Query 009309
Match_columns 538
No_of_seqs 214 out of 1556
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 23:35:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009309.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009309hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1k4i_A 3,4-dihydroxy-2-butanon 100.0 1.1E-77 3.6E-82 587.6 17.8 208 111-320 10-228 (233)
2 3mio_A DHBP synthase, 3,4-dihy 100.0 1.6E-77 5.4E-82 579.0 18.4 203 111-316 2-206 (206)
3 1tks_A 3,4-dihydroxy-2-butanon 100.0 2.5E-77 8.5E-82 576.5 18.7 200 111-313 3-203 (204)
4 1snn_A DHBP synthase, 3,4-dihy 100.0 2.2E-76 7.5E-81 577.8 11.6 200 113-314 1-222 (227)
5 1g57_A DHBP synthase, 3,4-dihy 100.0 8.1E-74 2.8E-78 557.5 18.5 204 112-318 12-215 (217)
6 2bz1_A GTP cyclohydrolase II; 100.0 5.2E-71 1.8E-75 531.8 12.7 194 318-513 2-195 (196)
7 4fd4_A Arylalkylamine N-acetyl 48.5 22 0.00074 31.1 5.1 38 453-490 153-190 (217)
8 4e0a_A BH1408 protein; structu 44.4 22 0.00077 29.1 4.3 40 453-492 115-156 (164)
9 2cyg_A Beta-1, 3-glucananse; e 43.9 14 0.00048 37.5 3.4 38 451-489 19-56 (312)
10 3qb8_A A654L protein; GNAT N-a 43.1 29 0.00099 29.7 4.9 58 403-489 113-170 (197)
11 4h89_A GCN5-related N-acetyltr 42.9 28 0.00095 30.1 4.8 57 403-488 94-153 (173)
12 1aq0_A 1,3-1,4-beta-glucanase; 42.5 15 0.00051 37.2 3.3 40 450-490 18-57 (306)
13 2iu4_A DHA-DHAQ, dihydroxyacet 42.0 22 0.00077 36.7 4.6 84 347-467 42-131 (336)
14 1y0n_A Hypothetical UPF0270 pr 41.8 20 0.00068 29.7 3.4 39 96-135 20-59 (78)
15 1ghs_A 1,3-beta-glucanase; hyd 41.6 15 0.00053 37.1 3.3 39 451-490 19-57 (306)
16 3em5_A Beta-1,3-glucanase; gly 41.6 15 0.00052 37.5 3.3 37 453-489 21-57 (316)
17 3n2l_A OPRT, oprtase, orotate 41.1 51 0.0017 32.2 6.8 76 236-316 142-220 (238)
18 3ct4_A PTS-dependent dihydroxy 40.3 25 0.00084 36.3 4.6 93 337-467 37-135 (332)
19 1oi2_A Hypothetical protein YC 40.2 25 0.00085 36.7 4.6 93 337-466 44-142 (366)
20 3te4_A GH12636P, dopamine N ac 39.7 27 0.00093 31.3 4.4 38 453-490 152-189 (215)
21 3ur8_A Glucan endo-1,3-beta-D- 36.7 21 0.00072 36.5 3.4 38 453-490 22-59 (323)
22 1js3_A DDC;, DOPA decarboxylas 33.4 58 0.002 33.4 6.2 50 255-304 221-270 (486)
23 2j8m_A Acetyltransferase PA486 32.8 63 0.0022 27.4 5.4 57 403-488 88-146 (172)
24 3k40_A Aromatic-L-amino-acid d 32.2 59 0.002 33.8 6.0 53 251-303 216-268 (475)
25 4e1o_A HDC, histidine decarbox 31.9 56 0.0019 33.9 5.8 51 253-303 225-275 (481)
26 1u6m_A Acetyltransferase, GNAT 31.7 47 0.0016 29.2 4.5 58 403-489 118-177 (199)
27 1y9w_A Acetyltransferase; stru 31.7 47 0.0016 27.1 4.3 37 453-489 90-126 (140)
28 4fd5_A Arylalkylamine N-acetyl 30.3 53 0.0018 29.5 4.7 38 453-490 157-194 (222)
29 1ghe_A Acetyltransferase; acyl 28.9 64 0.0022 26.6 4.7 56 403-488 96-153 (177)
30 3mjd_A Orotate phosphoribosylt 28.9 77 0.0026 30.7 5.8 66 249-314 145-213 (232)
31 1yr0_A AGR_C_1654P, phosphinot 28.0 77 0.0026 26.9 5.1 57 403-488 89-147 (175)
32 2jis_A Cysteine sulfinic acid 27.9 72 0.0025 33.2 5.8 49 256-304 246-294 (515)
33 2jlm_A Putative phosphinothric 27.1 88 0.003 27.1 5.4 57 403-488 96-154 (182)
34 3vp6_A Glutamate decarboxylase 27.1 73 0.0025 33.4 5.7 50 254-303 233-282 (511)
35 3nmy_A Xometc, cystathionine g 26.1 84 0.0029 31.9 5.8 38 267-304 150-187 (400)
36 2g3a_A Acetyltransferase; stru 25.7 32 0.0011 28.5 2.1 58 403-489 81-138 (152)
37 3p04_A Uncharacterized BCR; SE 25.4 41 0.0014 28.2 2.7 20 112-131 14-33 (87)
38 1tiq_A Protease synthase and s 25.3 76 0.0026 27.4 4.6 57 403-488 96-154 (180)
39 1oey_J P40-PHOX, neutrophil cy 25.0 38 0.0013 29.5 2.5 43 116-165 39-81 (107)
40 2okj_A Glutamate decarboxylase 24.7 73 0.0025 32.9 5.1 49 255-303 231-279 (504)
41 3op7_A Aminotransferase class 24.4 1E+02 0.0034 29.8 5.8 37 268-304 153-192 (375)
42 3ndn_A O-succinylhomoserine su 24.2 99 0.0034 31.5 5.9 37 268-304 165-201 (414)
43 2qma_A Diaminobutyrate-pyruvat 24.1 94 0.0032 32.1 5.8 50 254-303 243-292 (497)
44 3qhx_A Cystathionine gamma-syn 23.8 90 0.0031 31.2 5.5 37 268-304 150-186 (392)
45 1kmj_A Selenocysteine lyase; p 23.4 96 0.0033 30.0 5.4 36 269-304 164-199 (406)
46 3tqx_A 2-amino-3-ketobutyrate 23.4 85 0.0029 30.4 5.1 52 255-307 161-212 (399)
47 3jvn_A Acetyltransferase; alph 23.2 1.1E+02 0.0036 25.1 5.0 56 403-487 94-151 (166)
48 3kki_A CAI-1 autoinducer synth 22.3 81 0.0028 31.1 4.7 35 270-304 187-221 (409)
49 3ri6_A O-acetylhomoserine sulf 22.3 1.1E+02 0.0037 31.6 5.8 37 267-303 165-201 (430)
50 1vhs_A Similar to phosphinothr 22.3 74 0.0025 27.3 4.0 19 403-422 87-105 (175)
51 1cjw_A Protein (serotonin N-ac 22.1 1.3E+02 0.0045 24.2 5.3 56 403-488 95-151 (166)
52 2ae6_A Acetyltransferase, GNAT 21.8 85 0.0029 26.5 4.2 57 403-488 87-145 (166)
53 1t3i_A Probable cysteine desul 21.7 1.1E+02 0.0039 29.7 5.6 36 269-304 169-204 (420)
54 1z4e_A Transcriptional regulat 21.6 72 0.0025 26.2 3.6 54 403-485 91-146 (153)
55 4f0j_A Probable hydrolytic enz 21.4 4.2E+02 0.014 23.6 9.1 78 357-467 43-120 (315)
56 2fiw_A GCN5-related N-acetyltr 21.3 1.2E+02 0.004 25.0 4.9 35 453-488 109-143 (172)
57 2cb1_A O-acetyl homoserine sul 20.8 1.2E+02 0.0041 30.4 5.6 43 262-304 133-175 (412)
58 3f9t_A TDC, L-tyrosine decarbo 20.7 82 0.0028 30.2 4.3 38 269-307 171-208 (397)
59 3g8w_A Lactococcal prophage PS 20.7 1.1E+02 0.0037 25.3 4.6 36 453-488 108-145 (169)
60 1un8_A Dihydroxyacetone kinase 20.5 67 0.0023 35.3 3.9 93 337-467 40-138 (552)
61 1kol_A Formaldehyde dehydrogen 20.3 43 0.0015 33.8 2.2 16 197-217 36-51 (398)
62 3dxv_A Alpha-amino-epsilon-cap 20.1 1E+02 0.0034 30.9 4.9 41 267-308 199-243 (439)
No 1
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=100.00 E-value=1.1e-77 Score=587.57 Aligned_cols=208 Identities=38% Similarity=0.640 Sum_probs=201.3
Q ss_pred CCCccHHHHHHHHHCCCEEEEEeCCCCCcceeEEEEcCCCCHHHHHHHHHhCCceEEeecCHHHHHhcCCCCCCCCCCCC
Q 009309 111 EGFSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENE 190 (538)
Q Consensus 111 ~~~~~Ie~Ai~alr~G~~VvV~Dde~rEnEgdLV~aAe~~T~e~vaFm~r~~~Glicvam~~~~~~rL~Lp~m~~~~~n~ 190 (538)
+.|++|++||++||+|+||||+||++||||||||+||+++|||.||||++|++|+||+||++++|++|+||+|+.. |+
T Consensus 10 ~~~~~ie~Ai~alr~G~~Viv~DdedREnEgDLi~aAe~~T~e~i~fm~r~~~GliC~~lt~e~~~~L~Lp~Mv~~--n~ 87 (233)
T 1k4i_A 10 SNFDAIPDVIQAFKNGEFVVVLDDPSRENEADLIIAAESVTTEQMAFMVRHSSGLICAPLTPERTTALDLPQMVTH--NA 87 (233)
T ss_dssp --CCCHHHHHHHHHTTCCEEEECCTTTTCCEEEEEEGGGCCHHHHHHHHHHBCSCCEEEECHHHHHHTTCCBSCSS--CC
T ss_pred CchhHHHHHHHHHHCCCeEEEEeCCCCCcceeEEEEhhhCCHHHHHHHHHcCCCCEEEEcCHHHHhhCCCcccccc--cC
Confidence 5689999999999999999999999999999999999999999999999999999999999999999999999998 88
Q ss_pred CCCCCceEEeeeccC-CCccCCChhhHHHHHHHHcCCCCCCCCccCCCCCccceeccCCccccCchhHHHHHHHHHcCCC
Q 009309 191 DSSAPTFTITVDAKF-GTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVLRRAGHTEASVDLLVLAGLN 269 (538)
Q Consensus 191 ~~~~taFtVsVDa~~-gttTGISA~DRA~TIr~LAdp~s~p~Df~rPGHVfPL~a~~GGvl~R~GHTEAaVdLarlAGl~ 269 (538)
+.++|+|||||||++ |++|||||+|||+|||+|++|+++|+||+||||||||+|++||||+|+|||||||||||||||.
T Consensus 88 ~~~~TaFTVsVda~~~g~tTGISA~DRa~Tir~la~~~~~p~df~rPGHvfPL~A~~GGVl~R~GHTEAaVDLarLAGl~ 167 (233)
T 1k4i_A 88 DPRGTAYTVSVDAEHPSTTTGISAHDRALACRMLAAPDAQPSHFRRPGHVFPLRAVAGGVRARRGHTEAGVELCRLAGKR 167 (233)
T ss_dssp CSSCCCBBCCEEECSTTCSSSCSHHHHHHHHHHHHCTTCCGGGEEEEEEEEEEECCTTHHHHCCSHHHHHHHHHHHTTCC
T ss_pred CCCCCCeEEEEEcccCCCCCCcCHHHHHHHHHHHhCCCCCHHHcCCCCccceeeecCCCeeccCChHHHHHHHHHHcCCC
Confidence 899999999999998 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEecCCC----------CCCCCChHHHHHHHHHcCCcEEeehhHHHHHhhccchhh
Q 009309 270 PVSVLSAVVDPE----------DGSMSSLPSLRKLALEHSIPISSIIDLIRYRRKRETIVE 320 (538)
Q Consensus 270 Paavi~eiv~~~----------dG~ma~~~~l~~fA~~h~L~ivsi~DLi~yr~~~E~lVe 320 (538)
|++||||||+++ ||+|||++++++||++||||++||+|||+||+++|++|+
T Consensus 168 PagVicEi~~~~~~~~~~~~~~dG~mar~~~l~~fA~~h~L~iitI~dLi~yr~~~e~~v~ 228 (233)
T 1k4i_A 168 PVAVISEIVDDGQEVEGRAVRAAPGMLRGDECVAFARRWGLKVCTIEDMIAHVEKTEGKLE 228 (233)
T ss_dssp SBEEEEEBEECCEECTTSSCEESCEECCHHHHHHHHHHTTCEEEEHHHHHHHHHHHHCCC-
T ss_pred ceEEEEEeCCCcccccccccCCCCCcCCHHHHHHHHHHcCCcEEEHHHHHHHHHhcCCeec
Confidence 999999999863 699999999999999999999999999999999998875
No 2
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=100.00 E-value=1.6e-77 Score=578.98 Aligned_cols=203 Identities=44% Similarity=0.709 Sum_probs=188.7
Q ss_pred CCCccHHHHHHHHHCCCEEEEEeCCCCCcceeEEEEcCCCCHHHHHHHHHhCCceEEeecCHHHHHhcCCCCCCCCCCCC
Q 009309 111 EGFSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENE 190 (538)
Q Consensus 111 ~~~~~Ie~Ai~alr~G~~VvV~Dde~rEnEgdLV~aAe~~T~e~vaFm~r~~~Glicvam~~~~~~rL~Lp~m~~~~~n~ 190 (538)
+.|++|++||++||+|+||||+||++||||||||+|||.+|||.||||++|++|+||+||++++|++|+||+|++. |+
T Consensus 2 ~~~~~ie~Ai~~lr~G~~Viv~DdedREnEgDli~aAe~~T~e~i~fm~~~~~GliC~~lt~~~a~~L~Lp~mv~~--n~ 79 (206)
T 3mio_A 2 TRLDSVERAVADIAAGKAVIVIDDEDRENEGDLIFAAEKATPEMVAFMVRYTSGYLCVPLDGAICDRLGLLPMYAV--NQ 79 (206)
T ss_dssp CCCCCHHHHHHHHHTTCCEEEESSSCTTCCCEEEEEGGGCCHHHHHHHHHHBCSCCEEEECHHHHHHTTCSCCC------
T ss_pred CCchhHHHHHHHHHCCCeEEEEeCCCCccceeEEEEhHhCCHHHHHHHHHhCCCceEEECCHHHHhhCCCCccccc--CC
Confidence 4689999999999999999999999999999999999999999999999999999999999999999999999997 88
Q ss_pred CCCCCceEEeeeccCCCccCCChhhHHHHHHHHcCCCCCCCCccCCCCCccceeccCCccccCchhHHHHHHHHHcCCCC
Q 009309 191 DSSAPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVLRRAGHTEASVDLLVLAGLNP 270 (538)
Q Consensus 191 ~~~~taFtVsVDa~~gttTGISA~DRA~TIr~LAdp~s~p~Df~rPGHVfPL~a~~GGvl~R~GHTEAaVdLarlAGl~P 270 (538)
+.++|+|||||||++|++|||||+|||+|||+|++|+++|+||++|||||||++++||||+|+|||||||||||||||.|
T Consensus 80 ~~~~taftvsvda~~g~tTGISA~DRa~Ti~~ladp~~~p~Df~rPGHvfPL~A~~gGvl~R~GhTEaavdLarlAGl~P 159 (206)
T 3mio_A 80 DKHGTAYTVTVDARNGIGTGISASDRATTMRLLADPTSVADDFTRPGHVVPLRAKDGGVLRRPGHTEAAVDLARMAGLQP 159 (206)
T ss_dssp -------CCCEEESSSCSSSCSHHHHHHHHHHHHCTTCCGGGEEEEEEEEEEECCTTGGGTCCCHHHHHHHHHHHTTSCS
T ss_pred CCCCCCeEEEEecCCCCCCCcCHHHHHHHHHHHhCCCCCHHHhCCCCCceeEeeCCCCcccCCChHHHHHHHHHHcCCCc
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEe--cCCCCCCCCChHHHHHHHHHcCCcEEeehhHHHHHhhcc
Q 009309 271 VSVLSAV--VDPEDGSMSSLPSLRKLALEHSIPISSIIDLIRYRRKRE 316 (538)
Q Consensus 271 aavi~ei--v~~~dG~ma~~~~l~~fA~~h~L~ivsi~DLi~yr~~~E 316 (538)
++||||| +++ ||+|||++++.+||++||||+|||+|||+||+++|
T Consensus 160 a~vicEiv~~~~-dG~mar~~~l~~fA~~h~l~~iti~dli~yr~~~e 206 (206)
T 3mio_A 160 AGAICEIVSQKD-EGSMAHTDELRVFADEHGLALITIADLIEWRRKHE 206 (206)
T ss_dssp BEEEEEBBCSSS-TTSBCCHHHHHHHHHHHTCEEEEHHHHHHHHHHTC
T ss_pred eEEEEEEeeeCC-CCCcCCHHHHHHHHHHcCCcEEEHHHHHHHHHhcC
Confidence 9999999 997 89999999999999999999999999999998765
No 3
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=100.00 E-value=2.5e-77 Score=576.48 Aligned_cols=200 Identities=43% Similarity=0.687 Sum_probs=190.5
Q ss_pred CCCccHHHHHHHHHCCCEEEEEeCCCCCcceeEEEEcCCCCHHHHHHHHHhCCceEEeecCHHHHHhcCCCCCCCCCCCC
Q 009309 111 EGFSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENE 190 (538)
Q Consensus 111 ~~~~~Ie~Ai~alr~G~~VvV~Dde~rEnEgdLV~aAe~~T~e~vaFm~r~~~Glicvam~~~~~~rL~Lp~m~~~~~n~ 190 (538)
..|++|++||++||+|+||||+||++||||||||+|||++|||.||||++|++|+||+||++++|++|+||+|+.. |+
T Consensus 3 ~~~~~ie~Ai~~lr~G~~Viv~DdedREnEgDli~aAe~~T~e~i~fm~~~~~GliC~~lt~~~~~~L~Lp~mv~~--n~ 80 (204)
T 1tks_A 3 NIFTPIEEALEAYKNGEFLIVMDDEDRENEGDLIMAAELITQEKMAFLVRYSSGYVCVPLSEERANQLELPPMLAN--RS 80 (204)
T ss_dssp CCSCCHHHHHHHHHTTCCEEEESSSCTTCBCEEEEEGGGCCHHHHHHHHHTBCSCCEEEEEHHHHHHTTCCBSCC-----
T ss_pred CchhhHHHHHHHHHCCCeEEEEeCCCCCCCEEEEEEhhhCCHHHHHHHHHhCCCcEEEEcCHHHHhhCCCchhccc--cC
Confidence 3488999999999999999999999999999999999999999999999999999999999999999999999987 88
Q ss_pred CCCCCceEEeeeccCCCccCCChhhHHHHHHHHcCCCCCCCCccCCCCCccceeccCCccccCchhHHHHHHHHHcCCCC
Q 009309 191 DSSAPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVLRRAGHTEASVDLLVLAGLNP 270 (538)
Q Consensus 191 ~~~~taFtVsVDa~~gttTGISA~DRA~TIr~LAdp~s~p~Df~rPGHVfPL~a~~GGvl~R~GHTEAaVdLarlAGl~P 270 (538)
+.++|+|||||||++|++|||||+|||+||++|++|+++|+||+||||||||+|++||||+|+|||||||||||||||.|
T Consensus 81 ~~~~taFtVsVda~~g~tTGISA~DRa~Ti~~l~~~~~~p~df~rPGHvfPL~A~~gGvl~R~GHTEAavdLarLAGl~P 160 (204)
T 1tks_A 81 DRHGTAYTITCDFAEGTTTGISAHDRALTTRSLANPNSKPQDFIKPGHILPLRAVPGLLKKRRGHTEAAVQLSTLAGLQP 160 (204)
T ss_dssp ---CCCBBCCEEESTTCSSSCSHHHHHHHHHHHHCTTCCGGGEEEEEEEEEEEECTTGGGTCCCHHHHHHHHHHHTTSCS
T ss_pred CCCCCCeEEEEeccCCCCCCcCHHHHHHHHHHHhCCCCCHHHcCCCCCcceeeecCCCCccCCCcHHHHHHHHHHcCCCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEec-CCCCCCCCChHHHHHHHHHcCCcEEeehhHHHHHh
Q 009309 271 VSVLSAVV-DPEDGSMSSLPSLRKLALEHSIPISSIIDLIRYRR 313 (538)
Q Consensus 271 aavi~eiv-~~~dG~ma~~~~l~~fA~~h~L~ivsi~DLi~yr~ 313 (538)
++|||||+ ++ ||+|||++++++||++||||+|||+|||+||+
T Consensus 161 a~vicEi~~~~-dG~mar~~~l~~fA~~h~l~iiti~dLi~yr~ 203 (204)
T 1tks_A 161 AGVICELVRDE-DGLMMRLDDCIQFGKKHGIKIININQLVEYIS 203 (204)
T ss_dssp BEEEEEBBCTT-TCCBCBHHHHHHHHHHHTCCEEEHHHHHHHHC
T ss_pred eEEEEEEeECC-CCCcCCHHHHHHHHHHcCCcEEEHHHHHHHHh
Confidence 99999999 66 89999999999999999999999999999985
No 4
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=100.00 E-value=2.2e-76 Score=577.75 Aligned_cols=200 Identities=28% Similarity=0.480 Sum_probs=189.3
Q ss_pred CccHHHHHHHHHCCCEEEEEeCCCCCcceeEEEEcCCCCHHHHHHHHHhCCceEEeecCHHHHHhcCCCCCCCCCCC---
Q 009309 113 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAEN--- 189 (538)
Q Consensus 113 ~~~Ie~Ai~alr~G~~VvV~Dde~rEnEgdLV~aAe~~T~e~vaFm~r~~~Glicvam~~~~~~rL~Lp~m~~~~~n--- 189 (538)
|++|++||++||+|+||||+||++||||||||+||+++|||.||||++|++|+||+||++++|++|+||+|+....+
T Consensus 1 ~~~ie~Ai~alr~G~~Viv~DdedREnEgDli~aAe~~Tpe~i~fm~~~~~GliC~~l~~e~~~~L~Lp~Mv~~n~~~~~ 80 (227)
T 1snn_A 1 MNNVEKAIEALKKGEIILVYDSDEREGETDMVVASQFITPEHIRIMRKDAGGLICTALHPDICNKLGIPFMVDILEFASQ 80 (227)
T ss_dssp -CHHHHHHHHHHTTCCEEEECCTTTTCCEEEEEEGGGCCHHHHHHHHHHTEEEEEEEECHHHHHHHTCCCHHHHHHHHTT
T ss_pred CchHHHHHHHHHCCCeEEEEeCCCCCCceeEEEEhhhCCHHHHHHHHHcCCCcEEEEcCHHHHhhCCChhhhhhhccccc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999875221
Q ss_pred -------------CCCCCCceEEeeeccCCCccCCChhhHHHHHHHHcC------CCCCCCCccCCCCCccceeccCCcc
Q 009309 190 -------------EDSSAPTFTITVDAKFGTTTGVSASDRAKTVLALSS------PDSKPENFRRPGHVFPLKYRNGGVL 250 (538)
Q Consensus 190 -------------~~~~~taFtVsVDa~~gttTGISA~DRA~TIr~LAd------p~s~p~Df~rPGHVfPL~a~~GGvl 250 (538)
.+.++|+|||||||+ +++|||||+|||+|||+|++ |+++|+||++|||||||+|++|||+
T Consensus 81 ~~~~~~~l~~~~~~Y~~~TaFtvsVd~~-~~tTGISA~DRa~Tir~la~~~~~~~~~~~~~df~rPGHVfPL~A~~gGVl 159 (227)
T 1snn_A 81 KFKVLRELYPNDIPYDEKSSFSITINHR-KTFTGITDNDRAFTIKKLAELVKEGRFNDFGKEFRSPGSVTLLRAAEGLVK 159 (227)
T ss_dssp TCHHHHHTCCTTCTTSSSCCEEEEEEET-TCSSSCSHHHHHHHHHHHHHHHHTTCGGGHHHHEEEEEEEEEEECCTTGGG
T ss_pred cccccccccccccccCCCCCcEEEEEcC-CCCCCCCHHHHHHHHHHHHhhhcccCCCCCHHHcCCCCCceeEEeCCCCEe
Confidence 122899999999998 59999999999999999999 9999999999999999999999999
Q ss_pred ccCchhHHHHHHHHHcCCCCeEEEEEecCCCCCCCCChHHHHHHHHHcCCcEEeehhHHHHHhh
Q 009309 251 RRAGHTEASVDLLVLAGLNPVSVLSAVVDPEDGSMSSLPSLRKLALEHSIPISSIIDLIRYRRK 314 (538)
Q Consensus 251 ~R~GHTEAaVdLarlAGl~Paavi~eiv~~~dG~ma~~~~l~~fA~~h~L~ivsi~DLi~yr~~ 314 (538)
+|+|||||||||||||||.|++||||||++ ||+|||++++++||++||||+|||+|||+||++
T Consensus 160 ~R~GHTEaaVdLarlAGl~Pa~VicEi~~d-dG~mar~~~l~~fA~~h~l~~iti~dLi~yr~~ 222 (227)
T 1snn_A 160 NRQGHTEMTVALAELANLVPITTICEMMGD-DGNAMSKNETKRYAEKHNLIYLSGEEIINYYLD 222 (227)
T ss_dssp TCCSHHHHHHHHHHHTTSCSEEEEEEEBCT-TSSBCCHHHHHHHHHHHTCCEEEHHHHHHHC--
T ss_pred eCCCchHHHHHHHHHcCCCceEEEEEEeCC-CCCcCCHHHHHHHHHHcCCcEEEHHHHHHHHHH
Confidence 999999999999999999999999999998 899999999999999999999999999999875
No 5
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=100.00 E-value=8.1e-74 Score=557.50 Aligned_cols=204 Identities=41% Similarity=0.724 Sum_probs=194.3
Q ss_pred CCccHHHHHHHHHCCCEEEEEeCCCCCcceeEEEEcCCCCHHHHHHHHHhCCceEEeecCHHHHHhcCCCCCCCCCCCCC
Q 009309 112 GFSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENED 191 (538)
Q Consensus 112 ~~~~Ie~Ai~alr~G~~VvV~Dde~rEnEgdLV~aAe~~T~e~vaFm~r~~~Glicvam~~~~~~rL~Lp~m~~~~~n~~ 191 (538)
.+++|++||++||+|+||||+||++||||||||+|||.+|||.||||++|++|+||++|++++|++|+||+|+.. |++
T Consensus 12 ~~~~ie~Ai~~lr~G~~Viv~DdedREnEgdli~aAe~~T~e~i~fm~~~~~GliCl~lt~~ra~~L~Lp~mv~~--n~~ 89 (217)
T 1g57_A 12 PFERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVEN--NTS 89 (217)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEC----CCCEEEEEETTTCCHHHHHHHHHHBCSCCEEEECHHHHHHTTCCBSCSS--CCC
T ss_pred cHHHHHHHHHHHHCCCeEEEEeCCCCCcCEEEEEEhhhCCHHHHHHHHHhCCCceEEECCHHHHhhCCCcccccc--CCC
Confidence 368999999999999999999999999999999999999999999999999999999999999999999999987 888
Q ss_pred CCCCceEEeeeccCCCccCCChhhHHHHHHHHcCCCCCCCCccCCCCCccceeccCCccccCchhHHHHHHHHHcCCCCe
Q 009309 192 SSAPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVLRRAGHTEASVDLLVLAGLNPV 271 (538)
Q Consensus 192 ~~~taFtVsVDa~~gttTGISA~DRA~TIr~LAdp~s~p~Df~rPGHVfPL~a~~GGvl~R~GHTEAaVdLarlAGl~Pa 271 (538)
.++|+|||||||+.|++|||||.||++||++|++|+++|+||++|||||||++++||||+|+|||||||||||||||.||
T Consensus 90 ~~~taftVsvda~~g~tTGISa~DRa~Ti~~lad~~~~~~Df~~PGHvfPL~A~~gGvl~R~GhTEAavdLarLAGl~Pa 169 (217)
T 1g57_A 90 AYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPA 169 (217)
T ss_dssp TTCCCBBSCEEESSSCSSSCSHHHHHHHHHHHHSTTCCGGGEEEEEEEEEEECCTTGGGTCCSHHHHHHHHHHHTTSCSC
T ss_pred cCCCceEEeeccccCCCCCcCHHHHHHHHHHHhCCCCCHHHcCCCCCccceeecCCCcccCCCcHHHHHHHHHHcCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCCCCCCCCChHHHHHHHHHcCCcEEeehhHHHHHhhccch
Q 009309 272 SVLSAVVDPEDGSMSSLPSLRKLALEHSIPISSIIDLIRYRRKRETI 318 (538)
Q Consensus 272 avi~eiv~~~dG~ma~~~~l~~fA~~h~L~ivsi~DLi~yr~~~E~l 318 (538)
+|||||+++ ||+|++.+++.+||++||||+|+|+|||+||+++|+.
T Consensus 170 ~vicEi~~~-dG~mar~~~l~~fA~~h~l~~iti~dLi~yr~~~e~~ 215 (217)
T 1g57_A 170 GVLCELTND-DGTMARAPECIEFANKHNMALVTIEDLVAYRQAHERK 215 (217)
T ss_dssp EEEEEBBCT-TSSBCCHHHHHHHHHHTTCEEEEHHHHHHHHHHHC--
T ss_pred EEEEEEeCC-CCCccCHHHHHHHHHHcCCCEEEHHHHHHHHHhcccc
Confidence 999999997 8999999999999999999999999999999988764
No 6
>2bz1_A GTP cyclohydrolase II; riboflavin biosynthesis, catalytic zinc, magnesium; 1.54A {Escherichia coli} SCOP: c.144.1.1 PDB: 2bz0_A
Probab=100.00 E-value=5.2e-71 Score=531.77 Aligned_cols=194 Identities=47% Similarity=0.799 Sum_probs=169.6
Q ss_pred hhhccccccccCCceeEEEEEEEeCCCCceEEEEEEccCCCCCcceEEEcccCccccccCCCCCCChHHHHHHHHHHHHc
Q 009309 318 IVERTAISRLPTKWGLFQAYCYRSKLDGTDHVAVVKGNMGNGQDVLVRVHSECLTGDIFGSARCDCGNQLDLAMQIIEKA 397 (538)
Q Consensus 318 lVerv~~~~LpT~~G~F~~~~Yr~~~dg~EHlALv~Gdi~~~~~vLVRVHSeCltgDvfgS~~CDCg~qL~~Al~~I~~~ 397 (538)
.|+++++++|||.||+|++++|++..++.||+|||+|++..++||||||||+|+|||+|||.+|||+|||++||++|+++
T Consensus 2 ~V~~v~~~~lpT~~G~f~~~~y~~~~~~~eH~ALv~G~i~~~~~vLVRvHsec~tgDvfgs~rcdcg~qL~~Al~~I~~~ 81 (196)
T 2bz1_A 2 QLKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHTPVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAEE 81 (196)
T ss_dssp CEEEEEEEEEEETTEEEEEEEEEETTTCCEEEEEEESCCCSSSCEEEEEEECCHHHHTSCCSSCSHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEEecCCCeeEEEEEEEECCCCcEEEEEEeCCCCCCCccEEEEeccCChHHHhCCCCCCChHHHHHHHHHHHHh
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEEeCCCCCCcchHHHhHhhhhcccCCcchhhhhhcCCccccchhhHhHHHHHHHcCCCeeeeccCCcccccccc
Q 009309 398 GKGVVVYLRGHEGRGIGLGHKLRAYNLQDQGHDTVQANIELGLAVDAREYGIGAQQILRDLGVRTMRLMTNNPAKFIGLK 477 (538)
Q Consensus 398 G~GVlVYLr~qEGRGiGL~~Kl~ay~lQd~G~DTveAn~~lG~~~D~RdYgigA~QILrdLGV~kIrLLTNNP~K~~aL~ 477 (538)
|+||||||| ||||||||.+|++||+||++|+||++||..+|++.|.|+||+|| |||++|||++||||||||.|+.+|+
T Consensus 82 G~GVlvyLr-qegrgigL~~kl~ay~lqd~g~dt~~an~~lg~~~d~R~ygigA-qIL~dLGV~~irLLTnnp~K~~~L~ 159 (196)
T 2bz1_A 82 GRGILLYHR-QEGRNIGLLNKIRAYALQDQGYDTVEANHQLGFAADERDFTLCA-DMFKLLGVNEVRLLTNNPKKVEILT 159 (196)
T ss_dssp TSEEEEEEC-CHHHHTCHHHHHHHHHHHHTTCCHHHHHHHTTCCSCCCCTHHHH-HHHHHTTCCSEEEECSCHHHHHHHH
T ss_pred CCEEEEEEC-CCCcchhHHHHHHHHhhhccCCcccccccccCCCCccccHHHHH-HHHHHcCCCcEEccCCCCccccccc
Confidence 999999999 99999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred cCCcEEEEEeecCCCCChhHHHHHHHHhhhcCCccC
Q 009309 478 GYGLAVIGRVPILTPITEENKRYLETKRTKMGHIYG 513 (538)
Q Consensus 478 g~GIeV~ervpl~~~~~~~n~~YL~tK~~k~gH~~~ 513 (538)
||||+|++++|++.+++++|++||+||++||||+++
T Consensus 160 g~GleVve~v~~~~~~~~~n~~yl~tk~~~~gh~l~ 195 (196)
T 2bz1_A 160 EAGINIVERVPLIVGRNPNNEHYLDTKAEKMGHLLN 195 (196)
T ss_dssp HTTCCEEEEECCCC----------------------
T ss_pred cCCeEEEEEEccCCCCCccchhHHHhhHHhhCCCCC
Confidence 999999999999999999999999999999999984
No 7
>4fd4_A Arylalkylamine N-acetyltransferase like 5B; GNAT; 1.95A {Aedes aegypti}
Probab=48.53 E-value=22 Score=31.08 Aligned_cols=38 Identities=11% Similarity=0.153 Sum_probs=31.2
Q ss_pred HHHHHcCCCeeeeccCCcccccccccCCcEEEEEeecC
Q 009309 453 QILRDLGVRTMRLMTNNPAKFIGLKGYGLAVIGRVPIL 490 (538)
Q Consensus 453 QILrdLGV~kIrLLTNNP~K~~aL~g~GIeV~ervpl~ 490 (538)
+..+.+|++.+.+.+.|+.-..-.+.+|.+.++.++..
T Consensus 153 ~~a~~~g~~~i~~~~~n~~a~~~Y~k~GF~~~~~~~~~ 190 (217)
T 4fd4_A 153 DLSKKLGFKAISGDFTSVFSVKLAEKLGMECISQLALG 190 (217)
T ss_dssp HHHHHHTCSEEEEEECSHHHHHHHHHTTCEEEEEEEGG
T ss_pred HHHHHcCCCEEEEEeCCHHHHHHHHHCCCeEEEeEeHH
Confidence 45677899999988778776777889999999998865
No 8
>4e0a_A BH1408 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG, transferase; 1.80A {Bacillus halodurans} PDB: 4f6a_A*
Probab=44.40 E-value=22 Score=29.08 Aligned_cols=40 Identities=13% Similarity=-0.023 Sum_probs=29.4
Q ss_pred HHHHHcCCCeeeecc--CCcccccccccCCcEEEEEeecCCC
Q 009309 453 QILRDLGVRTMRLMT--NNPAKFIGLKGYGLAVIGRVPILTP 492 (538)
Q Consensus 453 QILrdLGV~kIrLLT--NNP~K~~aL~g~GIeV~ervpl~~~ 492 (538)
+.++..|+++|.|.+ +|+.-..-.+.+|.+.+++++....
T Consensus 115 ~~~~~~g~~~i~l~~~~~n~~a~~~y~k~GF~~~~~~~~~~~ 156 (164)
T 4e0a_A 115 SYGKAHQVDAIELDVYDFNDRAKAFYHSLGMRCQKQTMELPL 156 (164)
T ss_dssp HHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEEEEEEEC
T ss_pred HHHHHcCCCEEEEEEEcCCHHHHHHHHHcCCEEeceeccCCc
Confidence 556678999888875 5665566678889999888875543
No 9
>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3
Probab=43.87 E-value=14 Score=37.47 Aligned_cols=38 Identities=24% Similarity=0.373 Sum_probs=34.9
Q ss_pred HHHHHHHcCCCeeeeccCCcccccccccCCcEEEEEeec
Q 009309 451 AQQILRDLGVRTMRLMTNNPAKFIGLKGYGLAVIGRVPI 489 (538)
Q Consensus 451 A~QILrdLGV~kIrLLTNNP~K~~aL~g~GIeV~ervpl 489 (538)
+ ++|+.+|+++|||.+.+|.=+.++++.||+|.=-|+.
T Consensus 19 v-~llk~~~i~~vRlY~~d~~vl~A~~~tgi~v~lgv~n 56 (312)
T 2cyg_A 19 V-SLYKSNNIARMRLYDPNQAALQALRNSNIQVLLDVPR 56 (312)
T ss_dssp H-HHHHHTTCCEEEESSCCHHHHHHHTTSCCEEEEEECH
T ss_pred H-HHHHhcCCCEEEEcCCCHHHHHHHHhcCCEEEEeccc
Confidence 5 8999999999999999999999999999999877774
No 10
>3qb8_A A654L protein; GNAT N-acetyltransferase, acetyltransferase, COA, spermine, spermidine, transferase; HET: COA; 1.50A {Paramecium bursaria chlorella virus 1}
Probab=43.09 E-value=29 Score=29.74 Aligned_cols=58 Identities=19% Similarity=0.136 Sum_probs=42.8
Q ss_pred EEEeCCCCCCcchHHHhHhhhhcccCCcchhhhhhcCCccccchhhHhHHHHHHHcCCCeeeeccCCcccccccccCCcE
Q 009309 403 VYLRGHEGRGIGLGHKLRAYNLQDQGHDTVQANIELGLAVDAREYGIGAQQILRDLGVRTMRLMTNNPAKFIGLKGYGLA 482 (538)
Q Consensus 403 VYLr~qEGRGiGL~~Kl~ay~lQd~G~DTveAn~~lG~~~D~RdYgigA~QILrdLGV~kIrLLTNNP~K~~aL~g~GIe 482 (538)
+++. .+-||-|++.+|-.+ .. +..+..|++++.|-++|+.-..-.+..|.+
T Consensus 113 l~V~-p~~rg~Gig~~Ll~~---------------------------~~-~~a~~~g~~~i~l~~~n~~a~~~y~k~GF~ 163 (197)
T 3qb8_A 113 FAIG-SEVTGKGLATKLLKK---------------------------TI-EESSSHGFKYIYGDCTNIISQNMFEKHGFE 163 (197)
T ss_dssp EEEE-ESSCSSSHHHHHHHH---------------------------HH-HHHHHTTCCEEEEEECSHHHHHHHHHTTCE
T ss_pred EEEC-HHHcCCCHHHHHHHH---------------------------HH-HHHHHcCCCEEEEEcCCHHHHHHHHHCCCe
Confidence 4565 677777777765542 12 556678999999988777766777889999
Q ss_pred EEEEeec
Q 009309 483 VIGRVPI 489 (538)
Q Consensus 483 V~ervpl 489 (538)
.++.++.
T Consensus 164 ~~~~~~~ 170 (197)
T 3qb8_A 164 TVGSVKY 170 (197)
T ss_dssp EEEEEES
T ss_pred EEEEEEE
Confidence 9988874
No 11
>4h89_A GCN5-related N-acetyltransferase; N-acyltransferase superfamily, structural genomics, PSI-BIOL midwest center for structural genomics, MCSG; 1.37A {Kribbella flavida}
Probab=42.89 E-value=28 Score=30.12 Aligned_cols=57 Identities=25% Similarity=0.357 Sum_probs=39.2
Q ss_pred EEEeCCCCCCcchHHHhHhhhhcccCCcchhhhhhcCCccccchhhHhHHHHHHHcCCCeeeec---cCCcccccccccC
Q 009309 403 VYLRGHEGRGIGLGHKLRAYNLQDQGHDTVQANIELGLAVDAREYGIGAQQILRDLGVRTMRLM---TNNPAKFIGLKGY 479 (538)
Q Consensus 403 VYLr~qEGRGiGL~~Kl~ay~lQd~G~DTveAn~~lG~~~D~RdYgigA~QILrdLGV~kIrLL---TNNP~K~~aL~g~ 479 (538)
+|+. .+-||-|+..+|-... ++..+.+|++++.|. .+|+.-+.-.+.+
T Consensus 94 ~~V~-p~~rg~GiG~~Ll~~~----------------------------~~~a~~~g~~~~~l~~~~~~N~~A~~~y~k~ 144 (173)
T 4h89_A 94 FMVA-AAARGRGVGRALCQDM----------------------------IDWAGREGFRAIQFNAVVETNTVAVKLWQSL 144 (173)
T ss_dssp EEEC-GGGTTSSHHHHHHHHH----------------------------HHHHHHTTCSEEEEEEEETTCHHHHHHHHHT
T ss_pred eEEE-EeeccchHHHHHHHHH----------------------------HHHHHHCCCcEEEEeeecccCHHHHHHHHHC
Confidence 4665 7777777877655421 255678899888763 4566555566888
Q ss_pred CcEEEEEee
Q 009309 480 GLAVIGRVP 488 (538)
Q Consensus 480 GIeV~ervp 488 (538)
|.+.++++|
T Consensus 145 GF~~~G~~~ 153 (173)
T 4h89_A 145 GFRVIGTVP 153 (173)
T ss_dssp TCEEEEEEE
T ss_pred CCEEEEEEc
Confidence 999988876
No 12
>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A
Probab=42.48 E-value=15 Score=37.25 Aligned_cols=40 Identities=25% Similarity=0.434 Sum_probs=35.4
Q ss_pred hHHHHHHHcCCCeeeeccCCcccccccccCCcEEEEEeecC
Q 009309 450 GAQQILRDLGVRTMRLMTNNPAKFIGLKGYGLAVIGRVPIL 490 (538)
Q Consensus 450 gA~QILrdLGV~kIrLLTNNP~K~~aL~g~GIeV~ervpl~ 490 (538)
-+ |+|+..|+++|||.+-+|.-+.+|++.||+|.=-|+..
T Consensus 18 vv-~llk~~~i~~VRlY~~d~~vL~A~~~tgi~v~lgv~n~ 57 (306)
T 1aq0_A 18 VV-SMFKSNGIKSMRLYAPNQAALQAVGGTGINVVVGAPND 57 (306)
T ss_dssp HH-HHHHHHTCCEEEESSCCHHHHHHHTTSCCEEEEEECGG
T ss_pred HH-HHHHhcCCCEEEEcCCCHHHHHHHHhcCCEEEEecccc
Confidence 35 89999999999999988999999999999998777743
No 13
>2iu4_A DHA-DHAQ, dihydroxyacetone kinase; transferase, CO-activa kinase; HET: HIQ; 1.96A {Lactococcus lactis} PDB: 2iu6_A
Probab=42.03 E-value=22 Score=36.70 Aligned_cols=84 Identities=19% Similarity=0.359 Sum_probs=55.6
Q ss_pred eEEEEEEccCCCCCcceE---E--EcccCccccccCCCCCCChHHHHHHHHHHHHcCCEEEEEEeCCCCCCcchHHHhHh
Q 009309 347 DHVAVVKGNMGNGQDVLV---R--VHSECLTGDIFGSARCDCGNQLDLAMQIIEKAGKGVVVYLRGHEGRGIGLGHKLRA 421 (538)
Q Consensus 347 EHlALv~Gdi~~~~~vLV---R--VHSeCltgDvfgS~~CDCg~qL~~Al~~I~~~G~GVlVYLr~qEGRGiGL~~Kl~a 421 (538)
..++||.|-=+.-+|... = +=+.|..||||-|.. ..|.-+|++.+. .|.|||+...|-
T Consensus 42 ~KValISGGGSGHEPahaGfVG~GMLdAAv~G~VFaSPs---~~qi~~aikav~-~g~GvL~ivkNY------------- 104 (336)
T 2iu4_A 42 KTVPIISGGGSGHEPAHVGYVGSGMLAAAVTGPLFIPPK---SKNILKAIRQVN-SGKGVFVIIKNF------------- 104 (336)
T ss_dssp SSCCEEEEEEESSTTTTGGGBSTTSBSEEEEEEETSCCC---HHHHHHHHHHHC-SSSCEEEEEESC-------------
T ss_pred CcEEEEecCCccccccccccccCCccceeeecccCCCCC---HHHHHHHHHhhc-CCCCEEEEeCCc-------------
Confidence 346777663222233211 0 334577899999885 578999988875 567998877632
Q ss_pred hhhcccCCcchhhhhhcCCccccchhhHhHHHHHHHcCCC-eeeecc
Q 009309 422 YNLQDQGHDTVQANIELGLAVDAREYGIGAQQILRDLGVR-TMRLMT 467 (538)
Q Consensus 422 y~lQd~G~DTveAn~~lG~~~D~RdYgigA~QILrdLGV~-kIrLLT 467 (538)
.-|--+|++++ +.++.-||+ ++-+.+
T Consensus 105 -------------------tGDvlNF~mAa-E~a~~eGi~v~~VvV~ 131 (336)
T 2iu4_A 105 -------------------EADLKEFNEAI-KEARTEGIDVRYIVSH 131 (336)
T ss_dssp -------------------HHHHHHHHHHH-HHHHHTTCCEEEEEEC
T ss_pred -------------------HHHhhcHHHHH-HHHHhCCCcEEEEEec
Confidence 22667899999 999999987 344443
No 14
>1y0n_A Hypothetical UPF0270 protein PA3463; MCSG, midwest center for structural genomics, protein struct initiative, PSI, structural genomics; 2.00A {Pseudomonas aeruginosa} SCOP: d.291.1.1
Probab=41.83 E-value=20 Score=29.73 Aligned_cols=39 Identities=28% Similarity=0.428 Sum_probs=22.9
Q ss_pred cccccCCCCCCCCCCCCCc-cHHHHHHHHHCCCEEEEEeCC
Q 009309 96 DFFVSDAEGDPDCPTEGFS-SIEQALNTLRQGKFVIVVEDE 135 (538)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~-~Ie~Ai~alr~G~~VvV~Dde 135 (538)
.=|+.-+..|-.. ..++. .|++...+|++|+.||++|..
T Consensus 20 eefv~RegtDyg~-E~sL~~kv~qv~~qL~~GeavIvfse~ 59 (78)
T 1y0n_A 20 EDFVTREGTDNGD-ETPLDVRVERARHALRRGEAVILFDPE 59 (78)
T ss_dssp HHHHHCC--------CCHHHHHHHHHHHHHTTSEEEEECTT
T ss_pred HHHHhcccccccc-cccHHHHHHHHHHHHHcCCEEEEECCC
Confidence 3344444344333 33333 589999999999999999764
No 15
>1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3
Probab=41.60 E-value=15 Score=37.12 Aligned_cols=39 Identities=21% Similarity=0.329 Sum_probs=35.0
Q ss_pred HHHHHHHcCCCeeeeccCCcccccccccCCcEEEEEeecC
Q 009309 451 AQQILRDLGVRTMRLMTNNPAKFIGLKGYGLAVIGRVPIL 490 (538)
Q Consensus 451 A~QILrdLGV~kIrLLTNNP~K~~aL~g~GIeV~ervpl~ 490 (538)
+ |+|+..|+++|||.+.+|.-+.++++.||+|.--|+..
T Consensus 19 v-~llk~~~i~~vRlY~~d~~vL~A~~~tgi~v~lgv~n~ 57 (306)
T 1ghs_A 19 V-QLYRSKGINGMRIYFADGQALSALRNSGIGLILDIGND 57 (306)
T ss_dssp H-HHHHHHTCCEEEESSCCHHHHHHTTTSCCEEEEECCGG
T ss_pred H-HHHHhcCCCEEEEcCCCHHHHHHHHhcCCEEEEecccc
Confidence 5 89999999999999989989999999999998777753
No 16
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A*
Probab=41.59 E-value=15 Score=37.46 Aligned_cols=37 Identities=24% Similarity=0.405 Sum_probs=34.2
Q ss_pred HHHHHcCCCeeeeccCCcccccccccCCcEEEEEeec
Q 009309 453 QILRDLGVRTMRLMTNNPAKFIGLKGYGLAVIGRVPI 489 (538)
Q Consensus 453 QILrdLGV~kIrLLTNNP~K~~aL~g~GIeV~ervpl 489 (538)
|+||..||++|||..-+|.=+.+|++-||+|.=-||-
T Consensus 21 ~llks~gi~~VRlYdaD~~vL~Al~~sgi~v~vGV~n 57 (316)
T 3em5_A 21 ALYKKSNITRMRIYDPNQAVLEALRGSNIELILGVPN 57 (316)
T ss_dssp HHHHHTTCCEEECSSCCHHHHHHHTTCCCEEEEEECG
T ss_pred HHHHHcCCCEEEEecCCHHHHHHhhcCCceEEEeccc
Confidence 8999999999999998999999999999999877773
No 17
>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}
Probab=41.05 E-value=51 Score=32.19 Aligned_cols=76 Identities=17% Similarity=0.281 Sum_probs=51.0
Q ss_pred CCCCccceeccCCccccCchhHHHHHHHHHcCCCCeEEEEEecCCCCCCCCChHHHHHHHHHcCCcEE---eehhHHHHH
Q 009309 236 PGHVFPLKYRNGGVLRRAGHTEASVDLLVLAGLNPVSVLSAVVDPEDGSMSSLPSLRKLALEHSIPIS---SIIDLIRYR 312 (538)
Q Consensus 236 PGHVfPL~a~~GGvl~R~GHTEAaVdLarlAGl~Paavi~eiv~~~dG~ma~~~~l~~fA~~h~L~iv---si~DLi~yr 312 (538)
|| ..|...+ |+.-=|-..+++++++-+|...++++|-+=.. .|.-......+++.+++|+|+. +++||+.|.
T Consensus 142 ~G--~VliVDD--vitTG~T~~~a~~~l~~~Ga~vv~v~vlvdr~-egG~~~l~a~~~~~~~~Gv~v~SL~~~~~l~~~~ 216 (238)
T 3n2l_A 142 EG--RVMLVDD--VITAGTAIRESMELIQANKADLAGVLVAIDRQ-EKGKGELSAIQEVERDFGCAVISIVSLTDLITYL 216 (238)
T ss_dssp CS--EEEEECS--CCSSSHHHHHHHHHHHHTTCEEEEEEEEEECC-CBCSSSSBHHHHHHHHHCCEEEEEEEHHHHHHHH
T ss_pred CC--cEEEEee--eecccHHHHHHHHHHHHcCCEEEEEEEEEEcc-cCccchhhHHHHHHHHcCCCEEEEEEHHHHHHHH
Confidence 78 3444433 55444566789999999999988877765333 3333334567778788999965 566778887
Q ss_pred hhcc
Q 009309 313 RKRE 316 (538)
Q Consensus 313 ~~~E 316 (538)
.++.
T Consensus 217 ~~~~ 220 (238)
T 3n2l_A 217 EQQG 220 (238)
T ss_dssp HSSC
T ss_pred HHcC
Confidence 6543
No 18
>3ct4_A PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DHAK; dihydroxyacetone kinase subunit, tranferase; 2.50A {Lactococcus lactis subsp}
Probab=40.35 E-value=25 Score=36.35 Aligned_cols=93 Identities=17% Similarity=0.273 Sum_probs=60.7
Q ss_pred EEEEeCCCCceEEEEEEccCCCCCcceE-----EEcccCccccccCCCCCCChHHHHHHHHHHHHcCCEEEEEEeCCCCC
Q 009309 337 YCYRSKLDGTDHVAVVKGNMGNGQDVLV-----RVHSECLTGDIFGSARCDCGNQLDLAMQIIEKAGKGVVVYLRGHEGR 411 (538)
Q Consensus 337 ~~Yr~~~dg~EHlALv~Gdi~~~~~vLV-----RVHSeCltgDvfgS~~CDCg~qL~~Al~~I~~~G~GVlVYLr~qEGR 411 (538)
+.|+.... ...++||.|-=+.-+|... =+=+.|..||||-|.. ..|.-+|++.+. .|.|||+...|-
T Consensus 37 vv~r~~~~-~~KValISGGGSGHEPahaGfVG~GMLdAAv~G~VFaSPs---~~qi~~aikav~-~g~GvL~ivkNY--- 108 (332)
T 3ct4_A 37 IIQRKSPK-SGKVALVSGGGSGHEPAHAGFVGEGMLSAAVCGAIFTSPT---PDQIYEAIKSAD-EGAGVLLIIKNY--- 108 (332)
T ss_dssp EEEECSCC-CSCCEEEEEEEESSTTTTGGGBSBTSBSEEEEEEETCCCC---HHHHHHHHHHHC-CSSCEEEEEESC---
T ss_pred EEEeCCCC-CCcEEEEecCCccccccccccccCCccceeeecccCCCCC---HHHHHHHHHhhc-CCCCEEEEeCCc---
Confidence 34454433 3468888774222233211 0334577899999885 578999988775 567998877632
Q ss_pred CcchHHHhHhhhhcccCCcchhhhhhcCCccccchhhHhHHHHHHHcCCC-eeeecc
Q 009309 412 GIGLGHKLRAYNLQDQGHDTVQANIELGLAVDAREYGIGAQQILRDLGVR-TMRLMT 467 (538)
Q Consensus 412 GiGL~~Kl~ay~lQd~G~DTveAn~~lG~~~D~RdYgigA~QILrdLGV~-kIrLLT 467 (538)
.-|--+|++++ +.++.-||+ ++-+.+
T Consensus 109 -----------------------------tGDvlNF~mAa-E~a~~eGi~v~~VvV~ 135 (332)
T 3ct4_A 109 -----------------------------LGDVMNFEMAR-EMAEMEEIKVEQIIVD 135 (332)
T ss_dssp -----------------------------HHHHHHHHHHH-HHHHHTTCCEEEEEEC
T ss_pred -----------------------------HHHhhcHHHHH-HHHHhcCCcEEEEEeC
Confidence 22667899999 999999997 344443
No 19
>1oi2_A Hypothetical protein YCGT; kinase, dihydroxyacetone kinase; 1.75A {Escherichia coli} SCOP: c.119.1.2 PDB: 1oi3_A 1uod_A* 1uoe_A 3pnl_A* 3pnk_A* 3pno_A 3pnq_A 3pnm_A
Probab=40.16 E-value=25 Score=36.75 Aligned_cols=93 Identities=20% Similarity=0.359 Sum_probs=59.7
Q ss_pred EEEEeCCCCceEEEEEEccCCCCCcceE-----EEcccCccccccCCCCCCChHHHHHHHHHHHHcCCEEEEEEeCCCCC
Q 009309 337 YCYRSKLDGTDHVAVVKGNMGNGQDVLV-----RVHSECLTGDIFGSARCDCGNQLDLAMQIIEKAGKGVVVYLRGHEGR 411 (538)
Q Consensus 337 ~~Yr~~~dg~EHlALv~Gdi~~~~~vLV-----RVHSeCltgDvfgS~~CDCg~qL~~Al~~I~~~G~GVlVYLr~qEGR 411 (538)
+.|+........++|+.|-=..-+|... =+=+.+..||||-|.. ..|.-+|++.+. .|.|||+.+.|-.
T Consensus 44 vv~r~~~~~~~KValiSGGGSGHEPah~GfVG~GMLdaAv~G~VFaSPs---~~qi~~ai~av~-~g~GvL~ivkNYt-- 117 (366)
T 1oi2_A 44 YVTRADAPVAGKVALLSGGGSGHEPMHCGYIGQGMLSGACPGEIFTSPT---PDKIFECAMQVD-GGEGVLLIIKNYT-- 117 (366)
T ss_dssp EEEETTCSCTTSCEEEEEEEESSTTTTGGGBSBTSBSEEEEEEETSCCC---HHHHHHHHHHHC-CSSCEEEEEESSH--
T ss_pred EEEeCCCCCCCcEEEEecCCccccccccccccCCccceeeecccCCCCC---HHHHHHHHHhhc-CCCCEEEEeCCcH--
Confidence 3444433312457888764222233211 1334567899999885 578888888764 5679998876322
Q ss_pred CcchHHHhHhhhhcccCCcchhhhhhcCCccccchhhHhHHHHHHHcCCC-eeeec
Q 009309 412 GIGLGHKLRAYNLQDQGHDTVQANIELGLAVDAREYGIGAQQILRDLGVR-TMRLM 466 (538)
Q Consensus 412 GiGL~~Kl~ay~lQd~G~DTveAn~~lG~~~D~RdYgigA~QILrdLGV~-kIrLL 466 (538)
-|--+|++++ +.++.-||+ ++-+.
T Consensus 118 ------------------------------GDvlNF~mA~-E~a~~eGi~v~~Vvv 142 (366)
T 1oi2_A 118 ------------------------------GDILNFETAT-ELLHDSGVKVTTVVI 142 (366)
T ss_dssp ------------------------------HHHHHHHHHH-HHHHHTTCCEEEEEE
T ss_pred ------------------------------HHhhcHHHHH-HHHHhcCCcEEEEEe
Confidence 2667899999 999999997 34444
No 20
>3te4_A GH12636P, dopamine N acetyltransferase, isoform A; dopamine/acetyl COA, N-acetyltransferase domain; HET: ACO; 1.46A {Drosophila melanogaster} PDB: 3v8i_A*
Probab=39.69 E-value=27 Score=31.32 Aligned_cols=38 Identities=11% Similarity=0.229 Sum_probs=30.9
Q ss_pred HHHHHcCCCeeeeccCCcccccccccCCcEEEEEeecC
Q 009309 453 QILRDLGVRTMRLMTNNPAKFIGLKGYGLAVIGRVPIL 490 (538)
Q Consensus 453 QILrdLGV~kIrLLTNNP~K~~aL~g~GIeV~ervpl~ 490 (538)
+.++..|++.+.+.+.|+.-..-.+.+|.++++.++..
T Consensus 152 ~~~~~~g~~~~~~~~~~~~~~~~y~~~Gf~~~~~~~~~ 189 (215)
T 3te4_A 152 EYMRENGINVYHVLCSSHYSARVMEKLGFHEVFRMQFA 189 (215)
T ss_dssp HHHHHHTCCEEEEEESSHHHHHHHHHTTCEEEEEECGG
T ss_pred HHHHHcCCCEEEEEecCHHHHHHHHHCCCEEEEEEEhh
Confidence 56778899999888888766666788999999988754
No 21
>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A
Probab=36.68 E-value=21 Score=36.50 Aligned_cols=38 Identities=24% Similarity=0.391 Sum_probs=34.8
Q ss_pred HHHHHcCCCeeeeccCCcccccccccCCcEEEEEeecC
Q 009309 453 QILRDLGVRTMRLMTNNPAKFIGLKGYGLAVIGRVPIL 490 (538)
Q Consensus 453 QILrdLGV~kIrLLTNNP~K~~aL~g~GIeV~ervpl~ 490 (538)
|.|+..|+++|||.+-+|.=+.++++.||+|.=-||..
T Consensus 22 ~llks~gi~~VRlY~~D~~vL~Al~~sgi~V~lGV~n~ 59 (323)
T 3ur8_A 22 KLYNANNIKKMRIYYPHTNVFNALKGSNIEIILDVPNQ 59 (323)
T ss_dssp HHHHHTTCCEEEESSCCHHHHHHHTTCCCEEEEEECGG
T ss_pred HHHHhCCCCeEEecCCCHHHHHHHHhcCCeEEEecccc
Confidence 89999999999999988988999999999998888854
No 22
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=33.35 E-value=58 Score=33.40 Aligned_cols=50 Identities=18% Similarity=0.172 Sum_probs=39.2
Q ss_pred hhHHHHHHHHHcCCCCeEEEEEecCCCCCCCCChHHHHHHHHHcCCcEEe
Q 009309 255 HTEASVDLLVLAGLNPVSVLSAVVDPEDGSMSSLPSLRKLALEHSIPISS 304 (538)
Q Consensus 255 HTEAaVdLarlAGl~Paavi~eiv~~~dG~ma~~~~l~~fA~~h~L~ivs 304 (538)
.-|.+++=...+|..|.+|++...+-..|...+.+++.++|++||+.++.
T Consensus 221 ~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhv 270 (486)
T 1js3_A 221 ALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHV 270 (486)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEE
Confidence 45666665566788998887776643389999999999999999998753
No 23
>2j8m_A Acetyltransferase PA4866 from P. aeruginosa; GCN5 family, phosphinothricin, methionine sulfone, methionine sulfoximine; 1.44A {Pseudomonas aeruginosa} PDB: 2bl1_A 2j8n_A 2j8r_A* 1yvo_A
Probab=32.84 E-value=63 Score=27.36 Aligned_cols=57 Identities=30% Similarity=0.464 Sum_probs=35.9
Q ss_pred EEEeCCCCCCcchHHHhHhhhhcccCCcchhhhhhcCCccccchhhHhHHHHHHHcCCCeeeec--cCCcccccccccCC
Q 009309 403 VYLRGHEGRGIGLGHKLRAYNLQDQGHDTVQANIELGLAVDAREYGIGAQQILRDLGVRTMRLM--TNNPAKFIGLKGYG 480 (538)
Q Consensus 403 VYLr~qEGRGiGL~~Kl~ay~lQd~G~DTveAn~~lG~~~D~RdYgigA~QILrdLGV~kIrLL--TNNP~K~~aL~g~G 480 (538)
+|+. .+-||-|++.+|-... . +..+.+|+++|.|. ..|+.-..-.+..|
T Consensus 88 ~~V~-p~~rg~Gig~~ll~~~---------------------------~-~~a~~~g~~~i~l~v~~~N~~a~~~y~k~G 138 (172)
T 2j8m_A 88 VYVR-DDQRGKGLGVQLLQAL---------------------------I-ERARAQGLHVMVAAIESGNAASIGLHRRLG 138 (172)
T ss_dssp EEEC-TTCTTSSHHHHHHHHH---------------------------H-HHHHHTTCCEEEEEEETTCHHHHHHHHHTT
T ss_pred EEEC-hhhcCCCHHHHHHHHH---------------------------H-HHHHHCCccEEEEEEcCCCHHHHHHHHHCC
Confidence 6776 7778888877755431 1 44567788887764 34554444556777
Q ss_pred cEEEEEee
Q 009309 481 LAVIGRVP 488 (538)
Q Consensus 481 IeV~ervp 488 (538)
.+..+..+
T Consensus 139 F~~~g~~~ 146 (172)
T 2j8m_A 139 FEISGQMP 146 (172)
T ss_dssp CEEEEEEE
T ss_pred CEEEeecc
Confidence 77776554
No 24
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=32.21 E-value=59 Score=33.75 Aligned_cols=53 Identities=17% Similarity=0.206 Sum_probs=42.7
Q ss_pred ccCchhHHHHHHHHHcCCCCeEEEEEecCCCCCCCCChHHHHHHHHHcCCcEE
Q 009309 251 RRAGHTEASVDLLVLAGLNPVSVLSAVVDPEDGSMSSLPSLRKLALEHSIPIS 303 (538)
Q Consensus 251 ~R~GHTEAaVdLarlAGl~Paavi~eiv~~~dG~ma~~~~l~~fA~~h~L~iv 303 (538)
-...+-|++++=.+-.|..|..|++...+-..|...+.+++.++|++||+.++
T Consensus 216 ~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~lh 268 (475)
T 3k40_A 216 MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIH 268 (475)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEE
T ss_pred cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHHhCCeEE
Confidence 34556677777677788889888877765557999999999999999999864
No 25
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=31.87 E-value=56 Score=33.85 Aligned_cols=51 Identities=14% Similarity=0.147 Sum_probs=41.5
Q ss_pred CchhHHHHHHHHHcCCCCeEEEEEecCCCCCCCCChHHHHHHHHHcCCcEE
Q 009309 253 AGHTEASVDLLVLAGLNPVSVLSAVVDPEDGSMSSLPSLRKLALEHSIPIS 303 (538)
Q Consensus 253 ~GHTEAaVdLarlAGl~Paavi~eiv~~~dG~ma~~~~l~~fA~~h~L~iv 303 (538)
..+-|.+++=.+-.|..|..|++...+-..|...+.+++.++|++||+.++
T Consensus 225 ~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lh 275 (481)
T 4e1o_A 225 GEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLH 275 (481)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEE
Confidence 345677777667788889988888776557999999999999999998863
No 26
>1u6m_A Acetyltransferase, GNAT family; structural genomics, PSI, protein structure initiative; 2.40A {Enterococcus faecalis} SCOP: d.108.1.1
Probab=31.68 E-value=47 Score=29.17 Aligned_cols=58 Identities=21% Similarity=0.328 Sum_probs=40.1
Q ss_pred EEEeCCCCCCcchHHHhHhhhhcccCCcchhhhhhcCCccccchhhHhHHHHHHHcCCCeeeecc--CCcccccccccCC
Q 009309 403 VYLRGHEGRGIGLGHKLRAYNLQDQGHDTVQANIELGLAVDAREYGIGAQQILRDLGVRTMRLMT--NNPAKFIGLKGYG 480 (538)
Q Consensus 403 VYLr~qEGRGiGL~~Kl~ay~lQd~G~DTveAn~~lG~~~D~RdYgigA~QILrdLGV~kIrLLT--NNP~K~~aL~g~G 480 (538)
||+. .+-||.|+..+|-.+. . +..+..|+++|.|-+ .|+.=..--+.+|
T Consensus 118 l~V~-p~~rg~GiG~~Ll~~~---------------------------~-~~a~~~g~~~i~L~v~~~N~~A~~fY~k~G 168 (199)
T 1u6m_A 118 ISVD-ERFRGMGIGSKLLDAL---------------------------P-EVAKASGKQALGLNVDFDNPGARKLYASKG 168 (199)
T ss_dssp EEEC-GGGTTSSHHHHHHHTH---------------------------H-HHHHTTTCSEEEEEEETTCHHHHHHHHTTT
T ss_pred EEEC-HHHcCCCHHHHHHHHH---------------------------H-HHHHHcCCCEEEEEEecCCHHHHHHHHHCC
Confidence 5676 7888888888766431 2 556778999888765 4554444457788
Q ss_pred cEEEEEeec
Q 009309 481 LAVIGRVPI 489 (538)
Q Consensus 481 IeV~ervpl 489 (538)
.+.++++++
T Consensus 169 F~~~~~~~~ 177 (199)
T 1u6m_A 169 FKDVTTMTI 177 (199)
T ss_dssp CEEEEEEEE
T ss_pred CEEccEEEe
Confidence 888887664
No 27
>1y9w_A Acetyltransferase; structural genomics, Pro structure initiative, PSI, midwest center for structural GE MCSG; 1.90A {Bacillus cereus} SCOP: d.108.1.1
Probab=31.67 E-value=47 Score=27.11 Aligned_cols=37 Identities=22% Similarity=0.062 Sum_probs=27.1
Q ss_pred HHHHHcCCCeeeeccCCcccccccccCCcEEEEEeec
Q 009309 453 QILRDLGVRTMRLMTNNPAKFIGLKGYGLAVIGRVPI 489 (538)
Q Consensus 453 QILrdLGV~kIrLLTNNP~K~~aL~g~GIeV~ervpl 489 (538)
+.++..|++.+.|.++|+.-..-.+.+|.+..+..+.
T Consensus 90 ~~~~~~g~~~i~~~~~n~~a~~~y~~~Gf~~~~~~~~ 126 (140)
T 1y9w_A 90 GIAKEKGCRLILLDSFSFQAPEFYKKHGYREYGVVED 126 (140)
T ss_dssp HHHHHTTCCEEEEEEEGGGCHHHHHHTTCEEEEEESS
T ss_pred HHHHHcCCCEEEEEcCCHhHHHHHHHCCCEEEEEEcC
Confidence 4456678888888886665555567888888887763
No 28
>4fd5_A Arylalkylamine N-acetyltransferase 2; GNAT; 1.64A {Aedes aegypti} PDB: 4fd6_A
Probab=30.30 E-value=53 Score=29.48 Aligned_cols=38 Identities=11% Similarity=0.111 Sum_probs=29.3
Q ss_pred HHHHHcCCCeeeeccCCcccccccccCCcEEEEEeecC
Q 009309 453 QILRDLGVRTMRLMTNNPAKFIGLKGYGLAVIGRVPIL 490 (538)
Q Consensus 453 QILrdLGV~kIrLLTNNP~K~~aL~g~GIeV~ervpl~ 490 (538)
+.++..|++.+.+.+.|+.-..-.+.+|.+.++.++..
T Consensus 157 ~~~~~~g~~~~~~~~~~~~~~~~y~~~Gf~~~~~~~~~ 194 (222)
T 4fd5_A 157 ELALDRGFQVMKTDATGAFSQRVVSSLGFITKCEINYT 194 (222)
T ss_dssp HHHHHTTCCEEEEEECSHHHHHHHHHTTCEEEEEEEGG
T ss_pred HHHHHCCCCEEEEEeCCHHHHHHHHHCCCEEEEEEchh
Confidence 45677899888888877665556788999999888754
No 29
>1ghe_A Acetyltransferase; acyl coenzyme A complex; HET: ACO; 1.55A {Pseudomonas syringae PV} SCOP: d.108.1.1 PDB: 1j4j_A*
Probab=28.86 E-value=64 Score=26.60 Aligned_cols=56 Identities=20% Similarity=0.207 Sum_probs=33.9
Q ss_pred EEEeCCCCCCcchHHHhHhhhhcccCCcchhhhhhcCCccccchhhHhHHHHHHHcCCCeeeecc--CCcccccccccCC
Q 009309 403 VYLRGHEGRGIGLGHKLRAYNLQDQGHDTVQANIELGLAVDAREYGIGAQQILRDLGVRTMRLMT--NNPAKFIGLKGYG 480 (538)
Q Consensus 403 VYLr~qEGRGiGL~~Kl~ay~lQd~G~DTveAn~~lG~~~D~RdYgigA~QILrdLGV~kIrLLT--NNP~K~~aL~g~G 480 (538)
+|+. .+-||-|++.+|-.+.+ +.++..|++.|.|-+ +|+ -..-.+..|
T Consensus 96 ~~v~-p~~rg~Gig~~ll~~~~----------------------------~~~~~~g~~~i~l~~~~~n~-a~~~y~k~G 145 (177)
T 1ghe_A 96 LMVL-PSARGRGLGRQLMDEVE----------------------------QVAVKHKRGLLHLDTEAGSV-AEAFYSALA 145 (177)
T ss_dssp EEEC-GGGTTSSHHHHHHHHHH----------------------------HHHHHTTCCEEEEEEETTSH-HHHHHHHTT
T ss_pred EEEC-HHHcCCCHHHHHHHHHH----------------------------HHHHHcCCCEEEEEeccCCH-HHHHHHHcC
Confidence 5665 77788888777655321 334456777766654 344 444456667
Q ss_pred cEEEEEee
Q 009309 481 LAVIGRVP 488 (538)
Q Consensus 481 IeV~ervp 488 (538)
.+..+..+
T Consensus 146 f~~~~~~~ 153 (177)
T 1ghe_A 146 YTRVGELP 153 (177)
T ss_dssp CEEEEEEE
T ss_pred CEEccccc
Confidence 77666554
No 30
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=28.86 E-value=77 Score=30.67 Aligned_cols=66 Identities=15% Similarity=0.264 Sum_probs=43.1
Q ss_pred ccccCchhHHHHHHHHHcCCCCeEEEEEecCCCCCCCCChHHHHHHHHHcCCcEEe---ehhHHHHHhh
Q 009309 249 VLRRAGHTEASVDLLVLAGLNPVSVLSAVVDPEDGSMSSLPSLRKLALEHSIPISS---IIDLIRYRRK 314 (538)
Q Consensus 249 vl~R~GHTEAaVdLarlAGl~Paavi~eiv~~~dG~ma~~~~l~~fA~~h~L~ivs---i~DLi~yr~~ 314 (538)
|+.-=|-..+++++++-+|..+++++|-+=..+.|.--..+..+++-+++|+|+.+ ++||+.|..+
T Consensus 145 VitTG~Tl~~a~~~L~~~Ga~vv~v~vlvdr~e~g~~~~~~a~~~~~~~~gv~v~sL~~~~~l~~~~~~ 213 (232)
T 3mjd_A 145 VMTAGTAFYESYNKLKIINAKIAGVVLSIDRQEKAKDSDISATKKISQDFNIPVLAVTNFESIFEYVKE 213 (232)
T ss_dssp CCSSSHHHHHHHHHHHTTTCEEEEEEEEEECCBCCTTSSSCHHHHHHHHHCCCEEEEEEHHHHHHHHHH
T ss_pred eccccHHHHHHHHHHHHCCCEEEEEEEEEECCcCCccccchhHHHHHHHcCCcEEEEEeHHHHHHHHHh
Confidence 44443456789999999999888877765333212112245566777889999765 5677777654
No 31
>1yr0_A AGR_C_1654P, phosphinothricin acetyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.00A {Agrobacterium tumefaciens str} SCOP: d.108.1.1
Probab=27.98 E-value=77 Score=26.89 Aligned_cols=57 Identities=25% Similarity=0.402 Sum_probs=32.2
Q ss_pred EEEeCCCCCCcchHHHhHhhhhcccCCcchhhhhhcCCccccchhhHhHHHHHHHcCCCeeeecc--CCcccccccccCC
Q 009309 403 VYLRGHEGRGIGLGHKLRAYNLQDQGHDTVQANIELGLAVDAREYGIGAQQILRDLGVRTMRLMT--NNPAKFIGLKGYG 480 (538)
Q Consensus 403 VYLr~qEGRGiGL~~Kl~ay~lQd~G~DTveAn~~lG~~~D~RdYgigA~QILrdLGV~kIrLLT--NNP~K~~aL~g~G 480 (538)
+|+. .+-||-|++.+|-...+ +..+.+|+++|.|-+ .|+.-..-.+..|
T Consensus 89 ~~V~-p~~rg~Gig~~ll~~~~----------------------------~~a~~~g~~~i~l~v~~~N~~a~~~y~k~G 139 (175)
T 1yr0_A 89 VYVH-KDARGHGIGKRLMQALI----------------------------DHAGGNDVHVLIAAIEAENTASIRLHESLG 139 (175)
T ss_dssp EEEC-TTSTTSSHHHHHHHHHH----------------------------HHHHTTTCCEEEEEEETTCHHHHHHHHHTT
T ss_pred EEEC-ccccCCCHHHHHHHHHH----------------------------HHHHhCCccEEEEEecCCCHHHHHHHHHCC
Confidence 5675 78888888877654321 333455666666533 2443344445566
Q ss_pred cEEEEEee
Q 009309 481 LAVIGRVP 488 (538)
Q Consensus 481 IeV~ervp 488 (538)
.+.+++.+
T Consensus 140 F~~~g~~~ 147 (175)
T 1yr0_A 140 FRVVGRFS 147 (175)
T ss_dssp CEEEEEEE
T ss_pred CEEEEEcc
Confidence 66655443
No 32
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=27.90 E-value=72 Score=33.25 Aligned_cols=49 Identities=14% Similarity=0.204 Sum_probs=38.4
Q ss_pred hHHHHHHHHHcCCCCeEEEEEecCCCCCCCCChHHHHHHHHHcCCcEEe
Q 009309 256 TEASVDLLVLAGLNPVSVLSAVVDPEDGSMSSLPSLRKLALEHSIPISS 304 (538)
Q Consensus 256 TEAaVdLarlAGl~Paavi~eiv~~~dG~ma~~~~l~~fA~~h~L~ivs 304 (538)
-|.+++=.+-.|..|.+|++...+-..|...+.+++.++|++||+.++-
T Consensus 246 L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~v 294 (515)
T 2jis_A 246 LERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHV 294 (515)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEE
Confidence 4555554555688899998888744479999999999999999998763
No 33
>2jlm_A Putative phosphinothricin N-acetyltransferase; methionine sulfoximine; 2.35A {Acinetobacter baylyi}
Probab=27.14 E-value=88 Score=27.08 Aligned_cols=57 Identities=23% Similarity=0.262 Sum_probs=36.1
Q ss_pred EEEeCCCCCCcchHHHhHhhhhcccCCcchhhhhhcCCccccchhhHhHHHHHHHcCCCeeeec--cCCcccccccccCC
Q 009309 403 VYLRGHEGRGIGLGHKLRAYNLQDQGHDTVQANIELGLAVDAREYGIGAQQILRDLGVRTMRLM--TNNPAKFIGLKGYG 480 (538)
Q Consensus 403 VYLr~qEGRGiGL~~Kl~ay~lQd~G~DTveAn~~lG~~~D~RdYgigA~QILrdLGV~kIrLL--TNNP~K~~aL~g~G 480 (538)
+|+. ++-||-|++.++-... . +.++.+|+++|.|- ..|+.-..-.+.+|
T Consensus 96 ~~v~-p~~rg~Gig~~ll~~~---------------------------~-~~a~~~g~~~i~l~v~~~N~~a~~~yek~G 146 (182)
T 2jlm_A 96 VYIH-KDYRGLGLSKHLMNEL---------------------------I-KRAVESEVHVMVGCIDATNVASIQLHQKLG 146 (182)
T ss_dssp EEEC-TTSTTSSHHHHHHHHH---------------------------H-HHHHHTTCCEEEEEEETTCHHHHHHHHHTT
T ss_pred EEEC-hhhcCCCHHHHHHHHH---------------------------H-HHHHHCCceEEEEEEeCCCHHHHHHHHHCC
Confidence 6775 7778888877655431 1 33466788887764 34655555566777
Q ss_pred cEEEEEee
Q 009309 481 LAVIGRVP 488 (538)
Q Consensus 481 IeV~ervp 488 (538)
.+..+..+
T Consensus 147 F~~~g~~~ 154 (182)
T 2jlm_A 147 FIHSGTIQ 154 (182)
T ss_dssp CEEEEEEE
T ss_pred CcEEEEee
Confidence 77776544
No 34
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=27.10 E-value=73 Score=33.44 Aligned_cols=50 Identities=12% Similarity=0.117 Sum_probs=41.0
Q ss_pred chhHHHHHHHHHcCCCCeEEEEEecCCCCCCCCChHHHHHHHHHcCCcEE
Q 009309 254 GHTEASVDLLVLAGLNPVSVLSAVVDPEDGSMSSLPSLRKLALEHSIPIS 303 (538)
Q Consensus 254 GHTEAaVdLarlAGl~Paavi~eiv~~~dG~ma~~~~l~~fA~~h~L~iv 303 (538)
-.-|.+++=.+-.|..|..|++...+-..|.....+++.++|++||+.++
T Consensus 233 ~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lh 282 (511)
T 3vp6_A 233 ADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLH 282 (511)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEE
Confidence 34566776667788889998888776548999999999999999999875
No 35
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=26.15 E-value=84 Score=31.88 Aligned_cols=38 Identities=8% Similarity=0.028 Sum_probs=31.0
Q ss_pred CCCCeEEEEEecCCCCCCCCChHHHHHHHHHcCCcEEe
Q 009309 267 GLNPVSVLSAVVDPEDGSMSSLPSLRKLALEHSIPISS 304 (538)
Q Consensus 267 Gl~Paavi~eiv~~~dG~ma~~~~l~~fA~~h~L~ivs 304 (538)
.-.+.+|++|-.+...|...+.+++.++|++||+++|-
T Consensus 150 ~~~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~liv 187 (400)
T 3nmy_A 150 RADTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVV 187 (400)
T ss_dssp CTTEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred ccCCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEE
Confidence 33568888887654489999999999999999998873
No 36
>2g3a_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 1.90A {Agrobacterium tumefaciens str} SCOP: d.108.1.1
Probab=25.71 E-value=32 Score=28.47 Aligned_cols=58 Identities=26% Similarity=0.373 Sum_probs=38.5
Q ss_pred EEEeCCCCCCcchHHHhHhhhhcccCCcchhhhhhcCCccccchhhHhHHHHHHHcCCCeeeeccCCcccccccccCCcE
Q 009309 403 VYLRGHEGRGIGLGHKLRAYNLQDQGHDTVQANIELGLAVDAREYGIGAQQILRDLGVRTMRLMTNNPAKFIGLKGYGLA 482 (538)
Q Consensus 403 VYLr~qEGRGiGL~~Kl~ay~lQd~G~DTveAn~~lG~~~D~RdYgigA~QILrdLGV~kIrLLTNNP~K~~aL~g~GIe 482 (538)
+++. .+-||-|+..+|-... . +.++..|++++.|.+.|+.-..-.+.+|.+
T Consensus 81 ~~v~-p~~rg~Gig~~ll~~~---------------------------~-~~~~~~g~~~i~l~~~n~~a~~~y~k~GF~ 131 (152)
T 2g3a_A 81 LFVP-EAMRGQGIAPKLLAMA---------------------------E-EEARKRGCMGAYIDTMNPDALRTYERYGFT 131 (152)
T ss_dssp EECC-GGGCSSSHHHHHHHHH---------------------------H-HHHHHTTCCEEEEEESCHHHHHHHHHHTCE
T ss_pred EEEC-HHHcCCCHHHHHHHHH---------------------------H-HHHHHCCCCEEEEEecCccHHHHHHHCCCE
Confidence 5565 7777777777655431 1 345567888888887666666666777888
Q ss_pred EEEEeec
Q 009309 483 VIGRVPI 489 (538)
Q Consensus 483 V~ervpl 489 (538)
..+..+.
T Consensus 132 ~~~~~~~ 138 (152)
T 2g3a_A 132 KIGSLGP 138 (152)
T ss_dssp EEEEECC
T ss_pred EeeeccC
Confidence 7776653
No 37
>3p04_A Uncharacterized BCR; SEPF homolog, DUF552, PSI-biology, NESG, structural genomics structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=25.41 E-value=41 Score=28.22 Aligned_cols=20 Identities=20% Similarity=0.373 Sum_probs=18.4
Q ss_pred CCccHHHHHHHHHCCCEEEE
Q 009309 112 GFSSIEQALNTLRQGKFVIV 131 (538)
Q Consensus 112 ~~~~Ie~Ai~alr~G~~VvV 131 (538)
.|+..+++.++||+|++|||
T Consensus 14 sy~Da~~I~d~Lr~~~~Vvv 33 (87)
T 3p04_A 14 SFEDAQVIGGAFRDGDAVVF 33 (87)
T ss_dssp SGGGHHHHHHHHHTTCCEEE
T ss_pred cHHHHHHHHHHHHCCCEEEE
Confidence 67889999999999999996
No 38
>1tiq_A Protease synthase and sporulation negative regulatory protein PAI 1; alpha-beta protein, structural genomics, PSI; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.108.1.1
Probab=25.27 E-value=76 Score=27.38 Aligned_cols=57 Identities=19% Similarity=0.264 Sum_probs=38.6
Q ss_pred EEEeCCCCCCcchHHHhHhhhhcccCCcchhhhhhcCCccccchhhHhHHHHHHHcCCCeeeecc--CCcccccccccCC
Q 009309 403 VYLRGHEGRGIGLGHKLRAYNLQDQGHDTVQANIELGLAVDAREYGIGAQQILRDLGVRTMRLMT--NNPAKFIGLKGYG 480 (538)
Q Consensus 403 VYLr~qEGRGiGL~~Kl~ay~lQd~G~DTveAn~~lG~~~D~RdYgigA~QILrdLGV~kIrLLT--NNP~K~~aL~g~G 480 (538)
+|+. ++-||-|++.+|-.+. . +..+..|+++|.|-+ .|+.=+.--+.+|
T Consensus 96 l~V~-p~~rg~GiG~~Ll~~~---------------------------~-~~a~~~g~~~i~L~v~~~N~~A~~fY~k~G 146 (180)
T 1tiq_A 96 IYIK-NSFQKHGLGKHLLNKA---------------------------I-EIALERNKKNIWLGVWEKNENAIAFYKKMG 146 (180)
T ss_dssp EEEC-GGGCSSSHHHHHHHHH---------------------------H-HHHHHTTCSEEEEEEETTCHHHHHHHHHTT
T ss_pred EEEC-HHHhCCCHHHHHHHHH---------------------------H-HHHHHCCCCEEEEEehhcCHHHHHHHHHcC
Confidence 6776 7888888877765431 2 455778899888755 4554444457788
Q ss_pred cEEEEEee
Q 009309 481 LAVIGRVP 488 (538)
Q Consensus 481 IeV~ervp 488 (538)
.++++..+
T Consensus 147 F~~~g~~~ 154 (180)
T 1tiq_A 147 FVQTGAHS 154 (180)
T ss_dssp CEEEEEEE
T ss_pred CEEcCcEE
Confidence 88887665
No 39
>1oey_J P40-PHOX, neutrophil cytosol factor 4; immune system, PB1 heterodimer/complex, NADPH oxidase, PB1 D heterodimerization; 2.0A {Homo sapiens} SCOP: d.15.2.2
Probab=25.01 E-value=38 Score=29.53 Aligned_cols=43 Identities=30% Similarity=0.525 Sum_probs=32.5
Q ss_pred HHHHHHHHHCCCEEEEEeCCCCCcceeEEEEcCCCCHHHHHHHHHhCCce
Q 009309 116 IEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGI 165 (538)
Q Consensus 116 Ie~Ai~alr~G~~VvV~Dde~rEnEgdLV~aAe~~T~e~vaFm~r~~~Gl 165 (538)
+.-....+++-+.++=+=| .||||| ...+.++|.+|++.++|+
T Consensus 39 l~lmr~~F~~~DIaLNYrD----~eGDLI---rilddeDv~lmi~~sr~~ 81 (107)
T 1oey_J 39 LELTRREFQREDIALNYRD----AEGDLV---RLLSDEDVALMVRQARGL 81 (107)
T ss_dssp HHHHHHHHCCSSEEEEEEC----TTSCEE---ECCSHHHHHHHHHHCCCC
T ss_pred HHHHHHHhcccceeeeeec----CCCCEE---EEcchHHHHHHHHHhhcC
Confidence 3445566667777776644 568998 468899999999999884
No 40
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=24.74 E-value=73 Score=32.95 Aligned_cols=49 Identities=12% Similarity=0.116 Sum_probs=37.9
Q ss_pred hhHHHHHHHHHcCCCCeEEEEEecCCCCCCCCChHHHHHHHHHcCCcEE
Q 009309 255 HTEASVDLLVLAGLNPVSVLSAVVDPEDGSMSSLPSLRKLALEHSIPIS 303 (538)
Q Consensus 255 HTEAaVdLarlAGl~Paavi~eiv~~~dG~ma~~~~l~~fA~~h~L~iv 303 (538)
.-|.+++=.+..|..|.+|++...+-..|.....+++.++|++||+.++
T Consensus 231 ~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lh 279 (504)
T 2okj_A 231 DFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLH 279 (504)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEE
Confidence 3455665555668889988887664447999999999999999998764
No 41
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=24.40 E-value=1e+02 Score=29.84 Aligned_cols=37 Identities=19% Similarity=0.128 Sum_probs=28.0
Q ss_pred CCCeEEEEEecCCCCCCCCC---hHHHHHHHHHcCCcEEe
Q 009309 268 LNPVSVLSAVVDPEDGSMSS---LPSLRKLALEHSIPISS 304 (538)
Q Consensus 268 l~Paavi~eiv~~~dG~ma~---~~~l~~fA~~h~L~ivs 304 (538)
-.+.+|+.+-.+...|..++ +.++.++|++||+.+|.
T Consensus 153 ~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~ 192 (375)
T 3op7_A 153 PTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILS 192 (375)
T ss_dssp TTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred cCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 35667766644333899999 88889999999998874
No 42
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=24.19 E-value=99 Score=31.52 Aligned_cols=37 Identities=11% Similarity=0.099 Sum_probs=29.9
Q ss_pred CCCeEEEEEecCCCCCCCCChHHHHHHHHHcCCcEEe
Q 009309 268 LNPVSVLSAVVDPEDGSMSSLPSLRKLALEHSIPISS 304 (538)
Q Consensus 268 l~Paavi~eiv~~~dG~ma~~~~l~~fA~~h~L~ivs 304 (538)
-.+.+|++|-.+...|.+.+.+++.++|++||+++|.
T Consensus 165 ~~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~liv 201 (414)
T 3ndn_A 165 VPTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVL 201 (414)
T ss_dssp SCCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred CCCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEE
Confidence 3567777776644489999999999999999998764
No 43
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=24.05 E-value=94 Score=32.05 Aligned_cols=50 Identities=14% Similarity=0.324 Sum_probs=37.9
Q ss_pred chhHHHHHHHHHcCCCCeEEEEEecCCCCCCCCChHHHHHHHHHcCCcEE
Q 009309 254 GHTEASVDLLVLAGLNPVSVLSAVVDPEDGSMSSLPSLRKLALEHSIPIS 303 (538)
Q Consensus 254 GHTEAaVdLarlAGl~Paavi~eiv~~~dG~ma~~~~l~~fA~~h~L~iv 303 (538)
-.-|.+++=.+-+|..|.+|++...+-..|.....+++.++|++||+.++
T Consensus 243 ~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~ 292 (497)
T 2qma_A 243 TKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMH 292 (497)
T ss_dssp GGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEE
Confidence 34566666455567778888776654447999999999999999998764
No 44
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=23.82 E-value=90 Score=31.22 Aligned_cols=37 Identities=8% Similarity=0.039 Sum_probs=29.9
Q ss_pred CCCeEEEEEecCCCCCCCCChHHHHHHHHHcCCcEEe
Q 009309 268 LNPVSVLSAVVDPEDGSMSSLPSLRKLALEHSIPISS 304 (538)
Q Consensus 268 l~Paavi~eiv~~~dG~ma~~~~l~~fA~~h~L~ivs 304 (538)
-.+.+|+.+-.+...|.+.+.+++.++|++||+.+|.
T Consensus 150 ~~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~ 186 (392)
T 3qhx_A 150 PTTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLV 186 (392)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEE
T ss_pred CCCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEE
Confidence 3567777776654489999999999999999988764
No 45
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=23.37 E-value=96 Score=29.99 Aligned_cols=36 Identities=17% Similarity=0.140 Sum_probs=27.9
Q ss_pred CCeEEEEEecCCCCCCCCChHHHHHHHHHcCCcEEe
Q 009309 269 NPVSVLSAVVDPEDGSMSSLPSLRKLALEHSIPISS 304 (538)
Q Consensus 269 ~Paavi~eiv~~~dG~ma~~~~l~~fA~~h~L~ivs 304 (538)
.+.+|+.+-.+...|...+.+++.++|++||+.+|.
T Consensus 164 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~ 199 (406)
T 1kmj_A 164 KTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLV 199 (406)
T ss_dssp TEEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEE
T ss_pred CCeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEE
Confidence 566666655543379999999999999999988763
No 46
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=23.35 E-value=85 Score=30.43 Aligned_cols=52 Identities=21% Similarity=0.090 Sum_probs=35.0
Q ss_pred hhHHHHHHHHHcCCCCeEEEEEecCCCCCCCCChHHHHHHHHHcCCcEEeehh
Q 009309 255 HTEASVDLLVLAGLNPVSVLSAVVDPEDGSMSSLPSLRKLALEHSIPISSIID 307 (538)
Q Consensus 255 HTEAaVdLarlAGl~Paavi~eiv~~~dG~ma~~~~l~~fA~~h~L~ivsi~D 307 (538)
.-|.+++-..-.|..+.+|+.+-.+...|..++.+++.++|++||+.+|. +|
T Consensus 161 ~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~-De 212 (399)
T 3tqx_A 161 DLEAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMV-DD 212 (399)
T ss_dssp HHHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEE-EC
T ss_pred HHHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEE-EC
Confidence 34444443332334677777665533389999999999999999998874 44
No 47
>3jvn_A Acetyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.61A {Vibrio fischeri}
Probab=23.20 E-value=1.1e+02 Score=25.15 Aligned_cols=56 Identities=23% Similarity=0.220 Sum_probs=26.8
Q ss_pred EEEeCCCCCCcchHHHhHhhhhcccCCcchhhhhhcCCccccchhhHhHHHHHHHcCCCeeeecc--CCcccccccccCC
Q 009309 403 VYLRGHEGRGIGLGHKLRAYNLQDQGHDTVQANIELGLAVDAREYGIGAQQILRDLGVRTMRLMT--NNPAKFIGLKGYG 480 (538)
Q Consensus 403 VYLr~qEGRGiGL~~Kl~ay~lQd~G~DTveAn~~lG~~~D~RdYgigA~QILrdLGV~kIrLLT--NNP~K~~aL~g~G 480 (538)
+|+. .+-||-|++.+|-.+ .. +.++..|+++|.|.+ .|+.-..-.+..|
T Consensus 94 l~V~-p~~rg~Gig~~ll~~---------------------------~~-~~a~~~g~~~i~l~v~~~n~~a~~~y~k~G 144 (166)
T 3jvn_A 94 LYIE-KEYRREGVAEQLMMR---------------------------IE-QELKDYGVKEIFVEVWDFNKGALEFYNKQG 144 (166)
T ss_dssp EEEC-TTTCSSSHHHHHHHH---------------------------HH-HHHHTTTCSEEEECCC--CCBC--------
T ss_pred EEEC-HHHhccCHHHHHHHH---------------------------HH-HHHHHcCCCEEEEEEecCCHHHHHHHHHcC
Confidence 4565 777787787765432 12 556778999999877 3555566677888
Q ss_pred cEEEEEe
Q 009309 481 LAVIGRV 487 (538)
Q Consensus 481 IeV~erv 487 (538)
.+.++..
T Consensus 145 F~~~~~~ 151 (166)
T 3jvn_A 145 LNEHIHY 151 (166)
T ss_dssp -------
T ss_pred CeEHHHH
Confidence 8877644
No 48
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=22.33 E-value=81 Score=31.14 Aligned_cols=35 Identities=14% Similarity=0.247 Sum_probs=28.8
Q ss_pred CeEEEEEecCCCCCCCCChHHHHHHHHHcCCcEEe
Q 009309 270 PVSVLSAVVDPEDGSMSSLPSLRKLALEHSIPISS 304 (538)
Q Consensus 270 Paavi~eiv~~~dG~ma~~~~l~~fA~~h~L~ivs 304 (538)
+++|+.+-+....|.....+++.++|++||+.+|.
T Consensus 187 ~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~ 221 (409)
T 3kki_A 187 PGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLV 221 (409)
T ss_dssp SCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEE
T ss_pred CeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEE
Confidence 57777776654489999999999999999998874
No 49
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=22.32 E-value=1.1e+02 Score=31.60 Aligned_cols=37 Identities=14% Similarity=0.217 Sum_probs=29.8
Q ss_pred CCCCeEEEEEecCCCCCCCCChHHHHHHHHHcCCcEE
Q 009309 267 GLNPVSVLSAVVDPEDGSMSSLPSLRKLALEHSIPIS 303 (538)
Q Consensus 267 Gl~Paavi~eiv~~~dG~ma~~~~l~~fA~~h~L~iv 303 (538)
.-.+.+|++|-.+...|.+.+.+++.++|++||+++|
T Consensus 165 ~~~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~li 201 (430)
T 3ri6_A 165 DETTKLLFLETISNPQLQVADLEALSKVVHAKGIPLV 201 (430)
T ss_dssp CTTEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEE
T ss_pred CCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEE
Confidence 3356777777554338999999999999999999887
No 50
>1vhs_A Similar to phosphinothricin acetyltransferase; structural genomics, unknown function; 1.80A {Bacillus subtilis} SCOP: d.108.1.1
Probab=22.25 E-value=74 Score=27.29 Aligned_cols=19 Identities=32% Similarity=0.573 Sum_probs=12.8
Q ss_pred EEEeCCCCCCcchHHHhHhh
Q 009309 403 VYLRGHEGRGIGLGHKLRAY 422 (538)
Q Consensus 403 VYLr~qEGRGiGL~~Kl~ay 422 (538)
+|+. ++-||-|++.+|-..
T Consensus 87 l~V~-p~~rg~GiG~~ll~~ 105 (175)
T 1vhs_A 87 IYID-EACRGKGVGSYLLQE 105 (175)
T ss_dssp EEEC-GGGCSSSHHHHHHHH
T ss_pred EEEC-hhhcCCCHHHHHHHH
Confidence 5675 777777777765543
No 51
>1cjw_A Protein (serotonin N-acetyltransferase); HET: COT; 1.80A {Ovis aries} SCOP: d.108.1.1 PDB: 1b6b_A
Probab=22.12 E-value=1.3e+02 Score=24.24 Aligned_cols=56 Identities=20% Similarity=0.137 Sum_probs=37.5
Q ss_pred EEEeCCCCCCcchHHHhHhhhhcccCCcchhhhhhcCCccccchhhHhHHHHHHH-cCCCeeeeccCCcccccccccCCc
Q 009309 403 VYLRGHEGRGIGLGHKLRAYNLQDQGHDTVQANIELGLAVDAREYGIGAQQILRD-LGVRTMRLMTNNPAKFIGLKGYGL 481 (538)
Q Consensus 403 VYLr~qEGRGiGL~~Kl~ay~lQd~G~DTveAn~~lG~~~D~RdYgigA~QILrd-LGV~kIrLLTNNP~K~~aL~g~GI 481 (538)
+++. ++-||-|+..+|-.+. . +.++. .|++.+.|-+ |+.-..-.+.+|.
T Consensus 95 ~~v~-p~~rg~Gig~~ll~~~---------------------------~-~~~~~~~g~~~i~l~~-n~~a~~~y~k~GF 144 (166)
T 1cjw_A 95 LAVH-RSFRQQGKGSVLLWRY---------------------------L-HHVGAQPAVRRAVLMC-EDALVPFYQRFGF 144 (166)
T ss_dssp EEEC-TTSTTSSHHHHHHHHH---------------------------H-HHHHTSTTCCEEEEEE-CGGGHHHHHTTTE
T ss_pred EEEC-HhhccCChHHHHHHHH---------------------------H-HHHHHhcCcceEEEec-CchHHHHHHHcCC
Confidence 4555 7777877877655431 2 45566 5899998855 5555566788899
Q ss_pred EEEEEee
Q 009309 482 AVIGRVP 488 (538)
Q Consensus 482 eV~ervp 488 (538)
+..++..
T Consensus 145 ~~~~~~~ 151 (166)
T 1cjw_A 145 HPAGPCA 151 (166)
T ss_dssp EEEEECS
T ss_pred eECCccc
Confidence 8887644
No 52
>2ae6_A Acetyltransferase, GNAT family; GCN5-related N-acetyltransferase (GNAT), alpha-beta, structu genomics, PSI, protein structure initiative; HET: GOL; 2.19A {Enterococcus faecalis} SCOP: d.108.1.1
Probab=21.83 E-value=85 Score=26.51 Aligned_cols=57 Identities=14% Similarity=0.184 Sum_probs=37.2
Q ss_pred EEEeCCCCCCcchHHHhHhhhhcccCCcchhhhhhcCCccccchhhHhHHHHHHHcCCCeeeecc--CCcccccccccCC
Q 009309 403 VYLRGHEGRGIGLGHKLRAYNLQDQGHDTVQANIELGLAVDAREYGIGAQQILRDLGVRTMRLMT--NNPAKFIGLKGYG 480 (538)
Q Consensus 403 VYLr~qEGRGiGL~~Kl~ay~lQd~G~DTveAn~~lG~~~D~RdYgigA~QILrdLGV~kIrLLT--NNP~K~~aL~g~G 480 (538)
+|+. .+-||-|++.+|-.+. . +.++.+|+++|.|-+ .|+.=+.-.+.+|
T Consensus 87 l~V~-p~~rg~GiG~~ll~~~---------------------------~-~~a~~~g~~~i~l~v~~~N~~A~~~Yek~G 137 (166)
T 2ae6_A 87 IGVS-PDFQDQGIGGSLLSYI---------------------------K-DMAEISGIHKLSLRVMATNQEAIRFYEKHG 137 (166)
T ss_dssp EEEC-GGGTTSSHHHHHHHHH---------------------------H-HHHHHHTCCEEEEEEETTCHHHHHHHHHTT
T ss_pred EEEC-HHHhCCCHHHHHHHHH---------------------------H-HHHHHCCCCEEEEEeecCCHHHHHHHHHcC
Confidence 5665 6777777777655431 2 456668898888764 3554455567788
Q ss_pred cEEEEEee
Q 009309 481 LAVIGRVP 488 (538)
Q Consensus 481 IeV~ervp 488 (538)
.+.+++.+
T Consensus 138 F~~~~~~~ 145 (166)
T 2ae6_A 138 FVQEAHFK 145 (166)
T ss_dssp CEEEEEEE
T ss_pred CEEeeEEc
Confidence 88877665
No 53
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=21.66 E-value=1.1e+02 Score=29.71 Aligned_cols=36 Identities=11% Similarity=0.105 Sum_probs=27.9
Q ss_pred CCeEEEEEecCCCCCCCCChHHHHHHHHHcCCcEEe
Q 009309 269 NPVSVLSAVVDPEDGSMSSLPSLRKLALEHSIPISS 304 (538)
Q Consensus 269 ~Paavi~eiv~~~dG~ma~~~~l~~fA~~h~L~ivs 304 (538)
.+.+|+.+-.+...|...+.+++.++|++||+.+|.
T Consensus 169 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~ 204 (420)
T 1t3i_A 169 KTKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLV 204 (420)
T ss_dssp TEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEE
T ss_pred CceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEE
Confidence 566666655543379999999999999999987764
No 54
>1z4e_A Transcriptional regulator; nysgxrc target T2017, GNAT fold, structural genomics, PSI, P structure initiative; 2.00A {Bacillus halodurans} SCOP: d.108.1.1
Probab=21.62 E-value=72 Score=26.24 Aligned_cols=54 Identities=20% Similarity=0.369 Sum_probs=34.6
Q ss_pred EEEeCCCCCCcchHHHhHhhhhcccCCcchhhhhhcCCccccchhhHhHHHHHHHcCCCeeeeccC--CcccccccccCC
Q 009309 403 VYLRGHEGRGIGLGHKLRAYNLQDQGHDTVQANIELGLAVDAREYGIGAQQILRDLGVRTMRLMTN--NPAKFIGLKGYG 480 (538)
Q Consensus 403 VYLr~qEGRGiGL~~Kl~ay~lQd~G~DTveAn~~lG~~~D~RdYgigA~QILrdLGV~kIrLLTN--NP~K~~aL~g~G 480 (538)
+|+. ++-||-|++.+|-.+. . +..+..|+++|.|-+. |+.-..-.+.+|
T Consensus 91 l~V~-p~~rg~GiG~~Ll~~~---------------------------~-~~a~~~g~~~i~l~v~~~N~~a~~~Y~k~G 141 (153)
T 1z4e_A 91 VRTH-SAARGQGIGSQLVCWA---------------------------I-ERAKERGCHLIQLTTDKQRPDALRFYEQLG 141 (153)
T ss_dssp EEEC-TTSTTSSHHHHHHHHH---------------------------H-HHHHHTTEEEEEEEEETTCTTHHHHHHHHT
T ss_pred EEEC-HHHcCCCHHHHHHHHH---------------------------H-HHHHHcCCCEEEEEEccCChHHHHHHHHcC
Confidence 5675 7888888887765431 1 4456778888887653 444444456667
Q ss_pred cEEEE
Q 009309 481 LAVIG 485 (538)
Q Consensus 481 IeV~e 485 (538)
.+.+.
T Consensus 142 F~~~~ 146 (153)
T 1z4e_A 142 FKASH 146 (153)
T ss_dssp CEEEE
T ss_pred Cceec
Confidence 76654
No 55
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=21.43 E-value=4.2e+02 Score=23.56 Aligned_cols=78 Identities=13% Similarity=0.249 Sum_probs=42.8
Q ss_pred CCCCcceEEEcccCccccccCCCCCCChHHHHHHHHHHHHcCCEEEEEEeCCCCCCcchHHHhHhhhhcccCCcchhhhh
Q 009309 357 GNGQDVLVRVHSECLTGDIFGSARCDCGNQLDLAMQIIEKAGKGVVVYLRGHEGRGIGLGHKLRAYNLQDQGHDTVQANI 436 (538)
Q Consensus 357 ~~~~~vLVRVHSeCltgDvfgS~~CDCg~qL~~Al~~I~~~G~GVlVYLr~qEGRGiGL~~Kl~ay~lQd~G~DTveAn~ 436 (538)
....|++|-+|-.... ......-++.+.+.|.-|+.+ + . ||.|...+...
T Consensus 43 ~~~~p~vv~~hG~~~~-----------~~~~~~~~~~l~~~g~~v~~~-d-~--~G~G~s~~~~~--------------- 92 (315)
T 4f0j_A 43 KANGRTILLMHGKNFC-----------AGTWERTIDVLADAGYRVIAV-D-Q--VGFCKSSKPAH--------------- 92 (315)
T ss_dssp SCCSCEEEEECCTTCC-----------GGGGHHHHHHHHHTTCEEEEE-C-C--TTSTTSCCCSS---------------
T ss_pred CCCCCeEEEEcCCCCc-----------chHHHHHHHHHHHCCCeEEEe-e-c--CCCCCCCCCCc---------------
Confidence 3457899999953322 233455667777877666654 2 3 44444322110
Q ss_pred hcCCccccchhhHhHHHHHHHcCCCeeeecc
Q 009309 437 ELGLAVDAREYGIGAQQILRDLGVRTMRLMT 467 (538)
Q Consensus 437 ~lG~~~D~RdYgigA~QILrdLGV~kIrLLT 467 (538)
...+..++.-...++++.++++++.|+.
T Consensus 93 ---~~~~~~~~~~~~~~~~~~~~~~~~~l~G 120 (315)
T 4f0j_A 93 ---YQYSFQQLAANTHALLERLGVARASVIG 120 (315)
T ss_dssp ---CCCCHHHHHHHHHHHHHHTTCSCEEEEE
T ss_pred ---cccCHHHHHHHHHHHHHHhCCCceEEEE
Confidence 0112223333333678888888888774
No 56
>2fiw_A GCN5-related N-acetyltransferase:aminotransferase II; alpha-beta-alpha sandwich, GCN4-related acetyltransferase, S genomics, PSI; HET: ACO; 2.35A {Rhodopseudomonas palustris} SCOP: d.108.1.1
Probab=21.27 E-value=1.2e+02 Score=25.04 Aligned_cols=35 Identities=9% Similarity=0.001 Sum_probs=22.7
Q ss_pred HHHHHcCCCeeeeccCCcccccccccCCcEEEEEee
Q 009309 453 QILRDLGVRTMRLMTNNPAKFIGLKGYGLAVIGRVP 488 (538)
Q Consensus 453 QILrdLGV~kIrLLTNNP~K~~aL~g~GIeV~ervp 488 (538)
+.++..|++.|.|-+| +.-....+..|.+.+++..
T Consensus 109 ~~~~~~g~~~i~~~~n-~~a~~~y~k~GF~~~~~~~ 143 (172)
T 2fiw_A 109 KLAGARGALILTVDAS-DNAAEFFAKRGYVAKQRNT 143 (172)
T ss_dssp HHHHTTTCSEEEEEEC-TTTHHHHHTTTCEEEEEEE
T ss_pred HHHHhcCCcEEEEEeC-HHHHHHHHHcCCEEeccee
Confidence 4455678888888774 4444556777777766543
No 57
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=20.75 E-value=1.2e+02 Score=30.35 Aligned_cols=43 Identities=16% Similarity=0.122 Sum_probs=31.9
Q ss_pred HHHHcCCCCeEEEEEecCCCCCCCCChHHHHHHHHHcCCcEEe
Q 009309 262 LLVLAGLNPVSVLSAVVDPEDGSMSSLPSLRKLALEHSIPISS 304 (538)
Q Consensus 262 LarlAGl~Paavi~eiv~~~dG~ma~~~~l~~fA~~h~L~ivs 304 (538)
|.++..-.+.+|+++-.+...|.+.+.+++.++|++||+.++.
T Consensus 133 l~~~i~~~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~ 175 (412)
T 2cb1_A 133 VREALSAKTRAVFVETVANPALLVPDLEALATLAEEAGVALVV 175 (412)
T ss_dssp HHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEE
T ss_pred HHHHhccCCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEE
Confidence 3333333567777776644489999999999999999998764
No 58
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=20.75 E-value=82 Score=30.20 Aligned_cols=38 Identities=21% Similarity=0.263 Sum_probs=28.1
Q ss_pred CCeEEEEEecCCCCCCCCChHHHHHHHHHcCCcEEeehh
Q 009309 269 NPVSVLSAVVDPEDGSMSSLPSLRKLALEHSIPISSIID 307 (538)
Q Consensus 269 ~Paavi~eiv~~~dG~ma~~~~l~~fA~~h~L~ivsi~D 307 (538)
.+.+|+.+-.+...|.....+++.++|++||+.+|. ++
T Consensus 171 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~-De 208 (397)
T 3f9t_A 171 DVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHV-DA 208 (397)
T ss_dssp CCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEE-EC
T ss_pred CCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEE-Ec
Confidence 455555444433389999999999999999988764 44
No 59
>3g8w_A Lactococcal prophage PS3 protein 05; APC61042, acetyltransferase, staphylococcus epidermidis ATCC structural genomics; HET: NHE FLC; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=20.66 E-value=1.1e+02 Score=25.25 Aligned_cols=36 Identities=14% Similarity=0.204 Sum_probs=24.1
Q ss_pred HHHHHcCCCeeee--ccCCcccccccccCCcEEEEEee
Q 009309 453 QILRDLGVRTMRL--MTNNPAKFIGLKGYGLAVIGRVP 488 (538)
Q Consensus 453 QILrdLGV~kIrL--LTNNP~K~~aL~g~GIeV~ervp 488 (538)
+..+..|+++|.| .++|+.-..-.+.+|....+..+
T Consensus 108 ~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~~ 145 (169)
T 3g8w_A 108 QYAKEQNIETLMIAIASNNISAKVFFSSIGFENLAFEK 145 (169)
T ss_dssp HHHHHTTCCEEEEEEETTCHHHHHHHHTTTCEEEEEEE
T ss_pred HHHHHCCCCEEEEEEecCCHHHHHHHHHcCCEEeeeec
Confidence 4456778888874 45566555666778888776654
No 60
>1un8_A Dihydroxyacetone kinase; transferase; HET: MYY; 2.5A {Citrobacter freundii} SCOP: a.208.1.1 c.119.1.2 PDB: 1un9_A*
Probab=20.54 E-value=67 Score=35.29 Aligned_cols=93 Identities=23% Similarity=0.385 Sum_probs=60.6
Q ss_pred EEEEeCCCCceEEEEEEccCCCCCcceE---E--EcccCccccccCCCCCCChHHHHHHHHHHHHcCCEEEEEEeCCCCC
Q 009309 337 YCYRSKLDGTDHVAVVKGNMGNGQDVLV---R--VHSECLTGDIFGSARCDCGNQLDLAMQIIEKAGKGVVVYLRGHEGR 411 (538)
Q Consensus 337 ~~Yr~~~dg~EHlALv~Gdi~~~~~vLV---R--VHSeCltgDvfgS~~CDCg~qL~~Al~~I~~~G~GVlVYLr~qEGR 411 (538)
+.|+..... ..++||.|-=..-+|... = +=+.|..||||-|.. ..|.-.|++.+. .|.|||+.+.|-.
T Consensus 40 vv~r~~~~~-~kV~lisGGGSGHEP~h~G~VG~Gml~aav~G~vFaSPs---~~~i~~ai~a~~-~g~Gvl~ivkNYt-- 112 (552)
T 1un8_A 40 IVVRRDLNK-NNVAVISGGGSGHEPAHVGFIGKGMLTAAVCGDVFASPS---VDAVLTAIQAVT-GEAGCLLIVKNYT-- 112 (552)
T ss_dssp EEEESCCCT-TSCEEEEEEEESSTTTTGGGBSTTSBSEEEEEEETSCCC---HHHHHHHHHHHC-CTTCEEEEEESCH--
T ss_pred eEEecCCCC-CceEEEeCCCCCCCccccccccCCccceeeecCcCCCCC---HHHHHHHHHhhc-CCCCEEEEecccH--
Confidence 345544332 457888764222233211 0 334577899999885 578999988765 5679998876322
Q ss_pred CcchHHHhHhhhhcccCCcchhhhhhcCCccccchhhHhHHHHHHHcCCC-eeeecc
Q 009309 412 GIGLGHKLRAYNLQDQGHDTVQANIELGLAVDAREYGIGAQQILRDLGVR-TMRLMT 467 (538)
Q Consensus 412 GiGL~~Kl~ay~lQd~G~DTveAn~~lG~~~D~RdYgigA~QILrdLGV~-kIrLLT 467 (538)
-|--+|++++ +.++.-||+ ++-+.+
T Consensus 113 ------------------------------GD~lnF~~A~-e~a~~~gi~v~~v~v~ 138 (552)
T 1un8_A 113 ------------------------------GDRLNFGLAA-EKARRLGYNVEMLIVG 138 (552)
T ss_dssp ------------------------------HHHHHHHHHH-HHHHHTTCCEEEEEEC
T ss_pred ------------------------------HHHhhHHHHH-HHHHhcCCcEEEEEec
Confidence 2667899999 999999997 344443
No 61
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=20.25 E-value=43 Score=33.75 Aligned_cols=16 Identities=25% Similarity=0.380 Sum_probs=10.7
Q ss_pred eEEeeeccCCCccCCChhhHH
Q 009309 197 FTITVDAKFGTTTGVSASDRA 217 (538)
Q Consensus 197 FtVsVDa~~gttTGISA~DRA 217 (538)
..|-|-+ +||...|..
T Consensus 36 VlVkv~a-----~gi~~~D~~ 51 (398)
T 1kol_A 36 VILKVVS-----TNICGSDQH 51 (398)
T ss_dssp EEEEEEE-----EECCHHHHH
T ss_pred EEEEEEE-----EeechhhHH
Confidence 5666655 578877764
No 62
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=20.06 E-value=1e+02 Score=30.88 Aligned_cols=41 Identities=10% Similarity=0.177 Sum_probs=31.9
Q ss_pred CCCCeEEEEEecCCCCCCCCC----hHHHHHHHHHcCCcEEeehhH
Q 009309 267 GLNPVSVLSAVVDPEDGSMSS----LPSLRKLALEHSIPISSIIDL 308 (538)
Q Consensus 267 Gl~Paavi~eiv~~~dG~ma~----~~~l~~fA~~h~L~ivsi~DL 308 (538)
.-.+++|+++=++...|.... ++++.++|++||+.+|. +|+
T Consensus 199 ~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~-DE~ 243 (439)
T 3dxv_A 199 AGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVC-DEV 243 (439)
T ss_dssp TTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEE-ECT
T ss_pred CCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEE-ecc
Confidence 456788888876654677777 89999999999998875 554
Done!