhHhhhHHHHHHhHHHHH
Confidence 98877764 577899999999999999999999999999876 2 2345567777888889888
Q ss_pred HHHh-------hhhhHHHHHHHHHH
Q 009308 198 SVQL-------SSWRVISTFTVSAT 215 (538)
Q Consensus 198 ~~~~-------~g~~~~F~i~~~~~ 215 (538)
++.+ .||++.|.+..+..
T Consensus 158 ~~~l~~~l~~~~~w~~~f~i~~~~~ 182 (426)
T PRK12307 158 AAYFMPSFAEAYGWRAAFFVGLLPV 182 (426)
T ss_pred HHHHHHHHcccCCHHHHHHHHHHHH
Confidence 8765 69999998765433
No 33
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.69 E-value=1.6e-14 Score=151.22 Aligned_cols=162 Identities=12% Similarity=0.099 Sum_probs=130.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
+.+..++...+.+.+..+.+ +.....+.+++ |.+.++++++.+.+.....++.++.|+++||+ |||+++.++.++..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~-~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~~~~~~ 88 (405)
T TIGR00891 12 NAFSAAWLGWLLDAFDFFLV-ALVLAEVAGEF-GLTTVDAASLISAALISRWFGALMFGLWGDRY-GRRLPMVTSIVLFS 88 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHh-CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHH
Confidence 55556666777777777644 44445667789 99999999999999999999999999999995 99999999999999
Q ss_pred HhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHH
Q 009308 116 LGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSV 195 (538)
Q Consensus 116 ~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~ 195 (538)
++.++...+. +.+.++++|++.|+|.|...+...+++.|.+++ + ++....+++..+.++|.
T Consensus 89 ~~~~~~~~~~--------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~--------~---~~~~~~~~~~~~~~~g~ 149 (405)
T TIGR00891 89 AGTLACGFAP--------GYITMFIARLVIGIGMGGEYGSSAAYVIESWPK--------H---LRNKASGLLISGYAVGA 149 (405)
T ss_pred HHHHHHHHhc--------cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCCh--------h---hhhHHHHHHHHHHHHHH
Confidence 9888777654 467889999999999999999999999999876 2 34556677777888888
Q ss_pred HHHHHh-------hh--hhHHHHHHHHHHHHHH
Q 009308 196 IASVQL-------SS--WRVISTFTVSATGITL 219 (538)
Q Consensus 196 ~i~~~~-------~g--~~~~F~i~~~~~~l~~ 219 (538)
.+++.+ .+ |++.|.+.++..++.+
T Consensus 150 ~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~ 182 (405)
T TIGR00891 150 VVAAQVYSLVVPVWGDGWRALFFISILPIIFAL 182 (405)
T ss_pred HHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH
Confidence 888765 34 9999987655544443
No 34
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.69 E-value=4.8e-14 Score=148.78 Aligned_cols=156 Identities=15% Similarity=0.119 Sum_probs=121.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
|.++.++...++..++.......+... .+++ +.+..+.+++.+.+.....++.+++|+++||+ ||||++.++.+++.
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~-~~~~-~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~ 79 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIAL-LKEL-HYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKL 79 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHH-HHHc-CCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHH
Confidence 456677778888888766555555544 4568 88999999999999999999999999999995 99999999999999
Q ss_pred HhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHH
Q 009308 116 LGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSV 195 (538)
Q Consensus 116 ~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~ 195 (538)
++.+++.... + .++.|+++|++.|+..|...+++.|.+|+ +++.++.++.....++|.
T Consensus 80 ~~~~~~~~~~--------~---~~~~r~l~G~~~a~~~pa~~a~i~~~~~~-----------~~~~~a~~~~~~~~~~~~ 137 (393)
T PRK11195 80 LGCLLMLFGI--------H---PLLAYGLVGIGAAAYSPAKYGILTELLPG-----------EKLVKANGWMEGSTIAAI 137 (393)
T ss_pred HHHHHHHHHH--------H---HHHHHHHHHHHHHHHHHHHHHHHHHHcCH-----------HHHHHHHHHHHHHHHHHH
Confidence 8887765542 2 26789999999999999999999999986 245566677777777887
Q ss_pred HHHHHh------hhhhHHHHHHHHHHH
Q 009308 196 IASVQL------SSWRVISTFTVSATG 216 (538)
Q Consensus 196 ~i~~~~------~g~~~~F~i~~~~~~ 216 (538)
++|+.+ ..|+..+.+.+...+
T Consensus 138 ~~Gp~lgG~l~~~~~~~~~~i~~~~~~ 164 (393)
T PRK11195 138 LLGTVLGGALADPHAEAALAVCALIYL 164 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 877776 345555555444333
No 35
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.69 E-value=1.2e-14 Score=156.83 Aligned_cols=161 Identities=17% Similarity=0.191 Sum_probs=129.1
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhH
Q 009308 39 LILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGL 118 (538)
Q Consensus 39 ~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~ 118 (538)
..+....+..-+... +.....+.+.+++ |.+..+++++.+.+..+..++.++.|+++||+ |||+++.++.+++.++.
T Consensus 5 ~~~~~~~~~~~~~~~-~~~~~~p~~~~~~-g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~ 81 (485)
T TIGR00711 5 IVLMLGTFMAVLDST-IVNVAIPTIAGDL-GSSLSQVQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLGS 81 (485)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHhc-CCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHHH
Confidence 334445555555554 4445555666779 99999999999999999999999999999995 99999999999999999
Q ss_pred HHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHH
Q 009308 119 VLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIAS 198 (538)
Q Consensus 119 ~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~ 198 (538)
++...+. +...++++|++.|+|.|...|...+++.|.+|+ + ++...++++..+.++|..++
T Consensus 82 ~~~~~~~--------~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~--------~---~r~~~~~~~~~~~~~g~~~g 142 (485)
T TIGR00711 82 LLCGVAP--------NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPP--------E---KRGRAMAIWGLTVLVAPALG 142 (485)
T ss_pred HHHhCcC--------CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCH--------H---HHHHHHHHHHHHHHHHhhhh
Confidence 8877654 477889999999999999999999999999876 2 34566777788888888888
Q ss_pred HHh-------hhhhHHHHHHHHHHHHHHHH
Q 009308 199 VQL-------SSWRVISTFTVSATGITLFI 221 (538)
Q Consensus 199 ~~~-------~g~~~~F~i~~~~~~l~~~~ 221 (538)
+.+ .||++.|.+.....++..++
T Consensus 143 ~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~ 172 (485)
T TIGR00711 143 PTLGGWIIENYHWRWIFLINVPIGIIVVVV 172 (485)
T ss_pred hccHhHhccCcCceehhhhhhHHHHHHHHH
Confidence 765 69999998876655544443
No 36
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.69 E-value=2.6e-14 Score=154.61 Aligned_cols=162 Identities=8% Similarity=-0.035 Sum_probs=116.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
+.+......-++..+..+++. ++.+++.+++ |.+.++++++.+.+.....++.+++|+++||+ |||+++..+.++..
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~-gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-G~r~~~~~~~~~~~ 112 (476)
T PLN00028 36 RAFHLSWISFFTCFVSTFAAA-PLLPIIRDNL-NLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-GPRYGSAFLLMLTA 112 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHH
Confidence 344444444555555555544 4445667789 99999999998888888889999999999995 99999999999998
Q ss_pred HhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHH
Q 009308 116 LGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSV 195 (538)
Q Consensus 116 ~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~ 195 (538)
++.++...+. +...+++.|++.|++.+...+ ...+++|.+|+ + ++....+......|+|.
T Consensus 113 ~~~~~~~~~~--------s~~~l~~~r~l~G~~~~~~~~-~~~~i~~~~~~--------~---~rg~a~g~~~~~~~~g~ 172 (476)
T PLN00028 113 PAVFCMSLVS--------SATGFIAVRFFIGFSLATFVS-CQYWMSTMFNG--------K---IVGTANGIAAGWGNLGG 172 (476)
T ss_pred HHHHHHHHhc--------CHHHHHHHHHHHHHHHHhhHH-HHHHHHHhcCh--------h---heeHHHHHHHHHHHHHH
Confidence 8887776654 466788899999999887543 45678898875 2 34455555555556666
Q ss_pred HHHHH----h------------hhhhHHHHHHHHHHHHHHH
Q 009308 196 IASVQ----L------------SSWRVISTFTVSATGITLF 220 (538)
Q Consensus 196 ~i~~~----~------------~g~~~~F~i~~~~~~l~~~ 220 (538)
.++.. + .|||+.|.+.+++.++..+
T Consensus 173 ~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l 213 (476)
T PLN00028 173 GVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGI 213 (476)
T ss_pred HHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHH
Confidence 55533 2 2799999987766654443
No 37
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.68 E-value=3.8e-14 Score=153.59 Aligned_cols=159 Identities=13% Similarity=0.128 Sum_probs=127.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
+.+..+....+...+.+..+ ..+.+++.+++ |.+..+++++.+.+..+..++.+++|+++||+ |||+++.++.++..
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~ 96 (496)
T PRK03893 20 KAFSAAWLGYLLDGFDFVLI-TLVLTEVQGEF-GLTTVQAASLISAAFISRWFGGLLLGAMGDRY-GRRLAMVISIVLFS 96 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHh-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHH
Confidence 33445555555666665544 45556677789 99999999999999999999999999999995 99999999999999
Q ss_pred HhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHH
Q 009308 116 LGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSV 195 (538)
Q Consensus 116 ~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~ 195 (538)
++.+++.++. +.+.++++|++.|++.++..+...+++.|.+++ + ++....+.++.+.++|.
T Consensus 97 ~~~~~~~~~~--------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~--------~---~r~~~~~~~~~~~~~g~ 157 (496)
T PRK03893 97 VGTLACGFAP--------GYWTLFIARLVIGMGMAGEYGSSATYVIESWPK--------H---LRNKASGFLISGFSIGA 157 (496)
T ss_pred HHHHHHHHHh--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH--------H---HHHHHHHHHHHHHHHHH
Confidence 9988877764 577889999999999999999999999999876 2 33455677778888999
Q ss_pred HHHHHh-------hhhhHHHHHHHHHHH
Q 009308 196 IASVQL-------SSWRVISTFTVSATG 216 (538)
Q Consensus 196 ~i~~~~-------~g~~~~F~i~~~~~~ 216 (538)
++++.+ .||++.|.+.++..+
T Consensus 158 ~~~~~~~~~l~~~~~w~~~f~~~~~~~~ 185 (496)
T PRK03893 158 VVAAQVYSLVVPVWGWRALFFIGILPII 185 (496)
T ss_pred HHHHHHHHHHhccCCHHHHHHHHHHHHH
Confidence 888775 689999987544433
No 38
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.68 E-value=1.3e-13 Score=146.57 Aligned_cols=138 Identities=13% Similarity=0.054 Sum_probs=112.5
Q ss_pred hcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHHHHHHHH
Q 009308 63 LTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKRLILIGV 142 (538)
Q Consensus 63 l~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l 142 (538)
+.+++ +.+.+++++..+.+..+..++.++.|+++||+ |||+++..+..++.++.++...+. +...++++|
T Consensus 42 i~~~~-~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~--------~~~~l~~~r 111 (413)
T PRK15403 42 VVRDF-NADVSLAPASVSLYLAGGMALQWLLGPLSDRI-GRRPVLITGALIFTLACAATLFTT--------SMTQFLIAR 111 (413)
T ss_pred HHHHh-CCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-CchHHHHHHHHHHHHHHHHHHHcC--------CHHHHHHHH
Confidence 44568 99999999999999999999999999999995 999999999999999888777654 477889999
Q ss_pred HHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-------hhhhHHHHHHHHHH
Q 009308 143 VLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL-------SSWRVISTFTVSAT 215 (538)
Q Consensus 143 ~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~-------~g~~~~F~i~~~~~ 215 (538)
+++|+|.+...+...+.+.|.+++ + ++.+..+++..+.++|..+|+.+ .||++.|.+.++..
T Consensus 112 ~l~Gi~~~~~~~~~~~~~~~~~~~--------~---~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~ 180 (413)
T PRK15403 112 FIQGTSICFIATVGYVTVQEAFGQ--------T---KGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMG 180 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCH--------H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 999999988777777888898875 2 23344566677777888777665 58999998877766
Q ss_pred HHHHHH
Q 009308 216 GITLFI 221 (538)
Q Consensus 216 ~l~~~~ 221 (538)
+++.+.
T Consensus 181 ~i~~~~ 186 (413)
T PRK15403 181 LIAFVG 186 (413)
T ss_pred HHHHHH
Confidence 655543
No 39
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.68 E-value=1.4e-13 Score=143.48 Aligned_cols=162 Identities=14% Similarity=0.056 Sum_probs=127.1
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhH
Q 009308 39 LILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGL 118 (538)
Q Consensus 39 ~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~ 118 (538)
+.+....+...++.....+.+ +.+.+++ |.+.++++++.+.+.....++.++.|+++||+ |||+++..+.++..++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~-p~~~~~~-g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~ 84 (385)
T TIGR00710 8 LLLGCLSILGPLGIDMYLPAF-PEIAADL-STPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFIFALSS 84 (385)
T ss_pred HHHHHHHHHHHHHHHHhcccH-HHHHHHh-CCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHHHHHH
Confidence 334444455556655444444 4556679 99999999999999999999999999999995 99999999999999988
Q ss_pred HHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHH
Q 009308 119 VLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIAS 198 (538)
Q Consensus 119 ~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~ 198 (538)
++...+. +.+.++++|++.|++.+...+...+++.|.+|+ + ++.+.+++++...++|..++
T Consensus 85 ~~~~~~~--------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~--------~---~~~~~~~~~~~~~~~g~~~g 145 (385)
T TIGR00710 85 LGLALSN--------NIETLLVLRFVQAFGASAGSVISQALVRDIYPG--------E---ELSRIYSILMPVLALAPAVA 145 (385)
T ss_pred HHHHHHc--------cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCc--------H---HHHHHHHHHHHHHHHHHHHH
Confidence 8877654 467888999999999999999999999999876 2 34456677777778877777
Q ss_pred HHh-------hhhhHHHHHHHHHHHHHHHHH
Q 009308 199 VQL-------SSWRVISTFTVSATGITLFIF 222 (538)
Q Consensus 199 ~~~-------~g~~~~F~i~~~~~~l~~~~~ 222 (538)
+.+ .+|+..|.+.++..++..+..
T Consensus 146 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 176 (385)
T TIGR00710 146 PLLGGYILVWLSWHAIFAFLSLAGILLSALI 176 (385)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 664 589999988766655544443
No 40
>TIGR00895 2A0115 benzoate transport.
Probab=99.67 E-value=6.5e-14 Score=146.03 Aligned_cols=158 Identities=13% Similarity=0.092 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHh
Q 009308 38 ALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILG 117 (538)
Q Consensus 38 ~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G 117 (538)
....+...+...+.+. ......+++.+++ |.+..+++.+.+.+.....++.++.|+++||+ |||+++..+.++..++
T Consensus 19 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~ 95 (398)
T TIGR00895 19 IILSFLIMLMDGYDLA-AMGFAAPAISAEW-GLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWSILLFSVF 95 (398)
T ss_pred HHHHHHHHHHHHHHHH-HHHhhHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHHHHHHHHH
Confidence 3333344444444444 3444556666779 99999999999999999999999999999995 9999999999999988
Q ss_pred HHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHH
Q 009308 118 LVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIA 197 (538)
Q Consensus 118 ~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i 197 (538)
.+++.... +.+.+++++++.|++.|...+...++++|.+|+ + ++....+++..+.++|..+
T Consensus 96 ~~~~~~~~--------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------~---~r~~~~~~~~~~~~~g~~~ 156 (398)
T TIGR00895 96 TLLCALAT--------NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPK--------R---FRGTAVGLMFCGYPIGAAV 156 (398)
T ss_pred HHHHHHcc--------chHHHHHHHHHHhcccccchhhHHHHHHHHcCH--------H---hhchhHhhHhhHHHHHHHH
Confidence 87776653 466788999999999999999999999999875 2 3455667777788888888
Q ss_pred HHHh-------hhhhHHHHHHHHHHHH
Q 009308 198 SVQL-------SSWRVISTFTVSATGI 217 (538)
Q Consensus 198 ~~~~-------~g~~~~F~i~~~~~~l 217 (538)
++.+ .||+..|.+.++..++
T Consensus 157 ~~~~~~~l~~~~g~~~~~~~~~~~~~~ 183 (398)
T TIGR00895 157 GGFLAGWLIPVFGWRSLFYVGGIAPLL 183 (398)
T ss_pred HHHHHHHHhhcccceeehhhhhhHHHH
Confidence 7765 6899888877544433
No 41
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.67 E-value=1.8e-13 Score=144.50 Aligned_cols=147 Identities=15% Similarity=0.166 Sum_probs=120.5
Q ss_pred HHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccc
Q 009308 51 VDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAA 130 (538)
Q Consensus 51 ~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~ 130 (538)
.-|...+.++.+ .+++ |.+.++++...+.+.....++.++.|.++||+ ||||.+..+.++..++.++...+.
T Consensus 35 ~~~~~~~~l~~~-~~~~-g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~----- 106 (394)
T PRK10213 35 VEFLPVSLLTPM-AQDL-GISEGVAGQSVTVTAFVAMFASLFITQTIQAT-DRRYVVILFAVLLTLSCLLVSFAN----- 106 (394)
T ss_pred HHHHHHhhHHHH-HHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcHHHHHHHHHHHHHHHHHHHHHC-----
Confidence 334445555554 4569 99999999999999999999999999999995 999999999999999888877653
Q ss_pred cchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-------hh
Q 009308 131 SPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL-------SS 203 (538)
Q Consensus 131 ~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~-------~g 203 (538)
+.+.+++.|++.|++.|...|...+++.|.+|+ +++....+++..+.++|.++++.+ .|
T Consensus 107 ---~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~-----------~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~g 172 (394)
T PRK10213 107 ---SFSLLLIGRACLGLALGGFWAMSASLTMRLVPP-----------RTVPKALSVIFGAVSIALVIAAPLGSFLGELIG 172 (394)
T ss_pred ---hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCH-----------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 578999999999999999999999999999876 234556677777788888888776 69
Q ss_pred hhHHHHHHHHHHHHHH
Q 009308 204 WRVISTFTVSATGITL 219 (538)
Q Consensus 204 ~~~~F~i~~~~~~l~~ 219 (538)
|++.|.+.++..++..
T Consensus 173 w~~~f~~~~~l~~~~~ 188 (394)
T PRK10213 173 WRNVFNAAAVMGVLCI 188 (394)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999988765554433
No 42
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.67 E-value=1.1e-13 Score=145.33 Aligned_cols=164 Identities=11% Similarity=0.149 Sum_probs=131.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHH
Q 009308 35 CKAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISC 114 (538)
Q Consensus 35 ~~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~ 114 (538)
++.++.+....+.-..+.+...+.++. +.+++ |.+.+++++..+.+..+..++.++.|+++||+ |||+++..+..+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~-g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~ 78 (382)
T PRK10091 2 KKVILSLALGTFGLGMAEFGIMGVLTE-LAHDV-GISIPAAGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALC 78 (382)
T ss_pred cchHHHHHHHHHHHHhhHHHHHhChHH-HHHHc-CCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHH
Confidence 355666777777777777766666654 55679 99999999999999999999999999999995 9999999999999
Q ss_pred HHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHH
Q 009308 115 ILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFS 194 (538)
Q Consensus 115 ~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG 194 (538)
.++.++...+. +.+.++++|++.|++.|...+...+++.|.+++ + ++.+..+.+..+.++|
T Consensus 79 ~~~~~l~~~~~--------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~--------~---~~~~~~~~~~~~~~~g 139 (382)
T PRK10091 79 VIGNAMFTLSS--------SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKP--------G---KVTAAVAGMVSGMTVA 139 (382)
T ss_pred HHHHHHHHHhC--------cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCh--------H---HhhHHHHHHHHHHHHH
Confidence 99998877764 578899999999999999888888888888765 2 2334556666677777
Q ss_pred HHHHHHh-------hhhhHHHHHHHHHHHHHHH
Q 009308 195 VIASVQL-------SSWRVISTFTVSATGITLF 220 (538)
Q Consensus 195 ~~i~~~~-------~g~~~~F~i~~~~~~l~~~ 220 (538)
..+++.+ .|||+.|.+.++..++..+
T Consensus 140 ~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~ 172 (382)
T PRK10091 140 NLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLA 172 (382)
T ss_pred HHHhccHHHHHhhhccHHHHHHHHHHHHHHHHH
Confidence 7776554 6999999987766554443
No 43
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.67 E-value=1.3e-13 Score=149.68 Aligned_cols=168 Identities=11% Similarity=0.007 Sum_probs=114.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHH-HHHH-----HHHHHHHHHHHHHHhhhhhhccCCchHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVE-AARL-----VNLQEGISASTVIFLTCIPDAFSGRLNVIFY 109 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~-a~~i-----~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~ 109 (538)
+.........++|-+-+. +.+...+++.+.+ +.+..+ .+.+ .+....+..+++++.|+++||+ |||+++.+
T Consensus 16 ~~~~~~~~g~~~~~~d~~-~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~ 92 (490)
T PRK10642 16 KAITAASLGNAMEWFDFG-VYGFVAYALGKVF-FPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-GRQKILAI 92 (490)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhh-CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHH
Confidence 344455566777766554 5566667777766 433322 1221 3445566778899999999995 99999999
Q ss_pred HHHHHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHH
Q 009308 110 STISCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLI 189 (538)
Q Consensus 110 ~~~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~ 189 (538)
+.+++.++.++..++.....-.-....+++++|+++|+|.|+..++..++++|.+|+ ++| ..+.++...
T Consensus 93 ~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~--------~~R---g~~~~~~~~ 161 (490)
T PRK10642 93 TIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPD--------RKR---GFMGSWLDF 161 (490)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCC--------CCC---cHHHHHHHH
Confidence 999999999888776421100000012488999999999999999999999999986 233 334556666
Q ss_pred HHHHHHHHHHHh---------------hhhhHHHHHHHHHHHH
Q 009308 190 PFFFSVIASVQL---------------SSWRVISTFTVSATGI 217 (538)
Q Consensus 190 ~~niG~~i~~~~---------------~g~~~~F~i~~~~~~l 217 (538)
+.++|..++..+ .|||+.|++.++..++
T Consensus 162 ~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~ 204 (490)
T PRK10642 162 GSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGII 204 (490)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH
Confidence 667777666432 4899999987654443
No 44
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.67 E-value=3.4e-14 Score=148.60 Aligned_cols=143 Identities=10% Similarity=0.023 Sum_probs=107.3
Q ss_pred HHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhH
Q 009308 56 VAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLK 135 (538)
Q Consensus 56 ~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~ 135 (538)
.++..+.+.+++ |.|.++.+++.+.+..+..++.++.|+++||+ |||+++..+......+.+. ..+. .+.
T Consensus 10 ~~~~lp~i~~~~-~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~-~~~~-------~~~ 79 (368)
T TIGR00903 10 FSPVLSLVAEDI-DVSKEELGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAAGR-LLDP-------FNY 79 (368)
T ss_pred HHhhHHHHHHHh-CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHHH-HHHh-------ccH
Confidence 344455666679 99999999999999999999999999999996 9998877665555554332 2221 147
Q ss_pred HHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-------hhhhHHH
Q 009308 136 RLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL-------SSWRVIS 208 (538)
Q Consensus 136 ~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~-------~g~~~~F 208 (538)
..++++|++.|+|.|.. ++..+..+|.+|+ + +|.+..+++..+.++|.++++.+ .|||..|
T Consensus 80 ~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~--------~---~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f 147 (368)
T TIGR00903 80 EWLLACQLLAALGQPFL-LNAFAPAASQIRE--------E---RRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLI 147 (368)
T ss_pred HHHHHHHHHHHhHhHHH-HHHHHHHHHHcCH--------H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHH
Confidence 78999999999999974 5555666888875 2 44566788888899999998765 6999999
Q ss_pred HHHHHHHHHHHH
Q 009308 209 TFTVSATGITLF 220 (538)
Q Consensus 209 ~i~~~~~~l~~~ 220 (538)
.+.++..++..+
T Consensus 148 ~~~~~l~~~~~~ 159 (368)
T TIGR00903 148 IPIAAVAAAGII 159 (368)
T ss_pred HHHHHHHHHHHH
Confidence 885555444333
No 45
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.66 E-value=4.3e-14 Score=150.73 Aligned_cols=134 Identities=16% Similarity=0.343 Sum_probs=110.1
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhc
Q 009308 70 YNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGK 149 (538)
Q Consensus 70 ~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~ 149 (538)
.+..+++++.+.+..+..++.++.|+++||+ |||+++.++.++..++.++....... .+.+.++++|++.|+|.
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~r~l~G~~~ 141 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDRF-GRKKSLLIIALLFVIGAILMGLAAFA-----LSVEMLIVGRVLLGIGV 141 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhhh-hhHHHHHHHHHHHHHHHHHHHHhccc-----cchHHHHHHHHHHHhhh
Confidence 4589999999999999999999999999995 99999999999999998887654321 13458899999999999
Q ss_pred hhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh----------hhhhHHHHHHHHHHHHHH
Q 009308 150 AGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL----------SSWRVISTFTVSATGITL 219 (538)
Q Consensus 150 g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~----------~g~~~~F~i~~~~~~l~~ 219 (538)
|...+...++++|.+++ + ++....++++.+.++|.++++.+ .+|++.|.+.++..++..
T Consensus 142 ~~~~~~~~~~i~~~~~~--------~---~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~ 210 (481)
T TIGR00879 142 GIASALVPMYLSEIAPK--------A---LRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLF 210 (481)
T ss_pred hHHHhHHHHHHHccCCh--------h---hhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHH
Confidence 99999999999999876 2 34556677788888888888664 589999998665555444
Q ss_pred H
Q 009308 220 F 220 (538)
Q Consensus 220 ~ 220 (538)
+
T Consensus 211 ~ 211 (481)
T TIGR00879 211 L 211 (481)
T ss_pred H
Confidence 3
No 46
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.66 E-value=1e-13 Score=146.04 Aligned_cols=170 Identities=9% Similarity=0.017 Sum_probs=123.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
|.+|.+....++.-.++..+.+.++.|+++++ |++..+++.+.+.+.....++.++.|+++||+ ||||.+..+.....
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~ 79 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVN-GLSKTDTGIVFSCISLFSILFQPLFGLISDKL-GLKKHLLWIISGLL 79 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHH
Confidence 55677778888888899889999999999999 99999999999999999999999999999995 99999998877776
Q ss_pred HhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHH
Q 009308 116 LGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSV 195 (538)
Q Consensus 116 ~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~ 195 (538)
++...+......+.........+.+++++.+++.+...|....+..|..++ ....++......++|.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------------~~~~~g~~~~~~~~g~ 146 (396)
T TIGR00882 80 VLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSRN-------------SNFEYGKARMFGCVGW 146 (396)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhhh-------------cccccchhhhhcccHH
Confidence 654432211100000000123456667888888888888887777664221 1123455556677887
Q ss_pred HHHHHh------hhhhHHHHHHHHHHHHHHH
Q 009308 196 IASVQL------SSWRVISTFTVSATGITLF 220 (538)
Q Consensus 196 ~i~~~~------~g~~~~F~i~~~~~~l~~~ 220 (538)
.+++.+ .+|+..|.+.++..++..+
T Consensus 147 ~~g~~~~g~l~~~~~~~~f~~~~~~~~~~~~ 177 (396)
T TIGR00882 147 ALCASIAGILFSIDPQIVFWLGSGFALILML 177 (396)
T ss_pred HHHHHHHhhhhccCchHHHHHHHHHHHHHHH
Confidence 777765 6899999887766655443
No 47
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.65 E-value=3.2e-13 Score=142.10 Aligned_cols=161 Identities=12% Similarity=0.120 Sum_probs=122.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
|..+.+.....+..++.....+.+ +++.+++ |.+..+++++.+.+.....++.++.|+++||+ ||||++.++..+..
T Consensus 8 ~~l~~~~~~~~~~~~~~~~~~p~~-~~i~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-grr~~~~~~~~~~~ 84 (394)
T PRK11652 8 NLLFMLVLLVAVGQMAQTIYVPAI-ADMARDL-NVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-GRRPVILVGMSIFI 84 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccH-HHHHHHh-CCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHHH
Confidence 444545555555555555444444 4555679 99999999999999999999999999999995 99999999999999
Q ss_pred HhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHH
Q 009308 116 LGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSV 195 (538)
Q Consensus 116 ~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~ 195 (538)
++.++...+. +.+.+++.|++.|++.+...+....+..|.+++ + ++....+++..+..+|.
T Consensus 85 ~~~~~~~~~~--------~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------~---~~~~~~~~~~~~~~~~~ 145 (394)
T PRK11652 85 LGTLVALFAH--------SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEG--------T---QLRHANSLLNMGILVSP 145 (394)
T ss_pred HHHHHHHHHc--------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCH--------H---HHHHHHHHHHHHHHHHH
Confidence 9888776653 467889999999999998888888888888764 1 23345556667777777
Q ss_pred HHHHHh-------hhhhHHHHHHHHHHHHH
Q 009308 196 IASVQL-------SSWRVISTFTVSATGIT 218 (538)
Q Consensus 196 ~i~~~~-------~g~~~~F~i~~~~~~l~ 218 (538)
.+++.+ .||+..|.+.++..++.
T Consensus 146 ~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~ 175 (394)
T PRK11652 146 LLAPLIGGLLTTLFGWRACYLFLLLLGAGV 175 (394)
T ss_pred HHHHHHHHHHHhccChHHHHHHHHHHHHHH
Confidence 776654 58999998876555433
No 48
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.65 E-value=2.1e-13 Score=145.55 Aligned_cols=161 Identities=9% Similarity=0.054 Sum_probs=113.0
Q ss_pred HHHHHHHHHHHhHHHHHHHhcccCCC---CChHHHHHHHHHHHHHHH---HHHHHhhhhhhccCCchHHHHHHHHHHHHh
Q 009308 44 LIFSHKLVDIAVVAVLITYLTDYPRN---YNVVEAARLVNLQEGISA---STVIFLTCIPDAFSGRLNVIFYSTISCILG 117 (538)
Q Consensus 44 ~~~~er~~~~g~~~~l~~yl~~~l~g---~s~~~a~~i~~~~~~~~~---~~~l~gG~laD~~lGr~~~i~~~~~~~~~G 117 (538)
..++|.+.+. ..+.+.+++.+++ + .+..+.+.+.+.+..... ++.+++|+++||+ ||||++.++.+++.++
T Consensus 30 ~~~~~~~d~~-~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-Grr~~l~~~~~~~~~~ 106 (432)
T PRK10406 30 GNLVEWFDFY-VYSFCSLYFAHIF-FPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-GRKKSMLISVCMMCFG 106 (432)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHh-CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHH
Confidence 3455555544 3456666777765 4 344544455555544444 7788999999995 9999999999999999
Q ss_pred HHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHH
Q 009308 118 LVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIA 197 (538)
Q Consensus 118 ~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i 197 (538)
.++..++.............+++.|+++|+|.|+..|...++++|.+|+ ++ |..+.+..+.+.+.|.++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~--------~~---rg~~~~~~~~~~~~G~~~ 175 (432)
T PRK10406 107 SLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVE--------GR---KGFYASFQYVTLIGGQLL 175 (432)
T ss_pred HHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCC--------Cc---ccHHHHHHHHHHHHHHHH
Confidence 9887765421000001234688999999999999999999999999876 23 344556667778888877
Q ss_pred HHHh---------------hhhhHHHHHHHHHHHHH
Q 009308 198 SVQL---------------SSWRVISTFTVSATGIT 218 (538)
Q Consensus 198 ~~~~---------------~g~~~~F~i~~~~~~l~ 218 (538)
+..+ .|||..|.+.++..++.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 176 ALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA 211 (432)
T ss_pred HHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence 7642 48999999876655543
No 49
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.65 E-value=3.4e-13 Score=142.55 Aligned_cols=151 Identities=10% Similarity=0.034 Sum_probs=118.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHH
Q 009308 33 CFCKAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTI 112 (538)
Q Consensus 33 ~~~~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~ 112 (538)
+.||.+.......++-.++.+.....+.++++ ++ |.+.++++.+.+.+.....++.++.|+++||+ ||||++..+..
T Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~-g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~-g~k~~l~~~~~ 86 (402)
T TIGR00897 10 GIPLNLLWGYIGVVVFMTGDGLEQGWLSPFLK-AL-GLSPQQSASAFTLYGIAAAISAWISGVVAEII-GPLKTMMIGLL 86 (402)
T ss_pred CCCchhhHHHHHHHHHHHhhhhHHHhHHHHHH-Hh-CCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHH
Confidence 44688877888888888887777778888885 59 99999999999999999999999999999995 99999999999
Q ss_pred HHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHH
Q 009308 113 SCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFF 192 (538)
Q Consensus 113 ~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~n 192 (538)
+..++.+++....... .+...+++.|++.|+|.+...+...+.+.+.+++ + ++.+..+++..+.+
T Consensus 87 ~~~~~~~~~~~~~~~~----~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~--------~---~~g~~~g~~~~~~~ 151 (402)
T TIGR00897 87 LWCVGHAAFIVFGLGH----ANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQ--------D---NLSSAVGWFWAVYS 151 (402)
T ss_pred HHHHHHHHHHHHhccC----ccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCH--------H---HHHHHHHHHHHHHH
Confidence 9998876543221100 1366778899999999998888888888888765 2 34556677777778
Q ss_pred HHH-HHHHHh
Q 009308 193 FSV-IASVQL 201 (538)
Q Consensus 193 iG~-~i~~~~ 201 (538)
+|. .+++.+
T Consensus 152 ~g~~~~g~~~ 161 (402)
T TIGR00897 152 IGIGVFGSYY 161 (402)
T ss_pred HHHHHHHHHH
Confidence 885 456543
No 50
>TIGR00898 2A0119 cation transport protein.
Probab=99.64 E-value=7.5e-14 Score=151.84 Aligned_cols=140 Identities=14% Similarity=0.099 Sum_probs=114.7
Q ss_pred HHhcccCCCCC---hHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHHH
Q 009308 61 TYLTDYPRNYN---VVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKRL 137 (538)
Q Consensus 61 ~yl~~~l~g~s---~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~ 137 (538)
.-+.+++ +.+ ..+++++.+.+..+..++.++.|+++||+ |||+++.++.++..++.++..++. +.+.
T Consensus 113 ~~i~~e~-~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~~--------~~~~ 182 (505)
T TIGR00898 113 STIVTEW-DLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-GRKKVLLLSTLVTAVSGVLTAFSP--------NYTV 182 (505)
T ss_pred ccEEEEe-cceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHcc--------cHHH
Confidence 3455678 888 89999999999999999999999999995 999999999999999888777654 5778
Q ss_pred HHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh----hhhhHHHHHHHH
Q 009308 138 ILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL----SSWRVISTFTVS 213 (538)
Q Consensus 138 ~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~----~g~~~~F~i~~~ 213 (538)
++++|++.|++.|+..+...+++.|.+|+ ++| .....++..+.++|.++++.+ .+||+.|.+.++
T Consensus 183 ~~~~r~l~G~~~~~~~~~~~~~~~e~~~~--------~~r---~~~~~~~~~~~~~g~~~~~~~~~~~~~wr~~~~~~~i 251 (505)
T TIGR00898 183 FLVFRLLVGMGIGGIWVQAVVLNTEFLPK--------KQR---AIVGTLIQVFFSLGLVLLPLVAYFIPDWRWLQLAVSL 251 (505)
T ss_pred HHHHHHHHHhhccchHHHHHHHhheecCh--------hhh---HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 99999999999999999999999999976 233 344455566777888777765 579999988766
Q ss_pred HHHHHHHH
Q 009308 214 ATGITLFI 221 (538)
Q Consensus 214 ~~~l~~~~ 221 (538)
..++..+.
T Consensus 252 ~~~~~~~~ 259 (505)
T TIGR00898 252 PTFLFFLL 259 (505)
T ss_pred HHHHHHHH
Confidence 65544443
No 51
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.64 E-value=1e-13 Score=149.49 Aligned_cols=142 Identities=9% Similarity=0.014 Sum_probs=111.2
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhcc--c--cccchhHHHHHHH
Q 009308 66 YPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFE--E--AASPLLKRLILIG 141 (538)
Q Consensus 66 ~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~--~--~~~~~~~~~~~~~ 141 (538)
++ +.+..+++++.+.+..+..++++++|+++||+ ||||++.++.+++.++.++...+... . .........++++
T Consensus 49 ~~-~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~-Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 126 (479)
T PRK10077 49 SE-SAANSLLGFCVASALIGCIIGGALGGYCSNRF-GRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIY 126 (479)
T ss_pred cc-cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHH
Confidence 46 78899999999999999999999999999995 99999999999999888766653210 0 0011135678899
Q ss_pred HHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh---------------hhhhH
Q 009308 142 VVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL---------------SSWRV 206 (538)
Q Consensus 142 l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~---------------~g~~~ 206 (538)
|++.|+|.|+..|...++++|.+|+ ++ |....+.+..+..+|.++++.+ .|||+
T Consensus 127 R~l~G~~~g~~~~~~~~~i~e~~~~--------~~---rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~ 195 (479)
T PRK10077 127 RIIGGIGVGLASMLSPMYIAEIAPA--------HI---RGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRY 195 (479)
T ss_pred HHHHhhhHhHHhhHHHHHHHhhCCh--------hh---hhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHH
Confidence 9999999999999999999999986 33 3445666667778888876543 38999
Q ss_pred HHHHHHHHHHHHHH
Q 009308 207 ISTFTVSATGITLF 220 (538)
Q Consensus 207 ~F~i~~~~~~l~~~ 220 (538)
.|.+.++..++..+
T Consensus 196 ~f~~~~~~~~~~~~ 209 (479)
T PRK10077 196 MFASEAIPALLFLM 209 (479)
T ss_pred HHHHHHHHHHHHHH
Confidence 99987666655444
No 52
>PRK11043 putative transporter; Provisional
Probab=99.64 E-value=2.8e-13 Score=142.86 Aligned_cols=138 Identities=14% Similarity=0.098 Sum_probs=110.3
Q ss_pred hcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHHHHHHHH
Q 009308 63 LTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKRLILIGV 142 (538)
Q Consensus 63 l~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l 142 (538)
+++++ |.+.++++++.+.+.....++.++.|+++||+ |||+++..+..+..++.++...+. +.+.++++|
T Consensus 32 i~~~~-~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~--------~~~~l~~~~ 101 (401)
T PRK11043 32 IQADL-QTSASAVSASLSLFLAGFALGQLLWGPLSDRY-GRKPVLLAGLSLFALGSLGMLWVE--------SAAQLLVLR 101 (401)
T ss_pred HHHHH-CCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-CCcHHHHHHHHHHHHHHHHHHHhc--------CHHHHHHHH
Confidence 56779 99999999999999999999999999999995 999999999999998887776654 467888999
Q ss_pred HHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-------hhhhHHHHHHHHHH
Q 009308 143 VLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL-------SSWRVISTFTVSAT 215 (538)
Q Consensus 143 ~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~-------~g~~~~F~i~~~~~ 215 (538)
++.|+|.+...+...+++.|.+++ + ++.+.++......++|..+++.+ .||+..|.+..+..
T Consensus 102 ~l~G~~~~~~~~~~~~~~~~~~~~--------~---~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~ 170 (401)
T PRK11043 102 FVQAVGVCSAAVIWQALVIDRYPA--------Q---KANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAIT 170 (401)
T ss_pred HHHHhhhHHHHHHHHHHHHHhcCc--------H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHH
Confidence 999999998888888999998875 1 22334455555566666666554 69999998876666
Q ss_pred HHHHHH
Q 009308 216 GITLFI 221 (538)
Q Consensus 216 ~l~~~~ 221 (538)
++..+.
T Consensus 171 ~~~~~~ 176 (401)
T PRK11043 171 LLLILP 176 (401)
T ss_pred HHHHHH
Confidence 555443
No 53
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.64 E-value=2.9e-13 Score=146.08 Aligned_cols=144 Identities=7% Similarity=-0.106 Sum_probs=111.3
Q ss_pred HHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHHHH
Q 009308 59 LITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKRLI 138 (538)
Q Consensus 59 l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~~ 138 (538)
..+.+.+++ |.+.++.+++.+.+.....++.+++|+++||+ ||||++.++.++..++.+++...... ...+.+.+
T Consensus 51 ~~~~i~~~~-~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~l 125 (467)
T PRK09556 51 AQNDMISTY-GLSTTELGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFLLILSAICMLGFGASLGS---GSVSLGLM 125 (467)
T ss_pred hhHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHHHHHHHHHHHHHHHHHhc---ccchHHHH
Confidence 345667789 99999999999999999999999999999995 99999998888877776655542100 00257789
Q ss_pred HHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-------h---hhhHHH
Q 009308 139 LIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL-------S---SWRVIS 208 (538)
Q Consensus 139 ~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~-------~---g~~~~F 208 (538)
++.|++.|++.|...|...++++|.+|+ +| +....+++..+.++|..+++.+ . +|+..|
T Consensus 126 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~--------~~---rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f 194 (467)
T PRK09556 126 IALWALSGFFQSTGGPCSYSTITRWTPR--------RK---RGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMF 194 (467)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHcCc--------cc---eeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHH
Confidence 9999999999999999999999999986 23 4455566666778888887654 1 477778
Q ss_pred HHHHHHHHHH
Q 009308 209 TFTVSATGIT 218 (538)
Q Consensus 209 ~i~~~~~~l~ 218 (538)
.+.++..++.
T Consensus 195 ~~~g~~~~~~ 204 (467)
T PRK09556 195 IFPSIIALII 204 (467)
T ss_pred HHHHHHHHHH
Confidence 7765555433
No 54
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.63 E-value=7.1e-13 Score=138.21 Aligned_cols=146 Identities=14% Similarity=0.082 Sum_probs=119.9
Q ss_pred HhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccch
Q 009308 54 AVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPL 133 (538)
Q Consensus 54 g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~ 133 (538)
.+.+.++.+.+ ++ |.+.++++.+.+.+.....++.+++|+++||+ |||+++..+.++..++.+++....
T Consensus 9 ~~~p~~~~~~~-~~-~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~~~-------- 77 (377)
T PRK11102 9 MYLPALPVIAA-DF-GVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVACALAQ-------- 77 (377)
T ss_pred HHhccHHHHHH-Hh-CCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHHHHHc--------
Confidence 34455665655 59 99999999999999999999999999999995 999999999999999988877654
Q ss_pred hHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-------hhhhH
Q 009308 134 LKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL-------SSWRV 206 (538)
Q Consensus 134 ~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~-------~g~~~ 206 (538)
+.+.+++.|++.|++.+...+...+++.|.+++ + ++...+++.+...++|..+++.+ .||++
T Consensus 78 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~--------~---~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 146 (377)
T PRK11102 78 TIDQLIYMRFLHGLAAAAASVVINALMRDMFPK--------E---EFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHA 146 (377)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH--------H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHH
Confidence 467888999999999999999999999999875 2 34556677788888888888765 58999
Q ss_pred HHHHHHHHHHHHHHH
Q 009308 207 ISTFTVSATGITLFI 221 (538)
Q Consensus 207 ~F~i~~~~~~l~~~~ 221 (538)
.|.+.++..++..+.
T Consensus 147 ~~~~~~~~~~~~~~~ 161 (377)
T PRK11102 147 IFWVLALAAILAAAL 161 (377)
T ss_pred HHHHHHHHHHHHHHH
Confidence 998776666554443
No 55
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.63 E-value=9.7e-13 Score=143.08 Aligned_cols=171 Identities=17% Similarity=0.081 Sum_probs=129.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
|.+..++..++..++|...-.--+.-+++ ++ .-|....+.+......-..+..+++|.++||+ .|||.++.+.++..
T Consensus 10 ~~Fr~lw~a~~iS~lG~~~~~va~~wlv~-~l-t~S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~~ 86 (524)
T PF05977_consen 10 RNFRRLWIAQLISNLGDWMQTVALAWLVT-QL-TGSPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLRA 86 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-hCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHHH
Confidence 45555667777888887644444555555 47 77889999999999999999999999999995 99999999999988
Q ss_pred HhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHH
Q 009308 116 LGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSV 195 (538)
Q Consensus 116 ~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~ 195 (538)
+..+++.+..... ..+.+.+++.-++.|++.+...|...+++.|+.|+ +++..+.++.....|+.-
T Consensus 87 ~~~~~L~~l~~~~---~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~-----------~~L~~A~al~s~~~niar 152 (524)
T PF05977_consen 87 LVALLLAVLAFFG---LLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPK-----------EDLPAANALNSISFNIAR 152 (524)
T ss_pred HHHHHHHHHHHhC---cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-----------hhHHHHHHHHHHHHHHHH
Confidence 7666655443211 12567888888999999999999999999999876 234555666677777777
Q ss_pred HHHHHh-------hhhhHHHHHHHHHHHHHHHHHH
Q 009308 196 IASVQL-------SSWRVISTFTVSATGITLFIFR 223 (538)
Q Consensus 196 ~i~~~~-------~g~~~~F~i~~~~~~l~~~~~~ 223 (538)
++||.+ .|-.+.|.+.+++.++.+..+.
T Consensus 153 ~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~ 187 (524)
T PF05977_consen 153 IIGPALGGILVAFFGAAAAFLINALSFLISILALL 187 (524)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 776654 5777888888887776655444
No 56
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.62 E-value=1.1e-13 Score=143.29 Aligned_cols=143 Identities=10% Similarity=0.009 Sum_probs=119.5
Q ss_pred HHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHHH
Q 009308 58 VLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKRL 137 (538)
Q Consensus 58 ~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~ 137 (538)
...+++.+++ |.+..+++++.+.+.....++.+++|+++||+ |||+++.++.++..++.+++..+. +.+.
T Consensus 16 ~~~~~~~~~~-g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~--------~~~~ 85 (379)
T TIGR00881 16 LAMPYLVEEI-GLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFGFST--------SLWV 85 (379)
T ss_pred hhhHHHHHHh-CCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHHHhh--------hHHH
Confidence 4456777889 99999999999999999999999999999995 999999999999999988887764 4778
Q ss_pred HHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHH-h-------hhhhHHHH
Q 009308 138 ILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQ-L-------SSWRVIST 209 (538)
Q Consensus 138 ~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~-~-------~g~~~~F~ 209 (538)
++++|++.|++.|...+...+++.|.+|+ + ++....+++..+.++|..+++. + .+|++.|.
T Consensus 86 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------~---~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 154 (379)
T TIGR00881 86 MAALWALNGIFQGMGWPPCGRTVTKWFSR--------S---ERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFI 154 (379)
T ss_pred HHHHHHHHHhhccccCCchHHHHHHhcCH--------h---hheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHH
Confidence 89999999999999999999999999876 2 3445666667788888888873 2 68999998
Q ss_pred HHHHHHHHHHHH
Q 009308 210 FTVSATGITLFI 221 (538)
Q Consensus 210 i~~~~~~l~~~~ 221 (538)
+.++..++..++
T Consensus 155 ~~~~~~~~~~~~ 166 (379)
T TIGR00881 155 VPGIIAIIVSLI 166 (379)
T ss_pred HHHHHHHHHHHH
Confidence 877665544433
No 57
>PRK03699 putative transporter; Provisional
Probab=99.62 E-value=9.2e-13 Score=138.85 Aligned_cols=163 Identities=10% Similarity=0.029 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
|..+......+++....+.....++ .+.+++ |.|.++.+.+.+.+.....++.+++|+++||+ ||||++..+.++..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~g~~~~-~i~~~~-~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~~~~ 83 (394)
T PRK03699 7 KLTWISFLSYALTGALVIVTGMVMG-PIAEYF-NLPVSSMSNTFTFLNAGILISIFLNAWLMEII-PLKRQLIFGFALMI 83 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhH-HHHHHh-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHH
Confidence 3344455555555555554444444 455679 99999999999999999999999999999995 99999999999999
Q ss_pred HhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHH
Q 009308 116 LGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSV 195 (538)
Q Consensus 116 ~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~ 195 (538)
++.+++.++. +.+.+++.|++.|++.|...+...+++.|.+|+ ++| ....+..+...++|.
T Consensus 84 i~~~l~~~~~--------~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~--------~~r---~~~~~~~~~~~~~g~ 144 (394)
T PRK03699 84 LAVAGLMFSH--------SLALFSIAMFVLGVVSGITMSIGTFLITHVYEG--------KQR---GSRLLFTDSFFSMAG 144 (394)
T ss_pred HHHHHHHHcc--------hHHHHHHHHHHHHHhhHhhccchhHHhhhhccc--------chH---HHHHHHHHHHHHHHH
Confidence 9888877654 467889999999999999999999999999865 222 333344445556666
Q ss_pred HHHHHh--------hhhhHHHHHHHHHHHHHHH
Q 009308 196 IASVQL--------SSWRVISTFTVSATGITLF 220 (538)
Q Consensus 196 ~i~~~~--------~g~~~~F~i~~~~~~l~~~ 220 (538)
.+++.+ .|||+.|.+.++..++..+
T Consensus 145 ~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~ 177 (394)
T PRK03699 145 MIFPIIAAYLLARSIEWYWVYACIGLVYVAIFI 177 (394)
T ss_pred HHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH
Confidence 665543 5899999877665554443
No 58
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.62 E-value=1.4e-12 Score=137.11 Aligned_cols=155 Identities=15% Similarity=0.069 Sum_probs=120.5
Q ss_pred HHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHh
Q 009308 44 LIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFI 123 (538)
Q Consensus 44 ~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~ 123 (538)
..+..-.+.......+ +.+.+++ |.+..+.+++.+.+.....++.++.|+++||+ |||+.+..+.++..++.+++..
T Consensus 11 ~~~~~~~~~~~~~~~l-p~~~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~i~~~~~~~ 87 (392)
T PRK10473 11 LVLLYPAGIDMYLVGL-PRIAADL-NASEAQLHIAFSVYLAGMAAAMLFAGKIADRS-GRKPVAIPGAALFIIASLLCSL 87 (392)
T ss_pred HHHHHHHHHHHHhhhH-HHHHHHh-CCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-CChHHHHHHHHHHHHHHHHHHH
Confidence 3334444544344444 4455669 99999999999999999999999999999995 9999999999999999888776
Q ss_pred hhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh--
Q 009308 124 TAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL-- 201 (538)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~-- 201 (538)
+. +...++++|++.|++.+...+...+++.|.+++ + ++.+..++.+...++|..+++.+
T Consensus 88 ~~--------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~--------~---~r~~~~~~~~~~~~i~~~~~~~i~~ 148 (392)
T PRK10473 88 AE--------TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDD--------R---RRAKVLSLLNGITCIIPVLAPVLGH 148 (392)
T ss_pred hC--------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCH--------H---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 54 466788899999999999999999999999875 2 34455667777778887777665
Q ss_pred -----hhhhHHHHHHHHHHHHHHH
Q 009308 202 -----SSWRVISTFTVSATGITLF 220 (538)
Q Consensus 202 -----~g~~~~F~i~~~~~~l~~~ 220 (538)
.||+..|.+.++..++..+
T Consensus 149 ~l~~~~g~~~~~~~~~~~~~i~~~ 172 (392)
T PRK10473 149 LIMLKFPWQSLFYTMAAMGILVLL 172 (392)
T ss_pred HHHhCcChHHHHHHHHHHHHHHHH
Confidence 6899999887665554444
No 59
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.62 E-value=6.6e-13 Score=139.95 Aligned_cols=165 Identities=11% Similarity=0.040 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHH-HHHHHHHHhhhhhhccCCchHHHH-HHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEG-ISASTVIFLTCIPDAFSGRLNVIF-YSTIS 113 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~-~~~~~~l~gG~laD~~lGr~~~i~-~~~~~ 113 (538)
...+.++...++.+++.....+.+..|+++++ |.+.+++|.+.+.... ...+.++++|+ +||+ ||||.+. .+.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~-~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~-g~r~~~~~~~~~~ 91 (393)
T PRK15011 15 LTSTAFLIVAFLTGIAGALQTPTLSIFLTDEV-HARPAMVGFFFTGSAVIGILVSQFLAGR-SDKR-GDRKSLIVFCCLL 91 (393)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-cchhHHHHHHHHH
Confidence 44566667799999999888999999999999 9999999999776544 55566666777 9995 9988754 45555
Q ss_pred HHHhHHHHHhhhccccccchhHHHHHHH-HHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHH
Q 009308 114 CILGLVLLFITAFEEAASPLLKRLILIG-VVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFF 192 (538)
Q Consensus 114 ~~~G~~ll~~~~~~~~~~~~~~~~~~~~-l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~n 192 (538)
..++.+++.++. +.+.+++. +++.+++ +...|...++..|..++ ++| ....+.++...+.+
T Consensus 92 ~~~~~~~~~~~~--------~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--------~~~-~~~~~~~~~~~~~~ 153 (393)
T PRK15011 92 GVLACTLFAWNR--------NYFVLLFVGVFLSSFG-STANPQMFALAREHADK--------TGR-EAVMFSSFLRAQVS 153 (393)
T ss_pred HHHHHHHHHHhh--------HHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHhhh--------ccc-hHHHHHHHHHHHHH
Confidence 556666555543 34444444 4444444 45677777777776543 122 11112245666788
Q ss_pred HHHHHHHHh-------hhhhHHHHHHHHHHHHHHHH
Q 009308 193 FSVIASVQL-------SSWRVISTFTVSATGITLFI 221 (538)
Q Consensus 193 iG~~i~~~~-------~g~~~~F~i~~~~~~l~~~~ 221 (538)
+|.++++.+ .||+..|.+.++..++..+.
T Consensus 154 lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~ 189 (393)
T PRK15011 154 LAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVM 189 (393)
T ss_pred HHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHH
Confidence 888888765 59999998877665544443
No 60
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.62 E-value=1.9e-12 Score=133.86 Aligned_cols=170 Identities=13% Similarity=0.067 Sum_probs=134.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
..++.+....|+--..-+...+.|+.-- +++ |.|..++|+.++.|.....++.++-..+.|| +.||+.++....+++
T Consensus 13 ~~l~aLa~~~F~igttEfv~~gLLp~iA-~dl-~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r-~~Rr~lLl~~l~lFi 89 (394)
T COG2814 13 LALLALALAAFAIGTTEFVPVGLLPPIA-ADL-GVSEGAAGQLITAYALGVALGAPLLALLTGR-LERRRLLLGLLALFI 89 (394)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhchHHHH-HHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcc-cchHHHHHHHHHHHH
Confidence 4555555666666666665666666544 459 9999999999999999999999999999999 599999999999999
Q ss_pred HhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHH
Q 009308 116 LGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSV 195 (538)
Q Consensus 116 ~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~ 195 (538)
+|.++.+++. ++..+.++|++.|+.-|.+.+...+..+|..|+ +++.++......+..++.
T Consensus 90 ~~n~l~alAp--------~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp-----------~~~~~Aiaiv~~G~tlA~ 150 (394)
T COG2814 90 VSNLLSALAP--------SFAVLLLARALAGLAHGVFWSIAAALAARLVPP-----------GKRGRALALVFTGLTLAT 150 (394)
T ss_pred HHHHHHHHhc--------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc-----------cchhhHHHHHHHHHHHHH
Confidence 9999988885 688999999999999999999999999999987 244555666555555555
Q ss_pred HHHH----Hh---hhhhHHHHHHHHHHHHHHHHHHhccc
Q 009308 196 IASV----QL---SSWRVISTFTVSATGITLFIFRLGIR 227 (538)
Q Consensus 196 ~i~~----~~---~g~~~~F~i~~~~~~l~~~~~~~~~~ 227 (538)
.+|. .+ .|||..|.+-++..+++++..+..-|
T Consensus 151 v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 151 VLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 5553 33 89999998876666666555444333
No 61
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.62 E-value=1.1e-12 Score=137.75 Aligned_cols=150 Identities=8% Similarity=-0.112 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHH----HHHHHHHH
Q 009308 40 ILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVI----FYSTISCI 115 (538)
Q Consensus 40 ~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i----~~~~~~~~ 115 (538)
.+....++..+++-...+.++.|++ ++ |.|.++.+.+.+.+.....+++++.|.++||+ ||++.. ..+..+..
T Consensus 8 ~l~~~~~~~~~~~~~~~p~l~~~l~-~~-g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~l~~ 84 (382)
T TIGR00902 8 WLALGFFGYFCAYGIFLPFFPAWLK-GI-GLGEEMIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASAIFA 84 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-Hc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHH
Confidence 3445566666666666677888886 59 99999999999999999999999999999995 985433 22222222
Q ss_pred HhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHH
Q 009308 116 LGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSV 195 (538)
Q Consensus 116 ~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~ 195 (538)
+ .+...++ +.+.+++.|.+.+.+.+...|...++..|. ++ ++...++......++|.
T Consensus 85 ~--~~~~~~~--------~~~~l~~~~~l~~~~~~~~~p~~~al~~~~-~~------------~~~~~~g~~~~~~slG~ 141 (382)
T TIGR00902 85 A--AFSAGAH--------NAWLLFIAIGLFALFFSAGMPIGDALANTW-QK------------QFGLDYGKVRLIGSAAF 141 (382)
T ss_pred H--HHHHhhh--------hHHHHHHHHHHHHHHHccchhHHHHHHHHH-HH------------HcCCCccHHHHHHHHHH
Confidence 1 1111222 467888899999999888888887776443 21 23456777788888999
Q ss_pred HHHHHh-------hhhhHHHHHHHHHH
Q 009308 196 IASVQL-------SSWRVISTFTVSAT 215 (538)
Q Consensus 196 ~i~~~~-------~g~~~~F~i~~~~~ 215 (538)
.+++.+ .||+..|.+..+..
T Consensus 142 ~~g~~l~g~l~~~~g~~~~f~~~~~~~ 168 (382)
T TIGR00902 142 IIGSALFGGLIGMFDEQNILAILTAGL 168 (382)
T ss_pred HHHHHHHHHHHHHcChhHHHHHHHHHH
Confidence 988875 69999998765543
No 62
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.61 E-value=2e-12 Score=137.66 Aligned_cols=108 Identities=9% Similarity=0.018 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHh
Q 009308 44 LIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFI 123 (538)
Q Consensus 44 ~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~ 123 (538)
..++-.+++-.+.+++..|+++++ |++.++.|++.+.+..+..+++++.|.++||+.|||+++.++.++..++..+..+
T Consensus 10 ~~~~~~~~~~~~~~~l~~~l~~~~-g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~ 88 (418)
T TIGR00889 10 MSFLQWFIWGSWLVTLGSYMSKTL-HFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQ 88 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 444555566667799999999999 9999999999999999999999999999999634577888888877776666554
Q ss_pred hhccccccchhHHHHHHHHHHHHHhchhhcccchhhh
Q 009308 124 TAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFL 160 (538)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ 160 (538)
.. +.+.+++.|++.+++.+...+...+..
T Consensus 89 ~~--------~~~~~~~~~~l~~~~~~~~~~~~~~l~ 117 (418)
T TIGR00889 89 VT--------TPAGMFPVLLANSLAYMPTIALTNSIS 117 (418)
T ss_pred hc--------CHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 43 355667788888887776666655554
No 63
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.61 E-value=9.2e-13 Score=139.89 Aligned_cols=142 Identities=11% Similarity=-0.004 Sum_probs=118.4
Q ss_pred HHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHHH
Q 009308 58 VLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKRL 137 (538)
Q Consensus 58 ~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~ 137 (538)
...+.+++++ |.+.++.+++.+.+..+..++.++.|+++||+ |||+++..+.+++.++.++..++. +.+.
T Consensus 29 ~~~~~l~~~~-~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~~~~~~~~~~~~~--------~~~~ 98 (412)
T TIGR02332 29 FAGLTMGKDL-GLSATMFGLAATLFYAAYVICGIPSNIMLAII-GARRWIAGIMVLWGIASTATMFAT--------GPES 98 (412)
T ss_pred HHHHhhHhhc-CCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHhc--------CHHH
Confidence 4455788899 99999999999999999999999999999995 999999999999999998887764 4678
Q ss_pred HHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-------------hhh
Q 009308 138 ILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL-------------SSW 204 (538)
Q Consensus 138 ~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~-------------~g~ 204 (538)
++++|++.|++.|...|....+++|.+|+ ++ |....+++..+.++|..+++.+ .||
T Consensus 99 l~~~r~l~G~~~~~~~~~~~~~~~~~~~~--------~~---rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gw 167 (412)
T TIGR02332 99 LYLLRILVGIAEAGFLPGILLYLTFWFPA--------YF---RARANALFMIAMPVTMALGLILSGYILALDGLMALKGW 167 (412)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHcCH--------HH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccch
Confidence 99999999999999999999999999876 23 3455666777777888777654 289
Q ss_pred hHHHHHHHHHHHHHHH
Q 009308 205 RVISTFTVSATGITLF 220 (538)
Q Consensus 205 ~~~F~i~~~~~~l~~~ 220 (538)
|+.|.+.++..++..+
T Consensus 168 r~~f~~~~~~~l~~~~ 183 (412)
T TIGR02332 168 QWLFLLEGFPSVILGV 183 (412)
T ss_pred hHHHHHHHHHHHHHHH
Confidence 9999987666554333
No 64
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.61 E-value=9.3e-13 Score=141.52 Aligned_cols=143 Identities=6% Similarity=0.013 Sum_probs=111.5
Q ss_pred HHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHHH
Q 009308 58 VLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKRL 137 (538)
Q Consensus 58 ~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~ 137 (538)
...+|+.+ . |.+..+.+.+.+.+.....++.+++|+++||+ |||+++.++.++.+++.+++.+..... .+...
T Consensus 50 ~~~p~l~~-~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~i~~~~~~~~~~~~----~~~~~ 122 (452)
T PRK11273 50 LAMPYLVE-Q-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAAVMLFMGFVPWAT----SSIAV 122 (452)
T ss_pred HhhHHHHH-c-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHHHHHHHHHhhhccc----ccHHH
Confidence 34456664 5 88999999999999999999999999999995 999999999999998887776542100 13567
Q ss_pred HHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHH-HHHHHh-------hhhhHHHH
Q 009308 138 ILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSV-IASVQL-------SSWRVIST 209 (538)
Q Consensus 138 ~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~-~i~~~~-------~g~~~~F~ 209 (538)
+++.|++.|++.|...|.......|++++ + ++....+++..+.++|. +.++.+ .||++.|+
T Consensus 123 ~~~~~~l~gi~~g~~~~~~~~~~~~~~~~--------~---~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~ 191 (452)
T PRK11273 123 MFVLLFLCGWFQGMGWPPCGRTMVHWWSQ--------K---ERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALY 191 (452)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHhCCh--------H---HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHH
Confidence 78889999999999988888889998875 2 34456677778888876 344432 48999998
Q ss_pred HHHHHHHHH
Q 009308 210 FTVSATGIT 218 (538)
Q Consensus 210 i~~~~~~l~ 218 (538)
+.++..++.
T Consensus 192 i~~~~~~~~ 200 (452)
T PRK11273 192 MPAFAAILV 200 (452)
T ss_pred HHHHHHHHH
Confidence 876655543
No 65
>PRK09952 shikimate transporter; Provisional
Probab=99.60 E-value=1.9e-12 Score=138.64 Aligned_cols=120 Identities=11% Similarity=0.054 Sum_probs=87.9
Q ss_pred HHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhcccc
Q 009308 86 SASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLR 165 (538)
Q Consensus 86 ~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~ 165 (538)
..++.++.|+++||+ |||+++.++.+++.++.++..++.............+++.|+++|+|.|+..|...+++.|.+|
T Consensus 77 ~~~g~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p 155 (438)
T PRK09952 77 RPLGGVVFGHFGDRL-GRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAP 155 (438)
T ss_pred HhhHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCC
Confidence 346667789999995 9999999999999999988877642110000001257889999999999999999999999987
Q ss_pred ccCccccCcccccceeeeehhhHHHHHHHHHHHHHh---------------hhhhHHHHHHHHHHHH
Q 009308 166 AHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL---------------SSWRVISTFTVSATGI 217 (538)
Q Consensus 166 ~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~---------------~g~~~~F~i~~~~~~l 217 (538)
+ ++| ....+....+.++|.+++..+ .|||..|.+.++..++
T Consensus 156 ~--------~~r---g~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~ 211 (438)
T PRK09952 156 K--------NKK---AFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLI 211 (438)
T ss_pred C--------CCC---cHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHH
Confidence 6 233 344455666777787776432 4899999987665443
No 66
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.60 E-value=6.6e-14 Score=149.83 Aligned_cols=140 Identities=17% Similarity=0.075 Sum_probs=116.3
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHHHHHHHHHHH
Q 009308 66 YPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKRLILIGVVLL 145 (538)
Q Consensus 66 ~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~ 145 (538)
++ +++..+-+.+.+.+..+..++.+++|+++||+ |-|+++.++.++.++++++..+++.. +.+.+++.|+++
T Consensus 67 ~~-~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~P~aa~~------~~~~~~~~R~lq 138 (466)
T KOG2532|consen 67 EY-DWSSTEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLTPLAASI------GFYLLLVLRFLQ 138 (466)
T ss_pred ee-cCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHHh------cchhhHHHHHHh
Confidence 46 78999999999999999999999999999996 99999999999999999999887642 345778999999
Q ss_pred HHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh--------hhhhHHHHHHHHHHHH
Q 009308 146 AVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL--------SSWRVISTFTVSATGI 217 (538)
Q Consensus 146 g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~--------~g~~~~F~i~~~~~~l 217 (538)
|++.|...|+...+.+...|+ .|| ..+.+..+-+..+|.+++..+ .||+..|++.++..++
T Consensus 139 Gl~~g~~~pa~~~i~~~W~P~--------~Er---s~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i 207 (466)
T KOG2532|consen 139 GLGQGVLFPAIGSILAKWAPP--------NER---STFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLI 207 (466)
T ss_pred HHHHhHHHhhhhceeeeECCH--------HHH---HHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHH
Confidence 999999999999999999887 454 345555555666666666533 6999999998877776
Q ss_pred HHHHHHh
Q 009308 218 TLFIFRL 224 (538)
Q Consensus 218 ~~~~~~~ 224 (538)
..++|..
T Consensus 208 ~~~~w~~ 214 (466)
T KOG2532|consen 208 WFILWFL 214 (466)
T ss_pred HHHHHHH
Confidence 6666554
No 67
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.60 E-value=1.2e-12 Score=156.27 Aligned_cols=148 Identities=14% Similarity=-0.004 Sum_probs=116.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCC--hHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYN--VVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTIS 113 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s--~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~ 113 (538)
+.+..++...++..++..+....+..++.+.+ +.+ ....+++.+++.....++.+++|+++||+ |||+++.++.++
T Consensus 9 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~ 86 (1146)
T PRK08633 9 IGFLPLLLTQFLNAFNDLGHKILIQNTLIKAY-DGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLF 86 (1146)
T ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHc-CcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHH
Confidence 45555666777777777777777777776555 544 34578889999999999999999999995 999999999888
Q ss_pred HHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHH
Q 009308 114 CILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFF 193 (538)
Q Consensus 114 ~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~ni 193 (538)
.+++.++..++... .+.+.++++|++.|++.|...|...++++|.+++ +++..+++++..+.++
T Consensus 87 ~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-----------~~r~~~~~~~~~~~~i 150 (1146)
T PRK08633 87 EVGLTLLIVLAYYL-----GWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGK-----------ENLSRANGLLEAFTIV 150 (1146)
T ss_pred HHHHHHHHHHHHHH-----ccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCc-----------ccchhhhhHHHHHHHH
Confidence 77766655544221 1467899999999999999999999999999876 2456677888888888
Q ss_pred HHHHHHHh
Q 009308 194 SVIASVQL 201 (538)
Q Consensus 194 G~~i~~~~ 201 (538)
|.++|+.+
T Consensus 151 g~~lg~~l 158 (1146)
T PRK08633 151 AILAGTAL 158 (1146)
T ss_pred HHHHHHHH
Confidence 88888776
No 68
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.59 E-value=4.3e-13 Score=144.49 Aligned_cols=138 Identities=7% Similarity=-0.085 Sum_probs=113.8
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHHHHHHHHHHH
Q 009308 66 YPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKRLILIGVVLL 145 (538)
Q Consensus 66 ~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~ 145 (538)
++ +.+..+.|.+.+.+..+..++.+++|+++||+ |||+++.++.++..++.++...+.. .+...+++.|++.
T Consensus 70 ~~-~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~------~~~~~l~~~r~~~ 141 (465)
T TIGR00894 70 NF-KWSGALQGLILSSHFYGQIIIQIPVGYLAGKY-VFKWSIGIGMFLSSVISIVIPWAAG------GGIALVVFCRVIQ 141 (465)
T ss_pred CC-CCCHHHhhHHHHHHHHHHHHHHcchHHHHHHh-CcchhhHHHHHHHHHHHHHHHHHHH------cCchHHHHHHHHH
Confidence 57 89999999999999999999999999999995 9999999999998888777654321 1356789999999
Q ss_pred HHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-------h-hhhHHHHHHHHHHHH
Q 009308 146 AVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL-------S-SWRVISTFTVSATGI 217 (538)
Q Consensus 146 g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~-------~-g~~~~F~i~~~~~~l 217 (538)
|++.|...|....+++|.+|+ + ++..+.+++..+.++|.++++.+ . ||+..|.+.++..++
T Consensus 142 G~~~~~~~~~~~~~~~~~~~~--------~---~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~ 210 (465)
T TIGR00894 142 GLAQGSVSPATHKIIVKWAPP--------K---ERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCA 210 (465)
T ss_pred HHhcccchhhHHHHHHhcCCH--------H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHH
Confidence 999999999999999999876 2 34566677788889999888765 3 899999987776655
Q ss_pred HHHHH
Q 009308 218 TLFIF 222 (538)
Q Consensus 218 ~~~~~ 222 (538)
..+++
T Consensus 211 ~~~~~ 215 (465)
T TIGR00894 211 WSLLW 215 (465)
T ss_pred HHHHH
Confidence 44433
No 69
>PRK10133 L-fucose transporter; Provisional
Probab=99.59 E-value=1.3e-12 Score=139.85 Aligned_cols=113 Identities=14% Similarity=0.093 Sum_probs=92.5
Q ss_pred HHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhh
Q 009308 46 FSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITA 125 (538)
Q Consensus 46 ~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~ 125 (538)
+..-+... ....+.+.+++.+ |.+..+++.+.+.+..+..++.++.|.+.||+ ||||++..+..++.+|.++.....
T Consensus 36 ~~~~~~~~-~~~~~~p~i~~~~-~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-G~r~~l~~g~~~~~~~~~l~~~~~ 112 (438)
T PRK10133 36 FLWAVANN-LNDILLPQFQQAF-TLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITGLFLYALGAALFWPAA 112 (438)
T ss_pred HHHHHHHH-HHHHHHHHHHHHh-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334443 4444555668889 99999999999999999999999999999995 999999999999999998764222
Q ss_pred ccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccc
Q 009308 126 FEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRA 166 (538)
Q Consensus 126 ~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~ 166 (538)
.. .++..++++|++.|+|.|...+..+++++|..++
T Consensus 113 ~a-----~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~ 148 (438)
T PRK10133 113 EI-----MNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPE 148 (438)
T ss_pred hc-----CCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCh
Confidence 11 1577899999999999999999999999987543
No 70
>PRK15075 citrate-proton symporter; Provisional
Probab=99.59 E-value=1.2e-12 Score=139.93 Aligned_cols=156 Identities=15% Similarity=0.034 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHH-HHHHHH-HHH----HHHHHhhhhhhccCCchHHHHHHHHHH
Q 009308 41 LLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARL-VNLQEG-ISA----STVIFLTCIPDAFSGRLNVIFYSTISC 114 (538)
Q Consensus 41 l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i-~~~~~~-~~~----~~~l~gG~laD~~lGr~~~i~~~~~~~ 114 (538)
-...+..+|... ....+.+.+++ +.++.+.+.. .+.... ..+ ++.++.|+++||+ ||||.+..+.+++
T Consensus 23 ~~~~~~~d~~~~----~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~~~~~~ 96 (434)
T PRK15075 23 GNFLEMFDFFLF----GFYATAIAKTF-FPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV-GRRKGLIVTLSIM 96 (434)
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHh-CCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh-chHHHHHHHHHHH
Confidence 334444444443 35556777778 8777765443 333222 222 4678899999995 9999999999999
Q ss_pred HHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHH
Q 009308 115 ILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFS 194 (538)
Q Consensus 115 ~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG 194 (538)
.++.++..++.....-.......++++|++.|+|.|+..++..++++|.+|+ ++ |....+++..+.++|
T Consensus 97 ~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~--------~~---rg~~~~~~~~~~~~g 165 (434)
T PRK15075 97 ASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATP--------GR---KGFYTSWQSASQQVA 165 (434)
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCc--------cc---chHHHHHHHHHHHHH
Confidence 9999888876421100000012468899999999999999999999999986 23 334445444444444
Q ss_pred HHH----HHHh-----------hhhhHHHHHHHH
Q 009308 195 VIA----SVQL-----------SSWRVISTFTVS 213 (538)
Q Consensus 195 ~~i----~~~~-----------~g~~~~F~i~~~ 213 (538)
..+ +..+ .|||+.|.+..+
T Consensus 166 ~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 166 VVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred HHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 443 3322 589999987543
No 71
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.58 E-value=7.9e-13 Score=140.78 Aligned_cols=164 Identities=15% Similarity=0.099 Sum_probs=118.0
Q ss_pred HHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhcc---CCchH-HHHHHHHHHHHhHHH
Q 009308 45 IFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAF---SGRLN-VIFYSTISCILGLVL 120 (538)
Q Consensus 45 ~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~---lGr~~-~i~~~~~~~~~G~~l 120 (538)
++...+.+..+...+..|+++.+ |.+.+++|.+.+.......+..++.|+++||. +|||| .+.++..+..++.++
T Consensus 8 ~~~~~~~~~~~~~~l~~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~ 86 (437)
T TIGR00792 8 DFGNNFIFAIVSTYLLFFYTDVL-GLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVL 86 (437)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHH
Confidence 34455566667778899999999 99999999999999999999999999999983 58855 577788888887776
Q ss_pred HHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHH
Q 009308 121 LFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQ 200 (538)
Q Consensus 121 l~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~ 200 (538)
+...... ....+...+++.+++.+++.+...+...++.+|..++ ++||. +..++...+.++|.+++..
T Consensus 87 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~-------~~~R~---~~~~~~~~~~~~g~~l~~~ 154 (437)
T TIGR00792 87 LFTTPDF--SATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLD-------PRERE---SLSTFRRFGATLGGLLVAV 154 (437)
T ss_pred HHhCCCC--CcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCC-------HHHHH---HHHHHHHHHHHHHHHHHHH
Confidence 6543211 1112345667777888999998888888999888643 34543 4445555667777665533
Q ss_pred h--------------hhhhHHHHHHHHHHHHHHHH
Q 009308 201 L--------------SSWRVISTFTVSATGITLFI 221 (538)
Q Consensus 201 ~--------------~g~~~~F~i~~~~~~l~~~~ 221 (538)
+ .||+..|.+.++..++..++
T Consensus 155 ~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~ 189 (437)
T TIGR00792 155 IVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLII 189 (437)
T ss_pred HHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHH
Confidence 2 26888887776665544443
No 72
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.58 E-value=3.1e-12 Score=139.37 Aligned_cols=149 Identities=13% Similarity=0.080 Sum_probs=113.0
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHh
Q 009308 69 NYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVG 148 (538)
Q Consensus 69 g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g 148 (538)
+.+..+.+++.+.+..+..++.++.|+++||+ |||+++.++.+++.++.++..++.... ...+...++++|++.|+|
T Consensus 52 ~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~-Grr~~~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~r~l~G~~ 128 (502)
T TIGR00887 52 PLPSSVSAAVNGSASIGTLAGQLFFGWLADKL-GRKRVYGMELIIMIIATVASGLSPGSS--PKSVMATLCFWRFWLGVG 128 (502)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHccCcc--cchHHHHHHHHHHHHHHH
Confidence 45677788999999999999999999999995 999999999999999887766643100 001256899999999999
Q ss_pred chhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh---------------------------
Q 009308 149 KAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL--------------------------- 201 (538)
Q Consensus 149 ~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~--------------------------- 201 (538)
.|+..+..+.+++|.+|+ ++ |.+..++++.+.++|.++++.+
T Consensus 129 ~g~~~~~~~~~~~e~~p~--------~~---Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (502)
T TIGR00887 129 IGGDYPLSAIITSEFATK--------KW---RGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVP 197 (502)
T ss_pred HhhhhHHHHHHHHHhcCh--------hh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccc
Confidence 999999999999999987 33 3455566777778877776543
Q ss_pred ---hhhhHHHHHHHHHHHHHHHH--HHhcccceee
Q 009308 202 ---SSWRVISTFTVSATGITLFI--FRLGIRFFHS 231 (538)
Q Consensus 202 ---~g~~~~F~i~~~~~~l~~~~--~~~~~~~~~~ 231 (538)
.+||+.|.+.++..++..+. ++.++|+|..
T Consensus 198 ~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~ 232 (502)
T TIGR00887 198 AVDYMWRILIGFGAVPALLALYFRLTIPETPRYTA 232 (502)
T ss_pred hhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHH
Confidence 15999998776655544332 3446666643
No 73
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.57 E-value=1.7e-12 Score=154.97 Aligned_cols=129 Identities=8% Similarity=0.020 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHH--HHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhch
Q 009308 73 VEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTI--SCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKA 150 (538)
Q Consensus 73 ~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~--~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g 150 (538)
...++..+++.....++.+++|+++||+ |||+++..... +...+..++.... .+++.++++|+++|++.+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~~~~~~~-------~s~~~l~~~~~l~gi~~a 123 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALAIYGFHL-------NSVPLLFAALFLMGIHSA 123 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHHHHHHHH-------hhHHHHHHHHHHHHHHHH
Confidence 3467777888898999999999999995 99998643222 2222222222221 147789999999999999
Q ss_pred hhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-------hhhhHHHHHHHHHHHHHHH
Q 009308 151 GMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL-------SSWRVISTFTVSATGITLF 220 (538)
Q Consensus 151 ~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~-------~g~~~~F~i~~~~~~l~~~ 220 (538)
+..|...+++.|.+++ +++..+.++..++.++|.++|+.+ .||+..|.+..+..+++++
T Consensus 124 ~~~p~~~a~l~~~~~~-----------~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~ 189 (1140)
T PRK06814 124 LFGPIKYSILPDHLNK-----------DELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWL 189 (1140)
T ss_pred hhchHHHHhhHhhcCc-----------cccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHH
Confidence 9999999999999976 245678888999999999998876 6888888444444444333
No 74
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.56 E-value=3.1e-14 Score=147.06 Aligned_cols=168 Identities=14% Similarity=0.072 Sum_probs=144.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHH
Q 009308 34 FCKAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTIS 113 (538)
Q Consensus 34 ~~~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~ 113 (538)
..+.+..+..+++.||.--|.+...+ .=.++.+ |.+++..|.+...|.....++.++.|+++||| .||+.+.+|..+
T Consensus 31 ~~~~l~il~~vnlmny~Dr~~iagv~-~~v~~~f-ni~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~vG~~i 107 (493)
T KOG1330|consen 31 PTLTLVILCLVNLMNYADRYTIAGVL-KEVQTYF-NISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAVGIFI 107 (493)
T ss_pred chHHHHHHHHHHHHHHhhhhhhhhhh-HHHHHhc-CCCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEeeHHHH
Confidence 44667778889999999988666633 3455678 99999999999999999999999999999997 999999999999
Q ss_pred HHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHH
Q 009308 114 CILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFF 193 (538)
Q Consensus 114 ~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~ni 193 (538)
..+..+...++. ..+.+.+.|.+.|+|.+...|..+++++|.+++ ++|++.+.+||+++++
T Consensus 108 W~~Av~~~~fs~--------~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~-----------~~Rs~~~~ify~~ipv 168 (493)
T KOG1330|consen 108 WTLAVFASGFSN--------HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPD-----------DKRSRVLGIFYFAIPV 168 (493)
T ss_pred HHHHHHHHHHHH--------HHHHHHHHHHHhccchhhhcccchhHhhhcCcc-----------hhhhHHHHHhhhhccc
Confidence 999888877774 688999999999999999999999999999987 4678999999999999
Q ss_pred HHHHHHHh--------hhhhHHHHHHHHHHHHHHH-HHH
Q 009308 194 SVIASVQL--------SSWRVISTFTVSATGITLF-IFR 223 (538)
Q Consensus 194 G~~i~~~~--------~g~~~~F~i~~~~~~l~~~-~~~ 223 (538)
|+.+|... ..||++|...+++.++..+ +++
T Consensus 169 GsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~ 207 (493)
T KOG1330|consen 169 GSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFL 207 (493)
T ss_pred ccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHh
Confidence 99999775 3499999887776664444 444
No 75
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.55 E-value=8e-12 Score=131.13 Aligned_cols=148 Identities=8% Similarity=-0.018 Sum_probs=102.8
Q ss_pred HHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCch----HHHHHHHHHHHHhHHHH
Q 009308 46 FSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRL----NVIFYSTISCILGLVLL 121 (538)
Q Consensus 46 ~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~----~~i~~~~~~~~~G~~ll 121 (538)
++-.+++....+.++.|+++ + |.|..++|.+.+.+.....++.+++|.++||+ ||+ +.+.++..+..+ .+
T Consensus 14 ~~~~~~~g~~~p~l~~~l~~-~-g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~---~~ 87 (382)
T PRK11128 14 FGYFFAYGVFLPFWSVWLKG-Q-GYTPETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLLFAV---AF 87 (382)
T ss_pred HHHHHHHHHHhhhHHHHHHh-c-CCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHHHHH---HH
Confidence 33445666667778888865 8 99999999999999999999999999999995 984 333322222211 11
Q ss_pred HhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh
Q 009308 122 FITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL 201 (538)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~ 201 (538)
...+ .+.+.+++.|++.+++.+...|...++..|..++ +...++......++|..+|+.+
T Consensus 88 ~~~~-------~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~~~~-------------~~~a~~~~~~~~~lg~~igp~l 147 (382)
T PRK11128 88 WFGA-------HSFWLLFVAIGLFNLFFSPLVPLTDALANTWQKQ-------------IGLDYGKVRLWGSIAFVIGSAL 147 (382)
T ss_pred HHhc-------ccHHHHHHHHHHHHHHHcccccHHHHHHHHHHhh-------------ccCCcchHHHHHHHHHHHHHHH
Confidence 1111 1467788899999999999999888887776221 2233444555667777777665
Q ss_pred -------hhhhHHHHHHHHHHHHHH
Q 009308 202 -------SSWRVISTFTVSATGITL 219 (538)
Q Consensus 202 -------~g~~~~F~i~~~~~~l~~ 219 (538)
.||+..|.+.++..++..
T Consensus 148 gg~l~~~~g~~~~f~~~~~~~~~~~ 172 (382)
T PRK11128 148 TGKLVSWFGEQAILWILTAGVASML 172 (382)
T ss_pred HHHHHHHcChhHHHHHHHHHHHHHH
Confidence 599999987665444433
No 76
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.53 E-value=2.1e-11 Score=132.48 Aligned_cols=164 Identities=15% Similarity=0.152 Sum_probs=116.3
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhcc----CCchHH-HHHHHH
Q 009308 38 ALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAF----SGRLNV-IFYSTI 112 (538)
Q Consensus 38 ~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~----lGr~~~-i~~~~~ 112 (538)
...++..-+..-+.++-..+.++.++++ . |.+.++.+... . .+..+++.++.|.++||+ +||||. +.++.+
T Consensus 14 ~~~~~~l~~~~gl~~~~~~~~l~~~l~~-~-g~~~~~ig~~~-~-~~~~~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i 89 (491)
T PRK11010 14 SAILLILGFASGLPLALTSGTLQAWMTV-E-NIDLKTIGFFS-L-VGQAYVFKFLWSPLMDRYTPPFLGRRRGWLLATQL 89 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-C-CCCHHHHHHHH-H-HHHHHHHHHHHHHHHHcccccCCCCchHHHHHHHH
Confidence 3334444555666666667777888775 6 88888888862 2 222367899999999993 299986 667777
Q ss_pred HHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHH
Q 009308 113 SCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFF 192 (538)
Q Consensus 113 ~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~n 192 (538)
...++...+.+.. | ..+.+.+.+.+++.+++.+...+...++..|.+|+ +| +.+..++...+.+
T Consensus 90 ~~~~~~~~~a~~~--~---~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~--------~~---rg~~~~i~~~g~~ 153 (491)
T PRK11010 90 LLLVAIAAMGFLE--P---GTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPA--------EE---RGAGAAISVLGYR 153 (491)
T ss_pred HHHHHHHHHHHcC--C---cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCh--------hh---hHHHHHHHHHHHH
Confidence 7777766665532 1 12467788889999999999999999999999876 23 3444566667778
Q ss_pred HHHHHHHHh--------hhhhHHHHHHHHHHHHHHHH
Q 009308 193 FSVIASVQL--------SSWRVISTFTVSATGITLFI 221 (538)
Q Consensus 193 iG~~i~~~~--------~g~~~~F~i~~~~~~l~~~~ 221 (538)
+|.++++.+ .||+..|.+.++..++..+.
T Consensus 154 lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~ 190 (491)
T PRK11010 154 LAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIA 190 (491)
T ss_pred HHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 888777643 38999999877666555443
No 77
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.53 E-value=1.8e-12 Score=134.48 Aligned_cols=145 Identities=12% Similarity=0.133 Sum_probs=113.3
Q ss_pred HHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccc
Q 009308 51 VDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAA 130 (538)
Q Consensus 51 ~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~ 130 (538)
.++....++.+.+.+++ |.+.++++++.+.+.....++.++.|+++||+ ||||++.++.++..++.++. ...
T Consensus 14 ~~~~~~~~~lp~l~~~~-~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~-~~~----- 85 (355)
T TIGR00896 14 PALTSVGPLLPQIRSAL-GMSFSVAGLLTALPVLCFAVLAPLAPWLARRF-GEERSVAAGLLLIAAGILIR-SAP----- 85 (355)
T ss_pred CccccCcccHHHHHHHh-CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CchHHHHHHHHHHHHHHHHH-Hhc-----
Confidence 34444455666777789 99999999999999999999999999999995 99999999999888877665 322
Q ss_pred cchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-------h-
Q 009308 131 SPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL-------S- 202 (538)
Q Consensus 131 ~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~-------~- 202 (538)
+...++++|++.|+|.|...+..+....|.+++ ++.+..+.+..+.++|..+++.+ .
T Consensus 86 ---~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~ 150 (355)
T TIGR00896 86 ---GTALLFAGTALIGVGIAIINVLLPSLIKRDFPQ------------RVGLMTGLYSMALMGGAALAAAATVPLAQHSG 150 (355)
T ss_pred ---cHHHHHHHHHHHHHHHHHHhccchHHHHHhCcc------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 456778999999999999999988888887643 34456677777888888877654 2
Q ss_pred -hhhHHHHHHHHHHHHH
Q 009308 203 -SWRVISTFTVSATGIT 218 (538)
Q Consensus 203 -g~~~~F~i~~~~~~l~ 218 (538)
+|+..|.+.++..++.
T Consensus 151 ~~w~~~f~~~~~~~~~~ 167 (355)
T TIGR00896 151 GHWQQALAWWALPALLA 167 (355)
T ss_pred hhHHHHHHHHHHHHHHH
Confidence 3888887655544433
No 78
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.51 E-value=5.2e-12 Score=135.14 Aligned_cols=145 Identities=10% Similarity=0.028 Sum_probs=114.8
Q ss_pred HHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHHH
Q 009308 58 VLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKRL 137 (538)
Q Consensus 58 ~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~ 137 (538)
...+++++ . |.+.++++++.+.+.....++.++.|+++||+ |||+.+..+.++..++.+++....... .+...
T Consensus 48 ~~~p~~~~-~-g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 120 (438)
T TIGR00712 48 LAMPYLVE-Q-GFSKGELGFALSAISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILSAAVMLLMGFVPWAT----SSIAI 120 (438)
T ss_pred hhhHHHHH-c-CCCHhHhHHHHHHHHHHHHHhhhccchhhhcc-CCceehHHHHHHHHHHHHHHhcccccc----chHHH
Confidence 34566765 8 99999999999999999999999999999995 999999999999998887765432110 13556
Q ss_pred HHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh--------hhhhHHHH
Q 009308 138 ILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL--------SSWRVIST 209 (538)
Q Consensus 138 ~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~--------~g~~~~F~ 209 (538)
+++.|++.|++.|...+.....+.|.+|+ + ++....++++.+.++|..+++.+ .+|+..|+
T Consensus 121 l~~~~~l~g~~~g~~~~~~~~~i~~~~~~--------~---~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~ 189 (438)
T TIGR00712 121 MFVLLFLNGWFQGMGWPPCGRTMVHWWSQ--------S---ERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALY 189 (438)
T ss_pred HHHHHHHHHHHhhcchHHHHHHHHHhcCc--------c---cchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHH
Confidence 78889999999999989899999999876 2 34566777788888888777543 58999999
Q ss_pred HHHHHHHHHHH
Q 009308 210 FTVSATGITLF 220 (538)
Q Consensus 210 i~~~~~~l~~~ 220 (538)
+.++..++..+
T Consensus 190 ~~~~~~~i~~~ 200 (438)
T TIGR00712 190 FPAICAIIVAL 200 (438)
T ss_pred HHHHHHHHHHH
Confidence 87776655443
No 79
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.51 E-value=4.1e-12 Score=132.09 Aligned_cols=161 Identities=11% Similarity=0.023 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHhHHHHHHHhcccC-CCCChHHHHHHHH--HHHHH---HHHHHHHhhhhhhccCCchHHHHHHHHHHHHh
Q 009308 44 LIFSHKLVDIAVVAVLITYLTDYP-RNYNVVEAARLVN--LQEGI---SASTVIFLTCIPDAFSGRLNVIFYSTISCILG 117 (538)
Q Consensus 44 ~~~~er~~~~g~~~~l~~yl~~~l-~g~s~~~a~~i~~--~~~~~---~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G 117 (538)
.|.++|+.+- .+..++.++. .+.++++.+...+ .+... ..++.++.|+++||+ ||||++.++.++..++
T Consensus 4 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~l~~~~~~~~~~ 78 (394)
T TIGR00883 4 VEWFDFYLYG----FAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRI-GRKKTLVITLLMMGIG 78 (394)
T ss_pred hhHHHHHHHH----HHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhh-hhHHHHHHHHHHHHHH
Confidence 4455554442 4555555443 0233444444433 33322 235789999999995 9999999999999999
Q ss_pred HHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHH
Q 009308 118 LVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIA 197 (538)
Q Consensus 118 ~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i 197 (538)
.++..++...+.........++++|++.|+|.|...+...++++|.+++ + +|....++...+.++|.++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~--------~---~r~~~~~~~~~~~~~G~~i 147 (394)
T TIGR00883 79 TLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPP--------G---KRGFYGSFQQVGAPVGLLL 147 (394)
T ss_pred HHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCc--------c---cchHHHHHHHHHHHHHHHH
Confidence 8887766421100000123578899999999999999999999999875 2 3345567777788888888
Q ss_pred HHHh---------------hhhhHHHHHHHHHHHHHHH
Q 009308 198 SVQL---------------SSWRVISTFTVSATGITLF 220 (538)
Q Consensus 198 ~~~~---------------~g~~~~F~i~~~~~~l~~~ 220 (538)
++.+ .+|++.|.+..+..+++..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 185 (394)
T TIGR00883 148 AALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLY 185 (394)
T ss_pred HHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHH
Confidence 7653 3799999877665555443
No 80
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.49 E-value=7.3e-12 Score=129.82 Aligned_cols=148 Identities=14% Similarity=0.077 Sum_probs=105.2
Q ss_pred hHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhcc----CCchHH-HHHHHHHHHHhHHHHHhhhcccc
Q 009308 55 VVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAF----SGRLNV-IFYSTISCILGLVLLFITAFEEA 129 (538)
Q Consensus 55 ~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~----lGr~~~-i~~~~~~~~~G~~ll~~~~~~~~ 129 (538)
+.....+.+.+++ |.|.++.+...... ... ...++.|.++||+ +||||. +..+.++..+..+.+.+...
T Consensus 6 ~~~~~~~~~~~~~-g~s~~~~g~~~~~~-~~~-~~~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~--- 79 (356)
T TIGR00901 6 LVGNTLPYWLRSK-NVSLKTIGFFSLVG-LPY-SLKFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVP--- 79 (356)
T ss_pred hHHhHHHHHHHHc-CCCHHHHHHHHHHH-HHH-HHHHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCc---
Confidence 3344444455569 99999999996542 222 3488999999996 499997 46667777766555544321
Q ss_pred ccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-------h
Q 009308 130 ASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL-------S 202 (538)
Q Consensus 130 ~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~-------~ 202 (538)
..+.+.++...++.+++.+...+...+++.|.+|+ + +|..+.++...+.++|.++++.+ .
T Consensus 80 --~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~--------~---~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~ 146 (356)
T TIGR00901 80 --STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSD--------E---ELGYGSTIYIVGYRAGMLLSGSLALVLASPE 146 (356)
T ss_pred --chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH--------h---hhchHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 12455566666778888899999999999999865 2 34556677778888888888765 5
Q ss_pred h--------hhHHHHHHHHHHHHHHHH
Q 009308 203 S--------WRVISTFTVSATGITLFI 221 (538)
Q Consensus 203 g--------~~~~F~i~~~~~~l~~~~ 221 (538)
| |+..|.+.++..+++.++
T Consensus 147 g~~~~~~~~wr~~f~i~ai~~l~~~~~ 173 (356)
T TIGR00901 147 FANTGLITLWGYIFFWTALLILPGLLV 173 (356)
T ss_pred ccccccccccHHHHHHHHHHHHHHHHH
Confidence 6 999999888776665544
No 81
>PRK09848 glucuronide transporter; Provisional
Probab=99.49 E-value=1.1e-11 Score=132.86 Aligned_cols=149 Identities=12% Similarity=0.087 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhcc---CCchHHH-HHHHHHHHHhHH
Q 009308 44 LIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAF---SGRLNVI-FYSTISCILGLV 119 (538)
Q Consensus 44 ~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~---lGr~~~i-~~~~~~~~~G~~ 119 (538)
.++...+++..+.+.+..|+++.+ |++..++|.+.........+..++.|+++||. +||||.. .++.+...+..+
T Consensus 16 g~~~~~~~~~~~~~~l~~y~~~~~-gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~ 94 (448)
T PRK09848 16 GDVANNFAFAMGALFLLSYYTDVA-GVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSV 94 (448)
T ss_pred chHHhHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHH
Confidence 566677777777788889999999 99999999999999999999999999999994 4777744 566665555444
Q ss_pred HHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehh--hHHHHHHHHHH
Q 009308 120 LLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVW--WLIPFFFSVIA 197 (538)
Q Consensus 120 ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~--~y~~~niG~~i 197 (538)
++..... ..+.......+++...+.+++.++..+...++..+..++ ++||.+....-.+ ...+.++|..+
T Consensus 95 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~-------~~~r~~~~~~r~~~~~~~~~~~~~~~ 166 (448)
T PRK09848 95 LVFWVPT-DWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQ-------PQSRARLGAARGIAASLTFVCLAFLI 166 (448)
T ss_pred HHHhCcC-CCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCC-------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4321110 001112234445556678888999998888888877644 4555432211111 11234556666
Q ss_pred HHHh
Q 009308 198 SVQL 201 (538)
Q Consensus 198 ~~~~ 201 (538)
++.+
T Consensus 167 ~p~i 170 (448)
T PRK09848 167 GPSI 170 (448)
T ss_pred HHHH
Confidence 6655
No 82
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.49 E-value=3.5e-11 Score=123.54 Aligned_cols=163 Identities=10% Similarity=-0.020 Sum_probs=133.2
Q ss_pred HHHHHHHHHHHHHhHHHH---HHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhH
Q 009308 42 LGLIFSHKLVDIAVVAVL---ITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGL 118 (538)
Q Consensus 42 ~~~~~~er~~~~g~~~~l---~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~ 118 (538)
+...++--.+||-++-++ .+++.++. ++|.+|.|.+.+.+..+.-++-.+.|.++||. +.|+.+-.++++.++..
T Consensus 31 f~~~fiGYa~fYl~RknF~~a~p~l~e~~-~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-npr~fm~~gLilsai~n 108 (448)
T COG2271 31 FLSIFIGYAAFYLTRKNFNLAMPALIEDG-GLSKTQLGILGSAFSITYGVSKFVMGVLSDRS-NPRYFMAFGLILSAIVN 108 (448)
T ss_pred HHHHHHHHHHHHHHHHhHhhccHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-CCceeehHHHHHHHHHH
Confidence 334444555777666664 46777788 89999999999999999999999999999995 99999999999999988
Q ss_pred HHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHH
Q 009308 119 VLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIAS 198 (538)
Q Consensus 119 ~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~ 198 (538)
+++.+++ +.+.+.+..++.|.-+|+--|.+.-.++..++. +||+ +..+.+..+-|+|..+.
T Consensus 109 il~Gfs~--------s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr--------~eRG---~~~siWn~shNiGGal~ 169 (448)
T COG2271 109 ILFGFSP--------SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSR--------KERG---TWWSIWNTSHNIGGALA 169 (448)
T ss_pred HHHhhhh--------HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCc--------cccC---ceEEEehhhhhcccchH
Confidence 8888876 477888999999999999999999999999987 4555 45555566999999887
Q ss_pred HHh---------hhhhHHHHHHHHHHH-HHHHHHHhc
Q 009308 199 VQL---------SSWRVISTFTVSATG-ITLFIFRLG 225 (538)
Q Consensus 199 ~~~---------~g~~~~F~i~~~~~~-l~~~~~~~~ 225 (538)
+.+ .+|+.+|++|+++.+ ++++.+...
T Consensus 170 ~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~ 206 (448)
T COG2271 170 PLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLL 206 (448)
T ss_pred HHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHh
Confidence 665 399999999887665 444444443
No 83
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.48 E-value=1.1e-10 Score=125.39 Aligned_cols=175 Identities=12% Similarity=0.041 Sum_probs=124.6
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhc---cCCchHHHHHH-HHHH
Q 009308 39 LILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDA---FSGRLNVIFYS-TISC 114 (538)
Q Consensus 39 ~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~---~lGr~~~i~~~-~~~~ 114 (538)
..+....+.-.++|--..+.+.+|++ .+ |.+...++.+...-.....+..++.|+++|| .+||||.++++ .+..
T Consensus 7 i~~~~~~~Giq~~~~l~~~~l~~yl~-~l-g~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~ 84 (477)
T TIGR01301 7 LRVASVAAGVQFGWALQLSLLTPYVQ-EL-GIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALV 84 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-Hc-CCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHH
Confidence 33444445556677666777788775 59 9999999999999999999999999999995 46999998875 5555
Q ss_pred HHhHHHHHhhhcccc-------cc--chhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeeh
Q 009308 115 ILGLVLLFITAFEEA-------AS--PLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRV 185 (538)
Q Consensus 115 ~~G~~ll~~~~~~~~-------~~--~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~ 185 (538)
+++.+++..+..... .. ......+.++..+.-++....++...++++|..|+ + + ++.+.+++
T Consensus 85 ~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~-----~---~-~~~~~a~~ 155 (477)
T TIGR01301 85 AFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGG-----D---A-RRTRIANA 155 (477)
T ss_pred HHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCc-----h---h-HHHHHHHH
Confidence 566666655432110 00 01123556666677788888889999999999986 1 1 12345778
Q ss_pred hhHHHHHHHHHHHHHh--h--------------------hhhHHHHHHHHHHHHHHHHHHh
Q 009308 186 WWLIPFFFSVIASVQL--S--------------------SWRVISTFTVSATGITLFIFRL 224 (538)
Q Consensus 186 ~~y~~~niG~~i~~~~--~--------------------g~~~~F~i~~~~~~l~~~~~~~ 224 (538)
++.+..++|.++|+.+ + +.+..|.+.++.++++..+...
T Consensus 156 ~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~ 216 (477)
T TIGR01301 156 YFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALS 216 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHee
Confidence 8889999999999775 1 4566788887777766665444
No 84
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.48 E-value=1.4e-11 Score=130.72 Aligned_cols=130 Identities=15% Similarity=0.091 Sum_probs=106.5
Q ss_pred HhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccch
Q 009308 54 AVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPL 133 (538)
Q Consensus 54 g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~ 133 (538)
++..++.+.+++++ |.+..+++++.+.+..+..++.+++|++.||+ |||+++.++..++++|.++...++.. .
T Consensus 20 ~~~~~l~~~~~~~~-~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~-G~r~~~~~g~~l~~~g~~l~~~~~~~-----~ 92 (410)
T TIGR00885 20 DITNPMVPQFQQAF-TLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL-SYKAGILLGLFLYALGAFLFWPAAEI-----M 92 (410)
T ss_pred HhHHHHHHHHHHHh-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHHhh-----c
Confidence 57777778888899 99999999999999999999999999999995 99999999999999998776544321 1
Q ss_pred hHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh
Q 009308 134 LKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL 201 (538)
Q Consensus 134 ~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~ 201 (538)
+++.++++|++.|+|.|...+..++++.+..|+ +++. +..+......++|..+++.+
T Consensus 93 ~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~--------~~~~---~~~~~~~~~~~lG~~~g~~i 149 (410)
T TIGR00885 93 NYTLFLVGLFILTAGLGFLETAANPYILVMGPE--------STAT---RRLNLAQSFNPFGSIIGMVV 149 (410)
T ss_pred cHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCH--------hHHH---HHHHHHHHHHHHHHHHHHHH
Confidence 477889999999999999999999999998765 2222 23455566677777777654
No 85
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.48 E-value=4.9e-12 Score=131.13 Aligned_cols=143 Identities=10% Similarity=-0.032 Sum_probs=110.7
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHH
Q 009308 37 AALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCIL 116 (538)
Q Consensus 37 ~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~ 116 (538)
.++..+...+....+++...+.++.++++++ |.+..+++++.+.+.....++++++|+++||+ |||+++.++.++..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i 79 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDL-GLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAI 79 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHh-CCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHH
Confidence 3455556666666677766666666798899 99999999999999999999999999999995 999999999999999
Q ss_pred hHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHH
Q 009308 117 GLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVI 196 (538)
Q Consensus 117 G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~ 196 (538)
+.+++..+.. +.+.++++|++.|++.+.. +...++++|.+|+ ++ +....+++....++|..
T Consensus 80 ~~~~~~~~~~-------~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~--------~~---r~~~~~~~~~~~~~g~~ 140 (366)
T TIGR00886 80 PCLWAGLAVQ-------SYSVLLLLRLFIGIAGGSF-ASCMPWISFFFPK--------KI---QGTALGLAAGWGNMGGG 140 (366)
T ss_pred HHHHHHHHhh-------hHHHHHHHHHHHHHhchhh-HhHHHHHHHhcCH--------hh---hhHHHHHHHHHhHHHHH
Confidence 9888776530 3667889999999997665 5567899999875 23 33445555555566665
Q ss_pred HHHH
Q 009308 197 ASVQ 200 (538)
Q Consensus 197 i~~~ 200 (538)
+++.
T Consensus 141 ~~~~ 144 (366)
T TIGR00886 141 VAQF 144 (366)
T ss_pred HHHH
Confidence 5543
No 86
>PRK09669 putative symporter YagG; Provisional
Probab=99.40 E-value=1.1e-10 Score=125.14 Aligned_cols=162 Identities=12% Similarity=0.058 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhcc---CCch-HHHHHHHHHHHHhHH
Q 009308 44 LIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAF---SGRL-NVIFYSTISCILGLV 119 (538)
Q Consensus 44 ~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~---lGr~-~~i~~~~~~~~~G~~ 119 (538)
.++...+.+..+...+..|+++.+ |.+.+.+|.+..+......+..++.|+++||. +||| +-++++.+...+..+
T Consensus 17 g~~~~~~~~~~~~~~l~~~~t~~~-gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~ 95 (444)
T PRK09669 17 GDTACNLVWQTVMLFLAYFYTDVF-GLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCL 95 (444)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHH
Confidence 345555566667778899999999 99999999999999999999999999999993 4885 455677777777765
Q ss_pred HHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHH
Q 009308 120 LLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASV 199 (538)
Q Consensus 120 ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~ 199 (538)
++.... ..+.......+++...+.+++..++.....++.+|..++ ++||. +..++.....++|..++.
T Consensus 96 l~f~~p--~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~-------~~eR~---~l~~~r~~~~~~G~~i~~ 163 (444)
T PRK09669 96 LTFYTP--DFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITND-------PRERH---SLQSWRFALSFIGGLIVS 163 (444)
T ss_pred HHHhCC--CCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCC-------HHHHH---HHHHHHHHHHHHHHHHHH
Confidence 544321 111112344555556666766667888888999998743 45554 344555667778777665
Q ss_pred Hh--------------hhhhHHHHHHHHHHHHH
Q 009308 200 QL--------------SSWRVISTFTVSATGIT 218 (538)
Q Consensus 200 ~~--------------~g~~~~F~i~~~~~~l~ 218 (538)
.+ .||+..+.+.++..++.
T Consensus 164 ~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~ 196 (444)
T PRK09669 164 VIALPLVDILGKGDEQKGYFYAMMVMGLLGVVL 196 (444)
T ss_pred HHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHH
Confidence 42 25666665555444433
No 87
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.39 E-value=7.2e-10 Score=117.17 Aligned_cols=150 Identities=9% Similarity=0.056 Sum_probs=109.3
Q ss_pred HHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhcc----CCchH-HHHHHHHHHHHhHHHHHhhh
Q 009308 51 VDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAF----SGRLN-VIFYSTISCILGLVLLFITA 125 (538)
Q Consensus 51 ~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~----lGr~~-~i~~~~~~~~~G~~ll~~~~ 125 (538)
.+.=....++.|+++ . |+|.++.|.+...... ++..++.|.++||+ +|||| .+.++.++.+++.+++.+..
T Consensus 14 ~~~~~~~~~~~~l~~-~-g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~ 89 (402)
T PRK11902 14 PLALTSGTLQAWMTV-E-GLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCP 89 (402)
T ss_pred hHHHHHHHHHHHHHH-c-CCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcC
Confidence 333355667888875 7 9999999999655554 79999999999995 27876 68888888887777666542
Q ss_pred ccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh----
Q 009308 126 FEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL---- 201 (538)
Q Consensus 126 ~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~---- 201 (538)
. ..+.+.+++..++.++..+...|...++..|.+|+ + ++.++.++...+.++|.+++..+
T Consensus 90 ~-----~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~--------~---~r~~~~~~~~~g~~~g~i~g~~l~~~l 153 (402)
T PRK11902 90 P-----HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHP--------E---ERGAGAAVKVLGYRLAMLVSGGLALWL 153 (402)
T ss_pred c-----cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCh--------h---hhhHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 1 11455666666777888999999999999999865 2 23445566666777888777653
Q ss_pred ----hhhhHHHHHHHHHHHHHHH
Q 009308 202 ----SSWRVISTFTVSATGITLF 220 (538)
Q Consensus 202 ----~g~~~~F~i~~~~~~l~~~ 220 (538)
.||+..|.+.++..++..+
T Consensus 154 ~~~~~gw~~~f~i~a~~~l~~~l 176 (402)
T PRK11902 154 ADRVLGWGNTYLLMAGLMLAGAL 176 (402)
T ss_pred HhcccCHHHHHHHHHHHHHHHHH
Confidence 3899999987766655444
No 88
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.39 E-value=2e-10 Score=124.24 Aligned_cols=142 Identities=14% Similarity=0.036 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhc---cCCc-hHHHHHHHHHHHHhHH
Q 009308 44 LIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDA---FSGR-LNVIFYSTISCILGLV 119 (538)
Q Consensus 44 ~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~---~lGr-~~~i~~~~~~~~~G~~ 119 (538)
.++...+.+..+...+..|+++.+ |.+...+|.+.........+..++.|+++|| .+|| |+-++++.+..+++.+
T Consensus 14 g~~~~~~~~~~~~~~l~~yyt~v~-Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~ 92 (473)
T PRK10429 14 GAFGKDFAIGIVYMYLMYYYTDVV-GLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLF 92 (473)
T ss_pred chhHHhHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHH
Confidence 455666777777888999999999 9999999999999999999999999999993 1499 5566678888888766
Q ss_pred HHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHH
Q 009308 120 LLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIAS 198 (538)
Q Consensus 120 ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~ 198 (538)
++..... .+.......+++...+..++..+..+...++++|..++ ++||.+ .+++-....++|.++.
T Consensus 93 llf~~p~--~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~-------~~eR~~---l~~~~~~~~~ig~~~~ 159 (473)
T PRK10429 93 LLFSAHL--FEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLD-------KREREQ---LVPYPRFFASLAGFVT 159 (473)
T ss_pred HHHcCCC--CCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCC-------HHHHHH---HHHHHHHHHHHHHHHH
Confidence 6643211 11112234455555667788888899999999998743 556643 3344345556664444
No 89
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.38 E-value=7.6e-10 Score=118.15 Aligned_cols=145 Identities=12% Similarity=-0.050 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcc-cCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTD-YPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISC 114 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~-~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~ 114 (538)
|.+++.....+.-....+ +.+++...+.+ ++ |+|.+|.+++.+++.....++.++.|++.||+ |.|+++.++.++.
T Consensus 34 r~l~~s~~~f~~~F~~w~-~~~~l~~~~~~~~~-~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~-G~R~v~~~~~ll~ 110 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWM-LFSAVTVNLNKIGF-NFTTDQLFLLTALPSVSGALLRVPYSFMVPIF-GGRRWTVFSTAIL 110 (462)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhhc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHH
Confidence 455655555555555555 44455556544 79 99999999999999999999999999999995 9999999999999
Q ss_pred HHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHH
Q 009308 115 ILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFS 194 (538)
Q Consensus 115 ~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG 194 (538)
.++++++.++.... ..++..+++.|++.|++ |...+.....+++.+|+ + ++..+.+++.-..|+|
T Consensus 111 ~i~~~~~~~a~~~~---~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~--------~---~rG~A~Gi~~g~G~~G 175 (462)
T PRK15034 111 IIPCVWLGIAVQNP---NTPFGIFIVIALLCGFA-GANFASSMGNISFFFPK--------A---KQGSALGINGGLGNLG 175 (462)
T ss_pred HHHHHHHHHHHccc---CCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCH--------h---HhHHHHHHHHHHHhhH
Confidence 98888777641000 01477899999999998 66778899999999986 2 3445556665455666
Q ss_pred HHHH
Q 009308 195 VIAS 198 (538)
Q Consensus 195 ~~i~ 198 (538)
..++
T Consensus 176 ~~l~ 179 (462)
T PRK15034 176 VSVM 179 (462)
T ss_pred HHHH
Confidence 6544
No 90
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.36 E-value=2.5e-10 Score=121.67 Aligned_cols=140 Identities=12% Similarity=0.147 Sum_probs=111.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhccc
Q 009308 76 ARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHF 155 (538)
Q Consensus 76 ~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~ 155 (538)
+.++++|..+..++.+++|+++|++ |||++++++.++..++.++..++...+ ...++.+||++.|+..|.....
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~~s~~~~-----~~e~li~GR~i~Gl~~gl~~~~ 136 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMGLSKSAP-----SFEMLILGRLIVGLACGLSTGL 136 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHHHhh-----hHHHHHHHHHHHHHHhHHHHHH
Confidence 4567889999999999999999996 999999999999999888877765433 4779999999999999999999
Q ss_pred chhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh---------hhhhHHHHHHHHHHHHHHH--HHHh
Q 009308 156 LGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL---------SSWRVISTFTVSATGITLF--IFRL 224 (538)
Q Consensus 156 ~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~---------~g~~~~F~i~~~~~~l~~~--~~~~ 224 (538)
.+-|+.|..|+ +-|+ ..-....+++++|.+++..+ -.|++.+.++.+..++.++ .++.
T Consensus 137 ~pmyl~E~sP~--------~~RG---~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~P 205 (485)
T KOG0569|consen 137 VPMYLTEISPK--------NLRG---ALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLP 205 (485)
T ss_pred HHHHHhhcChh--------hhcc---HHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999886 3343 33344567889999988665 4699999887775554444 4555
Q ss_pred cccceeec
Q 009308 225 GIRFFHST 232 (538)
Q Consensus 225 ~~~~~~~~ 232 (538)
++|+|...
T Consensus 206 ESPk~Ll~ 213 (485)
T KOG0569|consen 206 ESPKYLLI 213 (485)
T ss_pred CCcchHHH
Confidence 78887665
No 91
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.34 E-value=1.1e-09 Score=118.26 Aligned_cols=162 Identities=18% Similarity=0.109 Sum_probs=116.0
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCC-----chHHHHHHHHH
Q 009308 39 LILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSG-----RLNVIFYSTIS 113 (538)
Q Consensus 39 ~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lG-----r~~~i~~~~~~ 113 (538)
..+...-+.+-+. +-+...+..++++++ |.+.++.+...+.....-.+-++ .|.++|++ + ||+.+.++.++
T Consensus 29 ~~~~~~y~~qGl~-~l~~~~~~~~l~~~l-g~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~-~i~G~rRr~~l~~~~~l 104 (468)
T TIGR00788 29 AIGLQVLFVKGIA-GLMRLPLSPMLTDDL-GLDGARYQRLVGLSSLGWALKPF-AGVMSDTF-PLFGYTKRWYLVLSGLL 104 (468)
T ss_pred HHHHHHHHHhhHH-HHhhhhhhHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhc-CCCCccchHHHHHHHHH
Confidence 3334455667777 667777888999899 99999999988888886666555 99999996 7 78888888776
Q ss_pred HH-HhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHH
Q 009308 114 CI-LGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFF 192 (538)
Q Consensus 114 ~~-~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~n 192 (538)
.. ++...+.... .......+.+++.+++.+...+...++..|+.++ ++.......++.|.+.+
T Consensus 105 ~~~~~~~~l~~~~-------~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~~---------~~~~~~~~~s~~~~~~~ 168 (468)
T TIGR00788 105 GSAILYGLLPGKV-------SSAKVAAAFIFLAALAKALYDVLVDSLYSERIRE---------SPSAGPSLVSWMWGASA 168 (468)
T ss_pred HHHHHHHhccccc-------chHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhc---------CCCcCCCeeeHHHHHHH
Confidence 63 3332222211 1223344578899999999999999999999863 11233445567777778
Q ss_pred HHHHHHHHh-------hhhhHHHHHHHHHHHHHHH
Q 009308 193 FSVIASVQL-------SSWRVISTFTVSATGITLF 220 (538)
Q Consensus 193 iG~~i~~~~-------~g~~~~F~i~~~~~~l~~~ 220 (538)
+|.++|..+ .+|+..|.+.++..++..+
T Consensus 169 ~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~ 203 (468)
T TIGR00788 169 TGGLISSLLGGPLLDKTLTRILFLITAALLLLQLF 203 (468)
T ss_pred HHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHH
Confidence 888887665 5899999888777766644
No 92
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.30 E-value=8.8e-10 Score=120.53 Aligned_cols=166 Identities=10% Similarity=0.204 Sum_probs=126.1
Q ss_pred HHHHHH---HHhHHHHHHHhcccCC----CCCh--HHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHh
Q 009308 47 SHKLVD---IAVVAVLITYLTDYPR----NYNV--VEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILG 117 (538)
Q Consensus 47 ~er~~~---~g~~~~l~~yl~~~l~----g~s~--~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G 117 (538)
.-.+++ .|..+.+..++++... ..+. ++.+++.+.+..++.++.++.|.++|++ |||++++++.+++.+|
T Consensus 54 ~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~-GRk~~l~~~~~~~~iG 132 (513)
T KOG0254|consen 54 GLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRI-GRKKTLLLAVVLFLIG 132 (513)
T ss_pred HHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHH
Confidence 333455 4677777666665210 2222 3458999999999999999999999995 9999999999999999
Q ss_pred HHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHH
Q 009308 118 LVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIA 197 (538)
Q Consensus 118 ~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i 197 (538)
.++...+. +..++++||++.|+|.|+....++.+++|..|+ + .|....+.+.+++++|.++
T Consensus 133 ~ii~~~a~--------~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~--------~---~RG~l~~~~~l~~~~Gi~~ 193 (513)
T KOG0254|consen 133 AIIIALAP--------SWYQLIVGRILTGLGVGGASVLAPVYISEIAPA--------H---IRGTLVSLYQLFITIGILL 193 (513)
T ss_pred HHHHHHhh--------hHHHHHHHHHHhccchhhhhhcchhhHhhcCCh--------h---hhHHHHHHHHHHHHHHHHH
Confidence 99999875 588999999999999999999999999999765 2 3445557778889999999
Q ss_pred HHHh---h-----hhhHHHHHHHHHHHHHH--HHHHhcccceeec
Q 009308 198 SVQL---S-----SWRVISTFTVSATGITL--FIFRLGIRFFHST 232 (538)
Q Consensus 198 ~~~~---~-----g~~~~F~i~~~~~~l~~--~~~~~~~~~~~~~ 232 (538)
+..+ . +||..+++..+..++.. ..+..++|++..+
T Consensus 194 ~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~ 238 (513)
T KOG0254|consen 194 GYCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIE 238 (513)
T ss_pred HHHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHH
Confidence 9776 2 79988876544443333 3333366665543
No 93
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.24 E-value=2.1e-08 Score=105.96 Aligned_cols=112 Identities=14% Similarity=0.140 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHh
Q 009308 44 LIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFI 123 (538)
Q Consensus 44 ~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~ 123 (538)
..+++-+.+-...+.+..|+++ . |+|..|+|.+.+.......++|++.|+++||+..++|.+.+..++..+...+...
T Consensus 10 ~~f~~f~~~G~~~p~~~~~L~~-~-G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~ 87 (400)
T PF03825_consen 10 MYFLYFFAYGAFLPYLPLYLES-R-GFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAF 87 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-C-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 4455556666677888999986 7 8999999999999999999999999999999756678777766666654444433
Q ss_pred hhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhcccc
Q 009308 124 TAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLR 165 (538)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~ 165 (538)
.. +.+.+++..++..+......|...++.-+..+
T Consensus 88 ~~--------~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~ 121 (400)
T PF03825_consen 88 SS--------SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG 121 (400)
T ss_pred hc--------cHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc
Confidence 32 34455566666677666666766666666554
No 94
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.22 E-value=1.2e-09 Score=116.49 Aligned_cols=167 Identities=14% Similarity=0.133 Sum_probs=116.4
Q ss_pred HHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhh----ccCCchHH-HHHHHHHHHHhHHH
Q 009308 46 FSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPD----AFSGRLNV-IFYSTISCILGLVL 120 (538)
Q Consensus 46 ~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD----~~lGr~~~-i~~~~~~~~~G~~l 120 (538)
+...+.+......+..|.++.+ |.+...++.+.........+..++.|+++| | +||||- +++|.++.+++.++
T Consensus 11 ~~~~~~~~~~~~~~~~f~~~~~-gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr-~Grrrp~~l~g~i~~~~~~~l 88 (428)
T PF13347_consen 11 LGYNMIWSLLSSYLLYFYTDVL-GLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTR-WGRRRPWILIGAILLALSFFL 88 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeeccc-ccccceEeehhhHHHHHHHHH
Confidence 3444455555667889999999 999999999999999999999999999999 6 587655 55788888888777
Q ss_pred HHhhhcccc-ccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHH
Q 009308 121 LFITAFEEA-ASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASV 199 (538)
Q Consensus 121 l~~~~~~~~-~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~ 199 (538)
+.... +.. +...+..++.+..++..++...+.....+++.|..++ ++||.+.. ++-.++.++|.++..
T Consensus 89 lf~~~-p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~-------~~~R~~l~---~~~~~~~~~g~~l~~ 157 (428)
T PF13347_consen 89 LFSPP-PAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPD-------PDERTRLS---SWRMIFSMIGSLLAS 157 (428)
T ss_pred hhccc-cchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCcccccc-------HhhhhhHH---HHHHHHHHHHHHHHH
Confidence 66431 100 1112344556777778999999999999999999865 45554444 444455666665433
Q ss_pred Hh-------------h-hhhHHHHHHHHHHHHHHHHHHhc
Q 009308 200 QL-------------S-SWRVISTFTVSATGITLFIFRLG 225 (538)
Q Consensus 200 ~~-------------~-g~~~~F~i~~~~~~l~~~~~~~~ 225 (538)
.+ . +|++...+.++..++..++....
T Consensus 158 ~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~ 197 (428)
T PF13347_consen 158 FLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFF 197 (428)
T ss_pred HHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhhe
Confidence 32 1 68887777666665555544433
No 95
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.19 E-value=4.2e-09 Score=111.25 Aligned_cols=145 Identities=12% Similarity=0.159 Sum_probs=121.9
Q ss_pred HHHHHHhcccCCCCChHH-HHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhH
Q 009308 57 AVLITYLTDYPRNYNVVE-AARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLK 135 (538)
Q Consensus 57 ~~l~~yl~~~l~g~s~~~-a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~ 135 (538)
+...+|+.+++ |+++++ .+.+.+.|..+..++.+++|+++|| +|.|+.+.++.+...+.++++.++. +.
T Consensus 46 s~a~p~L~~el-glT~~qv~G~I~s~F~ysYal~qIp~GlLaDr-lG~K~vL~l~~l~Wsl~t~L~~fa~--------Sl 115 (511)
T TIGR00806 46 SFITPYLLTVL-NFTEETVTNEIIPVLPYSHLAVLVPVFLLTDY-LRYKPVLVLQALSFVCVWLLLLLGT--------SV 115 (511)
T ss_pred HHHHHHHHHHc-CCCHHHhcchHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHHHHHH--------HH
Confidence 44678898899 999999 9999999999999999999999999 5999999999999999999988875 47
Q ss_pred HHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh------hhhhHH--
Q 009308 136 RLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL------SSWRVI-- 207 (538)
Q Consensus 136 ~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~------~g~~~~-- 207 (538)
..+.+.|++.|++.|..- ....++...+|+ +| +.++.+++..+.++|.++++.+ .||+.-
T Consensus 116 ~~L~i~R~llGvaEA~~~-A~~syI~~WfP~--------kE---R~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~ 183 (511)
T TIGR00806 116 WHMQLMEVFYSVTMAARI-AYSSYIFSLVPP--------SR---YQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYST 183 (511)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHCCH--------HH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHH
Confidence 789999999999999988 999999999987 34 4566677788999999998776 566654
Q ss_pred -HHHHHHHHHHHHHHHH
Q 009308 208 -STFTVSATGITLFIFR 223 (538)
Q Consensus 208 -F~i~~~~~~l~~~~~~ 223 (538)
..|+....++++++-+
T Consensus 184 Ln~Isl~s~~~a~~~a~ 200 (511)
T TIGR00806 184 LNIISLVFMTFSVFLAL 200 (511)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 4566666666665433
No 96
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.17 E-value=2.4e-09 Score=109.06 Aligned_cols=139 Identities=12% Similarity=-0.004 Sum_probs=115.2
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHHHHHHHHHHH
Q 009308 66 YPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKRLILIGVVLL 145 (538)
Q Consensus 66 ~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~ 145 (538)
.+ +.++++.|++.+.+.....+..++.|.+.|| +|+|-.+++|..++...++++++.. .+++++++|.++
T Consensus 100 ~~-~~e~~~iG~LFaskA~~qllvnp~~G~l~~~-iGy~ipm~~Gl~vmf~sTilFafg~--------sy~~l~vAR~LQ 169 (464)
T KOG3764|consen 100 SL-DRENTQIGLLFASKALVQLLVNPFFGNLIDR-IGYKIPMVAGLFVMFLSTILFAFGN--------SYPMLFVARSLQ 169 (464)
T ss_pred Cc-cccccchhHHHHHHHHHHHHhcccchhhHHH-hccccHHHHHHHHHHHHHHHHHHcc--------hhHHHHHHHHHh
Confidence 35 6788999999999999999999999999999 6999999999999999999999886 477999999999
Q ss_pred HHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-------hhhhHHHHHHHHHHHHH
Q 009308 146 AVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL-------SSWRVISTFTVSATGIT 218 (538)
Q Consensus 146 g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~-------~g~~~~F~i~~~~~~l~ 218 (538)
|+|.++..++-.+++||.||+ | .|| ++..+.---++.+|.++|+-+ .|++..|++.++.+++.
T Consensus 170 gvgsA~~~tsglamlAd~f~~------d-~er---~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld 239 (464)
T KOG3764|consen 170 GVGSAFADTSGLAMLADVFPE------D-NER---GSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLD 239 (464)
T ss_pred hhhHHHHHhhhHHHHHHHccc------c-hhh---hHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHH
Confidence 999999999999999999987 2 333 344444444556666666543 79999999988888766
Q ss_pred HHHHHh
Q 009308 219 LFIFRL 224 (538)
Q Consensus 219 ~~~~~~ 224 (538)
..+-++
T Consensus 240 ~~L~l~ 245 (464)
T KOG3764|consen 240 GALQLL 245 (464)
T ss_pred HHHHHh
Confidence 665443
No 97
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.17 E-value=1.8e-08 Score=102.19 Aligned_cols=112 Identities=14% Similarity=0.153 Sum_probs=87.5
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHh
Q 009308 69 NYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVG 148 (538)
Q Consensus 69 g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g 148 (538)
+.+..-+|.+.+.|+....++++.-|.++|++ |||.++.++++..++.+.+...+. +...+.++|++.|+.
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~~S~--------~F~afv~aR~l~Gi~ 134 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWALSR--------NFAAFVLARFLGGIF 134 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHhhhhc
Confidence 45667899999999999999999999999997 999999999999999888877775 455677779999999
Q ss_pred chhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh
Q 009308 149 KAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL 201 (538)
Q Consensus 149 ~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~ 201 (538)
.|-.. .+-++++|.+++ ++|..-.+.+ ..+..+|.++||.+
T Consensus 135 kgnl~-v~rAiisdV~se--------k~r~l~ms~v---~~a~~lGfilGPmI 175 (451)
T KOG2615|consen 135 KGNLS-VIRAIISDVVSE--------KYRPLGMSLV---GTAFGLGFILGPMI 175 (451)
T ss_pred cCchH-HHHHHHHhhcCh--------hhccceeeee---ehhhhcchhhcchh
Confidence 98764 456899999876 3443333333 33555666666655
No 98
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.17 E-value=8.4e-10 Score=114.17 Aligned_cols=138 Identities=14% Similarity=0.076 Sum_probs=107.5
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHh
Q 009308 69 NYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVG 148 (538)
Q Consensus 69 g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g 148 (538)
+++....+.+..+-..+..+++++.||++|++ |||+.....++++++++++..++...+.+. .-..++..-|+++|+|
T Consensus 80 ~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~-GRK~vYG~~liImIi~t~~~~~s~~~~~~~-~~m~~L~~~R~~LGiG 157 (538)
T KOG0252|consen 80 HYPSGVLALVNAAALVGTIFGQLFFGWLGDKF-GRKKVYGKELIIMIICSALSGLSVGTTSPL-GVMMTLCFFRFLLGIG 157 (538)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-cchhhhhHHHHHHHHHHHHhccCCCCCCCc-chhhHHHHHHHHhhcc
Confidence 37778888888888888999999999999995 999999999999999998555443222111 2356788899999999
Q ss_pred chhhcccchhhhhccccccCccccCccccc-ceeeeehhhHHHHHHHHHHHHHh------------------hhhhHHHH
Q 009308 149 KAGMQHFLGPFLADQLRAHEPIKLNISEHR-VSARKRVWWLIPFFFSVIASVQL------------------SSWRVIST 209 (538)
Q Consensus 149 ~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~-~~~~~f~~~y~~~niG~~i~~~~------------------~g~~~~F~ 209 (538)
.|+-.|...+...|.... +.|+ .....|....+++-.|..++.++ .=||..|+
T Consensus 158 IGGDYPlSAtI~SE~an~--------~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~g 229 (538)
T KOG0252|consen 158 IGGDYPLSATIMSESANK--------KTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFG 229 (538)
T ss_pred ccCCCcchHHHhhhhhhh--------ccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHH
Confidence 999999999999998654 2333 34456677778888888888776 35999998
Q ss_pred HHHHHHH
Q 009308 210 FTVSATG 216 (538)
Q Consensus 210 i~~~~~~ 216 (538)
+.++..+
T Consensus 230 lg~vpa~ 236 (538)
T KOG0252|consen 230 LGAVPAL 236 (538)
T ss_pred HHHHHHH
Confidence 8765544
No 99
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.14 E-value=8.9e-09 Score=107.83 Aligned_cols=75 Identities=12% Similarity=0.022 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTI 112 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~ 112 (538)
+..|.+-...+.-.+++-...+.++.+++++. |+|.++.|.+.+.......+..++.|.++|| +|.||-+++...
T Consensus 7 ~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~-GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dk-lg~kK~Ll~~i~ 81 (412)
T PF01306_consen 7 KNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVA-GLSGTEIGIIFSAGSLFALLAQPVYGFISDK-LGLKKHLLWFIA 81 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHTHHHHHHHHHH-CTTCSHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHcccc-CCCHHHHHHHHHHHHHHHHHHHHhHHHhcch-hhhhHHHHHHHH
Confidence 45566666777777888888899999999889 9999999999999999999999999999999 587766554433
No 100
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.13 E-value=4.9e-08 Score=100.65 Aligned_cols=170 Identities=14% Similarity=0.035 Sum_probs=128.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
|.+++-..........+ .+.+.+..++.+++ ++|+.|.+++..+-.+...+..++-|++.||+ |-|++..++.++..
T Consensus 14 ~~L~~S~~af~v~F~VW-~l~s~l~~~i~~~~-~LS~~q~~ll~aiPil~GallRl~~g~l~drf-GgR~~~~~s~~l~~ 90 (417)
T COG2223 14 RNLWLSTLAFDVGFMVW-TLFSPLGVFIKSDF-GLSEGQKGLLVAIPILVGALLRLPYGFLTDRF-GGRKWTILSMLLLL 90 (417)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHhhhcccc-CCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc-CchHHHHHHHHHHH
Confidence 55554444443333333 36677888999999 99999999999999999999999999999996 88888888888888
Q ss_pred HhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHH
Q 009308 116 LGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSV 195 (538)
Q Consensus 116 ~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~ 195 (538)
+=.+.++++...+ +.+.+++..++.|++.|-+ ....++++..||+ ++...+..++. .-|+|.
T Consensus 91 IP~~~~~~a~~~~-----~~~~ll~~gll~G~~GasF-av~m~~~s~~fP~-----------~~qG~AlGI~g-~GN~G~ 152 (417)
T COG2223 91 IPCLGLAFAVTYP-----STWQLLVIGLLLGLAGASF-AVGMPNASFFFPK-----------EKQGLALGIAG-AGNLGV 152 (417)
T ss_pred HHHHHHHHHccCC-----chHHHHHHHHHHhccccee-hcccccccccCCh-----------hhhhHHHHHhc-cccccH
Confidence 8777777776433 3468888888899886654 5666889999987 13345556666 778888
Q ss_pred HHHHHh-------hh---hhHHHHHHHHHHHHHHHHHHhcc
Q 009308 196 IASVQL-------SS---WRVISTFTVSATGITLFIFRLGI 226 (538)
Q Consensus 196 ~i~~~~-------~g---~~~~F~i~~~~~~l~~~~~~~~~ 226 (538)
.+...+ .| |+..-.+..+.++++.+.+++..
T Consensus 153 av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~ 193 (417)
T COG2223 153 AVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGM 193 (417)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 766443 56 89888888888887777666543
No 101
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.13 E-value=2.9e-08 Score=108.69 Aligned_cols=146 Identities=14% Similarity=0.014 Sum_probs=112.8
Q ss_pred ccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHHHHHHHHHH
Q 009308 65 DYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKRLILIGVVL 144 (538)
Q Consensus 65 ~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l 144 (538)
+.. +.+...+....+++.++..+++++.|.++|+ +|||++++++.++++++.++.+++. +++.+.+.|++
T Consensus 111 ~~~-c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~-~GRk~~~~~~~~~~~i~~~~~a~a~--------~~~~~~~~Rfl 180 (521)
T KOG0255|consen 111 NLV-CDSSTLVALGQSLFFLGVLVGSLIFGPLSDR-FGRKPVLLVSLLLFIIFGILTAFAP--------NYWMFLIFRFL 180 (521)
T ss_pred cee-eCcHhHHHHHHHHHHHHHHHHHhhheehHhh-cccHHHHHHHHHHHHHHHHHHHHhC--------cHHHHHHHHHH
Confidence 345 6677888899999999999999999999999 6999999999999999887777765 68899999999
Q ss_pred HHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-----hhhhHHHHHHHHHHHHHH
Q 009308 145 LAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL-----SSWRVISTFTVSATGITL 219 (538)
Q Consensus 145 ~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~-----~g~~~~F~i~~~~~~l~~ 219 (538)
.|++.++...+...+++|.+++ +.|. ....+ +.....|+.+++.. -+||+.+++..+..++.+
T Consensus 181 ~G~~~~~~~~~~~~~~~E~~~~--------~~R~---~~~~~-~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~~~~~ 248 (521)
T KOG0255|consen 181 SGFFGSGPLTVGFGLVAEIVSP--------KQRG---LALTL-GGFFFVGGLMLPAGAAYITRDWRWLFWIISIPSGLFL 248 (521)
T ss_pred HHhhccchhHHhHhhheeecCc--------chhh---HHHHH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999876 3332 22233 33344444444333 689999998766666554
Q ss_pred HH-HHh-cccceeec
Q 009308 220 FI-FRL-GIRFFHST 232 (538)
Q Consensus 220 ~~-~~~-~~~~~~~~ 232 (538)
+. ++. ++++++..
T Consensus 249 ~~~~l~~Es~rwl~~ 263 (521)
T KOG0255|consen 249 LLWFLPPESPRWLLS 263 (521)
T ss_pred HHHHccCcChHHHHH
Confidence 44 333 56666554
No 102
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.11 E-value=1.2e-08 Score=110.85 Aligned_cols=160 Identities=15% Similarity=0.086 Sum_probs=115.9
Q ss_pred HHHHHHHHHHHHHHHHhHHH---HHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 39 LILLGLIFSHKLVDIAVVAV---LITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 39 ~~l~~~~~~er~~~~g~~~~---l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
|.+.+..++-.+..+|+... +...+.+++ +.+.++++++.++..+..+++.++.+.+.||+ |.|.+++.|.+++.
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f-~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~~ 122 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYF-GSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVAA 122 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHh-CCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHHH
Confidence 44555555555566665544 345556678 88999999999999999999999999999995 99999999999999
Q ss_pred HhHHHHHhhhccccccchhHHHHHHHH-HHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHH
Q 009308 116 LGLVLLFITAFEEAASPLLKRLILIGV-VLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFS 194 (538)
Q Consensus 116 ~G~~ll~~~~~~~~~~~~~~~~~~~~l-~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG 194 (538)
+|.++..+++ +.+.+++.- ++.|+|.|+........++..|++ +|..+-+.--.+.-+|
T Consensus 123 ~g~~lssF~~--------~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~k------------kR~lA~Gia~~GsG~G 182 (509)
T KOG2504|consen 123 LGLLLSSFAT--------SLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEK------------KRALATGIAVSGTGVG 182 (509)
T ss_pred HHHHHHHHHh--------hHHHHHHHHHHHhhccchhhhcchhhhhhhHhHH------------HHHHHHhhhhccCCcc
Confidence 9999988886 455565554 469999999999999999988864 2222222222233344
Q ss_pred HHHHHHh-------hhhhHHHHHHHHHHHHHHH
Q 009308 195 VIASVQL-------SSWRVISTFTVSATGITLF 220 (538)
Q Consensus 195 ~~i~~~~-------~g~~~~F~i~~~~~~l~~~ 220 (538)
.++-+.+ +|||..+.+-....+-.++
T Consensus 183 ~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~ 215 (509)
T KOG2504|consen 183 TVVFPPLLKYLLSKYGWRGALLIFGGISLNVLV 215 (509)
T ss_pred eeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 4433332 8999998876555543333
No 103
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.09 E-value=2.9e-10 Score=127.12 Aligned_cols=176 Identities=16% Similarity=0.069 Sum_probs=134.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHH
Q 009308 33 CFCKAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTI 112 (538)
Q Consensus 33 ~~~~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~ 112 (538)
..++.+.+.+....+-...+.+.......-+.+.+ +++.++.|++.+.+..+..++.++.|+++||+ ||+|.+.++.+
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F-~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~-~r~~~i~~g~l 106 (633)
T TIGR00805 29 SKIKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRF-KLSTSSSGLINGSYEIGNLLLIIFVSYFGTKL-HRPIVIGIGCA 106 (633)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhh-CCCCCcceeeeehhhHHHHHHHHHHHHhhccc-CcceEEEecHH
Confidence 33454444444344444556677777778888889 99999999999999999999999999999995 99999999999
Q ss_pred HHHHhHHHHHhhhcccc-----------------------------------------cc--chhHHHHHHHHHHHHHhc
Q 009308 113 SCILGLVLLFITAFEEA-----------------------------------------AS--PLLKRLILIGVVLLAVGK 149 (538)
Q Consensus 113 ~~~~G~~ll~~~~~~~~-----------------------------------------~~--~~~~~~~~~~l~l~g~g~ 149 (538)
++.+|.++.++..+... .. +..+.+++++|+++|+|.
T Consensus 107 l~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~ 186 (633)
T TIGR00805 107 IMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGA 186 (633)
T ss_pred HHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccC
Confidence 99999999887642100 00 112557789999999999
Q ss_pred hhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-------h--------------------
Q 009308 150 AGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL-------S-------------------- 202 (538)
Q Consensus 150 g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~-------~-------------------- 202 (538)
+...+...+++.|.+|+ +++..+.++++.+.++|..+|+.+ +
T Consensus 187 ~~~~~~~~~~i~d~~~~-----------~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprW 255 (633)
T TIGR00805 187 TPIFPLGISYIDDFAKS-----------KNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRW 255 (633)
T ss_pred CcchhcCchhhhccCCc-----------cccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccH
Confidence 99999999999999876 234566788888888888888765 1
Q ss_pred --hhhHHHHHHHHHHHHHHHH
Q 009308 203 --SWRVISTFTVSATGITLFI 221 (538)
Q Consensus 203 --g~~~~F~i~~~~~~l~~~~ 221 (538)
+|+..|.+.+++.++..+.
T Consensus 256 iGaWwl~Fli~g~l~~l~~v~ 276 (633)
T TIGR00805 256 IGAWWIGFLICGGVALLTSIP 276 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 2778888776666554443
No 104
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.09 E-value=5.1e-08 Score=100.02 Aligned_cols=130 Identities=14% Similarity=0.050 Sum_probs=107.1
Q ss_pred HhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccch
Q 009308 54 AVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPL 133 (538)
Q Consensus 54 g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~ 133 (538)
.....|.+.+++.+ +.+..|++.+-..|-++..+++++.|++.+|+ |+|+.+..|+.++++|..++.-++.. .
T Consensus 30 ~l~diLip~l~~~f-~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~avg~~lF~pAa~~-----~ 102 (422)
T COG0738 30 CLNDILIPHLKEVF-DLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYAVGAALFWPAASS-----K 102 (422)
T ss_pred hcchhhHHHHHHHh-CccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHHHHHHHHhhhhhh-----h
Confidence 46778889999999 99999999999999999999999999999995 99999999999999999988755432 3
Q ss_pred hHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh
Q 009308 134 LKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL 201 (538)
Q Consensus 134 ~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~ 201 (538)
.+.++++++++.+.|.|..++..++++++..++ +...+| - |.-.-...+|+.++|.+
T Consensus 103 ~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~-----~~a~~r---l---nl~q~fn~lGa~~gp~~ 159 (422)
T COG0738 103 SYGFFLVALFILASGIGLLETAANPYVTLLGKP-----ESAAFR---L---NLAQAFNGLGAILGPLL 159 (422)
T ss_pred hHHHHHHHHHHHHhhhHHHHhccchHHHHhCCc-----hhHHHH---H---HHHHHhhhhHHHHHHHH
Confidence 578999999999999999999999999999876 222222 2 33333456677666665
No 105
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.09 E-value=3e-07 Score=96.62 Aligned_cols=165 Identities=11% Similarity=-0.056 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHH--HHHHHHH-HHHHHHhhhhhhccCCchHHHHHHHHHH-
Q 009308 39 LILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLV--NLQEGIS-ASTVIFLTCIPDAFSGRLNVIFYSTISC- 114 (538)
Q Consensus 39 ~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~--~~~~~~~-~~~~l~gG~laD~~lGr~~~i~~~~~~~- 114 (538)
..+...-+.+-+.+.-+.+.++.|+++ . |.+.++.|.+. +...... ...|+..++..|| +||||..++...+.
T Consensus 4 ~~~~~ly~~~g~~~~~~~p~lp~~l~~-~-g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~-~g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 4 ITLGLLYLSQGIPIGLAMDALPTLLRE-D-GAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWR-LGRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHH-c-CCCHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-CCcchhHHHHHHHHH
Confidence 334445566666666666777878865 8 99999999973 4444444 4455666889999 59999976555332
Q ss_pred HHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHH
Q 009308 115 ILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFS 194 (538)
Q Consensus 115 ~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG 194 (538)
.+....+... .+. .....++.....+.++..+...+...++..|..++ + ++..+.....++..+|
T Consensus 81 ~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~--------~---~~~~~~~~~~~g~~lG 145 (390)
T TIGR02718 81 SACLASLALV--GPD--VAGAGWAVGLLACASLASATQDIATDGMAAEHFNG--------R---TLAKGNAVQIAGVMIG 145 (390)
T ss_pred HHHHHHHHcC--Ccc--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH--------h---hhhHHHHHHHHHHHHH
Confidence 2112222211 110 01122333444445566666666666665555432 1 2222334445666788
Q ss_pred HHHHHHh-------hhhhHHHHHHHHHHHHHHHH
Q 009308 195 VIASVQL-------SSWRVISTFTVSATGITLFI 221 (538)
Q Consensus 195 ~~i~~~~-------~g~~~~F~i~~~~~~l~~~~ 221 (538)
.++|... .||+..|.+.++..++..+.
T Consensus 146 ~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~ 179 (390)
T TIGR02718 146 FFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVC 179 (390)
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 8888642 79999999887776655444
No 106
>PRK11462 putative transporter; Provisional
Probab=99.06 E-value=1.3e-07 Score=101.96 Aligned_cols=145 Identities=10% Similarity=0.017 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhc---cCCchHHH-HHHHHHHHHhHH
Q 009308 44 LIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDA---FSGRLNVI-FYSTISCILGLV 119 (538)
Q Consensus 44 ~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~---~lGr~~~i-~~~~~~~~~G~~ 119 (538)
.++...+.+..+...+..|.++.+ |.+...+|.+..+-...-.+.-++.|+++|| .+||||-. +++.+...++.+
T Consensus 17 g~~~~~~~~~~~~~~l~~fyt~~~-Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ 95 (460)
T PRK11462 17 GDAASHIIFDNVMLYMMFFYTDIF-GIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCV 95 (460)
T ss_pred chhhhhHHHHHHHHHHHHHHHHhh-CCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHH
Confidence 445555566666677889999999 9999999999999999999999999999997 46997655 456678888776
Q ss_pred HHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHH
Q 009308 120 LLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASV 199 (538)
Q Consensus 120 ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~ 199 (538)
++.... ..+.......+++.-.+..++..+......++.++..++ ++||.+ ..++...+.++|.++++
T Consensus 96 llf~~p--~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d-------~~eRt~---l~s~r~~~~~iG~~~~~ 163 (460)
T PRK11462 96 LAYSTP--DLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITND-------PTQRIS---LQSWRFVLATAGGMLST 163 (460)
T ss_pred HHHhCC--CCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCC-------HHHHHH---HHHHHHHHHHHHHHHHH
Confidence 655332 111122344555566667888888889999999999754 566654 44555667777776664
Q ss_pred Hh
Q 009308 200 QL 201 (538)
Q Consensus 200 ~~ 201 (538)
.+
T Consensus 164 ~~ 165 (460)
T PRK11462 164 VL 165 (460)
T ss_pred HH
Confidence 43
No 107
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.97 E-value=1.4e-08 Score=105.43 Aligned_cols=160 Identities=9% Similarity=0.031 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHH
Q 009308 42 LGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLL 121 (538)
Q Consensus 42 ~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll 121 (538)
....++...++......++.|+++++ |.+..+++.+.....+....+.+++|++.||+ |||+.+.++.++..++..++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~ 282 (375)
T TIGR00899 205 FVACTLMWGCNILYIINMPLLIIHEL-GLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-GKRRLMLLAALAGVAFYTGL 282 (375)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cchhHHHHHHHHHHHHHHHH
Confidence 33334444444455566788888889 99999999988877777788889999999995 99999988877766655444
Q ss_pred HhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh
Q 009308 122 FITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL 201 (538)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~ 201 (538)
.... +.+.+++.+.+.+++.|...+...++..|..|+ ++++..+.++...++|..+++.+
T Consensus 283 ~~~~--------~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~g~~~g~~~ 342 (375)
T TIGR00899 283 AADN--------SLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG------------RAGAATTLYTNTGRVGWIIAGSV 342 (375)
T ss_pred HHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc------------hhhHHHHHHHHHHHHHHHHHHHH
Confidence 4332 345566778888999888888888888887653 22366677777888888888765
Q ss_pred -------hhhhHHHHHHHHHHHHHHHHHH
Q 009308 202 -------SSWRVISTFTVSATGITLFIFR 223 (538)
Q Consensus 202 -------~g~~~~F~i~~~~~~l~~~~~~ 223 (538)
.||+..|.+.++..+++.+...
T Consensus 343 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 343 GGILAERWSYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred HHHHHHhccchhHHHHHHHHHHHHHHHHh
Confidence 5888889888777776666543
No 108
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.97 E-value=2.2e-08 Score=105.62 Aligned_cols=156 Identities=9% Similarity=0.040 Sum_probs=110.2
Q ss_pred HHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhh
Q 009308 46 FSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITA 125 (538)
Q Consensus 46 ~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~ 125 (538)
+.-...++.....++.|+++.+ |+++.+++.+.+...+...++.+++|+++||+ |||+.+..+.....+....+....
T Consensus 226 ~~~~~~~~~~~~~~p~~l~~~~-~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~ 303 (393)
T PRK15011 226 TLMWGTNSLYIINMPLFIINEL-HLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-GKRFLMRVAAVAGVCFYAGMLMAH 303 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333445555567888998889 99999999988887788888899999999995 999988877666555543333222
Q ss_pred ccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh----
Q 009308 126 FEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL---- 201 (538)
Q Consensus 126 ~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~---- 201 (538)
+...+.+.+++.+++.|...+...++..|..|+ +++...+.+....++|..+++.+
T Consensus 304 --------~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~------------~~g~~~~~~~~~~~lg~~~g~~l~G~i 363 (393)
T PRK15011 304 --------SPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG------------QAGSATTLYTNTSRVGWIIAGSLAGIV 363 (393)
T ss_pred --------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC------------CcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 244556677777777777766677777777654 23344555555667777777665
Q ss_pred ---hhhhHHHHHHHHHHHHHHHHHH
Q 009308 202 ---SSWRVISTFTVSATGITLFIFR 223 (538)
Q Consensus 202 ---~g~~~~F~i~~~~~~l~~~~~~ 223 (538)
.||+..|.+..+..+++++..+
T Consensus 364 ~~~~g~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK15011 364 AEIWNYHAVFWFALVMIIATLFCLL 388 (393)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 5898888887777766665444
No 109
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.95 E-value=1.3e-08 Score=105.01 Aligned_cols=163 Identities=13% Similarity=0.098 Sum_probs=122.7
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHH
Q 009308 37 AALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCIL 116 (538)
Q Consensus 37 ~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~ 116 (538)
..+.+....++..+.+......++.|.+ ++ +.+..+++.+...+.....++.+++|+++||+ |||+++.++.++..+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~ 282 (377)
T TIGR00890 206 QFWVLYLSFFLNAVSGLLLIGLYKPYGQ-SL-GLSDGFLVLAVSISSIFNGGGRPFLGALSDKI-GRQKTMSIVFGISAV 282 (377)
T ss_pred cHHHHHHHHHHHhHHHHHHHHHHHHHHH-Hc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHH
Confidence 4455555555555565556666667764 58 88999999999999999999999999999995 999999999999888
Q ss_pred hHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHH
Q 009308 117 GLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVI 196 (538)
Q Consensus 117 G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~ 196 (538)
+.+++..... .....+++..++.+++.|...+..+++..|.+|+ +++.+.++.++...++|..
T Consensus 283 ~~~~~~~~~~------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-----------~~~~~~~g~~~~~~~~g~~ 345 (377)
T TIGR00890 283 GMAAMLFIPM------LNDVLFLATVALVFFTWGGTISLFPSLVSDIFGP-----------ANSAANYGFLYTAKAVAGI 345 (377)
T ss_pred HHHHHHHccc------chhHHHHHHHHHHHHHhccchhccHHHHHHHhhh-----------hhhhhHhHHHHHHHHHHHH
Confidence 8876655431 1123345567778888888888888999999876 2345667777888889988
Q ss_pred HHHHh-------hhhhHHHHHHHHHHHHHH
Q 009308 197 ASVQL-------SSWRVISTFTVSATGITL 219 (538)
Q Consensus 197 i~~~~-------~g~~~~F~i~~~~~~l~~ 219 (538)
+++.+ .||+..|.+.+++.++++
T Consensus 346 ~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 346 FGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 88775 688888887776665543
No 110
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.95 E-value=5.1e-07 Score=98.90 Aligned_cols=142 Identities=18% Similarity=0.233 Sum_probs=104.2
Q ss_pred HHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHH
Q 009308 57 AVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKR 136 (538)
Q Consensus 57 ~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~ 136 (538)
+....++.+++ |-+ ...+|+...+......+.++.|.|+|.+ |||+.++.+.++.++|.++.+.+. +..
T Consensus 64 a~~l~~I~~di-G~~-~~~~w~~~~~~l~~av~~~~~G~LSDlf-GRr~~~i~g~~l~vvG~Iv~atA~--------~~~ 132 (599)
T PF06609_consen 64 ASILPYINADI-GGS-DNWSWFSTAWTLASAVSFPFVGRLSDLF-GRRYFFIIGSLLGVVGSIVCATAQ--------NMN 132 (599)
T ss_pred HHHHHHHHHhc-CCC-ccchHHHHHHHHHHHHHHHhhHHHHHHh-cchHHHHHHHHHHHhHHHHhhcCC--------cHH
Confidence 44556888889 764 7788899999999999999999999995 999999999999999998877664 577
Q ss_pred HHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHH----HHHHHHHHh---hhhhHHHH
Q 009308 137 LILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFF----FSVIASVQL---SSWRVIST 209 (538)
Q Consensus 137 ~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~n----iG~~i~~~~---~g~~~~F~ 209 (538)
.+..+..+.|+|.|.... ....++|..|. +.| ...+....+..- +|..++..+ .+|||.|+
T Consensus 133 ~~iag~~l~GvgaG~~~~-~~~~isEl~p~--------k~R---~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~ 200 (599)
T PF06609_consen 133 TFIAGMVLYGVGAGVQEL-AALAISELVPN--------KWR---GLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFY 200 (599)
T ss_pred HHHHHHHHHHHhhHHHHH-HHHHHHHhccc--------chh---hhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHH
Confidence 899999999999887764 45668999875 222 111111111111 233333333 58999999
Q ss_pred HHHHHHHHHHHH
Q 009308 210 FTVSATGITLFI 221 (538)
Q Consensus 210 i~~~~~~l~~~~ 221 (538)
+..+...++++.
T Consensus 201 ~~~i~~~i~~vl 212 (599)
T PF06609_consen 201 IFIIWSGIALVL 212 (599)
T ss_pred HHHHHHHHHHHH
Confidence 988776665543
No 111
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.93 E-value=2.2e-08 Score=102.03 Aligned_cols=166 Identities=15% Similarity=0.141 Sum_probs=140.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchH-HHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLN-VIFYSTISC 114 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~-~i~~~~~~~ 114 (538)
+..+.+....++...++......++.|+.+.+ |.+..+.+.+.........++.++.|++.||+ |||+ .+..+..+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~ 252 (352)
T cd06174 175 RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVL-GLSAAEAGLLLSLFGLGGILGALLGGLLSDRL-GRRRLLLLIGLLLA 252 (352)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHH
Confidence 55666777788888888888899999999888 89999999999999999999999999999995 9999 999999999
Q ss_pred HHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHH
Q 009308 115 ILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFS 194 (538)
Q Consensus 115 ~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG 194 (538)
.++.+++.... +....++..++.+++.+...+...++..|..|+ +++.+.++.+....++|
T Consensus 253 ~i~~~~~~~~~--------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~ 313 (352)
T cd06174 253 ALGLLLLALAP--------SLALLLVALLLLGFGLGFAFPALLTLASELAPP-----------EARGTASGLFNTFGSLG 313 (352)
T ss_pred HHHHHHHHHhc--------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCH-----------HHHHHHHHHHHHHHHHH
Confidence 99888777654 356778889999999999999999999999875 24456677778888999
Q ss_pred HHHHHHh-------hhhhHHHHHHHHHHHHHHHHH
Q 009308 195 VIASVQL-------SSWRVISTFTVSATGITLFIF 222 (538)
Q Consensus 195 ~~i~~~~-------~g~~~~F~i~~~~~~l~~~~~ 222 (538)
..+++.+ .+|+..|.+.++..+++.+..
T Consensus 314 ~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 314 GALGPLLAGLLLDTGGYGGVFLILAALALLAALLL 348 (352)
T ss_pred HHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHh
Confidence 8888776 588888888877777666544
No 112
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.93 E-value=2.1e-12 Score=138.21 Aligned_cols=145 Identities=14% Similarity=0.214 Sum_probs=111.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchh
Q 009308 72 VVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAG 151 (538)
Q Consensus 72 ~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~ 151 (538)
..+.+++.+.+..+..++.+++|+++||+ |||+++.++.+++.+|.++..++... .+...+.++|++.|+|.|+
T Consensus 45 ~~~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~R~~~G~~~g~ 118 (451)
T PF00083_consen 45 SLLSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILIAFAPSY-----NNFWMLLIGRFLIGFGIGG 118 (451)
T ss_pred HHHHHHHHHHHHhhhcccccccccccccc-cccccccccccccccccccccccccc-----ccccccccccccccccccc
Confidence 34578889999999999999999999995 99999999999999999888877521 1367899999999999999
Q ss_pred hcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-------h---hhhHHHHHHHHHHHHHHH-
Q 009308 152 MQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL-------S---SWRVISTFTVSATGITLF- 220 (538)
Q Consensus 152 ~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~-------~---g~~~~F~i~~~~~~l~~~- 220 (538)
..+..+.++.|..|+ +.| .....++..+.++|.+++..+ . +||..+.++.+..++.++
T Consensus 119 ~~~~~~~~~~E~~~~--------~~R---~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~ 187 (451)
T PF00083_consen 119 AYVVSPIYISEIAPP--------KHR---GFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLL 187 (451)
T ss_pred ccccccccccccccc--------ccc---ccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999876 333 344455556677887777654 2 499888776655533222
Q ss_pred -HHHhcccceeecc
Q 009308 221 -IFRLGIRFFHSTE 233 (538)
Q Consensus 221 -~~~~~~~~~~~~~ 233 (538)
.++.++|+|...+
T Consensus 188 ~~~~pESP~wL~~~ 201 (451)
T PF00083_consen 188 RFFLPESPRWLLSK 201 (451)
T ss_pred ccccccccceeccc
Confidence 3555778776543
No 113
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.90 E-value=8.9e-07 Score=89.80 Aligned_cols=153 Identities=14% Similarity=0.125 Sum_probs=128.6
Q ss_pred HHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccc
Q 009308 49 KLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEE 128 (538)
Q Consensus 49 r~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~ 128 (538)
|-..- -.+++..-+++++ |.|.+.+|.+.++-....-+..+++.+++.|+ |-.|++..+.++..+|.++=...
T Consensus 25 R~~it-svgPLL~~Ir~~~-gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~-g~er~l~~~Llli~~G~~iR~~~---- 97 (395)
T COG2807 25 RPAIT-SVGPLLDEIRQDL-GLSFSVAGLLTTLPLLAFGLFAPAAPRLARRF-GEERSLFLALLLIAAGILIRSLG---- 97 (395)
T ss_pred chhhh-hhhhhHHHHHHHh-cccHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hhHHHHHHHHHHHHHHHHHHhcc----
Confidence 44443 3345556777889 99999999999999999999999999999995 99999999999999998765443
Q ss_pred cccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-------
Q 009308 129 AASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL------- 201 (538)
Q Consensus 129 ~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~------- 201 (538)
+...++.+-.+.|+|.+......|+.+-+-||+ +.....+.|..+.++|+.++..+
T Consensus 98 -----~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk------------~~~~mtglYs~sl~~~aaLaa~lavpla~~ 160 (395)
T COG2807 98 -----GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPK------------RVGLMTGLYSTSLGAGAALAAALAVPLAQH 160 (395)
T ss_pred -----cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhccc------------chhhHHhHHHHHHHHHHHHHhhhhhHHHHh
Confidence 356889999999999999999999999998876 34566688889999999988765
Q ss_pred -hhhhHHHHHHHHHHHHHHHHHHhc
Q 009308 202 -SSWRVISTFTVSATGITLFIFRLG 225 (538)
Q Consensus 202 -~g~~~~F~i~~~~~~l~~~~~~~~ 225 (538)
.||+....+-++..++++++++..
T Consensus 161 ~~gW~~aL~~WAl~allAl~~WlPq 185 (395)
T COG2807 161 SGGWRGALGFWALLALLALLIWLPQ 185 (395)
T ss_pred hccHHHHHHHHHHHHHHHHHHHhhh
Confidence 479999988888888888888764
No 114
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.90 E-value=4.8e-08 Score=101.49 Aligned_cols=159 Identities=19% Similarity=0.129 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
+.++.+....++..+.++.+...++.|+++.+ |.+..+++.+.........++.+++|+++||+ |||+.+..+..+..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~ 296 (394)
T TIGR00883 219 KPFLLGLGLVIATTTTFYLITTYLPTYLTQTL-GLSANSALLVLMLSLILFFITIPLSGALSDRI-GRRPVLIIFTVLAA 296 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHH
Confidence 34666777788888889888899999998889 99999999999999999999999999999995 99998876655544
Q ss_pred HhH-HHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehh-hHHHHHH
Q 009308 116 LGL-VLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVW-WLIPFFF 193 (538)
Q Consensus 116 ~G~-~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~-~y~~~ni 193 (538)
+.. .++...... .+...+.+..++.+++.+...+...+++.|.+|+ ++ +.+.++. +.++..+
T Consensus 297 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~--------~~---~~~~~~~~~~~~~~~ 360 (394)
T TIGR00883 297 LLAVPLLMALLDS-----GSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPT--------EV---RYTGASLAYNLAGAI 360 (394)
T ss_pred HHHHHHHHHHhcC-----CchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCc--------cc---eeeEeeehhHhHHHH
Confidence 332 222211100 1344566777888999999999999999999876 22 3344444 2344556
Q ss_pred HHHHHHHh-------hh-hhHHHHHHH
Q 009308 194 SVIASVQL-------SS-WRVISTFTV 212 (538)
Q Consensus 194 G~~i~~~~-------~g-~~~~F~i~~ 212 (538)
|..+++.+ .| |+..+....
T Consensus 361 g~~~~p~~~g~l~~~~g~~~~~~~~~~ 387 (394)
T TIGR00883 361 FGGFAPYIAAALVAMTGDWYAIGYYLA 387 (394)
T ss_pred HhhHHHHHHHHHHHHcCcchhHHHHHH
Confidence 77677665 34 655554433
No 115
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.90 E-value=4.3e-08 Score=103.20 Aligned_cols=154 Identities=18% Similarity=0.139 Sum_probs=114.8
Q ss_pred HHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhc
Q 009308 47 SHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAF 126 (538)
Q Consensus 47 ~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~ 126 (538)
+..+++.++...++.|+.+ . |. .+++.....+..+..++.++.|++.||+ ||+|.+..+..+..++.+++....
T Consensus 227 ~~~~~~~~~~~~~~~~~~~-~-~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~- 300 (399)
T PRK05122 227 LASIGFGTIATFITLYYAA-R-GW--DGAALALTLFGVAFVGARLLFGNLINRL-GGLRVAIVSLLVEILGLLLLWLAP- 300 (399)
T ss_pred HHHHHHHHHHHHHHHHHHH-c-cc--ccchHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhc-
Confidence 3455666677777888764 5 55 3456666777888888999999999995 999999999888888877766543
Q ss_pred cccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-----
Q 009308 127 EEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL----- 201 (538)
Q Consensus 127 ~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~----- 201 (538)
+...+++++++.|+|.+...|.......|..|+ +++.+.++.++...++|..+++.+
T Consensus 301 -------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~-----------~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 362 (399)
T PRK05122 301 -------SPWMALIGAALTGFGFSLVFPALGVEAVKRVPP-----------QNRGAALGAYSVFLDLSLGITGPLAGLVA 362 (399)
T ss_pred -------cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345567788899999998888888888887654 234566777777888887776554
Q ss_pred --hhhhHHHHHHHHHHHHHHHHHHh
Q 009308 202 --SSWRVISTFTVSATGITLFIFRL 224 (538)
Q Consensus 202 --~g~~~~F~i~~~~~~l~~~~~~~ 224 (538)
.||+..|.+.+++.+++++....
T Consensus 363 ~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (399)
T PRK05122 363 SWFGYPSIFLAAALAALLGLALTWL 387 (399)
T ss_pred HHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 58999998877777666655443
No 116
>PRK03699 putative transporter; Provisional
Probab=98.89 E-value=3.3e-08 Score=104.16 Aligned_cols=163 Identities=9% Similarity=0.005 Sum_probs=121.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
+.++.+...-++.-++++++...++.|+++.+ |++..+++.+.+.+.....++.+++|+++||+ |||+.+..+..+..
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~-g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~l~~~~~~~~ 282 (394)
T PRK03699 205 IGVLFLAIAALLYILAQLTFISWVPEYAQKKF-GMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-DLQRILTVLAGLAL 282 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHH
Confidence 45566666667777788888899999999889 99999999999999999999999999999995 99999888777766
Q ss_pred HhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHH
Q 009308 116 LGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSV 195 (538)
Q Consensus 116 ~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~ 195 (538)
++..++.... +.....+..++.|++.+...+...++..++.++ . + ....++.+.+.++|.
T Consensus 283 ~~~~~~~~~~--------~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~-----~----~---~~~~g~~~~~~~~g~ 342 (394)
T PRK03699 283 VLMYLFVNTD--------DPSHLLYAILGLGFFSSAIYTTIITLGSQQTKV-----A----S---PKLVNFILTCGTIGT 342 (394)
T ss_pred HHHHHHHHcC--------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-----C----C---HHHHHHHHHhhhHHH
Confidence 6555544332 233455566778888888888888888887654 1 1 122355566778888
Q ss_pred HHHHHh-------hhhhHHHHHHHHHHHHHHH
Q 009308 196 IASVQL-------SSWRVISTFTVSATGITLF 220 (538)
Q Consensus 196 ~i~~~~-------~g~~~~F~i~~~~~~l~~~ 220 (538)
.+++.+ .|++..|++.++..+++.+
T Consensus 343 ~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~ 374 (394)
T PRK03699 343 MLTFVVTSPIVAHFGLQAALLTANGLYAVVFV 374 (394)
T ss_pred HHHHHHHHHHHHHhCchhhhhhhHHHHHHHHH
Confidence 888775 5788888766555555443
No 117
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=98.88 E-value=6.4e-08 Score=105.22 Aligned_cols=118 Identities=14% Similarity=0.201 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHH
Q 009308 41 LLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVL 120 (538)
Q Consensus 41 l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~l 120 (538)
.+...++..+++|++...++.|+++.+ |++..+++...........++.+++|+++||+ |||+++.++.++..++.+.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~p~~l~~~~-g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~~~~~~~~ 332 (490)
T PRK10642 255 CIGLVIATNVTYYMLLTYMPSYLSHNL-HYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF-GRRPFVILGSVALFVLAIP 332 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHH
Confidence 334445566889999999999998889 99988888888888888889999999999995 9999998887755543332
Q ss_pred -HHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccc
Q 009308 121 -LFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRA 166 (538)
Q Consensus 121 -l~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~ 166 (538)
+..... .+...+++++++.+++.++......++..+.+|+
T Consensus 333 ~~~~~~~------~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~ 373 (490)
T PRK10642 333 AFILINS------NVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPT 373 (490)
T ss_pred HHHHHhC------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 222111 1355677888888888777777778888888876
No 118
>PTZ00207 hypothetical protein; Provisional
Probab=98.84 E-value=5.7e-08 Score=106.73 Aligned_cols=142 Identities=10% Similarity=-0.052 Sum_probs=107.6
Q ss_pred HHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHHH
Q 009308 58 VLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKRL 137 (538)
Q Consensus 58 ~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~ 137 (538)
.....+.+++ |+++++.+.+.+...... .+.+++|+++||+ |||+++.++.+++.+|+++..++.... ...+.+.
T Consensus 48 v~s~~L~~~l-gls~~~l~~i~svg~~~g-~~~lp~G~L~Dr~-G~R~vllig~ll~~iG~ll~ala~~~~--i~~s~~~ 122 (591)
T PTZ00207 48 LISGAMQARY-NLTQRDLSTITTVGIAVG-YFLLPYSFIYDYL-GPRPIFVLSMTVFCLGTLLFALTFQEV--IEGSVVR 122 (591)
T ss_pred HHHHHHHHHh-CcCHHHHHHHHHHHHHHH-HHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHhccc--ccCcHHH
Confidence 4455677889 999999999887754443 4566789999995 999999999999999999988762100 0014778
Q ss_pred HHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh------hhhhHHHHHH
Q 009308 138 ILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL------SSWRVISTFT 211 (538)
Q Consensus 138 ~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~------~g~~~~F~i~ 211 (538)
+++.|++.|+|.+.+.+.....+.+.+|+ +|+...++...+.++|+.+...+ .+|+..|++.
T Consensus 123 l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~------------~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl~l 190 (591)
T PTZ00207 123 LSVYNGLMTLGCMLFDLGAVVTVLSVFPS------------NRGAVVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFFFL 190 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhChh------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 89999999999999999889999999864 34567788888899999764332 3677666655
Q ss_pred HHHHH
Q 009308 212 VSATG 216 (538)
Q Consensus 212 ~~~~~ 216 (538)
++..+
T Consensus 191 ~vl~~ 195 (591)
T PTZ00207 191 MSFAL 195 (591)
T ss_pred HHHHH
Confidence 44444
No 119
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.84 E-value=4.8e-07 Score=97.67 Aligned_cols=135 Identities=13% Similarity=-0.073 Sum_probs=98.3
Q ss_pred ccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHHHHHHHHHH
Q 009308 65 DYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKRLILIGVVL 144 (538)
Q Consensus 65 ~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l 144 (538)
+++ ++...+-+.+.++|..+..++.+++|+|.||+ .-.+.+....+...+-.++-... .+.+.+.+.|++
T Consensus 74 edl-~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~w~~~~~~~~~~--------~s~~~~ialr~l 143 (495)
T KOG2533|consen 74 EDL-KLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGILWGLFGFLTAAV--------HSFPGLIALRFL 143 (495)
T ss_pred ccc-chhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHH--------hhhHHHHHHHHH
Confidence 456 78889999999999999999999999999995 74444433333332211111111 257789999999
Q ss_pred HHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-------------hhhhHHHHHH
Q 009308 145 LAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL-------------SSWRVISTFT 211 (538)
Q Consensus 145 ~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~-------------~g~~~~F~i~ 211 (538)
.|+.++..-|+...+++..|.+ +|+..|. ++|+-+.++|..+|.++ .||++.|.+.
T Consensus 144 lGl~es~~wP~~~~~lg~wy~~--------~e~g~r~---~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~ 212 (495)
T KOG2533|consen 144 LGLFESGGWPGVVAILGNWYGK--------SERGLRM---GIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIE 212 (495)
T ss_pred HHHHhcccchHHHHHHHhhcCh--------hhhhhhH---HHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHH
Confidence 9999999999999999999976 4554444 56675566666555443 6999999998
Q ss_pred HHHHHHHHH
Q 009308 212 VSATGITLF 220 (538)
Q Consensus 212 ~~~~~l~~~ 220 (538)
+++.+...+
T Consensus 213 G~i~~~~gi 221 (495)
T KOG2533|consen 213 GVITLVLGI 221 (495)
T ss_pred HHHHHHHHh
Confidence 877764443
No 120
>PRK09952 shikimate transporter; Provisional
Probab=98.83 E-value=1.3e-07 Score=101.23 Aligned_cols=173 Identities=15% Similarity=0.153 Sum_probs=114.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHH
Q 009308 34 FCKAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTIS 113 (538)
Q Consensus 34 ~~~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~ 113 (538)
.++....+....++.-+++|+....++.|+++.+ |++......+.........++.++.|+++||+ ||||++..+.++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~-g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~-grr~~~~~~~~~ 325 (438)
T PRK09952 248 HPGAFLKIIALRLCELLTMYIVTAFALNYSTQNL-GLPRELFLNIGLLVGGLSCLTIPCFAWLADRF-GRRRVYITGALI 325 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHH
Confidence 3344444455677788889999899999999889 99888766666666677788889999999995 999999888776
Q ss_pred HHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhH-HHHH
Q 009308 114 CILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWL-IPFF 192 (538)
Q Consensus 114 ~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y-~~~n 192 (538)
..++.+.+....... .....+.+..++.+++.+...+...++.+|.+|. + .+....++-| ++..
T Consensus 326 ~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~--------~---~r~tg~g~~~~~~~~ 390 (438)
T PRK09952 326 GTLSAFPFFMALEAQ----SIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGA--------S---YRYSGAGVGYQVASV 390 (438)
T ss_pred HHHHHHHHHHHHHcC----ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCc--------c---hhHHHHhHHHHHHHH
Confidence 665543333221000 1233444556677888888888899999999976 1 2333333322 3344
Q ss_pred HHHHHHHHh-------h--hhhHHHHHHHHHHHHHHHHHH
Q 009308 193 FSVIASVQL-------S--SWRVISTFTVSATGITLFIFR 223 (538)
Q Consensus 193 iG~~i~~~~-------~--g~~~~F~i~~~~~~l~~~~~~ 223 (538)
+|+.+++.+ . +|...|...+++.+++.+..+
T Consensus 391 lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~ 430 (438)
T PRK09952 391 VGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTAL 430 (438)
T ss_pred HHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHH
Confidence 666666654 1 366667666555555555433
No 121
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.82 E-value=1.3e-07 Score=99.47 Aligned_cols=158 Identities=9% Similarity=0.049 Sum_probs=114.3
Q ss_pred HHHHHHHHHHhHHHHHHHhcccCCCCChH---HHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHH
Q 009308 45 IFSHKLVDIAVVAVLITYLTDYPRNYNVV---EAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLL 121 (538)
Q Consensus 45 ~~~er~~~~g~~~~l~~yl~~~l~g~s~~---~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll 121 (538)
.++..++...+.+.+..|+.+.. +.... ..+.+...+.....++.++.|+++||+ |||+++..+..+..++.+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~ 305 (408)
T PRK09874 228 TLIIQVATGSIAPILTLYVRELA-GNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRI-GPEKILITALIFSVLLLIPM 305 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhHHHHHHHHHHHHHHH
Confidence 34444555556677777887633 32221 244555666677778888999999995 99999999988887777665
Q ss_pred HhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh
Q 009308 122 FITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL 201 (538)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~ 201 (538)
.... +.+.+++.+++.|++.|...|...++..+..++ +.+.+.++.++...++|..+|+.+
T Consensus 306 ~~~~--------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----------~~~g~~~~~~~~~~~~g~~~gp~~ 366 (408)
T PRK09874 306 SFVQ--------TPLQLGILRFLLGAADGALLPAVQTLLVYNSSN-----------QIAGRIFSYNQSFRDIGNVTGPLM 366 (408)
T ss_pred HHhc--------cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCc-----------ccceeeehHHHHHHHHHHHhhHHH
Confidence 5443 345677888899999999999988888777654 245677777777888888888776
Q ss_pred -------hhhhHHHHHHHHHHHHHHHHHH
Q 009308 202 -------SSWRVISTFTVSATGITLFIFR 223 (538)
Q Consensus 202 -------~g~~~~F~i~~~~~~l~~~~~~ 223 (538)
.||+..|.+.+++.+++.+...
T Consensus 367 ~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 395 (408)
T PRK09874 367 GAAISANYGFRAVFLVTAGVVLFNAVYSW 395 (408)
T ss_pred HHHHHhhcchhHHHHHHHHHHHHHHHHHH
Confidence 5899999988877776666544
No 122
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.80 E-value=2e-08 Score=88.12 Aligned_cols=122 Identities=13% Similarity=0.085 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhh
Q 009308 81 LQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFL 160 (538)
Q Consensus 81 ~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ 160 (538)
.+.....++.++.|+++||+ |||+++..+..+..++.+++.... +.+.+.+.+++.|++.+...+...++.
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~g~~~~~~~~~~~~~~ 76 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRF-GRKPVLLVGLFIFVLSTAMFALSS--------NITVLIIARFLQGFGAAFALVAGAALI 76 (141)
T ss_pred eehhHHHHHHhhHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHhc--------cHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 45566788899999999995 999999999999888887766543 466778889999999999999999999
Q ss_pred hccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-------hhhhHHHHHHHHHHHHHHHHH
Q 009308 161 ADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL-------SSWRVISTFTVSATGITLFIF 222 (538)
Q Consensus 161 ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~-------~g~~~~F~i~~~~~~l~~~~~ 222 (538)
.|.+|+ + ++....+......++|..+++.+ .+|+..|.+..+..+++.+..
T Consensus 77 ~~~~~~--------~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (141)
T TIGR00880 77 ADIYPP--------E---ERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILL 134 (141)
T ss_pred HHHCCh--------h---hhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHH
Confidence 999876 1 34455677777888888888765 578888887766655554443
No 123
>PRK03545 putative arabinose transporter; Provisional
Probab=98.79 E-value=1.9e-07 Score=98.24 Aligned_cols=165 Identities=10% Similarity=0.006 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHh
Q 009308 38 ALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILG 117 (538)
Q Consensus 38 ~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G 117 (538)
++.++...++....+++....+++|+++.. |++..+++.+...+.....++.++.|+++||+ |||+. ..+..+..++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~-~~~~~~~~~~ 283 (390)
T PRK03545 207 LVSLYLLTVVVVTAHFTAYSYIEPFVQQVA-GLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-PSGFL-LIAIALLLVC 283 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHH-HHHHHHHHHH
Confidence 344444555556666767777888888888 99999999999999999999999999999995 88764 4455554444
Q ss_pred HHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHH
Q 009308 118 LVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIA 197 (538)
Q Consensus 118 ~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i 197 (538)
..++.... .+.+.+++..++.|++.+...+...+.+.+..|+ + ++++.+++....++|..+
T Consensus 284 ~~~l~~~~-------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~---------~---~~~~~g~~~~~~~~g~~~ 344 (390)
T PRK03545 284 LLLLLPAA-------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAPD---------A---TDVAMALFSGIFNIGIGA 344 (390)
T ss_pred HHHHHHHh-------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCCC---------c---HHHHHHHHHHHHHHHHHH
Confidence 43332222 1345666777888888887777777777776443 2 234444444445555555
Q ss_pred HHHh-------hhhhHHHHHHHHHHHHHHHHHHh
Q 009308 198 SVQL-------SSWRVISTFTVSATGITLFIFRL 224 (538)
Q Consensus 198 ~~~~-------~g~~~~F~i~~~~~~l~~~~~~~ 224 (538)
|+.+ .|++..|.+.++..+++++....
T Consensus 345 G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 378 (390)
T PRK03545 345 GALLGNQVSLHLGLSSIGYVGAALALAALVWSIL 378 (390)
T ss_pred HHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHH
Confidence 5443 78899998888777777776554
No 124
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.79 E-value=1.3e-07 Score=106.98 Aligned_cols=123 Identities=11% Similarity=-0.003 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchh
Q 009308 79 VNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGP 158 (538)
Q Consensus 79 ~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~ 158 (538)
..+..++..++.+++|+++|| +|||+++.++.++.+++.+++.+.. +...+++.+++.+++.++..+...+
T Consensus 601 ~~l~~l~~i~G~il~g~L~Dr-~GRr~~l~~~~~lsai~~ll~~~~~--------s~~~ll~~~~l~g~~~~~~~~~~~a 671 (742)
T TIGR01299 601 NFLGTLAVLPGNIVSALLMDK-IGRLRMLAGSMVLSCISCFFLSFGN--------SESAMIALLCLFGGLSIAAWNALDV 671 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHHHHHc--------cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345567778899999999999 5999999999999888877766653 2345566677778887888888999
Q ss_pred hhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh------hhhhHHHHHHHHHHHHHHHH
Q 009308 159 FLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL------SSWRVISTFTVSATGITLFI 221 (538)
Q Consensus 159 ~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~------~g~~~~F~i~~~~~~l~~~~ 221 (538)
+++|.+|. ..|...+++.+...++|+++|+.+ .+....|.+++++.+++.++
T Consensus 672 ~~aEl~Pt-----------~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~~lll~~ll 729 (742)
T TIGR01299 672 LTVELYPS-----------DKRATAFGFLNALCKAAAVLGILIFGSFVGITKAAPILFASAALACGGLL 729 (742)
T ss_pred HHHHHcCH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 99999987 245678889999999999999876 33445666666666555443
No 125
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.77 E-value=2.1e-07 Score=98.81 Aligned_cols=145 Identities=12% Similarity=-0.011 Sum_probs=111.6
Q ss_pred HHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhcccccc
Q 009308 52 DIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAAS 131 (538)
Q Consensus 52 ~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~ 131 (538)
+.++...++.|+++.+ |.+..+++.+.+.+..+..++.+++|+++||. ++++++..+.++..++.+++....
T Consensus 239 ~~~~~~~~p~~~~~~~-g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~~------ 310 (417)
T PRK10489 239 ASAVRVLYPALADEVW-QMGAAQIGLLYAAVPLGAALGALTSGWLAHSA-RPGLLMLLSTLGSFLAVGLFGLMP------ 310 (417)
T ss_pred HHhHHHhhHHHHHhcc-CCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-CcchHHHHHHHHHHHHHHHHHccc------
Confidence 4466667788988889 99999999999999999999999999999994 888888888888888876665443
Q ss_pred chhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-------hhh
Q 009308 132 PLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL-------SSW 204 (538)
Q Consensus 132 ~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~-------~g~ 204 (538)
+.....++.++.|++.+...+...+++.|..|+ +.+.+.+++++...++|..+|+.+ .|+
T Consensus 311 --~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~-----------~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~ 377 (417)
T PRK10489 311 --MWILAVLCLALFGYLSAISSLLQYTLLQTQTPD-----------EMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTP 377 (417)
T ss_pred --hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCH-----------HHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhch
Confidence 345667778888999888888888899998875 234566777777777888887776 466
Q ss_pred hHHHHHHHHHHHH
Q 009308 205 RVISTFTVSATGI 217 (538)
Q Consensus 205 ~~~F~i~~~~~~l 217 (538)
+..|.+.+++.++
T Consensus 378 ~~~~~~~~~~~~~ 390 (417)
T PRK10489 378 VASASASGFGLLI 390 (417)
T ss_pred hhHHHHHHHHHHH
Confidence 6666655544443
No 126
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.76 E-value=2.1e-07 Score=100.56 Aligned_cols=169 Identities=9% Similarity=-0.056 Sum_probs=114.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
+.+|.+....++-...+++....++.|+++.+ |++..+++.....+..+..++.+++|+++||+ |||+.+..+..+..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~-g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-g~r~~~~~~~~~~~ 335 (467)
T PRK09556 258 PVIWLLCFANIFLYIVRIGIDNWSPVYAFQEL-GFSKEDAINTFTLFEIGALVGSLLWGWLSDLA-NGRRALVACIALAL 335 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCchHHHHHHHHH
Confidence 45788888888888888888888999999889 99999999999999999999999999999995 99888776655544
Q ss_pred HhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHH-H
Q 009308 116 LGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFF-S 194 (538)
Q Consensus 116 ~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~ni-G 194 (538)
++..++.+... .+....++.+++.|++..+..........|.+|+ + .+....+......++ |
T Consensus 336 ~~~~~~~~~~~------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~--------~---~~g~a~gi~~~~g~l~g 398 (467)
T PRK09556 336 IIFTLGVYQHA------TSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPK--------K---AIGVANGIKGTFAYLFG 398 (467)
T ss_pred HHHHHHHHHhc------CcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcch--------h---hHHHHHHHHHHHHHHHh
Confidence 44333222211 1233455666666654433333334566688775 2 234444555555564 5
Q ss_pred HHHHHHh-----h--------------hhhHHHHHHHHHHHHHHHHHH
Q 009308 195 VIASVQL-----S--------------SWRVISTFTVSATGITLFIFR 223 (538)
Q Consensus 195 ~~i~~~~-----~--------------g~~~~F~i~~~~~~l~~~~~~ 223 (538)
..+++.+ - ||+..|.+..++.+++.+..+
T Consensus 399 ~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 399 DSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred HHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHH
Confidence 4555443 2 488888877666666655444
No 127
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.76 E-value=2.2e-07 Score=97.40 Aligned_cols=151 Identities=13% Similarity=0.137 Sum_probs=109.0
Q ss_pred HHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhcc
Q 009308 48 HKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFE 127 (538)
Q Consensus 48 er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~ 127 (538)
..+.+......++.|+++ . |.+.++++.+.+.......++.++.|+++||+ |||+.+..+..+..++.+.+. .
T Consensus 212 ~~~~~~~~~~~lp~~~~~-~-g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~-~--- 284 (381)
T PRK03633 212 SGIVLGSLYGLMPLYLNH-Q-GMSDASIGFWMALLVSAGILGQWPIGRLADRF-GRLLVLRVQVFVVILGSIAML-S--- 284 (381)
T ss_pred HHHHHHHHHHHHHHHHHH-c-CCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-CcHHHHHHHHHHHHHHHHHHh-h---
Confidence 334444455667778865 7 89999999999999899999999999999995 999999998888888765543 1
Q ss_pred ccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh------
Q 009308 128 EAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL------ 201 (538)
Q Consensus 128 ~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~------ 201 (538)
....+..+++.+++.+...|...+.+.|..|+ + ++....+.+..+.++|.++|+.+
T Consensus 285 -------~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~--------~---~~~~~~~~~~~~~~lG~~igp~~~G~l~~ 346 (381)
T PRK03633 285 -------QAAMAPALFILGAAGFTLYPVAMAWACEKVEH--------H---ELVAMNQALLLSYTVGSLLGPSFTAMLMQ 346 (381)
T ss_pred -------hHHHHHHHHHHHHHHHhHHHHHHHHHHccCCH--------H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11234566777877777888888888888754 1 22233444455677888777765
Q ss_pred -hhhhHHHHHHHHHHHHHHHHHH
Q 009308 202 -SSWRVISTFTVSATGITLFIFR 223 (538)
Q Consensus 202 -~g~~~~F~i~~~~~~l~~~~~~ 223 (538)
.||++.|.+.+.+.+++.+..+
T Consensus 347 ~~g~~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 347 NYSDNLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred HhCccHHHHHHHHHHHHHHHHHH
Confidence 6788888887766665554433
No 128
>PRK12382 putative transporter; Provisional
Probab=98.73 E-value=2.7e-07 Score=96.92 Aligned_cols=151 Identities=15% Similarity=0.144 Sum_probs=114.3
Q ss_pred HHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccc
Q 009308 49 KLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEE 128 (538)
Q Consensus 49 r~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~ 128 (538)
.+++.++...++.|+++ . +.+ +++.....+.....++.++.|++.||+ ||||.+..+..+..++.+++....
T Consensus 229 ~~~~~~~~~~~~~~~~~-~-~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~--- 300 (392)
T PRK12382 229 GVGFAVIGTFVSLYFAS-K-GWA--MAGFTLTAFGGAFVLMRVLFGWMPDRF-GGVKVAIVSLLVETVGLLLLWLAP--- 300 (392)
T ss_pred HHHHhHHHHHHHHHHHh-c-CCc--hhHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHHHcc---
Confidence 35566666667778765 4 554 355666677777788999999999995 999999999999888887766543
Q ss_pred cccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-------
Q 009308 129 AASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL------- 201 (538)
Q Consensus 129 ~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~------- 201 (538)
+....+++.++.|++.+...|...+...|.+++ +++.+.+++++...++|..+++.+
T Consensus 301 -----~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-----------~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~ 364 (392)
T PRK12382 301 -----TAWVALAGAALTGAGCSLIFPALGVEVVKRVPS-----------QVRGTALGGYAAFQDIAYGVSGPLAGMLATS 364 (392)
T ss_pred -----cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345667788889999998888888888888765 234567777777888888888765
Q ss_pred hhhhHHHHHHHHHHHHHHHHHH
Q 009308 202 SSWRVISTFTVSATGITLFIFR 223 (538)
Q Consensus 202 ~g~~~~F~i~~~~~~l~~~~~~ 223 (538)
.||+..|.+.+++.+++.++.+
T Consensus 365 ~g~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 365 FGYPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred hCchHHHHHHHHHHHHHHHHHH
Confidence 6899999988877777666544
No 129
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.73 E-value=3.2e-07 Score=96.74 Aligned_cols=166 Identities=10% Similarity=0.021 Sum_probs=121.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
+..|.+...-++..++++++...++.|+.+ . |.+..+++...+.+..+..++.++.|+++|| +|||+.+.++..+..
T Consensus 205 ~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~-g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r-~~~~~~~~~~~~l~~ 281 (393)
T PRK09705 205 PRAWTLGVYFGLINGGYASLIAWLPAFYIE-I-GASAQYSGSLLALMTLGQAAGALLMPAMARH-QDRRKLLMLALVLQL 281 (393)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-c-CCChhhhhHHHHHHHHHHHHHHHHHHHHHhh-ccchHHHHHHHHHHH
Confidence 344555555666778888999999999986 8 9999999999999999999999999999999 499999999888888
Q ss_pred HhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHH
Q 009308 116 LGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSV 195 (538)
Q Consensus 116 ~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~ 195 (538)
++.+++..... +...+ ...+.|+|.|...|.......|.+++ ++ .+.+.++..+...+++.
T Consensus 282 ~~~~~~~~~~~-------~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~-------~~---~~g~~~g~~~~~~~~~~ 342 (393)
T PRK09705 282 VGFCGFIWLPL-------QLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQ-------PA---IAGKLVAFMQGIGFIIA 342 (393)
T ss_pred HHHHHHHHccc-------hHHHH--HHHHHHHhccchHHHHHHHHHhhcCC-------HH---HHHHHHHHHHHHHHHHH
Confidence 87765543221 11122 22456888888888777777777653 12 33456677777788888
Q ss_pred HHHHHh-------h-hhhHHHHHHHHHHHHHHHHHH
Q 009308 196 IASVQL-------S-SWRVISTFTVSATGITLFIFR 223 (538)
Q Consensus 196 ~i~~~~-------~-g~~~~F~i~~~~~~l~~~~~~ 223 (538)
.+++.+ . +|...|.+.+++.+...+...
T Consensus 343 ~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 378 (393)
T PRK09705 343 GLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITL 378 (393)
T ss_pred HHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH
Confidence 888765 2 477778777666665554433
No 130
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.72 E-value=1.7e-07 Score=100.94 Aligned_cols=167 Identities=15% Similarity=0.024 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhcc-CCchHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAF-SGRLNVIFYSTISC 114 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~-lGr~~~i~~~~~~~ 114 (538)
+.++..+...++.-+++++....++.|+++ + |++..+++.+.+.......++.+++|+++||. .++++...++..+.
T Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~-g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 318 (455)
T TIGR00892 241 RGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-K-GVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALL 318 (455)
T ss_pred chHHHHHHHHHHHHHHccchHHHHHHHHHH-c-CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHH
Confidence 445666666777778888888888999875 8 99999999999999999999999999999984 23444443333333
Q ss_pred --HHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHH
Q 009308 115 --ILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFF 192 (538)
Q Consensus 115 --~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~n 192 (538)
.++.+++.... +.+.+++.+++.|++.|+..++..+++.|.+|+ +++...++.+....+
T Consensus 319 ~~~l~~ll~~~~~--------~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~-----------~~~g~~~g~~~~~~~ 379 (455)
T TIGR00892 319 FNGLTHLLCALAG--------DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGA-----------QRFSSAVGLVTIVEC 379 (455)
T ss_pred HHHHHHHHHHHhc--------hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhH-----------HHHhhHHhHHHHHHH
Confidence 33333333322 355677889999999999999999999999876 234566778888889
Q ss_pred HHHHHHHHh-------h-hhhHHHHHHHHHHHHHHHHHH
Q 009308 193 FSVIASVQL-------S-SWRVISTFTVSATGITLFIFR 223 (538)
Q Consensus 193 iG~~i~~~~-------~-g~~~~F~i~~~~~~l~~~~~~ 223 (538)
+|.++|+.+ . +|+..|.++++..+++.+...
T Consensus 380 lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~~~ 418 (455)
T TIGR00892 380 CAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLFLA 418 (455)
T ss_pred HHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHHHH
Confidence 999999876 3 588999988877766655433
No 131
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.71 E-value=1.4e-05 Score=85.04 Aligned_cols=145 Identities=20% Similarity=0.167 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhcc---CCchHH-HHHHHHHHHHhHH
Q 009308 44 LIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAF---SGRLNV-IFYSTISCILGLV 119 (538)
Q Consensus 44 ~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~---lGr~~~-i~~~~~~~~~G~~ 119 (538)
.++...+.+.-+...|..|.++.. |.+...+|.+..+--..-.+.-|+.|.+.||. +||+|- ++++.+.+++...
T Consensus 20 gd~~~~~~~~~~~~yLl~fYTdv~-Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~ 98 (467)
T COG2211 20 GDFASNFAFGIVVLYLLFFYTDVF-GLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAV 98 (467)
T ss_pred hhhHHHHHHHHHHHHHHHHHhccc-CCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHH
Confidence 455555666667778889999999 99999999999999999999999999999963 577654 5667788888877
Q ss_pred HHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHH
Q 009308 120 LLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASV 199 (538)
Q Consensus 120 ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~ 199 (538)
++..+... +.+.+....++--.+.+++-..+.....++.++..+ ||+||.++. +|-.++.++|.++..
T Consensus 99 l~F~~p~~--~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~-------d~~ER~~l~---s~R~~~~~~g~~l~~ 166 (467)
T COG2211 99 LLFITPDF--SMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQ-------DPQERASLT---SWRMVFASLGGLLVA 166 (467)
T ss_pred HHHcCCCc--ccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcC-------CHHHHHHHH---HHHHHHHHHHHHHHH
Confidence 77765421 112345556666777888888888888899999975 477776444 676778889977664
Q ss_pred Hh
Q 009308 200 QL 201 (538)
Q Consensus 200 ~~ 201 (538)
.+
T Consensus 167 ~~ 168 (467)
T COG2211 167 VL 168 (467)
T ss_pred HH
Confidence 43
No 132
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.69 E-value=2.1e-07 Score=99.12 Aligned_cols=167 Identities=12% Similarity=0.091 Sum_probs=118.5
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCCh--------HHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHH
Q 009308 39 LILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNV--------VEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYS 110 (538)
Q Consensus 39 ~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~--------~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~ 110 (538)
+.++...++.-.++......++.|+++ . +.++ .+.+...+.......++.++.|+++||+ |||+++.++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-g~r~~l~~~ 287 (418)
T TIGR00889 211 AIFFFFSMLLGAPLQITNIFGNGFLHE-F-GRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-GIKKVMLLS 287 (418)
T ss_pred eeHHHHHHHHHhHHHHHHHhHHHHHHH-h-cccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHH
Confidence 344444555555555555666778765 4 4443 5668888888888899999999999995 999999999
Q ss_pred HHHHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhH-H
Q 009308 111 TISCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWL-I 189 (538)
Q Consensus 111 ~~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y-~ 189 (538)
.++..++..++......+ .....+++..++.|++.+...++...+++|.+|+ + .+.+.+++++ .
T Consensus 288 ~~~~~v~~~l~~~~~~~~----~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~--------~---~~g~~~g~~~~~ 352 (418)
T TIGR00889 288 LVAWALRFGFFAYGDPEY----FGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPV--------H---IRASAQGLFTLM 352 (418)
T ss_pred HHHHHHHHHHHHHcCcch----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH--------H---HHHHHHHHHHHH
Confidence 999998877666532100 1245677789999999999999999999999876 2 3455666664 4
Q ss_pred HHHHHHHHHHHh-------h------hhhHHHHHHHHHHHHHHHHHH
Q 009308 190 PFFFSVIASVQL-------S------SWRVISTFTVSATGITLFIFR 223 (538)
Q Consensus 190 ~~niG~~i~~~~-------~------g~~~~F~i~~~~~~l~~~~~~ 223 (538)
..++|..+|+.+ . ||+..|.++++..+++.+.+.
T Consensus 353 ~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~ 399 (418)
T TIGR00889 353 CNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFM 399 (418)
T ss_pred HHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHH
Confidence 456777777665 2 488888877666665555443
No 133
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.69 E-value=5.4e-07 Score=95.01 Aligned_cols=154 Identities=12% Similarity=-0.028 Sum_probs=111.3
Q ss_pred HHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhh
Q 009308 45 IFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFIT 124 (538)
Q Consensus 45 ~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~ 124 (538)
.++.-..++.....++.|+++ . |++..+++.+...+.....++.++.|+++||+ |||+++..+.+...++.+++...
T Consensus 229 ~~~~~~~~~~~~~~~p~~~~~-~-g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~ 305 (406)
T PRK11551 229 YFFTLIVLYFLLNWLPSLLVG-Q-GLSRSQAGLVQIAFNIGGALGSLLIGALMDRL-RPRRVVLLIYAGILASLAALAAA 305 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-C-CCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhc
Confidence 344445566667777888875 8 99999999999999999999999999999995 99999988777666665554433
Q ss_pred hccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh---
Q 009308 125 AFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL--- 201 (538)
Q Consensus 125 ~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~--- 201 (538)
. +...+.+..++.|++.++..+...++..|.+|+ + .+.+..++++...++|..+++.+
T Consensus 306 ~--------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~--------~---~~g~~~g~~~~~~~~g~~~g~~~~g~ 366 (406)
T PRK11551 306 P--------SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPT--------Q---VRGTGVGAAVAVGRLGSMAGPLLAGQ 366 (406)
T ss_pred C--------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcch--------h---hhhhhhhHHHHhhhHHHHHHhhhHhh
Confidence 2 233455666778888888888889999999876 2 34556677777778888888776
Q ss_pred -----hhhhHHHHHHHHHHHHHHH
Q 009308 202 -----SSWRVISTFTVSATGITLF 220 (538)
Q Consensus 202 -----~g~~~~F~i~~~~~~l~~~ 220 (538)
.+|...+.+.....+++.+
T Consensus 367 l~~~~~~~~~~~~~~~~~~~~~~~ 390 (406)
T PRK11551 367 LLALGRSTVGVIGASIPVILVAAL 390 (406)
T ss_pred hhccCCchHHHHHHHHHHHHHHHH
Confidence 2455555555444444433
No 134
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.68 E-value=3.7e-07 Score=94.43 Aligned_cols=172 Identities=12% Similarity=0.040 Sum_probs=114.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHH-HHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNV-IFYSTISC 114 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~-i~~~~~~~ 114 (538)
+.++.+....++..+++.+....++.|+++.+ |.+..+++.+.........++.+++|+++||+ |||+. +.......
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~ 292 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQER-GLSILEAGFMASLPGIVGFIGMILGGRLSDLL-LRRGKSLVFARKTA 292 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-cccHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhHHHHHH
Confidence 45667777788888888889999999999889 99999999999999999999999999999995 88861 11111111
Q ss_pred HHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHH
Q 009308 115 ILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFS 194 (538)
Q Consensus 115 ~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG 194 (538)
.++.++..+...... . .+.....+...+.+.+..+..+...++.+|.+|+ + .+...++++....++|
T Consensus 293 ~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~---~~g~~~~~~~~~~~~g 359 (399)
T TIGR00893 293 IIAGLVLSLLMFATN-Y-VNIPYAALALVALGFFGLGAGAIGWALISDNAPG--------N---IAGLTGGLINSLGNLG 359 (399)
T ss_pred HHHHHHHHHHHHHhc-c-chhHHHHHHHHHHHHhchhhhhHHHHHHHhhcCh--------h---HHHHHHHHHHHHHHHh
Confidence 111111111000000 0 0112223333333333333789999999999876 2 3456667777788899
Q ss_pred HHHHHHh-------hh-hhHHHHHHHHHHHHHHHHH
Q 009308 195 VIASVQL-------SS-WRVISTFTVSATGITLFIF 222 (538)
Q Consensus 195 ~~i~~~~-------~g-~~~~F~i~~~~~~l~~~~~ 222 (538)
..+++.+ .| |...|.+.++..+++.+..
T Consensus 360 ~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 360 GIVGPIVIGAIAATTGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred hhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHH
Confidence 9888776 46 8888887776666555543
No 135
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.67 E-value=7.7e-07 Score=93.42 Aligned_cols=162 Identities=12% Similarity=0.055 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
+.++..+...++-..++.+..+.+++|+++ + |.+..+++...+.......+..++.|++.||+ |+|+++.++.+...
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~-g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~-g~~~~l~~~~~~~~ 281 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-A-GISASATGLLWGIGVLAEIIIFAFSNKLFQNC-SARDLLLISAIACV 281 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-C-CCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhC-CHHHHHHHHHHHHH
Confidence 556666677777888888889999999976 9 99999999999988888888899999999995 99999999999999
Q ss_pred HhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhH-HHHHHH
Q 009308 116 LGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWL-IPFFFS 194 (538)
Q Consensus 116 ~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y-~~~niG 194 (538)
++++++..+. +.+.+++...++|++.|...+....++.+. |+ +++ ....+.+. .+..+|
T Consensus 282 ~~~~~~~~~~--------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~--------~~~---~~~q~~~~~~~~g~g 341 (382)
T TIGR00902 282 GRWAIIGAIE--------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PG--------SEI---AKLQALYNALAMGGL 341 (382)
T ss_pred HHHHHHHhHh--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CH--------hhH---HHHHHHHHHHHHHHH
Confidence 9998877654 466788889999999999999999999987 65 122 22223332 234455
Q ss_pred HHHHHHh-------hhhhHHHHHHHHHHHHHHHH
Q 009308 195 VIASVQL-------SSWRVISTFTVSATGITLFI 221 (538)
Q Consensus 195 ~~i~~~~-------~g~~~~F~i~~~~~~l~~~~ 221 (538)
..+++.+ .|+ ..|.+.++..++++++
T Consensus 342 ~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 342 IAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 5555554 454 4455555555555433
No 136
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.66 E-value=7.1e-07 Score=96.38 Aligned_cols=192 Identities=15% Similarity=0.074 Sum_probs=141.8
Q ss_pred ccccHHHHHhhhcCcCcccccchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHH
Q 009308 11 LHSSFRAIIRKLRFISWISYNICFCKAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTV 90 (538)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~ 90 (538)
+..++++..+.-++.+. ++....+++ .-++-+=+...+.+....|.++.+ |++..+...+...-+..+.+++
T Consensus 263 ~~~g~~~l~~t~k~~~~------~~~~~~fLi-a~~l~~dg~~ti~~~~~i~a~~~l-g~s~~~l~~~~l~~~i~a~~Ga 334 (477)
T PF11700_consen 263 LRFGFKRLWRTFKEIRK------LRQLFLFLI-AYFLYSDGVNTIISFAGIYATEVL-GMSTTQLIVFGLVVQIVAIIGA 334 (477)
T ss_pred HHHHHHHHHHHHHHHHh------ChHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhc-CcCHHHHHHHHHHHHHHHHHHH
Confidence 45566666665544433 333445444 455566788889999999999999 9999999999999999999999
Q ss_pred HHhhhhhhccCCch--HHHHHHHHHHHHhHHHHHhhhccccc-cchhHHHHHHHHHHHHHhchhhcccchhhhhcccccc
Q 009308 91 IFLTCIPDAFSGRL--NVIFYSTISCILGLVLLFITAFEEAA-SPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAH 167 (538)
Q Consensus 91 l~gG~laD~~lGr~--~~i~~~~~~~~~G~~ll~~~~~~~~~-~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~ 167 (538)
++.|++.||+ |.| +++.++.++..+-.+.-.+. ..+.. .-.+.+.+++.=++.|+..|...+..-++.++..|+
T Consensus 335 ~~~g~l~~r~-g~k~~~~l~~~l~~~~~i~~~g~~G-~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~- 411 (477)
T PF11700_consen 335 LLFGWLQDRF-GPKTKRTLLISLILWIIIPLYGLFG-FWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPP- 411 (477)
T ss_pred HHHHHHHHHh-CCchhHHHHHHHHHHHHHHHHHHHH-hhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCC-
Confidence 9999999995 999 89888887774422222220 00000 001345667777789999999999999999999987
Q ss_pred CccccCcccccceeeeehhhHHHHHHHHHHHHHh--------hhhhHHHHHHHHHHHHHHHHHH
Q 009308 168 EPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL--------SSWRVISTFTVSATGITLFIFR 223 (538)
Q Consensus 168 ~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~--------~g~~~~F~i~~~~~~l~~~~~~ 223 (538)
++...+|+.|.+..-..+.+||.+ .+.|.++..-.++++++++++.
T Consensus 412 ----------g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~ 465 (477)
T PF11700_consen 412 ----------GREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLF 465 (477)
T ss_pred ----------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHh
Confidence 234689999999999999999987 3477888777777777776654
No 137
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.66 E-value=4.8e-05 Score=78.95 Aligned_cols=359 Identities=15% Similarity=0.114 Sum_probs=181.7
Q ss_pred ccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCC-----ch-HHHHHHHHHHHHhHHHHHhhhcccc--------c
Q 009308 65 DYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSG-----RL-NVIFYSTISCILGLVLLFITAFEEA--------A 130 (538)
Q Consensus 65 ~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lG-----r~-~~i~~~~~~~~~G~~ll~~~~~~~~--------~ 130 (538)
.++ +.+..-.+..++..... ....+..|+.+|++ + || +=|..|..++..|..+...+...-. +
T Consensus 8 vEL-~vpA~lv~~lval~~~~-ap~R~~~G~~SD~~-~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 8 VEL-GVPAWLVALLVALHYLV-APLRVWFGHRSDTH-PSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred HHh-ccHHHHHHHHHHHHHHH-HHHHHHhccccccC-cccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 457 77777777777777664 44688899999996 4 33 3466677777777665554422111 0
Q ss_pred cchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHhhhhh-----
Q 009308 131 SPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQLSSWR----- 205 (538)
Q Consensus 131 ~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~~g~~----- 205 (538)
.........++..+.|+|.+...++..++.+|..|+ + +|.+..++.|...-+|..++..+.|+-
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e--------~---~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s 153 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLALLADLAPE--------E---RRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFS 153 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCH--------h---hhhhhHHHHHHHHHHHHHHHHHHHHHHccccC
Confidence 111223444556678888888999999999999876 2 345556666777778888876652211
Q ss_pred ------HHHHHHHHHHHHHHHHHHhcccceeeccCCCCCCCCchHHHHHHHHHHHhhccCCCCCCC-ccccccccCcccc
Q 009308 206 ------VISTFTVSATGITLFIFRLGIRFFHSTEITGPAAGSSLAVVFRVVKAALSKRHLNNPYSS-NQLYRNDQNQVHL 278 (538)
Q Consensus 206 ------~~F~i~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~l~~~~~v~~~a~~~~~~~~~~~~-~~l~~~~~~~~~~ 278 (538)
..-..+.+.+.+.++-.+-..+++....+..+.+..++.+..+.+. ++ |... ...+.
T Consensus 154 ~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~~~~~~~~f~~a~~~~~---~~-----~~a~~f~~fl-------- 217 (403)
T PF03209_consen 154 PERLIQVIQGVALIALLLNLIALWGQEPRRSRRAAAAERPRPPFREAWRQVW---AS-----PQARRFFVFL-------- 217 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccCCCCCCccHHHHHHHHH---hC-----CChhHHHHHH--------
Confidence 1112233333333332222222222111000001122222211111 00 0000 00000
Q ss_pred cCCccccchhhhcccccCCCCCCCcccccccccccccchhhHHHHHHhHHHHHhhhhhhHHhhccccchhhhhcccCCCc
Q 009308 279 FPQVKFFRWLDKAAIIEPSTTLISPEEQEKAGRLCTVAQVRDTKLMLKMVPIWTTFVVFGLIVSTGQTFFPEQGNQLNPK 358 (538)
Q Consensus 279 ~~~~~~~~~l~~a~~~~~~~~~~~~~g~~~~~~~~~~~~ved~k~~l~~l~l~~~~~~f~~~~~Q~~s~~~~q~~~~~~P 358 (538)
++........ |-.+-|.|+. .+.. .+.|..++- .+|..-.+..+.. +.+. .
T Consensus 218 --------~l~t~a~~~Q-D~iLEPygg~----Vfgm-sv~eTT~Lt---a~~~~G~L~G~~~----~g~~-----l--- 268 (403)
T PF03209_consen 218 --------FLGTLAFFMQ-DVILEPYGGE----VFGM-SVGETTRLT---AFWGGGTLLGMLL----AGFL-----L--- 268 (403)
T ss_pred --------HHHHHHHHhh-HHHcCCchhH----HcCC-CHHHHHHHH---HHHHHHHHHHHHH----HHHH-----h---
Confidence 0000000000 0000011221 1111 122222221 1222211111111 0010 0
Q ss_pred ccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCccchhhHhHHHHHHHHHHHHHHhhhhHHHHH
Q 009308 359 EAKKKGAKIVRIWAGMVLSTICCAVAWRVEVHRLIIINNKGLLGNTDEVIPMSIFWLAPQFCLLGLMKGLARDGINKFLA 438 (538)
Q Consensus 359 d~~g~~s~~~ri~iG~~l~~l~~~~~~~~e~~~~~~~~~~g~~~~~~~~~~~s~~~li~~~~l~glgE~l~~p~~~~~~~ 438 (538)
. ++. .+.+...+|..+.++++....+.. ..-+.+.+.+..+++|+|-++..+..++...
T Consensus 269 ~-~~~-~~~~~a~~G~~~~~~~f~lii~a~-------------------~~~~~~~~~~~~~l~G~g~G~f~vgals~mM 327 (403)
T PF03209_consen 269 S-RRL-GKKRTAALGCLLGALAFALIILAG-------------------PLGSPWLFRPGVFLLGLGNGLFTVGALSLMM 327 (403)
T ss_pred c-CCC-CchHHHHHHHHHHHHHHHHHHHHH-------------------hcccchHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 0 111 111222356666666665433221 0124556778889999999999999999999
Q ss_pred hhCCcchhhHHHHHHHHHHHHHHHHHHHhhh-ccc--ccccccCCCcc--hhHHHHHHHHHHHHHHHHHHhh
Q 009308 439 DQFPEPMHDCVSAITELVTGFASFVNIVSVY-FNK--SLFADTLNSSR--LDEYYKMLTIVSFINICYFWWI 505 (538)
Q Consensus 439 ~~aP~~~rg~~~gl~~l~~~iG~~l~~~l~~-~~~--~~~~~~~n~~~--l~~~f~~la~l~~v~~~~~~~~ 505 (538)
+.++++..|+.+|.|..+++++..++..+++ +.+ .++.++ ++- |...|.+=+++.++++.+...+
T Consensus 328 ~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~--~~~~aY~~VF~lEa~ll~~a~~ll~~l 397 (403)
T PF03209_consen 328 DLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGN--SPALAYGVVFALEAVLLLAALVLLGRL 397 (403)
T ss_pred hCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC--CcchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999988 333 233221 122 2335555555555555554433
No 138
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.65 E-value=5.4e-07 Score=93.66 Aligned_cols=172 Identities=12% Similarity=0.035 Sum_probs=125.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
+.++..+...++--.+.|...+.+.+|+++.- |++.+..+++...|.....++.+++|+++|| +.++++.....+..
T Consensus 211 p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~-g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~a 287 (394)
T COG2814 211 PGVLLGLLATFLFMTGHFALYTYIRPFLESVA-GFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLLA 287 (394)
T ss_pred chHHHHHHHHHHHHcchhhhHHhHHHHHHHcc-CCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHH
Confidence 45567777888888899999999999999989 9999999999999999999999999999999 88899998888888
Q ss_pred HhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeee-ehhhHHHHHHH
Q 009308 116 LGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARK-RVWWLIPFFFS 194 (538)
Q Consensus 116 ~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~-f~~~y~~~niG 194 (538)
+..+.+.+.+. +.+...+..++-|++.+........-.++..|+ .++.-.+. ...++.++.+|
T Consensus 288 ~~~l~l~~~~~-------~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~---------~~~~a~sl~~aa~nlgia~G 351 (394)
T COG2814 288 LALLALTFTGA-------SPALALALLFLWGFAFSPALQGLQTRLARLAPD---------AADLAGSLNVAAFNLGIALG 351 (394)
T ss_pred HHHHHHHHhcc-------hHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCC---------chHHHHHHHHHHHHHHHHHH
Confidence 87777766542 334445555555555554444444444442222 11122222 24455666666
Q ss_pred HHHHHHh---hhhhHHHHHHHHHHHHHHHHHHhcc
Q 009308 195 VIASVQL---SSWRVISTFTVSATGITLFIFRLGI 226 (538)
Q Consensus 195 ~~i~~~~---~g~~~~F~i~~~~~~l~~~~~~~~~ 226 (538)
+.+|..+ +|+....+++++..++++.+.+...
T Consensus 352 A~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~ 386 (394)
T COG2814 352 AALGGLVLDALGYAATGWVGAALLLLALLLALLSA 386 (394)
T ss_pred HHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666655 7888889999998888888766544
No 139
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.65 E-value=4.9e-07 Score=98.01 Aligned_cols=166 Identities=8% Similarity=-0.148 Sum_probs=106.0
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchH-------HHHHH
Q 009308 38 ALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLN-------VIFYS 110 (538)
Q Consensus 38 ~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~-------~i~~~ 110 (538)
.|.+....++.-..+++....++.|+.+.+ |++..+++.+...+.....++.+++|+++||+ |||+ .+.+.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~-g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-~~r~~~~~r~~~~~~~ 331 (476)
T PLN00028 254 TWILALTYGYSFGVELTMDNIIAEYFYDRF-GLSLETAGAIAASFGLMNLFARPAGGYLSDVA-ARRFGMRGRLWALWIV 331 (476)
T ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHhcCcchhHHHHHHH
Confidence 444444444444445556667888998889 99999999999999999999999999999995 8752 22222
Q ss_pred HHHHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHH
Q 009308 111 TISCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIP 190 (538)
Q Consensus 111 ~~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~ 190 (538)
..+..++.+++.... +.+...+..++.+++.++..+...++..+..++ .+....++...+
T Consensus 332 ~~l~~i~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~------------~~g~~~g~~~~~ 391 (476)
T PLN00028 332 QTLGGVFCIWLGRAN--------SLGAAIVVMILFSIFVQAACGATFGIVPFVSRR------------SLGVISGLTGAG 391 (476)
T ss_pred HHHHHHHHHHhcccc--------hHHHHHHHHHHHHHHHHHhhhhhcccCcccChh------------hchhhhhhhhcc
Confidence 222222222221111 233444555666666665555555555554322 234455555667
Q ss_pred HHHHHHHHHHh------hhhhHHHHHHHHHHHHHHHHHHhc
Q 009308 191 FFFSVIASVQL------SSWRVISTFTVSATGITLFIFRLG 225 (538)
Q Consensus 191 ~niG~~i~~~~------~g~~~~F~i~~~~~~l~~~~~~~~ 225 (538)
.++|+.+++.+ .+|..+|.+.+++.+++.++.++.
T Consensus 392 g~lg~~i~~~l~~~~~~~~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 392 GNVGAVLTQLLFFTGSSYSTETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred ccHHHHHHHHHHHhcCCccHhhHHHHHHHHHHHHHHHHHhe
Confidence 78888888776 258899988887777777766554
No 140
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.65 E-value=1e-06 Score=93.08 Aligned_cols=168 Identities=9% Similarity=0.025 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHH-HHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIF-YSTISC 114 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~-~~~~~~ 114 (538)
+.++.+....++...++++....++.|+++ + |++..+++.+.+.......++.++.|+++||+ |||+.+. .+.+..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~-g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~l~~ 298 (402)
T TIGR00897 222 PNVLLGGMVRIINTIGLFGFAVFLPMFVAE-L-GFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKL-GWMNTVRWFGGVGC 298 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-c-CCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHH
Confidence 455666666777888888888888888865 8 99999999999999999999999999999995 9988764 333333
Q ss_pred HHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHH
Q 009308 115 ILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFS 194 (538)
Q Consensus 115 ~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG 194 (538)
.++.+.+...... ...+.+..++..++.|++.+...+. .+...|..|+ ++...+++++...++|
T Consensus 299 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~~------------~~g~~~g~~~~~~~lg 362 (402)
T TIGR00897 299 GIFTLALYYIPQH---FGHSFAVALIIAIALGIFLAGYVPL-AAVFPTLAPK------------HKGAAMSVLNLSAGLS 362 (402)
T ss_pred HHHHHHHHHHHHc---cCCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCcc------------hhHHHHHHHHHHHHHH
Confidence 3332222221100 0012445566777788888776553 4455554221 3567778888889999
Q ss_pred HHHHHHh-------hhhhHHHHHHHHHHHHHHHHH
Q 009308 195 VIASVQL-------SSWRVISTFTVSATGITLFIF 222 (538)
Q Consensus 195 ~~i~~~~-------~g~~~~F~i~~~~~~l~~~~~ 222 (538)
..+++.+ .||...|.+.+++.+++.++.
T Consensus 363 ~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~ 397 (402)
T TIGR00897 363 AFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLT 397 (402)
T ss_pred HHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHH
Confidence 8888875 578888887776666555443
No 141
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.64 E-value=4.9e-07 Score=96.07 Aligned_cols=152 Identities=10% Similarity=0.001 Sum_probs=109.2
Q ss_pred HHHHHhHHHHHHHhccc---CCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhc
Q 009308 50 LVDIAVVAVLITYLTDY---PRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAF 126 (538)
Q Consensus 50 ~~~~g~~~~l~~yl~~~---l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~ 126 (538)
..+......++.|+.+. . +.+..+.+.+.+.......++.+++|+++||+ |||+.+.++.++..++.+++.++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~l~~~~~~l~~~~~- 313 (420)
T PRK09528 237 CFYDVFDQQFPNFFASFFATP-EQGTRVFGYLNSFQVFLEALIMFFAPFIINRI-GAKNALLLAGTIMAVRIIGSGFAT- 313 (420)
T ss_pred HHHHHHHHHHHHHHHHHHhcc-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcchhhHHHHHHHHHHHHHHHhcc-
Confidence 33433444456666543 3 45667788888888888889999999999995 999999999999998887776653
Q ss_pred cccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehh-hHHHHHHHHHHHHHh----
Q 009308 127 EEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVW-WLIPFFFSVIASVQL---- 201 (538)
Q Consensus 127 ~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~-~y~~~niG~~i~~~~---- 201 (538)
+.+.+++.+++.+++.+...+....++.|.+|+ + .+...+.. +..+.++|..+++.+
T Consensus 314 -------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~--------~---~~a~~~~~~~~~~~~lg~~ig~~~~G~l 375 (420)
T PRK09528 314 -------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDV--------R---LSATIYLVGFQFAKQLGAVFLSTLAGNL 375 (420)
T ss_pred -------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc--------c---ceeeeeeehHHHHHHHHHHHHHHHHHHH
Confidence 355677888899999988888888888888765 1 22233322 345567777777665
Q ss_pred ---hhhhHHHHHHHHHHHHHHHHH
Q 009308 202 ---SSWRVISTFTVSATGITLFIF 222 (538)
Q Consensus 202 ---~g~~~~F~i~~~~~~l~~~~~ 222 (538)
.||+..|.+.+++.++..++.
T Consensus 376 ~~~~G~~~~f~~~~~~~~i~~~~~ 399 (420)
T PRK09528 376 YDSIGFQGTYLILGGIVLLFTLIS 399 (420)
T ss_pred HHhhCchHHHHHHHHHHHHHHHHH
Confidence 589999987666655444433
No 142
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.64 E-value=6.1e-07 Score=95.47 Aligned_cols=152 Identities=15% Similarity=0.084 Sum_probs=114.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHH
Q 009308 35 CKAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISC 114 (538)
Q Consensus 35 ~~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~ 114 (538)
.|.++.++...++..++++........|++..+ + +..+++.+.........++.++.|+++||+ |||+++.++.++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-g~~~~~~~~~~~~ 297 (437)
T TIGR00792 221 NDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVL-G-DPELFSYMGSIAIVAGLIGVLLFPRLVKKF-GRKILFAGGILLM 297 (437)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcchhheeEeeec-C-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHH
Confidence 356666777788888888776666666666666 6 566777777778888899999999999995 9999999999998
Q ss_pred HHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccC-cccccceeeeehhhHHHHHH
Q 009308 115 ILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLN-ISEHRVSARKRVWWLIPFFF 193 (538)
Q Consensus 115 ~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~-~~~r~~~~~~f~~~y~~~ni 193 (538)
+++.+++.+.. .+.+.+++..++.++|.+...+...++++|..|. ++ +..++....+++.+.+..++
T Consensus 298 ~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~G~~~~~~~~~~~~ 365 (437)
T TIGR00792 298 VLGYLIFFFAG-------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDY-----GEWKTGVRAEGLVYSVRTFVRKL 365 (437)
T ss_pred HHHHHHHHHcc-------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh-----hhhhcCccchHHHHHHHHHHHHH
Confidence 88877766532 1344566777889999999999999999999764 11 00112345567777888888
Q ss_pred HHHHHHHh
Q 009308 194 SVIASVQL 201 (538)
Q Consensus 194 G~~i~~~~ 201 (538)
|..+++.+
T Consensus 366 g~~lg~~i 373 (437)
T TIGR00792 366 GQALAGFL 373 (437)
T ss_pred HHHHHHHH
Confidence 88888765
No 143
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.63 E-value=7.4e-07 Score=96.62 Aligned_cols=140 Identities=12% Similarity=0.010 Sum_probs=98.6
Q ss_pred HhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccch
Q 009308 54 AVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPL 133 (538)
Q Consensus 54 g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~ 133 (538)
+....++.|+++.+ |++..+++.+.+.+..+..++.+++|+++||+ |||+.+.++..+..++.+++..... .
T Consensus 293 ~~~~~lp~~l~~~~-g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~------~ 364 (496)
T PRK03893 293 PIQALLPTYLKTDL-GYDPHTVANVLFFSGFGAAVGCCVGGFLGDWL-GTRKAYVCSLLISQLLIIPVFAIGG------A 364 (496)
T ss_pred hHHHHHHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHhhccc------c
Confidence 35567889998789 99999999999999999999999999999995 9999988887776665544333211 1
Q ss_pred hHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-------hhhhH
Q 009308 134 LKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL-------SSWRV 206 (538)
Q Consensus 134 ~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~-------~g~~~ 206 (538)
..+...+..++.+....+..+..+++..|.+|+ +++.+.+++++...++|..+++.+ .||+.
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~ 433 (496)
T PRK03893 365 NVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDT-----------EQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGT 433 (496)
T ss_pred HHHHHHHHHHHHHHHhcccchhhHHHHHhhCCH-----------HHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHH
Confidence 223333334443333333456777888888875 245667777777788888888765 56776
Q ss_pred HHHHHH
Q 009308 207 ISTFTV 212 (538)
Q Consensus 207 ~F~i~~ 212 (538)
.+.+..
T Consensus 434 ~~~~~~ 439 (496)
T PRK03893 434 ALASLS 439 (496)
T ss_pred HHHHHH
Confidence 664433
No 144
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.60 E-value=1e-06 Score=94.79 Aligned_cols=168 Identities=7% Similarity=0.057 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccC-CchHHH-HHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFS-GRLNVI-FYSTIS 113 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~l-Gr~~~i-~~~~~~ 113 (538)
+.+|.+....++....+++....++.|+++.. |++..+++.....+.....++.+++|+++||+. |||+.. .....+
T Consensus 253 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~-g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l 331 (452)
T PRK11273 253 KLLWYIAIANVFVYLLRYGILDWSPTYLKEVK-HFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTL 331 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHH
Confidence 55677777777777888888899999999888 999999999988888888899999999999942 444432 222333
Q ss_pred HHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHH
Q 009308 114 CILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFF 193 (538)
Q Consensus 114 ~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~ni 193 (538)
..++.+++.+... .+.....++.++.|.+.....+....+..|.+|+ +.+.+..+++....++
T Consensus 332 ~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~-----------~~~g~~~g~~~~~~~~ 394 (452)
T PRK11273 332 VTIATIVYWLNPA------GNPTVDMACMIVIGFLIYGPVMLIGLHALELAPK-----------KAAGTAAGFTGLFGYL 394 (452)
T ss_pred HHHHHHHHHHhcc------cChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCh-----------hhhhhHHHHHHHHHHH
Confidence 3334333322210 0222333444444443322222334456677765 2345566666666677
Q ss_pred HHHH-HHHh-------hhhhHHHHHHHHHHHHHHHH
Q 009308 194 SVIA-SVQL-------SSWRVISTFTVSATGITLFI 221 (538)
Q Consensus 194 G~~i-~~~~-------~g~~~~F~i~~~~~~l~~~~ 221 (538)
|+.+ ++.+ .||+..|.+..+..+++++.
T Consensus 395 g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~ 430 (452)
T PRK11273 395 GGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVIL 430 (452)
T ss_pred HHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 6543 4543 58999998777666655443
No 145
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.59 E-value=6.5e-07 Score=93.65 Aligned_cols=136 Identities=13% Similarity=0.066 Sum_probs=100.8
Q ss_pred HHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhh
Q 009308 46 FSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITA 125 (538)
Q Consensus 46 ~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~ 125 (538)
.+..+...+....++.|+++.+ |++..+++.+.........++.++.|+++||+ |||+++.++..+..+....+....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~ 325 (405)
T TIGR00891 248 LFANLYSHPIQDLLPTYLKADL-GLSPHTVANIVVFSNIGAIVGGCVFGFLGDWL-GRRKAYVCSLLAGQLLIIPVFAIG 325 (405)
T ss_pred HHHHHHHhhhhhhhHHHHHHHh-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchhhhHHHHHHHHHHHHHHHHhC
Confidence 3334445566677888998889 99999999999999999999999999999995 999999888776543322222111
Q ss_pred ccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh
Q 009308 126 FEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL 201 (538)
Q Consensus 126 ~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~ 201 (538)
.+...+.++.++.++..+...+..++++.|.+|+ + .+.+.++..+...++|..+++.+
T Consensus 326 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~---~~~~~~g~~~~~~~~g~~~g~~~ 383 (405)
T TIGR00891 326 -------ANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPT--------D---QRAAGLGFTYQLGNLGGALAPII 383 (405)
T ss_pred -------CchHHHHHHHHHHHHHHccchhhHHHHHhhhCCc--------c---hhHHHhhHHHHHHHHHHHHHHHH
Confidence 1244556666777777777777888899998876 2 34566777777888999888876
No 146
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.59 E-value=1.2e-06 Score=90.67 Aligned_cols=170 Identities=14% Similarity=0.076 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccC-CchHHHHHH-HHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFS-GRLNVIFYS-TIS 113 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~l-Gr~~~i~~~-~~~ 113 (538)
+.+|++..++++--+.=||+..-.+.|+.|.. |+|..+|++..+.|-.+...++++.||++||.+ |||....+. .+.
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k-~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~ 330 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVK-GFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLL 330 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhc-CCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHH
Confidence 67799999999999999999999999999999 999999999999999999999999999999999 877655433 333
Q ss_pred HHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHH
Q 009308 114 CILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFF 193 (538)
Q Consensus 114 ~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~ni 193 (538)
..++.+.+..+.. .+..+..+.++++|+-.-+-.-.+.....|..|+ + .-+.+-+.-.++..+
T Consensus 331 i~~~~~~~w~~~~------~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK-----~------AaGtA~Gf~Glf~Yl 393 (448)
T COG2271 331 ITASLVLYWLAPN------GSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPK-----K------AAGTATGFVGLFAYL 393 (448)
T ss_pred HHHHHHHHHcCCC------ccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccH-----h------hccchhchhhhHHHH
Confidence 3334444443321 2456777778888888777666666667777665 1 122222333345565
Q ss_pred -HHHHHHHh-------hhhhHHHHHHHHHHHHHHHHHH
Q 009308 194 -SVIASVQL-------SSWRVISTFTVSATGITLFIFR 223 (538)
Q Consensus 194 -G~~i~~~~-------~g~~~~F~i~~~~~~l~~~~~~ 223 (538)
|+..+... +||...|.+-.+..+++.+.++
T Consensus 394 ~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~ 431 (448)
T COG2271 394 IGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLL 431 (448)
T ss_pred hhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHH
Confidence 77777554 6999998876555555555444
No 147
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.58 E-value=1.5e-05 Score=80.88 Aligned_cols=171 Identities=12% Similarity=0.061 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHH
Q 009308 43 GLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLF 122 (538)
Q Consensus 43 ~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~ 122 (538)
+..-.+...+....+.+.+-+.... +.+..++..+.........+++..-|.++|++ ||||...+..+...+--++-.
T Consensus 84 g~gwmad~m~~m~~s~i~~~l~~~w-~~s~~q~~llt~~v~~gmllga~~w~l~~d~~-grr~~f~~T~l~t~v~~~is~ 161 (528)
T KOG0253|consen 84 GMGWMADAMEMMLLSLILPALDEVW-GPSEGQAPLLTLSVFLGMLVGAMVWGLSADTI-GRRKGFNLTFLVTGVFGVISG 161 (528)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhh-chhhhhhhHHHHHHHhhhhhhhhhhheehhhh-hcchhhhhhHHHHHHHHHhhc
Confidence 3333444445444555555555667 89999999998888888999999999999995 999998877776655333222
Q ss_pred hhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-
Q 009308 123 ITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL- 201 (538)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~- 201 (538)
.+ .+...+.+.|.+.++|.|+ -|...++-++..|. ..|....-.+.+|-.+..+...++-.+
T Consensus 162 ~s--------pnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~--------~~r~~~~V~~~~waig~v~ea~law~vm 224 (528)
T KOG0253|consen 162 AS--------PNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPS--------SHRWLLTVMSFFWAIGQVFEALLAWGVM 224 (528)
T ss_pred CC--------CCeehhhHHHHHHhccCCC-ccHhHHHHHHhccC--------cCCCcchhHHHHHHHHHHHHHHHHHHHH
Confidence 22 2577889999999999999 89999998998876 122233323333322333333333332
Q ss_pred --hhhhHHH-HHHHHHHHHHHHHH-Hhcccceeec
Q 009308 202 --SSWRVIS-TFTVSATGITLFIF-RLGIRFFHST 232 (538)
Q Consensus 202 --~g~~~~F-~i~~~~~~l~~~~~-~~~~~~~~~~ 232 (538)
.|||+.. .+....++.+...+ +.++++|..-
T Consensus 225 ~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~ 259 (528)
T KOG0253|consen 225 SNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLA 259 (528)
T ss_pred HhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhh
Confidence 7888864 34444555544443 3478877543
No 148
>PRK10504 putative transporter; Provisional
Probab=98.56 E-value=3.2e-06 Score=91.16 Aligned_cols=148 Identities=11% Similarity=0.057 Sum_probs=112.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
+.+...+...++..+++.......+.|++..+ |.+..+++.+.........++.++.|+++||+ |||+++.++..+..
T Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-g~~~~~~~~~~~~~ 338 (471)
T PRK10504 261 RTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGL-GFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-GYRRVLVATTLGLA 338 (471)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHH
Confidence 55666677777888887666566777887778 99999999998888888888889999999995 99999999999888
Q ss_pred HhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHH
Q 009308 116 LGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSV 195 (538)
Q Consensus 116 ~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~ 195 (538)
++..++...... .....+.+..++.|+|.|...+...++..+..|+ + .+...++++....++|.
T Consensus 339 ~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------~---~~g~~~~~~~~~~~~g~ 402 (471)
T PRK10504 339 LVSLLFMLVALL-----GWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPD--------N---LASSGNSLLSMIMQLSM 402 (471)
T ss_pred HHHHHHHhcccc-----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH--------H---hccchHHHHHHHHHHHH
Confidence 876665543211 1233345567778889998888888888888765 1 34556777788888888
Q ss_pred HHHHHh
Q 009308 196 IASVQL 201 (538)
Q Consensus 196 ~i~~~~ 201 (538)
.+|+.+
T Consensus 403 ~ig~~i 408 (471)
T PRK10504 403 SIGVTI 408 (471)
T ss_pred HHHHHH
Confidence 888766
No 149
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.56 E-value=1.8e-06 Score=93.97 Aligned_cols=172 Identities=12% Similarity=0.023 Sum_probs=113.5
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHH-HHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHH
Q 009308 38 ALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQ-EGISASTVIFLTCIPDAFSGRLNVIFYSTISCIL 116 (538)
Q Consensus 38 ~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~-~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~ 116 (538)
.|.++...++-.++.++.....++|+.+.+ |++.++++.+.... .....++.+++|+++||+ ||||.+.++.++..+
T Consensus 224 ~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~-G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~-g~~~~l~i~~~l~~l 301 (491)
T PRK11010 224 AWLILLLIVLYKLGDAFAMSLTTTFLIRGV-GFDAGEVGLVNKTLGLLATIVGALYGGILMQRL-SLFRALMIFGILQGV 301 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHH
Confidence 344444456666777767777888887789 99999999987544 568889999999999995 999988877766555
Q ss_pred hHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHH
Q 009308 117 GLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVI 196 (538)
Q Consensus 117 G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~ 196 (538)
+.+++....... .+...+.+..++..++.|...+...++..+..++ .. ....++..+...++|..
T Consensus 302 ~~l~~~~l~~~~----~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~-----~~------~~t~~gl~~s~~~lg~~ 366 (491)
T PRK11010 302 SNAGYWLLSITD----KNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNK-----SF------SATQFALLSALSAVGRV 366 (491)
T ss_pred HHHHHHHHHhcc----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-----CC------cHHHHHHHHHHHHHHHH
Confidence 443332211100 1233344455565555565556667777777765 11 12335666666777776
Q ss_pred HHHHh-------hhhhHHHHHHHHHHHHHHHHHHhcc
Q 009308 197 ASVQL-------SSWRVISTFTVSATGITLFIFRLGI 226 (538)
Q Consensus 197 i~~~~-------~g~~~~F~i~~~~~~l~~~~~~~~~ 226 (538)
+++.+ .||+..|.+.+++.+++++.....+
T Consensus 367 ~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 367 YVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 55433 6899999888887777766655443
No 150
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.56 E-value=0.00012 Score=79.35 Aligned_cols=77 Identities=13% Similarity=0.213 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHhhhhHHHHHhhCCcchhhHHHHHHHHHHHHHHHHHHHhhh-cccccccccCCCcchhHHHHHHHHHHHH
Q 009308 419 FCLLGLMKGLARDGINKFLADQFPEPMHDCVSAITELVTGFASFVNIVSVY-FNKSLFADTLNSSRLDEYYKMLTIVSFI 497 (538)
Q Consensus 419 ~~l~glgE~l~~p~~~~~~~~~aP~~~rg~~~gl~~l~~~iG~~l~~~l~~-~~~~~~~~~~n~~~l~~~f~~la~l~~v 497 (538)
-++.|+.-+-..+..=++..+..|+++.+...|+|.++.=..+.+||++.+ +.+ + .++.+.. +..+.++.++
T Consensus 387 a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~-~----tg~~r~g--~~~l~~lf~~ 459 (477)
T PF11700_consen 387 AVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITD-A----TGSQRYG--FLFLLVLFLI 459 (477)
T ss_pred HHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH-H----hCCchhH--HHHHHHHHHH
Confidence 368899999999999999999999999999999999999999999999999 443 1 1111222 4445555555
Q ss_pred HHHHH
Q 009308 498 NICYF 502 (538)
Q Consensus 498 ~~~~~ 502 (538)
.++++
T Consensus 460 gl~ll 464 (477)
T PF11700_consen 460 GLILL 464 (477)
T ss_pred HHHHH
Confidence 55554
No 151
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.53 E-value=1.1e-06 Score=90.36 Aligned_cols=149 Identities=14% Similarity=0.035 Sum_probs=116.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhH-HHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVV-AVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISC 114 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~-~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~ 114 (538)
+.++.+....++..+.+.+.. ..++.|.++.+ |.+..+++.+...+.....++.++.|++.||+ ||++.+..+..+.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~ 287 (365)
T TIGR00900 210 PLLRTLLLLALLFNLVFAPAIVALFPYVQSKYL-GRGSTHYGWVLAAFGLGALLGALLLGLLGRYF-KRMALMTGAIFVI 287 (365)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHH
Confidence 445555566666777777676 55666666668 99999999999999999999999999999995 9999998887777
Q ss_pred HHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHH
Q 009308 115 ILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFS 194 (538)
Q Consensus 115 ~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG 194 (538)
.++..++..... +.+.+++..++.|++.+...+...++..|..|+ +.+.+.++.+....++|
T Consensus 288 ~~~~~~~~~~~~-------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----------~~~g~~~~~~~~~~~~~ 349 (365)
T TIGR00900 288 GLAILVVGLTPP-------NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPA-----------ELLGRVFGAQFSLSHAA 349 (365)
T ss_pred HHHHHHHHhhch-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-----------HHHHHHHHHHHHHHHHH
Confidence 776665554421 255677888899999999999999999999876 23456677888888899
Q ss_pred HHHHHHhhhh
Q 009308 195 VIASVQLSSW 204 (538)
Q Consensus 195 ~~i~~~~~g~ 204 (538)
..+++.+.|+
T Consensus 350 ~~~g~~~~g~ 359 (365)
T TIGR00900 350 WPLGLILAGP 359 (365)
T ss_pred HHHHHHHHHH
Confidence 8888876443
No 152
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.53 E-value=2e-06 Score=92.03 Aligned_cols=170 Identities=12% Similarity=0.024 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCc--hHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGR--LNVIFYSTIS 113 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr--~~~i~~~~~~ 113 (538)
+.+|.+....++..+.++++...++.|+++.+ |++..+++...+.+.....++.+++|+++||+.+| ++......+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~-g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~ 321 (434)
T PRK11663 243 PYIWLLSFSYVLVYVVRAAINDWGNLYMSETL-GVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAG 321 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHH
Confidence 44566666666667777788888999998889 99999999999999999999999999999996322 2222222212
Q ss_pred HHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHH
Q 009308 114 CILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFF 193 (538)
Q Consensus 114 ~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~ni 193 (538)
..++.+.+..... .+.....+..+..|++............+|.+++ + .+....++.+...++
T Consensus 322 ~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------~---~~g~~~g~~~~~~~~ 384 (434)
T PRK11663 322 ILLSVGSLWLMPF------ASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHK--------E---AAGAATGFVGLFAYL 384 (434)
T ss_pred HHHHHHHHHHccc------ccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccH--------h---hHHhHHHHHHHHHHH
Confidence 1212111111111 0122222223333332222222234456676654 2 345566777778889
Q ss_pred HHHHHHHh-------hhhhHHHHHHHHHHHHHHHHHH
Q 009308 194 SVIASVQL-------SSWRVISTFTVSATGITLFIFR 223 (538)
Q Consensus 194 G~~i~~~~-------~g~~~~F~i~~~~~~l~~~~~~ 223 (538)
|..+++.+ .||...|.+.+++.+++.+..+
T Consensus 385 g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 421 (434)
T PRK11663 385 GAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLL 421 (434)
T ss_pred HHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 99888765 6788888877776665555444
No 153
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.52 E-value=5.1e-06 Score=88.73 Aligned_cols=162 Identities=10% Similarity=-0.028 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHH
Q 009308 42 LGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLL 121 (538)
Q Consensus 42 ~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll 121 (538)
++..++..+.+|++...++.|+++.+ |.+..+++...........++.+++|+++||+ |||+++.++.++..+....+
T Consensus 249 ~~~~~~~~~~~~~~~~~lp~~l~~~~-g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~ 326 (432)
T PRK10406 249 LGFTAAGSLCFYTFTTYMQKYLVNTA-GMHANVASGIMTAALFVFMLIQPLIGALSDKI-GRRTSMLCFGSLAALFTVPI 326 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHHHH
Confidence 33344456788889999999998889 99999999888887777788888999999995 99998877766544332211
Q ss_pred Hh-hhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHH-HHHHHH
Q 009308 122 FI-TAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFF-SVIASV 199 (538)
Q Consensus 122 ~~-~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~ni-G~~i~~ 199 (538)
.. ..... +....+....+...+.+...+...++.+|.+|+ +.|...+++.|...|+ +...++
T Consensus 327 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~-----------~~r~t~~g~~~~~g~~~~g~~~p 390 (432)
T PRK10406 327 LSALQNVS-----SPYAAFGLVMCALLIVSFYTSISGILKAEMFPA-----------QVRALGVGLSYAVANALFGGSAE 390 (432)
T ss_pred HHHHHcCC-----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----------CccchhhhHHHHHHHHHHHhHHH
Confidence 11 11000 111111222222233344445567888999987 2345566665543332 122233
Q ss_pred Hh------hh-hhHHHHHHHHHHHHHHHH
Q 009308 200 QL------SS-WRVISTFTVSATGITLFI 221 (538)
Q Consensus 200 ~~------~g-~~~~F~i~~~~~~l~~~~ 221 (538)
.+ .| |...+.+.++..+++.+.
T Consensus 391 ~~~~~l~~~g~~~~~~~~~~~~~~i~~~~ 419 (432)
T PRK10406 391 YVALSLKSIGMETAFFWYVTLMAVVAFLV 419 (432)
T ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHHHHH
Confidence 32 33 555555554445444443
No 154
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.52 E-value=1.6e-06 Score=92.26 Aligned_cols=148 Identities=9% Similarity=0.014 Sum_probs=98.1
Q ss_pred HHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhcccccc---chhHHH
Q 009308 61 TYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAAS---PLLKRL 137 (538)
Q Consensus 61 ~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~---~~~~~~ 137 (538)
++..+.. |++..+++.....+.....++.+++|+++||+ |||+.+.++.++..++.+++.+........ ......
T Consensus 308 ~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (481)
T TIGR00879 308 PTIFENA-GVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF-GRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVA 385 (481)
T ss_pred HHHHHHc-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHH
Confidence 4444568 88888888888899999999999999999995 999999999888888776665322111100 001222
Q ss_pred HHHH-HHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-------hhhhHHHH
Q 009308 138 ILIG-VVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL-------SSWRVIST 209 (538)
Q Consensus 138 ~~~~-l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~-------~g~~~~F~ 209 (538)
+... .+..+.+.+ ..+....+.+|.+|+ + .+...........++|.++++.+ .+|++.|+
T Consensus 386 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~--------~---~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~ 453 (481)
T TIGR00879 386 IVFILLFIAFFAMG-WGPVPWVIVSEIFPL--------S---LRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFI 453 (481)
T ss_pred HHHHHHHHHHHHcc-ccCeehhhhhccCCh--------H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceeh
Confidence 2222 222223322 447777788999876 2 23455666777888888888765 47888887
Q ss_pred HHHHHHHHHHHHH
Q 009308 210 FTVSATGITLFIF 222 (538)
Q Consensus 210 i~~~~~~l~~~~~ 222 (538)
+.+++.+++.++.
T Consensus 454 ~~~~~~~~~~i~~ 466 (481)
T TIGR00879 454 FFGGLNVLGLIFV 466 (481)
T ss_pred hHHHHHHHHHHHH
Confidence 7666665555443
No 155
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.51 E-value=4.5e-06 Score=88.19 Aligned_cols=148 Identities=12% Similarity=-0.049 Sum_probs=105.5
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHH
Q 009308 37 AALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCIL 116 (538)
Q Consensus 37 ~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~ 116 (538)
.++.+.....+..+.++++....+.|+.+.+ |.+..+.+.......++..++.++.|+++||+ ||++.+.++.++..+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~ 293 (406)
T PRK15402 216 RFVAGALALGLVSLPLLAWIALSPVILISGE-QLSSYEYGLLQVPVFGALIAGNLTLARLTSRR-PLRSLIRMGLWPMVA 293 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHH
Confidence 3444444444555666666666778888888 99999999887777777888999999999995 999999999998888
Q ss_pred hHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHH
Q 009308 117 GLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVI 196 (538)
Q Consensus 117 G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~ 196 (538)
|.+++....... ..+...++++.++.++|.+...+.......+..+ + ++.+..+.+++..++|..
T Consensus 294 g~~~~~~~~~~~---~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~---------~---~~g~~~~~~~~~~~~~~~ 358 (406)
T PRK15402 294 GLLLAALATVIS---SHAYLWLTAGLSLYAFGIGLANAGLYRLTLFSSD---------V---SKGTVSAAMGMLSMLIFT 358 (406)
T ss_pred HHHHHHHHHHcc---cccHHHHHHHHHHHHHHHHHHhhhHHHHHhhhcc---------c---cccHHHHHHHHHHHHHHH
Confidence 887776543111 0134556788889999999888777665543321 1 344555666667777777
Q ss_pred HHHHh
Q 009308 197 ASVQL 201 (538)
Q Consensus 197 i~~~~ 201 (538)
+|+.+
T Consensus 359 ~g~~~ 363 (406)
T PRK15402 359 VGIEL 363 (406)
T ss_pred HHHHH
Confidence 77665
No 156
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.51 E-value=1.4e-06 Score=93.00 Aligned_cols=154 Identities=18% Similarity=0.065 Sum_probs=122.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHH
Q 009308 35 CKAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISC 114 (538)
Q Consensus 35 ~~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~ 114 (538)
.|.+..++...++..+++....+.+..|.+..+ +.+ ...+.+.......+.++.++.++++||+ ||||++..+.+++
T Consensus 224 nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl-~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~-gk~~~~~~~~~~~ 300 (428)
T PF13347_consen 224 NRPFRILLLAFFLQWLAFALMNTFLPYYFTYVL-GNE-GLISIFMLIFFVASIVGSPLWGRLSKRF-GKKKVYIIGLLLA 300 (428)
T ss_pred cchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHh-cCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHc-cceeehhhhHHHH
Confidence 367777888899999999888888888888777 665 5667777788888999999999999995 9999999999999
Q ss_pred HHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHH
Q 009308 115 ILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFS 194 (538)
Q Consensus 115 ~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG 194 (538)
+++.+++.+... .+.+.+++...+.|+|.|...+...++.+|..+..+.+ .+ +++-+..++.+.+...+|
T Consensus 301 ~~~~~~~~~~~~------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~---tg-~r~~g~~~s~~~~~~k~~ 370 (428)
T PF13347_consen 301 ALGFLLLFFLGP------GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWK---TG-RRREGMYFSVNSFFIKIG 370 (428)
T ss_pred HHHHHHHHHHHh------hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHh---cC-CCchHHHHHhhhhhhHHH
Confidence 999988776641 14778889999999999999999999999998751000 01 122344567777888888
Q ss_pred HHHHHHh
Q 009308 195 VIASVQL 201 (538)
Q Consensus 195 ~~i~~~~ 201 (538)
..++..+
T Consensus 371 ~~la~~i 377 (428)
T PF13347_consen 371 QGLAGAI 377 (428)
T ss_pred HHHHHHH
Confidence 8888765
No 157
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.50 E-value=1.5e-06 Score=94.66 Aligned_cols=149 Identities=10% Similarity=-0.046 Sum_probs=115.9
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHh
Q 009308 38 ALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILG 117 (538)
Q Consensus 38 ~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G 117 (538)
+.......++..+++++....++.|+++.. |++..+++.....+.....++.+++|++.||+ |||+.+..+.++..+|
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~-g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~g~~~~~~~ 338 (495)
T PRK14995 261 ILSGVVMAMTAMITLVGFELLMAQELQFVH-GLSPLEAGMFMLPVMVASGFSGPIAGILVSRL-GLRLVATGGMALSALS 338 (495)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHH
Confidence 344445566666778888888899999889 99999999999999999999999999999995 9999999999888888
Q ss_pred HHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHH
Q 009308 118 LVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIA 197 (538)
Q Consensus 118 ~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i 197 (538)
.+++...... .+.+......++.|+|.|...+.......+..|+ +++....+.+....++|..+
T Consensus 339 ~~~l~~~~~~-----~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~-----------~~~g~~~~~~~~~~~lG~~~ 402 (495)
T PRK14995 339 FYGLAMTDFS-----TQQWQAWGLMALLGFSAASALLASTSAIMAAAPP-----------EKAAAAGAIETMAYELGAGL 402 (495)
T ss_pred HHHHHHhcCC-----CchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCH-----------HhcchHHHHHHHHHHHHHHH
Confidence 7766543211 1233456678889999999988888888887765 13345557777788999988
Q ss_pred HHHhhhh
Q 009308 198 SVQLSSW 204 (538)
Q Consensus 198 ~~~~~g~ 204 (538)
|..+.|.
T Consensus 403 G~ai~g~ 409 (495)
T PRK14995 403 GIAIFGL 409 (495)
T ss_pred HHHHHHH
Confidence 8876443
No 158
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.49 E-value=3.1e-06 Score=88.78 Aligned_cols=164 Identities=10% Similarity=0.067 Sum_probs=104.1
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHh
Q 009308 38 ALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILG 117 (538)
Q Consensus 38 ~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G 117 (538)
.|.++...++-..+.+.+...+++|+++.. |++..+++.+.........++.++.|++.||+ |+++.+.++..+..++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~-~~~~~~~~~~~~~~i~ 278 (382)
T PRK10091 201 PWLIFAATMFGNAGVFAWFSYIKPYMMFIS-GFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY-SPLRIAAVTDFIIVLA 278 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHhHHHheecccc-CchhHHHHHHHHHHHH
Confidence 344444344444555556666778888778 99999999999999999999999999999995 9999999999888888
Q ss_pred HHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHH
Q 009308 118 LVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIA 197 (538)
Q Consensus 118 ~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i 197 (538)
.+++..... +.+...+..++.+.|.++..+.......+..++ ++. .... ......++|..+
T Consensus 279 ~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--------~~~--~~~~--~~~~~~~~g~~~ 339 (382)
T PRK10091 279 LLMLFFFGG-------MKTASLIFAFICCAGLFALSAPLQILLLQNAKG--------GEL--LGAA--GGQIAFNLGSAI 339 (382)
T ss_pred HHHHHHHHh-------hHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCc--------chH--HHHH--HHHHHHHHHHHH
Confidence 765543221 223444455555666555444334333333221 111 1111 123345566666
Q ss_pred HHHh--------hhhhHHHHHHHHHHHHHHHHH
Q 009308 198 SVQL--------SSWRVISTFTVSATGITLFIF 222 (538)
Q Consensus 198 ~~~~--------~g~~~~F~i~~~~~~l~~~~~ 222 (538)
|+.+ .+|+..|.+.++...+....+
T Consensus 340 Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (382)
T PRK10091 340 GAYCGGMMLTLGLAYNYVALPAALLSFAAMSSL 372 (382)
T ss_pred HHHHhHHHHHcccCcchHHHHHHHHHHHHHHHH
Confidence 6654 478888887766665555443
No 159
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.48 E-value=1.7e-06 Score=89.45 Aligned_cols=175 Identities=14% Similarity=-0.076 Sum_probs=115.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHH
Q 009308 35 CKAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISC 114 (538)
Q Consensus 35 ~~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~ 114 (538)
.+..|.+...-+...=+|.|....++.|+++.+ +.++.+|+.+...+.....+..++||+|+||+ |.+|.+.+....+
T Consensus 217 ~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~f-g~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-Gg~rv~~~~f~~~ 294 (417)
T COG2223 217 NKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQF-GLSPVTAGLIAFLFPLIGALARPLGGWLSDRI-GGRRVTLAVFVGM 294 (417)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCChhhHHHHHHHHHHHHHHHHhccchhhhhc-cchhHHHHHHHHH
Confidence 466677777777888889999999999999999 99999999999999999999999999999996 8888888888888
Q ss_pred HHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHH
Q 009308 115 ILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFS 194 (538)
Q Consensus 115 ~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG 194 (538)
+++..++......... ..+...++...+.+.+..|.-+-.+..++...+++ + ....-.+-...-++|
T Consensus 295 ~~~~~~l~~~~~~~~~-~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~---------~---~G~v~G~vga~G~lG 361 (417)
T COG2223 295 ALAAALLSLFLTGFGH-GGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK---------E---TGAVTGIVGAIGGLG 361 (417)
T ss_pred HHHHHHHHcccccccc-CcchHHHHHHHHHHHHHhccCcchheeechHHHHh---------h---hhHHHHHHHHhcccc
Confidence 8877776654311000 01122333333333333333344555555555543 1 112223333344455
Q ss_pred HHHHHHh--------hhhhHHHHHHHHHHHHHHHHHHh
Q 009308 195 VIASVQL--------SSWRVISTFTVSATGITLFIFRL 224 (538)
Q Consensus 195 ~~i~~~~--------~g~~~~F~i~~~~~~l~~~~~~~ 224 (538)
.+.-|.. -++...|++.....+++.+....
T Consensus 362 Gf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~ 399 (417)
T COG2223 362 GFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWA 399 (417)
T ss_pred ccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 4333332 24777788777766666664443
No 160
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.48 E-value=1.6e-06 Score=93.45 Aligned_cols=149 Identities=12% Similarity=-0.040 Sum_probs=115.4
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHh
Q 009308 38 ALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILG 117 (538)
Q Consensus 38 ~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G 117 (538)
++......++..+++++....++.|+++.+ |++..+++...........++.+++|++.||+ |||+.+.++..+..++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~g~~~~~~~ 334 (485)
T TIGR00711 257 FTIGCVYMSLLGLGLYGSFYLLPLYLQQVL-GYTALQAGLHILPVGLAPMLSSPIAGRMGDKI-DPRKLVTIGLILYAVG 334 (485)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcHHHHHHHHHHHHHH
Confidence 344455566667788888888999999989 99999999999999999999999999999995 9999999999988888
Q ss_pred HHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHH
Q 009308 118 LVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIA 197 (538)
Q Consensus 118 ~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i 197 (538)
..++.....+. .+...+....++.|+|.|...+.......+..|+ +++....+.+....++|..+
T Consensus 335 ~~~~~~~~~~~----~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~-----------~~~g~~~~~~~~~~~~g~~i 399 (485)
T TIGR00711 335 FYWRAFTFTPD----TPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPP-----------HKIARGSSLSNFTRQLGGSI 399 (485)
T ss_pred HHHHhccCCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH-----------HHHhHHHHHHHHHHHHHHHH
Confidence 87766321111 1344566678889999999887777777777664 23456667777788899888
Q ss_pred HHHhhh
Q 009308 198 SVQLSS 203 (538)
Q Consensus 198 ~~~~~g 203 (538)
|+.+.|
T Consensus 400 g~~i~g 405 (485)
T TIGR00711 400 GTALIT 405 (485)
T ss_pred HHHHHH
Confidence 887633
No 161
>PRK15075 citrate-proton symporter; Provisional
Probab=98.48 E-value=7.6e-06 Score=87.49 Aligned_cols=116 Identities=12% Similarity=-0.014 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHH-HH
Q 009308 43 GLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLV-LL 121 (538)
Q Consensus 43 ~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~-ll 121 (538)
...++...+++++...++.|+++.+ |++..+++.....+.....++.+++|+++||+ |||+.+..+..+..+... .+
T Consensus 245 ~~~~~~~~~~~~~~~~~p~~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~ 322 (434)
T PRK15075 245 LMVAMTTVSFYLITVYTPTFGKTVL-HLSAADSLLVTLCVGVSNFIWLPIGGALSDRI-GRRPVLIAFTVLAILTAYPAL 322 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHH
Confidence 3344566778888888999999889 99999999888888888899999999999995 999988876555433211 11
Q ss_pred H-hhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccc
Q 009308 122 F-ITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRA 166 (538)
Q Consensus 122 ~-~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~ 166 (538)
. .... .......+..++.+++.|...+...++..|.+|+
T Consensus 323 ~~~~~~------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~ 362 (434)
T PRK15075 323 SWLVAA------PSFARMLAVELWLSFLYGSYNGAMVVALTEVMPA 362 (434)
T ss_pred HHHHcC------CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCC
Confidence 1 1111 1222344445566777777777777889999876
No 162
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.48 E-value=5.8e-06 Score=89.18 Aligned_cols=142 Identities=8% Similarity=-0.016 Sum_probs=94.5
Q ss_pred HhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHHHHHHH
Q 009308 62 YLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKRLILIG 141 (538)
Q Consensus 62 yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~ 141 (538)
++.+.+ |.+...++...........++.+++|+++||+ |||+.+..+.++.+++.+++......+ ........+
T Consensus 296 ~i~~~~-g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~i~~~~~~~v~~~~l~~~~~~~----~~~~~~~~~ 369 (479)
T PRK10077 296 EIFKTL-GASTDIALLQTIIVGVINLTFTVLAIMTVDKF-GRKPLQIIGALGMAIGMFSLGTAFYTQ----APGIVALLS 369 (479)
T ss_pred HHHHHc-CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHhHHHHHHHHHHHHHHHhcC----cccHHHHHH
Confidence 344458 88877777777777778889999999999995 999999999999999887776432111 011233344
Q ss_pred HHHHHHhchh-hcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-------------hhhhHH
Q 009308 142 VVLLAVGKAG-MQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL-------------SSWRVI 207 (538)
Q Consensus 142 l~l~g~g~g~-~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~-------------~g~~~~ 207 (538)
.++.+.+.+. ..|+..++..|.+|+ + .|....++.+...++|..+++.+ .+|+..
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~e~~p~--------~---~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~ 438 (479)
T PRK10077 370 MLFYVAAFAMSWGPVCWVLLSEIFPN--------A---IRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFS 438 (479)
T ss_pred HHHHHHHHhccccchhHHHhHhhCCh--------h---HHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccH
Confidence 4555555543 347788999999876 2 34556666666667777666332 356667
Q ss_pred HHHHHHHHHHHHH
Q 009308 208 STFTVSATGITLF 220 (538)
Q Consensus 208 F~i~~~~~~l~~~ 220 (538)
|.+.++..+++.+
T Consensus 439 ~~~~~~~~~~~~~ 451 (479)
T PRK10077 439 YWIYGCMGVLAAL 451 (479)
T ss_pred HHHHHHHHHHHHH
Confidence 7665554444443
No 163
>TIGR00895 2A0115 benzoate transport.
Probab=98.48 E-value=2e-06 Score=89.50 Aligned_cols=146 Identities=14% Similarity=0.025 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHH
Q 009308 37 AALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCIL 116 (538)
Q Consensus 37 ~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~ 116 (538)
..+.++...++..++++++...++ ++.+.+ |.+..+++.+.........++.+++|+++||+ |||+.+........+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~ 327 (398)
T TIGR00895 251 ITVLLWLLYFMLLVGVYFLTNWLP-KLMVEL-GFSLSLAATGGALFNFGGVIGSIIFGWLADRL-GPRVTALLLLLGAVF 327 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHHHHHH
Confidence 344445555666677777776666 555668 99999999999999999999999999999995 998555444444333
Q ss_pred hHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHH
Q 009308 117 GLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVI 196 (538)
Q Consensus 117 G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~ 196 (538)
+.++..... +....++..++.|++.++..+...++.+|.+|+ + .+...++++....++|..
T Consensus 328 ~~~~~~~~~--------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------~---~~g~~~g~~~~~~~~g~~ 388 (398)
T TIGR00895 328 AVLVGSTLF--------SPTLLLLLGAIAGFFVNGGQSGLYALMALFYPT--------A---IRATGVGWAIGIGRLGAI 388 (398)
T ss_pred HHHHHHHhh--------CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCH--------H---HHHHHHHHHHHHHHHHHH
Confidence 333322121 344567778889999999999999999999876 2 345667777888889999
Q ss_pred HHHHhhhh
Q 009308 197 ASVQLSSW 204 (538)
Q Consensus 197 i~~~~~g~ 204 (538)
+++.+.|+
T Consensus 389 ~g~~~~G~ 396 (398)
T TIGR00895 389 IGPILAGY 396 (398)
T ss_pred HHHHhHHh
Confidence 98876554
No 164
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.48 E-value=1.3e-06 Score=90.32 Aligned_cols=126 Identities=19% Similarity=0.081 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHH-HHHHHHHHHhhhhhhccCCchHHHHHHHHHHHH
Q 009308 38 ALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQE-GISASTVIFLTCIPDAFSGRLNVIFYSTISCIL 116 (538)
Q Consensus 38 ~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~-~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~ 116 (538)
.+.++...++..+++++....++.|+++ + |++.++++.+.+... ....++.+++|++.||+ |||+.+.++.++..+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~-g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~ 287 (356)
T TIGR00901 211 ALLLLLLIVLYKLGDSAATVLTTLFLLD-M-GFSKEEIALVAKINGLLGAILGGLIGGIIMQPL-NILYALLLFGIVQAL 287 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-c-CCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHH
Confidence 6666667777889999999999999987 9 999999998888766 46678899999999995 999999999988888
Q ss_pred hHHHHHhhh-ccccc--cchhHHHHHHHHHHHHHhchhhcccchhhhhccccc
Q 009308 117 GLVLLFITA-FEEAA--SPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRA 166 (538)
Q Consensus 117 G~~ll~~~~-~~~~~--~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~ 166 (538)
+..++.... ..... ...+.+.+....++.+++.+...+...++..+.+|+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~ 340 (356)
T TIGR00901 288 TNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNP 340 (356)
T ss_pred HHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCC
Confidence 766554431 11000 001245567778888999999999999999999887
No 165
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.47 E-value=3.4e-06 Score=101.08 Aligned_cols=144 Identities=8% Similarity=-0.015 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChH-HHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 37 AALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVV-EAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 37 ~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~-~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
.++.++...++-.+..+.....++.|+.+.+ |.+.. +++++......+..++.++.|+++||+ ++++.+.++.++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~ 310 (1146)
T PRK08633 233 VLWLAIIGLSYFWFISQLAQANFPAYAKEVL-GLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-IELGLVPLGALGLA 310 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eEccchhHHHHHHH
Confidence 3444444444444555567778888998889 99998 999999999999999999999999995 99999988888888
Q ss_pred HhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHH
Q 009308 116 LGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSV 195 (538)
Q Consensus 116 ~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~ 195 (538)
++.+++.... +.+.++++.++.|++.|+..+...+++.+..|+ ..+.++++.+.+..++|.
T Consensus 311 ~~~~~~~~~~--------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~-----------~~rg~~~~~~~~~~~lg~ 371 (1146)
T PRK08633 311 LSLFLLPTAP--------SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPE-----------KELGKVLAANNFLQNVGM 371 (1146)
T ss_pred HHHHHHHHhh--------hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCc-----------cchhhhhHHHHHHHHHHH
Confidence 8777666543 355677788899999999999999999988775 234566777777777777
Q ss_pred HHHHHh
Q 009308 196 IASVQL 201 (538)
Q Consensus 196 ~i~~~~ 201 (538)
++++.+
T Consensus 372 ~~~~~~ 377 (1146)
T PRK08633 372 LLFLAL 377 (1146)
T ss_pred HHHHHH
Confidence 665443
No 166
>PRK09848 glucuronide transporter; Provisional
Probab=98.45 E-value=3.3e-06 Score=90.66 Aligned_cols=154 Identities=11% Similarity=0.083 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
|.+.......++..+++.......+.|+++.+ |.+....+...........++.++.++++||+ |+|+++.++.++..
T Consensus 228 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~-g~~~~~~~g~~~~~ 305 (448)
T PRK09848 228 RPLFMLCIGALCVLISTFAVSASSLFYVRYVL-NDTGLFTVLVLVQNLVGTVASAPLVPGMVARI-GKKNTFLIGALLGT 305 (448)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhheeeEeeec-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHH
Confidence 55666666777777777777777777888888 87766655544444555677889999999995 99999999999999
Q ss_pred HhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHH
Q 009308 116 LGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSV 195 (538)
Q Consensus 116 ~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~ 195 (538)
+|.+++.+... .+.+.+++..++.++|.+...+...++.+|..|.++. ..++ ++...+++.+.++..+|.
T Consensus 306 i~~~~~~~~~~------~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~---~~g~-r~~G~~~~~~~~~~klg~ 375 (448)
T PRK09848 306 CGYLLFFWVSV------WSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEY---LTGV-RIEGLTYSLFSFTRKCGQ 375 (448)
T ss_pred HHHHHHHHcCc------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHH---hhCc-cchhHHHHHHHHHHHHHH
Confidence 98877765321 1355667778889999999999999999998765100 0011 123445577788888888
Q ss_pred HHHHHh
Q 009308 196 IASVQL 201 (538)
Q Consensus 196 ~i~~~~ 201 (538)
.+|+.+
T Consensus 376 aig~~i 381 (448)
T PRK09848 376 AIGGSI 381 (448)
T ss_pred HHHHHH
Confidence 888665
No 167
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.43 E-value=6.7e-06 Score=86.24 Aligned_cols=117 Identities=11% Similarity=0.030 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
+.++.+....++-..++.+....++.|+++ . |.+..+++...+.......+..++.|++.||+ |+++.+.++.+...
T Consensus 205 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~-g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~l~~~~~~~~ 281 (382)
T PRK11128 205 PTVWRFLLCVSLLQGSHAAYYGFSAIYWQA-A-GYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW-SARDLLLLSAICGV 281 (382)
T ss_pred hhHHHHHHHHHHHHHHhHhHHHHHHHHHHH-C-CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHH
Confidence 455555555666667777777888889965 8 99999999998888888888889999999995 99999999999988
Q ss_pred HhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhcc
Q 009308 116 LGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQ 163 (538)
Q Consensus 116 ~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~ 163 (538)
++.+++.... +.+.+++..++.|++.+...+....+..++
T Consensus 282 ~~~~~~~~~~--------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 321 (382)
T PRK11128 282 VRWGLMGSTT--------ALPWLIVIQILHCGTFTVCHLAAMRYIAAR 321 (382)
T ss_pred HHHHHHHhhh--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 8877665543 456778889999999999888888887776
No 168
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.42 E-value=4.8e-06 Score=89.15 Aligned_cols=169 Identities=9% Similarity=0.046 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
+.+|.+....++....++++...++.|+++.. |++..+++.....+.....++.+++|+++||+ |+++....+..+..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~-g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~ 328 (438)
T TIGR00712 251 KLLWYIAIANVFVYLLRYGVLDWSPTYLKEVK-HFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FKGNRGATGVFFMT 328 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhHHHHHHHcc-CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccHHHHHHHH
Confidence 44566666666766778889899999999888 99999999999999999999999999999995 65443333333222
Q ss_pred H---hHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHH
Q 009308 116 L---GLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFF 192 (538)
Q Consensus 116 ~---G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~n 192 (538)
+ +.+++..... .+.....+..++.|.+..+..........|.+|+ + .+....+++....+
T Consensus 329 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------~---~~g~~~g~~~~~~~ 391 (438)
T TIGR00712 329 LVTIAVIVYWMNPA------GNPLVDMICMIVIGFLIYGPVMLIGLHALELAPK--------K---AAGTAAGFTGLFGY 391 (438)
T ss_pred HHHHHHHHHHhcCC------CchHHHHHHHHHHHHHHccHHHHHHHHHHHhcCh--------h---heeeehhhhchHHH
Confidence 2 2222121110 0122233334444443322222223456677765 2 34455555555556
Q ss_pred HHH-HHHHHh-------hhhhHHHHHHHHHHHHHHHHHH
Q 009308 193 FSV-IASVQL-------SSWRVISTFTVSATGITLFIFR 223 (538)
Q Consensus 193 iG~-~i~~~~-------~g~~~~F~i~~~~~~l~~~~~~ 223 (538)
+|. ++++.+ .||...|.+.++..+++.+..+
T Consensus 392 ~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 430 (438)
T TIGR00712 392 LGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLI 430 (438)
T ss_pred hhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 653 455543 5788888776665555555433
No 169
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.42 E-value=6.6e-06 Score=84.09 Aligned_cols=154 Identities=12% Similarity=0.005 Sum_probs=108.6
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhcc--cCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 38 ALILLGLIFSHKLVDIAVVAVLITYLTD--YPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 38 ~~~l~~~~~~er~~~~g~~~~l~~yl~~--~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
.++.....++--.+-.++...++.|+.+ .+ |++..+++...+.+.+...++.++++++.|| +|++|++.++..+.+
T Consensus 142 ~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~-g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r-~g~~~~l~~~~~l~~ 219 (310)
T TIGR01272 142 LVLGALGIFVYVGAEVSAGSFLVNFLSDPHAL-GLPEDQAAHFTAYTWGGAMVGRFIGSAVMPM-ISQGRYLAFNAFLAV 219 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHH
Confidence 3333334444333445666678999975 48 9999999999999999999999999999999 499999999988888
Q ss_pred HhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHH
Q 009308 116 LGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSV 195 (538)
Q Consensus 116 ~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~ 195 (538)
++.+++.... +. ....+..+.|++.+.+.|+..+...+.++++ . ...+ .. .....+|.
T Consensus 220 ~~~~l~~~~~--------~~-~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~------~----~~as--ai-~~~~~~Gg 277 (310)
T TIGR01272 220 LLSIGAALTH--------GY-VAMWFVLALGLFNSIMFPTIFSLALNALGRH------T----SQGS--GI-LCLAIVGG 277 (310)
T ss_pred HHHHHHHHcC--------CH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh------h----hhhH--HH-HHHHHhcc
Confidence 8775554432 11 2234666899999999999999999987651 1 1122 22 24556788
Q ss_pred HHHHHh-------hhhhHHHHHHHHHH
Q 009308 196 IASVQL-------SSWRVISTFTVSAT 215 (538)
Q Consensus 196 ~i~~~~-------~g~~~~F~i~~~~~ 215 (538)
++.|.+ .|.+.+|.++.++.
T Consensus 278 ~i~P~l~G~lad~~g~~~a~~v~~~~~ 304 (310)
T TIGR01272 278 AIVPLLQGSLADCLGIQLAFALPVPCY 304 (310)
T ss_pred hHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 888765 46666666544443
No 170
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.40 E-value=1e-05 Score=84.06 Aligned_cols=123 Identities=11% Similarity=-0.052 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHh
Q 009308 38 ALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILG 117 (538)
Q Consensus 38 ~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G 117 (538)
.+.......+-...+++.....+.|+++.+ |.++.+++.+.........++.+++|++.||+ |||+.+..+..+..++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~ 285 (385)
T TIGR00710 208 FWGYALIYGASFGGFFAFFSGAPFVYIDIM-GVSPSVFGLLFALNIIAMIFGGFLNGRFIKKW-GAKSLLRMGLILFAVS 285 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHcChHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHH
Confidence 343344444444566666666777888789 99999999999999999999999999999995 9999999998888887
Q ss_pred HHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhcccc
Q 009308 118 LVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLR 165 (538)
Q Consensus 118 ~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~ 165 (538)
.+++......+. .....+++...+.|+|.+...+.......|..|
T Consensus 286 ~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 330 (385)
T TIGR00710 286 AVLLEITAILGL---GSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP 330 (385)
T ss_pred HHHHHHHHHhcc---chHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence 766655432110 123445556777889999988888888877654
No 171
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.40 E-value=0.00049 Score=73.75 Aligned_cols=149 Identities=11% Similarity=0.065 Sum_probs=104.4
Q ss_pred HHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccC----CchHHHHHHHHHHHHhHHHHHhhhccccccch
Q 009308 58 VLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFS----GRLNVIFYSTISCILGLVLLFITAFEEAASPL 133 (538)
Q Consensus 58 ~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~l----Gr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~ 133 (538)
....|+++++ |+++++.....+.... -...-++-|.++|.+- -||.=+.++.++..++.+.+...+... .
T Consensus 11 ~~~~~l~~~l-~ls~~~~~~~~~~~~l-Pw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~----~ 84 (433)
T PF03092_consen 11 AIYPFLKDDL-GLSPAQLQRLSSLASL-PWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASE----S 84 (433)
T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHHhC-chHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhccccc----c
Confidence 4556888899 9999998886665544 4566788899999963 466666777777766655555432211 1
Q ss_pred hHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-------hhhhH
Q 009308 134 LKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL-------SSWRV 206 (538)
Q Consensus 134 ~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~-------~g~~~ 206 (538)
+.....+..++..+|........-++..|..++ +|++++++ -++.+...++|.+++..+ .+++.
T Consensus 85 s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~------~p~~~g~l---qS~~~~~~~~G~lv~~~l~G~l~~~~~~~~ 155 (433)
T PF03092_consen 85 SAAIAVVLLFLASFGYAFADVAADALVVELARR------EPESRGDL---QSFVWGVRSVGSLVGSLLSGPLLDSFGPQG 155 (433)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhc------CCchhHHH---HHHHHHHHHHHHHHHHHhhhhhhhcCCCeE
Confidence 344556777889999999999999999999765 34444443 356677888898888665 57777
Q ss_pred HHHHHHHHHHHHHHH
Q 009308 207 ISTFTVSATGITLFI 221 (538)
Q Consensus 207 ~F~i~~~~~~l~~~~ 221 (538)
.|.+.+++.++..+.
T Consensus 156 ~f~i~~~~~~l~~~~ 170 (433)
T PF03092_consen 156 VFLISAALPLLMLIV 170 (433)
T ss_pred EehHHHHHHHHHHHH
Confidence 788776666555443
No 172
>PRK10133 L-fucose transporter; Provisional
Probab=98.39 E-value=9.5e-06 Score=87.03 Aligned_cols=115 Identities=13% Similarity=-0.033 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHh-cccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHH
Q 009308 41 LLGLIFSHKLVDIAVVAVLITYL-TDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLV 119 (538)
Q Consensus 41 l~~~~~~er~~~~g~~~~l~~yl-~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ 119 (538)
.....++-..+.++....++.|+ ++.+ |++..+++.....+..+..++.+++|++.||+ ||||++..+..+..++.+
T Consensus 263 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~-g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~-g~~~~l~~~~~~~~~~~~ 340 (438)
T PRK10133 263 AVLAQFCYVGAQTACWSYLIRYAVEEIP-GMTAGFAANYLTGTMVCFFIGRFTGTWLISRF-APHKVLAAYALIAMALCL 340 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHH
Confidence 33344555566666667777885 5678 99999999999999999999999999999995 999999988887776655
Q ss_pred HHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccc
Q 009308 120 LLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRA 166 (538)
Q Consensus 120 ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~ 166 (538)
+..+.. +. ..+.+..+.|+|.|.+.|+..+...+..++
T Consensus 341 ~~~~~~--------~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~ 378 (438)
T PRK10133 341 ISAFAG--------GH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQ 378 (438)
T ss_pred HHHHcC--------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHcccch
Confidence 544332 11 224567789999999999999999998765
No 173
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.39 E-value=2e-06 Score=87.99 Aligned_cols=143 Identities=16% Similarity=0.146 Sum_probs=116.0
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCC-hHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHh
Q 009308 39 LILLGLIFSHKLVDIAVVAVLITYLTDYPRNYN-VVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILG 117 (538)
Q Consensus 39 ~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s-~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G 117 (538)
|.++...++..+.+.+....++.|+.+.+ |.+ ..+++.+.+.......++.++.|+++|| +|+++.+.+......++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~ 286 (352)
T PF07690_consen 209 WILLIAFFLFFFVFSGFSFFLPLYLQEVL-GFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDR-FGRRRRLLIAILLLILG 286 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCHHH-HCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHHhhcccchhhhhcc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHH
Confidence 44555556666677778888999988889 999 8999999999999999999999999999 59999888888888887
Q ss_pred HHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHH
Q 009308 118 LVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIA 197 (538)
Q Consensus 118 ~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i 197 (538)
.+.+.+..... +....++..++.|++.|...+...++..|..|+ +++.+..+.+....++|..+
T Consensus 287 ~~~~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----------~~~g~~~g~~~~~~~~~~~i 350 (352)
T PF07690_consen 287 ALGLLLLPFSS-----SPVWLIIALFLIGFGFGIVFPILFSLIQELVPP-----------EYRGTAFGLFNSIGSLGGII 350 (352)
T ss_dssp HHHHCCSHHHC-----HHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHT-----------CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhh-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-----------HHHHHHHHHHHHHHHHHHHH
Confidence 77766554211 345666788889999999999999999999876 24556778888889999998
Q ss_pred HH
Q 009308 198 SV 199 (538)
Q Consensus 198 ~~ 199 (538)
||
T Consensus 351 gP 352 (352)
T PF07690_consen 351 GP 352 (352)
T ss_dssp HH
T ss_pred CC
Confidence 86
No 174
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.38 E-value=4.5e-06 Score=88.66 Aligned_cols=158 Identities=11% Similarity=0.015 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcc-cCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHH-HHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTD-YPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNV-IFYSTIS 113 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~-~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~-i~~~~~~ 113 (538)
+.+|......++...+++++...++.|+++ .. +++..+++...........++.+++|+++||+ |||+. +....++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~-~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~-~~r~~~~~~~~~~ 319 (412)
T TIGR02332 242 PAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQ-GSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRL-KERKHHTALPYLF 319 (412)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCcHHHhHHHhhHHHHHHHHHHHHHHHHhccc-CccHHHHHHHHHH
Confidence 456777777888888999999999999987 46 67889999999999999999999999999995 86664 4444444
Q ss_pred HHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHH
Q 009308 114 CILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFF 193 (538)
Q Consensus 114 ~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~ni 193 (538)
..++.++..... +....+.+..+.++|.....+...+...|.+|+ +.+...+++.+...++
T Consensus 320 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-----------~~~~~a~g~~~~~~~~ 380 (412)
T TIGR02332 320 AAAGWLLASATD--------HNLIQLLGIIMASMGSFSAMAIFWTTPDQSISL-----------QARAIAIAVINATGNI 380 (412)
T ss_pred HHHHHHHHHhcC--------CHHHHHHHHHHHHHHhhhhhhHHHhhcccccch-----------HHHHHHHHHHHHhhhh
Confidence 444443322111 111222222233333322222222333444443 2455677888889999
Q ss_pred HHHHHHHh-------h-hhhHHHHHHHHH
Q 009308 194 SVIASVQL-------S-SWRVISTFTVSA 214 (538)
Q Consensus 194 G~~i~~~~-------~-g~~~~F~i~~~~ 214 (538)
|.++++.+ . +|..+|.+.++.
T Consensus 381 g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 381 GSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred hhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 99999876 2 588888765543
No 175
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.35 E-value=1.9e-05 Score=83.47 Aligned_cols=158 Identities=8% Similarity=-0.058 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
+.++..+...++...++++....+.+++.+.+ |++..+++.+...+.....++.++.|++.||. +| +.+..+..+..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~-~~-~~l~~~~~~~~ 292 (394)
T PRK10213 216 PGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLA-GFGVDGLTLVLLSFGIASFVGTSLSSFILKRS-VK-LALAGAPLVLA 292 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc-ch-hHHHHHHHHHH
Confidence 33444444445555666666666644444568 99999999999999999999999999999993 54 44444444433
Q ss_pred H-hHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHH
Q 009308 116 L-GLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFS 194 (538)
Q Consensus 116 ~-G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG 194 (538)
+ +.++..... +.+.+.+..++.|+|.+...+..++++.+..|+ +.. +..+.++...++|
T Consensus 293 ~~~~~l~~~~~--------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~---------~~~---~~~~~~~~~~~lg 352 (394)
T PRK10213 293 VSALVLTLWGS--------DKIVATGVAIIWGLTFALVPVGWSTWITRSLAD---------QAE---KAGSIQVAVIQLA 352 (394)
T ss_pred HHHHHHHHHhh--------hHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCcc---------cHH---HHHHHHHHHHHHH
Confidence 3 333333322 345666778889999999999999888887654 111 1223333344455
Q ss_pred HHHHHH----h---hhhhHHHHHHHHHHH
Q 009308 195 VIASVQ----L---SSWRVISTFTVSATG 216 (538)
Q Consensus 195 ~~i~~~----~---~g~~~~F~i~~~~~~ 216 (538)
..+|+. + .|++..|..+++..+
T Consensus 353 ~~~G~~l~G~l~~~~g~~~~~~~~~~~~~ 381 (394)
T PRK10213 353 NTCGAAIGGYALDNIGLTSPLMLSGTLML 381 (394)
T ss_pred HHHHHHHHHHHHhccChhhHHHHHHHHHH
Confidence 555544 4 567777776655443
No 176
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.34 E-value=7.9e-06 Score=84.69 Aligned_cols=182 Identities=14% Similarity=0.033 Sum_probs=132.6
Q ss_pred ccHHHHHhhhcCcCcccccchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHH
Q 009308 13 SSFRAIIRKLRFISWISYNICFCKAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIF 92 (538)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~ 92 (538)
.||++..+.-++...+ +.+..-+..-++-+=+-.++.+.-..|-.+.+ |+++.+...+....+..+.+++++
T Consensus 236 ~g~k~L~~t~k~i~~~-------~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~-gls~~~lll~g~~~~vvA~lg~ii 307 (438)
T COG2270 236 NGFKELKSTFKEIRGR-------KNLVLFLIARFFYIDGVNTILAMGGVFGAADL-GLSSTELLLIGIALSVVAALGAII 307 (438)
T ss_pred HHHHHHHHHHHHHhcc-------cchHHHHHHHHHHHhhHHHHHHHHHHHHHHHc-CccHHHHHHHHHHHHHHHHHHHHH
Confidence 4566555555444442 22222223344444466677777888999889 999999999999999999999999
Q ss_pred hhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCcccc
Q 009308 93 LTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKL 172 (538)
Q Consensus 93 gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~ 172 (538)
+|+|+||+ |-|+++.++.+++.+..+...+.. ....+++.=.+.|+..|..++..=++.++..|+
T Consensus 308 ~g~Ld~rf-g~k~vl~~~lvi~~~~~~~~~~~~--------~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~------ 372 (438)
T COG2270 308 AGFLDERF-GSKPVLMIGLVILSIAALYLIFLE--------GELDFWILGLLVGTSLGGAQASSRSYLARLVPK------ 372 (438)
T ss_pred HHHHHHHh-CCceeehHHHHHHHHHHHHHHHcc--------ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCC------
Confidence 99999995 999999999999888776655543 122344455679999999999999999999987
Q ss_pred CcccccceeeeehhhHHHHHHHHHHHHHh--------hhhhHHHHHHHHHHHHHHHHH
Q 009308 173 NISEHRVSARKRVWWLIPFFFSVIASVQL--------SSWRVISTFTVSATGITLFIF 222 (538)
Q Consensus 173 ~~~~r~~~~~~f~~~y~~~niG~~i~~~~--------~g~~~~F~i~~~~~~l~~~~~ 222 (538)
++-.++|+.|.+.--.++++|+.+ .+-|.++..-.+++.++++++
T Consensus 373 -----~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L 425 (438)
T COG2270 373 -----GKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLL 425 (438)
T ss_pred -----ccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhE
Confidence 234578899888899999999886 345555544444444555443
No 177
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.34 E-value=9.3e-06 Score=97.38 Aligned_cols=153 Identities=16% Similarity=-0.078 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
+.++.+....++-.+.+.++...++.|+++.+ |.+..+++.+.+.+.++..++.++.|+++|++ ++++.+..+.++..
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~ 302 (1140)
T PRK06814 225 KRIWLAILGISWFWLVGAVVLSQLPLLAKETL-GGDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMG 302 (1140)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHc-CCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHH
Confidence 45666666666677777788888999999999 99999999999999999999999999999985 66666666666555
Q ss_pred HhHHHHHhhh-c--cccc---------cchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeee
Q 009308 116 LGLVLLFITA-F--EEAA---------SPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARK 183 (538)
Q Consensus 116 ~G~~ll~~~~-~--~~~~---------~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~ 183 (538)
++.+.+.+.. . .+.. ...+.+.++++.++.|++.|+..+...+++.+..|+ +.+++.
T Consensus 303 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~-----------~~~G~v 371 (1140)
T PRK06814 303 LFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANP-----------AHRARV 371 (1140)
T ss_pred HHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCc-----------ccceee
Confidence 5444333320 0 0000 001345667788889999999999999999999876 245667
Q ss_pred ehhhHHHHHHHHHHHHHh
Q 009308 184 RVWWLIPFFFSVIASVQL 201 (538)
Q Consensus 184 f~~~y~~~niG~~i~~~~ 201 (538)
++.+....++|..+++.+
T Consensus 372 ~g~~~~~~~~~~~ig~~~ 389 (1140)
T PRK06814 372 IAANNVLNAAFMVAGTII 389 (1140)
T ss_pred eHHHHHHHHHHHHHHHHH
Confidence 777777778877777665
No 178
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.33 E-value=1.5e-05 Score=83.69 Aligned_cols=168 Identities=8% Similarity=-0.130 Sum_probs=109.2
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHH-HHHHHHHHhhhhhhccCCchHHHHHHHHHHHH
Q 009308 38 ALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEG-ISASTVIFLTCIPDAFSGRLNVIFYSTISCIL 116 (538)
Q Consensus 38 ~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~-~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~ 116 (538)
.+..+...++...+..+..+...+|+.+ . |++.++++.+...... ...++.+++|++.||+ |++|.+.++..+..+
T Consensus 210 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~-G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~ 286 (390)
T TIGR02718 210 AWSLLALALLSAMTAVSGFGLSKLYLVD-A-GWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-GLWRTFILGVGLAGS 286 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHh-c-CCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHH
Confidence 4445556667777777777788889976 8 9999999999887764 5567789999999995 999999888776644
Q ss_pred hHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHH
Q 009308 117 GLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVI 196 (538)
Q Consensus 117 G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~ 196 (538)
+.++......... .......+....+.+++.|...+...+...+..++ ++ .....++.+....++|..
T Consensus 287 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-------~~---~~g~~~~~~~~~~~lg~~ 354 (390)
T TIGR02718 287 LALLWFAQAAFWL--APGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGD-------GD---QAGTDVTAVQSTRDLGEL 354 (390)
T ss_pred HHHHHHHHHHccc--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-------cc---chHHHHHHHHHHHHHHHH
Confidence 3332221111000 00122333444455666777777777777776543 11 234455555666677777
Q ss_pred HHHHh-------hhhhHHHHHHHHHHHHHHH
Q 009308 197 ASVQL-------SSWRVISTFTVSATGITLF 220 (538)
Q Consensus 197 i~~~~-------~g~~~~F~i~~~~~~l~~~ 220 (538)
+++.+ .||+..|.+.+++.+++.+
T Consensus 355 ~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 355 IASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 77765 5788888777666555543
No 179
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.32 E-value=2e-05 Score=82.94 Aligned_cols=165 Identities=10% Similarity=0.020 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCC--CCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPR--NYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTIS 113 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~--g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~ 113 (538)
|.++.+....++--..+......+..|+++.+. +.+....+.+.+.......++.++.|++.||+ |||+.+.++.++
T Consensus 215 ~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~-g~~~~l~~~~~l 293 (396)
T TIGR00882 215 RKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI-GAKNALLIAGTI 293 (396)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHH
Confidence 334333333333334444444556677765430 34556677777777777788889999999995 999999999999
Q ss_pred HHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehh-hHHHHH
Q 009308 114 CILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVW-WLIPFF 192 (538)
Q Consensus 114 ~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~-~y~~~n 192 (538)
+.++..++.... +.+.+++..++.+++.+........+..+..++ +.....+.. +....+
T Consensus 294 ~~l~~~~~~~~~--------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-----------~~~at~~~~~~~~~~~ 354 (396)
T TIGR00882 294 MSVRIIGSSFAT--------TALEVVILKMLHAFEVPFLLVGCFKYITSQFDV-----------RLSATIYLIGFQFAKQ 354 (396)
T ss_pred HHHHHHHHHhcC--------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-----------ceEEEeehHHHHHHHH
Confidence 998887766543 345667778888888766655555566665443 122333433 446778
Q ss_pred HHHHHHHHh-------hhhhHHHHHHHHHHHHHHH
Q 009308 193 FSVIASVQL-------SSWRVISTFTVSATGITLF 220 (538)
Q Consensus 193 iG~~i~~~~-------~g~~~~F~i~~~~~~l~~~ 220 (538)
+|..+++.+ .||+..|.+.+++.++..+
T Consensus 355 lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~ 389 (396)
T TIGR00882 355 LAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTL 389 (396)
T ss_pred HHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 888888755 5888888776666554444
No 180
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.31 E-value=1e-05 Score=79.35 Aligned_cols=147 Identities=15% Similarity=0.080 Sum_probs=117.7
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHH-
Q 009308 32 ICFCKAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYS- 110 (538)
Q Consensus 32 ~~~~~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~- 110 (538)
..+...+|.+.+.-++--.+.+-..+.-+.+.++.+ |+|...|+.+.+.--+.+....++.|.+.|++ ||+-....+
T Consensus 260 ~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rf-GlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~~wv~~a 337 (459)
T KOG4686|consen 260 NTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRF-GLSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNLWWVASA 337 (459)
T ss_pred cccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhh-CCChhhccchhhhhhhhhhhhhhhHHHhHhhh-cceehhHHHH
Confidence 345567788887777666666655555678899999 99999999999999999999999999999996 998665544
Q ss_pred HHHHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHH
Q 009308 111 TISCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIP 190 (538)
Q Consensus 111 ~~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~ 190 (538)
++...+|+..+.++-. --+++..+.|++-.+.-...-++++-..|+ .+++.+|...+-.
T Consensus 338 ~~~tl~~H~~l~Ft~l----------sPy~~m~~lGLsysllAcslWP~va~~vpE-----------~qLGTaygf~qsI 396 (459)
T KOG4686|consen 338 CILTLLGHSGLFFTFL----------SPYTSMTFLGLSYSLLACSLWPCVASLVPE-----------EQLGTAYGFIQSI 396 (459)
T ss_pred HHHHHHHhhhHHhhhc----------cHHHHHHHHhhhHHHHHHHHhhhhhhhCCH-----------HHhcchHHHHHHH
Confidence 4556668888887643 236788889998888777788888888877 3788889888999
Q ss_pred HHHHHHHHHHh
Q 009308 191 FFFSVIASVQL 201 (538)
Q Consensus 191 ~niG~~i~~~~ 201 (538)
.|+|-.+.+++
T Consensus 397 qNLgla~i~Ii 407 (459)
T KOG4686|consen 397 QNLGLAFIPII 407 (459)
T ss_pred HhhhhhHHhhh
Confidence 99999888876
No 181
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.30 E-value=2.2e-05 Score=83.76 Aligned_cols=161 Identities=16% Similarity=0.178 Sum_probs=120.0
Q ss_pred HHHHhhhcCcCcccccchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhcc-cCCCCChHHHHHHHHHHHHHHHHHHHHhh
Q 009308 16 RAIIRKLRFISWISYNICFCKAALILLGLIFSHKLVDIAVVAVLITYLTD-YPRNYNVVEAARLVNLQEGISASTVIFLT 94 (538)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~er~~~~g~~~~l~~yl~~-~l~g~s~~~a~~i~~~~~~~~~~~~l~gG 94 (538)
.+.++..++.+| |++++....++.....+.-..+..-+|+++ +. +.+.+.-|+++++...+..+..+..|
T Consensus 22 ~~~~~~~~~t~w--------rsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~-~A~~~ffG~viaa~slg~~i~~liF~ 92 (488)
T KOG2325|consen 22 SLSPLDERKTNW--------RSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDP-TATATFFGLVIAASSLGHAIFSLIFG 92 (488)
T ss_pred ccccccccCCch--------HhHHHHHHHHHHHhhhheEEEeecchhhhhcCC-CCCcchhhHHHHHHHHHHHhcchhhc
Confidence 344556677888 899999999999988888788888899985 46 78889999999999999999999999
Q ss_pred hhhhccCCc-hHHHHHHHHHHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccC
Q 009308 95 CIPDAFSGR-LNVIFYSTISCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLN 173 (538)
Q Consensus 95 ~laD~~lGr-~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~ 173 (538)
+-..|. |+ |+-++.|.++.++|.++....+..|+ ...++.+++|++.|+|.|.. ...=+|++|-..
T Consensus 93 ~Ws~k~-~~~k~Pli~s~ii~~~g~llY~~l~~~~~---~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~-------- 159 (488)
T KOG2325|consen 93 IWSNKT-GSVKKPLIVSFLIAIIGNLLYLALAYVPN---GVKYLMLVARILTGVGVGNF-AVLRAYIADAST-------- 159 (488)
T ss_pred cccccc-CCcccCHHHHHHHHHHHHHHHHHHHhccc---chHHHHHHHHHHcCcCcccH-HHHHHHHHhccC--------
Confidence 999995 75 78888999999999999843333221 14678899999999998865 445577777533
Q ss_pred cccccceeeeehhhHHHHHHHHHHHHHh
Q 009308 174 ISEHRVSARKRVWWLIPFFFSVIASVQL 201 (538)
Q Consensus 174 ~~~r~~~~~~f~~~y~~~niG~~i~~~~ 201 (538)
+++| .+++.....+..+|..+||.+
T Consensus 160 ~~dR---~rA~a~~~~~~vlg~ilGp~~ 184 (488)
T KOG2325|consen 160 VEDR---PRAFAATSGGFVLGIILGPTI 184 (488)
T ss_pred ccch---HHHHHHhhhHHHHHHHHhHHH
Confidence 2332 344444334445555555543
No 182
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.30 E-value=4.8e-06 Score=85.90 Aligned_cols=148 Identities=12% Similarity=0.030 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHH--H
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTI--S 113 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~--~ 113 (538)
+.++.+....++......++...++.|+++.+ |++..+++.....+.....++.+++|+++||..+|++....... .
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~ 294 (379)
T TIGR00881 216 KVLWYISLGYVFVYVVRTGILDWSPLYLTQEK-GFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMAL 294 (379)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHH
Confidence 45666667777777777888888999999889 99999999999999999999999999999985444443322221 1
Q ss_pred HHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHH
Q 009308 114 CILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFF 193 (538)
Q Consensus 114 ~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~ni 193 (538)
..++...+..... .+.....+..++.|+..++..+...++..|..|+ +.+....+++....++
T Consensus 295 ~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----------~~~g~~~g~~~~~~~~ 357 (379)
T TIGR00881 295 IIVSLLVYWLNPA------ANPLMDLICLFALGFLVYGPQMLIGVIASELAPK-----------KAAGTAAGFVGFFAYL 357 (379)
T ss_pred HHHHHHHHhcCcc------hhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCc-----------chhHHHHHHHHHhhhh
Confidence 1222222111100 1233444555566665555556666778888765 2345666777778888
Q ss_pred HHHHHHHh
Q 009308 194 SVIASVQL 201 (538)
Q Consensus 194 G~~i~~~~ 201 (538)
|..+++.+
T Consensus 358 g~~~~~~~ 365 (379)
T TIGR00881 358 GGILAGLP 365 (379)
T ss_pred hhhhhhhh
Confidence 88888765
No 183
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.30 E-value=1.7e-05 Score=86.75 Aligned_cols=160 Identities=16% Similarity=0.080 Sum_probs=122.4
Q ss_pred HHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHH
Q 009308 43 GLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLF 122 (538)
Q Consensus 43 ~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~ 122 (538)
...++-.+...++...++.+..+.+ |.+...-|.+.+.+..++.++.++.+.+.++ +++.+.+..+.+.+.++.+.+.
T Consensus 225 ~~~~~~~l~~~a~~aLlPl~a~~~l-~~~a~~yGll~a~~gvGai~Gal~~~~l~~~-~~~~~lv~~~~~~~a~~~~~la 302 (524)
T PF05977_consen 225 LRSFLFNLFASAVWALLPLFARDVL-GGGASGYGLLLAAFGVGAILGALLLPRLRRR-LSSRRLVLLASLLFALALLLLA 302 (524)
T ss_pred HHHHHHHHhhhHHHHhhhHHHHHHh-CCcHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCcchhhHHHHHHHHHHHHHHh
Confidence 3334444444556677888888889 9999999999999999999999999999999 5999999999998888887777
Q ss_pred hhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-
Q 009308 123 ITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL- 201 (538)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~- 201 (538)
++. +.+...+.+++.|++.....+...+.+-...|+ ..+++.++.+....+.|..+|.++
T Consensus 303 l~~--------~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~-----------~~~GRv~si~~~~~~g~~~lGsll~ 363 (524)
T PF05977_consen 303 LSP--------SFWLALIALFLAGAAWIIANSSLNTLVQLSVPD-----------WVRGRVFSIYQMVFFGGMPLGSLLW 363 (524)
T ss_pred cch--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-----------HHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 764 466777888899999999888888888777765 245666777666666666666554
Q ss_pred ------hhhhHHHHHHHHHHHHHHHHHH
Q 009308 202 ------SSWRVISTFTVSATGITLFIFR 223 (538)
Q Consensus 202 ------~g~~~~F~i~~~~~~l~~~~~~ 223 (538)
.|-+..+.++++.++++.++..
T Consensus 364 G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 364 GFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 5666777777766665555443
No 184
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.29 E-value=1.9e-05 Score=85.12 Aligned_cols=169 Identities=14% Similarity=0.044 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHH--------H
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNV--------I 107 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~--------i 107 (538)
+.+|.+....++...+++.....++.|+++.+ |++..+++...+.......++.+++|+++||. ++|+. +
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~-g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~-~~~~~~~~~~~~~~ 338 (465)
T TIGR00894 261 LPVWAIWFAIFGHFWLYTILPTYLPTFISWVL-RVSGKENGLLSSLPYLFAWLCSIFAGYLADFL-KSSKTLSLTAARKI 338 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcChHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCcHHHHHHH
Confidence 45688888888888999999999999999999 99999999999999999999999999999985 54322 1
Q ss_pred HHHHHHHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhh
Q 009308 108 FYSTISCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWW 187 (538)
Q Consensus 108 ~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~ 187 (538)
..+......+..++..... . .+.....+...+.+.+.++..++......|..|. ......+..
T Consensus 339 ~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~------------~~g~~~g~~ 401 (465)
T TIGR00894 339 FNGIGGLGPGIFAYALPYL-S----AAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR------------FLGFIKGIT 401 (465)
T ss_pred HHHHHHHHHHHHHHHHHHc-C----CchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh------------HHHHHHHHH
Confidence 1111111111111111110 0 0122334444455555555555544444444321 334455666
Q ss_pred HHHHHHHHHHHHHh----------hhhhHHHHHHHHHHHHHHHHHH
Q 009308 188 LIPFFFSVIASVQL----------SSWRVISTFTVSATGITLFIFR 223 (538)
Q Consensus 188 y~~~niG~~i~~~~----------~g~~~~F~i~~~~~~l~~~~~~ 223 (538)
....++|.++++.+ .+|...|.+.++..+++.+++.
T Consensus 402 ~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~ 447 (465)
T TIGR00894 402 GLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYL 447 (465)
T ss_pred HHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHee
Confidence 67778888888766 1377888887777777666544
No 185
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.28 E-value=1.2e-05 Score=83.13 Aligned_cols=145 Identities=11% Similarity=0.093 Sum_probs=102.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
+..+.+.....+..+.++++...++.|+++ . |.+..+++.+.+.+..+..++.++.|+++||+-+||+++.++..+..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~-g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 274 (355)
T TIGR00896 197 PLAWQVTVFFGLQSGLYYSLIGWLPAILIS-H-GASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQL 274 (355)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-c-CCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHH
Confidence 445555555566677788888888889875 8 99999999999999999999999999999995356777888888888
Q ss_pred HhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHH
Q 009308 116 LGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSV 195 (538)
Q Consensus 116 ~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~ 195 (538)
++.+++..... +. .. ....+.|+|.|...|...+...+..++ ++ +....++..+...++|.
T Consensus 275 ~~~~~~~~~~~-------~~-~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~-------~~---~~g~~~~~~~~~~~~~~ 335 (355)
T TIGR00896 275 VGLCGLLFAPM-------HG-LW-AWALVLGLGQGGAFPLALTLIGLRSRQ-------AA---QAAALSAMAQSIGYLLA 335 (355)
T ss_pred HHHHHHHHhhh-------hH-HH-HHHHHHHHhhhhHhHHHHHHHHHhccC-------HH---HHHHHHHHHHHHHHHHH
Confidence 88766654421 11 11 234678999999988887877765443 11 22333444444556666
Q ss_pred HHHHHh
Q 009308 196 IASVQL 201 (538)
Q Consensus 196 ~i~~~~ 201 (538)
.+++.+
T Consensus 336 ~~gp~~ 341 (355)
T TIGR00896 336 ALGPLF 341 (355)
T ss_pred HHHHHH
Confidence 667655
No 186
>PRK10054 putative transporter; Provisional
Probab=98.27 E-value=1.9e-05 Score=83.48 Aligned_cols=164 Identities=12% Similarity=-0.002 Sum_probs=108.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhc--ccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLT--DYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTIS 113 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~--~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~ 113 (538)
|.++......++..+.+......+..|+. ++. +.+...++.+............++.|.+.||+ |+|+.+..+..+
T Consensus 206 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~l~~~~~~ 283 (395)
T PRK10054 206 KALLWFTCSGFLASFVSGAFASCISQYVMVVADS-DFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA-NIRPLMTAGTLC 283 (395)
T ss_pred ceehHHHHHHHHHHHHHHHhhhhHHHHHHHhccc-chHHHHHHHHHHhhhhheeeehhHHHHHHccC-CchhHHHHHHHH
Confidence 34444445555555555545455556654 245 66667777787777777677778889999995 999999999988
Q ss_pred HHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHH
Q 009308 114 CILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFF 193 (538)
Q Consensus 114 ~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~ni 193 (538)
..++.+++.+... +.+.+.+...+.++|.+...|+..+++.+..|+ +.+.++++.. ...++
T Consensus 284 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~-----------~~~~~~~~~~-~~~~~ 344 (395)
T PRK10054 284 FVIGLVGFIFSGN-------SLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPP-----------GMKASYFSAQ-SLGWL 344 (395)
T ss_pred HHHHHHHHHHcch-------HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCc-----------ccceehHhHH-HHHHH
Confidence 8888877665321 344566778899999998899998899998765 1334455432 23446
Q ss_pred HHHHHHHh-------hhhhHHHHHHHHHHHHHHH
Q 009308 194 SVIASVQL-------SSWRVISTFTVSATGITLF 220 (538)
Q Consensus 194 G~~i~~~~-------~g~~~~F~i~~~~~~l~~~ 220 (538)
|..+|+.+ .|....|.+-+++..++.+
T Consensus 345 G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~ 378 (395)
T PRK10054 345 GAAINPLVSGVILTTLPPWSLFVILALAIVAAWL 378 (395)
T ss_pred HHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHH
Confidence 67777665 4555566554444444333
No 187
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.26 E-value=7.9e-05 Score=77.86 Aligned_cols=107 Identities=15% Similarity=0.127 Sum_probs=81.8
Q ss_pred HHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHH
Q 009308 57 AVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKR 136 (538)
Q Consensus 57 ~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~ 136 (538)
+....|..+.+ + +...+.+...+|...+....+.+-|+.|++ |-|-+.+++.++.++|..+=.++..+..+......
T Consensus 65 a~i~n~~~~~Y-g-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~-GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~ 141 (480)
T KOG2563|consen 65 APINNYVNSFY-G-SSSAADWLSMIYMVVSVPFGFAAMWILDKF-GLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRP 141 (480)
T ss_pred hhHHHHHHHHh-c-chHHHHHHHHHHHHHHHHHhhHHHHhhccc-chHHHHHHHHHHHHHHHHHhhhccCccccccchhh
Confidence 35667777777 7 777888999999999999999999999995 99999999999999999887777654221111223
Q ss_pred HHHHHHHHHHHhchhhcccchhhhhccccc
Q 009308 137 LILIGVVLLAVGKAGMQHFLGPFLADQLRA 166 (538)
Q Consensus 137 ~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~ 166 (538)
..+.|-.+.+.++-.+...-+=..+-++++
T Consensus 142 l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~ 171 (480)
T KOG2563|consen 142 LTHTGQSIAAAAQPFILGLPSKIAAVWFPP 171 (480)
T ss_pred hhHHhHHHHHHhhhHhhccccHHHHhhCCc
Confidence 667788888887777665555555666765
No 188
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.25 E-value=3.7e-05 Score=79.97 Aligned_cols=117 Identities=9% Similarity=-0.031 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHH
Q 009308 43 GLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLF 122 (538)
Q Consensus 43 ~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~ 122 (538)
...++...+++......+.+..+.. |.+..+++.+.........++.+++|+++||+ |||+++.++..+..+..+.+.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~ 278 (377)
T PRK11102 201 LASGFSFAGMFSFLTAGPFVYIELN-GVSPQNFGYYFALNIVFLFVMTIINSRFVRRV-GALNMLRFGLWIQFIMGIWLV 278 (377)
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHh-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHH
Confidence 3344444455555555566777778 99999999999999999999999999999995 999999988877554333222
Q ss_pred hhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhcccc
Q 009308 123 ITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLR 165 (538)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~ 165 (538)
.....+ .+.+...++..+.+.+.+...++......|..|
T Consensus 279 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (377)
T PRK11102 279 VSALLD----LGFWALVVGVAAFVGCVSMISSNAMAVILDEFP 317 (377)
T ss_pred HHHHHh----hhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc
Confidence 221100 123334445555556666666666666666544
No 189
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.25 E-value=2.6e-05 Score=82.41 Aligned_cols=165 Identities=14% Similarity=0.056 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHH-HHHHHHHHHhhhhhhccCCchHHHHHHHHHHHH
Q 009308 38 ALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQE-GISASTVIFLTCIPDAFSGRLNVIFYSTISCIL 116 (538)
Q Consensus 38 ~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~-~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~ 116 (538)
++.++...++-.++........++|+.+.+ |++.++.+.+..... ....++.+++|++.||+ |||+.+.++..+..+
T Consensus 211 ~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~-G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~-g~~~~l~~~~~~~~l 288 (402)
T PRK11902 211 AWALLLLIVLYKLGDAFAGSLSTTFLIRGA-GFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL-GLYRSLMLFGVLQAV 288 (402)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHH
Confidence 333334434444333222233445677778 999999999887654 45788899999999995 999998877777666
Q ss_pred hHHHHHhhhccccccchhHHHHHHHH----HHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHH
Q 009308 117 GLVLLFITAFEEAASPLLKRLILIGV----VLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFF 192 (538)
Q Consensus 117 G~~ll~~~~~~~~~~~~~~~~~~~~l----~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~n 192 (538)
..+.+...+..+ .+.+.+.++. +..+++.+...+....++.+.+|. + . ++.+....+
T Consensus 289 ~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----~------~----~~~~~~~~~ 349 (402)
T PRK11902 289 SNLGYWVLAVTP----KHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSA-----T------Q----YALLSALAS 349 (402)
T ss_pred HHHHHHHHHhcC----CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcH-----H------H----HHHHHHHHH
Confidence 544433222111 0233344443 345666777777777777777654 1 1 122222223
Q ss_pred HHHH----HHHHh---hhhhHHHHHHHHHHHHHHHHHH
Q 009308 193 FSVI----ASVQL---SSWRVISTFTVSATGITLFIFR 223 (538)
Q Consensus 193 iG~~----i~~~~---~g~~~~F~i~~~~~~l~~~~~~ 223 (538)
+|.. ++..+ .||+..|.+.+++.+++.++..
T Consensus 350 l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~ 387 (402)
T PRK11902 350 VGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLW 387 (402)
T ss_pred HHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 4443 33333 7999999888777776655543
No 190
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.24 E-value=4.8e-06 Score=81.60 Aligned_cols=126 Identities=11% Similarity=-0.013 Sum_probs=95.2
Q ss_pred HHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHH
Q 009308 57 AVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKR 136 (538)
Q Consensus 57 ~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~ 136 (538)
..+..+.+.+. +.+.++...+.+.++--..+.|.+||++.||.+|-|..-.+-+.+..+|.++++..... ...+
T Consensus 64 ~alq~~fk~d~-ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~-----~aFw 137 (459)
T KOG4686|consen 64 GALQIDFKLDS-NIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGIS-----HAFW 137 (459)
T ss_pred hhhhhhhhccc-ccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHH-----HHHH
Confidence 34566777677 78888888999999999999999999999999999877777777778888887754321 1477
Q ss_pred HHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHH
Q 009308 137 LILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASV 199 (538)
Q Consensus 137 ~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~ 199 (538)
+...||++.|+|.--.-...+.+..-.++. + .+.-.|+.+.-..-+|+.+-.
T Consensus 138 ~M~~GRF~FGIGgESlAVaQN~yav~wFKG--------K---ELn~vfGlqlSvAR~GstvNf 189 (459)
T KOG4686|consen 138 TMLAGRFLFGIGGESLAVAQNKYAVYWFKG--------K---ELNFVFGLQLSVARLGSTVNF 189 (459)
T ss_pred HHHhhheeeccCchhhhhhhcceeEEEecC--------c---cccchhhHHHHHHHhhceeee
Confidence 889999999999988888888888888876 2 344555555444445554433
No 191
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.22 E-value=5.2e-05 Score=80.40 Aligned_cols=128 Identities=16% Similarity=0.108 Sum_probs=88.7
Q ss_pred HHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhcccccc
Q 009308 52 DIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAAS 131 (538)
Q Consensus 52 ~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~ 131 (538)
.+++...++.|+++ . |++..+++.+......+..++.+++|++.||+ |||+++..+.++..++.+++.....
T Consensus 247 ~~~~~~~~~~~~~~-~-g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~~~----- 318 (426)
T PRK12307 247 NWPIFGLLPTYLAG-E-GFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI-GLKKTFSIGLLMSFLFIFPLFRIPQ----- 318 (426)
T ss_pred HHHHHHHHHHHHHH-c-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHcc-----
Confidence 33456677888875 7 89999999999999999999999999999995 9999999888877766554433211
Q ss_pred chhHHHHHHHHHHHHH--hchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh
Q 009308 132 PLLKRLILIGVVLLAV--GKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL 201 (538)
Q Consensus 132 ~~~~~~~~~~l~l~g~--g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~ 201 (538)
... ..++..+.++ +..+..+..++++.|.+|+ +.+.+..+..+...++|..+++.+
T Consensus 319 -~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-----------~~~g~~~g~~~~~~~~~~~~gp~~ 376 (426)
T PRK12307 319 -DNY--LLLGACLFGLMATNVGVGGLVPKFLYDYFPL-----------EVRGLGTGLIYNLAATSGTFNSMA 376 (426)
T ss_pred -ccH--HHHHHHHHHHHHhcccHhHHHHHHHHHhCcH-----------HHHhhhhhHHHHHHhHHHHHHHHH
Confidence 011 1222223332 3333445566788888876 234556677777778888888876
No 192
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.22 E-value=4.3e-05 Score=80.67 Aligned_cols=150 Identities=8% Similarity=-0.096 Sum_probs=103.3
Q ss_pred HHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccc
Q 009308 49 KLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEE 128 (538)
Q Consensus 49 r~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~ 128 (538)
..........++.|+++.+ |.+..++|.+......+..++.++.+++.|++ ++++.+..+..+ .++.+++....
T Consensus 218 ~~~~~~~~~~~~~~~~~~l-g~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~-~~~~~~~~g~~~-~~~~~~~~~~~--- 291 (393)
T PRK11195 218 WGAGATLRFLVLAWAPVAL-GITLNQPAYLQAVVAIGIAVGAGAAARLVTLE-TVLRVLPAGILM-GLVVLLMALQH--- 291 (393)
T ss_pred HHHHHHHHHHHHHHHHHHc-CCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccchHHHHHHH-HHHHHHHHHHh---
Confidence 3444555556677888889 99999999999999999999999999999995 988888877533 33333333222
Q ss_pred cccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh------h
Q 009308 129 AASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL------S 202 (538)
Q Consensus 129 ~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~------~ 202 (538)
+.+...+..++.|++.|...+...+.+.+..|+ + ..+.+.++...+..|+|..++..+ .
T Consensus 292 -----~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~---------~-~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~ 356 (393)
T PRK11195 292 -----SLLPAYPLLILIGALGGFFVVPMNALLQHRGHV---------L-VGAGHSIAVQNFNENLAMLLMLGLYSLLVKL 356 (393)
T ss_pred -----HHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcc---------c-ccchhHHHHHhHHHHHHHHHHHHHHHHHHHc
Confidence 344556677789999999888888887664222 1 124566667778888888888765 3
Q ss_pred hhhHHHHHHHHHHHHHH
Q 009308 203 SWRVISTFTVSATGITL 219 (538)
Q Consensus 203 g~~~~F~i~~~~~~l~~ 219 (538)
|-+..+.+..+..++++
T Consensus 357 ~~~~~~~~~~~~~~~~~ 373 (393)
T PRK11195 357 GVPVVAVIVGFGLLVAL 373 (393)
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 44444544443333333
No 193
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.22 E-value=3.2e-05 Score=83.80 Aligned_cols=156 Identities=15% Similarity=0.090 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
|.+..+++..++..++.+...+....|.+..+ + +....+.+.........++.++.++++||+ |||+++.++..+.+
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~-~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gkk~~~~~~~~~~~ 307 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVI-G-DADLFPYYLSYAGAANLVTLILFPRLVKSL-SRRILWAGASIFPV 307 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEEC-C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHH
Confidence 66667777777777777766666655555445 4 455566666666677888889999999995 99999999988877
Q ss_pred HhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHH
Q 009308 116 LGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSV 195 (538)
Q Consensus 116 ~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~ 195 (538)
++.+.+......+ ..+.+.+++..++.++|.+...+...++++|..|.+ +.+..+++-+.+++.+.+...+|.
T Consensus 308 ~~~~~~~~~~~~~---~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~----e~~tG~R~~G~~~s~~~~~~K~~~ 380 (473)
T PRK10429 308 LSCGVLLLMGLAA---PHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYG----EYKLGIRCESIAYSVQTMVVKGGS 380 (473)
T ss_pred HHHHHHHHHhccC---chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh----hHhcCccchhHHHHHHHHHHHHHH
Confidence 7766654321111 013456667777889999999999999999998751 001111123336677778888888
Q ss_pred HHHHHh
Q 009308 196 IASVQL 201 (538)
Q Consensus 196 ~i~~~~ 201 (538)
.+++.+
T Consensus 381 al~~~i 386 (473)
T PRK10429 381 AFAAFF 386 (473)
T ss_pred HHHHHH
Confidence 887665
No 194
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.19 E-value=4.1e-05 Score=81.00 Aligned_cols=126 Identities=8% Similarity=0.001 Sum_probs=89.8
Q ss_pred hHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchh
Q 009308 55 VVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLL 134 (538)
Q Consensus 55 ~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~ 134 (538)
....++.|+++.. + ++.+++.+.+.............+.+.|+.++.++.+..+.++..++.+++.... +
T Consensus 227 ~~~~~p~~~~~~~-~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~--------~ 296 (400)
T PRK11646 227 VMLMLPIMVNDIA-G-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS--------N 296 (400)
T ss_pred HHHhhhhhHHhhc-C-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh--------h
Confidence 4445677787655 4 6688888877766655555554556665545777777888888888877665543 3
Q ss_pred HHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh
Q 009308 135 KRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL 201 (538)
Q Consensus 135 ~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~ 201 (538)
...+.+...+.++|.+...|...+++.|..|+ +++.+.++.+....++|..+|+.+
T Consensus 297 ~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~-----------~~~g~~~g~~~~~~~~g~~ig~~l 352 (400)
T PRK11646 297 LQQLFTLICLFYIGSIIAEPARETLSASLADA-----------RARGSYMGFSRLGLALGGAIGYIG 352 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHccHHHHHHhcCCc-----------ccchhhhhHHHHHHHHHHHhcccc
Confidence 44556667788899999999999999999876 244566677777888888888776
No 195
>PRK09669 putative symporter YagG; Provisional
Probab=98.16 E-value=5e-05 Score=81.45 Aligned_cols=153 Identities=8% Similarity=-0.014 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
|.++.++...++...+.....+....|.+..+ +. ....+.+.........++.++.++++||+ |||+++.++.++.+
T Consensus 229 ~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~-~~-~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gk~~~~~~~~~~~~ 305 (444)
T PRK09669 229 SQWRIMFIFNVVLLTAVVTRGGATLYYVNYVL-LR-PDLATLFLVTGMIAGLFGALLSERLLGKF-DRVRAFKWTIVAFV 305 (444)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhheeeeeec-CC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHH
Confidence 44555555555555555433333333444434 32 33344455555666778888999999995 99999998887766
Q ss_pred HhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHH
Q 009308 116 LGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSV 195 (538)
Q Consensus 116 ~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~ 195 (538)
++.+.+.+.. + .+.+.+++..++.++|.+...+...++++|..|.+| .+.++| +-..+++.+.++.++|.
T Consensus 306 ~~~~~~~~~~--~----~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e---~~~G~r-~~g~~~s~~~~~~klg~ 375 (444)
T PRK09669 306 ILSALIFFIP--P----SNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEE---KRSGRR-LDGLVFSTNLFAIKLGL 375 (444)
T ss_pred HHHHHHHHhC--c----chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh---hhcCcC-cchHHHHHHHHHHHHHH
Confidence 5443332221 1 135567777889999999999999999999987410 001111 22335577778888888
Q ss_pred HHHHHh
Q 009308 196 IASVQL 201 (538)
Q Consensus 196 ~i~~~~ 201 (538)
.+|+.+
T Consensus 376 alg~~i 381 (444)
T PRK09669 376 AIGGAV 381 (444)
T ss_pred HHHHHH
Confidence 888765
No 196
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.16 E-value=3.4e-05 Score=78.53 Aligned_cols=158 Identities=15% Similarity=0.133 Sum_probs=119.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHH
Q 009308 35 CKAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISC 114 (538)
Q Consensus 35 ~~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~ 114 (538)
++..|.+....-...+.||.+..-++.++.| . |+|.+++|.+++..+.......+.+-++++|.-.+|+.....+..+
T Consensus 207 ~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~-~-G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~ 284 (395)
T COG2807 207 SPLAWQVTLFMGLQSLLYYIVIGWLPAILID-R-GLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLM 284 (395)
T ss_pred CchhHHHHHHHHhhHHHHHHHHHHHHHHHHH-c-CCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Confidence 3556778888889999999999999998886 6 8999999999999999999999999999998778888889999999
Q ss_pred HHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeee-hhhHHHHHH
Q 009308 115 ILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKR-VWWLIPFFF 193 (538)
Q Consensus 115 ~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f-~~~y~~~ni 193 (538)
.+|.+-+.+... +.+.+. .++.|+|.|+..|....++.+-.+ ||++..+++.+- +.=|.--.+
T Consensus 285 l~G~~G~~~~P~-------~~~~lw--~~llG~G~G~~F~laL~li~~rs~-------~a~~Aa~LSgmaQg~GYllAa~ 348 (395)
T COG2807 285 LVGLVGLLLAPG-------QLPILW--ALLLGLGQGGAFPLALTLILLRSS-------DAAIAAALSGMAQGVGYLLAAF 348 (395)
T ss_pred HHHHHHHHHhhh-------hHHHHH--HHHHhCccchHHHHHHHHHHhhcC-------ChHHHHHHHHHhhhhhHHHHhh
Confidence 999888776532 333333 488999999999999999999874 355555444333 222233333
Q ss_pred HHHHHHHh----hhhhHHHHH
Q 009308 194 SVIASVQL----SSWRVISTF 210 (538)
Q Consensus 194 G~~i~~~~----~g~~~~F~i 210 (538)
|..+...+ .+|......
T Consensus 349 GP~l~G~lhDa~gsw~~~~~~ 369 (395)
T COG2807 349 GPWLFGFLHDATGSWSAPLVL 369 (395)
T ss_pred hhhhHhHHHHhcCChHHHHHH
Confidence 33333333 578776654
No 197
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.13 E-value=4.8e-05 Score=77.73 Aligned_cols=152 Identities=11% Similarity=0.001 Sum_probs=102.8
Q ss_pred hHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchh
Q 009308 55 VVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLL 134 (538)
Q Consensus 55 ~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~ 134 (538)
++.+....+.+.. |+++.+.+.+...--+.+.+...+.|.++||+ ||||..+..++++.+..+.--.. +
T Consensus 52 LQGpY~Y~LY~~y-g~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~-Grk~~cl~~cily~~scl~k~~~---------~ 120 (354)
T PF05631_consen 52 LQGPYLYALYESY-GFSEHQIAILFVAGFASSAIFGTFVGSLADRY-GRKKACLLFCILYSLSCLTKHSS---------N 120 (354)
T ss_pred hhcchhHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHhcc---------c
Confidence 4555444455568 99999999998888888899999999999995 99999999999999887654332 4
Q ss_pred HHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHH-HHHHHHHHh---------hhh
Q 009308 135 KRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFF-FSVIASVQL---------SSW 204 (538)
Q Consensus 135 ~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~n-iG~~i~~~~---------~g~ 204 (538)
.+.++++|++-|+++.....+--+.......++ +-|+| .+...|+...+..| +-++++..+ .|-
T Consensus 121 ~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~----g~~~~--~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~ 194 (354)
T PF05631_consen 121 YPVLLLGRVLGGIATSLLFSAFESWMVHEHNKR----GFPQE--WLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGP 194 (354)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----CCChH--HHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCC
Confidence 789999999999999998887777655443320 11222 23434433221122 222223222 234
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 009308 205 RVISTFTVSATGITLFIFR 223 (538)
Q Consensus 205 ~~~F~i~~~~~~l~~~~~~ 223 (538)
..+|..+.++.+++.++..
T Consensus 195 vaPF~~a~~~l~~~~~~I~ 213 (354)
T PF05631_consen 195 VAPFDAAIVLLAVAAVLIL 213 (354)
T ss_pred cchHHHHHHHHHHHHHHHH
Confidence 6678887777766665433
No 198
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.12 E-value=5.2e-05 Score=81.35 Aligned_cols=123 Identities=18% Similarity=-0.003 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHH
Q 009308 37 AALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCIL 116 (538)
Q Consensus 37 ~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~ 116 (538)
..|.+...-++-.-+|.+....++.|+++.+ +...+.....+......+..+++|+++||+ |++|++.++.+...+
T Consensus 253 ~~Wllslly~~tFG~fvg~s~~lp~~~~~~~---~~~~~l~~~~l~~l~~~l~rplgG~LADRi-G~~~vl~~~~i~~~i 328 (462)
T PRK15034 253 HLWLLSLLYLATFGSFIGFSAGFAMLAKTQF---PDVNILRLAFFGPFIGAIARSVGGAISDKF-GGVRVTLINFIFMAI 328 (462)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHc---ChHHHHHHHHHHHHHHHHHHHhhHHHHHhc-CchHHHHHHHHHHHH
Confidence 4566666667776678888888999988744 344433334445677888899999999995 999999999987777
Q ss_pred hHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhcccc
Q 009308 117 GLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLR 165 (538)
Q Consensus 117 G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~ 165 (538)
+...+...- |.....+.+.+.++.+.+.++.|.-+..+.-++.+.+|
T Consensus 329 ~~~~~~l~l--p~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~ 375 (462)
T PRK15034 329 FSALLFLTL--PGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFR 375 (462)
T ss_pred HHHHHHHHh--ccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHh
Confidence 654432221 11111234555555555555555555566666666665
No 199
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.07 E-value=0.00021 Score=75.03 Aligned_cols=67 Identities=13% Similarity=0.139 Sum_probs=56.8
Q ss_pred HHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhh
Q 009308 57 AVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITA 125 (538)
Q Consensus 57 ~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~ 125 (538)
...+.|+++.+ |++..+.+.+.........++.++.|++.||+ |||+.+.++..+..++.+++.+..
T Consensus 224 ~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~ 290 (392)
T PRK10473 224 NTSPVLLMEQM-GFSRGEYAIIMALTAGVSMTVSFSTPFALGIF-KPRTLMLTSQVLFLAAGITLALSP 290 (392)
T ss_pred HhCHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33455677778 99999999999989999999999999999995 999999999999888887776653
No 200
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.06 E-value=2e-05 Score=81.44 Aligned_cols=122 Identities=15% Similarity=0.109 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHh
Q 009308 38 ALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILG 117 (538)
Q Consensus 38 ~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G 117 (538)
.+.+....++.-..++++...++.|+++.+ |.++.+++.+...+.....++.+++|+++||+ |||+.+..+.....++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~ 304 (366)
T TIGR00886 227 TWILALLYSVTFGSFLGVSSIFAMFFKDQF-GLSKVTAGAYASLGGLLGSLARPLGGAISDRL-GGARKLLMSFLGVAMG 304 (366)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcHHHHHHHHHHHHHHHHHHhhccchHHHhh-ccchhHHHHHHHHHHH
Confidence 444555555555667778888899999989 99999999999999999999999999999995 9999888887777776
Q ss_pred HHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhcccc
Q 009308 118 LVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLR 165 (538)
Q Consensus 118 ~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~ 165 (538)
..++.+....+ .+....++...+.+++.|...+...++.++..|
T Consensus 305 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 348 (366)
T TIGR00886 305 AFLVVLGLVSP----LSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR 348 (366)
T ss_pred HHHHHhcCCCc----chHHHHHHHHHHHHHHhccccchhhhcchhhch
Confidence 66655432110 024445555666666666666677777777764
No 201
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.06 E-value=0.00055 Score=71.26 Aligned_cols=105 Identities=16% Similarity=0.106 Sum_probs=72.9
Q ss_pred HHHHHHHhcccCCCC---C----hHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccc
Q 009308 56 VAVLITYLTDYPRNY---N----VVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEE 128 (538)
Q Consensus 56 ~~~l~~yl~~~l~g~---s----~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~ 128 (538)
...+++|+++.. +- + ++..+...++-.....+..++-|-++|..--||+.+....++.++..+++.....
T Consensus 35 t~ifply~~~~~-~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~-- 111 (438)
T COG2270 35 TFIFPLYFTSVA-GAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPP-- 111 (438)
T ss_pred eehhHHHHHHHH-hhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCC--
Confidence 345677777643 22 2 2444455666677777888999999999734456666666666667766665531
Q ss_pred cccchhHHHHHHHHHHHHHhchhhcccchhhhhccccc
Q 009308 129 AASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRA 166 (538)
Q Consensus 129 ~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~ 166 (538)
+..+....+...+..++..+......++.-|..++
T Consensus 112 ---~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k 146 (438)
T COG2270 112 ---GSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTK 146 (438)
T ss_pred ---CchHHHHHHHHHHHHHhcchhheehhhHhhhhcCc
Confidence 12456667777889999999999999999999765
No 202
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.04 E-value=0.00033 Score=78.01 Aligned_cols=188 Identities=13% Similarity=0.060 Sum_probs=135.6
Q ss_pred cCcCcccccchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCC
Q 009308 23 RFISWISYNICFCKAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSG 102 (538)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lG 102 (538)
.+.+|.|+.... +.+..++....+..--+.+.......-+.+.+ +++.++.|.+.+.+-....+...+-.|.+-|. -
T Consensus 84 ~~~~~~q~~~~~-k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF-~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-H 160 (735)
T KOG3626|consen 84 FRPPGLQRFANI-KMFLVLLSLAAFAQGLYVGYFNSVITTIERRF-KISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-H 160 (735)
T ss_pred cCCccceeccCc-chHHHHHHHHHHHHHhhhhhhhhhhhhhhhhc-CCCCCcceeEeeecccchhhhhHhHHHhcccc-C
Confidence 344455554444 34444444444444444467777777777888 99999999999999999999999999999994 8
Q ss_pred chHHHHHHHHHHHHhHHHHHhhhcccc-------------------------------------cc----c---hhHHHH
Q 009308 103 RLNVIFYSTISCILGLVLLFITAFEEA-------------------------------------AS----P---LLKRLI 138 (538)
Q Consensus 103 r~~~i~~~~~~~~~G~~ll~~~~~~~~-------------------------------------~~----~---~~~~~~ 138 (538)
|=|.|-+|.+++++|.++.++..+... +. . .-+.++
T Consensus 161 rPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llf 240 (735)
T KOG3626|consen 161 RPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLF 240 (735)
T ss_pred ccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHH
Confidence 889999999999999999887643211 00 0 123477
Q ss_pred HHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-----------------
Q 009308 139 LIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL----------------- 201 (538)
Q Consensus 139 ~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~----------------- 201 (538)
+++.++.|+|...+.|--.+|+=|-... ++...+++..|...-+|.++|.++
T Consensus 241 f~~q~l~GIG~Tpi~tlGisYiDDnvk~-----------~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~ 309 (735)
T KOG3626|consen 241 FLGQLLLGIGATPIFTLGISYIDDNVKK-----------KNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIG 309 (735)
T ss_pred HHHHHHhhcCCCCCccCCCccccccccc-----------cCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCC
Confidence 8899999999998888888888776543 233455577777777777777665
Q ss_pred ---------hhhhHHHHHHHHHHHHHHHHHHh
Q 009308 202 ---------SSWRVISTFTVSATGITLFIFRL 224 (538)
Q Consensus 202 ---------~g~~~~F~i~~~~~~l~~~~~~~ 224 (538)
..|+++|++++.+.++..+.++.
T Consensus 310 it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~ 341 (735)
T KOG3626|consen 310 ITPTDPRWIGAWWLGFLICGALLLFSAVPLFF 341 (735)
T ss_pred CCCCCcchhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 35999999988888766665543
No 203
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.96 E-value=0.0011 Score=71.27 Aligned_cols=158 Identities=15% Similarity=0.144 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHHHHhH---HHHHHHhcccCCCCCh-HHHHHHHHHH----HHHHHHHHHHhhhhhhccCCchHHHHHH
Q 009308 39 LILLGLIFSHKLVDIAVV---AVLITYLTDYPRNYNV-VEAARLVNLQ----EGISASTVIFLTCIPDAFSGRLNVIFYS 110 (538)
Q Consensus 39 ~~l~~~~~~er~~~~g~~---~~l~~yl~~~l~g~s~-~~a~~i~~~~----~~~~~~~~l~gG~laD~~lGr~~~i~~~ 110 (538)
..+....+++.|+++... .+...+..... +... ...+...+.. .....+..++-|.++|++ |||..+.+.
T Consensus 21 ~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~-~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~-grk~~L~~~ 98 (463)
T KOG2816|consen 21 RHLEPLLFLYMFSWGLSSTVMTNVILYLACTF-GDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRY-GRKVVLLLP 98 (463)
T ss_pred hHHHHHHHHHHHHHHhcCcchhhhhhhhhccc-ccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhh-hhhhhHHHH
Confidence 445567788888887666 44455554433 2222 3333333333 456788899999999996 999999999
Q ss_pred HHHHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhc--hhhcccchhhhhccccccCccccCcccccceeeeehhhH
Q 009308 111 TISCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGK--AGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWL 188 (538)
Q Consensus 111 ~~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~--g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y 188 (538)
.....++-+.+.+.. + ++++ +.++.. +.+.....++++|.... ++| ...+.+..
T Consensus 99 ~~~~~l~~~~~~~~~---------~-~~~~---~~~l~g~~~~~~s~~~a~vadis~~--------~~R---~~~~gll~ 154 (463)
T KOG2816|consen 99 LFGTILPALCLLFQG---------Y-WFFL---LLGLSGGFSAIFSVGFAYVADISSE--------EER---SSSIGLLS 154 (463)
T ss_pred HHHHHHhHHHHHHHH---------H-HHhh---hcccccchhhhhhhhhhheeeccch--------hHH---HHHHHHHH
Confidence 999998887777653 2 2222 444433 34666777789998654 233 33333333
Q ss_pred HHHHHHHHHHHHh-------hhhhHHHHHHHHHHHHHHHHH
Q 009308 189 IPFFFSVIASVQL-------SSWRVISTFTVSATGITLFIF 222 (538)
Q Consensus 189 ~~~niG~~i~~~~-------~g~~~~F~i~~~~~~l~~~~~ 222 (538)
-+.-.|..+++.+ .|+...|.++++..+++.+..
T Consensus 155 ~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~ 195 (463)
T KOG2816|consen 155 GTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYM 195 (463)
T ss_pred HHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 3333344444443 677788888887777666643
No 204
>TIGR00898 2A0119 cation transport protein.
Probab=97.93 E-value=0.00032 Score=76.33 Aligned_cols=122 Identities=14% Similarity=0.001 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhh
Q 009308 81 LQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFL 160 (538)
Q Consensus 81 ~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ 160 (538)
........+.++++++.||+ |||+++.++.++..++.+++...... ......+..++.+++.++..+...++.
T Consensus 363 ~~~~~~i~~~~~~~~l~dr~-grr~~~~~~~~~~~~~~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (505)
T TIGR00898 363 ISGLVELPAKLITLLLIDRL-GRRYTMAASLLLAGVALLLLLFVPVD------LYFLRTALAVLGKFGITSAFQMVYLYT 435 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHcCCC------chHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34556677888999999995 99999999998888877766554311 123344445566667777778888999
Q ss_pred hccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-----hhhhHHHHHHHHHHHHHHH
Q 009308 161 ADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL-----SSWRVISTFTVSATGITLF 220 (538)
Q Consensus 161 ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~-----~g~~~~F~i~~~~~~l~~~ 220 (538)
+|.+|. ..+....++......+|.++++.+ .++...|.+.++..+++.+
T Consensus 436 ~e~~p~-----------~~r~~~~g~~~~~~~ig~~i~p~i~~~~~~~~~~~~~~~~~~~~~~~~ 489 (505)
T TIGR00898 436 AELYPT-----------VVRNLGVGVCSTMARVGSIISPFLVYLGEKWLFLPLVLFGGLALLAGI 489 (505)
T ss_pred cccccH-----------HHHhhhHhHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 999986 234556677777888999998876 3445556555444444433
No 205
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=97.93 E-value=0.00017 Score=78.69 Aligned_cols=139 Identities=10% Similarity=-0.071 Sum_probs=82.9
Q ss_pred HHHHHHHHHHhHHHHHHHhcccCCCCChHHHHH------------HHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHH
Q 009308 45 IFSHKLVDIAVVAVLITYLTDYPRNYNVVEAAR------------LVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTI 112 (538)
Q Consensus 45 ~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~------------i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~ 112 (538)
.++.-+.+|++...++.+++ .+ |++..+++. ..........++.+++++++||+ |||+++.++..
T Consensus 297 ~~~~~~~~y~~~~~~p~i~~-~~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~-gRR~~l~~~~~ 373 (502)
T TIGR00887 297 WFLLDIAFYGVNLNQKVILS-AI-GYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII-GRKPIQLMGFF 373 (502)
T ss_pred HHHHHHHHHccccccHHHHH-HH-cCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cchhHHHHHHH
Confidence 34455678887777777775 46 766543221 12223344556778899999995 99999998888
Q ss_pred HHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHH
Q 009308 113 SCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFF 192 (538)
Q Consensus 113 ~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~n 192 (538)
+..++.+++.+..... .....+....+...++..+..+....+.+|.+|. ..|....++.....+
T Consensus 374 ~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~-----------~~R~~~~g~~~~~~~ 438 (502)
T TIGR00887 374 ILTVLFFVLGFAYNHL----STHGFLAIYVLAQFFANFGPNATTFIVPGEVFPT-----------RYRSTAHGISAASGK 438 (502)
T ss_pred HHHHHHHHHHHHHHhc----chhHHHHHHHHHHHHHhcCCCchhhhhhhccCch-----------hHHHHHHHHHHHHhh
Confidence 8877766655432100 0011111111112222222345566777999886 245566677777788
Q ss_pred HHHHHHHHh
Q 009308 193 FSVIASVQL 201 (538)
Q Consensus 193 iG~~i~~~~ 201 (538)
+|+++++.+
T Consensus 439 ~~~~~~~~~ 447 (502)
T TIGR00887 439 AGAIIGQFG 447 (502)
T ss_pred hHHHHHHHH
Confidence 888888765
No 206
>PRK11043 putative transporter; Provisional
Probab=97.92 E-value=0.00052 Score=72.24 Aligned_cols=134 Identities=7% Similarity=-0.048 Sum_probs=88.1
Q ss_pred HHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhcccc
Q 009308 50 LVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEA 129 (538)
Q Consensus 50 ~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~ 129 (538)
..++.....++.|++ +. |++..+++...........++.++++++.||+ |+|+++....+...++.+.+........
T Consensus 217 ~~~~~~~~~~p~~~~-~~-g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (401)
T PRK11043 217 AAFFAWLTGSPFILE-QM-GYSPADIGLSYVPQTIAFLVGGYGCRAALQKW-GGEQLLPWLLVLFAVSVIAIWLASLLSH 293 (401)
T ss_pred HHHHHHHHHhHHHHH-Hc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 445555556667775 48 99999999888777788888999999999995 9999887776666655443332221000
Q ss_pred ccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh
Q 009308 130 ASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL 201 (538)
Q Consensus 130 ~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~ 201 (538)
.......++..+.+++.|...|...+...|..|+ .+.+..+++....+.++..++.+
T Consensus 294 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~g~~~g~~~~~~~~~~~~~~~~ 350 (401)
T PRK11043 294 ---PSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQ------------ATGKAAALQNTLQLGLCFLASLL 350 (401)
T ss_pred ---CcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcc------------cChHHHHHHHHHHHHHHHHHHHH
Confidence 1234455666778889998888888877776543 23344455444445555555544
No 207
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=97.91 E-value=0.00011 Score=80.10 Aligned_cols=169 Identities=11% Similarity=0.009 Sum_probs=132.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHH--
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTIS-- 113 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~-- 113 (538)
+.++.+.....+..++|+--.-.++.|.. .. ++++.+++.+++.......++.++.|+++|+. ..++.......+
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~-g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~-~~~~~~~~~~~ll~ 374 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAK-SL-GLSSNDAAFLLSIIGVSDIIGRIILGLLADKP-GIRALVLFLLTLLI 374 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh-hc-CCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc-ccchHHHHHHHHHH
Confidence 56777788888999999988888888888 58 89999999999999999999999999999995 533433333333
Q ss_pred HHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHH
Q 009308 114 CILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFF 193 (538)
Q Consensus 114 ~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~ni 193 (538)
..+....+.+.. ++..+...-.+.|++.|.+....+..+.|..+. .+..+++++..+...+
T Consensus 375 ~gl~~~~~p~~~--------~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~-----------~~l~~a~Gl~l~~~gi 435 (509)
T KOG2504|consen 375 AGLARLFLPFAT--------TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGL-----------EKLSNAYGLLLLFQGI 435 (509)
T ss_pred HHHHHHHHHHhc--------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCh-----------hhcchHHHHHHHHhHH
Confidence 343443333332 456677777788999999888888888898865 3678889998999999
Q ss_pred HHHHHHHh--------hhhhHHHHHHHHHHHHHHHHHHhcc
Q 009308 194 SVIASVQL--------SSWRVISTFTVSATGITLFIFRLGI 226 (538)
Q Consensus 194 G~~i~~~~--------~g~~~~F~i~~~~~~l~~~~~~~~~ 226 (538)
+.++|+-+ -+|...|..+.+.++++..+++..+
T Consensus 436 ~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 436 GALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 99999776 3488999999888888887666544
No 208
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.88 E-value=0.00021 Score=76.09 Aligned_cols=155 Identities=12% Similarity=0.047 Sum_probs=118.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHH
Q 009308 35 CKAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISC 114 (538)
Q Consensus 35 ~~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~ 114 (538)
.|++.++++..++.-.++.-..+.++.|.+..+ |.++..+............++.++...+.+| +|||++..++.++.
T Consensus 235 Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~l-g~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~-~gkk~~~~~~~~~~ 312 (467)
T COG2211 235 NRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVL-GDPELFAYLLLLASGAGLLIGLILWPRLVKK-FGKKKLFLIGLLLL 312 (467)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhhhheeEEEEc-CChHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hchHHHHHHHHHHH
Confidence 366666777777777777766666677778788 8888888888888888888889999999999 59999999999999
Q ss_pred HHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHH
Q 009308 115 ILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFS 194 (538)
Q Consensus 115 ~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG 194 (538)
+++.+++.+... .+..+.++..++.++|.+...+...++++|..+-. +. +.++| +-+-.|+.+.+..=+|
T Consensus 313 ~i~~~~~~f~~~------~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyg-e~--~TG~R-~eGi~~s~~tF~~K~g 382 (467)
T COG2211 313 AVGYLLLYFTPA------GSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYG-EW--KTGVR-REGIVYSGMTFFRKLG 382 (467)
T ss_pred HHHHHHHHhhcC------cchHHHHHHHHHHHHHhhccccccHHHhcchhhHH-HH--HhCCC-chhhHHHHHHHHHHHH
Confidence 999999888752 25778889999999999999999999999997641 00 11222 1123445555666667
Q ss_pred HHHHHHh
Q 009308 195 VIASVQL 201 (538)
Q Consensus 195 ~~i~~~~ 201 (538)
..++..+
T Consensus 383 ~ala~~~ 389 (467)
T COG2211 383 LALAGFI 389 (467)
T ss_pred HHHHHHH
Confidence 6666544
No 209
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=97.88 E-value=0.00032 Score=74.58 Aligned_cols=153 Identities=11% Similarity=-0.075 Sum_probs=105.1
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhcc-cCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHH
Q 009308 41 LLGLIFSHKLVDIAVVAVLITYLTD-YPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLV 119 (538)
Q Consensus 41 l~~~~~~er~~~~g~~~~l~~yl~~-~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ 119 (538)
.....++--.+..++.+.++.|+.+ .. +.+...++...+.+.....++.+++|+++||+ +++|.+.+...+.++..+
T Consensus 237 ~~l~~f~yvg~e~~~~s~l~~y~~~~~~-~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~-~~~~~l~i~~~~~~~~~l 314 (410)
T TIGR00885 237 GVIAQFFYVGVQIMCWTFIIQYAVRLIP-GMTAGFAANYNIGAMVIFFISRFIGTWLISYL-AAHKVLMAYAIIGMALCL 314 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHH
Confidence 3344555444555677888999875 33 55566667677777788899999999999995 999998888888887776
Q ss_pred HHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHH
Q 009308 120 LLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASV 199 (538)
Q Consensus 120 ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~ 199 (538)
+..... +. ...+...+.++..+.+.|.+.+...+..+++ . ...-....+++ +|..+.|
T Consensus 315 l~~~~~--------~~-~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~-----------~-~~~s~~l~~~~-~Gga~~p 372 (410)
T TIGR00885 315 GSIFAG--------GH-VGLYCLTLCSAFMSLMFPTIYGIALKGLGQD-----------T-KYGAAGLVMAI-IGGGIVP 372 (410)
T ss_pred HHHHcC--------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh-----------h-hhhHHHHHHHH-hccchHH
Confidence 666543 12 2356677888888888899999999988651 1 11112223333 7777776
Q ss_pred Hh-------h------hhhHHHHHHHHHHHH
Q 009308 200 QL-------S------SWRVISTFTVSATGI 217 (538)
Q Consensus 200 ~~-------~------g~~~~F~i~~~~~~l 217 (538)
.+ . |.+..|.++.++.+.
T Consensus 373 ~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~~ 403 (410)
T TIGR00885 373 PLQGFIIDMKEIAAAPAVNTSFILPLLCFAV 403 (410)
T ss_pred HHHHHHHHHhcccccCccchHHHHHHHHHHH
Confidence 65 2 467778877666654
No 210
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.88 E-value=0.00041 Score=72.18 Aligned_cols=157 Identities=15% Similarity=0.091 Sum_probs=120.4
Q ss_pred HHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhcccc
Q 009308 50 LVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEA 129 (538)
Q Consensus 50 ~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~ 129 (538)
++|.+=-..|-+|--+-+ |++..+.+.+...|.++..++-.+.|++..+..|++++..+++...+++..++.+++...
T Consensus 222 ~a~~~QD~iLEPygg~Vf-gmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~- 299 (403)
T PF03209_consen 222 LAFFMQDVILEPYGGEVF-GMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLG- 299 (403)
T ss_pred HHHHhhHHHcCCchhHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence 344433334456776778 999999999999999999999999999999778999999999999999999888876543
Q ss_pred ccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHH----HHHHHHHHHh----
Q 009308 130 ASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPF----FFSVIASVQL---- 201 (538)
Q Consensus 130 ~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~----niG~~i~~~~---- 201 (538)
+.+.+..+.+++|+|.|.+.....+...|..++ +. -.-+...|.... .+|.++|..+
T Consensus 300 ----~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~--------~~---aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~ 364 (403)
T PF03209_consen 300 ----SPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSA--------GR---AGLFMGAWGAAQAIARGLGTFLGGALRDLV 364 (403)
T ss_pred ----cchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCC--------cc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999999999999998754 11 123334444443 3444454443
Q ss_pred ---------hhhhHHHHHHHHHHHHHHHHHH
Q 009308 202 ---------SSWRVISTFTVSATGITLFIFR 223 (538)
Q Consensus 202 ---------~g~~~~F~i~~~~~~l~~~~~~ 223 (538)
.+|..+|.+-++.+++++.+..
T Consensus 365 ~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~ 395 (403)
T PF03209_consen 365 RALFGNSPALAYGVVFALEAVLLLAALVLLG 395 (403)
T ss_pred HHhccCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 4688889988888887776544
No 211
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=97.87 E-value=0.00067 Score=71.04 Aligned_cols=159 Identities=13% Similarity=-0.009 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCch---HH-HHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRL---NV-IFYST 111 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~---~~-i~~~~ 111 (538)
+.+|.+....++.-.++|++..-++.|+++ . |++.. ++.......... .+..++++||. .|| +. +....
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~-g~s~~-~~~~~~l~~~~g---~~g~~~~~d~~-~r~~~r~~~~~~~~ 264 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALRP-A-GLEDI-AGDAVALAILAG---LIGVAVIPDRV-ARAGLRSIYIRAAA 264 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-C-CCChH-HHHHHHHHHHHH---HHHHHHhhHHh-hhhhhHHHHHHHHH
Confidence 667888888999999999999999999965 6 77764 555444443333 34458899984 543 33 22233
Q ss_pred HHHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHH
Q 009308 112 ISCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPF 191 (538)
Q Consensus 112 ~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~ 191 (538)
.+..++..++..+. +.....+...+.+++.+...+...++.+|.+|+ +.+....++.+...
T Consensus 265 ~~~a~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~-----------~~rgt~~G~~~~~g 325 (368)
T TIGR00903 265 LLIAAFFLALAFEL--------NRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDK-----------ELHGKAAGAIGFTS 325 (368)
T ss_pred HHHHHHHHHHHHcc--------ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcch-----------hhcCcccchhhHHH
Confidence 33333333333222 122334445556666666777788999999987 24567778888889
Q ss_pred HHHHHHHHHh-----hhhhHHHHHHHHHHHHHHH
Q 009308 192 FFSVIASVQL-----SSWRVISTFTVSATGITLF 220 (538)
Q Consensus 192 niG~~i~~~~-----~g~~~~F~i~~~~~~l~~~ 220 (538)
++|+.+++.+ .|....|.+-++..+++.+
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~~ 359 (368)
T TIGR00903 326 RAISVALALAAMLFISSAEAYFTFLAILITIAFA 359 (368)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 9999888776 2445555554444444443
No 212
>PRK11462 putative transporter; Provisional
Probab=97.86 E-value=0.00055 Score=73.93 Aligned_cols=153 Identities=8% Similarity=-0.037 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
|.+..++...++..++.....+....|.+..+ +. ....+.+...+...+.++.+++++++||+ |||+++..+..+..
T Consensus 228 k~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~-g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~-gkk~~~~~~~~~~~ 304 (460)
T PRK11462 228 DQWRIVGLLTIFNILAVCVRGGAMMYYVTWIL-GT-PEVFVAFLTTYCVGNLIGSALAKPLTDWK-CKVTIFWWTNALLA 304 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhc-CC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHH
Confidence 55566666677777777655566665665545 43 33445566777788888999999999995 99988776655544
Q ss_pred HhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHH
Q 009308 116 LGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSV 195 (538)
Q Consensus 116 ~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~ 195 (538)
+..+++.+... .+...+++..++.+++.+...+...++.+|..+.+|- +.++| +-..+++.+.+..++|.
T Consensus 305 ~~~~~~~~~~~------~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~---~tG~r-~~g~~~a~~~f~~Klg~ 374 (460)
T PRK11462 305 VISLAMFFVPM------QASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEW---CNGKR-LTGISFAGTLFVLKLGL 374 (460)
T ss_pred HHHHHHHHhch------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHH---hcCCC-chHHHHHHHHHHHHHHH
Confidence 43333322211 1222344455667888888888778899998764110 11222 11223455566777777
Q ss_pred HHHHHh
Q 009308 196 IASVQL 201 (538)
Q Consensus 196 ~i~~~~ 201 (538)
.++..+
T Consensus 375 alg~~i 380 (460)
T PRK11462 375 AFGGAL 380 (460)
T ss_pred HHHHHH
Confidence 777654
No 213
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=97.77 E-value=0.0029 Score=64.67 Aligned_cols=57 Identities=14% Similarity=0.025 Sum_probs=45.9
Q ss_pred hHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh
Q 009308 134 LKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL 201 (538)
Q Consensus 134 ~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~ 201 (538)
+++.++++.++.|.|.+...+..++++++.-++ ++ ..+..++...+..+|.+++|.+
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~--------~~---~~~~l~~~~~~~~~G~~~gP~i 65 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGPI--------ET---AASRLALTQAFNKLGTTVAPLF 65 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCc--------ch---HHHHHHHHHHHhhhHHHHHHHH
Confidence 578899999999999999999999999999765 22 2333466666778888888876
No 214
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.76 E-value=0.00032 Score=75.58 Aligned_cols=181 Identities=16% Similarity=0.104 Sum_probs=112.9
Q ss_pred CcCcccccchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCc
Q 009308 24 FISWISYNICFCKAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGR 103 (538)
Q Consensus 24 ~~~~~~~~~~~~~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr 103 (538)
+.+|++. -....+|.++.+.+++..+++-+...++.|+++-| |++..+.|.+.++-.....+..+++|.++|+...|
T Consensus 248 ~vP~~~i--~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL-~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~ 324 (466)
T KOG2532|consen 248 PVPYKAI--LTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVL-GFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFR 324 (466)
T ss_pred CCCHHHH--HcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHh-CCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 4455433 33467799999999999999999999999999999 99999999999999999999999999999996331
Q ss_pred ------hHHHHHHHHHHHHhHHHHHhhhccccccc-hhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCccc
Q 009308 104 ------LNVIFYSTISCILGLVLLFITAFEEAASP-LLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISE 176 (538)
Q Consensus 104 ------~~~i~~~~~~~~~G~~ll~~~~~~~~~~~-~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~ 176 (538)
++-+.-+......+..++.+ +..+.+.. .....+.++..+.|+..+++..|. .|..|.
T Consensus 325 ~ls~t~~rkifn~i~~~~~ai~l~~l-~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~----~~~apq---------- 389 (466)
T KOG2532|consen 325 ILSETTVRKIFNTIAFGGPAVFLLVL-AFTSDEHRLLAVILLTIAIGLSGFNISGFYKNH----QDIAPQ---------- 389 (466)
T ss_pred cCchHhHHHHHHhHHHHHHHHHHHee-eecCCCcchHHHHHHHHHHHHcccchhhhHhhh----hhccch----------
Confidence 11121111112222222222 22111111 112222333333444444333322 111111
Q ss_pred ccceeeeehhhHHHHHHHHHHHHHh----------hhhhHHHHHHHHHHHHHHHHHHh
Q 009308 177 HRVSARKRVWWLIPFFFSVIASVQL----------SSWRVISTFTVSATGITLFIFRL 224 (538)
Q Consensus 177 r~~~~~~f~~~y~~~niG~~i~~~~----------~g~~~~F~i~~~~~~l~~~~~~~ 224 (538)
.-.-..+......++..+++|.+ -.|+..|.+.++.++++-++|.+
T Consensus 390 --~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~ 445 (466)
T KOG2532|consen 390 --HAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLF 445 (466)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeE
Confidence 11223344455667777777776 38999999999999888876654
No 215
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.74 E-value=0.015 Score=62.06 Aligned_cols=88 Identities=15% Similarity=0.053 Sum_probs=65.3
Q ss_pred hhHhHHHHHHHHHHHHHHhhhhHHHHHhhCCcchhhHHHHHHHHHHHHHHHHHHHhhhcccccccccCCCcchhHHHHHH
Q 009308 412 IFWLAPQFCLLGLMKGLARDGINKFLADQFPEPMHDCVSAITELVTGFASFVNIVSVYFNKSLFADTLNSSRLDEYYKML 491 (538)
Q Consensus 412 ~~~li~~~~l~glgE~l~~p~~~~~~~~~aP~~~rg~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~n~~~l~~~f~~l 491 (538)
...-...+++.|+||......-+..+.... ++.|..+-+++-+..++++.++-....... +.++...+
T Consensus 353 ~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~~~-----------l~~~~l~~ 420 (461)
T KOG3098|consen 353 YYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPYLL-----------LYIYTLGL 420 (461)
T ss_pred hhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhhhH-----------HHHHHHHH
Confidence 333445568999999999999999999999 667778899999999998887665554111 22334556
Q ss_pred HHHHHHHHHHHHhhhccccc
Q 009308 492 TIVSFINICYFWWISTFYTR 511 (538)
Q Consensus 492 a~l~~v~~~~~~~~~~~~~~ 511 (538)
.+++.+...++....++++.
T Consensus 421 ~i~~~i~~~~~~~~~~~~~~ 440 (461)
T KOG3098|consen 421 PIFCVIATTIFFIVAERTQA 440 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 67777888888888877753
No 216
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.72 E-value=0.001 Score=71.54 Aligned_cols=131 Identities=15% Similarity=0.112 Sum_probs=86.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHH
Q 009308 34 FCKAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTIS 113 (538)
Q Consensus 34 ~~~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~ 113 (538)
+-+.....+...++..++=.-........+...- |.+..+|.+.....+....++.+++.++-||+ |||+.++.+..+
T Consensus 267 lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~a-G~~~~~a~~an~~~g~v~~~~t~~~~~lid~~-gRRpLll~~~~~ 344 (485)
T KOG0569|consen 267 LRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTA-GFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL-GRRPLLLISLSL 344 (485)
T ss_pred hhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHH
Confidence 3344555556666666652212222223333346 89999999999999999999999999999995 999999999999
Q ss_pred HHHhHHHHHhhhccccccc-hhHHHHHHHHHHHHHhchh-hcccchhhhhccccc
Q 009308 114 CILGLVLLFITAFEEAASP-LLKRLILIGVVLLAVGKAG-MQHFLGPFLADQLRA 166 (538)
Q Consensus 114 ~~~G~~ll~~~~~~~~~~~-~~~~~~~~~l~l~g~g~g~-~~~~~~~~~ad~~~~ 166 (538)
+.+..+++.+......... .-....+++.++..++.+. .-|...-+++|.+|.
T Consensus 345 ~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~ 399 (485)
T KOG0569|consen 345 MAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQ 399 (485)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCc
Confidence 9988777776543322110 0011223444444444333 457777788999986
No 217
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=97.61 E-value=0.001 Score=72.24 Aligned_cols=175 Identities=7% Similarity=-0.003 Sum_probs=113.5
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCCh----HHHHHHHHHHHHHHHHHHHHhh----hhhhccCCchHHH--H
Q 009308 39 LILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNV----VEAARLVNLQEGISASTVIFLT----CIPDAFSGRLNVI--F 108 (538)
Q Consensus 39 ~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~----~~a~~i~~~~~~~~~~~~l~gG----~laD~~lGr~~~i--~ 108 (538)
..++....+-...|.-+.+.++.|..+.. +.+. ...+++.+.-.....+..++-. .+.||..+.+... .
T Consensus 275 l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~-~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~ 353 (475)
T TIGR00924 275 IVLFLEAVVFWVLYAQMPTSLNFFADNNM-HHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFT 353 (475)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHhc-cccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHH
Confidence 33444444555667667777888877654 3321 1255666655555555554433 4556522333333 6
Q ss_pred HHHHHHHHhHHHHHhhhcccc-ccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhh
Q 009308 109 YSTISCILGLVLLFITAFEEA-ASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWW 187 (538)
Q Consensus 109 ~~~~~~~~G~~ll~~~~~~~~-~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~ 187 (538)
+|.++..+|.+.+.+...... ....+.+++.+..++.++|..+..|...++++++.|+ +.++++.+.+
T Consensus 354 ~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~-----------~~~g~~~g~~ 422 (475)
T TIGR00924 354 LGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQ-----------RLMGQMLGMW 422 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCH-----------HHHHHHHHHH
Confidence 788888888877665311100 0123577889999999999999999999999999876 2456777888
Q ss_pred HHHHHHHHHHHHHh-------hhhhHHHHHHHHHHHHHHHHHHhc
Q 009308 188 LIPFFFSVIASVQL-------SSWRVISTFTVSATGITLFIFRLG 225 (538)
Q Consensus 188 y~~~niG~~i~~~~-------~g~~~~F~i~~~~~~l~~~~~~~~ 225 (538)
+++..+|..++..+ .+|...|...++..++..++++..
T Consensus 423 ~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (475)
T TIGR00924 423 FLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALM 467 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHH
Confidence 88889999888665 356667776666666555555443
No 218
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=97.60 E-value=0.0025 Score=66.88 Aligned_cols=127 Identities=13% Similarity=0.057 Sum_probs=83.0
Q ss_pred HHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhH
Q 009308 56 VAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLK 135 (538)
Q Consensus 56 ~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~ 135 (538)
......|+++.+ |++..+.+.+......+..++.++.+++.||+ ||+ ...+.....++.+++....... ..+.
T Consensus 227 ~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~ 299 (394)
T PRK11652 227 EACSGVLMGAVL-GLSSMTVSILFILPIPAAFFGAWFAGRPNKRF-STL--MWQSVICCLLAGLLMWIPGWFG---VMNV 299 (394)
T ss_pred HHhChHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH--HHHHHHHHHHHHHHHHHHHHhc---cccH
Confidence 334456777778 99999999988777777778888888888885 632 2333333333333222211100 0123
Q ss_pred HHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh
Q 009308 136 RLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL 201 (538)
Q Consensus 136 ~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~ 201 (538)
+.+..+..+.++|.|...|...++..|..|+ .+......+....++|..+++.+
T Consensus 300 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~------------~~g~~~~~~~~~~~lg~~~~~~~ 353 (394)
T PRK11652 300 WTLLVPAALFFFGAGMLFPLATSGAMEPFPY------------LAGTAGALLGGLQNIGSGLAALL 353 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccc------------cchHHHHHHHHHHHHHHHHHHHH
Confidence 4567778889999999999999998887653 12333455566678888888876
No 219
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.51 E-value=0.00076 Score=53.87 Aligned_cols=62 Identities=16% Similarity=0.163 Sum_probs=53.0
Q ss_pred HHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHH
Q 009308 50 LVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISC 114 (538)
Q Consensus 50 ~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~ 114 (538)
.+...+.+.++.|+++ . |++..+.|.+.++-.....+++++.|+++||+ ||+|.+..+..++
T Consensus 14 ~~~g~~~Pfl~~~~~~-~-Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 14 AALGCLYPFLPLYLKQ-L-GLSPSQIGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHhhhhHhhhh-c-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHHHHHHH
Confidence 3555677778888875 8 99999999999999999999999999999996 8888887766554
No 220
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=97.49 E-value=0.0018 Score=66.32 Aligned_cols=149 Identities=13% Similarity=0.025 Sum_probs=94.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCC-CC---------------ChHHHHHH--HHHHHHHHHHHHHHhh
Q 009308 33 CFCKAALILLGLIFSHKLVDIAVVAVLITYLTDYPR-NY---------------NVVEAARL--VNLQEGISASTVIFLT 94 (538)
Q Consensus 33 ~~~~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~-g~---------------s~~~a~~i--~~~~~~~~~~~~l~gG 94 (538)
.+-+.-..++..-+.++|+|||+.-..+-..+.+.- |. ....+.-. +-.-++.-+.+.++.|
T Consensus 323 ~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~ 402 (528)
T KOG0253|consen 323 KLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITG 402 (528)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHH
Confidence 333444666677788999999987665544442110 00 01111111 2233556677889999
Q ss_pred hhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCc
Q 009308 95 CIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNI 174 (538)
Q Consensus 95 ~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~ 174 (538)
++.|| +|||+|+....+++.+.++++...-.. +.-..+++.+|+++..+.+ +.+.|.-|.||.
T Consensus 403 ~iver-lGRKkTMal~l~~f~iflfll~~c~~r----n~~tvllf~arafisg~fq----vaYvYtPEVyPT-------- 465 (528)
T KOG0253|consen 403 VIVER-LGRKKTMALSLILFGIFLFLLTTCKTR----NAYTVLLFTARAFISGAFQ----VAYVYTPEVYPT-------- 465 (528)
T ss_pred HHHHH-hcchhHHHHHHHHHHHHHHHHHHhcCc----chhHHHHHHHHHHHhchhe----EEEEecCcccch--------
Confidence 99999 699999999999999988777765321 1123467778887765544 677888888886
Q ss_pred ccccceeeeehhhHHHHHHHHHHHHHh
Q 009308 175 SEHRVSARKRVWWLIPFFFSVIASVQL 201 (538)
Q Consensus 175 ~~r~~~~~~f~~~y~~~niG~~i~~~~ 201 (538)
..|....+.-.-..-+|++++|.+
T Consensus 466 ---avRatgvGtcSsmaRIggI~~p~i 489 (528)
T KOG0253|consen 466 ---AVRATGVGTCSSMARIGGIFSPVI 489 (528)
T ss_pred ---hhhhcchhhhhhHHhhhhhhhhHH
Confidence 122333333333455888888766
No 221
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.45 E-value=0.00052 Score=70.77 Aligned_cols=116 Identities=17% Similarity=0.081 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCccchhhHhHHHHHHHHHHHHHHhhhhHHHHHhhCCcch-hh
Q 009308 369 RIWAGMVLSTICCAVAWRVEVHRLIIINNKGLLGNTDEVIPMSIFWLAPQFCLLGLMKGLARDGINKFLADQFPEPM-HD 447 (538)
Q Consensus 369 ri~iG~~l~~l~~~~~~~~e~~~~~~~~~~g~~~~~~~~~~~s~~~li~~~~l~glgE~l~~p~~~~~~~~~aP~~~-rg 447 (538)
-|.+|++++..+-++.++.+ |...++.+=.++|+|..+++..+++++.+.-|++. ||
T Consensus 138 pm~~Gl~vmf~sTilFafg~----------------------sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~ 195 (464)
T KOG3764|consen 138 PMVAGLFVMFLSTILFAFGN----------------------SYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNERG 195 (464)
T ss_pred HHHHHHHHHHHHHHHHHHcc----------------------hhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchhhh
Confidence 35688888888877766642 33356677789999999999999999999999987 59
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh-cccccccccCCCcchhHHHHHHHHHHHHHHHHHHhhhcccccCCC
Q 009308 448 CVSAITELVTGFASFVNIVSVY-FNKSLFADTLNSSRLDEYYKMLTIVSFINICYFWWISTFYTRGGD 514 (538)
Q Consensus 448 ~~~gl~~l~~~iG~~l~~~l~~-~~~~~~~~~~n~~~l~~~f~~la~l~~v~~~~~~~~~~~~~~~~~ 514 (538)
.+||+-....++|..+||.+++ +++ . . | ..--|.++++++++...+-+++.+.++.+++
T Consensus 196 ~vmGialgfislG~lvgPpfGGilYe-~----~--G-k~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~ 255 (464)
T KOG3764|consen 196 SVMGIALGFISLGVLVGPPFGGILYE-F----A--G-KSAPFLVLAIVLLLDGALQLLVIEPTEMDPD 255 (464)
T ss_pred HHHHHHHHHHhccceecCCcccchHh-h----c--C-CcCcHHHHHHHHHHHHHHHHheeCccccCcc
Confidence 9999999999999999999999 665 1 1 1 1123899999999999998888877766554
No 222
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.38 E-value=0.0044 Score=60.45 Aligned_cols=146 Identities=16% Similarity=0.122 Sum_probs=97.6
Q ss_pred HHHHHhHHHHHHHhcccCCCCCh--HHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhcc
Q 009308 50 LVDIAVVAVLITYLTDYPRNYNV--VEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFE 127 (538)
Q Consensus 50 ~~~~g~~~~l~~yl~~~l~g~s~--~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~ 127 (538)
++.......+..+..+ + +.+. ...+...+.+.....++.++.|.++||+ |||+.+..+.....++.++..+...
T Consensus 16 ~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~- 91 (338)
T COG0477 16 LDLGLLSPALPLLLST-L-SLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLLGTLLLALAPN- 91 (338)
T ss_pred HhcchHHHHHHHHHHH-c-CCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHHHHHHHHhCcc-
Confidence 3443333444444443 4 3444 4788888999888888899999999997 9998888888776666555444431
Q ss_pred ccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHH-HHHHHHHHHHHh-----
Q 009308 128 EAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLI-PFFFSVIASVQL----- 201 (538)
Q Consensus 128 ~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~-~~niG~~i~~~~----- 201 (538)
.....+.+.|.+.|++.|...+...++++|.+++ +.++....+.... ..++|..+++.+
T Consensus 92 -----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (338)
T COG0477 92 -----VGLALLLILRLLQGLGGGGLLPVASALLSEWFPE----------ATERGLAVGLVTLGAGALGLALGPLLAGLLL 156 (338)
T ss_pred -----chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCc----------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1366888899999999999999999999999752 0122333444444 355666666543
Q ss_pred -h---hhhHHHHHHHHH
Q 009308 202 -S---SWRVISTFTVSA 214 (538)
Q Consensus 202 -~---g~~~~F~i~~~~ 214 (538)
. +|+..|.+....
T Consensus 157 ~~~~~~~~~~~~~~~~~ 173 (338)
T COG0477 157 GALLWGWRAAFLLAALL 173 (338)
T ss_pred HHHhcchHHHHHHHHHH
Confidence 2 677755544333
No 223
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=97.37 E-value=0.0045 Score=53.57 Aligned_cols=59 Identities=14% Similarity=0.051 Sum_probs=53.4
Q ss_pred hhhHhHHHHHHHHHHHHHHhhhhHHHHHhhCCcchhhHHHHHHHHHHHHHHHHHHHhhh
Q 009308 411 SIFWLAPQFCLLGLMKGLARDGINKFLADQFPEPMHDCVSAITELVTGFASFVNIVSVY 469 (538)
Q Consensus 411 s~~~li~~~~l~glgE~l~~p~~~~~~~~~aP~~~rg~~~gl~~l~~~iG~~l~~~l~~ 469 (538)
+.+++....++.+++.....+....++.+..|++.|+..+|+......+|..+++.+.+
T Consensus 50 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 108 (141)
T TIGR00880 50 NITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGG 108 (141)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHH
Confidence 34556667789999999999999999999999999999999999999999999999988
No 224
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=97.33 E-value=0.0072 Score=64.05 Aligned_cols=177 Identities=12% Similarity=0.090 Sum_probs=114.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHH
Q 009308 34 FCKAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTIS 113 (538)
Q Consensus 34 ~~~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~ 113 (538)
-|+-..+++ ..++...+.-........|+++.- +.+...++.+.+.-...=.+.=.+.+++..|+ |-++++.++.+.
T Consensus 206 ~~~~~~Fll-~~~l~~~~~~~~~~f~~~yl~~~g-g~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~-g~~~ll~~a~~~ 282 (400)
T PF03825_consen 206 NPRFLVFLL-AAFLIGISHAAYYTFFSIYLQELG-GYSGSTIGILWALGVVAEIPFFFFSGRFLKRF-GIKWLLLLALVA 282 (400)
T ss_pred CccHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcc-cchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHH
Confidence 344444444 334445555555667788998733 36777777666655555566667889999995 999999999999
Q ss_pred HHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehh--hHHHH
Q 009308 114 CILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVW--WLIPF 191 (538)
Q Consensus 114 ~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~--~y~~~ 191 (538)
+++=+.+++..+.++ .........+-.++|+..|.+-+....++.+..|+ +.|.+-+..++. +.++.
T Consensus 283 ~~vR~~l~a~~~~~~---~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~--------~~~at~Q~l~~~~~~Glg~ 351 (400)
T PF03825_consen 283 YAVRWLLYAYFSDPW---PFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPP--------ELRATAQGLYSALSFGLGG 351 (400)
T ss_pred HHHHHHHHHHhcCCc---HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCc--------cchHHHHHHHHHHHhhHHH
Confidence 999877777653211 00112233445679999999999999999999886 233344444433 23455
Q ss_pred HHHHHHHHHh---------hhhhHHHHHHHHHHHHHHHHHHh
Q 009308 192 FFSVIASVQL---------SSWRVISTFTVSATGITLFIFRL 224 (538)
Q Consensus 192 niG~~i~~~~---------~g~~~~F~i~~~~~~l~~~~~~~ 224 (538)
-+|++++..+ +.|...|.++++..++..++|..
T Consensus 352 ~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~ 393 (400)
T PF03825_consen 352 AIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVI 393 (400)
T ss_pred HHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 5666666555 34555667777766666665554
No 225
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.31 E-value=0.0028 Score=68.99 Aligned_cols=141 Identities=9% Similarity=0.095 Sum_probs=92.9
Q ss_pred HHHHHHHhHHHHHHHhcccCCCCCh----HHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHH-------HHHHHHHHHH
Q 009308 48 HKLVDIAVVAVLITYLTDYPRNYNV----VEAARLVNLQEGISASTVIFLTCIPDAFSGRLNV-------IFYSTISCIL 116 (538)
Q Consensus 48 er~~~~g~~~~l~~yl~~~l~g~s~----~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~-------i~~~~~~~~~ 116 (538)
-...|......++.|.++.. +.+. ..++++.+.......+..++.|.+.||. |||+. +.+|.++..+
T Consensus 281 f~~~~~q~~~~l~l~~~~~~-~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl-~~r~~~~~~~~k~~~G~~l~~~ 358 (489)
T PRK10207 281 FYILYAQMPTSLNFFAINNV-HHEILGFSINPVSFQALNPFWVVVASPILAGIYTHL-GSKGKDLSMPMKFTLGMFLCSL 358 (489)
T ss_pred HHHHHHHcccHHHHHHHHhc-cccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHH-hhCCCCCCcHHHHHHHHHHHHH
Confidence 34455555567777777533 2211 1234444444455656777778999995 98873 7778888887
Q ss_pred hHHHHHhhhc--cccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHH
Q 009308 117 GLVLLFITAF--EEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFS 194 (538)
Q Consensus 117 G~~ll~~~~~--~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG 194 (538)
|.+.++.... .......+.+++....++.++|.++..|...+++.+..|+ +..+...+.+++..++|
T Consensus 359 ~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~-----------~~~g~~~g~~~l~~~ig 427 (489)
T PRK10207 359 GFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQ-----------HLMGFILGMWFLTQAAA 427 (489)
T ss_pred HHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChH-----------HHHHHHHHHHHHHHHHH
Confidence 7765432111 0001112456677888899999999999999999998876 23455667778888899
Q ss_pred HHHHHHh
Q 009308 195 VIASVQL 201 (538)
Q Consensus 195 ~~i~~~~ 201 (538)
..+|..+
T Consensus 428 ~~lg~~l 434 (489)
T PRK10207 428 FLLGGYV 434 (489)
T ss_pred HHHHHHH
Confidence 9888765
No 226
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=97.25 E-value=0.011 Score=62.74 Aligned_cols=120 Identities=16% Similarity=0.036 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
+.++......++-...+++....++.|+++.+ |.+..+++.......+...++..+.+.+.++. +++|.+..+..+..
T Consensus 218 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~-g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~-~~~~~~~~~~~~~~ 295 (413)
T PRK15403 218 RLFLTGAATLSLSYIPMMSWVAVSPVILIDAG-GMTTSQFAWTQVPVFGAVIVANAIVARFVKDP-TEPRFIWRAVPIQL 295 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhChHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CchhHHHHHHHHHH
Confidence 45555555566666677777777888999889 99999999987767666777666666655443 45555555555555
Q ss_pred HhHHHHHhhhc-cccccchhHHHHHHHHHHHHHhchhhcccchhhhh
Q 009308 116 LGLVLLFITAF-EEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLA 161 (538)
Q Consensus 116 ~G~~ll~~~~~-~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~a 161 (538)
+|.+++.+... .+ ..+...+++.++.++|.+...|+..+..-
T Consensus 296 ig~~l~~~~~~~~~----~~~~~~~~~~~l~~~G~~~~~p~~~~~al 338 (413)
T PRK15403 296 VGLALLIVGNLLWP----HVWLWSVLGTSLYAFGIGLIFPTLFRFTL 338 (413)
T ss_pred HHHHHHHHHHHHcc----ccHHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 66555543321 01 12334577888899999999999886443
No 227
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=97.24 E-value=0.00013 Score=76.43 Aligned_cols=112 Identities=15% Similarity=0.094 Sum_probs=86.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCccchhhHhH-HHHHHHHHHHHHHhhhhHHHHHhhCCcchh
Q 009308 368 VRIWAGMVLSTICCAVAWRVEVHRLIIINNKGLLGNTDEVIPMSIFWLA-PQFCLLGLMKGLARDGINKFLADQFPEPMH 446 (538)
Q Consensus 368 ~ri~iG~~l~~l~~~~~~~~e~~~~~~~~~~g~~~~~~~~~~~s~~~li-~~~~l~glgE~l~~p~~~~~~~~~aP~~~r 446 (538)
.-|++|.++-+++.+..++. +-+||+ ..=.+.|+||...+|...+++.+..|+..|
T Consensus 99 ~v~~vG~~iW~~Av~~~~fs-----------------------~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~R 155 (493)
T KOG1330|consen 99 RVIAVGIFIWTLAVFASGFS-----------------------NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKR 155 (493)
T ss_pred eEEeeHHHHHHHHHHHHHHH-----------------------HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhh
Confidence 35678888888877765553 344544 445789999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhh-ccc---ccccccCCCcchhHHHHHHHHHHHHHHHHHHhhhcccccC
Q 009308 447 DCVSAITELVTGFASFVNIVSVY-FNK---SLFADTLNSSRLDEYYKMLTIVSFINICYFWWISTFYTRG 512 (538)
Q Consensus 447 g~~~gl~~l~~~iG~~l~~~l~~-~~~---~~~~~~~n~~~l~~~f~~la~l~~v~~~~~~~~~~~~~~~ 512 (538)
|+++++++++.-+|+.+|.+.++ +.. .|. +=|++.++++++.+++..++.+--+++
T Consensus 156 s~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr----------~af~~~avl~vi~~~L~~~f~~eP~rg 215 (493)
T KOG1330|consen 156 SRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWR----------WAFRGSAVLGVIVGLLVFLFVREPERG 215 (493)
T ss_pred hHHHHHhhhhcccccceeEEeeeeeccCccceE----------EEEEeehHHHHHHHHHHHhhccCcccc
Confidence 99999999999999999988877 655 232 225677888888887777765544443
No 228
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.24 E-value=0.0061 Score=66.62 Aligned_cols=115 Identities=10% Similarity=0.020 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHHHHHHh----hhhhhccCCchHHHHHHHHHHHHhHHHHHhhhcccc-ccchhHHHHHHHHHHHHHhc
Q 009308 75 AARLVNLQEGISASTVIFL----TCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEA-ASPLLKRLILIGVVLLAVGK 149 (538)
Q Consensus 75 a~~i~~~~~~~~~~~~l~g----G~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~-~~~~~~~~~~~~l~l~g~g~ 149 (538)
.+++.+.-.....+..++. +++.|| .+..+.+.+|.++..+|.+.+........ ....+.+++....++.++|.
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r-~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge 396 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDR-LPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGE 396 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcC-CCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHH
Confidence 4445555554555555555 566666 37778899999999999888776643211 11124557888999999999
Q ss_pred hhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh
Q 009308 150 AGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL 201 (538)
Q Consensus 150 g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~ 201 (538)
++..|...+++.+..|+ +.+++..+.++++..+|..++..+
T Consensus 397 ~~~~p~g~s~~~~~aP~-----------~~rg~~~g~~~l~~a~g~~~~g~~ 437 (500)
T PRK09584 397 LMISGLGLAMVAQLVPQ-----------RLMGFIMGSWFLTTAGAALIAGYV 437 (500)
T ss_pred HHHhHHHHHHHHHhCcH-----------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999876 255677778887777888777554
No 229
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.10 E-value=0.0027 Score=68.86 Aligned_cols=166 Identities=14% Similarity=0.069 Sum_probs=106.2
Q ss_pred Ccccccchh-hHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhcc---C
Q 009308 26 SWISYNICF-CKAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAF---S 101 (538)
Q Consensus 26 ~~~~~~~~~-~~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~---l 101 (538)
+|.+....+ ....|......+|-...-|+....++.|+++.. |+|..+++.+...+.+...++.+++|+++||. .
T Consensus 262 ~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~-~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~ 340 (495)
T KOG2533|consen 262 KWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNG-GYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIF 340 (495)
T ss_pred CHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCC-CcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhH
Confidence 444443322 245577778889999999999999999999967 89999999999999999999999999999993 2
Q ss_pred CchHHHHHHHHHHHH-hHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccce
Q 009308 102 GRLNVIFYSTISCIL-GLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVS 180 (538)
Q Consensus 102 Gr~~~i~~~~~~~~~-G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~ 180 (538)
.++..+..+..++.+ |.+.+..... ......+.+....+.+...++......+..+++ . ++
T Consensus 341 ~~~~~~~~~~~~~~~~g~~~l~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~--------~--k~ 402 (495)
T KOG2533|consen 341 ARRLLFIVFLCLYAIIGAISLLAAAV--------LPGAYGAFLIGPYGLIATAIIALSWTSANLAGN--------T--KA 402 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcc--------chHHhHHHHhcchhhHHHHHHHHhhccccccch--------H--Hh
Confidence 565555555544443 5555544432 223333333444444444555555555554431 1 22
Q ss_pred eeeehhhHHHHHHHHHHHHHh--------hhhhHHHHH
Q 009308 181 ARKRVWWLIPFFFSVIASVQL--------SSWRVISTF 210 (538)
Q Consensus 181 ~~~f~~~y~~~niG~~i~~~~--------~g~~~~F~i 210 (538)
-...+.+-.+.+.+..+++.+ ++|...|.+
T Consensus 403 ~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~ 440 (495)
T KOG2533|consen 403 LTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYM 440 (495)
T ss_pred HHHHhhhhcchhHHHHhhhhhcccccCcchhhhhHHHH
Confidence 233344445556666665554 677777843
No 230
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.07 E-value=0.0083 Score=67.43 Aligned_cols=236 Identities=10% Similarity=-0.075 Sum_probs=153.2
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhc
Q 009308 70 YNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGK 149 (538)
Q Consensus 70 ~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~ 149 (538)
......+...+++...++++++.+...+|-..|+...+..-++.++++.+.+.+.+..+.+...+.....++.+.++++.
T Consensus 17 ~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia 96 (654)
T TIGR00926 17 FLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIA 96 (654)
T ss_pred HcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHH
Confidence 33445677889999999999999999999999999999999999999998888877533222222344566888899999
Q ss_pred hhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHhhhhhHHHH---------------HHHHH
Q 009308 150 AGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQLSSWRVIST---------------FTVSA 214 (538)
Q Consensus 150 g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~~g~~~~F~---------------i~~~~ 214 (538)
++.+++.+++.+++.+. -+.+++++.+++|+|..+.+.+.+.+. ..-..+. ..++.
T Consensus 97 ~G~GgiKp~vsaf~gdq--------f~~~~~~~~~s~F~~fY~~iNiGSlis-~~i~~~l~~~~~~fg~~~~~~~aF~i~ 167 (654)
T TIGR00926 97 LGTGGIKPCVSAFGGDQ--------FEERQLSLRSRFFSFFYFAINAGSLIS-TIITPILRGDVGCFGCQDCYPLAFGVP 167 (654)
T ss_pred hhccccccCchhhhHhh--------cCccchhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhcccccCcchHHHHHHH
Confidence 99999999999999643 554455679999999999888775533 2222211 23334
Q ss_pred HHHHHHHHHhcccceeeccCCCCCCCCchHHHHHHHHHHHhhccCCCCCCCccccccccCcccccCCccccchhhhcccc
Q 009308 215 TGITLFIFRLGIRFFHSTEITGPAAGSSLAVVFRVVKAALSKRHLNNPYSSNQLYRNDQNQVHLFPQVKFFRWLDKAAII 294 (538)
Q Consensus 215 ~~l~~~~~~~~~~~~~~~~p~~~~~~~~l~~~~~v~~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~a~~~ 294 (538)
+++.++.++.....++..++ .+.+-..+.+++.......+ .+....
T Consensus 168 ~i~m~ia~lvf~~g~k~y~~----~~p~gs~l~~v~~vi~~a~~------------------------------~~~~~~ 213 (654)
T TIGR00926 168 AILMILALIVFMAGSKMYKK----KPPKGNIVSKVIKCIVTALR------------------------------KRFSTR 213 (654)
T ss_pred HHHHHHHHHHHHHhccccCC----CCCCccHHHHHHHHHHHHHH------------------------------HhhccC
Confidence 44444455555554444444 43332333333322222110 000000
Q ss_pred cCCCCCCCccccccccccc--ccchhhHHHHHHhHHHHHhhhhhhHHhhccccchhhhhcccCC
Q 009308 295 EPSTTLISPEEQEKAGRLC--TVAQVRDTKLMLKMVPIWTTFVVFGLIVSTGQTFFPEQGNQLN 356 (538)
Q Consensus 295 ~~~~~~~~~~g~~~~~~~~--~~~~ved~k~~l~~l~l~~~~~~f~~~~~Q~~s~~~~q~~~~~ 356 (538)
.. .....|..+ ....+++++...++++++...+.+++.+.|.....+.+..+++
T Consensus 214 --~~------~~~~~~ld~a~~~~~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~~qa~ 269 (654)
T TIGR00926 214 --SE------HWPLHWLDYAKDKHDIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQAT 269 (654)
T ss_pred --Cc------ccchhHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHH
Confidence 00 000112122 2334567899999999999999999999997777777766664
No 231
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.01 E-value=0.00014 Score=79.93 Aligned_cols=165 Identities=11% Similarity=0.049 Sum_probs=2.9
Q ss_pred HHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhh
Q 009308 45 IFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFIT 124 (538)
Q Consensus 45 ~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~ 124 (538)
.+.+ ....|.......-+++.+ +++.+++|++.+.+-.+..+..++-.+.++|. .|=|-+-+|.++.++|.+++++.
T Consensus 12 ~~~q-~~~~g~~~~~lttiErRF-~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l~~lP 88 (539)
T PF03137_consen 12 GLFQ-MMVSGYVNSSLTTIERRF-GLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLLFALP 88 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHH-HHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHHHhcc
Confidence 3344 566666677777788889 99999999999999999999999999999994 77799999999999999998876
Q ss_pred hcccc------------------------------------------ccchhHHHHHHHHHHHHHhchhhcccchhhhhc
Q 009308 125 AFEEA------------------------------------------ASPLLKRLILIGVVLLAVGKAGMQHFLGPFLAD 162 (538)
Q Consensus 125 ~~~~~------------------------------------------~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad 162 (538)
.+... ....-+.+++++.++.|+|.....+.-.+|+=|
T Consensus 89 hf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDD 168 (539)
T PF03137_consen 89 HFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDD 168 (539)
T ss_dssp ---------------------------------------------------------------SSS--------------
T ss_pred HhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecc
Confidence 54211 001124678889999999999999999999888
Q ss_pred cccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-----------------------------hhhhHHHHHHHH
Q 009308 163 QLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL-----------------------------SSWRVISTFTVS 213 (538)
Q Consensus 163 ~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~-----------------------------~g~~~~F~i~~~ 213 (538)
-.++ ++-.-+.+.+|....+|..+|..+ ..|+++|.+.++
T Consensus 169 nv~~-----------~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~ 237 (539)
T PF03137_consen 169 NVSK-----------KNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGI 237 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccc-----------ccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHH
Confidence 7654 122345577777777777777554 249999998777
Q ss_pred HHHHHHHHHH
Q 009308 214 ATGITLFIFR 223 (538)
Q Consensus 214 ~~~l~~~~~~ 223 (538)
..++..+.++
T Consensus 238 ~~~l~aipl~ 247 (539)
T PF03137_consen 238 LLFLSAIPLF 247 (539)
T ss_dssp ----------
T ss_pred HHHHHHHHHH
Confidence 7665554433
No 232
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=96.94 E-value=0.042 Score=54.19 Aligned_cols=105 Identities=14% Similarity=0.074 Sum_probs=78.9
Q ss_pred HHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHHH
Q 009308 58 VLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKRL 137 (538)
Q Consensus 58 ~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~ 137 (538)
....-+++.+ |+|++|.+.+...-..+.+++ ++.|.+.|++ |.+.++.+|.+...+|+.++..+-.-.. .+.+.+.
T Consensus 23 ~yS~~Lk~~l-~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~-gp~~~l~iG~~~~~~GY~~~~l~~~~~i-~~~~~~~ 98 (250)
T PF06813_consen 23 AYSPQLKSRL-GYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRF-GPWVVLLIGAVLGFVGYGLLWLAVSGRI-PSLPVWL 98 (250)
T ss_pred hhhHHHHHHh-CCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHhCcc-CccchHH
Confidence 4456677889 999999999999988888875 8899999995 9999999999999999998876532111 1124556
Q ss_pred HHHHHHHHHHhchhhcccchhhhhccccc
Q 009308 138 ILIGVVLLAVGKAGMQHFLGPFLADQLRA 166 (538)
Q Consensus 138 ~~~~l~l~g~g~g~~~~~~~~~~ad~~~~ 166 (538)
+.+..++.+.|.+.+.+....--.+.||+
T Consensus 99 ~~~~~~l~~~s~~~~~ta~lvt~~~NFP~ 127 (250)
T PF06813_consen 99 MCLFLFLGGNSSCWFNTASLVTCVRNFPR 127 (250)
T ss_pred HHHHHHHHcccHHHhhhHHHHHHHHhCcc
Confidence 66666677777776655555555577765
No 233
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=96.65 E-value=0.0047 Score=69.43 Aligned_cols=58 Identities=10% Similarity=-0.077 Sum_probs=53.2
Q ss_pred hhHhHHHHHHHHHHHHHHhhhhHHHHHhhCCcchhhHHHHHHHHHHHHHHHHHHHhhh
Q 009308 412 IFWLAPQFCLLGLMKGLARDGINKFLADQFPEPMHDCVSAITELVTGFASFVNIVSVY 469 (538)
Q Consensus 412 ~~~li~~~~l~glgE~l~~p~~~~~~~~~aP~~~rg~~~gl~~l~~~iG~~l~~~l~~ 469 (538)
+..++..-+++|+|+....+.+..++.+..|++.|+.++|++.....+|..+|+++++
T Consensus 172 ~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg 229 (633)
T TIGR00805 172 WLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGS 229 (633)
T ss_pred ehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHH
Confidence 4445566689999999999999999999999999999999999999999999999988
No 234
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.52 E-value=0.017 Score=61.97 Aligned_cols=93 Identities=13% Similarity=0.223 Sum_probs=68.1
Q ss_pred hhhHhHHHHHHHHHHHHHHhhhhHHHHHhhCCcchhhHHHHHHHHHH-HHHHHHHHHhhh-cccccccccCCCcchhHHH
Q 009308 411 SIFWLAPQFCLLGLMKGLARDGINKFLADQFPEPMHDCVSAITELVT-GFASFVNIVSVY-FNKSLFADTLNSSRLDEYY 488 (538)
Q Consensus 411 s~~~li~~~~l~glgE~l~~p~~~~~~~~~aP~~~rg~~~gl~~l~~-~iG~~l~~~l~~-~~~~~~~~~~n~~~l~~~f 488 (538)
++|..+|.-+++|+--.++..+..+++...+|++++..++|+..... ++|..+|+++++ +.. .+ + ....|
T Consensus 458 n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~-~f------g-~~ttf 529 (618)
T KOG3762|consen 458 NPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVE-RF------G-ARTTF 529 (618)
T ss_pred CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhhe-ee------h-hHHHH
Confidence 55666677799999999999999999999999999999999987654 677777777776 322 11 1 12346
Q ss_pred HHHHHHHHHHHHHHHhhhccccc
Q 009308 489 KMLTIVSFINICYFWWISTFYTR 511 (538)
Q Consensus 489 ~~la~l~~v~~~~~~~~~~~~~~ 511 (538)
...++.+++.++++..+.+..++
T Consensus 530 ~~~giAcl~~l~~~~~iq~~l~~ 552 (618)
T KOG3762|consen 530 RIFGIACLVTLALFISIQLLLKR 552 (618)
T ss_pred HHHHHHHHHHHHHHHHhhhhhcc
Confidence 66677777766666666555444
No 235
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=96.51 E-value=0.074 Score=56.25 Aligned_cols=161 Identities=9% Similarity=0.020 Sum_probs=105.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCC--CCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPR--NYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTIS 113 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~--g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~ 113 (538)
|.+|.+......---.|+..-.....|.+..++ +.++...|.+.+.-...=.+.=.+..++-+| +|.|+.++++..+
T Consensus 220 ~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~r-ig~k~~Lllag~i 298 (412)
T PF01306_consen 220 RNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINR-IGAKNLLLLAGVI 298 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHh-cChHhHHHHHHHH
Confidence 566666555555555566665567788876440 2233334445555555556667788999999 5999999999999
Q ss_pred HHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehh-hHHHHH
Q 009308 114 CILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVW-WLIPFF 192 (538)
Q Consensus 114 ~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~-~y~~~n 192 (538)
+.+=.++.++++ +.+.+.+...++++-.+..-....-|+++.+|+ + .....+.. +.++..
T Consensus 299 ~~iRi~~~~~~~--------~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~--------r---lsAt~y~v~~~~~~~ 359 (412)
T PF01306_consen 299 MAIRIIGSGFAT--------NPWVISLIKLLHALEFPLLLVAAFKYITAHFDK--------R---LSATLYLVGFQFAKQ 359 (412)
T ss_dssp HHHHHHHHHT----------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-G--------G---GHHHHHHHHHTTTHH
T ss_pred HHHHHHHHhhhc--------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH--------h---HHHHHHHHHHHHHHH
Confidence 998877777665 467889999999999999999999999999876 1 11222322 224444
Q ss_pred HHHHHHHHh-------hhhhHHHHHHHHHHH
Q 009308 193 FSVIASVQL-------SSWRVISTFTVSATG 216 (538)
Q Consensus 193 iG~~i~~~~-------~g~~~~F~i~~~~~~ 216 (538)
+|..+...+ .|++..|.+-+...+
T Consensus 360 ~~~~i~s~~~G~lyd~~G~~~tylimg~iv~ 390 (412)
T PF01306_consen 360 IGIIILSPLAGYLYDRIGFQHTYLIMGLIVL 390 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhHHhhHhhcCcHHHHHHHHHHHH
Confidence 555544333 688877765444443
No 236
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=96.48 E-value=0.042 Score=58.98 Aligned_cols=58 Identities=9% Similarity=0.087 Sum_probs=54.5
Q ss_pred hhhHhHHHHHHHHHHHHHHhhhhHHHHHhhCCcchhhHHHHHHHHHHHHHHHHHHHhhh
Q 009308 411 SIFWLAPQFCLLGLMKGLARDGINKFLADQFPEPMHDCVSAITELVTGFASFVNIVSVY 469 (538)
Q Consensus 411 s~~~li~~~~l~glgE~l~~p~~~~~~~~~aP~~~rg~~~gl~~l~~~iG~~l~~~l~~ 469 (538)
+.+.+...-++.|++|.... ....++++..|++.|++++|++..+..+|.++++++++
T Consensus 114 Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~q 171 (511)
T TIGR00806 114 SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQ 171 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56667777799999999999 99999999999999999999999999999999999998
No 237
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=96.22 E-value=0.17 Score=54.90 Aligned_cols=182 Identities=10% Similarity=-0.058 Sum_probs=118.3
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhccc-CCCCCh------HHH---H-HHHHHHHHHHHHHHHHhhhhhhc
Q 009308 31 NICFCKAALILLGLIFSHKLVDIAVVAVLITYLTDY-PRNYNV------VEA---A-RLVNLQEGISASTVIFLTCIPDA 99 (538)
Q Consensus 31 ~~~~~~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~-l~g~s~------~~a---~-~i~~~~~~~~~~~~l~gG~laD~ 99 (538)
...+|+.++.+..++++.-++++.+.-..+.|+.++ + +-++ .++ | +....++..+.+..++--.+.++
T Consensus 253 ~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~-~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~ 331 (477)
T TIGR01301 253 FKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVY-GGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRG 331 (477)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHc-CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 468899999999999998888886666666666542 3 2211 122 2 22344455555667777888888
Q ss_pred cCCc-hHHHHHHHHHHHHhHHHHHhhhcccc------------ccchh-HHHHHHHHHHHHHhchhhcccchhhhhcccc
Q 009308 100 FSGR-LNVIFYSTISCILGLVLLFITAFEEA------------ASPLL-KRLILIGVVLLAVGKAGMQHFLGPFLADQLR 165 (538)
Q Consensus 100 ~lGr-~~~i~~~~~~~~~G~~ll~~~~~~~~------------~~~~~-~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~ 165 (538)
+ |+ |++-.++.++.++|.+...+-+..++ ..+.. ....++...+.|+..+.+...-.+++++..+
T Consensus 332 ~-g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~ 410 (477)
T TIGR01301 332 W-GAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSS 410 (477)
T ss_pred h-ccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHcc
Confidence 4 85 66668888888888777664332110 00011 3556677778999999999999999999876
Q ss_pred ccCccccCcccccceeeeehhhHHHHHHHHHHHHHhh---------hhhHHHHHHHHHHHHHHHHHH
Q 009308 166 AHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQLS---------SWRVISTFTVSATGITLFIFR 223 (538)
Q Consensus 166 ~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~~---------g~~~~F~i~~~~~~l~~~~~~ 223 (538)
+ +.++.+...+.+..++.+..++..+.. +-...+.++++.++++.+.-+
T Consensus 411 ~---------~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~ 468 (477)
T TIGR01301 411 N---------LGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLAL 468 (477)
T ss_pred c---------cCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHH
Confidence 4 112345556777777887777766542 233456677777776666544
No 238
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=96.06 E-value=0.02 Score=62.05 Aligned_cols=125 Identities=10% Similarity=-0.183 Sum_probs=92.8
Q ss_pred cccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhh-hccccccc-hhHHHHHHH
Q 009308 64 TDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFIT-AFEEAASP-LLKRLILIG 141 (538)
Q Consensus 64 ~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~-~~~~~~~~-~~~~~~~~~ 141 (538)
++.+ |+++.+.|.+......+..++..+.+.+.+| ++.|+++.++.++.+++.+...+. ..+..... .....+...
T Consensus 280 ~~~l-G~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~-~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~ 357 (468)
T TIGR00788 280 TQCL-PGGPSFSGMSKVVGNLGSLCGVGGYDRFLKT-FPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGD 357 (468)
T ss_pred cccC-CCCcchhhhHHHHHHHHHHHHHHHHHHHHhh-CCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeeh
Confidence 3568 9999999999999999999999999999988 599999999999999877553211 11100000 012234455
Q ss_pred HHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh
Q 009308 142 VVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL 201 (538)
Q Consensus 142 l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~ 201 (538)
-++.+++.|........++.+..|+ +.....|+.+....|+|..++..+
T Consensus 358 ~~l~~~~~g~~~~~~~~~~~~~~p~-----------~~egt~~al~~s~~~lg~~v~~~~ 406 (468)
T TIGR00788 358 SIIAEVLAQLKFMPFLVLLARLCPS-----------GCESSVFALLASILHLGSSVSGFL 406 (468)
T ss_pred hHHHHHHHHHHHccHHHHHHHhCCC-----------CceehHHHHHHHHHHHHHHHHHHH
Confidence 6788889999888889999998776 234567777777888888888764
No 239
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=95.90 E-value=2.7 Score=43.84 Aligned_cols=165 Identities=13% Similarity=0.078 Sum_probs=94.5
Q ss_pred ccccccccccccHHHHHhhhcCcCcccccchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHH
Q 009308 3 PITVPYLKLHSSFRAIIRKLRFISWISYNICFCKAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQ 82 (538)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~ 82 (538)
|-+-|+.+.|+.++..+ +.+.++++.-+..-. =+|....++..++ .- |.|-++-+...-
T Consensus 14 ~~~~~~~~~~~~~~~d~----------------~~illLl~LYllQGi-P~GL~~~iP~lL~-ak-~vSyt~~a~fS~-- 72 (510)
T KOG3574|consen 14 PNANWFKKTHQTLKGDR----------------SSILLLLFLYLLQGI-PLGLIGAIPLLLQ-AK-GVSYTSQAIFSF-- 72 (510)
T ss_pred CCCchhhhcchhhhhhh----------------hhHHHHHHHHHHcCC-chhHhhhhHHHhc-CC-Ccchhhhhhhhh--
Confidence 45567777787766531 233333332222222 2356664444444 34 555555554321
Q ss_pred HHHHHHHHHHhhhhhh-----ccCCchHHHHHHHHHHHHhHHHHHhhhcccc-----ccchhHHHHHHHHHHHHHhchhh
Q 009308 83 EGISASTVIFLTCIPD-----AFSGRLNVIFYSTISCILGLVLLFITAFEEA-----ASPLLKRLILIGVVLLAVGKAGM 152 (538)
Q Consensus 83 ~~~~~~~~l~gG~laD-----~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~-----~~~~~~~~~~~~l~l~g~g~g~~ 152 (538)
...=+..-++-+.+.| | +||||+-++= .-+.+|.+++.++-.++. ....+...+-...++.-+..+.-
T Consensus 73 ay~P~sLKllWaPiVDs~y~k~-~GrrksWvvp-~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQ 150 (510)
T KOG3574|consen 73 AYWPFSLKLLWAPIVDSVYSKR-FGRRKSWVVP-CQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQ 150 (510)
T ss_pred hhhHHHHHHHHHhhhHHHHHHh-hccccceeee-hHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhh
Confidence 2222344567777788 8 5999986543 345667777777654443 11122333334456677777777
Q ss_pred cccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh
Q 009308 153 QHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL 201 (538)
Q Consensus 153 ~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~ 201 (538)
..++....-....+ +.++.+-.....+.|.|.++|..+
T Consensus 151 DIAVDgwALtmLs~-----------e~lgyaST~q~Vg~~~GyfL~~~i 188 (510)
T KOG3574|consen 151 DIAVDGWALTMLSR-----------ENLGYASTCQSVGQTAGYFLGNVV 188 (510)
T ss_pred hhhhhHHHHHhcCH-----------hhcCchhHHHHHHHhhhHHhhcce
Confidence 77777777776644 345556677778899999998764
No 240
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=95.71 E-value=0.082 Score=42.89 Aligned_cols=74 Identities=8% Similarity=0.017 Sum_probs=61.6
Q ss_pred HHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhh
Q 009308 46 FSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITA 125 (538)
Q Consensus 46 ~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~ 125 (538)
-+-||+|- ++.+.++++. ++|.++++++.+....+..++.+...++.++. .+++.+..+.+...+.++.+.+..
T Consensus 5 GigRFayT----plLP~M~~~~-~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 5 GIGRFAYT----PLLPLMQADG-GLSLSQAGWLASANYLGYLVGALLASRLPRHS-RPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred hhHHHHHH----hHhHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35688875 5667777888 99999999999998888888999999999984 778888989988888887777664
No 241
>PTZ00207 hypothetical protein; Provisional
Probab=95.71 E-value=0.1 Score=57.91 Aligned_cols=116 Identities=18% Similarity=0.057 Sum_probs=80.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCccchhhHhHHHHHHHHHHHHHHhhhhHHHHHhhCCcchhh
Q 009308 368 VRIWAGMVLSTICCAVAWRVEVHRLIIINNKGLLGNTDEVIPMSIFWLAPQFCLLGLMKGLARDGINKFLADQFPEPMHD 447 (538)
Q Consensus 368 ~ri~iG~~l~~l~~~~~~~~e~~~~~~~~~~g~~~~~~~~~~~s~~~li~~~~l~glgE~l~~p~~~~~~~~~aP~~~rg 447 (538)
+-+.+|.++.+++.++.++... + ....+.+.+....++.|+|+....+.....+.+..| +.||
T Consensus 92 ~vllig~ll~~iG~ll~ala~~---------~-------~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG 154 (591)
T PTZ00207 92 PIFVLSMTVFCLGTLLFALTFQ---------E-------VIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRG 154 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc---------c-------cccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhH
Confidence 3446777777777766655210 0 012356666777889999999999999999988887 6789
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh-cccccccccCCCcchhHHHHHHHHHHHHHHHHHHhhhccc
Q 009308 448 CVSAITELVTGFASFVNIVSVY-FNKSLFADTLNSSRLDEYYKMLTIVSFINICYFWWISTFY 509 (538)
Q Consensus 448 ~~~gl~~l~~~iG~~l~~~l~~-~~~~~~~~~~n~~~l~~~f~~la~l~~v~~~~~~~~~~~~ 509 (538)
+++|++....++|..+.+.+.. +.. + +...++++++++.++..++.+.+.+..
T Consensus 155 ~a~Gi~~~~~gLGsaI~~~l~~~l~~----~-----~~~~~fl~l~vl~~vv~ll~~~~vr~p 208 (591)
T PTZ00207 155 AVVAIMKTFTGLGSAILGSIQLAFFS----D-----NTSAYFFFLMSFALVVGILAIVFMRLP 208 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH----H-----hHHHHHHHHHHHHHHHHHHHHhheeCC
Confidence 9999999999999986555544 322 1 123456677777777666666655443
No 242
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=95.61 E-value=0.11 Score=47.36 Aligned_cols=74 Identities=16% Similarity=0.187 Sum_probs=55.8
Q ss_pred HHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhc
Q 009308 83 EGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLAD 162 (538)
Q Consensus 83 ~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad 162 (538)
-+...+.+++++.+.++ +|.|+++.+|.+.+.+-.+.... | +.+.++.+=.+.|+|.+..-+....++.+
T Consensus 47 Y~~~~~s~l~~P~iv~~-lg~K~sm~lg~~~y~~y~~~~~~----~-----~~~~l~~~s~l~G~~~a~lW~aqg~ylt~ 116 (156)
T PF05978_consen 47 YGSFAISCLFAPSIVNK-LGPKWSMILGSLGYAIYIASFFY----P-----NSYTLYPASALLGFGAALLWTAQGTYLTS 116 (156)
T ss_pred HHHHHHHHHhHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHh----h-----hHHHHHHHHHHHhhhhHHhhHhhhHHHHH
Confidence 33345555667777888 69999999999998864433222 1 46688899999999999999999999988
Q ss_pred cccc
Q 009308 163 QLRA 166 (538)
Q Consensus 163 ~~~~ 166 (538)
..++
T Consensus 117 ~s~~ 120 (156)
T PF05978_consen 117 YSTE 120 (156)
T ss_pred cCCH
Confidence 7543
No 243
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=95.56 E-value=0.55 Score=49.12 Aligned_cols=103 Identities=14% Similarity=0.096 Sum_probs=81.7
Q ss_pred HHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccc
Q 009308 53 IAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASP 132 (538)
Q Consensus 53 ~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~ 132 (538)
-...+.++.|+.+.. |.+..+++..++.+.....++.++|-++-.|+ -..|.+.+.+++..+-++...+.+
T Consensus 253 va~gsfl~~y~~~~~-g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~-~~~k~Laf~a~~~ill~~~~~l~~------- 323 (422)
T COG0738 253 VAIGSFLVSYLEELL-GLNEQQAAYYLSFFWVGFMVGRFIGSALMSRI-KPEKYLAFYALIAILLLLAVALIG------- 323 (422)
T ss_pred HHHHHHHHHHHHhcC-CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHhc-------
Confidence 345567889999888 99999999999999999999999999999984 777777766655554444434433
Q ss_pred hhHHHHHHHHHHHHHhchhhcccchhhhhccccc
Q 009308 133 LLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRA 166 (538)
Q Consensus 133 ~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~ 166 (538)
+ ..-+.++++.|+..+.+.|++.+..-+..++
T Consensus 324 -g-~v~~~~l~~ig~F~simfPTIfslal~~l~~ 355 (422)
T COG0738 324 -G-VVALYALFLIGLFNSIMFPTIFSLALKNLGE 355 (422)
T ss_pred -C-hHHHHHHHHHHHHhHHHHHHHHHHHHhccCc
Confidence 2 2445678889999999999999999999876
No 244
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=95.56 E-value=0.34 Score=47.91 Aligned_cols=98 Identities=17% Similarity=0.217 Sum_probs=70.4
Q ss_pred hHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccchh
Q 009308 55 VVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPLL 134 (538)
Q Consensus 55 ~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~~ 134 (538)
.+.+...|+.+.. ++...+.+.+.-.--+.+.+...+.|-|+|+ .||||.-..-++.|++.+ ++-.-| +
T Consensus 55 LQgPYvYyLYstY-gFgkG~IgqLfiaGfgSsmLFGtivgSLaDk-qGRKracvtycitYiLsC----iTKhSp-----q 123 (454)
T KOG4332|consen 55 LQGPYVYYLYSTY-GFGKGDIGQLFIAGFGSSMLFGTIVGSLADK-QGRKRACVTYCITYILSC----ITKHSP-----Q 123 (454)
T ss_pred hcCceeeeeehhc-CccCCccceeeecccchHHHHHHHHHHHHhh-hccccceeeehHHHHHHH----HhhcCC-----c
Confidence 4556667777778 8888998888666566677778888999999 599998766666655443 333222 5
Q ss_pred HHHHHHHHHHHHHhchhhcccchh-hhhcc
Q 009308 135 KRLILIGVVLLAVGKAGMQHFLGP-FLADQ 163 (538)
Q Consensus 135 ~~~~~~~l~l~g~g~g~~~~~~~~-~~ad~ 163 (538)
+-.+.+||.+-|+.+.......-+ +++|-
T Consensus 124 YkVLmVGR~LGGiaTsLLFSaFEsWliaEH 153 (454)
T KOG4332|consen 124 YKVLMVGRVLGGIATSLLFSAFESWLIAEH 153 (454)
T ss_pred eEEEeehhhhhhHHHHHHHHHHHHHHHHHh
Confidence 678899999999999986555444 44444
No 245
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=95.43 E-value=0.031 Score=60.04 Aligned_cols=158 Identities=11% Similarity=-0.056 Sum_probs=108.0
Q ss_pred HHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhcccc
Q 009308 50 LVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEA 129 (538)
Q Consensus 50 ~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~ 129 (538)
++.--+..+|--++++ + +..+.--|.....--++=++.-++.++|-.+ +|+-+.+.+++..+.+=++.++...
T Consensus 385 ~g~~lv~tFLfWHled-~-~~~~~LfGv~~a~~~~gEI~~~ffs~klI~k-iGHv~v~~lgLa~~~~Rf~~~S~L~---- 457 (618)
T KOG3762|consen 385 AGVGLVFTFLFWHLED-L-GGIKTLFGVVSALCHAGEILFYFFSFKLIEK-IGHVNVMYLGLACNVGRFLYYSYLQ---- 457 (618)
T ss_pred HHHHHHHHHHHHHHhh-c-CCcceeeeehhhhhccchHHHHHHHHHHHHH-hcccceeeehhhHHHHHHHHHHHhc----
Confidence 3443344555555554 4 4333333322222223335556778899999 5999999999999998777766654
Q ss_pred ccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeee--hhhHHHHHHHHHHHHHh---hhh
Q 009308 130 ASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKR--VWWLIPFFFSVIASVQL---SSW 204 (538)
Q Consensus 130 ~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f--~~~y~~~niG~~i~~~~---~g~ 204 (538)
++|+.+..-+++|+..|.+-.++.+|+.+..|+ +-+...+..+ ..+.++-.+|++||..+ +|=
T Consensus 458 ----n~W~vLPieilqgit~aliWaa~~sY~s~vaPp--------~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~ 525 (618)
T KOG3762|consen 458 ----NPWMVLPIEILQGITHALIWAAIISYASHVAPP--------GLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGA 525 (618)
T ss_pred ----CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCC--------cchHHHHHHHHHHhcccCcchhhhhhhhhheeehh
Confidence 577888889999999999999999999999887 2333333333 22346778999999887 666
Q ss_pred hHHHHHHHHHHHHHHHHHHhcc
Q 009308 205 RVISTFTVSATGITLFIFRLGI 226 (538)
Q Consensus 205 ~~~F~i~~~~~~l~~~~~~~~~ 226 (538)
+..|.+..+..++.++.+...+
T Consensus 526 ~ttf~~~giAcl~~l~~~~~iq 547 (618)
T KOG3762|consen 526 RTTFRIFGIACLVTLALFISIQ 547 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 7777777776666666655443
No 246
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.42 E-value=0.26 Score=51.98 Aligned_cols=147 Identities=14% Similarity=0.124 Sum_probs=95.3
Q ss_pred HHHHHHHhccc-CCCCChHHHHHH-HHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccccch
Q 009308 56 VAVLITYLTDY-PRNYNVVEAARL-VNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAASPL 133 (538)
Q Consensus 56 ~~~l~~yl~~~-l~g~s~~~a~~i-~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~~~~ 133 (538)
.+.++.|++++ . |++..|...- .-.+.-.....-++...+.|. +|.|..++++.+..++..+++....
T Consensus 23 EPfl~~yL~~~~k-n~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~-l~Ykpviil~~~~~i~t~~lll~~~-------- 92 (412)
T PF01770_consen 23 EPFLTPYLTGPDK-NFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDY-LRYKPVIILQALSYIITWLLLLFGT-------- 92 (412)
T ss_pred CccchHHHcCCcc-CCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHHHHHHHC--------
Confidence 45688899887 7 9999888744 445555555567788999999 5999999999999898888887765
Q ss_pred hHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeee-hhhHHHHHHHHHHHHHh-----hhhhHH
Q 009308 134 LKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKR-VWWLIPFFFSVIASVQL-----SSWRVI 207 (538)
Q Consensus 134 ~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f-~~~y~~~niG~~i~~~~-----~g~~~~ 207 (538)
+....-+.-++.|++.+. -.++-+-+|.. .|+++-.+..+.. .....+..+|+++|.++ .++...
T Consensus 93 sv~~mq~~q~~yg~~~a~----evay~sYiys~-----v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L 163 (412)
T PF01770_consen 93 SVLAMQLMQFFYGLATAA----EVAYYSYIYSV-----VDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQL 163 (412)
T ss_pred cHHHHHHHHHHHHHHHHH----HHHHHHHheee-----cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH
Confidence 355666666677766654 33444444443 2222211111111 22234555666666655 567777
Q ss_pred HHHHHHHHHHHHHH
Q 009308 208 STFTVSATGITLFI 221 (538)
Q Consensus 208 F~i~~~~~~l~~~~ 221 (538)
+.++.....+++++
T Consensus 164 ~~isl~~~~~a~~~ 177 (412)
T PF01770_consen 164 NYISLASVSLALLI 177 (412)
T ss_pred HHHHHHHHHHHHHH
Confidence 77877777766665
No 247
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=95.41 E-value=0.00033 Score=74.96 Aligned_cols=142 Identities=11% Similarity=-0.010 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHH-
Q 009308 44 LIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLF- 122 (538)
Q Consensus 44 ~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~- 122 (538)
...+..+..+........++.+.. +.+.. -...........++.+++.++.|| +|||+.++.+..+.++..+.+.
T Consensus 260 l~~~~~~~g~~~~~~~~~~i~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~GRr~~~i~~~~~~~~~~~~~~~ 335 (451)
T PF00083_consen 260 LQFFQQFSGINFIFYYSPSIFENA-GISNS--FLATLILGLVNFLGTLLAIFLIDR-FGRRKLLIIGLLLMAICSLILGI 335 (451)
T ss_pred cccccccccccccccccccccccc-ccccc--cccccccccccccccccccccccc-ccccccccccccccccccccccc
Confidence 333333333333333344444445 55555 222233345556677888899999 5999999999998888776664
Q ss_pred hhhcccccc-chhHHHHHHHHHHH-HHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHH
Q 009308 123 ITAFEEAAS-PLLKRLILIGVVLL-AVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQ 200 (538)
Q Consensus 123 ~~~~~~~~~-~~~~~~~~~~l~l~-g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~ 200 (538)
.....+... ..+... .+...+. .....+..+....+.+|.+|. +.|....+..+...++|.++++.
T Consensus 336 ~~~~~~~~~~~~~~~~-i~~~~l~~~~~~~g~~~~~~~~~~ElfPt-----------~~R~~~~~~~~~~~~i~~~i~~~ 403 (451)
T PF00083_consen 336 IFFLGVSSSSWWSILS-IVFLALFFAFFSLGWGPLPWIYTAELFPT-----------KVRSTGIGLSYAVGRIGGFIIPF 403 (451)
T ss_pred cccccccccccccccc-ceeeeeccccccccccccccccccccccc-----------ccccccccccccccccccccccc
Confidence 111111000 001111 1222222 222223456667888999987 13445555555556677776655
Q ss_pred h
Q 009308 201 L 201 (538)
Q Consensus 201 ~ 201 (538)
+
T Consensus 404 ~ 404 (451)
T PF00083_consen 404 L 404 (451)
T ss_pred c
Confidence 4
No 248
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=95.15 E-value=0.43 Score=52.96 Aligned_cols=119 Identities=10% Similarity=-0.017 Sum_probs=77.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCCh---HHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHH-HHH
Q 009308 35 CKAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNV---VEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVI-FYS 110 (538)
Q Consensus 35 ~~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~---~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i-~~~ 110 (538)
+|.+...+...+++-..||++....+....+-+ +-+. .++++....+..+..++.++.|.+.-+ ++|.|-. +++
T Consensus 309 ~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf-~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~-ir~~Kw~li~~ 386 (599)
T PF06609_consen 309 RRGFAALLVISFISGMNFFSVNILWPQQVVNVF-GSDPISITEIGWISSPVGFGSCAGAVILGLLFSK-IRHIKWQLIFG 386 (599)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCCCcccceeehhhhhHHHHHHHHHHHHHHHHHH-ccchhHHHHHH
Confidence 467777777888888888887766665555433 3222 356777777788788888888888877 4775544 577
Q ss_pred HHHHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhh
Q 009308 111 TISCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLA 161 (538)
Q Consensus 111 ~~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~a 161 (538)
++++.++..+++... ++ +....+...++.|+|.|+..........
T Consensus 387 ~~~~ta~~Gama~~~-~~-----n~~~~i~~~~l~g~giG~~~~~~~~~~q 431 (599)
T PF06609_consen 387 SVLMTAFCGAMAAVR-PD-----NKNAAIAFLVLAGFGIGGILVPAIVIAQ 431 (599)
T ss_pred HHHHHHHHHHHHHcc-CC-----CcchHHHHHHHHHHhHHHHHHHHHHeeE
Confidence 777776666555432 11 2223345567788888876655544443
No 249
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=95.12 E-value=0.37 Score=50.05 Aligned_cols=156 Identities=13% Similarity=0.183 Sum_probs=103.5
Q ss_pred ccccccccccc---ccHHHHHhhhcCcCccc----------ccchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cccC
Q 009308 2 IPITVPYLKLH---SSFRAIIRKLRFISWIS----------YNICFCKAALILLGLIFSHKLVDIAVVAVLITYL-TDYP 67 (538)
Q Consensus 2 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~l~~~~~~er~~~~g~~~~l~~yl-~~~l 67 (538)
+|-|.|.-+.| +.++++.+..+...... +-..-+-..+.+++...+--.-.|....+...++ ++.+
T Consensus 213 lpETL~~rk~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rf 292 (451)
T KOG2615|consen 213 LPETLPLRKRNDEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRF 292 (451)
T ss_pred CCccccchhhcccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCcc
Confidence 57788887777 65666554443333321 1111223456666655555555555666666666 4679
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHH-hHHHHHhhhccccccchhHHHHHHHHHHHH
Q 009308 68 RNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCIL-GLVLLFITAFEEAASPLLKRLILIGVVLLA 146 (538)
Q Consensus 68 ~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~-G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g 146 (538)
|+++.|.|-+.+.-.....+..+.-+...|+..|.-+....-..+.++ ..+++.... ....++.+..+-.
T Consensus 293 -g~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~--------~~~~l~~~s~l~s 363 (451)
T KOG2615|consen 293 -GYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLAR--------TPVVLYLGSTLKS 363 (451)
T ss_pred -CCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccc--------cchhhhHHHHHHH
Confidence 999999999988887777777777788888875554444443333333 333444443 2457899999999
Q ss_pred Hhchhhcccchhhhhccccc
Q 009308 147 VGKAGMQHFLGPFLADQLRA 166 (538)
Q Consensus 147 ~g~g~~~~~~~~~~ad~~~~ 166 (538)
+..+...||+..++....|.
T Consensus 364 f~~A~~vt~Lt~Lv~~~~~~ 383 (451)
T KOG2615|consen 364 FSTASVVTCLTSLVHKYGPQ 383 (451)
T ss_pred HHHHHhhHHHHHHHHhcCCc
Confidence 99999999999999998876
No 250
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=95.10 E-value=0.17 Score=55.14 Aligned_cols=84 Identities=7% Similarity=0.115 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHhhhhHHHHHhhCCcc--hhhHHHHHHHHHHHHHHHHHHHhhh-cccccccccCCCcchhHHHHHHHHH
Q 009308 418 QFCLLGLMKGLARDGINKFLADQFPEP--MHDCVSAITELVTGFASFVNIVSVY-FNKSLFADTLNSSRLDEYYKMLTIV 494 (538)
Q Consensus 418 ~~~l~glgE~l~~p~~~~~~~~~aP~~--~rg~~~gl~~l~~~iG~~l~~~l~~-~~~~~~~~~~n~~~l~~~f~~la~l 494 (538)
...+..+|..+..+...+++.+..|++ .|+...++++....+|..++|.+.+ +.+ +.+ ..+-|...++.
T Consensus 106 ~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~-----~~G---w~~~F~iaaig 177 (493)
T PRK15462 106 SLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQE-----EYS---WAMGFGLAAVG 177 (493)
T ss_pred HHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHh-----hhC---hHHHHHHHHHH
Confidence 334566777777888888999999875 7999999999999999999999998 432 111 23345555555
Q ss_pred HHHHHHHHHhhhccc
Q 009308 495 SFINICYFWWISTFY 509 (538)
Q Consensus 495 ~~v~~~~~~~~~~~~ 509 (538)
++++.+.++...|++
T Consensus 178 m~l~li~~~~~~~~l 192 (493)
T PRK15462 178 MIAGLVIFLCGNRHF 192 (493)
T ss_pred HHHHHHHHHHhhhhh
Confidence 666666665544444
No 251
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=94.98 E-value=0.23 Score=51.83 Aligned_cols=123 Identities=13% Similarity=0.058 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCccchhhHhHHHHHHHHHHHHHHhhhhHHHHHhhCCcc---h
Q 009308 369 RIWAGMVLSTICCAVAWRVEVHRLIIINNKGLLGNTDEVIPMSIFWLAPQFCLLGLMKGLARDGINKFLADQFPEP---M 445 (538)
Q Consensus 369 ri~iG~~l~~l~~~~~~~~e~~~~~~~~~~g~~~~~~~~~~~s~~~li~~~~l~glgE~l~~p~~~~~~~~~aP~~---~ 445 (538)
-+.+|.++..+|.+++.+... ... .....+...+.....+.++|.++.-|+...+..+|-+++ .
T Consensus 3 tI~~g~~~~~~G~~ll~l~~~-------~~~------~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~ 69 (372)
T PF00854_consen 3 TILLGSIVYLLGHVLLTLSAI-------PPS------LPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSR 69 (372)
T ss_dssp HHHHHHHHHHHHHHH--HHHT-------SSS------C------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTH
T ss_pred hhhHHHHHHHHHHHHhHHHHh-------cch------hhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhh
Confidence 356788888888777544210 000 012344555667778999999999999999999998877 4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhh-cccccccccCCCcchhHHHHHHHHHHHHHHHHHHhhhcccccC
Q 009308 446 HDCVSAITELVTGFASFVNIVSVY-FNKSLFADTLNSSRLDEYYKMLTIVSFINICYFWWISTFYTRG 512 (538)
Q Consensus 446 rg~~~gl~~l~~~iG~~l~~~l~~-~~~~~~~~~~n~~~l~~~f~~la~l~~v~~~~~~~~~~~~~~~ 512 (538)
|...-..++....+|..++..+.+ +.+ + -.....|++.++.++++.+.|+.-.++|+.+
T Consensus 70 ~~~~F~~fY~~in~G~~~~~~~~~~i~~-----~---~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~ 129 (372)
T PF00854_consen 70 RDSFFNWFYWGINIGSLFSPTLVPYIQQ-----N---YGWFLGFGIPAIGMLLALIVFLSGRKRYRKV 129 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCHHHH-----C---S-HHHHHHHHHHHHHHHHHHHHCCCCTT--S
T ss_pred hhhhHHHHHHHHhhhhHhhcccchhhcc-----c---cchhhhhhHHHHHHHHHHHHHHhCCcCCcCc
Confidence 555666778899999999988877 443 1 1234567778888888888888877777554
No 252
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=94.79 E-value=6.5 Score=41.56 Aligned_cols=59 Identities=10% Similarity=0.090 Sum_probs=51.7
Q ss_pred hhhHhHHHHHHHHHHHHHHhhhhHHHHHhhCCcchhhHHHHHHHHHHHHHHHHHHHhhh
Q 009308 411 SIFWLAPQFCLLGLMKGLARDGINKFLADQFPEPMHDCVSAITELVTGFASFVNIVSVY 469 (538)
Q Consensus 411 s~~~li~~~~l~glgE~l~~p~~~~~~~~~aP~~~rg~~~gl~~l~~~iG~~l~~~l~~ 469 (538)
++|.+....+.-|+-.+...++....+.++.|++.|-++||....+-++|..++++++-
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l 392 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGL 392 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 44544455567899999999999999999999999999999999999999999998876
No 253
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=94.79 E-value=0.64 Score=50.90 Aligned_cols=90 Identities=11% Similarity=0.061 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccc-----cchhHHHHHHHHHHHHHhch
Q 009308 76 ARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAA-----SPLLKRLILIGVVLLAVGKA 150 (538)
Q Consensus 76 ~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~-----~~~~~~~~~~~l~l~g~g~g 150 (538)
............++.+++.++.||+ |||+.++.|...+.++.+++......... ....+..+....+.+..-..
T Consensus 332 ~~~~~~~~~v~~~~t~~~~~lvd~~-gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~ 410 (513)
T KOG0254|consen 332 FLASIILGVVNFLGTLVATYLVDRF-GRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAI 410 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhc
Confidence 3334444555666677779999995 99999999999999998887765322110 01111122222222333333
Q ss_pred hhcccchhhhhccccc
Q 009308 151 GMQHFLGPFLADQLRA 166 (538)
Q Consensus 151 ~~~~~~~~~~ad~~~~ 166 (538)
+..|....+.+|.+|.
T Consensus 411 g~g~v~w~~~sEifp~ 426 (513)
T KOG0254|consen 411 GWGPVPWVIVSEIFPL 426 (513)
T ss_pred ccccchhhhhhccCcH
Confidence 3445555677899886
No 254
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=93.75 E-value=0.011 Score=65.00 Aligned_cols=102 Identities=8% Similarity=-0.033 Sum_probs=3.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH----HHHhhhh--------ccCCC--------C----C----CCCCccchhhHhHHHH
Q 009308 368 VRIWAGMVLSTICCAVAWRVEV----HRLIIIN--------NKGLL--------G----N----TDEVIPMSIFWLAPQF 419 (538)
Q Consensus 368 ~ri~iG~~l~~l~~~~~~~~e~----~~~~~~~--------~~g~~--------~----~----~~~~~~~s~~~li~~~ 419 (538)
+.+++|.++++++.++.++-+. +++.... +..++ . . .......-.++++..-
T Consensus 69 rwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq 148 (539)
T PF03137_consen 69 RWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQ 148 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceeeecHHHHHHHHHHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHH
Confidence 6889999999999887654322 1111100 01122 0 0 0112223356677788
Q ss_pred HHHHHHHHHHhhhhHHHHHhhCCcchhhHHHHHHHHHHHHHHHHHHHhhh
Q 009308 420 CLLGLMKGLARDGINKFLADQFPEPMHDCVSAITELVTGFASFVNIVSVY 469 (538)
Q Consensus 420 ~l~glgE~l~~p~~~~~~~~~aP~~~rg~~~gl~~l~~~iG~~l~~~l~~ 469 (538)
++.|+|..-..+-+.+++-+.++++..+.+.|+.+.+..+|-.+|-++++
T Consensus 149 ~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~ 198 (539)
T PF03137_consen 149 LLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGS 198 (539)
T ss_dssp ---SSS--------------------------------------------
T ss_pred HHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999888877
No 255
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=93.45 E-value=0.22 Score=52.89 Aligned_cols=165 Identities=10% Similarity=-0.089 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHH--------HHHHHHHHHHHHHH-HHHHhhhhhhccCCchHHHHHHH
Q 009308 41 LLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVE--------AARLVNLQEGISAS-TVIFLTCIPDAFSGRLNVIFYST 111 (538)
Q Consensus 41 l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~--------a~~i~~~~~~~~~~-~~l~gG~laD~~lGr~~~i~~~~ 111 (538)
..+..+.-..++|+..-+...-+++ + +..+.+ .+....+....+++ +..++.++.|+ +|||+..+.|.
T Consensus 309 t~~~WFllDiafy~~nL~~s~I~~~-i-g~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~-iGRk~iq~~GF 385 (538)
T KOG0252|consen 309 TAGTWFLLDIAFYGQNLFQSVIFSA-I-GVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDI-IGRKYIQLMGF 385 (538)
T ss_pred HHHHHHhhhhhhhccccHHHHHHHh-h-ccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeeh-hhhHHHHHhhH
Confidence 3456667778899888777766653 3 222222 22223344444444 67788899999 59999999999
Q ss_pred HHHHHhHHHHHhhhccccccchh-HHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHH
Q 009308 112 ISCILGLVLLFITAFEEAASPLL-KRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIP 190 (538)
Q Consensus 112 ~~~~~G~~ll~~~~~~~~~~~~~-~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~ 190 (538)
+++.+-.+.+...-... ..... ...+.+..++..+|=+ .+....-+|.+|. +-|+....+.-.+
T Consensus 386 ~~~~i~~~~~~~~y~~~-~~~~Gf~v~y~l~~ff~NFGPn---~ttfivpaE~FPa-----------rvR~t~hGIsAA~ 450 (538)
T KOG0252|consen 386 FIMTIFFFVIAGPYNQL-ENTIGFVVLYSLTFFFGNFGPN---ATTFIVPAEIFPA-----------RVRSTCHGISAAS 450 (538)
T ss_pred HHHHHHHHHHcCCcccc-cccCceeehHHHHHHHHhcCCC---ceeEEeehhhchH-----------HHhhhhhhHHHHh
Confidence 99987665555432100 01111 1233333444444433 3333444688875 2344455565566
Q ss_pred HHHHHHHHHHh------------hhhhHHHHHHHHHHHHHHHHHH
Q 009308 191 FFFSVIASVQL------------SSWRVISTFTVSATGITLFIFR 223 (538)
Q Consensus 191 ~niG~~i~~~~------------~g~~~~F~i~~~~~~l~~~~~~ 223 (538)
.-+|+.++... .|.+..|++.+.+++++.++.+
T Consensus 451 GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~ 495 (538)
T KOG0252|consen 451 GKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTL 495 (538)
T ss_pred ccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeE
Confidence 66888888664 4778889888888887777544
No 256
>PRK03612 spermidine synthase; Provisional
Probab=92.58 E-value=4.1 Score=44.79 Aligned_cols=43 Identities=9% Similarity=-0.021 Sum_probs=32.8
Q ss_pred HHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhc
Q 009308 56 VAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDA 99 (538)
Q Consensus 56 ~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~ 99 (538)
.-...-.+..-+ |-+....+.++++|.++..++..++|+++++
T Consensus 34 Ev~~~r~l~~~~-G~s~~~~~~ii~~fl~glalGs~l~~~~~~~ 76 (521)
T PRK03612 34 ELLLGTLASYLL-GDSVTQFSTVIGLMLFAMGVGALLSKYLLRD 76 (521)
T ss_pred HHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 333344444446 7788888999999999999999999988755
No 257
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=92.58 E-value=0.68 Score=49.99 Aligned_cols=140 Identities=18% Similarity=0.099 Sum_probs=104.1
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHH
Q 009308 41 LLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVL 120 (538)
Q Consensus 41 l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~l 120 (538)
++...+++-.-.-+-...+..|+..++ +++..+.+...+..+...+++.++...+--+.+|-++++..|+....++...
T Consensus 246 ~l~~~~~~~~~~~~~~~~~~~yl~~~f-~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~ 324 (463)
T KOG2816|consen 246 LLVAFLSSLPEAGGASDVLLLYLKAKF-GWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLL 324 (463)
T ss_pred HHHHHHHHHHHhcCceeEEEEEEeeec-CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHH
Confidence 334444444444334435567888889 9999999999999999999999988844444479999999999999999999
Q ss_pred HHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHH
Q 009308 121 LFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQ 200 (538)
Q Consensus 121 l~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~ 200 (538)
..++. +.++.+.+..+.+ ..+...|...++.+.+.++ +| ....+.+......+...+++.
T Consensus 325 ~af~~--------~~w~~~~~~v~~~-~~~~~~pa~~s~~s~~v~~--------~e---~g~v~~~is~i~~l~~~~~~~ 384 (463)
T KOG2816|consen 325 FAFAT--------ETWMMFAAGVVVA-LAGIVFPAIRAFASILVSP--------EE---QGKVFGIISGIEGLSGVVSPA 384 (463)
T ss_pred HHHhc--------cchhhhHHHHHHH-hhcchhHHHHhHHHhhccc--------cc---ccchhhHHHHHHHHhhhhhHH
Confidence 98886 3556666655544 4556778889999988755 33 346677878788888888877
Q ss_pred h
Q 009308 201 L 201 (538)
Q Consensus 201 ~ 201 (538)
+
T Consensus 385 ~ 385 (463)
T KOG2816|consen 385 L 385 (463)
T ss_pred H
Confidence 6
No 258
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=91.35 E-value=2.3 Score=41.95 Aligned_cols=117 Identities=13% Similarity=0.141 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCccchhhHhHHHHHHHHHHHHHHhhhhHHHHHhhCCcchhhH
Q 009308 369 RIWAGMVLSTICCAVAWRVEVHRLIIINNKGLLGNTDEVIPMSIFWLAPQFCLLGLMKGLARDGINKFLADQFPEPMHDC 448 (538)
Q Consensus 369 ri~iG~~l~~l~~~~~~~~e~~~~~~~~~~g~~~~~~~~~~~s~~~li~~~~l~glgE~l~~p~~~~~~~~~aP~~~rg~ 448 (538)
-..+|.++..+++......-..+ ..+.+.|.+.....+.+.|........+.-..+.-|+ .||.
T Consensus 68 ~l~iG~~~~~~GY~~~~l~~~~~---------------i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~ 131 (250)
T PF06813_consen 68 VLLIGAVLGFVGYGLLWLAVSGR---------------IPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGT 131 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCc---------------cCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCc
Confidence 34577777777776554431111 0123444444445667788888888888888889986 6999
Q ss_pred HHHHHHHHHHHHHHHHHHhhh-cccccccccCCCcchhHHHHHHHHHHHHHHHHHHhhhcccc
Q 009308 449 VSAITELVTGFASFVNIVSVY-FNKSLFADTLNSSRLDEYYKMLTIVSFINICYFWWISTFYT 510 (538)
Q Consensus 449 ~~gl~~l~~~iG~~l~~~l~~-~~~~~~~~~~n~~~l~~~f~~la~l~~v~~~~~~~~~~~~~ 510 (538)
+.|+--...+++..+=..+.. +.+ + +.+.|..+++....+..++.....|...
T Consensus 132 vvgilk~~~GLSaai~t~i~~~~f~----~-----~~~~fll~la~~~~~v~l~~~~~vr~~~ 185 (250)
T PF06813_consen 132 VVGILKGFFGLSAAIFTQIYSAFFG----D-----DPSSFLLFLAVLPAVVCLVAMFFVRPVP 185 (250)
T ss_pred eehhhhHHHHhHHHHHHHHHHHHcC----C-----ChHHHHHHHHHHHHHHHHHHhhheeccC
Confidence 999999999999887666655 332 2 2344666777766666555555555543
No 259
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=90.76 E-value=0.7 Score=49.07 Aligned_cols=154 Identities=14% Similarity=0.063 Sum_probs=108.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhcc---CCchHHHH-HHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAF---SGRLNVIF-YST 111 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~---lGr~~~i~-~~~ 111 (538)
+.+..+....+.-.|++-.=.+.+++|+++ + |.+....+.+-..--....+..++-|..+||. +||||-.+ .+.
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~-l-Gvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s 109 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQS-L-GVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGS 109 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHH-c-CCCcccccccccccccccceecccccccccccccccccccchHHHhh
Confidence 344444455555556666556677889986 8 88888888888887888889999999999973 58876654 455
Q ss_pred HHHHHhHHHHHhhhcccc---------ccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceee
Q 009308 112 ISCILGLVLLFITAFEEA---------ASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSAR 182 (538)
Q Consensus 112 ~~~~~G~~ll~~~~~~~~---------~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~ 182 (538)
....++..++..++..-. ........+.++..+.=+.+-..+..+=++.+|...+ + ++.++
T Consensus 110 ~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~-----d---~~~~~-- 179 (498)
T KOG0637|consen 110 LLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARG-----D---AKKTR-- 179 (498)
T ss_pred HHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccC-----h---hhhhc--
Confidence 555666666555432111 1123456777888888888888888899999999765 2 22222
Q ss_pred eehhhHHHHHHHHHHHHHh
Q 009308 183 KRVWWLIPFFFSVIASVQL 201 (538)
Q Consensus 183 ~f~~~y~~~niG~~i~~~~ 201 (538)
+.++|-+.+.+|..+|+.+
T Consensus 180 Ans~f~~f~avGnvLGY~~ 198 (498)
T KOG0637|consen 180 ANSVFSFFMAVGNVLGYAL 198 (498)
T ss_pred cchhHHHHHHhcceeeeec
Confidence 6788888999999999877
No 260
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=89.91 E-value=2.4 Score=45.84 Aligned_cols=81 Identities=11% Similarity=0.016 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCccc-hhhHhHHHHHHHHHHHHHHhhhhHHHHHhhCCcchhhH
Q 009308 370 IWAGMVLSTICCAVAWRVEVHRLIIINNKGLLGNTDEVIPM-SIFWLAPQFCLLGLMKGLARDGINKFLADQFPEPMHDC 448 (538)
Q Consensus 370 i~iG~~l~~l~~~~~~~~e~~~~~~~~~~g~~~~~~~~~~~-s~~~li~~~~l~glgE~l~~p~~~~~~~~~aP~~~rg~ 448 (538)
+..|.+++++|-++...++.. +- +.+++...+++.|+|-.-... .=.++++.+-.+.|.+
T Consensus 105 li~s~ii~~~g~llY~~l~~~------------------~~~~~y~mL~~R~l~Gvg~~n~a~-lR~Y~a~~s~~~dR~r 165 (488)
T KOG2325|consen 105 LIVSFLIAIIGNLLYLALAYV------------------PNGVKYLMLVARILTGVGVGNFAV-LRAYIADASTVEDRPR 165 (488)
T ss_pred HHHHHHHHHHHHHHHHHHHhc------------------ccchHHHHHHHHHHcCcCcccHHH-HHHHHHhccCccchHH
Confidence 347888888887776555432 22 778899999999998443332 3345555555555666
Q ss_pred HHHHHHHHHHHHHHHHHHhhh
Q 009308 449 VSAITELVTGFASFVNIVSVY 469 (538)
Q Consensus 449 ~~gl~~l~~~iG~~l~~~l~~ 469 (538)
+++.......+|..+||.+..
T Consensus 166 A~a~~~~~~vlg~ilGp~~q~ 186 (488)
T KOG2325|consen 166 AFAATSGGFVLGIILGPTIQL 186 (488)
T ss_pred HHHHhhhHHHHHHHHhHHHHH
Confidence 666666666777777766655
No 261
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=88.56 E-value=2.3 Score=46.51 Aligned_cols=85 Identities=6% Similarity=-0.056 Sum_probs=64.2
Q ss_pred chhhHhHHHHHHHHHHHHHHhhhhHHHHHhhCCcchhhHHHHHHHHHHHHHHHHHHHhhh-cccccccccCCCcchhHHH
Q 009308 410 MSIFWLAPQFCLLGLMKGLARDGINKFLADQFPEPMHDCVSAITELVTGFASFVNIVSVY-FNKSLFADTLNSSRLDEYY 488 (538)
Q Consensus 410 ~s~~~li~~~~l~glgE~l~~p~~~~~~~~~aP~~~rg~~~gl~~l~~~iG~~l~~~l~~-~~~~~~~~~~n~~~l~~~f 488 (538)
-++++++..=++.|++.......+...+.+..+++.|+.++.+ ......+..+++.+.+ +.++|. +.+
T Consensus 169 ~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~Wr----------~~~ 237 (521)
T KOG0255|consen 169 PNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRDWR----------WLF 237 (521)
T ss_pred CcHHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhHH----------HHH
Confidence 4566677777899999999999999999999999999999999 6666667777777777 555563 456
Q ss_pred HHHHHHHHHHHHHHHhh
Q 009308 489 KMLTIVSFINICYFWWI 505 (538)
Q Consensus 489 ~~la~l~~v~~~~~~~~ 505 (538)
+..++.+++..+++++.
T Consensus 238 ~~~~~~~~~~~~~~~l~ 254 (521)
T KOG0255|consen 238 WIISIPSGLFLLLWFLP 254 (521)
T ss_pred HHHHHHHHHHHHHHHcc
Confidence 66666666555553333
No 262
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=88.20 E-value=13 Score=40.02 Aligned_cols=145 Identities=12% Similarity=0.006 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHH-HHHHHHHHHHhhhhh---hccCCchHHHHHHHHHHHH
Q 009308 41 LLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQ-EGISASTVIFLTCIP---DAFSGRLNVIFYSTISCIL 116 (538)
Q Consensus 41 l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~-~~~~~~~~l~gG~la---D~~lGr~~~i~~~~~~~~~ 116 (538)
.+...-+|+--+.++.+....+- ..+ +.+....-.+.+.. ..+.+++.++.+.+. ++ +||++++.++..+..+
T Consensus 248 ~f~~tG~~~Sf~~~iypt~i~ft-~~~-~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~-fg~~~~~~~~~~~~~~ 324 (461)
T KOG3098|consen 248 FFFYTGLETSFWISIYPTCISFT-RKL-GSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRG-FGRKPTVLIGIIIHLI 324 (461)
T ss_pred HHHHHHHHHHHHHhccchhhhhh-hhc-cCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhh-cccCcchhHHHHHHHH
Confidence 34445566666665555554333 334 44444433333322 333444455555555 45 4999999999999999
Q ss_pred hHHHHHhhhcc--cc---c-----cchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehh
Q 009308 117 GLVLLFITAFE--EA---A-----SPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVW 186 (538)
Q Consensus 117 G~~ll~~~~~~--~~---~-----~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~ 186 (538)
+.++..++... |. + ...+.....+.=++.|+|-+......+.++++.+|+ ++..+|++
T Consensus 325 ~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~------------~~~~~fsi 392 (461)
T KOG3098|consen 325 GFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYPD------------DRAQAFSL 392 (461)
T ss_pred HHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcC------------chHHHHHH
Confidence 88776654321 11 0 011233445555689999999999999999999965 23344555
Q ss_pred hHHHHHHHHHHHHH
Q 009308 187 WLIPFFFSVIASVQ 200 (538)
Q Consensus 187 ~y~~~niG~~i~~~ 200 (538)
+-+--.+++.++..
T Consensus 393 ~kfyq~~~s~v~~f 406 (461)
T KOG3098|consen 393 FKFYQSVASCVAFF 406 (461)
T ss_pred HHHHHHHHHHHHhh
Confidence 55555555555433
No 263
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=87.96 E-value=7.6 Score=41.45 Aligned_cols=122 Identities=12% Similarity=-0.046 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 36 KAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 36 ~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
+.+.+++.+-...-..|+++...|-.-+.. - |++.+.+|.+.......+.++.++.|.++||.=.-|+++++......
T Consensus 266 ~~F~il~~~ygi~~g~F~~l~~~l~~~l~~-s-gY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~ 343 (480)
T KOG2563|consen 266 RQFIILAICYGIGLGLFNSLSTLLNLALCP-S-GYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFAL 343 (480)
T ss_pred ccHHHHHHHHhhhHHHHHHHHHHhhhcccc-c-cCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHH
Confidence 455555555566666677777766644432 3 77889999999999999999999999999996333455555555555
Q ss_pred HhHHHHHhhhccccccchhHHHHHHHHHHHHHhchhhcccchhhhhcc
Q 009308 116 LGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQ 163 (538)
Q Consensus 116 ~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~ 163 (538)
++...+......+ ...+.++..-.+.|...-+..|.-.-++.|.
T Consensus 344 v~~~~l~~~t~~~----~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~ 387 (480)
T KOG2563|consen 344 VGTLMLLTCTLFL----GDSVIVFTTCGLLGFFGTGYLPIGFELGVET 387 (480)
T ss_pred HHHHHHHHhhccC----CceEehhhhHHHHHHhhcCCCCcceeeeeee
Confidence 5532222222111 1223344444555555555666555566554
No 264
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=87.62 E-value=27 Score=37.93 Aligned_cols=52 Identities=13% Similarity=-0.073 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHhhhhHHHHHhhCCcchhhHHHHHHHHHHH-HHHHHHHHhhh
Q 009308 418 QFCLLGLMKGLARDGINKFLADQFPEPMHDCVSAITELVTG-FASFVNIVSVY 469 (538)
Q Consensus 418 ~~~l~glgE~l~~p~~~~~~~~~aP~~~rg~~~gl~~l~~~-iG~~l~~~l~~ 469 (538)
+.++.-.++--..-+.-|.++-..+++.|-.+-+..-.... +|-.+|+.+..
T Consensus 382 ~~v~~k~~kYsl~dp~kEmly~pld~e~K~K~Ka~iD~v~~r~Gks~gs~i~~ 434 (472)
T TIGR00769 382 QNILSKSTKYSLFDATKEMAYIPLDEEQKVKGKAAIDVVAARLGKSGGALIQQ 434 (472)
T ss_pred HHHHHHHhhhccccHHHHHhcccCCHHHHHHhHhhhhhhhhhhhhHHHHHHHH
Confidence 66777778888888999999999999999999888766554 55555555443
No 265
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=86.84 E-value=1.6 Score=49.32 Aligned_cols=145 Identities=9% Similarity=-0.011 Sum_probs=94.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH----HHHhhhh-----ccC--------------CCCC--CCC---Cccc--hhhHhHH
Q 009308 368 VRIWAGMVLSTICCAVAWRVEV----HRLIIIN-----NKG--------------LLGN--TDE---VIPM--SIFWLAP 417 (538)
Q Consensus 368 ~ri~iG~~l~~l~~~~~~~~e~----~~~~~~~-----~~g--------------~~~~--~~~---~~~~--s~~~li~ 417 (538)
+.|++|.++++++.++.++-+. ++++... +.. .+.. .+. .... -+..++.
T Consensus 163 r~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~ 242 (735)
T KOG3626|consen 163 RWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFL 242 (735)
T ss_pred ceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHH
Confidence 6789999999999888776533 1111110 000 0000 011 1122 2234556
Q ss_pred HHHHHHHHHHHHhhhhHHHHHhhCCcchhhHHHHHHHHHHHHHHHHHHHhhh-ccc---cc-cc-c--cCCCcchhH---
Q 009308 418 QFCLLGLMKGLARDGINKFLADQFPEPMHDCVSAITELVTGFASFVNIVSVY-FNK---SL-FA-D--TLNSSRLDE--- 486 (538)
Q Consensus 418 ~~~l~glgE~l~~p~~~~~~~~~aP~~~rg~~~gl~~l~~~iG~~l~~~l~~-~~~---~~-~~-~--~~n~~~l~~--- 486 (538)
.-++.|+|+--..+.|.+++=+.+-++...++.|+.+....+|=++|-++++ ..+ ++ .+ . +-+|++---
T Consensus 243 ~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWW 322 (735)
T KOG3626|consen 243 GQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWW 322 (735)
T ss_pred HHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHH
Confidence 6689999999999999999999999999999999999999888888877777 333 23 11 1 233333211
Q ss_pred -HHHHHHHHHHHHHHHHHhhhcccccC
Q 009308 487 -YYKMLTIVSFINICYFWWISTFYTRG 512 (538)
Q Consensus 487 -~f~~la~l~~v~~~~~~~~~~~~~~~ 512 (538)
=|.+.++++++..+-++++=|.+...
T Consensus 323 lGFLi~g~~~~~~a~p~f~fPk~lp~~ 349 (735)
T KOG3626|consen 323 LGFLICGALLLFSAVPLFFFPKELPKS 349 (735)
T ss_pred HHHHHHHHHHHHHHHHHHhCcccCccc
Confidence 24456777787777777777766543
No 266
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=85.81 E-value=6.5 Score=35.81 Aligned_cols=59 Identities=15% Similarity=0.126 Sum_probs=53.2
Q ss_pred hhhHhHHHHHHHHHHHHHHhhhhHHHHHhhCCcchhhHHHHHHHHHHHHHHHHHHHhhh
Q 009308 411 SIFWLAPQFCLLGLMKGLARDGINKFLADQFPEPMHDCVSAITELVTGFASFVNIVSVY 469 (538)
Q Consensus 411 s~~~li~~~~l~glgE~l~~p~~~~~~~~~aP~~~rg~~~gl~~l~~~iG~~l~~~l~~ 469 (538)
+.+.+++.-++.|+|+.+..+..-.++.+.+.++.+++..|+++.....+..+|.++.-
T Consensus 88 ~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~ 146 (156)
T PF05978_consen 88 NSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLF 146 (156)
T ss_pred hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 35667888899999999999999999999999999999999999999988888877655
No 267
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=84.40 E-value=21 Score=38.22 Aligned_cols=110 Identities=13% Similarity=0.170 Sum_probs=81.4
Q ss_pred HhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhhccccc--c
Q 009308 54 AVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITAFEEAA--S 131 (538)
Q Consensus 54 g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~~~~~~--~ 131 (538)
+.-+.++.|+.. - |++....|..-+.-......+.++..++-+|+ |--|+=.++.....+...+...+-..+.+ +
T Consensus 276 sf~~lmt~yl~~-~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ri-Glvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~ 352 (432)
T PF06963_consen 276 SFGGLMTAYLKS-Q-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRI-GLVRAGLWSLWWQWVCLALCVVSFWAPGSPFS 352 (432)
T ss_pred cCcHHHHHHHHH-C-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhhHHHHHHHHHHHHHHHHHHHhcCCCCch
Confidence 445678888875 5 89999999998888888899999999999995 99999999988876554443332222221 1
Q ss_pred chhHHHHHHHHHHHHHhchhhcccchhhhhccccc
Q 009308 132 PLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRA 166 (538)
Q Consensus 132 ~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~ 166 (538)
..+...++.+..+.=+|-=++.-+..-++-|..|+
T Consensus 353 ~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~ 387 (432)
T PF06963_consen 353 SISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPE 387 (432)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCH
Confidence 23556677777777777777888888888887665
No 268
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=81.00 E-value=18 Score=38.69 Aligned_cols=53 Identities=13% Similarity=0.074 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHhh---CCcchhhHHHHHHHHHHHHHHHHHHHhhh
Q 009308 416 APQFCLLGLMKGLARDGINKFLADQ---FPEPMHDCVSAITELVTGFASFVNIVSVY 469 (538)
Q Consensus 416 i~~~~l~glgE~l~~p~~~~~~~~~---aP~~~rg~~~gl~~l~~~iG~~l~~~l~~ 469 (538)
....++.++|..+..+..-+...+. -|++ +|..++..+...++|+.++..+++
T Consensus 90 ~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G 145 (433)
T PF03092_consen 90 VVLLFLASFGYAFADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSG 145 (433)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3444566677766666655555444 4555 899999999999999999999988
No 269
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=78.51 E-value=12 Score=40.08 Aligned_cols=90 Identities=13% Similarity=0.121 Sum_probs=53.5
Q ss_pred hhhHhHHHHHHHHHHHHHHhhhhHHHHHhhCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccc--CCCcchhHHH
Q 009308 411 SIFWLAPQFCLLGLMKGLARDGINKFLADQFPEPMHDCVSAITELVTGFASFVNIVSVYFNKSLFADT--LNSSRLDEYY 488 (538)
Q Consensus 411 s~~~li~~~~l~glgE~l~~p~~~~~~~~~aP~~~rg~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~--~n~~~l~~~f 488 (538)
..+..+...++.|++..+...+.+.++...-| .+++.++..+++++.++..+--+.....+|+ .+.+- -.||
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~~fp~-----~~~~a~~~G~g~aGv~~s~~~ii~~a~~~~~~~~~~~a-~~YF 178 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAGVFPS-----TYSSAVMSGQGLAGVLTSLAMILVKASGNDSHGLKKSA-LGYF 178 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcccCCH-----HHHHHHHhcchhHHHHHHHHHHHHHHhcCCccchhhhh-hhHH
Confidence 34444555577899999999999998864333 3555666666666666555433222122232 32222 2356
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 009308 489 KMLTIVSFINICYFWWIS 506 (538)
Q Consensus 489 ~~la~l~~v~~~~~~~~~ 506 (538)
.+.+++.+++.+.|..+.
T Consensus 179 ~~a~~v~l~~i~~~~~l~ 196 (437)
T TIGR00939 179 GTPCVVQLICIVCYLLLP 196 (437)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 666677777888877664
No 270
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=76.25 E-value=43 Score=36.33 Aligned_cols=134 Identities=13% Similarity=0.062 Sum_probs=85.7
Q ss_pred hHHHHHHHhcccCC----CCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCch-------HHHHHHHHHHHHhHHHHHh
Q 009308 55 VVAVLITYLTDYPR----NYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRL-------NVIFYSTISCILGLVLLFI 123 (538)
Q Consensus 55 ~~~~l~~yl~~~l~----g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~-------~~i~~~~~~~~~G~~ll~~ 123 (538)
..+.+..|..+..+ | -+...++.-+.-.....++.++-.++--+ +|++ .-+-+|..++.+|++++..
T Consensus 303 ~~ssl~~~a~~~v~~~~~g-~~vp~~~fQslNp~~Iii~~pI~a~l~~~-l~~~~~~ps~~~KFalGl~l~g~~fl~l~~ 380 (498)
T COG3104 303 MGSSLNLYADRNVNRQIFG-FEVPPAWFQSLNPFFIILFSPILAALWTK-LGRGNKQPSTPIKFALGLILAGLGFLILLL 380 (498)
T ss_pred ccchHHHHHHHhhcccccc-eecCHHHHHhhCHHHHHHHHHHHHHHHhH-hhcCCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 34455666654220 2 12334444455555555555555565555 2333 3355677777777777766
Q ss_pred hhcccc--ccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh
Q 009308 124 TAFEEA--ASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL 201 (538)
Q Consensus 124 ~~~~~~--~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~ 201 (538)
...... +...+.++++.+.+++++|.=+..|.-.++++...|+ .-.+...+.|.++...|..++..+
T Consensus 381 ~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~-----------~~~s~~ma~wfLt~a~~~~l~g~v 449 (498)
T COG3104 381 AGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPP-----------ALKSFIMAMWFLTVAAGQTLGGQV 449 (498)
T ss_pred HHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChH-----------HHHHHHHHHHHHHHHHHHHhhcee
Confidence 522211 1224678889999999999999999999999998776 244556688888888888887655
No 271
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=75.21 E-value=21 Score=35.66 Aligned_cols=133 Identities=10% Similarity=-0.013 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhccCCchH---HHHHHHHHHHHhHHHHHhhhccccccchhHHHHHHHHHHHHHhchh
Q 009308 75 AARLVNLQEGISASTVIFLTCIPDAFSGRLN---VIFYSTISCILGLVLLFITAFEEAASPLLKRLILIGVVLLAVGKAG 151 (538)
Q Consensus 75 a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~---~i~~~~~~~~~G~~ll~~~~~~~~~~~~~~~~~~~~l~l~g~g~g~ 151 (538)
-|.+.+.|..++.++.-+...+..+- |.| .+.+...+.+....+-.+..+ ..++..+...-+++..+.-.+.|.
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s--~~~ve~ymqivf~vs~a~l~Lpilt~~-vsP~kes~~~s~i~F~~~E~cvGl 360 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRS--SPKVESYMQIVFLVSIAALLLPILTSS-VSPSKESPSESLIGFCLFEACVGL 360 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcC--CcccchHHHHHHHHHHHHHHHHHHHhc-cCCCcCCchHHHHHHHHHHHHHhh
Confidence 46778888888888777777776662 333 334444443333333333222 111223344557888888889999
Q ss_pred hcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh-------hhhhHHHHHHHHHHHHHHHH
Q 009308 152 MQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL-------SSWRVISTFTVSATGITLFI 221 (538)
Q Consensus 152 ~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~-------~g~~~~F~i~~~~~~l~~~~ 221 (538)
+.|.+.-+=.+..|+ + .++...|||..-.|+=.-++... .+-+..|.+|.+.+.++.+.
T Consensus 361 fwPSimkmRsqyIPE--------e---arstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 361 FWPSIMKMRSQYIPE--------E---ARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred cchHHHHHHHhhCCH--------H---HHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHH
Confidence 999998888777765 2 34566788776666544444332 46667788888888776553
No 272
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=74.37 E-value=1.4e+02 Score=32.66 Aligned_cols=33 Identities=24% Similarity=0.160 Sum_probs=28.5
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCc
Q 009308 70 YNVVEAARLVNLQEGISASTVIFLTCIPDAFSGR 103 (538)
Q Consensus 70 ~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr 103 (538)
.+..||.-....+..++-++.+++|.+.-.+ .+
T Consensus 173 tt~~eAKRfYpl~g~ganigli~sG~~~~~~-~~ 205 (491)
T PF03219_consen 173 TTVEEAKRFYPLFGLGANIGLIFSGQLTSYF-SS 205 (491)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 6789999999999999999999999877663 44
No 273
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=71.90 E-value=89 Score=33.24 Aligned_cols=59 Identities=12% Similarity=0.088 Sum_probs=47.6
Q ss_pred chhhHhHHHHHHHHHHHHHHhhhhHHHHHhhCCcchhhHHHHHHHHHHHHHHHHHHHhhh
Q 009308 410 MSIFWLAPQFCLLGLMKGLARDGINKFLADQFPEPMHDCVSAITELVTGFASFVNIVSVY 469 (538)
Q Consensus 410 ~s~~~li~~~~l~glgE~l~~p~~~~~~~~~aP~~~rg~~~gl~~l~~~iG~~l~~~l~~ 469 (538)
-+++++...-++.|++-.. -+.-++++++.+|+++--++++....+.-+|..+|++++.
T Consensus 92 ~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQ 150 (412)
T PF01770_consen 92 TSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQ 150 (412)
T ss_pred CcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566666666777776655 6777899999999999999999888888888888888887
No 274
>PF06679 DUF1180: Protein of unknown function (DUF1180); InterPro: IPR009565 This entry consists of several hypothetical eukaryotic proteins thought to be membrane proteins. Their function is unknown.
Probab=58.74 E-value=17 Score=33.29 Aligned_cols=25 Identities=20% Similarity=0.115 Sum_probs=13.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhccc
Q 009308 485 DEYYKMLTIVSFINICYFWWISTFY 509 (538)
Q Consensus 485 ~~~f~~la~l~~v~~~~~~~~~~~~ 509 (538)
..-++++.+++.+.+++|++-..|.
T Consensus 95 ~R~~~Vl~g~s~l~i~yfvir~~R~ 119 (163)
T PF06679_consen 95 KRALYVLVGLSALAILYFVIRTFRL 119 (163)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhh
Confidence 3345566666666666555544433
No 275
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=58.63 E-value=69 Score=33.05 Aligned_cols=100 Identities=14% Similarity=0.103 Sum_probs=58.0
Q ss_pred HHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHHHHhhh-cc
Q 009308 49 KLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVLLFITA-FE 127 (538)
Q Consensus 49 r~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~ll~~~~-~~ 127 (538)
.+..|.-..+|.......+ | ...-+.+.......+ ++.+.+..+ +|-|+|+.++...|.. .+++ ..
T Consensus 41 ~f~a~~gl~nlq~~vn~~l-g--~~sl~~~y~~l~~s~----m~~~~~Ir~-~g~K~tm~lav~~Y~l-----yiA~Nl~ 107 (390)
T KOG3097|consen 41 TFTAYLGLQNLQTSVNYDL-G--TVSLGALYLSLIDSS----MFMPLLIRF-LGTKWTMVLAVFPYAL-----YIAANLE 107 (390)
T ss_pred HHHHHHHHHHHHHHHhcCc-c--cchhhhhhHHHHHHH----HHHHHHHHH-HhhHHHHHHHHHHHHH-----HHHhhcc
Confidence 3444445567777776655 3 233333333333333 333356665 6999999998888874 2232 22
Q ss_pred ccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccc
Q 009308 128 EAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRA 166 (538)
Q Consensus 128 ~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~ 166 (538)
| .+..++.+=...|.|.|..-..-.+++++.-+.
T Consensus 108 p-----r~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ 141 (390)
T KOG3097|consen 108 P-----RYETLVPAGLVLGMAAGPIWASKGTYLTPMGQN 141 (390)
T ss_pred h-----hHHhhccHHHhhccccccccccCcceecHHHHH
Confidence 2 344555666678888887777766666665443
No 276
>PF15471 TMEM171: Transmembrane protein family 171
Probab=54.64 E-value=36 Score=33.49 Aligned_cols=65 Identities=14% Similarity=0.173 Sum_probs=36.7
Q ss_pred ccccccCCCcch---h---HH---HHHHHHHHHHHHHHHHhhhcccccCCCccccccCCCcCCCc-cccceEEEe
Q 009308 473 SLFADTLNSSRL---D---EY---YKMLTIVSFINICYFWWISTFYTRGGDTAEADVIPQATGRE-EEEDFKVIV 537 (538)
Q Consensus 473 ~~~~~~~n~~~l---~---~~---f~~la~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 537 (538)
+|-.+.+|+... + += .-+++-+-++.+++|++++.--|+.+-+..+|..++..++. ..|.|.|.|
T Consensus 138 ~w~~~~lN~T~t~~~e~q~CGFLslQImGPlIVl~GLCFFVVAHvKKr~nln~~qd~se~Ee~~~qs~Ep~qVTV 212 (319)
T PF15471_consen 138 GWPQEPLNETDTSDSEPQICGFLSLQIMGPLIVLVGLCFFVVAHVKKRNNLNGSQDASESEEGQTQSTEPVQVTV 212 (319)
T ss_pred CCccccccCCCCCCCCccccceeehhhhhhHHHHHhhhhhheeeeeeccCCCcccCccccccCCCCCCCCEEEEe
Confidence 676666665331 0 11 23455566666777777765544444444555555555455 778888865
No 277
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=50.05 E-value=14 Score=36.71 Aligned_cols=102 Identities=19% Similarity=0.165 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhh---------hccCCchHHHHHHHHHH
Q 009308 44 LIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIP---------DAFSGRLNVIFYSTISC 114 (538)
Q Consensus 44 ~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~la---------D~~lGr~~~i~~~~~~~ 114 (538)
.-+.+....-.+.+.+.+|+++ . +.++.+++.+...-+.+..+..++.|... || +||++.-.
T Consensus 25 GHmlNDitAScWFTYlllfltq-i-glsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr-~G~~~~wh------ 95 (412)
T KOG4830|consen 25 GHMLNDITASCWFTYLLLFLTQ-I-GLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDR-IGRRMSWH------ 95 (412)
T ss_pred hHHHhhHHHHHHHHHHHHHHHH-h-cCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhh-hcceeeee------
Confidence 3455566666677888899987 6 68888888888888888888888887554 67 49877542
Q ss_pred HHhHHHHHhhhcc-------cc-----ccchhHHHHHHHHHHHHHhchhhcc
Q 009308 115 ILGLVLLFITAFE-------EA-----ASPLLKRLILIGVVLLAVGKAGMQH 154 (538)
Q Consensus 115 ~~G~~ll~~~~~~-------~~-----~~~~~~~~~~~~l~l~g~g~g~~~~ 154 (538)
.+|+++..++-.. -. ....+..++.+++++.|+|.+..|-
T Consensus 96 ~~gt~lVslSf~~ifg~a~iF~~~~~~s~vanlglyaialvVFgv~~A~~ke 147 (412)
T KOG4830|consen 96 LIGTVLVSLSFPMIFGFAKIFLCKSTTSEVANLGLYAIALVVFGVGWASVKE 147 (412)
T ss_pred ecccEEEEEechhhcCceeEEeeccHHHHHHHhHHHHHHhheeeeeeecccc
Confidence 2333332222100 00 1113566778888888888776543
No 278
>KOG4255 consensus Uncharacterized conserved protein [Function unknown]
Probab=47.65 E-value=3.4e+02 Score=28.12 Aligned_cols=113 Identities=10% Similarity=0.092 Sum_probs=62.7
Q ss_pred cchhhHhHHHHHHHHHHHHHHhhhhHHHHHhhCCcchhhHHHHHHHHHHHHHHHHHHHhhhccc---cc----------c
Q 009308 409 PMSIFWLAPQFCLLGLMKGLARDGINKFLADQFPEPMHDCVSAITELVTGFASFVNIVSVYFNK---SL----------F 475 (538)
Q Consensus 409 ~~s~~~li~~~~l~glgE~l~~p~~~~~~~~~aP~~~rg~~~gl~~l~~~iG~~l~~~l~~~~~---~~----------~ 475 (538)
..|+-.+... +.+++.+...+++.+-|..+.=|.-.++ ++...+++..+=.++.-... -| +
T Consensus 110 ~hS~afl~L~-F~LAivdc~SnVtFLPFMs~lpp~fL~a-----fFvG~GLSaLlPsllaLaQGtg~~~C~~n~t~~r~f 183 (439)
T KOG4255|consen 110 LHSWAFLSLL-FGLAIVDCTSNVTFLPFMSQLPPAFLNA-----FFVGMGLSALLPSLLALAQGTGRLECDLNGTPGRPF 183 (439)
T ss_pred cchHHHHHHH-HHHHHHHhhccchhhhhhhhCChHHHHH-----HHHhccHHHHHHHHHHHHccCCceeecCCCCCCCCC
Confidence 3455545554 4568899999999999997766644443 33334444333222211221 11 2
Q ss_pred cccCCCcchhHHHHHHHHHHHHHHHHHHhhhcccccCC-----CccccccCCCcCCCccc
Q 009308 476 ADTLNSSRLDEYYKMLTIVSFINICYFWWISTFYTRGG-----DTAEADVIPQATGREEE 530 (538)
Q Consensus 476 ~~~~n~~~l~~~f~~la~l~~v~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 530 (538)
|++.. -..||+.+.+++..++..|....|--.-++ .-++++.++...+||++
T Consensus 184 P~rFs---~s~FFl~l~~~~~~alaAF~vL~r~~~~~~~s~~~~~~p~~~l~si~~~ee~ 240 (439)
T KOG4255|consen 184 PPRFS---VSTFFLALFAFTCAALAAFFVLYRLGAHWPSSTTGELEPQLQLGSIGAEEET 240 (439)
T ss_pred CCCcc---HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCccccCCCCccccc
Confidence 22211 245888899999888888887766432222 11134555555555544
No 279
>PRK11715 inner membrane protein; Provisional
Probab=42.98 E-value=3.2e+02 Score=29.37 Aligned_cols=73 Identities=11% Similarity=0.024 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCccchhhHhHHHHHHHHHHHHHHhhhhHHHHHhhCCcchhhHHHH
Q 009308 372 AGMVLSTICCAVAWRVEVHRLIIINNKGLLGNTDEVIPMSIFWLAPQFCLLGLMKGLARDGINKFLADQFPEPMHDCVSA 451 (538)
Q Consensus 372 iG~~l~~l~~~~~~~~e~~~~~~~~~~g~~~~~~~~~~~s~~~li~~~~l~glgE~l~~p~~~~~~~~~aP~~~rg~~~g 451 (538)
.|+++.++.|+...+.|..... ++++ .||.+.|++-++..--.+++. ++-|+..|
T Consensus 306 YgiLFI~LTF~~fFlfE~~~~~---------------~iHp----iQYlLVGlAl~lFYLLLLSlS------EHigF~~A 360 (436)
T PRK11715 306 YAILFIALTFAAFFLFELLKKL---------------RIHP----VQYLLVGLALVLFYLLLLSLS------EHIGFTLA 360 (436)
T ss_pred HHHHHHHHHHHHHHHHHHhcCc---------------eecH----HHHHHHHHHHHHHHHHHHHHH------hhhchHHH
Confidence 7888889999888888753211 2222 688888888888888777775 44456666
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 009308 452 ITELVTGFASFVNIVSVY 469 (538)
Q Consensus 452 l~~l~~~iG~~l~~~l~~ 469 (538)
..-.+.+.-..++.++..
T Consensus 361 YliAa~a~v~li~~Y~~~ 378 (436)
T PRK11715 361 YLIAALACVLLIGFYLSA 378 (436)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 666555555555555554
No 280
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=42.81 E-value=4.8e+02 Score=28.48 Aligned_cols=53 Identities=6% Similarity=-0.114 Sum_probs=42.9
Q ss_pred HHHHHHHHHHhh----hhHHHHHhhCCcchhhHHHHHHHHHHHHHHHHHHHhhh-ccc
Q 009308 420 CLLGLMKGLARD----GINKFLADQFPEPMHDCVSAITELVTGFASFVNIVSVY-FNK 472 (538)
Q Consensus 420 ~l~glgE~l~~p----~~~~~~~~~aP~~~rg~~~gl~~l~~~iG~~l~~~l~~-~~~ 472 (538)
++.-++|+.-+. -...++.+..+.+...+..+++.....+|..+|+.+.. +.+
T Consensus 148 lfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 148 LFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444567776554 34688999999999999999999999999999999988 443
No 281
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=42.14 E-value=2.4e+02 Score=29.94 Aligned_cols=86 Identities=13% Similarity=0.139 Sum_probs=48.9
Q ss_pred hHHHHHHHHHHHHHHhhhhHHHHHhhCCcchhhHHHHHHHHHHHHHHHHHHHhhhcccccccccCCCcchhHHHHHHHHH
Q 009308 415 LAPQFCLLGLMKGLARDGINKFLADQFPEPMHDCVSAITELVTGFASFVNIVSVYFNKSLFADTLNSSRLDEYYKMLTIV 494 (538)
Q Consensus 415 li~~~~l~glgE~l~~p~~~~~~~~~aP~~~rg~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~n~~~l~~~f~~la~l 494 (538)
.+...++.++|.....-..+-.+...-|+-.++.+ ...++++.+..++.-+.+.-.+| .+.+ --.||.+-.++
T Consensus 120 t~~~vv~~~~a~a~~qgs~~G~a~~~P~~ytqavm-----~G~a~aG~l~Sl~~i~tka~~~~-~~~s-A~~yF~~s~~~ 192 (406)
T KOG1479|consen 120 TLIIVVLLNLANAVVQGSLYGLAGLFPSEYTQAVM-----SGQALAGTLTSLLRILTKAAFSD-SRTS-ALIYFITSTVI 192 (406)
T ss_pred HHHHHHHHhhhhhhhccchhhhhhcCCHHHHHHHH-----hcchhHhHHHHHHHHHHHHhcCC-CCce-eehhHHHHHHH
Confidence 44455778999999998888888655554444443 33444444443332222211222 2222 23467777778
Q ss_pred HHHHHHHHHhhhc
Q 009308 495 SFINICYFWWIST 507 (538)
Q Consensus 495 ~~v~~~~~~~~~~ 507 (538)
.+++.+.|....|
T Consensus 193 ~llC~i~y~~l~~ 205 (406)
T KOG1479|consen 193 LLLCFVLYLVLPK 205 (406)
T ss_pred HHHHHHHHHHhhc
Confidence 8888888885443
No 282
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=41.98 E-value=3.5e+02 Score=28.96 Aligned_cols=73 Identities=11% Similarity=0.020 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCccchhhHhHHHHHHHHHHHHHHhhhhHHHHHhhCCcchhhHHHH
Q 009308 372 AGMVLSTICCAVAWRVEVHRLIIINNKGLLGNTDEVIPMSIFWLAPQFCLLGLMKGLARDGINKFLADQFPEPMHDCVSA 451 (538)
Q Consensus 372 iG~~l~~l~~~~~~~~e~~~~~~~~~~g~~~~~~~~~~~s~~~li~~~~l~glgE~l~~p~~~~~~~~~aP~~~rg~~~g 451 (538)
.|+++.++.|+...+.|...+. ++++ .||.+.|++-++...-.+++. ++-|+..|
T Consensus 300 YgiLFI~LTF~~fflfE~~~~~---------------~iHp----iQY~LVGlAl~lFYlLLLSlS------Ehi~F~~A 354 (430)
T PF06123_consen 300 YGILFIGLTFLAFFLFELLSKL---------------RIHP----IQYLLVGLALVLFYLLLLSLS------EHIGFNLA 354 (430)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC---------------cccH----HHHHHHHHHHHHHHHHHHHHH------hhhchHHH
Confidence 7888888998888888854321 2222 688888888888877777765 34456665
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 009308 452 ITELVTGFASFVNIVSVY 469 (538)
Q Consensus 452 l~~l~~~iG~~l~~~l~~ 469 (538)
..-.+.+.-..++.++..
T Consensus 355 YliAa~a~i~Li~~Y~~~ 372 (430)
T PF06123_consen 355 YLIAALACIGLISLYLSS 372 (430)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 555555555555555544
No 283
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=39.91 E-value=9.6 Score=38.75 Aligned_cols=82 Identities=11% Similarity=0.229 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhhhhHHHHHhhCCcchhhHHHHHHHHHHHHHHHHHHHhhhcccccccccCCCcchhHHHHHHHHHHHHHH
Q 009308 420 CLLGLMKGLARDGINKFLADQFPEPMHDCVSAITELVTGFASFVNIVSVYFNKSLFADTLNSSRLDEYYKMLTIVSFINI 499 (538)
Q Consensus 420 ~l~glgE~l~~p~~~~~~~~~aP~~~rg~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~n~~~l~~~f~~la~l~~v~~ 499 (538)
++.+.+-.+...+.+.++...-|+..+ ..+..+++++.+..++--+.. +..++.+.+-. .||.+..++.+++.
T Consensus 5 ~~~~~~~~~~q~s~~glas~~p~~y~~-----a~~~Gq~~aGv~~s~l~ii~~-~~~~~~~~~a~-~yF~~a~~i~i~~~ 77 (309)
T PF01733_consen 5 ALIGFANAVLQSSLFGLASLFPPKYTQ-----AVMIGQGLAGVIVSLLRIITK-ASGSDVKTSAF-IYFIIAVLIVILCI 77 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEHhhhHHHhccHHHHHhcCCHHHHH-----HHHhhccHHHHHHHHHHHHHH-Hhhhccchhhh-hHHHHHHHHHHHHH
Confidence 466778888888888888765553333 333334444444332221222 22333333322 34555556666677
Q ss_pred HHHHhhhcc
Q 009308 500 CYFWWISTF 508 (538)
Q Consensus 500 ~~~~~~~~~ 508 (538)
+.|..+.|.
T Consensus 78 ~~~~~l~~~ 86 (309)
T PF01733_consen 78 ILYFILPRS 86 (309)
T ss_dssp ---------
T ss_pred HHHHHhccC
Confidence 777666553
No 284
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=39.35 E-value=1e+02 Score=34.38 Aligned_cols=95 Identities=17% Similarity=0.105 Sum_probs=68.8
Q ss_pred hhHhHHHHHHHHHHHHHHhhhhHHHHHhhCC----cc--hhhHHHHHHHHHHHHHHHHHHHhhhcccccccccCCCcchh
Q 009308 412 IFWLAPQFCLLGLMKGLARDGINKFLADQFP----EP--MHDCVSAITELVTGFASFVNIVSVYFNKSLFADTLNSSRLD 485 (538)
Q Consensus 412 ~~~li~~~~l~glgE~l~~p~~~~~~~~~aP----~~--~rg~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~n~~~l~ 485 (538)
...+-..+-+.++|.....|...++-.+|-+ +. .+.....-|++...+|..++-.+.- |.+++.. ..
T Consensus 152 ~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~v----yiq~~~~---w~ 224 (571)
T KOG1237|consen 152 LAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLV----YIQDNVG---WK 224 (571)
T ss_pred HHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHH----hhhhccc---ce
Confidence 3344455677888999999999999999988 22 3336677788888888888877766 2222221 12
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccccCC
Q 009308 486 EYYKMLTIVSFINICYFWWISTFYTRGG 513 (538)
Q Consensus 486 ~~f~~la~l~~v~~~~~~~~~~~~~~~~ 513 (538)
.-|.+.++.++++.++|+.-.+.|++++
T Consensus 225 lgf~i~~~~~~lai~iF~~g~~~y~~~~ 252 (571)
T KOG1237|consen 225 LGFGIPTVLNALAILIFLPGFPFYRYKK 252 (571)
T ss_pred eeccHHHHHHHHHHHHHHcCceeEEeeC
Confidence 3367788899999999998888887766
No 285
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=39.17 E-value=5.2e+02 Score=27.75 Aligned_cols=60 Identities=13% Similarity=0.198 Sum_probs=46.0
Q ss_pred chhhHhHHHHHHHHHHHHHHhhhhHHHHHhhCCcchhhHHHHHHHHHHHHHHHHHHHhhh
Q 009308 410 MSIFWLAPQFCLLGLMKGLARDGINKFLADQFPEPMHDCVSAITELVTGFASFVNIVSVY 469 (538)
Q Consensus 410 ~s~~~li~~~~l~glgE~l~~p~~~~~~~~~aP~~~rg~~~gl~~l~~~iG~~l~~~l~~ 469 (538)
.+...++...++.=+|=-....+....+-+..|++.||...|+-....++-..+.-.++-
T Consensus 354 ~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~i 413 (432)
T PF06963_consen 354 ISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTI 413 (432)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 455555555555556666667777777888999999999999999999999888776655
No 286
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=38.23 E-value=1.4e+02 Score=21.64 Aligned_cols=34 Identities=12% Similarity=-0.049 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHH
Q 009308 82 QEGISASTVIFLTCIPDAFSGRLNVIFYSTISCI 115 (538)
Q Consensus 82 ~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~ 115 (538)
....+.+.....|+..|+++|..+...+..++..
T Consensus 9 ~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG 42 (55)
T PF09527_consen 9 TMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLG 42 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 3344566777888999999998655544444333
No 287
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=37.94 E-value=93 Score=30.78 Aligned_cols=60 Identities=15% Similarity=0.150 Sum_probs=30.5
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhh-cccccc---cccCCCcchhHHHHHHHHHHHHHHHHHHhhhc
Q 009308 443 EPMHDCVSAITELVTGFASFVNIVSVY-FNKSLF---ADTLNSSRLDEYYKMLTIVSFINICYFWWIST 507 (538)
Q Consensus 443 ~~~rg~~~gl~~l~~~iG~~l~~~l~~-~~~~~~---~~~~n~~~l~~~f~~la~l~~v~~~~~~~~~~ 507 (538)
+-+|...+|+-.+.++..+.+.+...+ +- |+ ++..+.+-+. ++-.++.+++..+|.+...
T Consensus 74 pii~~iGLglg~liW~s~n~l~Gw~~grfG--lFg~~~~~~~~~~Ln---~~G~~l~~~~~~~f~fik~ 137 (254)
T PF07857_consen 74 PIIKTIGLGLGMLIWGSVNCLTGWASGRFG--LFGLDPQVPSSPWLN---YIGVALVLVSGIIFSFIKS 137 (254)
T ss_pred hHhhhhhhHHHHHHHHHHHHHHHHHHhhce--eccccccccchhHHH---HHHHHHHHHHHHheeeecC
Confidence 345566666666666666666666655 21 32 2222222222 2334556666666665533
No 288
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=37.93 E-value=3e+02 Score=29.25 Aligned_cols=136 Identities=8% Similarity=0.026 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHhHHH
Q 009308 41 LLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVNLQEGISASTVIFLTCIPDAFSGRLNVIFYSTISCILGLVL 120 (538)
Q Consensus 41 l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~~~i~~~~~~~~~G~~l 120 (538)
+..+-++|-+...|+.+.+. |=.+ . .-...+-.+....|+.+.+++.--.-++ |-|-+.+-.++..+-.++
T Consensus 252 L~lVY~aEY~InqGv~~tl~-fp~~-~-~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~------rir~lwils~LQ~~nl~~ 322 (402)
T PF02487_consen 252 LFLVYFAEYFINQGVAPTLL-FPNS-F-FSPRDQYRWYQLLYQLGVFISRSSLPFF------RIRRLWILSLLQVINLVF 322 (402)
T ss_pred HHHHHHHHHHHHhchHHHhc-CCcc-C-CCHHHHHHHHHHHHHHHHhhhhcceeee------ehhhHHHHHHHHHHHHHH
Confidence 44556666555555555542 1111 2 2223444455566676666665443332 223344445554444444
Q ss_pred HHhhhc---cccccchhHHHHHHHHHHHHHhchhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHH
Q 009308 121 LFITAF---EEAASPLLKRLILIGVVLLAVGKAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIA 197 (538)
Q Consensus 121 l~~~~~---~~~~~~~~~~~~~~~l~l~g~g~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i 197 (538)
+.+.+. .| +.+..++..+..|+-.|....|....+.|..++ ++| +-..+.-.++-++|.++
T Consensus 323 ~~l~s~~~fip-----si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~--------~~R---EFslg~vsvsds~GI~l 386 (402)
T PF02487_consen 323 LLLQSWYRFIP-----SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPP--------EDR---EFSLGAVSVSDSLGILL 386 (402)
T ss_pred HHHHHHHHHhh-----HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCH--------HHH---HHHHHHHHHHhhHHHHH
Confidence 333321 22 355666667789999999999999999987654 232 33334445566666666
Q ss_pred HHHh
Q 009308 198 SVQL 201 (538)
Q Consensus 198 ~~~~ 201 (538)
+..+
T Consensus 387 Agll 390 (402)
T PF02487_consen 387 AGLL 390 (402)
T ss_pred HHHH
Confidence 5543
No 289
>PF12606 RELT: Tumour necrosis factor receptor superfamily member 19; InterPro: IPR022248 The members of tumor necrosis factor receptor (TNFR) superfamily have been designated as the "guardians of the immune system" due to their roles in immune cell proliferation, differentiation, activation, and death (apoptosis). RELT (receptor expressed in lymphoid tissues) is a member of the TNFR superfamily. The messenger RNA of RELT is especially abundant in hematologic tissues such as spleen, lymph node, and peripheral blood leukocytes as well as in leukemias and lymphomas. RELT is able to activate the NF-kappaB pathway and selectively binds tumor necrosis factor receptor-associated factor 1 []. RELT like proteins 1 and 2 (RELL1 and RELL2) are two RELT homologues that bind to RELT. The expression of RELL1 at the mRNA level is ubiquitous, whereas expression of RELL2 mRNA is more restricted to particular tissues [].
Probab=36.86 E-value=69 Score=23.20 Aligned_cols=14 Identities=7% Similarity=-0.171 Sum_probs=8.5
Q ss_pred HhhhcccccCCCcc
Q 009308 503 WWISTFYTRGGDTA 516 (538)
Q Consensus 503 ~~~~~~~~~~~~~~ 516 (538)
.-.+|+|.||-.-|
T Consensus 21 ~~~~K~ygYkht~d 34 (50)
T PF12606_consen 21 CTTLKAYGYKHTVD 34 (50)
T ss_pred HHHhhccccccccC
Confidence 35567787765443
No 290
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=35.02 E-value=2.2e+02 Score=29.48 Aligned_cols=15 Identities=7% Similarity=0.124 Sum_probs=6.4
Q ss_pred hhhHHHHHHHHHHHH
Q 009308 185 VWWLIPFFFSVIASV 199 (538)
Q Consensus 185 ~~~y~~~niG~~i~~ 199 (538)
.|.|+...+=-+.+.
T Consensus 79 ~w~y~lla~~Dv~aN 93 (334)
T PF06027_consen 79 WWKYFLLALLDVEAN 93 (334)
T ss_pred HHHHHHHHHHHHHHH
Confidence 345554443333333
No 291
>COG5058 LAG1 Protein transporter of the TRAM (translocating chain-associating membrane) superfamily, longevity assurance factor [Intracellular trafficking and secretion]
Probab=34.46 E-value=38 Score=34.25 Aligned_cols=52 Identities=21% Similarity=0.234 Sum_probs=30.5
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHhhhcc-cccCCCccccccCCCcCCCccccc
Q 009308 480 NSSRLDEYYKMLTIVSFINICYFWWISTF-YTRGGDTAEADVIPQATGREEEED 532 (538)
Q Consensus 480 n~~~l~~~f~~la~l~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 532 (538)
+...++.++.++.++-+++...+.++.|- |+-=+ +.|++|.++..++|+|+|
T Consensus 334 cwisl~i~~iLl~aLQlvniyWl~lIvRvayRv~~-~~e~~D~RSd~e~ee~s~ 386 (395)
T COG5058 334 CWISLPIVFILLQALQLVNIYWLFLIVRVAYRVIW-EGELKDERSDDESEEESD 386 (395)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccccccccccccCChhh
Confidence 34556778888888888888766665543 22111 224555555555554444
No 292
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=34.12 E-value=6.4e+02 Score=27.38 Aligned_cols=30 Identities=20% Similarity=0.050 Sum_probs=26.8
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhhhhhhc
Q 009308 70 YNVVEAARLVNLQEGISASTVIFLTCIPDA 99 (538)
Q Consensus 70 ~s~~~a~~i~~~~~~~~~~~~l~gG~laD~ 99 (538)
.+..||.-....+..++-++.+++|.+...
T Consensus 158 ~t~~qakRfy~l~~~ganlg~i~sg~~~~~ 187 (472)
T TIGR00769 158 TTIDEAKRFYALFGLGANVALIFSGRTIKY 187 (472)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999999999999999999987655
No 293
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=34.00 E-value=2.6e+02 Score=30.03 Aligned_cols=115 Identities=8% Similarity=-0.038 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhccCCch-HHHHHHHHHHHHhHHHHHhhhcccc-cc--c-hhHHHHHHHHHHHHHh
Q 009308 74 EAARLVNLQEGISASTVIFLTCIPDAFSGRL-NVIFYSTISCILGLVLLFITAFEEA-AS--P-LLKRLILIGVVLLAVG 148 (538)
Q Consensus 74 ~a~~i~~~~~~~~~~~~l~gG~laD~~lGr~-~~i~~~~~~~~~G~~ll~~~~~~~~-~~--~-~~~~~~~~~l~l~g~g 148 (538)
..-.....|+.+-.++..+..+..= -+++ +.+.+.++.=.+-.-++.++...+. .. . .+-+..++..++.|+.
T Consensus 308 ~~~i~~~~fNvgD~vGR~~~~~~~~--p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~glt 385 (437)
T TIGR00939 308 YPIICFLLFNLFDWLGRSLTSKFMW--PDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFS 385 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeEe--eCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHh
Confidence 3445567777777777776654311 1222 2444445444443333334433221 00 0 1345666778899999
Q ss_pred chhhcccchhhhhccccccCccccCcccccceeeeehhhHHHHHHHHHHHHHh
Q 009308 149 KAGMQHFLGPFLADQLRAHEPIKLNISEHRVSARKRVWWLIPFFFSVIASVQL 201 (538)
Q Consensus 149 ~g~~~~~~~~~~ad~~~~~~~~~~~~~~r~~~~~~f~~~y~~~niG~~i~~~~ 201 (538)
+|........++.+..++ +||+ .+-+...++.++|..+|..+
T Consensus 386 nGy~~s~~m~~~p~~v~~--------~e~e---~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 386 NGYLGSLSMCLAPRQVDP--------HERE---VAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred hhHHHHHHHHhcCCCCCH--------HHHH---HHHHHHHHHHHHHHHHHHHH
Confidence 999998888888777543 4443 22244455677777766543
No 294
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=32.53 E-value=1.6e+02 Score=27.80 Aligned_cols=59 Identities=17% Similarity=0.109 Sum_probs=48.6
Q ss_pred hhhHhHHHHHHHHHHHHHHhhhhHHHHHhhCCc-chhhHHHHHHHH-HHHHHHHHHHHhhh
Q 009308 411 SIFWLAPQFCLLGLMKGLARDGINKFLADQFPE-PMHDCVSAITEL-VTGFASFVNIVSVY 469 (538)
Q Consensus 411 s~~~li~~~~l~glgE~l~~p~~~~~~~~~aP~-~~rg~~~gl~~l-~~~iG~~l~~~l~~ 469 (538)
+.++++...++.|++.....|....++.+..|+ +.|+...+.... ...+|..+++.+.+
T Consensus 93 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (338)
T COG0477 93 GLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAG 153 (338)
T ss_pred hHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555666668999999999999999999999 778888888888 57888888886666
No 295
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=29.77 E-value=1.8e+02 Score=24.67 Aligned_cols=24 Identities=13% Similarity=-0.006 Sum_probs=15.8
Q ss_pred HHHHHHHhhhhhhccCCchHHHHH
Q 009308 86 SASTVIFLTCIPDAFSGRLNVIFY 109 (538)
Q Consensus 86 ~~~~~l~gG~laD~~lGr~~~i~~ 109 (538)
..+....-||+.|+|.|.++--++
T Consensus 55 GilVGa~iG~llD~~agTsPwglI 78 (116)
T COG5336 55 GILVGAGIGWLLDKFAGTSPWGLI 78 (116)
T ss_pred HHHHHHHHHHHHHHhcCCCcHHHH
Confidence 344455678999999887654333
No 296
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=27.79 E-value=5.2e+02 Score=24.38 Aligned_cols=84 Identities=17% Similarity=0.199 Sum_probs=39.0
Q ss_pred HHHHHHHHHhhhhHHHHHh-hCCcchhhHHHHHHHHHHHHHHHHHHHhhhcccccccccCCCcchhHHHHHHHHHHHHHH
Q 009308 421 LLGLMKGLARDGINKFLAD-QFPEPMHDCVSAITELVTGFASFVNIVSVYFNKSLFADTLNSSRLDEYYKMLTIVSFINI 499 (538)
Q Consensus 421 l~glgE~l~~p~~~~~~~~-~aP~~~rg~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~n~~~l~~~f~~la~l~~v~~ 499 (538)
+.++.-+++......+++. ..+++.++.--.+......+...++..... +.+|..+|. .++ .++..+++++..
T Consensus 118 ~~~i~~G~~~~~~~~~i~~~~~~~~r~~~~k~~~~~~~~~~~w~~~~~~~---~~lp~~inp-~l~--~~~~iiig~i~~ 191 (206)
T PF06570_consen 118 LVSIVGGLVFYFIFKYIYPYKKKKKRPSWWKYILISVLAMVLWIVIFVLT---SFLPPVINP-VLP--PWVYIIIGVIAF 191 (206)
T ss_pred HHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHHHHHHHHHHHHHHH---HHccccCCc-CCC--HHHHHHHHHHHH
Confidence 3344444444555666665 333444444433333333333222222222 134555553 343 233445667777
Q ss_pred HHHHhhhcccc
Q 009308 500 CYFWWISTFYT 510 (538)
Q Consensus 500 ~~~~~~~~~~~ 510 (538)
++.+++.|+|.
T Consensus 192 ~~~~~lkkk~~ 202 (206)
T PF06570_consen 192 ALRFYLKKKYN 202 (206)
T ss_pred HHHHHHHHHhC
Confidence 77777777763
No 297
>KOG2082 consensus K+/Cl- cotransporter KCC1 and related transporters [Inorganic ion transport and metabolism]
Probab=26.85 E-value=4.2e+02 Score=30.55 Aligned_cols=22 Identities=23% Similarity=0.111 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHhHHHHHhhhc
Q 009308 105 NVIFYSTISCILGLVLLFITAF 126 (538)
Q Consensus 105 ~~i~~~~~~~~~G~~ll~~~~~ 126 (538)
+++.+|+++..+|-.+..++..
T Consensus 497 wVi~IGsFlST~GAgLQsLtgA 518 (1075)
T KOG2082|consen 497 WVIVIGSFLSTCGAGLQSLTGA 518 (1075)
T ss_pred eeeehhHHHHHhHHHHhhhcCc
Confidence 5788999999999888887654
No 298
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=26.51 E-value=2.9e+02 Score=29.90 Aligned_cols=92 Identities=9% Similarity=-0.036 Sum_probs=57.5
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCC-----CCChHH----------HH-HHHHHHHHHHHHHHHHhh
Q 009308 31 NICFCKAALILLGLIFSHKLVDIAVVAVLITYLTDYPR-----NYNVVE----------AA-RLVNLQEGISASTVIFLT 94 (538)
Q Consensus 31 ~~~~~~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~-----g~s~~~----------a~-~i~~~~~~~~~~~~l~gG 94 (538)
...+||..+.++.++++.+++++...-+-+-++-++.. +-++++ .| +=+.+.+...-+.+..--
T Consensus 274 ~~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~ 353 (498)
T KOG0637|consen 274 LKVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVE 353 (498)
T ss_pred HhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHH
Confidence 46789999999999999999988444444444433210 111111 12 224456667778889999
Q ss_pred hhhhccCCchHHHHHHHHHHHHhHHHHHh
Q 009308 95 CIPDAFSGRLNVIFYSTISCILGLVLLFI 123 (538)
Q Consensus 95 ~laD~~lGr~~~i~~~~~~~~~G~~ll~~ 123 (538)
++.|++ |-|+..+.+...+.++..+..+
T Consensus 354 ~l~~~~-g~r~~y~~~~~~f~~~~~~~gl 381 (498)
T KOG0637|consen 354 KLSRKF-GTRKRYWGGVNAFGLATGLAGL 381 (498)
T ss_pred HHHHhc-CcceEEeehhHHHHHHHHHHhh
Confidence 999995 8555555555546666555443
No 299
>PF07522 DRMBL: DNA repair metallo-beta-lactamase; InterPro: IPR011084 The metallo-beta-lactamase fold contains five sequence motifs. The first four motifs are found in IPR001279 from INTERPRO and are common to all metallo-beta-lactamases. The fifth motif appears to be specific to function. This entry represents the fifth motif from metallo-beta-lactamases involved in DNA repair [].
Probab=26.06 E-value=36 Score=28.79 Aligned_cols=24 Identities=33% Similarity=0.481 Sum_probs=18.1
Q ss_pred cccccccccccHHHHHhhhcCcCcc
Q 009308 4 ITVPYLKLHSSFRAIIRKLRFISWI 28 (538)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~ 28 (538)
..||| |.||||+++..-.+..++.
T Consensus 77 ~~VPY-SeHSSf~EL~~Fv~~l~P~ 100 (110)
T PF07522_consen 77 YRVPY-SEHSSFSELKEFVSFLKPK 100 (110)
T ss_pred EEEec-ccCCCHHHHHHHHHhcCCc
Confidence 35777 8999999987766665554
No 300
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=25.16 E-value=3.4e+02 Score=23.09 Aligned_cols=31 Identities=6% Similarity=-0.044 Sum_probs=22.4
Q ss_pred hhCCcchhhHHHHHHHHHHHHHHHHHHHhhh
Q 009308 439 DQFPEPMHDCVSAITELVTGFASFVNIVSVY 469 (538)
Q Consensus 439 ~~aP~~~rg~~~gl~~l~~~iG~~l~~~l~~ 469 (538)
+.+.++.++..+++-..+-.++..+-+.+.+
T Consensus 33 ~~~a~s~k~~~~a~klssefIsGilVGa~iG 63 (116)
T COG5336 33 KSSAESIKGYAQAFKLSSEFISGILVGAGIG 63 (116)
T ss_pred cccchhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 3455678888888888887777766666666
No 301
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=24.15 E-value=2.2e+02 Score=31.07 Aligned_cols=53 Identities=6% Similarity=-0.086 Sum_probs=42.8
Q ss_pred HHHHHHHHHHhhhh----HHHHHhhCCcchhhHHHHHHHHHHHHHHHHHHHhhh-ccc
Q 009308 420 CLLGLMKGLARDGI----NKFLADQFPEPMHDCVSAITELVTGFASFVNIVSVY-FNK 472 (538)
Q Consensus 420 ~l~glgE~l~~p~~----~~~~~~~aP~~~rg~~~gl~~l~~~iG~~l~~~l~~-~~~ 472 (538)
++.-++|+.-+... ..|+.+..-.++..+..+++.+..+++..+++.+.. +.+
T Consensus 152 ~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 152 LFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 44566777655544 488889999999999999999999999999999887 443
No 302
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=21.43 E-value=1e+03 Score=25.39 Aligned_cols=57 Identities=16% Similarity=0.132 Sum_probs=41.8
Q ss_pred hhhHhHHHHHHHHHHHHHHhhhhHHHHHhhCCcchhhHHHHHHHHHHHHHHHHHHHh
Q 009308 411 SIFWLAPQFCLLGLMKGLARDGINKFLADQFPEPMHDCVSAITELVTGFASFVNIVS 467 (538)
Q Consensus 411 s~~~li~~~~l~glgE~l~~p~~~~~~~~~aP~~~rg~~~gl~~l~~~iG~~l~~~l 467 (538)
+-+|.+.-..++|+.-+-.....+-++-++.|++.|-.+-.+-.++...|-.+|..+
T Consensus 342 ~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~ 398 (406)
T KOG1479|consen 342 SDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLL 398 (406)
T ss_pred CchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 456666667788888888888888888888888888766666666666665555544
No 303
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=21.42 E-value=1.4e+02 Score=21.23 Aligned_cols=14 Identities=21% Similarity=0.183 Sum_probs=8.0
Q ss_pred cCCCccccccCCCc
Q 009308 511 RGGDTAEADVIPQA 524 (538)
Q Consensus 511 ~~~~~~~~~~~~~~ 524 (538)
+|++-+++.++|..
T Consensus 34 ~k~~~e~aa~lpl~ 47 (49)
T PF05545_consen 34 NKKRFEEAANLPLD 47 (49)
T ss_pred chhhHHHHHccCcc
Confidence 35555566666654
No 304
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=21.10 E-value=2.2e+02 Score=22.52 Aligned_cols=44 Identities=16% Similarity=0.142 Sum_probs=27.7
Q ss_pred hHHHHHHHHHHHHHh----hhhhHHHHHHHHHHHHHHHHHHhccccee
Q 009308 187 WLIPFFFSVIASVQL----SSWRVISTFTVSATGITLFIFRLGIRFFH 230 (538)
Q Consensus 187 ~y~~~niG~~i~~~~----~g~~~~F~i~~~~~~l~~~~~~~~~~~~~ 230 (538)
+...+.+++++|.+. -+.+..+++-++..++++++.+.-.+.|.
T Consensus 13 ~~~il~~~~iisfi~Gy~~q~~~~~~~~~~~g~~~~~lv~vP~Wp~y~ 60 (76)
T PF06645_consen 13 MQYILIISAIISFIVGYITQSFSYTFYIYGAGVVLTLLVVVPPWPFYN 60 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeCCcHhhc
Confidence 344555555555544 56777777777777777777665555553
No 305
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=20.93 E-value=1.9e+02 Score=30.54 Aligned_cols=115 Identities=15% Similarity=0.243 Sum_probs=70.0
Q ss_pred cchhhHhHHHHHHHHHHHHHHhhhhHHHHHhhCCcchhhHHHHHHHHHHHHHHHHHHHhhhcccccccccCCCcchhHHH
Q 009308 409 PMSIFWLAPQFCLLGLMKGLARDGINKFLADQFPEPMHDCVSAITELVTGFASFVNIVSVYFNKSLFADTLNSSRLDEYY 488 (538)
Q Consensus 409 ~~s~~~li~~~~l~glgE~l~~p~~~~~~~~~aP~~~rg~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~n~~~l~~~f 488 (538)
.+|.+.+....+.-=+|--+..++.....-+..|++.|..+-|+-+.....=..+.-+++-+.. .|.+ |
T Consensus 383 ~isv~ll~agVaaaR~GLW~fDlAVtqimQe~VpEseR~vv~gvqnsL~~~ldll~~ilvIi~p--np~~---------F 451 (503)
T KOG2601|consen 383 KISVYLLFAGVAAARLGLWMFDLAVTQIMQETVPESERCVVFGVQNSLNSALDLLKDILVIIVP--NPKD---------F 451 (503)
T ss_pred hHHHHHHHHHHHHHHhhHHhccHHHHHHHHHhcchhhhhhhHhHHHHHHHHHHHHHHhEEEEec--Cccc---------e
Confidence 4555555555555556667777888888888999999999999999888888877766665322 1111 4
Q ss_pred HHHHH--HHHHHHHHHHhhhcccccCCCccccccCCCcCCCccccceE
Q 009308 489 KMLTI--VSFINICYFWWISTFYTRGGDTAEADVIPQATGREEEEDFK 534 (538)
Q Consensus 489 ~~la~--l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (538)
+++.. .+.++..-.+...+.++-+.-..-.++.|.+.+.+++|.++
T Consensus 452 ~iltliS~~fVs~g~m~y~~~l~q~~~~~~hl~~~P~~ee~~~~~~~~ 499 (503)
T KOG2601|consen 452 GILTLISFSFVSLGHMFYTFYLAQIRSHNFHLEKIPLLEEKEEKEEFE 499 (503)
T ss_pred eeeeeehhhHhhhhhhhhhhhhhhccccccchhcCchhhHHHhcCchh
Confidence 43332 23333322222233343343333567778777777555554
No 306
>PF06610 DUF1144: Protein of unknown function (DUF1144); InterPro: IPR010574 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=20.20 E-value=2.5e+02 Score=24.91 Aligned_cols=84 Identities=12% Similarity=0.011 Sum_probs=47.6
Q ss_pred CcccccccccccccHHHHHhhhcCcCcccccchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccCCCCChHHHHHHHH
Q 009308 1 MIPITVPYLKLHSSFRAIIRKLRFISWISYNICFCKAALILLGLIFSHKLVDIAVVAVLITYLTDYPRNYNVVEAARLVN 80 (538)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~er~~~~g~~~~l~~yl~~~l~g~s~~~a~~i~~ 80 (538)
||+|.-||-...+-+-+.-.+.++.+| .-+++.-++|...+++.-.-+--.- |.+..+...-++
T Consensus 53 nI~iA~PYG~~RD~~lr~~~~~~~~~~---------------~~~l~D~lAyvsFQsPVYaaIL~~v-GA~~~qivtav~ 116 (143)
T PF06610_consen 53 NILIAWPYGIYRDWVLRQAARLSPSRW---------------SKNLADLLAYVSFQSPVYAAILWFV-GADGDQIVTAVS 116 (143)
T ss_pred hhhhccchhHHHHHHHHHhcccCchHH---------------HHHHHHHHHHHHhchHHHHHHHHHH-cCCHHHHHHHHH
Confidence 466777886655555443333333445 2445555666666665422221123 666666666666
Q ss_pred HHHHHHHHHHHHhhhhhhcc
Q 009308 81 LQEGISASTVIFLTCIPDAF 100 (538)
Q Consensus 81 ~~~~~~~~~~l~gG~laD~~ 100 (538)
.....+.++..+-|+.-|..
T Consensus 117 snavvs~~mG~~YG~FLd~c 136 (143)
T PF06610_consen 117 SNAVVSMVMGRPYGYFLDYC 136 (143)
T ss_pred HHHHHHHHhhhHHHHHHHHH
Confidence 66666666667777777764
Done!