BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 009310
         (538 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8GXR9|DHNA_ARATH NADH dehydrogenase C1, chloroplastic/mitochondrial OS=Arabidopsis
           thaliana GN=NDC1 PE=1 SV=2
          Length = 519

 Score =  710 bits (1832), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/495 (69%), Positives = 401/495 (81%), Gaps = 24/495 (4%)

Query: 44  FISFAASNSSGRNGDLVVTSEDESASQTYTWPDKKKPRICILGGGFGGLYTALRLESLVW 103
           ++S A +N+SG        S++E+A +TY+WPD K+PR+CILGGGFGGLYTALRLESLVW
Sbjct: 49  YLSRAVTNNSGTTE----ISDNETAPRTYSWPDNKRPRVCILGGGFGGLYTALRLESLVW 104

Query: 104 QDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKDRVKLLC 163
            +DKKPQV+LVDQSERFVFKPMLYELLSGEVD WEIAPRF+DLL NTG+QF +DRVK L 
Sbjct: 105 PEDKKPQVVLVDQSERFVFKPMLYELLSGEVDVWEIAPRFSDLLTNTGIQFLRDRVKTLL 164

Query: 164 PSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLED 223
           P DHLGVNG      GGTVLLESG  +EYDWLVL+LGAE KLDVVPGA E AFPF TLED
Sbjct: 165 PCDHLGVNGSEISVTGGTVLLESGFKIEYDWLVLALGAESKLDVVPGAMELAFPFYTLED 224

Query: 224 ACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTIC 283
           A RV+ KLS+LER+NF   S I+VAVVGCGY+GVELAAT+SERL+++GIVQ+INV   I 
Sbjct: 225 AIRVNEKLSKLERKNFKDGSAIKVAVVGCGYAGVELAATISERLQDRGIVQSINVSKNIL 284

Query: 284 PTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDK 343
            +   GNREAA+KVL++RKVQL+LGY V+ I+R    E                    + 
Sbjct: 285 TSAPDGNREAAMKVLTSRKVQLLLGYLVQSIKRASNLE------------------EDEG 326

Query: 344 YILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLC 403
           Y LELQPA +GLESQI EAD+VLWTVG+KPLL  +EP    +  LPLNARGQAETDETL 
Sbjct: 327 YFLELQPAERGLESQIIEADIVLWTVGAKPLLTKLEPSGPNV--LPLNARGQAETDETLR 384

Query: 404 VKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLG 463
           VKGHPRIFALGDSS+LRDS+G+ LP TAQVAFQ+ADF GWN+WAAIN+RPLLPFRFQNLG
Sbjct: 385 VKGHPRIFALGDSSSLRDSNGKILPTTAQVAFQEADFTGWNIWAAINNRPLLPFRFQNLG 444

Query: 464 EMMILGRNDAAVSPSFVEGVTLDGPIGHSARKLAYLIRLPTDEHRLKVGVSWLTKSAIDS 523
           EMM LGR DAA+SPSF+EG+TL+GPIGH+ARKLAYLIRLPTDEHR KVG+SW  KSA+DS
Sbjct: 445 EMMTLGRYDAAISPSFIEGLTLEGPIGHAARKLAYLIRLPTDEHRFKVGISWFAKSAVDS 504

Query: 524 VALLQSTLTKVLSSS 538
           +ALLQS LTKVLS S
Sbjct: 505 IALLQSNLTKVLSGS 519


>sp|O05267|YUMB_BACSU NADH dehydrogenase-like protein YumB OS=Bacillus subtilis (strain
           168) GN=yumB PE=3 SV=1
          Length = 406

 Score =  104 bits (260), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 178/412 (43%), Gaps = 71/412 (17%)

Query: 79  KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWE 138
           KP+I ILG G+GGL T  RL   V  +D    + LV++         ++E  +G +    
Sbjct: 5   KPKIVILGAGYGGLMTVTRLTKYVGPND--ADITLVNKHNYHYETTWMHEASAGTLHHDR 62

Query: 139 IAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLS 198
              +  D++  + V F +D VK +   +               V+L +G + +YD+LV+ 
Sbjct: 63  CRYQIKDVINQSRVNFVQDTVKAIKIDEK-------------KVVLANGEL-QYDYLVIG 108

Query: 199 LGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIR-----VAVVGCG 253
           LGA P+   + G  E+AFP + + +  R+ R+  EL+   +  ++  R     + V G G
Sbjct: 109 LGAVPETFGIKGLKEYAFPIANI-NTSRLLREHIELQFATYNTEAEKRPDRLTIVVGGAG 167

Query: 254 YSGV----ELAATVSERLEE----KGIVQAINVET--TICPTGTPGNREAALKVLSARKV 303
           ++G+    ELAA V E  +E    + +V+ I VE   T+ P   P   + A+  L    V
Sbjct: 168 FTGIEFLGELAARVPELCKEYDVDRSLVRIICVEAAPTVLPGFDPELVDYAVHYLEENGV 227

Query: 304 QLVLGYFVR-CIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEA 362
           +  +G  V+ C             PE                   ++   K  E +  ++
Sbjct: 228 EFKIGTAVQEC------------TPEG------------------VRVGKKDEEPEQIKS 257

Query: 363 DLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSA-LRD 421
             V+W  G +   P VE           N RG+ + +  L   GH  +F LGDSS  + +
Sbjct: 258 QTVVWAAGVRG-HPIVEEAGFE------NMRGRVKVNPDLRAPGHDNVFILGDSSLFMNE 310

Query: 422 SSGRPLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMILGRNDA 473
            + RP P TAQ+A QQ      NL   I    L  F+    G +  LG ++A
Sbjct: 311 DTERPYPPTAQIAMQQGITVAKNLGRLIKGGELEEFKPDIKGTVASLGEHNA 362


>sp|Q49W80|Y1834_STAS1 NADH dehydrogenase-like protein SSP1834 OS=Staphylococcus
           saprophyticus subsp. saprophyticus (strain ATCC 15305 /
           DSM 20229) GN=SSP1834 PE=3 SV=1
          Length = 402

 Score = 91.3 bits (225), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 176/407 (43%), Gaps = 62/407 (15%)

Query: 79  KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWE 138
           + ++ +LG G+ GL T  +L+  +  D+   +V L+++++       L+E  +G +    
Sbjct: 5   RKKVLVLGAGYAGLQTITKLQKQISADE--AEVTLINKNDYHYEATWLHEASAGTI---- 58

Query: 139 IAPRFADLLANTGVQFFKDRVKLL-CPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVL 197
               + DLL        KD+V  +      +  N     T  G        I ++D LV+
Sbjct: 59  ---SYEDLLYPVESVVNKDKVNFVKAEVTKIDRNAKKVETDAG--------IFDFDILVV 107

Query: 198 SLGAEPKLDVVPGAAEFAFPFSTLEDACRVDR----KLSELERRNFGKDSLIRVAVVGCG 253
           SLG E +   + G  ++AF    +  A ++ R    K +         D  + + V G G
Sbjct: 108 SLGFESETFGIKGMKDYAFQIENVLTARKLSRHIEDKFANYASSKQKDDKDLAIIVGGAG 167

Query: 254 YSGVELAATVSERLEE---KGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYF 310
           ++GVE    +++R+ E   K  V+   V+ T          EAA K+L     +LV  + 
Sbjct: 168 FTGVEFLGELTDRIPELCNKYGVEQSKVKITCV--------EAAPKMLPMFSDELV-NHA 218

Query: 311 VRCIRRVG-EFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTV 369
           V  +   G EF+           P +AA  N   +++++       E Q  EA+ V+W  
Sbjct: 219 VNYLENKGVEFKIGT--------PIVAA--NEKGFVVKVND-----EEQQLEANTVVWAA 263

Query: 370 GSKPLLPHVEPPNNRLHDLPLNA--RGQAETDETLCVKGHPRIFALGDSSA-LRDSSGRP 426
           G +          ++L +       RG+  T + L ++G+  IF +GD SA +     RP
Sbjct: 264 GVR---------GSKLMEESFEGVKRGRIVTKQDLTIEGYDDIFVIGDCSAFIPAGEERP 314

Query: 427 LPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMILGRNDA 473
           LP TAQ+A QQ +    N+   +  +P   F + + G +  LG +D 
Sbjct: 315 LPTTAQIATQQGEHTAKNVKNILEGQPTNEFEYVDRGTVCSLGAHDG 361


>sp|Q4L4V6|Y2010_STAHJ NADH dehydrogenase-like protein SH2010 OS=Staphylococcus
           haemolyticus (strain JCSC1435) GN=SH2010 PE=3 SV=1
          Length = 402

 Score = 89.7 bits (221), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 98/414 (23%), Positives = 180/414 (43%), Gaps = 72/414 (17%)

Query: 77  KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDA 136
           + + ++ +LG G+ GL T  +L+  +  D+    + L+++++       L+E  +G ++ 
Sbjct: 3   QDRKKVLVLGAGYAGLQTVTKLQKELSADE--ADITLINKNKYHYEATWLHEASAGTLN- 59

Query: 137 WEIAPRFADLLANTGVQFFKDRVKLL-CPSDHLGVNGPMACTHGGTVLLESGLIVEYDWL 195
                 + DL+        +D+VK +      +  N     T+ G        I +YD L
Sbjct: 60  ------YEDLIYPIESVIKEDKVKFINAEVTKIDRNAKKVETNHG--------IYDYDIL 105

Query: 196 VLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFG-----KDSLIRVAVV 250
           V++LG E +   + G  ++AF    +E A ++ R + E +  N+       D  + + V 
Sbjct: 106 VVALGFESETFGINGMKDYAFQIENIETARKLSRHI-EDKFANYAASKEKDDKDLAILVG 164

Query: 251 GCGYSGVELAATVSERLEEKGIVQAINVETTIC-PTGTPGNR------EAALKVLSARKV 303
           G G++G+E    ++ER+ E            +C   G   N+      EAA K+L     
Sbjct: 165 GAGFTGIEFLGELTERIPE------------LCNKYGVDQNKVRVTCVEAAPKMLPMFSD 212

Query: 304 QLVLGYFVRCIRRVG-EFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEA 362
           +LV  Y V  +   G EF+         A P +A   N   +++++       + Q  EA
Sbjct: 213 ELV-NYAVNYLEDRGVEFKI--------ATPIVAC--NEKGFVVKIND-----QEQQLEA 256

Query: 363 DLVLWTVGSKPLLPHVEPPNNRLHDLPLNA--RGQAETDETLCVKGHPRIFALGDSSA-L 419
              +W  G +          ++L +       RG+  T + L ++GH  IF +GD SA +
Sbjct: 257 GTAIWAAGVR---------GSKLMEESFEGVKRGRIVTKQDLTIEGHDDIFVIGDVSAFI 307

Query: 420 RDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMILGRNDA 473
                RPLP TAQ+A QQ +    ++   +N +    F + + G +  LG +D 
Sbjct: 308 PAGEERPLPTTAQIAMQQGEHVAKSIKNILNGQAATDFEYVDRGTVCSLGAHDG 361


>sp|Q5HQM1|Y527_STAEQ NADH dehydrogenase-like protein SERP0527 OS=Staphylococcus
           epidermidis (strain ATCC 35984 / RP62A) GN=SERP0527 PE=3
           SV=1
          Length = 402

 Score = 88.6 bits (218), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 174/408 (42%), Gaps = 60/408 (14%)

Query: 77  KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDA 136
           + + ++ +LG G+ GL T  +L+  +  D    ++ L++++E       L+E  +G ++ 
Sbjct: 3   QDRKKVLVLGAGYAGLQTVTKLQKELSAD--AAEITLINKNEYHYESTWLHEASAGTIN- 59

Query: 137 WEIAPRFADLLANTGVQFFKDRVKLLCPS-DHLGVNGPMACTHGGTVLLESGLIVEYDWL 195
                 + DLL        KD+V  +      +  N     T  G        + ++D L
Sbjct: 60  ------YEDLLYPVEKTVNKDKVNFVVAEVTKIDRNAKRVETDKG--------VYDFDIL 105

Query: 196 VLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFG-----KDSLIRVAVV 250
           V++LG   +   + G  E AF    +  + ++ R + E +  N+       D  + + V 
Sbjct: 106 VVALGFVSETFGIDGMKEHAFQIENVLTSRKLSRHI-EDKFANYAASKEKDDKDLSILVG 164

Query: 251 GCGYSGVELAATVSERLEE---KGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVL 307
           G G++G+E    +++R+ E   K  V    V+ T          EAA K+L      LV 
Sbjct: 165 GAGFTGIEFLGELTDRIPELCSKYGVDQSKVKLTCV--------EAAPKMLPMFSDDLV- 215

Query: 308 GYFVRCIRRVG-EFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVL 366
            Y V+ +   G EF+         A P +A   N   +++E+       E Q  EA   +
Sbjct: 216 SYAVKYLEDRGVEFKI--------ATPIVAC--NEKGFVVEVNG-----EKQQLEAGTSV 260

Query: 367 WTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSA-LRDSSGR 425
           WT G +    H+   +          RG+    + L ++GH  IF +GD SA +     R
Sbjct: 261 WTAGVRG--SHLMEES-----FEGVKRGRVINKQDLTIEGHNDIFVIGDCSAFIPAGEER 313

Query: 426 PLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMILGRNDA 473
           PLP TAQ+A QQ +    N+   +N      F++ N G +  LG ND 
Sbjct: 314 PLPTTAQIAMQQGEHTASNIKRLLNGESTQDFQYVNRGTVCSLGANDG 361


>sp|Q8CPV5|Y635_STAES NADH dehydrogenase-like protein SE_0635 OS=Staphylococcus
           epidermidis (strain ATCC 12228) GN=SE_0635 PE=3 SV=1
          Length = 402

 Score = 86.3 bits (212), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 100/408 (24%), Positives = 174/408 (42%), Gaps = 60/408 (14%)

Query: 77  KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDA 136
           + + ++ +LG G+ GL T  +L+  +  D    ++ L++++E       L+E  +G ++ 
Sbjct: 3   QDRKKVLVLGAGYAGLQTVTKLQKELSAD--AAEITLINKNEYHYESTWLHEASAGTIN- 59

Query: 137 WEIAPRFADLLANTGVQFFKDRVKLLCPS-DHLGVNGPMACTHGGTVLLESGLIVEYDWL 195
                 + DLL        K++V  +      +  N     T  G        + ++D L
Sbjct: 60  ------YEDLLYPVEKTVNKNKVNFVVAEVTKIDRNAKRVETDKG--------VYDFDIL 105

Query: 196 VLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFG-----KDSLIRVAVV 250
           V++LG   +   + G  E AF    +  + ++ R + E +  N+       D  + + V 
Sbjct: 106 VVALGFVSETFGIDGMKEHAFQIENVLTSRKLSRHI-EDKFANYAASKEKDDKDLSILVG 164

Query: 251 GCGYSGVELAATVSERLEE---KGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVL 307
           G G++G+E    +++R+ E   K  V    V+ T          EAA K+L      LV 
Sbjct: 165 GAGFTGIEFLGELTDRIPELCSKYGVDQSKVKLTCV--------EAAPKMLPMFSDDLV- 215

Query: 308 GYFVRCIRRVG-EFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVL 366
            Y V+ +   G EF+         A P +A   N   +++E+       E Q  EA   +
Sbjct: 216 SYAVKYLEDRGVEFKI--------ATPIVAC--NEKGFVVEVNG-----EKQQLEAGTSV 260

Query: 367 WTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSA-LRDSSGR 425
           WT G +    H+   +          RG+    + L ++GH  IF +GD SA +     R
Sbjct: 261 WTAGVRG--SHLMEES-----FEGVKRGRIINKQDLTIEGHNDIFVIGDCSAFIPADEER 313

Query: 426 PLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMILGRNDA 473
           PLP TAQ+A QQ +    N+   +N      F++ N G +  LG ND 
Sbjct: 314 PLPTTAQIAMQQGEHTASNIKRLLNGESTQDFQYVNRGTVCSLGANDG 361


>sp|Q8NXG0|Y823_STAAW NADH dehydrogenase-like protein MW0823 OS=Staphylococcus aureus
           (strain MW2) GN=MW0823 PE=3 SV=1
          Length = 402

 Score = 82.0 bits (201), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 99/446 (22%), Positives = 184/446 (41%), Gaps = 67/446 (15%)

Query: 77  KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDA 136
           + + ++ +LG G+ GL T  +L+  +  ++   ++ L++++E       L+E  +G ++ 
Sbjct: 3   QDRKKVLVLGAGYAGLQTVTKLQKAISTEE--AEITLINKNEYHYEATWLHEASAGTLNY 60

Query: 137 WEIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLV 196
            ++      +L    V F +  V        +  +     T+ G        I ++D LV
Sbjct: 61  EDVLYPVESVLKKDKVNFVQAEVT------KIDRDAKKVETNQG--------IYDFDILV 106

Query: 197 LSLGAEPKLDVVPGAAEFAFPFSTL----EDACRVDRKLSELERRNFGKDSLIRVAVVGC 252
           ++LG   +   + G  + AF    +    E +  ++ K +         D+ + + V G 
Sbjct: 107 VALGFVSETFGIEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGA 166

Query: 253 GYSGVELAATVSERLEE---KGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGY 309
           G++GVE    +++R+ E   K  V    V+ T          EAA K+L     +LV   
Sbjct: 167 GFTGVEFLGELTDRIPELCSKYGVDQNKVKITCV--------EAAPKMLPMFSEELVNHA 218

Query: 310 FVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTV 369
                 R  EF+         A P +A   N   +++E+       E Q   A   +W  
Sbjct: 219 VSYLEDRGVEFKI--------ATPIVAC--NEKGFVVEVDG-----EKQQLNAGTSVWAA 263

Query: 370 GSKPLLPHVEPPNNRLHDLPLNA--RGQAETDETLCVKGHPRIFALGDSSA-LRDSSGRP 426
           G +          ++L +       RG+  T + L + G+  IF +GD SA +     RP
Sbjct: 264 GVR---------GSKLMEESFEGVKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEERP 314

Query: 427 LPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMILGRNDAAVSPSFVEGVTLD 486
           LP TAQ+A QQ +    N+   +N      F + + G +  LG +D         G+  D
Sbjct: 315 LPTTAQIAMQQGESVAKNIKRILNGESTEEFEYVDRGTVCSLGSHDGV-------GMVFD 367

Query: 487 GPIGHSARKLAYLIRLPTDEHRLKVG 512
            PI  + +K A++ ++       K+G
Sbjct: 368 KPI--AGKKAAFMKKVIDTRAVFKIG 391


>sp|Q6GAY5|Y811_STAAS NADH dehydrogenase-like protein SAS0811 OS=Staphylococcus aureus
           (strain MSSA476) GN=SAS0811 PE=3 SV=1
          Length = 402

 Score = 82.0 bits (201), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 99/446 (22%), Positives = 184/446 (41%), Gaps = 67/446 (15%)

Query: 77  KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDA 136
           + + ++ +LG G+ GL T  +L+  +  ++   ++ L++++E       L+E  +G ++ 
Sbjct: 3   QDRKKVLVLGAGYAGLQTVTKLQKAISTEE--AEITLINKNEYHYEATWLHEASAGTLNY 60

Query: 137 WEIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLV 196
            ++      +L    V F +  V        +  +     T+ G        I ++D LV
Sbjct: 61  EDVLYPVESVLKKDKVNFVQAEVT------KIDRDAKKVETNQG--------IYDFDILV 106

Query: 197 LSLGAEPKLDVVPGAAEFAFPFSTL----EDACRVDRKLSELERRNFGKDSLIRVAVVGC 252
           ++LG   +   + G  + AF    +    E +  ++ K +         D+ + + V G 
Sbjct: 107 VALGFVSETFGIEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGA 166

Query: 253 GYSGVELAATVSERLEE---KGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGY 309
           G++GVE    +++R+ E   K  V    V+ T          EAA K+L     +LV   
Sbjct: 167 GFTGVEFLGELTDRIPELCSKYGVDQNKVKITCV--------EAAPKMLPMFSEELVNHA 218

Query: 310 FVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTV 369
                 R  EF+         A P +A   N   +++E+       E Q   A   +W  
Sbjct: 219 VSYLEDRGVEFKI--------ATPIVAC--NEKGFVVEVDG-----EKQQLNAGTSVWAA 263

Query: 370 GSKPLLPHVEPPNNRLHDLPLNA--RGQAETDETLCVKGHPRIFALGDSSA-LRDSSGRP 426
           G +          ++L +       RG+  T + L + G+  IF +GD SA +     RP
Sbjct: 264 GVR---------GSKLMEESFEGVKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEERP 314

Query: 427 LPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMILGRNDAAVSPSFVEGVTLD 486
           LP TAQ+A QQ +    N+   +N      F + + G +  LG +D         G+  D
Sbjct: 315 LPTTAQIAMQQGESVAKNIKRILNGESTEEFEYVDRGTVCSLGSHDGV-------GMVFD 367

Query: 487 GPIGHSARKLAYLIRLPTDEHRLKVG 512
            PI  + +K A++ ++       K+G
Sbjct: 368 KPI--AGKKAAFMKKVIDTRAVFKIG 391


>sp|Q2YWP9|Y807_STAAB NADH dehydrogenase-like protein SAB0807 OS=Staphylococcus aureus
           (strain bovine RF122 / ET3-1) GN=SAB0807 PE=3 SV=1
          Length = 402

 Score = 79.0 bits (193), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 98/446 (21%), Positives = 183/446 (41%), Gaps = 67/446 (15%)

Query: 77  KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDA 136
           + + ++ +LG G+ GL T  +L+  +  ++   ++ L++++E       L+E  +G ++ 
Sbjct: 3   QDRKKVLVLGAGYAGLQTVTKLQKTISTEE--AEITLINKNEYHYEATWLHEASAGTLNY 60

Query: 137 WEIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLV 196
            ++      +L    V F +  V        +  +     T+ G        I ++D LV
Sbjct: 61  EDVLYPVESVLKKDKVNFVQAEVT------KIDRDAKKVETNQG--------IYDFDILV 106

Query: 197 LSLGAEPKLDVVPGAAEFAFPFSTL----EDACRVDRKLSELERRNFGKDSLIRVAVVGC 252
           ++LG   +   + G  + AF    +    E +  ++ K +         D+ + + V G 
Sbjct: 107 VALGFVSETFGIEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGA 166

Query: 253 GYSGVELAATVSERLEE---KGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGY 309
           G++GVE    +++R+ E   K  V    V+ T          EAA K+L     +LV   
Sbjct: 167 GFTGVEFLGELTDRIPELCSKYGVDQNKVKITCV--------EAAPKMLPMFSEELVNHA 218

Query: 310 FVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTV 369
                 R  EF+         A P +A   N   +++E+       E Q   A   +W  
Sbjct: 219 VSYLEDRGVEFKI--------ATPIVAC--NEKGFVVEVDG-----EKQQLNAGTSVWAA 263

Query: 370 GSKPLLPHVEPPNNRLHDLPLNA--RGQAETDETLCVKGHPRIFALGDSSA-LRDSSGRP 426
           G +          ++L +       RG+  T + L + G+  IF +GD SA +     RP
Sbjct: 264 GVR---------GSKLMEESFEGVKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEERP 314

Query: 427 LPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMILGRNDAAVSPSFVEGVTLD 486
           LP TAQ+A QQ +    N+   +N      F + + G +  LG +D         G+   
Sbjct: 315 LPTTAQIAMQQGESVAKNIKRILNGESTEEFEYVDRGTVCSLGSHDGV-------GMVFG 367

Query: 487 GPIGHSARKLAYLIRLPTDEHRLKVG 512
            PI  + +K A++ ++       K+G
Sbjct: 368 KPI--AGKKAAFMKKVIDTRAVFKIG 391


>sp|Q5HHE4|Y944_STAAC NADH dehydrogenase-like protein SACOL0944 OS=Staphylococcus aureus
           (strain COL) GN=SACOL0944 PE=3 SV=1
          Length = 402

 Score = 79.0 bits (193), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 98/446 (21%), Positives = 183/446 (41%), Gaps = 67/446 (15%)

Query: 77  KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDA 136
           + + ++ +LG G+ GL T  +L+  +  ++   ++ L++++E       L+E  +G ++ 
Sbjct: 3   QDRKKVLVLGAGYAGLQTVTKLQKAISTEE--AEITLINKNEYHYEATWLHEASAGTLNY 60

Query: 137 WEIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLV 196
            ++      +L    V F +  V        +  +     T+ G        I ++D LV
Sbjct: 61  EDVLYPVESVLKKDKVNFVQAEVT------KIDRDAKKVETNQG--------IYDFDILV 106

Query: 197 LSLGAEPKLDVVPGAAEFAFPFSTL----EDACRVDRKLSELERRNFGKDSLIRVAVVGC 252
           ++LG   +   + G  + AF    +    E +  ++ K +         D+ + + V G 
Sbjct: 107 VALGFVSETFGIEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGA 166

Query: 253 GYSGVELAATVSERLEE---KGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGY 309
           G++GVE    +++R+ E   K  V    V+ T          EAA K+L     +LV   
Sbjct: 167 GFTGVEFLGELTDRIPELCSKYGVDQNKVKITCV--------EAAPKMLPMFSEELVNHA 218

Query: 310 FVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTV 369
                 R  EF+         A P +A   N   +++E+       E Q   A   +W  
Sbjct: 219 VSYLEDRGVEFKI--------ATPIVAC--NEKGFVVEVDG-----EKQQLNAGTSVWAA 263

Query: 370 GSKPLLPHVEPPNNRLHDLPLNA--RGQAETDETLCVKGHPRIFALGDSSA-LRDSSGRP 426
           G +          ++L +       RG+  T + L + G+  IF +GD SA +     RP
Sbjct: 264 GVR---------GSKLMEESFEGVKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEERP 314

Query: 427 LPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMILGRNDAAVSPSFVEGVTLD 486
           LP TAQ+A QQ +    N+   +N      F + + G +  LG +D         G+   
Sbjct: 315 LPTTAQIAMQQGESVAKNIKRILNGESTEEFEYVDRGTVCSLGSHDGV-------GMVFG 367

Query: 487 GPIGHSARKLAYLIRLPTDEHRLKVG 512
            PI  + +K A++ ++       K+G
Sbjct: 368 KPI--AGKKAAFMKKVIDTRAVFKIG 391


>sp|Q99VE0|Y941_STAAM NADH dehydrogenase-like protein SAV0941 OS=Staphylococcus aureus
           (strain Mu50 / ATCC 700699) GN=SAV0941 PE=1 SV=1
          Length = 402

 Score = 79.0 bits (193), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 98/446 (21%), Positives = 183/446 (41%), Gaps = 67/446 (15%)

Query: 77  KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDA 136
           + + ++ +LG G+ GL T  +L+  +  ++   ++ L++++E       L+E  +G ++ 
Sbjct: 3   QDRKKVLVLGAGYAGLQTVTKLQKAISTEE--AEITLINKNEYHYEATWLHEASAGTLNY 60

Query: 137 WEIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLV 196
            ++      +L    V F +  V        +  +     T+ G        I ++D LV
Sbjct: 61  EDVLYPVESVLKKDKVNFVQAEVT------KIDRDAKKVETNQG--------IYDFDILV 106

Query: 197 LSLGAEPKLDVVPGAAEFAFPFSTL----EDACRVDRKLSELERRNFGKDSLIRVAVVGC 252
           ++LG   +   + G  + AF    +    E +  ++ K +         D+ + + V G 
Sbjct: 107 VALGFVSETFGIEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGA 166

Query: 253 GYSGVELAATVSERLEE---KGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGY 309
           G++GVE    +++R+ E   K  V    V+ T          EAA K+L     +LV   
Sbjct: 167 GFTGVEFLGELTDRIPELCSKYGVDQNKVKITCV--------EAAPKMLPMFSEELVNHA 218

Query: 310 FVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTV 369
                 R  EF+         A P +A   N   +++E+       E Q   A   +W  
Sbjct: 219 VSYLEDRGVEFKI--------ATPIVAC--NEKGFVVEVDG-----EKQQLNAGTSVWAA 263

Query: 370 GSKPLLPHVEPPNNRLHDLPLNA--RGQAETDETLCVKGHPRIFALGDSSA-LRDSSGRP 426
           G +          ++L +       RG+  T + L + G+  IF +GD SA +     RP
Sbjct: 264 GVR---------GSKLMEESFEGVKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEERP 314

Query: 427 LPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMILGRNDAAVSPSFVEGVTLD 486
           LP TAQ+A QQ +    N+   +N      F + + G +  LG +D         G+   
Sbjct: 315 LPTTAQIAMQQGESVAKNIKRILNGESTEEFEYVDRGTVCSLGSHDGV-------GMVFG 367

Query: 487 GPIGHSARKLAYLIRLPTDEHRLKVG 512
            PI  + +K A++ ++       K+G
Sbjct: 368 KPI--AGKKAAFMKKVIDTRAVFKIG 391


>sp|Q6GIE7|Y903_STAAR NADH dehydrogenase-like protein SAR0903 OS=Staphylococcus aureus
           (strain MRSA252) GN=SAR0903 PE=3 SV=1
          Length = 402

 Score = 79.0 bits (193), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 98/446 (21%), Positives = 183/446 (41%), Gaps = 67/446 (15%)

Query: 77  KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDA 136
           + + ++ +LG G+ GL T  +L+  +  ++   ++ L++++E       L+E  +G ++ 
Sbjct: 3   QDRKKVLVLGAGYAGLQTVTKLQKAISTEE--AEITLINKNEYHYEATWLHEASAGTLNY 60

Query: 137 WEIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLV 196
            ++      +L    V F +  V        +  +     T+ G        I ++D LV
Sbjct: 61  EDVLYPVESVLKKDKVNFVQAEVT------KIDRDAKKVETNQG--------IYDFDILV 106

Query: 197 LSLGAEPKLDVVPGAAEFAFPFSTL----EDACRVDRKLSELERRNFGKDSLIRVAVVGC 252
           ++LG   +   + G  + AF    +    E +  ++ K +         D+ + + V G 
Sbjct: 107 VALGFVSETFGIEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGA 166

Query: 253 GYSGVELAATVSERLEE---KGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGY 309
           G++GVE    +++R+ E   K  V    V+ T          EAA K+L     +LV   
Sbjct: 167 GFTGVEFLGELTDRIPELCSKYGVDQNKVKITCV--------EAAPKMLPMFSEELVNHA 218

Query: 310 FVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTV 369
                 R  EF+         A P +A   N   +++E+       E Q   A   +W  
Sbjct: 219 VSYLEDRGVEFKI--------ATPIVAC--NEKGFVVEVDG-----EKQQLNAGTSVWAA 263

Query: 370 GSKPLLPHVEPPNNRLHDLPLNA--RGQAETDETLCVKGHPRIFALGDSSA-LRDSSGRP 426
           G +          ++L +       RG+  T + L + G+  IF +GD SA +     RP
Sbjct: 264 GVR---------GSKLMEESFEGVKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEERP 314

Query: 427 LPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMILGRNDAAVSPSFVEGVTLD 486
           LP TAQ+A QQ +    N+   +N      F + + G +  LG +D         G+   
Sbjct: 315 LPTTAQIAMQQGESVAKNIKRILNGESTEEFEYVDRGTVCSLGSHDGV-------GMVFG 367

Query: 487 GPIGHSARKLAYLIRLPTDEHRLKVG 512
            PI  + +K A++ ++       K+G
Sbjct: 368 KPI--AGKKAAFMKKVIDTRAVFKIG 391


>sp|Q2FZV7|Y878_STAA8 NADH dehydrogenase-like protein SAOUHSC_00878 OS=Staphylococcus
           aureus (strain NCTC 8325) GN=SAOUHSC_00878 PE=3 SV=1
          Length = 402

 Score = 79.0 bits (193), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 98/446 (21%), Positives = 183/446 (41%), Gaps = 67/446 (15%)

Query: 77  KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDA 136
           + + ++ +LG G+ GL T  +L+  +  ++   ++ L++++E       L+E  +G ++ 
Sbjct: 3   QDRKKVLVLGAGYAGLQTVTKLQKAISTEE--AEITLINKNEYHYEATWLHEASAGTLNY 60

Query: 137 WEIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLV 196
            ++      +L    V F +  V        +  +     T+ G        I ++D LV
Sbjct: 61  EDVLYPVESVLKKDKVNFVQAEVT------KIDRDAKKVETNQG--------IYDFDILV 106

Query: 197 LSLGAEPKLDVVPGAAEFAFPFSTL----EDACRVDRKLSELERRNFGKDSLIRVAVVGC 252
           ++LG   +   + G  + AF    +    E +  ++ K +         D+ + + V G 
Sbjct: 107 VALGFVSETFGIEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGA 166

Query: 253 GYSGVELAATVSERLEE---KGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGY 309
           G++GVE    +++R+ E   K  V    V+ T          EAA K+L     +LV   
Sbjct: 167 GFTGVEFLGELTDRIPELCSKYGVDQNKVKITCV--------EAAPKMLPMFSEELVNHA 218

Query: 310 FVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTV 369
                 R  EF+         A P +A   N   +++E+       E Q   A   +W  
Sbjct: 219 VSYLEDRGVEFKI--------ATPIVAC--NEKGFVVEVDG-----EKQQLNAGTSVWAA 263

Query: 370 GSKPLLPHVEPPNNRLHDLPLNA--RGQAETDETLCVKGHPRIFALGDSSA-LRDSSGRP 426
           G +          ++L +       RG+  T + L + G+  IF +GD SA +     RP
Sbjct: 264 GVR---------GSKLMEESFEGVKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEERP 314

Query: 427 LPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMILGRNDAAVSPSFVEGVTLD 486
           LP TAQ+A QQ +    N+   +N      F + + G +  LG +D         G+   
Sbjct: 315 LPTTAQIAMQQGESVAKNIKRILNGESTEEFEYVDRGTVCSLGSHDGV-------GMVFG 367

Query: 487 GPIGHSARKLAYLIRLPTDEHRLKVG 512
            PI  + +K A++ ++       K+G
Sbjct: 368 KPI--AGKKAAFMKKVIDTRAVFKIG 391


>sp|Q2FID4|Y844_STAA3 NADH dehydrogenase-like protein SAUSA300_0844 OS=Staphylococcus
           aureus (strain USA300) GN=SAUSA300_0844 PE=3 SV=1
          Length = 402

 Score = 79.0 bits (193), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 98/446 (21%), Positives = 183/446 (41%), Gaps = 67/446 (15%)

Query: 77  KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDA 136
           + + ++ +LG G+ GL T  +L+  +  ++   ++ L++++E       L+E  +G ++ 
Sbjct: 3   QDRKKVLVLGAGYAGLQTVTKLQKAISTEE--AEITLINKNEYHYEATWLHEASAGTLNY 60

Query: 137 WEIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLV 196
            ++      +L    V F +  V        +  +     T+ G        I ++D LV
Sbjct: 61  EDVLYPVESVLKKDKVNFVQAEVT------KIDRDAKKVETNQG--------IYDFDILV 106

Query: 197 LSLGAEPKLDVVPGAAEFAFPFSTL----EDACRVDRKLSELERRNFGKDSLIRVAVVGC 252
           ++LG   +   + G  + AF    +    E +  ++ K +         D+ + + V G 
Sbjct: 107 VALGFVSETFGIEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGA 166

Query: 253 GYSGVELAATVSERLEE---KGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGY 309
           G++GVE    +++R+ E   K  V    V+ T          EAA K+L     +LV   
Sbjct: 167 GFTGVEFLGELTDRIPELCSKYGVDQNKVKITCV--------EAAPKMLPMFSEELVNHA 218

Query: 310 FVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTV 369
                 R  EF+         A P +A   N   +++E+       E Q   A   +W  
Sbjct: 219 VSYLEDRGVEFKI--------ATPIVAC--NEKGFVVEVDG-----EKQQLNAGTSVWAA 263

Query: 370 GSKPLLPHVEPPNNRLHDLPLNA--RGQAETDETLCVKGHPRIFALGDSSA-LRDSSGRP 426
           G +          ++L +       RG+  T + L + G+  IF +GD SA +     RP
Sbjct: 264 GVR---------GSKLMEESFEGVKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEERP 314

Query: 427 LPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMILGRNDAAVSPSFVEGVTLD 486
           LP TAQ+A QQ +    N+   +N      F + + G +  LG +D         G+   
Sbjct: 315 LPTTAQIAMQQGESVAKNIKRILNGESTEEFEYVDRGTVCSLGSHDGV-------GMVFG 367

Query: 487 GPIGHSARKLAYLIRLPTDEHRLKVG 512
            PI  + +K A++ ++       K+G
Sbjct: 368 KPI--AGKKAAFMKKVIDTRAVFKIG 391


>sp|Q7A6J4|Y802_STAAN NADH dehydrogenase-like protein SA0802 OS=Staphylococcus aureus
           (strain N315) GN=SA0802 PE=1 SV=1
          Length = 402

 Score = 79.0 bits (193), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 98/446 (21%), Positives = 183/446 (41%), Gaps = 67/446 (15%)

Query: 77  KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDA 136
           + + ++ +LG G+ GL T  +L+  +  ++   ++ L++++E       L+E  +G ++ 
Sbjct: 3   QDRKKVLVLGAGYAGLQTVTKLQKAISTEE--AEITLINKNEYHYEATWLHEASAGTLNY 60

Query: 137 WEIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLV 196
            ++      +L    V F +  V        +  +     T+ G        I ++D LV
Sbjct: 61  EDVLYPVESVLKKDKVNFVQAEVT------KIDRDAKKVETNQG--------IYDFDILV 106

Query: 197 LSLGAEPKLDVVPGAAEFAFPFSTL----EDACRVDRKLSELERRNFGKDSLIRVAVVGC 252
           ++LG   +   + G  + AF    +    E +  ++ K +         D+ + + V G 
Sbjct: 107 VALGFVSETFGIEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGA 166

Query: 253 GYSGVELAATVSERLEE---KGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGY 309
           G++GVE    +++R+ E   K  V    V+ T          EAA K+L     +LV   
Sbjct: 167 GFTGVEFLGELTDRIPELCSKYGVDQNKVKITCV--------EAAPKMLPMFSEELVNHA 218

Query: 310 FVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTV 369
                 R  EF+         A P +A   N   +++E+       E Q   A   +W  
Sbjct: 219 VSYLEDRGVEFKI--------ATPIVAC--NEKGFVVEVDG-----EKQQLNAGTSVWAA 263

Query: 370 GSKPLLPHVEPPNNRLHDLPLNA--RGQAETDETLCVKGHPRIFALGDSSA-LRDSSGRP 426
           G +          ++L +       RG+  T + L + G+  IF +GD SA +     RP
Sbjct: 264 GVR---------GSKLMEESFEGVKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEERP 314

Query: 427 LPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMILGRNDAAVSPSFVEGVTLD 486
           LP TAQ+A QQ +    N+   +N      F + + G +  LG +D         G+   
Sbjct: 315 LPTTAQIAMQQGESVAKNIKRILNGESTEEFEYVDRGTVCSLGSHDGV-------GMVFG 367

Query: 487 GPIGHSARKLAYLIRLPTDEHRLKVG 512
            PI  + +K A++ ++       K+G
Sbjct: 368 KPI--AGKKAAFMKKVIDTRAVFKIG 391


>sp|P44856|DHNA_HAEIN NADH dehydrogenase OS=Haemophilus influenzae (strain ATCC 51907 /
           DSM 11121 / KW20 / Rd) GN=ndh PE=3 SV=1
          Length = 444

 Score = 77.4 bits (189), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 91/390 (23%), Positives = 161/390 (41%), Gaps = 67/390 (17%)

Query: 107 KKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKDRVKLLCPSD 166
           K+ +V LVD++   ++KP+L+E+ +G +D    +  +     N    F +  +  +    
Sbjct: 28  KQAKVTLVDRNATHLWKPLLHEIATGVMDDGVDSLSYRAHGKNHFFSFEQGSIIRINREQ 87

Query: 167 HLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACR 226
                 P+    G  +++     + YD+LV+++G++       G A+      + + A R
Sbjct: 88  KYVELAPVYGQEGDMLVIARR--IPYDYLVIAIGSKSNDFNTKGVADNCIFLDSSKQALR 145

Query: 227 VDRKLSEL-----ERR---NFGKDSL---------IRVAVVGCGYSGVELAATVSERLEE 269
              KL EL     E R   + G++           + +A+VG G +GVEL A +    E+
Sbjct: 146 FQHKLLELFLKFSENRALDDIGEEEFKQKLVDENKVNIAIVGGGATGVELTAELYHAAED 205

Query: 270 -----KGIVQAINVETTICPTGT------PGNREAALKVLSARKVQLVLGYFVRCIRRVG 318
                 G + +  ++ T+   GT      P N  AA  VL   K    +G  V+    + 
Sbjct: 206 LSSYGYGKIDSSCLQVTLVEAGTRLLPALPENLSAA--VLDELKE---MGTNVQLNTMIT 260

Query: 319 EFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHV 378
           E           A PN    K+  +                 +ADL++W  G +      
Sbjct: 261 E-----------AQPNTLITKDGGE----------------IKADLIVWAAGVRA----- 288

Query: 379 EPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQA 438
                +   L +N   Q    +TL       IFA+GD +AL  S+G+ +P  AQ A Q A
Sbjct: 289 STVTQQFDGLEINRINQLVVKDTLQTTVDDSIFAIGDCAALIQSNGKLVPPRAQAAHQMA 348

Query: 439 DFAGWNLWAAINDRPLLPFRFQNLGEMMIL 468
                N++A   ++PL  F++ + G ++ L
Sbjct: 349 KACAKNIFALFENKPLKSFKYNDKGTLVSL 378


>sp|P00393|DHNA_ECOLI NADH dehydrogenase OS=Escherichia coli (strain K12) GN=ndh PE=1
           SV=2
          Length = 434

 Score = 75.9 bits (185), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 89/379 (23%), Positives = 157/379 (41%), Gaps = 59/379 (15%)

Query: 107 KKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKDRVKLLCPSD 166
           KK ++ LVD++   ++KP+L+E+ +G +D    A  +     N G QF    V  +    
Sbjct: 32  KKAKITLVDRNHSHLWKPLLHEVATGSLDEGVDALSYLAHARNHGFQFQLGSVIDIDREA 91

Query: 167 HLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACR 226
                  +    G  ++ E    + YD LV++LG+       PG  E          A R
Sbjct: 92  KTITIAELRDEKGELLVPERK--IAYDTLVMALGSTSNDFNTPGVKENCIFLDNPHQARR 149

Query: 227 VDRKLSELERR---NFGKDSLIRVAVVGCGYSGVELAATVSERLEE------KGIV-QAI 276
             +++  L  +   N G +  + +A+VG G +GVEL+A +   +++      KG+  +A+
Sbjct: 150 FHQEMLNLFLKYSANLGANGKVNIAIVGGGATGVELSAELHNAVKQLHSYGYKGLTNEAL 209

Query: 277 NVETT-----ICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGA 331
           NV        I P   P    AA   L+   V+++    V                    
Sbjct: 210 NVTLVEAGERILPALPPRISAAAHNELTKLGVRVLTQTMV-------------------- 249

Query: 332 IPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPN--NRLHDLP 389
               +AD+            +   + +  EADL++W  G       ++ P+    +  L 
Sbjct: 250 ---TSADEG----------GLHTKDGEYIEADLMVWAAG-------IKAPDFLKDIGGLE 289

Query: 390 LNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAI 449
            N   Q   + TL     P I+A+GD ++     G  +P  AQ A Q A  A  N+ A +
Sbjct: 290 TNRINQLVVEPTLQTTRDPDIYAIGDCASCPRPEGGFVPPRAQAAHQMATCAMNNILAQM 349

Query: 450 NDRPLLPFRFQNLGEMMIL 468
           N +PL  +++++ G ++ L
Sbjct: 350 NGKPLKNYQYKDHGSLVSL 368


>sp|O80874|NDA2_ARATH Alternative NAD(P)H dehydrogenase 2, mitochondrial OS=Arabidopsis
           thaliana GN=NDA2 PE=1 SV=1
          Length = 508

 Score = 70.9 bits (172), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 114/478 (23%), Positives = 190/478 (39%), Gaps = 88/478 (18%)

Query: 78  KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAW 137
           +KPR+ +LG G+ G      +++ ++       V+ V      VF P+L     G ++  
Sbjct: 70  EKPRVVVLGSGWAGCRLMKGIDTNLYD------VVCVSPRNHMVFTPLLASTCVGTLEFR 123

Query: 138 EIAPRFADLL----ANTGVQFFKDRVKLLCPSDHLGVNGPMAC---THGGTVLLESGLIV 190
            +A   + +        G  FF      L    H      + C   T G   L      +
Sbjct: 124 SVAEPISRIQPAISREPGSFFFLANCSRLDADAH-----EVHCETLTDGLNTLKPWKFKI 178

Query: 191 EYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKL------------SELERRN 238
            YD LV++ GAE     + G  E A     +  A  + RKL            S+ E+R 
Sbjct: 179 AYDKLVIASGAEASTFGIHGVMENAIFLREVHHAQEIRRKLLLNLMLSDTPGISKEEKRR 238

Query: 239 FGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVL 298
                ++     G  +SG EL+  + + + ++      ++  T+               +
Sbjct: 239 LLHCVVVGGGPTGVEFSG-ELSDFIMKDVRQRYAHVKDDIHVTL---------------I 282

Query: 299 SARKVQLVLGYFVRCIRRVGEFEASVKQ-PESGA--IPNIAADKNSDKYILELQPAIKGL 355
            AR +   L  F   +RR      ++KQ  +SG   +  I  D  S K IL+      G 
Sbjct: 283 EARDI---LSSFDDRLRRY-----AIKQLNKSGVRFVRGIVKDVQSQKLILD-----DGT 329

Query: 356 ESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGD 415
           E       L++W+ G  P       P  R   LP +  G+   DE + V     +FA+GD
Sbjct: 330 E---VPYGLLVWSTGVGP------SPFVRSLGLPKDPTGRIGIDEWMRVPSVQDVFAIGD 380

Query: 416 SSALRDSSGRP-LPATAQVAFQQADFAGWNLWAAIND------------RPLLPFRFQNL 462
            S   +++G+P LPA AQVA ++  +   NL  AI                 +PF +++L
Sbjct: 381 CSGYLETTGKPTLPALAQVAEREGKYLA-NLLNAIGKGNGGRANSAKEIELGVPFVYKHL 439

Query: 463 GEMMILGRNDAAV---SPSFVEGVTLDGPIGHSARKLAYLIRLPTDEHRLKVGVSWLT 517
           G M  +GR  A V        +G+++ G +     + AYL R+ +  +R  V ++W T
Sbjct: 440 GSMATIGRYKALVDLRESKDAKGISMTGFVSWFIWRSAYLTRVISWRNRFYVAINWFT 497


>sp|P80861|YJLD_BACSU NADH dehydrogenase-like protein YjlD OS=Bacillus subtilis (strain
           168) GN=yjlD PE=1 SV=3
          Length = 392

 Score = 66.2 bits (160), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 95/402 (23%), Positives = 157/402 (39%), Gaps = 61/402 (15%)

Query: 81  RICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIA 140
            I ILG G+GG+ +AL +     ++  + +V +V++         L+ L +G V    +A
Sbjct: 4   HIVILGAGYGGVLSALTVRKHYTKE--QARVTVVNKYPTHQIITELHRLAAGNVSEKAVA 61

Query: 141 PRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLG 200
                L     +      V                      V L  G  + YD LV+ LG
Sbjct: 62  MPLEKLFKGKDIDLKIAEVSSFSVDKK-------------EVALADGSTLTYDALVVGLG 108

Query: 201 AEPKLDVVPGAAEFAFPFSTLEDACR----VDRKLSELERRNFGKDSLIRVAVVGCGYSG 256
           +      +PG  E +    +  DA +    V+ ++ E  +     D+ I +   G   +G
Sbjct: 109 SVTAYFGIPGLEENSMVLKSAADANKVFQHVEDRVREYSKTKNEADATILIGGGGL--TG 166

Query: 257 VELAATVSE---RLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRC 313
           VEL   +++    L +K  V    ++  +         EA  K+L      L+       
Sbjct: 167 VELVGELADIMPNLAKKYGVDHKEIKLKLV--------EAGPKILPVLPDDLIERATASL 218

Query: 314 IRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVG--S 371
            +R  EF   +  P +    N+   K+  K +                A+  +WT G   
Sbjct: 219 EKRGVEFLTGL--PVTNVEGNVIDLKDGSKVV----------------ANTFVWTGGVQG 260

Query: 372 KPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATA 431
            PL+            L +N RG+A  ++ L    H  +F  GDS+      GRP P TA
Sbjct: 261 NPLVGE--------SGLEVN-RGRATVNDFLQSTSHEDVFVAGDSAVYFGPDGRPYPPTA 311

Query: 432 QVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMILGRNDA 473
           Q+A+Q  +  G+NL+A +  + L  F+  N G +  LGR DA
Sbjct: 312 QIAWQMGELIGYNLFAYLEGKTLETFKPVNSGTLASLGRKDA 353


>sp|O14121|NDH1_SCHPO Probable NADH-ubiquinone oxidoreductase C3A11.07, mitochondrial
           OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
           GN=SPAC3A11.07 PE=3 SV=1
          Length = 551

 Score = 65.1 bits (157), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 112/496 (22%), Positives = 204/496 (41%), Gaps = 97/496 (19%)

Query: 75  PDKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEV 134
           PD  K  + +LG G+G       +++ ++       V++V     F+F  +L    +G V
Sbjct: 87  PDPSKKTLVVLGAGWGATSILRTIDTSLFN------VIVVSPRNYFLFTSLLPSTATGSV 140

Query: 135 DAWEIAPRFADLLANTG--VQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEY 192
               I      +L +    V+F++     +  +D   ++     T G  +  E    ++Y
Sbjct: 141 HTRSIVQPIRYMLRHKSCYVKFYEAECTDV-DADKKVIHIKKTTTDGVDLEQE----IKY 195

Query: 193 DWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVD-RKLSELERRNFG------KDSLI 245
           D+LV S GAE +   +PG AE+      + DA ++  R L  LE+  F       +   +
Sbjct: 196 DYLVCSHGAETQTFNIPGIAEYGCFLKEIWDAQKIRARILHCLEQAQFKDLPAETRRRYV 255

Query: 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQL 305
              VVG G +G+E A  +++ +E+   +++   E            + A+ ++ A  +  
Sbjct: 256 HTVVVGGGPTGMEFAGEMADFIEDD--LKSWYPELA---------DDFAVTLVEA--LPS 302

Query: 306 VLGYFVRCIRRVGE--FEAS-VKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEA 362
           VL  F   +R   +  F++S +K   + A+  + A+       +E++      + ++   
Sbjct: 303 VLPMFSAKLRDYTQSLFDSSHIKIRTNTALKKVTAENIH----VEVKNPDGSKQEEVIPY 358

Query: 363 DLVLWTVG------SKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDS 416
            L++W  G      +K L+   E  NNR        RG    DE L +KG+  IFALGD 
Sbjct: 359 GLLVWAGGNRARPLTKKLMEGSEEQNNR--------RGLV-VDEYLKLKGYKDIFALGDC 409

Query: 417 SALRDSSGRPLPATAQVAFQQADFAG--WNLWAAIN------DRPL-------------- 454
           +    ++  P   TAQVA QQ  + G  +N   ++N      DR +              
Sbjct: 410 T---HTAYAP---TAQVASQQGAYLGQLFNKLGSLNFEKPSEDRHIALGDEMDSSTLISL 463

Query: 455 -----------LPFRFQNLGEMMILGRNDAAVS---PSFVEGVTLDGPIGHSARKLAYLI 500
                      LPF++ + G +  +G   A      P F + +   G +     +  YL 
Sbjct: 464 ANEKHASTKVFLPFKYSHQGSLAYVGHEKAIADIEVPWFGKQLHASGALAFYFWRSVYLS 523

Query: 501 RLPTDEHRLKVGVSWL 516
            L +  +R  V + W+
Sbjct: 524 ELYSLRNRTNVTLDWI 539


>sp|Q55CD9|NDH_DICDI Probable NADH dehydrogenase OS=Dictyostelium discoideum
           GN=DDB_G0270104 PE=3 SV=2
          Length = 451

 Score = 64.3 bits (155), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 97/455 (21%), Positives = 177/455 (38%), Gaps = 75/455 (16%)

Query: 81  RICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIA 140
           ++ ILG G+G       L S+      K  + ++     F+F P+L     G ++   IA
Sbjct: 41  KLIILGCGWGSYSFLKNLNSI------KYDITVISPRNHFLFTPLLTSSAVGTLEFRSIA 94

Query: 141 PRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLG 200
                       ++ +  V  + P ++       +     T   E    ++YD LV+ +G
Sbjct: 95  EPVRTTRDINEFKYIQASVTSINPENN-------SVLVKSTFHNEKPFEMKYDKLVIGVG 147

Query: 201 AEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSE-LERRNF------GKDSLIRVAVVGCG 253
           +      + G  E A     L  A  + +K+ E  ER +        ++ L+   +VG G
Sbjct: 148 SRNNTFGIKGVEENANFLKELHHAREIRQKIIECFERASLPDVSTEERERLLSFVIVGGG 207

Query: 254 YSGVELAATVSERLEEK-----GIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLG 308
            +G+E  + +++   E        V    V+  +         EA+ K+LS    +LV  
Sbjct: 208 ATGIEFTSELNDFFSEDLSRLFPFVPVNEVKIILL--------EASGKILSTFDQKLVKK 259

Query: 309 YFVRCIRRVG---EFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLV 365
             +   R  G      +SVK+     + +     N D+                    L+
Sbjct: 260 ALIN-FRNSGIDVRTHSSVKE----VLKDYVILDNGDR----------------IPYGLL 298

Query: 366 LWT--VGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSS 423
           +W+  +G  PL+ +             ++  +   D+ L VK +  +F+ GD + + +  
Sbjct: 299 VWSTGIGQHPLVKN--------SSFEKDSHDRIIVDDHLRVKNYSNVFSFGDCANVEN-- 348

Query: 424 GRPLPATAQVAFQQADFAG--WNLWAAINDRPLLPFRFQNLGEMMILGRNDAAVSPSFVE 481
            +  P TAQVA Q A +    +N    +N  P  PF F+ LG +   G+    +   F +
Sbjct: 349 -KNYPPTAQVASQSAVYLAKEFNNLEKLNPNPPKPFAFKFLGLLAYTGKKSGILQTDFFD 407

Query: 482 GVTLDGPIGHSARKLAYLIRLPTDEHRLKVGVSWL 516
              L G IG    + AYL RL +   +++V   W+
Sbjct: 408 ---LSGFIGFITWRSAYLTRLGSLRSKIQVPFDWM 439


>sp|O43090|NDH2_SCHPO Probable NADH-ubiquinone oxidoreductase C947.15c, mitochondrial
           OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
           GN=SPBC947.15c PE=3 SV=1
          Length = 551

 Score = 62.0 bits (149), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 111/496 (22%), Positives = 182/496 (36%), Gaps = 104/496 (20%)

Query: 79  KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWE 138
           K  I +LG G+G +     L+  ++       + LV   + F+F PML     G +    
Sbjct: 90  KKNIVVLGSGWGAVAAIKNLDPSLYN------ITLVSPRDHFLFTPMLPSCTVGTLRLPS 143

Query: 139 IAPRFADLLANTGVQFFKDRVKLLCPSD-------HLGVNGPMACTHGGTVLLESG-LIV 190
           I            V  FK ++    PS+        +  +       G T   E    ++
Sbjct: 144 ITEPI--------VALFKGKID---PSNIHQAECTAIDTSAKKVTIRGTTEANEGKEAVI 192

Query: 191 EYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSE-LERRNFGKD------- 242
            YD LV ++GA  +   + G  +         DA +V  ++ E LE+  F KD       
Sbjct: 193 PYDTLVFAIGAGNQTFGIQGVRDHGCFLKEAGDAKKVFNRIFEILEQVRFNKDLSPEERA 252

Query: 243 SLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT---GTPGNREAALKVLS 299
            L+ + VVG G +G+E AA + + ++         ++  I  T     PG      K L 
Sbjct: 253 RLLHITVVGGGPTGMEFAAEMQDFIDNDVKDMFPELQKDIHVTLIEAAPGVLPMFTKSLI 312

Query: 300 ARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQI 359
                L     ++ + +                  +  D N    I++          Q 
Sbjct: 313 TYTENLFKNLNIKIMTK-----------------TVVKDVNEKNLIVQKTNPDGSKAMQE 355

Query: 360 FEADLVLWTVG--SKPLLPHVEPPNNRLHDLPLN--ARGQAETDETLCVKGHPRIFALGD 415
               +++W  G  ++PL          +  +P    AR     DE   VKG P ++A+GD
Sbjct: 356 IPYGMLVWAAGITARPLT------RTLMSSIPEQSGARKGLIVDEFFRVKGVPEMYAVGD 409

Query: 416 SSALRDSSGRPLPATAQVAFQQADFAGWNLWA-----AINDR------------------ 452
            +     SG  LPATAQVA QQ  +   NL       A+++R                  
Sbjct: 410 CAF----SG--LPATAQVANQQGAWLAKNLNVEGKKFALHERIQALEKQLGEKEAPSQVA 463

Query: 453 ---------PLLPFRFQNLGEMMILGRNDAAVS---PSFVEGVTLDGPIGHSARKLAYLI 500
                     L PF++ + G +  +G   A      P   + + L G +GH+  +LAYL 
Sbjct: 464 GLKQQVEQLKLEPFKYHHQGALAYVGDEKAIADLKLPFMKKMLPLQGIVGHTFWRLAYLN 523

Query: 501 RLPTDEHRLKVGVSWL 516
            L +   +  V + WL
Sbjct: 524 ELISARSQFMVLIDWL 539


>sp|O32117|YUTJ_BACSU NADH dehydrogenase-like protein YutJ OS=Bacillus subtilis (strain
           168) GN=yutJ PE=3 SV=2
          Length = 355

 Score = 60.5 bits (145), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 86/368 (23%), Positives = 138/368 (37%), Gaps = 90/368 (24%)

Query: 81  RICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIA 140
           ++ ++GGG+G +    RL      DD    + L+D++     K   Y L +G +    I 
Sbjct: 3   KLVLIGGGYGNMRVLHRLLPNQLPDDVS--ITLIDRNPYHCLKTEYYALAAGTISDHHIR 60

Query: 141 ---PRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVL 197
              P    L    G     D V+                     VL +    + YD  ++
Sbjct: 61  VSFPEHPRLDVQYGDITSIDIVQ-------------------KQVLFQDREPISYDDAII 101

Query: 198 SLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGV 257
            LG E K   VPGA EF +   T++ +    +KL+ L            VA+VG G SGV
Sbjct: 102 GLGCEDKYHNVPGAPEFTYSIQTIDQSRETYQKLNNLSAN-------ATVAIVGAGLSGV 154

Query: 258 ELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYF----VRC 313
           ELA+ + E  ++  I+               GN    L     R  + V  +F    VR 
Sbjct: 155 ELASELRESRDDLNII-----------LFDRGN--LILSSFPERLSKYVQKWFEEHGVRI 201

Query: 314 IRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKP 373
           I R     A++ + E G + N                           AD ++WT G + 
Sbjct: 202 INR-----ANITKVEEGVVYN---------------------HDDPISADAIVWTAGIQ- 234

Query: 374 LLPHVEPPNNRLHDLPL--NARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATA 431
                  PN  + DL +  +A+G+        + G   ++ +GD ++L      P   +A
Sbjct: 235 -------PNKVVRDLDVEKDAQGRIVLTPHHNLPGDEHLYVVGDCASL------PHAPSA 281

Query: 432 QVAFQQAD 439
           Q+A  QA+
Sbjct: 282 QLAEAQAE 289


>sp|P32340|NDI1_YEAST Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial
           OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
           GN=NDI1 PE=1 SV=1
          Length = 513

 Score = 57.0 bits (136), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 113/491 (23%), Positives = 189/491 (38%), Gaps = 96/491 (19%)

Query: 79  KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWE 138
           KP + ILG G+G +        L   D KK  V ++     F+F P+L     G VD   
Sbjct: 53  KPNVLILGSGWGAI------SFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKS 106

Query: 139 IAPRFAD--LLANTGVQFFK--------DR-----------VKLLCPSDHLGVNGPMACT 177
           I     +  L     V +++        DR            +L  P +HLG++      
Sbjct: 107 IIEPIVNFALKKKGNVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAE 166

Query: 178 HGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKL-SELER 236
                       ++YD+L+ ++GAEP    +PG  ++      + ++  + R   + LE+
Sbjct: 167 ------------IKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEK 214

Query: 237 RNF------GKDSLIRVAVVGCGYSGVELAATVSERLEE--KGIVQAINVETTI-CPTGT 287
            N        +  L+ + VVG G +GVE A  + + + +  +  + A+  E  I      
Sbjct: 215 ANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEAL 274

Query: 288 PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILE 347
           P       K LS+     +    ++   R    +   KQ        +A  K+ D  I E
Sbjct: 275 PIVLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQL-------LAKTKHEDGKITE 327

Query: 348 LQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGH 407
                     +      ++W  G+K   P +     ++ +   + RG A  D  L VKG 
Sbjct: 328 ----------ETIPYGTLIWATGNKA-RPVITDLFKKIPEQNSSKRGLAVND-FLQVKGS 375

Query: 408 PRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNL--WAAI---------------- 449
             IFA+GD++     +G  LP TAQVA Q+A++   N    A I                
Sbjct: 376 NNIFAIGDNAF----AG--LPPTAQVAHQEAEYLAKNFDKMAQIPNFQKNLSSRKDKIDL 429

Query: 450 --NDRPLLPFRFQNLGEMMILG--RNDAAVSPSFVEGVTLDGPIGHSARKLAYLIRLPTD 505
              +    PF++ +LG +  LG  R  A +        T  G +     ++ YL  + + 
Sbjct: 430 LFEENNFKPFKYNDLGALAYLGSERAIATIRSGKRTFYTGGGLMTFYLWRILYLSMILSA 489

Query: 506 EHRLKVGVSWL 516
             RLKV   W+
Sbjct: 490 RSRLKVFFDWI 500


>sp|Q8GWA1|NDA1_ARATH Alternative NAD(P)H dehydrogenase 1, mitochondrial OS=Arabidopsis
           thaliana GN=NDA1 PE=2 SV=1
          Length = 510

 Score = 54.3 bits (129), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 15/146 (10%)

Query: 387 DLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRP-LPATAQVAFQQADF----- 440
           D P +  G+   DE + V     +FA+GD S   +S+G+  LPA AQVA ++  +     
Sbjct: 354 DFPKDPGGRIGIDEWMRVPSVQDVFAIGDCSGYLESTGKSTLPALAQVAEREGKYLANLF 413

Query: 441 -----AGWNLWAAINDRPL-LPFRFQNLGEMMILGRNDAAV---SPSFVEGVTLDGPIGH 491
                AG     +  +  L  PF +++LG M  +GR  A V        +G+++ G +  
Sbjct: 414 NVMGKAGGGRANSAKEMELGEPFVYKHLGSMATIGRYKALVDLRESKEGKGISMAGFLSW 473

Query: 492 SARKLAYLIRLPTDEHRLKVGVSWLT 517
              + AYL R+ +  +R  V ++WLT
Sbjct: 474 FIWRSAYLTRVVSWRNRFYVAINWLT 499



 Score = 37.7 bits (86), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 63/161 (39%), Gaps = 18/161 (11%)

Query: 78  KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAW 137
           +KPR+ +LG G+ G      +++ ++       V+ V      VF P+L     G ++  
Sbjct: 72  EKPRVLVLGSGWAGCRVLKGIDTSIYD------VVCVSPRNHMVFTPLLASTCVGTLEFR 125

Query: 138 EIAPRFADLL----ANTGVQFFKDRVKLLCPSDHLGVNGPMAC---THGGTVLLESGLIV 190
            +A   + +        G  +F      L   +H      + C   T G + L      +
Sbjct: 126 SVAEPISRIQPAISREPGSYYFLANCSKLDADNH-----EVHCETVTEGSSTLKPWKFKI 180

Query: 191 EYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKL 231
            YD LVL+ GAE     + G  E A     +  A  + RKL
Sbjct: 181 AYDKLVLACGAEASTFGINGVLENAIFLREVHHAQEIRRKL 221


>sp|Q54NS8|AIFB_DICDI Apoptosis-inducing factor homolog B OS=Dictyostelium discoideum
           GN=aifB PE=3 SV=1
          Length = 387

 Score = 52.0 bits (123), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 86/358 (24%), Positives = 144/358 (40%), Gaps = 85/358 (23%)

Query: 78  KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAW 137
           +K R+ I+GGG+GG   A +L       D K  V +V++ + F           G V A 
Sbjct: 4   EKKRVLIIGGGYGGCEVAKQL-------DSKFNVTVVERKQTFFHS-------VGSVRAV 49

Query: 138 EIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVL--------LESGLI 189
            + P                  K+  P D L  NG       GTV+        LE G  
Sbjct: 50  -VEPELVK--------------KIYIPYDKLLKNGKFIF---GTVIEISPTLAKLEDGQE 91

Query: 190 VEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELER--RNFGKD--SLI 245
           + +D+LV++ G+          A F  P           +  SE+    +NF +      
Sbjct: 92  LTFDYLVIATGSN-------SLAPFKAPLE--------KKSSSEILNYFQNFSQQIKQAK 136

Query: 246 RVAVVGCGYSGVELAATVSER--LEEKGIVQAINV----ETTICPTGTPGNREAALKVLS 299
            + +VG G    EL + + E+  +++  +V+ I +       + P           K + 
Sbjct: 137 SILIVGGGAVACELVSEIVEKYPVKDSELVKKITIVHSGSKLVNPKMNDKFTNVVSKAMK 196

Query: 300 ARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQI 359
            R V+++L      I    E +A++    S   PNI    +S  Y  E     KG+  Q 
Sbjct: 197 KRNVEVILN---DRITMPDEIKANLLNQTS---PNIQI--SSQNYTTE-----KGVPIQ- 242

Query: 360 FEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSS 417
             ADL++WTVG K    + E   +   ++ +N  GQ + + +  V+G+  +FA+GD +
Sbjct: 243 --ADLIIWTVGIK---TNSESYQSHFSNV-INESGQLKVNLSCQVQGYNNVFAIGDCT 294


>sp|Q58065|NAOX_METJA Putative NADH oxidase OS=Methanocaldococcus jannaschii (strain ATCC
           43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
           GN=MJ0649 PE=3 SV=2
          Length = 448

 Score = 49.3 bits (116), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 82/411 (19%), Positives = 167/411 (40%), Gaps = 76/411 (18%)

Query: 81  RICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM-LYELLSGEVDAWEI 139
           R  I+G G  GL TA    S + + +K  +++++ + +   + P  +  ++ G + +   
Sbjct: 2   RAIIIGSGAAGLTTA----STIRKYNKDMEIVVITKEKEIAYSPCAIPYVIEGAIKS--- 54

Query: 140 APRFADLLANTGVQFFKDR-VKLLCPSDHLGV---NGPMACTHGGTVLLESGLIVEYDWL 195
              F D++ +T   + ++R + +L  +  + V   N  + C        E    + YD+L
Sbjct: 55  ---FDDIIMHTPEDYKRERNIDILTETTVIDVDSKNNKIKCVDKDGNEFE----MNYDYL 107

Query: 196 VLSLGAEPKLDVVPGA-AEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGY 254
           VL+ GAEP +  + G   +  F   T+ED   + + + E        +   +VAVVG G 
Sbjct: 108 VLATGAEPFIPPIEGKDLDGVFKVRTIEDGRAILKYIEE--------NGCKKVAVVGAGA 159

Query: 255 SGVELAATVSERLEEKGI-VQAINVETTICPTG-TPGNREAALKVLSARKVQLVLGYFVR 312
            G+E+A      L+ +G+ V  + +   + P    P   E   K L    ++++L   + 
Sbjct: 160 IGLEMAYG----LKCRGLDVLVVEMAPQVLPRFLDPDMAEIVQKYLEKEGIKVMLSKPLE 215

Query: 313 CIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSK 372
            I                    +  +K    Y+          + ++++ D+V+   G +
Sbjct: 216 KI--------------------VGKEKVEAVYV----------DGKLYDVDMVIMATGVR 245

Query: 373 PLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRD--SSGRPLPAT 430
           P +   +    ++    +    + +T         P I+A+GD   + D  +  + L   
Sbjct: 246 PNIELAKKAGCKIGKFAIEVNEKMQTS-------IPNIYAVGDCVEVIDFITGEKTLSPF 298

Query: 431 AQVAFQQADFAGWNLWAAINDR--PLLPFRFQNLGEMMILGRNDAAVSPSF 479
              A +Q   AG N+ A +  +  P+L      +G++ I G    A S + 
Sbjct: 299 GTAAVRQGKVAGKNI-AGVEAKFYPVLNSAVSKIGDLEIGGTGLTAFSANL 348


>sp|Q9SKT7|NDB4_ARATH NAD(P)H dehydrogenase B4, mitochondrial OS=Arabidopsis thaliana
           GN=NDB4 PE=1 SV=1
          Length = 582

 Score = 48.5 bits (114), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 11/151 (7%)

Query: 78  KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAW 137
           +K ++ +LG G+ G         L + ++    V +V     F+F P+L  + +G V+A 
Sbjct: 62  RKKKVVVLGSGWSGY------SFLSYLNNPNYDVQVVSPRNFFLFTPLLPSVTNGTVEAR 115

Query: 138 EIAPRFADLLANTGVQFFK-DRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLV 196
            I      L+   G ++ + + VK+   +  +        +  GT   +    ++YD L+
Sbjct: 116 SIVEPIRGLMRKKGFEYKEAECVKIDASNKKIHCRSKEGSSLKGTTEFD----MDYDILI 171

Query: 197 LSLGAEPKLDVVPGAAEFAFPFSTLEDACRV 227
           L++GA+P     PG  E A+     EDA  +
Sbjct: 172 LAVGAKPNTFNTPGVEEHAYFLKEAEDALNI 202


>sp|P16640|CAMA_PSEPU Putidaredoxin reductase OS=Pseudomonas putida GN=camA PE=1 SV=1
          Length = 422

 Score = 45.8 bits (107), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 80/187 (42%), Gaps = 32/187 (17%)

Query: 82  ICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK--PMLYELLSGEVDAWEI 139
           + I+G G  G+  A  L +  W+ +    + LV  +        P+    L+G+  A  +
Sbjct: 7   VVIVGTGLAGVEVAFGLRASGWEGN----IRLVGDATVIPHHLPPLSKAYLAGKATAESL 62

Query: 140 APRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSL 199
             R  D  A   +Q       LL  +    +N          V+L  G  ++YD LVL+ 
Sbjct: 63  YLRTPDAYAAQNIQ-------LLGGTQVTAINRDRQ-----QVILSDGRALDYDRLVLAT 110

Query: 200 GAEPK-LDVVPGAAEFAFPF---STLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYS 255
           G  P+ L V  GA   A  F    TLEDA        E  RR    D+  R+ V+G GY 
Sbjct: 111 GGRPRPLPVASGAVGKANNFRYLRTLEDA--------ECIRRQLIADN--RLVVIGGGYI 160

Query: 256 GVELAAT 262
           G+E+AAT
Sbjct: 161 GLEVAAT 167


>sp|Q94BV7|NDB2_ARATH NAD(P)H dehydrogenase B2, mitochondrial OS=Arabidopsis thaliana
           GN=NDB2 PE=1 SV=1
          Length = 582

 Score = 44.7 bits (104), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 88/415 (21%), Positives = 169/415 (40%), Gaps = 75/415 (18%)

Query: 44  FISFAASNSS-GRNGDLVVTSEDESASQTYTWPDKKKPRICILGGGFGGLYTALRLESLV 102
            I+++ +N+S G NG  VV +              KK ++ +LG G+ G      L    
Sbjct: 34  LIAYSEANASYGANGGAVVET------------GTKKKKVVLLGTGWAGTSFLKNL---- 77

Query: 103 WQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADL-LANTGVQFFKDRVKL 161
             ++ + +V ++     F F P+L  +  G V+A  +     ++   N    + +     
Sbjct: 78  --NNSQYEVQIISPRNYFAFTPLLPSVTCGTVEARSVVEPIRNIGRKNVDTSYLEAECFK 135

Query: 162 LCP-SDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFST 220
           + P S  +        +  G    +    V+YD+LV++ GA+     +PG  E       
Sbjct: 136 IDPASKKVYCRSKQGLSSNG----KKEFSVDYDYLVIATGAQSNTFNIPGVEENCHFLKE 191

Query: 221 LEDACRVDR------------KLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLE 268
           +EDA R+ +            +LS+ ER+      ++   VVG G +GVE AA + + + 
Sbjct: 192 VEDAQRIRKTVIDSFEKASLPELSDEERKR-----ILHFVVVGGGPTGVEFAAELHDFVT 246

Query: 269 EKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPE 328
           E  +        ++ P       + ++++        +L  F    +R+ EF A  K   
Sbjct: 247 EDLV--------SLYPRA-----KGSVRITLLEAADHILTMF---DKRITEF-AEEKFSR 289

Query: 329 SGAIPNIAA--DKNSDKYILELQPAIKGLESQIFEADLVLWT--VGSKPLLPHVEPPNNR 384
            G    + +   K ++K   ++    KG E       +++W+  +G++P++       + 
Sbjct: 290 DGIDVKLGSMVTKVNEK---DISAKTKGGEVSSIPYGMIVWSTGIGTRPVI------KDF 340

Query: 385 LHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQAD 439
           +  +    R    TDE L V+G   I+ALGD + +     R +       F +AD
Sbjct: 341 MKQIGQGNRRALATDEWLRVEGTDNIYALGDCATINQ---RKVMEDVSAIFSKAD 392


>sp|Q5XC60|NAOX_STRP6 Probable NADH oxidase OS=Streptococcus pyogenes serotype M6 (strain
           ATCC BAA-946 / MGAS10394) GN=M6_Spy0868 PE=1 SV=1
          Length = 456

 Score = 44.7 bits (104), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 101/245 (41%), Gaps = 57/245 (23%)

Query: 192 YDWLVLSLGAEPKLDVVPGA--AEFAFPF-STLEDACRVD------RKLSELERRNFGKD 242
           YD L+ + G++P L  + GA   E +  F +TLE+   V         +++LE ++    
Sbjct: 104 YDKLIFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSADVIAKLENKD---- 159

Query: 243 SLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAAL--KVLSA 300
            + RVAVVG GY GVELA     + +E  ++  ++     C  G        L  K +  
Sbjct: 160 -IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDT----CLAGYYDRDLTDLMAKNMEE 214

Query: 301 RKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIF 360
             +QL  G  V+ +              +G +  I  DKN                   +
Sbjct: 215 HGIQLAFGETVKEV------------AGNGKVEKIITDKNE------------------Y 244

Query: 361 EADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALR 420
           + D+V+  VG +   P+    N ++ DL  N        +   +   P ++A+GD + + 
Sbjct: 245 DVDMVILAVGFR---PNTTLGNGKI-DLFRNGAFLVNKRQETSI---PGVYAIGDCATIY 297

Query: 421 DSSGR 425
           D++ R
Sbjct: 298 DNATR 302


>sp|Q9BRQ8|AIFM2_HUMAN Apoptosis-inducing factor 2 OS=Homo sapiens GN=AIFM2 PE=1 SV=1
          Length = 373

 Score = 44.3 bits (103), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 6/83 (7%)

Query: 390 LNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAI 449
           L + G    +E L V+GH  ++A+GD + +R       P  A +A   A+ A  N+  ++
Sbjct: 260 LASSGALRVNEHLQVEGHSNVYAIGDCADVRT------PKMAYLAGLHANIAVANIVNSV 313

Query: 450 NDRPLLPFRFQNLGEMMILGRND 472
             RPL  ++   L  ++ +GRND
Sbjct: 314 KQRPLQAYKPGALTFLLSMGRND 336


>sp|P33009|TERPA_PSESP Terpredoxin reductase OS=Pseudomonas sp. GN=terPA PE=4 SV=1
          Length = 409

 Score = 43.5 bits (101), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 107/276 (38%), Gaps = 66/276 (23%)

Query: 192 YDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVG 251
           YD L+L+ G+ P+     G A+     S  +DA R+ ++L E            R+ V+G
Sbjct: 102 YDHLILATGSHPRFMATLGQADNLCYLSDWDDAGRIRQQLGEAS----------RIVVLG 151

Query: 252 CGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFV 311
            G+ G+E+A++  +  +   ++                  E A ++LS R V      F+
Sbjct: 152 GGFIGLEIASSACKMGKHVTVI------------------ERAPRLLS-RVVSEAFATFI 192

Query: 312 RCIR-------RVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADL 364
             I        R+GE    V++  SG           D   L         + Q+ E D+
Sbjct: 193 GDIHLGNGIELRLGEEVREVRRCTSGV--------RVDAVFLS--------DGQLLECDM 236

Query: 365 VLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSG 424
           ++  VGS+P +              L        DE  C    P I A+GD  A+  S G
Sbjct: 237 LVIGVGSEPRMELATAAG-------LACASGVLVDEH-CHTSDPFISAIGDCVAVCPSPG 288

Query: 425 RPLP--ATAQVAFQQADFAGWNLWAAINDRPLLPFR 458
             LP   + Q A +QA        A ++ RP+ P +
Sbjct: 289 HQLPRRESVQNATEQARLVA----ARLSGRPVPPVQ 320


>sp|A5PJM4|AIFM2_BOVIN Apoptosis-inducing factor 2 OS=Bos taurus GN=AIFM2 PE=2 SV=1
          Length = 373

 Score = 43.5 bits (101), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 6/83 (7%)

Query: 390 LNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAI 449
           L + G    +E L V+G+  I+A+GD + +R+      P  A  A   A+ A  N+  ++
Sbjct: 260 LASNGALRVNEYLQVEGYSHIYAIGDCADVRE------PKMAYHASLHANVAVANIVNSM 313

Query: 450 NDRPLLPFRFQNLGEMMILGRND 472
             RPL  ++  +L  ++ +GRND
Sbjct: 314 KQRPLKTYKPGSLTFLLAMGRND 336


>sp|F4JJJ3|NDB3_ARATH NAD(P)H dehydrogenase B3, mitochondrial OS=Arabidopsis thaliana
           GN=NDB3 PE=2 SV=1
          Length = 580

 Score = 43.1 bits (100), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 99/414 (23%), Positives = 170/414 (41%), Gaps = 86/414 (20%)

Query: 57  GDLVVTSE-DESASQTYTWPDKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVD 115
           G L+V SE + S S        +K ++ +LG G+ G   A  L++L   ++   +V ++ 
Sbjct: 32  GGLIVYSEANPSYSNNGVETKTRKRKVVLLGTGWAG---ASFLKTL---NNSSYEVQVIS 85

Query: 116 QSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQF-------FK---DRVKLLCPS 165
               F F P+L  +  G V+A  +     ++     V+        FK      K+ C S
Sbjct: 86  PRNYFAFTPLLPSVTCGTVEARSVVEPIRNIARKQNVEMSFLEAECFKIDPGSKKVYCRS 145

Query: 166 DHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDAC 225
              GVN             +    V+YD+LV++ GA+     +PG  E       +EDA 
Sbjct: 146 KQ-GVNSKG----------KKEFDVDYDYLVIATGAQSNTFNIPGVEENCHFLKEVEDAQ 194

Query: 226 RVDRK------------LSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEE---K 270
           R+               L+E ER+      ++   VVG G +GVE A+ + + + E   K
Sbjct: 195 RIRSTVIDSFEKASLPGLNEQERKR-----MLHFVVVGGGPTGVEFASELHDFVNEDLVK 249

Query: 271 GIVQAIN-VETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPES 329
              +A N V+ T+         EAA  +L+               +R+ EF A  K    
Sbjct: 250 LYPKAKNLVQITLL--------EAADHILTMFD------------KRITEF-AEEKFTRD 288

Query: 330 GAIPNIAAD--KNSDKYILELQPAIKGLESQIFEADLVLWT--VGSKPLLPHVEPPNNRL 385
           G    + +   K +DK   E+    K  E       +++W+  +G++P++       + +
Sbjct: 289 GIDVKLGSMVVKVNDK---EISAKTKAGEVSTIPYGMIVWSTGIGTRPVI------KDFM 339

Query: 386 HDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQAD 439
             +    R    TDE L V+G   I+ALGD + +   + R +       F++AD
Sbjct: 340 KQIGQGNRRALATDEWLRVEGCDNIYALGDCATI---NQRKVMEDIAAIFKKAD 390


>sp|P75389|NAOX_MYCPN Probable NADH oxidase OS=Mycoplasma pneumoniae (strain ATCC 29342 /
           M129) GN=nox PE=3 SV=1
          Length = 479

 Score = 43.1 bits (100), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 53/248 (21%)

Query: 191 EYDWLVLSLGAEPK-LDVVPGAAEFAFPFSTLEDACRVDRKL--SELERR------NFGK 241
            YD LV++ GA P  ++V          F+  +  C   + L   +L +       +F  
Sbjct: 104 HYDQLVVASGAWPICMNVENEVTHTQLQFNHTDKYCGNIKNLISCKLYQHALTLIDSFRH 163

Query: 242 DSLIR-VAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSA 300
           D  I+ VA+VG GY G+ELA    +  ++  ++  ++      P G   + E   ++  A
Sbjct: 164 DKSIKSVAIVGSGYIGLELAEAAWQCGKQVTVIDMLD-----KPAGNNFDEEFTNELEKA 218

Query: 301 RK---VQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLES 357
            K   + L++G  V+                 G I  + ADKN           +KG+E+
Sbjct: 219 MKKAGINLMMGSAVK-----------------GFI--VDADKN----------VVKGVET 249

Query: 358 QI--FEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGD 415
                +ADLV+ ++G +P    V  P +R      N  G  + +E L    H  ++ +G 
Sbjct: 250 DKGRVDADLVIQSIGFRPNTQFV--PKDR--QFEFNRNGSIKVNEYLQALNHENVYVIGG 305

Query: 416 SSALRDSS 423
           ++A+ D++
Sbjct: 306 AAAIYDAA 313


>sp|Q6C5H4|GSHR_YARLI Glutathione reductase OS=Yarrowia lipolytica (strain CLIB 122 / E
           150) GN=GLR1 PE=3 SV=1
          Length = 470

 Score = 42.0 bits (97), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 85/224 (37%), Gaps = 55/224 (24%)

Query: 195 LVLSLGAEPKLDVVPGAAEFAFP---FSTLEDACRVDRKLSELERRNFGKDSLIRVAVVG 251
           ++++ G +P+L  VPGA E+      F  LE   +                   RVAVVG
Sbjct: 150 IMIATGGKPRLPDVPGA-EYGIDSDGFFALETQPK-------------------RVAVVG 189

Query: 252 CGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFV 311
            GY GVELA          G+   +N ETT+   G     +  L+         +  Y+V
Sbjct: 190 GGYIGVELA----------GVFHGLNSETTLFCRG-----QTVLRAFDIMIQDTITDYYV 234

Query: 312 RCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGS 371
           +           +   +   +  I    N +  +   Q    G E  I   D ++WT+G 
Sbjct: 235 K---------EGINVLKGSGVKKIVKKDNGELLVTYEQ---DGAEKDI-TLDSLIWTIGR 281

Query: 372 KPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGD 415
           +PL   +   N     +  N RG  E DE         I++LGD
Sbjct: 282 EPLKDTL---NLGEFGIKTNKRGYIEVDE-YQRSSVDNIYSLGD 321


>sp|B5FXE5|AIFM2_TAEGU Apoptosis-inducing factor 2 OS=Taeniopygia guttata GN=AIFM2 PE=2
           SV=1
          Length = 373

 Score = 42.0 bits (97), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 65/301 (21%), Positives = 124/301 (41%), Gaps = 64/301 (21%)

Query: 182 VLLESGLIVEYDWLVLSLGAEPKLDVVPG----AAEFAFPFSTLEDACRVDRKLSELERR 237
           V+L  G  + Y  L+L+ G++      PG      +      T ED  +      E+E+ 
Sbjct: 91  VVLSDGEELHYSHLILATGSDGPF---PGKFNQVIDMESAIQTYEDMVK------EIEKS 141

Query: 238 NFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTG-TPGNREAALK 296
                   R+ VVG G +GVE+AA +      K I+  I+ +T +      P  R+   +
Sbjct: 142 Q-------RILVVGGGAAGVEMAAEIKTEYPGKEII-LIHSKTALADVELLPSVRQVVKE 193

Query: 297 VLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLE 356
           +L  + V+L+L        +V + E            N+  ++     ++  +   KG E
Sbjct: 194 ILLRKGVRLLLS------EKVSDIE------------NLRPNQFQKDMVVRTE---KGTE 232

Query: 357 SQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNAR----GQAETDETLCVKGHPRIFA 412
             +   D+V+   G K         N+  +      +    G  + ++ L ++G+  I+A
Sbjct: 233 VVV---DMVVLCTGIK--------INSSAYAAAFGDKMASDGALKVNKHLQLEGYENIYA 281

Query: 413 LGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMILGRND 472
           +GD + L++      P  A  A   A+    N+  ++  +PL  +   +L  ++ +GRND
Sbjct: 282 IGDCADLKE------PKMAYHAGLHANVVVTNIINSLTQKPLKTYEPGSLTFLLSMGRND 335

Query: 473 A 473
            
Sbjct: 336 G 336


>sp|Q7N4V5|HCAD_PHOLL 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin--NAD(+)
           reductase component OS=Photorhabdus luminescens subsp.
           laumondii (strain TT01) GN=hcaD PE=3 SV=1
          Length = 394

 Score = 41.6 bits (96), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 17/88 (19%)

Query: 182 VLLESGLIVEYDWLVLSLGAE----PKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERR 237
           V+LE+G  + YD L+L++GA     P LD +    E  +   TL+DA R+        R+
Sbjct: 91  VVLENGGKLRYDKLLLTMGARARRFPLLDQL---GENIYTLRTLDDAQRL--------RQ 139

Query: 238 NFGKDSLIRVAVVGCGYSGVELAATVSE 265
              KD   R+ +VG G  G+ELAAT  E
Sbjct: 140 AVKKDK--RILIVGGGVIGLELAATSCE 165


>sp|Q54NS9|AIFA_DICDI Apoptosis-inducing factor homolog A OS=Dictyostelium discoideum
           GN=aifA PE=3 SV=1
          Length = 408

 Score = 41.2 bits (95), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 141/365 (38%), Gaps = 99/365 (27%)

Query: 76  DKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVD 135
           D +K R+ I+G GFGG   A  L+S         +V +V++ + F F  +        + 
Sbjct: 24  DCEKKRVLIIGCGFGGSQVAKLLDS-------NFEVTVVERKQTF-FNSI------ASIR 69

Query: 136 AWEIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVL--------LESG 187
           A  + P  A               K+  P D L  NG       GTV+        LE G
Sbjct: 70  AI-VEPELAK--------------KIYIPYDKLLKNGKFIY---GTVIEISPTLVKLEDG 111

Query: 188 LIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKD----- 242
             + +D+LV++ G+          A F  P            K+S  E  N+ KD     
Sbjct: 112 KELTFDYLVIATGSN-------SLAPFKAPL----------EKISGTEIFNYYKDISEQI 154

Query: 243 -SLIRVAVVGCGYSGVELAATVSER--LEEKGIVQAINVETTICPTGTP------GNREA 293
                + +VG G  G E+   +  +  ++ K + + I    TI  +G         N+  
Sbjct: 155 KQAKSILIVGGGSVGCEVVGEIINKYPIKNKELAKKI----TIVHSGNKLVSSKTNNKFN 210

Query: 294 AL--KVLSARKVQLVLGYFVRCIRRVGEFEASVKQP-ESGAIPNIAADKNSDKYILELQP 350
            L  + +  R V ++L        R+ E    +KQ   +   PN           L+   
Sbjct: 211 NLINESMKKRNVSVILN------DRI-EIPDDIKQCFINQTSPNFQVS-------LKTYK 256

Query: 351 AIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRI 410
              GL     E+D V+WT+G K  L       N  +++  N  GQ + +++  V+G+  I
Sbjct: 257 TKNGLS---IESDFVIWTIGIK--LNSESYKTNFSNEI--NEIGQIKVNQSCQVQGYDNI 309

Query: 411 FALGD 415
           FA+GD
Sbjct: 310 FAIGD 314


>sp|Q96NN9|AIFM3_HUMAN Apoptosis-inducing factor 3 OS=Homo sapiens GN=AIFM3 PE=1 SV=1
          Length = 605

 Score = 40.8 bits (94), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 14/95 (14%)

Query: 182 VLLESGLIVEYDWLVLSLGAEPKLDVVPGA-AEFAFPFSTLEDACRVDRKLSELER-RNF 239
           V+ + G  +EY  L+L+ G+ PK     G   E  F   T EDA RV R    L R RN 
Sbjct: 280 VVFKDGFKLEYSKLLLAPGSSPKTLSCKGKEVENVFTIRTPEDANRVVR----LARGRN- 334

Query: 240 GKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQ 274
                  V VVG G+ G+E+AA ++E+     +V+
Sbjct: 335 -------VVVVGAGFLGMEVAAYLTEKAHSVSVVE 362


>sp|Q3TY86|AIFM3_MOUSE Apoptosis-inducing factor 3 OS=Mus musculus GN=Aifm3 PE=2 SV=1
          Length = 605

 Score = 40.4 bits (93), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 12/94 (12%)

Query: 182 VLLESGLIVEYDWLVLSLGAEPKLDVVPGA-AEFAFPFSTLEDACRVDRKLSELERRNFG 240
           V+ + G  +EY  L+L+ G+ PK     G   E  F   T EDA RV R    L R   G
Sbjct: 280 VVFKDGFKLEYSKLLLAPGSSPKTLTCKGKDVENVFTIRTPEDANRVLR----LAR---G 332

Query: 241 KDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQ 274
           ++++    VVG G+ G+E+AA ++E+     +V+
Sbjct: 333 RNAV----VVGAGFLGMEVAAYLTEKAHSVSVVE 362


>sp|A2RIB7|NAOX_LACLM NADH oxidase OS=Lactococcus lactis subsp. cremoris (strain MG1363)
           GN=noxE PE=1 SV=1
          Length = 446

 Score = 39.7 bits (91), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 9/83 (10%)

Query: 188 LIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTL-EDACRVDRKLSELERRNFGKDSLIR 246
           +I  YD LVL+ G+ P +  +PG       F  L ++   +D +        F K+ + R
Sbjct: 99  IIEAYDKLVLATGSRPIIPNLPGKDLKGIHFLKLFQEGQAIDAE--------FAKEKVKR 150

Query: 247 VAVVGCGYSGVELAATVSERLEE 269
           +AV+G GY G E+A     R +E
Sbjct: 151 IAVIGAGYIGTEIAEAAKRRGKE 173


>sp|P37062|NAPE_ENTFA NADH peroxidase OS=Enterococcus faecalis (strain ATCC 700802 /
           V583) GN=npr PE=1 SV=2
          Length = 447

 Score = 39.7 bits (91), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 114/277 (41%), Gaps = 71/277 (25%)

Query: 192 YDWLVLSLGAEP-KLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVV 250
           YD L++S GA P +LD+     +  +     + A ++ +K  + E  N        V V+
Sbjct: 104 YDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLKQKTVDPEVNN--------VVVI 155

Query: 251 GCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNRE---AALKVLSARKVQLVL 307
           G GY G+E A   ++  ++  ++  ++      P G   ++E      + + A  + +  
Sbjct: 156 GSGYIGIEAAEAFAKAGKKVTVIDILD-----RPLGVYLDKEFTDVLTEEMEANNITIAT 210

Query: 308 GYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLW 367
           G  V   R  G+          G +  I  DKN+                  ++ADLV+ 
Sbjct: 211 GETVE--RYEGD----------GRVQKIVTDKNA------------------YDADLVVV 240

Query: 368 TVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPL 427
            VG +P    ++        L L+  G  +TDE +     P +FA+GD++ ++ +     
Sbjct: 241 AVGVRPNTAWLKGT------LELHPNGLIKTDEYMRT-SEPDVFAVGDATLIKYN----- 288

Query: 428 PATAQV-------AFQQADFAGWNLWAAINDRPLLPF 457
           PA  +V       A +Q  FA  NL     + P+ PF
Sbjct: 289 PADTEVNIALATNARKQGRFAVKNL-----EEPVKPF 320


>sp|Q8BUE4|AIFM2_MOUSE Apoptosis-inducing factor 2 OS=Mus musculus GN=Aifm2 PE=2 SV=1
          Length = 373

 Score = 39.3 bits (90), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 6/83 (7%)

Query: 390 LNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAI 449
           L + G  + +E L V+G+  I+A+GD +  ++      P  A  A   A+ A  N+  ++
Sbjct: 260 LASNGALKVNEFLQVEGYSNIYAIGDCADTKE------PKMAYHAGLHANVAVANIVNSM 313

Query: 450 NDRPLLPFRFQNLGEMMILGRND 472
             RPL  ++   L  ++ +GRND
Sbjct: 314 KQRPLKAYKPGALTFLLSMGRND 336


>sp|Q1JPL4|NDB1_ARATH NAD(P)H dehydrogenase B1, mitochondrial OS=Arabidopsis thaliana
           GN=NDB1 PE=1 SV=1
          Length = 571

 Score = 39.3 bits (90), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 79/370 (21%), Positives = 141/370 (38%), Gaps = 85/370 (22%)

Query: 82  ICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAP 141
           + +LG G+ G+     L      D     V +V     F F P+L  +  G V+A  I  
Sbjct: 52  VVVLGTGWAGISFLKDL------DITSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIVE 105

Query: 142 RFADLLA--NTGVQFFK-DRVKLLCPSDHLGVNGPMAC--THGGTVLLESGLIVEYDWLV 196
              ++    N  ++ ++ D  K+    DH  VN  + C               + YD+L+
Sbjct: 106 SVRNITKKKNGEIELWEADCFKI----DH--VNQKVHCRPVFKDDPEASQEFSLGYDYLI 159

Query: 197 LSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDR------------KLSELERRNFGKDSL 244
           +++GA+      PG  E       +EDA R+ R             L+E +RR       
Sbjct: 160 VAVGAQVNTFGTPGVLENCHFLKEVEDAQRIRRGVIDCFEKAILPGLTEEQRRR-----K 214

Query: 245 IRVAVVGCGYSGVELAATVSERLEEK--GIVQAIN--VETTICPTGTPGNREAALKVLSA 300
           +   +VG G +GVE AA + + + E    I  ++   V+ T+  +G     +  L     
Sbjct: 215 LHFVIVGGGPTGVEFAAELHDFIIEDITKIYPSVKELVKITLIQSG-----DHILNTFDE 269

Query: 301 RKVQLVLGYFVRC---------IRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPA 351
           R        F R          +  V + + +VK   SG + +I                
Sbjct: 270 RISSFAEQKFTRDGIDVQTGMRVMSVTDKDITVKVKSSGELVSIP--------------- 314

Query: 352 IKGLESQIFEADLVLWT--VGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPR 409
                       L+LW+  VG++P++      ++ +  +    R    T+E L V G   
Sbjct: 315 ----------HGLILWSTGVGTRPVI------SDFMEQVGQGGRRAVATNEWLQVTGCEN 358

Query: 410 IFALGDSSAL 419
           ++A+GD +++
Sbjct: 359 VYAVGDCASI 368


>sp|Q54DK1|SQRD_DICDI Sulfide:quinone oxidoreductase, mitochondrial OS=Dictyostelium
           discoideum GN=sqrdl PE=3 SV=1
          Length = 452

 Score = 39.3 bits (90), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 95/408 (23%), Positives = 161/408 (39%), Gaps = 70/408 (17%)

Query: 67  SASQTYTWPDKKK----PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF 122
           SASQ  +  +K+K     +I I+GGG GGL  A +LE    +   K  +++V+ SE+  +
Sbjct: 28  SASQLGSEKEKRKLKNVTKIVIVGGGAGGLSVASQLEH---KFKNKGDIVIVEPSEKHYY 84

Query: 123 KPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTV 182
           +P L+ L+ G + + + + +        G  + KD V +  P +++             V
Sbjct: 85  QP-LWTLVGGGIFSRKDSEKDEKDFIPKGATWVKDSVTVFKPEENI-------------V 130

Query: 183 LLESGLIVEYDWLVLSLGAEPKLDVVPGAAE----FAFPFSTLEDACRVDRKLSELERRN 238
           L + G  ++YD+LV+S G E   D V G  E         +   D+C  ++    ++   
Sbjct: 131 LTKDGKEIDYDYLVVSTGLELYWDRVKGLKENLGKNGVTSNYSYDSC--EKTFEFIKSLK 188

Query: 239 FGKDSLIRVAVVG--CGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALK 296
            G  ++  V   G  CG +  ++     + L + GI   + ++             A   
Sbjct: 189 PGNVAIFTVPTTGVKCGGAPQKILWLCDDYLRKHGIRDKVRLDF----------NSAGAS 238

Query: 297 VLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLE 356
           +   +K   VL    +        E  V Q  +  +  I  D  S + + E     K ++
Sbjct: 239 MFPVKKYSEVLDKMAK--------ERGVNQNFAHNLVEIKGD--SKEAVFETPQGNKTVK 288

Query: 357 SQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDE-TLCVKGHPRIFALGD 415
             +             P+ PH    N+ L D    A G    D+ TL    +  +F+LGD
Sbjct: 289 YDMIHV--------VPPMGPHSVIKNSPLAD---PATGFVNVDKGTLQHVKYDNVFSLGD 337

Query: 416 SSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLG 463
           +S L      P   TA     QA     NL   IN +  LP   +  G
Sbjct: 338 TSNL------PTSKTAAAITSQAPILVGNL---INHKLGLPLNHKYDG 376


>sp|F2Z699|NDH2_YARLI External alternative NADH-ubiquinone oxidoreductase, mitochondrial
           OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=NDH2
           PE=1 SV=1
          Length = 582

 Score = 39.3 bits (90), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 75/175 (42%), Gaps = 14/175 (8%)

Query: 76  DKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVD 135
           D  K  + +LG G+G +    +L      D     V++V     F+F P+L    +G ++
Sbjct: 109 DPSKKTLVVLGSGWGSVSFLKKL------DTSNYNVIVVSPRNYFLFTPLLPSCPTGTIE 162

Query: 136 AWEIAPRFADLLANTGV--QFFK-DRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEY 192
              I      ++ +     Q+ + D  K+      + +   ++      V+ E    + +
Sbjct: 163 HRSIMEPIRGIIRHKQAECQYLEADATKIDHEKRIVTIRSAVSENSKEEVIKE----IPF 218

Query: 193 DWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSE-LERRNFGKDSLIR 246
           D+LV+ +GA      +PG  E A     + DA ++ R L + +E+  F KD  +R
Sbjct: 219 DYLVVGVGAMSSTFGIPGVQENACFLKEIPDAQQIRRTLMDCIEKAQFEKDPEVR 273


>sp|Q9GRX6|AIFM1_DICDI Apoptosis-inducing factor 1, mitochondrial OS=Dictyostelium
           discoideum GN=aif PE=2 SV=1
          Length = 532

 Score = 38.9 bits (89), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 10/92 (10%)

Query: 182 VLLESGLIVEYDWLVLSLGAEPK-LDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFG 240
           VLL  G ++ YD  +++ G EP+ L       +    + T+ED     RKL E+      
Sbjct: 198 VLLNDGKLIRYDKCLIATGGEPRQLKFTSTNDKKISTYRTVEDF----RKLYEVV----- 248

Query: 241 KDSLIRVAVVGCGYSGVELAATVSERLEEKGI 272
           KD    V V+G G+ G EL   ++   ++K I
Sbjct: 249 KDGGKHVTVLGGGFLGSELTCAINSNFQDKNI 280


>sp|P40215|NDH1_YEAST External NADH-ubiquinone oxidoreductase 1, mitochondrial
           OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
           GN=NDE1 PE=1 SV=1
          Length = 560

 Score = 38.1 bits (87), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 38/171 (22%), Positives = 77/171 (45%), Gaps = 16/171 (9%)

Query: 70  QTYTWPD-KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYE 128
           Q+ T+P+  K+  + ILG G+G +     L++ ++       V++V     F+F P+L  
Sbjct: 102 QSDTFPNGSKRKTLVILGSGWGSVSLLKNLDTTLYN------VVVVSPRNYFLFTPLLPS 155

Query: 129 LLSGEVDAWEIAP--RFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLES 186
              G ++   I    R     ++  V +++     + P +        A  +      + 
Sbjct: 156 TPVGTIELKSIVEPVRTIARRSHGEVHYYEAEAYDVDPENKTIKVKSSAKNN------DY 209

Query: 187 GLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRK-LSELER 236
            L ++YD+LV+ +GA+P     PG  E++     + DA  +  K +S +E+
Sbjct: 210 DLDLKYDYLVVGVGAQPNTFGTPGVYEYSSFLKEISDAQEIRLKIMSSIEK 260


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.319    0.135    0.402 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 200,271,351
Number of Sequences: 539616
Number of extensions: 8745380
Number of successful extensions: 19839
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 19657
Number of HSP's gapped (non-prelim): 151
length of query: 538
length of database: 191,569,459
effective HSP length: 122
effective length of query: 416
effective length of database: 125,736,307
effective search space: 52306303712
effective search space used: 52306303712
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)