Query 009310
Match_columns 538
No_of_seqs 402 out of 3748
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 23:36:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009310.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009310hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g6h_A Rotenone-insensitive NA 100.0 1.7E-60 5.7E-65 507.3 35.7 399 76-519 39-492 (502)
2 3hyw_A Sulfide-quinone reducta 100.0 3.4E-50 1.2E-54 421.4 34.3 382 79-518 2-415 (430)
3 3sx6_A Sulfide-quinone reducta 100.0 1E-44 3.5E-49 380.8 31.1 367 79-501 4-401 (437)
4 3h28_A Sulfide-quinone reducta 100.0 7.4E-43 2.5E-47 366.0 29.2 364 79-503 2-391 (430)
5 3klj_A NAD(FAD)-dependent dehy 100.0 3.8E-42 1.3E-46 354.5 24.8 309 77-472 7-321 (385)
6 3vrd_B FCCB subunit, flavocyto 100.0 5.6E-42 1.9E-46 356.2 23.7 321 79-465 2-339 (401)
7 4eqs_A Coenzyme A disulfide re 100.0 3.3E-41 1.1E-45 353.6 28.7 301 80-447 1-310 (437)
8 3ef6_A Toluene 1,2-dioxygenase 100.0 1.1E-41 3.7E-46 354.8 24.4 325 79-471 2-334 (410)
9 3lxd_A FAD-dependent pyridine 100.0 1.4E-40 4.7E-45 347.2 29.1 328 78-471 8-346 (415)
10 1xhc_A NADH oxidase /nitrite r 100.0 8.4E-41 2.9E-45 342.6 26.5 286 80-447 9-296 (367)
11 3fg2_P Putative rubredoxin red 100.0 8.3E-41 2.8E-45 347.6 26.0 326 79-470 1-334 (404)
12 3h8l_A NADH oxidase; membrane 100.0 3.6E-40 1.2E-44 343.4 24.4 310 80-460 2-347 (409)
13 2gqw_A Ferredoxin reductase; f 100.0 5.6E-40 1.9E-44 341.6 22.6 318 78-470 6-333 (408)
14 3ics_A Coenzyme A-disulfide re 100.0 4.5E-39 1.5E-43 350.5 28.0 328 47-447 12-352 (588)
15 1q1r_A Putidaredoxin reductase 100.0 3.8E-39 1.3E-43 337.6 24.0 318 78-462 3-333 (431)
16 3cgb_A Pyridine nucleotide-dis 100.0 3.7E-38 1.3E-42 334.8 29.8 329 47-447 12-352 (480)
17 3ntd_A FAD-dependent pyridine 100.0 2.7E-38 9.1E-43 343.0 28.2 324 80-447 2-337 (565)
18 2bc0_A NADH oxidase; flavoprot 100.0 7.9E-38 2.7E-42 333.1 27.8 305 78-447 34-360 (490)
19 3oc4_A Oxidoreductase, pyridin 100.0 4.3E-38 1.5E-42 331.9 25.3 301 80-447 3-313 (452)
20 3iwa_A FAD-dependent pyridine 100.0 2.3E-38 7.9E-43 335.9 23.3 306 79-447 3-328 (472)
21 3kd9_A Coenzyme A disulfide re 100.0 4.2E-38 1.4E-42 331.7 24.9 304 79-447 3-314 (449)
22 2cdu_A NADPH oxidase; flavoenz 100.0 6E-38 2.1E-42 330.8 25.9 301 80-447 1-316 (452)
23 1m6i_A Programmed cell death p 100.0 3.3E-38 1.1E-42 335.8 22.7 323 78-463 10-367 (493)
24 2v3a_A Rubredoxin reductase; a 100.0 1.3E-37 4.4E-42 321.4 26.3 297 79-447 4-305 (384)
25 1nhp_A NADH peroxidase; oxidor 100.0 1.2E-36 4E-41 320.5 29.1 303 80-447 1-315 (447)
26 1zk7_A HGII, reductase, mercur 100.0 2E-36 7E-41 320.5 28.1 288 78-447 3-333 (467)
27 3f8d_A Thioredoxin reductase ( 100.0 5.8E-37 2E-41 308.0 22.3 306 77-454 13-321 (323)
28 1ebd_A E3BD, dihydrolipoamide 100.0 4E-37 1.4E-41 324.8 22.2 292 79-447 3-332 (455)
29 1zmd_A Dihydrolipoyl dehydroge 100.0 4.6E-37 1.6E-41 326.1 22.7 297 78-447 5-344 (474)
30 2hqm_A GR, grase, glutathione 100.0 2.6E-36 8.9E-41 320.4 27.3 289 78-447 10-346 (479)
31 1dxl_A Dihydrolipoamide dehydr 100.0 6.7E-37 2.3E-41 324.6 22.2 297 78-447 5-341 (470)
32 2qae_A Lipoamide, dihydrolipoy 100.0 7.8E-37 2.7E-41 323.8 21.4 295 79-447 2-339 (468)
33 3fbs_A Oxidoreductase; structu 100.0 5.6E-37 1.9E-41 304.5 19.1 287 79-453 2-295 (297)
34 1xdi_A RV3303C-LPDA; reductase 100.0 7.6E-37 2.6E-41 326.3 21.4 294 79-447 2-341 (499)
35 1ges_A Glutathione reductase; 100.0 1.1E-36 3.9E-41 320.7 21.6 286 79-447 4-327 (450)
36 1v59_A Dihydrolipoamide dehydr 100.0 3.4E-36 1.2E-40 319.8 24.7 318 79-471 5-375 (478)
37 1mo9_A ORF3; nucleotide bindin 100.0 1.3E-36 4.5E-41 326.0 21.6 315 77-472 41-404 (523)
38 3l8k_A Dihydrolipoyl dehydroge 100.0 2.2E-36 7.7E-41 319.9 23.0 293 79-448 4-333 (466)
39 2r9z_A Glutathione amide reduc 100.0 4.7E-36 1.6E-40 317.0 25.3 286 78-447 3-326 (463)
40 3urh_A Dihydrolipoyl dehydroge 100.0 3.1E-36 1.1E-40 321.0 24.0 299 76-447 22-362 (491)
41 2a8x_A Dihydrolipoyl dehydroge 100.0 8.6E-37 3E-41 323.1 19.4 291 80-447 4-333 (464)
42 2wpf_A Trypanothione reductase 100.0 4E-36 1.4E-40 320.0 24.3 288 79-447 7-354 (495)
43 4a5l_A Thioredoxin reductase; 100.0 2.4E-36 8.3E-41 302.8 21.0 299 78-450 3-312 (314)
44 3dk9_A Grase, GR, glutathione 100.0 3.5E-36 1.2E-40 319.6 23.5 297 77-448 18-356 (478)
45 2zbw_A Thioredoxin reductase; 100.0 6.8E-36 2.3E-40 302.4 24.4 308 79-462 5-329 (335)
46 2q7v_A Thioredoxin reductase; 100.0 7.3E-36 2.5E-40 301.0 24.4 301 77-454 6-316 (325)
47 1ojt_A Surface protein; redox- 100.0 2E-36 7E-41 321.6 21.1 293 79-447 6-348 (482)
48 3qfa_A Thioredoxin reductase 1 100.0 1.3E-35 4.6E-40 317.7 27.2 304 74-447 27-379 (519)
49 1fec_A Trypanothione reductase 100.0 1.3E-35 4.4E-40 315.7 26.1 290 79-447 3-350 (490)
50 3itj_A Thioredoxin reductase 1 100.0 5.3E-36 1.8E-40 303.1 21.1 305 74-452 17-337 (338)
51 1onf_A GR, grase, glutathione 100.0 8E-36 2.7E-40 318.3 23.5 293 79-447 2-370 (500)
52 2eq6_A Pyruvate dehydrogenase 100.0 4.3E-36 1.5E-40 317.5 21.2 289 79-447 6-333 (464)
53 4dna_A Probable glutathione re 100.0 9.5E-36 3.2E-40 314.9 22.8 286 79-447 5-330 (463)
54 4gcm_A TRXR, thioredoxin reduc 100.0 1.9E-35 6.4E-40 296.4 23.6 296 78-450 5-306 (312)
55 3r9u_A Thioredoxin reductase; 100.0 1.2E-35 4.2E-40 297.4 21.2 300 78-452 3-314 (315)
56 3dgz_A Thioredoxin reductase 2 100.0 2.5E-35 8.6E-40 313.7 24.4 295 78-447 5-351 (488)
57 2yqu_A 2-oxoglutarate dehydrog 100.0 6.2E-36 2.1E-40 315.7 19.5 289 80-447 2-326 (455)
58 3dgh_A TRXR-1, thioredoxin red 100.0 7.9E-35 2.7E-39 309.5 26.8 297 77-447 7-351 (483)
59 1fl2_A Alkyl hydroperoxide red 100.0 6.6E-35 2.3E-39 291.9 24.5 301 80-453 2-308 (310)
60 3o0h_A Glutathione reductase; 100.0 1.1E-35 3.9E-40 316.0 19.9 287 79-448 26-351 (484)
61 3lad_A Dihydrolipoamide dehydr 100.0 2.8E-35 9.6E-40 312.5 22.7 294 78-447 2-342 (476)
62 3cty_A Thioredoxin reductase; 100.0 6.3E-35 2.1E-39 293.4 23.8 298 78-452 15-318 (319)
63 2q0l_A TRXR, thioredoxin reduc 100.0 6.5E-35 2.2E-39 292.0 23.2 300 80-451 2-310 (311)
64 3ab1_A Ferredoxin--NADP reduct 100.0 6.8E-35 2.3E-39 298.3 23.6 307 78-459 13-337 (360)
65 3lzw_A Ferredoxin--NADP reduct 100.0 4.9E-35 1.7E-39 295.2 21.9 298 79-454 7-319 (332)
66 1trb_A Thioredoxin reductase; 100.0 5.4E-35 1.8E-39 293.8 21.7 301 79-453 5-317 (320)
67 2a87_A TRXR, TR, thioredoxin r 100.0 5.4E-35 1.8E-39 296.1 20.6 299 77-452 12-318 (335)
68 1lvl_A Dihydrolipoamide dehydr 100.0 1.1E-34 3.6E-39 306.3 22.1 285 78-447 4-329 (458)
69 1vdc_A NTR, NADPH dependent th 100.0 1.3E-34 4.5E-39 292.7 20.5 308 79-456 8-329 (333)
70 3ic9_A Dihydrolipoamide dehydr 100.0 2.3E-34 7.8E-39 306.3 22.0 290 79-448 8-338 (492)
71 4b1b_A TRXR, thioredoxin reduc 100.0 3.5E-34 1.2E-38 305.7 22.1 290 79-447 42-383 (542)
72 4fk1_A Putative thioredoxin re 100.0 5.3E-34 1.8E-38 284.8 20.0 293 77-451 4-301 (304)
73 3k30_A Histamine dehydrogenase 100.0 7.3E-36 2.5E-40 330.3 5.2 328 30-460 346-685 (690)
74 2vdc_G Glutamate synthase [NAD 100.0 6.2E-35 2.1E-39 306.5 10.9 307 77-455 120-449 (456)
75 2x8g_A Thioredoxin glutathione 100.0 4.4E-33 1.5E-37 303.8 25.4 299 77-448 105-459 (598)
76 1hyu_A AHPF, alkyl hydroperoxi 100.0 1.4E-32 4.7E-37 294.3 25.3 300 77-452 210-518 (521)
77 4a9w_A Monooxygenase; baeyer-v 100.0 2.3E-33 7.8E-38 285.6 16.1 288 79-451 3-353 (357)
78 1o94_A Tmadh, trimethylamine d 100.0 8.1E-35 2.8E-39 323.2 4.6 321 47-459 361-708 (729)
79 3d1c_A Flavin-containing putat 100.0 3.2E-32 1.1E-36 279.0 17.3 294 79-451 4-340 (369)
80 1ps9_A 2,4-dienoyl-COA reducta 100.0 3.1E-32 1.1E-36 300.4 11.9 301 32-445 334-671 (671)
81 3s5w_A L-ornithine 5-monooxyge 100.0 2.6E-30 9E-35 273.3 19.5 323 79-458 30-457 (463)
82 1lqt_A FPRA; NADP+ derivative, 100.0 1.4E-30 4.8E-35 273.8 16.5 313 79-452 3-389 (456)
83 1gte_A Dihydropyrimidine dehyd 100.0 1.6E-30 5.6E-35 298.2 17.2 317 78-460 186-526 (1025)
84 1cjc_A Protein (adrenodoxin re 100.0 1.6E-30 5.6E-35 273.6 14.2 312 78-453 5-398 (460)
85 2xve_A Flavin-containing monoo 100.0 1.6E-29 5.5E-34 266.8 19.1 280 79-447 2-338 (464)
86 2gag_A Heterotetrameric sarcos 100.0 7.1E-29 2.4E-33 282.7 15.0 300 79-451 128-445 (965)
87 2gv8_A Monooxygenase; FMO, FAD 100.0 2.8E-28 9.6E-33 256.5 14.7 274 78-447 5-359 (447)
88 1y56_A Hypothetical protein PH 100.0 1.3E-28 4.4E-33 261.9 12.1 262 79-449 108-376 (493)
89 3gwf_A Cyclohexanone monooxyge 99.9 8.2E-28 2.8E-32 257.7 10.6 302 78-451 7-458 (540)
90 4ap3_A Steroid monooxygenase; 99.9 1.8E-25 6.1E-30 240.0 14.8 172 78-282 20-226 (549)
91 3uox_A Otemo; baeyer-villiger 99.9 1.3E-25 4.5E-30 240.8 13.5 184 78-285 8-224 (545)
92 1w4x_A Phenylacetone monooxyge 99.9 1.6E-24 5.3E-29 233.2 15.1 175 78-282 15-221 (542)
93 2ywl_A Thioredoxin reductase r 99.9 9.4E-22 3.2E-26 180.3 15.2 163 246-458 3-179 (180)
94 4b63_A L-ornithine N5 monooxyg 99.8 8.5E-19 2.9E-23 186.4 23.3 336 74-443 34-481 (501)
95 2e5v_A L-aspartate oxidase; ar 99.5 2.8E-15 9.6E-20 158.1 2.3 229 144-449 126-368 (472)
96 2gqf_A Hypothetical protein HI 99.5 3.1E-15 1.1E-19 154.4 -1.1 46 398-446 353-399 (401)
97 3fpz_A Thiazole biosynthetic e 99.5 3.7E-17 1.3E-21 164.3 -15.4 261 78-450 64-325 (326)
98 2cul_A Glucose-inhibited divis 99.4 7.8E-14 2.7E-18 132.9 7.0 163 245-449 4-231 (232)
99 3ces_A MNMG, tRNA uridine 5-ca 99.3 4.3E-11 1.5E-15 128.5 16.2 148 78-276 27-219 (651)
100 2zxi_A TRNA uridine 5-carboxym 99.2 1.8E-10 6.1E-15 123.3 16.1 119 78-212 26-189 (637)
101 2ywl_A Thioredoxin reductase r 99.1 2.4E-10 8.1E-15 103.9 9.3 108 80-205 2-112 (180)
102 3k7m_X 6-hydroxy-L-nicotine ox 99.1 6.4E-11 2.2E-15 123.2 4.3 95 288-417 204-306 (431)
103 1rp0_A ARA6, thiazole biosynth 99.0 3.8E-10 1.3E-14 110.7 7.5 183 245-452 40-277 (284)
104 2cul_A Glucose-inhibited divis 98.9 1.1E-09 3.9E-14 103.9 7.4 117 79-211 3-133 (232)
105 4dgk_A Phytoene dehydrogenase; 98.8 2.5E-09 8.6E-14 113.4 3.4 39 79-123 1-39 (501)
106 3nrn_A Uncharacterized protein 98.7 1E-07 3.6E-12 98.6 14.8 56 287-373 188-243 (421)
107 3v76_A Flavoprotein; structura 98.7 1.7E-08 5.7E-13 104.3 8.4 108 78-203 26-187 (417)
108 2bry_A NEDD9 interacting prote 98.7 2.7E-08 9.1E-13 105.4 8.3 120 77-210 90-237 (497)
109 3alj_A 2-methyl-3-hydroxypyrid 98.6 3.9E-08 1.3E-12 100.3 8.3 105 79-203 11-160 (379)
110 3dme_A Conserved exported prot 98.6 5.6E-07 1.9E-11 90.8 16.5 60 288-373 150-209 (369)
111 3nlc_A Uncharacterized protein 98.6 6.8E-08 2.3E-12 102.8 9.4 47 396-450 497-543 (549)
112 1rp0_A ARA6, thiazole biosynth 98.6 1.1E-07 3.6E-12 93.1 9.7 37 79-120 39-75 (284)
113 3cp8_A TRNA uridine 5-carboxym 98.6 5.4E-08 1.8E-12 104.5 7.8 119 77-211 19-182 (641)
114 1ryi_A Glycine oxidase; flavop 98.6 5.3E-08 1.8E-12 99.2 7.1 39 74-118 12-50 (382)
115 2bry_A NEDD9 interacting prote 98.6 3.5E-08 1.2E-12 104.5 5.7 158 191-375 37-232 (497)
116 3ka7_A Oxidoreductase; structu 98.6 3E-07 1E-11 95.0 12.5 57 288-374 196-253 (425)
117 1kf6_A Fumarate reductase flav 98.6 2.1E-07 7.1E-12 100.7 11.4 57 393-450 359-416 (602)
118 2x3n_A Probable FAD-dependent 98.6 1.3E-07 4.3E-12 97.2 9.1 108 79-203 6-166 (399)
119 2i0z_A NAD(FAD)-utilizing dehy 98.5 9.8E-08 3.4E-12 99.7 8.2 37 77-119 24-60 (447)
120 1s3e_A Amine oxidase [flavin-c 98.5 3.2E-07 1.1E-11 97.7 10.9 40 79-124 4-43 (520)
121 3cgv_A Geranylgeranyl reductas 98.5 1.2E-06 4E-11 89.6 14.4 35 79-119 4-38 (397)
122 3pl8_A Pyranose 2-oxidase; sub 98.5 1.6E-08 5.6E-13 109.7 -0.2 38 78-121 45-82 (623)
123 3rp8_A Flavoprotein monooxygen 98.5 1.4E-07 4.8E-12 97.1 6.7 40 74-119 18-57 (407)
124 2xdo_A TETX2 protein; tetracyc 98.5 3.8E-07 1.3E-11 93.6 9.8 40 74-119 21-60 (398)
125 2v3a_A Rubredoxin reductase; a 98.5 4.7E-07 1.6E-11 92.5 10.2 100 79-205 145-245 (384)
126 3pvc_A TRNA 5-methylaminomethy 98.5 1.7E-06 5.8E-11 95.3 15.2 58 288-374 412-470 (689)
127 3i3l_A Alkylhalidase CMLS; fla 98.4 2.9E-07 9.9E-12 99.2 8.5 36 77-118 21-56 (591)
128 3e1t_A Halogenase; flavoprotei 98.4 2.6E-07 9.1E-12 98.1 8.0 34 79-118 7-40 (512)
129 1nhp_A NADH peroxidase; oxidor 98.4 5.3E-07 1.8E-11 94.1 10.1 103 78-208 148-251 (447)
130 3nix_A Flavoprotein/dehydrogen 98.4 1.7E-07 5.9E-12 96.8 6.2 34 79-118 5-38 (421)
131 1k0i_A P-hydroxybenzoate hydro 98.4 2.5E-07 8.4E-12 94.8 6.5 35 79-119 2-36 (394)
132 2vou_A 2,6-dihydroxypyridine h 98.4 7.3E-07 2.5E-11 91.4 10.1 36 78-119 4-39 (397)
133 2yqu_A 2-oxoglutarate dehydrog 98.4 4.5E-07 1.6E-11 94.8 8.7 102 78-207 166-268 (455)
134 3fmw_A Oxygenase; mithramycin, 98.4 4E-07 1.4E-11 97.8 8.2 37 77-119 47-83 (570)
135 1yvv_A Amine oxidase, flavin-c 98.4 3.9E-07 1.3E-11 90.9 7.5 35 79-119 2-36 (336)
136 2gqw_A Ferredoxin reductase; f 98.4 8.7E-07 3E-11 91.3 10.0 96 79-205 145-241 (408)
137 3ps9_A TRNA 5-methylaminomethy 98.4 7E-07 2.4E-11 98.2 9.3 36 77-118 270-305 (676)
138 1y56_B Sarcosine oxidase; dehy 98.4 6.1E-07 2.1E-11 91.3 8.2 35 78-118 4-38 (382)
139 3dje_A Fructosyl amine: oxygen 98.3 7.4E-07 2.5E-11 92.6 8.3 36 78-119 5-41 (438)
140 3kkj_A Amine oxidase, flavin-c 98.3 3.3E-07 1.1E-11 87.6 5.1 39 78-122 1-39 (336)
141 3ef6_A Toluene 1,2-dioxygenase 98.3 5.7E-07 1.9E-11 92.7 7.2 100 79-205 143-243 (410)
142 3oz2_A Digeranylgeranylglycero 98.3 3E-07 1E-11 93.7 5.0 36 79-120 4-39 (397)
143 3itj_A Thioredoxin reductase 1 98.3 2.3E-06 7.9E-11 85.1 11.0 104 244-377 22-146 (338)
144 1y0p_A Fumarate reductase flav 98.3 9.8E-07 3.3E-11 95.1 8.8 36 79-120 126-161 (571)
145 2uzz_A N-methyl-L-tryptophan o 98.3 4.5E-07 1.5E-11 91.9 5.8 35 79-119 2-36 (372)
146 2eq6_A Pyruvate dehydrogenase 98.3 1.2E-06 3.9E-11 92.0 9.0 101 79-207 169-275 (464)
147 4a9w_A Monooxygenase; baeyer-v 98.3 2.5E-06 8.4E-11 85.5 11.0 94 245-371 4-130 (357)
148 3lxd_A FAD-dependent pyridine 98.3 1.9E-06 6.6E-11 88.9 10.3 101 79-205 152-253 (415)
149 3klj_A NAD(FAD)-dependent dehy 98.3 6.2E-07 2.1E-11 91.6 6.5 99 245-378 10-121 (385)
150 3f8d_A Thioredoxin reductase ( 98.3 2.2E-06 7.5E-11 84.6 10.3 101 245-378 16-130 (323)
151 1lvl_A Dihydrolipoamide dehydr 98.3 6.8E-07 2.3E-11 93.6 6.7 99 79-207 171-272 (458)
152 3ihg_A RDME; flavoenzyme, anth 98.3 1.2E-06 4.1E-11 93.6 8.8 36 78-119 4-39 (535)
153 2bc0_A NADH oxidase; flavoprot 98.3 1.9E-06 6.6E-11 90.9 10.2 101 78-206 193-294 (490)
154 1ges_A Glutathione reductase; 98.3 1.5E-06 5.1E-11 90.7 9.2 101 79-206 167-268 (450)
155 4eqs_A Coenzyme A disulfide re 98.3 1.9E-06 6.6E-11 89.5 10.0 96 79-206 147-243 (437)
156 1xhc_A NADH oxidase /nitrite r 98.3 1.2E-06 4.1E-11 88.9 8.2 92 80-205 144-236 (367)
157 3oc4_A Oxidoreductase, pyridin 98.3 4.1E-06 1.4E-10 87.4 12.3 102 79-208 147-249 (452)
158 2gf3_A MSOX, monomeric sarcosi 98.3 9E-07 3.1E-11 90.2 7.2 35 79-119 3-37 (389)
159 3nyc_A D-arginine dehydrogenas 98.3 4.2E-07 1.4E-11 92.3 4.5 34 78-118 8-41 (381)
160 3lzw_A Ferredoxin--NADP reduct 98.3 1.8E-06 6.3E-11 85.6 9.1 100 245-376 8-129 (332)
161 2r9z_A Glutathione amide reduc 98.3 1.8E-06 6.2E-11 90.4 9.2 100 79-206 166-267 (463)
162 3vrd_B FCCB subunit, flavocyto 98.2 9E-07 3.1E-11 90.8 6.5 100 244-376 2-111 (401)
163 3fg2_P Putative rubredoxin red 98.2 1.8E-06 6.2E-11 88.7 8.7 101 79-205 142-243 (404)
164 3sx6_A Sulfide-quinone reducta 98.2 1.5E-06 5.1E-11 90.4 8.0 102 245-378 5-117 (437)
165 1onf_A GR, grase, glutathione 98.2 3.7E-06 1.3E-10 88.9 11.2 101 79-206 176-278 (500)
166 3qj4_A Renalase; FAD/NAD(P)-bi 98.2 1.5E-06 5.2E-11 87.1 7.8 37 80-119 2-38 (342)
167 1v59_A Dihydrolipoamide dehydr 98.2 2.1E-06 7.2E-11 90.3 9.1 100 79-206 183-290 (478)
168 3hyw_A Sulfide-quinone reducta 98.2 5.2E-07 1.8E-11 93.6 4.3 95 245-374 3-110 (430)
169 1ebd_A E3BD, dihydrolipoamide 98.2 2.3E-06 8E-11 89.4 9.2 102 78-207 169-274 (455)
170 1qo8_A Flavocytochrome C3 fuma 98.2 1.3E-06 4.4E-11 94.0 7.4 58 393-450 502-564 (566)
171 1q1r_A Putidaredoxin reductase 98.2 2.4E-06 8.1E-11 88.7 9.1 100 79-205 149-252 (431)
172 2oln_A NIKD protein; flavoprot 98.2 1.4E-06 4.7E-11 89.3 6.9 35 79-119 4-38 (397)
173 1d4d_A Flavocytochrome C fumar 98.2 2E-06 6.9E-11 92.5 8.5 37 78-120 125-161 (572)
174 1zmd_A Dihydrolipoyl dehydroge 98.2 3.5E-06 1.2E-10 88.6 10.1 102 79-206 178-285 (474)
175 2gag_B Heterotetrameric sarcos 98.2 1.9E-06 6.6E-11 88.2 7.9 35 78-118 20-56 (405)
176 2zbw_A Thioredoxin reductase; 98.2 7.1E-06 2.4E-10 81.7 11.9 96 245-372 6-120 (335)
177 1fec_A Trypanothione reductase 98.2 3.2E-06 1.1E-10 89.2 9.6 105 78-206 186-291 (490)
178 2cdu_A NADPH oxidase; flavoenz 98.2 3.4E-06 1.2E-10 88.1 9.7 100 79-206 149-250 (452)
179 2wpf_A Trypanothione reductase 98.2 3.2E-06 1.1E-10 89.3 9.5 104 79-206 191-295 (495)
180 2qa1_A PGAE, polyketide oxygen 98.2 2.3E-06 7.7E-11 90.6 8.2 38 76-119 8-45 (500)
181 2hqm_A GR, grase, glutathione 98.2 2.9E-06 9.9E-11 89.3 9.0 102 78-205 184-287 (479)
182 3h8l_A NADH oxidase; membrane 98.2 1.1E-06 3.7E-11 90.5 5.6 104 245-376 2-116 (409)
183 3atr_A Conserved archaeal prot 98.2 1.3E-06 4.4E-11 91.3 6.1 35 79-119 6-40 (453)
184 2qa2_A CABE, polyketide oxygen 98.2 3.9E-06 1.3E-10 88.7 9.7 37 77-119 10-46 (499)
185 3iwa_A FAD-dependent pyridine 98.2 2.8E-06 9.6E-11 89.2 8.5 100 79-205 159-260 (472)
186 2gmh_A Electron transfer flavo 98.2 1.9E-06 6.4E-11 93.0 7.3 43 78-120 34-76 (584)
187 4hb9_A Similarities with proba 98.2 4E-06 1.4E-10 85.9 9.3 35 80-120 2-36 (412)
188 3fbs_A Oxidoreductase; structu 98.2 6.7E-06 2.3E-10 80.1 10.2 100 245-377 3-116 (297)
189 3kd9_A Coenzyme A disulfide re 98.2 6E-06 2E-10 86.1 10.4 98 79-205 148-246 (449)
190 2q0l_A TRXR, thioredoxin reduc 98.1 9.4E-06 3.2E-10 79.9 11.2 98 246-376 3-117 (311)
191 3c96_A Flavin-containing monoo 98.1 1.8E-06 6E-11 89.0 5.9 35 79-119 4-39 (410)
192 1ojt_A Surface protein; redox- 98.1 2.2E-06 7.6E-11 90.3 6.7 100 79-206 185-289 (482)
193 3ab1_A Ferredoxin--NADP reduct 98.1 1.5E-05 5.2E-10 80.3 12.6 98 245-373 15-131 (360)
194 3ntd_A FAD-dependent pyridine 98.1 5.4E-06 1.8E-10 89.1 9.8 110 79-205 151-269 (565)
195 3ics_A Coenzyme A-disulfide re 98.1 5.2E-06 1.8E-10 89.7 9.2 97 79-205 187-284 (588)
196 3cgb_A Pyridine nucleotide-dis 98.1 3.8E-06 1.3E-10 88.4 8.0 100 78-206 185-285 (480)
197 3c4n_A Uncharacterized protein 98.1 2.1E-06 7.2E-11 88.3 5.8 36 79-118 36-71 (405)
198 2a8x_A Dihydrolipoyl dehydroge 98.1 6.4E-06 2.2E-10 86.3 9.1 101 79-207 171-275 (464)
199 2qae_A Lipoamide, dihydrolipoy 98.1 7.6E-06 2.6E-10 85.8 9.7 101 78-206 173-279 (468)
200 1mo9_A ORF3; nucleotide bindin 98.1 6.3E-06 2.1E-10 87.7 9.2 103 80-206 215-319 (523)
201 3v76_A Flavoprotein; structura 98.1 9.4E-06 3.2E-10 83.6 10.1 97 245-374 28-188 (417)
202 1m6i_A Programmed cell death p 98.1 5.8E-06 2E-10 87.3 8.4 104 79-205 180-284 (493)
203 3lad_A Dihydrolipoamide dehydr 98.1 1.2E-05 4.2E-10 84.3 10.8 101 78-206 179-283 (476)
204 2q7v_A Thioredoxin reductase; 98.1 1.9E-05 6.6E-10 78.2 11.6 99 245-376 9-126 (325)
205 1xdi_A RV3303C-LPDA; reductase 98.1 6.9E-06 2.4E-10 86.9 8.8 101 78-206 181-282 (499)
206 3jsk_A Cypbp37 protein; octame 98.1 6.8E-06 2.3E-10 81.7 8.0 38 79-120 79-116 (344)
207 3h28_A Sulfide-quinone reducta 98.0 2E-06 7E-11 89.1 4.2 99 245-376 3-112 (430)
208 3ic9_A Dihydrolipoamide dehydr 98.0 1.1E-05 3.7E-10 85.2 9.8 101 78-207 173-278 (492)
209 4b1b_A TRXR, thioredoxin reduc 98.0 7.3E-06 2.5E-10 87.1 8.4 100 78-206 222-322 (542)
210 1dxl_A Dihydrolipoamide dehydr 98.0 5.9E-06 2E-10 86.6 7.5 101 78-206 176-282 (470)
211 3d1c_A Flavin-containing putat 98.0 2.8E-05 9.5E-10 78.4 12.2 98 245-374 5-144 (369)
212 1fl2_A Alkyl hydroperoxide red 98.0 1.3E-05 4.3E-10 78.9 9.5 102 246-376 3-118 (310)
213 2gv8_A Monooxygenase; FMO, FAD 98.0 1.4E-05 4.7E-10 83.3 10.2 106 244-376 6-182 (447)
214 1zk7_A HGII, reductase, mercur 98.0 7.7E-06 2.6E-10 85.7 8.2 98 79-206 176-274 (467)
215 3nlc_A Uncharacterized protein 98.0 1.8E-05 6E-10 84.2 11.0 98 245-374 108-278 (549)
216 4at0_A 3-ketosteroid-delta4-5a 98.0 1.6E-05 5.6E-10 84.2 10.7 37 78-120 40-76 (510)
217 3o0h_A Glutathione reductase; 98.0 1.1E-05 3.8E-10 84.9 9.0 102 78-207 190-292 (484)
218 2e4g_A Tryptophan halogenase; 98.0 9.8E-06 3.3E-10 86.8 8.6 38 78-118 24-61 (550)
219 2weu_A Tryptophan 5-halogenase 98.0 7.7E-06 2.6E-10 86.8 7.7 37 79-118 2-38 (511)
220 3urh_A Dihydrolipoyl dehydroge 98.0 1.2E-05 4E-10 84.9 8.8 102 78-207 197-304 (491)
221 3alj_A 2-methyl-3-hydroxypyrid 98.0 4E-05 1.4E-09 77.8 12.5 96 244-374 11-161 (379)
222 3r9u_A Thioredoxin reductase; 98.0 3.1E-05 1.1E-09 76.0 11.1 102 244-378 4-123 (315)
223 2aqj_A Tryptophan halogenase, 98.0 1.4E-05 4.8E-10 85.3 9.1 37 79-118 5-41 (538)
224 1vdc_A NTR, NADPH dependent th 98.0 2.1E-05 7.2E-10 78.1 9.7 98 245-376 9-127 (333)
225 4dna_A Probable glutathione re 98.0 1.9E-05 6.4E-10 82.7 9.7 102 78-207 169-272 (463)
226 2gqf_A Hypothetical protein HI 98.0 2.8E-05 9.4E-10 79.7 10.7 100 246-374 6-169 (401)
227 2xve_A Flavin-containing monoo 98.0 4.5E-05 1.5E-09 79.8 12.4 112 245-378 3-173 (464)
228 2r0c_A REBC; flavin adenine di 97.9 9.2E-06 3.1E-10 87.0 7.1 36 78-119 25-60 (549)
229 4ap3_A Steroid monooxygenase; 97.9 2.7E-05 9.3E-10 83.2 10.5 104 245-378 22-166 (549)
230 1trb_A Thioredoxin reductase; 97.9 3E-05 1E-09 76.4 9.8 98 245-376 6-119 (320)
231 2x3n_A Probable FAD-dependent 97.9 3.2E-05 1.1E-09 79.1 10.1 98 245-374 7-167 (399)
232 2gjc_A Thiazole biosynthetic e 97.9 2.2E-05 7.6E-10 77.5 8.4 38 79-120 65-102 (326)
233 3dk9_A Grase, GR, glutathione 97.9 2.8E-05 9.6E-10 81.6 9.6 103 78-206 186-296 (478)
234 2qcu_A Aerobic glycerol-3-phos 97.9 1.2E-05 4.2E-10 85.0 6.7 34 79-118 3-36 (501)
235 3cty_A Thioredoxin reductase; 97.9 4.2E-05 1.4E-09 75.6 10.1 98 245-376 17-129 (319)
236 1pj5_A N,N-dimethylglycine oxi 97.9 1.3E-05 4.5E-10 90.1 7.1 35 79-119 4-39 (830)
237 4fk1_A Putative thioredoxin re 97.9 4.8E-05 1.7E-09 74.7 10.4 102 246-378 8-122 (304)
238 3gwf_A Cyclohexanone monooxyge 97.9 4.2E-05 1.4E-09 81.5 10.6 102 245-376 9-152 (540)
239 2a87_A TRXR, TR, thioredoxin r 97.9 5E-05 1.7E-09 75.6 10.5 98 245-376 15-129 (335)
240 3uox_A Otemo; baeyer-villiger 97.9 4.3E-05 1.5E-09 81.5 10.5 104 245-378 10-154 (545)
241 1hyu_A AHPF, alkyl hydroperoxi 97.9 5.2E-05 1.8E-09 80.5 10.9 104 244-376 212-329 (521)
242 3s5w_A L-ornithine 5-monooxyge 97.8 3.8E-05 1.3E-09 80.2 9.3 109 246-376 32-195 (463)
243 2pyx_A Tryptophan halogenase; 97.8 3.8E-05 1.3E-09 81.7 9.2 41 78-118 6-52 (526)
244 2vou_A 2,6-dihydroxypyridine h 97.8 7.1E-05 2.4E-09 76.5 10.7 99 244-374 5-154 (397)
245 1yvv_A Amine oxidase, flavin-c 97.8 0.00011 3.9E-09 72.8 11.6 34 245-281 3-36 (336)
246 3dgh_A TRXR-1, thioredoxin red 97.8 4.2E-05 1.4E-09 80.4 8.8 101 78-206 186-292 (483)
247 4gcm_A TRXR, thioredoxin reduc 97.8 8.4E-05 2.9E-09 73.1 10.5 99 246-378 8-121 (312)
248 2dkh_A 3-hydroxybenzoate hydro 97.8 3.1E-05 1.1E-09 84.3 7.6 37 78-119 31-67 (639)
249 3jsk_A Cypbp37 protein; octame 97.8 5.6E-05 1.9E-09 75.1 8.7 195 245-450 80-335 (344)
250 2vdc_G Glutamate synthase [NAD 97.8 2.8E-05 9.6E-10 81.0 6.8 66 243-311 121-195 (456)
251 4gde_A UDP-galactopyranose mut 97.8 1.3E-05 4.4E-10 84.8 4.3 42 78-124 9-50 (513)
252 3l8k_A Dihydrolipoyl dehydroge 97.7 5E-05 1.7E-09 79.5 8.4 99 78-206 171-275 (466)
253 3k30_A Histamine dehydrogenase 97.7 6.4E-05 2.2E-09 82.7 9.7 98 78-204 522-625 (690)
254 2b9w_A Putative aminooxidase; 97.7 2.4E-05 8.1E-10 80.7 5.9 41 78-124 5-46 (424)
255 3ihm_A Styrene monooxygenase A 97.7 2E-05 6.8E-10 81.6 4.9 37 76-118 19-55 (430)
256 3dgz_A Thioredoxin reductase 2 97.7 6.8E-05 2.3E-09 78.9 9.0 101 78-206 184-290 (488)
257 2i0z_A NAD(FAD)-utilizing dehy 97.7 0.00015 5E-09 75.5 11.1 97 245-373 27-191 (447)
258 3nks_A Protoporphyrinogen oxid 97.7 2.9E-05 1E-09 81.3 5.8 40 79-124 2-43 (477)
259 1k0i_A P-hydroxybenzoate hydro 97.7 0.00026 8.9E-09 72.0 12.6 99 246-374 4-164 (394)
260 2e1m_A L-glutamate oxidase; L- 97.7 4.7E-05 1.6E-09 77.0 6.4 41 77-123 42-83 (376)
261 4a5l_A Thioredoxin reductase; 97.6 0.00022 7.5E-09 70.0 11.0 100 246-378 6-126 (314)
262 3qfa_A Thioredoxin reductase 1 97.6 0.00012 4E-09 77.8 9.3 107 78-207 209-319 (519)
263 1ryi_A Glycine oxidase; flavop 97.6 0.00019 6.6E-09 72.5 10.5 32 245-279 18-49 (382)
264 2ivd_A PPO, PPOX, protoporphyr 97.6 3.9E-05 1.3E-09 80.4 5.2 45 74-124 11-55 (478)
265 1rsg_A FMS1 protein; FAD bindi 97.6 2.8E-05 9.5E-10 82.5 4.1 41 78-124 7-48 (516)
266 3nix_A Flavoprotein/dehydrogen 97.6 0.00019 6.6E-09 73.6 10.4 99 245-373 6-166 (421)
267 4g6h_A Rotenone-insensitive NA 97.6 8.4E-05 2.9E-09 78.4 7.6 103 80-204 218-333 (502)
268 1qo8_A Flavocytochrome C3 fuma 97.6 0.00033 1.1E-08 75.1 12.2 34 245-281 122-155 (566)
269 2jae_A L-amino acid oxidase; o 97.6 7.2E-05 2.4E-09 78.7 6.8 41 77-123 9-49 (489)
270 1cjc_A Protein (adrenodoxin re 97.6 6E-05 2.1E-09 78.7 5.9 67 244-311 6-82 (460)
271 1v0j_A UDP-galactopyranose mut 97.6 4.6E-05 1.6E-09 78.0 4.7 42 78-124 6-47 (399)
272 3i6d_A Protoporphyrinogen oxid 97.6 3.2E-05 1.1E-09 80.7 3.5 45 79-123 5-49 (470)
273 2bcg_G Secretory pathway GDP d 97.5 5.6E-05 1.9E-09 78.8 5.3 41 78-124 10-50 (453)
274 3qj4_A Renalase; FAD/NAD(P)-bi 97.5 0.00015 5.3E-09 72.3 8.0 32 246-280 3-37 (342)
275 3oz2_A Digeranylgeranylglycero 97.5 0.00042 1.4E-08 70.0 11.2 100 246-373 6-162 (397)
276 1c0p_A D-amino acid oxidase; a 97.5 7.9E-05 2.7E-09 75.0 5.7 35 78-118 5-39 (363)
277 1y56_B Sarcosine oxidase; dehy 97.5 0.00055 1.9E-08 69.2 11.9 32 245-279 6-37 (382)
278 3e1t_A Halogenase; flavoprotei 97.5 0.00049 1.7E-08 72.8 11.9 101 245-374 8-173 (512)
279 1w4x_A Phenylacetone monooxyge 97.5 0.0004 1.4E-08 74.0 11.1 101 245-375 17-158 (542)
280 3rp8_A Flavoprotein monooxygen 97.5 0.00041 1.4E-08 71.0 10.8 35 244-281 23-57 (407)
281 1y0p_A Fumarate reductase flav 97.5 0.00036 1.2E-08 74.9 10.9 35 245-282 127-161 (571)
282 2x8g_A Thioredoxin glutathione 97.5 0.00019 6.6E-09 77.5 8.8 105 79-206 286-398 (598)
283 1y56_A Hypothetical protein PH 97.5 7.9E-05 2.7E-09 78.5 5.5 101 245-376 109-222 (493)
284 2gag_B Heterotetrameric sarcos 97.5 0.00057 2E-08 69.6 11.6 33 245-280 22-56 (405)
285 3ces_A MNMG, tRNA uridine 5-ca 97.5 0.00043 1.5E-08 74.4 10.7 45 401-454 378-422 (651)
286 2uzz_A N-methyl-L-tryptophan o 97.5 0.00057 1.9E-08 68.8 11.2 32 246-280 4-35 (372)
287 3ihg_A RDME; flavoenzyme, anth 97.4 0.00047 1.6E-08 73.3 11.0 104 245-373 6-183 (535)
288 3hdq_A UDP-galactopyranose mut 97.4 0.00011 3.7E-09 74.9 5.4 41 77-123 27-67 (397)
289 3c4a_A Probable tryptophan hyd 97.4 8.1E-05 2.8E-09 75.6 4.5 37 80-120 1-37 (381)
290 1lqt_A FPRA; NADP+ derivative, 97.4 0.00012 4.1E-09 76.3 5.8 91 244-372 3-107 (456)
291 3fmw_A Oxygenase; mithramycin, 97.4 0.00045 1.5E-08 74.0 10.4 98 246-373 51-207 (570)
292 2gf3_A MSOX, monomeric sarcosi 97.4 0.00084 2.9E-08 67.9 12.0 32 246-280 5-36 (389)
293 2qa2_A CABE, polyketide oxygen 97.4 0.00099 3.4E-08 70.2 12.9 101 244-373 12-166 (499)
294 2vvm_A Monoamine oxidase N; FA 97.4 0.00014 4.7E-09 76.6 6.2 39 80-124 40-78 (495)
295 3i3l_A Alkylhalidase CMLS; fla 97.4 0.00088 3E-08 72.0 12.5 101 245-373 24-188 (591)
296 1sez_A Protoporphyrinogen oxid 97.4 0.00013 4.3E-09 77.1 5.8 40 78-123 12-51 (504)
297 2iid_A L-amino-acid oxidase; f 97.4 0.00014 4.8E-09 76.6 5.8 41 77-123 31-71 (498)
298 3atr_A Conserved archaeal prot 97.4 0.00051 1.7E-08 71.5 9.9 101 245-374 7-163 (453)
299 2xdo_A TETX2 protein; tetracyc 97.4 0.00038 1.3E-08 71.0 8.8 35 245-282 27-61 (398)
300 2yg5_A Putrescine oxidase; oxi 97.4 0.00011 3.7E-09 76.4 4.8 40 79-124 5-44 (453)
301 3lov_A Protoporphyrinogen oxid 97.4 0.00013 4.6E-09 76.2 5.4 41 79-123 4-44 (475)
302 3ps9_A TRNA 5-methylaminomethy 97.4 0.00059 2E-08 74.8 10.7 33 245-280 273-305 (676)
303 2qa1_A PGAE, polyketide oxygen 97.4 0.001 3.6E-08 70.0 12.1 101 244-373 11-165 (500)
304 2xag_A Lysine-specific histone 97.3 0.0001 3.4E-09 82.4 4.2 40 77-122 276-315 (852)
305 2z3y_A Lysine-specific histone 97.3 0.00013 4.5E-09 79.7 4.8 41 76-122 104-144 (662)
306 3cp8_A TRNA uridine 5-carboxym 97.3 0.00099 3.4E-08 71.5 11.5 46 401-455 372-417 (641)
307 1ps9_A 2,4-dienoyl-COA reducta 97.3 0.00043 1.5E-08 75.8 8.9 103 78-204 493-629 (671)
308 2zxi_A TRNA uridine 5-carboxym 97.3 0.00076 2.6E-08 72.2 10.3 46 401-455 383-428 (637)
309 1gte_A Dihydropyrimidine dehyd 97.3 0.00015 5E-09 83.3 5.1 93 244-374 187-289 (1025)
310 2bi7_A UDP-galactopyranose mut 97.3 0.00021 7.3E-09 72.6 5.6 38 80-123 4-41 (384)
311 1i8t_A UDP-galactopyranose mut 97.3 0.00015 5.3E-09 73.2 4.5 38 80-123 2-39 (367)
312 3g5s_A Methylenetetrahydrofola 97.3 0.00019 6.6E-09 71.9 4.9 50 399-457 320-369 (443)
313 4dsg_A UDP-galactopyranose mut 97.3 0.00018 6.2E-09 75.5 5.1 41 77-123 7-48 (484)
314 1d4d_A Flavocytochrome C fumar 97.2 0.0011 3.8E-08 71.1 10.8 34 245-281 127-160 (572)
315 3g3e_A D-amino-acid oxidase; F 97.2 0.00015 5.3E-09 72.5 3.7 39 80-118 1-39 (351)
316 3nyc_A D-arginine dehydrogenas 97.2 0.00093 3.2E-08 67.3 9.5 33 244-280 9-41 (381)
317 4hb9_A Similarities with proba 97.2 0.0015 5E-08 66.5 11.0 35 245-282 2-36 (412)
318 3c4n_A Uncharacterized protein 97.2 0.00089 3E-08 68.5 9.2 32 245-279 37-70 (405)
319 2gmh_A Electron transfer flavo 97.2 0.0028 9.6E-08 68.1 13.0 104 246-374 37-218 (584)
320 2gjc_A Thiazole biosynthetic e 97.1 0.0031 1E-07 62.1 12.0 182 245-450 66-325 (326)
321 2oln_A NIKD protein; flavoprot 97.1 0.0027 9.3E-08 64.5 11.9 32 246-280 6-37 (397)
322 3da1_A Glycerol-3-phosphate de 97.1 0.00032 1.1E-08 75.1 4.7 36 78-119 17-52 (561)
323 1d5t_A Guanine nucleotide diss 97.1 0.00043 1.5E-08 71.6 5.4 40 78-123 5-44 (433)
324 3axb_A Putative oxidoreductase 97.1 0.0002 6.7E-09 74.4 2.8 36 78-119 22-58 (448)
325 2gag_A Heterotetrameric sarcos 97.0 0.0015 5.3E-08 74.3 9.8 115 245-376 129-256 (965)
326 3p1w_A Rabgdi protein; GDI RAB 97.0 0.00043 1.5E-08 72.0 4.7 41 77-123 18-58 (475)
327 3c96_A Flavin-containing monoo 97.0 0.0031 1.1E-07 64.4 11.2 34 245-281 5-39 (410)
328 1o94_A Tmadh, trimethylamine d 97.0 0.00065 2.2E-08 75.1 6.1 96 79-204 528-647 (729)
329 2rgh_A Alpha-glycerophosphate 96.9 0.00053 1.8E-08 73.5 4.6 35 79-119 32-66 (571)
330 3dje_A Fructosyl amine: oxygen 96.9 0.0053 1.8E-07 63.2 12.1 33 245-280 7-40 (438)
331 2wdq_A Succinate dehydrogenase 96.9 0.00058 2E-08 73.4 4.7 34 79-118 7-40 (588)
332 1b37_A Protein (polyamine oxid 96.9 0.00075 2.6E-08 70.5 5.2 39 78-122 3-42 (472)
333 4at0_A 3-ketosteroid-delta4-5a 96.9 0.0054 1.8E-07 64.7 11.9 33 246-281 43-75 (510)
334 2h88_A Succinate dehydrogenase 96.9 0.00065 2.2E-08 73.4 4.7 34 79-118 18-51 (621)
335 2bs2_A Quinol-fumarate reducta 96.8 0.00068 2.3E-08 73.8 4.7 58 392-450 371-429 (660)
336 4gut_A Lysine-specific histone 96.8 0.0008 2.7E-08 74.5 5.0 39 78-122 335-373 (776)
337 3da1_A Glycerol-3-phosphate de 96.7 0.0066 2.3E-07 64.8 11.3 32 245-279 19-50 (561)
338 2qcu_A Aerobic glycerol-3-phos 96.7 0.0073 2.5E-07 63.5 11.4 32 245-279 4-35 (501)
339 3gyx_A Adenylylsulfate reducta 96.7 0.00078 2.7E-08 73.3 4.0 46 400-452 446-491 (662)
340 3c4a_A Probable tryptophan hyd 96.7 0.0015 5E-08 66.2 5.4 34 246-282 2-37 (381)
341 3ayj_A Pro-enzyme of L-phenyla 96.7 0.0011 3.7E-08 72.2 4.6 42 79-120 56-100 (721)
342 1jnr_A Adenylylsulfate reducta 96.7 0.0011 3.8E-08 72.1 4.7 36 78-118 21-59 (643)
343 1kdg_A CDH, cellobiose dehydro 96.7 0.0011 3.8E-08 70.6 4.6 37 77-119 5-41 (546)
344 1pj5_A N,N-dimethylglycine oxi 96.6 0.0089 3.1E-07 67.0 11.7 33 245-280 5-38 (830)
345 1chu_A Protein (L-aspartate ox 96.6 0.0011 3.9E-08 70.4 4.1 56 393-449 354-410 (540)
346 1pn0_A Phenol 2-monooxygenase; 96.6 0.0018 6.1E-08 70.7 5.7 40 79-119 8-47 (665)
347 2aqj_A Tryptophan halogenase, 96.5 0.013 4.4E-07 62.2 11.9 33 244-279 5-40 (538)
348 2r0c_A REBC; flavin adenine di 96.5 0.015 5.3E-07 61.8 12.3 33 246-281 28-60 (549)
349 4g65_A TRK system potassium up 96.5 0.0058 2E-07 63.4 8.3 33 80-118 4-36 (461)
350 3t37_A Probable dehydrogenase; 96.4 0.0019 6.6E-08 68.3 4.4 37 78-119 16-52 (526)
351 2dkh_A 3-hydroxybenzoate hydro 96.4 0.0099 3.4E-07 64.5 10.1 32 246-280 34-66 (639)
352 2e5v_A L-aspartate oxidase; ar 96.4 0.0079 2.7E-07 62.7 8.8 31 246-279 1-31 (472)
353 2e4g_A Tryptophan halogenase; 96.3 0.025 8.5E-07 60.2 12.3 37 244-280 25-61 (550)
354 3qvp_A Glucose oxidase; oxidor 96.2 0.003 1E-07 67.6 4.5 36 78-118 18-53 (583)
355 4b63_A L-ornithine N5 monooxyg 96.1 0.027 9.1E-07 59.2 11.4 115 246-376 41-217 (501)
356 3q9t_A Choline dehydrogenase a 96.1 0.0034 1.2E-07 67.1 4.5 37 78-119 5-41 (577)
357 3i6d_A Protoporphyrinogen oxid 96.1 0.022 7.5E-07 58.9 10.6 35 245-282 6-46 (470)
358 3lk7_A UDP-N-acetylmuramoylala 96.1 0.0041 1.4E-07 64.5 4.7 35 78-118 8-42 (451)
359 1kf6_A Fumarate reductase flav 96.0 0.017 5.8E-07 62.1 9.6 32 246-280 7-40 (602)
360 2rgh_A Alpha-glycerophosphate 96.0 0.028 9.7E-07 60.0 11.0 32 245-279 33-64 (571)
361 1coy_A Cholesterol oxidase; ox 95.9 0.0061 2.1E-07 64.2 5.1 38 77-120 9-46 (507)
362 3axb_A Putative oxidoreductase 95.8 0.044 1.5E-06 56.4 11.3 31 245-278 24-55 (448)
363 3fwz_A Inner membrane protein 95.8 0.011 3.9E-07 50.3 5.6 39 75-119 3-41 (140)
364 2weu_A Tryptophan 5-halogenase 95.8 0.047 1.6E-06 57.3 11.4 32 245-279 3-37 (511)
365 1n4w_A CHOD, cholesterol oxida 95.7 0.0061 2.1E-07 64.2 4.3 37 79-121 5-41 (504)
366 3dfz_A SIRC, precorrin-2 dehyd 95.7 0.013 4.5E-07 54.2 6.0 36 77-118 29-64 (223)
367 1pn0_A Phenol 2-monooxygenase; 95.7 0.046 1.6E-06 59.5 11.3 31 246-279 10-45 (665)
368 3fim_B ARYL-alcohol oxidase; A 95.6 0.0062 2.1E-07 64.9 3.8 37 79-120 2-38 (566)
369 4gut_A Lysine-specific histone 95.4 0.071 2.4E-06 58.9 11.5 36 244-282 336-371 (776)
370 2jbv_A Choline oxidase; alcoho 95.3 0.012 4.1E-07 62.6 4.5 38 78-120 12-49 (546)
371 1ju2_A HydroxynitrIle lyase; f 95.3 0.0084 2.9E-07 63.6 3.3 35 78-119 25-59 (536)
372 3llv_A Exopolyphosphatase-rela 95.2 0.014 5E-07 49.6 4.1 34 79-118 6-39 (141)
373 2wdq_A Succinate dehydrogenase 95.1 0.13 4.3E-06 55.2 12.0 31 246-279 9-39 (588)
374 3eag_A UDP-N-acetylmuramate:L- 95.1 0.03 1E-06 55.2 6.6 36 78-119 3-39 (326)
375 2g1u_A Hypothetical protein TM 95.1 0.025 8.6E-07 49.0 5.3 36 78-119 18-53 (155)
376 1gpe_A Protein (glucose oxidas 95.0 0.016 5.3E-07 62.3 4.4 38 78-120 23-60 (587)
377 3ic5_A Putative saccharopine d 95.0 0.024 8.3E-07 46.1 4.7 34 79-118 5-39 (118)
378 1id1_A Putative potassium chan 94.8 0.031 1.1E-06 48.3 5.2 34 79-118 3-36 (153)
379 1chu_A Protein (L-aspartate ox 94.7 0.056 1.9E-06 57.3 7.9 33 245-281 9-41 (540)
380 1lss_A TRK system potassium up 94.5 0.04 1.4E-06 46.4 5.0 33 80-118 5-37 (140)
381 3kkj_A Amine oxidase, flavin-c 94.3 0.027 9.4E-07 52.6 3.8 34 246-282 4-37 (336)
382 2h88_A Succinate dehydrogenase 94.2 0.13 4.6E-06 55.2 9.4 31 246-279 20-50 (621)
383 3lk7_A UDP-N-acetylmuramoylala 94.0 0.069 2.3E-06 55.2 6.4 55 244-309 9-63 (451)
384 1pjq_A CYSG, siroheme synthase 93.8 0.087 3E-06 54.5 6.7 35 78-118 11-45 (457)
385 2hmt_A YUAA protein; RCK, KTN, 93.7 0.051 1.7E-06 45.9 4.1 34 79-118 6-39 (144)
386 3eag_A UDP-N-acetylmuramate:L- 93.5 0.096 3.3E-06 51.5 6.3 52 244-308 4-56 (326)
387 2x5o_A UDP-N-acetylmuramoylala 93.4 0.049 1.7E-06 56.1 4.0 35 79-119 5-39 (439)
388 1vg0_A RAB proteins geranylger 93.2 0.083 2.9E-06 56.7 5.6 41 77-123 6-46 (650)
389 3c85_A Putative glutathione-re 93.2 0.076 2.6E-06 47.3 4.5 35 78-118 38-73 (183)
390 1kyq_A Met8P, siroheme biosynt 92.9 0.057 2E-06 51.5 3.5 35 78-118 12-46 (274)
391 3dfz_A SIRC, precorrin-2 dehyd 92.9 0.11 3.8E-06 47.9 5.3 51 244-307 31-81 (223)
392 2iid_A L-amino-acid oxidase; f 92.7 0.23 8E-06 51.7 8.2 59 244-305 33-109 (498)
393 3fpz_A Thiazole biosynthetic e 92.6 0.12 4.2E-06 50.6 5.5 66 245-313 66-141 (326)
394 1jnr_A Adenylylsulfate reducta 92.5 0.4 1.4E-05 51.9 9.8 32 246-280 24-59 (643)
395 4dio_A NAD(P) transhydrogenase 92.2 0.14 4.9E-06 51.5 5.4 36 78-119 189-224 (405)
396 1f0y_A HCDH, L-3-hydroxyacyl-C 92.2 0.16 5.3E-06 49.3 5.7 35 79-119 15-49 (302)
397 3l4b_C TRKA K+ channel protien 92.0 0.12 4.1E-06 47.4 4.3 32 81-118 2-33 (218)
398 4dgk_A Phytoene dehydrogenase; 91.9 0.074 2.5E-06 55.5 3.1 34 245-281 2-35 (501)
399 3ado_A Lambda-crystallin; L-gu 91.5 0.13 4.5E-06 50.2 4.1 36 78-119 5-40 (319)
400 3i83_A 2-dehydropantoate 2-red 91.5 0.18 6.1E-06 49.4 5.2 34 79-118 2-35 (320)
401 3doj_A AT3G25530, dehydrogenas 91.4 0.2 6.9E-06 48.8 5.4 38 76-119 18-55 (310)
402 3p2y_A Alanine dehydrogenase/p 91.3 0.15 5.3E-06 50.8 4.5 35 78-118 183-217 (381)
403 4e12_A Diketoreductase; oxidor 91.3 0.23 7.8E-06 47.7 5.6 35 79-119 4-38 (283)
404 4ffl_A PYLC; amino acid, biosy 91.1 0.21 7.2E-06 49.7 5.3 35 79-119 1-35 (363)
405 3e8x_A Putative NAD-dependent 90.8 0.23 7.7E-06 46.0 5.0 36 77-118 19-55 (236)
406 3vtf_A UDP-glucose 6-dehydroge 90.8 0.25 8.6E-06 50.5 5.6 39 74-118 16-54 (444)
407 2dpo_A L-gulonate 3-dehydrogen 90.8 0.17 5.8E-06 49.6 4.1 35 79-119 6-40 (319)
408 3oj0_A Glutr, glutamyl-tRNA re 90.8 0.17 5.7E-06 43.1 3.7 34 79-118 21-54 (144)
409 2a9f_A Putative malic enzyme ( 90.7 0.2 6.8E-06 50.0 4.6 35 78-118 187-222 (398)
410 3ius_A Uncharacterized conserv 90.6 0.23 7.9E-06 47.3 4.9 35 78-118 4-38 (286)
411 1pzg_A LDH, lactate dehydrogen 90.4 0.28 9.5E-06 48.3 5.4 34 80-119 10-44 (331)
412 3gg2_A Sugar dehydrogenase, UD 90.3 0.26 8.8E-06 50.8 5.2 33 80-118 3-35 (450)
413 2hjr_A Malate dehydrogenase; m 90.2 0.3 1E-05 48.0 5.4 36 78-119 13-49 (328)
414 1lld_A L-lactate dehydrogenase 90.2 0.28 9.4E-06 47.9 5.2 33 80-118 8-42 (319)
415 2pyx_A Tryptophan halogenase; 90.2 0.17 5.9E-06 53.2 3.9 37 244-280 7-52 (526)
416 1x13_A NAD(P) transhydrogenase 90.1 0.28 9.5E-06 49.7 5.2 35 79-119 172-206 (401)
417 3hn2_A 2-dehydropantoate 2-red 90.0 0.2 7E-06 48.8 4.0 33 80-118 3-35 (312)
418 1vl6_A Malate oxidoreductase; 89.9 0.26 8.9E-06 49.1 4.6 34 78-117 191-225 (388)
419 2ew2_A 2-dehydropantoate 2-red 89.8 0.3 1E-05 47.3 5.1 33 80-118 4-36 (316)
420 1l7d_A Nicotinamide nucleotide 89.8 0.34 1.2E-05 48.8 5.5 36 78-119 171-206 (384)
421 2raf_A Putative dinucleotide-b 89.7 0.37 1.2E-05 43.9 5.2 36 78-119 18-53 (209)
422 2ewd_A Lactate dehydrogenase,; 89.7 0.31 1.1E-05 47.6 5.0 35 79-119 4-39 (317)
423 4hv4_A UDP-N-acetylmuramate--L 89.6 0.39 1.3E-05 50.1 6.0 51 244-308 22-73 (494)
424 4hv4_A UDP-N-acetylmuramate--L 89.6 0.33 1.1E-05 50.7 5.4 35 78-118 21-56 (494)
425 3nrn_A Uncharacterized protein 89.4 0.24 8.3E-06 50.3 4.1 35 245-282 1-35 (421)
426 1t2d_A LDH-P, L-lactate dehydr 89.3 0.42 1.4E-05 46.8 5.6 35 79-119 4-39 (322)
427 1ur5_A Malate dehydrogenase; o 89.1 0.4 1.4E-05 46.6 5.3 33 80-118 3-36 (309)
428 1pjc_A Protein (L-alanine dehy 89.1 0.4 1.4E-05 47.8 5.3 34 79-118 167-200 (361)
429 1ks9_A KPA reductase;, 2-dehyd 89.0 0.4 1.4E-05 45.8 5.2 33 81-119 2-34 (291)
430 3g79_A NDP-N-acetyl-D-galactos 88.9 0.37 1.3E-05 49.9 5.1 35 79-119 18-54 (478)
431 2vvm_A Monoamine oxidase N; FA 88.8 0.66 2.3E-05 48.1 7.1 56 288-372 255-311 (495)
432 3ka7_A Oxidoreductase; structu 88.6 0.28 9.5E-06 49.8 4.0 34 246-282 2-35 (425)
433 3dtt_A NADP oxidoreductase; st 88.6 0.47 1.6E-05 44.4 5.2 37 77-119 17-53 (245)
434 3gvi_A Malate dehydrogenase; N 88.5 0.49 1.7E-05 46.3 5.4 35 79-119 7-42 (324)
435 2y0c_A BCEC, UDP-glucose dehyd 88.4 0.42 1.5E-05 49.5 5.2 34 79-118 8-41 (478)
436 1bg6_A N-(1-D-carboxylethyl)-L 88.4 0.45 1.5E-05 47.1 5.2 33 80-118 5-37 (359)
437 4gde_A UDP-galactopyranose mut 88.3 0.38 1.3E-05 50.1 4.9 35 245-282 11-46 (513)
438 3g3e_A D-amino-acid oxidase; F 88.3 0.43 1.5E-05 47.0 5.0 32 246-280 2-39 (351)
439 3ihm_A Styrene monooxygenase A 88.3 0.28 9.5E-06 50.2 3.7 33 245-280 23-55 (430)
440 3qha_A Putative oxidoreductase 88.2 0.37 1.3E-05 46.6 4.3 35 79-119 15-49 (296)
441 1jw9_B Molybdopterin biosynthe 88.2 0.4 1.4E-05 45.1 4.4 34 79-118 31-65 (249)
442 2v6b_A L-LDH, L-lactate dehydr 88.2 0.46 1.6E-05 46.1 5.0 33 80-118 1-35 (304)
443 3dme_A Conserved exported prot 88.1 0.34 1.1E-05 47.8 4.1 35 245-282 5-39 (369)
444 3k6j_A Protein F01G10.3, confi 87.8 0.67 2.3E-05 47.6 6.1 36 78-119 53-88 (460)
445 2eez_A Alanine dehydrogenase; 87.8 0.54 1.8E-05 47.0 5.3 34 79-118 166-199 (369)
446 2pv7_A T-protein [includes: ch 87.8 0.68 2.3E-05 44.7 5.9 35 78-118 20-55 (298)
447 2b9w_A Putative aminooxidase; 87.7 0.39 1.3E-05 48.7 4.4 36 244-282 6-42 (424)
448 1y6j_A L-lactate dehydrogenase 87.7 0.54 1.8E-05 45.9 5.2 34 79-118 7-42 (318)
449 1guz_A Malate dehydrogenase; o 87.7 0.59 2E-05 45.5 5.4 35 81-119 2-36 (310)
450 3r6d_A NAD-dependent epimerase 87.7 0.7 2.4E-05 42.1 5.7 35 78-118 4-40 (221)
451 3g17_A Similar to 2-dehydropan 87.7 0.28 9.7E-06 47.3 3.2 34 79-118 2-35 (294)
452 3ghy_A Ketopantoate reductase 87.6 0.49 1.7E-05 46.5 4.9 32 80-117 4-35 (335)
453 3g0o_A 3-hydroxyisobutyrate de 87.5 0.57 2E-05 45.3 5.2 34 79-118 7-40 (303)
454 1z82_A Glycerol-3-phosphate de 87.5 0.55 1.9E-05 46.1 5.2 35 78-118 13-47 (335)
455 2aef_A Calcium-gated potassium 87.5 0.33 1.1E-05 45.0 3.3 35 78-119 8-42 (234)
456 2x5o_A UDP-N-acetylmuramoylala 87.4 0.17 5.8E-06 52.0 1.4 52 244-309 5-56 (439)
457 3tl2_A Malate dehydrogenase; c 87.4 0.63 2.1E-05 45.4 5.4 34 79-118 8-42 (315)
458 1zcj_A Peroxisomal bifunctiona 87.3 0.66 2.2E-05 47.9 5.8 35 79-119 37-71 (463)
459 3k7m_X 6-hydroxy-L-nicotine ox 87.2 0.37 1.3E-05 48.9 3.9 34 246-282 3-36 (431)
460 2pzm_A Putative nucleotide sug 87.2 0.75 2.6E-05 44.9 6.0 36 77-118 18-54 (330)
461 3pef_A 6-phosphogluconate dehy 87.2 0.57 2E-05 44.8 5.0 34 80-119 2-35 (287)
462 3gpi_A NAD-dependent epimerase 87.2 0.59 2E-05 44.5 5.1 35 79-119 3-37 (286)
463 4a7p_A UDP-glucose dehydrogena 87.2 0.54 1.9E-05 48.2 5.0 35 79-119 8-42 (446)
464 2i6t_A Ubiquitin-conjugating e 87.1 0.51 1.7E-05 45.7 4.6 34 79-118 14-49 (303)
465 1nyt_A Shikimate 5-dehydrogena 87.1 0.65 2.2E-05 44.2 5.3 35 78-118 118-152 (271)
466 3cgv_A Geranylgeranyl reductas 87.1 0.41 1.4E-05 47.8 4.1 99 246-373 6-162 (397)
467 3l9w_A Glutathione-regulated p 87.0 0.52 1.8E-05 47.9 4.8 35 79-119 4-38 (413)
468 3dhn_A NAD-dependent epimerase 87.0 0.6 2.1E-05 42.6 4.9 35 79-119 4-39 (227)
469 4dll_A 2-hydroxy-3-oxopropiona 86.9 0.58 2E-05 45.7 4.9 35 78-118 30-64 (320)
470 2vhw_A Alanine dehydrogenase; 86.8 0.66 2.3E-05 46.5 5.3 35 78-118 167-201 (377)
471 2e1m_A L-glutamate oxidase; L- 86.7 0.48 1.7E-05 47.4 4.2 36 244-282 44-80 (376)
472 3k96_A Glycerol-3-phosphate de 86.7 0.63 2.1E-05 46.3 5.0 34 79-118 29-62 (356)
473 2vns_A Metalloreductase steap3 86.6 0.6 2.1E-05 42.7 4.6 34 79-118 28-61 (215)
474 4id9_A Short-chain dehydrogena 86.6 0.54 1.9E-05 46.1 4.6 38 76-119 16-54 (347)
475 4ezb_A Uncharacterized conserv 86.6 0.58 2E-05 45.7 4.7 35 78-118 23-58 (317)
476 3fwz_A Inner membrane protein 86.5 1.4 4.8E-05 37.0 6.5 50 244-308 7-56 (140)
477 3p1w_A Rabgdi protein; GDI RAB 86.3 0.81 2.8E-05 47.3 5.8 57 288-372 256-313 (475)
478 3phh_A Shikimate dehydrogenase 86.3 0.8 2.7E-05 43.4 5.3 35 79-119 118-152 (269)
479 2jae_A L-amino acid oxidase; o 86.3 0.54 1.9E-05 48.7 4.6 37 244-283 11-47 (489)
480 3q2o_A Phosphoribosylaminoimid 86.2 0.93 3.2E-05 45.5 6.2 37 77-119 12-48 (389)
481 2h78_A Hibadh, 3-hydroxyisobut 86.1 0.62 2.1E-05 44.9 4.6 34 79-118 3-36 (302)
482 1hdo_A Biliverdin IX beta redu 86.1 0.86 3E-05 40.6 5.3 33 80-118 4-37 (206)
483 3i83_A 2-dehydropantoate 2-red 86.1 0.93 3.2E-05 44.2 5.9 45 245-306 3-47 (320)
484 3p7m_A Malate dehydrogenase; p 86.0 0.86 3E-05 44.5 5.6 35 79-119 5-40 (321)
485 1ldn_A L-lactate dehydrogenase 85.9 0.74 2.5E-05 44.9 5.1 37 78-118 5-41 (316)
486 1c0p_A D-amino acid oxidase; a 85.9 0.53 1.8E-05 46.6 4.1 32 245-279 7-38 (363)
487 2egg_A AROE, shikimate 5-dehyd 85.9 0.82 2.8E-05 44.1 5.3 35 78-118 140-175 (297)
488 1mv8_A GMD, GDP-mannose 6-dehy 85.7 0.62 2.1E-05 47.7 4.5 32 81-118 2-33 (436)
489 1rsg_A FMS1 protein; FAD bindi 85.6 0.5 1.7E-05 49.5 3.9 36 245-283 9-45 (516)
490 3d0o_A L-LDH 1, L-lactate dehy 85.5 0.75 2.6E-05 44.9 4.9 36 79-118 6-41 (317)
491 3qvo_A NMRA family protein; st 85.5 0.65 2.2E-05 42.9 4.3 37 77-119 21-59 (236)
492 2o3j_A UDP-glucose 6-dehydroge 85.3 0.7 2.4E-05 48.0 4.8 36 79-118 9-44 (481)
493 2q3e_A UDP-glucose 6-dehydroge 85.2 0.65 2.2E-05 48.0 4.5 35 80-118 6-40 (467)
494 2g1u_A Hypothetical protein TM 85.2 0.83 2.8E-05 39.1 4.5 34 244-280 19-52 (155)
495 1vpd_A Tartronate semialdehyde 85.2 0.72 2.5E-05 44.3 4.5 33 80-118 6-38 (299)
496 3hwr_A 2-dehydropantoate 2-red 85.1 0.87 3E-05 44.4 5.1 35 77-118 17-51 (318)
497 3ew7_A LMO0794 protein; Q8Y8U8 85.0 0.96 3.3E-05 40.9 5.2 32 81-118 2-34 (221)
498 1s3e_A Amine oxidase [flavin-c 84.9 0.53 1.8E-05 49.3 3.7 35 245-282 5-39 (520)
499 4gbj_A 6-phosphogluconate dehy 84.9 0.63 2.2E-05 44.9 4.0 37 77-119 3-39 (297)
500 1jay_A Coenzyme F420H2:NADP+ o 84.9 0.95 3.3E-05 40.9 5.0 32 81-118 2-34 (212)
No 1
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=1.7e-60 Score=507.31 Aligned_cols=399 Identities=21% Similarity=0.354 Sum_probs=325.2
Q ss_pred CCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhc--cCCcE
Q 009310 76 DKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLA--NTGVQ 153 (538)
Q Consensus 76 ~~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~--~~~v~ 153 (538)
...+++|||||||+||+++|..|++ .+++|||||++++|.|+|+++++..|.+++.++..+++.+.. +.+++
T Consensus 39 ~~~KprVVIIGgG~AGl~~A~~L~~------~~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~ 112 (502)
T 4g6h_A 39 HSDKPNVLILGSGWGAISFLKHIDT------KKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVT 112 (502)
T ss_dssp SCSSCEEEEECSSHHHHHHHHHSCT------TTCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEE
T ss_pred CCCCCCEEEECCcHHHHHHHHHhhh------CCCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcCCeE
Confidence 3456799999999999999999987 678999999999999999999999999999999889887753 45799
Q ss_pred EEEeeEEEEcCCCCcCcCCCceeeccc-------------EEEcCCceEEEeeEEEEeCCCCCCCCCCCCccccCcCCCC
Q 009310 154 FFKDRVKLLCPSDHLGVNGPMACTHGG-------------TVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFST 220 (538)
Q Consensus 154 ~~~~~v~~i~~~~~~~~~~~~~~~~~~-------------~v~~~~g~~~~yD~lVlAtG~~~~~p~ipG~~~~~~~~~~ 220 (538)
|++++|++||++.+. +.+... .....++.++.||+||||||+.|+.+++||+.++.+.+++
T Consensus 113 ~~~~~v~~ID~~~k~------V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~ipG~~e~a~~l~t 186 (502)
T 4g6h_A 113 YYEAEATSINPDRNT------VTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVTDYGHFLKE 186 (502)
T ss_dssp EEEEEEEEEEGGGTE------EEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTTCTTHHHHCEECSS
T ss_pred EEEEEEEEEEhhhCE------EEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCCccCcccccCCCCC
Confidence 999999999987663 111000 0112346689999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHH-HHHhccCC------CCCCeEEEECCChhHHHHHHHHHHHHHh-----------cCcEEEEecCCcc
Q 009310 221 LEDACRVDRKLSE-LERRNFGK------DSLIRVAVVGCGYSGVELAATVSERLEE-----------KGIVQAINVETTI 282 (538)
Q Consensus 221 ~~d~~~~~~~l~~-~~~~~~~~------~~~~~VvVVGgG~~g~E~A~~l~~~~~~-----------~~~Vtlv~~~~~~ 282 (538)
.+|+.++++.+.. ++...... ....+++|||||++|+|+|.+|++++.+ ...|++++..+++
T Consensus 187 ~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~i 266 (502)
T 4g6h_A 187 IPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIV 266 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSS
T ss_pred HHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEecccccc
Confidence 9999999887533 33221110 1135899999999999999999887642 2349999999999
Q ss_pred CCCCChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEec
Q 009310 283 CPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEA 362 (538)
Q Consensus 283 l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~ 362 (538)
++.+++++.+.+.+.|+++||++++++.|+++++ +.+.+.....+....++++++
T Consensus 267 l~~~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~-------------------------~~~~~~~~~~dg~~~~~~i~a 321 (502)
T 4g6h_A 267 LNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEE-------------------------KQLLAKTKHEDGKITEETIPY 321 (502)
T ss_dssp STTSCHHHHHHHHHHHHHTTCEEETTEEEEEECS-------------------------SEEEEEEECTTSCEEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHhcceeeecCceEEEEeC-------------------------CceEEEEEecCcccceeeecc
Confidence 9999999999999999999999999999999987 444444321111113457999
Q ss_pred cEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHH
Q 009310 363 DLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAG 442 (538)
Q Consensus 363 D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa 442 (538)
|+||||+|.+|+ ++...+.. ..+...+.+|+|.||++||++++|||||+|||+.. +.|++++.|.+||+++|
T Consensus 322 d~viwa~Gv~~~-~~~~~l~~-~~~~~~~~~g~I~Vd~~lq~~~~~~IfAiGD~a~~------~~p~~a~~A~qqg~~~A 393 (502)
T 4g6h_A 322 GTLIWATGNKAR-PVITDLFK-KIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAFA------GLPPTAQVAHQEAEYLA 393 (502)
T ss_dssp SEEEECCCEECC-HHHHHHHH-HSGGGTTCCSSEEBCTTSBBTTCSSEEECGGGEES------SSCCCHHHHHHHHHHHH
T ss_pred CEEEEccCCcCC-HHHHhHHH-hccccccCCCceeECCccccCCCCCEEEEEcccCC------CCCCchHHHHHHHHHHH
Confidence 999999999998 33221110 12455678899999999999999999999999987 56899999999999999
Q ss_pred HHHHHH--------------------HCCCCCCCceecCcccEEEecCCCeeecCCc--cCCeEEecHHHHHHHHhhhhh
Q 009310 443 WNLWAA--------------------INDRPLLPFRFQNLGEMMILGRNDAAVSPSF--VEGVTLDGPIGHSARKLAYLI 500 (538)
Q Consensus 443 ~~i~~~--------------------l~~~~~~p~~~~~~g~~~~lG~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~ 500 (538)
+||.+. +.+++++||.|.++|+|++||++.|+++... ..++.+.|+++|++|+.+|++
T Consensus 394 ~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~y~~~G~~a~lG~~~av~~~~~~~~~~~~~~G~~a~~~w~~~yl~ 473 (502)
T 4g6h_A 394 KNFDKMAQIPNFQKNLSSRKDKIDLLFEENNFKPFKYNDLGALAYLGSERAIATIRSGKRTFYTGGGLMTFYLWRILYLS 473 (502)
T ss_dssp HHHHHHTTCHHHHHHTTSSSCCHHHHHHHTTCCCCCCCCCEEEEECSTTCEEEEEEETTEEEEEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHhccchhhhhhhhccchhhhhhcCCCCCCCEecCcceEEEEeCCceEEEccCCCccceecccHHHHHHHHHHHHH
Confidence 999763 4567889999999999999999999987421 123667899999999999999
Q ss_pred cCCCcchhHHHHHhhhhhH
Q 009310 501 RLPTDEHRLKVGVSWLTKS 519 (538)
Q Consensus 501 ~~~~~~~~~~~~~~w~~~~ 519 (538)
++++++||++++++|++..
T Consensus 474 ~l~~~r~r~~v~~~W~~~~ 492 (502)
T 4g6h_A 474 MILSARSRLKVFFDWIKLA 492 (502)
T ss_dssp HCSCHHHHHHHHHHHHHHH
T ss_pred HccchhhhHHHHHHHHHHH
Confidence 9999999999999999654
No 2
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=100.00 E-value=3.4e-50 Score=421.45 Aligned_cols=382 Identities=20% Similarity=0.223 Sum_probs=308.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEee
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKDR 158 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~ 158 (538)
.|+|||||||+||++||.+|++++ ++++|||||+++++.|+|+++.+..|..+++++..++++++++.+++|++++
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~----~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~~ 77 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLM----PDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEK 77 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHC----TTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECSC
T ss_pred CCcEEEECCCHHHHHHHHHHhccC----cCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEeE
Confidence 479999999999999999999854 5789999999999999999999999999999999999999988899999999
Q ss_pred EEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCCCCCCccccCcCCCChHHHHHHHHHHHHHHHhc
Q 009310 159 VKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRN 238 (538)
Q Consensus 159 v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~ 238 (538)
|+.||++.+ +|++++|+++.||+||||||+++. +++||..++.+.+++.+++.++++.+..+...
T Consensus 78 v~~Id~~~~-------------~V~~~~g~~i~YD~LViAtG~~~~-~~i~G~~e~~~~~~~~~~a~~~~~~l~~~~~~- 142 (430)
T 3hyw_A 78 AESIDPDAN-------------TVTTQSGKKIEYDYLVIATGPKLV-FGAEGQEENSTSICTAEHALETQKKLQELYAN- 142 (430)
T ss_dssp EEEEETTTT-------------EEEETTCCEEECSEEEECCCCEEE-CCSBTHHHHSCCCSSHHHHHHHHHHHHHHHHS-
T ss_pred EEEEECCCC-------------EEEECCCCEEECCEEEEeCCCCcc-CCccCcccCcCCcccHHHHHHHHHHHHhhccC-
Confidence 999999887 589999999999999999999864 56999988999999999999999988776553
Q ss_pred cCCCCCCeEEEECCC------hhHHHHHHHHHHHHHhcC-----cEEEEecCCccCC---CCChhhHHHHHHHHHhCCCE
Q 009310 239 FGKDSLIRVAVVGCG------YSGVELAATVSERLEEKG-----IVQAINVETTICP---TGTPGNREAALKVLSARKVQ 304 (538)
Q Consensus 239 ~~~~~~~~VvVVGgG------~~g~E~A~~l~~~~~~~~-----~Vtlv~~~~~~l~---~~~~~~~~~~~~~l~~~gV~ 304 (538)
+.++|+|++ ..+.|++..+.....+.+ .|++++..+.+.. ...+...+.+.+.++++||+
T Consensus 143 ------~~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~l~~~GV~ 216 (430)
T 3hyw_A 143 ------PGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNID 216 (430)
T ss_dssp ------CCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCE
T ss_pred ------CceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhcccccceeeeecccchhhhccchhhHHHHHHHHHHHHhCCeE
Confidence 355566554 244567766666555432 3888887765433 34567778899999999999
Q ss_pred EEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCc
Q 009310 305 LVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNR 384 (538)
Q Consensus 305 v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~ 384 (538)
+++++.|++++. +.++++.. .++++++++|++||++|.+|+ +++...+
T Consensus 217 ~~~~~~v~~v~~-------------------------~~~~~~~~----~g~~~~i~~d~vi~~~G~~~~-~~~~~~~-- 264 (430)
T 3hyw_A 217 WIANVAVKAIEP-------------------------DKVIYEDL----NGNTHEVPAKFTMFMPSFQGP-EVVASAG-- 264 (430)
T ss_dssp EECSCEEEEECS-------------------------SEEEEECT----TSCEEEEECSEEEEECEEECC-HHHHTTC--
T ss_pred EEeCceEEEEeC-------------------------CceEEEee----CCCceEeecceEEEeccCCCc-hHHHhcc--
Confidence 999999999987 55666532 235678999999999999998 4444332
Q ss_pred cCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCC----CCCccHHHHHHHHHHHHHHHHHHHCCCCCCCceec
Q 009310 385 LHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGR----PLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQ 460 (538)
Q Consensus 385 ~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~----~~~~~~~~A~~qg~~aa~~i~~~l~~~~~~p~~~~ 460 (538)
..+..+.+|+|.||++||++++|||||+|||+..++..+. ..|++++.|.+||+++|+||.+.++|++++++.+.
T Consensus 265 -~~l~~~~~g~i~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g~~~~~~~~~ 343 (430)
T 3hyw_A 265 -DKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPDKYAPRL 343 (430)
T ss_dssp -TTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCCCCEEECC
T ss_pred -cccccCCceEEEecccccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCcccCC
Confidence 1244456788999999997799999999999998765443 35789999999999999999999999987665555
Q ss_pred CcccEEEecCCCeeecCC-----ccCCeEEecHHHH---------HHHHhhhhhcCCCcchhHHHHHhhhhh
Q 009310 461 NLGEMMILGRNDAAVSPS-----FVEGVTLDGPIGH---------SARKLAYLIRLPTDEHRLKVGVSWLTK 518 (538)
Q Consensus 461 ~~g~~~~lG~~~~~~~~~-----~~~~~~~~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~w~~~ 518 (538)
+.++++++|.+.+++... ....+...|.++| ++|+..++..+|.|+||+.+.++|+..
T Consensus 344 ~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~K~~~~~~~~w~~~~~~~~~~~~~~~~~~~~w~~~ 415 (430)
T 3hyw_A 344 SAICIADFGEDAGFFFADPVIPPRERVITKMGKWAHYFKTAFEKYFLWKVRNGNIAPSFEEKVLEIFLKVHP 415 (430)
T ss_dssp CEEEEEECSSSEEEEEEESSSSSCSEEEEEEEHHHHHHHHHHHHHHHHHHHHTCSSCHHHHHHHHHHHCCCS
T ss_pred cEEEEEEcCCCcEEEEEcccCCccccccccccHHHHHHHHHHHHHHHHHHHHhCccHhHHHHHHHHHhcccc
Confidence 668899999998886421 1112455576655 456666677889999999999999854
No 3
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=100.00 E-value=1e-44 Score=380.84 Aligned_cols=367 Identities=20% Similarity=0.191 Sum_probs=294.3
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEee
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKDR 158 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~ 158 (538)
+++|||||||+||+++|..|++... ++++|+|||+++++.|.|.++.+..+....+++..++.+++++.+++++.++
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~---~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~~~ 80 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALG---SGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIAQS 80 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHG---GGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEECSC
T ss_pred CCcEEEECCcHHHHHHHHHHhccCC---CcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEEeE
Confidence 4799999999999999999988321 5789999999999999999999888988888888899999988999999999
Q ss_pred EEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCCCCCCccc---cCcCCCChHHHHHHHHHHHHHH
Q 009310 159 VKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAE---FAFPFSTLEDACRVDRKLSELE 235 (538)
Q Consensus 159 v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p~ipG~~~---~~~~~~~~~d~~~~~~~l~~~~ 235 (538)
|+.++++.+ .|.++++..+.||+||+|||+.|+.|.+||+.+ +.+.+++.+++..+++.+..+.
T Consensus 81 v~~id~~~~-------------~V~~~~g~~i~~d~lviAtG~~~~~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 147 (437)
T 3sx6_A 81 AEQIDAEAQ-------------NITLADGNTVHYDYLMIATGPKLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQALL 147 (437)
T ss_dssp EEEEETTTT-------------EEEETTSCEEECSEEEECCCCEECGGGSTTCSTTTSSEECCSSHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCC-------------EEEECCCCEEECCEEEECCCCCcCcccCCCCCcccCcceecccccHHHHHHHHHHHHH
Confidence 999988765 588888888999999999999999999999864 5567889999999888776654
Q ss_pred HhccCCCCCCeEEEECCChhH------HHHHHHHHHHHHhcCc------EEEEecCCccCC----CCChhhHHHHHHHHH
Q 009310 236 RRNFGKDSLIRVAVVGCGYSG------VELAATVSERLEEKGI------VQAINVETTICP----TGTPGNREAALKVLS 299 (538)
Q Consensus 236 ~~~~~~~~~~~VvVVGgG~~g------~E~A~~l~~~~~~~~~------Vtlv~~~~~~l~----~~~~~~~~~~~~~l~ 299 (538)
.. ++++|||+|+.+ +|+|.++++...+.+. |+++++.+.+.+ .+ +...+.+.+.|+
T Consensus 148 ~~-------~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~l~~~-~~~~~~~~~~l~ 219 (437)
T 3sx6_A 148 RE-------PGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGV-GDSKGILTKGLK 219 (437)
T ss_dssp HS-------CCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCTTTTCC-TTHHHHHHHHHH
T ss_pred hC-------CCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccccccccCcc-hHHHHHHHHHHH
Confidence 32 367888886554 9999988887776552 999999887733 33 357788899999
Q ss_pred hCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCC--cceEEeccEEEEecCCCCCCCC
Q 009310 300 ARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGL--ESQIFEADLVLWTVGSKPLLPH 377 (538)
Q Consensus 300 ~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~g~~l~~D~vI~a~G~~p~~~~ 377 (538)
++||++++++.|+++++ +.++++.... ++. +++++++|++++++|++|+..+
T Consensus 220 ~~gI~~~~~~~v~~v~~-------------------------~~v~~~~~~~-~g~~~~~~~i~~D~vv~~~g~~~~~~~ 273 (437)
T 3sx6_A 220 EEGIEAYTNCKVTKVED-------------------------NKMYVTQVDE-KGETIKEMVLPVKFGMMIPAFKGVPAV 273 (437)
T ss_dssp HTTCEEECSEEEEEEET-------------------------TEEEEEEECT-TSCEEEEEEEECSEEEEECCEECCHHH
T ss_pred HCCCEEEcCCEEEEEEC-------------------------CeEEEEeccc-CCccccceEEEEeEEEEcCCCcCchhh
Confidence 99999999999999987 4455542110 110 1678999999999999988443
Q ss_pred CCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCCC----CCccHHHHHHHHHHHHHHHHHHHCCCC
Q 009310 378 VEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRP----LPATAQVAFQQADFAGWNLWAAINDRP 453 (538)
Q Consensus 378 l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~----~~~~~~~A~~qg~~aa~~i~~~l~~~~ 453 (538)
.... ++ .+++|+|.||+++|++++|||||+|||+..+++.+.+ .|++++.|..||+.+|+||.+.+.|++
T Consensus 274 ~~~~-----gl-~~~~G~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g~~ 347 (437)
T 3sx6_A 274 AGVE-----GL-CNPGGFVLVDEHQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEGRK 347 (437)
T ss_dssp HTST-----TT-BCTTSCBCBCTTSBBSSCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred hccc-----cc-cCCCCcEEeChhccCCCCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 3222 34 6788999999999998999999999999986654443 478999999999999999999999999
Q ss_pred CCCceecCc-ccEEEecCCCeeecC-----CccCCeEEecHHHHHHHHhhhhhc
Q 009310 454 LLPFRFQNL-GEMMILGRNDAAVSP-----SFVEGVTLDGPIGHSARKLAYLIR 501 (538)
Q Consensus 454 ~~p~~~~~~-g~~~~lG~~~~~~~~-----~~~~~~~~~g~~~~~~~~~~~~~~ 501 (538)
+.+|.+... .+++++|...++... +....+.+.|.++|++|..+...+
T Consensus 348 ~~~~~~~~~~~~~~~~G~~~~~~~~~~~~p~~~~~~~~~g~~~~~~K~~~~~~f 401 (437)
T 3sx6_A 348 GEQTMGTWNAVAFADMGDRGAAFIALPQLKPRKVDVFAYGRWVHLAKVAFEKYF 401 (437)
T ss_dssp CCCCCCSCCEEEEEECSSCEEEEEEESSSSSCSEEEEEEEHHHHHHHHHHHHHH
T ss_pred CCCcccCcceEEEEEeCCCceEEEeCCCCCCcccccccccHHHHHHHHHHHHHH
Confidence 888766554 455669988766421 122457889999999887654433
No 4
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=100.00 E-value=7.4e-43 Score=366.04 Aligned_cols=364 Identities=20% Similarity=0.243 Sum_probs=287.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEee
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKDR 158 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~ 158 (538)
+++|||||||+||+++|..|++++ ++++|+|||+++++.|.|.++....+....+++..++.+++++.+++++.++
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~----~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~~ 77 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLM----PDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEK 77 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHC----TTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECSC
T ss_pred CCCEEEECccHHHHHHHHHHHcCC----CCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEEE
Confidence 479999999999999999999843 6899999999999999999888888888888888888888888899999999
Q ss_pred EEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCCCCCCccccCcCCCChHHHHHHHHHHHHHHHhc
Q 009310 159 VKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRN 238 (538)
Q Consensus 159 v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~ 238 (538)
++.++++.+ .+.++++..+.||+||+|||+.+..|.+.. ..+...+++.+++..+++.+..+...
T Consensus 78 v~~id~~~~-------------~v~~~~g~~i~~d~liiAtG~~~~~pg~~~-~g~~~~~~~~~~a~~~~~~~~~~~~~- 142 (430)
T 3h28_A 78 AESIDPDAN-------------TVTTQSGKKIEYDYLVIATGPKLVFGAEGQ-EENSTSICTAEHALETQKKLQELYAN- 142 (430)
T ss_dssp EEEEETTTT-------------EEEETTCCEEECSEEEECCCCEEECCSBTH-HHHSCCCSSHHHHHHHHHHHHHHHHS-
T ss_pred EEEEECCCC-------------EEEECCCcEEECCEEEEcCCcccccCCCCC-cCCccCcCCHHHHHHHHHHHHHHHhc-
Confidence 999988765 578888888999999999999876653221 23456788999999888877665432
Q ss_pred cCCCCCCeEEEECCChhH------HHHHHHHHHHHHhcC-----cEEEEecCCccCC----CCChhhHHHHHHHHHhCCC
Q 009310 239 FGKDSLIRVAVVGCGYSG------VELAATVSERLEEKG-----IVQAINVETTICP----TGTPGNREAALKVLSARKV 303 (538)
Q Consensus 239 ~~~~~~~~VvVVGgG~~g------~E~A~~l~~~~~~~~-----~Vtlv~~~~~~l~----~~~~~~~~~~~~~l~~~gV 303 (538)
++++|||+|+++ +|+|..+++...+.+ .|+++++.+.+.. .. +...+.+.+.|+++||
T Consensus 143 ------~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~l~~~-~~~~~~l~~~l~~~GV 215 (430)
T 3h28_A 143 ------PGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGI-GASKRLVEDLFAERNI 215 (430)
T ss_dssp ------CCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCS-TTHHHHHHHHHHHTTC
T ss_pred ------CCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCccccccccCcc-hHHHHHHHHHHHHCCC
Confidence 367888887654 999988877665443 4999999887632 22 3577888999999999
Q ss_pred EEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCC
Q 009310 304 QLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNN 383 (538)
Q Consensus 304 ~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~ 383 (538)
++++++.|++|+. +.++++.. .++++++++|+||+++|++|+. ++...+
T Consensus 216 ~i~~~~~v~~v~~-------------------------~~v~~~~~----~~~g~~i~~D~vv~a~G~~~~~-~l~~~~- 264 (430)
T 3h28_A 216 DWIANVAVKAIEP-------------------------DKVIYEDL----NGNTHEVPAKFTMFMPSFQGPE-VVASAG- 264 (430)
T ss_dssp EEECSCEEEEECS-------------------------SEEEEECT----TSCEEEEECSEEEEECEEECCH-HHHTTC-
T ss_pred EEEeCCEEEEEeC-------------------------CeEEEEec----CCCceEEeeeEEEECCCCccch-hHhhcc-
Confidence 9999999999987 44555411 1247899999999999999873 343320
Q ss_pred ccCCCCcCCCC-CeeeCCCcccCCCCCEEEccccccccCCCCCC----CCccHHHHHHHHHHHHHHHHHHHCCCCCCCce
Q 009310 384 RLHDLPLNARG-QAETDETLCVKGHPRIFALGDSSALRDSSGRP----LPATAQVAFQQADFAGWNLWAAINDRPLLPFR 458 (538)
Q Consensus 384 ~~~~~~l~~~G-~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~----~~~~~~~A~~qg~~aa~~i~~~l~~~~~~p~~ 458 (538)
.++ .+++| +|.||+++|++++|||||+|||+..+++.+.+ .|++++.|..||+.+|+||.+.+.|+++. +.
T Consensus 265 --~gl-~~~~G~~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~~~~-~~ 340 (430)
T 3h28_A 265 --DKV-ANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPDK-YA 340 (430)
T ss_dssp --TTT-BCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCCCC-EE
T ss_pred --ccC-cCCCCCEEecCccccCCCCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCCCC-Cc
Confidence 145 67889 99999999998999999999999986554443 47899999999999999999999999874 56
Q ss_pred ecCcc-cEEEecCCCeeecC-----CccCCeEEecHHHHHHHHhhhhhcCC
Q 009310 459 FQNLG-EMMILGRNDAAVSP-----SFVEGVTLDGPIGHSARKLAYLIRLP 503 (538)
Q Consensus 459 ~~~~g-~~~~lG~~~~~~~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~ 503 (538)
+.... +++.+|...++... +....+.+.|.+.|++|..+..+++.
T Consensus 341 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~K~~~~~~~~~ 391 (430)
T 3h28_A 341 PRLSAICIADFGEDAGFFFADPVIPPRERVITKMGKWAHYFKTAFEKYFLW 391 (430)
T ss_dssp ECCCEEEEEECSSSEEEEEEESSSSSCSEEEEEEEHHHHHHHHHHHHHHHH
T ss_pred CCcceEEEEEeCCCceEEEeCCCCCCccceeecccHHHHHHHHHHHHHHHH
Confidence 65554 55569987766421 12234688999999998876655543
No 5
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=3.8e-42 Score=354.49 Aligned_cols=309 Identities=18% Similarity=0.269 Sum_probs=259.2
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCccc-CcchhhhhcCCCCCccccccHHHHhccCCcEEE
Q 009310 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF-KPMLYELLSGEVDAWEIAPRFADLLANTGVQFF 155 (538)
Q Consensus 77 ~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~-~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 155 (538)
.++.||||||||+||++||..|.+ .+++|+|||++++++| .|.++.++.+..+.+++.....+++++.+++++
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~------~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~ 80 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALG------KCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVI 80 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTT------TCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEE
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhC------CCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEE
Confidence 455799999999999999999954 7889999999998766 677888888888888888888888888999999
Q ss_pred Ee-eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCCCCCCccccCcCCCChHHHHHHHHHHHHH
Q 009310 156 KD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSEL 234 (538)
Q Consensus 156 ~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~ 234 (538)
.+ +|+.++++.+ ++.++++..+.||+||||||+.|+.|++||.+ +++.+.+.+++..+++.+..
T Consensus 81 ~~~~V~~id~~~~-------------~v~~~~g~~~~yd~lvlAtG~~p~~p~i~G~~-~v~~~~~~~d~~~l~~~l~~- 145 (385)
T 3klj_A 81 TSEFATSIDPNNK-------------LVTLKSGEKIKYEKLIIASGSIANKIKVPHAD-EIFSLYSYDDALKIKDECKN- 145 (385)
T ss_dssp CSCCEEEEETTTT-------------EEEETTSCEEECSEEEECCCEEECCCCCTTCS-CEECCSSHHHHHHHHHHHHH-
T ss_pred eCCEEEEEECCCC-------------EEEECCCCEEECCEEEEecCCCcCCCCCCCCC-CeEEeCCHHHHHHHHHHhhc-
Confidence 86 8999998776 58888898999999999999999999999987 77888999999988877643
Q ss_pred HHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCC-CChhhHHHHHHHHHhCCCEEEcCceeeE
Q 009310 235 ERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT-GTPGNREAALKVLSARKVQLVLGYFVRC 313 (538)
Q Consensus 235 ~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~-~~~~~~~~~~~~l~~~gV~v~~~~~V~~ 313 (538)
+++|+|||+|.+|+|+|..|++.+.+ |+++++.+.+++. +++...+.+.+.+++.||++++++.+++
T Consensus 146 ---------~~~vvVIGgG~~g~E~A~~l~~~g~~---Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~ 213 (385)
T 3klj_A 146 ---------KGKAFIIGGGILGIELAQAIIDSGTP---ASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEE 213 (385)
T ss_dssp ---------HSCEEEECCSHHHHHHHHHHHHHTCC---EEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCGGG
T ss_pred ---------CCeEEEECCCHHHHHHHHHHHhCCCe---EEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEEEE
Confidence 57999999999999999999998766 9999999999886 7999999999999999999999987654
Q ss_pred EeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcCCC
Q 009310 314 IRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNAR 393 (538)
Q Consensus 314 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~ 393 (538)
+ ++++++|.||+|+|++|+++++... +++.+ +
T Consensus 214 i------------------------------------------g~~~~~D~vv~a~G~~p~~~~~~~~-----gl~~~-~ 245 (385)
T 3klj_A 214 M------------------------------------------GDLIRSSCVITAVGVKPNLDFIKDT-----EIASK-R 245 (385)
T ss_dssp C------------------------------------------HHHHHHSEEEECCCEEECCGGGTTS-----CCCBS-S
T ss_pred c------------------------------------------CeEEecCeEEECcCcccChhhhhhc-----CCCcC-C
Confidence 4 2357899999999999999888754 35554 3
Q ss_pred CCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHCCCC-CCCceecC-cc-cEEEecC
Q 009310 394 GQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRP-LLPFRFQN-LG-EMMILGR 470 (538)
Q Consensus 394 G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~~~~-~~p~~~~~-~g-~~~~lG~ 470 (538)
| |.||+++|+ +.|+|||+|||+..++ ..++.+..|..||+.+|.||.+...... ..|+.+.+ ++ .+.++|.
T Consensus 246 g-i~vd~~~~t-~~~~IyA~GD~a~~~~----~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~~G~ 319 (385)
T 3klj_A 246 G-ILVNDHMET-SIKDIYACGDVAEFYG----KNPGLINIANKQGEVAGLNACGEDASYSEIIPSPILKVSGISIISCGD 319 (385)
T ss_dssp S-EEECTTCBC-SSTTEEECGGGEEETT----BCCCCHHHHHHHHHHHHHHHTTCCCCCCCCCCCCEEEETTEEEEEESC
T ss_pred C-EEECCCccc-CCCCEEEEEeeEecCC----CcccHHHHHHHHHHHHHHHhcCCCcCCCCCCCcEEEEeCCCcEEEEcC
Confidence 4 999999999 9999999999998633 2367899999999999999986433322 23555544 33 5667885
Q ss_pred CC
Q 009310 471 ND 472 (538)
Q Consensus 471 ~~ 472 (538)
..
T Consensus 320 ~~ 321 (385)
T 3klj_A 320 IE 321 (385)
T ss_dssp CT
T ss_pred CC
Confidence 44
No 6
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=100.00 E-value=5.6e-42 Score=356.20 Aligned_cols=321 Identities=18% Similarity=0.200 Sum_probs=257.6
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEee
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKDR 158 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~ 158 (538)
.|||||||||+||++||.+|++.+ .+.+|+|||+++++++.|+++.++.|..+.+++..+++.+. +.+++|++++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~----~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~-~~gv~~i~~~ 76 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLAD----PSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLR-AHGIQVVHDS 76 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC----TTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHH-HTTCEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhcC----cCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHH-HCCCEEEEeE
Confidence 379999999999999999998854 57899999999999999999999999999888888888776 5789999999
Q ss_pred EEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCCCCCCcccc-----CcCCCChHHHHHHHHHHHH
Q 009310 159 VKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEF-----AFPFSTLEDACRVDRKLSE 233 (538)
Q Consensus 159 v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p~ipG~~~~-----~~~~~~~~d~~~~~~~l~~ 233 (538)
|+.||++.+ .+.+.++.++.||+||+|||++++.+.+||..+. .+.+++.+++..+++.+..
T Consensus 77 v~~id~~~~-------------~v~~~~g~~i~yd~LviAtG~~~~~~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~ 143 (401)
T 3vrd_B 77 ALGIDPDKK-------------LVKTAGGAEFAYDRCVVAPGIDLLYDKIEGYSEALAAKLPHAWKAGEQTALLRRQLES 143 (401)
T ss_dssp EEEEETTTT-------------EEEETTSCEEECSEEEECCCEEECGGGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHH
T ss_pred EEEEEccCc-------------EEEecccceeecceeeeccCCccccCCccCchhhcccCccceeccHHHHHHHHHHHHh
Confidence 999999877 5888899999999999999999999999997543 3557788899888888765
Q ss_pred HHHhccCCCCCCeEEEEC------CChhHHHHHHHHHHHHHhcC---cEEEEecCCccCC--CCChhhHHHHHHHHHhCC
Q 009310 234 LERRNFGKDSLIRVAVVG------CGYSGVELAATVSERLEEKG---IVQAINVETTICP--TGTPGNREAALKVLSARK 302 (538)
Q Consensus 234 ~~~~~~~~~~~~~VvVVG------gG~~g~E~A~~l~~~~~~~~---~Vtlv~~~~~~l~--~~~~~~~~~~~~~l~~~g 302 (538)
+.. +..+++++ ++..+.|++.+++...+..+ .|++++..+.+.. .+++.+.+.+.+.+++.|
T Consensus 144 ~~~-------~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 216 (401)
T 3vrd_B 144 MDD-------GGVVIIAPPAPPFRCPPGPYERASQIAHYLKAHKSKSKVIILDNSQTFSKQAQFTKGWERLYGFGTENAL 216 (401)
T ss_dssp SCT-------TCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHCTTCEEEEECSSSSCTTHHHHHHHHHHHSCTTSTTCS
T ss_pred ccc-------CCcEEEecCCccEEeehHHHHHHHHHHHHHHhcCCCCEEEEEcccccccccccccHHHHHHHHHHHHhcC
Confidence 432 23444443 34567777777776655322 4999988776532 334555555666678999
Q ss_pred CEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCC
Q 009310 303 VQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPN 382 (538)
Q Consensus 303 V~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~ 382 (538)
|+++++..+..++.+. +...+.+. +|+++++|++++++|.+|+ +++...
T Consensus 217 i~v~~~~~v~~v~~~~-----------------------~~~~v~~~------~g~~i~~D~vi~~~g~~~~-~~~~~~- 265 (401)
T 3vrd_B 217 IEWHPGPDAAVVKTDT-----------------------EAMTVETS------FGETFKAAVINLIPPQRAG-KIAQSA- 265 (401)
T ss_dssp EEEECTTTTCEEEEET-----------------------TTTEEEET------TSCEEECSEEEECCCEEEC-HHHHHT-
T ss_pred cEEEeCceEEEEEecc-----------------------cceEEEcC------CCcEEEeeEEEEecCcCCc-hhHhhc-
Confidence 9999999998887654 23334332 7889999999999999998 555543
Q ss_pred CccCCCCcCCCCCeeeCCC-cccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHCCCCCCCceecC
Q 009310 383 NRLHDLPLNARGQAETDET-LCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQN 461 (538)
Q Consensus 383 ~~~~~~~l~~~G~i~vd~~-l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~~~~~~p~~~~~ 461 (538)
++ .+++|+|.||++ ||++++|||||+|||+.. .+.|++++.|.+||+++|+||.+.++|+++.|+.|.+
T Consensus 266 ----gl-~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~-----~~~pk~a~~A~~qa~v~A~ni~~~l~G~~~~~~~y~~ 335 (401)
T 3vrd_B 266 ----SL-TNDSGWCPVDIRTFESSLQPGIHVIGDACNA-----APMPKSAYSANSQAKVAAAAVVALLKGEEPGTPSYLN 335 (401)
T ss_dssp ----TC-CCTTSSBCBCTTTCBBSSSTTEEECGGGBCC-----TTSCBSHHHHHHHHHHHHHHHHHHHHTCCCCCCCEEE
T ss_pred ----cc-cccCCCEEECCCcceecCCCCEEEecccccC-----CCCCchHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC
Confidence 34 578899999975 887799999999999863 2458999999999999999999999999888888876
Q ss_pred cccE
Q 009310 462 LGEM 465 (538)
Q Consensus 462 ~g~~ 465 (538)
+..+
T Consensus 336 ~~~~ 339 (401)
T 3vrd_B 336 TCYS 339 (401)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 6433
No 7
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=3.3e-41 Score=353.56 Aligned_cols=301 Identities=19% Similarity=0.270 Sum_probs=247.6
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC-cchhhhhcCCCCCcc--ccccHHHHhccCCcEEEE
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-PMLYELLSGEVDAWE--IAPRFADLLANTGVQFFK 156 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~-p~~~~~~~g~~~~~~--~~~~~~~~~~~~~v~~~~ 156 (538)
+|||||||||||++||.+|++++ .+.+|+|||+++++.|. +.++..+.+...... +......++++.+++++.
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g----~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 76 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLD----KESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITVKT 76 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHC----SSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCC----CCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEEEe
Confidence 47999999999999999999865 45799999999887775 456666655543322 233445666777899887
Q ss_pred e-eEEEEcCCCCcCcCCCceeecccEEE---cCCceEEEeeEEEEeCCCCCCCCCCCCccccCcCCCChHHHHHHHHHHH
Q 009310 157 D-RVKLLCPSDHLGVNGPMACTHGGTVL---LESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLS 232 (538)
Q Consensus 157 ~-~v~~i~~~~~~~~~~~~~~~~~~~v~---~~~g~~~~yD~lVlAtG~~~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~ 232 (538)
+ +|+.++...+. ..+. ..++..+.||+||||||++|+.|++|| +..+.+++.+++..+++.+.
T Consensus 77 ~~~V~~id~~~~~-----------~~~~~~~~~~~~~~~yd~lVIATGs~p~~p~i~g--~~~~~~~~~~~~~~l~~~~~ 143 (437)
T 4eqs_A 77 YHEVIAINDERQT-----------VSVLNRKTNEQFEESYDKLILSPGASANSLGFES--DITFTLRNLEDTDAIDQFIK 143 (437)
T ss_dssp TEEEEEEETTTTE-----------EEEEETTTTEEEEEECSEEEECCCEEECCCCCCC--TTEECCSSHHHHHHHHHHHH
T ss_pred CCeEEEEEccCcE-----------EEEEeccCCceEEEEcCEEEECCCCccccccccC--ceEEeeccHHHHHHHHHhhh
Confidence 4 89999887663 0111 123457899999999999999999998 45567889999888877654
Q ss_pred HHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEEcCceee
Q 009310 233 ELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVR 312 (538)
Q Consensus 233 ~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~ 312 (538)
... +++++|||||++|+|+|..+++.+.+ |+++++.+++++.++++..+.+.+.++++||++++++.|+
T Consensus 144 ~~~--------~~~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~ll~~~d~~~~~~~~~~l~~~gV~i~~~~~v~ 212 (437)
T 4eqs_A 144 ANQ--------VDKVLVVGAGYVSLEVLENLYERGLH---PTLIHRSDKINKLMDADMNQPILDELDKREIPYRLNEEIN 212 (437)
T ss_dssp HHT--------CCEEEEECCSHHHHHHHHHHHHHTCE---EEEEESSSCCSTTSCGGGGHHHHHHHHHTTCCEEESCCEE
T ss_pred ccC--------CcEEEEECCccchhhhHHHHHhcCCc---ceeeeeeccccccccchhHHHHHHHhhccceEEEeccEEE
Confidence 321 57999999999999999999998877 9999999999999999999999999999999999999999
Q ss_pred EEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcCC
Q 009310 313 CIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNA 392 (538)
Q Consensus 313 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~ 392 (538)
+++. +.++++ +++++++|.||+|+|.+||+++++.. ++++++
T Consensus 213 ~~~~-------------------------~~v~~~--------~g~~~~~D~vl~a~G~~Pn~~~~~~~-----gl~~~~ 254 (437)
T 4eqs_A 213 AING-------------------------NEITFK--------SGKVEHYDMIIEGVGTHPNSKFIESS-----NIKLDR 254 (437)
T ss_dssp EEET-------------------------TEEEET--------TSCEEECSEEEECCCEEESCGGGTTS-----SCCCCT
T ss_pred EecC-------------------------Ceeeec--------CCeEEeeeeEEEEeceecCcHHHHhh-----hhhhcc
Confidence 9876 456554 78899999999999999999887643 688899
Q ss_pred CCCeeeCCCcccCCCCCEEEccccccccCC-CCC-CCCccHHHHHHHHHHHHHHHHH
Q 009310 393 RGQAETDETLCVKGHPRIFALGDSSALRDS-SGR-PLPATAQVAFQQADFAGWNLWA 447 (538)
Q Consensus 393 ~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~-~~~-~~~~~~~~A~~qg~~aa~~i~~ 447 (538)
+|+|.||+++|| +.|||||+|||+..++. .+. ..++.++.|.+||+++|+||.+
T Consensus 255 ~G~I~vd~~~~T-s~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g 310 (437)
T 4eqs_A 255 KGFIPVNDKFET-NVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAG 310 (437)
T ss_dssp TSCEECCTTCBC-SSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHHS
T ss_pred CCcEecCCCccC-CCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHcC
Confidence 999999999999 99999999999987654 232 3467899999999999999985
No 8
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=1.1e-41 Score=354.79 Aligned_cols=325 Identities=21% Similarity=0.271 Sum_probs=261.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC--cchhhhhcCCCCCccccccHHHHhccCCcEEEE
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK--PMLYELLSGEVDAWEIAPRFADLLANTGVQFFK 156 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~--p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 156 (538)
+++|||||||+||++||..|++.+ ...+|+|||++++++|. ++...++.+....+.+ ....+++.+.+++++.
T Consensus 2 ~~~vvIIGaG~AGl~aA~~L~~~g----~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~-~~~~~~~~~~~i~~~~ 76 (410)
T 3ef6_A 2 ATHVAIIGNGVGGFTTAQALRAEG----FEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPI-LAEADWYGEARIDMLT 76 (410)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT----CCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCB-SSCTTHHHHTTCEEEE
T ss_pred CCCEEEEcccHHHHHHHHHHHccC----cCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHh-cCCHHHHHHCCCEEEe
Confidence 469999999999999999999943 23459999999988774 3445577777776666 5556667778999999
Q ss_pred e-eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCCCCCCcc-ccCcCCCChHHHHHHHHHHHHH
Q 009310 157 D-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAA-EFAFPFSTLEDACRVDRKLSEL 234 (538)
Q Consensus 157 ~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p~ipG~~-~~~~~~~~~~d~~~~~~~l~~~ 234 (538)
+ +++.+++..+ .+.++++..+.||+||+|||+.|+.|++||.. ++++.+.+.+++..+++.+.
T Consensus 77 ~~~v~~id~~~~-------------~v~~~~g~~~~~d~lvlAtG~~p~~~~ipG~~~~~v~~~~~~~d~~~l~~~~~-- 141 (410)
T 3ef6_A 77 GPEVTALDVQTR-------------TISLDDGTTLSADAIVIATGSRARTMALPGSQLPGVVTLRTYGDVQVLRDSWT-- 141 (410)
T ss_dssp SCCEEEEETTTT-------------EEEETTSCEEECSEEEECCCEEECCCCCTTTTSTTEECCCSHHHHHHHHHHCC--
T ss_pred CCEEEEEECCCC-------------EEEECCCCEEECCEEEEccCCcccCCCCCCccccceEEeccHHHHHHHHHHhc--
Confidence 8 9999988765 58888888999999999999999999999975 56677889999888876532
Q ss_pred HHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCC-CChhhHHHHHHHHHhCCCEEEcCceeeE
Q 009310 235 ERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT-GTPGNREAALKVLSARKVQLVLGYFVRC 313 (538)
Q Consensus 235 ~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~-~~~~~~~~~~~~l~~~gV~v~~~~~V~~ 313 (538)
.+++|+|||+|++|+|+|..+.+.+.+ |+++++.+.+++. +++.+.+.+.+.+++.||++++++.|++
T Consensus 142 --------~~~~vvViGgG~~g~E~A~~l~~~g~~---Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~ 210 (410)
T 3ef6_A 142 --------SATRLLIVGGGLIGCEVATTARKLGLS---VTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGVVG 210 (410)
T ss_dssp --------TTCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEECSCCEEE
T ss_pred --------cCCeEEEECCCHHHHHHHHHHHhCCCe---EEEEecCCccchhhcCHHHHHHHHHHHHHCCCEEEeCCEEEE
Confidence 268999999999999999999887665 9999999988764 6888999999999999999999999999
Q ss_pred EeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcCCC
Q 009310 314 IRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNAR 393 (538)
Q Consensus 314 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~ 393 (538)
++.++.. ..+++. +|+++++|.||+|+|.+|+++++... +++.+ +
T Consensus 211 i~~~~~~---------------------~~v~~~--------dg~~i~aD~Vv~a~G~~p~~~l~~~~-----gl~~~-~ 255 (410)
T 3ef6_A 211 FSGEGQL---------------------EQVMAS--------DGRSFVADSALICVGAEPADQLARQA-----GLACD-R 255 (410)
T ss_dssp EECSSSC---------------------CEEEET--------TSCEEECSEEEECSCEEECCHHHHHT-----TCCBS-S
T ss_pred EeccCcE---------------------EEEEEC--------CCCEEEcCEEEEeeCCeecHHHHHhC-----CCccC-C
Confidence 9875411 234443 77899999999999999998876543 46666 4
Q ss_pred CCeeeCCCcccCCCCCEEEccccccccCCCCC-CCCccHHHHHHHHHHHHHHHHHHHCCCCCCCceecCc-c-cEEEecC
Q 009310 394 GQAETDETLCVKGHPRIFALGDSSALRDSSGR-PLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNL-G-EMMILGR 470 (538)
Q Consensus 394 G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~-~~~~~~~~A~~qg~~aa~~i~~~l~~~~~~p~~~~~~-g-~~~~lG~ 470 (538)
| |.||+++|+ +.|+|||+|||+..+++.|. ..++++..|..||+.+|.||.+.....+..||.|+++ + .+..+|.
T Consensus 256 g-i~vd~~~~t-~~~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~p~~~~~~~~~~~~~~G~ 333 (410)
T 3ef6_A 256 G-VIVDHCGAT-LAKGVFAVGDVASWPLRAGGRRSLETYMNAQRQAAAVAAAILGKNVSAPQLPVSWTEIAGHRMQMAGD 333 (410)
T ss_dssp S-EECCTTSBC-SSTTEEECGGGEEEEBTTSSEECCCCHHHHHHHHHHHHHHHTTCCCCCCBCCEEEEEETTEEEEEESC
T ss_pred e-EEEccCeeE-CCCCEEEEEcceeccCCCCCeeeechHHHHHHHHHHHHHHHcCCCCCCCCCCeeEEEECCceEEEEcC
Confidence 4 999999999 99999999999987654332 2356789999999999999987554555567877764 3 3445664
Q ss_pred C
Q 009310 471 N 471 (538)
Q Consensus 471 ~ 471 (538)
.
T Consensus 334 ~ 334 (410)
T 3ef6_A 334 I 334 (410)
T ss_dssp S
T ss_pred C
Confidence 3
No 9
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=1.4e-40 Score=347.22 Aligned_cols=328 Identities=24% Similarity=0.314 Sum_probs=265.2
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC--cchhhhhcCCCCCccccccHHHHhccCCcEEE
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK--PMLYELLSGEVDAWEIAPRFADLLANTGVQFF 155 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~--p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 155 (538)
++++|||||||+||++||..|++.++ ..+|+|||++++++|. ++...++.+......+.....+++...+++++
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~----~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 83 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGF----EGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMK 83 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTC----CSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEEE
T ss_pred CCCcEEEECChHHHHHHHHHHHccCc----CCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEEE
Confidence 45799999999999999999999432 2349999999987764 34446677776777777777788888999999
Q ss_pred Ee-eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCCCCCCcc-ccCcCCCChHHHHHHHHHHHH
Q 009310 156 KD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAA-EFAFPFSTLEDACRVDRKLSE 233 (538)
Q Consensus 156 ~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p~ipG~~-~~~~~~~~~~d~~~~~~~l~~ 233 (538)
.+ +++.+++..+ .+.++++..+.||+||+|||+.|+.|++||.+ ++++.+.+.+++..++..+..
T Consensus 84 ~~~~v~~id~~~~-------------~v~~~~g~~~~~d~lvlAtG~~~~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~ 150 (415)
T 3lxd_A 84 LGAEVVSLDPAAH-------------TVKLGDGSAIEYGKLIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMAELDA 150 (415)
T ss_dssp ETCCEEEEETTTT-------------EEEETTSCEEEEEEEEECCCEECCCCBTTSSCCBTEECCCSHHHHHHHHHHHHT
T ss_pred eCCEEEEEECCCC-------------EEEECCCCEEEeeEEEEccCCccCCCCCCCccccCEEEEcCHHHHHHHHHHhhh
Confidence 97 9999988765 58888888999999999999999999999975 556778899998887765431
Q ss_pred HHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCC-CChhhHHHHHHHHHhCCCEEEcCceee
Q 009310 234 LERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT-GTPGNREAALKVLSARKVQLVLGYFVR 312 (538)
Q Consensus 234 ~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~-~~~~~~~~~~~~l~~~gV~v~~~~~V~ 312 (538)
.+++|+|||+|.+|+|+|..+.+.+.+ |+++++.+.+++. +++.+.+.+.+.++++||++++++.|+
T Consensus 151 ---------~~~~vvViGgG~~g~e~A~~l~~~g~~---Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~ 218 (415)
T 3lxd_A 151 ---------GAKNAVVIGGGYIGLEAAAVLTKFGVN---VTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRTGAAMD 218 (415)
T ss_dssp ---------TCCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEETCCEE
T ss_pred ---------cCCeEEEECCCHHHHHHHHHHHhcCCe---EEEEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEECCEEE
Confidence 147999999999999999999987765 9999999998885 688999999999999999999999999
Q ss_pred EEeccccccccccCCCCCcccccccccCCCce-EEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcC
Q 009310 313 CIRRVGEFEASVKQPESGAIPNIAADKNSDKY-ILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLN 391 (538)
Q Consensus 313 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~ 391 (538)
++..++ +.+ .+.+. +|+++++|.||+|+|.+|+++++... +++.+
T Consensus 219 ~i~~~~-----------------------~~v~~v~l~------dG~~i~aD~Vv~a~G~~p~~~l~~~~-----gl~~~ 264 (415)
T 3lxd_A 219 CIEGDG-----------------------TKVTGVRMQ------DGSVIPADIVIVGIGIVPCVGALISA-----GASGG 264 (415)
T ss_dssp EEEESS-----------------------SBEEEEEES------SSCEEECSEEEECSCCEESCHHHHHT-----TCCCS
T ss_pred EEEecC-----------------------CcEEEEEeC------CCCEEEcCEEEECCCCccChHHHHhC-----CCCcC
Confidence 998754 222 23322 77899999999999999998876543 45555
Q ss_pred CCCCeeeCCCcccCCCCCEEEccccccccCC-C-CC-CCCccHHHHHHHHHHHHHHHHHHHCCCCCCCceecCc-c-cEE
Q 009310 392 ARGQAETDETLCVKGHPRIFALGDSSALRDS-S-GR-PLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNL-G-EMM 466 (538)
Q Consensus 392 ~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~-~-~~-~~~~~~~~A~~qg~~aa~~i~~~l~~~~~~p~~~~~~-g-~~~ 466 (538)
+| |.||+++|+ +.|+|||+|||+..+++ . |. ....++..|..||+.+|+||.+.....+..||+|+++ + .+.
T Consensus 265 -~g-i~vd~~~~t-~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~p~~~~~~~~~~~~ 341 (415)
T 3lxd_A 265 -NG-VDVDEFCRT-SLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICGAPVPYKATPWFWSNQYDLKLQ 341 (415)
T ss_dssp -SS-EECCTTCBC-SSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHTTCCCCCCCCCEEEEEETTEEEE
T ss_pred -CC-EEECCCCCc-CCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhcCCCCCCCCCCeeEeeeCCcEEE
Confidence 44 999999999 89999999999987653 1 32 3355789999999999999987554555678888765 3 345
Q ss_pred EecCC
Q 009310 467 ILGRN 471 (538)
Q Consensus 467 ~lG~~ 471 (538)
.+|..
T Consensus 342 ~~G~~ 346 (415)
T 3lxd_A 342 TVGLS 346 (415)
T ss_dssp EEECC
T ss_pred EEeCC
Confidence 57754
No 10
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=8.4e-41 Score=342.65 Aligned_cols=286 Identities=21% Similarity=0.306 Sum_probs=241.9
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCccc-CcchhhhhcCCCCCccccccHHHHhccCCcEEEEe-
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF-KPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~-~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (538)
.+|||||||+||++||..|++ .| +|+|||++++..| +++++..+.+..+.+++.....+++++.+++++.+
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~------~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g~ 81 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQ------TY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAE 81 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTT------TS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEECSC
T ss_pred CcEEEECCcHHHHHHHHHHhh------cC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEECC
Confidence 599999999999999999988 56 9999999987554 57777777777777777777777787889999987
Q ss_pred eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCCCCCCccccCcCCCChHHHHHHHHHHHHHHHh
Q 009310 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERR 237 (538)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~ 237 (538)
+|+.+++..+ +|. .++.++.||+||||||++|+.|++|| .++++.+.+.+++..+++.+..
T Consensus 82 ~v~~id~~~~-------------~V~-~~g~~~~~d~lViATGs~p~~p~i~G-~~~v~~~~~~~~~~~l~~~~~~---- 142 (367)
T 1xhc_A 82 EAKLIDRGRK-------------VVI-TEKGEVPYDTLVLATGARAREPQIKG-KEYLLTLRTIFDADRIKESIEN---- 142 (367)
T ss_dssp CEEEEETTTT-------------EEE-ESSCEEECSEEEECCCEEECCCCSBT-GGGEECCCSHHHHHHHHHHHHH----
T ss_pred EEEEEECCCC-------------EEE-ECCcEEECCEEEECCCCCCCCCCCCC-cCCEEEEcCHHHHHHHHHHhhc----
Confidence 6999987754 466 56778999999999999999999999 4667778889998888776532
Q ss_pred ccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEEcCceeeEEecc
Q 009310 238 NFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRV 317 (538)
Q Consensus 238 ~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~ 317 (538)
+++++|||+|++|+|+|..+++.+.+ |+++++.+.+++ +++++.+.+.+.|++.||++++++.|++++.
T Consensus 143 ------~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~- 211 (367)
T 1xhc_A 143 ------SGEAIIIGGGFIGLELAGNLAEAGYH---VKLIHRGAMFLG-LDEELSNMIKDMLEETGVKFFLNSELLEANE- 211 (367)
T ss_dssp ------HSEEEEEECSHHHHHHHHHHHHTTCE---EEEECSSSCCTT-CCHHHHHHHHHHHHHTTEEEECSCCEEEECS-
T ss_pred ------CCcEEEECCCHHHHHHHHHHHhCCCE---EEEEeCCCeecc-CCHHHHHHHHHHHHHCCCEEEcCCEEEEEEe-
Confidence 46999999999999999999988765 999999999998 8999999999999999999999999999974
Q ss_pred ccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCee
Q 009310 318 GEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAE 397 (538)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~ 397 (538)
+.++++ +|+ +++|.||+|+|.+|++++++.. +++.+ +| |.
T Consensus 212 ------------------------~~v~~~--------~g~-i~~D~vi~a~G~~p~~~ll~~~-----gl~~~-~g-i~ 251 (367)
T 1xhc_A 212 ------------------------EGVLTN--------SGF-IEGKVKICAIGIVPNVDLARRS-----GIHTG-RG-IL 251 (367)
T ss_dssp ------------------------SEEEET--------TEE-EECSCEEEECCEEECCHHHHHT-----TCCBS-SS-EE
T ss_pred ------------------------eEEEEC--------CCE-EEcCEEEECcCCCcCHHHHHhC-----CCCCC-CC-EE
Confidence 455553 566 9999999999999998766533 46665 44 99
Q ss_pred eCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHH
Q 009310 398 TDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWA 447 (538)
Q Consensus 398 vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~ 447 (538)
||+++|+ +.|+|||+|||+.... ..++++..|.+||+.+|.||.+
T Consensus 252 Vd~~~~t-~~~~IyA~GD~a~~~~----~~~~~~~~A~~qg~~aa~~i~g 296 (367)
T 1xhc_A 252 IDDNFRT-SAKDVYAIGDCAEYSG----IIAGTAKAAMEQARVLADILKG 296 (367)
T ss_dssp CCTTSBC-SSTTEEECGGGEEBTT----BCCCSHHHHHHHHHHHHHHHTT
T ss_pred ECCCccc-CCCCEEEeEeeeecCC----CCccHHHHHHHHHHHHHHHhcC
Confidence 9999998 8999999999997521 2256899999999999999975
No 11
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=8.3e-41 Score=347.60 Aligned_cols=326 Identities=22% Similarity=0.329 Sum_probs=263.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC--cchhhhhcCCCCCccccccHHHHhccCCcEEEE
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK--PMLYELLSGEVDAWEIAPRFADLLANTGVQFFK 156 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~--p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 156 (538)
+++|||||||+||++||..|++.+ ...+|+|||++++++|. ++...++.+......+.....+++...+++++.
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g----~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~ 76 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAK----YPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELIS 76 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT----CCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEEC
T ss_pred CCCEEEEcChHHHHHHHHHHHhhC----cCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEE
Confidence 368999999999999999999943 12389999999987764 344466777777777777777888888999998
Q ss_pred eeEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCCCCCCcc-ccCcCCCChHHHHHHHHHHHHHH
Q 009310 157 DRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAA-EFAFPFSTLEDACRVDRKLSELE 235 (538)
Q Consensus 157 ~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p~ipG~~-~~~~~~~~~~d~~~~~~~l~~~~ 235 (538)
.+++.+++..+ .+.++++..+.||+||+|||+.|+.|++||.+ .+++.+.+.+++..++..+..
T Consensus 77 ~~v~~id~~~~-------------~v~~~~g~~~~~d~lvlAtG~~p~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~-- 141 (404)
T 3fg2_P 77 DRMVSIDREGR-------------KLLLASGTAIEYGHLVLATGARNRMLDVPNASLPDVLYLRTLDESEVLRQRMPD-- 141 (404)
T ss_dssp CCEEEEETTTT-------------EEEESSSCEEECSEEEECCCEEECCCCSTTTTSTTEECCSSHHHHHHHHHHGGG--
T ss_pred EEEEEEECCCC-------------EEEECCCCEEECCEEEEeeCCCccCCCCCCCCCCcEEEECCHHHHHHHHHHhhc--
Confidence 99999988765 58888888999999999999999999999974 456778888888887765432
Q ss_pred HhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCC-CChhhHHHHHHHHHhCCCEEEcCceeeEE
Q 009310 236 RRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT-GTPGNREAALKVLSARKVQLVLGYFVRCI 314 (538)
Q Consensus 236 ~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~-~~~~~~~~~~~~l~~~gV~v~~~~~V~~i 314 (538)
+++|+|||+|.+|+|+|..+.+.+.+ |+++++.+.+++. +++.+.+.+.+.+++.||++++++.|+++
T Consensus 142 --------~~~vvViGgG~~g~e~A~~l~~~g~~---Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i 210 (404)
T 3fg2_P 142 --------KKHVVVIGAGFIGLEFAATARAKGLE---VDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEI 210 (404)
T ss_dssp --------CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEE
T ss_pred --------CCeEEEECCCHHHHHHHHHHHhCCCE---EEEEeCCCcchhhccCHHHHHHHHHHHHhCCcEEEECCEEEEE
Confidence 68999999999999999999887765 9999999998875 68899999999999999999999999999
Q ss_pred eccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcCCCC
Q 009310 315 RRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARG 394 (538)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G 394 (538)
..+++.. .+|++. +|+++++|.||+|+|.+|++++++.. ++..+ +|
T Consensus 211 ~~~~~~v--------------------~~V~~~--------dG~~i~aD~Vv~a~G~~p~~~l~~~~-----gl~~~-~G 256 (404)
T 3fg2_P 211 AAEGDRV--------------------TGVVLS--------DGNTLPCDLVVVGVGVIPNVEIAAAA-----GLPTA-AG 256 (404)
T ss_dssp EEETTEE--------------------EEEEET--------TSCEEECSEEEECCCEEECCHHHHHT-----TCCBS-SS
T ss_pred EecCCcE--------------------EEEEeC--------CCCEEEcCEEEECcCCccCHHHHHhC-----CCCCC-CC
Confidence 8753110 123332 77899999999999999998777543 45665 45
Q ss_pred CeeeCCCcccCCCCCEEEccccccccCC-CCC-CCCccHHHHHHHHHHHHHHHHHHHCCCCCCCceecCc-c-cEEEecC
Q 009310 395 QAETDETLCVKGHPRIFALGDSSALRDS-SGR-PLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNL-G-EMMILGR 470 (538)
Q Consensus 395 ~i~vd~~l~~~~~~~VfaiGD~~~~~~~-~~~-~~~~~~~~A~~qg~~aa~~i~~~l~~~~~~p~~~~~~-g-~~~~lG~ 470 (538)
|.||+++|+ +.|+|||+|||+..+++ .|. ....++..|..||+.+|.||.+.....+..||+|+++ + .+..+|.
T Consensus 257 -i~vd~~~~t-~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~p~~~~~~~~~~~~~~G~ 334 (404)
T 3fg2_P 257 -IIVDQQLLT-SDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLTGDAKPYDGYPWFWSDQGDDKLQIVGL 334 (404)
T ss_dssp -EEECTTSBC-SSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTTTCCCCCCCCCEEEEEETTEEEEEEEC
T ss_pred -EEECCCccc-CCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHHhCCCCCCCCCCCceEeEECCcEEEEEeC
Confidence 999999998 89999999999987653 232 2245689999999999999987544455678888765 3 3445664
No 12
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=100.00 E-value=3.6e-40 Score=343.44 Aligned_cols=310 Identities=20% Similarity=0.321 Sum_probs=259.5
Q ss_pred CeEEEECCcHHHHHHHHHhhh-cccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEee
Q 009310 80 PRICILGGGFGGLYTALRLES-LVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKDR 158 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~-~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~ 158 (538)
++|||||||+||+++|..|++ .. .|++|+|||+++++.+.|.+.....+....+++...+.+.+++.+++++.++
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~----~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~ 77 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVG----SKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEGT 77 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHG----GGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEECE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCC----CCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEee
Confidence 689999999999999999988 32 5789999999999999998888777888888899999999988999999999
Q ss_pred EEEEcCCCCcCcCCCceeecccEEEcCCce----EEEeeEEEEeCCCCCCCCCCCCccccCcCCCChHHHHHHHHHHHHH
Q 009310 159 VKLLCPSDHLGVNGPMACTHGGTVLLESGL----IVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSEL 234 (538)
Q Consensus 159 v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~----~~~yD~lVlAtG~~~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~ 234 (538)
|+.++.+.+ .+.++++. .+.||+||+|||+.|+.|.+||+.++...+++.+++..+++.+..+
T Consensus 78 v~~i~~~~~-------------~V~~~~g~~~~~~~~~d~lViAtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~l~~~ 144 (409)
T 3h8l_A 78 VEKIDAKSS-------------MVYYTKPDGSMAEEEYDYVIVGIGAHLATELVKGWDKYGYSVCEPEFATKLREKLESF 144 (409)
T ss_dssp EEEEETTTT-------------EEEEECTTSCEEEEECSEEEECCCCEECGGGSBTHHHHCEESSSTTHHHHHHHHHHHC
T ss_pred EEEEeCCCC-------------EEEEccCCcccceeeCCEEEECCCCCcCccCCCChhhcCcCcCCHHHHHHHHHHHHHh
Confidence 999987765 35555443 4999999999999999999999877777778888988888876542
Q ss_pred HHhccCCCCCCeEEEECCCh-------------------------hHHHHHHHHHHHHHhcC-----cEEEEecCCccCC
Q 009310 235 ERRNFGKDSLIRVAVVGCGY-------------------------SGVELAATVSERLEEKG-----IVQAINVETTICP 284 (538)
Q Consensus 235 ~~~~~~~~~~~~VvVVGgG~-------------------------~g~E~A~~l~~~~~~~~-----~Vtlv~~~~~~l~ 284 (538)
.++++|||+|. .++|+|..+++...+.+ .|+++++.+ +++
T Consensus 145 ---------~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~~~v~~~~~~~-~l~ 214 (409)
T 3h8l_A 145 ---------QGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPGE-YLS 214 (409)
T ss_dssp ---------CSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTTEEEEEECSSS-SST
T ss_pred ---------cCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCc-ccc
Confidence 24778999992 58999999888777655 599999988 788
Q ss_pred CCChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccE
Q 009310 285 TGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADL 364 (538)
Q Consensus 285 ~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~ 364 (538)
.+++.+.+.+.+.+++.||++++++.|++++. ++++++ +|+++++|+
T Consensus 215 ~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~-------------------------~~v~~~--------~g~~~~~D~ 261 (409)
T 3h8l_A 215 DLSPNSRKAVASIYNQLGIKLVHNFKIKEIRE-------------------------HEIVDE--------KGNTIPADI 261 (409)
T ss_dssp TBCHHHHHHHHHHHHHHTCEEECSCCEEEECS-------------------------SEEEET--------TSCEEECSE
T ss_pred ccCHHHHHHHHHHHHHCCCEEEcCCceEEECC-------------------------CeEEEC--------CCCEEeeeE
Confidence 88899999999999999999999999999987 455554 678999999
Q ss_pred EEEecCCCCCCCCCCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHH
Q 009310 365 VLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWN 444 (538)
Q Consensus 365 vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~ 444 (538)
||+++|++|+ +++...+. ++ .+++|+|.||+++|++++||||++|||+.. +.++++..|..||+++|+|
T Consensus 262 vi~a~G~~~~-~~l~~~~~---~l-~~~~G~i~vd~~~~~~~~~~vfa~GD~~~~------~~~~~~~~A~~q~~~aa~~ 330 (409)
T 3h8l_A 262 TILLPPYTGN-PALKNSTP---DL-VDDGGFIPTDLNMVSIKYDNVYAVGDANSM------TVPKLGYLAVMTGRIAAQH 330 (409)
T ss_dssp EEEECCEECC-HHHHTSCG---GG-SCTTSCBCBBTTSBBSSCTTEEECGGGBTT------CCSCCHHHHHHHHHHHHHH
T ss_pred EEECCCCCcc-HHHHhccc---cC-cCCCCCEEeCcccccCCCCCEEEeehhccC------CCCcHHHHHHHHHHHHHHH
Confidence 9999999998 55554310 22 467899999999999899999999999986 3478999999999999999
Q ss_pred HHHHH-CCCCCCCceec
Q 009310 445 LWAAI-NDRPLLPFRFQ 460 (538)
Q Consensus 445 i~~~l-~~~~~~p~~~~ 460 (538)
|.+.+ .+.+..+|...
T Consensus 331 i~~~l~~~~~~~~~~~~ 347 (409)
T 3h8l_A 331 LANRLGVPTKVDKYYPT 347 (409)
T ss_dssp HHHHTTCCCCCCCCCCC
T ss_pred HHHHhcCCCCccccCCE
Confidence 99999 44454666543
No 13
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=5.6e-40 Score=341.57 Aligned_cols=318 Identities=23% Similarity=0.262 Sum_probs=248.4
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC-cch-hhhhcCCCCCccccccHHHHhccCCcEEE
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-PML-YELLSGEVDAWEIAPRFADLLANTGVQFF 155 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~-p~~-~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 155 (538)
++++|||||||+||+++|..|++.+ ...+|+|||++++++|. +.+ ..++.+.. .+.+... ++.+.+++++
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g----~~~~V~lie~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~v~~~ 77 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAG----YQGLITVVGDEAERPYDRPPLSKDFMAHGD-AEKIRLD---CKRAPEVEWL 77 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHT----CCSCEEEEESSCSCCBCSGGGGTHHHHHCC-GGGSBCC---CTTSCSCEEE
T ss_pred CCCcEEEECChHHHHHHHHHHHccC----CCCeEEEEECCCCCcccCCCCCHHHhCCCc-hhhhhHH---HHHHCCCEEE
Confidence 4579999999999999999999954 23369999999887654 333 33444433 2322222 4567789999
Q ss_pred Ee-eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCCCC-CCccccCcCCCChHHHHHHHHHHHH
Q 009310 156 KD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVV-PGAAEFAFPFSTLEDACRVDRKLSE 233 (538)
Q Consensus 156 ~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p~i-pG~~~~~~~~~~~~d~~~~~~~l~~ 233 (538)
.+ +|+.++.+.+ ++.++++..+.||+||+|||+.|+.|++ ||.+++++.+.+.+++..+++.+.
T Consensus 78 ~~~~v~~i~~~~~-------------~v~~~~g~~~~~d~lviAtG~~~~~~~i~~G~~~~v~~~~~~~~~~~l~~~~~- 143 (408)
T 2gqw_A 78 LGVTAQSFDPQAH-------------TVALSDGRTLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGLR- 143 (408)
T ss_dssp ETCCEEEEETTTT-------------EEEETTSCEEECSEEEECCCEEECCCGGGTTCSSCEEECCSHHHHHHHHTTCC-
T ss_pred cCCEEEEEECCCC-------------EEEECCCCEEECCEEEECCCCCCCCCCccCCCCCcEEEECCHHHHHHHHHHhh-
Confidence 97 5999987654 5777788899999999999999999999 997655666788888877765431
Q ss_pred HHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCC-CChhhHHHHHHHHHhCCCEEEcCceee
Q 009310 234 LERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT-GTPGNREAALKVLSARKVQLVLGYFVR 312 (538)
Q Consensus 234 ~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~-~~~~~~~~~~~~l~~~gV~v~~~~~V~ 312 (538)
.+++|+|||+|.+|+|+|..|.+.+.+ |+++++.+.+++. +++++.+.+.+.+++.||++++++.|+
T Consensus 144 ---------~~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~ 211 (408)
T 2gqw_A 144 ---------PQSRLLIVGGGVIGLELAATARTAGVH---VSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVT 211 (408)
T ss_dssp ---------TTCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEESCCEE
T ss_pred ---------cCCeEEEECCCHHHHHHHHHHHhCCCE---EEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEeCCEEE
Confidence 168999999999999999999887765 9999999999884 889999999999999999999999999
Q ss_pred EEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcCC
Q 009310 313 CIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNA 392 (538)
Q Consensus 313 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~ 392 (538)
++++ +.+++. +|+++++|.||+|+|.+|++++++.. +++++
T Consensus 212 ~i~~-------------------------~~v~~~--------~g~~i~~D~vi~a~G~~p~~~l~~~~-----gl~~~- 252 (408)
T 2gqw_A 212 GSVD-------------------------GVVLLD--------DGTRIAADMVVVGIGVLANDALARAA-----GLACD- 252 (408)
T ss_dssp EEET-------------------------TEEEET--------TSCEEECSEEEECSCEEECCHHHHHH-----TCCBS-
T ss_pred EEEC-------------------------CEEEEC--------CCCEEEcCEEEECcCCCccHHHHHhC-----CCCCC-
Confidence 9982 434443 67889999999999999998876533 46665
Q ss_pred CCCeeeCCCcccCCCCCEEEccccccccCC-CCCC-CCccHHHHHHHHHHHHHHHHHHHC-CCCCCCceecCc--ccEEE
Q 009310 393 RGQAETDETLCVKGHPRIFALGDSSALRDS-SGRP-LPATAQVAFQQADFAGWNLWAAIN-DRPLLPFRFQNL--GEMMI 467 (538)
Q Consensus 393 ~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~-~~~~-~~~~~~~A~~qg~~aa~~i~~~l~-~~~~~p~~~~~~--g~~~~ 467 (538)
+| |.||+++|+ +.|+|||+|||+..+.+ .|++ .+.++..|.+||+.+|.||.+... ..+..|+.|.++ ..+.+
T Consensus 253 ~g-i~Vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~p~~~~~~~~~~~~~ 330 (408)
T 2gqw_A 253 DG-IFVDAYGRT-TCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPTAPGYAELPWYWSDQGALRIQV 330 (408)
T ss_dssp SS-EECCTTCBC-SSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHCTTSCCCCCCCEEEEEETTEEEEE
T ss_pred CC-EEECCCCcc-CCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcCCCCCcCCCCCeEEEEECCceEEE
Confidence 45 999999998 99999999999987543 1222 134789999999999999987554 445567776553 24555
Q ss_pred ecC
Q 009310 468 LGR 470 (538)
Q Consensus 468 lG~ 470 (538)
+|.
T Consensus 331 ~G~ 333 (408)
T 2gqw_A 331 AGL 333 (408)
T ss_dssp EEC
T ss_pred ECC
Confidence 664
No 14
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=4.5e-39 Score=350.51 Aligned_cols=328 Identities=20% Similarity=0.310 Sum_probs=250.0
Q ss_pred HHHHhhhcccccccccccccccCcCCCCCCCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcc-
Q 009310 47 FAASNSSGRNGDLVVTSEDESASQTYTWPDKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM- 125 (538)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~- 125 (538)
..+.++||..|++.... ...+.+++++|||||||+|||+||..|++.+ ++++|+|||+++.+.|.+.
T Consensus 12 ~~~~~~np~~g~e~~~~--------~~~~~~~~~~VvIIGgG~AGl~aA~~L~~~~----~g~~V~vie~~~~~~~~~~~ 79 (588)
T 3ics_A 12 MASMTGGQQMGRTLYDD--------DDKDRWGSRKIVVVGGVAGGASVAARLRRLS----EEDEIIMVERGEYISFANCG 79 (588)
T ss_dssp ------------------------------CCCCEEEEECCSHHHHHHHHHHHHHC----SSSEEEEECSSSCSSBCGGG
T ss_pred ccccccchhcCccccCc--------ccCCcccCCCEEEECCcHHHHHHHHHHHhhC----cCCCEEEEECCCCccccCCC
Confidence 34567899999997642 1133345689999999999999999999852 5899999999999887764
Q ss_pred hhhhhcCCCCCc--cccccHHHHhccCCcEEEE-eeEEEEcCCCCcCcCCCceeecccEEEc---CCce--EEEeeEEEE
Q 009310 126 LYELLSGEVDAW--EIAPRFADLLANTGVQFFK-DRVKLLCPSDHLGVNGPMACTHGGTVLL---ESGL--IVEYDWLVL 197 (538)
Q Consensus 126 ~~~~~~g~~~~~--~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~~~~~~~~~~~~v~~---~~g~--~~~yD~lVl 197 (538)
++..+.+..... .+...+..+.++.++++.. .+|+.++.+.+. +.+ .++. .+.||+||+
T Consensus 80 lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~~~~~V~~id~~~~~-------------v~v~~~~~g~~~~~~~d~lvi 146 (588)
T 3ics_A 80 LPYYIGGVITERQKLLVQTVERMSKRFNLDIRVLSEVVKINKEEKT-------------ITIKNVTTNETYNEAYDVLIL 146 (588)
T ss_dssp HHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEECSEEEEEEETTTTE-------------EEEEETTTCCEEEEECSEEEE
T ss_pred CchhhcCcCCChHHhhccCHHHHHHhcCcEEEECCEEEEEECCCCE-------------EEEeecCCCCEEEEeCCEEEE
Confidence 666666654332 2445667777788999865 699999877652 333 3444 789999999
Q ss_pred eCCCCCCCCCCCCcc--ccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEE
Q 009310 198 SLGAEPKLDVVPGAA--EFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQA 275 (538)
Q Consensus 198 AtG~~~~~p~ipG~~--~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtl 275 (538)
|||+.|+.|++||.. +..+...+..+...+...+... . +++|+|||+|.+|+|+|..+.+.+.+ |++
T Consensus 147 AtG~~p~~p~i~G~~~~~~v~~~~~~~~~~~~~~~l~~~---~-----~~~vvViGgG~~g~e~A~~l~~~g~~---Vtl 215 (588)
T 3ics_A 147 SPGAKPIVPSIPGIEEAKALFTLRNVPDTDRIKAYIDEK---K-----PRHATVIGGGFIGVEMVENLRERGIE---VTL 215 (588)
T ss_dssp CCCEEECCCCCTTTTTCTTEEECSSHHHHHHHHHHHHHH---C-----CSEEEEECCSHHHHHHHHHHHHTTCE---EEE
T ss_pred CCCCCCCCCCCCCcccCCCeEEeCCHHHHHHHHHHHhhc---C-----CCeEEEECCCHHHHHHHHHHHhCCCe---EEE
Confidence 999999999999972 3456677788877776655321 1 68999999999999999999987766 999
Q ss_pred EecCCccCCCCChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCC
Q 009310 276 INVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGL 355 (538)
Q Consensus 276 v~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 355 (538)
+++.+.+++.+++.+.+.+.+.|++.||++++++.|++++.++ +.+++.
T Consensus 216 v~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-----------------------~~v~~~-------- 264 (588)
T 3ics_A 216 VEMANQVMPPIDYEMAAYVHEHMKNHDVELVFEDGVDALEENG-----------------------AVVRLK-------- 264 (588)
T ss_dssp ECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEGGG-----------------------TEEEET--------
T ss_pred EecCCcccccCCHHHHHHHHHHHHHcCCEEEECCeEEEEecCC-----------------------CEEEEC--------
Confidence 9999999999999999999999999999999999999998754 445553
Q ss_pred cceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCC-CCCC-CCccHHH
Q 009310 356 ESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDS-SGRP-LPATAQV 433 (538)
Q Consensus 356 ~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~-~~~~-~~~~~~~ 433 (538)
+++++++|.||+|+|++|++++++. .+++++++|+|.||+++|+ +.|+|||+|||+..++. .|.+ .++++..
T Consensus 265 ~g~~i~~D~Vi~a~G~~p~~~~l~~-----~g~~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~ 338 (588)
T 3ics_A 265 SGSVIQTDMLILAIGVQPESSLAKG-----AGLALGVRGTIKVNEKFQT-SDPHIYAIGDAIEVKDFVTETETMIPLAWP 338 (588)
T ss_dssp TSCEEECSEEEECSCEEECCHHHHH-----TTCCBCGGGCBCCCTTSBC-SSTTEEECGGGBCEEBTTTCCEECCCCHHH
T ss_pred CCCEEEcCEEEEccCCCCChHHHHh-----cCceEcCCCCEEECCcccc-CCCCEEEeeeeeecccccCCcccccccHHH
Confidence 6778999999999999999877643 3678889999999999999 99999999999976554 2332 4678999
Q ss_pred HHHHHHHHHHHHHH
Q 009310 434 AFQQADFAGWNLWA 447 (538)
Q Consensus 434 A~~qg~~aa~~i~~ 447 (538)
|..||+.+|.||.+
T Consensus 339 A~~~g~~aa~~i~g 352 (588)
T 3ics_A 339 ANRQGRMLADIIHG 352 (588)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999999985
No 15
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=3.8e-39 Score=337.55 Aligned_cols=318 Identities=23% Similarity=0.284 Sum_probs=247.8
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC-c-chhhhhcCCCCCccccccHHHHhccCCcEEE
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-P-MLYELLSGEVDAWEIAPRFADLLANTGVQFF 155 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~-p-~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 155 (538)
+.++|||||||+||+++|..|++.+ ...+|+|||++++++|. + +...++.+....+.+...+.+++++.+++++
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g----~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 78 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASG----WEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLL 78 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTT----CCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEE
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccC----cCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEE
Confidence 3589999999999999999999943 12389999999876653 2 3334455555555555555666777899998
Q ss_pred Ee-eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCCCCCCcc-cc---CcCCCChHHHHHHHHH
Q 009310 156 KD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAA-EF---AFPFSTLEDACRVDRK 230 (538)
Q Consensus 156 ~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p~ipG~~-~~---~~~~~~~~d~~~~~~~ 230 (538)
.+ .|+.++...+ .+.++++..+.||+||+|||+.|+.|++||.+ .+ ++.+.+.+++..+++.
T Consensus 79 ~~~~v~~i~~~~~-------------~v~~~~g~~~~~d~lviAtG~~p~~~~i~G~~~~~~~~v~~~~~~~d~~~l~~~ 145 (431)
T 1q1r_A 79 GGTQVTAINRDRQ-------------QVILSDGRALDYDRLVLATGGRPRPLPVASGAVGKANNFRYLRTLEDAECIRRQ 145 (431)
T ss_dssp CSCCEEEEETTTT-------------EEEETTSCEEECSEEEECCCEEECCCGGGTTHHHHSTTEEESSSHHHHHHHHHT
T ss_pred eCCEEEEEECCCC-------------EEEECCCCEEECCEEEEcCCCCccCCCCCCcccCCCceEEEECCHHHHHHHHHH
Confidence 86 7899987654 57777888999999999999999999999974 23 5567788888777654
Q ss_pred HHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCC-CChhhHHHHHHHHHhCCCEEEcCc
Q 009310 231 LSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT-GTPGNREAALKVLSARKVQLVLGY 309 (538)
Q Consensus 231 l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~-~~~~~~~~~~~~l~~~gV~v~~~~ 309 (538)
+. .+++|+|||+|.+|+|+|..+.+.+.+ |+++++.+.+++. +++.+.+.+.+.+++.||++++++
T Consensus 146 l~----------~~~~vvViGgG~~g~E~A~~l~~~G~~---Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~ 212 (431)
T 1q1r_A 146 LI----------ADNRLVVIGGGYIGLEVAATAIKANMH---VTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRTGT 212 (431)
T ss_dssp CC----------TTCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSTTTTTSCHHHHHHHHHHHHHHTCEEECSC
T ss_pred hh----------cCCeEEEECCCHHHHHHHHHHHhCCCE---EEEEEeCCccccchhhHHHHHHHHHHHHhCCeEEEeCC
Confidence 31 168999999999999999999887765 9999999998885 788999999999999999999999
Q ss_pred eeeEEec--cccccccccCCCCCcccccccccCCCce-EEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccC
Q 009310 310 FVRCIRR--VGEFEASVKQPESGAIPNIAADKNSDKY-ILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLH 386 (538)
Q Consensus 310 ~V~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~ 386 (538)
.|++++. ++ +.+ .+.+. +|+++++|.||+|+|.+|++++++..
T Consensus 213 ~v~~i~~~~~~-----------------------~~v~~v~~~------~G~~i~~D~Vv~a~G~~p~~~l~~~~----- 258 (431)
T 1q1r_A 213 QVCGFEMSTDQ-----------------------QKVTAVLCE------DGTRLPADLVIAGIGLIPNCELASAA----- 258 (431)
T ss_dssp CEEEEEECTTT-----------------------CCEEEEEET------TSCEEECSEEEECCCEEECCHHHHHT-----
T ss_pred EEEEEEeccCC-----------------------CcEEEEEeC------CCCEEEcCEEEECCCCCcCcchhhcc-----
Confidence 9999986 32 222 23322 67889999999999999998876543
Q ss_pred CCCcCCCCCeeeCCCcccCCCCCEEEccccccccCCC-CCC-CCccHHHHHHHHHHHHHHHHHHHCCCCCCCceecCc
Q 009310 387 DLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSS-GRP-LPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNL 462 (538)
Q Consensus 387 ~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~-~~~-~~~~~~~A~~qg~~aa~~i~~~l~~~~~~p~~~~~~ 462 (538)
+++++ +| |.||+++|+ +.|+|||+|||+..+.+. |.+ ...++..|..||+.+|.||.+.....+..|+.|.++
T Consensus 259 gl~~~-~g-i~Vd~~~~t-s~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~p~~~~~~ 333 (431)
T 1q1r_A 259 GLQVD-NG-IVINEHMQT-SDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCGKVPRDEAAPWFWSDQ 333 (431)
T ss_dssp TCCBS-SS-EECCTTSBC-SSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHTTCCCCCCCCCEEEEEE
T ss_pred CCCCC-CC-EEECCCccc-CCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhcCCCCCCCCCCeEEEEE
Confidence 46665 45 999999999 899999999999875431 221 134688999999999999986544445567766553
No 16
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=3.7e-38 Score=334.75 Aligned_cols=329 Identities=19% Similarity=0.264 Sum_probs=240.8
Q ss_pred HHHHhhhcccccccccccccccCcCCCCCCCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcc-
Q 009310 47 FAASNSSGRNGDLVVTSEDESASQTYTWPDKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM- 125 (538)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~- 125 (538)
..+.++||..|++.... . ..+...++||||||||+||++||..|++.+ +|++|+|||+++...|.+.
T Consensus 12 ~~~~~~np~~g~~~~~~-~-------~~~~~~~~dvvIIG~G~aGl~aA~~l~~~~----~g~~V~lie~~~~~~~~~~~ 79 (480)
T 3cgb_A 12 MASMTGGQQMGRTLYDD-D-------DKDRWGSMNYVIIGGDAAGMSAAMQIVRND----ENANVVTLEKGEIYSYAQCG 79 (480)
T ss_dssp ---------------------------------CEEEEECCSHHHHHHHHHHHHHC----TTCEEEEECSSSCCSBCGGG
T ss_pred cccccchhhhcccccCC-C-------CcCccccceEEEECCCHHHHHHHHHHHhhC----cCCcEEEEECCCCCCCCCCC
Confidence 45678999999986331 0 011112469999999999999999999842 5889999999988766653
Q ss_pred hhhhhcCCC-CCccccccHHHHh-ccCCcEEEE-eeEEEEcCCCCcCcCCCceeecccEEEc---CCce--EEEeeEEEE
Q 009310 126 LYELLSGEV-DAWEIAPRFADLL-ANTGVQFFK-DRVKLLCPSDHLGVNGPMACTHGGTVLL---ESGL--IVEYDWLVL 197 (538)
Q Consensus 126 ~~~~~~g~~-~~~~~~~~~~~~~-~~~~v~~~~-~~v~~i~~~~~~~~~~~~~~~~~~~v~~---~~g~--~~~yD~lVl 197 (538)
++..+.+.. +...+.....+.+ +..+++++. ..|+.++.+.+ .+.+ ++|. .+.||+||+
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~-------------~v~v~~~~~g~~~~~~~d~lvi 146 (480)
T 3cgb_A 80 LPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHEVTKVDTEKK-------------IVYAEHTKTKDVFEFSYDRLLI 146 (480)
T ss_dssp HHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEESSEEEEEEETTTT-------------EEEEEETTTCCEEEEECSEEEE
T ss_pred cchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEeCCEEEEEECCCC-------------EEEEEEcCCCceEEEEcCEEEE
Confidence 554444443 2444444344444 456899887 58899987654 2333 2354 799999999
Q ss_pred eCCCCCCCCCCCCcc-ccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEE
Q 009310 198 SLGAEPKLDVVPGAA-EFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAI 276 (538)
Q Consensus 198 AtG~~~~~p~ipG~~-~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv 276 (538)
|||+.|+.|++||.+ ++++.+.+.+++..+++.+.. ..+++|+|||+|++|+|+|..+.+.+.+ |+++
T Consensus 147 AtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~--------~~~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv 215 (480)
T 3cgb_A 147 ATGVRPVMPEWEGRDLQGVHLLKTIPDAERILKTLET--------NKVEDVTIIGGGAIGLEMAETFVELGKK---VRMI 215 (480)
T ss_dssp CCCEEECCCCCBTTTSBTEECCSSHHHHHHHHHHHHS--------SCCCEEEEECCHHHHHHHHHHHHHTTCE---EEEE
T ss_pred CCCCcccCCCCCCccCCCEEEeCCHHHHHHHHHHhhh--------cCCCeEEEECCCHHHHHHHHHHHhcCCe---EEEE
Confidence 999999999999975 456677888888888775531 1168999999999999999999887665 9999
Q ss_pred ecCCccCCCCChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCc
Q 009310 277 NVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLE 356 (538)
Q Consensus 277 ~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 356 (538)
++.+.+++.+++++.+.+.+.+++.||++++++.|++++.++ +...+.+ +
T Consensus 216 ~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-----------------------~v~~v~~-------~ 265 (480)
T 3cgb_A 216 ERNDHIGTIYDGDMAEYIYKEADKHHIEILTNENVKAFKGNE-----------------------RVEAVET-------D 265 (480)
T ss_dssp CCGGGTTSSSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESS-----------------------BEEEEEE-------T
T ss_pred EeCCchhhcCCHHHHHHHHHHHHHcCcEEEcCCEEEEEEcCC-----------------------cEEEEEE-------C
Confidence 999999998899999999999999999999999999998642 1112221 3
Q ss_pred ceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCC-CCCC-CCccHHHH
Q 009310 357 SQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDS-SGRP-LPATAQVA 434 (538)
Q Consensus 357 g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~-~~~~-~~~~~~~A 434 (538)
+.++++|.||+|+|.+|+.+++... +++++++|+|.||+++|+ +.|+|||+|||+...+. .|++ .++++..|
T Consensus 266 ~~~i~~D~vi~a~G~~p~~~~l~~~-----g~~~~~~G~I~Vd~~~~t-s~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A 339 (480)
T 3cgb_A 266 KGTYKADLVLVSVGVKPNTDFLEGT-----NIRTNHKGAIEVNAYMQT-NVQDVYAAGDCATHYHVIKEIHDHIPIGTTA 339 (480)
T ss_dssp TEEEECSEEEECSCEEESCGGGTTS-----CCCBCTTSCBCCCTTSBC-SSTTEEECGGGBCEEBTTTCSEECCCCHHHH
T ss_pred CCEEEcCEEEECcCCCcChHHHHhC-----CcccCCCCCEEECCCccC-CCCCEEEeeeEEEecCCCCCcceecchHHHH
Confidence 4579999999999999998877643 577888999999999999 89999999999986543 2332 34689999
Q ss_pred HHHHHHHHHHHHH
Q 009310 435 FQQADFAGWNLWA 447 (538)
Q Consensus 435 ~~qg~~aa~~i~~ 447 (538)
..||+.+|.||.+
T Consensus 340 ~~qg~~aa~~i~g 352 (480)
T 3cgb_A 340 NKQGRLAGLNMLD 352 (480)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcC
Confidence 9999999999975
No 17
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=2.7e-38 Score=343.02 Aligned_cols=324 Identities=21% Similarity=0.309 Sum_probs=246.8
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcc-hhhhhcCCCCC-cc-ccccHHHHhccCCcEEEE
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM-LYELLSGEVDA-WE-IAPRFADLLANTGVQFFK 156 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~-~~~~~~g~~~~-~~-~~~~~~~~~~~~~v~~~~ 156 (538)
++|||||||+|||+||..|++.+ .+++|+|||+++++.|.+. ++..+.+.... .. +......+.++.+++++.
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~----~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 77 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLS----ETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRV 77 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC----SSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEET
T ss_pred CcEEEECCCHHHHHHHHHHHhhC----cCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEE
Confidence 69999999999999999999853 5899999999999887764 55556665432 22 334445555557899865
Q ss_pred -eeEEEEcCCCCcCcCCCceeecccEEEcC---Cc--eEEEeeEEEEeCCCCCCCCCCCCcc-ccCcCCCChHHHHHHHH
Q 009310 157 -DRVKLLCPSDHLGVNGPMACTHGGTVLLE---SG--LIVEYDWLVLSLGAEPKLDVVPGAA-EFAFPFSTLEDACRVDR 229 (538)
Q Consensus 157 -~~v~~i~~~~~~~~~~~~~~~~~~~v~~~---~g--~~~~yD~lVlAtG~~~~~p~ipG~~-~~~~~~~~~~d~~~~~~ 229 (538)
.+|+.++...+. +.+. ++ ..+.||+||||||+.|+.|++||.+ ...+.+.+..++..+.+
T Consensus 78 ~~~V~~id~~~~~-------------v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~ipG~~~~~v~~~~~~~~~~~l~~ 144 (565)
T 3ntd_A 78 KHEVVAIDRAAKL-------------VTVRRLLDGSEYQESYDTLLLSPGAAPIVPPIPGVDNPLTHSLRNIPDMDRILQ 144 (565)
T ss_dssp TEEEEEEETTTTE-------------EEEEETTTCCEEEEECSEEEECCCEEECCCCCTTCCSTTEECCSSHHHHHHHHH
T ss_pred CCEEEEEECCCCE-------------EEEEecCCCCeEEEECCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHH
Confidence 699999877652 3332 23 3789999999999999999999984 45667778888777665
Q ss_pred HHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEEcCc
Q 009310 230 KLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGY 309 (538)
Q Consensus 230 ~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~ 309 (538)
.+.. . .+++|+|||+|++|+|+|..+.+.+.+ |+++++.+.+++.+++.+.+.+.+.+++.||++++++
T Consensus 145 ~~~~---~-----~~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~ 213 (565)
T 3ntd_A 145 TIQM---N-----NVEHATVVGGGFIGLEMMESLHHLGIK---TTLLELADQVMTPVDREMAGFAHQAIRDQGVDLRLGT 213 (565)
T ss_dssp HHHH---T-----TCSEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEETC
T ss_pred HHhh---C-----CCCEEEEECCCHHHHHHHHHHHhcCCc---EEEEEcCCccchhcCHHHHHHHHHHHHHCCCEEEeCC
Confidence 5432 1 167999999999999999999887766 9999999999999999999999999999999999999
Q ss_pred eeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCC
Q 009310 310 FVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLP 389 (538)
Q Consensus 310 ~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~ 389 (538)
.|++++.+.... ......... .......+.+.+.+. +|+++++|.||+|+|++|+++++. ..+++
T Consensus 214 ~v~~i~~~~~~~---~~~~~~~~~-~~~~~~~~~~~v~~~------~g~~i~~D~vi~a~G~~p~~~l~~-----~~g~~ 278 (565)
T 3ntd_A 214 ALSEVSYQVQTH---VASDAAGED-TAHQHIKGHLSLTLS------NGELLETDLLIMAIGVRPETQLAR-----DAGLA 278 (565)
T ss_dssp CEEEEEEECCCC---CCCGGGTCC-CTTCCTTCEEEEEET------TSCEEEESEEEECSCEEECCHHHH-----HHTCC
T ss_pred eEEEEecccccc---ccccccccc-cccccCCCcEEEEEc------CCCEEEcCEEEECcCCccchHHHH-----hCCcc
Confidence 999998631000 000000000 000001144555432 677899999999999999987654 23688
Q ss_pred cCCCCCeeeCCCcccCCCCCEEEccccccccCC-CCCC-CCccHHHHHHHHHHHHHHHHH
Q 009310 390 LNARGQAETDETLCVKGHPRIFALGDSSALRDS-SGRP-LPATAQVAFQQADFAGWNLWA 447 (538)
Q Consensus 390 l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~-~~~~-~~~~~~~A~~qg~~aa~~i~~ 447 (538)
++++|+|.||+++|+ +.|+|||+|||+..++. .|.+ .+++++.|.+||+.+|.||.+
T Consensus 279 ~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 337 (565)
T 3ntd_A 279 IGELGGIKVNAMMQT-SDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFG 337 (565)
T ss_dssp BCTTSSBCCCTTCBC-SSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTT
T ss_pred cCCCCCEEECCCccc-CCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhcC
Confidence 899999999999999 99999999999976654 2432 467899999999999999985
No 18
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=7.9e-38 Score=333.05 Aligned_cols=305 Identities=21% Similarity=0.269 Sum_probs=239.8
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcc-hhhhhcCC-CCCccccccHHHHhccCCcEEE
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM-LYELLSGE-VDAWEIAPRFADLLANTGVQFF 155 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~-~~~~~~g~-~~~~~~~~~~~~~~~~~~v~~~ 155 (538)
+++||||||||+||+++|..|++.+. ++++|+|||+++.+.+.+. ++..+.+. ..++++.....+.+++.+++++
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~---~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 110 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYG---DANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEELESLGAKVY 110 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHG---GGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEEE
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCC---CCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHHHHhCCCEEE
Confidence 45899999999999999999998531 2479999999987666654 33344444 3345555555667777889986
Q ss_pred Ee-eEEEEcCCCCcCcCCCceeecccEEEcC-C--ceEEEeeEEEEeCCCCCCCCCCCCcc------------ccCcCCC
Q 009310 156 KD-RVKLLCPSDHLGVNGPMACTHGGTVLLE-S--GLIVEYDWLVLSLGAEPKLDVVPGAA------------EFAFPFS 219 (538)
Q Consensus 156 ~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~-~--g~~~~yD~lVlAtG~~~~~p~ipG~~------------~~~~~~~ 219 (538)
.+ +++.++.+.+ .+.+. + +..+.||+||+|||++|..|++||.. ++++.+.
T Consensus 111 ~~~~v~~i~~~~~-------------~v~v~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~~~~f~~~~~~v~~~~ 177 (490)
T 2bc0_A 111 MESPVQSIDYDAK-------------TVTALVDGKNHVETYDKLIFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVK 177 (490)
T ss_dssp TTCCEEEEETTTT-------------EEEEEETTEEEEEECSEEEECCCEEECCCSCBTCCBCTTCTTCCBSSTTEEECS
T ss_pred eCCEEEEEECCCC-------------EEEEEeCCcEEEEECCEEEECCCCCcCCCCCCCccccccccccccccCCEEEeC
Confidence 54 6899987654 24443 3 45799999999999999999999975 3455667
Q ss_pred ChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCC-CCChhhHHHHHHHH
Q 009310 220 TLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICP-TGTPGNREAALKVL 298 (538)
Q Consensus 220 ~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~-~~~~~~~~~~~~~l 298 (538)
++++...+.+.+. ...+++|+|||+|++|+|+|..|++.+.+ |+++++.+.+++ .+++++.+.+.+.|
T Consensus 178 ~~~~~~~~~~~~~--------~~~~~~vvVIGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~~l~~~~~~~~~~~l~~~l 246 (490)
T 2bc0_A 178 LYQNSADVIAKLE--------NKDIKRVAVVGAGYIGVELAEAFQRKGKE---VVLIDVVDTCLAGYYDRDLTDLMAKNM 246 (490)
T ss_dssp SHHHHHHHHHHTT--------STTCCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSTTTTTSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhh--------hcCCceEEEECCCHHHHHHHHHHHHCCCe---EEEEEcccchhhhHHHHHHHHHHHHHH
Confidence 7777777665431 01268999999999999999999887665 999999999998 68999999999999
Q ss_pred HhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCce-EEeecccccCCcceEEeccEEEEecCCCCCCCC
Q 009310 299 SARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKY-ILELQPAIKGLESQIFEADLVLWTVGSKPLLPH 377 (538)
Q Consensus 299 ~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~ 377 (538)
++.||++++++.|++++.++ .+ .+.+ +++++++|.||+|+|++|++++
T Consensus 247 ~~~GV~i~~~~~v~~i~~~~------------------------~v~~v~~-------~g~~i~~D~Vi~a~G~~p~~~l 295 (490)
T 2bc0_A 247 EEHGIQLAFGETVKEVAGNG------------------------KVEKIIT-------DKNEYDVDMVILAVGFRPNTTL 295 (490)
T ss_dssp HTTTCEEEETCCEEEEECSS------------------------SCCEEEE-------SSCEEECSEEEECCCEEECCGG
T ss_pred HhCCeEEEeCCEEEEEEcCC------------------------cEEEEEE-------CCcEEECCEEEECCCCCcChHH
Confidence 99999999999999998632 22 1221 4578999999999999999887
Q ss_pred CCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCC-CCC-CCCccHHHHHHHHHHHHHHHHH
Q 009310 378 VEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDS-SGR-PLPATAQVAFQQADFAGWNLWA 447 (538)
Q Consensus 378 l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~-~~~-~~~~~~~~A~~qg~~aa~~i~~ 447 (538)
++. . ++++++|+|.||+++|+ +.|+|||+|||+..++. .++ ..++++..|.+||+.+|.||.+
T Consensus 296 l~~-----~-l~~~~~G~I~Vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 360 (490)
T 2bc0_A 296 GNG-----K-IDLFRNGAFLVNKRQET-SIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACG 360 (490)
T ss_dssp GTT-----C-SCBCTTSCBCCCTTCBC-SSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHTT
T ss_pred HHh-----h-hccCCCCCEEECCCccc-CCCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhcC
Confidence 653 2 56778899999999999 99999999999986442 222 2357899999999999999974
No 19
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=4.3e-38 Score=331.88 Aligned_cols=301 Identities=19% Similarity=0.229 Sum_probs=229.8
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcc-hhhhhcCCC-CCccccccHHHHhccCCcEEEE-
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM-LYELLSGEV-DAWEIAPRFADLLANTGVQFFK- 156 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~-~~~~~~g~~-~~~~~~~~~~~~~~~~~v~~~~- 156 (538)
+||||||||+||++||..|++.. ++++|+|||+++.+.|.+. +..++.+.. ...++.....+.+.+.+++++.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~----~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 78 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKY----PQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLN 78 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC----SSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHhhC----cCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEEC
Confidence 69999999999999999999842 5889999999998877654 444444443 3445555456667778999875
Q ss_pred eeEEEEcCCCCcCcCCCceeecccEEEc---CCceEEEeeEEEEeCCCCCCCCCCCCcc-ccCcCCCChHHHHHHHHHHH
Q 009310 157 DRVKLLCPSDHLGVNGPMACTHGGTVLL---ESGLIVEYDWLVLSLGAEPKLDVVPGAA-EFAFPFSTLEDACRVDRKLS 232 (538)
Q Consensus 157 ~~v~~i~~~~~~~~~~~~~~~~~~~v~~---~~g~~~~yD~lVlAtG~~~~~p~ipG~~-~~~~~~~~~~d~~~~~~~l~ 232 (538)
.+|+.++...+. +.+ .++..+.||+||+|||+.|..|++||.. +..+...+..+...+.+...
T Consensus 79 ~~V~~id~~~~~-------------v~v~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~ 145 (452)
T 3oc4_A 79 REVVAMDVENQL-------------IAWTRKEEQQWYSYDKLILATGASQFSTQIRGSQTEKLLKYKFLSGALAAVPLLE 145 (452)
T ss_dssp CEEEEEETTTTE-------------EEEEETTEEEEEECSEEEECCCCCBCCCCCBTTTCTTEEEGGGCC----CCHHHH
T ss_pred CEEEEEECCCCE-------------EEEEecCceEEEEcCEEEECCCcccCCCCCCCCCCCCEEEeCCHHHHHHHHHHHh
Confidence 589999877652 322 3566899999999999999999999975 33444444444444433322
Q ss_pred HHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCC-CChhhHHHHHHHHHhCCCEEEcCcee
Q 009310 233 ELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT-GTPGNREAALKVLSARKVQLVLGYFV 311 (538)
Q Consensus 233 ~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~-~~~~~~~~~~~~l~~~gV~v~~~~~V 311 (538)
. +++++|||+|.+|+|+|..+.+.+.+ |+++++.+++++. +++.+.+.+.+.+++.||++++++.|
T Consensus 146 ~----------~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~GV~i~~~~~v 212 (452)
T 3oc4_A 146 N----------SQTVAVIGAGPIGMEAIDFLVKMKKT---VHVFESLENLLPKYFDKEMVAEVQKSLEKQAVIFHFEETV 212 (452)
T ss_dssp T----------CSEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSSSTTTCCHHHHHHHHHHHHTTTEEEEETCCE
T ss_pred c----------CCEEEEECCCHHHHHHHHHHHhCCCe---EEEEEccCccccccCCHHHHHHHHHHHHHcCCEEEeCCEE
Confidence 1 68999999999999999999887766 9999999999986 89999999999999999999999999
Q ss_pred eEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcC
Q 009310 312 RCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLN 391 (538)
Q Consensus 312 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~ 391 (538)
++++.++ +++.+.+. ++ ++++|.||+|+|++|+++++.. .++++
T Consensus 213 ~~i~~~~-----------------------~~v~v~~~------~g-~i~aD~Vv~A~G~~p~~~~l~~------~~~~~ 256 (452)
T 3oc4_A 213 LGIEETA-----------------------NGIVLETS------EQ-EISCDSGIFALNLHPQLAYLDK------KIQRN 256 (452)
T ss_dssp EEEEECS-----------------------SCEEEEES------SC-EEEESEEEECSCCBCCCSSCCT------TSCBC
T ss_pred EEEEccC-----------------------CeEEEEEC------CC-EEEeCEEEECcCCCCChHHHHh------hhccC
Confidence 9998543 44544432 44 8999999999999999987753 26788
Q ss_pred CCCCeeeCCCcccCCCCCEEEccccccccCC-CCC-CCCccHHHHHHHHHHHHHHHHH
Q 009310 392 ARGQAETDETLCVKGHPRIFALGDSSALRDS-SGR-PLPATAQVAFQQADFAGWNLWA 447 (538)
Q Consensus 392 ~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~-~~~-~~~~~~~~A~~qg~~aa~~i~~ 447 (538)
++|+|.||+++|+ +.|+|||+|||+..++. .++ ..++.+..|..||+.+|.||.+
T Consensus 257 ~~g~i~vd~~~~t-~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g 313 (452)
T 3oc4_A 257 LDQTIAVDAYLQT-SVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLEE 313 (452)
T ss_dssp TTSCBCCCTTCBC-SSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSSS
T ss_pred CCCCEEECcCccC-CCCCEEEEEeeEEeccccCCceeecchHHHHHHHHHHHHHHhcC
Confidence 8999999999999 89999999999986432 122 1246899999999999999975
No 20
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=2.3e-38 Score=335.88 Aligned_cols=306 Identities=23% Similarity=0.327 Sum_probs=225.8
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcc-hhhhhcCCCCC-ccc-------cccHHHHhcc
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM-LYELLSGEVDA-WEI-------APRFADLLAN 149 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~-~~~~~~g~~~~-~~~-------~~~~~~~~~~ 149 (538)
+++|||||||+|||+||..|++.. ++++|+|||+++.+.|.+. ++..+.+.... ..+ ......+.+.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~----~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLD----PEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRIN 78 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHC----TTSEEEEECCC-----------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhC----cCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhh
Confidence 479999999999999999999842 5899999999998877653 55555554432 222 2223333335
Q ss_pred CCcEEEE-eeEEEEcCCCCcCcCCCceeecccEEEcC---Cce--EEEeeEEEEeCCCCCCCCCCCCcc-ccCcCCCChH
Q 009310 150 TGVQFFK-DRVKLLCPSDHLGVNGPMACTHGGTVLLE---SGL--IVEYDWLVLSLGAEPKLDVVPGAA-EFAFPFSTLE 222 (538)
Q Consensus 150 ~~v~~~~-~~v~~i~~~~~~~~~~~~~~~~~~~v~~~---~g~--~~~yD~lVlAtG~~~~~p~ipG~~-~~~~~~~~~~ 222 (538)
.+++++. .+|+.++.+.+. +.+. ++. .+.||+||+|||+.|..|++||.+ +..+.+.+.+
T Consensus 79 ~gi~~~~~~~V~~id~~~~~-------------v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~ 145 (472)
T 3iwa_A 79 KDVEALVETRAHAIDRAAHT-------------VEIENLRTGERRTLKYDKLVLALGSKANRPPVEGMDLAGVTPVTNLD 145 (472)
T ss_dssp --CEEECSEEEEEEETTTTE-------------EEEEETTTCCEEEEECSEEEECCCEEECCCSCTTTTSBTEEECCSHH
T ss_pred cCcEEEECCEEEEEECCCCE-------------EEEeecCCCCEEEEECCEEEEeCCCCcCCCCCCCCCCCCEEEeCCHH
Confidence 7888865 689999877652 3333 244 789999999999999999999984 4556677888
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHH-HHhcCcEEEEecCCccCC-CCChhhHHHHHHHHHh
Q 009310 223 DACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSER-LEEKGIVQAINVETTICP-TGTPGNREAALKVLSA 300 (538)
Q Consensus 223 d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~-~~~~~~Vtlv~~~~~~l~-~~~~~~~~~~~~~l~~ 300 (538)
++..+++.+.. ..+++++|||+|.+|+|+|..+.+. +.+ |+++++.+.+++ .+++.+.+.+.+.+++
T Consensus 146 ~~~~l~~~l~~--------~~~~~vvViGgG~~g~e~A~~l~~~~g~~---Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~ 214 (472)
T 3iwa_A 146 EAEFVQHAISA--------GEVSKAVIVGGGFIGLEMAVSLADMWGID---TTVVELADQIMPGFTSKSLSQMLRHDLEK 214 (472)
T ss_dssp HHHHHHHHCCT--------TSCSEEEEECCSHHHHHHHHHHHHHHCCE---EEEECSSSSSSTTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhc--------CCCCEEEEECCCHHHHHHHHHHHHhcCCc---EEEEEccCcccccccCHHHHHHHHHHHHh
Confidence 88777654311 1267999999999999999999987 665 999999999999 8899999999999999
Q ss_pred CCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCC
Q 009310 301 RKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEP 380 (538)
Q Consensus 301 ~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~ 380 (538)
.||++++++.|++++.++ +.+++.+. +|+++++|.||+|+|++|+++++..
T Consensus 215 ~GV~i~~~~~v~~i~~~~-----------------------~~v~v~~~------~g~~i~aD~Vv~a~G~~p~~~l~~~ 265 (472)
T 3iwa_A 215 NDVVVHTGEKVVRLEGEN-----------------------GKVARVIT------DKRTLDADLVILAAGVSPNTQLARD 265 (472)
T ss_dssp TTCEEECSCCEEEEEESS-----------------------SBEEEEEE------SSCEEECSEEEECSCEEECCHHHHH
T ss_pred cCCEEEeCCEEEEEEccC-----------------------CeEEEEEe------CCCEEEcCEEEECCCCCcCHHHHHh
Confidence 999999999999998744 44444433 6778999999999999999876542
Q ss_pred CCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCC-CCCC-CCccHHHHHHHHHHHHHHHHH
Q 009310 381 PNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDS-SGRP-LPATAQVAFQQADFAGWNLWA 447 (538)
Q Consensus 381 ~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~-~~~~-~~~~~~~A~~qg~~aa~~i~~ 447 (538)
.+++++++|+|.||+++|+ +.|+|||+|||+..++. .|++ .+++++.|.+||+.+|.||.+
T Consensus 266 -----~gl~~~~~g~i~vd~~~~t-~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 328 (472)
T 3iwa_A 266 -----AGLELDPRGAIIVDTRMRT-SDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLAD 328 (472)
T ss_dssp -----HTCCBCTTCCEECCTTCBC-SSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHTT
T ss_pred -----CCccCCCCCCEEECCCccc-CCCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhcC
Confidence 3688899999999999999 89999999999987654 2332 467889999999999999985
No 21
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=4.2e-38 Score=331.74 Aligned_cols=304 Identities=20% Similarity=0.282 Sum_probs=233.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcc-hhhhhcCCCCCccccccHHHHh-ccCCcEEEE
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM-LYELLSGEVDAWEIAPRFADLL-ANTGVQFFK 156 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~-~~~~~~g~~~~~~~~~~~~~~~-~~~~v~~~~ 156 (538)
+++|||||||+||+++|..|++.+ ++++|+|||+++.+.+.+. ++..+.+......+.....+.+ ++.+++++.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~----~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~ 78 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLK----PEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHL 78 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC----TTSEEEEECSSSCCC------------------------CTHHHHTTCEEET
T ss_pred cCcEEEECCcHHHHHHHHHHHHhC----cCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEe
Confidence 479999999999999999999853 5889999999998777663 4444444444444433333333 567899998
Q ss_pred e-eEEEEcCCCCcCcCCCceeecccEEEcCCc-eEEEeeEEEEeCCCCCCCCCCCCcc-ccCcCCCChHHHHHHHHHHHH
Q 009310 157 D-RVKLLCPSDHLGVNGPMACTHGGTVLLESG-LIVEYDWLVLSLGAEPKLDVVPGAA-EFAFPFSTLEDACRVDRKLSE 233 (538)
Q Consensus 157 ~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~yD~lVlAtG~~~~~p~ipG~~-~~~~~~~~~~d~~~~~~~l~~ 233 (538)
+ +|+.++...+ .+.++++ ..+.||+||+|||+.|+.|++||.+ +..+...+.+++..+.+.+..
T Consensus 79 ~~~v~~i~~~~~-------------~v~~~~g~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~~~~~~~~ 145 (449)
T 3kd9_A 79 NAEVIEVDTGYV-------------RVRENGGEKSYEWDYLVFANGASPQVPAIEGVNLKGVFTADLPPDALAIREYMEK 145 (449)
T ss_dssp TCEEEEECSSEE-------------EEECSSSEEEEECSEEEECCCEEECCCSCBTTTSTTEECSCSTHHHHHHHHHHSS
T ss_pred cCEEEEEecCCC-------------EEEECCceEEEEcCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHHh
Confidence 7 8999976653 4667776 4899999999999999999999975 445667788888777665421
Q ss_pred HHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCC-CChhhHHHHHHHHHhCCCEEEcCceee
Q 009310 234 LERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT-GTPGNREAALKVLSARKVQLVLGYFVR 312 (538)
Q Consensus 234 ~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~-~~~~~~~~~~~~l~~~gV~v~~~~~V~ 312 (538)
..+++|+|||+|++|+|+|..+.+.+.+ |+++++.+++++. +++++.+.+.+.+++. |++++++.|.
T Consensus 146 --------~~~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~-v~i~~~~~v~ 213 (449)
T 3kd9_A 146 --------YKVENVVIIGGGYIGIEMAEAFAAQGKN---VTMIVRGERVLRRSFDKEVTDILEEKLKKH-VNLRLQEITM 213 (449)
T ss_dssp --------SCCCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSTTTTTSCHHHHHHHHHHHTTT-SEEEESCCEE
T ss_pred --------cCCCeEEEECCCHHHHHHHHHHHhCCCe---EEEEEcCCccchhhcCHHHHHHHHHHHHhC-cEEEeCCeEE
Confidence 1267999999999999999999887765 9999999999997 8999999999999999 9999999999
Q ss_pred EEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcCC
Q 009310 313 CIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNA 392 (538)
Q Consensus 313 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~ 392 (538)
+++.++.. . ..+. +++++++|.||+|+|++|++++++. .++++++
T Consensus 214 ~i~~~~~v---------------------~-~v~~--------~g~~i~~D~Vv~a~G~~p~~~l~~~-----~gl~~~~ 258 (449)
T 3kd9_A 214 KIEGEERV---------------------E-KVVT--------DAGEYKAELVILATGIKPNIELAKQ-----LGVRIGE 258 (449)
T ss_dssp EEECSSSC---------------------C-EEEE--------TTEEEECSEEEECSCEEECCHHHHH-----TTCCBCT
T ss_pred EEeccCcE---------------------E-EEEe--------CCCEEECCEEEEeeCCccCHHHHHh-----CCccCCC
Confidence 99874310 1 1122 5678999999999999999877643 3688899
Q ss_pred CCCeeeCCCcccCCCCCEEEccccccccCC-CCC-CCCccHHHHHHHHHHHHHHHHH
Q 009310 393 RGQAETDETLCVKGHPRIFALGDSSALRDS-SGR-PLPATAQVAFQQADFAGWNLWA 447 (538)
Q Consensus 393 ~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~-~~~-~~~~~~~~A~~qg~~aa~~i~~ 447 (538)
+|+|.||+++|+ +.|+|||+|||+..++. .|. ..++++..|.+||+.+|.||.+
T Consensus 259 ~G~i~vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~g 314 (449)
T 3kd9_A 259 TGAIWTNEKMQT-SVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAG 314 (449)
T ss_dssp TSSBCCCTTCBC-SSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCEEECCCCcc-CCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhcC
Confidence 999999999999 99999999999986554 233 2468899999999999999985
No 22
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=6e-38 Score=330.83 Aligned_cols=301 Identities=21% Similarity=0.299 Sum_probs=240.6
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcc-hhhhhcCCC---CCccccccHHHHhccCCcEEE
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM-LYELLSGEV---DAWEIAPRFADLLANTGVQFF 155 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~-~~~~~~g~~---~~~~~~~~~~~~~~~~~v~~~ 155 (538)
+||||||||+||+++|..|++.+ +|++|+|||+++.+.+.+. ++.++.+.. .+..+...+.+.+.+.+++++
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~----~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~ 76 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADH----PDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQ 76 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC----TTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhC----cCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEE
Confidence 48999999999999999999842 4889999999987666554 444455543 355555566677778899997
Q ss_pred Ee-eEEEEcCCCCcCcCCCceeecccEEEcCC-----ceEEEeeEEEEeCCCCCCCCCCCCcc-ccCcCCCChHHHHHHH
Q 009310 156 KD-RVKLLCPSDHLGVNGPMACTHGGTVLLES-----GLIVEYDWLVLSLGAEPKLDVVPGAA-EFAFPFSTLEDACRVD 228 (538)
Q Consensus 156 ~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~-----g~~~~yD~lVlAtG~~~~~p~ipG~~-~~~~~~~~~~d~~~~~ 228 (538)
.+ +++.++.+.+ ++.+.+ +..+.||+||+|||++|+.|++||.+ +..+.+.++++...+.
T Consensus 77 ~~~~v~~i~~~~~-------------~v~v~~~~~g~~~~~~~d~lviAtGs~p~~p~i~g~~~~~v~~~~~~~~~~~~~ 143 (452)
T 2cdu_A 77 MRHQVTNVDPETK-------------TIKVKDLITNEEKTEAYDKLIMTTGSKPTVPPIPGIDSSRVYLCKNYNDAKKLF 143 (452)
T ss_dssp ESEEEEEEEGGGT-------------EEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTTTSTTEEECSSHHHHHHHH
T ss_pred eCCEEEEEEcCCC-------------EEEEEecCCCceEEEECCEEEEccCCCcCCCCCCCCCCCCEEEeCcHHHHHHHH
Confidence 65 6888876544 244322 56899999999999999999999975 4466677888877776
Q ss_pred HHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCC-CCChhhHHHHHHHHHhCCCEEEc
Q 009310 229 RKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICP-TGTPGNREAALKVLSARKVQLVL 307 (538)
Q Consensus 229 ~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~-~~~~~~~~~~~~~l~~~gV~v~~ 307 (538)
+.... +++|+|||+|.+|+|+|..+.+.+.+ |+++++.+.+++ .+++++.+.+.+.+++.||++++
T Consensus 144 ~~~~~----------~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~ 210 (452)
T 2cdu_A 144 EEAPK----------AKTITIIGSGYIGAELAEAYSNQNYN---VNLIDGHERVLYKYFDKEFTDILAKDYEAHGVNLVL 210 (452)
T ss_dssp HHGGG----------CSEEEEECCSHHHHHHHHHHHTTTCE---EEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHhcc----------CCeEEEECcCHHHHHHHHHHHhcCCE---EEEEEcCCchhhhhhhhhHHHHHHHHHHHCCCEEEc
Confidence 54321 68999999999999999999887665 999999999998 68999999999999999999999
Q ss_pred CceeeEEeccccccccccCCCCCcccccccccCCCceE-EeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccC
Q 009310 308 GYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYI-LELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLH 386 (538)
Q Consensus 308 ~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~ 386 (538)
++.|++++.++ +.+. +.+ +++++++|.||+|+|++|++++++. .
T Consensus 211 ~~~v~~i~~~~-----------------------~~v~~v~~-------~g~~i~~D~vv~a~G~~p~~~ll~~-----~ 255 (452)
T 2cdu_A 211 GSKVAAFEEVD-----------------------DEIITKTL-------DGKEIKSDIAILCIGFRPNTELLKG-----K 255 (452)
T ss_dssp SSCEEEEEEET-----------------------TEEEEEET-------TSCEEEESEEEECCCEEECCGGGTT-----T
T ss_pred CCeeEEEEcCC-----------------------CeEEEEEe-------CCCEEECCEEEECcCCCCCHHHHHH-----h
Confidence 99999998633 3332 221 5678999999999999999887653 2
Q ss_pred CCCcCCCCCeeeCCCcccCCCCCEEEccccccccCC-CCCC-CCccHHHHHHHHHHHHHHHHH
Q 009310 387 DLPLNARGQAETDETLCVKGHPRIFALGDSSALRDS-SGRP-LPATAQVAFQQADFAGWNLWA 447 (538)
Q Consensus 387 ~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~-~~~~-~~~~~~~A~~qg~~aa~~i~~ 447 (538)
++++++|+|.||+++|+ +.|+|||+|||+..++. .+++ .++++..|.+||+.+|.||.+
T Consensus 256 -l~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 316 (452)
T 2cdu_A 256 -VAMLDNGAIITDEYMHS-SNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLTE 316 (452)
T ss_dssp -SCBCTTSCBCCCTTSBC-SSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSSS
T ss_pred -hhcCCCCCEEECCCcCc-CCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhCC
Confidence 56778899999999999 99999999999986543 2221 357899999999999999974
No 23
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=100.00 E-value=3.3e-38 Score=335.85 Aligned_cols=323 Identities=19% Similarity=0.247 Sum_probs=239.7
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC-cc-hhhhhcCCC---------------------
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-PM-LYELLSGEV--------------------- 134 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~-p~-~~~~~~g~~--------------------- 134 (538)
..++|||||||+||++||..|++.. .+++|+|||++++++|. |. ...++.+..
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~----~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARD----PGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYF 85 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHS----TTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBS
T ss_pred CcCCEEEECChHHHHHHHHHHHhcC----CCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccc
Confidence 4579999999999999999998843 58899999999877653 22 222222110
Q ss_pred CCccccccHHHHh--ccCCcEEEEe-eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCCCCCCc
Q 009310 135 DAWEIAPRFADLL--ANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGA 211 (538)
Q Consensus 135 ~~~~~~~~~~~~~--~~~~v~~~~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p~ipG~ 211 (538)
.+.........+. .+.+++++.+ +|+.++...+ +|.+++|..+.||+||||||++|+.|+++|.
T Consensus 86 ~~~~~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~-------------~V~~~~g~~i~yd~lviATGs~p~~~~~~~~ 152 (493)
T 1m6i_A 86 QPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDN-------------MVKLNDGSQITYEKCLIATGGTPRSLSAIDR 152 (493)
T ss_dssp SCGGGSBCTTTTTTSTTCEEEEEETCCEEEEEGGGT-------------EEEETTSCEEEEEEEEECCCEEECCCHHHHT
T ss_pred cchHhhcchhhhhhhhcCCeEEEcCCEEEEEECCCC-------------EEEECCCCEEECCEEEECCCCCCCCCCCccc
Confidence 0000000001111 2457899986 8999987654 5888888899999999999999987776552
Q ss_pred -----cccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhc-CcEEEEecCCccCC-
Q 009310 212 -----AEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEK-GIVQAINVETTICP- 284 (538)
Q Consensus 212 -----~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~-~~Vtlv~~~~~~l~- 284 (538)
.+..+.+++.+++..++..+.. +++|+|||+|++|+|+|..|++.+.+. ..|+++++.+.++.
T Consensus 153 ~~~~~~~~v~~~~~~~d~~~l~~~~~~----------~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~ 222 (493)
T 1m6i_A 153 AGAEVKSRTTLFRKIGDFRSLEKISRE----------VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGK 222 (493)
T ss_dssp SCHHHHHTEEECCSHHHHHHHHHHHHH----------CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTT
T ss_pred ccccccCceEEEcCHHHHHHHHHHhhc----------CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccc
Confidence 2345567888888887766543 689999999999999999998876542 23999988776554
Q ss_pred CCChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccE
Q 009310 285 TGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADL 364 (538)
Q Consensus 285 ~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~ 364 (538)
.+++.+.+.+.+.++++||++++++.|++++.++ +.+.+.+. +|+++++|.
T Consensus 223 ~l~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~-----------------------~~~~v~l~------dG~~i~aD~ 273 (493)
T 1m6i_A 223 ILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSS-----------------------GKLLIKLK------DGRKVETDH 273 (493)
T ss_dssp TSCHHHHHHHHHHHHTTTCEEECSCCEEEEEEET-----------------------TEEEEEET------TSCEEEESE
T ss_pred cCCHHHHHHHHHHHHhcCCEEEeCCEEEEEEecC-----------------------CeEEEEEC------CCCEEECCE
Confidence 4578888999999999999999999999998643 33444433 678999999
Q ss_pred EEEecCCCCCCCCCCCCCCccCCCCcCC-CCCeeeCCCcccCCCCCEEEccccccccCCC-CCCCCccHHHHHHHHHHHH
Q 009310 365 VLWTVGSKPLLPHVEPPNNRLHDLPLNA-RGQAETDETLCVKGHPRIFALGDSSALRDSS-GRPLPATAQVAFQQADFAG 442 (538)
Q Consensus 365 vI~a~G~~p~~~~l~~~~~~~~~~~l~~-~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~-~~~~~~~~~~A~~qg~~aa 442 (538)
||+|+|.+|+++++.. .++++++ +|+|.||+++|+ .|+|||+|||+..+++. |+....++..|+.||+.+|
T Consensus 274 Vv~a~G~~pn~~l~~~-----~gl~~~~~~ggi~Vd~~l~t--~~~IyA~GD~a~~~~~~~g~~~~~~~~~A~~qg~~aa 346 (493)
T 1m6i_A 274 IVAAVGLEPNVELAKT-----GGLEIDSDFGGFRVNAELQA--RSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAG 346 (493)
T ss_dssp EEECCCEEECCTTHHH-----HTCCBCTTTCSEECCTTCEE--ETTEEECGGGEEEEETTTEEECCCCHHHHHHHHHHHH
T ss_pred EEECCCCCccHHHHHH-----cCCccccCCCcEEECCCccc--CCCeeEeeeeEeccCcccCccccchHHHHHHHHHHHH
Confidence 9999999999887653 3577775 689999999997 49999999999875542 3333457889999999999
Q ss_pred HHHHHHHCCCCCCCceecCcc
Q 009310 443 WNLWAAINDRPLLPFRFQNLG 463 (538)
Q Consensus 443 ~~i~~~l~~~~~~p~~~~~~g 463 (538)
.||.+........|++|++++
T Consensus 347 ~ni~g~~~~~~~~~~~~s~~~ 367 (493)
T 1m6i_A 347 ENMTGAAKPYWHQSMFWSDLG 367 (493)
T ss_dssp HHHTSCCCCCCCCCEEEEESS
T ss_pred HHhcCCCCCcCCcCceeeeec
Confidence 999864333344566666554
No 24
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=1.3e-37 Score=321.41 Aligned_cols=297 Identities=24% Similarity=0.328 Sum_probs=234.5
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcc-cCcchhhhhcCCCCCccccc-cHHHHhccCCcEEEE
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFV-FKPMLYELLSGEVDAWEIAP-RFADLLANTGVQFFK 156 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~-~~p~~~~~~~g~~~~~~~~~-~~~~~~~~~~v~~~~ 156 (538)
+++|||||||+||++||..|++.+ ...+|+|||+++... ..+++...+.+.....++.. .+..+++..+++++.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g----~~~~V~lie~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 79 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLD----GETPLLMITADDGRSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQLNARILT 79 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTC----SSSCEEEECSSCCCEECGGGGGGTTTTTCCHHHHEEECHHHHHHHTTCEEEC
T ss_pred CCcEEEECChHHHHHHHHHHHhhC----CCCCEEEEECCCCCccCcccccHHHhCCCCHHHhhccCHHHHHHhCCcEEEe
Confidence 479999999999999999999843 346899999987443 34555555544444444443 356666778899886
Q ss_pred e-eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCCCCCCcc-ccCcCCCChHHHHHHHHHHHHH
Q 009310 157 D-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAA-EFAFPFSTLEDACRVDRKLSEL 234 (538)
Q Consensus 157 ~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p~ipG~~-~~~~~~~~~~d~~~~~~~l~~~ 234 (538)
+ +++.++...+ ++.++++ .+.||+||+|||+.|..|++||.. +..+...+..++..++..+..
T Consensus 80 ~~~v~~i~~~~~-------------~v~~~~~-~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~- 144 (384)
T 2v3a_A 80 HTRVTGIDPGHQ-------------RIWIGEE-EVRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAAAG- 144 (384)
T ss_dssp SCCCCEEEGGGT-------------EEEETTE-EEECSEEEECCCEEECCCCCBSTTTTCEEECSSHHHHHHHHHHHTT-
T ss_pred CCEEEEEECCCC-------------EEEECCc-EEECCEEEEeCCCCcCCCCCCCcCcCCEEEECCHHHHHHHHHhhcc-
Confidence 4 6888876543 4666554 799999999999999999999975 456677788777766655422
Q ss_pred HHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCC-ChhhHHHHHHHHHhCCCEEEcCceeeE
Q 009310 235 ERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTG-TPGNREAALKVLSARKVQLVLGYFVRC 313 (538)
Q Consensus 235 ~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~-~~~~~~~~~~~l~~~gV~v~~~~~V~~ 313 (538)
+++++|||+|++|+|+|..+.+.+.+ |+++++.+.+++.. ++.+.+.+.+.+++.||++++++.|++
T Consensus 145 ---------~~~v~ViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~ 212 (384)
T 2v3a_A 145 ---------KRRVLLLGAGLIGCEFANDLSSGGYQ---LDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLAS 212 (384)
T ss_dssp ---------CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSSSTTTSCHHHHHHHHHHHHTTTCEEEESCCEEE
T ss_pred ---------CCeEEEECCCHHHHHHHHHHHhCCCe---EEEEecCcchhhcccCHHHHHHHHHHHHHcCCEEEeCCEEEE
Confidence 68999999999999999999987765 99999999988874 888899999999999999999999999
Q ss_pred EeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcCCC
Q 009310 314 IRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNAR 393 (538)
Q Consensus 314 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~ 393 (538)
++.++ +++.+.+. +|+++++|.||+|+|.+|++++++. .+++++ +
T Consensus 213 i~~~~-----------------------~~~~v~~~------~g~~i~~d~vv~a~G~~p~~~l~~~-----~g~~~~-~ 257 (384)
T 2v3a_A 213 LKKAG-----------------------EGLEAHLS------DGEVIPCDLVVSAVGLRPRTELAFA-----AGLAVN-R 257 (384)
T ss_dssp EEEET-----------------------TEEEEEET------TSCEEEESEEEECSCEEECCHHHHH-----TTCCBS-S
T ss_pred EEecC-----------------------CEEEEEEC------CCCEEECCEEEECcCCCcCHHHHHH-----CCCCCC-C
Confidence 98644 34445432 6788999999999999999876543 356676 5
Q ss_pred CCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHH
Q 009310 394 GQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWA 447 (538)
Q Consensus 394 G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~ 447 (538)
| |.||+++|+ +.|+|||+|||+.... .....+..|.+||+.+|+||.+
T Consensus 258 g-i~vd~~~~t-~~~~IyA~GD~~~~~~----~~~~~~~~a~~~g~~~a~~i~g 305 (384)
T 2v3a_A 258 G-IVVDRSLRT-SHANIYALGDCAEVDG----LNLLYVMPLMACARALAQTLAG 305 (384)
T ss_dssp S-EEECTTCBC-SSTTEEECGGGEEETT----BCCCSHHHHHHHHHHHHHHHTT
T ss_pred C-EEECCCCCC-CCCCEEEeeeeeeECC----CCcchHHHHHHHHHHHHHHhcC
Confidence 7 999999998 8999999999997521 1134677899999999999974
No 25
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=1.2e-36 Score=320.55 Aligned_cols=303 Identities=23% Similarity=0.337 Sum_probs=238.5
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcc-hhhhhcCCC-CCccccccHHHHhccCCcEEEE-
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM-LYELLSGEV-DAWEIAPRFADLLANTGVQFFK- 156 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~-~~~~~~g~~-~~~~~~~~~~~~~~~~~v~~~~- 156 (538)
+||||||||+||++||..|++.+ +|++|+|||+++.+.|.+. ++..+.+.. ..+++...+.+.+++.+++++.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~----~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~ 76 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLH----PDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSN 76 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC----TTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEEEET
T ss_pred CeEEEECCCHHHHHHHHHHHHhC----cCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHHCCCEEEEC
Confidence 48999999999999999999842 4889999999988776653 444444543 3455555566677778999966
Q ss_pred eeEEEEcCCCCcCcCCCceeecccEEEcC---Cce--EEEeeEEEEeCCCCCCCCCCCCcc-ccCcCCCChHHHHHHHHH
Q 009310 157 DRVKLLCPSDHLGVNGPMACTHGGTVLLE---SGL--IVEYDWLVLSLGAEPKLDVVPGAA-EFAFPFSTLEDACRVDRK 230 (538)
Q Consensus 157 ~~v~~i~~~~~~~~~~~~~~~~~~~v~~~---~g~--~~~yD~lVlAtG~~~~~p~ipG~~-~~~~~~~~~~d~~~~~~~ 230 (538)
..++.++.+.+ ++.+. +|. ++.||+||+|||+.|..|++||.+ ++++.+.+.+++..+++.
T Consensus 77 ~~v~~i~~~~~-------------~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~ 143 (447)
T 1nhp_A 77 TEITAIQPKEH-------------QVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLKQK 143 (447)
T ss_dssp EEEEEEETTTT-------------EEEEEETTTCCEEEEECSEEEECCCEEECCCCSTTTTSBSEECCCHHHHHHHHHHH
T ss_pred CEEEEEeCCCC-------------EEEEEecCCCceEEEeCCEEEEcCCCCcCCCCCCCCCCCCeEEECCHHHHHHHHHH
Confidence 58888877654 24442 343 489999999999999999999985 456667777887777665
Q ss_pred HHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCC-CCChhhHHHHHHHHHhCCCEEEcCc
Q 009310 231 LSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICP-TGTPGNREAALKVLSARKVQLVLGY 309 (538)
Q Consensus 231 l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~-~~~~~~~~~~~~~l~~~gV~v~~~~ 309 (538)
+.. ..+++++|||+|++|+|+|..+++.+.+ |+++++.+.+++ .+++++.+.+.+.+++.||++++++
T Consensus 144 ~~~--------~~~~~vvIiG~G~~g~e~A~~l~~~g~~---Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~gv~i~~~~ 212 (447)
T 1nhp_A 144 TVD--------PEVNNVVVIGSGYIGIEAAEAFAKAGKK---VTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATGE 212 (447)
T ss_dssp HTC--------TTCCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEEEESC
T ss_pred hhh--------cCCCeEEEECCCHHHHHHHHHHHHCCCe---EEEEecCcccccccCCHHHHHHHHHHHHhCCCEEEcCC
Confidence 420 0168999999999999999999887665 999999999888 5889999999999999999999999
Q ss_pred eeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCC
Q 009310 310 FVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLP 389 (538)
Q Consensus 310 ~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~ 389 (538)
.|++++.++ ....+.+ +++++++|.||+|+|.+|+.++++. . ++
T Consensus 213 ~v~~i~~~~-----------------------~v~~v~~-------~~~~i~~d~vi~a~G~~p~~~~~~~-----~-~~ 256 (447)
T 1nhp_A 213 TVERYEGDG-----------------------RVQKVVT-------DKNAYDADLVVVAVGVRPNTAWLKG-----T-LE 256 (447)
T ss_dssp CEEEEECSS-----------------------BCCEEEE-------SSCEEECSEEEECSCEEESCGGGTT-----T-SC
T ss_pred EEEEEEccC-----------------------cEEEEEE-------CCCEEECCEEEECcCCCCChHHHHh-----h-hh
Confidence 999998742 1112221 3467999999999999999887653 2 56
Q ss_pred cCCCCCeeeCCCcccCCCCCEEEccccccccCC-CCCC-CCccHHHHHHHHHHHHHHHHH
Q 009310 390 LNARGQAETDETLCVKGHPRIFALGDSSALRDS-SGRP-LPATAQVAFQQADFAGWNLWA 447 (538)
Q Consensus 390 l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~-~~~~-~~~~~~~A~~qg~~aa~~i~~ 447 (538)
++++|+|.||+++|+ +.|+|||+|||+..... .+++ .++++..|.+||+.+|.||.+
T Consensus 257 ~~~~G~i~Vd~~~~t-~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 315 (447)
T 1nhp_A 257 LHPNGLIKTDEYMRT-SEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLEE 315 (447)
T ss_dssp BCTTSCBCCCTTCBC-SSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSSS
T ss_pred hcCCCcEEECccccC-CCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhcC
Confidence 778899999999999 89999999999986432 1221 357899999999999999974
No 26
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=2e-36 Score=320.47 Aligned_cols=288 Identities=21% Similarity=0.297 Sum_probs=221.8
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCc----------c------------hhhhhcCC--
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP----------M------------LYELLSGE-- 133 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p----------~------------~~~~~~g~-- 133 (538)
.++||||||||+||+++|.+|++ .|++|+|||++. ++... + .+. ..|.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~------~g~~V~lie~~~-~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~-~~g~~~ 74 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVE------QGAQVTLIERGT-IGGTCVNVGCVPSKIMIRAAHIAHLRRESPF-DGGIAA 74 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSS-TTHHHHHHSHHHHHHHHHHHHHHHHHHCCTT-TTTSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHH------CCCEEEEEeCCC-CCccccCCCccchHHHHHHHHHHHHHhhhhh-cCCccC
Confidence 35899999999999999999998 678999999984 21110 0 000 0011
Q ss_pred ----CCCccccc------------cHHHHhccC-CcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcCCc--eEEEeeE
Q 009310 134 ----VDAWEIAP------------RFADLLANT-GVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG--LIVEYDW 194 (538)
Q Consensus 134 ----~~~~~~~~------------~~~~~~~~~-~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g--~~~~yD~ 194 (538)
.+...+.. .+.+++++. +++++.+++..++.... ++.+++| ..+.||+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~-------------~v~~~~g~~~~~~~d~ 141 (467)
T 1zk7_A 75 TVPTIDRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQSL-------------TVRLNEGGERVVMFDR 141 (467)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEETTEE-------------EEEETTSSEEEEECSE
T ss_pred CCCccCHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccCCEE-------------EEEeCCCceEEEEeCE
Confidence 01111110 123445566 89999998888875432 4666666 6899999
Q ss_pred EEEeCCCCCCCCCCCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEE
Q 009310 195 LVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQ 274 (538)
Q Consensus 195 lVlAtG~~~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vt 274 (538)
||+|||+.|+.|++||.+.. .+.+.+++..+.. .+++|+|||+|++|+|+|..+.+.+.+ |+
T Consensus 142 lviAtGs~p~~p~i~G~~~~--~~~~~~~~~~~~~-------------~~~~vvViGgG~~g~E~A~~l~~~g~~---Vt 203 (467)
T 1zk7_A 142 CLVATGASPAVPPIPGLKES--PYWTSTEALASDT-------------IPERLAVIGSSVVALELAQAFARLGSK---VT 203 (467)
T ss_dssp EEECCCEEECCCCCTTTTTS--CCBCHHHHHHCSS-------------CCSEEEEECCSHHHHHHHHHHHHTTCE---EE
T ss_pred EEEeCCCCCCCCCCCCCCcC--ceecHHHHhcccc-------------cCCEEEEECCCHHHHHHHHHHHHcCCE---EE
Confidence 99999999999999997543 2345555443321 268999999999999999999887766 99
Q ss_pred EEecCCccCCCCChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccC
Q 009310 275 AINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKG 354 (538)
Q Consensus 275 lv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 354 (538)
++++.+.+++ +++.+.+.+.+.+++.||++++++.|++++.++ +.+.+.+
T Consensus 204 lv~~~~~~l~-~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-----------------------~~~~v~~------ 253 (467)
T 1zk7_A 204 VLARNTLFFR-EDPAIGEAVTAAFRAEGIEVLEHTQASQVAHMD-----------------------GEFVLTT------ 253 (467)
T ss_dssp EECSSCTTTT-SCHHHHHHHHHHHHHTTCEEETTCCEEEEEEET-----------------------TEEEEEE------
T ss_pred EEEECCccCC-CCHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC-----------------------CEEEEEE------
Confidence 9999999999 899999999999999999999999999998643 3333432
Q ss_pred CcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHH
Q 009310 355 LESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVA 434 (538)
Q Consensus 355 ~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A 434 (538)
++.++++|.||+|+|.+|+++++.. ...+++++++|+|.||+++|+ +.|+|||+|||+.. +..+..|
T Consensus 254 -~~~~i~aD~Vv~a~G~~p~~~~l~l---~~~gl~~~~~G~i~vd~~~~t-~~~~iya~GD~~~~--------~~~~~~A 320 (467)
T 1zk7_A 254 -THGELRADKLLVATGRTPNTRSLAL---DAAGVTVNAQGAIVIDQGMRT-SNPNIYAAGDCTDQ--------PQFVYVA 320 (467)
T ss_dssp -TTEEEEESEEEECSCEEESCTTSCG---GGGTCCBCTTSCBCCCTTCBC-SSTTEEECSTTBSS--------CCCHHHH
T ss_pred -CCcEEEcCEEEECCCCCcCCCcCCc---hhcCCcCCCCCCEEECCCccc-CCCCEEEEeccCCC--------cccHHHH
Confidence 3457999999999999999875421 134678888999999999998 89999999999986 6788999
Q ss_pred HHHHHHHHHHHHH
Q 009310 435 FQQADFAGWNLWA 447 (538)
Q Consensus 435 ~~qg~~aa~~i~~ 447 (538)
.+||+.+|.||..
T Consensus 321 ~~~g~~aa~~i~~ 333 (467)
T 1zk7_A 321 AAAGTRAAINMTG 333 (467)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcC
Confidence 9999999999975
No 27
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=5.8e-37 Score=308.01 Aligned_cols=306 Identities=20% Similarity=0.169 Sum_probs=220.4
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCC--CCcccCcchhhhhc-CCCCCccccccHHHHhccCCcE
Q 009310 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQS--ERFVFKPMLYELLS-GEVDAWEIAPRFADLLANTGVQ 153 (538)
Q Consensus 77 ~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~--~~~~~~p~~~~~~~-g~~~~~~~~~~~~~~~~~~~v~ 153 (538)
.+++||+|||||+||+++|..|++ .|++|+|||++ ..+.+.+....+.. ......++...+.+.+.+.+++
T Consensus 13 ~~~~~vvIIG~G~aGl~aA~~l~~------~g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 86 (323)
T 3f8d_A 13 GEKFDVIIVGLGPAAYGAALYSAR------YMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVP 86 (323)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCC
T ss_pred CCccCEEEECccHHHHHHHHHHHH------CCCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCE
Confidence 345899999999999999999999 67899999997 11111111111111 0112234455566777778898
Q ss_pred EEEeeEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCCCCCCccccCcCCCChHHHHHHHHHHHH
Q 009310 154 FFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSE 233 (538)
Q Consensus 154 ~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~ 233 (538)
++..+|+.++.+.+. ..+.++++..+.||+||+|||+.|..|.+||...+............. ..
T Consensus 87 ~~~~~v~~i~~~~~~-----------~~v~~~~g~~~~~d~lvlAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~--~~-- 151 (323)
T 3f8d_A 87 VLLDIVEKIENRGDE-----------FVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVADA--PL-- 151 (323)
T ss_dssp EEESCEEEEEEC--C-----------EEEEESSSCEEEEEEEEECCCCEECCCCCTTTTTTBTTTEESCHHHHG--GG--
T ss_pred EEEEEEEEEEecCCE-----------EEEEECCCCEEEcCEEEECcCCCCccCCCCchhhhcCCceEEeccCCH--hH--
Confidence 888999999766431 257777878999999999999999999999976432111000111110 00
Q ss_pred HHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEEcCceeeE
Q 009310 234 LERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRC 313 (538)
Q Consensus 234 ~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~ 313 (538)
..+++|+|||+|.+|+|+|..|.+.+.+ |+++++.+.+++ .+ ..+.+.+++.||++++++.|++
T Consensus 152 --------~~~~~v~vvG~G~~~~e~a~~l~~~g~~---v~~~~~~~~~~~--~~---~~~~~~~~~~gv~~~~~~~v~~ 215 (323)
T 3f8d_A 152 --------FKNRVVAVIGGGDSALEGAEILSSYSTK---VYLIHRRDTFKA--QP---IYVETVKKKPNVEFVLNSVVKE 215 (323)
T ss_dssp --------GTTCEEEEECCSHHHHHHHHHHHHHSSE---EEEECSSSSCCS--CH---HHHHHHHTCTTEEEECSEEEEE
T ss_pred --------cCCCEEEEECCCHHHHHHHHHHHHhCCe---EEEEEeCCCCCc--CH---HHHHHHHhCCCcEEEeCCEEEE
Confidence 0157999999999999999999988665 999999888765 12 2233344456999999999999
Q ss_pred EeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcCCC
Q 009310 314 IRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNAR 393 (538)
Q Consensus 314 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~ 393 (538)
+..++.. ..+++.. .. +++..++++|.||+|+|++|+.+++.. .+++++++
T Consensus 216 i~~~~~~---------------------~~v~~~~--~~-~g~~~~~~~D~vv~a~G~~p~~~~~~~-----~g~~~~~~ 266 (323)
T 3f8d_A 216 IKGDKVV---------------------KQVVVEN--LK-TGEIKELNVNGVFIEIGFDPPTDFAKS-----NGIETDTN 266 (323)
T ss_dssp EEESSSE---------------------EEEEEEE--TT-TCCEEEEECSEEEECCCEECCHHHHHH-----TTCCBCTT
T ss_pred EeccCce---------------------eEEEEEE--CC-CCceEEEEcCEEEEEECCCCChhHHhh-----cCeeecCC
Confidence 9875311 2344441 00 112347999999999999999877654 35788899
Q ss_pred CCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHCCCCC
Q 009310 394 GQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPL 454 (538)
Q Consensus 394 G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~~~~~ 454 (538)
|+|.||+++++ +.|+|||+|||+..+ +.++.+..|+.||+.+|.||.+.+.+++.
T Consensus 267 g~i~vd~~~~t-~~~~vya~GD~~~~~-----~~~~~~~~A~~~g~~aa~~i~~~l~~~~~ 321 (323)
T 3f8d_A 267 GYIKVDEWMRT-SVPGVFAAGDCTSAW-----LGFRQVITAVAQGAVAATSAYRYVTEKKG 321 (323)
T ss_dssp SSBCCCTTCBC-SSTTEEECSTTBSTT-----TTCCCHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred CcEecCCCcee-cCCCEEEcceecCCC-----CcccceeehhhHHHHHHHHHHHHHHHhhc
Confidence 99999999998 999999999999852 23689999999999999999999987654
No 28
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=4e-37 Score=324.79 Aligned_cols=292 Identities=20% Similarity=0.232 Sum_probs=222.3
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC-------c---chh-----hhh-----cCC-----
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-------P---MLY-----ELL-----SGE----- 133 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~-------p---~~~-----~~~-----~g~----- 133 (538)
++||+|||||+||++||..|++ .|++|+|||++ .+... | ++. ..+ .|.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~------~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~ 75 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQ------LGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENV 75 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH------TTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSC
T ss_pred cCCEEEECCCHHHHHHHHHHHh------CCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 4799999999999999999998 67899999998 32211 0 000 000 010
Q ss_pred -CCCcc-----------ccccHHHHhccCCcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcCCc-eEEEeeEEEEeCC
Q 009310 134 -VDAWE-----------IAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG-LIVEYDWLVLSLG 200 (538)
Q Consensus 134 -~~~~~-----------~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~yD~lVlAtG 200 (538)
.+... +...+.+.++..+++++.+.+..++.... .+.+.++ ..+.||+||+|||
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~id~~~v-------------~V~~~~G~~~i~~d~lViATG 142 (455)
T 1ebd_A 76 TIDFAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANTV-------------RVVNGDSAQTYTFKNAIIATG 142 (455)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEEEETTEE-------------EEEETTEEEEEECSEEEECCC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeE-------------EEEeCCCcEEEEeCEEEEecC
Confidence 00001 11112345567789999987766654321 4666666 6899999999999
Q ss_pred CCCCCCCCCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCC
Q 009310 201 AEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVET 280 (538)
Q Consensus 201 ~~~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~ 280 (538)
+.|..|+++|.+.. +.+.+++..+.. .+++|+|||+|++|+|+|..+++.+.+ |+++++.+
T Consensus 143 s~p~~~~~~g~~~~---v~~~~~~~~~~~-------------~~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~ 203 (455)
T 1ebd_A 143 SRPIELPNFKFSNR---ILDSTGALNLGE-------------VPKSLVVIGGGYIGIELGTAYANFGTK---VTILEGAG 203 (455)
T ss_dssp EEECCBTTBCCCSS---EECHHHHHTCSS-------------CCSEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSS
T ss_pred CCCCCCCCCCccce---EecHHHHhcccc-------------CCCeEEEECCCHHHHHHHHHHHHcCCc---EEEEEcCC
Confidence 99999988886432 345555443221 268999999999999999999887765 99999999
Q ss_pred ccCCCCChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEE
Q 009310 281 TICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIF 360 (538)
Q Consensus 281 ~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l 360 (538)
++++.+++++.+.+.+.|++.||++++++.|++++.++ +++.+.+. .+++++++
T Consensus 204 ~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-----------------------~~~~v~~~---~~g~~~~~ 257 (455)
T 1ebd_A 204 EILSGFEKQMAAIIKKRLKKKGVEVVTNALAKGAEERE-----------------------DGVTVTYE---ANGETKTI 257 (455)
T ss_dssp SSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEET-----------------------TEEEEEEE---ETTEEEEE
T ss_pred ccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC-----------------------CeEEEEEE---eCCceeEE
Confidence 99999999999999999999999999999999998744 34444432 12256789
Q ss_pred eccEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHH
Q 009310 361 EADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADF 440 (538)
Q Consensus 361 ~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~ 440 (538)
++|.||+|+|.+|+++++... ..+++++++|+|.||+++|+ +.|+|||+|||+.. ++.+..|.+||+.
T Consensus 258 ~~D~vv~a~G~~p~~~~l~~~---~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~--------~~~~~~A~~~g~~ 325 (455)
T 1ebd_A 258 DADYVLVTVGRRPNTDELGLE---QIGIKMTNRGLIEVDQQCRT-SVPNIFAIGDIVPG--------PALAHKASYEGKV 325 (455)
T ss_dssp EESEEEECSCEEESCSSSSTT---TTTCCBCTTSCBCCCTTCBC-SSTTEEECGGGSSS--------CCCHHHHHHHHHH
T ss_pred EcCEEEECcCCCcccCcCChh---hcCCccCCCCCEeeCCCccc-CCCCEEEEeccCCC--------cccHHHHHHHHHH
Confidence 999999999999998874211 23678888999999999998 99999999999985 6788999999999
Q ss_pred HHHHHHH
Q 009310 441 AGWNLWA 447 (538)
Q Consensus 441 aa~~i~~ 447 (538)
+|.||.+
T Consensus 326 aa~~i~~ 332 (455)
T 1ebd_A 326 AAEAIAG 332 (455)
T ss_dssp HHHHHTS
T ss_pred HHHHHcC
Confidence 9999974
No 29
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=4.6e-37 Score=326.05 Aligned_cols=297 Identities=16% Similarity=0.218 Sum_probs=224.4
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC----------cchh-----------hhh-cCC--
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK----------PMLY-----------ELL-SGE-- 133 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~----------p~~~-----------~~~-~g~-- 133 (538)
+++||||||||+||+++|..|++ .|++|+|||+++.++.. .++. ... .|.
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~------~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~ 78 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQ------LGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEM 78 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH------TTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHh------CCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCcccc
Confidence 34799999999999999999998 57899999998754221 1110 000 010
Q ss_pred ----CCCcccc-----------ccHHHHhccCCcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcCC-c-eEEEeeEEE
Q 009310 134 ----VDAWEIA-----------PRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLES-G-LIVEYDWLV 196 (538)
Q Consensus 134 ----~~~~~~~-----------~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~-g-~~~~yD~lV 196 (538)
.+...+. ..+..+++..+++++.+.+..++.... .+.+.+ + ..+.||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~-------------~v~~~~gg~~~~~~d~lV 145 (474)
T 1zmd_A 79 SEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQV-------------TATKADGGTQVIDTKNIL 145 (474)
T ss_dssp SCEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEEETTEE-------------EEECTTSCEEEEEEEEEE
T ss_pred CCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEE-------------EEEecCCCcEEEEeCEEE
Confidence 0001110 112445566789999987776754321 466555 4 579999999
Q ss_pred EeCCCCCCCCCCCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEE
Q 009310 197 LSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAI 276 (538)
Q Consensus 197 lAtG~~~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv 276 (538)
+|||+.|..|++||.+.. .+.+.+++..+.. .+++|+|||+|++|+|+|..+.+.+.+ |+++
T Consensus 146 iAtGs~p~~p~i~g~~~~--~v~t~~~~~~~~~-------------~~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv 207 (474)
T 1zmd_A 146 IATGSEVTPFPGITIDED--TIVSSTGALSLKK-------------VPEKMVVIGAGVIGVELGSVWQRLGAD---VTAV 207 (474)
T ss_dssp ECCCEEECCCTTCCCCSS--SEECHHHHTTCSS-------------CCSEEEEECCSHHHHHHHHHHHHTTCE---EEEE
T ss_pred ECCCCCCCCCCCCCCCcC--cEEcHHHHhhccc-------------cCceEEEECCCHHHHHHHHHHHHcCCE---EEEE
Confidence 999999999999987532 2334554433211 268999999999999999999887765 9999
Q ss_pred ecCCccCC-CCChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCc-eEEeecccccC
Q 009310 277 NVETTICP-TGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDK-YILELQPAIKG 354 (538)
Q Consensus 277 ~~~~~~l~-~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~ 354 (538)
++.+++++ .+++++.+.+.+.|++.||++++++.|++++.++ ++ +.+.+.+. ..
T Consensus 208 ~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-----------------------~~~~~v~~~~~-~~ 263 (474)
T 1zmd_A 208 EFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKS-----------------------DGKIDVSIEAA-SG 263 (474)
T ss_dssp CSSSSSSCSSCCHHHHHHHHHHHHHTTCEEECSEEEEEEEECT-----------------------TSCEEEEEEET-TS
T ss_pred eccCccCCcccCHHHHHHHHHHHHHCCCEEEeCceEEEEEEcC-----------------------CceEEEEEEec-CC
Confidence 99999999 8899999999999999999999999999998754 23 44443210 12
Q ss_pred CcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHH
Q 009310 355 LESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVA 434 (538)
Q Consensus 355 ~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A 434 (538)
++++++++|.||+|+|.+|+++++.. ...+++++++|+|.||+++|+ +.|+|||+|||+.. ++.+..|
T Consensus 264 ~~~~~i~~D~vv~a~G~~p~~~~l~l---~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~--------~~~~~~A 331 (474)
T 1zmd_A 264 GKAEVITCDVLLVCIGRRPFTKNLGL---EELGIELDPRGRIPVNTRFQT-KIPNIYAIGDVVAG--------PMLAHKA 331 (474)
T ss_dssp CCCEEEEESEEEECSCEEECCTTSSH---HHHTCCCCTTSCCCCCTTCBC-SSTTEEECGGGSSS--------CCCHHHH
T ss_pred CCceEEEcCEEEECcCCCcCCCcCCc---hhcCCccCCCCCEEECcCCcc-CCCCEEEeeecCCC--------CccHHHH
Confidence 36778999999999999999887421 123677888899999999998 89999999999985 6789999
Q ss_pred HHHHHHHHHHHHH
Q 009310 435 FQQADFAGWNLWA 447 (538)
Q Consensus 435 ~~qg~~aa~~i~~ 447 (538)
.+||+.+|.||.+
T Consensus 332 ~~~g~~aa~~i~~ 344 (474)
T 1zmd_A 332 EDEGIICVEGMAG 344 (474)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcC
Confidence 9999999999985
No 30
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-36 Score=320.44 Aligned_cols=289 Identities=21% Similarity=0.266 Sum_probs=220.3
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC-------c---chh-----hhhc-----CC----
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-------P---MLY-----ELLS-----GE---- 133 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~-------p---~~~-----~~~~-----g~---- 133 (538)
.++||+|||||+||++||..|++ .|++|+|||++. ++.. | ++. ..+. +.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~------~g~~V~liE~~~-~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~ 82 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAAS------YGAKTLLVEAKA-LGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNL 82 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH------TSCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTS
T ss_pred ccCCEEEEcCCHHHHHHHHHHHH------CCCcEEEEeCCC-cCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCccccc
Confidence 34799999999999999999998 688999999974 2111 0 000 0000 00
Q ss_pred --------CCCcccc-----------ccHHHHhccCCcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcCCce--EEEe
Q 009310 134 --------VDAWEIA-----------PRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGL--IVEY 192 (538)
Q Consensus 134 --------~~~~~~~-----------~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~--~~~y 192 (538)
.+...+. ..+...++..+++++.+++..++.... .+.++++. .+.|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~-------------~v~~~~g~~~~~~~ 149 (479)
T 2hqm_A 83 PLDKEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDGNV-------------EVQKRDNTTEVYSA 149 (479)
T ss_dssp CCSGGGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECTTSCE-------------EEEESSSCCEEEEE
T ss_pred ccccccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEE-------------EEEeCCCcEEEEEe
Confidence 0000000 112234456789999998887764332 45556665 7999
Q ss_pred eEEEEeCCCCCCCC-CCCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcC
Q 009310 193 DWLVLSLGAEPKLD-VVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKG 271 (538)
Q Consensus 193 D~lVlAtG~~~~~p-~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~ 271 (538)
|+||+|||+.|..| ++||.+ . ..+.++...+.. .+++++|||+|++|+|+|..+.+.+.+
T Consensus 150 d~lviAtGs~p~~p~~i~g~~-~---~~~~~~~~~l~~-------------~~~~vvViGgG~ig~E~A~~l~~~g~~-- 210 (479)
T 2hqm_A 150 NHILVATGGKAIFPENIPGFE-L---GTDSDGFFRLEE-------------QPKKVVVVGAGYIGIELAGVFHGLGSE-- 210 (479)
T ss_dssp EEEEECCCEEECCCTTSTTGG-G---SBCHHHHHHCSS-------------CCSEEEEECSSHHHHHHHHHHHHTTCE--
T ss_pred CEEEEcCCCCCCCCCCCCCcc-c---ccchHHHhcccc-------------cCCeEEEECCCHHHHHHHHHHHHcCCc--
Confidence 99999999999999 899973 2 234444443321 268999999999999999999987765
Q ss_pred cEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeeccc
Q 009310 272 IVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPA 351 (538)
Q Consensus 272 ~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 351 (538)
|+++++.+++++.+++.+.+.+.+.|++.||++++++.|++++.+++. ..+.+.+.
T Consensus 211 -Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~---------------------~~~~v~~~-- 266 (479)
T 2hqm_A 211 -THLVIRGETVLRKFDECIQNTITDHYVKEGINVHKLSKIVKVEKNVET---------------------DKLKIHMN-- 266 (479)
T ss_dssp -EEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECC-C---------------------CCEEEEET--
T ss_pred -eEEEEeCCccccccCHHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCC---------------------cEEEEEEC--
Confidence 999999999999999999999999999999999999999999874310 12444432
Q ss_pred ccCCcc-eEEeccEEEEecCCCCCCCC-CCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCc
Q 009310 352 IKGLES-QIFEADLVLWTVGSKPLLPH-VEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPA 429 (538)
Q Consensus 352 ~~~~~g-~~l~~D~vI~a~G~~p~~~~-l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~ 429 (538)
+| +++++|.||+|+|++|++.+ ++ ..+++++++|+|.||+++|+ +.|+|||+|||+.. +.
T Consensus 267 ----~G~~~i~~D~vv~a~G~~p~~~l~l~-----~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~--------~~ 328 (479)
T 2hqm_A 267 ----DSKSIDDVDELIWTIGRKSHLGMGSE-----NVGIKLNSHDQIIADEYQNT-NVPNIYSLGDVVGK--------VE 328 (479)
T ss_dssp ----TSCEEEEESEEEECSCEEECCCSSGG-----GGTCCBCTTSCBCCCTTCBC-SSTTEEECGGGTTS--------SC
T ss_pred ----CCcEEEEcCEEEECCCCCCccccChh-----hcCceECCCCCEeECCCCcc-CCCCEEEEEecCCC--------cc
Confidence 56 78999999999999999854 33 34688888999999999998 99999999999864 67
Q ss_pred cHHHHHHHHHHHHHHHHH
Q 009310 430 TAQVAFQQADFAGWNLWA 447 (538)
Q Consensus 430 ~~~~A~~qg~~aa~~i~~ 447 (538)
.+..|.+||+.+|.||.+
T Consensus 329 ~~~~A~~~g~~aa~~i~~ 346 (479)
T 2hqm_A 329 LTPVAIAAGRKLSNRLFG 346 (479)
T ss_dssp CHHHHHHHHHHHHHHHHS
T ss_pred cHHHHHHHHHHHHHHhcC
Confidence 899999999999999985
No 31
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=6.7e-37 Score=324.56 Aligned_cols=297 Identities=21% Similarity=0.266 Sum_probs=222.9
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcch----h------------h----hh-cCC---
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPML----Y------------E----LL-SGE--- 133 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~----~------------~----~~-~g~--- 133 (538)
.++||+|||||+||+++|..|++ .|++|+|||+++.+...... + . .. .|.
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~------~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~ 78 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQ------LGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVS 78 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHH------HTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEES
T ss_pred ccCCEEEECCCHHHHHHHHHHHH------CCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 45899999999999999999998 57899999998755332110 0 0 00 010
Q ss_pred ---CCCccc-----------cccHHHHhccCCcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcCCc--eEEEeeEEEE
Q 009310 134 ---VDAWEI-----------APRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG--LIVEYDWLVL 197 (538)
Q Consensus 134 ---~~~~~~-----------~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g--~~~~yD~lVl 197 (538)
.+...+ ...+...++..+++++.+.+..++.... .+.+++| ..+.||+||+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~-------------~v~~~~G~~~~i~~d~lIi 145 (470)
T 1dxl_A 79 NVEIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEI-------------SVDTIEGENTVVKGKHIII 145 (470)
T ss_dssp CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEEETTEE-------------EECCSSSCCEEEECSEEEE
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEE-------------EEEeCCCceEEEEcCEEEE
Confidence 000110 0112334455689999887666654321 4555566 6899999999
Q ss_pred eCCCCCCCCCCCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEe
Q 009310 198 SLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAIN 277 (538)
Q Consensus 198 AtG~~~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~ 277 (538)
|||+.|..|+++|.+.. .+.+.+++..+.. .+++|+|||+|++|+|+|..+.+.+.+ |++++
T Consensus 146 AtGs~p~~p~~~g~~~~--~v~~~~~~~~~~~-------------~~~~vvViGgG~~g~e~A~~l~~~g~~---Vtli~ 207 (470)
T 1dxl_A 146 ATGSDVKSLPGVTIDEK--KIVSSTGALALSE-------------IPKKLVVIGAGYIGLEMGSVWGRIGSE---VTVVE 207 (470)
T ss_dssp CCCEEECCBTTBCCCSS--SEECHHHHTTCSS-------------CCSEEEESCCSHHHHHHHHHHHHHTCE---EEEEC
T ss_pred CCCCCCCCCCCCCCCcc--cEEeHHHhhhhhh-------------cCCeEEEECCCHHHHHHHHHHHHcCCc---EEEEE
Confidence 99999999988886431 2334444433211 268999999999999999999988766 99999
Q ss_pred cCCccCCCCChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcc
Q 009310 278 VETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLES 357 (538)
Q Consensus 278 ~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g 357 (538)
+.+++++.+++++.+.+.+.|++.||++++++.|.+++.++ +++.+.+.+.. ++++
T Consensus 208 ~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-----------------------~~~~v~~~~~~-~g~~ 263 (470)
T 1dxl_A 208 FASEIVPTMDAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSG-----------------------DGVKLTVEPSA-GGEQ 263 (470)
T ss_dssp SSSSSSTTSCHHHHHHHHHHHHHSSCCEECSEEEEEEECSS-----------------------SSEEEEEEESS-SCCC
T ss_pred cCCcccccccHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcC-----------------------CeEEEEEEecC-CCcc
Confidence 99999999999999999999999999999999999998754 33444432110 1234
Q ss_pred eEEeccEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHH
Q 009310 358 QIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQ 437 (538)
Q Consensus 358 ~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~q 437 (538)
+++++|.||+|+|++|+++++... ..+++++++|+|.||+++|+ +.|+|||+|||+.. ++.+..|.+|
T Consensus 264 ~~~~~D~vv~a~G~~p~~~~l~~~---~~gl~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~--------~~~~~~A~~~ 331 (470)
T 1dxl_A 264 TIIEADVVLVSAGRTPFTSGLNLD---KIGVETDKLGRILVNERFST-NVSGVYAIGDVIPG--------PMLAHKAEED 331 (470)
T ss_dssp EEEEESEEECCCCEEECCTTSCCT---TTTCCBCSSSCBCCCTTCBC-SSTTEEECSTTSSS--------CCCHHHHHHH
T ss_pred eEEECCEEEECCCCCcCCCCCCch---hcCCccCCCCCEeECcCCcc-CCCCEEEEeccCCC--------CccHHHHHHH
Confidence 789999999999999998874211 23678888899999999998 99999999999985 6789999999
Q ss_pred HHHHHHHHHH
Q 009310 438 ADFAGWNLWA 447 (538)
Q Consensus 438 g~~aa~~i~~ 447 (538)
|+.+|.||.+
T Consensus 332 g~~aa~~i~g 341 (470)
T 1dxl_A 332 GVACVEYLAG 341 (470)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHcC
Confidence 9999999985
No 32
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=7.8e-37 Score=323.78 Aligned_cols=295 Identities=19% Similarity=0.221 Sum_probs=223.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC-------c---chh------h----hh-cCC----
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-------P---MLY------E----LL-SGE---- 133 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~-------p---~~~------~----~~-~g~---- 133 (538)
++||+|||||+||++||..|++ .|++|+|||+++.+... | ++. . .. .|.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~------~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~ 75 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQ------LGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGE 75 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGG
T ss_pred CCCEEEECCCHHHHHHHHHHHH------CCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCC
Confidence 4799999999999999999999 67899999998754322 1 100 0 00 010
Q ss_pred ---CCCcccc-----------ccHHHHhccCCcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcCCc--eEEEeeEEEE
Q 009310 134 ---VDAWEIA-----------PRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG--LIVEYDWLVL 197 (538)
Q Consensus 134 ---~~~~~~~-----------~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g--~~~~yD~lVl 197 (538)
.+...+. ..+..++++.+++++.+.+..++.... .+.+.+| ..+.||+||+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~-------------~v~~~~G~~~~~~~d~lvi 142 (468)
T 2qae_A 76 GVTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSI-------------RVNGLDGKQEMLETKKTII 142 (468)
T ss_dssp GCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEETTEE-------------EEEETTSCEEEEEEEEEEE
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEE-------------EEEecCCceEEEEcCEEEE
Confidence 0111110 112344556689999987776764322 4655666 6899999999
Q ss_pred eCCCCCCCCCCCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEe
Q 009310 198 SLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAIN 277 (538)
Q Consensus 198 AtG~~~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~ 277 (538)
|||+.|..|+++|.+.. .+.+.+++..+.. .+++++|||+|++|+|+|..+.+.+.+ |++++
T Consensus 143 AtG~~p~~p~~~g~~~~--~v~t~~~~~~~~~-------------~~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~ 204 (468)
T 2qae_A 143 ATGSEPTELPFLPFDEK--VVLSSTGALALPR-------------VPKTMVVIGGGVIGLELGSVWARLGAE---VTVVE 204 (468)
T ss_dssp CCCEEECCBTTBCCCSS--SEECHHHHHTCSS-------------CCSEEEEECCSHHHHHHHHHHHHTTCE---EEEEC
T ss_pred CCCCCcCCCCCCCCCcC--ceechHHHhhccc-------------CCceEEEECCCHHHHHHHHHHHHhCCE---EEEEe
Confidence 99999999988886431 2345555544321 268999999999999999999887765 99999
Q ss_pred cCCccCCCCChhhHHHHHHHH-HhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCc
Q 009310 278 VETTICPTGTPGNREAALKVL-SARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLE 356 (538)
Q Consensus 278 ~~~~~l~~~~~~~~~~~~~~l-~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 356 (538)
+.+++++.+++++.+.+.+.| ++.||++++++.|++++.++ +++.+.+.. .+++
T Consensus 205 ~~~~~l~~~d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~-----------------------~~~~v~~~~--~~g~ 259 (468)
T 2qae_A 205 FAPRCAPTLDEDVTNALVGALAKNEKMKFMTSTKVVGGTNNG-----------------------DSVSLEVEG--KNGK 259 (468)
T ss_dssp SSSSSSTTSCHHHHHHHHHHHHHHTCCEEECSCEEEEEEECS-----------------------SSEEEEEEC--C---
T ss_pred cCCcccccCCHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcC-----------------------CeEEEEEEc--CCCc
Confidence 999999999999999999999 99999999999999998754 334444321 0112
Q ss_pred ceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEcccccc-ccCCCCCCCCccHHHHH
Q 009310 357 SQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSA-LRDSSGRPLPATAQVAF 435 (538)
Q Consensus 357 g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~-~~~~~~~~~~~~~~~A~ 435 (538)
++++++|.||+|+|.+|+++++.. ...+++++++|+|.||+++|+ +.|+|||+|||+. . ++.+..|.
T Consensus 260 ~~~i~~D~vv~a~G~~p~~~~l~l---~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~~--------~~~~~~A~ 327 (468)
T 2qae_A 260 RETVTCEALLVSVGRRPFTGGLGL---DKINVAKNERGFVKIGDHFET-SIPDVYAIGDVVDKG--------PMLAHKAE 327 (468)
T ss_dssp EEEEEESEEEECSCEEECCTTSCH---HHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGBSSS--------CSCHHHHH
T ss_pred eEEEECCEEEECCCcccCCCCCCc---hhcCCccCCCCCEeECCCccc-CCCCEEEeeccCCCC--------CccHhHHH
Confidence 368999999999999999887421 133677888899999999998 9999999999998 4 67899999
Q ss_pred HHHHHHHHHHHH
Q 009310 436 QQADFAGWNLWA 447 (538)
Q Consensus 436 ~qg~~aa~~i~~ 447 (538)
+||+.+|.||.+
T Consensus 328 ~~g~~aa~~i~~ 339 (468)
T 2qae_A 328 DEGVACAEILAG 339 (468)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHcC
Confidence 999999999985
No 33
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=5.6e-37 Score=304.48 Aligned_cols=287 Identities=18% Similarity=0.156 Sum_probs=217.6
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCc-chhhhhc-CCCCCccccccHHHHhccC-CcEEE
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP-MLYELLS-GEVDAWEIAPRFADLLANT-GVQFF 155 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p-~~~~~~~-g~~~~~~~~~~~~~~~~~~-~v~~~ 155 (538)
++||+|||||+||+++|..|++ .|++|+|||+++.....+ ....+.. ......++...+.+.+.+. +++++
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~------~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 75 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGR------ARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWV 75 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH------TTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHh------CCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEE
Confidence 4799999999999999999999 678999999976433222 1111121 1233445556666777666 78998
Q ss_pred EeeEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCCCCCCccccCc-CCCChHHHHHHHHHHHHH
Q 009310 156 KDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAF-PFSTLEDACRVDRKLSEL 234 (538)
Q Consensus 156 ~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p~ipG~~~~~~-~~~~~~d~~~~~~~l~~~ 234 (538)
.++|+.++.+... +.+.++++..+.||+||+|||+.|+.|.+||..++.. ...... .. +..
T Consensus 76 ~~~v~~i~~~~~~-----------~~v~~~~g~~~~~d~vviAtG~~~~~~~~~g~~~~~~~~~~~~~-~~---~~~--- 137 (297)
T 3fbs_A 76 EGRVTDAKGSFGE-----------FIVEIDGGRRETAGRLILAMGVTDELPEIAGLRERWGSAVFHCP-YC---HGY--- 137 (297)
T ss_dssp ESCEEEEEEETTE-----------EEEEETTSCEEEEEEEEECCCCEEECCCCBTTGGGBTTTEESCH-HH---HTG---
T ss_pred EeEEEEEEEcCCe-----------EEEEECCCCEEEcCEEEECCCCCCCCCCCCCchhhcCCeeEEcc-cC---cch---
Confidence 8999999765431 2677888888999999999999999999999765311 111111 00 000
Q ss_pred HHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEEcCceeeEE
Q 009310 235 ERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCI 314 (538)
Q Consensus 235 ~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i 314 (538)
. ..+++|+|||+|++|+|+|..|.+.+ + |+++++.+. .+.+.+.+.|++.||+++. +.|+++
T Consensus 138 -~-----~~~~~v~vvG~G~~~~e~a~~l~~~g-~---v~~v~~~~~-------~~~~~~~~~l~~~gv~i~~-~~v~~i 199 (297)
T 3fbs_A 138 -E-----LDQGKIGVIAASPMAIHHALMLPDWG-E---TTFFTNGIV-------EPDADQHALLAARGVRVET-TRIREI 199 (297)
T ss_dssp -G-----GTTCEEEEECCSTTHHHHHHHGGGTS-E---EEEECTTTC-------CCCHHHHHHHHHTTCEEEC-SCEEEE
T ss_pred -h-----hcCCEEEEEecCccHHHHHHHhhhcC-c---EEEEECCCC-------CCCHHHHHHHHHCCcEEEc-ceeeee
Confidence 0 01679999999999999999998764 3 999988764 3345567889999999996 889998
Q ss_pred eccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcC--C
Q 009310 315 RRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLN--A 392 (538)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~--~ 392 (538)
..+ +.+++. +++++++|.||+|+|++|+.+++... +++++ +
T Consensus 200 ~~~------------------------~~v~~~--------~g~~~~~D~vi~a~G~~p~~~~~~~~-----g~~~~~~~ 242 (297)
T 3fbs_A 200 AGH------------------------ADVVLA--------DGRSIALAGLFTQPKLRITVDWIEKL-----GCAVEEGP 242 (297)
T ss_dssp ETT------------------------EEEEET--------TSCEEEESEEEECCEEECCCSCHHHH-----TCCEEEET
T ss_pred ecC------------------------CeEEeC--------CCCEEEEEEEEEccCcccCchhHHhc-----CCccccCC
Confidence 762 234443 67889999999999999998876543 45555 4
Q ss_pred CC-CeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHCCCC
Q 009310 393 RG-QAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRP 453 (538)
Q Consensus 393 ~G-~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~~~~ 453 (538)
.| ++.||+++++ +.|+|||+|||+.. |+.+..|+.||+.+|.||.+.+.+.+
T Consensus 243 ~G~~i~vd~~~~t-~~~~vya~GD~~~~--------~~~~~~A~~~g~~aa~~i~~~l~~~~ 295 (297)
T 3fbs_A 243 MGSTIVTDPMKQT-TARGIFACGDVARP--------AGSVALAVGDGAMAGAAAHRSILFPE 295 (297)
T ss_dssp TEEEECCCTTCBC-SSTTEEECSGGGCT--------TCCHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred CCceEEeCCCCcc-CCCCEEEEeecCCc--------hHHHHHHHHhHHHHHHHHHHHHhhhh
Confidence 57 8999999998 99999999999986 78999999999999999999988764
No 34
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=7.6e-37 Score=326.30 Aligned_cols=294 Identities=21% Similarity=0.237 Sum_probs=224.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC-------c---chhh-----hh-----cCC-----
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-------P---MLYE-----LL-----SGE----- 133 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~-------p---~~~~-----~~-----~g~----- 133 (538)
.+||||||||+||++||..|++.. +.|++|+|||+++ ++.. | ++.. .+ .|.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~---~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~ 77 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSH---PETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFD 77 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHC---TTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC----
T ss_pred CCCEEEECCCHHHHHHHHHHHhCC---CCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccC
Confidence 479999999999999999999841 0188999999986 3211 1 1000 00 010
Q ss_pred ---CCCccc-----------cccHHHHhccCCcEEEEeeEEEEcCC-----CCcCcCCCceeecccEEEcCCce--EEEe
Q 009310 134 ---VDAWEI-----------APRFADLLANTGVQFFKDRVKLLCPS-----DHLGVNGPMACTHGGTVLLESGL--IVEY 192 (538)
Q Consensus 134 ---~~~~~~-----------~~~~~~~~~~~~v~~~~~~v~~i~~~-----~~~~~~~~~~~~~~~~v~~~~g~--~~~y 192 (538)
.+...+ ...+.+++++.+++++.+.+..++.. .. ..+..+++. .+.|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~------------~~V~~~~g~~~~~~~ 145 (499)
T 1xdi_A 78 DAKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHR------------IKATAADGSTSEHEA 145 (499)
T ss_dssp --CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEE------------EEEECTTSCEEEEEE
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCE------------EEEEeCCCcEEEEEe
Confidence 011111 11134556677999999988887762 11 145556665 7999
Q ss_pred eEEEEeCCCCCCCCCCCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCc
Q 009310 193 DWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGI 272 (538)
Q Consensus 193 D~lVlAtG~~~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~ 272 (538)
|+||+|||+.|..|++||.+.. .+.+.+++..+.. .+++++|||+|.+|+|+|..+.+.+.+
T Consensus 146 d~lviATGs~p~~p~i~g~~~~--~v~~~~~~~~~~~-------------~~~~vvViGgG~ig~E~A~~l~~~g~~--- 207 (499)
T 1xdi_A 146 DVVLVATGASPRILPSAQPDGE--RILTWRQLYDLDA-------------LPDHLIVVGSGVTGAEFVDAYTELGVP--- 207 (499)
T ss_dssp SEEEECCCEEECCCGGGCCCSS--SEEEGGGGGGCSS-------------CCSSEEEESCSHHHHHHHHHHHHTTCC---
T ss_pred CEEEEcCCCCCCCCCCCCCCcC--cEEehhHhhhhhc-------------cCCeEEEECCCHHHHHHHHHHHHcCCe---
Confidence 9999999999999989887432 1223333332211 268999999999999999999887665
Q ss_pred EEEEecCCccCCCCChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccc
Q 009310 273 VQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAI 352 (538)
Q Consensus 273 Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 352 (538)
|+++++.+.+++.+++.+.+.+.+.+++.||++++++.|++++.++ +++.+.+.
T Consensus 208 Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~-----------------------~~v~v~~~--- 261 (499)
T 1xdi_A 208 VTVVASQDHVLPYEDADAALVLEESFAERGVRLFKNARAASVTRTG-----------------------AGVLVTMT--- 261 (499)
T ss_dssp EEEECSSSSSSCCSSHHHHHHHHHHHHHTTCEEETTCCEEEEEECS-----------------------SSEEEEET---
T ss_pred EEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC-----------------------CEEEEEEC---
Confidence 9999999999999999999999999999999999999999998754 34555532
Q ss_pred cCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHH
Q 009310 353 KGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQ 432 (538)
Q Consensus 353 ~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~ 432 (538)
+++++++|.||+|+|.+|+++++... ..+++++++|+|.||+++|+ +.|+|||+|||+.. +..+.
T Consensus 262 ---~g~~i~aD~Vv~a~G~~p~~~~l~l~---~~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~~--------~~l~~ 326 (499)
T 1xdi_A 262 ---DGRTVEGSHALMTIGSVPNTSGLGLE---RVGIQLGRGNYLTVDRVSRT-LATGIYAAGDCTGL--------LPLAS 326 (499)
T ss_dssp ---TSCEEEESEEEECCCEEECCSSSCTT---TTTCCCBTTTBCCCCSSSBC-SSTTEEECSGGGTS--------CSCHH
T ss_pred ---CCcEEEcCEEEECCCCCcCCCcCCch---hcCceECCCCCEEECCCccc-CCCCEEEEeccCCC--------cccHH
Confidence 67789999999999999998874211 23688888999999999998 89999999999985 67889
Q ss_pred HHHHHHHHHHHHHHH
Q 009310 433 VAFQQADFAGWNLWA 447 (538)
Q Consensus 433 ~A~~qg~~aa~~i~~ 447 (538)
.|.+||+.+|.||.+
T Consensus 327 ~A~~~g~~aa~~i~g 341 (499)
T 1xdi_A 327 VAAMQGRIAMYHALG 341 (499)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999999974
No 35
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=1.1e-36 Score=320.68 Aligned_cols=286 Identities=21% Similarity=0.309 Sum_probs=218.9
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC-------c---ch-----hhhhc------CC----
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-------P---ML-----YELLS------GE---- 133 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~-------p---~~-----~~~~~------g~---- 133 (538)
++||+|||||+||+++|.+|++ .|++|+|||++. ++.. | ++ ...+. +.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~------~g~~V~liE~~~-~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~ 76 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAM------YGQKCALIEAKE-LGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTI 76 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT------TTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHh------CCCeEEEEcCCC-CCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCC
Confidence 4799999999999999999998 688999999984 2211 0 00 00000 00
Q ss_pred --CCCcc-----------ccccHHHHhccCCcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCC
Q 009310 134 --VDAWE-----------IAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLG 200 (538)
Q Consensus 134 --~~~~~-----------~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG 200 (538)
.+... +...+...+...+++++.+++..++.. ++.+ ++..+.||+||+|||
T Consensus 77 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~---------------~v~~-~g~~~~~d~lviAtG 140 (450)
T 1ges_A 77 NKFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAK---------------TLEV-NGETITADHILIATG 140 (450)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEETT---------------EEEE-TTEEEEEEEEEECCC
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCC---------------EEEE-CCEEEEeCEEEECCC
Confidence 00000 011122334567899999887777532 3555 567899999999999
Q ss_pred CCCCCCCCCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCC
Q 009310 201 AEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVET 280 (538)
Q Consensus 201 ~~~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~ 280 (538)
+.|..|++||.+ + +.+.++...+.. .+++|+|||+|++|+|+|..+++.+.+ |+++++.+
T Consensus 141 s~p~~p~i~g~~-~---~~~~~~~~~~~~-------------~~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~ 200 (450)
T 1ges_A 141 GRPSHPDIPGVE-Y---GIDSDGFFALPA-------------LPERVAVVGAGYIGVELGGVINGLGAK---THLFEMFD 200 (450)
T ss_dssp EEECCCCSTTGG-G---SBCHHHHHHCSS-------------CCSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSS
T ss_pred CCCCCCCCCCcc-c---eecHHHhhhhhh-------------cCCeEEEECCCHHHHHHHHHHHhcCCE---EEEEEeCC
Confidence 999999999973 2 234555443321 268999999999999999999887665 99999999
Q ss_pred ccCCCCChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEE
Q 009310 281 TICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIF 360 (538)
Q Consensus 281 ~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l 360 (538)
.+++.+++.+.+.+.+.+++.||++++++.|++++.+++ +.+.+.+. +|+++
T Consensus 201 ~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~----------------------~~~~v~~~------~g~~i 252 (450)
T 1ges_A 201 APLPSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTD----------------------GSLTLELE------DGRSE 252 (450)
T ss_dssp SSSTTSCHHHHHHHHHHHHHHSCEEECSCCEEEEEECTT----------------------SCEEEEET------TSCEE
T ss_pred chhhhhhHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC----------------------cEEEEEEC------CCcEE
Confidence 999999999999999999999999999999999987431 22444432 56789
Q ss_pred eccEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHH
Q 009310 361 EADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADF 440 (538)
Q Consensus 361 ~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~ 440 (538)
++|.||+|+|.+|+++++.. ...+++++++|+|.||+++|+ +.|+|||+|||+.. +..+..|.+||+.
T Consensus 253 ~~D~vv~a~G~~p~~~~l~~---~~~gl~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~--------~~~~~~A~~~g~~ 320 (450)
T 1ges_A 253 TVDCLIWAIGREPANDNINL---EAAGVKTNEKGYIVVDKYQNT-NIEGIYAVGDNTGA--------VELTPVAVAAGRR 320 (450)
T ss_dssp EESEEEECSCEEESCTTSCH---HHHTCCBCTTSCBCCCTTSBC-SSTTEEECSGGGTS--------CCCHHHHHHHHHH
T ss_pred EcCEEEECCCCCcCCCCCCc---hhcCceECCCCCEeECCCCcc-CCCCEEEEeccCCC--------CccHHHHHHHHHH
Confidence 99999999999999875421 133678888999999999998 99999999999875 6789999999999
Q ss_pred HHHHHHH
Q 009310 441 AGWNLWA 447 (538)
Q Consensus 441 aa~~i~~ 447 (538)
+|.||..
T Consensus 321 aa~~i~~ 327 (450)
T 1ges_A 321 LSERLFN 327 (450)
T ss_dssp HHHHHHT
T ss_pred HHHHHcC
Confidence 9999985
No 36
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=3.4e-36 Score=319.78 Aligned_cols=318 Identities=18% Similarity=0.217 Sum_probs=226.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcc----------hh------hhh-----cCC----
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM----------LY------ELL-----SGE---- 133 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~----------~~------~~~-----~g~---- 133 (538)
.+||+|||||+||+++|..|++ .|++|+|||+++.+..... +. ... .|.
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~------~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~ 78 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQ------LGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNG 78 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECS
T ss_pred cCCEEEECCCHHHHHHHHHHHH------CCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCC
Confidence 4799999999999999999999 6789999999765432110 00 000 000
Q ss_pred ---CCCcccc-----------ccHHHHhccCCcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcCCc--eE------EE
Q 009310 134 ---VDAWEIA-----------PRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG--LI------VE 191 (538)
Q Consensus 134 ---~~~~~~~-----------~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g--~~------~~ 191 (538)
.+...+. ..+...+++.+++++.+.....+... ..+.+.+| .. +.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~-------------v~V~~~~G~~~~~~~~~~i~ 145 (478)
T 1v59_A 79 DIKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFEDETK-------------IRVTPVDGLEGTVKEDHILD 145 (478)
T ss_dssp CEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEESSSSE-------------EEEECCTTCTTCCSSCEEEE
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCe-------------EEEEecCCCcccccccceEE
Confidence 0000000 01233455678999887655432221 14555555 46 99
Q ss_pred eeEEEEeCCCCCCCCCCCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcC
Q 009310 192 YDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKG 271 (538)
Q Consensus 192 yD~lVlAtG~~~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~ 271 (538)
||+||+|||+.|. .+||.......+.+.+++..+.. .+++|+|||+|++|+|+|..+++.+.+
T Consensus 146 ~d~lViAtGs~p~--~~~g~~~~~~~v~~~~~~~~~~~-------------~~~~vvViGgG~~g~e~A~~l~~~g~~-- 208 (478)
T 1v59_A 146 VKNIIVATGSEVT--PFPGIEIDEEKIVSSTGALSLKE-------------IPKRLTIIGGGIIGLEMGSVYSRLGSK-- 208 (478)
T ss_dssp EEEEEECCCEEEC--CCTTCCCCSSSEECHHHHTTCSS-------------CCSEEEEECCSHHHHHHHHHHHHTTCE--
T ss_pred eCEEEECcCCCCC--CCCCCCCCCceEEcHHHHHhhhc-------------cCceEEEECCCHHHHHHHHHHHHcCCE--
Confidence 9999999999873 45665322223455555544322 168999999999999999999987765
Q ss_pred cEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEEcCceeeEEec--cccccccccCCCCCcccccccccCCCceEEeec
Q 009310 272 IVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRR--VGEFEASVKQPESGAIPNIAADKNSDKYILELQ 349 (538)
Q Consensus 272 ~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 349 (538)
|+++++.+++++.+++++.+.+.+.|++.||++++++.|++++. ++ +.+.+.+.
T Consensus 209 -Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-----------------------~~~~v~~~ 264 (478)
T 1v59_A 209 -VTVVEFQPQIGASMDGEVAKATQKFLKKQGLDFKLSTKVISAKRNDDK-----------------------NVVEIVVE 264 (478)
T ss_dssp -EEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTT-----------------------TEEEEEEE
T ss_pred -EEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCC-----------------------CeEEEEEE
Confidence 99999999999999999999999999999999999999999986 33 33344332
Q ss_pred ccccCCcceEEeccEEEEecCCCCCCC--CCCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCCCC
Q 009310 350 PAIKGLESQIFEADLVLWTVGSKPLLP--HVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPL 427 (538)
Q Consensus 350 ~~~~~~~g~~l~~D~vI~a~G~~p~~~--~l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~ 427 (538)
+. ..++++++++|.||+|+|.+|+++ +++. .+++++++|+|.||+++|+ +.|+|||+|||+..
T Consensus 265 ~~-~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~-----~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~-------- 329 (478)
T 1v59_A 265 DT-KTNKQENLEAEVLLVAVGRRPYIAGLGAEK-----IGLEVDKRGRLVIDDQFNS-KFPHIKVVGDVTFG-------- 329 (478)
T ss_dssp ET-TTTEEEEEEESEEEECSCEEECCTTSCTTT-----TTCCBCTTSCBCCCTTSBC-SSTTEEECGGGSSS--------
T ss_pred Ec-CCCCceEEECCEEEECCCCCcCCCCCCchh-----cCceeCCCCCEeECcCCcc-CCCCEEEeeccCCC--------
Confidence 11 122567899999999999999987 5543 3578888999999999998 89999999999986
Q ss_pred CccHHHHHHHHHHHHHHHHHHHCC--CCCCCceecCcccEEEecCC
Q 009310 428 PATAQVAFQQADFAGWNLWAAIND--RPLLPFRFQNLGEMMILGRN 471 (538)
Q Consensus 428 ~~~~~~A~~qg~~aa~~i~~~l~~--~~~~p~~~~~~g~~~~lG~~ 471 (538)
++.+..|.+||+.+|.||.+.... ....|+.......+.++|..
T Consensus 330 ~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~a~vG~~ 375 (478)
T 1v59_A 330 PMLAHKAEEEGIAAVEMLKTGHGHVNYNNIPSVMYSHPEVAWVGKT 375 (478)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSCCCCCTTSCCEEECSSSEEEEEECC
T ss_pred cccHHHHHHHHHHHHHHHcCCCCCCCCCCCCEEEEcCCcEEEEECC
Confidence 678899999999999999863211 11223333333456666644
No 37
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=1.3e-36 Score=325.97 Aligned_cols=315 Identities=18% Similarity=0.209 Sum_probs=231.5
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCc----------chhhh--------------hcC
Q 009310 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP----------MLYEL--------------LSG 132 (538)
Q Consensus 77 ~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p----------~~~~~--------------~~g 132 (538)
..++||||||||+||+++|.+|++ .|++|+|||+++.++... ++... ...
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~------~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~ 114 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRA------MGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPD 114 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHH------TTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHH------CCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHH
Confidence 455899999999999999999999 678999999987432211 00000 011
Q ss_pred CCC----CccccccH----H---HHh-----ccCCcEEE-EeeEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEE
Q 009310 133 EVD----AWEIAPRF----A---DLL-----ANTGVQFF-KDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWL 195 (538)
Q Consensus 133 ~~~----~~~~~~~~----~---~~~-----~~~~v~~~-~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~l 195 (538)
... ..++...+ . .++ +..+++++ .++++.++.. ++.++ +..+.||+|
T Consensus 115 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~---------------~v~~~-g~~~~~d~l 178 (523)
T 1mo9_A 115 MTEKVVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDNH---------------TVEAA-GKVFKAKNL 178 (523)
T ss_dssp CTTCCCCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEETT---------------EEEET-TEEEEBSCE
T ss_pred HHhhhhhHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeCC---------------EEEEC-CEEEEeCEE
Confidence 111 11111112 2 445 67789988 7788877642 35554 568999999
Q ss_pred EEeCCCCCCCCCCCCccccCcCCCChHHHH-HHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEE
Q 009310 196 VLSLGAEPKLDVVPGAAEFAFPFSTLEDAC-RVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQ 274 (538)
Q Consensus 196 VlAtG~~~~~p~ipG~~~~~~~~~~~~d~~-~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vt 274 (538)
|+|||+.|..|++||.... .+.+.+++. .+.. .++++++|||+|.+|+|+|..+.+.+.+ |+
T Consensus 179 ViATGs~p~~p~i~G~~~~--~v~~~~~~~~~l~~------------~~g~~vvViGgG~~g~E~A~~l~~~G~~---Vt 241 (523)
T 1mo9_A 179 ILAVGAGPGTLDVPGVNAK--GVFDHATLVEELDY------------EPGSTVVVVGGSKTAVEYGCFFNATGRR---TV 241 (523)
T ss_dssp EECCCEECCCCCSTTTTSB--TEEEHHHHHHHCCS------------CCCSEEEEECCSHHHHHHHHHHHHTTCE---EE
T ss_pred EECCCCCCCCCCCCCcccC--cEeeHHHHHHHHHh------------cCCCeEEEECCCHHHHHHHHHHHHcCCe---EE
Confidence 9999999999999997532 122444433 2111 1138999999999999999999887765 99
Q ss_pred EEecCCccCCCCChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCc---eEEeeccc
Q 009310 275 AINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDK---YILELQPA 351 (538)
Q Consensus 275 lv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---v~~~~~~~ 351 (538)
++++.+.+++.+++++.+.+.+.+++.||++++++.|+++..+++ +. +.+.+.
T Consensus 242 lv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~----------------------~~v~~~~v~~~-- 297 (523)
T 1mo9_A 242 MLVRTEPLKLIKDNETRAYVLDRMKEQGMEIISGSNVTRIEEDAN----------------------GRVQAVVAMTP-- 297 (523)
T ss_dssp EECSSCTTTTCCSHHHHHHHHHHHHHTTCEEESSCEEEEEEECTT----------------------SBEEEEEEEET--
T ss_pred EEEecCcccccccHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCC----------------------CceEEEEEEEC--
Confidence 999999999999999999999999999999999999999986431 21 445432
Q ss_pred ccCCcce-EEeccEEEEecCCCCCCC-CCCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCc
Q 009310 352 IKGLESQ-IFEADLVLWTVGSKPLLP-HVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPA 429 (538)
Q Consensus 352 ~~~~~g~-~l~~D~vI~a~G~~p~~~-~l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~ 429 (538)
+|+ ++++|.||+|+|.+|+++ +++. .+++++++|+|.||+++|+ +.|+|||+|||+.. +.
T Consensus 298 ----~G~~~i~aD~Vv~A~G~~p~~~~~l~~-----~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~~--------~~ 359 (523)
T 1mo9_A 298 ----NGEMRIETDFVFLGLGEQPRSAELAKI-----LGLDLGPKGEVLVNEYLQT-SVPNVYAVGDLIGG--------PM 359 (523)
T ss_dssp ----TEEEEEECSCEEECCCCEECCHHHHHH-----HTCCBCTTSCBCCCTTSBC-SSTTEEECGGGGCS--------SC
T ss_pred ----CCcEEEEcCEEEECcCCccCCccCHHH-----cCCccCCCCCEEECCCCcc-CCCCEEEEeecCCC--------cc
Confidence 566 899999999999999987 5543 3578888999999999999 99999999999985 67
Q ss_pred cHHHHHHHHHHHHHHHHHHHCC--CCCCCceecCcccEEEecCCC
Q 009310 430 TAQVAFQQADFAGWNLWAAIND--RPLLPFRFQNLGEMMILGRND 472 (538)
Q Consensus 430 ~~~~A~~qg~~aa~~i~~~l~~--~~~~p~~~~~~g~~~~lG~~~ 472 (538)
.+..|.+||+.+|.||.+.-.. ....|+.......+.++|...
T Consensus 360 ~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~a~vG~~e 404 (523)
T 1mo9_A 360 EMFKARKSGCYAARNVMGEKISYTPKNYPDFLHTHYEVSFLGMGE 404 (523)
T ss_dssp SHHHHHHHHHHHHHHHTTCCCCCCCCSCCEEEESSSEEEEEECCH
T ss_pred cHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEECCCceEEEeCCH
Confidence 8899999999999999852110 112343333334566677543
No 38
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=2.2e-36 Score=319.93 Aligned_cols=293 Identities=20% Similarity=0.286 Sum_probs=223.1
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhh-------------------c--CCCCCc
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELL-------------------S--GEVDAW 137 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~-------------------~--g~~~~~ 137 (538)
.+||+|||||+||+++|..|++ .|++|+|||+++.++......... . ...+..
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~------~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~ 77 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAK------AKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFS 77 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHH
T ss_pred cceEEEECCCHHHHHHHHHHHh------CCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHH
Confidence 4799999999999999999998 678999999877654321110000 0 001111
Q ss_pred ccc------------ccHHHHhccCCcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcCCceE--EEeeEEEEeCCCCC
Q 009310 138 EIA------------PRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLI--VEYDWLVLSLGAEP 203 (538)
Q Consensus 138 ~~~------------~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~--~~yD~lVlAtG~~~ 203 (538)
.+. ..+..+++..+++++.+++..+++... .+.++++.. +.||+||+|||+.|
T Consensus 78 ~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~v~~id~~~~-------------~V~~~~g~~~~~~~d~lviAtG~~p 144 (466)
T 3l8k_A 78 TVQDRKDYVQELRFKQHKRNMSQYETLTFYKGYVKIKDPTHV-------------IVKTDEGKEIEAETRYMIIASGAET 144 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCTTEEEESEEEEEEETTEE-------------EEEETTSCEEEEEEEEEEECCCEEE
T ss_pred HHHHHHHhheeccccchHHHHHHhCCCEEEEeEEEEecCCeE-------------EEEcCCCcEEEEecCEEEECCCCCc
Confidence 111 233445567799999999998875532 577777777 99999999999999
Q ss_pred CCCCCCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccC
Q 009310 204 KLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTIC 283 (538)
Q Consensus 204 ~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l 283 (538)
+.|++||.+ .+.+.+++..++..+ ...+++|+|||+|++|+|+|..+.+.+.+ |+++++.++++
T Consensus 145 ~~p~i~G~~----~~~t~~~~~~~~~~l---------~~~~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~l 208 (466)
T 3l8k_A 145 AKLRLPGVE----YCLTSDDIFGYKTSF---------RKLPQDMVIIGAGYIGLEIASIFRLMGVQ---THIIEMLDRAL 208 (466)
T ss_dssp CCCCCTTGG----GSBCHHHHHSTTCSC---------CSCCSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSC
T ss_pred cCCCCCCcc----ceEeHHHHHHHHHHH---------hhCCCeEEEECCCHHHHHHHHHHHHcCCE---EEEEEeCCcCC
Confidence 999999975 244555555222111 11268999999999999999999987766 99999999999
Q ss_pred CCC-ChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEec
Q 009310 284 PTG-TPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEA 362 (538)
Q Consensus 284 ~~~-~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~ 362 (538)
+.+ ++++.+.+.+.++ |++++++.|++++.++. +++.+.+.+ .+++.+++++
T Consensus 209 ~~~~d~~~~~~l~~~l~---v~i~~~~~v~~i~~~~~----------------------~~v~v~~~~--~~G~~~~i~~ 261 (466)
T 3l8k_A 209 ITLEDQDIVNTLLSILK---LNIKFNSPVTEVKKIKD----------------------DEYEVIYST--KDGSKKSIFT 261 (466)
T ss_dssp TTSCCHHHHHHHHHHHC---CCEECSCCEEEEEEEET----------------------TEEEEEECC--TTSCCEEEEE
T ss_pred CCCCCHHHHHHHHhcCE---EEEEECCEEEEEEEcCC----------------------CcEEEEEEe--cCCceEEEEc
Confidence 988 9999988888877 99999999999987431 234444321 0112348999
Q ss_pred cEEEEecCCCCCCCC-CCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHH
Q 009310 363 DLVLWTVGSKPLLPH-VEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFA 441 (538)
Q Consensus 363 D~vI~a~G~~p~~~~-l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~a 441 (538)
|.||+|+|++|++++ +. ..+++++++| |.||+++|+ +.|+|||+|||+.. ++.+..|..||+.+
T Consensus 262 D~vi~a~G~~p~~~l~l~-----~~gl~~~~~G-i~vd~~~~t-~~~~Iya~GD~~~~--------~~~~~~A~~~g~~a 326 (466)
T 3l8k_A 262 NSVVLAAGRRPVIPEGAR-----EIGLSISKTG-IVVDETMKT-NIPNVFATGDANGL--------APYYHAAVRMSIAA 326 (466)
T ss_dssp SCEEECCCEEECCCTTTG-----GGTCCBCSSS-BCCCTTCBC-SSTTEEECGGGTCS--------CCSHHHHHHHHHHH
T ss_pred CEEEECcCCCcccccchh-----hcCceeCCCC-EeECCCccC-CCCCEEEEEecCCC--------CccHhHHHHHHHHH
Confidence 999999999999873 22 3468889999 999999999 99999999999986 78999999999999
Q ss_pred HHHHHHH
Q 009310 442 GWNLWAA 448 (538)
Q Consensus 442 a~~i~~~ 448 (538)
|.||.+.
T Consensus 327 a~~i~~~ 333 (466)
T 3l8k_A 327 ANNIMAN 333 (466)
T ss_dssp HHHHHTT
T ss_pred HHHHhCC
Confidence 9999853
No 39
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=4.7e-36 Score=317.03 Aligned_cols=286 Identities=22% Similarity=0.324 Sum_probs=219.1
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC-------c---chh-----hhh-----cCC----
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-------P---MLY-----ELL-----SGE---- 133 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~-------p---~~~-----~~~-----~g~---- 133 (538)
.++||+|||||+||+++|.+|++ .|++|+|||++. ++.. | ++. ..+ .|.
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~------~g~~V~liE~~~-~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~ 75 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAA------FGKRVALIESKA-LGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASG 75 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC-
T ss_pred ccCcEEEECCCHHHHHHHHHHHh------CCCcEEEEcCCC-CCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCC
Confidence 35799999999999999999998 688999999984 2211 1 000 000 011
Q ss_pred --CCCccc-----------cccHHHHhccCCcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCC
Q 009310 134 --VDAWEI-----------APRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLG 200 (538)
Q Consensus 134 --~~~~~~-----------~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG 200 (538)
.+...+ ...+...+...+++++.+++..++.. ++.+ ++..+.||+||+|||
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~---------------~v~~-~g~~~~~d~lviAtG 139 (463)
T 2r9z_A 76 GTLDWPRLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDAH---------------TIEV-EGQRLSADHIVIATG 139 (463)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETT---------------EEEE-TTEEEEEEEEEECCC
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEccCC---------------EEEE-CCEEEEcCEEEECCC
Confidence 010111 11123334567899999887777531 3555 566899999999999
Q ss_pred CCCCCCCCCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCC
Q 009310 201 AEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVET 280 (538)
Q Consensus 201 ~~~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~ 280 (538)
+.|..|++||.+ . +.+.++...+.. .+++|+|||+|.+|+|+|..|.+.+.+ |+++++.+
T Consensus 140 s~p~~p~i~G~~-~---~~~~~~~~~~~~-------------~~~~vvVvGgG~~g~e~A~~l~~~G~~---Vtlv~~~~ 199 (463)
T 2r9z_A 140 GRPIVPRLPGAE-L---GITSDGFFALQQ-------------QPKRVAIIGAGYIGIELAGLLRSFGSE---VTVVALED 199 (463)
T ss_dssp EEECCCSCTTGG-G---SBCHHHHHHCSS-------------CCSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSS
T ss_pred CCCCCCCCCCcc-c---eecHHHHhhhhc-------------cCCEEEEECCCHHHHHHHHHHHhcCCE---EEEEEcCC
Confidence 999999999973 2 234444443221 268999999999999999999887765 99999999
Q ss_pred ccCCCCChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcce-E
Q 009310 281 TICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQ-I 359 (538)
Q Consensus 281 ~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~-~ 359 (538)
.+++.+++.+.+.+.+.+++.||++++++.|++++.++ +++.+.+. +|+ +
T Consensus 200 ~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-----------------------~~~~v~~~------~G~~~ 250 (463)
T 2r9z_A 200 RLLFQFDPLLSATLAENMHAQGIETHLEFAVAALERDA-----------------------QGTTLVAQ------DGTRL 250 (463)
T ss_dssp SSSTTSCHHHHHHHHHHHHHTTCEEESSCCEEEEEEET-----------------------TEEEEEET------TCCEE
T ss_pred ccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC-----------------------CeEEEEEe------CCcEE
Confidence 99999999999999999999999999999999998643 33445433 566 8
Q ss_pred EeccEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHH
Q 009310 360 FEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQAD 439 (538)
Q Consensus 360 l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~ 439 (538)
+++|.||+|+|.+|+++++.. ...+++++++|+|.||+++|+ +.|+|||+|||+.. +..+..|.+||+
T Consensus 251 i~~D~vv~a~G~~p~~~~l~~---~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~--------~~~~~~A~~~g~ 318 (463)
T 2r9z_A 251 EGFDSVIWAVGRAPNTRDLGL---EAAGIEVQSNGMVPTDAYQNT-NVPGVYALGDITGR--------DQLTPVAIAAGR 318 (463)
T ss_dssp EEESEEEECSCEEESCTTSCH---HHHTCCCCTTSCCCCCTTSBC-SSTTEEECGGGGTS--------CCCHHHHHHHHH
T ss_pred EEcCEEEECCCCCcCCCCCCc---hhcCCccCCCCCEeECCCCcc-CCCCEEEEeecCCC--------cccHHHHHHHHH
Confidence 999999999999999875421 123678888999999999998 89999999999874 678999999999
Q ss_pred HHHHHHHH
Q 009310 440 FAGWNLWA 447 (538)
Q Consensus 440 ~aa~~i~~ 447 (538)
.+|.||..
T Consensus 319 ~aa~~i~g 326 (463)
T 2r9z_A 319 RLAERLFD 326 (463)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHcC
Confidence 99999974
No 40
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.1e-36 Score=321.01 Aligned_cols=299 Identities=19% Similarity=0.233 Sum_probs=220.9
Q ss_pred CCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchh---------------hh----hcC-CCC
Q 009310 76 DKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLY---------------EL----LSG-EVD 135 (538)
Q Consensus 76 ~~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~---------------~~----~~g-~~~ 135 (538)
.++++||+||||||||++||..|++ .|++|+|||+++.++...... .. +.. ...
T Consensus 22 ~m~~~dVvVIGgG~aGl~aA~~la~------~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~ 95 (491)
T 3urh_A 22 SMMAYDLIVIGSGPGGYVCAIKAAQ------LGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVE 95 (491)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHH------TTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEE
T ss_pred hcccCCEEEECCCHHHHHHHHHHHH------CCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcc
Confidence 3456899999999999999999999 678999999987654321100 00 000 000
Q ss_pred Ccccc------------------ccHHHHhccCCcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcCCc--eEEEeeEE
Q 009310 136 AWEIA------------------PRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG--LIVEYDWL 195 (538)
Q Consensus 136 ~~~~~------------------~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g--~~~~yD~l 195 (538)
..... ..+...++..+++++.+....+++... .+...+| ..+.||+|
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~-------------~v~~~~g~~~~~~~d~l 162 (491)
T 3urh_A 96 VANPKLNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKV-------------SVTNEKGEEQVLEAKNV 162 (491)
T ss_dssp CCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECSSSEE-------------EEECTTSCEEEEECSEE
T ss_pred cCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEE-------------EEEeCCCceEEEEeCEE
Confidence 00000 112334556789999988777654322 4666665 57999999
Q ss_pred EEeCCCCCCCCCCCCccc--cCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcE
Q 009310 196 VLSLGAEPKLDVVPGAAE--FAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIV 273 (538)
Q Consensus 196 VlAtG~~~~~p~ipG~~~--~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~V 273 (538)
|||||+.| +.+||..+ ....+.+.++...+. ..+++|+|||+|++|+|+|..+.+.+.+ |
T Consensus 163 ViATGs~p--~~ipg~~~~~~~~~~~~~~~~~~~~-------------~~~~~vvViGgG~~g~E~A~~l~~~g~~---V 224 (491)
T 3urh_A 163 VIATGSDV--AGIPGVEVAFDEKTIVSSTGALALE-------------KVPASMIVVGGGVIGLELGSVWARLGAK---V 224 (491)
T ss_dssp EECCCEEC--CCBTTBCCCCCSSSEECHHHHTSCS-------------SCCSEEEEECCSHHHHHHHHHHHHHTCE---E
T ss_pred EEccCCCC--CCCCCcccccCCeeEEehhHhhhhh-------------hcCCeEEEECCCHHHHHHHHHHHHcCCE---E
Confidence 99999986 45777642 112233444333221 1268999999999999999999988776 9
Q ss_pred EEEecCCccCCCCChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeeccccc
Q 009310 274 QAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIK 353 (538)
Q Consensus 274 tlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 353 (538)
+++++.+++++.+++++.+.+.+.+++.||++++++.|.+++.++ +.+.+.+.+..
T Consensus 225 tlv~~~~~~l~~~d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~-----------------------~~~~v~~~~~~- 280 (491)
T 3urh_A 225 TVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSG-----------------------DGAKVTFEPVK- 280 (491)
T ss_dssp EEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEET-----------------------TEEEEEEEETT-
T ss_pred EEEeccccccccCCHHHHHHHHHHHHhCCCEEEECCeEEEEEEeC-----------------------CEEEEEEEecC-
Confidence 999999999999999999999999999999999999999998754 34444433111
Q ss_pred CCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHH
Q 009310 354 GLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQV 433 (538)
Q Consensus 354 ~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~ 433 (538)
+++.+++++|.||+|+|++|+++++.. ...+++++++|+|.||+++|+ +.|+|||+|||+.. |+.+..
T Consensus 281 ~g~~~~i~~D~Vi~a~G~~p~~~~l~l---~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~--------~~~~~~ 348 (491)
T 3urh_A 281 GGEATTLDAEVVLIATGRKPSTDGLGL---AKAGVVLDSRGRVEIDRHFQT-SIAGVYAIGDVVRG--------PMLAHK 348 (491)
T ss_dssp SCCCEEEEESEEEECCCCEECCTTSCH---HHHTCCBCTTSCBCCCTTCBC-SSTTEEECGGGSSS--------CCCHHH
T ss_pred CCceEEEEcCEEEEeeCCccCCCccCc---hhcCceECCCCCEeECCCCCC-CCCCEEEEEecCCC--------ccchhH
Confidence 113478999999999999999876421 134688899999999999998 99999999999975 789999
Q ss_pred HHHHHHHHHHHHHH
Q 009310 434 AFQQADFAGWNLWA 447 (538)
Q Consensus 434 A~~qg~~aa~~i~~ 447 (538)
|..||+.+|.||.+
T Consensus 349 A~~~g~~aa~~i~g 362 (491)
T 3urh_A 349 AEDEGVAVAEIIAG 362 (491)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcC
Confidence 99999999999985
No 41
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=8.6e-37 Score=323.07 Aligned_cols=291 Identities=18% Similarity=0.186 Sum_probs=219.7
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC-------c---chh-----hhh----c--CC-----
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-------P---MLY-----ELL----S--GE----- 133 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~-------p---~~~-----~~~----~--g~----- 133 (538)
+||+|||||+||+++|..|++ .|++|+|||++. +... | ++. ..+ . |.
T Consensus 4 ~dvvIIGaG~aGl~aA~~l~~------~G~~V~liE~~~-~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~ 76 (464)
T 2a8x_A 4 YDVVVLGAGPGGYVAAIRAAQ------LGLSTAIVEPKY-WGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVT 76 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCE
T ss_pred CCEEEECCCHHHHHHHHHHHh------CCCeEEEEeCCC-CCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCc
Confidence 799999999999999999999 678999999983 2211 1 000 000 0 00
Q ss_pred CCCccc-----------cccHHHHhccCCcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcCCc--eEEEeeEEEEeCC
Q 009310 134 VDAWEI-----------APRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG--LIVEYDWLVLSLG 200 (538)
Q Consensus 134 ~~~~~~-----------~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g--~~~~yD~lVlAtG 200 (538)
.+...+ ...+.+.+++.+++++.+....++... ..+.+.+| ..+.||+||+|||
T Consensus 77 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~id~~~-------------v~V~~~~G~~~~~~~d~lViAtG 143 (464)
T 2a8x_A 77 FDYGIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTFADANT-------------LLVDLNDGGTESVTFDNAIIATG 143 (464)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEESSSSE-------------EEEEETTSCCEEEEEEEEEECCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCe-------------EEEEeCCCceEEEEcCEEEECCC
Confidence 000000 011234455678999887665443221 14555666 6899999999999
Q ss_pred CCCCCCCCCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCC
Q 009310 201 AEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVET 280 (538)
Q Consensus 201 ~~~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~ 280 (538)
+.|..|+++|.... +.+.+++..+.. .+++|+|||+|.+|+|+|..+.+.+.+ |+++++.+
T Consensus 144 ~~~~~~~~~g~~~~---~~~~~~~~~~~~-------------~~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~ 204 (464)
T 2a8x_A 144 SSTRLVPGTSLSAN---VVTYEEQILSRE-------------LPKSIIIAGAGAIGMEFGYVLKNYGVD---VTIVEFLP 204 (464)
T ss_dssp EEECCCTTCCCBTT---EECHHHHHTCSS-------------CCSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSS
T ss_pred CCCCCCCCCCCCce---EEecHHHhhccc-------------cCCeEEEECCcHHHHHHHHHHHHcCCe---EEEEEcCC
Confidence 99999988886542 345555443321 268999999999999999999887765 99999999
Q ss_pred ccCCCCChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEE
Q 009310 281 TICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIF 360 (538)
Q Consensus 281 ~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l 360 (538)
++++.+++++.+.+.+.|+++||++++++.|++++.++ +.+.+.+. .+++++++
T Consensus 205 ~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-----------------------~~~~v~~~---~~g~~~~~ 258 (464)
T 2a8x_A 205 RALPNEDADVSKEIEKQFKKLGVTILTATKVESIADGG-----------------------SQVTVTVT---KDGVAQEL 258 (464)
T ss_dssp SSSTTSCHHHHHHHHHHHHHHTCEEECSCEEEEEEECS-----------------------SCEEEEEE---SSSCEEEE
T ss_pred ccccccCHHHHHHHHHHHHHcCCEEEeCcEEEEEEEcC-----------------------CeEEEEEE---cCCceEEE
Confidence 99999999999999999999999999999999998754 33545432 11233789
Q ss_pred eccEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHH
Q 009310 361 EADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADF 440 (538)
Q Consensus 361 ~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~ 440 (538)
++|.||+|+|++||++++.. ...+++++++|+|.||+++|+ +.|+|||+|||+.. ++.+..|.+||+.
T Consensus 259 ~~D~vv~a~G~~p~~~~l~~---~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~--------~~~~~~A~~~g~~ 326 (464)
T 2a8x_A 259 KAEKVLQAIGFAPNVEGYGL---DKAGVALTDRKAIGVDDYMRT-NVGHIYAIGDVNGL--------LQLAHVAEAQGVV 326 (464)
T ss_dssp EESEEEECSCEEECCSSSCH---HHHTCCBCTTSSBCCCTTSBC-SSTTEEECGGGGCS--------SCSHHHHHHHHHH
T ss_pred EcCEEEECCCCCccCCCCCc---hhcCCccCCCCCEeECcCCcc-CCCCEEEeECcCCC--------ccCHHHHHHHHHH
Confidence 99999999999999887421 133677888899999999998 99999999999985 6789999999999
Q ss_pred HHHHHHH
Q 009310 441 AGWNLWA 447 (538)
Q Consensus 441 aa~~i~~ 447 (538)
+|.||.+
T Consensus 327 aa~~i~g 333 (464)
T 2a8x_A 327 AAETIAG 333 (464)
T ss_dssp HHHHHHT
T ss_pred HHHHhcC
Confidence 9999984
No 42
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=4e-36 Score=319.95 Aligned_cols=288 Identities=19% Similarity=0.262 Sum_probs=217.3
Q ss_pred CCeEEEECCcHHHHHHHHHhhh-cccCCCCCCEEEEEc--------CCCCcccC-------c---chh-----h----hh
Q 009310 79 KPRICILGGGFGGLYTALRLES-LVWQDDKKPQVLLVD--------QSERFVFK-------P---MLY-----E----LL 130 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~-~~~~~~~g~~V~lie--------~~~~~~~~-------p---~~~-----~----~~ 130 (538)
++||+|||||+||++||..|++ . |++|+||| +++.++.. | ++. . ..
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~------G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~ 80 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLY------GKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESA 80 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHH------CCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCEEEECCChhHHHHHHHHHHhc------CCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHH
Confidence 4799999999999999999988 4 56999999 23332221 1 000 0 00
Q ss_pred -cCC--------CCCcccc-----------ccHHHHhccC-CcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcC---C
Q 009310 131 -SGE--------VDAWEIA-----------PRFADLLANT-GVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLE---S 186 (538)
Q Consensus 131 -~g~--------~~~~~~~-----------~~~~~~~~~~-~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~---~ 186 (538)
.|. .+...+. ..+...+++. +++++.++++.++.. ++.++ +
T Consensus 81 ~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~---------------~v~v~~~~~ 145 (495)
T 2wpf_A 81 GFGWEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKN---------------VVVVRETAD 145 (495)
T ss_dssp TTTEECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESEEEEEETT---------------EEEEESSSS
T ss_pred hcCcccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeEEEEeeCC---------------EEEEeecCC
Confidence 010 0111111 1122334566 899999988877532 34443 4
Q ss_pred -----ceEEEeeEEEEeCCCCCCCCCCCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHH
Q 009310 187 -----GLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAA 261 (538)
Q Consensus 187 -----g~~~~yD~lVlAtG~~~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~ 261 (538)
+..+.||+||||||+.|+.|++||.+ + +.+.+++..+. ..+++++|||+|.+|+|+|.
T Consensus 146 ~~~~~~~~~~~d~lViATGs~p~~p~i~G~~-~---~~~~~~~~~~~-------------~~~~~vvViGgG~ig~E~A~ 208 (495)
T 2wpf_A 146 PKSAVKERLQADHILLATGSWPQMPAIPGIE-H---CISSNEAFYLP-------------EPPRRVLTVGGGFISVEFAG 208 (495)
T ss_dssp TTSCEEEEEEEEEEEECCCEEECCCCCTTGG-G---CEEHHHHTTCS-------------SCCSEEEEECSSHHHHHHHH
T ss_pred ccCCCCeEEEcCEEEEeCCCCcCCCCCCCcc-c---cccHHHHHhhh-------------hcCCeEEEECCCHHHHHHHH
Confidence 67899999999999999999999973 2 22344433221 12689999999999999999
Q ss_pred HHHHH---HHhcCcEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccc
Q 009310 262 TVSER---LEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAAD 338 (538)
Q Consensus 262 ~l~~~---~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~ 338 (538)
.+.++ +.+ |+++++.+++++.+++++.+.+.+.|+++||++++++.|++++.+++
T Consensus 209 ~l~~~~~~g~~---Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~------------------- 266 (495)
T 2wpf_A 209 IFNAYKPPGGK---VTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSLNTD------------------- 266 (495)
T ss_dssp HHHHHCCTTCE---EEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEEECTT-------------------
T ss_pred HHHhhCCCCCe---EEEEEcCCccccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC-------------------
Confidence 99988 665 99999999999999999999999999999999999999999987431
Q ss_pred cCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEcccccc
Q 009310 339 KNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSA 418 (538)
Q Consensus 339 ~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~ 418 (538)
+.+.+.+. +|+++++|.||+|+|++|+++++.. ...+++++++|+|.||+++|+ +.|+|||+|||+.
T Consensus 267 ---~~~~v~~~------~G~~i~~D~vv~a~G~~p~~~~L~l---~~~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~ 333 (495)
T 2wpf_A 267 ---GSKHVTFE------SGKTLDVDVVMMAIGRIPRTNDLQL---GNVGVKLTPKGGVQVDEFSRT-NVPNIYAIGDITD 333 (495)
T ss_dssp ---SCEEEEET------TSCEEEESEEEECSCEEECCGGGTG---GGTTCCBCTTSSBCCCTTCBC-SSTTEEECGGGGC
T ss_pred ---ceEEEEEC------CCcEEEcCEEEECCCCcccccccch---hhcCccCCCCCCEEECCCCcc-CCCCEEEEeccCC
Confidence 22444432 5678999999999999999875421 134688888999999999998 9999999999997
Q ss_pred ccCCCCCCCCccHHHHHHHHHHHHHHHHH
Q 009310 419 LRDSSGRPLPATAQVAFQQADFAGWNLWA 447 (538)
Q Consensus 419 ~~~~~~~~~~~~~~~A~~qg~~aa~~i~~ 447 (538)
. ++.+..|.+||+.+|.||..
T Consensus 334 ~--------~~l~~~A~~~g~~aa~~i~g 354 (495)
T 2wpf_A 334 R--------LMLTPVAINEGAALVDTVFG 354 (495)
T ss_dssp S--------CCCHHHHHHHHHHHHHHHHS
T ss_pred C--------ccCHHHHHHHHHHHHHHhcC
Confidence 4 67899999999999999974
No 43
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=2.4e-36 Score=302.77 Aligned_cols=299 Identities=15% Similarity=0.104 Sum_probs=214.8
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCc--ch------hhhh--cCCCCCccccccHHHHh
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP--ML------YELL--SGEVDAWEIAPRFADLL 147 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p--~~------~~~~--~g~~~~~~~~~~~~~~~ 147 (538)
..+||+|||||||||+||.+|++ .|++|+|||++......+ .+ +.+. .......++...+....
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~------~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~ 76 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGR------SSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQS 76 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH------TTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHH------CCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHH
Confidence 35899999999999999999999 678999999975321111 11 1110 01112233444556666
Q ss_pred ccCCcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCCCCCCccccC-cCCCChHHHHH
Q 009310 148 ANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFA-FPFSTLEDACR 226 (538)
Q Consensus 148 ~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p~ipG~~~~~-~~~~~~~d~~~ 226 (538)
...++.+....+......... +.+.++++..+.||+||||||+.|+.|++||.+... ..+........
T Consensus 77 ~~~~~~~~~~~v~~~~~~~~~-----------~~~~~~~~~~~~~~~liiATG~~~~~~~ipG~~~~~~~~~~~~~~~~~ 145 (314)
T 4a5l_A 77 EKYGTTIITETIDHVDFSTQP-----------FKLFTEEGKEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICDG 145 (314)
T ss_dssp HHTTCEEECCCEEEEECSSSS-----------EEEEETTCCEEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHT
T ss_pred hhcCcEEEEeEEEEeecCCCc-----------eEEEECCCeEEEEeEEEEcccccccccCCCccccccccceeeehhhhh
Confidence 777888888777776554431 256677888999999999999999999999975332 11111111111
Q ss_pred HHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEE
Q 009310 227 VDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLV 306 (538)
Q Consensus 227 ~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~ 306 (538)
.... ..+++|+|||+|++|+|+|..+++++.+ |+++++...... ......+.+...+++.+
T Consensus 146 ~~~~-----------~~~~~vvViGgG~ig~e~A~~l~~~G~~---Vt~v~~~~~~~~-----~~~~~~~~~~~~~~~~~ 206 (314)
T 4a5l_A 146 AVPI-----------FRNKVLMVVGGGDAAMEEALHLTKYGSK---VIILHRRDAFRA-----SKTMQERVLNHPKIEVI 206 (314)
T ss_dssp TSGG-----------GTTSEEEEECSSHHHHHHHHHHTTTSSE---EEEECSSSSCCS-----CHHHHHHHHTCTTEEEE
T ss_pred hhhh-----------cCCCeEEEECCChHHHHHHHHHHHhCCe---eeeecccccccc-----cchhhhhhhcccceeeE
Confidence 1100 1267999999999999999999988776 999998765432 12334456677889999
Q ss_pred cCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccC
Q 009310 307 LGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLH 386 (538)
Q Consensus 307 ~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~ 386 (538)
....+.++....... .++.+... ...+++++++|.|++++|.+||++++..
T Consensus 207 ~~~~~~~i~~~~~~~--------------------~~~~~~~~---~~~~~~~i~~d~vi~a~G~~pn~~~l~~------ 257 (314)
T 4a5l_A 207 WNSELVELEGDGDLL--------------------NGAKIHNL---VSGEYKVVPVAGLFYAIGHSPNSKFLGG------ 257 (314)
T ss_dssp CSEEEEEEEESSSSE--------------------EEEEEEET---TTCCEEEEECSEEEECSCEEESCGGGTT------
T ss_pred eeeeeEEEEeeeecc--------------------ceeEEeec---ccccceeeccccceEecccccChhHhcc------
Confidence 999888887654221 34444422 2346789999999999999999998854
Q ss_pred CCCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHC
Q 009310 387 DLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIN 450 (538)
Q Consensus 387 ~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~ 450 (538)
.+.++++|.+ ||+++|| +.|+|||+|||+..+ .+++..|+.||+.||.++.+.|+
T Consensus 258 ~~~~~~~G~i-v~~~~~T-s~pgIyA~GDv~~~~-------~~~~~~A~~~G~~AA~~~~~yL~ 312 (314)
T 4a5l_A 258 QVKTADDGYI-LTEGPKT-SVDGVFACGDVCDRV-------YRQAIVAAGSGCMAALSCEKWLQ 312 (314)
T ss_dssp SSCBCTTSCB-CCBTTBC-SSTTEEECSTTTCSS-------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cceEcCCeeE-eCCCCcc-CCCCEEEEEeccCCc-------chHHHHHHHHHHHHHHHHHHHHh
Confidence 3667888866 8889998 999999999999851 35788999999999999998875
No 44
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=3.5e-36 Score=319.57 Aligned_cols=297 Identities=17% Similarity=0.214 Sum_probs=222.1
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC-------c---ch-----hhhhc-----CC---
Q 009310 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-------P---ML-----YELLS-----GE--- 133 (538)
Q Consensus 77 ~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~-------p---~~-----~~~~~-----g~--- 133 (538)
...+||+|||||+||++||..|++ .|++|+|||++.. ... | ++ ...+. |.
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~------~G~~V~liE~~~~-GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~ 90 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAE------LGARAAVVESHKL-GGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSC 90 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHH------TTCCEEEEESSCT-THHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHh------CCCeEEEEecCCC-CCcccccCccchHHHHHHHHHHHHHHHHHhcCccCC
Confidence 345899999999999999999999 6789999998742 111 0 00 00000 10
Q ss_pred ---CCCcc-----------ccccHHHHhccCCcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeC
Q 009310 134 ---VDAWE-----------IAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSL 199 (538)
Q Consensus 134 ---~~~~~-----------~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAt 199 (538)
.+... +...+...++..+++++.+.+..++.... .+. .++..+.||+|||||
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~~-------------~v~-~~g~~~~~d~lviAt 156 (478)
T 3dk9_A 91 EGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKP-------------TIE-VSGKKYTAPHILIAT 156 (478)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSCSSC-------------EEE-ETTEEEECSCEEECC
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeCCeE-------------EEE-ECCEEEEeeEEEEcc
Confidence 00000 11112333456789999998887765543 355 355689999999999
Q ss_pred CCCCCCC---CCCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEE
Q 009310 200 GAEPKLD---VVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAI 276 (538)
Q Consensus 200 G~~~~~p---~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv 276 (538)
|+.|..| ++||.. + ..+.++...+.. .+++|+|||+|++|+|+|..+++.+.+ |+++
T Consensus 157 G~~p~~p~~~~i~G~~-~---~~~~~~~~~~~~-------------~~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv 216 (478)
T 3dk9_A 157 GGMPSTPHESQIPGAS-L---GITSDGFFQLEE-------------LPGRSVIVGAGYIAVEMAGILSALGSK---TSLM 216 (478)
T ss_dssp CEEECCCCTTTSTTGG-G---SBCHHHHTTCCS-------------CCSEEEEECCSHHHHHHHHHHHHTTCE---EEEE
T ss_pred CCCCCCCCcCCCCCCc-e---eEchHHhhchhh-------------cCccEEEECCCHHHHHHHHHHHHcCCe---EEEE
Confidence 9999999 899975 1 223444332221 268999999999999999999988766 9999
Q ss_pred ecCCccCCCCChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCC-ceEEeecccccCC
Q 009310 277 NVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSD-KYILELQPAIKGL 355 (538)
Q Consensus 277 ~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~ 355 (538)
++.+++++.+++.+.+.+.+.|++.||++++++.|++++.+++ + .+.+.+.+...+.
T Consensus 217 ~~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~----------------------~~~~~v~~~~~~~g~ 274 (478)
T 3dk9_A 217 IRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLS----------------------GLEVSMVTAVPGRLP 274 (478)
T ss_dssp CSSSSSCTTSCHHHHHHHHHHHHHTTCEEETTEEEEEEEECSS----------------------SEEEEEEECCTTSCC
T ss_pred EeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCC----------------------CcEEEEEEccCCCCc
Confidence 9999999999999999999999999999999999999986541 1 2444443211111
Q ss_pred -cceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHH
Q 009310 356 -ESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVA 434 (538)
Q Consensus 356 -~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A 434 (538)
+++++++|.||+|+|++|+++.+.. ...+++++++|+|.||+++|+ +.|+|||+|||+.. +..+..|
T Consensus 275 ~~g~~~~~D~vi~a~G~~p~~~~l~l---~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~--------~~~~~~A 342 (478)
T 3dk9_A 275 VMTMIPDVDCLLWAIGRVPNTKDLSL---NKLGIQTDDKGHIIVDEFQNT-NVKGIYAVGDVCGK--------ALLTPVA 342 (478)
T ss_dssp EEEEEEEESEEEECSCEEESCTTSCG---GGGTCCBCTTCCBCCCTTCBC-SSTTEEECGGGGCS--------SCCHHHH
T ss_pred ccceEEEcCEEEEeeccccCCCCCCc---hhcCCeeCCCCCEeeCCCccc-CCCCEEEEEecCCC--------CccHhHH
Confidence 1378999999999999999875421 134688899999999999998 99999999999965 7889999
Q ss_pred HHHHHHHHHHHHHH
Q 009310 435 FQQADFAGWNLWAA 448 (538)
Q Consensus 435 ~~qg~~aa~~i~~~ 448 (538)
..||+.+|.||...
T Consensus 343 ~~~g~~aa~~i~~~ 356 (478)
T 3dk9_A 343 IAAGRKLAHRLFEY 356 (478)
T ss_dssp HHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHcCC
Confidence 99999999999853
No 45
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=6.8e-36 Score=302.41 Aligned_cols=308 Identities=18% Similarity=0.202 Sum_probs=226.5
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcch--hh----hhcC--CCCCccccccHHHHhccC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPML--YE----LLSG--EVDAWEIAPRFADLLANT 150 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~--~~----~~~g--~~~~~~~~~~~~~~~~~~ 150 (538)
+++|+|||||+||+++|..|++ .|++|+|||+++.+.+.... +. ...+ .....++...+.+.+.+.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~------~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 78 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGM------RGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPF 78 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGG
T ss_pred cCcEEEECCCHHHHHHHHHHHh------CCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHc
Confidence 4799999999999999999998 68899999998765332110 00 0001 011233344455566667
Q ss_pred CcEEEE-eeEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCC---CCCCCCCCCccccC-----cCCCCh
Q 009310 151 GVQFFK-DRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGA---EPKLDVVPGAAEFA-----FPFSTL 221 (538)
Q Consensus 151 ~v~~~~-~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~---~~~~p~ipG~~~~~-----~~~~~~ 221 (538)
+++++. .+|+.++.+... ..+.++++..+.||+||+|||+ .|..|++||...+. ..+.+.
T Consensus 79 ~~~~~~~~~v~~i~~~~~~-----------~~v~~~~g~~~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~~~~~~~~~~ 147 (335)
T 2zbw_A 79 NPVYSLGERAETLEREGDL-----------FKVTTSQGNAYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVYYAVKSK 147 (335)
T ss_dssp CCEEEESCCEEEEEEETTE-----------EEEEETTSCEEEEEEEEECCTTSEEEECCCCCTTTTTTBTTTEESSCSCG
T ss_pred CCEEEeCCEEEEEEECCCE-----------EEEEECCCCEEEeCEEEECCCCCCCCCCCCCCCChhhccCcEEEEecCch
Confidence 888876 488888754321 2567777778999999999999 57778888864321 111111
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCCChhhHHHHHHHHHhC
Q 009310 222 EDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSAR 301 (538)
Q Consensus 222 ~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~ 301 (538)
++ + .+++|+|||+|.+|+|+|..|.+.+.+ |+++++.+.+.+. +...+.+.+.+++.
T Consensus 148 ~~---~---------------~~~~v~viG~G~~g~e~a~~l~~~g~~---V~~v~~~~~~~~~--~~~~~~l~~~l~~~ 204 (335)
T 2zbw_A 148 AE---F---------------QGKRVLIVGGGDSAVDWALNLLDTARR---ITLIHRRPQFRAH--EASVKELMKAHEEG 204 (335)
T ss_dssp GG---G---------------TTCEEEEECSSHHHHHHHHHTTTTSSE---EEEECSSSSCCSC--HHHHHHHHHHHHTT
T ss_pred hh---c---------------CCCEEEEECCCHHHHHHHHHHHhhCCE---EEEEEcCCccCcc--HHHHHHHHhccccC
Confidence 11 0 167999999999999999999876554 9999998876543 56677788889999
Q ss_pred CCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCC
Q 009310 302 KVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPP 381 (538)
Q Consensus 302 gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~ 381 (538)
||++++++.|.+++.++.. ..++++.. ..++.+++++|.||+|+|++|+.+++...
T Consensus 205 gv~v~~~~~v~~i~~~~~~---------------------~~v~~~~~---~~g~~~~i~~D~vi~a~G~~p~~~~l~~~ 260 (335)
T 2zbw_A 205 RLEVLTPYELRRVEGDERV---------------------RWAVVFHN---QTQEELALEVDAVLILAGYITKLGPLANW 260 (335)
T ss_dssp SSEEETTEEEEEEEESSSE---------------------EEEEEEET---TTCCEEEEECSEEEECCCEEEECGGGGGS
T ss_pred CeEEecCCcceeEccCCCe---------------------eEEEEEEC---CCCceEEEecCEEEEeecCCCCchHhhhc
Confidence 9999999999999874311 13444321 01233789999999999999998877643
Q ss_pred CCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHCCCCCCCceecC
Q 009310 382 NNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQN 461 (538)
Q Consensus 382 ~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~~~~~~p~~~~~ 461 (538)
+++++ +|+|.||+++|+ +.|+|||+|||+..+. .++.+..|+.||+.+|.||.+.+.+++..++.|..
T Consensus 261 -----~~~~~-~g~i~vd~~~~t-~~~~vya~GD~~~~~~-----~~~~~~~A~~~g~~aa~~i~~~l~~~~~~~~~~~~ 328 (335)
T 2zbw_A 261 -----GLALE-KNKIKVDTTMAT-SIPGVYACGDIVTYPG-----KLPLIVLGFGEAAIAANHAAAYANPALKVNPGHSS 328 (335)
T ss_dssp -----CCCEE-TTEEECCTTCBC-SSTTEEECSTTEECTT-----CCCCHHHHHHHHHHHHHHHHHHHCTTSCSSCCCGG
T ss_pred -----ceecc-CCeeeeCCCCCC-CCCCEEEeccccccCc-----chhhhhhhHHHHHHHHHHHHHHhhhhhccCCcccc
Confidence 45666 689999999998 8999999999998632 25789999999999999999999988777776654
Q ss_pred c
Q 009310 462 L 462 (538)
Q Consensus 462 ~ 462 (538)
.
T Consensus 329 ~ 329 (335)
T 2zbw_A 329 E 329 (335)
T ss_dssp G
T ss_pred c
Confidence 3
No 46
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=7.3e-36 Score=301.05 Aligned_cols=301 Identities=19% Similarity=0.178 Sum_probs=214.5
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhh---hhcC---CCCCccccccHHHHhccC
Q 009310 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYE---LLSG---EVDAWEIAPRFADLLANT 150 (538)
Q Consensus 77 ~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~---~~~g---~~~~~~~~~~~~~~~~~~ 150 (538)
...++|+|||||+||+++|..|++ .|++|+|||++. ......... ...+ .....++...+.+.+++.
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~------~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 78 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGR------AQLSTLILEKGM-PGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKF 78 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSC-TTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHT
T ss_pred cccCCEEEECCCHHHHHHHHHHHH------cCCcEEEEeCCC-CCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHc
Confidence 345899999999999999999998 678999999983 211111000 0011 112233444556666778
Q ss_pred CcEEEEeeEEEEcCC--CCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCCCCCCccccCc-CCCChHHHHHH
Q 009310 151 GVQFFKDRVKLLCPS--DHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAF-PFSTLEDACRV 227 (538)
Q Consensus 151 ~v~~~~~~v~~i~~~--~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p~ipG~~~~~~-~~~~~~d~~~~ 227 (538)
+++++.++++.++.. ... ...+.+.++..+.||+||+|||+.|..|++||..++.. .+.......
T Consensus 79 gv~~~~~~v~~i~~~~~~~~----------~~~v~~~~g~~~~~~~vv~AtG~~~~~~~i~g~~~~~~~~~~~~~~~~-- 146 (325)
T 2q7v_A 79 GAKVEMDEVQGVQHDATSHP----------YPFTVRGYNGEYRAKAVILATGADPRKLGIPGEDNFWGKGVSTCATCD-- 146 (325)
T ss_dssp TCEEEECCEEEEEECTTSSS----------CCEEEEESSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHH--
T ss_pred CCEEEeeeEEEEEeccCCCc----------eEEEEECCCCEEEeCEEEECcCCCcCCCCCCChhhccCceEEEeccCC--
Confidence 999988899998765 320 01466667778999999999999999999999754311 111111100
Q ss_pred HHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCCChhhHHHHHHHH-HhCCCEEE
Q 009310 228 DRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVL-SARKVQLV 306 (538)
Q Consensus 228 ~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l-~~~gV~v~ 306 (538)
... ..+++|+|||+|.+|+|+|..|.+.+.+ |+++++.+.+.. . ..+.+.+ ++.||+++
T Consensus 147 -~~~----------~~~~~v~VvG~G~~g~e~A~~l~~~g~~---Vtlv~~~~~~~~--~----~~~~~~l~~~~gv~i~ 206 (325)
T 2q7v_A 147 -GFF----------YKGKKVVVIGGGDAAVEEGMFLTKFADE---VTVIHRRDTLRA--N----KVAQARAFANPKMKFI 206 (325)
T ss_dssp -GGG----------GTTCEEEEECCSHHHHHHHHHHTTTCSE---EEEECSSSSCCS--C----HHHHHHHHTCTTEEEE
T ss_pred -HHH----------cCCCEEEEECCCHHHHHHHHHHHhcCCE---EEEEeCCCcCCc--c----hHHHHHHHhcCCceEe
Confidence 100 1157999999999999999999877655 999999876532 2 2233444 45799999
Q ss_pred cCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccC
Q 009310 307 LGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLH 386 (538)
Q Consensus 307 ~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~ 386 (538)
+++.|+++..++.. .+++++.. .+++..++++|.||+|+|++|+.+++...
T Consensus 207 ~~~~v~~i~~~~~v---------------------~~v~~~~~---~~g~~~~i~~D~vi~a~G~~p~~~~l~~~----- 257 (325)
T 2q7v_A 207 WDTAVEEIQGADSV---------------------SGVKLRNL---KTGEVSELATDGVFIFIGHVPNTAFVKDT----- 257 (325)
T ss_dssp CSEEEEEEEESSSE---------------------EEEEEEET---TTCCEEEEECSEEEECSCEEESCGGGTTT-----
T ss_pred cCCceEEEccCCcE---------------------EEEEEEEC---CCCcEEEEEcCEEEEccCCCCChHHHhhh-----
Confidence 99999999874311 24555411 01123579999999999999998887642
Q ss_pred CCCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHCCCCC
Q 009310 387 DLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPL 454 (538)
Q Consensus 387 ~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~~~~~ 454 (538)
++++++|+|.||+++|+ +.|+|||+|||+..+ ++.+..|++||+.+|.||.+.+.++++
T Consensus 258 -~~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~~-------~~~~~~A~~~g~~aa~~i~~~l~~~~~ 316 (325)
T 2q7v_A 258 -VSLRDDGYVDVRDEIYT-NIPMLFAAGDVSDYI-------YRQLATSVGAGTRAAMMTERQLAALEV 316 (325)
T ss_dssp -SCBCTTSCBCCBTTTBC-SSTTEEECSTTTCSS-------CCCHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred -cccCCCccEecCCCCcc-CCCCEEEeecccCcc-------HHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 56788899999999998 999999999999851 578999999999999999999987643
No 47
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=2e-36 Score=321.59 Aligned_cols=293 Identities=18% Similarity=0.226 Sum_probs=217.7
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCc----------chh---------hhh-cCC-----
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP----------MLY---------ELL-SGE----- 133 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p----------~~~---------~~~-~g~----- 133 (538)
.+||+|||||+||+++|..|++ .|++|+|||+++.+.... ++. ... .|.
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~------~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~ 79 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAAD------EGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEP 79 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHh------CCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence 4799999999999999999998 678999999976543211 000 000 010
Q ss_pred -CCCccccc-----------cHHHHhccCCcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcCCc------------eE
Q 009310 134 -VDAWEIAP-----------RFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG------------LI 189 (538)
Q Consensus 134 -~~~~~~~~-----------~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g------------~~ 189 (538)
.+...+.. .+...++..+++++.+....++... + .+...++ ..
T Consensus 80 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~-v------------~v~~~~g~~~~~~~~~g~~~~ 146 (482)
T 1ojt_A 80 ELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDPHH-L------------EVSLTAGDAYEQAAPTGEKKI 146 (482)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTE-E------------EEEEEEEEETTEEEEEEEEEE
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEEccCCE-E------------EEEecCCcccccccccCcceE
Confidence 01111111 1234455678999988765554321 1 2333344 57
Q ss_pred EEeeEEEEeCCCCCCCCC-CCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHH
Q 009310 190 VEYDWLVLSLGAEPKLDV-VPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLE 268 (538)
Q Consensus 190 ~~yD~lVlAtG~~~~~p~-ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~ 268 (538)
+.||+||+|||+.|..|+ +| .+. .+.+.+++..+.+ .+++++|||||++|+|+|..+++.+.
T Consensus 147 i~ad~lViAtGs~p~~~~~i~-~~~---~v~~~~~~~~~~~-------------~~~~vvViGgG~ig~E~A~~l~~~G~ 209 (482)
T 1ojt_A 147 VAFKNCIIAAGSRVTKLPFIP-EDP---RIIDSSGALALKE-------------VPGKLLIIGGGIIGLEMGTVYSTLGS 209 (482)
T ss_dssp EEEEEEEECCCEEECCCSSCC-CCT---TEECHHHHTTCCC-------------CCSEEEEESCSHHHHHHHHHHHHHTC
T ss_pred EEcCEEEECCCCCCCCCCCCC-ccC---cEEcHHHHhcccc-------------cCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 999999999999988776 55 222 2345555443321 26899999999999999999998876
Q ss_pred hcCcEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEee
Q 009310 269 EKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILEL 348 (538)
Q Consensus 269 ~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 348 (538)
+ |+++++.+++++.+++++.+.+.+.|++.||++++++.|.+++.++ +.+.+.+
T Consensus 210 ~---Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~-----------------------~~~~v~~ 263 (482)
T 1ojt_A 210 R---LDVVEMMDGLMQGADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKE-----------------------DGVYVTF 263 (482)
T ss_dssp E---EEEECSSSSSSTTSCHHHHHHHHHHHGGGEEEEECSCEEEEEEEET-----------------------TEEEEEE
T ss_pred e---EEEEEECCccccccCHHHHHHHHHHHHhcCCEEEECCEEEEEEEcC-----------------------CeEEEEE
Confidence 6 9999999999999999999999999999999999999999998754 3344443
Q ss_pred cccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCC
Q 009310 349 QPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLP 428 (538)
Q Consensus 349 ~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~ 428 (538)
.+ .+++++++++|.||+|+|++||++++.. ...+++++++|+|.||+++|+ +.|+|||+|||+.. +
T Consensus 264 ~~--~~~~g~~~~~D~vv~a~G~~p~~~~l~~---~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~--------~ 329 (482)
T 1ojt_A 264 EG--ANAPKEPQRYDAVLVAAGRAPNGKLISA---EKAGVAVTDRGFIEVDKQMRT-NVPHIYAIGDIVGQ--------P 329 (482)
T ss_dssp ES--SSCCSSCEEESCEEECCCEEECGGGTTG---GGTTCCCCTTSCCCCCTTSBC-SSTTEEECGGGTCS--------S
T ss_pred ec--cCCCceEEEcCEEEECcCCCcCCCCCCh---hhcCceeCCCCCEeeCCCccc-CCCCEEEEEcccCC--------C
Confidence 31 0112667899999999999999877421 133678888899999999998 99999999999985 6
Q ss_pred ccHHHHHHHHHHHHHHHHH
Q 009310 429 ATAQVAFQQADFAGWNLWA 447 (538)
Q Consensus 429 ~~~~~A~~qg~~aa~~i~~ 447 (538)
+++..|.+||+.+|.||.+
T Consensus 330 ~l~~~A~~~g~~aa~~i~g 348 (482)
T 1ojt_A 330 MLAHKAVHEGHVAAENCAG 348 (482)
T ss_dssp CCHHHHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHHHHcC
Confidence 7899999999999999985
No 48
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=1.3e-35 Score=317.70 Aligned_cols=304 Identities=16% Similarity=0.171 Sum_probs=219.3
Q ss_pred CCCCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC--------CcccCcch----h-----------hh-
Q 009310 74 WPDKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE--------RFVFKPML----Y-----------EL- 129 (538)
Q Consensus 74 ~~~~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~--------~~~~~p~~----~-----------~~- 129 (538)
++....+||+||||||||++||..|++ .|++|+|||+++ .+...... + ..
T Consensus 27 ~~~~~~~DVvVIGgGpaGl~aA~~la~------~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~ 100 (519)
T 3qfa_A 27 LPKSYDYDLIIIGGGSGGLAAAKEAAQ------YGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQAL 100 (519)
T ss_dssp CCSSCSEEEEEECCSHHHHHHHHHHHH------TTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHH
T ss_pred cCcCCCCCEEEECCCHHHHHHHHHHHh------CCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHH
Confidence 334456899999999999999999999 678999999854 11111000 0 00
Q ss_pred ----hcCC-------CCCccccc-----------cHHHHhccCCcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcCCc
Q 009310 130 ----LSGE-------VDAWEIAP-----------RFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG 187 (538)
Q Consensus 130 ----~~g~-------~~~~~~~~-----------~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g 187 (538)
..|. .+...+.. .+...++..+++++.+.+..+++... .+...+|
T Consensus 101 ~~~~~~g~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~~~v-------------~v~~~~g 167 (519)
T 3qfa_A 101 QDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRI-------------KATNNKG 167 (519)
T ss_dssp HHHHHTTBCCCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEE-------------EEECTTC
T ss_pred HHHHhcCcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEE-------------EEEcCCC
Confidence 0011 01111111 11233455789999998888876543 4555555
Q ss_pred e--EEEeeEEEEeCCCCCCCCCCCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHH
Q 009310 188 L--IVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSE 265 (538)
Q Consensus 188 ~--~~~yD~lVlAtG~~~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~ 265 (538)
. .+.||+||||||+.|+.|++||..++. .+.+++..+. ..+++++|||+|++|+|+|..+++
T Consensus 168 ~~~~i~~d~lViATGs~p~~p~i~G~~~~~---~t~~~~~~l~-------------~~~~~vvVIGgG~ig~E~A~~l~~ 231 (519)
T 3qfa_A 168 KEKIYSAERFLIATGERPRYLGIPGDKEYC---ISSDDLFSLP-------------YCPGKTLVVGASYVALECAGFLAG 231 (519)
T ss_dssp CCCEEEEEEEEECCCEEECCCCCTTHHHHC---BCHHHHTTCS-------------SCCCSEEEECCSHHHHHHHHHHHH
T ss_pred CEEEEECCEEEEECCCCcCCCCCCCccCce---EcHHHHhhhh-------------hcCCeEEEECCcHHHHHHHHHHHH
Confidence 4 799999999999999999999975542 2344433322 126789999999999999999998
Q ss_pred HHHhcCcEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceE
Q 009310 266 RLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYI 345 (538)
Q Consensus 266 ~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 345 (538)
.+.+ |+++++ ..+++.+++++.+.+.+.|++.||++++++.++++....... .+.+.
T Consensus 232 ~G~~---Vtlv~~-~~~l~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~-------------------~~~~~ 288 (519)
T 3qfa_A 232 IGLD---VTVMVR-SILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGT-------------------PGRLR 288 (519)
T ss_dssp TTCC---EEEEES-SCSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCT-------------------TCEEE
T ss_pred cCCe---EEEEec-ccccccCCHHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCC-------------------CceEE
Confidence 8766 999998 478899999999999999999999999998888876532100 02334
Q ss_pred EeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcC-CCCCeeeCCCcccCCCCCEEEccccccccCCCC
Q 009310 346 LELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLN-ARGQAETDETLCVKGHPRIFALGDSSALRDSSG 424 (538)
Q Consensus 346 ~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~-~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~ 424 (538)
+.+... .++...++++|.||+|+|++|+++++... ..+++++ ++|+|.||+++|+ +.|+|||+|||+..
T Consensus 289 v~~~~~-~g~~~~~~~~D~vi~a~G~~p~~~~l~l~---~~gl~~~~~~G~I~Vd~~~~T-s~~~IyA~GD~~~g----- 358 (519)
T 3qfa_A 289 VVAQST-NSEEIIEGEYNTVMLAIGRDACTRKIGLE---TVGVKINEKTGKIPVTDEEQT-NVPYIYAIGDILED----- 358 (519)
T ss_dssp EEEEES-SSSCEEEEEESEEEECSCEEESCSSSCST---TTTCCCCTTTCCBCCCTTSBC-SSTTEEECGGGBSS-----
T ss_pred EEEEEC-CCcEEEEEECCEEEEecCCcccCCCCChh---hcCcEEcCCCCeEeeCCCCcc-CCCCEEEEEeccCC-----
Confidence 432210 11111467899999999999998875321 3468888 5899999999998 99999999999942
Q ss_pred CCCCccHHHHHHHHHHHHHHHHH
Q 009310 425 RPLPATAQVAFQQADFAGWNLWA 447 (538)
Q Consensus 425 ~~~~~~~~~A~~qg~~aa~~i~~ 447 (538)
.++.+..|..||+++|.||..
T Consensus 359 --~~~~~~~A~~~g~~aa~~i~g 379 (519)
T 3qfa_A 359 --KVELTPVAIQAGRLLAQRLYA 379 (519)
T ss_dssp --SCCCHHHHHHHHHHHHHHHHS
T ss_pred --CCccHHHHHHHHHHHHHHHcC
Confidence 168899999999999999984
No 49
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=1.3e-35 Score=315.75 Aligned_cols=290 Identities=17% Similarity=0.173 Sum_probs=218.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhh-cccCCCCCCEEEEEcC--------CCCcccCcch----h-----------hh---h-
Q 009310 79 KPRICILGGGFGGLYTALRLES-LVWQDDKKPQVLLVDQ--------SERFVFKPML----Y-----------EL---L- 130 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~-~~~~~~~g~~V~lie~--------~~~~~~~p~~----~-----------~~---~- 130 (538)
++||+|||||+||++||.+|++ . |++|+|||+ ++.++..... + .. .
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~------G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~ 76 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLH------KKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESA 76 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHH------CCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGG
T ss_pred cccEEEECCCHHHHHHHHHHHHHc------CCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHH
Confidence 4799999999999999999988 4 569999992 3333221100 0 00 0
Q ss_pred -cCC--------CCCcccc-----------ccHHHHhccC-CcEEEEeeEEEEcCCCCcCcCCCceeecccEEEc---CC
Q 009310 131 -SGE--------VDAWEIA-----------PRFADLLANT-GVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLL---ES 186 (538)
Q Consensus 131 -~g~--------~~~~~~~-----------~~~~~~~~~~-~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~---~~ 186 (538)
.|. .+...+. ..+...+++. +++++.+.++.++.... .+.. ++
T Consensus 77 ~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v-------------~v~~~~~~~ 143 (490)
T 1fec_A 77 GFGWELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDNHTV-------------LVRESADPN 143 (490)
T ss_dssp GGTEECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESEEEEEETTEE-------------EEESSSSTT
T ss_pred hcCcccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeEEEEeeCCEE-------------EEEeeccCC
Confidence 010 0111111 1223345567 99999998888864211 2332 25
Q ss_pred c---eEEEeeEEEEeCCCCCCCCCCCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHH
Q 009310 187 G---LIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATV 263 (538)
Q Consensus 187 g---~~~~yD~lVlAtG~~~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l 263 (538)
+ ..+.||+||||||+.|..|++||.+ + +.+.+++..+.. .+++++|||+|++|+|+|..+
T Consensus 144 g~~~~~~~~d~lviAtGs~p~~p~i~g~~-~---~~~~~~~~~~~~-------------~~~~vvViGgG~ig~E~A~~l 206 (490)
T 1fec_A 144 SAVLETLDTEYILLATGSWPQHLGIEGDD-L---CITSNEAFYLDE-------------APKRALCVGGGYISIEFAGIF 206 (490)
T ss_dssp SCEEEEEEEEEEEECCCEEECCCCSBTGG-G---CBCHHHHTTCSS-------------CCSEEEEECSSHHHHHHHHHH
T ss_pred CCceEEEEcCEEEEeCCCCCCCCCCCCcc-c---eecHHHHhhhhh-------------cCCeEEEECCCHHHHHHHHHH
Confidence 5 6899999999999999999999873 2 234444433221 268999999999999999999
Q ss_pred HHH---HHhcCcEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccC
Q 009310 264 SER---LEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKN 340 (538)
Q Consensus 264 ~~~---~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (538)
.+. +.+ |+++++.+++++.+++++.+.+.+.|++.||++++++.|++++.+++
T Consensus 207 ~~~~~~g~~---Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~--------------------- 262 (490)
T 1fec_A 207 NAYKARGGQ---VDLAYRGDMILRGFDSELRKQLTEQLRANGINVRTHENPAKVTKNAD--------------------- 262 (490)
T ss_dssp HHHSCTTCE---EEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCCEEEEEECTT---------------------
T ss_pred HhhccCcCe---EEEEEcCCCcccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC---------------------
Confidence 988 665 99999999999999999999999999999999999999999987431
Q ss_pred CCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEcccccccc
Q 009310 341 SDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALR 420 (538)
Q Consensus 341 ~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~ 420 (538)
+.+.+.+. +|+++++|.||+|+|.+|+++++.. ...+++++++|+|.||+++|+ +.|+|||+|||+..
T Consensus 263 -~~~~v~~~------~G~~i~~D~vv~a~G~~p~~~~L~l---~~~gl~~~~~G~I~Vd~~~~t-~~~~IyA~GD~~~~- 330 (490)
T 1fec_A 263 -GTRHVVFE------SGAEADYDVVMLAIGRVPRSQTLQL---EKAGVEVAKNGAIKVDAYSKT-NVDNIYAIGDVTDR- 330 (490)
T ss_dssp -SCEEEEET------TSCEEEESEEEECSCEEESCTTSCG---GGGTCCBCTTSCBCCCTTCBC-SSTTEEECGGGGCS-
T ss_pred -CEEEEEEC------CCcEEEcCEEEEccCCCcCccccCc---hhcCccCCCCCCEEECCCCcc-CCCCEEEEeccCCC-
Confidence 22444432 5668999999999999999874411 134688888999999999998 99999999999974
Q ss_pred CCCCCCCCccHHHHHHHHHHHHHHHHH
Q 009310 421 DSSGRPLPATAQVAFQQADFAGWNLWA 447 (538)
Q Consensus 421 ~~~~~~~~~~~~~A~~qg~~aa~~i~~ 447 (538)
++.+..|.+||+.+|.||..
T Consensus 331 -------~~l~~~A~~~g~~aa~~i~g 350 (490)
T 1fec_A 331 -------VMLTPVAINEGAAFVDTVFA 350 (490)
T ss_dssp -------CCCHHHHHHHHHHHHHHHHS
T ss_pred -------ccCHHHHHHHHHHHHHHhcC
Confidence 67899999999999999984
No 50
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=5.3e-36 Score=303.12 Aligned_cols=305 Identities=16% Similarity=0.140 Sum_probs=219.1
Q ss_pred CCCCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcc--hh------hh--hcCCCCCccccccH
Q 009310 74 WPDKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM--LY------EL--LSGEVDAWEIAPRF 143 (538)
Q Consensus 74 ~~~~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~--~~------~~--~~g~~~~~~~~~~~ 143 (538)
++..+++||+|||||+|||++|..|++ .|++|+|||+++.....+. +. .+ ........++...+
T Consensus 17 ~~~~~~~~vvIIG~G~aGl~aA~~l~~------~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (338)
T 3itj_A 17 RGSHVHNKVTIIGSGPAAHTAAIYLAR------AEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRM 90 (338)
T ss_dssp ----CEEEEEEECCSHHHHHHHHHHHH------TTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHH
T ss_pred CCCCCCCCEEEECcCHHHHHHHHHHHH------CCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHH
Confidence 334566899999999999999999999 6889999999652111110 00 00 01111223445556
Q ss_pred HHHhccCCcEEEEeeEEEEcCCCCcCcCCCceeecccEEEc---CCceEEEeeEEEEeCCCCCCCCCCCCccccCc-CCC
Q 009310 144 ADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLL---ESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAF-PFS 219 (538)
Q Consensus 144 ~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~---~~g~~~~yD~lVlAtG~~~~~p~ipG~~~~~~-~~~ 219 (538)
.+.+.+.+++++.+.|+.++.+.+. ..+.+ +++..+.||+||+|||+.|..|.+||...+.. .+.
T Consensus 91 ~~~~~~~gv~i~~~~v~~i~~~~~~-----------~~v~~~~~~~~~~~~~d~vvlAtG~~~~~~~~~g~~~~~~~~~~ 159 (338)
T 3itj_A 91 REQSTKFGTEIITETVSKVDLSSKP-----------FKLWTEFNEDAEPVTTDAIILATGASAKRMHLPGEETYWQKGIS 159 (338)
T ss_dssp HHHHHHTTCEEECSCEEEEECSSSS-----------EEEEETTCSSSCCEEEEEEEECCCEEECCCCCTTHHHHBTTTEE
T ss_pred HHHHHHcCCEEEEeEEEEEEEcCCE-----------EEEEEEecCCCcEEEeCEEEECcCCCcCCCCCCCchhccCccEE
Confidence 6777778999998889999876542 13433 36678999999999999999999999754211 111
Q ss_pred ChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCCChhhHHHHHHHHH
Q 009310 220 TLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLS 299 (538)
Q Consensus 220 ~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~ 299 (538)
.... ....+. ...+++|+|||+|.+|+|+|..|.+.+.+ |+++++.+.+.+ ...+.+.+.
T Consensus 160 ~~~~---~~~~~~--------~~~~~~v~vvG~G~~g~e~a~~l~~~g~~---v~~v~~~~~~~~------~~~~~~~l~ 219 (338)
T 3itj_A 160 ACAV---CDGAVP--------IFRNKPLAVIGGGDSACEEAQFLTKYGSK---VFMLVRKDHLRA------STIMQKRAE 219 (338)
T ss_dssp SCHH---HHTTSG--------GGTTSEEEEECSSHHHHHHHHHHTTTSSE---EEEECSSSSCCS------CHHHHHHHH
T ss_pred Echh---cccchh--------hcCCCEEEEECCCHHHHHHHHHHHhcCCE---EEEEEcCCccCC------CHHHHHHHH
Confidence 1111 111100 01267999999999999999999887655 999999887654 344556665
Q ss_pred hC-CCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCC
Q 009310 300 AR-KVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHV 378 (538)
Q Consensus 300 ~~-gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l 378 (538)
+. ||++++++.|.+++.+++.. ..++++.. ..++++++++|.||+|+|++|+.+++
T Consensus 220 ~~~gv~i~~~~~v~~i~~~~~~~--------------------~~v~~~~~---~~g~~~~i~~D~vi~a~G~~p~~~~~ 276 (338)
T 3itj_A 220 KNEKIEILYNTVALEAKGDGKLL--------------------NALRIKNT---KKNEETDLPVSGLFYAIGHTPATKIV 276 (338)
T ss_dssp HCTTEEEECSEEEEEEEESSSSE--------------------EEEEEEET---TTTEEEEEECSEEEECSCEEECCGGG
T ss_pred hcCCeEEeecceeEEEEcccCcE--------------------EEEEEEEC---CCCceEEEEeCEEEEEeCCCCChhHh
Confidence 55 99999999999998754211 13444411 12246789999999999999998877
Q ss_pred CCCCCccCCCCcCCCCCeee-CCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHCCC
Q 009310 379 EPPNNRLHDLPLNARGQAET-DETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDR 452 (538)
Q Consensus 379 ~~~~~~~~~~~l~~~G~i~v-d~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~~~ 452 (538)
.. +++++++|++.| |+++++ +.|+|||+|||+.. .++.+..|+.||+.+|.||.+.+.++
T Consensus 277 ~~------~l~~~~~G~i~v~~~~~~t-~~~~vya~GD~~~~-------~~~~~~~A~~~g~~aa~~i~~~l~~~ 337 (338)
T 3itj_A 277 AG------QVDTDEAGYIKTVPGSSLT-SVPGFFAAGDVQDS-------KYRQAITSAGSGCMAALDAEKYLTSL 337 (338)
T ss_dssp BT------TBCBCTTSCBCCCTTSSBC-SSTTEEECGGGGCS-------SCCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hC------ceEecCCCcEEEcCccccc-CCCCEEEeeccCCC-------CccceeeehhhhHHHHHHHHHHHhcC
Confidence 53 578889999995 788888 99999999999974 26889999999999999999999875
No 51
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=8e-36 Score=318.27 Aligned_cols=293 Identities=19% Similarity=0.259 Sum_probs=208.8
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC-------c---ch-----hhhh-----cCC-----
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-------P---ML-----YELL-----SGE----- 133 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~-------p---~~-----~~~~-----~g~----- 133 (538)
++||||||||+||++||..|++ .|++|+|||+++. +.. | ++ ...+ .|.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~------~g~~V~liE~~~~-GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~ 74 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAAR------HNAKVALVEKSRL-GGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFS 74 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH------TTCCEEEEESSST-THHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCC
T ss_pred ccCEEEECCCHHHHHHHHHHHH------CCCcEEEEeCCCc-CccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCc
Confidence 4799999999999999999998 6789999999852 111 1 00 0000 011
Q ss_pred CCCcc-----------ccccHHHHhccCCcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcC-------------CceE
Q 009310 134 VDAWE-----------IAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLE-------------SGLI 189 (538)
Q Consensus 134 ~~~~~-----------~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~-------------~g~~ 189 (538)
.+... +...+...++..+++++.+.+..++.. ++.+. ++..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~id~~---------------~v~v~~~~~~~~~~~~~~~~~~ 139 (500)
T 1onf_A 75 FNLPLLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSEN---------------RILIKGTKDNNNKDNGPLNEEI 139 (500)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCCCC----------------------------------------
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCC---------------EEEEEeccccccccccCCCceE
Confidence 01111 111223444567899998876555431 12222 2567
Q ss_pred EEeeEEEEeCCCCCCCCCCCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHh
Q 009310 190 VEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEE 269 (538)
Q Consensus 190 ~~yD~lVlAtG~~~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~ 269 (538)
+.||+||+|||+.|..|++||.+ + +.+.+++..+ .. +++|+|||+|++|+|+|..|++.+.+
T Consensus 140 ~~~d~lViAtGs~p~~p~i~G~~-~---~~~~~~~~~~-------------~~-~~~vvViGgG~ig~E~A~~l~~~g~~ 201 (500)
T 1onf_A 140 LEGRNILIAVGNKPVFPPVKGIE-N---TISSDEFFNI-------------KE-SKKIGIVGSGYIAVELINVIKRLGID 201 (500)
T ss_dssp -CBSSEEECCCCCBCCCSCTTGG-G---CEEHHHHTTC-------------CC-CSEEEEECCSHHHHHHHHHHHTTTCE
T ss_pred EEeCEEEECCCCCCCCCCCCCCC-c---ccCHHHHhcc-------------CC-CCeEEEECChHHHHHHHHHHHHcCCe
Confidence 99999999999999999999973 2 2233333221 11 57999999999999999999887665
Q ss_pred cCcEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeec
Q 009310 270 KGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQ 349 (538)
Q Consensus 270 ~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 349 (538)
|+++++.+++++.+++++.+.+.+.|+++||++++++.|++++.+++ +.+.+.+.
T Consensus 202 ---Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~----------------------~~~~v~~~ 256 (500)
T 1onf_A 202 ---SYIFARGNRILRKFDESVINVLENDMKKNNINIVTFADVVEIKKVSD----------------------KNLSIHLS 256 (500)
T ss_dssp ---EEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESST----------------------TCEEEEET
T ss_pred ---EEEEecCCccCcccchhhHHHHHHHHHhCCCEEEECCEEEEEEEcCC----------------------ceEEEEEC
Confidence 99999999999999999999999999999999999999999987431 22444432
Q ss_pred ccccCCcceE-EeccEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCC------
Q 009310 350 PAIKGLESQI-FEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDS------ 422 (538)
Q Consensus 350 ~~~~~~~g~~-l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~------ 422 (538)
+|++ +++|.||+|+|.+|+++.+... ..++++ ++|+|.||+++|+ +.|+|||+|||+..++.
T Consensus 257 ------~g~~~~~~D~vi~a~G~~p~~~~l~~~---~~g~~~-~~G~i~vd~~~~t-~~~~iya~GD~~~~~~~~~~~~~ 325 (500)
T 1onf_A 257 ------DGRIYEHFDHVIYCVGRSPDTENLKLE---KLNVET-NNNYIVVDENQRT-SVNNIYAVGDCCMVKKSKEIEDL 325 (500)
T ss_dssp ------TSCEEEEESEEEECCCBCCTTTTSSCT---TTTCCB-SSSCEEECTTCBC-SSSSEEECSTTEEEC--------
T ss_pred ------CCcEEEECCEEEECCCCCcCCCCCCch---hcCccc-cCCEEEECCCccc-CCCCEEEEecccccccccccccc
Confidence 5566 9999999999999998644111 235777 7899999999998 99999999999953210
Q ss_pred ------------------CC--CCCCccHHHHHHHHHHHHHHHHH
Q 009310 423 ------------------SG--RPLPATAQVAFQQADFAGWNLWA 447 (538)
Q Consensus 423 ------------------~~--~~~~~~~~~A~~qg~~aa~~i~~ 447 (538)
.+ ...++.+..|.+||+++|.||.+
T Consensus 326 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g 370 (500)
T 1onf_A 326 NLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFL 370 (500)
T ss_dssp ----------------------CBCCCCHHHHHHHHHHHHHHHHS
T ss_pred ccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhC
Confidence 00 02467899999999999999984
No 52
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=4.3e-36 Score=317.49 Aligned_cols=289 Identities=24% Similarity=0.289 Sum_probs=217.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC-------c---chh-----hhh-----cCC-----
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-------P---MLY-----ELL-----SGE----- 133 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~-------p---~~~-----~~~-----~g~----- 133 (538)
++||||||||+||++||..|++ .|++|+|||+++ ++.. | ++. ..+ .|.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~------~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~ 78 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQ------LGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPE 78 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCE
T ss_pred cCCEEEECcCHHHHHHHHHHHH------CCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCC
Confidence 4799999999999999999998 678999999986 2111 1 000 000 010
Q ss_pred CCCccccc-----------cHHHHhccCCcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCC
Q 009310 134 VDAWEIAP-----------RFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAE 202 (538)
Q Consensus 134 ~~~~~~~~-----------~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~ 202 (538)
.+...+.. .+..+++..+++++.+++..++.. ++.++ +..+.||+||+|||++
T Consensus 79 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~---------------~v~v~-g~~~~~d~lViATGs~ 142 (464)
T 2eq6_A 79 LDLKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPK---------------EVEVG-GERYGAKSLILATGSE 142 (464)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETT---------------EEEET-TEEEEEEEEEECCCEE
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEccCC---------------EEEEc-cEEEEeCEEEEcCCCC
Confidence 01111111 123345567899999877666431 35555 5689999999999999
Q ss_pred CCCCC-CCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCc
Q 009310 203 PKLDV-VPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT 281 (538)
Q Consensus 203 ~~~p~-ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~ 281 (538)
|+.|+ +|| .+ .+.+.+++..+.+. .+++|+|||+|++|+|+|..+++.+.+ |+++++.++
T Consensus 143 p~~p~gi~~-~~---~v~~~~~~~~l~~~------------~~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~ 203 (464)
T 2eq6_A 143 PLELKGFPF-GE---DVWDSTRALKVEEG------------LPKRLLVIGGGAVGLELGQVYRRLGAE---VTLIEYMPE 203 (464)
T ss_dssp ECCBTTBCC-SS---SEECHHHHTCGGGC------------CCSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSS
T ss_pred CCCCCCCCC-CC---cEEcHHHHHhhhhh------------cCCEEEEECCCHHHHHHHHHHHHCCCe---EEEEEcCCc
Confidence 98875 666 22 23356665544331 168999999999999999999887665 999999999
Q ss_pred cCCCCChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcce--E
Q 009310 282 ICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQ--I 359 (538)
Q Consensus 282 ~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~--~ 359 (538)
+++.+++++.+.+.+.+++.||++++++.|++++.++ +.+.+.+.. +.+|+ +
T Consensus 204 ~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~-----------------------~~~~v~~~~---~~~g~~~~ 257 (464)
T 2eq6_A 204 ILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKK-----------------------DGLHVRLEP---AEGGEGEE 257 (464)
T ss_dssp SSTTSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEET-----------------------TEEEEEEEE---TTCCSCEE
T ss_pred cccccCHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeC-----------------------CEEEEEEee---cCCCceeE
Confidence 9999999999999999999999999999999998754 334444321 10144 8
Q ss_pred EeccEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHH
Q 009310 360 FEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQAD 439 (538)
Q Consensus 360 l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~ 439 (538)
+++|.||+|+|.+|+++++.. ...+++++++|+|.||+++|+ +.|+|||+|||+.. +..+..|..||+
T Consensus 258 i~~D~vv~a~G~~p~~~~l~l---~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~--------~~l~~~A~~~g~ 325 (464)
T 2eq6_A 258 VVVDKVLVAVGRKPRTEGLGL---EKAGVKVDERGFIRVNARMET-SVPGVYAIGDAARP--------PLLAHKAMREGL 325 (464)
T ss_dssp EEESEEEECSCEEESCTTSSH---HHHTCCBCTTSCBCCCTTCBC-SSTTEEECGGGTCS--------SCCHHHHHHHHH
T ss_pred EEcCEEEECCCcccCCCCCCh---hhcCceecCCCCEEECCCccc-CCCCEEEEeccCCC--------cccHHHHHHHHH
Confidence 999999999999999876521 134677888999999999998 89999999999985 678999999999
Q ss_pred HHHHHHHH
Q 009310 440 FAGWNLWA 447 (538)
Q Consensus 440 ~aa~~i~~ 447 (538)
.+|.||.+
T Consensus 326 ~aa~~i~g 333 (464)
T 2eq6_A 326 IAAENAAG 333 (464)
T ss_dssp HHHHHHTT
T ss_pred HHHHHhcC
Confidence 99999985
No 53
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=9.5e-36 Score=314.94 Aligned_cols=286 Identities=20% Similarity=0.269 Sum_probs=219.7
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcch---------------hhh---hc--C------
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPML---------------YEL---LS--G------ 132 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~---------------~~~---~~--g------ 132 (538)
.+||+|||||+||+++|..|++ .|++|+|||++. ++..... ... .. +
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~------~G~~V~liEk~~-~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~ 77 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAA------LGKKVAIAEEFR-YGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGES 77 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT------TTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCC
T ss_pred CCcEEEECcCHHHHHHHHHHHh------CCCEEEEEeCCC-CCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 4799999999999999999998 688999999943 2211000 000 00 0
Q ss_pred CCCCc-----------cccccHHHHhccCCcEEEEeeEEEEcCCCCcCcCCCceeecccEEEc-CCceEEEeeEEEEeCC
Q 009310 133 EVDAW-----------EIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLL-ESGLIVEYDWLVLSLG 200 (538)
Q Consensus 133 ~~~~~-----------~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~-~~g~~~~yD~lVlAtG 200 (538)
..+.. .+...+..++...+++++.+++..++.. ++.+ +++..+.||+||+|||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~---------------~v~~~~~~~~~~~d~lviAtG 142 (463)
T 4dna_A 78 RFDWAKLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAGPN---------------TVKLLASGKTVTAERIVIAVG 142 (463)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSS---------------EEEETTTTEEEEEEEEEECCC
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCC---------------EEEEecCCeEEEeCEEEEecC
Confidence 00100 1111233344556899999988777532 3555 4667899999999999
Q ss_pred CCCC-CCCCCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecC
Q 009310 201 AEPK-LDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVE 279 (538)
Q Consensus 201 ~~~~-~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~ 279 (538)
+.|. .|++||.+ . +.+.++...+.. .+++++|||+|++|+|+|..+.+.+.+ |+++++.
T Consensus 143 ~~p~~~p~i~G~~-~---~~~~~~~~~~~~-------------~~~~v~ViGgG~~g~e~A~~l~~~g~~---Vt~v~~~ 202 (463)
T 4dna_A 143 GHPSPHDALPGHE-L---CITSNEAFDLPA-------------LPESILIAGGGYIAVEFANIFHGLGVK---TTLIYRG 202 (463)
T ss_dssp EEECCCTTSTTGG-G---CBCHHHHTTCSS-------------CCSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSS
T ss_pred CCcccCCCCCCcc-c---cccHHHHhhhhc-------------CCCeEEEECCCHHHHHHHHHHHHcCCe---EEEEEcC
Confidence 9999 99999974 2 234444333221 268999999999999999999887765 9999999
Q ss_pred CccCCCCChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEe-ecccccCCcce
Q 009310 280 TTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILE-LQPAIKGLESQ 358 (538)
Q Consensus 280 ~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~g~ 358 (538)
+.+++.+++.+.+.+.+.+++.||++++++.|++++.+++ +.+.+. +. +|+
T Consensus 203 ~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~----------------------~~~~v~~~~------~g~ 254 (463)
T 4dna_A 203 KEILSRFDQDMRRGLHAAMEEKGIRILCEDIIQSVSADAD----------------------GRRVATTMK------HGE 254 (463)
T ss_dssp SSSSTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEECTT----------------------SCEEEEESS------SCE
T ss_pred CccccccCHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCC----------------------CEEEEEEcC------CCe
Confidence 9999999999999999999999999999999999987541 223443 32 566
Q ss_pred EEeccEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHH
Q 009310 359 IFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQA 438 (538)
Q Consensus 359 ~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg 438 (538)
+++|.||+|+|++|+++++.. ...+++++++|+|.||+++|+ +.|+|||+|||+.. ++.+..|..||
T Consensus 255 -i~aD~Vv~a~G~~p~~~~l~l---~~~g~~~~~~G~i~vd~~~~t-~~~~iya~GD~~~~--------~~~~~~A~~~g 321 (463)
T 4dna_A 255 -IVADQVMLALGRMPNTNGLGL---EAAGVRTNELGAIIVDAFSRT-STPGIYALGDVTDR--------VQLTPVAIHEA 321 (463)
T ss_dssp -EEESEEEECSCEEESCTTSST---GGGTCCBCTTSCBCCCTTCBC-SSTTEEECSGGGSS--------CCCHHHHHHHH
T ss_pred -EEeCEEEEeeCcccCCCCCCc---cccCceECCCCCEeECcCCCC-CCCCEEEEEecCCC--------CCChHHHHHHH
Confidence 999999999999999887431 134788999999999999997 99999999999985 78899999999
Q ss_pred HHHHHHHHH
Q 009310 439 DFAGWNLWA 447 (538)
Q Consensus 439 ~~aa~~i~~ 447 (538)
+.+|.||.+
T Consensus 322 ~~aa~~i~g 330 (463)
T 4dna_A 322 MCFIETEYK 330 (463)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHcC
Confidence 999999985
No 54
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.9e-35 Score=296.37 Aligned_cols=296 Identities=17% Similarity=0.150 Sum_probs=202.4
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhh---cCC--CCCccccccHHHHhccCCc
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELL---SGE--VDAWEIAPRFADLLANTGV 152 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~---~g~--~~~~~~~~~~~~~~~~~~v 152 (538)
+.+|||||||||||++||.+|++ .|++|+|||++.. .......... ++. ....++.........+...
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~------~g~~V~liE~~~~-gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~ 77 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASR------ANLKTVMIERGIP-GGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGA 77 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSCT-TGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHH------CCCCEEEEecCCC-CCeeecccccCCcCCccccchHHHHHHHHHHHhhccc
Confidence 45899999999999999999999 6789999998642 1111111111 111 1112222333344445556
Q ss_pred EEEEe-eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCCCCCCccccCcCCCChHHHHHHHHHH
Q 009310 153 QFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKL 231 (538)
Q Consensus 153 ~~~~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p~ipG~~~~~~~~~~~~d~~~~~~~l 231 (538)
.+... .+...+.... .+...++.++.||+||||||++|+.|++||.++................
T Consensus 78 ~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~d~liiAtGs~~~~~~ipG~~~~~~~~v~~~~~~~~~~-- 142 (312)
T 4gcm_A 78 VYQYGDIKSVEDKGEY-------------KVINFGNKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGAF-- 142 (312)
T ss_dssp EEEECCCCEEEECSSC-------------EEEECSSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGGG--
T ss_pred cccceeeeeeeeeecc-------------eeeccCCeEEEeceeEEcccCccCcCCCCChhhhCCccEEeeeccCccc--
Confidence 55554 2333322222 3455567799999999999999999999997643211000111111000
Q ss_pred HHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEEcCcee
Q 009310 232 SELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFV 311 (538)
Q Consensus 232 ~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V 311 (538)
.++++|+|||||++|+|+|..+++.+.+ |+++++.+++++.. ....+.+++.++.......+
T Consensus 143 ----------~~~k~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 204 (312)
T 4gcm_A 143 ----------FKNKRLFVIGGGDSAVEEGTFLTKFADK---VTIVHRRDELRAQR-----ILQDRAFKNDKIDFIWSHTL 204 (312)
T ss_dssp ----------GTTCEEEEECCSHHHHHHHHHHTTTCSE---EEEECSSSSCCSCH-----HHHHHHHHCTTEEEECSEEE
T ss_pred ----------cCCCEEEEECCCHHHHHHHHHHHhcCCE---EEEEecccccCcch-----hHHHHHHHhcCcceeeecce
Confidence 0167999999999999999999887766 99999998876531 22345677889999888877
Q ss_pred eEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcC
Q 009310 312 RCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLN 391 (538)
Q Consensus 312 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~ 391 (538)
..+...+... ........ ...++..+++|.|++++|.+|+..++...+ + .+
T Consensus 205 ~~~~~~~~~~--------------------~~~~~~~~---~~~~~~~~~~d~v~~~~g~~~~~~~~~~~g-----~-~~ 255 (312)
T 4gcm_A 205 KSINEKDGKV--------------------GSVTLTST---KDGSEETHEADGVFIYIGMKPLTAPFKDLG-----I-TN 255 (312)
T ss_dssp EEEEEETTEE--------------------EEEEEEET---TTCCEEEEECSEEEECSCEEESCGGGGGGT-----C-BC
T ss_pred eeeecccccc--------------------ccceeeee---cCCceeEEeeeeEEeecCCCcCchhHHhcc-----e-ec
Confidence 7666543211 11111111 233677899999999999999988776433 2 46
Q ss_pred CCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHC
Q 009310 392 ARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIN 450 (538)
Q Consensus 392 ~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~ 450 (538)
++|+|.||+++|| +.|+|||+|||+.. .++++..|+.||+.||.||.+.++
T Consensus 256 ~~G~I~vd~~~~T-s~pgIyA~GDv~~~-------~~~~~~~A~~~G~~AA~~i~~~L~ 306 (312)
T 4gcm_A 256 DVGYIVTKDDMTT-SVPGIFAAGDVRDK-------GLRQIVTATGDGSIAAQSAAEYIE 306 (312)
T ss_dssp TTSCBCCCTTSBC-SSTTEEECSTTBSC-------SCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEeeCCCCcc-CCCCEEEEeecCCC-------cchHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999 99999999999973 157889999999999999998775
No 55
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=1.2e-35 Score=297.36 Aligned_cols=300 Identities=16% Similarity=0.094 Sum_probs=216.4
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEE-EcCCCCcccCc----chhhhh--cCCCCCccccccHHHHhccC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLL-VDQSERFVFKP----MLYELL--SGEVDAWEIAPRFADLLANT 150 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~l-ie~~~~~~~~p----~~~~~~--~g~~~~~~~~~~~~~~~~~~ 150 (538)
.++||+|||||+|||+||..|++ .|++|+| ||+. .+.... ....+. .......++...+.+++.+.
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~------~g~~v~li~e~~-~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATR------GGLKNVVMFEKG-MPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRF 75 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHH------HTCSCEEEECSS-STTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTT
T ss_pred CCceEEEECCCHHHHHHHHHHHH------CCCCeEEEEeCC-CCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHc
Confidence 45899999999999999999998 5789999 9994 322211 111111 11223345566677778888
Q ss_pred CcEEEEeeEEEEcCCC--CcCcCCCceeecccEE-EcCCceEEEeeEEEEeCCCCCCCCCCCCccccCc-CCCChHHHHH
Q 009310 151 GVQFFKDRVKLLCPSD--HLGVNGPMACTHGGTV-LLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAF-PFSTLEDACR 226 (538)
Q Consensus 151 ~v~~~~~~v~~i~~~~--~~~~~~~~~~~~~~~v-~~~~g~~~~yD~lVlAtG~~~~~p~ipG~~~~~~-~~~~~~d~~~ 226 (538)
+++++.++|..+ .+. +. ..+ ...++ .+.||+||+|||+.|+.|.+||...+.. .+.......
T Consensus 76 ~v~~~~~~v~~i-~~~~~~~-----------~~v~~~~~~-~~~~d~lvlAtG~~~~~~~~~g~~~~~~~~~~~~~~~~- 141 (315)
T 3r9u_A 76 GLKHEMVGVEQI-LKNSDGS-----------FTIKLEGGK-TELAKAVIVCTGSAPKKAGFKGEDEFFGKGVSTCATCD- 141 (315)
T ss_dssp CCEEECCCEEEE-EECTTSC-----------EEEEETTSC-EEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHHH-
T ss_pred CcEEEEEEEEEE-ecCCCCc-----------EEEEEecCC-EEEeCEEEEeeCCCCCCCCCCChhhcCCCeEEeeeccc-
Confidence 999998888888 443 21 132 22233 8999999999999999999999764311 111111111
Q ss_pred HHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEE
Q 009310 227 VDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLV 306 (538)
Q Consensus 227 ~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~ 306 (538)
... ..+++|+|||+|++|+|+|..|.+.+.+ |+++++.+.+.. . .+...+.+++.||+++
T Consensus 142 --~~~----------~~~~~v~viG~g~~~~e~a~~l~~~g~~---v~~~~~~~~~~~--~---~~~~~~~~~~~gv~~~ 201 (315)
T 3r9u_A 142 --GFF----------YKNKEVAVLGGGDTALEEALYLANICSK---IYLIHRRDEFRA--A---PSTVEKVKKNEKIELI 201 (315)
T ss_dssp --GGG----------GTTSEEEEECCBHHHHHHHHHHHTTSSE---EEEECSSSSCBS--C---HHHHHHHHHCTTEEEE
T ss_pred --ccc----------cCcCEEEEECCCHHHHHHHHHHHhhCCE---EEEEEeCCCCCC--C---HHHHHHHHhcCCeEEE
Confidence 100 0167999999999999999999887655 999999887621 2 2344556678999999
Q ss_pred cCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccC
Q 009310 307 LGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLH 386 (538)
Q Consensus 307 ~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~ 386 (538)
+++.|.++..+++.. .+++++.. +++..++++|.||+|+|++|+.+++.... ..
T Consensus 202 ~~~~v~~i~~~~~~~--------------------~~v~~~~~----~g~~~~~~~D~vv~a~G~~p~~~~~~~~~--~~ 255 (315)
T 3r9u_A 202 TSASVDEVYGDKMGV--------------------AGVKVKLK----DGSIRDLNVPGIFTFVGLNVRNEILKQDD--SK 255 (315)
T ss_dssp CSCEEEEEEEETTEE--------------------EEEEEECT----TSCEEEECCSCEEECSCEEECCGGGBCTT--SC
T ss_pred eCcEEEEEEcCCCcE--------------------EEEEEEcC----CCCeEEeecCeEEEEEcCCCCchhhhccc--cc
Confidence 999999998754111 23555421 11234899999999999999988776421 23
Q ss_pred C-CCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHCCC
Q 009310 387 D-LPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDR 452 (538)
Q Consensus 387 ~-~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~~~ 452 (538)
+ ++++++|+|.||+++|+ +.|+|||+|||+.. .++.+..|+.||+.+|.||.+.+.++
T Consensus 256 g~l~~~~~g~i~vd~~~~t-~~~~v~a~GD~~~~-------~~~~~~~A~~~g~~aa~~i~~~l~~~ 314 (315)
T 3r9u_A 256 FLCNMEEGGQVSVDLKMQT-SVAGLFAAGDLRKD-------APKQVICAAGDGAVAALSAMAYIESL 314 (315)
T ss_dssp BSSCBCTTSCBCCCTTCBC-SSTTEEECGGGBTT-------CCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ceeeecCCCcEEeCCCccc-CCCCEEEeecccCC-------chhhhhhHHhhHHHHHHHHHHHHHhc
Confidence 4 78889999999999999 99999999999863 17899999999999999999988654
No 56
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=2.5e-35 Score=313.67 Aligned_cols=295 Identities=18% Similarity=0.242 Sum_probs=217.6
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC--------CcccC-------c---chh---------hh-
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE--------RFVFK-------P---MLY---------EL- 129 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~--------~~~~~-------p---~~~---------~~- 129 (538)
..+||+||||||||++||..|++ .|++|+|||+++ .+... | ++. ..
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~------~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~ 78 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQ------LGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAH 78 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH------TTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHh------CCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHH
Confidence 45899999999999999999998 678999999732 22111 0 000 00
Q ss_pred hcCC-------CCCccccc-----------cHHHHhccCCcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcCCc--eE
Q 009310 130 LSGE-------VDAWEIAP-----------RFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG--LI 189 (538)
Q Consensus 130 ~~g~-------~~~~~~~~-----------~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g--~~ 189 (538)
..|. .+...+.. .+...+...+++++.+.+..+++... .+...+| ..
T Consensus 79 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~~~~~v-------------~v~~~~g~~~~ 145 (488)
T 3dgz_A 79 HYGWEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTV-------------RGVDKGGKATL 145 (488)
T ss_dssp HTTCCCCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEESSSSEE-------------EEECTTSCEEE
T ss_pred hcCcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeE-------------EEEeCCCceEE
Confidence 0011 11111111 12233455789999988887765432 4555555 57
Q ss_pred EEeeEEEEeCCCCCCCCC-CCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHH
Q 009310 190 VEYDWLVLSLGAEPKLDV-VPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLE 268 (538)
Q Consensus 190 ~~yD~lVlAtG~~~~~p~-ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~ 268 (538)
+.||+||||||+.|..|+ +||..++.+ +.+++..+.. .+++++|||+|++|+|+|..+++.+.
T Consensus 146 ~~~d~lViATGs~p~~p~~i~G~~~~~~---~~~~~~~~~~-------------~~~~vvViGgG~ig~E~A~~l~~~g~ 209 (488)
T 3dgz_A 146 LSAEHIVIATGGRPRYPTQVKGALEYGI---TSDDIFWLKE-------------SPGKTLVVGASYVALECAGFLTGIGL 209 (488)
T ss_dssp EEEEEEEECCCEEECCCSSCBTHHHHCB---CHHHHTTCSS-------------CCCSEEEECCSHHHHHHHHHHHHTTC
T ss_pred EECCEEEEcCCCCCCCCCCCCCcccccC---cHHHHHhhhh-------------cCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 999999999999999998 999755432 3444333221 26799999999999999999998876
Q ss_pred hcCcEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEee
Q 009310 269 EKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILEL 348 (538)
Q Consensus 269 ~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 348 (538)
+ |+++++. .+++.+++++.+.+.+.|++.||++++++.+.++...++ +.+.+.+
T Consensus 210 ~---Vtlv~~~-~~l~~~d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~----------------------~~~~v~~ 263 (488)
T 3dgz_A 210 D---TTVMMRS-IPLRGFDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPT----------------------NQLQVTW 263 (488)
T ss_dssp C---EEEEESS-CSSTTSCHHHHHHHHHHHHHTTCEEEETEEEEEEEECTT----------------------SCEEEEE
T ss_pred c---eEEEEcC-cccccCCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCC----------------------CcEEEEE
Confidence 6 9999985 578888999999999999999999999999999976331 3344443
Q ss_pred cccccCCcce--EEeccEEEEecCCCCCCCCCCCCCCccCCCCcC-CCCCeeeCCCcccCCCCCEEEccccccccCCCCC
Q 009310 349 QPAIKGLESQ--IFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLN-ARGQAETDETLCVKGHPRIFALGDSSALRDSSGR 425 (538)
Q Consensus 349 ~~~~~~~~g~--~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~-~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~ 425 (538)
. ...+++ ++++|.||+|+|++|+++++... ..+++++ ++|+|.||+++|+ +.|+|||+|||+..
T Consensus 264 ~---~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~---~~g~~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~------ 330 (488)
T 3dgz_A 264 E---DHASGKEDTGTFDTVLWAIGRVPETRTLNLE---KAGISTNPKNQKIIVDAQEAT-SVPHIYAIGDVAEG------ 330 (488)
T ss_dssp E---ETTTTEEEEEEESEEEECSCEEESCGGGTGG---GGTCCBCSSSCCBCCCTTSBC-SSTTEEECGGGBTT------
T ss_pred E---eCCCCeeEEEECCEEEEcccCCcccCcCCcc---ccCcEecCCCCeEeECCCCcc-CCCCEEEeEEecCC------
Confidence 3 111233 58999999999999998875321 3468888 7899999999998 99999999999852
Q ss_pred CCCccHHHHHHHHHHHHHHHHH
Q 009310 426 PLPATAQVAFQQADFAGWNLWA 447 (538)
Q Consensus 426 ~~~~~~~~A~~qg~~aa~~i~~ 447 (538)
.+..+..|..||+.+|.||..
T Consensus 331 -~~~~~~~A~~~g~~aa~~i~g 351 (488)
T 3dgz_A 331 -RPELTPTAIKAGKLLAQRLFG 351 (488)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHS
T ss_pred -CCcchhHHHHHHHHHHHHHcC
Confidence 267899999999999999984
No 57
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=6.2e-36 Score=315.73 Aligned_cols=289 Identities=22% Similarity=0.245 Sum_probs=218.8
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcc----------hh-----hhh----cCC------C
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM----------LY-----ELL----SGE------V 134 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~----------~~-----~~~----~g~------~ 134 (538)
+||+|||||+||+++|..|++ .|++|+|||+++.++.... +. ..+ .|. .
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~------~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~ 75 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQ------LGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVEL 75 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEE
T ss_pred CCEEEECCChhHHHHHHHHHH------CCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCcc
Confidence 699999999999999999998 6789999999875432210 00 000 000 0
Q ss_pred CCcccc-----------ccHHHHhccCCcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCC
Q 009310 135 DAWEIA-----------PRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEP 203 (538)
Q Consensus 135 ~~~~~~-----------~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~ 203 (538)
+...+. ..+..+++..+++++.+.+..+++... .+.+ ++..+.||+||+|||+.|
T Consensus 76 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~-------------~v~~-~g~~~~~d~lviAtG~~p 141 (455)
T 2yqu_A 76 DLPALMAHKDKVVQANTQGVEFLFKKNGIARHQGTARFLSERKV-------------LVEE-TGEELEARYILIATGSAP 141 (455)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEE-------------EETT-TCCEEEEEEEEECCCEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeE-------------EEee-CCEEEEecEEEECCCCCC
Confidence 111110 112344555689999887665543211 3433 567899999999999999
Q ss_pred CCCCCCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccC
Q 009310 204 KLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTIC 283 (538)
Q Consensus 204 ~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l 283 (538)
..|+++|.... .+.+.+++..+. ..+++|+|||+|++|+|+|..+++.+.+ |+++++.+.++
T Consensus 142 ~~~~~~g~~~~--~v~~~~~~~~~~-------------~~~~~vvIiGgG~~g~e~A~~l~~~g~~---V~lv~~~~~~l 203 (455)
T 2yqu_A 142 LIPPWAQVDYE--RVVTSTEALSFP-------------EVPKRLIVVGGGVIGLELGVVWHRLGAE---VIVLEYMDRIL 203 (455)
T ss_dssp CCCTTBCCCSS--SEECHHHHTCCS-------------SCCSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSC
T ss_pred CCCCCCCCCcC--cEechHHhhccc-------------cCCCeEEEECCCHHHHHHHHHHHHcCCE---EEEEecCCccc
Confidence 99988886431 233444433221 1268999999999999999999887665 99999999999
Q ss_pred CCCChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEecc
Q 009310 284 PTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEAD 363 (538)
Q Consensus 284 ~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D 363 (538)
+..++.+.+.+.+.+++.||+++++++|++++.++ +.+.+.+. +++++++|
T Consensus 204 ~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~-----------------------~~v~v~~~------~g~~i~~D 254 (455)
T 2yqu_A 204 PTMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEA-----------------------KGARVELE------GGEVLEAD 254 (455)
T ss_dssp TTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEEET-----------------------TEEEEEET------TSCEEEES
T ss_pred cccCHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC-----------------------CEEEEEEC------CCeEEEcC
Confidence 99999999999999999999999999999998754 44555542 56789999
Q ss_pred EEEEecCCCCCCCCCCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHH
Q 009310 364 LVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGW 443 (538)
Q Consensus 364 ~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~ 443 (538)
.||+|+|.+|+.+++.. ...+++++++|+|.||+++|+ +.|+||++|||+.. ++.+..|..||+.+|.
T Consensus 255 ~vv~A~G~~p~~~~l~~---~~~g~~~~~~g~i~vd~~~~t-~~~~iya~GD~~~~--------~~~~~~A~~~g~~aa~ 322 (455)
T 2yqu_A 255 RVLVAVGRRPYTEGLSL---ENAGLSTDERGRIPVDEHLRT-RVPHIYAIGDVVRG--------PMLAHKASEEGIAAVE 322 (455)
T ss_dssp EEEECSCEEECCTTCCG---GGGTCCCCTTSCCCCCTTSBC-SSTTEEECGGGSSS--------CCCHHHHHHHHHHHHH
T ss_pred EEEECcCCCcCCCCCCh---hhcCCccCCCCcEeECCCccc-CCCCEEEEecCCCC--------ccCHHHHHHhHHHHHH
Confidence 99999999999876421 134677888899999999998 89999999999985 6789999999999999
Q ss_pred HHHH
Q 009310 444 NLWA 447 (538)
Q Consensus 444 ~i~~ 447 (538)
||.+
T Consensus 323 ~i~~ 326 (455)
T 2yqu_A 323 HMVR 326 (455)
T ss_dssp HHHH
T ss_pred HHcC
Confidence 9986
No 58
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=7.9e-35 Score=309.51 Aligned_cols=297 Identities=19% Similarity=0.222 Sum_probs=217.8
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC---------cccCcch----h---------------h
Q 009310 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER---------FVFKPML----Y---------------E 128 (538)
Q Consensus 77 ~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~---------~~~~p~~----~---------------~ 128 (538)
...+||+||||||||++||..|++ .|++|+|||+.+. ++..... + .
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~------~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~ 80 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVL------NGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHE 80 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHH------TTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHH------CCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHH
Confidence 345899999999999999999999 6789999994211 1111000 0 0
Q ss_pred h-hcCC-------CCCccccc-----------cHHHHhccCCcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcCCc-e
Q 009310 129 L-LSGE-------VDAWEIAP-----------RFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG-L 188 (538)
Q Consensus 129 ~-~~g~-------~~~~~~~~-----------~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g-~ 188 (538)
. ..|. .+...+.. .+...+...+++++.+.+..++.... .+.++++ .
T Consensus 81 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~~v-------------~v~~~~g~~ 147 (483)
T 3dgh_A 81 AAAYGWNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSHTL-------------LAKLKSGER 147 (483)
T ss_dssp HHHTTBCCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEE-------------EEECTTCCE
T ss_pred HHhcCcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEccCCEE-------------EEEeCCCeE
Confidence 0 0011 01111111 11223455789999888777765432 4556666 4
Q ss_pred EEEeeEEEEeCCCCCCCCCCCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHH
Q 009310 189 IVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLE 268 (538)
Q Consensus 189 ~~~yD~lVlAtG~~~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~ 268 (538)
.+.||+||||||+.|..|++||..++.+ +.++...+. ..+++++|||+|++|+|+|..+++.+.
T Consensus 148 ~~~~d~lviATGs~p~~p~i~G~~~~~~---~~~~~~~~~-------------~~~~~vvViGgG~~g~E~A~~l~~~g~ 211 (483)
T 3dgh_A 148 TITAQTFVIAVGGRPRYPDIPGAVEYGI---TSDDLFSLD-------------REPGKTLVVGAGYIGLECAGFLKGLGY 211 (483)
T ss_dssp EEEEEEEEECCCEEECCCSSTTHHHHCB---CHHHHTTCS-------------SCCCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred EEEcCEEEEeCCCCcCCCCCCCcccccC---cHHHHhhhh-------------hcCCcEEEECCCHHHHHHHHHHHHcCC
Confidence 7999999999999999999999855432 344433221 126899999999999999999998876
Q ss_pred hcCcEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEee
Q 009310 269 EKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILEL 348 (538)
Q Consensus 269 ~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 348 (538)
+ |+++++ ..+++.+++++.+.+.+.|++.||++++++.|.+++.+++ +.+.+.+
T Consensus 212 ~---Vtlv~~-~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~----------------------~~~~v~~ 265 (483)
T 3dgh_A 212 E---PTVMVR-SIVLRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQDD----------------------GKLLVKY 265 (483)
T ss_dssp E---EEEEES-SCSSTTSCHHHHHHHHHHHHHTTCCEEETEEEEEEEECTT----------------------SCEEEEE
T ss_pred E---EEEEeC-CCCCcccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC----------------------CcEEEEE
Confidence 6 999998 5788889999999999999999999999999999986431 2344443
Q ss_pred cccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCC
Q 009310 349 QPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLP 428 (538)
Q Consensus 349 ~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~ 428 (538)
.+... ++..++++|.||+|+|++|+++++... ..++++++ |+|.||+++|+ +.|+|||+|||+.. .|
T Consensus 266 ~~~~~-~~~~~~~~D~vi~a~G~~p~~~~l~l~---~~gl~~~~-G~i~vd~~~~t-~~~~IyA~GD~~~~-------~~ 332 (483)
T 3dgh_A 266 KNVET-GEESEDVYDTVLWAIGRKGLVDDLNLP---NAGVTVQK-DKIPVDSQEAT-NVANIYAVGDIIYG-------KP 332 (483)
T ss_dssp EETTT-CCEEEEEESEEEECSCEEECCGGGTGG---GTTCCCBT-TBBCCCTTCBC-SSTTEEECSTTBTT-------SC
T ss_pred ecCCC-CceeEEEcCEEEECcccccCcCcCCch---hcCccccC-CEEEECcCCcc-CCCCEEEEEcccCC-------CC
Confidence 32111 134579999999999999998876311 34688888 99999999998 99999999999842 26
Q ss_pred ccHHHHHHHHHHHHHHHHH
Q 009310 429 ATAQVAFQQADFAGWNLWA 447 (538)
Q Consensus 429 ~~~~~A~~qg~~aa~~i~~ 447 (538)
..+..|..||+.+|.||.+
T Consensus 333 ~~~~~A~~~g~~aa~~i~g 351 (483)
T 3dgh_A 333 ELTPVAVLAGRLLARRLYG 351 (483)
T ss_dssp CCHHHHHHHHHHHHHHHHS
T ss_pred ccHHHHHHHHHHHHHHHcC
Confidence 7899999999999999984
No 59
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=6.6e-35 Score=291.86 Aligned_cols=301 Identities=17% Similarity=0.171 Sum_probs=215.0
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC--cccCcchhhhhcC-CCCCccccccHHHHhccCCcEEEE
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER--FVFKPMLYELLSG-EVDAWEIAPRFADLLANTGVQFFK 156 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~--~~~~p~~~~~~~g-~~~~~~~~~~~~~~~~~~~v~~~~ 156 (538)
+||+|||||+||+++|..|++ .|++|+|||+..- +.....+..+... ......+...+.+.+++.+++++.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~------~g~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 75 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSAR------KGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVID 75 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHT------TTCCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEEC
T ss_pred CCEEEECcCHHHHHHHHHHHH------CCCcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEc
Confidence 689999999999999999998 6789999987421 1111111111110 111223444556667778999998
Q ss_pred e-eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCCCCCCccccCc-CCCChHHHHHHHHHHHHH
Q 009310 157 D-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAF-PFSTLEDACRVDRKLSEL 234 (538)
Q Consensus 157 ~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p~ipG~~~~~~-~~~~~~d~~~~~~~l~~~ 234 (538)
+ +|+.++.+... . ....+.++++..+.||+||+|||+.|..|++||..++.. .+..... .....
T Consensus 76 ~~~v~~i~~~~~~---~-----~~~~v~~~~g~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~--- 141 (310)
T 1fl2_A 76 SQSASKLIPAAVE---G-----GLHQIETASGAVLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPH---CDGPL--- 141 (310)
T ss_dssp SCCEEEEECCSST---T-----CCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHH---HHGGG---
T ss_pred cCEEEEEEecccC---C-----ceEEEEECCCCEEEeCEEEECcCCCcCCCCCCChhhcccceeEEecc---CcHhh---
Confidence 7 89999764320 0 012577777878999999999999998888999754311 1111111 11110
Q ss_pred HHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCCChhhHHHHHHHHHh-CCCEEEcCceeeE
Q 009310 235 ERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSA-RKVQLVLGYFVRC 313 (538)
Q Consensus 235 ~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~-~gV~v~~~~~V~~ 313 (538)
..+++|+|||+|++|+|+|..|++.+.+ |+++++.+.+. .+ ..+.+.|++ .||++++++.+++
T Consensus 142 -------~~~~~v~VvG~G~~g~e~A~~l~~~g~~---Vtlv~~~~~~~--~~----~~~~~~l~~~~gv~v~~~~~v~~ 205 (310)
T 1fl2_A 142 -------FKGKRVAVIGGGNSGVEAAIDLAGIVEH---VTLLEFAPEMK--AD----QVLQDKLRSLKNVDIILNAQTTE 205 (310)
T ss_dssp -------GBTCEEEEECCSHHHHHHHHHHHTTBSE---EEEECSSSSCC--SC----HHHHHHHHTCTTEEEESSEEEEE
T ss_pred -------cCCCEEEEECCCHHHHHHHHHHHHhCCE---EEEEEeCcccC--cc----HHHHHHHhhCCCeEEecCCceEE
Confidence 1168999999999999999999876655 99999988762 22 345566777 6999999999999
Q ss_pred EeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcCCC
Q 009310 314 IRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNAR 393 (538)
Q Consensus 314 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~ 393 (538)
+..+++.. .+++++.. . .++..++++|.||+|+|++|+++++.. .++++++
T Consensus 206 i~~~~~~v--------------------~~v~~~~~--~-~g~~~~i~~D~vi~a~G~~p~~~~l~~------~l~~~~~ 256 (310)
T 1fl2_A 206 VKGDGSKV--------------------VGLEYRDR--V-SGDIHNIELAGIFVQIGLLPNTNWLEG------AVERNRM 256 (310)
T ss_dssp EEESSSSE--------------------EEEEEEET--T-TCCEEEEECSEEEECSCEEESCGGGTT------TSCBCTT
T ss_pred EEcCCCcE--------------------EEEEEEEC--C-CCcEEEEEcCEEEEeeCCccCchHHhc------cccccCC
Confidence 98753100 13444311 0 112357999999999999999887753 2667888
Q ss_pred CCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHCCCC
Q 009310 394 GQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRP 453 (538)
Q Consensus 394 G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~~~~ 453 (538)
|+|.||+++|+ +.|+|||+|||+..+ ++.+..|+.||+.+|.||.+.+.++.
T Consensus 257 g~i~vd~~~~t-~~~~vya~GD~~~~~-------~~~~~~A~~~g~~aa~~i~~~l~~~~ 308 (310)
T 1fl2_A 257 GEIIIDAKCET-NVKGVFAAGDCTTVP-------YKQIIIATGEGAKASLSAFDYLIRTK 308 (310)
T ss_dssp SCBCCCTTCBC-SSTTEEECSTTBSCS-------SCCHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred CcEEcCCCCcc-CCCCEEEeecccCCc-------chhhhhhHhhHHHHHHHHHHHHHHhc
Confidence 99999999997 999999999999851 36889999999999999999987654
No 60
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=1.1e-35 Score=316.01 Aligned_cols=287 Identities=17% Similarity=0.220 Sum_probs=219.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcch----h---------------hhh-cCC-----
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPML----Y---------------ELL-SGE----- 133 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~----~---------------~~~-~g~----- 133 (538)
.+||+|||||+||++||..|++ .|++|+|||++. ++..... + ... .|.
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~------~G~~V~liEk~~-~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~ 98 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGA------LGKRVAIAEEYR-IGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADP 98 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCC
T ss_pred CCCEEEECcCHHHHHHHHHHHh------CcCEEEEEeCCC-CCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence 4799999999999999999999 678999999943 2221000 0 000 000
Q ss_pred -CCCc-----------cccccHHHHhccCCcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcC-CceEEEeeEEEEeCC
Q 009310 134 -VDAW-----------EIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLE-SGLIVEYDWLVLSLG 200 (538)
Q Consensus 134 -~~~~-----------~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~-~g~~~~yD~lVlAtG 200 (538)
.+.. .+...+...+...+++++.+.+..++.. .+.+. ++..+.||+||+|||
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~---------------~v~v~~~~~~~~~d~lviAtG 163 (484)
T 3o0h_A 99 IFNWEKLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDEH---------------TLELSVTGERISAEKILIATG 163 (484)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETT---------------EEEETTTCCEEEEEEEEECCC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCC---------------EEEEecCCeEEEeCEEEEccC
Confidence 0000 1112233445567899999988887642 35554 667899999999999
Q ss_pred CCCC-CCCCCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecC
Q 009310 201 AEPK-LDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVE 279 (538)
Q Consensus 201 ~~~~-~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~ 279 (538)
+.|. .|++||.. ..+ +.++...+.. .+++++|||+|++|+|+|..+.+.+.+ |+++++.
T Consensus 164 ~~p~~~p~i~G~~-~~~---~~~~~~~~~~-------------~~~~v~ViGgG~~g~e~A~~l~~~g~~---Vtli~~~ 223 (484)
T 3o0h_A 164 AKIVSNSAIKGSD-LCL---TSNEIFDLEK-------------LPKSIVIVGGGYIGVEFANIFHGLGVK---TTLLHRG 223 (484)
T ss_dssp EEECCC--CBTGG-GSB---CTTTGGGCSS-------------CCSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSS
T ss_pred CCcccCCCCCCcc-ccc---cHHHHHhHHh-------------cCCcEEEECcCHHHHHHHHHHHHcCCe---EEEEECC
Confidence 9998 89999974 222 2222222211 168999999999999999999887665 9999999
Q ss_pred CccCCCCChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceE
Q 009310 280 TTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQI 359 (538)
Q Consensus 280 ~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~ 359 (538)
+.+++.+++.+.+.+.+.+++.||++++++.|++++.++ +++.+.+. +|++
T Consensus 224 ~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~-----------------------~~v~v~~~------~g~~ 274 (484)
T 3o0h_A 224 DLILRNFDYDLRQLLNDAMVAKGISIIYEATVSQVQSTE-----------------------NCYNVVLT------NGQT 274 (484)
T ss_dssp SSSSTTSCHHHHHHHHHHHHHHTCEEESSCCEEEEEECS-----------------------SSEEEEET------TSCE
T ss_pred CccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeC-----------------------CEEEEEEC------CCcE
Confidence 999999999999999999999999999999999998754 44555543 6678
Q ss_pred EeccEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHH
Q 009310 360 FEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQAD 439 (538)
Q Consensus 360 l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~ 439 (538)
+++|.||+|+|++|+++++.. ...+++++++|+|.||+++|+ +.|+|||+|||+.. ++.+..|..||+
T Consensus 275 i~aD~Vi~A~G~~p~~~~l~l---~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~--------~~~~~~A~~~g~ 342 (484)
T 3o0h_A 275 ICADRVMLATGRVPNTTGLGL---ERAGVKVNEFGAVVVDEKMTT-NVSHIWAVGDVTGH--------IQLTPVAIHDAM 342 (484)
T ss_dssp EEESEEEECCCEEECCTTCCH---HHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGGTS--------CCCHHHHHHHHH
T ss_pred EEcCEEEEeeCCCcCCCCCCh---hhcCceECCCCCEeECCCCCC-CCCCEEEEEecCCC--------CcCHHHHHHHHH
Confidence 999999999999999876431 134688899999999999998 99999999999985 788999999999
Q ss_pred HHHHHHHHH
Q 009310 440 FAGWNLWAA 448 (538)
Q Consensus 440 ~aa~~i~~~ 448 (538)
.+|.||...
T Consensus 343 ~aa~~i~~~ 351 (484)
T 3o0h_A 343 CFVKNAFEN 351 (484)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHcCC
Confidence 999999853
No 61
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=2.8e-35 Score=312.55 Aligned_cols=294 Identities=19% Similarity=0.262 Sum_probs=218.4
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC-------------c---ch-----hhhh----c-
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-------------P---ML-----YELL----S- 131 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~-------------p---~~-----~~~~----~- 131 (538)
+.+||+|||||+||++||..|++ .|++|+|||+++..... | ++ .... .
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~------~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~ 75 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQ------LGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKL 75 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHH------HTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHh------CCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35899999999999999999999 57899999998621111 0 00 0000 0
Q ss_pred -CCC------CCcc-----------ccccHHHHhccCCcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcCCc--eEEE
Q 009310 132 -GEV------DAWE-----------IAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG--LIVE 191 (538)
Q Consensus 132 -g~~------~~~~-----------~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g--~~~~ 191 (538)
|.. +... +...+..+++..+++++.+.+..++.... .+...++ ..+.
T Consensus 76 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~-------------~v~~~~g~~~~~~ 142 (476)
T 3lad_A 76 HGISTGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAGKKV-------------EVTAADGSSQVLD 142 (476)
T ss_dssp GTEECSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEECSTTCE-------------EEECTTSCEEEEC
T ss_pred cCcccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEE-------------EEEcCCCceEEEE
Confidence 000 0000 00112233445689999988777765432 4666666 5799
Q ss_pred eeEEEEeCCCCCCCCCCCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcC
Q 009310 192 YDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKG 271 (538)
Q Consensus 192 yD~lVlAtG~~~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~ 271 (538)
||+||+|||+.|..|+.++.... .+.+..+...+. ..+++|+|||+|++|+|+|..+.+.+.+
T Consensus 143 ~d~lvlAtG~~p~~~~~~~~~~~--~v~~~~~~~~~~-------------~~~~~v~ViGgG~~g~e~A~~l~~~g~~-- 205 (476)
T 3lad_A 143 TENVILASGSKPVEIPPAPVDQD--VIVDSTGALDFQ-------------NVPGKLGVIGAGVIGLELGSVWARLGAE-- 205 (476)
T ss_dssp CSCEEECCCEEECCCTTSCCCSS--SEEEHHHHTSCS-------------SCCSEEEEECCSHHHHHHHHHHHHTTCE--
T ss_pred cCEEEEcCCCCCCCCCCCCCCcc--cEEechhhhccc-------------cCCCeEEEECCCHHHHHHHHHHHHcCCc--
Confidence 99999999999886655543211 122333322211 1268999999999999999999887766
Q ss_pred cEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeeccc
Q 009310 272 IVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPA 351 (538)
Q Consensus 272 ~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 351 (538)
|+++++.+++++.+++.+.+.+.+.|++.||++++++.|++++.++ +.+.+.+.
T Consensus 206 -Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~-----------------------~~~~v~~~-- 259 (476)
T 3lad_A 206 -VTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKILLGARVTGTEVKN-----------------------KQVTVKFV-- 259 (476)
T ss_dssp -EEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCEEEEEEECS-----------------------SCEEEEEE--
T ss_pred -EEEEecCCCcCcccCHHHHHHHHHHHHhCCCEEEECCEEEEEEEcC-----------------------CEEEEEEE--
Confidence 9999999999999999999999999999999999999999998754 34444443
Q ss_pred ccCCcc-eEEeccEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCcc
Q 009310 352 IKGLES-QIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPAT 430 (538)
Q Consensus 352 ~~~~~g-~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~ 430 (538)
.+ ++ +++++|.||+|+|++|+++++... ..+++++++|+|.||+++|+ +.|+|||+|||+.. |..
T Consensus 260 -~~-~g~~~~~~D~vi~a~G~~p~~~~l~~~---~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~--------~~~ 325 (476)
T 3lad_A 260 -DA-EGEKSQAFDKLIVAVGRRPVTTDLLAA---DSGVTLDERGFIYVDDYCAT-SVPGVYAIGDVVRG--------AML 325 (476)
T ss_dssp -SS-SEEEEEEESEEEECSCEEECCTTCCSS---CCSCCBCTTSCBCCCTTSBC-SSTTEEECGGGSSS--------CCC
T ss_pred -eC-CCcEEEECCEEEEeeCCcccCCCCCcc---ccCccccCCCCEeeCCCccc-CCCCEEEEEccCCC--------ccc
Confidence 11 23 689999999999999998754211 33688899999999999998 99999999999965 678
Q ss_pred HHHHHHHHHHHHHHHHH
Q 009310 431 AQVAFQQADFAGWNLWA 447 (538)
Q Consensus 431 ~~~A~~qg~~aa~~i~~ 447 (538)
+..|..||+.+|.||..
T Consensus 326 ~~~A~~~g~~aa~~i~g 342 (476)
T 3lad_A 326 AHKASEEGVVVAERIAG 342 (476)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 99999999999999985
No 62
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=6.3e-35 Score=293.41 Aligned_cols=298 Identities=19% Similarity=0.151 Sum_probs=212.9
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhh---hhcC--CCCCccccccHHHHhccCCc
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYE---LLSG--EVDAWEIAPRFADLLANTGV 152 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~---~~~g--~~~~~~~~~~~~~~~~~~~v 152 (538)
+.+||+|||||+||+++|..|++ .|++|+|||+... ........ ...+ .....++...+.+.+.+.++
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~------~g~~v~lie~~~~-gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 87 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAAR------SGFSVAILDKAVA-GGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAK 87 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSST-TGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSE
T ss_pred CCCcEEEECcCHHHHHHHHHHHh------CCCcEEEEeCCCC-CccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCC
Confidence 35799999999999999999998 6789999999532 11111000 0011 11222334445566667789
Q ss_pred EEEEeeEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCCCCCCccccCc-CCCChHHHHHHHHHH
Q 009310 153 QFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAF-PFSTLEDACRVDRKL 231 (538)
Q Consensus 153 ~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p~ipG~~~~~~-~~~~~~d~~~~~~~l 231 (538)
+++.++++.++...+. ..+.+ ++..+.||+||+|||+.|..|++||..++.. .+....... ...
T Consensus 88 ~~~~~~v~~i~~~~~~-----------~~v~~-~~~~~~~~~li~AtG~~~~~~~i~g~~~~~~~~~~~~~~~~---~~~ 152 (319)
T 3cty_A 88 IREGVEVRSIKKTQGG-----------FDIET-NDDTYHAKYVIITTGTTHKHLGVKGESEYFGKGTSYCSTCD---GYL 152 (319)
T ss_dssp EEETCCEEEEEEETTE-----------EEEEE-SSSEEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHHH---GGG
T ss_pred EEEEeeEEEEEEeCCE-----------EEEEE-CCCEEEeCEEEECCCCCcccCCCCChHHhCCceEEEEEecc---hhh
Confidence 9888888888754331 13555 4458999999999999999999998744211 111111110 000
Q ss_pred HHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEEcCcee
Q 009310 232 SELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFV 311 (538)
Q Consensus 232 ~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V 311 (538)
..+++|+|||+|++|+|+|..|.+.+.+ |+++++.+.+.. . ..+.+.+++.||++++++.+
T Consensus 153 ----------~~~~~v~viG~G~~g~e~a~~l~~~g~~---V~~i~~~~~~~~--~----~~l~~~l~~~gv~i~~~~~v 213 (319)
T 3cty_A 153 ----------FKGKRVVTIGGGNSGAIAAISMSEYVKN---VTIIEYMPKYMC--E----NAYVQEIKKRNIPYIMNAQV 213 (319)
T ss_dssp ----------GBTSEEEEECCSHHHHHHHHHHTTTBSE---EEEECSSSSCCS--C----HHHHHHHHHTTCCEECSEEE
T ss_pred ----------cCCCeEEEECCCHHHHHHHHHHHhhCCc---EEEEEcCCccCC--C----HHHHHHHhcCCcEEEcCCeE
Confidence 1157999999999999999999877655 999999876532 2 33556677899999999999
Q ss_pred eEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcC
Q 009310 312 RCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLN 391 (538)
Q Consensus 312 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~ 391 (538)
+++..+++.. .+++++.. .+++..++++|.||+|+|++|+.+++... +++++
T Consensus 214 ~~i~~~~~~v--------------------~~v~~~~~---~~g~~~~i~~D~vi~a~G~~p~~~~l~~~-----gl~~~ 265 (319)
T 3cty_A 214 TEIVGDGKKV--------------------TGVKYKDR---TTGEEKLIETDGVFIYVGLIPQTSFLKDS-----GVKLD 265 (319)
T ss_dssp EEEEESSSSE--------------------EEEEEEET---TTCCEEEECCSEEEECCCEEECCGGGTTS-----CCCBC
T ss_pred EEEecCCceE--------------------EEEEEEEc---CCCceEEEecCEEEEeeCCccChHHHhhc-----ccccc
Confidence 9998753100 23444311 01123479999999999999998888643 57788
Q ss_pred CCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHCCC
Q 009310 392 ARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDR 452 (538)
Q Consensus 392 ~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~~~ 452 (538)
++|+|.||+++|+ +.|+|||+|||+..+ ++.+..|+.||+.+|.||.+.+.++
T Consensus 266 ~~g~i~vd~~~~t-~~~~vya~GD~~~~~-------~~~~~~A~~~g~~aa~~i~~~l~~~ 318 (319)
T 3cty_A 266 ERGYIVVDSRQRT-SVPGVYAAGDVTSGN-------FAQIASAVGDGCKAALSLYSDSISK 318 (319)
T ss_dssp TTSCBCCCTTCBC-SSTTEEECSTTBTTC-------CCCHHHHHHHHHHHHHHHHHHHTC-
T ss_pred CCccEeCCCCCcc-CCCCEEEeecccCcc-------hhhHHHHHHHHHHHHHHHHHHhhcc
Confidence 8999999999998 899999999999851 4789999999999999999999765
No 63
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=6.5e-35 Score=292.04 Aligned_cols=300 Identities=17% Similarity=0.153 Sum_probs=213.9
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCC-EEEEEcCCCCcccCcc----hhhhh--cCCCCCccccccHHHHhccCCc
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSERFVFKPM----LYELL--SGEVDAWEIAPRFADLLANTGV 152 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~~~~~~~p~----~~~~~--~g~~~~~~~~~~~~~~~~~~~v 152 (538)
++|+|||||+||+++|..|++ .|+ +|+|||++.. ..... ...+. ........+...+.+.+.+.++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~------~g~~~v~lie~~~~-gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v 74 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATR------GGVKNAVLFEKGMP-GGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGL 74 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHH------TTCSSEEEECSSST-TCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSC
T ss_pred ceEEEECccHHHHHHHHHHHH------CCCCcEEEEcCCCC-CcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCC
Confidence 689999999999999999998 688 9999999632 11110 00000 1112223444455666677789
Q ss_pred EEEEeeEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCCCCCCccccCc-CCCChHHHHHHHHHH
Q 009310 153 QFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAF-PFSTLEDACRVDRKL 231 (538)
Q Consensus 153 ~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p~ipG~~~~~~-~~~~~~d~~~~~~~l 231 (538)
+++.++|+.++.+.+. ..+.+.++..+.||+||+|||+.|..|++||..++.. .+....... ...
T Consensus 75 ~~~~~~v~~i~~~~~~-----------~~v~~~~g~~~~~~~vv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~ 140 (311)
T 2q0l_A 75 KHEMTAVQRVSKKDSH-----------FVILAEDGKTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCD---GFF 140 (311)
T ss_dssp EEECSCEEEEEEETTE-----------EEEEETTSCEEEEEEEEECCCEEECCCCCBTHHHHBTTTEESCHHHH---GGG
T ss_pred EEEEEEEEEEEEcCCE-----------EEEEEcCCCEEECCEEEECCCCCCCCCCCCChhhccCCcEEEeecCC---hhh
Confidence 9888888888754431 1465667778999999999999999999999754210 111111111 100
Q ss_pred HHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCCChhhHHHHHHHHH-hCCCEEEcCce
Q 009310 232 SELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLS-ARKVQLVLGYF 310 (538)
Q Consensus 232 ~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~-~~gV~v~~~~~ 310 (538)
..+++|+|||+|.+|+|+|..|.+.+.+ |+++++.+.+. ..+ .+.+.+. +.||++++++.
T Consensus 141 ----------~~~~~v~VvG~G~~g~e~A~~l~~~g~~---Vtlv~~~~~~~--~~~----~~~~~l~~~~gv~v~~~~~ 201 (311)
T 2q0l_A 141 ----------YKNKEVAVLGGGDTAVEEAIYLANICKK---VYLIHRRDGFR--CAP----ITLEHAKNNDKIEFLTPYV 201 (311)
T ss_dssp ----------GTTSEEEEECCSHHHHHHHHHHHTTSSE---EEEECSSSSCC--SCH----HHHHHHHTCTTEEEETTEE
T ss_pred ----------cCCCEEEEECCCHHHHHHHHHHHhcCCE---EEEEeeCCccC--CCH----HHHHHHhhCCCeEEEeCCE
Confidence 1157999999999999999999877655 99999987763 222 2344554 57999999999
Q ss_pred eeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCc
Q 009310 311 VRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPL 390 (538)
Q Consensus 311 V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l 390 (538)
++++..+++.. ..++++.. .+++..++++|.||+|+|++|+++++...+. ..++++
T Consensus 202 v~~i~~~~~~v--------------------~~v~~~~~---~~g~~~~i~~D~vi~a~G~~p~~~~l~~~g~-~~~l~~ 257 (311)
T 2q0l_A 202 VEEIKGDASGV--------------------SSLSIKNT---ATNEKRELVVPGFFIFVGYDVNNAVLKQEDN-SMLCKC 257 (311)
T ss_dssp EEEEEEETTEE--------------------EEEEEEET---TTCCEEEEECSEEEECSCEEECCGGGBCTTS-CBSSCB
T ss_pred EEEEECCCCcE--------------------eEEEEEec---CCCceEEEecCEEEEEecCccChhhhhcccc-cceeEe
Confidence 99998753100 13444421 0112347999999999999999888865421 124678
Q ss_pred CCCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHCC
Q 009310 391 NARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIND 451 (538)
Q Consensus 391 ~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~~ 451 (538)
+++|+|.||+++|+ +.|+|||+|||+.. .++++..|+.||+.+|.||.+.+.+
T Consensus 258 ~~~g~i~vd~~~~t-~~~~vya~GD~~~~-------~~~~~~~A~~~g~~aa~~i~~~l~~ 310 (311)
T 2q0l_A 258 DEYGSIVVDFSMKT-NVQGLFAAGDIRIF-------APKQVVCAASDGATAALSVISYLEH 310 (311)
T ss_dssp CTTSCBCCCTTCBC-SSTTEEECSTTBTT-------CCCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccCCCEEeCCcccc-CCCCeEEcccccCc-------chHHHHHHHHhHHHHHHHHHHHHhh
Confidence 88999999999998 99999999999985 1578999999999999999988764
No 64
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=6.8e-35 Score=298.27 Aligned_cols=307 Identities=16% Similarity=0.151 Sum_probs=219.2
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcc--hhh----hhcCC--CCCccccccHHHHhcc
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM--LYE----LLSGE--VDAWEIAPRFADLLAN 149 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~--~~~----~~~g~--~~~~~~~~~~~~~~~~ 149 (538)
..+||+|||||+||+++|..|++ .|++|+|||+++.+..... .+. ...+. ....++...+.+.+..
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~------~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 86 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGM------NNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAER 86 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHT
T ss_pred CCCCEEEECCCHHHHHHHHHHHh------CCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHH
Confidence 35799999999999999999998 6889999999876532211 000 00011 1123334445566667
Q ss_pred CCcEEEEe-eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCC---CCCCCCCCC-ccccC-----cCCC
Q 009310 150 TGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGA---EPKLDVVPG-AAEFA-----FPFS 219 (538)
Q Consensus 150 ~~v~~~~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~---~~~~p~ipG-~~~~~-----~~~~ 219 (538)
.+++++.+ +|+.++..... ...+.++++..+.||+||+|||+ .|..+++|| .+++. +.+.
T Consensus 87 ~~~~~~~~~~v~~i~~~~~~----------~~~v~~~~g~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~~~ 156 (360)
T 3ab1_A 87 YNPDVVLNETVTKYTKLDDG----------TFETRTNTGNVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYAVK 156 (360)
T ss_dssp TCCEEECSCCEEEEEECTTS----------CEEEEETTSCEEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESSCS
T ss_pred hCCEEEcCCEEEEEEECCCc----------eEEEEECCCcEEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEecC
Confidence 78888764 88888765320 12577778888999999999999 566677777 54321 1112
Q ss_pred ChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCCChhhHHHHHHHHH
Q 009310 220 TLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLS 299 (538)
Q Consensus 220 ~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~ 299 (538)
...+ + .+++|+|||+|.+|+|+|..|.+.+.+ |+++++.+.+.+. +...+.+.+.++
T Consensus 157 ~~~~---~---------------~~~~vvVvG~G~~g~e~A~~l~~~g~~---V~lv~~~~~~~~~--~~~~~~l~~~~~ 213 (360)
T 3ab1_A 157 SVED---F---------------KGKRVVIVGGGDSALDWTVGLIKNAAS---VTLVHRGHEFQGH--GKTAHEVERARA 213 (360)
T ss_dssp CGGG---G---------------TTCEEEEECSSHHHHHHHHHTTTTSSE---EEEECSSSSCSSC--SHHHHSSHHHHH
T ss_pred CHHH---c---------------CCCcEEEECCCHHHHHHHHHHHhcCCE---EEEEEcCCCCCCC--HHHHHHHHHHhh
Confidence 2111 0 167999999999999999999876554 9999998876543 456667778888
Q ss_pred hCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCC
Q 009310 300 ARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVE 379 (538)
Q Consensus 300 ~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~ 379 (538)
+.||++++++.|.++..+++.. ..|+++.. .++.+.+++|.||+|+|++|+.+++.
T Consensus 214 ~~gv~i~~~~~v~~i~~~~~~v--------------------~~v~~~~~----~g~~~~i~~D~vi~a~G~~p~~~~l~ 269 (360)
T 3ab1_A 214 NGTIDVYLETEVASIEESNGVL--------------------TRVHLRSS----DGSKWTVEADRLLILIGFKSNLGPLA 269 (360)
T ss_dssp HTSEEEESSEEEEEEEEETTEE--------------------EEEEEEET----TCCEEEEECSEEEECCCBCCSCGGGG
T ss_pred cCceEEEcCcCHHHhccCCCce--------------------EEEEEEec----CCCeEEEeCCEEEECCCCCCCHHHHH
Confidence 9999999999999998753110 14444311 11236899999999999999988776
Q ss_pred CCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHCCCCCCCcee
Q 009310 380 PPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLLPFRF 459 (538)
Q Consensus 380 ~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~~~~~~p~~~ 459 (538)
.. +++++ +|+|.||+++|+ +.|+|||+|||+..+. .++++..|+.||+.+|.||.+.+.+++..|+.|
T Consensus 270 ~~-----~~~~~-~g~i~vd~~~~t-~~~~vya~GD~~~~~~-----~~~~~~~A~~~g~~aa~~i~~~l~~~~~~~~~~ 337 (360)
T 3ab1_A 270 RW-----DLELY-ENALVVDSHMKT-SVDGLYAAGDIAYYPG-----KLKIIQTGLSEATMAVRHSLSYIKPGEKIRNVF 337 (360)
T ss_dssp GS-----SCCEE-TTEEECCTTSBC-SSTTEEECSTTEECTT-----CCCSHHHHHHHHHHHHHHHHHHHSCC-------
T ss_pred hh-----ccccc-cCeeeecCCCcC-CCCCEEEecCccCCCC-----ccceeehhHHHHHHHHHHHHhhcCCccccCcee
Confidence 43 46666 789999999998 8999999999998632 267899999999999999999998876655444
No 65
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=4.9e-35 Score=295.23 Aligned_cols=298 Identities=18% Similarity=0.198 Sum_probs=220.9
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcc--hh----hhhcCC--CCCccccccHHHHhccC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM--LY----ELLSGE--VDAWEIAPRFADLLANT 150 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~--~~----~~~~g~--~~~~~~~~~~~~~~~~~ 150 (538)
.++|+|||||+|||++|..|++ .|++|+|||+++.+..... .+ ....+. ....++...+.+.+.+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~------~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGM------RQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKF 80 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTS
T ss_pred cceEEEECCCHHHHHHHHHHHH------CCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHh
Confidence 4799999999999999999998 6889999999886442211 00 001111 12344555666777778
Q ss_pred CcEEEE-eeEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCC---CCCCCCCCCccccC---cCCCChHH
Q 009310 151 GVQFFK-DRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGA---EPKLDVVPGAAEFA---FPFSTLED 223 (538)
Q Consensus 151 ~v~~~~-~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~---~~~~p~ipG~~~~~---~~~~~~~d 223 (538)
+++++. .+|+.++...+- ...+.+++++ +.||+||+|||+ .|..|++||...+. ... ...+
T Consensus 81 ~~~~~~~~~v~~i~~~~~~----------~~~v~~~~g~-~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~~~~-~~~~ 148 (332)
T 3lzw_A 81 DQTICLEQAVESVEKQADG----------VFKLVTNEET-HYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHY-FVDD 148 (332)
T ss_dssp CCEEECSCCEEEEEECTTS----------CEEEEESSEE-EEEEEEEECCTTSCCEECCCCCTTGGGGBTTTEES-SCSC
T ss_pred CCcEEccCEEEEEEECCCC----------cEEEEECCCE-EEeCEEEECCCCCcCCCCCCCCCChhhccCceEEE-ecCC
Confidence 899886 689999776430 1257777775 999999999999 88889999976521 111 1111
Q ss_pred HHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCCChhhHHHHHHHHHhCCC
Q 009310 224 ACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKV 303 (538)
Q Consensus 224 ~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV 303 (538)
...+ .+++|+|||+|.+|+|+|..|.+.+.+ |+++++.+.+.+. +...+.|++.||
T Consensus 149 ~~~~---------------~~~~v~vvG~g~~~~e~a~~l~~~~~~---v~~~~~~~~~~~~------~~~~~~l~~~gv 204 (332)
T 3lzw_A 149 LQKF---------------AGRRVAILGGGDSAVDWALMLEPIAKE---VSIIHRRDKFRAH------EHSVENLHASKV 204 (332)
T ss_dssp GGGG---------------BTCEEEEECSSHHHHHHHHHHTTTBSE---EEEECSSSSCSSC------HHHHHHHHHSSC
T ss_pred HHHc---------------CCCEEEEECCCHhHHHHHHHHHhhCCe---EEEEEecCcCCcc------HHHHHHHhcCCe
Confidence 1111 157999999999999999999876554 9999998876332 223455889999
Q ss_pred EEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCC
Q 009310 304 QLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNN 383 (538)
Q Consensus 304 ~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~ 383 (538)
++++++.+.++..+++. ..++++. . .+++++++++|.||+|+|++|+.+++...
T Consensus 205 ~~~~~~~v~~i~~~~~~---------------------~~v~~~~--~-~~g~~~~~~~D~vv~a~G~~p~~~~~~~~-- 258 (332)
T 3lzw_A 205 NVLTPFVPAELIGEDKI---------------------EQLVLEE--V-KGDRKEILEIDDLIVNYGFVSSLGPIKNW-- 258 (332)
T ss_dssp EEETTEEEEEEECSSSC---------------------CEEEEEE--T-TSCCEEEEECSEEEECCCEECCCGGGGGS--
T ss_pred EEEeCceeeEEecCCce---------------------EEEEEEe--c-CCCceEEEECCEEEEeeccCCCchHHhhc--
Confidence 99999999999875421 2344441 1 11246789999999999999998887643
Q ss_pred ccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHCCCCC
Q 009310 384 RLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPL 454 (538)
Q Consensus 384 ~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~~~~~ 454 (538)
++++ ++|+|.||+++|+ +.|+|||+|||+..+. .++++..|+.||+.+|.||.+.+.+++.
T Consensus 259 ---~~~~-~~g~i~vd~~~~t-~~~~vya~GD~~~~~~-----~~~~~~~A~~~g~~aa~~i~~~l~~~~~ 319 (332)
T 3lzw_A 259 ---GLDI-EKNSIVVKSTMET-NIEGFFAAGDICTYEG-----KVNLIASGFGEAPTAVNNAKAYMDPKAR 319 (332)
T ss_dssp ---SCCE-ETTEEECCTTSBC-SSTTEEECGGGEECTT-----CCCCHHHHHHHHHHHHHHHHHHHCTTSC
T ss_pred ---Cccc-cCCeEEeCCCCce-ecCCEEEccceecCCC-----CcceEeeehhhHHHHHHHHHHhhChhhc
Confidence 4666 6799999999998 9999999999997521 2789999999999999999999987643
No 66
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=5.4e-35 Score=293.78 Aligned_cols=301 Identities=16% Similarity=0.108 Sum_probs=217.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhh---hhcC---CCCCccccccHHHHhccCCc
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYE---LLSG---EVDAWEIAPRFADLLANTGV 152 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~---~~~g---~~~~~~~~~~~~~~~~~~~v 152 (538)
.+||+|||||+||+++|..|++ .|++|+|||+... ........ ...+ .....++...+...+...++
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~------~g~~v~lie~~~~-gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAAR------ANLQPVLITGMEK-GGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFET 77 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT------TTCCCEEECCSST-TGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTC
T ss_pred cCCEEEECcCHHHHHHHHHHHH------CCCcEEEEccCCC-CceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCC
Confidence 4799999999999999999998 6789999997531 11100000 0011 11223334445566667889
Q ss_pred EEEEeeEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCCCCCCccccCc-CCCChHHHHHHHHHH
Q 009310 153 QFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAF-PFSTLEDACRVDRKL 231 (538)
Q Consensus 153 ~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p~ipG~~~~~~-~~~~~~d~~~~~~~l 231 (538)
+++.++++.++...+. ..+ +.++..+.||+||+|||+.|..|++||..++.. .+..... ....+
T Consensus 78 ~~~~~~v~~i~~~~~~-----------~~v-~~~~~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~ 142 (320)
T 1trb_A 78 EIIFDHINKVDLQNRP-----------FRL-NGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACAT---SDGFF 142 (320)
T ss_dssp EEECCCEEEEECSSSS-----------EEE-EESSCEEEEEEEEECCCEEECCCCCHHHHHTBTTTEESCHH---HHGGG
T ss_pred EEEEeeeeEEEecCCE-----------EEE-EeCCCEEEcCEEEECCCCCcCCCCCCChHHhCCceeEeccc---CCccc
Confidence 9998889999765432 134 456678999999999999999888988653211 1111111 11111
Q ss_pred HHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEEcCcee
Q 009310 232 SELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFV 311 (538)
Q Consensus 232 ~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V 311 (538)
..+++|+|||+|.+|+|+|..|.+.+.+ |+++++.+.+. .++.+.+.+.+.+++.||++++++.|
T Consensus 143 ----------~~~~~v~ViG~G~~g~e~A~~l~~~g~~---Vtlv~~~~~~~--~~~~~~~~l~~~l~~~gv~i~~~~~v 207 (320)
T 1trb_A 143 ----------YRNQKVAVIGGGNTAVEEALYLSNIASE---VHLIHRRDGFR--AEKILIKRLMDKVENGNIILHTNRTL 207 (320)
T ss_dssp ----------GTTSEEEEECSSHHHHHHHHHHTTTSSE---EEEECSSSSCC--CCHHHHHHHHHHHHTSSEEEECSCEE
T ss_pred ----------cCCCeEEEECCCHHHHHHHHHHHhcCCe---EEEEEeCCccc--cCHHHHHHHHHhcccCCeEEEcCcee
Confidence 1167999999999999999999877655 99999987764 35677778888899999999999999
Q ss_pred eEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcC
Q 009310 312 RCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLN 391 (538)
Q Consensus 312 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~ 391 (538)
+++..+++.. .+++++.. ...++++++++|.||+|+|++|+.+++.. +++++
T Consensus 208 ~~i~~~~~~v--------------------~~v~~~~~--~~~g~~~~i~~D~vv~a~G~~p~~~~~~~------~l~~~ 259 (320)
T 1trb_A 208 EEVTGDQMGV--------------------TGVRLRDT--QNSDNIESLDVAGLFVAIGHSPNTAIFEG------QLELE 259 (320)
T ss_dssp EEEEECSSSE--------------------EEEEEECC--TTCCCCEEEECSEEEECSCEEESCGGGTT------TSCEE
T ss_pred EEEEcCCCce--------------------EEEEEEec--cCCCceEEEEcCEEEEEeCCCCChHHhcc------ccccc
Confidence 9998754110 23444410 01023478999999999999999887752 46777
Q ss_pred CCCCeeeCCCc-----ccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHCCCC
Q 009310 392 ARGQAETDETL-----CVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRP 453 (538)
Q Consensus 392 ~~G~i~vd~~l-----~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~~~~ 453 (538)
+|+|.||+++ ++ +.|+||++|||+..+ ++.+..|+.||+.+|.+|...+.+++
T Consensus 260 -~G~i~vd~~~~~~~~~t-~~~~vya~GD~~~~~-------~~~~~~A~~~g~~aa~~i~~~l~~~~ 317 (320)
T 1trb_A 260 -NGYIKVQSGIHGNATQT-SIPGVFAAGDVMDHI-------YRQAITSAGTGCMAALDAERYLDGLA 317 (320)
T ss_dssp -TTEECCCCSSSSCTTBC-SSTTEEECGGGGCSS-------SCCHHHHHHHHHHHHHHHHHHHTC--
T ss_pred -CceEEECCCcccccccC-CCCCEEEcccccCCc-------chhhhhhhccHHHHHHHHHHHHHhcc
Confidence 8999999987 55 899999999999851 57899999999999999999998753
No 67
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.4e-35 Score=296.07 Aligned_cols=299 Identities=14% Similarity=0.125 Sum_probs=214.0
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCc---ccCcchhhh--hcCCCCCccccccHHHHhccCC
Q 009310 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF---VFKPMLYEL--LSGEVDAWEIAPRFADLLANTG 151 (538)
Q Consensus 77 ~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~---~~~p~~~~~--~~g~~~~~~~~~~~~~~~~~~~ 151 (538)
.+.++|+|||||+||+++|..|++ .|++|+|||+...- .+....... ........++...+.+.+.+.+
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~------~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 85 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAAR------AQLAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFG 85 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHH------TTCCCEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTT
T ss_pred CCcCCEEEECCCHHHHHHHHHHHh------CCCeEEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 455899999999999999999998 67899999975211 010000000 0001122334445556666788
Q ss_pred cEEEEeeEEEEcCCCCcCcCCCceeecccEE-EcCCceEEEeeEEEEeCCCCCCCCCCCCccccC-cCCCChHHHHHHHH
Q 009310 152 VQFFKDRVKLLCPSDHLGVNGPMACTHGGTV-LLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFA-FPFSTLEDACRVDR 229 (538)
Q Consensus 152 v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v-~~~~g~~~~yD~lVlAtG~~~~~p~ipG~~~~~-~~~~~~~d~~~~~~ 229 (538)
++++.+.++.++....+ ++ .++++..+.||+||+|||+.|..|++||..++. ..+...... ..
T Consensus 86 v~~~~~~v~~i~~~~~~------------~v~~~~~g~~~~~d~lviAtG~~~~~~~i~g~~~~~~~~~~~~~~~---~~ 150 (335)
T 2a87_A 86 ADLRMEDVESVSLHGPL------------KSVVTADGQTHRARAVILAMGAAARYLQVPGEQELLGRGVSSCATC---DG 150 (335)
T ss_dssp CEEECCCEEEEECSSSS------------EEEEETTSCEEEEEEEEECCCEEECCCCCTHHHHTBTTTEESCHHH---HG
T ss_pred CEEEEeeEEEEEeCCcE------------EEEEeCCCCEEEeCEEEECCCCCccCCCCCchHhccCCceEEeecc---ch
Confidence 99998888888762222 56 667777899999999999999999999875421 111111111 11
Q ss_pred HHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEEcCc
Q 009310 230 KLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGY 309 (538)
Q Consensus 230 ~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~ 309 (538)
.+ ..+++|+|||+|.+|+|+|..|.+.+.+ |+++++.+.+.. ...+ ..+.+++.||++++++
T Consensus 151 ~~----------~~~~~v~ViG~G~~g~e~a~~l~~~g~~---V~l~~~~~~~~~--~~~~---~~~~~~~~gV~v~~~~ 212 (335)
T 2a87_A 151 FF----------FRDQDIAVIGGGDSAMEEATFLTRFARS---VTLVHRRDEFRA--SKIM---LDRARNNDKIRFLTNH 212 (335)
T ss_dssp GG----------GTTCEEEEECSSHHHHHHHHHHTTTCSE---EEEECSSSSCSS--CTTH---HHHHHHCTTEEEECSE
T ss_pred hh----------cCCCEEEEECCCHHHHHHHHHHHHhCCe---EEEEEcCCcCCc--cHHH---HHHHhccCCcEEEeCc
Confidence 11 1168999999999999999999876555 999999877642 1222 1244577999999999
Q ss_pred eeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCC
Q 009310 310 FVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLP 389 (538)
Q Consensus 310 ~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~ 389 (538)
.|+++..++.. .++.++.. .+++++++++|.||+|+|++|+++++.. +++
T Consensus 213 ~v~~i~~~~~~---------------------~~v~~~~~---~~g~~~~i~~D~vi~a~G~~p~~~~~~~------~l~ 262 (335)
T 2a87_A 213 TVVAVDGDTTV---------------------TGLRVRDT---NTGAETTLPVTGVFVAIGHEPRSGLVRE------AID 262 (335)
T ss_dssp EEEEEECSSSC---------------------CEEEEEEE---TTSCCEEECCSCEEECSCEEECCTTTBT------TBC
T ss_pred eeEEEecCCcE---------------------eEEEEEEc---CCCceEEeecCEEEEccCCccChhHhhc------ccc
Confidence 99999875411 23555421 1123468999999999999999887752 477
Q ss_pred cCCCCCeeeCCC-cccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHCCC
Q 009310 390 LNARGQAETDET-LCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDR 452 (538)
Q Consensus 390 l~~~G~i~vd~~-l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~~~ 452 (538)
++++|+|.||++ +++ +.|+|||+|||+..+ ++.+..|+.||+.+|.||.+.+.++
T Consensus 263 ~~~~G~i~vd~~~~~t-~~~~iya~GD~~~~~-------~~~~~~A~~~g~~aA~~i~~~l~~~ 318 (335)
T 2a87_A 263 VDPDGYVLVQGRTTST-SLPGVFAAGDLVDRT-------YRQAVTAAGSGCAAAIDAERWLAEH 318 (335)
T ss_dssp BCTTSCBCCSTTSSBC-SSTTEEECGGGTCCS-------CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCccEEeCCCCCcc-CCCCEEEeeecCCcc-------HHHHHHHHHhHHHHHHHHHHHhhcC
Confidence 888999999986 465 899999999999851 5789999999999999999988754
No 68
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.1e-34 Score=306.30 Aligned_cols=285 Identities=23% Similarity=0.273 Sum_probs=212.9
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC-------c---ch-----hhhh--------cCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-------P---ML-----YELL--------SGEV 134 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~-------p---~~-----~~~~--------~g~~ 134 (538)
.++||||||||+||++||..|++ .|++|+|||++ .++.. | ++ ...+ .|..
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~------~g~~V~lie~~-~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~ 76 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQ------LGIPTVLVEGQ-ALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGIS 76 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH------HTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHH------CCCEEEEEccC-CCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcc
Confidence 34899999999999999999998 57799999994 33211 1 00 0000 1110
Q ss_pred ------CCccccc-----------cHHHHhccCCcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEE
Q 009310 135 ------DAWEIAP-----------RFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVL 197 (538)
Q Consensus 135 ------~~~~~~~-----------~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVl 197 (538)
+...+.. .+..++++.+++++.+++..++. + ++.+++ ..+.||+|||
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~--~-------------~v~v~~-~~~~~d~lvi 140 (458)
T 1lvl_A 77 VASPRLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDG--K-------------QVEVDG-QRIQCEHLLL 140 (458)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEEEET--T-------------EEEETT-EEEECSEEEE
T ss_pred cCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEccC--C-------------EEEEee-EEEEeCEEEE
Confidence 1111111 12345567789999887665542 1 466655 6899999999
Q ss_pred eCCCCCCCCC-CCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEE
Q 009310 198 SLGAEPKLDV-VPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAI 276 (538)
Q Consensus 198 AtG~~~~~p~-ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv 276 (538)
|||+.|+.|+ +|. .. .+.+.+++..+.+ .+++|+|||+|++|+|+|..|++.+.+ |+++
T Consensus 141 ATGs~p~~~~~~~~-~~---~v~~~~~~~~~~~-------------~~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv 200 (458)
T 1lvl_A 141 ATGSSSVELPMLPL-GG---PVISSTEALAPKA-------------LPQHLVVVGGGYIGLELGIAYRKLGAQ---VSVV 200 (458)
T ss_dssp CCCEEECCBTTBCC-BT---TEECHHHHTCCSS-------------CCSEEEEECCSHHHHHHHHHHHHHTCE---EEEE
T ss_pred eCCCCCCCCCCCCc-cC---cEecHHHHhhhhc-------------cCCeEEEECcCHHHHHHHHHHHHCCCe---EEEE
Confidence 9999987765 552 22 2345555433221 268999999999999999999988766 9999
Q ss_pred ecCCccCCCCChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCc
Q 009310 277 NVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLE 356 (538)
Q Consensus 277 ~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 356 (538)
++.+.+++.+++.+.+.+.+.+++.||++++++.|++++. + + +.+.. .+++
T Consensus 201 ~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~-----------------------~-v~v~~----~~G~ 251 (458)
T 1lvl_A 201 EARERILPTYDSELTAPVAESLKKLGIALHLGHSVEGYEN-G-----------------------C-LLAND----GKGG 251 (458)
T ss_dssp CSSSSSSTTSCHHHHHHHHHHHHHHTCEEETTCEEEEEET-T-----------------------E-EEEEC----SSSC
T ss_pred EcCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEe-C-----------------------C-EEEEE----CCCc
Confidence 9999999988999999999999999999999999999986 3 3 44431 1112
Q ss_pred ceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHH
Q 009310 357 SQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQ 436 (538)
Q Consensus 357 g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~ 436 (538)
.+++++|.||+|+|.+|+.+++.. ...+++++++ +|.||+++|+ +.|+|||+|||+.. ++.+..|.+
T Consensus 252 ~~~i~~D~vv~a~G~~p~~~~l~~---~~~g~~~~~~-~i~vd~~~~t-~~~~Iya~GD~~~~--------~~~~~~A~~ 318 (458)
T 1lvl_A 252 QLRLEADRVLVAVGRRPRTKGFNL---ECLDLKMNGA-AIAIDERCQT-SMHNVWAIGDVAGE--------PMLAHRAMA 318 (458)
T ss_dssp CCEECCSCEEECCCEEECCSSSSG---GGSCCCEETT-EECCCTTCBC-SSTTEEECGGGGCS--------SCCHHHHHH
T ss_pred eEEEECCEEEECcCCCcCCCCCCc---HhcCCcccCC-EEeECCCCcC-CCCCEEEeeccCCC--------cccHHHHHH
Confidence 268999999999999999876411 1336777777 8999999998 89999999999986 678999999
Q ss_pred HHHHHHHHHHH
Q 009310 437 QADFAGWNLWA 447 (538)
Q Consensus 437 qg~~aa~~i~~ 447 (538)
||+.+|.||.+
T Consensus 319 ~g~~aa~~i~g 329 (458)
T 1lvl_A 319 QGEMVAEIIAG 329 (458)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHhcC
Confidence 99999999984
No 69
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=1.3e-34 Score=292.69 Aligned_cols=308 Identities=17% Similarity=0.149 Sum_probs=212.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcC----CCCcccCcchhh---hhcC---CCCCccccccHHHHhc
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQ----SERFVFKPMLYE---LLSG---EVDAWEIAPRFADLLA 148 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~----~~~~~~~p~~~~---~~~g---~~~~~~~~~~~~~~~~ 148 (538)
.++|+|||||++|+++|..|++ .|++|+|||+ ............ ...+ .....++...+.+.+.
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~------~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 81 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAAR------AELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSE 81 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHH------CCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHH
Confidence 4799999999999999999998 6889999998 222111110000 0001 1112233444556666
Q ss_pred cCCcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCCCCCCcccc--CcCCCChHHHHH
Q 009310 149 NTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEF--AFPFSTLEDACR 226 (538)
Q Consensus 149 ~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p~ipG~~~~--~~~~~~~~d~~~ 226 (538)
+.+++++.++++.++...+. .++.+ ++..+.||+||+|||+.|..|++||..+. .+..........
T Consensus 82 ~~gv~~~~~~v~~i~~~~~~-----------~~v~~-~~~~~~~~~vv~A~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 149 (333)
T 1vdc_A 82 RFGTTIFTETVTKVDFSSKP-----------FKLFT-DSKAILADAVILAIGAVAKRLSFVGSGEVLGGFWNRGISACAV 149 (333)
T ss_dssp HTTCEEECCCCCEEECSSSS-----------EEEEC-SSEEEEEEEEEECCCEEECCCCCBTCSSSSSCCBTTTEESCHH
T ss_pred HCCCEEEEeEEEEEEEcCCE-----------EEEEE-CCcEEEcCEEEECCCCCcCCCCCCCccccccccccCcEEEecc
Confidence 77899988888888765431 24666 66789999999999999999999987541 111111111111
Q ss_pred HHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCCChhhHHHHH-HHHHhCCCEE
Q 009310 227 VDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAAL-KVLSARKVQL 305 (538)
Q Consensus 227 ~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~-~~l~~~gV~v 305 (538)
....+. ...+++|+|||+|.+|+|+|..|.+.+.+ |+++++.+.+.. .+.+. +.+++.||++
T Consensus 150 ~~~~~~--------~~~~~~v~VvG~G~~g~e~A~~l~~~g~~---V~lv~~~~~~~~------~~~~~~~~~~~~gv~i 212 (333)
T 1vdc_A 150 CDGAAP--------IFRNKPLAVIGGGDSAMEEANFLTKYGSK---VYIIHRRDAFRA------SKIMQQRALSNPKIDV 212 (333)
T ss_dssp HHTTSG--------GGTTSEEEEECCSHHHHHHHHHHTTTSSE---EEEECSSSSCCS------CHHHHHHHHTCTTEEE
T ss_pred Cccchh--------hcCCCeEEEECCChHHHHHHHHHHhcCCe---EEEEecCCcCCc------cHHHHHHHHhCCCeeE
Confidence 111110 01268999999999999999999876554 999999876532 12333 4567899999
Q ss_pred EcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCcc
Q 009310 306 VLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRL 385 (538)
Q Consensus 306 ~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~ 385 (538)
++++.|.++..+++.. ....+.++.. ..++++++++|.||+|+|++|+.+++..
T Consensus 213 ~~~~~v~~i~~~~~~~------------------~v~~v~~~~~---~~g~~~~i~~D~vi~a~G~~p~~~~~~~----- 266 (333)
T 1vdc_A 213 IWNSSVVEAYGDGERD------------------VLGGLKVKNV---VTGDVSDLKVSGLFFAIGHEPATKFLDG----- 266 (333)
T ss_dssp ECSEEEEEEEESSSSS------------------SEEEEEEEET---TTCCEEEEECSEEEECSCEEESCGGGTT-----
T ss_pred ecCCceEEEeCCCCcc------------------ceeeEEEEec---CCCceEEEecCEEEEEeCCccchHHhhc-----
Confidence 9999999998754100 0012444411 0123478999999999999999887752
Q ss_pred CCCCcCCCCCeeeCCC-cccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHCCCCCCC
Q 009310 386 HDLPLNARGQAETDET-LCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLLP 456 (538)
Q Consensus 386 ~~~~l~~~G~i~vd~~-l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~~~~~~p 456 (538)
+++++++|+|.||++ +++ +.|+|||+|||+..+ ++.+..|+.||+.+|.+|.+.+.+++..|
T Consensus 267 -~l~~~~~G~i~vd~~~~~t-~~~~vya~GD~~~~~-------~~~~~~A~~~g~~aa~~i~~~l~~~~~~~ 329 (333)
T 1vdc_A 267 -GVELDSDGYVVTKPGTTQT-SVPGVFAAGDVQDKK-------YRQAITAAGTGCMAALDAEHYLQEIGSQE 329 (333)
T ss_dssp -SSCBCTTSCBCCCTTSCBC-SSTTEEECGGGGCSS-------CCCHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred -cccccCCCCEEechhhccc-CCCCEEEeeeccCCC-------chhHHHHHHhHHHHHHHHHHHHHhccccc
Confidence 467888999999987 466 899999999999851 47899999999999999999998766443
No 70
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=2.3e-34 Score=306.29 Aligned_cols=290 Identities=17% Similarity=0.130 Sum_probs=213.7
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcch---------------hhhh---c--CC-----
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPML---------------YELL---S--GE----- 133 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~---------------~~~~---~--g~----- 133 (538)
.+||+||||||||++||..|++ .|++|+|||++. ++..... .... . |.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~------~G~~V~liE~~~-~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~ 80 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKK------HTDKVVLIEGGA-YGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRI 80 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT------TCSCEEEEESSC-SSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEE
T ss_pred CCCEEEECCCHHHHHHHHHHHh------CCCcEEEEeCCC-CCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCC
Confidence 3799999999999999999998 678999999975 2211100 0000 0 00
Q ss_pred -CCCccccccHHHH-----------hcc-CCcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCC
Q 009310 134 -VDAWEIAPRFADL-----------LAN-TGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLG 200 (538)
Q Consensus 134 -~~~~~~~~~~~~~-----------~~~-~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG 200 (538)
.+...+...+... +.. ..++++.+...-.+ .+++.++++..+.||+||||||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~---------------~~~v~~~~~~~~~~d~lViATG 145 (492)
T 3ic9_A 81 SVNGKAVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLD---------------EHTLQVDDHSQVIAKRIVIATG 145 (492)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEE---------------TTEEEETTTEEEEEEEEEECCC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEec---------------CCEEEEcCCcEEEeCEEEEccC
Confidence 1111111111111 111 13445555443332 2357777788999999999999
Q ss_pred CCCCCCCCCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCC
Q 009310 201 AEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVET 280 (538)
Q Consensus 201 ~~~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~ 280 (538)
+.|..|+++|.... .+.+.++...+.. .+++|+|||+|++|+|+|..+.+.+.+ |+++++.+
T Consensus 146 s~p~~p~~~~~~~~--~v~t~~~~~~~~~-------------~~k~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~~ 207 (492)
T 3ic9_A 146 SRPNYPEFLAAAGS--RLLTNDNLFELND-------------LPKSVAVFGPGVIGLELGQALSRLGVI---VKVFGRSG 207 (492)
T ss_dssp EECCCCHHHHTTGG--GEECHHHHTTCSS-------------CCSEEEEESSCHHHHHHHHHHHHTTCE---EEEECCTT
T ss_pred CCCcCCCCCCccCC--cEEcHHHHhhhhh-------------cCCeEEEECCCHHHHHHHHHHHHcCCe---EEEEEECC
Confidence 99998876653211 1234444332211 268999999999999999999988766 99999999
Q ss_pred ccCCCCChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcc--e
Q 009310 281 TICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLES--Q 358 (538)
Q Consensus 281 ~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g--~ 358 (538)
++++.+++++.+.+.+.|++. |++++++.|++++.++ +++.+.+.+ .+| +
T Consensus 208 ~~l~~~d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~-----------------------~~v~v~~~~----~~G~~~ 259 (492)
T 3ic9_A 208 SVANLQDEEMKRYAEKTFNEE-FYFDAKARVISTIEKE-----------------------DAVEVIYFD----KSGQKT 259 (492)
T ss_dssp CCTTCCCHHHHHHHHHHHHTT-SEEETTCEEEEEEECS-----------------------SSEEEEEEC----TTCCEE
T ss_pred cccccCCHHHHHHHHHHHhhC-cEEEECCEEEEEEEcC-----------------------CEEEEEEEe----CCCceE
Confidence 999999999999999999998 9999999999998754 455555421 134 7
Q ss_pred EEeccEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCeeeC-CCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHH
Q 009310 359 IFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETD-ETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQ 437 (538)
Q Consensus 359 ~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd-~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~q 437 (538)
++++|.||+|+|++|+++++... ..+++++++|+|.|| +++|+ +.|+|||+|||+.. ++.+..|..|
T Consensus 260 ~i~~D~Vi~a~G~~p~~~~l~l~---~~gl~~~~~G~i~vd~~~~~t-~~~~IyA~GD~~~~--------~~~~~~A~~~ 327 (492)
T 3ic9_A 260 TESFQYVLAATGRKANVDKLGLE---NTSIELDKKNSPLFDELTLQT-SVDHIFVAGDANNT--------LTLLHEAADD 327 (492)
T ss_dssp EEEESEEEECSCCEESCSSSCGG---GSCCCBCTTCCBCCCTTTCBC-SSTTEEECGGGGTS--------SCSHHHHHHH
T ss_pred EEECCEEEEeeCCccCCCCCChh---hcCCEECCCCCEeECcccccC-CCCCEEEEEecCCC--------CccHHHHHHH
Confidence 89999999999999998874321 347889999999999 99999 99999999999986 6789999999
Q ss_pred HHHHHHHHHHH
Q 009310 438 ADFAGWNLWAA 448 (538)
Q Consensus 438 g~~aa~~i~~~ 448 (538)
|+.+|.||...
T Consensus 328 g~~aa~~i~~~ 338 (492)
T 3ic9_A 328 GKVAGTNAGAY 338 (492)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHcCC
Confidence 99999999864
No 71
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=3.5e-34 Score=305.70 Aligned_cols=290 Identities=19% Similarity=0.263 Sum_probs=217.9
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC--------cccC-------c---chh-----hhh---cC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER--------FVFK-------P---MLY-----ELL---SG 132 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~--------~~~~-------p---~~~-----~~~---~g 132 (538)
.+||+||||||||+.||.++++ .|.+|+|||+... ++.. | ++. ... ..
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~------~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~ 115 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAA------HGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSK 115 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT------TTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGG
T ss_pred CCCEEEECCCHHHHHHHHHHHH------CCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhH
Confidence 4799999999999999999999 5779999997542 2111 1 110 000 00
Q ss_pred --CCCCcccccc------------------HHHHhccCCcEEEEeeEEEEcCCCCcCcCCCceeecccEEEc----CCce
Q 009310 133 --EVDAWEIAPR------------------FADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLL----ESGL 188 (538)
Q Consensus 133 --~~~~~~~~~~------------------~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~----~~g~ 188 (538)
.+.......+ +...+++.+|+++.+...-+++... .|.. .+.+
T Consensus 116 ~~Gi~~~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~~~v-------------~V~~~~~~~~~~ 182 (542)
T 4b1b_A 116 AYGWKFDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTV-------------SYYLKGDLSKEE 182 (542)
T ss_dssp GGTEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEETTEE-------------EEEEC--CCCEE
T ss_pred hcCcccCcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCCCcc-------------eEeecccCCceE
Confidence 0111111111 2233556789999887776655432 1222 2446
Q ss_pred EEEeeEEEEeCCCCCCCCCCCCc-cccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHH
Q 009310 189 IVEYDWLVLSLGAEPKLDVVPGA-AEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERL 267 (538)
Q Consensus 189 ~~~yD~lVlAtG~~~~~p~ipG~-~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~ 267 (538)
.+.+|++|||||++|..|+.++. .+. +.+.+++..+.+. +++++|||||++|+|+|..+++++
T Consensus 183 ~i~a~~iiIATGs~P~~P~~~~~~~~~---~~ts~~~l~l~~l-------------P~~lvIIGgG~IGlE~A~~~~~lG 246 (542)
T 4b1b_A 183 TVTGKYILIATGCRPHIPDDVEGAKEL---SITSDDIFSLKKD-------------PGKTLVVGASYVALECSGFLNSLG 246 (542)
T ss_dssp EEEEEEEEECCCEEECCCSSSBTHHHH---CBCHHHHTTCSSC-------------CCSEEEECCSHHHHHHHHHHHHHT
T ss_pred EEeeeeEEeccCCCCCCCCcccCCCcc---ccCchhhhccccC-------------CceEEEECCCHHHHHHHHHHHhcC
Confidence 89999999999999998865443 232 2356666555433 789999999999999999999998
Q ss_pred HhcCcEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEe
Q 009310 268 EEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILE 347 (538)
Q Consensus 268 ~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 347 (538)
.+ ||++++ +++++.+++++.+.+.+.|++.||+++++..+.++...+ +.+.+.
T Consensus 247 ~~---VTii~~-~~~L~~~D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~-----------------------~~~~v~ 299 (542)
T 4b1b_A 247 YD---VTVAVR-SIVLRGFDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMD-----------------------DKILVE 299 (542)
T ss_dssp CC---EEEEES-SCSSTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEET-----------------------TEEEEE
T ss_pred Ce---EEEecc-cccccccchhHHHHHHHHHHhhcceeecceEEEEEEecC-----------------------CeEEEE
Confidence 87 999987 578899999999999999999999999999999998865 556665
Q ss_pred ecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCe-eeCCCcccCCCCCEEEccccccccCCCCCC
Q 009310 348 LQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQA-ETDETLCVKGHPRIFALGDSSALRDSSGRP 426 (538)
Q Consensus 348 ~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i-~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~ 426 (538)
+. ++..+++|.|++|+|.+||++.+... ..++.++..+.+ .+|+++|| +.|+|||+|||+..
T Consensus 300 ~~------~~~~~~~D~vLvAvGR~Pnt~~L~le---~~gv~~~~~~~~i~vd~~~~T-s~p~IyAiGDv~~~------- 362 (542)
T 4b1b_A 300 FS------DKTSELYDTVLYAIGRKGDIDGLNLE---SLNMNVNKSNNKIIADHLSCT-NIPSIFAVGDVAEN------- 362 (542)
T ss_dssp ET------TSCEEEESEEEECSCEEESCGGGCGG---GTTCCEETTTTEECCCTTSBC-SSTTEEECTTSBTT-------
T ss_pred Ec------CCCeEEEEEEEEcccccCCccccCcc---cceeeecccCceEeccccccc-cCCCeEEeccccCC-------
Confidence 43 66788999999999999999876533 336777776665 78899998 99999999999963
Q ss_pred CCccHHHHHHHHHHHHHHHHH
Q 009310 427 LPATAQVAFQQADFAGWNLWA 447 (538)
Q Consensus 427 ~~~~~~~A~~qg~~aa~~i~~ 447 (538)
.|.+++.|.+||++++.||..
T Consensus 363 ~p~La~~A~~eg~~aa~~i~g 383 (542)
T 4b1b_A 363 VPELAPVAIKAGEILARRLFK 383 (542)
T ss_dssp CCCCHHHHHHHHHHHHHHHHS
T ss_pred chhHHHHHHHHHHHHHHHHhc
Confidence 267999999999999999984
No 72
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=5.3e-34 Score=284.82 Aligned_cols=293 Identities=12% Similarity=0.127 Sum_probs=200.1
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCc-chhhhhc-CCCCCccccccHHHHhcc-CCcE
Q 009310 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP-MLYELLS-GEVDAWEIAPRFADLLAN-TGVQ 153 (538)
Q Consensus 77 ~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p-~~~~~~~-g~~~~~~~~~~~~~~~~~-~~v~ 153 (538)
++.+||+|||||||||+||.+|+| .|++|+|||++..-.... ..+.+.. ....+.++.....+.+.+ ..+.
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar------~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGR------ARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVH 77 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHH------TTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEE
T ss_pred CCCcCEEEECCCHHHHHHHHHHHH------CCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEE
Confidence 345899999999999999999999 678999999975311100 0011110 011222222223333333 3567
Q ss_pred EEEeeEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCCCCCCccccCc-CCCChHHHHHHHHHHH
Q 009310 154 FFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAF-PFSTLEDACRVDRKLS 232 (538)
Q Consensus 154 ~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p~ipG~~~~~~-~~~~~~d~~~~~~~l~ 232 (538)
+....+..++....- .+++.+.++..+.||+||||||++|+.|++||.++... .+...........
T Consensus 78 ~~~~~~~~~~~~~~~----------~~~v~~~~g~~~~a~~liiATGs~p~~p~i~G~~~~~~~~v~~~~~~~~~~~--- 144 (304)
T 4fk1_A 78 YYEKTVVMITKQSTG----------LFEIVTKDHTKYLAERVLLATGMQEEFPSIPNVREYYGKSLFSCPYCDGWEL--- 144 (304)
T ss_dssp EEECCEEEEEECTTS----------CEEEEETTCCEEEEEEEEECCCCEEECCSCTTHHHHBTTTEESCHHHHSGGG---
T ss_pred EEeeEEEEeeecCCC----------cEEEEECCCCEEEeCEEEEccCCccccccccCccccccceeeeccccchhHh---
Confidence 777777766543221 13678888889999999999999999999999754311 1111111111100
Q ss_pred HHHHhccCCCCCCeEEEECCChh-HHHHHHHHHHHHHhcCcEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEEcCcee
Q 009310 233 ELERRNFGKDSLIRVAVVGCGYS-GVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFV 311 (538)
Q Consensus 233 ~~~~~~~~~~~~~~VvVVGgG~~-g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V 311 (538)
.+++++|||||.. ++|+|..+...+.+ |+++++.+.+ .+.+.+.|++.|++++.+. +
T Consensus 145 ----------~~~~~~VIggG~~~~~e~a~~~~~~~~~---v~i~~~~~~~--------~~~~~~~l~~~g~~~~~~~-v 202 (304)
T 4fk1_A 145 ----------KDQPLIIISENEDHTLHMTKLVYNWSTD---LVIATNGNEL--------SQTIMDELSNKNIPVITES-I 202 (304)
T ss_dssp ----------TTSCEEEECCSHHHHHHHHHHHTTTCSC---EEEECSSCCC--------CHHHHHHHHTTTCCEECSC-E
T ss_pred ----------cCCceeeecCCCchhhhHHHHHHhCCce---EEEEeccccc--------hhhhhhhhhccceeEeeee-E
Confidence 1467888888765 56777776655444 8888876543 2456678899999999874 6
Q ss_pred eEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcC
Q 009310 312 RCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLN 391 (538)
Q Consensus 312 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~ 391 (538)
..+..++... ..+.+. +++++++|.+|+++|.+|+++++.. .+++++
T Consensus 203 ~~~~~~~~~~--------------------~~v~~~--------~g~~i~~~~~vi~~g~~~~~~~~~~-----~g~~~~ 249 (304)
T 4fk1_A 203 RTLQGEGGYL--------------------KKVEFH--------SGLRIERAGGFIVPTFFRPNQFIEQ-----LGCELQ 249 (304)
T ss_dssp EEEESGGGCC--------------------CEEEET--------TSCEECCCEEEECCEEECSSCHHHH-----TTCCCC
T ss_pred EEeecCCCee--------------------eeeecc--------ccceeeecceeeeeccccCChhhhh-----cCeEEC
Confidence 7776644211 234433 7889999999998888777666653 368899
Q ss_pred CCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHCC
Q 009310 392 ARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIND 451 (538)
Q Consensus 392 ~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~~ 451 (538)
++|+|.||+++|| +.|+|||+|||+.. .++++..|+.||+.||.+|.+.|.+
T Consensus 250 ~~G~I~vd~~~~T-s~p~IyA~GDv~~~-------~~~~~~~A~~~G~~AA~~i~~~L~~ 301 (304)
T 4fk1_A 250 SNGTFVIDDFGRT-SEKNIYLAGETTTQ-------GPSSLIIAASQGNKAAIAINSDITD 301 (304)
T ss_dssp TTSSSCSSTTCBC-SSTTEEECSHHHHT-------SCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEECcCCcc-CCCCEEEEeccCCC-------cchHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999 99999999999974 1567889999999999999988764
No 73
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=100.00 E-value=7.3e-36 Score=330.27 Aligned_cols=328 Identities=15% Similarity=0.085 Sum_probs=240.0
Q ss_pred ccccccccccchhHHHHHHHHhhhcccccccccccccccCcCCCCCCCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCC
Q 009310 30 SKSYLSFKTCRKNRFISFAASNSSGRNGDLVVTSEDESASQTYTWPDKKKPRICILGGGFGGLYTALRLESLVWQDDKKP 109 (538)
Q Consensus 30 ~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~ 109 (538)
..|-.|+.|+.+........|++||..++|.+..+.. ....+...++||||||||+|||+||..|++ .|+
T Consensus 346 ~~c~~c~~C~~~~~~~~~~~C~vnp~~g~e~~~~~~~----~~~~~~~~~~~VvIIGgG~AGl~aA~~La~------~G~ 415 (690)
T 3k30_A 346 RECIGCNICVSGDLTMSPIRCTQNPSMGEEWRRGWHP----ERIRAKESDARVLVVGAGPSGLEAARALGV------RGY 415 (690)
T ss_dssp CCCCCCCHHHHHHHTTSCCCCSSCTTTTTTTTTCCCS----SCCCCCSSCCEEEEECCSHHHHHHHHHHHH------HTC
T ss_pred ccccchhhhhhcccCCCcccCCcCcccCcccccccCc----cccCcccccceEEEECCCHHHHHHHHHHHH------CCC
Confidence 4556676665553323467899999999986542221 112344566899999999999999999999 688
Q ss_pred EEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccC-CcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcCCce
Q 009310 110 QVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANT-GVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGL 188 (538)
Q Consensus 110 ~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~-~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~ 188 (538)
+|+|||+++.+.+.........+..+...+...+...+.+. +++++.++ .++.+++.
T Consensus 416 ~V~liE~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~gv~~~~~~----------------------~v~~~~~~ 473 (690)
T 3k30_A 416 DVVLAEAGRDLGGRVTQESALPGLSAWGRVKEYREAVLAELPNVEIYRES----------------------PMTGDDIV 473 (690)
T ss_dssp EEEEECSSSSSCTHHHHHHTSTTCGGGGHHHHHHHHHHHTCTTEEEESSC----------------------CCCHHHHH
T ss_pred eEEEEecCCCCCCEeeeccCCCchhHHHHHHHHHHHHHHHcCCCEEEECC----------------------eecHHHHh
Confidence 99999999887766555555555555555566666666665 77765542 13334445
Q ss_pred EEEeeEEEEeCCCC--------CCCCCCCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEEC--CChhHHH
Q 009310 189 IVEYDWLVLSLGAE--------PKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVG--CGYSGVE 258 (538)
Q Consensus 189 ~~~yD~lVlAtG~~--------~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVG--gG~~g~E 258 (538)
.+.||+||+|||+. |..|++||.+.. .+.+..+.... ....+++|+||| +|.+|+|
T Consensus 474 ~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~~~~--~v~~~~~~l~~------------~~~~g~~VvViG~ggG~~g~e 539 (690)
T 3k30_A 474 EFGFEHVITATGATWRTDGVARFHTTALPIAEGM--QVLGPDDLFAG------------RLPDGKKVVVYDDDHYYLGGV 539 (690)
T ss_dssp HTTCCEEEECCCEEECSSCCSSSCSSCCCBCTTS--EEECHHHHHTT------------CCCSSSEEEEEECSCSSHHHH
T ss_pred hcCCCEEEEcCCCccccccccccCCCCCCCCCCC--cEEcHHHHhCC------------CCCCCCEEEEEcCCCCccHHH
Confidence 67899999999998 446778886421 12233332211 112367899999 9999999
Q ss_pred HHHHHHHHHHhcCcEEEEecCCccCCCCC-hhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCccccccc
Q 009310 259 LAATVSERLEEKGIVQAINVETTICPTGT-PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAA 337 (538)
Q Consensus 259 ~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~-~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~ 337 (538)
+|..|.+.+.+ |+++++.+.+++... +.....+.+.|++.||++++++.|++++.+
T Consensus 540 ~A~~L~~~g~~---Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~-------------------- 596 (690)
T 3k30_A 540 VAELLAQKGYE---VSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVGAG-------------------- 596 (690)
T ss_dssp HHHHHHHTTCE---EEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEESEEEEEEETT--------------------
T ss_pred HHHHHHhCCCe---eEEEecccccccccccchhHHHHHHHHHHCCCEEEcCcEEEEEECC--------------------
Confidence 99999987765 999999988877543 566788889999999999999999999873
Q ss_pred ccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccc
Q 009310 338 DKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSS 417 (538)
Q Consensus 338 ~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~ 417 (538)
++.+... ..++++++++|.||+|+|++|+++++..+ +..+. ++ +.|+||++|||+
T Consensus 597 -----~~~v~~~---~~~~~~~i~aD~VV~A~G~~p~~~l~~~l---------~~~~~-------~t-~~~~VyaiGD~~ 651 (690)
T 3k30_A 597 -----GVTVRDT---YASIERELECDAVVMVTARLPREELYLDL---------VARRD-------AG-EIASVRGIGDAW 651 (690)
T ss_dssp -----EEEEEET---TTCCEEEEECSEEEEESCEEECCHHHHHH---------HHHHH-------HT-SCSEEEECGGGT
T ss_pred -----eEEEEEc---cCCeEEEEECCEEEECCCCCCChHHHHHH---------hhhhc-------cc-CCCCEEEEeCCC
Confidence 3444321 12367789999999999999997765421 11111 44 789999999999
Q ss_pred cccCCCCCCCCccHHHHHHHHHHHHHHHHHHHCCCCCCCceec
Q 009310 418 ALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQ 460 (538)
Q Consensus 418 ~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~~~~~~p~~~~ 460 (538)
. ++.+..|++||+.+|.||.+.+.+++..||+..
T Consensus 652 ~---------~~~~~~A~~~g~~aa~~i~~~l~g~~~~p~~~~ 685 (690)
T 3k30_A 652 A---------PGTIAAAVWSGRRAAEEFDAVLPSNDEVPFRRE 685 (690)
T ss_dssp S---------CBCHHHHHHHHHHHHHHTTCCCCCTTSCSSCCC
T ss_pred c---------hhhHHHHHHHHHHHHHHHHhhccCCCCCCcChh
Confidence 8 467788999999999999999999988888764
No 74
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=100.00 E-value=6.2e-35 Score=306.55 Aligned_cols=307 Identities=16% Similarity=0.088 Sum_probs=209.2
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEE
Q 009310 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFK 156 (538)
Q Consensus 77 ~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 156 (538)
...++|+|||||||||++|..|++ .|++|+|||+++.+... +...+++...+.++.....++++..+++++.
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~------~G~~V~v~e~~~~~GG~--l~~gip~~~~~~~~~~~~~~~l~~~gv~~~~ 191 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRA------KGYEVHVYDRYDRMGGL--LVYGIPGFKLEKSVVERRVKLLADAGVIYHP 191 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHH------HTCCEEEECSSSSCSTH--HHHTSCTTTSCHHHHHHHHHHHHHTTCEEET
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH------CCCeEEEEeccCCCCCe--eeecCCCccCCHHHHHHHHHHHHHCCcEEEe
Confidence 456899999999999999999999 57899999998765322 1111122222234445556677778898876
Q ss_pred eeEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCC-CCCCCCCCccccCcCCCChHHHHHHHHHHHHHH
Q 009310 157 DRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAE-PKLDVVPGAAEFAFPFSTLEDACRVDRKLSELE 235 (538)
Q Consensus 157 ~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~-~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~ 235 (538)
+.... + .++++++ .+.||+||||||+. |+.+++||.... .+.+..+....... ..+.
T Consensus 192 ~~~v~-----~-------------~v~~~~~-~~~~d~vvlAtG~~~~~~~~ipG~~~~--gv~~a~~~l~~~~~-~~~~ 249 (456)
T 2vdc_G 192 NFEVG-----R-------------DASLPEL-RRKHVAVLVATGVYKARDIKAPGSGLG--NIVAALDYLTTSNK-VSLG 249 (456)
T ss_dssp TCCBT-----T-------------TBCHHHH-HSSCSEEEECCCCCEECCTTCSCCTTT--TEEEHHHHHHHHHH-HHCT
T ss_pred CCEec-----c-------------EEEhhHh-HhhCCEEEEecCCCCCCCCCCCCCcCC--CcEEHHHHHHHhhh-hhcc
Confidence 54211 0 1333333 35699999999997 778889986321 11222222211111 0000
Q ss_pred Hhc------cCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCcc-CCCCChhhHHHHHHHHHhCCCEEEcC
Q 009310 236 RRN------FGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTI-CPTGTPGNREAALKVLSARKVQLVLG 308 (538)
Q Consensus 236 ~~~------~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~-l~~~~~~~~~~~~~~l~~~gV~v~~~ 308 (538)
... .....+++|+|||||++|+|+|..+.+.+.+ .|+++.+.+.+ ++..+.+ .+.+++.||+++++
T Consensus 250 ~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~--~Vtiv~r~~~~~~p~~~~e-----~~~~~~~Gv~~~~~ 322 (456)
T 2vdc_G 250 DTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGAT--SVKCLYRRDRKNMPGSQRE-----VAHAEEEGVEFIWQ 322 (456)
T ss_dssp TTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCS--EEEEECSSCSTTCSSCHHH-----HHHHHHTTCEEECC
T ss_pred cccccccccccccCCCEEEEECCChhHHHHHHHHHHcCCC--EEEEEEeCCccCCCCCHHH-----HHHHHHCCCEEEeC
Confidence 000 0113478999999999999999998876542 29999998765 4443322 35678889999999
Q ss_pred ceeeEEeccccccccccCCCCCcccccccccCCCceEEe---ec-cccc--------CCcceEEeccEEEEecCCCCCCC
Q 009310 309 YFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILE---LQ-PAIK--------GLESQIFEADLVLWTVGSKPLLP 376 (538)
Q Consensus 309 ~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~~-~~~~--------~~~g~~l~~D~vI~a~G~~p~~~ 376 (538)
+.++++..++.. .++++. +. ...+ .+++.++++|+||+|+|++|+..
T Consensus 323 ~~~~~i~~~g~v---------------------~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~ 381 (456)
T 2vdc_G 323 AAPEGFTGDTVV---------------------TGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDL 381 (456)
T ss_dssp SSSCCEEEEEEE---------------------ETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCH
T ss_pred CCceEEeCCCcE---------------------EEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCcc
Confidence 999998764321 112221 00 0000 11346899999999999999865
Q ss_pred --CCCCCCCccCCCCcCCCCCeeeCCC-cccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHCCCC
Q 009310 377 --HVEPPNNRLHDLPLNARGQAETDET-LCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRP 453 (538)
Q Consensus 377 --~l~~~~~~~~~~~l~~~G~i~vd~~-l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~~~~ 453 (538)
++.. .+++++++|+|.||++ +|+ +.|+|||+|||+.. +.++..|+.||+.+|.+|.+.+.+++
T Consensus 382 ~~~l~~-----~gl~~~~~G~i~vd~~~~~T-s~~~VfA~GD~~~g--------~~~v~~A~~~G~~aA~~i~~~L~~~~ 447 (456)
T 2vdc_G 382 PNAFDE-----PELKVTRWGTLLVDHRTKMT-NMDGVFAAGDIVRG--------ASLVVWAIRDGRDAAEGIHAYAKAKA 447 (456)
T ss_dssp HHHHHS-----TTSCBCTTSSBCCCTTTCBC-SSTTEEECGGGGSS--------CCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhccc-----CCeeECCCCCEEECCCCCcC-CCCCEEEeccccCC--------chHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 4543 3578899999999987 997 89999999999986 67899999999999999999998765
Q ss_pred CC
Q 009310 454 LL 455 (538)
Q Consensus 454 ~~ 455 (538)
..
T Consensus 448 ~~ 449 (456)
T 2vdc_G 448 EA 449 (456)
T ss_dssp TC
T ss_pred CC
Confidence 44
No 75
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=100.00 E-value=4.4e-33 Score=303.78 Aligned_cols=299 Identities=18% Similarity=0.240 Sum_probs=211.6
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCC-CC-------cccC-------cc---hhh---------h
Q 009310 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQS-ER-------FVFK-------PM---LYE---------L 129 (538)
Q Consensus 77 ~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~-~~-------~~~~-------p~---~~~---------~ 129 (538)
...+||+||||||||++||..|++ .|++|+|||+. +. +... |. ... .
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~------~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~ 178 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAK------YGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDA 178 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHH------TTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccEEEECCCccHHHHHHHHHh------CCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhH
Confidence 345899999999999999999999 67899999973 21 1110 10 000 0
Q ss_pred -hcCC-CCC-------cccccc-----------HHHHhccCCcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcCCc--
Q 009310 130 -LSGE-VDA-------WEIAPR-----------FADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESG-- 187 (538)
Q Consensus 130 -~~g~-~~~-------~~~~~~-----------~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g-- 187 (538)
..|. ... ..+... +...+...+++++.+....++.... .+...+|
T Consensus 179 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~~~v-------------~v~~~~g~~ 245 (598)
T 2x8g_A 179 EHFGWSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEV-------------QITDKNQKV 245 (598)
T ss_dssp HHTTCCCCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEE-------------EEECTTCCE
T ss_pred HhCCccccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCCCEE-------------EEEeCCCCe
Confidence 0011 000 011111 1122345689998877777764422 3444555
Q ss_pred eEEEeeEEEEeCCCCCCCCCCCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHH
Q 009310 188 LIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERL 267 (538)
Q Consensus 188 ~~~~yD~lVlAtG~~~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~ 267 (538)
..+.||+||||||+.|+.|++||..++.. +.+++..+ ...+++|+|||||++|+|+|..|++.+
T Consensus 246 ~~~~~d~lviAtGs~p~~p~i~G~~~~~~---~~~~~~~~-------------~~~~~~vvViGgG~~g~E~A~~l~~~g 309 (598)
T 2x8g_A 246 STITGNKIILATGERPKYPEIPGAVEYGI---TSDDLFSL-------------PYFPGKTLVIGASYVALECAGFLASLG 309 (598)
T ss_dssp EEEEEEEEEECCCEEECCCSSTTHHHHCE---EHHHHTTC-------------SSCCCSEEEECCSHHHHHHHHHHHHTT
T ss_pred EEEEeCEEEEeCCCCCCCCCCCCcccceE---cHHHHhhC-------------ccCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 47999999999999999999999754322 22222211 112579999999999999999999887
Q ss_pred HhcCcEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEEcCceeeEEecc-----ccccccccCCCCCcccccccccCCC
Q 009310 268 EEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRV-----GEFEASVKQPESGAIPNIAADKNSD 342 (538)
Q Consensus 268 ~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (538)
.+ |+++++. .+++.+++.+.+.+.+.|++.||++++++.+.++... ... ..+
T Consensus 310 ~~---Vtlv~~~-~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~-------------------~~~ 366 (598)
T 2x8g_A 310 GD---VTVMVRS-ILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENN-------------------KPG 366 (598)
T ss_dssp CC---EEEEESS-CSSTTSCHHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTT-------------------BCC
T ss_pred CE---EEEEECC-cCcCcCCHHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccC-------------------CCc
Confidence 66 9999997 7888889999999999999999999999988887531 000 002
Q ss_pred ceEEeecccccCCcceE--EeccEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEcccccccc
Q 009310 343 KYILELQPAIKGLESQI--FEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALR 420 (538)
Q Consensus 343 ~v~~~~~~~~~~~~g~~--l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~ 420 (538)
.+.+.... .+|++ +++|.||+|+|++|+++++... ..+++++++|+|.||+++|+ +.|+|||+|||+..
T Consensus 367 ~~~v~~~~----~~g~~~~~~~D~vi~a~G~~p~~~~l~~~---~~gl~~~~~G~i~vd~~~~t-s~~~VyA~GD~~~~- 437 (598)
T 2x8g_A 367 LLLVKGHY----TDGKKFEEEFETVIFAVGREPQLSKVLCE---TVGVKLDKNGRVVCTDDEQT-TVSNVYAIGDINAG- 437 (598)
T ss_dssp EEEEEEEE----TTSCEEEEEESEEEECSCEEECGGGTBCG---GGCCCBCTTSCBCCCTTSBC-SSTTEEECGGGBTT-
T ss_pred eEEEEEEe----CCCcEEeccCCEEEEEeCCccccCccCch---hcCceECCCCcEEeCCCCcC-CCCCEEEEeeecCC-
Confidence 34333210 13444 4599999999999998765311 34688888999999999998 99999999999652
Q ss_pred CCCCCCCCccHHHHHHHHHHHHHHHHHH
Q 009310 421 DSSGRPLPATAQVAFQQADFAGWNLWAA 448 (538)
Q Consensus 421 ~~~~~~~~~~~~~A~~qg~~aa~~i~~~ 448 (538)
.+..+..|++||+.+|.||.+.
T Consensus 438 ------~~~~~~~A~~~g~~aa~~i~~~ 459 (598)
T 2x8g_A 438 ------KPQLTPVAIQAGRYLARRLFAG 459 (598)
T ss_dssp ------SCCCHHHHHHHHHHHHHHHHHC
T ss_pred ------CCccHHHHHHhHHHHHHHHhcC
Confidence 1578899999999999999863
No 76
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=1.4e-32 Score=294.33 Aligned_cols=300 Identities=17% Similarity=0.176 Sum_probs=217.0
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC--cccCcchhhhhcC-CCCCccccccHHHHhccCCcE
Q 009310 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER--FVFKPMLYELLSG-EVDAWEIAPRFADLLANTGVQ 153 (538)
Q Consensus 77 ~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~--~~~~p~~~~~~~g-~~~~~~~~~~~~~~~~~~~v~ 153 (538)
...++|+||||||||+++|.+|++ .|++|+|||+..- +........+... ......+...+...+++.+++
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~------~G~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~ 283 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSAR------KGIRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVD 283 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEE
T ss_pred cCcccEEEECCcHHHHHHHHHHHh------CCCeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCE
Confidence 345799999999999999999999 6789999987421 1101111111100 112223344556667778999
Q ss_pred EEEe-eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCCCCCCccccC----cCCCChHHHHHHH
Q 009310 154 FFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFA----FPFSTLEDACRVD 228 (538)
Q Consensus 154 ~~~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p~ipG~~~~~----~~~~~~~d~~~~~ 228 (538)
++.+ +|+.++++... . ....+.+++|..+.||+||+|||+.|+.|++||..++. +.....+.
T Consensus 284 v~~~~~v~~i~~~~~~---~-----~~~~V~~~~g~~~~~d~vVlAtG~~~~~~~ipG~~~~~~~~v~~~~~~~~----- 350 (521)
T 1hyu_A 284 VIDSQSASKLVPAATE---G-----GLHQIETASGAVLKARSIIIATGAKWRNMNVPGEDQYRTKGVTYCPHCDG----- 350 (521)
T ss_dssp EECSCCEEEEECCSST---T-----SCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTTTTTTTEECCTTCCG-----
T ss_pred EEcCCEEEEEEeccCC---C-----ceEEEEECCCCEEEcCEEEECCCCCcCCCCCCChhhhcCceEEEeecCch-----
Confidence 9987 99999754210 0 01257778888999999999999999989999975431 11111000
Q ss_pred HHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCCChhhHHHHHHHHHh-CCCEEEc
Q 009310 229 RKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSA-RKVQLVL 307 (538)
Q Consensus 229 ~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~-~gV~v~~ 307 (538)
.. ..+++|+|||+|++|+|+|..|+..+.+ |+++++.+.+... ..+.+.|++ .||++++
T Consensus 351 -~~----------~~~k~V~ViGgG~~g~E~A~~L~~~g~~---Vtlv~~~~~l~~~------~~l~~~l~~~~gV~v~~ 410 (521)
T 1hyu_A 351 -PL----------FKGKRVAVIGGGNSGVEAAIDLAGIVEH---VTLLEFAPEMKAD------QVLQDKVRSLKNVDIIL 410 (521)
T ss_dssp -GG----------GBTSEEEEECCSHHHHHHHHHHHHHBSE---EEEECSSSSCCSC------HHHHHHHTTCTTEEEEC
T ss_pred -hh----------cCCCeEEEECCCHHHHHHHHHHHhhCCE---EEEEEeCcccCcC------HHHHHHHhcCCCcEEEe
Confidence 00 1168999999999999999999988765 9999998876532 445667777 6999999
Q ss_pred CceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCC
Q 009310 308 GYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHD 387 (538)
Q Consensus 308 ~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~ 387 (538)
++.++++..+++.. .++++... . .++..++++|.||+++|++|+++++.. .
T Consensus 411 ~~~v~~i~~~~~~v--------------------~~v~~~~~--~-~g~~~~i~~D~vi~a~G~~pn~~~l~~------~ 461 (521)
T 1hyu_A 411 NAQTTEVKGDGSKV--------------------VGLEYRDR--V-SGDIHSVALAGIFVQIGLLPNTHWLEG------A 461 (521)
T ss_dssp SEEEEEEEECSSSE--------------------EEEEEEET--T-TCCEEEEECSEEEECCCEEESCGGGTT------T
T ss_pred CCEEEEEEcCCCcE--------------------EEEEEEeC--C-CCceEEEEcCEEEECcCCCCCchHHhh------h
Confidence 99999998753110 13444311 1 113357999999999999999888763 3
Q ss_pred CCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHCCC
Q 009310 388 LPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDR 452 (538)
Q Consensus 388 ~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~~~ 452 (538)
++++++|+|.||+++|+ +.|+|||+|||+..+ ++.+..|+.||+.+|.+|...+.+.
T Consensus 462 l~~~~~G~I~Vd~~~~t-s~p~VfA~GD~~~~~-------~~~~~~A~~~g~~aa~~i~~~L~~~ 518 (521)
T 1hyu_A 462 LERNRMGEIIIDAKCET-SVKGVFAAGDCTTVP-------YKQIIIATGEGAKASLSAFDYLIRT 518 (521)
T ss_dssp SCBCTTSCBCCCTTCBC-SSTTEEECSTTBCCS-------SCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccCCCCcEEeCCCCCC-CCCCEEEeecccCCC-------cceeeehHHhHHHHHHHHHHHHHhh
Confidence 67788999999999998 999999999999862 4689999999999999999887653
No 77
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=2.3e-33 Score=285.65 Aligned_cols=288 Identities=20% Similarity=0.184 Sum_probs=196.1
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC------------cchhhhhcCCCC---------Cc
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK------------PMLYELLSGEVD---------AW 137 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~------------p~~~~~~~g~~~---------~~ 137 (538)
+++|+|||||++|+++|..|++ .|++|+|||+++..... +.....+.+... ..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~------~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRR------SGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARA 76 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------SSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHH
T ss_pred cCCEEEECcCHHHHHHHHHHHH------CCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHH
Confidence 3799999999999999999999 67899999998753211 111111111100 12
Q ss_pred cccccHHHHhccCCcEEEEe-eEEEEcCCCCcCcCCCceeecccE-EEcCCceEEEeeEEEEeCCC--CCCCCCCCCccc
Q 009310 138 EIAPRFADLLANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGT-VLLESGLIVEYDWLVLSLGA--EPKLDVVPGAAE 213 (538)
Q Consensus 138 ~~~~~~~~~~~~~~v~~~~~-~v~~i~~~~~~~~~~~~~~~~~~~-v~~~~g~~~~yD~lVlAtG~--~~~~p~ipG~~~ 213 (538)
.+...+.+++++.+++++.+ +|+.++.+... .. +.++++ .+.||+||+|||. .|..|.+||..+
T Consensus 77 ~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~-----------~~~v~~~~g-~~~~d~vV~AtG~~~~~~~~~~~g~~~ 144 (357)
T 4a9w_A 77 EVLAYLAQYEQKYALPVLRPIRVQRVSHFGER-----------LRVVARDGR-QWLARAVISATGTWGEAYTPEYQGLES 144 (357)
T ss_dssp HHHHHHHHHHHHTTCCEECSCCEEEEEEETTE-----------EEEEETTSC-EEEEEEEEECCCSGGGBCCCCCTTGGG
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEECCCc-----------EEEEEeCCC-EEEeCEEEECCCCCCCCCCCCCCCccc
Confidence 33344556666778888774 88888765431 24 777777 8999999999995 677899999754
Q ss_pred cCc---CCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecC-CccCCCC--C
Q 009310 214 FAF---PFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVE-TTICPTG--T 287 (538)
Q Consensus 214 ~~~---~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~-~~~l~~~--~ 287 (538)
+.. ......+...+ .+++|+|||+|.+|+|+|.+|++.+ .|+++.+. +.+++.. .
T Consensus 145 ~~~~~~~~~~~~~~~~~---------------~~~~v~VvG~G~~g~e~a~~l~~~~----~v~~v~~~~~~~~~~~~~~ 205 (357)
T 4a9w_A 145 FAGIQLHSAHYSTPAPF---------------AGMRVAIIGGGNSGAQILAEVSTVA----ETTWITQHEPAFLADDVDG 205 (357)
T ss_dssp CCSEEEEGGGCCCSGGG---------------TTSEEEEECCSHHHHHHHHHHTTTS----EEEEECSSCCCBCCTTCCT
T ss_pred cCCcEEEeccCCChhhc---------------CCCEEEEECCCcCHHHHHHHHHhhC----CEEEEECCCCeecchhhcC
Confidence 321 11011110000 1579999999999999999998764 29999887 4555543 2
Q ss_pred hhhHHHHHHHHH----------------------------hCCCEEEcCceeeEEeccccccccccCCCCCccccccccc
Q 009310 288 PGNREAALKVLS----------------------------ARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADK 339 (538)
Q Consensus 288 ~~~~~~~~~~l~----------------------------~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (538)
..+.+.+.+.+. +.|+ +..+..+.+++.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-i~~~~~v~~~~~----------------------- 261 (357)
T 4a9w_A 206 RVLFERATERWKAQQEGREPDLPPGGFGDIVMVPPVLDARARGV-LAAVPPPARFSP----------------------- 261 (357)
T ss_dssp HHHHTC----------------------CBCCCHHHHHHHHTTC-CCEECCCSEEET-----------------------
T ss_pred ccHHHHHHHHHhccccccCCCcccccccCcccChhHHHHHhcCc-eEEecCcceEeC-----------------------
Confidence 333333333332 2333 333344444443
Q ss_pred CCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCeeeCCC--cccCCCCCEEEcc--c
Q 009310 340 NSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDET--LCVKGHPRIFALG--D 415 (538)
Q Consensus 340 ~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~~--l~~~~~~~VfaiG--D 415 (538)
+++.+. +++++++|+||+|+|++|+++++... ++. +++|+|.||++ +++ +.|+|||+| |
T Consensus 262 --~~v~~~--------~g~~i~~D~vi~a~G~~p~~~~l~~~-----gl~-~~~G~i~vd~~~l~~t-~~~~vya~Gd~d 324 (357)
T 4a9w_A 262 --TGMQWA--------DGTERAFDAVIWCTGFRPALSHLKGL-----DLV-TPQGQVEVDGSGLRAL-AVPSVWLLGYGD 324 (357)
T ss_dssp --TEEECT--------TSCEEECSEEEECCCBCCCCGGGTTT-----TCB-CTTSCBCBCTTSCBBS-SCTTEEECSSCG
T ss_pred --CeeEEC--------CCCEecCCEEEECCCcCCCCcccCcc-----ccc-CCCCCccccCCcccCC-CCCCeEEecccc
Confidence 344443 77899999999999999999988754 456 78899999998 666 999999999 5
Q ss_pred cccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHCC
Q 009310 416 SSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIND 451 (538)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~~ 451 (538)
|+.. .++++..|..||+.+|.||.+.+.+
T Consensus 325 ~~~~-------~~~~~~~A~~~g~~~a~~i~~~l~g 353 (357)
T 4a9w_A 325 WNGM-------ASATLIGVTRYAREAVRQVTAYCAD 353 (357)
T ss_dssp GGST-------TCSSTTTHHHHHHHHHHHHHHHTC-
T ss_pred cccc-------chhhhhhhHHHHHHHHHHHHHHHHh
Confidence 5541 2567778999999999999999987
No 78
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=100.00 E-value=8.1e-35 Score=323.18 Aligned_cols=321 Identities=16% Similarity=0.054 Sum_probs=213.0
Q ss_pred HHHHhhhcccccccccccccccCcCCCCCCCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcch
Q 009310 47 FAASNSSGRNGDLVVTSEDESASQTYTWPDKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPML 126 (538)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~ 126 (538)
.+.|.+||..++|.+..+.. ....+....++|||||||||||+||..|++ .|++|+|||+++.+......
T Consensus 361 ~~~C~~n~~~g~e~~~~~~~----~~~~~~~~~~~VvIIGgGpAGl~aA~~L~~------~G~~Vtlie~~~~~GG~~~~ 430 (729)
T 1o94_A 361 PMICTQNATAGEEYRRGWHP----EKFRQTKNKDSVLIVGAGPSGSEAARVLME------SGYTVHLTDTAEKIGGHLNQ 430 (729)
T ss_dssp CCCCSSCTTTTTHHHHCCCT----TCCCCCSSCCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSTTTTHHH
T ss_pred ceeeccCccccccccccccc----cccccccCCceEEEECCCHHHHHHHHHHHH------CCCeEEEEeCCCCcCCeeee
Confidence 46799999999875422111 111333456899999999999999999999 68899999999876544333
Q ss_pred hhhhcCCCCCccccccHHHHhccCCcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCC----
Q 009310 127 YELLSGEVDAWEIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAE---- 202 (538)
Q Consensus 127 ~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~---- 202 (538)
...+.+......+...+...++... . ....+..+.... .++++++..+.||+||||||+.
T Consensus 431 ~~~~pg~~~~~~~~~~~~~~i~~~~-~-~~~~~v~i~~~~--------------~v~~~~~~~~~~d~vviAtG~~~~~~ 494 (729)
T 1o94_A 431 VAALPGLGEWSYHRDYRETQITKLL-K-KNKESQLALGQK--------------PMTADDVLQYGADKVIIATGARWNTD 494 (729)
T ss_dssp HTTSTTCGGGHHHHHHHHHHHHHHH-H-HSTTCEEECSCC--------------CCCHHHHHTSCCSEEEECCCEEECSS
T ss_pred cccCCChHHHHHHHHHHHHHHHHhh-c-ccCCceEEEeCe--------------EEehhhccccCCCEEEEcCCCCcccc
Confidence 2222232211111111212221110 0 000112222111 2444455568899999999998
Q ss_pred ----CCCCCCCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEEC--CChhHHHHHHHHHHHHHhcCcEEEE
Q 009310 203 ----PKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVG--CGYSGVELAATVSERLEEKGIVQAI 276 (538)
Q Consensus 203 ----~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVG--gG~~g~E~A~~l~~~~~~~~~Vtlv 276 (538)
|..|++||.+++...+.+..+.... ....+++|+||| ||.+|+|+|..|++.+.+ |+++
T Consensus 495 ~~~~p~~~~ipG~~~~~~~v~~~~~~l~~------------~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~---Vtlv 559 (729)
T 1o94_A 495 GTNCLTHDPIPGADASLPDQLTPEQVMDG------------KKKIGKRVVILNADTYFMAPSLAEKLATAGHE---VTIV 559 (729)
T ss_dssp CCCTTTSSCCTTCCTTSTTEECHHHHHHC------------CSCCCSEEEEEECCCSSHHHHHHHHHHHTTCE---EEEE
T ss_pred cccCccCCCCCCccccCCCEEEHHHHhcC------------CCCCCCeEEEEcCCCCchHHHHHHHHHHcCCE---EEEE
Confidence 5677889975332233344443221 112367999998 999999999999988765 9999
Q ss_pred ecCCccCCC--CChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeeccc---
Q 009310 277 NVETTICPT--GTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPA--- 351 (538)
Q Consensus 277 ~~~~~~l~~--~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--- 351 (538)
++.+ +++. ++.. ...+.+.|++.||++++++.|++|+.++ ++++....
T Consensus 560 ~~~~-l~~~~~~~~~-~~~~~~~l~~~GV~i~~~~~v~~i~~~~-------------------------v~~~~~~~~~~ 612 (729)
T 1o94_A 560 SGVH-LANYMHFTLE-YPNMMRRLHELHVEELGDHFCSRIEPGR-------------------------MEIYNIWGDGS 612 (729)
T ss_dssp ESSC-TTHHHHHTTC-HHHHHHHHHHTTCEEECSEEEEEEETTE-------------------------EEEEETTCSCS
T ss_pred eccc-cccccccccc-HHHHHHHHHhCCCEEEcCcEEEEEECCe-------------------------EEEEEecCCce
Confidence 9988 6542 2323 5677888999999999999999998632 22211000
Q ss_pred ------------ccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccc
Q 009310 352 ------------IKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSAL 419 (538)
Q Consensus 352 ------------~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~ 419 (538)
..+++.+++++|.||+|+|.+|+++++..+ . ..+|+++|+ +.|+|||+|||+.
T Consensus 613 ~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~l~~~l-------~------~~vd~~~~t-~~~~VyAiGD~~~- 677 (729)
T 1o94_A 613 KRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSECTLWNEL-------K------ARESEWAEN-DIKGIYLIGDAEA- 677 (729)
T ss_dssp CCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECCHHHHHH-------H------HTGGGTGGG-TCCEEEECGGGTS-
T ss_pred EEecccccccccccCCcceeeeCCEEEECCCCCCChHHHHHH-------h------hhccccccc-CCCCeEEEeCccc-
Confidence 011133459999999999999998765421 1 136888998 8999999999987
Q ss_pred cCCCCCCCCccHHHHHHHHHHHHHHHHHHHCCCCCCCcee
Q 009310 420 RDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLLPFRF 459 (538)
Q Consensus 420 ~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~~~~~~p~~~ 459 (538)
+..+..|++||+.+|.+|.+.+.+.+ .||.+
T Consensus 678 --------~~~~~~A~~~G~~aA~~i~~~l~~~~-~p~~~ 708 (729)
T 1o94_A 678 --------PRLIADATFTGHRVAREIEEANPQIA-IPYKR 708 (729)
T ss_dssp --------CCCHHHHHHHHHHHHHTTTSSCTTSC-CCCCC
T ss_pred --------hhhHHHHHHHHHHHHHHhhhhcccCC-CCeee
Confidence 46788999999999999988776654 47744
No 79
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.98 E-value=3.2e-32 Score=279.03 Aligned_cols=294 Identities=14% Similarity=0.144 Sum_probs=200.5
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCC-EEEEEcCCCCcc------------cCcchhhhhcCC------------
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSERFV------------FKPMLYELLSGE------------ 133 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~~~~~------------~~p~~~~~~~g~------------ 133 (538)
.++|+|||||+||+++|..|++ .|+ +|+|||+++ .. +.+.......|.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~------~g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 76 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKD------FGITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSP 76 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCH
T ss_pred cCcEEEECcCHHHHHHHHHHHH------cCCCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhccccccc
Confidence 4799999999999999999998 677 999999986 11 011110000010
Q ss_pred --------CCCccccccHHHHhccCCcEEEEe-eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCC
Q 009310 134 --------VDAWEIAPRFADLLANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPK 204 (538)
Q Consensus 134 --------~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~ 204 (538)
.....+...+..++++.+++++.+ .|+.++.+... ..+.+.++ .+.||+||+|||+.+.
T Consensus 77 ~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~-----------~~v~~~~g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 77 AFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAY-----------YTIATTTE-TYHADYIFVATGDYNF 144 (369)
T ss_dssp HHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS-----------EEEEESSC-CEEEEEEEECCCSTTS
T ss_pred cccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCe-----------EEEEeCCC-EEEeCEEEECCCCCCc
Confidence 011112233445556678998875 78888765321 25666666 6899999999999865
Q ss_pred CCCCCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCC
Q 009310 205 LDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICP 284 (538)
Q Consensus 205 ~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~ 284 (538)
|.+|+ +.......+.+.. . .++++|+|||+|.+|+|+|..|.+.+.+ |+++++.+.+++
T Consensus 145 -p~ip~--~~~~~~~~~~~~~---~------------~~~~~vvVvG~G~~g~e~a~~l~~~g~~---V~lv~~~~~~~~ 203 (369)
T 3d1c_A 145 -PKKPF--KYGIHYSEIEDFD---N------------FNKGQYVVIGGNESGFDAAYQLAKNGSD---IALYTSTTGLND 203 (369)
T ss_dssp -BCCCS--SSCEEGGGCSCGG---G------------SCSSEEEEECCSHHHHHHHHHHHHTTCE---EEEECC------
T ss_pred -cCCCC--CceechhhcCChh---h------------cCCCEEEEECCCcCHHHHHHHHHhcCCe---EEEEecCCCCCC
Confidence 56666 2211111111100 0 1257999999999999999999887655 999999887764
Q ss_pred -------CCChhhHHHHHHHHHhCC-CEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCc
Q 009310 285 -------TGTPGNREAALKVLSARK-VQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLE 356 (538)
Q Consensus 285 -------~~~~~~~~~~~~~l~~~g-V~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 356 (538)
.+++...+.+.+.|++.| |++++++.|.+++.++ +.+.+.+. +
T Consensus 204 ~~~d~~~~~~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~-----------------------~~~~v~~~------~ 254 (369)
T 3d1c_A 204 PDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNN-----------------------GQYHISFD------S 254 (369)
T ss_dssp ----CTTSCCHHHHHHHHHHHHTTCCEEEECSCCEEEEEEET-----------------------TEEEEEES------S
T ss_pred CCCCCCccCCHHHHHHHHHHHhhCCcEEEecCcEEEEEEecC-----------------------CceEEEec------C
Confidence 245667788889999997 9999999999996533 33344432 5
Q ss_pred ceEEe-ccEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHH
Q 009310 357 SQIFE-ADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAF 435 (538)
Q Consensus 357 g~~l~-~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~ 435 (538)
|+.++ +|.||+|+|++|+.+++... +++ +++|++.||++++.++.|+||++|||+..++. ....+..+.
T Consensus 255 g~~~~~~d~vi~a~G~~~~~~~~~~~-----~~~-~~~g~i~v~~~~~~t~~~~v~a~GD~~~~~~~----~~~~~~~~~ 324 (369)
T 3d1c_A 255 GQSVHTPHEPILATGFDATKNPIVQQ-----LFV-TTNQDIKLTTHDESTRYPNIFMIGATVENDNA----KLCYIYKFR 324 (369)
T ss_dssp SCCEEESSCCEECCCBCGGGSHHHHH-----HSC-CTTSCCCBCTTSBBSSSTTEEECSTTCCCSSC----CCCSHHHHG
T ss_pred CeEeccCCceEEeeccCCccchhhhh-----hcc-CCCCCEEechhhcccCCCCeEEeccccccCCe----eEEEEehhh
Confidence 55554 69999999999997665421 244 67899999987555589999999999986431 122445688
Q ss_pred HHHHHHHHHHHHHHCC
Q 009310 436 QQADFAGWNLWAAIND 451 (538)
Q Consensus 436 ~qg~~aa~~i~~~l~~ 451 (538)
+||+.+|++|.+.+..
T Consensus 325 ~~a~~~a~~l~~~~~~ 340 (369)
T 3d1c_A 325 ARFAVLAHLLTQREGL 340 (369)
T ss_dssp GGHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcccCC
Confidence 8999999999988754
No 80
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.97 E-value=3.1e-32 Score=300.43 Aligned_cols=301 Identities=18% Similarity=0.197 Sum_probs=213.3
Q ss_pred ccccccccchhHH-HHHHHHhhhcccccccccccccccCcCCCCCCCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCE
Q 009310 32 SYLSFKTCRKNRF-ISFAASNSSGRNGDLVVTSEDESASQTYTWPDKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQ 110 (538)
Q Consensus 32 ~~~~~~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~ 110 (538)
|-.|+..|..+.+ ..++.|.+||..++|.... ..+...+++|||||||+||++||..|++ .|++
T Consensus 334 c~~c~~~C~~~~~~~~~~~C~~np~~~~e~~~~---------~~~~~~~~~vvIIGgG~AGl~aA~~l~~------~g~~ 398 (671)
T 1ps9_A 334 CIGCNQACLDQIFVGKVTSCLVNPRACHETKMP---------ILPAVQKKNLAVVGAGPAGLAFAINAAA------RGHQ 398 (671)
T ss_dssp CCCCCTTTHHHHHTTCCCCCSSCTTTTCTTTSC---------CCSCSSCCEEEEECCSHHHHHHHHHHHT------TTCE
T ss_pred ccccccccchhccCCCceEEEeCcccccccccC---------CCCCCCCCeEEEECCCHHHHHHHHHHHh------CCCe
Confidence 3456553333221 2356799999999886441 1233456899999999999999999998 6889
Q ss_pred EEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcCCceEE
Q 009310 111 VLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIV 190 (538)
Q Consensus 111 V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~ 190 (538)
|+|||+++++++...+...+.+.....+....+...+++.+++++.++.. ... .+
T Consensus 399 V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v----------------------~~~---~~ 453 (671)
T 1ps9_A 399 VTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTV----------------------TAD---QL 453 (671)
T ss_dssp EEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCC----------------------CSS---SS
T ss_pred EEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcEe----------------------cHH---Hh
Confidence 99999998887766555444444333334444556666778888776421 001 12
Q ss_pred -EeeEEEEeCCCCCCCCCCCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHh
Q 009310 191 -EYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEE 269 (538)
Q Consensus 191 -~yD~lVlAtG~~~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~ 269 (538)
.||+||||||+.|+.|++||.+.. .+.+..+.... ....+++|+|||||++|+|+|..|++.+.+
T Consensus 454 ~~~d~lviAtG~~p~~~~i~G~~~~--~v~~~~~~l~~------------~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~ 519 (671)
T 1ps9_A 454 QAFDETILASGIVPRTPPIDGIDHP--KVLSYLDVLRD------------KAPVGNKVAIIGCGGIGFDTAMYLSQPGES 519 (671)
T ss_dssp CCSSEEEECCCEEECCCCCBTTTST--TEEEHHHHHTS------------CCCCCSEEEEECCHHHHHHHHHHHTCCSSC
T ss_pred hcCCEEEEccCCCcCCCCCCCCCCC--cEeeHHHHhhC------------CCCCCCeEEEECCChhHHHHHHHHHhcCCC
Confidence 899999999999999999997532 12233222110 112368999999999999999999865421
Q ss_pred ----------------------------------cCcEEEEecCCccCC-CCChhhHHHHHHHHHhCCCEEEcCceeeEE
Q 009310 270 ----------------------------------KGIVQAINVETTICP-TGTPGNREAALKVLSARKVQLVLGYFVRCI 314 (538)
Q Consensus 270 ----------------------------------~~~Vtlv~~~~~~l~-~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i 314 (538)
...|+++++.+..+. .+++.....+.+.|++.||++++++.|+++
T Consensus 520 vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i 599 (671)
T 1ps9_A 520 TSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKI 599 (671)
T ss_dssp GGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEE
T ss_pred cccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEE
Confidence 023788888765543 567777888889999999999999999999
Q ss_pred eccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcCCCC
Q 009310 315 RRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARG 394 (538)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G 394 (538)
++ +++++. . + ++.+++++|.||+|+|++|+++++.. +
T Consensus 600 ~~-------------------------~~v~~~-~---~-G~~~~i~~D~Vi~a~G~~p~~~l~~~---------l---- 636 (671)
T 1ps9_A 600 DD-------------------------DGLHVV-I---N-GETQVLAVDNVVICAGQEPNRALAQP---------L---- 636 (671)
T ss_dssp ET-------------------------TEEEEE-E---T-TEEEEECCSEEEECCCEEECCTTHHH---------H----
T ss_pred eC-------------------------CeEEEe-c---C-CeEEEEeCCEEEECCCccccHHHHHH---------H----
Confidence 86 445553 1 1 12368999999999999999876532 1
Q ss_pred CeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHH
Q 009310 395 QAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNL 445 (538)
Q Consensus 395 ~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i 445 (538)
+. ..++||++|||+... +..+..|++||+.+|.||
T Consensus 637 --------~~-~g~~v~aiGD~~~~~-------~~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 637 --------ID-SGKTVHLIGGCDVAM-------ELDARRAIAQGTRLALEI 671 (671)
T ss_dssp --------HT-TTCCEEECGGGTCCS-------SCCHHHHHHHHHHHHHHC
T ss_pred --------Hh-cCCCEEEECCcCccC-------chhHHHHHHHHHHHHHhC
Confidence 11 237899999999852 346999999999999985
No 81
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.97 E-value=2.6e-30 Score=273.32 Aligned_cols=323 Identities=15% Similarity=0.114 Sum_probs=196.1
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchh--hhh--------------------------
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLY--ELL-------------------------- 130 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~--~~~-------------------------- 130 (538)
.++|||||||+||+++|..|++.+.+..+ ++|+|||+++.+.|.+... ...
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~-~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~ 108 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGA-LEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLH 108 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCC-CCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCc-ccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhh
Confidence 46999999999999999999994310000 7999999999776654311 000
Q ss_pred -cC---------CC--CCccccccHHHHhccCCcEEEEe-eEEEEcCC---CCcCcCCCceeecccEEEcCCce----EE
Q 009310 131 -SG---------EV--DAWEIAPRFADLLANTGVQFFKD-RVKLLCPS---DHLGVNGPMACTHGGTVLLESGL----IV 190 (538)
Q Consensus 131 -~g---------~~--~~~~~~~~~~~~~~~~~v~~~~~-~v~~i~~~---~~~~~~~~~~~~~~~~v~~~~g~----~~ 190 (538)
.+ .. ...++...+..+.+..++.+..+ +|+.++.. .+. ...+|.+.++. .+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~---------~~~~V~~~~g~g~~~~~ 179 (463)
T 3s5w_A 109 KHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQV---------EALRVISRNADGEELVR 179 (463)
T ss_dssp HTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEE---------EEEEEEEEETTSCEEEE
T ss_pred hcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCce---------EEEEEEEecCCCceEEE
Confidence 00 00 00111122333444556777764 68888754 220 00135555554 89
Q ss_pred EeeEEEEeCCCCCCCCC-CCCccc--cCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHH-
Q 009310 191 EYDWLVLSLGAEPKLDV-VPGAAE--FAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSER- 266 (538)
Q Consensus 191 ~yD~lVlAtG~~~~~p~-ipG~~~--~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~- 266 (538)
.||+||+|||+.|..|+ +++... ..+......+ .+ +.+... ...+++|+|||+|.+|+|+|.+|.+.
T Consensus 180 ~~d~lVlAtG~~p~~p~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~------~~~~~~vvVvGgG~sg~e~a~~l~~~~ 250 (463)
T 3s5w_A 180 TTRALVVSPGGTPRIPQVFRALKGDGRVFHHSQYLE--HM-AKQPCS------SGKPMKIAIIGGGQSAAEAFIDLNDSY 250 (463)
T ss_dssp EESEEEECCCCEECCCGGGGGGTTCTTEEEGGGHHH--HH-CC-------------CEEEEEECCSHHHHHHHHHHHHHC
T ss_pred EeCEEEECCCCCCCCcchhhhcCCCCcEEECHHHHh--hH-HHhhhc------ccCCCeEEEECCCHhHHHHHHHHHhcC
Confidence 99999999999887665 222211 1111111111 11 111000 00167999999999999999999988
Q ss_pred -HHhcCcEEEEecCCccCCCC--------------------ChhhHHHHHHHHHh-------------------------
Q 009310 267 -LEEKGIVQAINVETTICPTG--------------------TPGNREAALKVLSA------------------------- 300 (538)
Q Consensus 267 -~~~~~~Vtlv~~~~~~l~~~--------------------~~~~~~~~~~~l~~------------------------- 300 (538)
+.+ |+++++.+.+++.. ++..+..+.+.+..
T Consensus 251 ~~~~---Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 327 (463)
T 3s5w_A 251 PSVQ---ADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIERIYGVFYRQKVSG 327 (463)
T ss_dssp TTEE---EEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHC
T ss_pred CCCe---EEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHHHHHHHHHHHhcC
Confidence 544 99999998876532 22222222222222
Q ss_pred -CCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCC--CCC
Q 009310 301 -RKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPL--LPH 377 (538)
Q Consensus 301 -~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~--~~~ 377 (538)
.||++++++.|+++..++ +++.+.+.+..+ ++.+++++|.||+|+|++|+ .++
T Consensus 328 ~~~v~i~~~~~v~~v~~~~-----------------------~~~~v~~~~~~~-g~~~~~~~D~Vv~AtG~~p~~~~~~ 383 (463)
T 3s5w_A 328 IPRHAFRCMTTVERATATA-----------------------QGIELALRDAGS-GELSVETYDAVILATGYERQLHRQL 383 (463)
T ss_dssp CCCSEEETTEEEEEEEEET-----------------------TEEEEEEEETTT-CCEEEEEESEEEECCCEECCC-CTT
T ss_pred CCCeEEEeCCEEEEEEecC-----------------------CEEEEEEEEcCC-CCeEEEECCEEEEeeCCCCCCccch
Confidence 699999999999998754 445555432211 23446999999999999999 566
Q ss_pred CCCCCCccCCCCcCCCCCeeeCCCcccCC----CCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHCCCC
Q 009310 378 VEPPNNRLHDLPLNARGQAETDETLCVKG----HPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRP 453 (538)
Q Consensus 378 l~~~~~~~~~~~l~~~G~i~vd~~l~~~~----~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~~~~ 453 (538)
+..+. ..+ |++.||+++++.. .|+||++|||....+ -..+.....|.+++++++..+.+...+.+
T Consensus 384 l~~l~-----~~~---g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~~~g---~~~~~l~~~a~r~~~i~~~~~~~~~~~~~ 452 (463)
T 3s5w_A 384 LEPLA-----EYL---GDHEIGRDYRLQTDERCKVAIYAQGFSQASHG---LSDTLLSVLPVRAEEISGSLYQHLKPGTA 452 (463)
T ss_dssp TGGGG-----GGB---C--CCCTTSBCCBCTTBCSEEEESSCCHHHHC---TTTTSSTTHHHHHHHHHHHHHHHHC----
T ss_pred hHHHH-----HHh---CCcccCcccccccCCCCCCeEEEcCCCcccCC---cCccchhHHHHHHHHHHHHHHhhcCCchh
Confidence 54322 111 8899999999854 456999999987532 23467778899999988877777666666
Q ss_pred CCCce
Q 009310 454 LLPFR 458 (538)
Q Consensus 454 ~~p~~ 458 (538)
+++|.
T Consensus 453 ~~~~~ 457 (463)
T 3s5w_A 453 ARALH 457 (463)
T ss_dssp -----
T ss_pred HHHHh
Confidence 65543
No 82
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.97 E-value=1.4e-30 Score=273.81 Aligned_cols=313 Identities=14% Similarity=0.112 Sum_probs=208.9
Q ss_pred CCeEEEECCcHHHHHHHHHhhh-cccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe
Q 009310 79 KPRICILGGGFGGLYTALRLES-LVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~-~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (538)
+++|+||||||||++||..|++ ...+...+++|+|||+++.++. ...+.+.++.....++...+.+++.+.+++++.+
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg-~~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~~ 81 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWG-LVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGN 81 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCST-HHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEES
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCC-ccccccCCCCCCHHHHHHHHHHHHhcCCCEEEee
Confidence 4799999999999999999988 5210011789999999877432 2233333444445566667778888889998876
Q ss_pred eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCC-CCCCCCCCccccCcCCCChHHHHHHHHHHHHHHH
Q 009310 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAE-PKLDVVPGAAEFAFPFSTLEDACRVDRKLSELER 236 (538)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~-~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~ 236 (538)
. .++ + .++++++ .+.||+||+|||+. ++.+++||.+. ..+.+..+.....+......
T Consensus 82 v--~v~---~-------------~v~~~~~-~~~~d~lViAtG~~~~~~~~ipG~~~--~gv~~~~~~~~~~~~~~d~~- 139 (456)
T 1lqt_A 82 V--VVG---E-------------HVQPGEL-SERYDAVIYAVGAQSDRMLNIPGEDL--PGSIAAVDFVGWYNAHPHFE- 139 (456)
T ss_dssp C--CBT---T-------------TBCHHHH-HHHSSEEEECCCCCEECCCCCTTTTS--TTEEEHHHHHHHHTTCGGGT-
T ss_pred E--EEC---C-------------EEEECCC-eEeCCEEEEeeCCCCCCCCCCCCCCC--CCcEEHHHHHhhhhcCcccc-
Confidence 2 121 1 2444444 47899999999997 78888999741 11223333322111000000
Q ss_pred hccCCCCCCeEEEECCChhHHHHHHHHHHHHH----------------h--cCcEEEEecCCccCCCCCh----------
Q 009310 237 RNFGKDSLIRVAVVGCGYSGVELAATVSERLE----------------E--KGIVQAINVETTICPTGTP---------- 288 (538)
Q Consensus 237 ~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~----------------~--~~~Vtlv~~~~~~l~~~~~---------- 288 (538)
.......+++|+|||+|++|+|+|..|++... + ...|+++.+.+.+...+.+
T Consensus 140 ~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~elrel~~lp 219 (456)
T 1lqt_A 140 QVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLD 219 (456)
T ss_dssp TCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHHHHGGGCT
T ss_pred cchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHHHHhhcCC
Confidence 00011136899999999999999999986421 1 1249999998876544321
Q ss_pred ---------hh------------------HHHHHHHHHh------CCCEEEcCceeeEEeccccccccccCCCCCccccc
Q 009310 289 ---------GN------------------REAALKVLSA------RKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNI 335 (538)
Q Consensus 289 ---------~~------------------~~~~~~~l~~------~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~ 335 (538)
++ .+.+.+.+++ +||++++++.+.+|..++..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v--------------- 284 (456)
T 1lqt_A 220 GVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKV--------------- 284 (456)
T ss_dssp TEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSSC---------------
T ss_pred CceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCcE---------------
Confidence 11 2333444555 79999999999999875321
Q ss_pred ccccCCCceEEeecccccC--------Ccc--eEEeccEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCeeeCCCcccC
Q 009310 336 AADKNSDKYILELQPAIKG--------LES--QIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVK 405 (538)
Q Consensus 336 ~~~~~~~~v~~~~~~~~~~--------~~g--~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~~l~~~ 405 (538)
.++++.....+.. .+| ++++||+||+++|++|+. + . +++++++|++.+|+++|++
T Consensus 285 ------~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~-l-~-------gl~~d~~g~i~vn~~~rvt 349 (456)
T 1lqt_A 285 ------ERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVP-T-P-------GLPFDDQSGTIPNVGGRIN 349 (456)
T ss_dssp ------CEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEECCC-C-T-------TSCCBTTTTBCCEETTEET
T ss_pred ------eEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccccccCC-C-C-------CCcccCCCCeeECCCCcCC
Confidence 2344431000000 023 579999999999999995 3 1 4778888999999999965
Q ss_pred CCCCEEEccccccccCCCCCCCCc-cHHHHHHHHHHHHHHHHHHHCCC
Q 009310 406 GHPRIFALGDSSALRDSSGRPLPA-TAQVAFQQADFAGWNLWAAINDR 452 (538)
Q Consensus 406 ~~~~VfaiGD~~~~~~~~~~~~~~-~~~~A~~qg~~aa~~i~~~l~~~ 452 (538)
+.|+|||+|||+.. |. .+..|+.||..+|.+|...+.+.
T Consensus 350 ~~pgvya~GD~~~g--------p~~~i~~a~~~g~~~a~~i~~~l~~~ 389 (456)
T 1lqt_A 350 GSPNEYVVGWIKRG--------PTGVIGTNKKDAQDTVDTLIKNLGNA 389 (456)
T ss_dssp TCSSEEECTHHHHC--------SCSCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeccCCC--------CchhHHHHHHHHHHHHHHHHHHHHhC
Confidence 89999999999975 33 45579999999999999887653
No 83
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.97 E-value=1.6e-30 Score=298.17 Aligned_cols=317 Identities=17% Similarity=0.132 Sum_probs=208.6
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCC-EEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEE
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFK 156 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 156 (538)
..++|+||||||||++||..|++ .|+ +|+|||+++.+.+.. .+. ......+.++.....+++++.+++++.
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~------~G~~~Vtv~E~~~~~GG~~-~~~-ip~~~~~~~~~~~~~~~~~~~gv~~~~ 257 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLAR------LGYSDITIFEKQEYVGGLS-TSE-IPQFRLPYDVVNFEIELMKDLGVKIIC 257 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHH------TTCCCEEEEESSSSCSTHH-HHT-SCTTTSCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCCEEEEECccHHHHHHHHHHHh------cCCCcEEEEeCCCCCCccc-ccc-CCcccCCHHHHHHHHHHHHHCCcEEEc
Confidence 45899999999999999999999 677 799999987654321 111 111111222333334667778999988
Q ss_pred eeEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCC-CCCCCCC-CCccccCcCCCChHHHHHHHHHHHHH
Q 009310 157 DRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGA-EPKLDVV-PGAAEFAFPFSTLEDACRVDRKLSEL 234 (538)
Q Consensus 157 ~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~-~~~~p~i-pG~~~~~~~~~~~~d~~~~~~~l~~~ 234 (538)
+..... + .++++++..+.||+||||||+ .|+.+++ +|+.+. ..+.+..+...........
T Consensus 258 ~~~v~~----~-------------~v~~~~~~~~~~d~vvlAtGa~~p~~l~~~~G~~~~-~gv~~a~~~L~~~~~~~~~ 319 (1025)
T 1gte_A 258 GKSLSE----N-------------EITLNTLKEEGYKAAFIGIGLPEPKTDDIFQGLTQD-QGFYTSKDFLPLVAKSSKA 319 (1025)
T ss_dssp SCCBST----T-------------SBCHHHHHHTTCCEEEECCCCCEECCCGGGTTCCTT-TTEEEHHHHHHHHHHHHCB
T ss_pred ccEecc----c-------------eEEhhhcCccCCCEEEEecCCCCCCCCCCCCCCCCC-CCEEEhHHHHHHHHhhccc
Confidence 753311 1 244444545789999999999 4776654 465321 1122333333221110000
Q ss_pred HH--hc-cCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCC-ccCCCCChhhHHHHHHHHHhCCCEEEcCce
Q 009310 235 ER--RN-FGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVET-TICPTGTPGNREAALKVLSARKVQLVLGYF 310 (538)
Q Consensus 235 ~~--~~-~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~ 310 (538)
.. .. .....+++|+|||||++|+|+|..+.+.+.. .|+++++.+ .+++..++++ +.+++.||+++++..
T Consensus 320 ~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~~--~Vtvv~r~~~~~~~~~~~e~-----~~~~~~Gv~~~~~~~ 392 (1025)
T 1gte_A 320 GMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGAR--RVFLVFRKGFVNIRAVPEEV-----ELAKEEKCEFLPFLS 392 (1025)
T ss_dssp TTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTCS--EEEEECSSCGGGCCSCHHHH-----HHHHHTTCEEECSEE
T ss_pred ccccccccccccCCcEEEECCChHHHHHHHHHHHcCCC--EEEEEEecChhhCCCCHHHH-----HHHHHcCCEEEeCCC
Confidence 00 00 0012256999999999999999999887642 299999987 4555554443 567889999999999
Q ss_pred eeEEeccccccccccCCCCCcccccccccCCCceEEee-ccccc------CCcceEEeccEEEEecCCCCC-CCCCCCCC
Q 009310 311 VRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILEL-QPAIK------GLESQIFEADLVLWTVGSKPL-LPHVEPPN 382 (538)
Q Consensus 311 V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~------~~~g~~l~~D~vI~a~G~~p~-~~~l~~~~ 382 (538)
+.++..+++.. .++++.. ...++ .++..++++|.||+|+|++|+ ..++...
T Consensus 393 ~~~i~~~~g~v--------------------~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~- 451 (1025)
T 1gte_A 393 PRKVIVKGGRI--------------------VAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEAL- 451 (1025)
T ss_dssp EEEEEEETTEE--------------------EEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHT-
T ss_pred ceEEEccCCeE--------------------EEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhcc-
Confidence 99987532110 1122210 00000 012357999999999999875 3444321
Q ss_pred CccCCCCcCCCCCeeeCC-CcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHC---CC-----C
Q 009310 383 NRLHDLPLNARGQAETDE-TLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIN---DR-----P 453 (538)
Q Consensus 383 ~~~~~~~l~~~G~i~vd~-~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~---~~-----~ 453 (538)
.+++++++|+|.||+ ++|| +.|+|||+|||+.. +.++..|+.||+.+|.+|.+.+. +. +
T Consensus 452 ---~gl~~~~~G~I~vd~~~~~T-s~~~VfA~GD~~~~--------~~~~~~A~~~G~~aA~~i~~~L~~~~~~~~~~~~ 519 (1025)
T 1gte_A 452 ---SPIKFNRWDLPEVDPETMQT-SEPWVFAGGDIVGM--------ANTTVESVNDGKQASWYIHKYIQAQYGASVSAKP 519 (1025)
T ss_dssp ---TTSCBCTTSSBCCCTTTCBC-SSTTEEECSGGGCS--------CCCHHHHHHHHHHHHHHHHHHHHHHTTCCCCSSC
T ss_pred ---cCceECCCCCEEECCCCCcc-CCCCEEEeCCCCCC--------chHHHHHHHHHHHHHHHHHHHHHhccCCCcccCc
Confidence 267888899999996 8998 99999999999986 67899999999999999998764 32 3
Q ss_pred CCCceec
Q 009310 454 LLPFRFQ 460 (538)
Q Consensus 454 ~~p~~~~ 460 (538)
..||+|.
T Consensus 520 ~~p~~~~ 526 (1025)
T 1gte_A 520 ELPLFYT 526 (1025)
T ss_dssp CBCCCCC
T ss_pred Ccccccc
Confidence 4577776
No 84
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.97 E-value=1.6e-30 Score=273.57 Aligned_cols=312 Identities=15% Similarity=0.136 Sum_probs=203.0
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (538)
.+++|+||||||||+++|..|++.+ ++++|+|||+++..+. ...+...++.....++...+.+++++.+++++.+
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g----~~~~V~vie~~~~~gg-~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~ 79 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHH----SRAHVDIYEKQLVPFG-LVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGN 79 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHC----SSCEEEEECSSSSSCT-HHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBS
T ss_pred CCceEEEECcCHHHHHHHHHHHhcC----CCCCEEEEeCCCcCCc-eeecccCCCCccHHHHHHHHHHHHHhCCcEEEee
Confidence 3479999999999999999999843 3489999999987532 2222222222233445556677777888988765
Q ss_pred eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCC-CCCCCCCccccCcCCCChHHHHHHHHHHHHHHH
Q 009310 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEP-KLDVVPGAAEFAFPFSTLEDACRVDRKLSELER 236 (538)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~-~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~ 236 (538)
... . + .+++++. .+.||+||+|||+.+ +.|++||.+.. .+.+..+.....+. ...
T Consensus 80 ~~v--~---~-------------~V~~~~~-~~~~d~lVlAtGs~~~~~~~ipG~~~~--gv~~~~~~~~~~~~---~~d 135 (460)
T 1cjc_A 80 VEV--G---R-------------DVTVQEL-QDAYHAVVLSYGAEDHQALDIPGEELP--GVFSARAFVGWYNG---LPE 135 (460)
T ss_dssp CCB--T---T-------------TBCHHHH-HHHSSEEEECCCCCEECCCCCTTTTST--TEEEHHHHHHHHTT---CGG
T ss_pred eEE--e---e-------------EEEeccc-eEEcCEEEEecCcCCCCCCCCCCCCCC--cEEEHHHHHHHhhc---Ccc
Confidence 311 1 1 1333333 468999999999995 78899997411 12222222211110 000
Q ss_pred hcc-C-CCCCCeEEEECCChhHHHHHHHHHHH----------------HHhcC--cEEEEecCCcc--------------
Q 009310 237 RNF-G-KDSLIRVAVVGCGYSGVELAATVSER----------------LEEKG--IVQAINVETTI-------------- 282 (538)
Q Consensus 237 ~~~-~-~~~~~~VvVVGgG~~g~E~A~~l~~~----------------~~~~~--~Vtlv~~~~~~-------------- 282 (538)
... . ...+++|+|||+|++|+|+|..|++. ....+ .|+++.+.+.+
T Consensus 136 ~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~~ 215 (460)
T 1cjc_A 136 NRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQ 215 (460)
T ss_dssp GTTCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHT
T ss_pred ccccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhhc
Confidence 000 0 11368999999999999999999831 11111 39999998765
Q ss_pred CCCCC-----h-------------h----hHHHHHHHHHh--------------CCCEEEcCceeeEEeccccc-ccccc
Q 009310 283 CPTGT-----P-------------G----NREAALKVLSA--------------RKVQLVLGYFVRCIRRVGEF-EASVK 325 (538)
Q Consensus 283 l~~~~-----~-------------~----~~~~~~~~l~~--------------~gV~v~~~~~V~~i~~~~~~-~~~~~ 325 (538)
++..+ . . ..+.+.+.+++ +||+++++..+.+|..++.. ..
T Consensus 216 lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v--- 292 (460)
T 1cjc_A 216 LPGTRPMLDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRA--- 292 (460)
T ss_dssp CTTEEEECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSE---
T ss_pred CCCceeEechhhhcchhhhhhhccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceE---
Confidence 22110 0 1 22333344545 89999999999999864210 00
Q ss_pred CCCCCcccccccccCCCceEEeecccc---------cCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCC-CcCCCCC
Q 009310 326 QPESGAIPNIAADKNSDKYILELQPAI---------KGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDL-PLNARGQ 395 (538)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~v~~~~~~~~---------~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~-~l~~~G~ 395 (538)
.++++....-. .+++.++++||+||+++|++|+. + . ++ +++++|+
T Consensus 293 ----------------~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~-l-~-------gl~~~d~~g~ 347 (460)
T 1cjc_A 293 ----------------AGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRP-I-D-------PSVPFDPKLG 347 (460)
T ss_dssp ----------------EEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCC-C-C-------TTSCCBTTTT
T ss_pred ----------------EEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCC-C-C-------CCcccccCCC
Confidence 22333210000 01133689999999999999995 3 1 56 7888899
Q ss_pred eeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHCCCC
Q 009310 396 AETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRP 453 (538)
Q Consensus 396 i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~~~~ 453 (538)
|.||+++|+.+.|+|||+|||+..+ ...+..|+.+|+.+|.||...+.+..
T Consensus 348 i~vn~~~rt~~~p~vya~Gd~~~g~-------~~~i~~a~~~g~~aa~~i~~~l~~~~ 398 (460)
T 1cjc_A 348 VVPNMEGRVVDVPGLYCSGWVKRGP-------TGVITTTMTDSFLTGQILLQDLKAGH 398 (460)
T ss_dssp BCCEETTEETTCTTEEECTHHHHCT-------TCCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred eeECCCCcCcCCCCEEEEEeCCcCC-------CccHHHHHHHHHHHHHHHHHHHHhCc
Confidence 9999999994479999999999741 23467899999999999999887644
No 85
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.96 E-value=1.6e-29 Score=266.84 Aligned_cols=280 Identities=15% Similarity=0.123 Sum_probs=186.5
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCE---EEEEcCCCCcccCcc-----------------hhhhh--------
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQ---VLLVDQSERFVFKPM-----------------LYELL-------- 130 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~---V~lie~~~~~~~~p~-----------------~~~~~-------- 130 (538)
.++|+|||||+||++||..|++.. ..|++ |+|||+++.+...-. ++..+
T Consensus 2 ~~~V~IIGaG~aGl~aA~~L~~~~---~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~ 78 (464)
T 2xve_A 2 ATRIAILGAGPSGMAQLRAFQSAQ---EKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKEC 78 (464)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHH---HTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGG
T ss_pred CCcEEEECccHHHHHHHHHHHhhh---hcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhh
Confidence 379999999999999999998721 03557 999999875321100 00000
Q ss_pred ----------------cCCCCCccccccHHHHhccCCcE--EE-EeeEEEEcCCCCcCcCCCceeecccEEEcCC---c-
Q 009310 131 ----------------SGEVDAWEIAPRFADLLANTGVQ--FF-KDRVKLLCPSDHLGVNGPMACTHGGTVLLES---G- 187 (538)
Q Consensus 131 ----------------~g~~~~~~~~~~~~~~~~~~~v~--~~-~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~---g- 187 (538)
........+...+.+++++.+++ +. ..+|+.++..... . ..+|++.+ +
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~----~-----~~~V~~~~~~~g~ 149 (464)
T 2xve_A 79 LEFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDS----Q-----TFTVTVQDHTTDT 149 (464)
T ss_dssp TCBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTT----T-----EEEEEEEETTTTE
T ss_pred cccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCC----C-----cEEEEEEEcCCCc
Confidence 00011112222344444455665 44 3588888654320 0 01344433 3
Q ss_pred -eEEEeeEEEEeCC--CCCCCCCCCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHH
Q 009310 188 -LIVEYDWLVLSLG--AEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVS 264 (538)
Q Consensus 188 -~~~~yD~lVlAtG--~~~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~ 264 (538)
..+.||+||+||| +.|+.|.+||.+++.....+..+...... ..+++|+|||+|.+|+|+|.+|+
T Consensus 150 ~~~~~~d~VVvAtG~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~~------------~~~k~VvVVG~G~sg~eiA~~l~ 217 (464)
T 2xve_A 150 IYSEEFDYVVCCTGHFSTPYVPEFEGFEKFGGRILHAHDFRDALE------------FKDKTVLLVGSSYSAEDIGSQCY 217 (464)
T ss_dssp EEEEEESEEEECCCSSSSBCCCCCBTTTTCCSEEEEGGGCCCGGG------------GTTSEEEEECCSTTHHHHHHHHH
T ss_pred eEEEEcCEEEECCCCCCCCccCCCCCcccCCceEEehhhhCCHhH------------cCCCEEEEEcCCCCHHHHHHHHH
Confidence 5789999999999 88999999997643111101111100000 01689999999999999999999
Q ss_pred HHHHhcCcEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCce
Q 009310 265 ERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKY 344 (538)
Q Consensus 265 ~~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 344 (538)
+.+.+ |+++++.+.+++..- ..||+++ ..|+++++ ++|
T Consensus 218 ~~g~~---V~li~~~~~~~~~~~------------~~~V~~~--~~V~~i~~-------------------------~~V 255 (464)
T 2xve_A 218 KYGAK---KLISCYRTAPMGYKW------------PENWDER--PNLVRVDT-------------------------ENA 255 (464)
T ss_dssp HTTCS---EEEEECSSCCCCCCC------------CTTEEEC--SCEEEECS-------------------------SEE
T ss_pred HhCCe---EEEEEECCCCCCCCC------------CCceEEc--CCeEEEeC-------------------------CEE
Confidence 88766 999999887665321 2478877 67778764 556
Q ss_pred EEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCeeeCC---CcccCCCCCEEEccccccccC
Q 009310 345 ILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQAETDE---TLCVKGHPRIFALGDSSALRD 421 (538)
Q Consensus 345 ~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~---~l~~~~~~~VfaiGD~~~~~~ 421 (538)
++. +|+++++|.||+|+|++|+.+++... .++.++++|++ ++. .+++ +.|+||++|||+..
T Consensus 256 ~~~--------dG~~i~~D~Vi~atG~~p~~~~l~~~----~gl~~~~~~~v-~~~~~~~~~t-~~p~i~aiGd~~~~-- 319 (464)
T 2xve_A 256 YFA--------DGSSEKVDAIILCTGYIHHFPFLNDD----LRLVTNNRLWP-LNLYKGVVWE-DNPKFFYIGMQDQW-- 319 (464)
T ss_dssp EET--------TSCEEECSEEEECCCBCCCCTTBCTT----TCCCCCSSSCC-SSEETTTEES-SSTTEEECSCSCCS--
T ss_pred EEC--------CCCEEeCCEEEECCCCCCCCCCcCcc----cccccCCCccc-ccccceEecC-CCCCEEEEeCcccc--
Confidence 664 67889999999999999999998752 25666666565 443 3455 89999999998863
Q ss_pred CCCCCCCccHHHHHHHHHHHHHHHHH
Q 009310 422 SSGRPLPATAQVAFQQADFAGWNLWA 447 (538)
Q Consensus 422 ~~~~~~~~~~~~A~~qg~~aa~~i~~ 447 (538)
..+..|..||+.+|++|.+
T Consensus 320 -------~~~~~a~~qa~~~a~~l~G 338 (464)
T 2xve_A 320 -------YSFNMFDAQAWYARDVIMG 338 (464)
T ss_dssp -------SCHHHHHHHHHHHHHHHTT
T ss_pred -------cchHHHHHHHHHHHHHHcC
Confidence 4678899999999999874
No 86
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.96 E-value=7.1e-29 Score=282.75 Aligned_cols=300 Identities=18% Similarity=0.122 Sum_probs=200.2
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchh--hhhcCCCCCccccccHHHHhcc-CCcEEE
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLY--ELLSGEVDAWEIAPRFADLLAN-TGVQFF 155 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~--~~~~g~~~~~~~~~~~~~~~~~-~~v~~~ 155 (538)
.+|||||||||||++||..|++ .|++|+|||+++.+....... ..+.+. ...+....+.+.+.. .+++++
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~------~G~~V~lie~~~~~GG~~~~~~k~~i~~~-~~~~~~~~~~~~l~~~~~v~~~ 200 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASR------SGARVMLLDERAEAGGTLLDTAGEQIDGM-DSSAWIEQVTSELAEAEETTHL 200 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSSGGGGGSSCCEETTE-EHHHHHHHHHHHHHHSTTEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHh------CCCcEEEEeCCCCCCceeccCCccccCCC-CHHHHHHHHHHHHhhcCCcEEE
Confidence 4789999999999999999998 678999999988765333310 111111 111112222233334 388888
Q ss_pred Ee-eEEEEcCCCCcC-cCCCceeecccEEEc------CCceEEEeeEEEEeCCCCCCCCCCCCccccCcCCCChHHHHHH
Q 009310 156 KD-RVKLLCPSDHLG-VNGPMACTHGGTVLL------ESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRV 227 (538)
Q Consensus 156 ~~-~v~~i~~~~~~~-~~~~~~~~~~~~v~~------~~g~~~~yD~lVlAtG~~~~~p~ipG~~~~~~~~~~~~d~~~~ 227 (538)
.+ +|..++...... ++. ......+.. +++..+.||+||||||+.|+.|++||.+.. .+.+..+..
T Consensus 201 ~~~~V~~i~~~~~~~~v~~---~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~~ipG~~~~--gv~~~~~~~-- 273 (965)
T 2gag_A 201 QRTTVFGSYDANYLIAAQR---RTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIVFENNDRP--GIMLAGAVR-- 273 (965)
T ss_dssp SSEEEEEEETTTEEEEEEE---CSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCCCCBTCCST--TEEEHHHHH--
T ss_pred eCCEEEeeecCCceeeeEe---ecccccccccccCCCCceEEEECCEEEECCCCccCCCCCCCCCCC--CEEEhHHHH--
Confidence 64 788776543210 000 000001111 123478999999999999999999997421 122222222
Q ss_pred HHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEEc
Q 009310 228 DRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVL 307 (538)
Q Consensus 228 ~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~ 307 (538)
..+... ...++++|+|||+|++|+|+|..|.+.+.+ |+++++.+.+++ . .+.+++.||++++
T Consensus 274 -~~l~~~-----~~~~gk~vvViGgG~~g~E~A~~L~~~G~~---Vtvv~~~~~~~~----~-----~~~l~~~GV~v~~ 335 (965)
T 2gag_A 274 -SYLNRY-----GVRAGARIAVATTNDSAYELVRELAATGGV---VAVIDARSSISA----A-----AAQAVADGVQVIS 335 (965)
T ss_dssp -HHHHTT-----CEESCSSEEEEESSTTHHHHHHHHGGGTCC---SEEEESCSSCCH----H-----HHHHHHTTCCEEE
T ss_pred -HHHHhc-----CCCCCCeEEEEcCCHHHHHHHHHHHHcCCc---EEEEECCCccch----h-----HHHHHhCCeEEEe
Confidence 222111 111257999999999999999999887665 999999887642 1 5678999999999
Q ss_pred CceeeEEecc--ccccccccCCCCCcccccccccCCCceEEeeccccc-CCcceEEeccEEEEecCCCCCCCCCCCCCCc
Q 009310 308 GYFVRCIRRV--GEFEASVKQPESGAIPNIAADKNSDKYILELQPAIK-GLESQIFEADLVLWTVGSKPLLPHVEPPNNR 384 (538)
Q Consensus 308 ~~~V~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~ 384 (538)
++.|.++..+ +.. .++++...+... ++.++++++|.||+++|.+|+++++..
T Consensus 336 ~~~v~~i~~~~~~~v---------------------~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~---- 390 (965)
T 2gag_A 336 GSVVVDTEADENGEL---------------------SAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQ---- 390 (965)
T ss_dssp TEEEEEEEECTTSCE---------------------EEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHHHHH----
T ss_pred CCEeEEEeccCCCCE---------------------EEEEEEeccccCCCCceEEEEcCEEEECCCcCcChHHHHh----
Confidence 9999999873 211 245554100000 012378999999999999999776532
Q ss_pred cCCCCcCCCCCeeeCCCccc----CCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHCC
Q 009310 385 LHDLPLNARGQAETDETLCV----KGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIND 451 (538)
Q Consensus 385 ~~~~~l~~~G~i~vd~~l~~----~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~~ 451 (538)
..|+|.+|++++. ++.|+|||+|||+.. +. ...|..||+.+|.||...+..
T Consensus 391 -------~~g~i~vd~~~~~~v~~ts~p~IyAaGD~a~~--------~~-l~~A~~~G~~aA~~i~~~lg~ 445 (965)
T 2gag_A 391 -------RQGKLDWDTTIHAFVPADAVANQHLAGAMTGR--------LD-TASALSTGAATGAAAATAAGF 445 (965)
T ss_dssp -------TTCCEEEETTTTEEEECSCCTTEEECGGGGTC--------CS-HHHHHHHHHHHHHHHHHHTTC
T ss_pred -------CCCcEEEcCcccccccCCCCCCEEEEEecCCc--------hh-HHHHHHHHHHHHHHHHHHcCC
Confidence 2478999998871 389999999999985 33 458999999999999988753
No 87
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.95 E-value=2.8e-28 Score=256.54 Aligned_cols=274 Identities=17% Similarity=0.135 Sum_probs=180.8
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCC--EEEEEcCCCCcc----cCcch-------------------------
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKP--QVLLVDQSERFV----FKPML------------------------- 126 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~--~V~lie~~~~~~----~~p~~------------------------- 126 (538)
+.++|+|||||+||+++|..|++ .|+ +|+|||+++... +.+..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~------~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~ 78 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLA------EKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALP 78 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT------TTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCC
T ss_pred CCCEEEEECccHHHHHHHHHHHh------cCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccC
Confidence 45899999999999999999998 677 999999986432 11100
Q ss_pred ------hhhhc-----------CCC---------CCccccccHHHHhccCCcEEE-EeeEEEEcCCCCcCcCCCceeecc
Q 009310 127 ------YELLS-----------GEV---------DAWEIAPRFADLLANTGVQFF-KDRVKLLCPSDHLGVNGPMACTHG 179 (538)
Q Consensus 127 ------~~~~~-----------g~~---------~~~~~~~~~~~~~~~~~v~~~-~~~v~~i~~~~~~~~~~~~~~~~~ 179 (538)
+..+. +.. ....+...+..+.+..+..+. ..+|+.++.....
T Consensus 79 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~----------- 147 (447)
T 2gv8_A 79 VYPSPLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGS----------- 147 (447)
T ss_dssp BCCCCCCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTE-----------
T ss_pred CccCchhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCe-----------
Confidence 00000 000 000111222333333333343 3578888654320
Q ss_pred cEEEcCC---ce---EEEeeEEEEeCCC--CCCCCCCCCcccc-------CcCCCChHHHHHHHHHHHHHHHhccCCCCC
Q 009310 180 GTVLLES---GL---IVEYDWLVLSLGA--EPKLDVVPGAAEF-------AFPFSTLEDACRVDRKLSELERRNFGKDSL 244 (538)
Q Consensus 180 ~~v~~~~---g~---~~~yD~lVlAtG~--~~~~p~ipG~~~~-------~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~ 244 (538)
..|++.+ |. .+.||+||+|||. .|+.|.+||++++ ......+.+...+ .+
T Consensus 148 ~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~~~---------------~~ 212 (447)
T 2gv8_A 148 WVVTYKGTKAGSPISKDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELF---------------VG 212 (447)
T ss_dssp EEEEEEESSTTCCEEEEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCGGGG---------------TT
T ss_pred EEEEEeecCCCCeeEEEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCChhhc---------------CC
Confidence 1354443 55 7999999999998 7888999997532 1111111111111 16
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccc
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASV 324 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~ 324 (538)
++|+|||+|++|+|+|.+|++.+.+. |+++++.+.+ +++.||++ +..|+++..++
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~--V~l~~r~~~~---------------l~~~~i~~--~~~v~~~~~~~------ 267 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHP--IYQSLLGGGD---------------IQNESLQQ--VPEITKFDPTT------ 267 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSS--EEEECTTCCS---------------CBCSSEEE--ECCEEEEETTT------
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCc--EEEEeCCCCc---------------CCCCCeEE--ecCeEEEecCC------
Confidence 79999999999999999998765432 9999997764 44567774 45778886432
Q ss_pred cCCCCCcccccccccCCCceEEeecccccCCcceE-EeccEEEEecCCCCCCCC-----CCCCCCccCCCCcCCCCCeee
Q 009310 325 KQPESGAIPNIAADKNSDKYILELQPAIKGLESQI-FEADLVLWTVGSKPLLPH-----VEPPNNRLHDLPLNARGQAET 398 (538)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~-l~~D~vI~a~G~~p~~~~-----l~~~~~~~~~~~l~~~G~i~v 398 (538)
+.|++. +|+. +++|.||+|+|++|++++ +.... ..+..++.+.+
T Consensus 268 -----------------~~v~~~--------dG~~~~~~D~vi~atG~~~~~~~l~~~~l~~~~-----~~i~~~~~~~~ 317 (447)
T 2gv8_A 268 -----------------REIYLK--------GGKVLSNIDRVIYCTGYLYSVPFPSLAKLKSPE-----TKLIDDGSHVH 317 (447)
T ss_dssp -----------------TEEEET--------TTEEECCCSEEEECCCBCCCCCCHHHHSCCSTT-----TCCCSSSSSCC
T ss_pred -----------------CEEEEC--------CCCEeccCCEEEECCCCCcCCCCCccccccccc-----CceecCCCccc
Confidence 456554 5665 799999999999999999 76431 12223455666
Q ss_pred CCCccc--CCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHH
Q 009310 399 DETLCV--KGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWA 447 (538)
Q Consensus 399 d~~l~~--~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~ 447 (538)
+.+.++ .+.|+||++||+... ..+..|..||+.+|++|.+
T Consensus 318 ~~~~~v~~~~~p~l~~~G~~~~~---------~~~~~a~~qa~~~a~~~~g 359 (447)
T 2gv8_A 318 NVYQHIFYIPDPTLAFVGLALHV---------VPFPTSQAQAAFLARVWSG 359 (447)
T ss_dssp SEETTTEETTCTTEEESSCCBSS---------CHHHHHHHHHHHHHHHHTT
T ss_pred ccccccccCCCCcEEEEeccccc---------cCchHHHHHHHHHHHHHcC
Confidence 655553 488999999999874 3788899999999999974
No 88
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.95 E-value=1.3e-28 Score=261.89 Aligned_cols=262 Identities=15% Similarity=0.142 Sum_probs=182.6
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhh-hhcCCC-CCccccccHHHHhccCCcEEEE
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYE-LLSGEV-DAWEIAPRFADLLANTGVQFFK 156 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~-~~~g~~-~~~~~~~~~~~~~~~~~v~~~~ 156 (538)
.+||||||||+||+++|.+|++ . ++|+|||+++++.+...... ...+.. ...++...+.+.+ ..+++++.
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~------~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~ 179 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQ------Y-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYL 179 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTT------T-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEET
T ss_pred cCCEEEECccHHHHHHHHHHHh------c-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEc
Confidence 4689999999999999999998 5 79999999987655432111 011100 1122222223333 45777765
Q ss_pred -eeEEEEcCCCCcCcCCCceeecccEEEc-CCce--EEEeeEEEEeCCCCCCCCCCCCccccCcCCCChHHHHHHHHHHH
Q 009310 157 -DRVKLLCPSDHLGVNGPMACTHGGTVLL-ESGL--IVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLS 232 (538)
Q Consensus 157 -~~v~~i~~~~~~~~~~~~~~~~~~~v~~-~~g~--~~~yD~lVlAtG~~~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~ 232 (538)
..+..++.+.+. ..+.. +++. .+.||+||+|||+.|+.|++||.+.. .+.+..++..+.+.
T Consensus 180 ~~~v~~i~~~~~~-----------~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~~~~g~~~~--gv~~~~~~~~~~~~-- 244 (493)
T 1y56_A 180 ETSALGVFDKGEY-----------FLVPVVRGDKLIEILAKRVVLATGAIDSTMLFENNDMP--GVFRRDFALEVMNV-- 244 (493)
T ss_dssp TEEECCCEECSSS-----------EEEEEEETTEEEEEEESCEEECCCEEECCCCCTTTTST--TEEEHHHHHHHHHT--
T ss_pred CCEEEEEEcCCcE-----------EEEEEecCCeEEEEECCEEEECCCCCccCCCCCCCCCC--CEEEcHHHHHHHHh--
Confidence 467777655432 01211 3333 68999999999999999999987421 12234444332221
Q ss_pred HHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEEcCceee
Q 009310 233 ELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVR 312 (538)
Q Consensus 233 ~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~ 312 (538)
....++++++|||+|++|+| +.+++.||++++++.|.
T Consensus 245 ------~~~~~~~~vvViGgG~~gle-------------------------------------~~l~~~GV~v~~~~~v~ 281 (493)
T 1y56_A 245 ------WEVAPGRKVAVTGSKADEVI-------------------------------------QELERWGIDYVHIPNVK 281 (493)
T ss_dssp ------SCBCSCSEEEEESTTHHHHH-------------------------------------HHHHHHTCEEEECSSEE
T ss_pred ------cccCCCCEEEEECCCHHHHH-------------------------------------HHHHhCCcEEEeCCeeE
Confidence 01123589999999999988 45677899999999999
Q ss_pred EEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcCC
Q 009310 313 CIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNA 392 (538)
Q Consensus 313 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~ 392 (538)
++..++.. ..+++. +++++++|.||+++|.+|+++++...+. .+.+++
T Consensus 282 ~i~~~~~v---------------------~~v~~~--------~g~~i~aD~Vv~a~G~~p~~~l~~~~g~---~~~~~~ 329 (493)
T 1y56_A 282 RVEGNEKV---------------------ERVIDM--------NNHEYKVDALIFADGRRPDINPITQAGG---KLRFRR 329 (493)
T ss_dssp EEECSSSC---------------------CEEEET--------TCCEEECSEEEECCCEEECCHHHHHTTC---CEEEET
T ss_pred EEecCCce---------------------EEEEeC--------CCeEEEeCEEEECCCcCcCchHHHhcCC---CccccC
Confidence 99875411 223322 6789999999999999999877764431 223356
Q ss_pred CCCee-eCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHH
Q 009310 393 RGQAE-TDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAI 449 (538)
Q Consensus 393 ~G~i~-vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l 449 (538)
+|+|. ||++++ +.|+||++|||+.. ..+..|..||+.+|.||...+
T Consensus 330 ~g~i~~vd~~~~--s~~~vya~GD~~~~---------~~~~~A~~~g~~aa~~i~~~l 376 (493)
T 1y56_A 330 GYYSPVLDEYHR--IKDGIYVAGSAVSI---------KPHYANYLEGKLVGAYILKEF 376 (493)
T ss_dssp TEEEECCCTTSE--EETTEEECSTTTCC---------CCHHHHHHHHHHHHHHHHHHT
T ss_pred CceeeccccccC--cCCCEEEEeccCCc---------cCHHHHHHHHHHHHHHHHHHc
Confidence 88887 899999 78999999999984 578899999999999999876
No 89
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.94 E-value=8.2e-28 Score=257.68 Aligned_cols=302 Identities=16% Similarity=0.193 Sum_probs=194.3
Q ss_pred CCCeEEEECCcHHHHHHHHHhh-hcccCCCCCCEEEEEcCCCCcccCcch----------hhhhc------------CC-
Q 009310 78 KKPRICILGGGFGGLYTALRLE-SLVWQDDKKPQVLLVDQSERFVFKPML----------YELLS------------GE- 133 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~-~~~~~~~~g~~V~lie~~~~~~~~p~~----------~~~~~------------g~- 133 (538)
+.++|||||||+||+++|..|+ + .|++|+|||+++.+...... +...- +.
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~------~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~ 80 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHE------LGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWK 80 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHc------CCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCc
Confidence 3479999999999999999999 6 67899999998654311100 00000 00
Q ss_pred ---CCCccccccHHHHhccCCc--EEEE-eeEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCC--CCCCC
Q 009310 134 ---VDAWEIAPRFADLLANTGV--QFFK-DRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLG--AEPKL 205 (538)
Q Consensus 134 ---~~~~~~~~~~~~~~~~~~v--~~~~-~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG--~~~~~ 205 (538)
....++...+....++.++ .+.. .+|++++.+... ....|.+++|+.+.||+||+||| +.|+.
T Consensus 81 ~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~---------~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~ 151 (540)
T 3gwf_A 81 TTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDE---------NLWEVTTDHGEVYRAKYVVNAVGLLSAINF 151 (540)
T ss_dssp BSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTT---------TEEEEEETTSCEEEEEEEEECCCSCCSBCC
T ss_pred ccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCC---------CEEEEEEcCCCEEEeCEEEECCcccccCCC
Confidence 0112233334455556665 4444 478887654320 01257788888899999999999 68999
Q ss_pred CCCCCccccCcC-CCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCc-cC
Q 009310 206 DVVPGAAEFAFP-FSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT-IC 283 (538)
Q Consensus 206 p~ipG~~~~~~~-~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~-~l 283 (538)
|++||++++... +.+...... ....+++|+|||+|.+|+|+|.+|++.+.+ |+++++.+. ++
T Consensus 152 p~ipG~~~f~g~~~~~~~~~~~-------------~~~~~krV~VIG~G~sgve~a~~l~~~~~~---Vtv~~r~~~~i~ 215 (540)
T 3gwf_A 152 PNLPGLDTFEGETIHTAAWPEG-------------KSLAGRRVGVIGTGSTGQQVITSLAPEVEH---LTVFVRTPQYSV 215 (540)
T ss_dssp CCCTTGGGCCSEEEEGGGCCSS-------------CCCTTSEEEEECCSHHHHHHHHHHTTTCSE---EEEEESSCCCEE
T ss_pred CCCCCccccCCCEEEeecCCCc-------------cccccceEEEECCCchHHHHHHHHHhhCCE---EEEEECCCCccc
Confidence 999998653211 111000000 011268999999999999999999887655 999999887 45
Q ss_pred CCCChhhHHHHHHHH-----------------------------------------------------------------
Q 009310 284 PTGTPGNREAALKVL----------------------------------------------------------------- 298 (538)
Q Consensus 284 ~~~~~~~~~~~~~~l----------------------------------------------------------------- 298 (538)
+..++.+.....+.|
T Consensus 216 p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 295 (540)
T 3gwf_A 216 PVGNRPVNPEQIAEIKADYDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAA 295 (540)
T ss_dssp ECCCCBCCHHHHHHHHHTHHHHHHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHH
T ss_pred cCccCCCCHHHHHHHHhccHHHHHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHH
Confidence 544332222211111
Q ss_pred ---------------------------------------------HhCCCEEEc--CceeeEEeccccccccccCCCCCc
Q 009310 299 ---------------------------------------------SARKVQLVL--GYFVRCIRRVGEFEASVKQPESGA 331 (538)
Q Consensus 299 ---------------------------------------------~~~gV~v~~--~~~V~~i~~~~~~~~~~~~~~~~~ 331 (538)
.+.+|+++. ...|++|++
T Consensus 296 ~~~~~~~~~~~~~~~v~dp~~~~~l~P~~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~--------------- 360 (540)
T 3gwf_A 296 NEAAASFIRAKVAEIIEDPETARKLMPKGLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTA--------------- 360 (540)
T ss_dssp HHHHHHHHHHHHHHHCCSHHHHHHHCCCSCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECS---------------
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHhCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEec---------------
Confidence 134777775 667777776
Q ss_pred ccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCc-cCCCCcCC--CCCeeeCCCcccCCCC
Q 009310 332 IPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNR-LHDLPLNA--RGQAETDETLCVKGHP 408 (538)
Q Consensus 332 ~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~-~~~~~l~~--~G~i~vd~~l~~~~~~ 408 (538)
++|++. +|+++++|+||+|||+++++.++...... ..|..+++ .+.+.....+.++++|
T Consensus 361 ----------~gv~~~--------dG~~~~~DvIV~ATGf~~~~~~~~~~~i~g~~G~~l~~~w~~~~~~y~g~~v~gfP 422 (540)
T 3gwf_A 361 ----------KGVVTE--------DGVLHELDVLVFATGFDAVDGNYRRIEIRGRDGLHINDHWDGQPTSYLGVSTANFP 422 (540)
T ss_dssp ----------SEEEET--------TCCEEECSEEEECCCBSCSSHHHHTSEEECGGGCBHHHHTSSSCCCBTTTBCTTCT
T ss_pred ----------CeEEcC--------CCCEEECCEEEECCccCccccCcCcceEECCCCcCHHHhhccChhhccccccCCCC
Confidence 566664 88999999999999999986444332110 11233322 1334444556778999
Q ss_pred CEEEc-cccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHCC
Q 009310 409 RIFAL-GDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIND 451 (538)
Q Consensus 409 ~Vfai-GD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~~ 451 (538)
|+|.+ |..+.. ......+..|++++++.|.....+
T Consensus 423 N~f~~~Gp~~~~--------~s~~~~~e~q~~~i~~~i~~~~~~ 458 (540)
T 3gwf_A 423 NWFMVLGPNGPF--------TNLPPSIETQVEWISDTIGYAERN 458 (540)
T ss_dssp TEEESSCSSCBC--------SCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ceEEEecCCCCC--------ccHHHHHHHHHHHHHHHHHHHHHC
Confidence 99999 766542 345677889999999988765543
No 90
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.92 E-value=1.8e-25 Score=240.00 Aligned_cols=172 Identities=19% Similarity=0.203 Sum_probs=115.9
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC-------cc-------hhhhh------------c
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK-------PM-------LYELL------------S 131 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~-------p~-------~~~~~------------~ 131 (538)
+.++|||||||+||+++|..|++ .|++|+|||+++.+... .. .+.+. .
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~------~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~ 93 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRS------QGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSE 93 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSS
T ss_pred CCCCEEEECchHHHHHHHHHHHh------CCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCcc
Confidence 45799999999999999999998 67899999997643211 00 00000 0
Q ss_pred CCCCCccccccHHHHhccCCc--EEEE-eeEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCC--CCCCCC
Q 009310 132 GEVDAWEIAPRFADLLANTGV--QFFK-DRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLG--AEPKLD 206 (538)
Q Consensus 132 g~~~~~~~~~~~~~~~~~~~v--~~~~-~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG--~~~~~p 206 (538)
......++...+.+..++.++ .+.. .+|++++.+... ....|.+++|.++.||+||+||| +.|..|
T Consensus 94 ~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~---------~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~p 164 (549)
T 4ap3_A 94 KYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEG---------LRWTVRTDRGDEVSARFLVVAAGPLSNANTP 164 (549)
T ss_dssp SSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTT---------TEEEEEETTCCEEEEEEEEECCCSEEECCCC
T ss_pred CCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCC---------CEEEEEECCCCEEEeCEEEECcCCCCCCCCC
Confidence 001112333344555556665 4443 478888654321 01257788888899999999999 789999
Q ss_pred CCCCccccCcC-CCCh--H-HHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCcc
Q 009310 207 VVPGAAEFAFP-FSTL--E-DACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTI 282 (538)
Q Consensus 207 ~ipG~~~~~~~-~~~~--~-d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~ 282 (538)
++||++++... +.+. . +... ..+++|+|||+|.+|+|+|.+|++.+.+ |+++++.+.+
T Consensus 165 ~ipG~~~f~g~~~~~~~~~~~~~~---------------~~~krV~VIG~G~sgve~a~~l~~~~~~---Vtv~~r~~~~ 226 (549)
T 4ap3_A 165 AFDGLDRFTGDIVHTARWPHDGVD---------------FTGKRVGVIGTGSSGIQSIPIIAEQAEQ---LFVFQRSANY 226 (549)
T ss_dssp CCTTGGGCCSEEEEGGGCCTTCCC---------------CBTCEEEEECCSHHHHHHHHHHHHHBSE---EEEEESSCCC
T ss_pred CCCCcccCCCceEEeccccccccc---------------cCCCEEEEECCCchHHHHHHHHHhhCCE---EEEEECCCCc
Confidence 99998654211 1111 0 1110 1268999999999999999999988766 9999998873
No 91
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.92 E-value=1.3e-25 Score=240.83 Aligned_cols=184 Identities=18% Similarity=0.211 Sum_probs=112.3
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcc--------------hhhh--hcC---------
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM--------------LYEL--LSG--------- 132 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~--------------~~~~--~~g--------- 132 (538)
..++|||||||+||+++|..|++ .|++|+|||+++.+...-. .+.+ ...
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~------~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~ 81 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQ------AGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSE 81 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSB
T ss_pred CCCCEEEECccHHHHHHHHHHHh------CCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccc
Confidence 45799999999999999999998 6789999999875321100 0000 000
Q ss_pred -CCCCccccccHHHHhccCCc--EEE-EeeEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCC--CCCCCC
Q 009310 133 -EVDAWEIAPRFADLLANTGV--QFF-KDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLG--AEPKLD 206 (538)
Q Consensus 133 -~~~~~~~~~~~~~~~~~~~v--~~~-~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG--~~~~~p 206 (538)
.....++...+....++.++ .+. ..+|+.++.+... ....|.+++|+++.||+||+||| +.|+.|
T Consensus 82 ~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~---------~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~p 152 (545)
T 3uox_A 82 NFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVEND---------RLWEVTLDNEEVVTCRFLISATGPLSASRMP 152 (545)
T ss_dssp SSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGG---------TEEEEEETTTEEEEEEEEEECCCSCBC---C
T ss_pred cCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCC---------CEEEEEECCCCEEEeCEEEECcCCCCCCcCC
Confidence 01112333334444444444 333 3477777543320 01267888888999999999999 889999
Q ss_pred CCCCccccCcC-CCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCc-cCC
Q 009310 207 VVPGAAEFAFP-FSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT-ICP 284 (538)
Q Consensus 207 ~ipG~~~~~~~-~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~-~l~ 284 (538)
++||++++... +.+........ .. .......+++|+|||+|.+|+|+|.+|++.+.+ |+++++.+. +++
T Consensus 153 ~ipG~~~f~g~~~h~~~~~~~~~-~~-----~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~---Vtv~~r~~~~i~p 223 (545)
T 3uox_A 153 DIKGIDSFKGESFHSSRWPTDAE-GA-----PKGVDFTGKRVGVIGTGATGVQIIPIAAETAKE---LYVFQRTPNWCTP 223 (545)
T ss_dssp CCTTGGGCCSEEEEGGGCCBCTT-SC-----BSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSE---EEEEESSCCCCEE
T ss_pred CCCCccccCCCeEEccccccccc-cc-----ccccccCCCeEEEECCCccHHHHHHHHHhhCCE---EEEEEcCCCcccc
Confidence 99998653210 11100000000 00 000011268999999999999999999887655 999999887 344
Q ss_pred C
Q 009310 285 T 285 (538)
Q Consensus 285 ~ 285 (538)
.
T Consensus 224 ~ 224 (545)
T 3uox_A 224 L 224 (545)
T ss_dssp C
T ss_pred C
Confidence 3
No 92
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.91 E-value=1.6e-24 Score=233.23 Aligned_cols=175 Identities=21% Similarity=0.244 Sum_probs=109.5
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC------cc--------------hhhhh-----cC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK------PM--------------LYELL-----SG 132 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~------p~--------------~~~~~-----~g 132 (538)
..++|+|||||++|+++|..|++ .|++|+|||+++.+... |. .+... ..
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~------~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~ 88 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRE------LGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTE 88 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCB
T ss_pred CCCCEEEECccHHHHHHHHHHHh------CCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCccc
Confidence 35799999999999999999998 67899999998754210 10 00000 00
Q ss_pred -CCCCccccccHHHHhccCC--cEEEE-eeEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCC--CCCCCC
Q 009310 133 -EVDAWEIAPRFADLLANTG--VQFFK-DRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLG--AEPKLD 206 (538)
Q Consensus 133 -~~~~~~~~~~~~~~~~~~~--v~~~~-~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG--~~~~~p 206 (538)
.....++...+....++.+ ..+.. .+|++++.+... ....|.+++|.++.+|+||+||| +.|..|
T Consensus 89 ~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~---------~~w~V~~~~G~~~~ad~vV~AtG~~s~p~~p 159 (542)
T 1w4x_A 89 RYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEAT---------NTWTVDTNHGDRIRARYLIMASGQLSVPQLP 159 (542)
T ss_dssp SSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTT---------TEEEEEETTCCEEEEEEEEECCCSCCCCCCC
T ss_pred ccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCC---------CeEEEEECCCCEEEeCEEEECcCCCCCCCCC
Confidence 0001112222333333433 23333 477777543210 01257777888899999999999 568889
Q ss_pred CCCCccccCcC-CCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCcc
Q 009310 207 VVPGAAEFAFP-FSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTI 282 (538)
Q Consensus 207 ~ipG~~~~~~~-~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~ 282 (538)
.+||++++... +.+..... +. ....+++|+|||+|.+|+|++.++++.+.+ |+++.+.+.+
T Consensus 160 ~i~G~~~f~G~~~hs~~~~~---~~---------~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~---vtv~~r~~~~ 221 (542)
T 1w4x_A 160 NFPGLKDFAGNLYHTGNWPH---EP---------VDFSGQRVGVIGTGSSGIQVSPQIAKQAAE---LFVFQRTPHF 221 (542)
T ss_dssp CCTTGGGCCSEEEEGGGCCS---SC---------CCCBTCEEEEECCSHHHHHHHHHHHHHBSE---EEEEESSCCC
T ss_pred CCCCcccCCCceEECCCCCC---ch---------hccCCCEEEEECCCccHHHHHHHHhhcCce---EEEEEcCCcc
Confidence 99998643210 11100000 00 001268999999999999999999988665 9999987765
No 93
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.87 E-value=9.4e-22 Score=180.28 Aligned_cols=163 Identities=20% Similarity=0.215 Sum_probs=134.1
Q ss_pred eEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCC---------CC-----ChhhHHHHHHHHHhCCCEEEcCcee
Q 009310 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICP---------TG-----TPGNREAALKVLSARKVQLVLGYFV 311 (538)
Q Consensus 246 ~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~---------~~-----~~~~~~~~~~~l~~~gV~v~~~~~V 311 (538)
+|+|||||++|+|+|..|++.+.+ |+++++.+.++. .+ ++.+.+.+.+.+++.||+++.+ +|
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~---v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v 78 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLK---VLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VV 78 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC---EEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CC
T ss_pred eEEEECCCHHHHHHHHHHHHCCCc---EEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EE
Confidence 799999999999999999987655 999999876652 23 3567788889999999999999 99
Q ss_pred eEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcC
Q 009310 312 RCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLN 391 (538)
Q Consensus 312 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~ 391 (538)
++++.++ +.+.+.+. ++ ++++|.||+|+|.+|+. .. ..+++++
T Consensus 79 ~~i~~~~-----------------------~~~~v~~~------~g-~i~ad~vI~A~G~~~~~--~~-----~~g~~~~ 121 (180)
T 2ywl_A 79 KGVRDMG-----------------------GVFEVETE------EG-VEKAERLLLCTHKDPTL--PS-----LLGLTRR 121 (180)
T ss_dssp CEEEECS-----------------------SSEEEECS------SC-EEEEEEEEECCTTCCHH--HH-----HHTCCEE
T ss_pred EEEEEcC-----------------------CEEEEEEC------CC-EEEECEEEECCCCCCCc--cc-----cCCCCcc
Confidence 9998754 34555432 45 79999999999999863 22 2357788
Q ss_pred CCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHCCCCCCCce
Q 009310 392 ARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLLPFR 458 (538)
Q Consensus 392 ~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~~~~~~p~~ 458 (538)
+|+|.||+++|+ +.|+|||+|||+..+ .+.+..|.+||+.+|.||.+.+++++..+|+
T Consensus 122 -~g~i~vd~~~~t-~~~~i~a~GD~~~~~-------~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~ 179 (180)
T 2ywl_A 122 -GAYIDTDEGGRT-SYPRVYAAGVARGKV-------PGHAIISAGDGAYVAVHLVSDLRGEPYKDHA 179 (180)
T ss_dssp -TTEECCCTTCBC-SSTTEEECGGGGTCC-------SCCHHHHHHHHHHHHHHHHHHHHTSCCCCCC
T ss_pred -CceEEeCCCCCc-CCCCEEEeecccCcc-------hhhHHHHHHhHHHHHHHHHHHhhhccccccC
Confidence 899999999999 999999999999862 2388999999999999999999888776664
No 94
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.82 E-value=8.5e-19 Score=186.43 Aligned_cols=336 Identities=12% Similarity=0.102 Sum_probs=177.0
Q ss_pred CCCCCCCeEEEECCcHHHHHHHHHhhhcccC--------CCCCCEEEEEcCCCCcccCcch--hhh------hcCCC---
Q 009310 74 WPDKKKPRICILGGGFGGLYTALRLESLVWQ--------DDKKPQVLLVDQSERFVFKPML--YEL------LSGEV--- 134 (538)
Q Consensus 74 ~~~~~~~~VVIIGgG~AGl~aA~~L~~~~~~--------~~~g~~V~lie~~~~~~~~p~~--~~~------~~g~~--- 134 (538)
.+....+||||||+||+||++|..|.+.+.+ ...+...+.+|+.+.+.|++.. +.. +....
T Consensus 34 tp~~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~ 113 (501)
T 4b63_A 34 TPQDELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLR 113 (501)
T ss_dssp CCTTSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTT
T ss_pred CCCCCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhcccc
Confidence 4445568999999999999999999875421 1134578899999887776532 110 00000
Q ss_pred -----------------------------CCccccccHHHHhccCCcEEEE-eeEEEEcCCCCcCcCCCceeecccEEEc
Q 009310 135 -----------------------------DAWEIAPRFADLLANTGVQFFK-DRVKLLCPSDHLGVNGPMACTHGGTVLL 184 (538)
Q Consensus 135 -----------------------------~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~~~~~~~~~~~~v~~ 184 (538)
...++..+++.+.++.+..+.. .+|+++........... ...++|++
T Consensus 114 ~P~s~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~---~~~~~V~~ 190 (501)
T 4b63_A 114 DPRSSFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSV---VDFFTVRS 190 (501)
T ss_dssp CTTCTTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSC---BCEEEEEE
T ss_pred CCCCccchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccc---cceEEEEE
Confidence 0011222233333344333332 46777654322100000 01124444
Q ss_pred CC-----ceEEEeeEEEEeCCCCCCCCCCCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHH
Q 009310 185 ES-----GLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVEL 259 (538)
Q Consensus 185 ~~-----g~~~~yD~lVlAtG~~~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~ 259 (538)
.+ ...+.++.||+|||..|.+|..++....+++ + .+...-.+.+ ......+|+|+|||+|.+|+|+
T Consensus 191 ~~~~~g~~~~~~ar~vVlatG~~P~iP~~~~~~g~v~H--s-s~y~~~~~~~------~~~~~~gKrV~VVG~G~SA~ei 261 (501)
T 4b63_A 191 RNVETGEISARRTRKVVIAIGGTAKMPSGLPQDPRIIH--S-SKYCTTLPAL------LKDKSKPYNIAVLGSGQSAAEI 261 (501)
T ss_dssp EETTTCCEEEEEEEEEEECCCCEECCCTTSCCCTTEEE--G-GGHHHHHHHH------SCCTTSCCEEEEECCSHHHHHH
T ss_pred ecCCCceEEEEEeCEEEECcCCCCCCCCCCCCCcceee--c-cccccchhhc------cccccCCcEEEEECCcHHHHHH
Confidence 32 2478999999999988777765543222221 1 1111111111 0112237899999999999999
Q ss_pred HHHHHHHHHhcCcEEEEecCCccCCCC---------ChhhH-----------HHH--------------------HHHH-
Q 009310 260 AATVSERLEEKGIVQAINVETTICPTG---------TPGNR-----------EAA--------------------LKVL- 298 (538)
Q Consensus 260 A~~l~~~~~~~~~Vtlv~~~~~~l~~~---------~~~~~-----------~~~--------------------~~~l- 298 (538)
+.+|++.... ..|+++.|.+.+.+.. .+... ..+ .+.+
T Consensus 262 ~~~L~~~~~~-~~v~~~~R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~y 340 (501)
T 4b63_A 262 FHDLQKRYPN-SRTTLIMRDSAMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIYNDMY 340 (501)
T ss_dssp HHHHHHHSTT-CEEEEECSSSSCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHhcCCC-ceEEEEeCCCccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHHH
Confidence 9999876332 2399999987654421 11111 111 0011
Q ss_pred ----H-----hCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEec
Q 009310 299 ----S-----ARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTV 369 (538)
Q Consensus 299 ----~-----~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~ 369 (538)
. .....+..+..+..+...... ..+.+.+... ..+.+++.+ ++|+++++|.||+||
T Consensus 341 ~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~------~~~~v~~~~~-~~~~~~v~~--------~dg~~~~~D~VI~AT 405 (501)
T 4b63_A 341 LQRVKNPDETQWQHRILPERKITRVEHHGPQ------SRMRIHLKSS-KPESEGAAN--------DVKETLEVDALMVAT 405 (501)
T ss_dssp HHHHHCSCGGGCSSEEECSEEEEEEECCSSS------SCEEEEEEES-CC----------------CCCEEEESEEEECC
T ss_pred hhccCCCcccccceeecCCcceeeeeecCCC------CeEEEEeeee-EEeCCeeEe--------CCCeEEECCEEEECc
Confidence 0 112356666666666543211 0001100000 000112222 378899999999999
Q ss_pred CCCCCCC-CCCCCCCccCCCCcCCCCCeeeCCCcccC-------CCCCEEEccccccccCCCCCCCCccHHHHHHHHHHH
Q 009310 370 GSKPLLP-HVEPPNNRLHDLPLNARGQAETDETLCVK-------GHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFA 441 (538)
Q Consensus 370 G~~p~~~-~l~~~~~~~~~~~l~~~G~i~vd~~l~~~-------~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~a 441 (538)
|++++.+ ++... ...+..|..|++.|+..+++. ..++||+.|-+-..+ |-.-|.+...|.+.|+++
T Consensus 406 Gy~~~~p~~L~~~---~~~l~~d~~g~~~v~rdy~~~~~~~~~~~~~~i~~qg~~~~th---G~~~~~Ls~~a~R~~~I~ 479 (501)
T 4b63_A 406 GYNRNAHERLLSK---VQHLRPTGQDQWKPHRDYRVEMDPSKVSSEAGIWLQGCNERTH---GLSDSLLSVLAVRGGEMV 479 (501)
T ss_dssp CEECCTHHHHTGG---GGGGSSTTCCSCCBCTTSBBCCCTTTBCTTCEEEECSCCHHHH---CTTTTSSTTHHHHHHHHH
T ss_pred CCCCCCcchhcch---hhhcCcCcCCCeeeCCCcEEeecCCccCCCceEEecCCCcccC---CcchhhHHHHHHHHHHHH
Confidence 9998853 22111 113456778888998877652 235699999554321 212244555677777654
Q ss_pred HH
Q 009310 442 GW 443 (538)
Q Consensus 442 a~ 443 (538)
..
T Consensus 480 ~~ 481 (501)
T 4b63_A 480 QS 481 (501)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 95
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.50 E-value=2.8e-15 Score=158.10 Aligned_cols=229 Identities=14% Similarity=0.038 Sum_probs=119.7
Q ss_pred HHHhccCCcEEEEe-eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCCCCCCccccCcCCCChH
Q 009310 144 ADLLANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLE 222 (538)
Q Consensus 144 ~~~~~~~~v~~~~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p~ipG~~~~~~~~~~~~ 222 (538)
.+.+++.+++++.+ .+ ++..+... +.+..+..+++ .+.+|.||+|||+.+..+.++.-. ...+-
T Consensus 126 ~~~~~~~gv~i~~~~~v-~l~~~~~~--------v~Gv~v~~~~g-~~~a~~VVlAtGg~~~~~~~~~~~----~~~tG- 190 (472)
T 2e5v_A 126 LKLAREEGIPIIEDRLV-EIRVKDGK--------VTGFVTEKRGL-VEDVDKLVLATGGYSYLYEYSSTQ----STNIG- 190 (472)
T ss_dssp HHHHHHTTCCEECCCEE-EEEEETTE--------EEEEEETTTEE-ECCCSEEEECCCCCGGGSSSBSSC----TTCSC-
T ss_pred HHHHHhCCCEEEECcEE-EEEEeCCE--------EEEEEEEeCCC-eEEeeeEEECCCCCcccCccccCC----CCCch-
Confidence 33345568888876 47 77543221 00001222333 577999999999987655432110 11122
Q ss_pred HHHHHHHH----HHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCCChhh--------
Q 009310 223 DACRVDRK----LSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGN-------- 290 (538)
Q Consensus 223 d~~~~~~~----l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~-------- 290 (538)
|...+... +..++.-+ . ...++++|+| +++++..+...+. +.+....+++++.+++..
T Consensus 191 dgi~~a~~aGa~~~d~e~~q---~-~p~~~~~ggg--~~~~ae~~~~~G~----~~v~~~g~rf~~~~~~~~el~~rd~v 260 (472)
T 2e5v_A 191 DGMAIAFKAGTILADMEFVQ---F-HPTVTSLDGE--VFLLTETLRGEGA----QIINENGERFLFNYDKRGELAPRDIL 260 (472)
T ss_dssp HHHHHHHHTTCCEECTTCEE---E-EEEEECGGGC--CEECCTHHHHTTC----EEEETTCCCGGGGTCTTGGGSCHHHH
T ss_pred HHHHHHHHcCCCEeCCcceE---E-EeEEEccCCC--ceeeehhhcCCce----EEECCCCCCCCccCCcccCcCchhHH
Confidence 21111111 00000000 0 0133455666 7777776654332 447778888887665543
Q ss_pred HHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEe-ccEEEEec
Q 009310 291 REAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFE-ADLVLWTV 369 (538)
Q Consensus 291 ~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~-~D~vI~a~ 369 (538)
...+.+.+++.|. ++++.. .+ .. + .+.++ .|.++++.
T Consensus 261 ~~~i~~~~~~~~~-v~ld~~--~~---------------------------~~--~----------~~~~~~~~~~~~~~ 298 (472)
T 2e5v_A 261 SRAIYIEMLKGHK-VFIDLS--KI---------------------------ED--F----------ERKFPVVAKYLARH 298 (472)
T ss_dssp HHHHHHHHHHTCC-EEEECT--TC---------------------------TT--H----------HHHCHHHHHHHHHT
T ss_pred HHHHHHHHHhCCc-EEEecc--ch---------------------------HH--H----------HHHhHHHHHHHHHh
Confidence 5556666766653 222110 00 00 0 01122 46677888
Q ss_pred CCCCCCCCCCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHH
Q 009310 370 GSKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAI 449 (538)
Q Consensus 370 G~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l 449 (538)
|..|+ ++++.. .......|.|.||+++|| +.|+|||+|||+.... .|. .+.+..+..++.+.++++...+
T Consensus 299 G~dp~-~~i~v~-----p~~~~~~GGI~vd~~~~t-~ipgLyAaGd~a~~~~-hg~--~rl~~~sl~~~~v~G~~a~~~~ 368 (472)
T 2e5v_A 299 GHNYK-VKIPIF-----PAAHFVDGGIRVNIRGES-NIVNLYAIGEVSDSGL-HGA--NRLASNSLLEGLVFGINLPRYV 368 (472)
T ss_dssp TCCTT-SCEECE-----EEEEEESCEEECCTTCBC-SSBTEEECGGGEECSS-STT--SCCTTHHHHHHHHHHHHGGGTT
T ss_pred CcCcc-cceEee-----hhhceeCCCeEECCCCcc-ccCCEEecchhccccc-CCC--CCCCcccHHHHHHHHHHHHHHH
Confidence 99998 544321 112334688999999999 8999999999988311 111 2344555555555554444333
No 96
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.46 E-value=3.1e-15 Score=154.37 Aligned_cols=46 Identities=13% Similarity=0.116 Sum_probs=38.2
Q ss_pred eC-CCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHH
Q 009310 398 TD-ETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLW 446 (538)
Q Consensus 398 vd-~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~ 446 (538)
+| ++|+++..|++|++|++..+..+.| .-..++|...|+.|+.++.
T Consensus 353 ~~~~tmes~~~~gly~~GE~ldv~g~~G---Gynlq~a~~sg~~ag~~~~ 399 (401)
T 2gqf_A 353 ISSKTMESNQVSGLYFIGEVLDVTGWLG---GYNFQWAWSSAYACALSIS 399 (401)
T ss_dssp BCTTTCBBSSSTTEEECGGGBSCEECTT---THHHHHHHHHHHHHHHHHH
T ss_pred CChhhccccCCCCEEEEEEeEEeccCCC---CHHHHHHHHHHHHHHHHHh
Confidence 67 7899888999999999999865544 3567889999999999875
No 97
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.46 E-value=3.7e-17 Score=164.30 Aligned_cols=261 Identities=15% Similarity=0.051 Sum_probs=141.4
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCC-CCccccccHHHHhccCCcEEEE
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEV-DAWEIAPRFADLLANTGVQFFK 156 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~-~~~~~~~~~~~~~~~~~v~~~~ 156 (538)
..+||+|||||||||+||++|++. ..|++|+|||+++......... +.. ....+......++++.++++..
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~----r~G~~V~viEk~~~~GG~~~~~----~~~~~~~~l~~~~~~~~~e~Gv~~~~ 135 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKN----RPDLKVCIIESSVAPGGGSWLG----GQLFSAMVMRKPAHLFLQELEIPYED 135 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHH----CTTSCEEEECSSSSCCTTTTCC----STTCCCEEEETTTHHHHHHTTCCCEE
T ss_pred cCCCEEEECCCHHHHHHHHHHHHh----CCCCeEEEEECCCCCCceEEeC----CccCCHHHHHHHHHHHHHHcCCEEEE
Confidence 347999999999999999999752 2689999999988755443321 111 1122223344555556665543
Q ss_pred eeEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCCCCCCccccCcCCCChHHHHHHHHHHHHHHH
Q 009310 157 DRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELER 236 (538)
Q Consensus 157 ~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~ 236 (538)
.. ......+.++++++..+..+.+||...... ....+.. .
T Consensus 136 ~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~----------~ 175 (326)
T 3fpz_A 136 EG----------------------------DYVVVKHAALFISTVLSKVLQLPNVKLFNA--TCVEDLV----------T 175 (326)
T ss_dssp CS----------------------------SEEEESCHHHHHHHHHHHHHTSTTEEEETT--EEEEEEE----------E
T ss_pred CC----------------------------cceecceeEEEEcchhhhccccccceeecc--cccceee----------c
Confidence 21 112223333444554444455555421100 0000000 0
Q ss_pred hccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEEcCceeeEEec
Q 009310 237 RNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGYFVRCIRR 316 (538)
Q Consensus 237 ~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~ 316 (538)
.......+++++|+|+|.++++.|..+...+.+ ++++.+.......... .... ..+.+...
T Consensus 176 ~~~~~~~~~~v~viggg~~av~~a~~~~~~~~~---v~i~~~~~~~~~~~~~----------~~~~------~~~~~~~g 236 (326)
T 3fpz_A 176 RPPTEKGEVTVAGVVTNWTLVTQAHGTQCAMDP---NVIELAGYKNDGTRDL----------SQKH------GVILSTTG 236 (326)
T ss_dssp ESSCSSSSCEEEEEEEEEHHHHTCTTSSSCCCC---EEEEESCBCTTSSBCT----------TSCC------CEEEECCC
T ss_pred cCCcccCCCEEEEEccCceeeehhhhhhhccCc---EEEEeecccccccccc----------eeec------ceEEEEec
Confidence 000011257999999999999998877554444 7777665433211000 0000 01111111
Q ss_pred cccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCCCCCCCccCCCCcCCCCCe
Q 009310 317 VGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHVEPPNNRLHDLPLNARGQA 396 (538)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l~~~~~~~~~~~l~~~G~i 396 (538)
.. ..... ......+++|.++.+.|.+|.. ..+ ..+.+
T Consensus 237 ~~------------------------~~~~~------~~~~~~~~~~~~~~~~g~~~~~------------~~~-~e~~i 273 (326)
T 3fpz_A 237 HD------------------------GPFGA------FCAKRIVDIDQNQKLGGMKGLD------------MNH-AEHDV 273 (326)
T ss_dssp SC------------------------SSSCS------HHHHHHHHHCTTCCCCCCCCBC------------HHH-HHHHH
T ss_pred ce------------------------eeEee------cceeEEEecCceeeecceeccc------------ccc-cCCeE
Confidence 11 00000 0022345667777777766542 111 13557
Q ss_pred eeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHC
Q 009310 397 ETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIN 450 (538)
Q Consensus 397 ~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~ 450 (538)
.+|..+++ +.|+||++||++...+...+ ..++...++..|+.||+.|.+.|.
T Consensus 274 v~~~~~~t-~vpGv~aaGDaa~~v~g~~r-mGp~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 274 VIHSGAYA-GVDNMYFAGMEVAELDGLNR-MGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp HHHCEECT-TSBTEEECTHHHHHHHTCCB-CCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCeEE-CCCCEEEEchHhccccCCCc-CchHHHHHHHHHHHHHHHHHHHhc
Confidence 77888888 99999999999864332100 012445567899999999998774
No 98
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.44 E-value=7.8e-14 Score=132.89 Aligned_cols=163 Identities=15% Similarity=0.070 Sum_probs=105.6
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccC-----------------CC-------CChhhHHHHHHHHHh
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTIC-----------------PT-------GTPGNREAALKVLSA 300 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l-----------------~~-------~~~~~~~~~~~~l~~ 300 (538)
.+|+|||||++|+++|..|++.+.+ |+++++..... .. ....+...+.+.+++
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~---v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~ 80 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVR---VGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEG 80 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCC---EEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCC---EEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHc
Confidence 3799999999999999999987665 99999862110 00 012555677788888
Q ss_pred C-CCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCce-EEeecccccCCcceEEeccEEEEecCCCCCCCCC
Q 009310 301 R-KVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKY-ILELQPAIKGLESQIFEADLVLWTVGSKPLLPHV 378 (538)
Q Consensus 301 ~-gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l 378 (538)
. |++++ +..|+++..++ +.+ .+.+. +++++++|.||+|+|...+....
T Consensus 81 ~~gv~i~-~~~v~~i~~~~-----------------------~~v~~v~~~------~g~~i~a~~VV~A~G~~s~~~~~ 130 (232)
T 2cul_A 81 LRPLHLF-QATATGLLLEG-----------------------NRVVGVRTW------EGPPARGEKVVLAVGSFLGARLF 130 (232)
T ss_dssp CTTEEEE-ECCEEEEEEET-----------------------TEEEEEEET------TSCCEECSEEEECCTTCSSCEEE
T ss_pred CCCcEEE-EeEEEEEEEeC-----------------------CEEEEEEEC------CCCEEECCEEEECCCCChhhcee
Confidence 7 99999 56899987643 232 23322 56689999999999996552211
Q ss_pred CCCC------------------CccCCCCcCCC--------CC-------eeeC------CCcccCCCCCEEEccccccc
Q 009310 379 EPPN------------------NRLHDLPLNAR--------GQ-------AETD------ETLCVKGHPRIFALGDSSAL 419 (538)
Q Consensus 379 ~~~~------------------~~~~~~~l~~~--------G~-------i~vd------~~l~~~~~~~VfaiGD~~~~ 419 (538)
.... +...+++++.. |. ..+. ..+..+++|+||++|||+ .
T Consensus 131 ~G~~~~~~g~~g~~~~~~l~~~l~~~g~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~ 209 (232)
T 2cul_A 131 LGGVVEEAGRLSEASYPDLLEDLSRLGFRFVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-R 209 (232)
T ss_dssp ETTEEESEEETTEECCSHHHHHHHHTTCCEEEEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-S
T ss_pred cCCccCCCCCCcccchhhhCHHHHhCCCeEEccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-c
Confidence 0000 00011111110 00 0000 012212789999999999 5
Q ss_pred cCCCCCCCCccHHHHHHHHHHHHHHHHHHH
Q 009310 420 RDSSGRPLPATAQVAFQQADFAGWNLWAAI 449 (538)
Q Consensus 420 ~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l 449 (538)
..++..|++||+.+|.+|...+
T Consensus 210 --------~g~~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 210 --------EGDYARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp --------CCCHHHHHHHHHHHHHHHHHHC
T ss_pred --------CccHHHHHHHHHHHHHHHHhhc
Confidence 3488889999999999998865
No 99
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.28 E-value=4.3e-11 Score=128.50 Aligned_cols=148 Identities=21% Similarity=0.227 Sum_probs=90.4
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC-CcccC---cc--------h-hh--hhcCCC--------
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE-RFVFK---PM--------L-YE--LLSGEV-------- 134 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~-~~~~~---p~--------~-~~--~~~g~~-------- 134 (538)
..+||||||||+||++||..|++ .|.+|+|||++. .+... |. + .+ .+.+..
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr------~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~g 100 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAAR------MGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAG 100 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHE
T ss_pred CcCCEEEECChHHHHHHHHHHHh------CCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcc
Confidence 45899999999999999999999 678999999974 22111 00 0 00 011100
Q ss_pred ---------------------CCccccccHHHHhcc-CCcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcCCceEEEe
Q 009310 135 ---------------------DAWEIAPRFADLLAN-TGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEY 192 (538)
Q Consensus 135 ---------------------~~~~~~~~~~~~~~~-~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~y 192 (538)
+...+...+.+.++. .+++++.+.|+.+..+... ...|.+.+|..+.+
T Consensus 101 i~f~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~----------V~GV~t~dG~~I~A 170 (651)
T 3ces_A 101 IQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDR----------VVGAVTQMGLKFRA 170 (651)
T ss_dssp EEEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSB----------EEEEEETTSEEEEE
T ss_pred cchhhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCE----------EEEEEECCCCEEEC
Confidence 000112223444555 5899988899988643321 01366677888999
Q ss_pred eEEEEeCCCCCCCCCCCCccccCcCCCChHHHHHHHHHHHHHHHhccCCCCCCeEEEECCChhHHHHHHHHHHHHHhcCc
Q 009310 193 DWLVLSLGAEPKLDVVPGAAEFAFPFSTLEDACRVDRKLSELERRNFGKDSLIRVAVVGCGYSGVELAATVSERLEEKGI 272 (538)
Q Consensus 193 D~lVlAtG~~~~~p~ipG~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~ 272 (538)
|.||+|||+.+..+.++|...+. +.+ +| |.++++++..|.+.+.+
T Consensus 171 d~VVLATGt~s~~~~i~G~~~~~----------------------------~gr---iG-g~~a~eLA~~L~~lG~~--- 215 (651)
T 3ces_A 171 KAVVLTVGTFLDGKIHIGLDNYS----------------------------GGR---AG-DPPSIPLSRRLRELPLR--- 215 (651)
T ss_dssp EEEEECCSTTTCCEEECC---------------------------------------------CCHHHHHHHTTTCC---
T ss_pred CEEEEcCCCCccCccccCcccCC----------------------------CCC---cc-chhhhHHHHHHHhcCCe---
Confidence 99999999998777777753210 113 45 77889999998777654
Q ss_pred EEEE
Q 009310 273 VQAI 276 (538)
Q Consensus 273 Vtlv 276 (538)
|+.+
T Consensus 216 v~~~ 219 (651)
T 3ces_A 216 VGRL 219 (651)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5554
No 100
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.20 E-value=1.8e-10 Score=123.25 Aligned_cols=119 Identities=16% Similarity=0.191 Sum_probs=78.5
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC-CcccC---c--------ch-hh--hhcCC---------
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE-RFVFK---P--------ML-YE--LLSGE--------- 133 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~-~~~~~---p--------~~-~~--~~~g~--------- 133 (538)
..+||||||||+||++||..|++ .|.+|+|||++. .+... | .+ .+ .+++.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr------~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~g 99 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAAR------MGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTG 99 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHH------TTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHE
T ss_pred CcCCEEEECCCHHHHHHHHHHHH------CCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcc
Confidence 35899999999999999999999 678999999974 22111 0 00 00 01110
Q ss_pred C--------------------CCccccccHHHHhcc-CCcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcCCceEEEe
Q 009310 134 V--------------------DAWEIAPRFADLLAN-TGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEY 192 (538)
Q Consensus 134 ~--------------------~~~~~~~~~~~~~~~-~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~y 192 (538)
. +...+...+.+.++. .+++++.+.|+.+..+... + ..|.+.+|..+.+
T Consensus 100 i~f~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~------V----~GV~t~dG~~i~A 169 (637)
T 2zxi_A 100 IQFKMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQ------V----VGVRTNLGVEYKT 169 (637)
T ss_dssp EEEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSB------E----EEEEETTSCEEEC
T ss_pred cceeecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCE------E----EEEEECCCcEEEe
Confidence 0 001112223445555 4899988899988654321 0 1366777889999
Q ss_pred eEEEEeCCCCCCCCCCCCcc
Q 009310 193 DWLVLSLGAEPKLDVVPGAA 212 (538)
Q Consensus 193 D~lVlAtG~~~~~p~ipG~~ 212 (538)
|.||+|||..+..+.++|..
T Consensus 170 daVVLATG~~s~~~~~~G~~ 189 (637)
T 2zxi_A 170 KAVVVTTGTFLNGVIYIGDK 189 (637)
T ss_dssp SEEEECCTTCBTCEEEETTE
T ss_pred CEEEEccCCCccCceeccce
Confidence 99999999988777777754
No 101
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.09 E-value=2.4e-10 Score=103.92 Aligned_cols=108 Identities=24% Similarity=0.233 Sum_probs=75.8
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCc-chhhh--hcCCCCCccccccHHHHhccCCcEEEE
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP-MLYEL--LSGEVDAWEIAPRFADLLANTGVQFFK 156 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p-~~~~~--~~g~~~~~~~~~~~~~~~~~~~v~~~~ 156 (538)
++|+|||||++|+++|..|++ .|.+|+|||+++...... .+..+ ........++...+.+.+++.+++++.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~------~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~ 75 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLAR------AGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRP 75 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHH------TTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHH------CCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEe
Confidence 689999999999999999999 678999999987432110 00000 001112234455566677778999988
Q ss_pred eeEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCC
Q 009310 157 DRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (538)
Q Consensus 157 ~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~ 205 (538)
++|++++.+... ..+.++++ .+.+|.||+|+|..|..
T Consensus 76 ~~v~~i~~~~~~-----------~~v~~~~g-~i~ad~vI~A~G~~~~~ 112 (180)
T 2ywl_A 76 GVVKGVRDMGGV-----------FEVETEEG-VEKAERLLLCTHKDPTL 112 (180)
T ss_dssp CCCCEEEECSSS-----------EEEECSSC-EEEEEEEEECCTTCCHH
T ss_pred CEEEEEEEcCCE-----------EEEEECCC-EEEECEEEECCCCCCCc
Confidence 888888654321 25777777 89999999999998743
No 102
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.05 E-value=6.4e-11 Score=123.19 Aligned_cols=95 Identities=16% Similarity=0.150 Sum_probs=67.3
Q ss_pred hhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEE
Q 009310 288 PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLW 367 (538)
Q Consensus 288 ~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~ 367 (538)
..+...+...+++.| +|+++++|++|+.++ +++++... +|+++.+|.||+
T Consensus 204 ~g~~~l~~~~~~~~g-~i~~~~~V~~i~~~~-----------------------~~v~v~~~------~g~~~~ad~vi~ 253 (431)
T 3k7m_X 204 NGSADLVDAMSQEIP-EIRLQTVVTGIDQSG-----------------------DVVNVTVK------DGHAFQAHSVIV 253 (431)
T ss_dssp TCTHHHHHHHHTTCS-CEESSCCEEEEECSS-----------------------SSEEEEET------TSCCEEEEEEEE
T ss_pred CcHHHHHHHHHhhCC-ceEeCCEEEEEEEcC-----------------------CeEEEEEC------CCCEEEeCEEEE
Confidence 445566666677778 999999999998755 55666543 566799999999
Q ss_pred ecC--------CCCCCCCCCCCCCccCCCCcCCCCCeeeCCCcccCCCCCEEEccccc
Q 009310 368 TVG--------SKPLLPHVEPPNNRLHDLPLNARGQAETDETLCVKGHPRIFALGDSS 417 (538)
Q Consensus 368 a~G--------~~p~~~~l~~~~~~~~~~~l~~~G~i~vd~~l~~~~~~~VfaiGD~~ 417 (538)
|+| +.|+.+...... .+ .+.....++|+..+++ ..+++|+.||+.
T Consensus 254 a~~~~~l~~i~~~p~l~~~~~~~---~~-~~~~~~~~kv~~~~~~-~~~~i~~~~d~~ 306 (431)
T 3k7m_X 254 ATPMNTWRRIVFTPALPERRRSV---IE-EGHGGQGLKILIHVRG-AEAGIECVGDGI 306 (431)
T ss_dssp CSCGGGGGGSEEESCCCHHHHHH---HH-HCCCCCEEEEEEEEES-CCTTEEEEBSSS
T ss_pred ecCcchHhheeeCCCCCHHHHHH---HH-hCCCcceEEEEEEECC-CCcCceEcCCCC
Confidence 999 778765322100 00 1122344889988988 679999999984
No 103
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.01 E-value=3.8e-10 Score=110.68 Aligned_cols=183 Identities=15% Similarity=0.078 Sum_probs=110.0
Q ss_pred CeEEEECCChhHHHHHHHHHHH-HHhcCcEEEEecCCccCCC--------------------------------------
Q 009310 245 IRVAVVGCGYSGVELAATVSER-LEEKGIVQAINVETTICPT-------------------------------------- 285 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~-~~~~~~Vtlv~~~~~~l~~-------------------------------------- 285 (538)
..|+|||+|++|+.+|..|++. +.+ |+++++.+.+...
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~---V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~ 116 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQ---VAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVK 116 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSC---EEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEES
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCe---EEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEec
Confidence 3799999999999999999874 444 9999987654211
Q ss_pred CChhhHHHHHHHHHh-CCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeec----cc-c-cCCcce
Q 009310 286 GTPGNREAALKVLSA-RKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQ----PA-I-KGLESQ 358 (538)
Q Consensus 286 ~~~~~~~~~~~~l~~-~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~----~~-~-~~~~g~ 358 (538)
....+...+.+.+.+ .||++++++.|+++..+++.. .++.+... .. . ..++..
T Consensus 117 ~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v--------------------~gv~~~~~~~~~~~~~g~~g~~~ 176 (284)
T 1rp0_A 117 HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRV--------------------GGVVTNWALVAQNHHTQSCMDPN 176 (284)
T ss_dssp CHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEE--------------------EEEEEEEHHHHTCTTTSSCCCCE
T ss_pred CHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeE--------------------EEEEEeccccccccCccccCceE
Confidence 012233345555655 699999999999997643110 13333210 00 0 001236
Q ss_pred EEeccEEEEecCCCCCCCCCCCCCCccCC--CCcCCCCCeeeCC-------CcccCCCCCEEEccccccccCCCCCCCCc
Q 009310 359 IFEADLVLWTVGSKPLLPHVEPPNNRLHD--LPLNARGQAETDE-------TLCVKGHPRIFALGDSSALRDSSGRPLPA 429 (538)
Q Consensus 359 ~l~~D~vI~a~G~~p~~~~l~~~~~~~~~--~~l~~~G~i~vd~-------~l~~~~~~~VfaiGD~~~~~~~~~~~~~~ 429 (538)
.+++|.||+|+|..++............+ ..+.....+.+|. ..++ ..|++|++||++...+... ...+
T Consensus 177 ~i~ad~VV~AtG~~s~~~~~~~~~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~-~~p~i~a~G~~~~~~~g~~-~~gp 254 (284)
T 1rp0_A 177 VMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTRE-VVPGMIVTGMEVAEIDGAP-RMGP 254 (284)
T ss_dssp EEEEEEEEECCCSSSTTTTHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHHCEE-EETTEEECTHHHHHHHTCE-ECCS
T ss_pred EEECCEEEECCCCchHHHHHHHHHhhhccCCCCcCCcCCchhhhhhHHHhhcccc-ccCCEEEEeeehhhhcCCC-CcCh
Confidence 79999999999987764221100000000 1112222232221 2233 5699999999975322111 1234
Q ss_pred cHHHHHHHHHHHHHHHHHHHCCC
Q 009310 430 TAQVAFQQADFAGWNLWAAINDR 452 (538)
Q Consensus 430 ~~~~A~~qg~~aa~~i~~~l~~~ 452 (538)
+...+..+|+.+|.+|...+...
T Consensus 255 ~~~~~~~sG~~~a~~i~~~l~~~ 277 (284)
T 1rp0_A 255 TFGAMMISGQKAGQLALKALGLP 277 (284)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhHHHHHHHHHHHhhhh
Confidence 56788899999999999988643
No 104
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.93 E-value=1.1e-09 Score=103.87 Aligned_cols=117 Identities=25% Similarity=0.260 Sum_probs=75.3
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchh-----------hhhc--CCCCCccccccHHH
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLY-----------ELLS--GEVDAWEIAPRFAD 145 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~-----------~~~~--g~~~~~~~~~~~~~ 145 (538)
.+||+|||||++|+++|..|++ .|.+|+|||++......+..+ ..+. ...+...+...+.+
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~------~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~ 76 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQ------KGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKY 76 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH------TTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHH------CCCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHH
Confidence 4799999999999999999999 678999999973211110000 0000 00011122334455
Q ss_pred HhccC-CcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCCCCCCc
Q 009310 146 LLANT-GVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVVPGA 211 (538)
Q Consensus 146 ~~~~~-~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p~ipG~ 211 (538)
.+++. +++++..+|+++..+... + ..+.++++..+.+|+||+|+|........+|.
T Consensus 77 ~~~~~~gv~i~~~~v~~i~~~~~~------v----~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~ 133 (232)
T 2cul_A 77 LLEGLRPLHLFQATATGLLLEGNR------V----VGVRTWEGPPARGEKVVLAVGSFLGARLFLGG 133 (232)
T ss_dssp HHHTCTTEEEEECCEEEEEEETTE------E----EEEEETTSCCEECSEEEECCTTCSSCEEEETT
T ss_pred HHHcCCCcEEEEeEEEEEEEeCCE------E----EEEEECCCCEEECCEEEECCCCChhhceecCC
Confidence 56665 899988888888654321 0 13566777789999999999987654444454
No 105
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.75 E-value=2.5e-09 Score=113.41 Aligned_cols=39 Identities=33% Similarity=0.538 Sum_probs=31.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK 123 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~ 123 (538)
+|+|||||||++||+||.+|++ .|++|+|+|+++..+..
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~------~G~~V~VlEa~~~~GG~ 39 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQA------AGIPVLLLEQRDKPGGR 39 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHH------TTCCEEEECCC------
T ss_pred CCCEEEECCcHHHHHHHHHHHH------CCCcEEEEccCCCCCCc
Confidence 4899999999999999999999 78899999999986554
No 106
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.73 E-value=1e-07 Score=98.56 Aligned_cols=56 Identities=13% Similarity=0.121 Sum_probs=45.7
Q ss_pred ChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEE
Q 009310 287 TPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVL 366 (538)
Q Consensus 287 ~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI 366 (538)
...+.+.+.+.+++.|++|+++++|++|..++ +++ +. .+++++.+|.||
T Consensus 188 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~-----------------------~~v-V~-------~~g~~~~ad~Vv 236 (421)
T 3nrn_A 188 CKAVIDELERIIMENKGKILTRKEVVEINIEE-----------------------KKV-YT-------RDNEEYSFDVAI 236 (421)
T ss_dssp HHHHHHHHHHHHHTTTCEEESSCCEEEEETTT-----------------------TEE-EE-------TTCCEEECSEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEEC-----------------------CEE-EE-------eCCcEEEeCEEE
Confidence 35677888899999999999999999998754 455 43 156789999999
Q ss_pred EecCCCC
Q 009310 367 WTVGSKP 373 (538)
Q Consensus 367 ~a~G~~p 373 (538)
+|+|...
T Consensus 237 ~a~~~~~ 243 (421)
T 3nrn_A 237 SNVGVRE 243 (421)
T ss_dssp ECSCHHH
T ss_pred ECCCHHH
Confidence 9998754
No 107
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.72 E-value=1.7e-08 Score=104.33 Aligned_cols=108 Identities=23% Similarity=0.307 Sum_probs=69.7
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcc---------------hhhhhcCC---------
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPM---------------LYELLSGE--------- 133 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~---------------~~~~~~g~--------- 133 (538)
..+||+|||||+||++||..|++ .|++|+|||+++....... ...+....
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~------~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~ 99 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGK------RGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALA 99 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHH------CCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHH
Confidence 45799999999999999999999 6889999999875321100 00000000
Q ss_pred -----------------------------CCCccccccHHHHhccCCcEEEEe-eEEEEcCCCCcCcCCCceeecccEEE
Q 009310 134 -----------------------------VDAWEIAPRFADLLANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVL 183 (538)
Q Consensus 134 -----------------------------~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i~~~~~~~~~~~~~~~~~~~v~ 183 (538)
.....+...+.+.+++.+++++.+ +|+++..+.. ...|.
T Consensus 100 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~-----------~~~V~ 168 (417)
T 3v76_A 100 RYRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTAS-----------GFRVT 168 (417)
T ss_dssp HSCHHHHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETT-----------EEEEE
T ss_pred hcCHHHHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCC-----------EEEEE
Confidence 000122223344445568888874 7888864332 12577
Q ss_pred cCCceEEEeeEEEEeCCCCC
Q 009310 184 LESGLIVEYDWLVLSLGAEP 203 (538)
Q Consensus 184 ~~~g~~~~yD~lVlAtG~~~ 203 (538)
++++ .+.+|+||+|||..+
T Consensus 169 ~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 169 TSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp ETTE-EEEESEEEECCCCSS
T ss_pred ECCc-EEEeeEEEECCCCcc
Confidence 7777 899999999999875
No 108
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.67 E-value=2.7e-08 Score=105.36 Aligned_cols=120 Identities=20% Similarity=0.253 Sum_probs=76.0
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC------cchhhhhc--------CCC--------
Q 009310 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK------PMLYELLS--------GEV-------- 134 (538)
Q Consensus 77 ~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~------p~~~~~~~--------g~~-------- 134 (538)
...++|+|||||++|+++|..|++ .|++|+|||+++..... +.....+. +..
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~------~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 163 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELAL------LGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHI 163 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEE
T ss_pred cCCCCEEEECccHHHHHHHHHHHH------CCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccC
Confidence 456899999999999999999999 68899999998764321 11000000 000
Q ss_pred CCccccccHHHHhccCCcEEEEe-eEEEEcCCCCcCcCCCceeecccEEEc--C-Cc--eEEEeeEEEEeCCCCCCCCCC
Q 009310 135 DAWEIAPRFADLLANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLL--E-SG--LIVEYDWLVLSLGAEPKLDVV 208 (538)
Q Consensus 135 ~~~~~~~~~~~~~~~~~v~~~~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~--~-~g--~~~~yD~lVlAtG~~~~~p~i 208 (538)
....+...+.+.+...+++++.+ +|+++..+... .. ...+.+ . +| ..+.+|+||+|+|..+.....
T Consensus 164 ~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~---~~-----~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r~~ 235 (497)
T 2bry_A 164 SIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRK---GS-----GWRAQLQPNPPAQLASYEFDVLISAAGGKFVPEGF 235 (497)
T ss_dssp EHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCST---TC-----CBEEEEESCCCHHHHTCCBSEEEECCCTTCCCTTC
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCC---CC-----EEEEEEEECCCCCEEEEEcCEEEECCCCCcccccc
Confidence 00222233445555678998875 88888653110 00 113444 3 55 478999999999998766554
Q ss_pred CC
Q 009310 209 PG 210 (538)
Q Consensus 209 pG 210 (538)
.+
T Consensus 236 ~~ 237 (497)
T 2bry_A 236 TI 237 (497)
T ss_dssp EE
T ss_pred cc
Confidence 44
No 109
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.65 E-value=3.9e-08 Score=100.33 Aligned_cols=105 Identities=23% Similarity=0.298 Sum_probs=68.7
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCc-------c----h------hhhhc----------
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP-------M----L------YELLS---------- 131 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p-------~----~------~~~~~---------- 131 (538)
.++|+|||||++|+++|..|++ .|++|+|||+.+...... . + ..+..
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~------~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 84 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQ------NGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYET 84 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHH------CCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEE
Confidence 4799999999999999999999 688999999987542210 0 0 00000
Q ss_pred ---CC----C----------CCccccccHHHHhccCCcEEEEe-eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEee
Q 009310 132 ---GE----V----------DAWEIAPRFADLLANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYD 193 (538)
Q Consensus 132 ---g~----~----------~~~~~~~~~~~~~~~~~v~~~~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD 193 (538)
|. . ....+...+.+.+.+.+++++.+ +|++++.+ + .+++.+|.++.+|
T Consensus 85 ~~~g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-------------~-~v~~~~g~~~~ad 150 (379)
T 3alj_A 85 WMHNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPV-------------G-RLTLQTGEVLEAD 150 (379)
T ss_dssp EETTEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETT-------------T-EEEETTSCEEECS
T ss_pred EeCCceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeC-------------C-EEEECCCCEEEcC
Confidence 00 0 00011112334444567888765 78888541 1 3666778889999
Q ss_pred EEEEeCCCCC
Q 009310 194 WLVLSLGAEP 203 (538)
Q Consensus 194 ~lVlAtG~~~ 203 (538)
.||.|+|..+
T Consensus 151 ~vV~AdG~~s 160 (379)
T 3alj_A 151 LIVGADGVGS 160 (379)
T ss_dssp EEEECCCTTC
T ss_pred EEEECCCccH
Confidence 9999999865
No 110
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.63 E-value=5.6e-07 Score=90.79 Aligned_cols=60 Identities=17% Similarity=0.094 Sum_probs=45.0
Q ss_pred hhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEE
Q 009310 288 PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLW 367 (538)
Q Consensus 288 ~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~ 367 (538)
..+...+.+.+++.|++++++++|+++..+++ +.+.+... +++..++.+|.||+
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~----------------------~~~~v~~~----~g~~~~~~a~~VV~ 203 (369)
T 3dme_A 150 HALMLAYQGDAESDGAQLVFHTPLIAGRVRPE----------------------GGFELDFG----GAEPMTLSCRVLIN 203 (369)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTT----------------------SSEEEEEC----TTSCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCC----------------------ceEEEEEC----CCceeEEEeCEEEE
Confidence 46777888889999999999999999987542 22455432 11235899999999
Q ss_pred ecCCCC
Q 009310 368 TVGSKP 373 (538)
Q Consensus 368 a~G~~p 373 (538)
|+|...
T Consensus 204 A~G~~s 209 (369)
T 3dme_A 204 AAGLHA 209 (369)
T ss_dssp CCGGGH
T ss_pred CCCcch
Confidence 999864
No 111
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.62 E-value=6.8e-08 Score=102.75 Aligned_cols=47 Identities=6% Similarity=-0.048 Sum_probs=41.0
Q ss_pred eeeCCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHC
Q 009310 396 AETDETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIN 450 (538)
Q Consensus 396 i~vd~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~ 450 (538)
|..|+++++.+.+++|++||++.+ ...+..|..+|-.+|+.|...+.
T Consensus 497 i~~~~~~~~~~~~gly~~GegaG~--------a~gi~~Aa~~G~~~a~~i~~~~~ 543 (549)
T 3nlc_A 497 IKRGKDFQSVNLKGFYPAGEGAGY--------AGGILSAGIDGIKVAEAVARDIV 543 (549)
T ss_dssp CCCTTTTSCTTCBTEEECHHHHTS--------CCSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCceECCcCCEEEccccCCh--------hhHHHHHHHHHHHHHHHHHHHhh
Confidence 677888998789999999999997 56788888999999999988765
No 112
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.60 E-value=1.1e-07 Score=93.10 Aligned_cols=37 Identities=24% Similarity=0.393 Sum_probs=32.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCc
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~ 120 (538)
.+||+|||||++|+++|..|++. +|.+|+|||+++..
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~-----~G~~V~viEk~~~~ 75 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKN-----PNVQVAIIEQSVSP 75 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTS-----TTSCEEEEESSSSC
T ss_pred ccCEEEECccHHHHHHHHHHHHc-----CCCeEEEEECCCCC
Confidence 37999999999999999999982 27899999998754
No 113
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.59 E-value=5.4e-08 Score=104.48 Aligned_cols=119 Identities=18% Similarity=0.221 Sum_probs=74.9
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC-CcccC---cc---------hhh--hhcCC--------
Q 009310 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE-RFVFK---PM---------LYE--LLSGE-------- 133 (538)
Q Consensus 77 ~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~-~~~~~---p~---------~~~--~~~g~-------- 133 (538)
...+||+|||||+||++||..|++ .|.+|+|||++. .+... |. +.+ .+.+.
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr------~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~ 92 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVAR------GGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDAT 92 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHH
T ss_pred cCcCCEEEECccHHHHHHHHHHHH------CCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhc
Confidence 445899999999999999999999 678999999974 12111 10 000 01110
Q ss_pred ---------------------CCCccccccHHHHhcc-CCcEEEEeeEEEEcCCCCcCcCCCceeecccEEEcCCceEEE
Q 009310 134 ---------------------VDAWEIAPRFADLLAN-TGVQFFKDRVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVE 191 (538)
Q Consensus 134 ---------------------~~~~~~~~~~~~~~~~-~~v~~~~~~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~ 191 (538)
.+...+...+.+.++. .+++++.+.|+.+..+... + ..|.+.+|..+.
T Consensus 93 gi~f~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~------V----~GV~t~~G~~i~ 162 (641)
T 3cp8_A 93 GIQFRMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSANSGK------F----SSVTVRSGRAIQ 162 (641)
T ss_dssp EEEEEEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTE------E----EEEEETTSCEEE
T ss_pred CCchhhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEeeEEEEEEecCCE------E----EEEEECCCcEEE
Confidence 0000112223444555 3899988888887643321 0 125667788999
Q ss_pred eeEEEEeCCCCCCCCCCCCc
Q 009310 192 YDWLVLSLGAEPKLDVVPGA 211 (538)
Q Consensus 192 yD~lVlAtG~~~~~p~ipG~ 211 (538)
+|.||+|||+.+..+.++|.
T Consensus 163 Ad~VVLATG~~s~~~i~~G~ 182 (641)
T 3cp8_A 163 AKAAILACGTFLNGLIHIGM 182 (641)
T ss_dssp EEEEEECCTTCBTCEEEETT
T ss_pred eCEEEECcCCCCCccceeee
Confidence 99999999998765444443
No 114
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.58 E-value=5.3e-08 Score=99.18 Aligned_cols=39 Identities=21% Similarity=0.305 Sum_probs=33.2
Q ss_pred CCCCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 74 WPDKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 74 ~~~~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
++....+||+|||||++|+++|+.|++ +|++|+|||++.
T Consensus 12 ~~~~~~~dvvIIGgG~~Gl~~A~~La~------~G~~V~llE~~~ 50 (382)
T 1ryi_A 12 RAMKRHYEAVVIGGGIIGSAIAYYLAK------ENKNTALFESGT 50 (382)
T ss_dssp --CCSEEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSS
T ss_pred hccCCCCCEEEECcCHHHHHHHHHHHh------CCCcEEEEeCCC
Confidence 334456899999999999999999999 688999999975
No 115
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.58 E-value=3.5e-08 Score=104.45 Aligned_cols=158 Identities=15% Similarity=0.079 Sum_probs=101.5
Q ss_pred EeeEEEEeCCCCCCCCCCCCcc-ccCcCCCChHHHHHHH-HHHHHHHHh-ccCCCCCCeEEEECCChhHHHHHHHHHHHH
Q 009310 191 EYDWLVLSLGAEPKLDVVPGAA-EFAFPFSTLEDACRVD-RKLSELERR-NFGKDSLIRVAVVGCGYSGVELAATVSERL 267 (538)
Q Consensus 191 ~yD~lVlAtG~~~~~p~ipG~~-~~~~~~~~~~d~~~~~-~~l~~~~~~-~~~~~~~~~VvVVGgG~~g~E~A~~l~~~~ 267 (538)
.||.+++++|++|..+++++.. +..+......+..++. .++.. +.. ........+|+|||||++|+.+|..|++.+
T Consensus 37 ~~~~l~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dVvIVGgG~aGl~aA~~La~~G 115 (497)
T 2bry_A 37 SFQGLCRALGVESGGGLSQYHKIKAQLNYWSAKSLWAKLDKRASQ-PVYQQGQACTNTKCLVVGAGPCGLRAAVELALLG 115 (497)
T ss_dssp HHHHHHHHHTCCTTCHHHHHHHHHHTCCSTTTHHHHHHHHHHHTS-GGGGGGTTTTTCEEEEECCSHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCCCCCcEeehhhHHHHHHHHHHHhhhhhhhhhcc-ccccCccccCCCCEEEECccHHHHHHHHHHHHCC
Confidence 5788999999998776666542 2333444555544431 11111 000 011123579999999999999999999876
Q ss_pred HhcCcEEEEecCCccCCC----CC-----------------------------hhhHHHHHHHHHhCCCEEEcCceeeEE
Q 009310 268 EEKGIVQAINVETTICPT----GT-----------------------------PGNREAALKVLSARKVQLVLGYFVRCI 314 (538)
Q Consensus 268 ~~~~~Vtlv~~~~~~l~~----~~-----------------------------~~~~~~~~~~l~~~gV~v~~~~~V~~i 314 (538)
.+ |+++++.+.+... .. ..+.+.+.+.+++.||++++++.|+++
T Consensus 116 ~~---V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i 192 (497)
T 2bry_A 116 AR---VVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGL 192 (497)
T ss_dssp CE---EEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEE
T ss_pred Ce---EEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEE
Confidence 55 9999987654211 00 334456667778899999999999999
Q ss_pred eccccccccccCCCCCcccccccccCCCceEEeecccccCCcc--eEEeccEEEEecCCCCCC
Q 009310 315 RRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLES--QIFEADLVLWTVGSKPLL 375 (538)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g--~~l~~D~vI~a~G~~p~~ 375 (538)
..++... +.+.+.+. ...+| .++.+|.||.|+|..+..
T Consensus 193 ~~~~~~~--------------------~~~~v~~~---~~~~g~~~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 193 QPPPRKG--------------------SGWRAQLQ---PNPPAQLASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp ECCCSTT--------------------CCBEEEEE---SCCCHHHHTCCBSEEEECCCTTCCC
T ss_pred EEecCCC--------------------CEEEEEEE---ECCCCCEEEEEcCEEEECCCCCccc
Confidence 8632100 23444432 11033 568999999999998764
No 116
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.57 E-value=3e-07 Score=95.04 Aligned_cols=57 Identities=26% Similarity=0.240 Sum_probs=45.0
Q ss_pred hhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceE-EeecccccCCcceEEeccEEE
Q 009310 288 PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYI-LELQPAIKGLESQIFEADLVL 366 (538)
Q Consensus 288 ~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~g~~l~~D~vI 366 (538)
..+.+.+.+.++++|++|++++.|++|..++ ++++ +.. +++++.+|.||
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~-----------------------~~~~gv~~-------~g~~~~ad~VV 245 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIEN-----------------------GKAAGIIA-------DDRIHDADLVI 245 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEET-----------------------TEEEEEEE-------TTEEEECSEEE
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEEC-----------------------CEEEEEEE-------CCEEEECCEEE
Confidence 5677888889999999999999999998754 3343 332 46789999999
Q ss_pred EecCCCCC
Q 009310 367 WTVGSKPL 374 (538)
Q Consensus 367 ~a~G~~p~ 374 (538)
+|+|....
T Consensus 246 ~a~~~~~~ 253 (425)
T 3ka7_A 246 SNLGHAAT 253 (425)
T ss_dssp ECSCHHHH
T ss_pred ECCCHHHH
Confidence 99987543
No 117
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.56 E-value=2.1e-07 Score=100.68 Aligned_cols=57 Identities=19% Similarity=0.164 Sum_probs=41.3
Q ss_pred CCCeeeCCCcccCCCCCEEEccccccc-cCCCCCCCCccHHHHHHHHHHHHHHHHHHHC
Q 009310 393 RGQAETDETLCVKGHPRIFALGDSSAL-RDSSGRPLPATAQVAFQQADFAGWNLWAAIN 450 (538)
Q Consensus 393 ~G~i~vd~~l~~~~~~~VfaiGD~~~~-~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~ 450 (538)
.|.|.||...|+ ..|++||+|+|+.. .....+.-......++-.|+.++.+++..+.
T Consensus 359 ~GGi~vd~~~~~-~IpGLyAaGe~a~~g~hGanrl~gnsl~~~~vfGr~Ag~~aa~~~~ 416 (602)
T 1kf6_A 359 MGGIETDQNCET-RIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATERAA 416 (602)
T ss_dssp CCEEECCTTSBC-SSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEECCCCcc-ccCCEEEccccccccccCCCCCccHHHHHHHHHHHHHHHHHHHhhh
Confidence 588999999999 89999999999842 1111111123345677889999999987763
No 118
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.55 E-value=1.3e-07 Score=97.15 Aligned_cols=108 Identities=22% Similarity=0.294 Sum_probs=68.8
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCccc-------Ccc----------hhhhh-----------
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF-------KPM----------LYELL----------- 130 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~-------~p~----------~~~~~----------- 130 (538)
.+||+|||||++|+++|..|++ .|++|+|||+.+.... .+. ...+.
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~------~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 79 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGR------QGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELE 79 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEE
T ss_pred cCCEEEECcCHHHHHHHHHHHh------CCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEE
Confidence 4799999999999999999999 6889999999764311 000 00000
Q ss_pred ---cCC----C--------------CCccccccHHHHhccC-CcEEEEe-eEEEEcCCCCcCcCCCceeeccc--EEEcC
Q 009310 131 ---SGE----V--------------DAWEIAPRFADLLANT-GVQFFKD-RVKLLCPSDHLGVNGPMACTHGG--TVLLE 185 (538)
Q Consensus 131 ---~g~----~--------------~~~~~~~~~~~~~~~~-~v~~~~~-~v~~i~~~~~~~~~~~~~~~~~~--~v~~~ 185 (538)
.|. . ....+...+.+.+.+. +++++.+ +|++++.+... . .+.++
T Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~-----------v~g~v~~~ 148 (399)
T 2x3n_A 80 VYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERH-----------AIDQVRLN 148 (399)
T ss_dssp EEETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTS-----------CEEEEEET
T ss_pred EeCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCc-----------eEEEEEEC
Confidence 010 0 0001111233344455 7888764 88888654321 1 36667
Q ss_pred CceEEEeeEEEEeCCCCC
Q 009310 186 SGLIVEYDWLVLSLGAEP 203 (538)
Q Consensus 186 ~g~~~~yD~lVlAtG~~~ 203 (538)
+|..+.+|.||.|+|...
T Consensus 149 ~g~~~~ad~vV~AdG~~s 166 (399)
T 2x3n_A 149 DGRVLRPRVVVGADGIAS 166 (399)
T ss_dssp TSCEEEEEEEEECCCTTC
T ss_pred CCCEEECCEEEECCCCCh
Confidence 787899999999999864
No 119
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.55 E-value=9.8e-08 Score=99.66 Aligned_cols=37 Identities=27% Similarity=0.527 Sum_probs=32.7
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 77 ~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
.+.+||+|||||+||+++|..|++ .|++|+|||+.+.
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~------~G~~V~llEk~~~ 60 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAE------EGANVLLLDKGNK 60 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSS
T ss_pred cCCCCEEEECCcHHHHHHHHHHHH------CCCCEEEEECCCC
Confidence 455899999999999999999998 6789999999764
No 120
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.50 E-value=3.2e-07 Score=97.70 Aligned_cols=40 Identities=23% Similarity=0.419 Sum_probs=35.6
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCc
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP 124 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p 124 (538)
.+||||||||+|||+||..|++ .|++|+|+|++++.+...
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~------~G~~V~vlE~~~~~GGr~ 43 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHD------SGLNVVVLEARDRVGGRT 43 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHH------TTCCEEEECSSSSSBTTC
T ss_pred CceEEEECCCHHHHHHHHHHHH------CCCCEEEEeCCCCCCCce
Confidence 4799999999999999999999 688999999998876553
No 121
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.49 E-value=1.2e-06 Score=89.59 Aligned_cols=35 Identities=20% Similarity=0.345 Sum_probs=32.3
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
.+||+|||||+||+++|..|++ .|++|+|||+++.
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~------~G~~V~l~E~~~~ 38 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAK------YGLKTLMIEKRPE 38 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH------CCCCEEEEeCCCC
Confidence 3799999999999999999999 6889999999875
No 122
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.47 E-value=1.6e-08 Score=109.69 Aligned_cols=38 Identities=26% Similarity=0.153 Sum_probs=33.6
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcc
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFV 121 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~ 121 (538)
..+||||||||+||+++|..|++ .|++|+|||+.+...
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~------~G~~V~liE~~~~~g 82 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVG------AGYKVAMFDIGEIDS 82 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSCCCS
T ss_pred ccCCEEEECCcHHHHHHHHHHHh------CCCcEEEEeccCCCC
Confidence 45799999999999999999999 788999999987644
No 123
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.47 E-value=1.4e-07 Score=97.10 Aligned_cols=40 Identities=18% Similarity=0.282 Sum_probs=32.6
Q ss_pred CCCCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 74 WPDKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 74 ~~~~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
+...++++|+|||||++|+++|+.|++ .|++|+|||+.+.
T Consensus 18 ~~~~~~~dV~IVGaG~aGl~~A~~La~------~G~~V~v~E~~~~ 57 (407)
T 3rp8_A 18 LYFQGHMKAIVIGAGIGGLSAAVALKQ------SGIDCDVYEAVKE 57 (407)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSSC
T ss_pred ccCCCCCEEEEECCCHHHHHHHHHHHh------CCCCEEEEeCCCC
Confidence 334456899999999999999999999 6889999999764
No 124
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.46 E-value=3.8e-07 Score=93.61 Aligned_cols=40 Identities=23% Similarity=0.275 Sum_probs=33.6
Q ss_pred CCCCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 74 WPDKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 74 ~~~~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
|...+.++|+|||||++|+++|..|++ .|++|+|||+.+.
T Consensus 21 M~~~~~~dV~IVGaG~aGl~~A~~L~~------~G~~v~v~E~~~~ 60 (398)
T 2xdo_A 21 MNLLSDKNVAIIGGGPVGLTMAKLLQQ------NGIDVSVYERDND 60 (398)
T ss_dssp --CCTTCEEEEECCSHHHHHHHHHHHT------TTCEEEEEECSSS
T ss_pred ccccCCCCEEEECCCHHHHHHHHHHHH------CCCCEEEEeCCCC
Confidence 333456899999999999999999998 6889999999764
No 125
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.46 E-value=4.7e-07 Score=92.46 Aligned_cols=100 Identities=24% Similarity=0.239 Sum_probs=75.9
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe-
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (538)
.++|+|||||+.|+++|..|++ .|.+|+++|+.+.+. ......++...+.+.+++.+++++.+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~------~g~~Vtlv~~~~~~~----------~~~~~~~~~~~l~~~l~~~gv~i~~~~ 208 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSS------GGYQLDVVAPCEQVM----------PGLLHPAAAKAVQAGLEGLGVRFHLGP 208 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSSSSS----------TTTSCHHHHHHHHHHHHTTTCEEEESC
T ss_pred CCeEEEECCCHHHHHHHHHHHh------CCCeEEEEecCcchh----------hcccCHHHHHHHHHHHHHcCCEEEeCC
Confidence 5899999999999999999998 678999999987621 11112334455667777889999986
Q ss_pred eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCC
Q 009310 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (538)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~ 205 (538)
+|++++.+... ..+.+++|+.+.+|.||+|+|..|+.
T Consensus 209 ~v~~i~~~~~~-----------~~v~~~~g~~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 209 VLASLKKAGEG-----------LEAHLSDGEVIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp CEEEEEEETTE-----------EEEEETTSCEEEESEEEECSCEEECC
T ss_pred EEEEEEecCCE-----------EEEEECCCCEEECCEEEECcCCCcCH
Confidence 78888643221 14667788899999999999988754
No 126
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.45 E-value=1.7e-06 Score=95.30 Aligned_cols=58 Identities=12% Similarity=0.150 Sum_probs=45.4
Q ss_pred hhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcce-EEeccEEE
Q 009310 288 PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQ-IFEADLVL 366 (538)
Q Consensus 288 ~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~-~l~~D~vI 366 (538)
..+...+.+.+++.|+++++++.|+++..++ +++.+... +|. .+.+|.||
T Consensus 412 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~-----------------------~~v~V~t~------~G~~~i~Ad~VV 462 (689)
T 3pvc_A 412 SDLTHALMMLAQQNGMTCHYQHELQRLKRID-----------------------SQWQLTFG------QSQAAKHHATVI 462 (689)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECS-----------------------SSEEEEEC-------CCCCEEESEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeEeEEEEeC-----------------------CeEEEEeC------CCcEEEECCEEE
Confidence 5667778888889999999999999998755 45555532 455 79999999
Q ss_pred EecCCCCC
Q 009310 367 WTVGSKPL 374 (538)
Q Consensus 367 ~a~G~~p~ 374 (538)
+|+|....
T Consensus 463 lAtG~~s~ 470 (689)
T 3pvc_A 463 LATGHRLP 470 (689)
T ss_dssp ECCGGGTT
T ss_pred ECCCcchh
Confidence 99998643
No 127
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.44 E-value=2.9e-07 Score=99.23 Aligned_cols=36 Identities=25% Similarity=0.473 Sum_probs=32.6
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 77 ~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
++.+||||||||+||+++|..|++ .|++|+|||+.+
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar------~G~~V~LiEr~~ 56 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHK------LGHDVTIYERSA 56 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHc------CCCCEEEEcCCC
Confidence 345899999999999999999999 688999999985
No 128
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.43 E-value=2.6e-07 Score=98.13 Aligned_cols=34 Identities=26% Similarity=0.421 Sum_probs=31.7
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
.+||+|||||+||+++|..|++ .|++|+|||+.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~------~G~~V~liE~~~ 40 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAM------RGHRVLLLEREA 40 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT------TTCCEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHh------CCCCEEEEccCC
Confidence 4799999999999999999998 688999999986
No 129
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.43 E-value=5.3e-07 Score=94.10 Aligned_cols=103 Identities=14% Similarity=0.206 Sum_probs=75.5
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (538)
..++|+|||||++|+.+|..|++ .|.+|+++|+.+.+... ....++...+.+.+++.+++++.+
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~------~g~~Vtlv~~~~~~l~~----------~~~~~~~~~l~~~l~~~gv~i~~~ 211 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAK------AGKKVTVIDILDRPLGV----------YLDKEFTDVLTEEMEANNITIATG 211 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSSSTTTT----------TCCHHHHHHHHHHHHTTTEEEEES
T ss_pred CCCeEEEECCCHHHHHHHHHHHH------CCCeEEEEecCcccccc----------cCCHHHHHHHHHHHHhCCCEEEcC
Confidence 45899999999999999999998 67799999998753110 111334445667777889999985
Q ss_pred -eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCCCC
Q 009310 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVV 208 (538)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p~i 208 (538)
.|++++.+.+. ..+.+ ++..+.+|.||+|+|..|+.+.+
T Consensus 212 ~~v~~i~~~~~v-----------~~v~~-~~~~i~~d~vi~a~G~~p~~~~~ 251 (447)
T 1nhp_A 212 ETVERYEGDGRV-----------QKVVT-DKNAYDADLVVVAVGVRPNTAWL 251 (447)
T ss_dssp CCEEEEECSSBC-----------CEEEE-SSCEEECSEEEECSCEEESCGGG
T ss_pred CEEEEEEccCcE-----------EEEEE-CCCEEECCEEEECcCCCCChHHH
Confidence 78888754321 12444 34589999999999998875433
No 130
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.43 E-value=1.7e-07 Score=96.75 Aligned_cols=34 Identities=21% Similarity=0.340 Sum_probs=31.5
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
.+||+|||||++|+++|..|++ .|++|+|||+++
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~------~G~~V~v~E~~~ 38 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNK------SGFKVKIVEKQK 38 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT------TTCCEEEECSSC
T ss_pred cCcEEEECCCHHHHHHHHHHHh------CCCCEEEEeCCC
Confidence 3799999999999999999998 688999999986
No 131
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.40 E-value=2.5e-07 Score=94.76 Aligned_cols=35 Identities=20% Similarity=0.386 Sum_probs=31.7
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
++||+|||||++|+++|..|++ .|++|+|||+.+.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~------~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHK------AGIDNVILERQTP 36 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHH------HTCCEEEECSSCH
T ss_pred CccEEEECCCHHHHHHHHHHHH------CCCCEEEEeCCCC
Confidence 4799999999999999999999 6789999999763
No 132
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.40 E-value=7.3e-07 Score=91.44 Aligned_cols=36 Identities=31% Similarity=0.488 Sum_probs=32.7
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
.+++|+|||||++|+++|..|++ .|++|+|||+.+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~------~G~~v~v~E~~~~ 39 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRD------AGVDVDVYERSPQ 39 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHh------CCCCEEEEecCCC
Confidence 34799999999999999999999 6889999999765
No 133
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.40 E-value=4.5e-07 Score=94.81 Aligned_cols=102 Identities=22% Similarity=0.388 Sum_probs=75.2
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (538)
..++|+|||||++|+.+|..|++ .|.+|+|+|+.+.+. | . ...++...+.+.+++.+++++.+
T Consensus 166 ~~~~vvIiGgG~~g~e~A~~l~~------~g~~V~lv~~~~~~l--~-------~--~~~~~~~~l~~~l~~~Gv~i~~~ 228 (455)
T 2yqu_A 166 VPKRLIVVGGGVIGLELGVVWHR------LGAEVIVLEYMDRIL--P-------T--MDLEVSRAAERVFKKQGLTIRTG 228 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSC--T-------T--SCHHHHHHHHHHHHHHTCEEECS
T ss_pred CCCeEEEECCCHHHHHHHHHHHH------cCCEEEEEecCCccc--c-------c--cCHHHHHHHHHHHHHCCCEEEEC
Confidence 34799999999999999999998 577999999987631 1 0 11233344556666778999985
Q ss_pred -eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCCC
Q 009310 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDV 207 (538)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p~ 207 (538)
+|++++.+... ..+.++++..+.+|.||+|+|..|+.+.
T Consensus 229 ~~V~~i~~~~~~-----------v~v~~~~g~~i~~D~vv~A~G~~p~~~~ 268 (455)
T 2yqu_A 229 VRVTAVVPEAKG-----------ARVELEGGEVLEADRVLVAVGRRPYTEG 268 (455)
T ss_dssp CCEEEEEEETTE-----------EEEEETTSCEEEESEEEECSCEEECCTT
T ss_pred CEEEEEEEeCCE-----------EEEEECCCeEEEcCEEEECcCCCcCCCC
Confidence 88888654321 1355567778999999999999887654
No 134
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.39 E-value=4e-07 Score=97.82 Aligned_cols=37 Identities=22% Similarity=0.311 Sum_probs=30.8
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 77 ~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
.+.+||+|||||++|+++|..|++ .|++|+|||+.+.
T Consensus 47 ~~~~DVvIVGaG~aGL~~A~~La~------~G~~V~VlEr~~~ 83 (570)
T 3fmw_A 47 ALTTDVVVVGGGPVGLMLAGELRA------GGVGALVLEKLVE 83 (570)
T ss_dssp ----CEEEECCSHHHHHHHHHHHH------TTCCEEEEBSCSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHH------CCCCEEEEcCCCC
Confidence 345899999999999999999999 6889999999763
No 135
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.39 E-value=3.9e-07 Score=90.91 Aligned_cols=35 Identities=37% Similarity=0.480 Sum_probs=32.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
++||+|||||++|+++|..|++ .|++|+|||+++.
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~------~G~~V~vlE~~~~ 36 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTA------AGHQVHLFDKSRG 36 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSS
T ss_pred CceEEEECCcHHHHHHHHHHHH------CCCcEEEEECCCC
Confidence 4799999999999999999999 6889999999864
No 136
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.38 E-value=8.7e-07 Score=91.29 Aligned_cols=96 Identities=26% Similarity=0.333 Sum_probs=74.1
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe-
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (538)
.++|+|||||+.|+.+|..|++ .|.+|+++++.+.+. ......++...+.+.+++.+++++.+
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~~l----------~~~~~~~~~~~l~~~l~~~GV~i~~~~ 208 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATART------AGVHVSLVETQPRLM----------SRAAPATLADFVARYHAAQGVDLRFER 208 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSSSSS----------TTTSCHHHHHHHHHHHHHTTCEEEESC
T ss_pred CCeEEEECCCHHHHHHHHHHHh------CCCEEEEEEeCCccc----------ccccCHHHHHHHHHHHHHcCcEEEeCC
Confidence 5899999999999999999998 677999999987631 11111233345566777889999986
Q ss_pred eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCC
Q 009310 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (538)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~ 205 (538)
.+++++ +. .+.+++|..+.+|.||+|+|..|+.
T Consensus 209 ~v~~i~-~~--------------~v~~~~g~~i~~D~vi~a~G~~p~~ 241 (408)
T 2gqw_A 209 SVTGSV-DG--------------VVLLDDGTRIAADMVVVGIGVLAND 241 (408)
T ss_dssp CEEEEE-TT--------------EEEETTSCEEECSEEEECSCEEECC
T ss_pred EEEEEE-CC--------------EEEECCCCEEEcCEEEECcCCCccH
Confidence 888886 22 3666788899999999999988753
No 137
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.36 E-value=7e-07 Score=98.18 Aligned_cols=36 Identities=31% Similarity=0.363 Sum_probs=32.3
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 77 ~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
...+||||||||++|+++|+.|++ +|++|+|||+++
T Consensus 270 ~~~~DVvIIGgGiaGlsaA~~La~------~G~~V~vlEk~~ 305 (676)
T 3ps9_A 270 SSKREAAIIGGGIASALLSLALLR------RGWQVTLYCADE 305 (676)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHT------TTCEEEEEESSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHH------CCCeEEEEeCCC
Confidence 345899999999999999999998 788999999964
No 138
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.36 E-value=6.1e-07 Score=91.30 Aligned_cols=35 Identities=26% Similarity=0.509 Sum_probs=31.9
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
..+||+|||||++|+++|+.|++ .|++|+|||++.
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~------~G~~V~lle~~~ 38 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAK------RGEEVTVIEKRF 38 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHH------TTCCEEEECSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHH------CCCeEEEEeCCC
Confidence 34799999999999999999999 688999999974
No 139
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.33 E-value=7.4e-07 Score=92.59 Aligned_cols=36 Identities=31% Similarity=0.370 Sum_probs=32.5
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCC-EEEEEcCCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSER 119 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~~~ 119 (538)
..+||||||||++|+++|++|++ .|+ +|+|||+++.
T Consensus 5 ~~~dVvIIGgG~aGlsaA~~La~------~G~~~V~vlE~~~~ 41 (438)
T 3dje_A 5 KSSSLLIVGAGTWGTSTALHLAR------RGYTNVTVLDPYPV 41 (438)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHH------TTCCCEEEEESSCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHH------cCCCcEEEEeCCCC
Confidence 45799999999999999999999 688 9999999763
No 140
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.33 E-value=3.3e-07 Score=87.60 Aligned_cols=39 Identities=33% Similarity=0.323 Sum_probs=34.1
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCccc
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF 122 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~ 122 (538)
|..||+|||||||||+||..|++ .|++|+|||+++..+.
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~------~G~~V~v~Ek~~~~GG 39 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTA------AGHQVHLFDKSRGSGG 39 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCG
T ss_pred CCCCEEEECcCHHHHHHHHHHHH------CCCCEEEEECCCCCCC
Confidence 34799999999999999999999 7889999999886543
No 141
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.33 E-value=5.7e-07 Score=92.73 Aligned_cols=100 Identities=23% Similarity=0.304 Sum_probs=75.7
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe-
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (538)
.++|+|||||+.|+.+|..|++ .|.+|+++++.+.+... . ....+...+.+.+++.+++++.+
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~------~g~~Vtvv~~~~~~l~~-----~-----~~~~~~~~l~~~l~~~GV~i~~~~ 206 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARK------LGLSVTILEAGDELLVR-----V-----LGRRIGAWLRGLLTELGVQVELGT 206 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSSHH-----H-----HCHHHHHHHHHHHHHHTCEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHh------CCCeEEEEecCCccchh-----h-----cCHHHHHHHHHHHHHCCCEEEeCC
Confidence 5799999999999999999998 57799999998763210 0 01223344566667789999974
Q ss_pred eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCC
Q 009310 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (538)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~ 205 (538)
.++.+..+.+. ..+.+++|+.+.+|.||+|+|..|+.
T Consensus 207 ~v~~i~~~~~~-----------~~v~~~dg~~i~aD~Vv~a~G~~p~~ 243 (410)
T 3ef6_A 207 GVVGFSGEGQL-----------EQVMASDGRSFVADSALICVGAEPAD 243 (410)
T ss_dssp CEEEEECSSSC-----------CEEEETTSCEEECSEEEECSCEEECC
T ss_pred EEEEEeccCcE-----------EEEEECCCCEEEcCEEEEeeCCeecH
Confidence 88888765431 25778888899999999999988764
No 142
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.33 E-value=3e-07 Score=93.68 Aligned_cols=36 Identities=19% Similarity=0.345 Sum_probs=32.8
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCc
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~ 120 (538)
++||+||||||||+++|+.|++ .|++|+|||+++..
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~------~G~~V~v~Er~~~~ 39 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAK------YGLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHH------CCCcEEEEeCCCCC
Confidence 4899999999999999999999 78899999997654
No 143
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.31 E-value=2.3e-06 Score=85.13 Aligned_cols=104 Identities=10% Similarity=0.049 Sum_probs=78.6
Q ss_pred CCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCC----cc------------CCCCC-----hhhHHHHHHHHHhCC
Q 009310 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVET----TI------------CPTGT-----PGNREAALKVLSARK 302 (538)
Q Consensus 244 ~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~----~~------------l~~~~-----~~~~~~~~~~l~~~g 302 (538)
.++|+|||+|+.|+.+|..|++.+.+ |+++++.+ .+ .+.++ .++...+.+.+++.|
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~g~~---v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 98 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARAEIK---PILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFG 98 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---CEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC---EEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcC
Confidence 36899999999999999999987655 99999843 11 12222 356677788889999
Q ss_pred CEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCC
Q 009310 303 VQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPH 377 (538)
Q Consensus 303 V~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~ 377 (538)
++++.++ |.+++.+. +.+.+... ...++..+.+|.+|+|+|.+|..+.
T Consensus 99 v~i~~~~-v~~i~~~~-----------------------~~~~v~~~---~~~~~~~~~~d~vvlAtG~~~~~~~ 146 (338)
T 3itj_A 99 TEIITET-VSKVDLSS-----------------------KPFKLWTE---FNEDAEPVTTDAIILATGASAKRMH 146 (338)
T ss_dssp CEEECSC-EEEEECSS-----------------------SSEEEEET---TCSSSCCEEEEEEEECCCEEECCCC
T ss_pred CEEEEeE-EEEEEEcC-----------------------CEEEEEEE---ecCCCcEEEeCEEEECcCCCcCCCC
Confidence 9999998 98888754 45666532 1225678999999999999877543
No 144
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.31 E-value=9.8e-07 Score=95.05 Aligned_cols=36 Identities=17% Similarity=0.403 Sum_probs=32.8
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCc
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~ 120 (538)
.+||||||||+|||+||..|++ .|++|+|||+.+..
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~------~G~~V~vlEk~~~~ 161 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATD------SGAKVILIEKEPVI 161 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH------CCCcEEEEeCCCCC
Confidence 5799999999999999999998 68899999998754
No 145
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.31 E-value=4.5e-07 Score=91.94 Aligned_cols=35 Identities=23% Similarity=0.243 Sum_probs=31.8
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
.+||+|||||++|+++|++|++ .|++|+|||+++.
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~------~G~~V~vle~~~~ 36 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATR------AGLNVLMTDAHMP 36 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHH------TTCCEEEECSSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHH------CCCeEEEEecCCC
Confidence 4799999999999999999999 6889999999753
No 146
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.30 E-value=1.2e-06 Score=91.97 Aligned_cols=101 Identities=20% Similarity=0.246 Sum_probs=73.9
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe-
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (538)
.++|+|||||+.|+.+|..|++ .|.+|+|+|+.+.+. . . ...++...+.+.+++.+++++.+
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~------~g~~Vtlv~~~~~~l---------~-~-~~~~~~~~l~~~l~~~gV~i~~~~ 231 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRR------LGAEVTLIEYMPEIL---------P-Q-GDPETAALLRRALEKEGIRVRTKT 231 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSS---------T-T-SCHHHHHHHHHHHHHTTCEEECSE
T ss_pred CCEEEEECCCHHHHHHHHHHHH------CCCeEEEEEcCCccc---------c-c-cCHHHHHHHHHHHHhcCCEEEcCC
Confidence 4799999999999999999998 578999999987631 1 1 11233345566677889999986
Q ss_pred eEEEEcCCCCcCcCCCceeecccEEEcC-C--ce--EEEeeEEEEeCCCCCCCCC
Q 009310 158 RVKLLCPSDHLGVNGPMACTHGGTVLLE-S--GL--IVEYDWLVLSLGAEPKLDV 207 (538)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~-~--g~--~~~yD~lVlAtG~~~~~p~ 207 (538)
+++.++.+... ..+.++ + |+ .+.+|.||+|+|..|+...
T Consensus 232 ~v~~i~~~~~~-----------~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~ 275 (464)
T 2eq6_A 232 KAVGYEKKKDG-----------LHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEG 275 (464)
T ss_dssp EEEEEEEETTE-----------EEEEEEETTCCSCEEEEESEEEECSCEEESCTT
T ss_pred EEEEEEEeCCE-----------EEEEEeecCCCceeEEEcCEEEECCCcccCCCC
Confidence 88888654321 134443 4 55 8999999999999887653
No 147
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.30 E-value=2.5e-06 Score=85.51 Aligned_cols=94 Identities=14% Similarity=0.137 Sum_probs=73.2
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccC---------------------CCCC-----------hhhHH
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTIC---------------------PTGT-----------PGNRE 292 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l---------------------~~~~-----------~~~~~ 292 (538)
.+|+|||+|+.|+.+|..|++.+.+ |+++++.+.+. +.++ ..+.+
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~---v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLS---YVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLA 80 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCC---EEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCC---EEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHH
Confidence 3799999999999999999887654 99999876431 1110 45667
Q ss_pred HHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceE-EeecccccCCcceEEeccEEEEecCC
Q 009310 293 AALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYI-LELQPAIKGLESQIFEADLVLWTVGS 371 (538)
Q Consensus 293 ~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~g~~l~~D~vI~a~G~ 371 (538)
.+.+.+++.|++++.++.|++++.++ +.+. +... ++ ++.+|.||+|+|.
T Consensus 81 ~l~~~~~~~~~~~~~~~~v~~i~~~~-----------------------~~~~~v~~~------~g-~~~~d~vV~AtG~ 130 (357)
T 4a9w_A 81 YLAQYEQKYALPVLRPIRVQRVSHFG-----------------------ERLRVVARD------GR-QWLARAVISATGT 130 (357)
T ss_dssp HHHHHHHHTTCCEECSCCEEEEEEET-----------------------TEEEEEETT------SC-EEEEEEEEECCCS
T ss_pred HHHHHHHHcCCEEEcCCEEEEEEECC-----------------------CcEEEEEeC------CC-EEEeCEEEECCCC
Confidence 77888889999999999999998754 4555 5422 44 8999999999996
No 148
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.30 E-value=1.9e-06 Score=88.87 Aligned_cols=101 Identities=18% Similarity=0.275 Sum_probs=76.7
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe-
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (538)
.++|+|||||+.|+.+|..|++ .|.+|+++++.+.+. .......+...+.+.+++.+++++.+
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~------~g~~Vtvv~~~~~~l----------~~~~~~~~~~~l~~~l~~~GV~i~~~~ 215 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTK------FGVNVTLLEALPRVL----------ARVAGEALSEFYQAEHRAHGVDLRTGA 215 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSSSTT----------TTTSCHHHHHHHHHHHHHTTCEEEETC
T ss_pred CCeEEEECCCHHHHHHHHHHHh------cCCeEEEEecCCchh----------hhhcCHHHHHHHHHHHHhCCCEEEECC
Confidence 6899999999999999999998 678999999987631 11112334445666777889999975
Q ss_pred eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCC
Q 009310 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (538)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~ 205 (538)
.|+.+..+... ...+.+++|+.+.+|.||+|+|..|+.
T Consensus 216 ~v~~i~~~~~~----------v~~v~l~dG~~i~aD~Vv~a~G~~p~~ 253 (415)
T 3lxd_A 216 AMDCIEGDGTK----------VTGVRMQDGSVIPADIVIVGIGIVPCV 253 (415)
T ss_dssp CEEEEEESSSB----------EEEEEESSSCEEECSEEEECSCCEESC
T ss_pred EEEEEEecCCc----------EEEEEeCCCCEEEcCEEEECCCCccCh
Confidence 88888654321 014777888899999999999988764
No 149
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.30 E-value=6.2e-07 Score=91.57 Aligned_cols=99 Identities=14% Similarity=0.158 Sum_probs=73.2
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCCChhhH-------------HHHHHHHHhCCCEEEcCcee
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNR-------------EAALKVLSARKVQLVLGYFV 311 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~~-------------~~~~~~l~~~gV~v~~~~~V 311 (538)
-+|+|||||+.|+.+|..|... ...|+++++.+.+... .+.+. ....+.+++.||+++++++|
T Consensus 10 ~~~vIvGgG~AGl~aA~~L~~~---~~~itlie~~~~~~y~-~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V 85 (385)
T 3klj_A 10 TKILILGAGPAGFSAAKAALGK---CDDITMINSEKYLPYY-RPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFA 85 (385)
T ss_dssp CSEEEECCSHHHHHHHHHHTTT---CSCEEEECSSSSCCBC-GGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCE
T ss_pred CCEEEEcCcHHHHHHHHHHhCC---CCEEEEEECCCCCCcc-cChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEE
Confidence 4899999999999999999332 2349999997764211 11111 22345678899999999999
Q ss_pred eEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCC
Q 009310 312 RCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHV 378 (538)
Q Consensus 312 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l 378 (538)
++++.+. +.|++. +++++.+|.+|+|||.+|..+.+
T Consensus 86 ~~id~~~-----------------------~~v~~~--------~g~~~~yd~lvlAtG~~p~~p~i 121 (385)
T 3klj_A 86 TSIDPNN-----------------------KLVTLK--------SGEKIKYEKLIIASGSIANKIKV 121 (385)
T ss_dssp EEEETTT-----------------------TEEEET--------TSCEEECSEEEECCCEEECCCCC
T ss_pred EEEECCC-----------------------CEEEEC--------CCCEEECCEEEEecCCCcCCCCC
Confidence 9998754 445443 67899999999999998875443
No 150
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.29 E-value=2.2e-06 Score=84.65 Aligned_cols=101 Identities=20% Similarity=0.207 Sum_probs=75.2
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecC--Ccc--------CCCCC----hhhHHHHHHHHHhCCCEEEcCce
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVE--TTI--------CPTGT----PGNREAALKVLSARKVQLVLGYF 310 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~--~~~--------l~~~~----~~~~~~~~~~l~~~gV~v~~~~~ 310 (538)
.+|+|||+|+.|+.+|..|++.+.+ |+++++. ..+ .+.++ .++.+.+.+.+++.|++++. ..
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~ 91 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYMLK---TLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL-DI 91 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEE-SC
T ss_pred cCEEEECccHHHHHHHHHHHHCCCc---EEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEE-EE
Confidence 4899999999999999999987655 9999985 111 12221 34566677788889999999 88
Q ss_pred eeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCC
Q 009310 311 VRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHV 378 (538)
Q Consensus 311 V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l 378 (538)
|.+++.++ +.+.+... ++.++.+|.+|+|+|..|..+.+
T Consensus 92 v~~i~~~~-----------------------~~~~v~~~------~g~~~~~d~lvlAtG~~~~~~~i 130 (323)
T 3f8d_A 92 VEKIENRG-----------------------DEFVVKTK------RKGEFKADSVILGIGVKRRKLGV 130 (323)
T ss_dssp EEEEEEC-------------------------CEEEEES------SSCEEEEEEEEECCCCEECCCCC
T ss_pred EEEEEecC-----------------------CEEEEEEC------CCCEEEcCEEEECcCCCCccCCC
Confidence 99988754 44555532 56789999999999999775433
No 151
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.29 E-value=6.8e-07 Score=93.58 Aligned_cols=99 Identities=22% Similarity=0.334 Sum_probs=72.7
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe-
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (538)
.++|+|||||+.|+.+|..|++ .|.+|+|+|+.+.+. . . ...++...+.+.+++.+++++.+
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~------~g~~Vtlv~~~~~~l---------~-~-~~~~~~~~l~~~l~~~gv~i~~~~ 233 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRK------LGAQVSVVEARERIL---------P-T-YDSELTAPVAESLKKLGIALHLGH 233 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH------HTCEEEEECSSSSSS---------T-T-SCHHHHHHHHHHHHHHTCEEETTC
T ss_pred CCeEEEECcCHHHHHHHHHHHH------CCCeEEEEEcCCccc---------c-c-cCHHHHHHHHHHHHHCCCEEEECC
Confidence 5799999999999999999998 567999999987631 1 1 11233344556666779999875
Q ss_pred eEEEEcCCCCcCcCCCceeecccEEEcCCc--eEEEeeEEEEeCCCCCCCCC
Q 009310 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESG--LIVEYDWLVLSLGAEPKLDV 207 (538)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g--~~~~yD~lVlAtG~~~~~p~ 207 (538)
.|+.++. .+. .+..++| ..+.+|.||+|+|.+|+.+.
T Consensus 234 ~v~~i~~-~~v------------~v~~~~G~~~~i~~D~vv~a~G~~p~~~~ 272 (458)
T 1lvl_A 234 SVEGYEN-GCL------------LANDGKGGQLRLEADRVLVAVGRRPRTKG 272 (458)
T ss_dssp EEEEEET-TEE------------EEECSSSCCCEECCSCEEECCCEEECCSS
T ss_pred EEEEEEe-CCE------------EEEECCCceEEEECCEEEECcCCCcCCCC
Confidence 8888865 321 2443345 58999999999999887653
No 152
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.29 E-value=1.2e-06 Score=93.56 Aligned_cols=36 Identities=31% Similarity=0.563 Sum_probs=32.5
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
..++|+|||||++|+++|+.|++ .|++|+|||+.+.
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~------~G~~v~viEr~~~ 39 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLAR------QGVRVLVVERRPG 39 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHT------TTCCEEEECSSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHH------CCCCEEEEeCCCC
Confidence 34799999999999999999998 6889999999863
No 153
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.29 E-value=1.9e-06 Score=90.93 Aligned_cols=101 Identities=19% Similarity=0.344 Sum_probs=74.6
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (538)
..++|+|||||+.|+.+|..|++ .|.+|+|+++.+.+. ... ...++...+.+.+++.+++++.+
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~------~g~~Vtlv~~~~~~l---------~~~-~~~~~~~~l~~~l~~~GV~i~~~ 256 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQR------KGKEVVLIDVVDTCL---------AGY-YDRDLTDLMAKNMEEHGIQLAFG 256 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSSSTT---------TTT-SCHHHHHHHHHHHHTTTCEEEET
T ss_pred CCceEEEECCCHHHHHHHHHHHH------CCCeEEEEEcccchh---------hhH-HHHHHHHHHHHHHHhCCeEEEeC
Confidence 45899999999999999999998 577999999987631 101 11233445666777889999986
Q ss_pred -eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCC
Q 009310 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLD 206 (538)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p 206 (538)
++++++.+.+. ..+.+ ++..+.+|.||+|+|..|+.+
T Consensus 257 ~~v~~i~~~~~v-----------~~v~~-~g~~i~~D~Vi~a~G~~p~~~ 294 (490)
T 2bc0_A 257 ETVKEVAGNGKV-----------EKIIT-DKNEYDVDMVILAVGFRPNTT 294 (490)
T ss_dssp CCEEEEECSSSC-----------CEEEE-SSCEEECSEEEECCCEEECCG
T ss_pred CEEEEEEcCCcE-----------EEEEE-CCcEEECCEEEECCCCCcChH
Confidence 88888754321 12444 566899999999999887654
No 154
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.28 E-value=1.5e-06 Score=90.72 Aligned_cols=101 Identities=20% Similarity=0.277 Sum_probs=75.1
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe-
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (538)
.++|+|||||+.|+.+|..|++ .|.+|+|+|+.+... ...+ .++...+.+.+++.+++++.+
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~------~g~~Vtlv~~~~~~l----------~~~~-~~~~~~l~~~l~~~Gv~i~~~~ 229 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVING------LGAKTHLFEMFDAPL----------PSFD-PMISETLVEVMNAEGPQLHTNA 229 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSS----------TTSC-HHHHHHHHHHHHHHSCEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHh------cCCEEEEEEeCCchh----------hhhh-HHHHHHHHHHHHHCCCEEEeCC
Confidence 5799999999999999999998 577999999987631 1111 223344556666779999986
Q ss_pred eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCC
Q 009310 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLD 206 (538)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p 206 (538)
++++++.+... ...+.+++|+.+.+|.||+|+|..|+..
T Consensus 230 ~v~~i~~~~~~----------~~~v~~~~g~~i~~D~vv~a~G~~p~~~ 268 (450)
T 1ges_A 230 IPKAVVKNTDG----------SLTLELEDGRSETVDCLIWAIGREPAND 268 (450)
T ss_dssp CEEEEEECTTS----------CEEEEETTSCEEEESEEEECSCEEESCT
T ss_pred EEEEEEEeCCc----------EEEEEECCCcEEEcCEEEECCCCCcCCC
Confidence 78888654210 0146777888899999999999988764
No 155
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.28 E-value=1.9e-06 Score=89.49 Aligned_cols=96 Identities=15% Similarity=0.314 Sum_probs=75.6
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe-
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (538)
.++|+|||||+.|+.+|..+++ .|.+|+|+++.+.+. . ....++...+.+.+++.+++++.+
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~------~g~~Vtlv~~~~~ll----------~-~~d~~~~~~~~~~l~~~gV~i~~~~ 209 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYE------RGLHPTLIHRSDKIN----------K-LMDADMNQPILDELDKREIPYRLNE 209 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------HTCEEEEEESSSCCS----------T-TSCGGGGHHHHHHHHHTTCCEEESC
T ss_pred CcEEEEECCccchhhhHHHHHh------cCCcceeeeeecccc----------c-cccchhHHHHHHHhhccceEEEecc
Confidence 5689999999999999999998 567999999987631 1 112344556777788889999986
Q ss_pred eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCC
Q 009310 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLD 206 (538)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p 206 (538)
+|+.++.. .+.+++++.+.+|.+++|+|..|+..
T Consensus 210 ~v~~~~~~---------------~v~~~~g~~~~~D~vl~a~G~~Pn~~ 243 (437)
T 4eqs_A 210 EINAINGN---------------EITFKSGKVEHYDMIIEGVGTHPNSK 243 (437)
T ss_dssp CEEEEETT---------------EEEETTSCEEECSEEEECCCEEESCG
T ss_pred EEEEecCC---------------eeeecCCeEEeeeeEEEEeceecCcH
Confidence 77777532 57788899999999999999887643
No 156
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.28 E-value=1.2e-06 Score=88.87 Aligned_cols=92 Identities=29% Similarity=0.422 Sum_probs=71.8
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe-e
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD-R 158 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~-~ 158 (538)
++|+|||||+.|+.+|..|++ .|.+|+++++.+.+. . ...++...+.+.+++.+++++.+ +
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~~l---------~---~~~~~~~~l~~~l~~~gV~i~~~~~ 205 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAE------AGYHVKLIHRGAMFL---------G---LDEELSNMIKDMLEETGVKFFLNSE 205 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHH------TTCEEEEECSSSCCT---------T---CCHHHHHHHHHHHHHTTEEEECSCC
T ss_pred CcEEEECCCHHHHHHHHHHHh------CCCEEEEEeCCCeec---------c---CCHHHHHHHHHHHHHCCCEEEcCCE
Confidence 789999999999999999998 577999999987631 1 11233445566777889999986 7
Q ss_pred EEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCC
Q 009310 159 VKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (538)
Q Consensus 159 v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~ 205 (538)
++.++.. .+.+++|+ +.+|.||+|+|..|+.
T Consensus 206 v~~i~~~---------------~v~~~~g~-i~~D~vi~a~G~~p~~ 236 (367)
T 1xhc_A 206 LLEANEE---------------GVLTNSGF-IEGKVKICAIGIVPNV 236 (367)
T ss_dssp EEEECSS---------------EEEETTEE-EECSCEEEECCEEECC
T ss_pred EEEEEee---------------EEEECCCE-EEcCEEEECcCCCcCH
Confidence 8888621 46677887 9999999999988764
No 157
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.28 E-value=4.1e-06 Score=87.42 Aligned_cols=102 Identities=16% Similarity=0.148 Sum_probs=76.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe-
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (538)
.++++|||||+.|+.+|..|++ .|.+|+++++.+.+. ......++...+.+.+++.+++++.+
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~~l----------~~~~d~~~~~~l~~~l~~~GV~i~~~~ 210 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVK------MKKTVHVFESLENLL----------PKYFDKEMVAEVQKSLEKQAVIFHFEE 210 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSSSSS----------TTTCCHHHHHHHHHHHHTTTEEEEETC
T ss_pred CCEEEEECCCHHHHHHHHHHHh------CCCeEEEEEccCccc----------cccCCHHHHHHHHHHHHHcCCEEEeCC
Confidence 4789999999999999999998 577999999987631 11112334455667778889999985
Q ss_pred eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCCCC
Q 009310 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDVV 208 (538)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p~i 208 (538)
.|+++...... ..+.++++ .+.+|.||+|+|..|+....
T Consensus 211 ~v~~i~~~~~~-----------v~v~~~~g-~i~aD~Vv~A~G~~p~~~~l 249 (452)
T 3oc4_A 211 TVLGIEETANG-----------IVLETSEQ-EISCDSGIFALNLHPQLAYL 249 (452)
T ss_dssp CEEEEEECSSC-----------EEEEESSC-EEEESEEEECSCCBCCCSSC
T ss_pred EEEEEEccCCe-----------EEEEECCC-EEEeCEEEECcCCCCChHHH
Confidence 88888633221 03566666 89999999999998876543
No 158
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.27 E-value=9e-07 Score=90.20 Aligned_cols=35 Identities=23% Similarity=0.379 Sum_probs=31.9
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
.+||+|||||++|+++|+.|++ .|++|+|||+++.
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~------~G~~V~vie~~~~ 37 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAK------QGVKTLLVDAFDP 37 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSCS
T ss_pred cCCEEEECCCHHHHHHHHHHHh------CCCeEEEEeCCCC
Confidence 4799999999999999999999 6889999999753
No 159
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.27 E-value=4.2e-07 Score=92.31 Aligned_cols=34 Identities=18% Similarity=0.412 Sum_probs=30.6
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
.+++|+|||||++|+++|++|++ |++|+|+|+++
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La~-------G~~V~vlE~~~ 41 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLSA-------HGRVVVLEREA 41 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-------TSCEEEECSSS
T ss_pred CcCCEEEECCcHHHHHHHHHHhC-------CCCEEEEECCC
Confidence 45899999999999999999984 57999999985
No 160
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.27 E-value=1.8e-06 Score=85.63 Aligned_cols=100 Identities=16% Similarity=0.146 Sum_probs=75.6
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccC---------------CCC----ChhhHHHHHHHHHhCCCEE
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTIC---------------PTG----TPGNREAALKVLSARKVQL 305 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l---------------~~~----~~~~~~~~~~~l~~~gV~v 305 (538)
.+|+|||+|+.|+.+|..|++.+.+ |+++++.+.+. +.+ ..++...+.+.+++.|+++
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQAS---VKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTI 84 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEE
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCC---EEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcE
Confidence 4899999999999999999886554 99999976432 111 2455667777888899999
Q ss_pred EcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCC---CCCCC
Q 009310 306 VLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGS---KPLLP 376 (538)
Q Consensus 306 ~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~---~p~~~ 376 (538)
++++.|.+++.+.+ +.+.+.+. +++ +.+|.||+|+|. .|..+
T Consensus 85 ~~~~~v~~i~~~~~----------------------~~~~v~~~------~g~-~~~d~vVlAtG~~~~~p~~~ 129 (332)
T 3lzw_A 85 CLEQAVESVEKQAD----------------------GVFKLVTN------EET-HYSKTVIITAGNGAFKPRKL 129 (332)
T ss_dssp ECSCCEEEEEECTT----------------------SCEEEEES------SEE-EEEEEEEECCTTSCCEECCC
T ss_pred EccCEEEEEEECCC----------------------CcEEEEEC------CCE-EEeCEEEECCCCCcCCCCCC
Confidence 99999999987541 24455432 454 999999999999 66643
No 161
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.26 E-value=1.8e-06 Score=90.41 Aligned_cols=100 Identities=22% Similarity=0.374 Sum_probs=74.9
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe-
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (538)
.++|+|||||+.|+.+|..|++ .|.+|+++++.+.... ..+ .++...+.+.+++.+++++.+
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~------~G~~Vtlv~~~~~~l~----------~~~-~~~~~~l~~~l~~~gv~i~~~~ 228 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRS------FGSEVTVVALEDRLLF----------QFD-PLLSATLAENMHAQGIETHLEF 228 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSST----------TSC-HHHHHHHHHHHHHTTCEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHh------cCCEEEEEEcCCcccc----------ccC-HHHHHHHHHHHHHCCCEEEeCC
Confidence 4799999999999999999998 5779999999875321 111 223344566677789999886
Q ss_pred eEEEEcCCCCcCcCCCceeecccEEEcCCce-EEEeeEEEEeCCCCCCCC
Q 009310 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGL-IVEYDWLVLSLGAEPKLD 206 (538)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~-~~~yD~lVlAtG~~~~~p 206 (538)
.++.++.+... ..+.+++|+ .+.+|.||+|+|..|+..
T Consensus 229 ~v~~i~~~~~~-----------~~v~~~~G~~~i~~D~vv~a~G~~p~~~ 267 (463)
T 2r9z_A 229 AVAALERDAQG-----------TTLVAQDGTRLEGFDSVIWAVGRAPNTR 267 (463)
T ss_dssp CEEEEEEETTE-----------EEEEETTCCEEEEESEEEECSCEEESCT
T ss_pred EEEEEEEeCCe-----------EEEEEeCCcEEEEcCEEEECCCCCcCCC
Confidence 78888643210 156777888 899999999999988764
No 162
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.25 E-value=9e-07 Score=90.82 Aligned_cols=100 Identities=19% Similarity=0.060 Sum_probs=71.5
Q ss_pred CCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCC-C---------ChhhHHHHHHHHHhCCCEEEcCceeeE
Q 009310 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT-G---------TPGNREAALKVLSARKVQLVLGYFVRC 313 (538)
Q Consensus 244 ~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~-~---------~~~~~~~~~~~l~~~gV~v~~~~~V~~ 313 (538)
+|+|+|||+|+.|+.+|..|++.+.+ ..|++|++.+..... . +.+....-.+.+.++||+++.+ .|+.
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~-~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~~-~v~~ 79 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPS-IEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVHD-SALG 79 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTT-SEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEECS-CEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcC-CeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEEe-EEEE
Confidence 78999999999999999999876543 239999987653211 0 1111011124566789999876 6888
Q ss_pred EeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCC
Q 009310 314 IRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLP 376 (538)
Q Consensus 314 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~ 376 (538)
|+.+. +.+++. +++++++|.+|+|+|.+++.+
T Consensus 80 id~~~-----------------------~~v~~~--------~g~~i~yd~LviAtG~~~~~~ 111 (401)
T 3vrd_B 80 IDPDK-----------------------KLVKTA--------GGAEFAYDRCVVAPGIDLLYD 111 (401)
T ss_dssp EETTT-----------------------TEEEET--------TSCEEECSEEEECCCEEECGG
T ss_pred EEccC-----------------------cEEEec--------ccceeecceeeeccCCccccC
Confidence 88754 344443 788999999999999987744
No 163
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.24 E-value=1.8e-06 Score=88.71 Aligned_cols=101 Identities=25% Similarity=0.375 Sum_probs=76.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe-
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (538)
.++|+|||+|+.|+.+|..|++ .|.+|+++++.+.+. .......+...+.+.+++.+++++.+
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~------~g~~Vtvv~~~~~~~----------~~~~~~~~~~~l~~~l~~~GV~i~~~~ 205 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARA------KGLEVDVVELAPRVM----------ARVVTPEISSYFHDRHSGAGIRMHYGV 205 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSTT----------TTTSCHHHHHHHHHHHHHTTCEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHh------CCCEEEEEeCCCcch----------hhccCHHHHHHHHHHHHhCCcEEEECC
Confidence 4789999999999999999998 678999999987632 11112334445666777889999986
Q ss_pred eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCC
Q 009310 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (538)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~ 205 (538)
.|+.+..+... ...+.+++|+.+.+|.||+|+|..|+.
T Consensus 206 ~v~~i~~~~~~----------v~~V~~~dG~~i~aD~Vv~a~G~~p~~ 243 (404)
T 3fg2_P 206 RATEIAAEGDR----------VTGVVLSDGNTLPCDLVVVGVGVIPNV 243 (404)
T ss_dssp CEEEEEEETTE----------EEEEEETTSCEEECSEEEECCCEEECC
T ss_pred EEEEEEecCCc----------EEEEEeCCCCEEEcCEEEECcCCccCH
Confidence 88888654210 014777888899999999999988754
No 164
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.24 E-value=1.5e-06 Score=90.40 Aligned_cols=102 Identities=15% Similarity=0.176 Sum_probs=73.1
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCC--C---------ChhhHHHHHHHHHhCCCEEEcCceeeE
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT--G---------TPGNREAALKVLSARKVQLVLGYFVRC 313 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~--~---------~~~~~~~~~~~l~~~gV~v~~~~~V~~ 313 (538)
++|+|||||+.|+++|..|++.......|+++++.+.+... . ...+...+.+.+++.||+++. ..++.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~ 83 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIA-QSAEQ 83 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEEC-SCEEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEE-eEEEE
Confidence 68999999999999999998843322349999998764211 0 011122235677889999985 58888
Q ss_pred EeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCC
Q 009310 314 IRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHV 378 (538)
Q Consensus 314 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l 378 (538)
++.+. +.|++. +++++.+|.+|+|+|.+|+.+.+
T Consensus 84 id~~~-----------------------~~V~~~--------~g~~i~~d~lviAtG~~~~~~~i 117 (437)
T 3sx6_A 84 IDAEA-----------------------QNITLA--------DGNTVHYDYLMIATGPKLAFENV 117 (437)
T ss_dssp EETTT-----------------------TEEEET--------TSCEEECSEEEECCCCEECGGGS
T ss_pred EEcCC-----------------------CEEEEC--------CCCEEECCEEEECCCCCcCcccC
Confidence 88754 344443 67789999999999999875443
No 165
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.24 E-value=3.7e-06 Score=88.94 Aligned_cols=101 Identities=12% Similarity=0.217 Sum_probs=75.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe-
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (538)
.++|+|||||+.|+.+|..|++ .|.+|+++++.+.+. + .. ..++...+.+.+++.+++++.+
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~------~g~~Vtlv~~~~~~l--~--------~~-d~~~~~~l~~~l~~~gv~i~~~~ 238 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKR------LGIDSYIFARGNRIL--R--------KF-DESVINVLENDMKKNNINIVTFA 238 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHT------TTCEEEEECSSSSSC--T--------TS-CHHHHHHHHHHHHHTTCEEECSC
T ss_pred CCeEEEECChHHHHHHHHHHHH------cCCeEEEEecCCccC--c--------cc-chhhHHHHHHHHHhCCCEEEECC
Confidence 5799999999999999999988 577999999987631 1 11 1233345566777889999986
Q ss_pred eEEEEcCCCCcCcCCCceeecccEEEcCCceE-EEeeEEEEeCCCCCCCC
Q 009310 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLI-VEYDWLVLSLGAEPKLD 206 (538)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~-~~yD~lVlAtG~~~~~p 206 (538)
.++.++.+..- ...+.+++|+. +.+|.||+|+|..|+..
T Consensus 239 ~v~~i~~~~~~----------~~~v~~~~g~~~~~~D~vi~a~G~~p~~~ 278 (500)
T 1onf_A 239 DVVEIKKVSDK----------NLSIHLSDGRIYEHFDHVIYCVGRSPDTE 278 (500)
T ss_dssp CEEEEEESSTT----------CEEEEETTSCEEEEESEEEECCCBCCTTT
T ss_pred EEEEEEEcCCc----------eEEEEECCCcEEEECCEEEECCCCCcCCC
Confidence 78888653210 01466777877 99999999999998763
No 166
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.24 E-value=1.5e-06 Score=87.05 Aligned_cols=37 Identities=19% Similarity=0.302 Sum_probs=31.2
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
+||+|||||++|+++|+.|++.. ..|++|+|||+++.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~---~~G~~V~v~Ek~~~ 38 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQT---SGPLYLAVWDKADD 38 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC----CCEEEEEECSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhc---cCCceEEEEECCCC
Confidence 58999999999999999998721 15789999999864
No 167
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.23 E-value=2.1e-06 Score=90.29 Aligned_cols=100 Identities=20% Similarity=0.298 Sum_probs=73.6
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe-
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (538)
.++|+|||||+.|+.+|..|++ .|.+|+|+++.+.+. ... ..++...+.+.+++.+++++.+
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~------~g~~Vtlv~~~~~~l----------~~~-~~~~~~~l~~~l~~~gv~i~~~~ 245 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSR------LGSKVTVVEFQPQIG----------ASM-DGEVAKATQKFLKKQGLDFKLST 245 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSS----------SSS-CHHHHHHHHHHHHHTTCEEECSE
T ss_pred CceEEEECCCHHHHHHHHHHHH------cCCEEEEEEeCCccc----------ccc-CHHHHHHHHHHHHHCCCEEEeCC
Confidence 5799999999999999999998 677999999987631 111 1233445666777889999985
Q ss_pred eEEEEcC--CCCcCcCCCceeecccEEEcC-----CceEEEeeEEEEeCCCCCCCC
Q 009310 158 RVKLLCP--SDHLGVNGPMACTHGGTVLLE-----SGLIVEYDWLVLSLGAEPKLD 206 (538)
Q Consensus 158 ~v~~i~~--~~~~~~~~~~~~~~~~~v~~~-----~g~~~~yD~lVlAtG~~~~~p 206 (538)
.++.++. +... ..+.+. ++..+.+|.||+|+|..|+..
T Consensus 246 ~v~~i~~~~~~~~-----------~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~ 290 (478)
T 1v59_A 246 KVISAKRNDDKNV-----------VEIVVEDTKTNKQENLEAEVLLVAVGRRPYIA 290 (478)
T ss_dssp EEEEEEEETTTTE-----------EEEEEEETTTTEEEEEEESEEEECSCEEECCT
T ss_pred EEEEEEEecCCCe-----------EEEEEEEcCCCCceEEECCEEEECCCCCcCCC
Confidence 8888865 3221 123333 456899999999999988764
No 168
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.23 E-value=5.2e-07 Score=93.62 Aligned_cols=95 Identities=16% Similarity=0.199 Sum_probs=70.8
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCCChhhHH-------------HHHHHHHhCCCEEEcCcee
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNRE-------------AALKVLSARKVQLVLGYFV 311 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~~~-------------~~~~~l~~~gV~v~~~~~V 311 (538)
|+|+|||||+.|+.+|..|++.+.+ ..|++|++.+.+.. .+.+.. .+.+.+++.||+++.+ .|
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~-~~VtlI~~~~~~~~--~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~-~v 78 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPD-LKITLISDRPYFGF--TPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KA 78 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTT-CEEEEECSSSEEEC--GGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcC-CeEEEEcCCCCCcc--CccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEe-EE
Confidence 6899999999999999999877643 34999999875421 111111 1234567789999877 68
Q ss_pred eEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCC
Q 009310 312 RCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPL 374 (538)
Q Consensus 312 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~ 374 (538)
++|+.+. +.|+++ +|+++++|.+|+|+|.++.
T Consensus 79 ~~Id~~~-----------------------~~V~~~--------~g~~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 79 ESIDPDA-----------------------NTVTTQ--------SGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp EEEETTT-----------------------TEEEET--------TCCEEECSEEEECCCCEEE
T ss_pred EEEECCC-----------------------CEEEEC--------CCCEEECCEEEEeCCCCcc
Confidence 8998754 455554 7889999999999998754
No 169
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.23 E-value=2.3e-06 Score=89.39 Aligned_cols=102 Identities=18% Similarity=0.278 Sum_probs=73.5
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (538)
..++|+|||||+.|+.+|..|++ .|.+|+|+|+.+.+. . . ...++...+.+.+++.+++++.+
T Consensus 169 ~~~~vvViGgG~~g~e~A~~l~~------~g~~Vtlv~~~~~~l---------~-~-~~~~~~~~l~~~l~~~gv~i~~~ 231 (455)
T 1ebd_A 169 VPKSLVVIGGGYIGIELGTAYAN------FGTKVTILEGAGEIL---------S-G-FEKQMAAIIKKRLKKKGVEVVTN 231 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSSSSS---------T-T-SCHHHHHHHHHHHHHTTCEEEES
T ss_pred CCCeEEEECCCHHHHHHHHHHHH------cCCcEEEEEcCCccc---------c-c-cCHHHHHHHHHHHHHCCCEEEeC
Confidence 35799999999999999999998 577999999987631 1 0 11233344566677789999985
Q ss_pred -eEEEEcCCCCcCcCCCceeecccEEEcC---CceEEEeeEEEEeCCCCCCCCC
Q 009310 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLE---SGLIVEYDWLVLSLGAEPKLDV 207 (538)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~~~---~g~~~~yD~lVlAtG~~~~~p~ 207 (538)
++++++.+... ..+.+. ++..+.+|.||+|+|..|+...
T Consensus 232 ~~v~~i~~~~~~-----------~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~ 274 (455)
T 1ebd_A 232 ALAKGAEEREDG-----------VTVTYEANGETKTIDADYVLVTVGRRPNTDE 274 (455)
T ss_dssp EEEEEEEEETTE-----------EEEEEEETTEEEEEEESEEEECSCEEESCSS
T ss_pred CEEEEEEEeCCe-----------EEEEEEeCCceeEEEcCEEEECcCCCcccCc
Confidence 88888644320 023332 4568999999999999886543
No 170
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.23 E-value=1.3e-06 Score=93.97 Aligned_cols=58 Identities=19% Similarity=0.063 Sum_probs=40.1
Q ss_pred CCCeeeCCCccc-----CCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHC
Q 009310 393 RGQAETDETLCV-----KGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAIN 450 (538)
Q Consensus 393 ~G~i~vd~~l~~-----~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~ 450 (538)
.|.|.||+..|+ +..|++||+|+++.......+.-......++-.|+.+++++++...
T Consensus 502 ~GGl~vd~~~~vl~~~g~~I~GLyAaGe~~~g~~g~~~~~g~sl~~~~v~Gr~Ag~~aa~~~~ 564 (566)
T 1qo8_A 502 MGGVAINTTASVLDLQSKPIDGLFAAGEVTGGVHGYNRLGGNAIADTVVFGRIAGDNAAKHAL 564 (566)
T ss_dssp CCEECBCTTCEEEBTTSCEEEEEEECSTTBCSSSTTCCCTTHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cccEEECCCCeEECCCCCEeCCEEecccccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhh
Confidence 467888888774 2579999999998643221222223455688889999999987654
No 171
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.22 E-value=2.4e-06 Score=88.66 Aligned_cols=100 Identities=24% Similarity=0.357 Sum_probs=73.7
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe-
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (538)
.++|+|||||+.|+.+|..|++ .|.+|+++++.+... ......++...+.+.+++.+++++.+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~------~G~~Vtlv~~~~~~l----------~~~~~~~~~~~l~~~l~~~GV~i~~~~ 212 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIK------ANMHVTLLDTAARVL----------ERVTAPPVSAFYEHLHREAGVDIRTGT 212 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSTT----------TTTSCHHHHHHHHHHHHHHTCEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHh------CCCEEEEEEeCCccc----------cchhhHHHHHHHHHHHHhCCeEEEeCC
Confidence 5799999999999999999998 677999999987531 11111233334556666779999986
Q ss_pred eEEEEcC--C-CCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCC
Q 009310 158 RVKLLCP--S-DHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (538)
Q Consensus 158 ~v~~i~~--~-~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~ 205 (538)
.++.++. + .+. ..+.+++|..+.+|.||+|+|..|+.
T Consensus 213 ~v~~i~~~~~~~~v-----------~~v~~~~G~~i~~D~Vv~a~G~~p~~ 252 (431)
T 1q1r_A 213 QVCGFEMSTDQQKV-----------TAVLCEDGTRLPADLVIAGIGLIPNC 252 (431)
T ss_dssp CEEEEEECTTTCCE-----------EEEEETTSCEEECSEEEECCCEEECC
T ss_pred EEEEEEeccCCCcE-----------EEEEeCCCCEEEcCEEEECCCCCcCc
Confidence 8888864 2 221 14667788899999999999988753
No 172
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.21 E-value=1.4e-06 Score=89.27 Aligned_cols=35 Identities=26% Similarity=0.451 Sum_probs=31.8
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
..||+|||||++|+++|+.|++ +|++|+|||+.+.
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~------~G~~V~vlE~~~~ 38 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAE------RGHRVLVLERHTF 38 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHH------CCCeEEEEeCCCC
Confidence 3699999999999999999999 6889999999753
No 173
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.21 E-value=2e-06 Score=92.53 Aligned_cols=37 Identities=22% Similarity=0.385 Sum_probs=32.9
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCc
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~ 120 (538)
..++|+|||||+|||++|..|++ .|++|+|||+.+..
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~------~g~~v~~~e~~~~~ 161 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARD------AGAKVILLEKEPIP 161 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHS------SSCCEEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHH------CCCcEEEEecCCCC
Confidence 35799999999999999999998 68899999998753
No 174
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.21 E-value=3.5e-06 Score=88.56 Aligned_cols=102 Identities=17% Similarity=0.170 Sum_probs=73.8
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe-
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (538)
.++|+|||||+.|+.+|..|++ .|.+|+++++.+.+.-. . ...++...+.+.+++.+++++.+
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~~l~~---------~-~~~~~~~~l~~~l~~~Gv~i~~~~ 241 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQR------LGADVTAVEFLGHVGGV---------G-IDMEISKNFQRILQKQGFKFKLNT 241 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSSCS---------S-CCHHHHHHHHHHHHHTTCEEECSE
T ss_pred CceEEEECCCHHHHHHHHHHHH------cCCEEEEEeccCccCCc---------c-cCHHHHHHHHHHHHHCCCEEEeCc
Confidence 4799999999999999999998 57799999998763110 1 11233345666777889999985
Q ss_pred eEEEEcCCCCcCcCCCceeecccEEE-----cCCceEEEeeEEEEeCCCCCCCC
Q 009310 158 RVKLLCPSDHLGVNGPMACTHGGTVL-----LESGLIVEYDWLVLSLGAEPKLD 206 (538)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~-----~~~g~~~~yD~lVlAtG~~~~~p 206 (538)
+|+.++.+... . ..+. ..++..+.+|.||+|+|..|+..
T Consensus 242 ~v~~i~~~~~~-----~-----~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~ 285 (474)
T 1zmd_A 242 KVTGATKKSDG-----K-----IDVSIEAASGGKAEVITCDVLLVCIGRRPFTK 285 (474)
T ss_dssp EEEEEEECTTS-----C-----EEEEEEETTSCCCEEEEESEEEECSCEEECCT
T ss_pred eEEEEEEcCCc-----e-----EEEEEEecCCCCceEEEcCEEEECcCCCcCCC
Confidence 88888654320 0 0233 34567899999999999988654
No 175
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.21 E-value=1.9e-06 Score=88.23 Aligned_cols=35 Identities=31% Similarity=0.336 Sum_probs=31.2
Q ss_pred CCCeEEEECCcHHHHHHHHHhhh-cccCCCCC-CEEEEEcCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLES-LVWQDDKK-PQVLLVDQSE 118 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~-~~~~~~~g-~~V~lie~~~ 118 (538)
..+||+|||||++|+++|++|++ . | ++|+|||+++
T Consensus 20 ~~~dVvIIG~G~~Gl~~A~~La~~~------G~~~V~vlE~~~ 56 (405)
T 2gag_B 20 KSYDAIIVGGGGHGLATAYFLAKNH------GITNVAVLEKGW 56 (405)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHHH------CCCCEEEECSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHhc------CCCcEEEEeCCC
Confidence 45799999999999999999998 4 4 6999999976
No 176
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.21 E-value=7.1e-06 Score=81.66 Aligned_cols=96 Identities=16% Similarity=0.152 Sum_probs=72.5
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccC---------------CCCC----hhhHHHHHHHHHhCCCEE
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTIC---------------PTGT----PGNREAALKVLSARKVQL 305 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l---------------~~~~----~~~~~~~~~~l~~~gV~v 305 (538)
.+|+|||+|+.|+.+|..|++.+.+ |+++++.+.+. +.++ ..+.+.+.+.+++.++++
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 82 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGMRGLS---FRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVY 82 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCC---EEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEE
Confidence 4899999999999999999876554 99999875431 1111 345566667778889999
Q ss_pred EcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCC
Q 009310 306 VLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSK 372 (538)
Q Consensus 306 ~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~ 372 (538)
+.++.|..++.++ +.+.+.+. +++++.+|.||+|+|..
T Consensus 83 ~~~~~v~~i~~~~-----------------------~~~~v~~~------~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 83 SLGERAETLEREG-----------------------DLFKVTTS------QGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp EESCCEEEEEEET-----------------------TEEEEEET------TSCEEEEEEEEECCTTS
T ss_pred EeCCEEEEEEECC-----------------------CEEEEEEC------CCCEEEeCEEEECCCCC
Confidence 9999999998743 34444432 56789999999999994
No 177
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.20 E-value=3.2e-06 Score=89.25 Aligned_cols=105 Identities=19% Similarity=0.281 Sum_probs=77.1
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (538)
..++++|||||+.|+.+|..|+++. .+|.+|+++++.+.+. . .. ..++...+.+.+++.+++++.+
T Consensus 186 ~~~~vvViGgG~ig~E~A~~l~~~~---~~g~~Vtlv~~~~~~l---------~-~~-d~~~~~~l~~~l~~~GV~i~~~ 251 (490)
T 1fec_A 186 APKRALCVGGGYISIEFAGIFNAYK---ARGGQVDLAYRGDMIL---------R-GF-DSELRKQLTEQLRANGINVRTH 251 (490)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHS---CTTCEEEEEESSSSSS---------T-TS-CHHHHHHHHHHHHHTTEEEEET
T ss_pred cCCeEEEECCCHHHHHHHHHHHhhc---cCcCeEEEEEcCCCcc---------c-cc-CHHHHHHHHHHHHhCCCEEEeC
Confidence 3579999999999999999998841 1278999999987631 1 11 1233445666777889999986
Q ss_pred -eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCC
Q 009310 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLD 206 (538)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p 206 (538)
.|+.++.+..- ...+.+++|+.+.+|.||+|+|..|+..
T Consensus 252 ~~v~~i~~~~~~----------~~~v~~~~G~~i~~D~vv~a~G~~p~~~ 291 (490)
T 1fec_A 252 ENPAKVTKNADG----------TRHVVFESGAEADYDVVMLAIGRVPRSQ 291 (490)
T ss_dssp CCEEEEEECTTS----------CEEEEETTSCEEEESEEEECSCEEESCT
T ss_pred CEEEEEEEcCCC----------EEEEEECCCcEEEcCEEEEccCCCcCcc
Confidence 88888654310 0146677887899999999999988754
No 178
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.20 E-value=3.4e-06 Score=88.07 Aligned_cols=100 Identities=24% Similarity=0.313 Sum_probs=73.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe-
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (538)
.++|+|||||+.|+.+|..|++ .|.+|+++++.+.+.. .. ...++...+.+.+++.+++++.+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~~l~---------~~-~~~~~~~~l~~~l~~~Gv~i~~~~ 212 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSN------QNYNVNLIDGHERVLY---------KY-FDKEFTDILAKDYEAHGVNLVLGS 212 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHT------TTCEEEEEESSSSTTT---------TT-SCHHHHHHHHHHHHHTTCEEEESS
T ss_pred CCeEEEECcCHHHHHHHHHHHh------cCCEEEEEEcCCchhh---------hh-hhhhHHHHHHHHHHHCCCEEEcCC
Confidence 5789999999999999999988 5779999999876311 01 11233445666777889999986
Q ss_pred eEEEEcC-CCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCC
Q 009310 158 RVKLLCP-SDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLD 206 (538)
Q Consensus 158 ~v~~i~~-~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p 206 (538)
+|++++. +.+. ..+.+ ++.++.+|.||+|+|..|+..
T Consensus 213 ~v~~i~~~~~~v-----------~~v~~-~g~~i~~D~vv~a~G~~p~~~ 250 (452)
T 2cdu_A 213 KVAAFEEVDDEI-----------ITKTL-DGKEIKSDIAILCIGFRPNTE 250 (452)
T ss_dssp CEEEEEEETTEE-----------EEEET-TSCEEEESEEEECCCEEECCG
T ss_pred eeEEEEcCCCeE-----------EEEEe-CCCEEECCEEEECcCCCCCHH
Confidence 7888864 2221 02344 567899999999999987654
No 179
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.19 E-value=3.2e-06 Score=89.26 Aligned_cols=104 Identities=17% Similarity=0.262 Sum_probs=76.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe-
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (538)
.++++|||||+.|+.+|..|+++. ++|.+|++|++.+.+. + .. ..++...+.+.+++.+++++.+
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~---~~g~~Vtlv~~~~~~l--~--------~~-d~~~~~~l~~~l~~~GV~i~~~~ 256 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYK---PPGGKVTLCYRNNLIL--R--------GF-DETIREEVTKQLTANGIEIMTNE 256 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHC---CTTCEEEEEESSSSSC--T--------TS-CHHHHHHHHHHHHHTTCEEEESC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhC---CCCCeEEEEEcCCccc--c--------cc-CHHHHHHHHHHHHhCCCEEEeCC
Confidence 479999999999999999998841 1278999999987632 1 11 1233445666777889999986
Q ss_pred eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCC
Q 009310 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLD 206 (538)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p 206 (538)
.|+.++.+..- ...+.+++|+.+.+|.||+|+|..|+..
T Consensus 257 ~v~~i~~~~~~----------~~~v~~~~G~~i~~D~vv~a~G~~p~~~ 295 (495)
T 2wpf_A 257 NPAKVSLNTDG----------SKHVTFESGKTLDVDVVMMAIGRIPRTN 295 (495)
T ss_dssp CEEEEEECTTS----------CEEEEETTSCEEEESEEEECSCEEECCG
T ss_pred EEEEEEEcCCc----------eEEEEECCCcEEEcCEEEECCCCccccc
Confidence 88888654210 0146677888899999999999987653
No 180
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.19 E-value=2.3e-06 Score=90.56 Aligned_cols=38 Identities=16% Similarity=0.327 Sum_probs=33.8
Q ss_pred CCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 76 DKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 76 ~~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
..+.++|+||||||+|+++|..|++ .|++|+|||+.+.
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~------~G~~v~vlE~~~~ 45 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRL------AGVEVVVLERLVE 45 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHH------TTCCEEEEESCCC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHH------CCCCEEEEeCCCC
Confidence 3456899999999999999999999 7889999999764
No 181
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.19 E-value=2.9e-06 Score=89.27 Aligned_cols=102 Identities=16% Similarity=0.218 Sum_probs=74.8
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (538)
..++|+|||||+.|+.+|..|++ .|.+|+++++.+.... .. ..++...+.+.+++.+++++.+
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~------~g~~Vtlv~~~~~~l~----------~~-d~~~~~~l~~~l~~~Gv~i~~~ 246 (479)
T 2hqm_A 184 QPKKVVVVGAGYIGIELAGVFHG------LGSETHLVIRGETVLR----------KF-DECIQNTITDHYVKEGINVHKL 246 (479)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHH------TTCEEEEECSSSSSCT----------TS-CHHHHHHHHHHHHHHTCEEECS
T ss_pred cCCeEEEECCCHHHHHHHHHHHH------cCCceEEEEeCCcccc----------cc-CHHHHHHHHHHHHhCCeEEEeC
Confidence 34799999999999999999998 5779999999876310 11 1233344556667779999986
Q ss_pred -eEEEEcCCCCcCcCCCceeecccEEEcCCc-eEEEeeEEEEeCCCCCCC
Q 009310 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLESG-LIVEYDWLVLSLGAEPKL 205 (538)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~yD~lVlAtG~~~~~ 205 (538)
+|+.++.+... . ...+.+++| ..+.+|.||+|+|..|+.
T Consensus 247 ~~v~~i~~~~~~----~-----~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 247 SKIVKVEKNVET----D-----KLKIHMNDSKSIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp CCEEEEEECC-C----C-----CEEEEETTSCEEEEESEEEECSCEEECC
T ss_pred CEEEEEEEcCCC----c-----EEEEEECCCcEEEEcCEEEECCCCCCcc
Confidence 78888653210 0 014667788 789999999999998875
No 182
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.19 E-value=1.1e-06 Score=90.49 Aligned_cols=104 Identities=17% Similarity=0.113 Sum_probs=73.2
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCC--C---------CChhhHHHHHHHHHhCCCEEEcCceeeE
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICP--T---------GTPGNREAALKVLSARKVQLVLGYFVRC 313 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~--~---------~~~~~~~~~~~~l~~~gV~v~~~~~V~~ 313 (538)
++|+|||||+.|+++|..|++.......|+++++.+.+.. . ...++...+.+.+++.||+++.+ .|++
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~ 80 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEG-TVEK 80 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEEC-EEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEe-eEEE
Confidence 4899999999999999999882212223999998775421 1 12233445667788899999988 8988
Q ss_pred EeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCC
Q 009310 314 IRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLP 376 (538)
Q Consensus 314 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~ 376 (538)
++.+. ..|++.. ......++++|.||+|+|.+|+.+
T Consensus 81 i~~~~-----------------------~~V~~~~----g~~~~~~~~~d~lViAtG~~~~~~ 116 (409)
T 3h8l_A 81 IDAKS-----------------------SMVYYTK----PDGSMAEEEYDYVIVGIGAHLATE 116 (409)
T ss_dssp EETTT-----------------------TEEEEEC----TTSCEEEEECSEEEECCCCEECGG
T ss_pred EeCCC-----------------------CEEEEcc----CCcccceeeCCEEEECCCCCcCcc
Confidence 88754 4455541 111224689999999999988754
No 183
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.19 E-value=1.3e-06 Score=91.27 Aligned_cols=35 Identities=37% Similarity=0.618 Sum_probs=32.1
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
.+||+|||||+||+++|..|++ .|++|+|||+.+.
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~------~G~~V~vlE~~~~ 40 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSR------RGLKILLVDSKPW 40 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSS------SSCCEEEECSSCG
T ss_pred cCCEEEECcCHHHHHHHHHHHH------CCCCEEEEECCCC
Confidence 4799999999999999999998 6889999999764
No 184
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.18 E-value=3.9e-06 Score=88.73 Aligned_cols=37 Identities=22% Similarity=0.375 Sum_probs=32.9
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 77 ~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
++.++|+||||||+||++|..|++ .|++|+|||+.+.
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~------~G~~v~vlE~~~~ 46 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRL------GGVDVMVLEQLPQ 46 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESCSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHH------CCCCEEEEECCCC
Confidence 455899999999999999999999 7889999999764
No 185
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.18 E-value=2.8e-06 Score=89.20 Aligned_cols=100 Identities=19% Similarity=0.279 Sum_probs=74.9
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCC-CCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDK-KPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~-g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (538)
.++|+|||||+.|+.+|..|++ . |.+|+++++.+.+.- .. ...++...+.+.+++.+++++.+
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~------~~g~~Vtlv~~~~~~l~---------~~-~~~~~~~~l~~~l~~~GV~i~~~ 222 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLAD------MWGIDTTVVELADQIMP---------GF-TSKSLSQMLRHDLEKNDVVVHTG 222 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH------HHCCEEEEECSSSSSST---------TT-SCHHHHHHHHHHHHHTTCEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHH------hcCCcEEEEEccCcccc---------cc-cCHHHHHHHHHHHHhcCCEEEeC
Confidence 5799999999999999999998 4 679999999875311 01 12334445666777889999986
Q ss_pred -eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCC
Q 009310 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (538)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~ 205 (538)
.|+.++.+... ..+.+++|+.+.+|.||+|+|..|+.
T Consensus 223 ~~v~~i~~~~~~-----------v~v~~~~g~~i~aD~Vv~a~G~~p~~ 260 (472)
T 3iwa_A 223 EKVVRLEGENGK-----------VARVITDKRTLDADLVILAAGVSPNT 260 (472)
T ss_dssp CCEEEEEESSSB-----------EEEEEESSCEEECSEEEECSCEEECC
T ss_pred CEEEEEEccCCe-----------EEEEEeCCCEEEcCEEEECCCCCcCH
Confidence 88888753221 13566778899999999999988754
No 186
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.17 E-value=1.9e-06 Score=92.96 Aligned_cols=43 Identities=33% Similarity=0.525 Sum_probs=33.3
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCc
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~ 120 (538)
+.+||||||||+||+++|..|++......+|++|+|||+.+..
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~ 76 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHI 76 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSST
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCC
Confidence 4589999999999999999999830000027899999998653
No 187
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.17 E-value=4e-06 Score=85.86 Aligned_cols=35 Identities=23% Similarity=0.377 Sum_probs=31.7
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCc
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~ 120 (538)
.+|+||||||+||++|..|++ .|++|+|||+.+..
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~------~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRK------HGIKVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHh------CCCCEEEEecCCCC
Confidence 489999999999999999999 78999999997643
No 188
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.15 E-value=6.7e-06 Score=80.12 Aligned_cols=100 Identities=15% Similarity=0.211 Sum_probs=72.8
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCcc---------CCCC----ChhhHHHHHHHHHhC-CCEEEcCce
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTI---------CPTG----TPGNREAALKVLSAR-KVQLVLGYF 310 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~---------l~~~----~~~~~~~~~~~l~~~-gV~v~~~~~ 310 (538)
.+|+|||+|+.|+.+|..|++.+.+ |+++++.... .+.. ...+...+.+.+++. +++++.+ .
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~ 78 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKN---ILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEG-R 78 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEES-C
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCC---EEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEe-E
Confidence 3899999999999999999887754 9999974321 1111 134556667777776 7888765 8
Q ss_pred eeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCC
Q 009310 311 VRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPH 377 (538)
Q Consensus 311 V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~ 377 (538)
|+.++.++ +...+.+. +++++.+|.||+|+|.+|..+.
T Consensus 79 v~~i~~~~-----------------------~~~~v~~~------~g~~~~~d~vviAtG~~~~~~~ 116 (297)
T 3fbs_A 79 VTDAKGSF-----------------------GEFIVEID------GGRRETAGRLILAMGVTDELPE 116 (297)
T ss_dssp EEEEEEET-----------------------TEEEEEET------TSCEEEEEEEEECCCCEEECCC
T ss_pred EEEEEEcC-----------------------CeEEEEEC------CCCEEEcCEEEECCCCCCCCCC
Confidence 88887754 34455432 6678999999999999887543
No 189
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.15 E-value=6e-06 Score=86.09 Aligned_cols=98 Identities=16% Similarity=0.273 Sum_probs=71.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe-
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (538)
.++|+|||||+.|+.+|..|++ .|.+|+++++.+.+. ......++...+.+.+++. ++++.+
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~~l----------~~~~~~~~~~~l~~~l~~~-v~i~~~~ 210 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAA------QGKNVTMIVRGERVL----------RRSFDKEVTDILEEKLKKH-VNLRLQE 210 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSSSTT----------TTTSCHHHHHHHHHHHTTT-SEEEESC
T ss_pred CCeEEEECCCHHHHHHHHHHHh------CCCeEEEEEcCCccc----------hhhcCHHHHHHHHHHHHhC-cEEEeCC
Confidence 4699999999999999999998 577999999987631 1111233344556667677 999875
Q ss_pred eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCC
Q 009310 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (538)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~ 205 (538)
.+..++.+.+. ..+ ..++.++.+|.||+|+|..|+.
T Consensus 211 ~v~~i~~~~~v-----------~~v-~~~g~~i~~D~Vv~a~G~~p~~ 246 (449)
T 3kd9_A 211 ITMKIEGEERV-----------EKV-VTDAGEYKAELVILATGIKPNI 246 (449)
T ss_dssp CEEEEECSSSC-----------CEE-EETTEEEECSEEEECSCEEECC
T ss_pred eEEEEeccCcE-----------EEE-EeCCCEEECCEEEEeeCCccCH
Confidence 78888654432 123 3355689999999999988754
No 190
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.15 E-value=9.4e-06 Score=79.86 Aligned_cols=98 Identities=12% Similarity=0.138 Sum_probs=72.5
Q ss_pred eEEEECCChhHHHHHHHHHHHHH-hcCcEEEEecCCc-----------cCCCCC-----hhhHHHHHHHHHhCCCEEEcC
Q 009310 246 RVAVVGCGYSGVELAATVSERLE-EKGIVQAINVETT-----------ICPTGT-----PGNREAALKVLSARKVQLVLG 308 (538)
Q Consensus 246 ~VvVVGgG~~g~E~A~~l~~~~~-~~~~Vtlv~~~~~-----------~l~~~~-----~~~~~~~~~~l~~~gV~v~~~ 308 (538)
+|+|||+|+.|+.+|..|++.+. + |+++++... ..+.++ ..+.+.+.+.+++.|++++.
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~~---v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~- 78 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRGGVKN---AVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEM- 78 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSS---EEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEEC-
T ss_pred eEEEECccHHHHHHHHHHHHCCCCc---EEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEE-
Confidence 79999999999999999988765 4 999998421 012221 34556677778889999998
Q ss_pred ceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCC
Q 009310 309 YFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLP 376 (538)
Q Consensus 309 ~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~ 376 (538)
..|..++.++ +.+.+.+. +++++.+|.||+|+|..|..+
T Consensus 79 ~~v~~i~~~~-----------------------~~~~v~~~------~g~~~~~~~vv~AtG~~~~~~ 117 (311)
T 2q0l_A 79 TAVQRVSKKD-----------------------SHFVILAE------DGKTFEAKSVIIATGGSPKRT 117 (311)
T ss_dssp SCEEEEEEET-----------------------TEEEEEET------TSCEEEEEEEEECCCEEECCC
T ss_pred EEEEEEEEcC-----------------------CEEEEEEc------CCCEEECCEEEECCCCCCCCC
Confidence 6888887643 33444432 567899999999999887644
No 191
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.14 E-value=1.8e-06 Score=88.97 Aligned_cols=35 Identities=37% Similarity=0.479 Sum_probs=32.1
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCE-EEEEcCCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQ-VLLVDQSER 119 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~-V~lie~~~~ 119 (538)
.++|+|||||++|+++|..|++ .|++ |+|||+.+.
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~------~G~~~v~v~E~~~~ 39 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQ------AGIGKVTLLESSSE 39 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCSEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh------CCCCeEEEEECCCC
Confidence 4799999999999999999999 6889 999999764
No 192
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.14 E-value=2.2e-06 Score=90.26 Aligned_cols=100 Identities=14% Similarity=0.192 Sum_probs=73.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe-
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (538)
.++|+|||||+.|+.+|..|++ .|.+|+|+|+.+.+. . . ...++...+.+.+++.+++++.+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~------~G~~Vtlv~~~~~~l---------~-~-~~~~~~~~l~~~l~~~gV~i~~~~ 247 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYST------LGSRLDVVEMMDGLM---------Q-G-ADRDLVKVWQKQNEYRFDNIMVNT 247 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHH------HTCEEEEECSSSSSS---------T-T-SCHHHHHHHHHHHGGGEEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHH------cCCeEEEEEECCccc---------c-c-cCHHHHHHHHHHHHhcCCEEEECC
Confidence 5799999999999999999998 567999999987631 1 1 11233445566777889999986
Q ss_pred eEEEEcCCCCcCcCCCceeecccEEEcCC----ceEEEeeEEEEeCCCCCCCC
Q 009310 158 RVKLLCPSDHLGVNGPMACTHGGTVLLES----GLIVEYDWLVLSLGAEPKLD 206 (538)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~----g~~~~yD~lVlAtG~~~~~p 206 (538)
++++++.+... ..+.+++ ++.+.+|.||+|+|..|+..
T Consensus 248 ~v~~i~~~~~~-----------~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~ 289 (482)
T 1ojt_A 248 KTVAVEPKEDG-----------VYVTFEGANAPKEPQRYDAVLVAAGRAPNGK 289 (482)
T ss_dssp EEEEEEEETTE-----------EEEEEESSSCCSSCEEESCEEECCCEEECGG
T ss_pred EEEEEEEcCCe-----------EEEEEeccCCCceEEEcCEEEECcCCCcCCC
Confidence 88888644321 1344444 66789999999999988653
No 193
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.13 E-value=1.5e-05 Score=80.26 Aligned_cols=98 Identities=13% Similarity=0.138 Sum_probs=73.9
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccC-------C--------CCC----hhhHHHHHHHHHhCCCEE
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTIC-------P--------TGT----PGNREAALKVLSARKVQL 305 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l-------~--------~~~----~~~~~~~~~~l~~~gV~v 305 (538)
.+|+|||+|+.|+.+|..|++.+.+ |+++++.+.+. + .++ ..+.+.+.+.+++.|+++
T Consensus 15 ~dvvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 91 (360)
T 3ab1_A 15 RDLTIIGGGPTGIFAAFQCGMNNIS---CRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDV 91 (360)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCC---EEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEE
Confidence 4899999999999999999876554 99999875431 1 111 345566777788889999
Q ss_pred EcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCC
Q 009310 306 VLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKP 373 (538)
Q Consensus 306 ~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p 373 (538)
+.++.|+.++.+++ +.+.+.+. +++.+.+|.||+|+|..+
T Consensus 92 ~~~~~v~~i~~~~~----------------------~~~~v~~~------~g~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 92 VLNETVTKYTKLDD----------------------GTFETRTN------TGNVYRSRAVLIAAGLGA 131 (360)
T ss_dssp ECSCCEEEEEECTT----------------------SCEEEEET------TSCEEEEEEEEECCTTCS
T ss_pred EcCCEEEEEEECCC----------------------ceEEEEEC------CCcEEEeeEEEEccCCCc
Confidence 99999999987431 24455432 567899999999999943
No 194
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.13 E-value=5.4e-06 Score=89.10 Aligned_cols=110 Identities=18% Similarity=0.262 Sum_probs=73.5
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe-
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (538)
.++|+|||||+.|+.+|..|++ .|.+|+++++.+.+. . . ...++...+.+.+++.+++++.+
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~------~g~~Vtlv~~~~~~l---------~-~-~~~~~~~~l~~~l~~~GV~i~~~~ 213 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHH------LGIKTTLLELADQVM---------T-P-VDREMAGFAHQAIRDQGVDLRLGT 213 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSSSSC---------T-T-SCHHHHHHHHHHHHHTTCEEEETC
T ss_pred CCEEEEECCCHHHHHHHHHHHh------cCCcEEEEEcCCccc---------h-h-cCHHHHHHHHHHHHHCCCEEEeCC
Confidence 4699999999999999999998 577999999987521 1 1 11233344566677889999985
Q ss_pred eEEEEcCCCCcCc-----C-CCce--eecccEEEcCCceEEEeeEEEEeCCCCCCC
Q 009310 158 RVKLLCPSDHLGV-----N-GPMA--CTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (538)
Q Consensus 158 ~v~~i~~~~~~~~-----~-~~~~--~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~ 205 (538)
.++++........ . .... ......+.+.+++.+.+|.||+|+|..|+.
T Consensus 214 ~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 269 (565)
T 3ntd_A 214 ALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPET 269 (565)
T ss_dssp CEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred eEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccch
Confidence 7888764200000 0 0000 000114556778899999999999988764
No 195
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.12 E-value=5.2e-06 Score=89.73 Aligned_cols=97 Identities=25% Similarity=0.432 Sum_probs=74.9
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe-
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (538)
.++|+|||||+.|+.+|..|++ .|.+|+++++.+.+. . . ...++...+.+.+++.+++++.+
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~------~g~~Vtlv~~~~~~l---------~-~-~~~~~~~~l~~~l~~~GV~i~~~~ 249 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRE------RGIEVTLVEMANQVM---------P-P-IDYEMAAYVHEHMKNHDVELVFED 249 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSC---------T-T-SCHHHHHHHHHHHHHTTCEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHh------CCCeEEEEecCCccc---------c-c-CCHHHHHHHHHHHHHcCCEEEECC
Confidence 5799999999999999999998 577999999987521 1 1 11233445666777889999985
Q ss_pred eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCC
Q 009310 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (538)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~ 205 (538)
.|+.++.... .+.+.++..+.+|.||+|+|..|+.
T Consensus 250 ~v~~i~~~~~-------------~v~~~~g~~i~~D~Vi~a~G~~p~~ 284 (588)
T 3ics_A 250 GVDALEENGA-------------VVRLKSGSVIQTDMLILAIGVQPES 284 (588)
T ss_dssp CEEEEEGGGT-------------EEEETTSCEEECSEEEECSCEEECC
T ss_pred eEEEEecCCC-------------EEEECCCCEEEcCEEEEccCCCCCh
Confidence 8888865432 4677788899999999999988764
No 196
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.12 E-value=3.8e-06 Score=88.42 Aligned_cols=100 Identities=18% Similarity=0.254 Sum_probs=72.8
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (538)
..++|+|||||+.|+.+|..|++ .|.+|+++++.+.+.. . ...++...+.+.+++.+++++.+
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~------~g~~Vtlv~~~~~~l~----------~-~~~~~~~~l~~~l~~~Gv~i~~~ 247 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVE------LGKKVRMIERNDHIGT----------I-YDGDMAEYIYKEADKHHIEILTN 247 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHH------TTCEEEEECCGGGTTS----------S-SCHHHHHHHHHHHHHTTCEEECS
T ss_pred CCCeEEEECCCHHHHHHHHHHHh------cCCeEEEEEeCCchhh----------c-CCHHHHHHHHHHHHHcCcEEEcC
Confidence 45899999999999999999998 5779999999865211 1 11233445566677889999875
Q ss_pred -eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCC
Q 009310 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLD 206 (538)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p 206 (538)
.|+.++.+.+. ..+.+++ ..+.+|.||+|+|..|+.+
T Consensus 248 ~~v~~i~~~~~v-----------~~v~~~~-~~i~~D~vi~a~G~~p~~~ 285 (480)
T 3cgb_A 248 ENVKAFKGNERV-----------EAVETDK-GTYKADLVLVSVGVKPNTD 285 (480)
T ss_dssp CCEEEEEESSBE-----------EEEEETT-EEEECSEEEECSCEEESCG
T ss_pred CEEEEEEcCCcE-----------EEEEECC-CEEEcCEEEECcCCCcChH
Confidence 78888654321 1244444 4899999999999887653
No 197
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.11 E-value=2.1e-06 Score=88.27 Aligned_cols=36 Identities=28% Similarity=0.379 Sum_probs=31.3
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
.+||+|||||++|+++|+.|++. .+|++|+|||++.
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~----~pG~~V~vlE~~~ 71 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQL----APGRSLLLVEEGG 71 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----CTTSCEEEECSSC
T ss_pred cCCEEEECCcHHHHHHHHHHHhc----CCCCeEEEEeCCC
Confidence 37999999999999999999983 1288999999975
No 198
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.09 E-value=6.4e-06 Score=86.26 Aligned_cols=101 Identities=17% Similarity=0.262 Sum_probs=73.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe-
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (538)
.++|+|||||+.|+.+|..|++ .|.+|+|+++.+.+. . . ...++...+.+.+++.+++++.+
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~~l---------~-~-~~~~~~~~l~~~l~~~gv~i~~~~ 233 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKN------YGVDVTIVEFLPRAL---------P-N-EDADVSKEIEKQFKKLGVTILTAT 233 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSS---------T-T-SCHHHHHHHHHHHHHHTCEEECSC
T ss_pred CCeEEEECCcHHHHHHHHHHHH------cCCeEEEEEcCCccc---------c-c-cCHHHHHHHHHHHHHcCCEEEeCc
Confidence 5799999999999999999998 577999999987631 1 1 11233344566667779999985
Q ss_pred eEEEEcCCCCcCcCCCceeecccEEEcC-Cc--eEEEeeEEEEeCCCCCCCCC
Q 009310 158 RVKLLCPSDHLGVNGPMACTHGGTVLLE-SG--LIVEYDWLVLSLGAEPKLDV 207 (538)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~-~g--~~~~yD~lVlAtG~~~~~p~ 207 (538)
.++.++.+... ..+.+. +| ..+.+|.||+|+|..|+...
T Consensus 234 ~v~~i~~~~~~-----------~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~ 275 (464)
T 2a8x_A 234 KVESIADGGSQ-----------VTVTVTKDGVAQELKAEKVLQAIGFAPNVEG 275 (464)
T ss_dssp EEEEEEECSSC-----------EEEEEESSSCEEEEEESEEEECSCEEECCSS
T ss_pred EEEEEEEcCCe-----------EEEEEEcCCceEEEEcCEEEECCCCCccCCC
Confidence 88888654321 023432 44 67999999999999887543
No 199
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.09 E-value=7.6e-06 Score=85.79 Aligned_cols=101 Identities=19% Similarity=0.242 Sum_probs=73.0
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHh-ccCCcEEEE
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLL-ANTGVQFFK 156 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~-~~~~v~~~~ 156 (538)
..++|+|||||+.|+.+|..|++ .|.+|+++++.+.+. . . ...++...+.+.+ ++.+++++.
T Consensus 173 ~~~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~~l---------~-~-~d~~~~~~l~~~l~~~~gv~i~~ 235 (468)
T 2qae_A 173 VPKTMVVIGGGVIGLELGSVWAR------LGAEVTVVEFAPRCA---------P-T-LDEDVTNALVGALAKNEKMKFMT 235 (468)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSS---------T-T-SCHHHHHHHHHHHHHHTCCEEEC
T ss_pred CCceEEEECCCHHHHHHHHHHHH------hCCEEEEEecCCccc---------c-c-CCHHHHHHHHHHHhhcCCcEEEe
Confidence 35799999999999999999998 577999999987631 1 1 1123344566667 788999998
Q ss_pred e-eEEEEcCCCCcCcCCCceeecccEEEcC--Cc--eEEEeeEEEEeCCCCCCCC
Q 009310 157 D-RVKLLCPSDHLGVNGPMACTHGGTVLLE--SG--LIVEYDWLVLSLGAEPKLD 206 (538)
Q Consensus 157 ~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~--~g--~~~~yD~lVlAtG~~~~~p 206 (538)
+ +|+.++.+... ..+.++ +| ..+.+|.||+|+|..|+..
T Consensus 236 ~~~v~~i~~~~~~-----------~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~ 279 (468)
T 2qae_A 236 STKVVGGTNNGDS-----------VSLEVEGKNGKRETVTCEALLVSVGRRPFTG 279 (468)
T ss_dssp SCEEEEEEECSSS-----------EEEEEECC---EEEEEESEEEECSCEEECCT
T ss_pred CCEEEEEEEcCCe-----------EEEEEEcCCCceEEEECCEEEECCCcccCCC
Confidence 5 88888654321 123433 45 5799999999999988654
No 200
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.09 E-value=6.3e-06 Score=87.71 Aligned_cols=103 Identities=14% Similarity=0.232 Sum_probs=75.1
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe-e
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD-R 158 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~-~ 158 (538)
++++|||||+.|+.+|..|++ .|.+|+++++.+.+. . . ...++...+.+.+++.+++++.+ .
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~------~G~~Vtlv~~~~~~l---------~-~-~~~~~~~~l~~~l~~~GV~i~~~~~ 277 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNA------TGRRTVMLVRTEPLK---------L-I-KDNETRAYVLDRMKEQGMEIISGSN 277 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSCTTT---------T-C-CSHHHHHHHHHHHHHTTCEEESSCE
T ss_pred CeEEEECCCHHHHHHHHHHHH------cCCeEEEEEecCccc---------c-c-ccHHHHHHHHHHHHhCCcEEEECCE
Confidence 899999999999999999998 577999999987531 1 1 12333445666777889999975 8
Q ss_pred EEEEcCCCCcCcCCCceeecccEEEcCCce-EEEeeEEEEeCCCCCCCC
Q 009310 159 VKLLCPSDHLGVNGPMACTHGGTVLLESGL-IVEYDWLVLSLGAEPKLD 206 (538)
Q Consensus 159 v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~-~~~yD~lVlAtG~~~~~p 206 (538)
|+++...... . +.+..+.+++|+ .+.+|.||+|+|.+|+..
T Consensus 278 V~~i~~~~~~-----~--v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~ 319 (523)
T 1mo9_A 278 VTRIEEDANG-----R--VQAVVAMTPNGEMRIETDFVFLGLGEQPRSA 319 (523)
T ss_dssp EEEEEECTTS-----B--EEEEEEEETTEEEEEECSCEEECCCCEECCH
T ss_pred EEEEEEcCCC-----c--eEEEEEEECCCcEEEEcCEEEECcCCccCCc
Confidence 8888653210 0 000146677787 899999999999987653
No 201
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.09 E-value=9.4e-06 Score=83.64 Aligned_cols=97 Identities=16% Similarity=0.188 Sum_probs=73.8
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCC---------------------------C-----------
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT---------------------------G----------- 286 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~---------------------------~----------- 286 (538)
.+|+|||||++|+.+|..+++.+.+ |+++++.+.+... +
T Consensus 28 ~dViIIGgG~AGl~aA~~La~~G~~---V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (417)
T 3v76_A 28 QDVVIIGAGAAGMMCAIEAGKRGRR---VLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQ 104 (417)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCc---EEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHH
Confidence 4899999999999999999987665 9999987643210 0
Q ss_pred --------------------------ChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccC
Q 009310 287 --------------------------TPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKN 340 (538)
Q Consensus 287 --------------------------~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (538)
...+.+.+.+.+++.||+++++++|+++..++
T Consensus 105 ~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~---------------------- 162 (417)
T 3v76_A 105 DFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTA---------------------- 162 (417)
T ss_dssp HHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEET----------------------
T ss_pred HHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC----------------------
Confidence 01344556677888899999999999998654
Q ss_pred CCceEEeecccccCCcceEEeccEEEEecCCCCC
Q 009310 341 SDKYILELQPAIKGLESQIFEADLVLWTVGSKPL 374 (538)
Q Consensus 341 ~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~ 374 (538)
+++.+... ++ ++.+|.||+|+|..+.
T Consensus 163 -~~~~V~~~------~g-~i~ad~VIlAtG~~S~ 188 (417)
T 3v76_A 163 -SGFRVTTS------AG-TVDAASLVVASGGKSI 188 (417)
T ss_dssp -TEEEEEET------TE-EEEESEEEECCCCSSC
T ss_pred -CEEEEEEC------Cc-EEEeeEEEECCCCccC
Confidence 45556532 44 8999999999998763
No 202
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.07 E-value=5.8e-06 Score=87.29 Aligned_cols=104 Identities=23% Similarity=0.264 Sum_probs=74.5
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe-
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (538)
.++|+|||||+.|+.+|..|++.+. ..|.+|+++++.+... +..-+..+...+.+.+++.+|+++.+
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~--~~g~~V~~v~~~~~~~----------~~~l~~~~~~~~~~~l~~~GV~v~~~~ 247 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKAR--ALGTEVIQLFPEKGNM----------GKILPEYLSNWTMEKVRREGVKVMPNA 247 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHH--HHTCEEEEECSSSSTT----------TTTSCHHHHHHHHHHHHTTTCEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhh--hcCCEEEEEecCcccc----------cccCCHHHHHHHHHHHHhcCCEEEeCC
Confidence 5799999999999999999976431 1367999999876421 11111233344566777889999986
Q ss_pred eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCC
Q 009310 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKL 205 (538)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~ 205 (538)
.|+.++.+... ..+.+.+|..+.+|.||+|+|..|+.
T Consensus 248 ~V~~i~~~~~~-----------~~v~l~dG~~i~aD~Vv~a~G~~pn~ 284 (493)
T 1m6i_A 248 IVQSVGVSSGK-----------LLIKLKDGRKVETDHIVAAVGLEPNV 284 (493)
T ss_dssp CEEEEEEETTE-----------EEEEETTSCEEEESEEEECCCEEECC
T ss_pred EEEEEEecCCe-----------EEEEECCCCEEECCEEEECCCCCccH
Confidence 78888643221 14667788899999999999998764
No 203
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.07 E-value=1.2e-05 Score=84.33 Aligned_cols=101 Identities=18% Similarity=0.279 Sum_probs=74.0
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (538)
..++|+|||||+.|+.+|..|++ .|.+|+++++.+.+. . . ...++...+.+.+++.+++++.+
T Consensus 179 ~~~~v~ViGgG~~g~e~A~~l~~------~g~~Vtlv~~~~~~l---------~-~-~~~~~~~~l~~~l~~~Gv~v~~~ 241 (476)
T 3lad_A 179 VPGKLGVIGAGVIGLELGSVWAR------LGAEVTVLEAMDKFL---------P-A-VDEQVAKEAQKILTKQGLKILLG 241 (476)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSSSSS---------T-T-SCHHHHHHHHHHHHHTTEEEEET
T ss_pred CCCeEEEECCCHHHHHHHHHHHH------cCCcEEEEecCCCcC---------c-c-cCHHHHHHHHHHHHhCCCEEEEC
Confidence 35799999999999999999998 577999999987631 1 1 11334445666777889999985
Q ss_pred -eEEEEcCCCCcCcCCCceeecccEEEcCC--c-eEEEeeEEEEeCCCCCCCC
Q 009310 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLES--G-LIVEYDWLVLSLGAEPKLD 206 (538)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~~~~--g-~~~~yD~lVlAtG~~~~~p 206 (538)
+++.+..+... ..+.+.+ + ..+.+|.||+|+|..|+..
T Consensus 242 ~~v~~i~~~~~~-----------~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~ 283 (476)
T 3lad_A 242 ARVTGTEVKNKQ-----------VTVKFVDAEGEKSQAFDKLIVAVGRRPVTT 283 (476)
T ss_dssp CEEEEEEECSSC-----------EEEEEESSSEEEEEEESEEEECSCEEECCT
T ss_pred CEEEEEEEcCCE-----------EEEEEEeCCCcEEEECCEEEEeeCCcccCC
Confidence 88888654321 1344433 3 5799999999999887654
No 204
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.07 E-value=1.9e-05 Score=78.23 Aligned_cols=99 Identities=11% Similarity=0.051 Sum_probs=71.8
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCc-----------cCCCCC-----hhhHHHHHHHHHhCCCEEEcC
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT-----------ICPTGT-----PGNREAALKVLSARKVQLVLG 308 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~-----------~l~~~~-----~~~~~~~~~~l~~~gV~v~~~ 308 (538)
.+|+|||+|+.|+.+|..|++.+.+ |+++++... -.+.++ ..+.+.+.+.+++.|++++.
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~- 84 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGRAQLS---TLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEM- 84 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEE-
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCc---EEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEe-
Confidence 4799999999999999999887654 999998621 012221 24556667778889999987
Q ss_pred ceeeEEecc--ccccccccCCCCCcccccccccCCCc-eEEeecccccCCcceEEeccEEEEecCCCCCCC
Q 009310 309 YFVRCIRRV--GEFEASVKQPESGAIPNIAADKNSDK-YILELQPAIKGLESQIFEADLVLWTVGSKPLLP 376 (538)
Q Consensus 309 ~~V~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~ 376 (538)
..+..++.+ + +. +.+.+. +++.+.+|.||+|+|..|..+
T Consensus 85 ~~v~~i~~~~~~-----------------------~~~~~v~~~------~g~~~~~~~vv~AtG~~~~~~ 126 (325)
T 2q7v_A 85 DEVQGVQHDATS-----------------------HPYPFTVRG------YNGEYRAKAVILATGADPRKL 126 (325)
T ss_dssp CCEEEEEECTTS-----------------------SSCCEEEEE------SSCEEEEEEEEECCCEEECCC
T ss_pred eeEEEEEeccCC-----------------------CceEEEEEC------CCCEEEeCEEEECcCCCcCCC
Confidence 578888764 2 21 333322 567899999999999987644
No 205
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.06 E-value=6.9e-06 Score=86.86 Aligned_cols=101 Identities=18% Similarity=0.257 Sum_probs=76.1
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (538)
..++++|||||+.|+.+|..|++ .|.+|+++++.+.+. . . ...++...+.+.+++.+++++.+
T Consensus 181 ~~~~vvViGgG~ig~E~A~~l~~------~g~~Vtlv~~~~~~l---------~-~-~d~~~~~~l~~~l~~~GV~i~~~ 243 (499)
T 1xdi_A 181 LPDHLIVVGSGVTGAEFVDAYTE------LGVPVTVVASQDHVL---------P-Y-EDADAALVLEESFAERGVRLFKN 243 (499)
T ss_dssp CCSSEEEESCSHHHHHHHHHHHH------TTCCEEEECSSSSSS---------C-C-SSHHHHHHHHHHHHHTTCEEETT
T ss_pred cCCeEEEECCCHHHHHHHHHHHH------cCCeEEEEEcCCccc---------c-c-cCHHHHHHHHHHHHHCCCEEEeC
Confidence 34799999999999999999998 577999999987631 1 1 11234445666777889999975
Q ss_pred -eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCC
Q 009310 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLD 206 (538)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p 206 (538)
.|+.+..+... ..+.+.++..+.+|.||+|+|.+|+..
T Consensus 244 ~~V~~i~~~~~~-----------v~v~~~~g~~i~aD~Vv~a~G~~p~~~ 282 (499)
T 1xdi_A 244 ARAASVTRTGAG-----------VLVTMTDGRTVEGSHALMTIGSVPNTS 282 (499)
T ss_dssp CCEEEEEECSSS-----------EEEEETTSCEEEESEEEECCCEEECCS
T ss_pred CEEEEEEEeCCE-----------EEEEECCCcEEEcCEEEECCCCCcCCC
Confidence 88888654321 145566778899999999999988764
No 206
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.06 E-value=6.8e-06 Score=81.66 Aligned_cols=38 Identities=26% Similarity=0.374 Sum_probs=32.8
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCc
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~ 120 (538)
.+||+|||||++|+++|+.|++. .+|++|+|||+++..
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~----~~G~~V~LiEk~~~~ 116 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTL----RPDLRITIVEAGVAP 116 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHH----CTTSCEEEEESSSSC
T ss_pred cCCEEEECccHHHHHHHHHHHhc----CCCCEEEEEeCCCcc
Confidence 47999999999999999999983 148899999998654
No 207
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.05 E-value=2e-06 Score=89.11 Aligned_cols=99 Identities=14% Similarity=0.140 Sum_probs=70.3
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCC-----------ChhhHHHHHHHHHhCCCEEEcCceeeE
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTG-----------TPGNREAALKVLSARKVQLVLGYFVRC 313 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~-----------~~~~~~~~~~~l~~~gV~v~~~~~V~~ 313 (538)
++|+|||||+.|+.+|..|++... ...|+++++.+.+.... ...+...+.+.+++.||+++.+ .++.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~-g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~ 80 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMP-DLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAES 80 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCT-TCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCC-CCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEE-EEEE
Confidence 589999999999999999988322 22399999987653210 1111122234567789999975 8888
Q ss_pred EeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCC
Q 009310 314 IRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLP 376 (538)
Q Consensus 314 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~ 376 (538)
++.+. ..+.+. +++++.+|.+|+|+|.+|+.+
T Consensus 81 id~~~-----------------------~~v~~~--------~g~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 81 IDPDA-----------------------NTVTTQ--------SGKKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp EETTT-----------------------TEEEET--------TCCEEECSEEEECCCCEEECC
T ss_pred EECCC-----------------------CEEEEC--------CCcEEECCEEEEcCCcccccC
Confidence 88743 334443 667899999999999998754
No 208
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.05 E-value=1.1e-05 Score=85.17 Aligned_cols=101 Identities=16% Similarity=0.168 Sum_probs=71.8
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (538)
..++|+|||||+.|+.+|..|++ .|.+|+++++.+.+. .. ...++...+.+.+++. ++++.+
T Consensus 173 ~~k~vvViGgG~ig~E~A~~l~~------~g~~Vtlv~~~~~~l----------~~-~d~~~~~~l~~~l~~~-V~i~~~ 234 (492)
T 3ic9_A 173 LPKSVAVFGPGVIGLELGQALSR------LGVIVKVFGRSGSVA----------NL-QDEEMKRYAEKTFNEE-FYFDAK 234 (492)
T ss_dssp CCSEEEEESSCHHHHHHHHHHHH------TTCEEEEECCTTCCT----------TC-CCHHHHHHHHHHHHTT-SEEETT
T ss_pred cCCeEEEECCCHHHHHHHHHHHH------cCCeEEEEEECCccc----------cc-CCHHHHHHHHHHHhhC-cEEEEC
Confidence 35899999999999999999998 577999999988631 11 1123334455566555 888864
Q ss_pred -eEEEEcCCCCcCcCCCceeecccEEEcC--Cc--eEEEeeEEEEeCCCCCCCCC
Q 009310 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLE--SG--LIVEYDWLVLSLGAEPKLDV 207 (538)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~~~--~g--~~~~yD~lVlAtG~~~~~p~ 207 (538)
.++.+..+... ..+.+. +| ..+.+|.||+|+|..|+...
T Consensus 235 ~~v~~i~~~~~~-----------v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~ 278 (492)
T 3ic9_A 235 ARVISTIEKEDA-----------VEVIYFDKSGQKTTESFQYVLAATGRKANVDK 278 (492)
T ss_dssp CEEEEEEECSSS-----------EEEEEECTTCCEEEEEESEEEECSCCEESCSS
T ss_pred CEEEEEEEcCCE-----------EEEEEEeCCCceEEEECCEEEEeeCCccCCCC
Confidence 78887654321 124432 55 68999999999999887654
No 209
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.04 E-value=7.3e-06 Score=87.15 Aligned_cols=100 Identities=21% Similarity=0.188 Sum_probs=75.1
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (538)
.+++++|||||+.|++.|..++++ |.+|||++++.. +.+ ...++...+.+.+++.+++++.+
T Consensus 222 lP~~lvIIGgG~IGlE~A~~~~~l------G~~VTii~~~~~----------L~~--~D~ei~~~l~~~l~~~gi~~~~~ 283 (542)
T 4b1b_A 222 DPGKTLVVGASYVALECSGFLNSL------GYDVTVAVRSIV----------LRG--FDQQCAVKVKLYMEEQGVMFKNG 283 (542)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHH------TCCEEEEESSCS----------STT--SCHHHHHHHHHHHHHTTCEEEET
T ss_pred CCceEEEECCCHHHHHHHHHHHhc------CCeEEEeccccc----------ccc--cchhHHHHHHHHHHhhcceeecc
Confidence 458999999999999999999995 569999987543 111 12345556777788889999986
Q ss_pred -eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCC
Q 009310 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLD 206 (538)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p 206 (538)
.+..+...... ..+.+.++..+.+|.|++|+|-+|+..
T Consensus 284 ~~v~~~~~~~~~-----------~~v~~~~~~~~~~D~vLvAvGR~Pnt~ 322 (542)
T 4b1b_A 284 ILPKKLTKMDDK-----------ILVEFSDKTSELYDTVLYAIGRKGDID 322 (542)
T ss_dssp CCEEEEEEETTE-----------EEEEETTSCEEEESEEEECSCEEESCG
T ss_pred eEEEEEEecCCe-----------EEEEEcCCCeEEEEEEEEcccccCCcc
Confidence 67776543321 246677777899999999999887754
No 210
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.03 E-value=5.9e-06 Score=86.64 Aligned_cols=101 Identities=23% Similarity=0.302 Sum_probs=73.1
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (538)
..++|+|||||+.|+.+|..|++ .|.+|+++++.+.+. . . ...++...+.+.+++.+++++.+
T Consensus 176 ~~~~vvViGgG~~g~e~A~~l~~------~g~~Vtli~~~~~~l---------~-~-~~~~~~~~l~~~l~~~gv~i~~~ 238 (470)
T 1dxl_A 176 IPKKLVVIGAGYIGLEMGSVWGR------IGSEVTVVEFASEIV---------P-T-MDAEIRKQFQRSLEKQGMKFKLK 238 (470)
T ss_dssp CCSEEEESCCSHHHHHHHHHHHH------HTCEEEEECSSSSSS---------T-T-SCHHHHHHHHHHHHHSSCCEECS
T ss_pred cCCeEEEECCCHHHHHHHHHHHH------cCCcEEEEEcCCccc---------c-c-ccHHHHHHHHHHHHHcCCEEEeC
Confidence 35799999999999999999998 567999999987631 1 1 11233344566677889999985
Q ss_pred -eEEEEcCCCCcCcCCCceeecccEEEcC---Cc--eEEEeeEEEEeCCCCCCCC
Q 009310 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLE---SG--LIVEYDWLVLSLGAEPKLD 206 (538)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~~~---~g--~~~~yD~lVlAtG~~~~~p 206 (538)
+++.++.+... ..+.+. +| ..+.+|.||+|+|..|+..
T Consensus 239 ~~v~~i~~~~~~-----------~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~ 282 (470)
T 1dxl_A 239 TKVVGVDTSGDG-----------VKLTVEPSAGGEQTIIEADVVLVSAGRTPFTS 282 (470)
T ss_dssp EEEEEEECSSSS-----------EEEEEEESSSCCCEEEEESEEECCCCEEECCT
T ss_pred CEEEEEEEcCCe-----------EEEEEEecCCCcceEEECCEEEECCCCCcCCC
Confidence 88888754321 023332 33 6899999999999988654
No 211
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.03 E-value=2.8e-05 Score=78.42 Aligned_cols=98 Identities=18% Similarity=0.230 Sum_probs=70.5
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCC------------cc-CCC-------C------------------
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVET------------TI-CPT-------G------------------ 286 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~------------~~-l~~-------~------------------ 286 (538)
.+|+|||+|+.|+.+|..|++.+.+ .|+++++.+ .+ .+. +
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~g~~--~v~lie~~~~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 82 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDFGIT--DVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNE 82 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC--CEEEECSSSTTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCC
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCC--cEEEEecCCCCCccccCcccccccCcchhcccCCchhhhhccccccccccccc
Confidence 3799999999999999999887651 299999864 00 000 0
Q ss_pred ---C-hhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEec
Q 009310 287 ---T-PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEA 362 (538)
Q Consensus 287 ---~-~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~ 362 (538)
. ..+...+.+.+++.|++++.++.|.+++.++ +.+.+... ++ ++.+
T Consensus 83 ~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~-----------------------~~~~v~~~------~g-~~~~ 132 (369)
T 3d1c_A 83 EHISGETYAEYLQVVANHYELNIFENTVVTNISADD-----------------------AYYTIATT------TE-TYHA 132 (369)
T ss_dssp SSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECS-----------------------SSEEEEES------SC-CEEE
T ss_pred cCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECC-----------------------CeEEEEeC------CC-EEEe
Confidence 0 1234455667788999999999999998743 34555432 33 5899
Q ss_pred cEEEEecCCCCC
Q 009310 363 DLVLWTVGSKPL 374 (538)
Q Consensus 363 D~vI~a~G~~p~ 374 (538)
|.||+|+|..+.
T Consensus 133 d~vVlAtG~~~~ 144 (369)
T 3d1c_A 133 DYIFVATGDYNF 144 (369)
T ss_dssp EEEEECCCSTTS
T ss_pred CEEEECCCCCCc
Confidence 999999999765
No 212
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.03 E-value=1.3e-05 Score=78.88 Aligned_cols=102 Identities=13% Similarity=0.020 Sum_probs=72.7
Q ss_pred eEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCC--ccC--------CCC----ChhhHHHHHHHHHhCCCEEEcCcee
Q 009310 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVET--TIC--------PTG----TPGNREAALKVLSARKVQLVLGYFV 311 (538)
Q Consensus 246 ~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~--~~l--------~~~----~~~~~~~~~~~l~~~gV~v~~~~~V 311 (538)
+|+|||+|+.|+.+|..|++.+.+ |++++... ... ... .+.+...+.+.+++.|++++.++.|
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~---v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v 79 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSARKGIR---TGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSA 79 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCC---EEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCCE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCc---EEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCEE
Confidence 799999999999999999876554 88886531 000 000 1345667777888899999999999
Q ss_pred eEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCC
Q 009310 312 RCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLP 376 (538)
Q Consensus 312 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~ 376 (538)
..++.+.... +...+.+. +++.+.+|.+|+|+|.+|..+
T Consensus 80 ~~i~~~~~~~--------------------~~~~v~~~------~g~~~~~~~lv~AtG~~~~~~ 118 (310)
T 1fl2_A 80 SKLIPAAVEG--------------------GLHQIETA------SGAVLKARSIIVATGAKWRNM 118 (310)
T ss_dssp EEEECCSSTT--------------------CCEEEEET------TSCEEEEEEEEECCCEEECCC
T ss_pred EEEEecccCC--------------------ceEEEEEC------CCCEEEeCEEEECcCCCcCCC
Confidence 9997532100 23444432 567899999999999987643
No 213
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.03 E-value=1.4e-05 Score=83.30 Aligned_cols=106 Identities=15% Similarity=0.078 Sum_probs=72.5
Q ss_pred CCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCC-------------------------------------
Q 009310 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTG------------------------------------- 286 (538)
Q Consensus 244 ~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~------------------------------------- 286 (538)
..+|+|||+|++|+.+|..|++.+.. ..|+++++.+.+....
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~-~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAF-DQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCC-SEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCC-CCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 46999999999999999999887651 0299999864331000
Q ss_pred -----------------------------ChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCccccccc
Q 009310 287 -----------------------------TPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAA 337 (538)
Q Consensus 287 -----------------------------~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~ 337 (538)
...+.+++.+..++.++.+++++.|+.++.++
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~------------------- 145 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKD------------------- 145 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEET-------------------
T ss_pred hhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCC-------------------
Confidence 01234455566666788899999999997644
Q ss_pred ccCCCceEEeecccccCCcce---EEeccEEEEecCC--CCCCC
Q 009310 338 DKNSDKYILELQPAIKGLESQ---IFEADLVLWTVGS--KPLLP 376 (538)
Q Consensus 338 ~~~~~~v~~~~~~~~~~~~g~---~l~~D~vI~a~G~--~p~~~ 376 (538)
+.+++.+. ...+|+ ++.+|.||+|+|. .|+.+
T Consensus 146 ----~~~~V~~~---~~~~G~~~~~~~~d~VVvAtG~~s~p~~p 182 (447)
T 2gv8_A 146 ----GSWVVTYK---GTKAGSPISKDIFDAVSICNGHYEVPYIP 182 (447)
T ss_dssp ----TEEEEEEE---ESSTTCCEEEEEESEEEECCCSSSSBCBC
T ss_pred ----CeEEEEEe---ecCCCCeeEEEEeCEEEECCCCCCCCCCC
Confidence 44444433 111244 7999999999999 66644
No 214
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.03 E-value=7.7e-06 Score=85.72 Aligned_cols=98 Identities=13% Similarity=0.189 Sum_probs=72.8
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe-
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (538)
.++|+|||||+.|+.+|..|++ .|.+|+++++.+.+. . ...++...+.+.+++.+++++.+
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~~l---------~---~~~~~~~~l~~~l~~~Gv~i~~~~ 237 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFAR------LGSKVTVLARNTLFF---------R---EDPAIGEAVTAAFRAEGIEVLEHT 237 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSCTTT---------T---SCHHHHHHHHHHHHHTTCEEETTC
T ss_pred CCEEEEECCCHHHHHHHHHHHH------cCCEEEEEEECCccC---------C---CCHHHHHHHHHHHHhCCCEEEcCC
Confidence 5799999999999999999998 577999999987531 1 11234445666777889999875
Q ss_pred eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCC
Q 009310 158 RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLD 206 (538)
Q Consensus 158 ~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p 206 (538)
.|++++.+... ..+.+++ .++.+|.||+|+|..|+..
T Consensus 238 ~v~~i~~~~~~-----------~~v~~~~-~~i~aD~Vv~a~G~~p~~~ 274 (467)
T 1zk7_A 238 QASQVAHMDGE-----------FVLTTTH-GELRADKLLVATGRTPNTR 274 (467)
T ss_dssp CEEEEEEETTE-----------EEEEETT-EEEEESEEEECSCEEESCT
T ss_pred EEEEEEEeCCE-----------EEEEECC-cEEEcCEEEECCCCCcCCC
Confidence 88888643321 1345554 4899999999999987653
No 215
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.03 E-value=1.8e-05 Score=84.18 Aligned_cols=98 Identities=11% Similarity=0.056 Sum_probs=73.1
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCcc------------------------------------C-CCC-
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTI------------------------------------C-PTG- 286 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~------------------------------------l-~~~- 286 (538)
.+|+|||+|+.|+.+|..|++.+.+ |+++++.+.+ + ...
T Consensus 108 ~DVVIVGgGpaGL~aA~~La~~G~k---V~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~ 184 (549)
T 3nlc_A 108 ERPIVIGFGPCGLFAGLVLAQMGFN---PIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK 184 (549)
T ss_dssp CCCEEECCSHHHHHHHHHHHHTTCC---CEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCe---EEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEec
Confidence 5899999999999999999987655 9999987432 0 000
Q ss_pred C----------------------------------hhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcc
Q 009310 287 T----------------------------------PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAI 332 (538)
Q Consensus 287 ~----------------------------------~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~ 332 (538)
. ..+.+.+.+.+++.|+++++++.|+++..++
T Consensus 185 ~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~-------------- 250 (549)
T 3nlc_A 185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMED-------------- 250 (549)
T ss_dssp CTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESS--------------
T ss_pred cccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeC--------------
Confidence 0 2234456677888999999999999998654
Q ss_pred cccccccCCCceE-EeecccccCCcceEEeccEEEEecCCCCC
Q 009310 333 PNIAADKNSDKYI-LELQPAIKGLESQIFEADLVLWTVGSKPL 374 (538)
Q Consensus 333 ~~~~~~~~~~~v~-~~~~~~~~~~~g~~l~~D~vI~a~G~~p~ 374 (538)
+.+. +.+. +++++.+|.||+|+|..+.
T Consensus 251 ---------~~v~gV~l~------~G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 251 ---------GQITGVTLS------NGEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp ---------SBEEEEEET------TSCEEECSCEEECCCTTCH
T ss_pred ---------CEEEEEEEC------CCCEEECCEEEECCCCChh
Confidence 2222 3332 6778999999999999884
No 216
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.02 E-value=1.6e-05 Score=84.21 Aligned_cols=37 Identities=14% Similarity=0.395 Sum_probs=33.1
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCc
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~ 120 (538)
..+||||||||+|||+||..|++ .|++|+||||.+..
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~------~G~~V~vlEk~~~~ 76 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAAR------AGADVLVLERTSGW 76 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHH------CCCcEEEEeCCCCC
Confidence 45799999999999999999999 68899999998743
No 217
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.01 E-value=1.1e-05 Score=84.94 Aligned_cols=102 Identities=18% Similarity=0.314 Sum_probs=76.2
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (538)
..++|+|||+|+.|+.+|..|++ .|.+|+++++.+.+. ... ..++...+.+.+++.+++++.+
T Consensus 190 ~~~~v~ViGgG~~g~e~A~~l~~------~g~~Vtli~~~~~~l----------~~~-~~~~~~~l~~~l~~~Gv~i~~~ 252 (484)
T 3o0h_A 190 LPKSIVIVGGGYIGVEFANIFHG------LGVKTTLLHRGDLIL----------RNF-DYDLRQLLNDAMVAKGISIIYE 252 (484)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSS----------TTS-CHHHHHHHHHHHHHHTCEEESS
T ss_pred cCCcEEEECcCHHHHHHHHHHHH------cCCeEEEEECCCccc----------ccc-CHHHHHHHHHHHHHCCCEEEeC
Confidence 35799999999999999999998 577999999987631 111 1233344566666779999984
Q ss_pred -eEEEEcCCCCcCcCCCceeecccEEEcCCceEEEeeEEEEeCCCCCCCCC
Q 009310 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLESGLIVEYDWLVLSLGAEPKLDV 207 (538)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~yD~lVlAtG~~~~~p~ 207 (538)
.|+.+..+... ..+.+++|..+.+|.||+|+|..|+...
T Consensus 253 ~~V~~i~~~~~~-----------v~v~~~~g~~i~aD~Vi~A~G~~p~~~~ 292 (484)
T 3o0h_A 253 ATVSQVQSTENC-----------YNVVLTNGQTICADRVMLATGRVPNTTG 292 (484)
T ss_dssp CCEEEEEECSSS-----------EEEEETTSCEEEESEEEECCCEEECCTT
T ss_pred CEEEEEEeeCCE-----------EEEEECCCcEEEcCEEEEeeCCCcCCCC
Confidence 88888654321 1477778889999999999998876543
No 218
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.00 E-value=9.8e-06 Score=86.77 Aligned_cols=38 Identities=26% Similarity=0.414 Sum_probs=32.4
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
..++|||||||+||+++|..|++... .|++|+|||+.+
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~---~G~~V~liE~~~ 61 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQ---GTADITLLQAPD 61 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTT---TSSEEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcC---CCCcEEEEeCCC
Confidence 35799999999999999999998421 578999999965
No 219
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.00 E-value=7.7e-06 Score=86.75 Aligned_cols=37 Identities=30% Similarity=0.413 Sum_probs=29.9
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
.++|||||||++|+++|..|++... .|++|+|||+.+
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~---~G~~V~lvE~~~ 38 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFD---DRIDVTLVESGN 38 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHG---GGSEEEEEEC--
T ss_pred cceEEEECCCHHHHHHHHHHHhhcC---CCCEEEEEecCC
Confidence 4799999999999999999998220 367999999975
No 220
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.99 E-value=1.2e-05 Score=84.86 Aligned_cols=102 Identities=20% Similarity=0.279 Sum_probs=73.1
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (538)
..++|+|||||+.|+.+|..|++ .|.+|+++++.+.+.. . ...++...+.+.+++.+++++.+
T Consensus 197 ~~~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~~l~----------~-~d~~~~~~l~~~l~~~gV~v~~~ 259 (491)
T 3urh_A 197 VPASMIVVGGGVIGLELGSVWAR------LGAKVTVVEFLDTILG----------G-MDGEVAKQLQRMLTKQGIDFKLG 259 (491)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH------HTCEEEEECSSSSSSS----------S-SCHHHHHHHHHHHHHTTCEEECS
T ss_pred cCCeEEEECCCHHHHHHHHHHHH------cCCEEEEEeccccccc----------c-CCHHHHHHHHHHHHhCCCEEEEC
Confidence 35799999999999999999998 4679999999876311 1 11333445666777889999885
Q ss_pred -eEEEEcCCCCcCcCCCceeecccEEEcC---Cc--eEEEeeEEEEeCCCCCCCCC
Q 009310 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLE---SG--LIVEYDWLVLSLGAEPKLDV 207 (538)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~~~---~g--~~~~yD~lVlAtG~~~~~p~ 207 (538)
+++.+..+... ..+.+. +| ..+.+|.||+|+|..|+...
T Consensus 260 ~~v~~i~~~~~~-----------~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~ 304 (491)
T 3urh_A 260 AKVTGAVKSGDG-----------AKVTFEPVKGGEATTLDAEVVLIATGRKPSTDG 304 (491)
T ss_dssp EEEEEEEEETTE-----------EEEEEEETTSCCCEEEEESEEEECCCCEECCTT
T ss_pred CeEEEEEEeCCE-----------EEEEEEecCCCceEEEEcCEEEEeeCCccCCCc
Confidence 78888644321 123332 13 58999999999998876543
No 221
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.99 E-value=4e-05 Score=77.78 Aligned_cols=96 Identities=20% Similarity=0.203 Sum_probs=72.9
Q ss_pred CCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCC--------------------------------------
Q 009310 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT-------------------------------------- 285 (538)
Q Consensus 244 ~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~-------------------------------------- 285 (538)
..+|+|||||++|+.+|..|++.+.+ |+++++.+.+...
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~---v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 87 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWD---VRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMH 87 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEET
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCC---EEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeC
Confidence 35899999999999999999987655 9999987654210
Q ss_pred ------CC-----------hhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEee
Q 009310 286 ------GT-----------PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILEL 348 (538)
Q Consensus 286 ------~~-----------~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 348 (538)
++ ..+.+.+.+.+++.||+++.+++|++++. + + .+.+
T Consensus 88 g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~-----------------------~--~v~~ 141 (379)
T 3alj_A 88 NKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP-V-----------------------G--RLTL 141 (379)
T ss_dssp TEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET-T-----------------------T--EEEE
T ss_pred CceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe-C-----------------------C--EEEE
Confidence 00 22345566777888999999999999976 2 3 3433
Q ss_pred cccccCCcceEEeccEEEEecCCCCC
Q 009310 349 QPAIKGLESQIFEADLVLWTVGSKPL 374 (538)
Q Consensus 349 ~~~~~~~~g~~l~~D~vI~a~G~~p~ 374 (538)
. +|+++.+|.||.|+|..+.
T Consensus 142 ~------~g~~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 142 Q------TGEVLEADLIVGADGVGSK 161 (379)
T ss_dssp T------TSCEEECSEEEECCCTTCH
T ss_pred C------CCCEEEcCEEEECCCccHH
Confidence 2 5678999999999998765
No 222
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.98 E-value=3.1e-05 Score=76.00 Aligned_cols=102 Identities=14% Similarity=0.037 Sum_probs=72.4
Q ss_pred CCeEEEECCChhHHHHHHHHHHHHHhcCcEEE-EecCCcc------------CCCCC-----hhhHHHHHHHHHhCCCEE
Q 009310 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQA-INVETTI------------CPTGT-----PGNREAALKVLSARKVQL 305 (538)
Q Consensus 244 ~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtl-v~~~~~~------------l~~~~-----~~~~~~~~~~l~~~gV~v 305 (538)
..+|+|||+|+.|+.+|..|++.+.+ |++ +++. .+ .+.++ .++...+.+.+++.|+++
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~---v~li~e~~-~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 79 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLK---NVVMFEKG-MPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKH 79 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCS---CEEEECSS-STTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEE
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCC---eEEEEeCC-CCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEE
Confidence 35899999999999999999987665 888 9873 21 12222 356677778888999999
Q ss_pred EcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCC
Q 009310 306 VLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHV 378 (538)
Q Consensus 306 ~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l 378 (538)
+.+ .|.++ .++.. +.+.+.+. .++ ++.+|.+|+|+|.+|..+.+
T Consensus 80 ~~~-~v~~i-~~~~~---------------------~~~~v~~~-----~~~-~~~~d~lvlAtG~~~~~~~~ 123 (315)
T 3r9u_A 80 EMV-GVEQI-LKNSD---------------------GSFTIKLE-----GGK-TELAKAVIVCTGSAPKKAGF 123 (315)
T ss_dssp ECC-CEEEE-EECTT---------------------SCEEEEET-----TSC-EEEEEEEEECCCEEECCCCC
T ss_pred EEE-EEEEE-ecCCC---------------------CcEEEEEe-----cCC-EEEeCEEEEeeCCCCCCCCC
Confidence 998 78888 32200 23442121 133 89999999999998875433
No 223
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.97 E-value=1.4e-05 Score=85.30 Aligned_cols=37 Identities=24% Similarity=0.457 Sum_probs=31.5
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
.++|||||||++|+++|..|++.. ..|++|+|||+.+
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~---~~G~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRAL---QQQANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC---CSSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhc---CCCCEEEEECCCC
Confidence 479999999999999999999832 1478999999965
No 224
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.97 E-value=2.1e-05 Score=78.14 Aligned_cols=98 Identities=14% Similarity=0.063 Sum_probs=72.7
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEec----CCcc------------CCCCC-----hhhHHHHHHHHHhCCC
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINV----ETTI------------CPTGT-----PGNREAALKVLSARKV 303 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~----~~~~------------l~~~~-----~~~~~~~~~~l~~~gV 303 (538)
.+|+|||+|+.|+.+|..|++.+.+ |+++++ ...+ .+.++ ..+...+.+.+++.|+
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~g~~---v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv 85 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARAELK---PLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGT 85 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---CEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCe---EEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCC
Confidence 4899999999999999999887654 999987 2211 11221 2455666777888999
Q ss_pred EEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCC
Q 009310 304 QLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLP 376 (538)
Q Consensus 304 ~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~ 376 (538)
+++.++ +..++.+. +.+++.+ ++..+.+|.||+|+|..|..+
T Consensus 86 ~~~~~~-v~~i~~~~-----------------------~~~~v~~-------~~~~~~~~~vv~A~G~~~~~~ 127 (333)
T 1vdc_A 86 TIFTET-VTKVDFSS-----------------------KPFKLFT-------DSKAILADAVILAIGAVAKRL 127 (333)
T ss_dssp EEECCC-CCEEECSS-----------------------SSEEEEC-------SSEEEEEEEEEECCCEEECCC
T ss_pred EEEEeE-EEEEEEcC-----------------------CEEEEEE-------CCcEEEcCEEEECCCCCcCCC
Confidence 999987 88887644 4455542 467899999999999987654
No 225
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.96 E-value=1.9e-05 Score=82.69 Aligned_cols=102 Identities=14% Similarity=0.215 Sum_probs=76.1
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (538)
..++++|||||+.|+.+|..|++ .|.+|+++++.+.+. + . ...++...+.+.+++.+++++.+
T Consensus 169 ~~~~v~ViGgG~~g~e~A~~l~~------~g~~Vt~v~~~~~~l--~--------~-~~~~~~~~l~~~l~~~Gv~i~~~ 231 (463)
T 4dna_A 169 LPESILIAGGGYIAVEFANIFHG------LGVKTTLIYRGKEIL--S--------R-FDQDMRRGLHAAMEEKGIRILCE 231 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSS--T--------T-SCHHHHHHHHHHHHHTTCEEECS
T ss_pred CCCeEEEECCCHHHHHHHHHHHH------cCCeEEEEEcCCccc--c--------c-cCHHHHHHHHHHHHHCCCEEECC
Confidence 35799999999999999999998 577999999987531 1 1 11233445666777889999985
Q ss_pred -eEEEEcCCCCcCcCCCceeecccEEE-cCCceEEEeeEEEEeCCCCCCCCC
Q 009310 158 -RVKLLCPSDHLGVNGPMACTHGGTVL-LESGLIVEYDWLVLSLGAEPKLDV 207 (538)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~-~~~g~~~~yD~lVlAtG~~~~~p~ 207 (538)
.|+.+..+..- ...+. +++|+ +.+|.||+|+|..|+...
T Consensus 232 ~~v~~i~~~~~~----------~~~v~~~~~g~-i~aD~Vv~a~G~~p~~~~ 272 (463)
T 4dna_A 232 DIIQSVSADADG----------RRVATTMKHGE-IVADQVMLALGRMPNTNG 272 (463)
T ss_dssp CCEEEEEECTTS----------CEEEEESSSCE-EEESEEEECSCEEESCTT
T ss_pred CEEEEEEEcCCC----------EEEEEEcCCCe-EEeCEEEEeeCcccCCCC
Confidence 88888654220 01467 77887 999999999999876553
No 226
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=97.96 E-value=2.8e-05 Score=79.74 Aligned_cols=100 Identities=16% Similarity=0.233 Sum_probs=71.9
Q ss_pred eEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCC-----------------C-----------------------
Q 009310 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICP-----------------T----------------------- 285 (538)
Q Consensus 246 ~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~-----------------~----------------------- 285 (538)
+|+|||+|+.|+.+|..+++.+.+ |+++++.+.+.. .
T Consensus 6 dViIIGgG~aGl~aA~~la~~G~~---V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (401)
T 2gqf_A 6 ENIIIGAGAAGLFCAAQLAKLGKS---VTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWD 82 (401)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHH
T ss_pred CEEEECCcHHHHHHHHHHHhCCCC---EEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHH
Confidence 799999999999999999987665 999998764310 0
Q ss_pred ------------------------CChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCC
Q 009310 286 ------------------------GTPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNS 341 (538)
Q Consensus 286 ------------------------~~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (538)
....+.+.+.+.+++.||++++++.|+++..+++.. .
T Consensus 83 ~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~-------------------~ 143 (401)
T 2gqf_A 83 FISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDE-------------------K 143 (401)
T ss_dssp HHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCS-------------------S
T ss_pred HHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcC-------------------C
Confidence 012233456677788899999999999997541000 0
Q ss_pred CceEEeecccccCCcceEEeccEEEEecCCCCC
Q 009310 342 DKYILELQPAIKGLESQIFEADLVLWTVGSKPL 374 (538)
Q Consensus 342 ~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~ 374 (538)
+.+.+... ++ ++.+|.||+|+|..+.
T Consensus 144 ~~~~v~~~------~g-~i~ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 144 VRFVLQVN------ST-QWQCKNLIVATGGLSM 169 (401)
T ss_dssp CCEEEEET------TE-EEEESEEEECCCCSSC
T ss_pred CeEEEEEC------CC-EEECCEEEECCCCccC
Confidence 34555432 34 7999999999999874
No 227
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.95 E-value=4.5e-05 Score=79.78 Aligned_cols=112 Identities=17% Similarity=0.163 Sum_probs=73.3
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCc---EEEEecCCccCC-------------------------------------
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGI---VQAINVETTICP------------------------------------- 284 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~---Vtlv~~~~~~l~------------------------------------- 284 (538)
++|+|||+|+.|+.+|..|++....... |+++++.+.+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 5899999999999999999873222223 999998754310
Q ss_pred CCC---------------hhhHHHHHHHHHhCCCE--EEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEe
Q 009310 285 TGT---------------PGNREAALKVLSARKVQ--LVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILE 347 (538)
Q Consensus 285 ~~~---------------~~~~~~~~~~l~~~gV~--v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 347 (538)
.++ ..+.+++.+.+++.|++ +.+++.|+.++.+++. +..++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~---------------------~~~~V~ 141 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDS---------------------QTFTVT 141 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTT---------------------TEEEEE
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCC---------------------CcEEEE
Confidence 000 23345566667778998 9999999999864310 133444
Q ss_pred ecccccCCcceEEeccEEEEecC--CCCCCCCC
Q 009310 348 LQPAIKGLESQIFEADLVLWTVG--SKPLLPHV 378 (538)
Q Consensus 348 ~~~~~~~~~g~~l~~D~vI~a~G--~~p~~~~l 378 (538)
+.+.. .+...++.+|.||+|+| .+|+.+.+
T Consensus 142 ~~~~~-~g~~~~~~~d~VVvAtG~~s~p~~p~i 173 (464)
T 2xve_A 142 VQDHT-TDTIYSEEFDYVVCCTGHFSTPYVPEF 173 (464)
T ss_dssp EEETT-TTEEEEEEESEEEECCCSSSSBCCCCC
T ss_pred EEEcC-CCceEEEEcCEEEECCCCCCCCccCCC
Confidence 32100 01126789999999999 67775533
No 228
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.95 E-value=9.2e-06 Score=86.96 Aligned_cols=36 Identities=33% Similarity=0.503 Sum_probs=32.5
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
..++|+|||||++|+++|..|++ .|++|+|||+.+.
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~------~G~~V~vlEr~~~ 60 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAH------RQVGHLVVEQTDG 60 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHH------CCCCEEEEeCCCC
Confidence 34799999999999999999999 6889999999764
No 229
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.94 E-value=2.7e-05 Score=83.15 Aligned_cols=104 Identities=16% Similarity=0.141 Sum_probs=76.0
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccC--------CC-------------C----------------C
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTIC--------PT-------------G----------------T 287 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l--------~~-------------~----------------~ 287 (538)
.+|+|||+|++|+.+|..|.+.+.+ |+++++.+.+. +. + .
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~~G~~---v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~ 98 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRSQGLT---VRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQ 98 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBH
T ss_pred CCEEEECchHHHHHHHHHHHhCCCC---EEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCH
Confidence 4899999999999999999886554 99999865332 00 0 1
Q ss_pred hhhHHHHHHHHHhCCC--EEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEE
Q 009310 288 PGNREAALKVLSARKV--QLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLV 365 (538)
Q Consensus 288 ~~~~~~~~~~l~~~gV--~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~v 365 (538)
+++.+++.+..++.|+ ++.+++.|++++.++.. ..+++.+. +|+++.+|.|
T Consensus 99 ~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~---------------------~~w~V~~~------~G~~i~ad~l 151 (549)
T 4ap3_A 99 PEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEG---------------------LRWTVRTD------RGDEVSARFL 151 (549)
T ss_dssp HHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTT---------------------TEEEEEET------TCCEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCC---------------------CEEEEEEC------CCCEEEeCEE
Confidence 3455667777888898 89999999998764411 24455533 6778999999
Q ss_pred EEecC--CCCCCCCC
Q 009310 366 LWTVG--SKPLLPHV 378 (538)
Q Consensus 366 I~a~G--~~p~~~~l 378 (538)
|+|+| .+|..+-+
T Consensus 152 V~AtG~~s~p~~p~i 166 (549)
T 4ap3_A 152 VVAAGPLSNANTPAF 166 (549)
T ss_dssp EECCCSEEECCCCCC
T ss_pred EECcCCCCCCCCCCC
Confidence 99999 56665433
No 230
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.91 E-value=3e-05 Score=76.43 Aligned_cols=98 Identities=11% Similarity=0.128 Sum_probs=71.9
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCc-----------cCCCC-----ChhhHHHHHHHHHhCCCEEEcC
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT-----------ICPTG-----TPGNREAALKVLSARKVQLVLG 308 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~-----------~l~~~-----~~~~~~~~~~~l~~~gV~v~~~ 308 (538)
.+|+|||+|+.|+.+|..|++.+.+ |+++++... ..+.+ .+.+.+.+.+.+++.|++++.+
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAARANLQ---PVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFD 82 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCC---CEEECCSSTTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCc---EEEEccCCCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEe
Confidence 4899999999999999999876554 899985310 11222 1345566677788899999998
Q ss_pred ceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCC
Q 009310 309 YFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLP 376 (538)
Q Consensus 309 ~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~ 376 (538)
+ +..++.+. +.+++ .. ++..+.+|.+|+|+|.+|..+
T Consensus 83 ~-v~~i~~~~-----------------------~~~~v-~~------~~~~~~~~~lv~AtG~~~~~~ 119 (320)
T 1trb_A 83 H-INKVDLQN-----------------------RPFRL-NG------DNGEYTCDALIIATGASARYL 119 (320)
T ss_dssp C-EEEEECSS-----------------------SSEEE-EE------SSCEEEEEEEEECCCEEECCC
T ss_pred e-eeEEEecC-----------------------CEEEE-Ee------CCCEEEcCEEEECCCCCcCCC
Confidence 6 88887643 44444 22 567899999999999987644
No 231
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.91 E-value=3.2e-05 Score=79.05 Aligned_cols=98 Identities=16% Similarity=0.258 Sum_probs=71.7
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCC---------------------------------------
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT--------------------------------------- 285 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~--------------------------------------- 285 (538)
.+|+|||+|+.|+.+|..|++.+.+ |+++++.+.+...
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~---V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHR---VVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHD 83 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEET
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCc---EEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCC
Confidence 4899999999999999999987655 9999876543000
Q ss_pred ------C---------------ChhhHHHHHHHHHhC-CCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCc
Q 009310 286 ------G---------------TPGNREAALKVLSAR-KVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDK 343 (538)
Q Consensus 286 ------~---------------~~~~~~~~~~~l~~~-gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (538)
+ ...+.+.+.+.+++. |++++.+++|++++.++ ++
T Consensus 84 g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~-----------------------~~ 140 (399)
T 2x3n_A 84 GELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDE-----------------------RH 140 (399)
T ss_dssp TEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECT-----------------------TS
T ss_pred CCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcC-----------------------Cc
Confidence 0 012334455666666 89999999999998754 44
Q ss_pred e--EEeecccccCCcceEEeccEEEEecCCCCC
Q 009310 344 Y--ILELQPAIKGLESQIFEADLVLWTVGSKPL 374 (538)
Q Consensus 344 v--~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~ 374 (538)
+ .+.+. +|+++.+|.||.|.|....
T Consensus 141 v~g~v~~~------~g~~~~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 141 AIDQVRLN------DGRVLRPRVVVGADGIASY 167 (399)
T ss_dssp CEEEEEET------TSCEEEEEEEEECCCTTCH
T ss_pred eEEEEEEC------CCCEEECCEEEECCCCChH
Confidence 5 55543 5668999999999998764
No 232
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.90 E-value=2.2e-05 Score=77.48 Aligned_cols=38 Identities=21% Similarity=0.272 Sum_probs=32.8
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCc
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~ 120 (538)
.+||+|||||++|+++|..|++.+ +|++|+|+|+++..
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~----~g~~V~v~e~~~~~ 102 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNR----PDLKVCIIESSVAP 102 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHC----TTSCEEEECSSSSC
T ss_pred cCCEEEECccHHHHHHHHHHHhcC----CCCeEEEEecCccc
Confidence 469999999999999999999831 38899999997754
No 233
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.89 E-value=2.8e-05 Score=81.64 Aligned_cols=103 Identities=19% Similarity=0.204 Sum_probs=72.8
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (538)
..++|+|||||+.|+.+|..|++ .|.+|+++++.+.+. .. ...++...+.+.+++.+++++.+
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~~l----------~~-~d~~~~~~~~~~l~~~gv~i~~~ 248 (478)
T 3dk9_A 186 LPGRSVIVGAGYIAVEMAGILSA------LGSKTSLMIRHDKVL----------RS-FDSMISTNCTEELENAGVEVLKF 248 (478)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSC----------TT-SCHHHHHHHHHHHHHTTCEEETT
T ss_pred cCccEEEECCCHHHHHHHHHHHH------cCCeEEEEEeCCccc----------cc-cCHHHHHHHHHHHHHCCCEEEeC
Confidence 35799999999999999999998 577999999987631 11 11233445566777889999875
Q ss_pred -eEEEEcCCCCcCcCCCceeecccEEEcCC-------ceEEEeeEEEEeCCCCCCCC
Q 009310 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLES-------GLIVEYDWLVLSLGAEPKLD 206 (538)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~~~~-------g~~~~yD~lVlAtG~~~~~p 206 (538)
.++.+.....- .. ..+.+.+ +..+.+|.||+|+|..|+..
T Consensus 249 ~~v~~i~~~~~~------~~---~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~ 296 (478)
T 3dk9_A 249 SQVKEVKKTLSG------LE---VSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTK 296 (478)
T ss_dssp EEEEEEEECSSS------EE---EEEEECCTTSCCEEEEEEEESEEEECSCEEESCT
T ss_pred CEEEEEEEcCCC------cE---EEEEEccCCCCcccceEEEcCEEEEeeccccCCC
Confidence 78888643210 00 0244433 26799999999999887654
No 234
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.89 E-value=1.2e-05 Score=84.99 Aligned_cols=34 Identities=21% Similarity=0.450 Sum_probs=31.5
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
.+||+|||||++|+++|+.|++ +|++|+|+|+++
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~------~G~~V~llE~~~ 36 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAG------RGLSVLMLEAQD 36 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH------TTCCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHh------CCCCEEEEECCC
Confidence 4799999999999999999999 788999999975
No 235
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.88 E-value=4.2e-05 Score=75.55 Aligned_cols=98 Identities=15% Similarity=0.095 Sum_probs=71.1
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCc-----------cCCCC----ChhhHHHHHHHHHhCCCEEEcCc
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT-----------ICPTG----TPGNREAALKVLSARKVQLVLGY 309 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~-----------~l~~~----~~~~~~~~~~~l~~~gV~v~~~~ 309 (538)
.+|+|||+|+.|+.+|..|++.+.+ |+++++... -.+.+ ...+.+.+.+.+++.|++++. .
T Consensus 17 ~dvvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~ 92 (319)
T 3cty_A 17 FDVVIVGAGAAGFSAAVYAARSGFS---VAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREG-V 92 (319)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEET-C
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCc---EEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEE-e
Confidence 4799999999999999999887654 999998421 01111 134455667778889999998 6
Q ss_pred eeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCC
Q 009310 310 FVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLP 376 (538)
Q Consensus 310 ~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~ 376 (538)
.+..++.++ +.+.+.. ++.++.+|.+|+|+|..|..+
T Consensus 93 ~v~~i~~~~-----------------------~~~~v~~-------~~~~~~~~~li~AtG~~~~~~ 129 (319)
T 3cty_A 93 EVRSIKKTQ-----------------------GGFDIET-------NDDTYHAKYVIITTGTTHKHL 129 (319)
T ss_dssp CEEEEEEET-----------------------TEEEEEE-------SSSEEEEEEEEECCCEEECCC
T ss_pred eEEEEEEeC-----------------------CEEEEEE-------CCCEEEeCEEEECCCCCcccC
Confidence 788887643 3344432 345799999999999987643
No 236
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=97.88 E-value=1.3e-05 Score=90.15 Aligned_cols=35 Identities=31% Similarity=0.452 Sum_probs=31.8
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCC-EEEEEcCCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSER 119 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~~~ 119 (538)
.+||||||||++|+++|++|++ .|+ +|+|||+++.
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~------~G~~~V~vlE~~~~ 39 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVT------RGWNNITVLDQGPL 39 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH------TTCCCEEEECSSCT
T ss_pred CCCEEEECcCHHHHHHHHHHHh------CCCCcEEEEeCCCC
Confidence 4799999999999999999999 677 9999999763
No 237
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.88 E-value=4.8e-05 Score=74.66 Aligned_cols=102 Identities=15% Similarity=0.200 Sum_probs=65.3
Q ss_pred eEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCc---cC---CCC-------ChhhHHHHHHHHHhCCCEEEcCceee
Q 009310 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT---IC---PTG-------TPGNREAALKVLSARKVQLVLGYFVR 312 (538)
Q Consensus 246 ~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~---~l---~~~-------~~~~~~~~~~~l~~~gV~v~~~~~V~ 312 (538)
.|+|||+|+.|+.+|..+++.+.+ |+++++... +. +.+ ++++.+...+.+.+.+...+....+.
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~---v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQ---IALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEKTVV 84 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC---EEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEECCEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCC---EEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEeeEEE
Confidence 699999999999999999887655 999997531 10 111 23444555555656554433344444
Q ss_pred EEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCC
Q 009310 313 CIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHV 378 (538)
Q Consensus 313 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l 378 (538)
.+...+. +..++... +++++.+|.||+|||.+|..+-+
T Consensus 85 ~~~~~~~----------------------~~~~v~~~------~g~~~~a~~liiATGs~p~~p~i 122 (304)
T 4fk1_A 85 MITKQST----------------------GLFEIVTK------DHTKYLAERVLLATGMQEEFPSI 122 (304)
T ss_dssp EEEECTT----------------------SCEEEEET------TCCEEEEEEEEECCCCEEECCSC
T ss_pred EeeecCC----------------------CcEEEEEC------CCCEEEeCEEEEccCCccccccc
Confidence 4443221 23344322 77899999999999998875433
No 238
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.87 E-value=4.2e-05 Score=81.47 Aligned_cols=102 Identities=16% Similarity=0.228 Sum_probs=74.5
Q ss_pred CeEEEECCChhHHHHHHHHH-HHHHhcCcEEEEecCCccC--------CCC-----------------------------
Q 009310 245 IRVAVVGCGYSGVELAATVS-ERLEEKGIVQAINVETTIC--------PTG----------------------------- 286 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~-~~~~~~~~Vtlv~~~~~~l--------~~~----------------------------- 286 (538)
.+|+|||+|++|+.+|..|+ +.+.+ |+++++.+.+. +..
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~---v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~ 85 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLT---TVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYIT 85 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCC---EEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCC---EEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCC
Confidence 48999999999999999998 65443 99999965432 110
Q ss_pred ChhhHHHHHHHHHhCCC--EEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccE
Q 009310 287 TPGNREAALKVLSARKV--QLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADL 364 (538)
Q Consensus 287 ~~~~~~~~~~~l~~~gV--~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~ 364 (538)
.+++.+++.+..++.|+ ++.+++.|++++.+++. +.+++.+. +|+++.+|.
T Consensus 86 ~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~---------------------~~~~V~~~------~G~~i~ad~ 138 (540)
T 3gwf_A 86 QPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDE---------------------NLWEVTTD------HGEVYRAKY 138 (540)
T ss_dssp HHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTT---------------------TEEEEEET------TSCEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCC---------------------CEEEEEEc------CCCEEEeCE
Confidence 12455667777888898 89999999998765421 24455543 677899999
Q ss_pred EEEecCC--CCCCC
Q 009310 365 VLWTVGS--KPLLP 376 (538)
Q Consensus 365 vI~a~G~--~p~~~ 376 (538)
||+|+|. +|..+
T Consensus 139 lV~AtG~~s~p~~p 152 (540)
T 3gwf_A 139 VVNAVGLLSAINFP 152 (540)
T ss_dssp EEECCCSCCSBCCC
T ss_pred EEECCcccccCCCC
Confidence 9999995 56544
No 239
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.87 E-value=5e-05 Score=75.58 Aligned_cols=98 Identities=14% Similarity=0.073 Sum_probs=71.2
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCC---c--------cCCCCC-----hhhHHHHHHHHHhCCCEEEcC
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVET---T--------ICPTGT-----PGNREAALKVLSARKVQLVLG 308 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~---~--------~l~~~~-----~~~~~~~~~~l~~~gV~v~~~ 308 (538)
.+|+|||+|+.|+.+|..|++.+.+ |+++++.. . ..+.++ +.+.+.+.+.+++.|++++.+
T Consensus 15 ~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~ 91 (335)
T 2a87_A 15 RDVIVIGSGPAGYTAALYAARAQLA---PLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRME 91 (335)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTTCC---CEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCe---EEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEEEe
Confidence 5899999999999999999886554 89998531 0 012221 345566677788899999998
Q ss_pred ceeeEEeccccccccccCCCCCcccccccccCCCceEE-eecccccCCcceEEeccEEEEecCCCCCCC
Q 009310 309 YFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYIL-ELQPAIKGLESQIFEADLVLWTVGSKPLLP 376 (538)
Q Consensus 309 ~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~ 376 (538)
+ +..++. . +.+++ .+. +++++.+|.||+|+|..|..+
T Consensus 92 ~-v~~i~~-~-----------------------~~~~v~~~~------~g~~~~~d~lviAtG~~~~~~ 129 (335)
T 2a87_A 92 D-VESVSL-H-----------------------GPLKSVVTA------DGQTHRARAVILAMGAAARYL 129 (335)
T ss_dssp C-EEEEEC-S-----------------------SSSEEEEET------TSCEEEEEEEEECCCEEECCC
T ss_pred e-EEEEEe-C-----------------------CcEEEEEeC------CCCEEEeCEEEECCCCCccCC
Confidence 7 888775 2 33333 322 567899999999999987644
No 240
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.87 E-value=4.3e-05 Score=81.55 Aligned_cols=104 Identities=17% Similarity=0.273 Sum_probs=74.0
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccC--------C-----------------------C------CC
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTIC--------P-----------------------T------GT 287 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l--------~-----------------------~------~~ 287 (538)
.+|+|||+|++|+.+|..|.+.+.+ |+++++.+.+. | . ..
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g~~---v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~ 86 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAGMK---VLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQ 86 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCC---EEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCH
Confidence 4899999999999999999875544 99999975431 0 0 01
Q ss_pred hhhHHHHHHHHHhCCC--EEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEE
Q 009310 288 PGNREAALKVLSARKV--QLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLV 365 (538)
Q Consensus 288 ~~~~~~~~~~l~~~gV--~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~v 365 (538)
+++..++.+..++.|+ .+.+++.|++++.++.. +.+++.+. +|+++.+|.|
T Consensus 87 ~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~---------------------~~w~V~~~------~G~~~~ad~l 139 (545)
T 3uox_A 87 PEMLRYVNRAADAMDVRKHYRFNTRVTAARYVEND---------------------RLWEVTLD------NEEVVTCRFL 139 (545)
T ss_dssp HHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGG---------------------TEEEEEET------TTEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCC---------------------CEEEEEEC------CCCEEEeCEE
Confidence 4456667777788888 78999999998764311 34455533 6788999999
Q ss_pred EEecC--CCCCCCCC
Q 009310 366 LWTVG--SKPLLPHV 378 (538)
Q Consensus 366 I~a~G--~~p~~~~l 378 (538)
|+|+| .+|..+-+
T Consensus 140 V~AtG~~s~p~~p~i 154 (545)
T 3uox_A 140 ISATGPLSASRMPDI 154 (545)
T ss_dssp EECCCSCBC---CCC
T ss_pred EECcCCCCCCcCCCC
Confidence 99999 66765433
No 241
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.86 E-value=5.2e-05 Score=80.51 Aligned_cols=104 Identities=13% Similarity=0.040 Sum_probs=74.5
Q ss_pred CCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCC--ccC--------CC----CChhhHHHHHHHHHhCCCEEEcCc
Q 009310 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVET--TIC--------PT----GTPGNREAALKVLSARKVQLVLGY 309 (538)
Q Consensus 244 ~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~--~~l--------~~----~~~~~~~~~~~~l~~~gV~v~~~~ 309 (538)
..+|+|||||+.|+.+|..+++.+.+ |++++... ... .. ..+.+...+.+.+++.||+++.++
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~~G~~---v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~~ 288 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSARKGIR---TGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQ 288 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECSC
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCe---EEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcCC
Confidence 35799999999999999999886654 88887531 111 00 123566677788889999999999
Q ss_pred eeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCC
Q 009310 310 FVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLP 376 (538)
Q Consensus 310 ~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~ 376 (538)
.|..+..+.... +...+.+. +|+.+.+|.||+|+|.+|..+
T Consensus 289 ~v~~i~~~~~~~--------------------~~~~V~~~------~g~~~~~d~vVlAtG~~~~~~ 329 (521)
T 1hyu_A 289 SASKLVPAATEG--------------------GLHQIETA------SGAVLKARSIIIATGAKWRNM 329 (521)
T ss_dssp CEEEEECCSSTT--------------------SCEEEEET------TSCEEEEEEEEECCCEEECCC
T ss_pred EEEEEEeccCCC--------------------ceEEEEEC------CCCEEEcCEEEECCCCCcCCC
Confidence 999997532100 23444432 567899999999999887643
No 242
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.84 E-value=3.8e-05 Score=80.22 Aligned_cols=109 Identities=17% Similarity=0.068 Sum_probs=71.2
Q ss_pred eEEEECCChhHHHHHHHHHHHHHhc--CcEEEEecCCccCC-------C------------------C------------
Q 009310 246 RVAVVGCGYSGVELAATVSERLEEK--GIVQAINVETTICP-------T------------------G------------ 286 (538)
Q Consensus 246 ~VvVVGgG~~g~E~A~~l~~~~~~~--~~Vtlv~~~~~~l~-------~------------------~------------ 286 (538)
+|+|||+|+.|+.+|..|++.+.+. ..|+++++.+.+.. . .
T Consensus 32 dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~~~~ 111 (463)
T 3s5w_A 32 DLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLHKHD 111 (463)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHHHTT
T ss_pred CEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhhhcC
Confidence 7999999999999999999988330 12999998764220 0 0
Q ss_pred --------------ChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCC--ceEEeecc
Q 009310 287 --------------TPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSD--KYILELQP 350 (538)
Q Consensus 287 --------------~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~ 350 (538)
..++.+++....++.+++++++++|++++.+.... + .+++...+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~--------------------~~~~~~V~~~~ 171 (463)
T 3s5w_A 112 RLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAG--------------------QVEALRVISRN 171 (463)
T ss_dssp CHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETT--------------------EEEEEEEEEEE
T ss_pred ceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCC--------------------ceEEEEEEEec
Confidence 01222344445566789999999999998642100 1 13444321
Q ss_pred cccCCcceEEeccEEEEecCCCCCCC
Q 009310 351 AIKGLESQIFEADLVLWTVGSKPLLP 376 (538)
Q Consensus 351 ~~~~~~g~~l~~D~vI~a~G~~p~~~ 376 (538)
..+...++.+|.||+|+|..|..+
T Consensus 172 --g~g~~~~~~~d~lVlAtG~~p~~p 195 (463)
T 3s5w_A 172 --ADGEELVRTTRALVVSPGGTPRIP 195 (463)
T ss_dssp --TTSCEEEEEESEEEECCCCEECCC
T ss_pred --CCCceEEEEeCEEEECCCCCCCCc
Confidence 111122799999999999987644
No 243
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.82 E-value=3.8e-05 Score=81.66 Aligned_cols=41 Identities=27% Similarity=0.338 Sum_probs=32.2
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhccc------CCCCCCEEEEEcCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVW------QDDKKPQVLLVDQSE 118 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~------~~~~g~~V~lie~~~ 118 (538)
..++|||||||+||+.+|..|++... ....|++|+|||+.+
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 34799999999999999999998210 011578999999865
No 244
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.81 E-value=7.1e-05 Score=76.46 Aligned_cols=99 Identities=15% Similarity=0.121 Sum_probs=67.6
Q ss_pred CCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCC------CChhhH--------------------------
Q 009310 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT------GTPGNR-------------------------- 291 (538)
Q Consensus 244 ~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~------~~~~~~-------------------------- 291 (538)
..+|+|||||++|+.+|..|++.+.+ |+++++.+..... +.+...
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~---v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 81 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVD---VDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDAL 81 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETT
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCC---EEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecC
Confidence 45899999999999999999987655 9999987654221 111111
Q ss_pred -----------------HHHHHHHHh--CCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccc
Q 009310 292 -----------------EAALKVLSA--RKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAI 352 (538)
Q Consensus 292 -----------------~~~~~~l~~--~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 352 (538)
..+.+.|.+ .|++++.+++|+++..++ +++++.+.
T Consensus 82 ~g~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~-----------------------~~v~v~~~--- 135 (397)
T 2vou_A 82 TGERVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDS-----------------------ETVQMRFS--- 135 (397)
T ss_dssp TCCEEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECS-----------------------SCEEEEET---
T ss_pred CCCccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecC-----------------------CEEEEEEC---
Confidence 112222222 267777777777776544 55666653
Q ss_pred cCCcceEEeccEEEEecCCCCC
Q 009310 353 KGLESQIFEADLVLWTVGSKPL 374 (538)
Q Consensus 353 ~~~~g~~l~~D~vI~a~G~~p~ 374 (538)
+|+++.+|+||.|.|....
T Consensus 136 ---~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 136 ---DGTKAEANWVIGADGGASV 154 (397)
T ss_dssp ---TSCEEEESEEEECCCTTCH
T ss_pred ---CCCEEECCEEEECCCcchh
Confidence 5678999999999998654
No 245
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.79 E-value=0.00011 Score=72.80 Aligned_cols=34 Identities=18% Similarity=0.407 Sum_probs=29.7
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCc
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT 281 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~ 281 (538)
.+|+|||||++|+.+|..|++.+.+ |+++++.+.
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~---V~vlE~~~~ 36 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQ---VHLFDKSRG 36 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCc---EEEEECCCC
Confidence 4799999999999999999987665 999998754
No 246
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.79 E-value=4.2e-05 Score=80.43 Aligned_cols=101 Identities=18% Similarity=0.178 Sum_probs=70.6
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (538)
..++++|||||+.|+.+|..|++ .|.+|+++++...+ .. . ..++...+.+.+++.+++++.+
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~l----------~~-~-d~~~~~~l~~~l~~~Gv~i~~~ 247 (483)
T 3dgh_A 186 EPGKTLVVGAGYIGLECAGFLKG------LGYEPTVMVRSIVL----------RG-F-DQQMAELVAASMEERGIPFLRK 247 (483)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSCSS----------TT-S-CHHHHHHHHHHHHHTTCCEEET
T ss_pred cCCcEEEECCCHHHHHHHHHHHH------cCCEEEEEeCCCCC----------cc-c-CHHHHHHHHHHHHhCCCEEEeC
Confidence 35789999999999999999998 57799999985321 11 1 1233445566777889999985
Q ss_pred -eEEEEcCCCCcCcCCCceeecccEEEcCCc-----eEEEeeEEEEeCCCCCCCC
Q 009310 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLESG-----LIVEYDWLVLSLGAEPKLD 206 (538)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g-----~~~~yD~lVlAtG~~~~~p 206 (538)
.++.+.....- . ..+.+.++ ..+.+|.||+|+|..|+..
T Consensus 248 ~~v~~i~~~~~~-----~-----~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~ 292 (483)
T 3dgh_A 248 TVPLSVEKQDDG-----K-----LLVKYKNVETGEESEDVYDTVLWAIGRKGLVD 292 (483)
T ss_dssp EEEEEEEECTTS-----C-----EEEEEEETTTCCEEEEEESEEEECSCEEECCG
T ss_pred CEEEEEEEcCCC-----c-----EEEEEecCCCCceeEEEcCEEEECcccccCcC
Confidence 78888643210 0 02443332 3789999999999887654
No 247
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.79 E-value=8.4e-05 Score=73.11 Aligned_cols=99 Identities=14% Similarity=0.130 Sum_probs=69.6
Q ss_pred eEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCc---cC--------CCC----ChhhHHHHHHHHHhCCCEEEcCce
Q 009310 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT---IC--------PTG----TPGNREAALKVLSARKVQLVLGYF 310 (538)
Q Consensus 246 ~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~---~l--------~~~----~~~~~~~~~~~l~~~gV~v~~~~~ 310 (538)
.|+|||+|+.|+.+|..+++.+.+ |+++++... ++ |.+ .+++.........+.++.+..+..
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g~~---V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRANLK---TVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDI 84 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCC---EEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccceee
Confidence 699999999999999999887765 999997421 10 111 134555566677788888887766
Q ss_pred eeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCC
Q 009310 311 VRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHV 378 (538)
Q Consensus 311 V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l 378 (538)
+....... ...+. .+++++.+|.+|+|||.+|..+.+
T Consensus 85 ~~~~~~~~------------------------~~~~~-------~~~~~~~~d~liiAtGs~~~~~~i 121 (312)
T 4gcm_A 85 KSVEDKGE------------------------YKVIN-------FGNKELTAKAVIIATGAEYKKIGV 121 (312)
T ss_dssp CEEEECSS------------------------CEEEE-------CSSCEEEEEEEEECCCEEECCCCC
T ss_pred eeeeeeec------------------------ceeec-------cCCeEEEeceeEEcccCccCcCCC
Confidence 65554422 12222 267889999999999998875433
No 248
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.77 E-value=3.1e-05 Score=84.35 Aligned_cols=37 Identities=27% Similarity=0.394 Sum_probs=31.6
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
...+|+|||||++||++|..|++. .|++|+|||+.+.
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~-----~G~~V~viEr~~~ 67 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAF-----PDIRTCIVEQKEG 67 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTC-----TTSCEEEECSSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHHHh-----CCCCEEEEeCCCC
Confidence 347999999999999999999871 3679999999764
No 249
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.77 E-value=5.6e-05 Score=75.07 Aligned_cols=195 Identities=12% Similarity=0.035 Sum_probs=102.6
Q ss_pred CeEEEECCChhHHHHHHHHHHH--HHhcCcEEEEecCCccCCC---------------------------C---------
Q 009310 245 IRVAVVGCGYSGVELAATVSER--LEEKGIVQAINVETTICPT---------------------------G--------- 286 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~--~~~~~~Vtlv~~~~~~l~~---------------------------~--------- 286 (538)
..|+|||+|+.|+.+|..|++. +.+ |+++++...+... +
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~~G~~---V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~ 156 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLRPDLR---ITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVV 156 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTSC---EEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEE
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCE---EEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEE
Confidence 4799999999999999999887 544 9999987543200 0
Q ss_pred --ChhhHHHHHHHHHh-CCCEEEcCceeeEEecccccc--ccccCCCCCcccccccccCCCceEEeecc--ccc----CC
Q 009310 287 --TPGNREAALKVLSA-RKVQLVLGYFVRCIRRVGEFE--ASVKQPESGAIPNIAADKNSDKYILELQP--AIK----GL 355 (538)
Q Consensus 287 --~~~~~~~~~~~l~~-~gV~v~~~~~V~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~----~~ 355 (538)
...+.+.+.+.+.+ .|++++.++.+.++..+++.. ......+..... ......+|.+.... ... ..
T Consensus 157 ~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~---g~~rV~GVv~~~~~v~~~g~~~~~~ 233 (344)
T 3jsk_A 157 KHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDE---AKVRIAGVVTNWTLVSMHHDDQSAM 233 (344)
T ss_dssp SCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC-------------------CCEEEEEEEEEEHHHHTTSSSSSCC
T ss_pred ecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccC---CCceEeEEEeeeeeeeccCCccccc
Confidence 01122444555666 599999999998886543100 000000000000 00000233332110 000 11
Q ss_pred cceEEeccEEEEecCCCCCC-CCCCCCCCccCCCCcCCCCC----------eeeCCCcccCCCCCEEEccccccccCCCC
Q 009310 356 ESQIFEADLVLWTVGSKPLL-PHVEPPNNRLHDLPLNARGQ----------AETDETLCVKGHPRIFALGDSSALRDSSG 424 (538)
Q Consensus 356 ~g~~l~~D~vI~a~G~~p~~-~~l~~~~~~~~~~~l~~~G~----------i~vd~~l~~~~~~~VfaiGD~~~~~~~~~ 424 (538)
+..++.++.||.|+|..... .++..- +...++...-.|. ..|+.+-++ +|++|+.|-.++..+ |
T Consensus 234 d~~~i~Ak~VV~ATG~~s~v~~~~~~~-l~~~~~~~~~~g~~~~~~~~~e~~~v~~t~~v--~~gl~~~gm~~~~~~--g 308 (344)
T 3jsk_A 234 DPNTINAPVIISTTGHDGPFGAFSVKR-LVSMKQMERLNGMRGLDMQSAEDAIVNNTREI--VPGLIVGGMELSEID--G 308 (344)
T ss_dssp BCEEEECSEEEECCCSSSSSSCHHHHH-HHHTTSSSCCCCCEEECHHHHHHHHHHTCEEE--ETTEEECGGGHHHHH--T
T ss_pred CceEEEcCEEEECCCCCchhhHHHHHH-HhhcCcccccCCCcccccccchhhhcccCceE--cCCEEEechhhHhhc--C
Confidence 45789999999999987541 110000 0000111000111 122222232 799999999987543 2
Q ss_pred CCC-CccHHHHHHHHHHHHHHHHHHHC
Q 009310 425 RPL-PATAQVAFQQADFAGWNLWAAIN 450 (538)
Q Consensus 425 ~~~-~~~~~~A~~qg~~aa~~i~~~l~ 450 (538)
.+. .+..-.=...|+.+|..|...+.
T Consensus 309 ~~rmgp~fg~m~~sg~~~a~~~~~~~~ 335 (344)
T 3jsk_A 309 ANRMGPTFGAMALSGVKAAHEAIRVFD 335 (344)
T ss_dssp CEECCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcccceeeecCHHHHHHHHHHHH
Confidence 222 22333335789999999887764
No 250
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.76 E-value=2.8e-05 Score=81.04 Aligned_cols=66 Identities=21% Similarity=0.220 Sum_probs=53.5
Q ss_pred CCCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCcc-------CCC--CChhhHHHHHHHHHhCCCEEEcCcee
Q 009310 243 SLIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTI-------CPT--GTPGNREAALKVLSARKVQLVLGYFV 311 (538)
Q Consensus 243 ~~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~-------l~~--~~~~~~~~~~~~l~~~gV~v~~~~~V 311 (538)
..++|+|||+|+.|+.+|..|++.+.+ |+++++.+.+ .+. ++..+.+...+.+++.||++++++.|
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~---V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v 195 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYE---VHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEV 195 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCC---EEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHTTCEEETTCCB
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCe---EEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCcEEEeCCEe
Confidence 357899999999999999999988765 9999997765 232 24556667778899999999999765
No 251
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.76 E-value=1.3e-05 Score=84.82 Aligned_cols=42 Identities=26% Similarity=0.327 Sum_probs=36.1
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCc
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP 124 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p 124 (538)
+..||||||||++||+||.+|++. .|++|+|+|++++.+...
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~-----~G~~V~VlE~~~~~GG~~ 50 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQI-----DGPSWMIVDSNETPGGLA 50 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHH-----CCSCEEEEESSSSCCGGG
T ss_pred CCCCEEEECCcHHHHHHHHHHHhh-----CCCCEEEEECCCCCcCCe
Confidence 458999999999999999999873 488999999999866543
No 252
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.74 E-value=5e-05 Score=79.48 Aligned_cols=99 Identities=17% Similarity=0.226 Sum_probs=67.1
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (538)
..++|+|||||+.|+.+|..|++ .|.+|+++++.+.+. . .....++...+.+.++ ++++.+
T Consensus 171 ~~~~vvViGgG~~g~e~A~~l~~------~g~~Vtlv~~~~~~l---------~-~~~d~~~~~~l~~~l~---v~i~~~ 231 (466)
T 3l8k_A 171 LPQDMVIIGAGYIGLEIASIFRL------MGVQTHIIEMLDRAL---------I-TLEDQDIVNTLLSILK---LNIKFN 231 (466)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSC---------T-TSCCHHHHHHHHHHHC---CCEECS
T ss_pred CCCeEEEECCCHHHHHHHHHHHH------cCCEEEEEEeCCcCC---------C-CCCCHHHHHHHHhcCE---EEEEEC
Confidence 35799999999999999999998 577999999987631 1 1101222333344443 777764
Q ss_pred -eEEEEcCCC-CcCcCCCceeecccEEEcC--Cce--EEEeeEEEEeCCCCCCCC
Q 009310 158 -RVKLLCPSD-HLGVNGPMACTHGGTVLLE--SGL--IVEYDWLVLSLGAEPKLD 206 (538)
Q Consensus 158 -~v~~i~~~~-~~~~~~~~~~~~~~~v~~~--~g~--~~~yD~lVlAtG~~~~~p 206 (538)
.++++.... .. ..+.++ +|. .+.+|.||+|+|..|+..
T Consensus 232 ~~v~~i~~~~~~~-----------v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~ 275 (466)
T 3l8k_A 232 SPVTEVKKIKDDE-----------YEVIYSTKDGSKKSIFTNSVVLAAGRRPVIP 275 (466)
T ss_dssp CCEEEEEEEETTE-----------EEEEECCTTSCCEEEEESCEEECCCEEECCC
T ss_pred CEEEEEEEcCCCc-----------EEEEEEecCCceEEEEcCEEEECcCCCcccc
Confidence 677775432 10 134454 454 799999999999988765
No 253
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.74 E-value=6.4e-05 Score=82.66 Aligned_cols=98 Identities=18% Similarity=0.117 Sum_probs=71.5
Q ss_pred CCCeEEEEC--CcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEE
Q 009310 78 KKPRICILG--GGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFF 155 (538)
Q Consensus 78 ~~~~VVIIG--gG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 155 (538)
..++|+||| ||+.|+.+|..|++ .|.+|+++++.+.+. ...........+.+.+++.+|+++
T Consensus 522 ~g~~VvViG~ggG~~g~e~A~~L~~------~g~~Vtlv~~~~~l~----------~~~~~~~~~~~l~~~l~~~GV~i~ 585 (690)
T 3k30_A 522 DGKKVVVYDDDHYYLGGVVAELLAQ------KGYEVSIVTPGAQVS----------SWTNNTFEVNRIQRRLIENGVARV 585 (690)
T ss_dssp SSSEEEEEECSCSSHHHHHHHHHHH------TTCEEEEEESSSSTT----------GGGGGGTCHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEEcCCCCccHHHHHHHHHh------CCCeeEEEecccccc----------cccccchhHHHHHHHHHHCCCEEE
Confidence 346799999 99999999999998 577999999887521 111112223455667778899999
Q ss_pred Ee-eEEEEcCCCCcCcCCCceeecccEEE---cCCceEEEeeEEEEeCCCCCC
Q 009310 156 KD-RVKLLCPSDHLGVNGPMACTHGGTVL---LESGLIVEYDWLVLSLGAEPK 204 (538)
Q Consensus 156 ~~-~v~~i~~~~~~~~~~~~~~~~~~~v~---~~~g~~~~yD~lVlAtG~~~~ 204 (538)
.+ +|++++.+.. .+. ..++..+.+|.||+|+|..|+
T Consensus 586 ~~~~V~~i~~~~~-------------~v~~~~~~~~~~i~aD~VV~A~G~~p~ 625 (690)
T 3k30_A 586 TDHAVVAVGAGGV-------------TVRDTYASIERELECDAVVMVTARLPR 625 (690)
T ss_dssp ESEEEEEEETTEE-------------EEEETTTCCEEEEECSEEEEESCEEEC
T ss_pred cCcEEEEEECCeE-------------EEEEccCCeEEEEECCEEEECCCCCCC
Confidence 86 8888875432 222 235668999999999998864
No 254
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.74 E-value=2.4e-05 Score=80.70 Aligned_cols=41 Identities=27% Similarity=0.408 Sum_probs=35.8
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCC-CEEEEEcCCCCcccCc
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKK-PQVLLVDQSERFVFKP 124 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g-~~V~lie~~~~~~~~p 124 (538)
+++||+|||||++||+||..|++ .| ++|+|+|++++.+...
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~------~g~~~v~v~E~~~~~GG~~ 46 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQ------AGFHDYTILERTDHVGGKC 46 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHH------TTCCCEEEECSSSCSSTTC
T ss_pred CCCCEEEECcCHHHHHHHHHHHh------CCCCcEEEEECCCCCCCcc
Confidence 45799999999999999999998 67 8999999998765543
No 255
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.72 E-value=2e-05 Score=81.64 Aligned_cols=37 Identities=30% Similarity=0.404 Sum_probs=31.4
Q ss_pred CCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 76 DKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 76 ~~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
..++++|+|||||++|+++|..|++ .|++|+|||+.+
T Consensus 19 ~~m~~~ViIVGaGpaGl~~A~~La~------~G~~V~viE~~~ 55 (430)
T 3ihm_A 19 SHMKKRIGIVGAGTAGLHLGLFLRQ------HDVDVTVYTDRK 55 (430)
T ss_dssp ----CEEEEECCHHHHHHHHHHHHH------TTCEEEEEESCC
T ss_pred CcCCCCEEEECCcHHHHHHHHHHHH------CCCeEEEEcCCC
Confidence 3456899999999999999999999 788999999976
No 256
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.72 E-value=6.8e-05 Score=78.94 Aligned_cols=101 Identities=17% Similarity=0.192 Sum_probs=69.8
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (538)
..++|+|||||+.|+.+|..|++ .|.+|+++++...+ .. . ..++...+.+.+++.+++++.+
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~------~g~~Vtlv~~~~~l----------~~-~-d~~~~~~l~~~l~~~gv~~~~~ 245 (488)
T 3dgz_A 184 SPGKTLVVGASYVALECAGFLTG------IGLDTTVMMRSIPL----------RG-F-DQQMSSLVTEHMESHGTQFLKG 245 (488)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHH------TTCCEEEEESSCSS----------TT-S-CHHHHHHHHHHHHHTTCEEEET
T ss_pred cCCeEEEECCCHHHHHHHHHHHH------cCCceEEEEcCccc----------cc-C-CHHHHHHHHHHHHHCCCEEEeC
Confidence 34689999999999999999998 57799999986421 10 1 1233445666777889999885
Q ss_pred -eEEEEcCCCCcCcCCCceeecccEEEcC---Cce--EEEeeEEEEeCCCCCCCC
Q 009310 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLE---SGL--IVEYDWLVLSLGAEPKLD 206 (538)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~~~---~g~--~~~yD~lVlAtG~~~~~p 206 (538)
.+..+.....- . ..+.+. +++ .+.+|.||+|+|..|+..
T Consensus 246 ~~v~~i~~~~~~-----~-----~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~ 290 (488)
T 3dgz_A 246 CVPSHIKKLPTN-----Q-----LQVTWEDHASGKEDTGTFDTVLWAIGRVPETR 290 (488)
T ss_dssp EEEEEEEECTTS-----C-----EEEEEEETTTTEEEEEEESEEEECSCEEESCG
T ss_pred CEEEEEEEcCCC-----c-----EEEEEEeCCCCeeEEEECCEEEEcccCCcccC
Confidence 77777542110 0 023332 244 578999999999887654
No 257
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.70 E-value=0.00015 Score=75.48 Aligned_cols=97 Identities=23% Similarity=0.226 Sum_probs=70.3
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCC-----------------------CC---------------
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICP-----------------------TG--------------- 286 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~-----------------------~~--------------- 286 (538)
..|+|||||++|+-+|..+++.+.+ |+++++.+.+.. .+
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~---V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGAN---VLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFN 103 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCC---EEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcC
Confidence 4799999999999999999887654 999998653210 00
Q ss_pred -----------------------------ChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCccccccc
Q 009310 287 -----------------------------TPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAA 337 (538)
Q Consensus 287 -----------------------------~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~ 337 (538)
...+.+.+.+.+++.||++++++.|+++..++
T Consensus 104 ~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~------------------- 164 (447)
T 2i0z_A 104 NEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYEN------------------- 164 (447)
T ss_dssp HHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-------------------
T ss_pred HHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecC-------------------
Confidence 01222345566778899999999999997543
Q ss_pred ccCCCc-eEEeecccccCCcceEEeccEEEEecCCCC
Q 009310 338 DKNSDK-YILELQPAIKGLESQIFEADLVLWTVGSKP 373 (538)
Q Consensus 338 ~~~~~~-v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p 373 (538)
+. +.+.+. +|+.+.+|.||+|+|..+
T Consensus 165 ----~~v~~V~~~------~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 165 ----GQTKAVILQ------TGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp ----TEEEEEEET------TCCEEECSCEEECCCCSS
T ss_pred ----CcEEEEEEC------CCCEEECCEEEECCCCCc
Confidence 23 334432 456799999999999876
No 258
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.70 E-value=2.9e-05 Score=81.28 Aligned_cols=40 Identities=33% Similarity=0.457 Sum_probs=35.3
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCC--EEEEEcCCCCcccCc
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP--QVLLVDQSERFVFKP 124 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~--~V~lie~~~~~~~~p 124 (538)
++||+|||||++||+||++|++ .|+ +|+|+|+++......
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~------~G~~~~V~vlEa~~~~GG~~ 43 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSR------APCPPKVVLVESSERLGGWI 43 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHT------SSSCCEEEEECSSSSSBTTC
T ss_pred CceEEEECCcHHHHHHHHHHHh------CCCCCcEEEEeCCCCCCCce
Confidence 4799999999999999999998 678 999999998765544
No 259
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.69 E-value=0.00026 Score=72.02 Aligned_cols=99 Identities=12% Similarity=0.106 Sum_probs=70.8
Q ss_pred eEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCcc------CCC--------------C-------------------
Q 009310 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTI------CPT--------------G------------------- 286 (538)
Q Consensus 246 ~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~------l~~--------------~------------------- 286 (538)
+|+|||||++|+-+|..|++.+.+ |+++++.+.. ... .
T Consensus 4 dV~IvGaG~aGl~~A~~L~~~G~~---v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 80 (394)
T 1k0i_A 4 QVAIIGAGPSGLLLGQLLHKAGID---NVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFA 80 (394)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCC---EEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEET
T ss_pred cEEEECCCHHHHHHHHHHHHCCCC---EEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEEC
Confidence 799999999999999999988765 9999986531 000 0
Q ss_pred --------------------C-hhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceE
Q 009310 287 --------------------T-PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYI 345 (538)
Q Consensus 287 --------------------~-~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 345 (538)
+ ..+.+.+.+.+.+.|++++.+++|+++..+++ +.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~----------------------~~~~ 138 (394)
T 1k0i_A 81 GQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQG----------------------ERPY 138 (394)
T ss_dssp TEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTS----------------------SSCE
T ss_pred CceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecC----------------------CceE
Confidence 0 12234455566778999999999999986421 2344
Q ss_pred EeecccccCCcce--EEeccEEEEecCCCCC
Q 009310 346 LELQPAIKGLESQ--IFEADLVLWTVGSKPL 374 (538)
Q Consensus 346 ~~~~~~~~~~~g~--~l~~D~vI~a~G~~p~ 374 (538)
+.+. .+|+ ++.+|+||.|.|....
T Consensus 139 v~~~-----~~g~~~~~~a~~vV~AdG~~S~ 164 (394)
T 1k0i_A 139 VTFE-----RDGERLRLDCDYIAGCDGFHGI 164 (394)
T ss_dssp EEEE-----ETTEEEEEECSEEEECCCTTCS
T ss_pred EEEe-----cCCcEEEEEeCEEEECCCCCcH
Confidence 4431 0455 7999999999998765
No 260
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.66 E-value=4.7e-05 Score=76.97 Aligned_cols=41 Identities=24% Similarity=0.340 Sum_probs=35.7
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCC-CCcccC
Q 009310 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQS-ERFVFK 123 (538)
Q Consensus 77 ~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~-~~~~~~ 123 (538)
...++|+|||||++||+||..|++ .|++|+|+|++ +..+..
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~------~G~~V~VlE~~~~~vGGr 83 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTR------AGHDVTILEANANRVGGR 83 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHH------TSCEEEEECSCSSCCBTT
T ss_pred CCCceEEEECCCHHHHHHHHHHHH------CCCcEEEEeccccccCCc
Confidence 456899999999999999999999 68899999999 765543
No 261
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.65 E-value=0.00022 Score=69.96 Aligned_cols=100 Identities=11% Similarity=0.009 Sum_probs=69.6
Q ss_pred eEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCc----c------------CCCCC-----hhhHHHHHHHHHhCCCE
Q 009310 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT----I------------CPTGT-----PGNREAALKVLSARKVQ 304 (538)
Q Consensus 246 ~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~----~------------l~~~~-----~~~~~~~~~~l~~~gV~ 304 (538)
.|+|||+|+.|+.+|..+++.+.+ |+++++... + .+.++ +++.+...+.+++.+++
T Consensus 6 DvvIIG~GpAGl~AA~~la~~g~~---v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~ 82 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGRSSLK---PVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTT 82 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC---CEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCE
T ss_pred cEEEECCCHHHHHHHHHHHHCCCC---EEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcE
Confidence 799999999999999999887765 999987531 0 01121 34556677788889999
Q ss_pred EEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCCCC
Q 009310 305 LVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLPHV 378 (538)
Q Consensus 305 v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~~l 378 (538)
+.... +..+.... +...+.. .++.++.+|.+|+|||.+|..+.+
T Consensus 83 ~~~~~-v~~~~~~~-----------------------~~~~~~~------~~~~~~~~~~liiATG~~~~~~~i 126 (314)
T 4a5l_A 83 IITET-IDHVDFST-----------------------QPFKLFT------EEGKEVLTKSVIIATGATAKRMHV 126 (314)
T ss_dssp EECCC-EEEEECSS-----------------------SSEEEEE------TTCCEEEEEEEEECCCEEECCCCC
T ss_pred EEEeE-EEEeecCC-----------------------CceEEEE------CCCeEEEEeEEEEcccccccccCC
Confidence 88765 33333322 2233322 267889999999999998875443
No 262
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.63 E-value=0.00012 Score=77.77 Aligned_cols=107 Identities=12% Similarity=0.117 Sum_probs=67.7
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD 157 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (538)
..++|+|||||+.|+.+|..|++ .|.+|+++++...+ . .. ..++...+.+.+++.+|+++.+
T Consensus 209 ~~~~vvVIGgG~ig~E~A~~l~~------~G~~Vtlv~~~~~l----------~-~~-d~~~~~~~~~~l~~~GV~v~~~ 270 (519)
T 3qfa_A 209 CPGKTLVVGASYVALECAGFLAG------IGLDVTVMVRSILL----------R-GF-DQDMANKIGEHMEEHGIKFIRQ 270 (519)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHH------TTCCEEEEESSCSS----------T-TS-CHHHHHHHHHHHHHTTCEEEES
T ss_pred cCCeEEEECCcHHHHHHHHHHHH------cCCeEEEEeccccc----------c-cC-CHHHHHHHHHHHHHCCCEEEeC
Confidence 34689999999999999999998 57799999985221 1 11 1334445566777889999875
Q ss_pred -eEEEEcCCCCcCcCCCceeecccEEEcCCc---eEEEeeEEEEeCCCCCCCCC
Q 009310 158 -RVKLLCPSDHLGVNGPMACTHGGTVLLESG---LIVEYDWLVLSLGAEPKLDV 207 (538)
Q Consensus 158 -~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g---~~~~yD~lVlAtG~~~~~p~ 207 (538)
.++.+...... ....+. ..+...++ ..+.+|.||+|+|..|+...
T Consensus 271 ~~v~~v~~~~~~--~~~~~~---v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~ 319 (519)
T 3qfa_A 271 FVPIKVEQIEAG--TPGRLR---VVAQSTNSEEIIEGEYNTVMLAIGRDACTRK 319 (519)
T ss_dssp EEEEEEEEEECC--TTCEEE---EEEEESSSSCEEEEEESEEEECSCEEESCSS
T ss_pred CeEEEEEEccCC--CCceEE---EEEEECCCcEEEEEECCEEEEecCCcccCCC
Confidence 45555321100 000000 01222333 35789999999998876543
No 263
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=97.63 E-value=0.00019 Score=72.54 Aligned_cols=32 Identities=16% Similarity=0.253 Sum_probs=28.2
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecC
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVE 279 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~ 279 (538)
.+|+|||||.+|+-+|..|++.+.+ |+++++.
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~~G~~---V~llE~~ 49 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAKENKN---TALFESG 49 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCc---EEEEeCC
Confidence 4899999999999999999987655 9999874
No 264
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.61 E-value=3.9e-05 Score=80.39 Aligned_cols=45 Identities=27% Similarity=0.449 Sum_probs=35.2
Q ss_pred CCCCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCc
Q 009310 74 WPDKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP 124 (538)
Q Consensus 74 ~~~~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p 124 (538)
+|....+||+|||||++||+||..|++ .|++|+|+|+++..+...
T Consensus 11 ~~~~~~~~v~iiG~G~~Gl~aa~~l~~------~g~~v~v~E~~~~~GGr~ 55 (478)
T 2ivd_A 11 MPRTTGMNVAVVGGGISGLAVAHHLRS------RGTDAVLLESSARLGGAV 55 (478)
T ss_dssp ------CCEEEECCBHHHHHHHHHHHT------TTCCEEEECSSSSSBTTC
T ss_pred CCCCCCCcEEEECCCHHHHHHHHHHHH------CCCCEEEEEcCCCCCcee
Confidence 566677899999999999999999998 688999999998865543
No 265
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.61 E-value=2.8e-05 Score=82.53 Aligned_cols=41 Identities=24% Similarity=0.427 Sum_probs=35.8
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCC-CEEEEEcCCCCcccCc
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKK-PQVLLVDQSERFVFKP 124 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g-~~V~lie~~~~~~~~p 124 (538)
+.++|+|||||+|||+||..|++ .| ++|+|+|++++.+...
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~------~G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQ------NGIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHH------TTCCSEEEECSSSSSBTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHh------cCCCCEEEEeCCCCCCCce
Confidence 34799999999999999999998 67 8999999999865543
No 266
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=97.61 E-value=0.00019 Score=73.64 Aligned_cols=99 Identities=15% Similarity=0.147 Sum_probs=69.0
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccC----CCCC---------------------------------
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTIC----PTGT--------------------------------- 287 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l----~~~~--------------------------------- 287 (538)
.+|+|||||++|+-+|..|++.+.+ |+++++.+..- ..+.
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~---V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 82 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFK---VKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGK 82 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCC---EEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETT
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCC---EEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCC
Confidence 3899999999999999999887655 99999864110 0000
Q ss_pred -----------------------hhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCce
Q 009310 288 -----------------------PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKY 344 (538)
Q Consensus 288 -----------------------~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 344 (538)
..+...+.+.+++.|++++.++.|+++..++ +++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~-----------------------~~~ 139 (421)
T 3nix_A 83 EIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFG-----------------------TDS 139 (421)
T ss_dssp EEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEET-----------------------TEE
T ss_pred eeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC-----------------------CEE
Confidence 1223445566677799999999999998654 333
Q ss_pred EEeecccccCCcce--EEeccEEEEecCCCC
Q 009310 345 ILELQPAIKGLESQ--IFEADLVLWTVGSKP 373 (538)
Q Consensus 345 ~~~~~~~~~~~~g~--~l~~D~vI~a~G~~p 373 (538)
.+.+. . .+|+ ++.+|.||.|+|...
T Consensus 140 ~v~v~---~-~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 140 VTTIE---D-INGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp EEEEE---E-TTSCEEEEEEEEEEECCGGGC
T ss_pred EEEEE---c-CCCCEEEEEcCEEEECCCCch
Confidence 22221 1 1455 799999999999764
No 267
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.60 E-value=8.4e-05 Score=78.43 Aligned_cols=103 Identities=22% Similarity=0.281 Sum_probs=70.6
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCC--------CCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCC
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQD--------DKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTG 151 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~--------~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~ 151 (538)
.+++|||||+.|+++|..|++++... ..+.+|+|||..+.. -... .+.+.....+.+++.+
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~i----------l~~~-~~~~~~~~~~~L~~~G 286 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIV----------LNMF-EKKLSSYAQSHLENTS 286 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSS----------STTS-CHHHHHHHHHHHHHTT
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEecccccc----------ccCC-CHHHHHHHHHHHHhcc
Confidence 47999999999999999887542100 023689999998863 1111 1334445667778889
Q ss_pred cEEEEe-eEEEEcCCCCcCcCCCceeecccEEEcCCc----eEEEeeEEEEeCCCCCC
Q 009310 152 VQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESG----LIVEYDWLVLSLGAEPK 204 (538)
Q Consensus 152 v~~~~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g----~~~~yD~lVlAtG~~~~ 204 (538)
|+++.+ .|+.++.+... .....++| +++++|.||.|+|..|+
T Consensus 287 V~v~~~~~v~~v~~~~~~-----------~~~~~~dg~~~~~~i~ad~viwa~Gv~~~ 333 (502)
T 4g6h_A 287 IKVHLRTAVAKVEEKQLL-----------AKTKHEDGKITEETIPYGTLIWATGNKAR 333 (502)
T ss_dssp CEEETTEEEEEECSSEEE-----------EEEECTTSCEEEEEEECSEEEECCCEECC
T ss_pred eeeecCceEEEEeCCceE-----------EEEEecCcccceeeeccCEEEEccCCcCC
Confidence 999975 88888765431 02233444 36999999999998764
No 268
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.59 E-value=0.00033 Score=75.13 Aligned_cols=34 Identities=21% Similarity=0.284 Sum_probs=29.7
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCc
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT 281 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~ 281 (538)
-.|+|||+|..|+.+|..+++.+.+ |+++++.+.
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~G~~---V~vlEk~~~ 155 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKAGAN---VILVDKAPF 155 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCC---EEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCc---EEEEeCCCC
Confidence 3799999999999999999988765 999998653
No 269
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.59 E-value=7.2e-05 Score=78.68 Aligned_cols=41 Identities=27% Similarity=0.405 Sum_probs=35.9
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC
Q 009310 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK 123 (538)
Q Consensus 77 ~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~ 123 (538)
.+.++|+|||||+|||+||..|++ .|++|+|+|+++..+..
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~------~g~~v~v~E~~~~~GG~ 49 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQK------AGYKVTVLEARTRPGGR 49 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSCTT
T ss_pred cCCCCEEEECCCHHHHHHHHHHHH------CCCCEEEEeccCCCCCc
Confidence 446799999999999999999998 68899999999876544
No 270
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.57 E-value=6e-05 Score=78.67 Aligned_cols=67 Identities=13% Similarity=0.099 Sum_probs=51.6
Q ss_pred CCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccC--------CCC--ChhhHHHHHHHHHhCCCEEEcCcee
Q 009310 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTIC--------PTG--TPGNREAALKVLSARKVQLVLGYFV 311 (538)
Q Consensus 244 ~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l--------~~~--~~~~~~~~~~~l~~~gV~v~~~~~V 311 (538)
.++|+|||+|+.|+.+|..|.+.+.+ ..|+++++.+.+. +.+ ...+...+.+.+++.||+++.++.+
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~-~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 82 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSR-AHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEV 82 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSS-CEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCB
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCC-CCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeEE
Confidence 57999999999999999999887621 2399999987664 322 1345566777888899999988765
No 271
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.55 E-value=4.6e-05 Score=78.03 Aligned_cols=42 Identities=21% Similarity=0.339 Sum_probs=35.6
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCc
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP 124 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p 124 (538)
..+||+|||||++||+||..|++. .|++|+|+|++++.+...
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~-----~g~~v~v~E~~~~~GG~~ 47 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQ-----LDKRVLVLERRPHIGGNA 47 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHH-----SCCCEEEECSSSSSSGGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHh-----CCCCEEEEeCCCCCCCee
Confidence 358999999999999999999982 278999999998765543
No 272
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.55 E-value=3.2e-05 Score=80.70 Aligned_cols=45 Identities=31% Similarity=0.448 Sum_probs=35.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK 123 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~ 123 (538)
++||+|||||++||+||++|++.+....++++|+|+|+++..+..
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~ 49 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGK 49 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCce
Confidence 479999999999999999999954111123899999999876543
No 273
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.55 E-value=5.6e-05 Score=78.80 Aligned_cols=41 Identities=17% Similarity=0.233 Sum_probs=36.3
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCc
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP 124 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p 124 (538)
..+||||||||++||+||..|++ .|++|+|+|++++.+...
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~------~G~~V~vlE~~~~~GG~~ 50 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSV------DGKKVLHIDKQDHYGGEA 50 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCGGG
T ss_pred ccCCEEEECcCHHHHHHHHHHHH------CCCeEEEEeCCCCCCccc
Confidence 45799999999999999999999 788999999999866543
No 274
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.53 E-value=0.00015 Score=72.27 Aligned_cols=32 Identities=22% Similarity=0.248 Sum_probs=27.4
Q ss_pred eEEEECCChhHHHHHHHHHH---HHHhcCcEEEEecCC
Q 009310 246 RVAVVGCGYSGVELAATVSE---RLEEKGIVQAINVET 280 (538)
Q Consensus 246 ~VvVVGgG~~g~E~A~~l~~---~~~~~~~Vtlv~~~~ 280 (538)
+|+|||+|.+|+-+|..|++ .+.+ |+++++.+
T Consensus 3 dV~IIGaG~aGl~~A~~L~~~~~~G~~---V~v~Ek~~ 37 (342)
T 3qj4_A 3 QVLIVGAGMTGSLCAALLRRQTSGPLY---LAVWDKAD 37 (342)
T ss_dssp EEEEECCSHHHHHHHHHHHSCC-CCEE---EEEECSSS
T ss_pred cEEEECCcHHHHHHHHHHHhhccCCce---EEEEECCC
Confidence 79999999999999999987 5444 99998764
No 275
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=97.51 E-value=0.00042 Score=70.03 Aligned_cols=100 Identities=13% Similarity=0.006 Sum_probs=68.9
Q ss_pred eEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCC------C--------------------------------
Q 009310 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTG------T-------------------------------- 287 (538)
Q Consensus 246 ~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~------~-------------------------------- 287 (538)
.|+|||+|++|+-+|..|++.+.+ |+++++.+.+.... .
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~---V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLK---TLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKR 82 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCc---EEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCce
Confidence 599999999999999999998776 99999755432100 0
Q ss_pred -------------------hhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEee
Q 009310 288 -------------------PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILEL 348 (538)
Q Consensus 288 -------------------~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 348 (538)
..+...+.+...+.|++++.++.++.+..+++.. ..+...
T Consensus 83 ~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~--------------------~~v~~~- 141 (397)
T 3oz2_A 83 PIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKV--------------------AGAKIR- 141 (397)
T ss_dssp CEEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEE--------------------EEEEEE-
T ss_pred EeeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeecccee--------------------eeeeec-
Confidence 1123344566677899999999998887654211 122222
Q ss_pred cccccCCcceEEeccEEEEecCCCC
Q 009310 349 QPAIKGLESQIFEADLVLWTVGSKP 373 (538)
Q Consensus 349 ~~~~~~~~g~~l~~D~vI~a~G~~p 373 (538)
.+++..++.+|+||-|.|...
T Consensus 142 ----~~~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 142 ----HNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp ----ETTEEEEEEEEEEEECCCTTC
T ss_pred ----ccccceEEEEeEEEeCCcccc
Confidence 223456789999999999754
No 276
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.51 E-value=7.9e-05 Score=75.03 Aligned_cols=35 Identities=31% Similarity=0.451 Sum_probs=32.1
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
+.+||+|||||++|+++|++|++ +|++|+|||++.
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~------~G~~V~vle~~~ 39 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILAR------KGYSVHILARDL 39 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHh------CCCEEEEEeccC
Confidence 45799999999999999999998 688999999975
No 277
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.50 E-value=0.00055 Score=69.20 Aligned_cols=32 Identities=34% Similarity=0.529 Sum_probs=28.2
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecC
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVE 279 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~ 279 (538)
.+|+|||+|.+|+-+|..|++.+.+ |+++++.
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~~G~~---V~lle~~ 37 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAKRGEE---VTVIEKR 37 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCC---EEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCe---EEEEeCC
Confidence 4799999999999999999987655 9999875
No 278
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.50 E-value=0.00049 Score=72.83 Aligned_cols=101 Identities=18% Similarity=0.088 Sum_probs=70.3
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCC----CC----------------------------------
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICP----TG---------------------------------- 286 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~----~~---------------------------------- 286 (538)
.+|+|||||+.|+-+|..|++.+.+ |+++++.+.... ..
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~---V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~ 84 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHR---VLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWG 84 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCC---EEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCC---EEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEec
Confidence 3899999999999999999876554 999987641000 00
Q ss_pred -------------------------ChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCC
Q 009310 287 -------------------------TPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNS 341 (538)
Q Consensus 287 -------------------------~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (538)
...+...+.+.+++.||+++.+++|+++..+++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v-------------------- 144 (512)
T 3e1t_A 85 KEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERA-------------------- 144 (512)
T ss_dssp SCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEE--------------------
T ss_pred CCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEE--------------------
Confidence 01123445566777899999999999998754210
Q ss_pred CceEEeecccccCCcc--eEEeccEEEEecCCCCC
Q 009310 342 DKYILELQPAIKGLES--QIFEADLVLWTVGSKPL 374 (538)
Q Consensus 342 ~~v~~~~~~~~~~~~g--~~l~~D~vI~a~G~~p~ 374 (538)
.+|++... +| .++.+|+||.|+|....
T Consensus 145 ~gv~~~~~------dG~~~~i~ad~VI~AdG~~S~ 173 (512)
T 3e1t_A 145 VGVRYRNT------EGVELMAHARFIVDASGNRTR 173 (512)
T ss_dssp EEEEEECS------SSCEEEEEEEEEEECCCTTCS
T ss_pred EEEEEEeC------CCCEEEEEcCEEEECCCcchH
Confidence 13445421 44 48999999999999754
No 279
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.49 E-value=0.0004 Score=74.04 Aligned_cols=101 Identities=18% Similarity=0.197 Sum_probs=69.8
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccC--------CC-------------CC----------------
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTIC--------PT-------------GT---------------- 287 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l--------~~-------------~~---------------- 287 (538)
.+|+|||+|++|+.+|..|.+.+.+ |+++++.+.+. +. +.
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~---v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~ 93 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRS---VHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQ 93 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCC---EEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCH
Confidence 3899999999999999999887654 99999865431 10 01
Q ss_pred hhhHHHHHHHHHhCC--CEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEE
Q 009310 288 PGNREAALKVLSARK--VQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLV 365 (538)
Q Consensus 288 ~~~~~~~~~~l~~~g--V~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~v 365 (538)
+++.+++....++.+ +++.++++|.+++.++.. +.+++.+. +|+++.+|.|
T Consensus 94 ~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~---------------------~~w~V~~~------~G~~~~ad~v 146 (542)
T 1w4x_A 94 PEILRYINFVADKFDLRSGITFHTTVTAAAFDEAT---------------------NTWTVDTN------HGDRIRARYL 146 (542)
T ss_dssp HHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTT---------------------TEEEEEET------TCCEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCC---------------------CeEEEEEC------CCCEEEeCEE
Confidence 123344455556655 678999999998764310 23455432 5678999999
Q ss_pred EEecCC--CCCC
Q 009310 366 LWTVGS--KPLL 375 (538)
Q Consensus 366 I~a~G~--~p~~ 375 (538)
|+|+|. +|..
T Consensus 147 V~AtG~~s~p~~ 158 (542)
T 1w4x_A 147 IMASGQLSVPQL 158 (542)
T ss_dssp EECCCSCCCCCC
T ss_pred EECcCCCCCCCC
Confidence 999996 4543
No 280
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.49 E-value=0.00041 Score=70.99 Aligned_cols=35 Identities=14% Similarity=0.301 Sum_probs=30.4
Q ss_pred CCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCc
Q 009310 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT 281 (538)
Q Consensus 244 ~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~ 281 (538)
..+|+|||||++|+-+|..|++.+.+ |+++++.+.
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~G~~---V~v~E~~~~ 57 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQSGID---CDVYEAVKE 57 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCC---EEEEeCCCC
Confidence 45899999999999999999987765 999998654
No 281
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.49 E-value=0.00036 Score=74.86 Aligned_cols=35 Identities=31% Similarity=0.424 Sum_probs=30.0
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCcc
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTI 282 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~ 282 (538)
..|+|||+|..|+.+|..+++.+.+ |+++++.+.+
T Consensus 127 ~DVvVVGaG~aGl~aA~~la~~G~~---V~vlEk~~~~ 161 (571)
T 1y0p_A 127 VDVVVVGSGGAGFSAAISATDSGAK---VILIEKEPVI 161 (571)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCc---EEEEeCCCCC
Confidence 4799999999999999999987765 9999886543
No 282
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.49 E-value=0.00019 Score=77.46 Aligned_cols=105 Identities=20% Similarity=0.267 Sum_probs=65.6
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEEe-
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFKD- 157 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~- 157 (538)
.++|+|||||+.|+.+|..|++ .|.+|+++++...+ + . . ..++...+.+.+++.+++++.+
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~l---~-------~-~-d~~~~~~~~~~l~~~gv~i~~~~ 347 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLAS------LGGDVTVMVRSILL---R-------G-F-DQQMAEKVGDYMENHGVKFAKLC 347 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH------TTCCEEEEESSCSS---T-------T-S-CHHHHHHHHHHHHHTTCEEEETE
T ss_pred CCEEEEECCCHHHHHHHHHHHH------cCCEEEEEECCcCc---C-------c-C-CHHHHHHHHHHHHhCCCEEEECC
Confidence 4689999999999999999998 56799999987211 1 1 1 1223334555667789999875
Q ss_pred eEEEEcCC-----CCcCcCCCceeecccEEEcCCceEE--EeeEEEEeCCCCCCCC
Q 009310 158 RVKLLCPS-----DHLGVNGPMACTHGGTVLLESGLIV--EYDWLVLSLGAEPKLD 206 (538)
Q Consensus 158 ~v~~i~~~-----~~~~~~~~~~~~~~~~v~~~~g~~~--~yD~lVlAtG~~~~~p 206 (538)
.++.+... .. -....+.+ .+...+|..+ .+|.||+|+|..|+..
T Consensus 348 ~v~~v~~~~~~~~~~--~~~~~~~v---~~~~~~g~~~~~~~D~vi~a~G~~p~~~ 398 (598)
T 2x8g_A 348 VPDEIKQLKVVDTEN--NKPGLLLV---KGHYTDGKKFEEEFETVIFAVGREPQLS 398 (598)
T ss_dssp EEEEEEEEECCBTTT--TBCCEEEE---EEEETTSCEEEEEESEEEECSCEEECGG
T ss_pred eEEEEEecccccccc--CCCceEEE---EEEeCCCcEEeccCCEEEEEeCCccccC
Confidence 45555211 00 00000000 1223455554 4999999999887653
No 283
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.49 E-value=7.9e-05 Score=78.53 Aligned_cols=101 Identities=17% Similarity=0.179 Sum_probs=67.6
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCC----------CChhhH---HHHHHHHHhCCCEEEcCcee
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT----------GTPGNR---EAALKVLSARKVQLVLGYFV 311 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~----------~~~~~~---~~~~~~l~~~gV~v~~~~~V 311 (538)
.+|+|||+|+.|+.+|..|++. .+ |+++++.+.+... ++.... ..+.+.+ +.|++++.++.+
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~-~~---V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~~~~v 183 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY-LT---VALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYLETSA 183 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT-CC---EEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEETTEEE
T ss_pred CCEEEECccHHHHHHHHHHHhc-CC---EEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEcCCEE
Confidence 4799999999999999999876 33 9999987755211 111111 2222223 569999999999
Q ss_pred eEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCC
Q 009310 312 RCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLP 376 (538)
Q Consensus 312 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~ 376 (538)
.++..+. +.+.+... ..++...+.+|.+|+|+|..|..+
T Consensus 184 ~~i~~~~-----------------------~~~~~~~~---~~~~~~~~~~d~lvlAtGa~~~~~ 222 (493)
T 1y56_A 184 LGVFDKG-----------------------EYFLVPVV---RGDKLIEILAKRVVLATGAIDSTM 222 (493)
T ss_dssp CCCEECS-----------------------SSEEEEEE---ETTEEEEEEESCEEECCCEEECCC
T ss_pred EEEEcCC-----------------------cEEEEEEe---cCCeEEEEECCEEEECCCCCccCC
Confidence 8887654 33333211 011223789999999999988744
No 284
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=97.47 E-value=0.00057 Score=69.57 Aligned_cols=33 Identities=18% Similarity=0.194 Sum_probs=28.5
Q ss_pred CeEEEECCChhHHHHHHHHHH-HH-HhcCcEEEEecCC
Q 009310 245 IRVAVVGCGYSGVELAATVSE-RL-EEKGIVQAINVET 280 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~-~~-~~~~~Vtlv~~~~ 280 (538)
.+|+|||+|.+|+-+|..|++ .+ .+ |+++++..
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~~G~~~---V~vlE~~~ 56 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKNHGITN---VAVLEKGW 56 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCC---EEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHhcCCCc---EEEEeCCC
Confidence 389999999999999999998 76 44 99998754
No 285
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.45 E-value=0.00043 Score=74.42 Aligned_cols=45 Identities=24% Similarity=0.101 Sum_probs=34.3
Q ss_pred CcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHCCCCC
Q 009310 401 TLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPL 454 (538)
Q Consensus 401 ~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~~~~~ 454 (538)
+|+++..||+|++|.++.. .-...|..||..|+.|.+..+.++++
T Consensus 378 tle~k~~~gLf~AGqinGt---------tGYeEAaaqGl~AG~nAa~~~~~~~~ 422 (651)
T 3ces_A 378 TLESKFIQGLFFAGQINGT---------TGYEEAAAQGLLAGLNAARLSADKEG 422 (651)
T ss_dssp TSBBSSSBTEEECSGGGTC---------CCHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred cccccCCCCeEEEEEecCC---------cChHHHHHHHHHHHHHHHHHhcCCCC
Confidence 3444456889999988874 34557899999999999988888754
No 286
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=97.45 E-value=0.00057 Score=68.76 Aligned_cols=32 Identities=13% Similarity=0.178 Sum_probs=28.2
Q ss_pred eEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCC
Q 009310 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVET 280 (538)
Q Consensus 246 ~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~ 280 (538)
+|+|||+|.+|+-+|..|++.+.+ |+++++..
T Consensus 4 dvvIIG~Gi~Gl~~A~~La~~G~~---V~vle~~~ 35 (372)
T 2uzz_A 4 DLIIIGSGSVGAAAGYYATRAGLN---VLMTDAHM 35 (372)
T ss_dssp EEEESCTTHHHHHHHHHHHHTTCC---EEEECSSC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCe---EEEEecCC
Confidence 799999999999999999987655 99998754
No 287
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.44 E-value=0.00047 Score=73.32 Aligned_cols=104 Identities=14% Similarity=0.130 Sum_probs=72.7
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCC----------------------------------------
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICP---------------------------------------- 284 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~---------------------------------------- 284 (538)
..|+|||||++|+-+|..|++.+.+ |+++++.+.+..
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~~---v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 82 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGVR---VLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIR 82 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCC---EEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEE
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCC---EEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeee
Confidence 4899999999999999999987665 899987642210
Q ss_pred -----------------------------C----CC-hhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCC
Q 009310 285 -----------------------------T----GT-PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESG 330 (538)
Q Consensus 285 -----------------------------~----~~-~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~ 330 (538)
. .+ ..+...+.+.+++.|++++.+++|++++.+++..
T Consensus 83 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~--------- 153 (535)
T 3ihg_A 83 LAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDA--------- 153 (535)
T ss_dssp EESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGG---------
T ss_pred EEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCc---------
Confidence 0 00 1233445667778899999999999998755200
Q ss_pred cccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCC
Q 009310 331 AIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKP 373 (538)
Q Consensus 331 ~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p 373 (538)
..++++.+.+ ++...++.+|+||.|.|...
T Consensus 154 ----------~~~v~v~~~~---~~~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 154 ----------GAGVTARLAG---PDGEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp ----------CSEEEEEEEE---TTEEEEEEEEEEEECCCTTC
T ss_pred ----------cccEEEEEEc---CCCeEEEEeCEEEECCCCcc
Confidence 0156665541 11237899999999999864
No 288
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.42 E-value=0.00011 Score=74.89 Aligned_cols=41 Identities=34% Similarity=0.398 Sum_probs=35.5
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC
Q 009310 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK 123 (538)
Q Consensus 77 ~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~ 123 (538)
...++|+|||||++|+++|..|++ .|++|+|+|++++.+..
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~------~g~~v~v~E~~~~~GG~ 67 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLAS------SGQRVLIVDRRPHIGGN 67 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSSGG
T ss_pred CCCCCEEEECccHHHHHHHHHHHH------CCCceEEEeccCCCCCc
Confidence 345899999999999999999998 68899999998875543
No 289
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.42 E-value=8.1e-05 Score=75.60 Aligned_cols=37 Identities=22% Similarity=0.318 Sum_probs=32.0
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCc
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~ 120 (538)
++|+|||||+||+++|..|++. .+|++|+|||+++..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~----~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQA----RPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----CTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhc----CCCCCEEEEECCCCC
Confidence 4899999999999999999983 138899999998754
No 290
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.42 E-value=0.00012 Score=76.32 Aligned_cols=91 Identities=19% Similarity=0.149 Sum_probs=64.9
Q ss_pred CCeEEEECCChhHHHHHHHHHH-HHHh---cCcEEEEecCCccC--------CCC--ChhhHHHHHHHHHhCCCEEEcCc
Q 009310 244 LIRVAVVGCGYSGVELAATVSE-RLEE---KGIVQAINVETTIC--------PTG--TPGNREAALKVLSARKVQLVLGY 309 (538)
Q Consensus 244 ~~~VvVVGgG~~g~E~A~~l~~-~~~~---~~~Vtlv~~~~~~l--------~~~--~~~~~~~~~~~l~~~gV~v~~~~ 309 (538)
.++|+|||+|+.|+.+|..|.+ .... ...|+++++.+.+. +.. ...+...+.+.+++.||+++.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~~v 82 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNV 82 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEESC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCCCEEEeeE
Confidence 4689999999999999999988 6320 12399999986643 221 23566677788888999999885
Q ss_pred eeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCC
Q 009310 310 FVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSK 372 (538)
Q Consensus 310 ~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~ 372 (538)
.+ . ..|++. ++ .+.+|.||+|+|..
T Consensus 83 ~v----~-------------------------~~v~~~--------~~-~~~~d~lViAtG~~ 107 (456)
T 1lqt_A 83 VV----G-------------------------EHVQPG--------EL-SERYDAVIYAVGAQ 107 (456)
T ss_dssp CB----T-------------------------TTBCHH--------HH-HHHSSEEEECCCCC
T ss_pred EE----C-------------------------CEEEEC--------CC-eEeCCEEEEeeCCC
Confidence 43 1 223322 33 47899999999997
No 291
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.42 E-value=0.00045 Score=74.02 Aligned_cols=98 Identities=13% Similarity=0.047 Sum_probs=72.2
Q ss_pred eEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccC-------------------------------------C----
Q 009310 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTIC-------------------------------------P---- 284 (538)
Q Consensus 246 ~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l-------------------------------------~---- 284 (538)
.|+|||+|++|+-+|..|++.+.+ |+++++.+... .
T Consensus 51 DVvIVGaG~aGL~~A~~La~~G~~---V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 127 (570)
T 3fmw_A 51 DVVVVGGGPVGLMLAGELRAGGVG---ALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFT 127 (570)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCC---EEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCT
T ss_pred CEEEECcCHHHHHHHHHHHHCCCC---EEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccc
Confidence 799999999999999999987665 99999753211 0
Q ss_pred -CC----------------ChhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEe
Q 009310 285 -TG----------------TPGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILE 347 (538)
Q Consensus 285 -~~----------------~~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 347 (538)
.+ ...+...+.+.+++.|++++.+++|++++.++ +++++.
T Consensus 128 ~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~-----------------------~~v~v~ 184 (570)
T 3fmw_A 128 QGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDA-----------------------EAVEVT 184 (570)
T ss_dssp TCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCS-----------------------SCEEEE
T ss_pred ccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-----------------------CeEEEE
Confidence 00 01234455666777899999999999998765 556665
Q ss_pred ecccccCCcc-eEEeccEEEEecCCCC
Q 009310 348 LQPAIKGLES-QIFEADLVLWTVGSKP 373 (538)
Q Consensus 348 ~~~~~~~~~g-~~l~~D~vI~a~G~~p 373 (538)
+.. .+| +++.+|+||.|.|...
T Consensus 185 ~~~----~~G~~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 185 VAG----PSGPYPVRARYGVGCDGGRS 207 (570)
T ss_dssp EEE----TTEEEEEEESEEEECSCSSC
T ss_pred EEe----CCCcEEEEeCEEEEcCCCCc
Confidence 421 156 7899999999999764
No 292
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=97.42 E-value=0.00084 Score=67.89 Aligned_cols=32 Identities=19% Similarity=0.252 Sum_probs=27.9
Q ss_pred eEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCC
Q 009310 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVET 280 (538)
Q Consensus 246 ~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~ 280 (538)
+|+|||+|.+|+-+|..|++.+.+ |+++++..
T Consensus 5 dvvIIGaG~~Gl~~A~~La~~G~~---V~vie~~~ 36 (389)
T 2gf3_A 5 DVIVVGAGSMGMAAGYQLAKQGVK---TLLVDAFD 36 (389)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC---EEEECSSC
T ss_pred CEEEECCCHHHHHHHHHHHhCCCe---EEEEeCCC
Confidence 799999999999999999987654 99998753
No 293
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.42 E-value=0.00099 Score=70.18 Aligned_cols=101 Identities=19% Similarity=0.184 Sum_probs=72.2
Q ss_pred CCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCC--------------------------------------
Q 009310 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT-------------------------------------- 285 (538)
Q Consensus 244 ~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~-------------------------------------- 285 (538)
..+|+|||+|++|+-+|..|++.+.+ |+++++.+.....
T Consensus 12 ~~dVlIVGaGpaGl~~A~~La~~G~~---v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~ 88 (499)
T 2qa2_A 12 DASVIVVGAGPAGLMLAGELRLGGVD---VMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRP 88 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC---EEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceeccee
Confidence 35899999999999999999987665 8888875322110
Q ss_pred ---------CC-------hhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeec
Q 009310 286 ---------GT-------PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQ 349 (538)
Q Consensus 286 ---------~~-------~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 349 (538)
.+ ..+.+.+.+.+++.|++++.+++|++++.++ ++|++.+.
T Consensus 89 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~-----------------------~~v~v~~~ 145 (499)
T 2qa2_A 89 VDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEG-----------------------DHVVVEVE 145 (499)
T ss_dssp EEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECS-----------------------SCEEEEEE
T ss_pred cccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC-----------------------CEEEEEEE
Confidence 00 1233445566777899999999999998755 55666654
Q ss_pred ccccCCcceEEeccEEEEecCCCC
Q 009310 350 PAIKGLESQIFEADLVLWTVGSKP 373 (538)
Q Consensus 350 ~~~~~~~g~~l~~D~vI~a~G~~p 373 (538)
+ ++...++.+|+||.|.|...
T Consensus 146 ~---~~g~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 146 G---PDGPRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp C---SSCEEEEEEEEEEECCCTTC
T ss_pred c---CCCcEEEEeCEEEEccCccc
Confidence 2 11124799999999999864
No 294
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.41 E-value=0.00014 Score=76.59 Aligned_cols=39 Identities=23% Similarity=0.404 Sum_probs=35.1
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCc
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP 124 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p 124 (538)
+||+|||||++||+||..|++ .|++|+|+|++++.+...
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~------~g~~v~v~E~~~~~GGr~ 78 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTV------AGFKTLLLEARDRIGGRS 78 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHH------TTCCEEEECSSSBSBTTC
T ss_pred CCEEEECCcHHHHHHHHHHHH------CCCCEEEEeCCCCCCCcc
Confidence 799999999999999999998 688999999998866543
No 295
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=97.40 E-value=0.00088 Score=71.98 Aligned_cols=101 Identities=20% Similarity=0.159 Sum_probs=70.6
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCC---------------------------------------
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT--------------------------------------- 285 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~--------------------------------------- 285 (538)
.+|+|||||++|+-+|..|++.+.+ |+++++.+.....
T Consensus 24 ~DVvIVGgG~AGl~aA~~Lar~G~~---V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 100 (591)
T 3i3l_A 24 SKVAIIGGGPAGSVAGLTLHKLGHD---VTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQ 100 (591)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHcCCCC---EEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecC
Confidence 5899999999999999999887655 9999875211000
Q ss_pred ------------------------CC-hhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccC
Q 009310 286 ------------------------GT-PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKN 340 (538)
Q Consensus 286 ------------------------~~-~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (538)
++ ..+...+.+.+++.||+++.++.|+++..+++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g--------------------- 159 (591)
T 3i3l_A 101 DQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDP--------------------- 159 (591)
T ss_dssp SCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCST---------------------
T ss_pred CCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC---------------------
Confidence 00 12344556677789999999999999986421
Q ss_pred CCceEEeecccccCCcceEEeccEEEEecCCCC
Q 009310 341 SDKYILELQPAIKGLESQIFEADLVLWTVGSKP 373 (538)
Q Consensus 341 ~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p 373 (538)
+.+.+.+. .++...++.+|.||.|+|...
T Consensus 160 -~~~~V~~~---~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 160 -DRVVLTVR---RGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp -TCEEEEEE---ETTEEEEEEESEEEECCGGGC
T ss_pred -CEEEEEEe---cCCceEEEEcCEEEECCCCcc
Confidence 33444432 111226899999999999865
No 296
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.40 E-value=0.00013 Score=77.09 Aligned_cols=40 Identities=23% Similarity=0.367 Sum_probs=35.1
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK 123 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~ 123 (538)
+.++|+|||||++||+||..|++ .|++|+|+|+++..+..
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~------~g~~v~v~E~~~~~GG~ 51 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKI------HGLNVTVFEAEGKAGGK 51 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHT------TSCEEEEECSSSSSCSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHH------CCCcEEEEEeCCCCCCc
Confidence 45899999999999999999998 68899999999886544
No 297
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.38 E-value=0.00014 Score=76.61 Aligned_cols=41 Identities=29% Similarity=0.394 Sum_probs=35.8
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC
Q 009310 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK 123 (538)
Q Consensus 77 ~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~ 123 (538)
..+++|+|||||++||+||..|++ .|++|+|+|+++.....
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~------~g~~v~vlE~~~~~gg~ 71 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAG------AGHQVTVLEASERPGGR 71 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHH------HTCEEEEECSSSSSBTT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHh------CCCeEEEEECCCCCCCc
Confidence 345799999999999999999998 57899999999876554
No 298
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.38 E-value=0.00051 Score=71.46 Aligned_cols=101 Identities=15% Similarity=0.020 Sum_probs=69.7
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCC-----C----------C-----------------------
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICP-----T----------G----------------------- 286 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~-----~----------~----------------------- 286 (538)
.+|+|||||+.|+-+|..|++.+.+ |+++++.+.... . +
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~---V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 83 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLK---ILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPD 83 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCC---EEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCC---EEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCC
Confidence 3799999999999999999876554 999998653210 0 0
Q ss_pred --------------C-hhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceE-Eeecc
Q 009310 287 --------------T-PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYI-LELQP 350 (538)
Q Consensus 287 --------------~-~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~ 350 (538)
+ ..+.+.+.+.+++.|++++.++.|+++..++ +.++ +.+.
T Consensus 84 ~~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~-----------------------~~v~gv~~~- 139 (453)
T 3atr_A 84 MQTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFED-----------------------GYVKGAVLF- 139 (453)
T ss_dssp SSCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEET-----------------------TEEEEEEEE-
T ss_pred CceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEEC-----------------------CEEEEEEEE-
Confidence 0 1233455666777899999999999997654 3332 2221
Q ss_pred cccCCcc--eEEeccEEEEecCCCCC
Q 009310 351 AIKGLES--QIFEADLVLWTVGSKPL 374 (538)
Q Consensus 351 ~~~~~~g--~~l~~D~vI~a~G~~p~ 374 (538)
...+| .++.+|.||.|.|....
T Consensus 140 --~~~~G~~~~~~ad~VV~AdG~~s~ 163 (453)
T 3atr_A 140 --NRRTNEELTVYSKVVVEATGYSRS 163 (453)
T ss_dssp --ETTTTEEEEEECSEEEECCGGGCT
T ss_pred --EcCCCceEEEEcCEEEECcCCchh
Confidence 11133 37999999999998654
No 299
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.37 E-value=0.00038 Score=71.01 Aligned_cols=35 Identities=20% Similarity=0.301 Sum_probs=30.3
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCcc
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTI 282 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~ 282 (538)
.+|+|||||++|+.+|..|++.+.+ |+++++.+.+
T Consensus 27 ~dV~IVGaG~aGl~~A~~L~~~G~~---v~v~E~~~~~ 61 (398)
T 2xdo_A 27 KNVAIIGGGPVGLTMAKLLQQNGID---VSVYERDNDR 61 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCE---EEEEECSSST
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCC---EEEEeCCCCc
Confidence 5899999999999999999887655 9999987643
No 300
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.37 E-value=0.00011 Score=76.38 Aligned_cols=40 Identities=23% Similarity=0.348 Sum_probs=35.1
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCc
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKP 124 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p 124 (538)
.+||+|||||++||+||..|++ .|++|+|+|+++..+...
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~------~g~~v~v~E~~~~~GG~~ 44 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRK------AGLSVAVIEARDRVGGRT 44 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCTTC
T ss_pred cCCEEEECCCHHHHHHHHHHHH------CCCcEEEEECCCCCCCce
Confidence 4799999999999999999998 678999999998765543
No 301
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.36 E-value=0.00013 Score=76.22 Aligned_cols=41 Identities=32% Similarity=0.464 Sum_probs=34.3
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK 123 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~ 123 (538)
++||+|||||++||++|++|++.+ ++++|+|+|+++.....
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g----~~~~v~v~E~~~~~GG~ 44 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAF----PDLNITLLEAGERLGGK 44 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHC----TTSEEEEECSSSSSBTT
T ss_pred cccEEEECCCHHHHHHHHHHHHhC----CCCCEEEEECCCCCCce
Confidence 479999999999999999999942 23899999998875543
No 302
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.36 E-value=0.00059 Score=74.79 Aligned_cols=33 Identities=18% Similarity=0.211 Sum_probs=29.2
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCC
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVET 280 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~ 280 (538)
.+|+|||||.+|+-+|..|++.+.+ |+++++..
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~~G~~---V~vlEk~~ 305 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLRRGWQ---VTLYCADE 305 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCE---EEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCe---EEEEeCCC
Confidence 5899999999999999999987765 99999853
No 303
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.35 E-value=0.001 Score=70.03 Aligned_cols=101 Identities=16% Similarity=0.079 Sum_probs=71.5
Q ss_pred CCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCC--------------------------------------
Q 009310 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPT-------------------------------------- 285 (538)
Q Consensus 244 ~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~-------------------------------------- 285 (538)
..+|+|||+|++|+-+|..|++.+.+ |+++++.+.+...
T Consensus 11 ~~dVlIVGaGpaGl~~A~~La~~G~~---v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~ 87 (500)
T 2qa1_A 11 DAAVIVVGAGPAGMMLAGELRLAGVE---VVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLP 87 (500)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC---EEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhcccccccccccee
Confidence 35899999999999999999987665 8888875322100
Q ss_pred -----CC-----------hhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeec
Q 009310 286 -----GT-----------PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQ 349 (538)
Q Consensus 286 -----~~-----------~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 349 (538)
.. ..+.+.+.+.+++.|++++.+++|++++.++ ++|++.+.
T Consensus 88 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~-----------------------~~v~v~~~ 144 (500)
T 2qa1_A 88 IDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDG-----------------------AGVTVEVR 144 (500)
T ss_dssp EEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEET-----------------------TEEEEEEE
T ss_pred cccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcC-----------------------CeEEEEEE
Confidence 00 1123445566777899999999999998755 55666554
Q ss_pred ccccCCcceEEeccEEEEecCCCC
Q 009310 350 PAIKGLESQIFEADLVLWTVGSKP 373 (538)
Q Consensus 350 ~~~~~~~g~~l~~D~vI~a~G~~p 373 (538)
+ ++...++.+|+||.|.|...
T Consensus 145 ~---~~g~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 145 G---PEGKHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp E---TTEEEEEEESEEEECCCTTC
T ss_pred c---CCCCEEEEeCEEEECCCcch
Confidence 1 11124789999999999864
No 304
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.34 E-value=0.0001 Score=82.35 Aligned_cols=40 Identities=33% Similarity=0.438 Sum_probs=35.5
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCccc
Q 009310 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF 122 (538)
Q Consensus 77 ~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~ 122 (538)
...++|+|||||++||+||..|++ .|++|+|+|+++..+.
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~------~g~~v~v~E~~~~~GG 315 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQS------FGMDVTLLEARDRVGG 315 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSCT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHH------CCCcEEEEEecCcCCC
Confidence 456899999999999999999998 7889999999987543
No 305
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.32 E-value=0.00013 Score=79.74 Aligned_cols=41 Identities=32% Similarity=0.427 Sum_probs=35.9
Q ss_pred CCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCccc
Q 009310 76 DKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF 122 (538)
Q Consensus 76 ~~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~ 122 (538)
....++|+|||||++||++|..|++ .|++|+|+|+++..+.
T Consensus 104 ~~~~~~v~viG~G~~gl~~a~~l~~------~g~~v~~~e~~~~~gg 144 (662)
T 2z3y_A 104 TKKTGKVIIIGSGVSGLAAARQLQS------FGMDVTLLEARDRVGG 144 (662)
T ss_dssp SSCCCEEEEECCBHHHHHHHHHHHH------TTCEEEEECSSSSSBT
T ss_pred ccCCCeEEEECcCHHHHHHHHHHHH------CCCeEEEEecCCCCCC
Confidence 3456899999999999999999998 7889999999987543
No 306
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.32 E-value=0.00099 Score=71.52 Aligned_cols=46 Identities=22% Similarity=0.204 Sum_probs=35.8
Q ss_pred CcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHCCCCCC
Q 009310 401 TLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLL 455 (538)
Q Consensus 401 ~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~~~~~~ 455 (538)
+|+++..+|+|++|+++.. .....|..||..|+.|++..+.++++.
T Consensus 372 tle~k~~~gLf~AGqi~g~---------~Gy~eA~a~G~~AG~naa~~~~~~~~~ 417 (641)
T 3cp8_A 372 TMETRPVENLFFAGQINGT---------SGYEEAAAQGLMAGINAVRKILGKELI 417 (641)
T ss_dssp TSBBSSSBTEEECSGGGTB---------CCHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred cccccCcCCEEEEEeecCC---------ccHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 4555557899999999985 234488999999999999988887643
No 307
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.32 E-value=0.00043 Score=75.78 Aligned_cols=103 Identities=18% Similarity=0.223 Sum_probs=64.1
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccC-------------------------------CCCCCEEEEEcCCCCcccCcch
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQ-------------------------------DDKKPQVLLVDQSERFVFKPML 126 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~-------------------------------~~~g~~V~lie~~~~~~~~p~~ 126 (538)
..++|+|||||+.|+.+|..|++.+.. .....+|+++++.+..
T Consensus 493 ~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~------ 566 (671)
T 1ps9_A 493 VGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASK------ 566 (671)
T ss_dssp CCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSC------
T ss_pred CCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchh------
Confidence 357999999999999999999874310 0001345555544321
Q ss_pred hhhhcCCCCCccccccHHHHhccCCcEEEEe-eEEEEcCCCCcCcCCCceeecccEEEcCCc--eEEEeeEEEEeCCCCC
Q 009310 127 YELLSGEVDAWEIAPRFADLLANTGVQFFKD-RVKLLCPSDHLGVNGPMACTHGGTVLLESG--LIVEYDWLVLSLGAEP 203 (538)
Q Consensus 127 ~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i~~~~~~~~~~~~~~~~~~~v~~~~g--~~~~yD~lVlAtG~~~ 203 (538)
+...+. ......+.+.+++.+|+++.+ +++.++.+. . .+. .+| ..+.+|.||+|+|..|
T Consensus 567 ---l~~~l~-~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~-v------------~~~-~~G~~~~i~~D~Vi~a~G~~p 628 (671)
T 1ps9_A 567 ---PGQGLG-KTTGWIHRTTLLSRGVKMIPGVSYQKIDDDG-L------------HVV-INGETQVLAVDNVVICAGQEP 628 (671)
T ss_dssp ---TTTTSC-TTTHHHHHHHHHHTTCEEECSCEEEEEETTE-E------------EEE-ETTEEEEECCSEEEECCCEEE
T ss_pred ---hccccc-cccHHHHHHHHHhcCCEEEeCcEEEEEeCCe-E------------EEe-cCCeEEEEeCCEEEECCCccc
Confidence 111111 112223455667789999986 788886432 1 232 345 5799999999999887
Q ss_pred C
Q 009310 204 K 204 (538)
Q Consensus 204 ~ 204 (538)
+
T Consensus 629 ~ 629 (671)
T 1ps9_A 629 N 629 (671)
T ss_dssp C
T ss_pred c
Confidence 4
No 308
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.30 E-value=0.00076 Score=72.22 Aligned_cols=46 Identities=22% Similarity=0.107 Sum_probs=36.7
Q ss_pred CcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHCCCCCC
Q 009310 401 TLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLL 455 (538)
Q Consensus 401 ~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~~~~~~ 455 (538)
+|+++..||+|.+|.++.. .-...|..||..|+.|.+..+.++++.
T Consensus 383 tLe~k~~~gLf~AGqinGt---------~GyeEAaaqGl~AG~nAa~~~~~~~~~ 428 (637)
T 2zxi_A 383 TLETKKIRGLFHAGNFNGT---------TGYEEAAGQGIVAGINAALRAFGKEPI 428 (637)
T ss_dssp TSBBSSSBTEEECGGGGTB---------CSHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred cccccCCCCEEEeeecCCc---------chHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 4555557899999999985 345588999999999999999887643
No 309
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.30 E-value=0.00015 Score=83.27 Aligned_cols=93 Identities=11% Similarity=0.134 Sum_probs=67.8
Q ss_pred CCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccC-------CC--CChhhHHHHHHHHHhCCCEEEcCceeeEE
Q 009310 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTIC-------PT--GTPGNREAALKVLSARKVQLVLGYFVRCI 314 (538)
Q Consensus 244 ~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l-------~~--~~~~~~~~~~~~l~~~gV~v~~~~~V~~i 314 (538)
+++|+|||+|+.|+.+|..|++.+.. .|+++++.+.+. +. .+....+...+.+++.||++++++.+..
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~--~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~- 263 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYS--DITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSE- 263 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCC--CEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTTTCEEEESCCBST-
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCC--cEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHCCcEEEcccEecc-
Confidence 46899999999999999999987752 299999976543 11 2344555566788999999999876631
Q ss_pred eccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCC-CCC
Q 009310 315 RRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGS-KPL 374 (538)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~-~p~ 374 (538)
+.+++. ++..+.+|.||+|+|. +|.
T Consensus 264 ---------------------------~~v~~~--------~~~~~~~d~vvlAtGa~~p~ 289 (1025)
T 1gte_A 264 ---------------------------NEITLN--------TLKEEGYKAAFIGIGLPEPK 289 (1025)
T ss_dssp ---------------------------TSBCHH--------HHHHTTCCEEEECCCCCEEC
T ss_pred ---------------------------ceEEhh--------hcCccCCCEEEEecCCCCCC
Confidence 112222 3445779999999998 466
No 310
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.28 E-value=0.00021 Score=72.65 Aligned_cols=38 Identities=32% Similarity=0.476 Sum_probs=34.0
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK 123 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~ 123 (538)
++|+|||||++|+++|..|++ .|++|+|+|++++.+..
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~------~g~~v~v~E~~~~~GG~ 41 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAE------KGHQVHIIDQRDHIGGN 41 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHT------TTCEEEEEESSSSSSGG
T ss_pred CCEEEECcCHHHHHHHHHHHH------CCCcEEEEEecCCcCCc
Confidence 699999999999999999998 68899999999876543
No 311
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.28 E-value=0.00015 Score=73.22 Aligned_cols=38 Identities=21% Similarity=0.270 Sum_probs=33.5
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK 123 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~ 123 (538)
+||+|||||++|+++|..|++ .|++|+|+|++++.+..
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~------~g~~v~v~E~~~~~GG~ 39 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKK------LNKKVLVIEKRNHIGGN 39 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGG------GTCCEEEECSSSSSSGG
T ss_pred CCEEEECcCHHHHHHHHHHHh------CCCcEEEEecCCCCCcc
Confidence 589999999999999999998 57899999998875443
No 312
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.27 E-value=0.00019 Score=71.94 Aligned_cols=50 Identities=18% Similarity=0.101 Sum_probs=42.4
Q ss_pred CCCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHCCCCCCCc
Q 009310 399 DETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDRPLLPF 457 (538)
Q Consensus 399 d~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~~~~~~p~ 457 (538)
+.+|+++..+|+|++|+.+.. .-...|..||..|+.|++..+.|+++..+
T Consensus 320 ~~tle~k~~~~Lf~AGqi~G~---------~Gy~eAaa~Gl~AG~naa~~~~g~~p~~l 369 (443)
T 3g5s_A 320 GETLEFREAEGLYAAGVLAGV---------EGYLESAATGFLAGLNAARKALGLPPVAP 369 (443)
T ss_dssp CTTSEETTEEEEEECGGGGTB---------CSHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred ChhceecCCCCEEECcccccc---------HHHHHHHHhHHHHHHHHHHHhcCCCCCCC
Confidence 478999889999999999986 34568999999999999999999875433
No 313
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.27 E-value=0.00018 Score=75.54 Aligned_cols=41 Identities=27% Similarity=0.250 Sum_probs=35.1
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCC-CEEEEEcCCCCcccC
Q 009310 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKK-PQVLLVDQSERFVFK 123 (538)
Q Consensus 77 ~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g-~~V~lie~~~~~~~~ 123 (538)
.+.++|+|||||++||++|..|++ .| .+|+|+|+++..+..
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~------~g~~~v~v~E~~~~~GG~ 48 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTE------LGYKNWHLYECNDTPGGL 48 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHH------TTCCSEEEEESSSSSSGG
T ss_pred ccCCCEEEECcCHHHHHHHHHHHH------cCCCCEEEEeCCCCCCCe
Confidence 345899999999999999999998 55 699999999876443
No 314
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=97.23 E-value=0.0011 Score=71.09 Aligned_cols=34 Identities=21% Similarity=0.341 Sum_probs=28.8
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCc
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT 281 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~ 281 (538)
.+|+|||+|+.|+.+|..+++.+.+ |+++++.+.
T Consensus 127 ~~v~viG~G~aG~~aa~~~~~~g~~---v~~~e~~~~ 160 (572)
T 1d4d_A 127 TDVVIIGSGGAGLAAAVSARDAGAK---VILLEKEPI 160 (572)
T ss_dssp CSEEEECCSHHHHHHHHHHHSSSCC---EEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCc---EEEEecCCC
Confidence 4799999999999999999876654 999987653
No 315
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.22 E-value=0.00015 Score=72.51 Aligned_cols=39 Identities=21% Similarity=0.226 Sum_probs=30.9
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
+||+|||||++|+++|++|++.+....++++|+|||++.
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 489999999999999999999431001237999999986
No 316
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=97.22 E-value=0.00093 Score=67.29 Aligned_cols=33 Identities=21% Similarity=0.242 Sum_probs=28.0
Q ss_pred CCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCC
Q 009310 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVET 280 (538)
Q Consensus 244 ~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~ 280 (538)
.++|+|||+|.+|+-+|..|+ .+.+ |+++++.+
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~G~~---V~vlE~~~ 41 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-AHGR---VVVLEREA 41 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-TTSC---EEEECSSS
T ss_pred cCCEEEECCcHHHHHHHHHHh-CCCC---EEEEECCC
Confidence 468999999999999999998 4544 99999864
No 317
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.21 E-value=0.0015 Score=66.48 Aligned_cols=35 Identities=20% Similarity=0.337 Sum_probs=30.7
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCcc
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTI 282 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~ 282 (538)
.+|+|||+|++|+-+|..|++.+.+ |+++++.+.+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~---v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIK---VTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCC---EEEEecCCCC
Confidence 4899999999999999999987766 9999986654
No 318
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.19 E-value=0.00089 Score=68.47 Aligned_cols=32 Identities=16% Similarity=0.230 Sum_probs=28.1
Q ss_pred CeEEEECCChhHHHHHHHHHHH--HHhcCcEEEEecC
Q 009310 245 IRVAVVGCGYSGVELAATVSER--LEEKGIVQAINVE 279 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~--~~~~~~Vtlv~~~ 279 (538)
..|+|||+|.+|+-+|..|++. +.+ |+++++.
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~---V~vlE~~ 70 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRS---LLLVEEG 70 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSC---EEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCe---EEEEeCC
Confidence 3799999999999999999987 655 9999874
No 319
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.16 E-value=0.0028 Score=68.06 Aligned_cols=104 Identities=15% Similarity=0.113 Sum_probs=69.2
Q ss_pred eEEEECCChhHHHHHHHHHHH------HHhcCcEEEEecCCccCCC----------------------------------
Q 009310 246 RVAVVGCGYSGVELAATVSER------LEEKGIVQAINVETTICPT---------------------------------- 285 (538)
Q Consensus 246 ~VvVVGgG~~g~E~A~~l~~~------~~~~~~Vtlv~~~~~~l~~---------------------------------- 285 (538)
.|+|||+|+.|+-+|..|++. +.+ |+++++.+.+...
T Consensus 37 DVvIVGaG~aGlaaA~~La~~~~~~~~G~~---V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~ 113 (584)
T 2gmh_A 37 DVVIVGAGPAGLSAATRLKQLAAQHEKDLR---VCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDR 113 (584)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHTTCCCC---EEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEE
T ss_pred CEEEECcCHHHHHHHHHHHhcccccCCCCc---EEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhh
Confidence 799999999999999999987 433 8888875432100
Q ss_pred -----------C---Ch--------------hhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCccccccc
Q 009310 286 -----------G---TP--------------GNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAA 337 (538)
Q Consensus 286 -----------~---~~--------------~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~ 337 (538)
+ +. .+.+.+.+.+++.||+++.++.++++..+++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~------------------ 175 (584)
T 2gmh_A 114 FGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHED------------------ 175 (584)
T ss_dssp EEEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTT------------------
T ss_pred eeeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCC------------------
Confidence 0 00 2334566677788999999999999876431
Q ss_pred ccCCCceE-Eeeccc---ccCC------cceEEeccEEEEecCCCCC
Q 009310 338 DKNSDKYI-LELQPA---IKGL------ESQIFEADLVLWTVGSKPL 374 (538)
Q Consensus 338 ~~~~~~v~-~~~~~~---~~~~------~g~~l~~D~vI~a~G~~p~ 374 (538)
+.+. +.+.+. .++. ++.++.+|.||.|.|....
T Consensus 176 ----g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 176 ----GSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp ----SSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCH
T ss_pred ----CCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCch
Confidence 1222 322110 0110 1468999999999998754
No 320
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.14 E-value=0.0031 Score=62.13 Aligned_cols=182 Identities=14% Similarity=0.066 Sum_probs=101.9
Q ss_pred CeEEEECCChhHHHHHHHHHHH--HHhcCcEEEEecCCccCCCC------------------------------------
Q 009310 245 IRVAVVGCGYSGVELAATVSER--LEEKGIVQAINVETTICPTG------------------------------------ 286 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~--~~~~~~Vtlv~~~~~~l~~~------------------------------------ 286 (538)
.+|+|||+|+.|+.+|..|++. +.+ |+++++.+.+....
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~---V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~ 142 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLK---VCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVV 142 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSC---EEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEE
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCe---EEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEE
Confidence 3799999999999999999887 554 99999865442110
Q ss_pred --ChhhHHHHHHHHHh-CCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccc------cCCcc
Q 009310 287 --TPGNREAALKVLSA-RKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAI------KGLES 357 (538)
Q Consensus 287 --~~~~~~~~~~~l~~-~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~~g 357 (538)
...+...+.+.+.+ .||+++.++.|+++..+..... +...+ .+|.+...... ...++
T Consensus 143 ~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~----g~~rV----------~GVvv~~~~v~~~g~~~~~~d~ 208 (326)
T 2gjc_A 143 KHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEK----GEVTV----------AGVVTNWTLVTQAHGTQCCMDP 208 (326)
T ss_dssp SCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC---------CE----------EEEEEEEHHHHTC---CCCCCC
T ss_pred cchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccC----CCcEE----------EEEEecceeecccccceeccCc
Confidence 01123344555666 4999999999999876420000 00000 23444311000 01145
Q ss_pred eEEec---------------cEEEEecCCCCCC-CCCCCCCCccCCCCcCCCCC--------------eeeCCCcccCCC
Q 009310 358 QIFEA---------------DLVLWTVGSKPLL-PHVEPPNNRLHDLPLNARGQ--------------AETDETLCVKGH 407 (538)
Q Consensus 358 ~~l~~---------------D~vI~a~G~~p~~-~~l~~~~~~~~~~~l~~~G~--------------i~vd~~l~~~~~ 407 (538)
..+.+ |.||.|+|..... .++..- . ..++..+. .+|+.+-...-+
T Consensus 209 ~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~~~~----~-~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~~~ 283 (326)
T 2gjc_A 209 NVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCAKR----I-VDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGV 283 (326)
T ss_dssp EEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHHHHH----H-HHHHSSCCCCCCCCBCHHHHHHHHHHHCEECTTS
T ss_pred eEEEEeeccccccccccccCCEEEECcCCCchHHHHHHhh----c-cccccccccCceeccccccchhheeecCCCcccc
Confidence 77999 9999999987542 221100 0 00111110 112222221257
Q ss_pred CCEEEccccccccCCCCCCC-CccHHHHHHHHHHHHHHHHHHHC
Q 009310 408 PRIFALGDSSALRDSSGRPL-PATAQVAFQQADFAGWNLWAAIN 450 (538)
Q Consensus 408 ~~VfaiGD~~~~~~~~~~~~-~~~~~~A~~qg~~aa~~i~~~l~ 450 (538)
|++|++|-.....+. .+. .+..-.-.-.|+.+|..|+..+.
T Consensus 284 ~~~~~~g~~~~~~~~--~~r~g~~fg~m~~sg~~~a~~~~~~~~ 325 (326)
T 2gjc_A 284 DNMYFAGMEVAELDG--LNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp TTEEECTHHHHHHHT--CCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEECChHHHHhcC--CCCCChhhhhhhhhhHHHHHHHHHHhh
Confidence 999999999865332 111 12233345789999999887663
No 321
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.11 E-value=0.0027 Score=64.46 Aligned_cols=32 Identities=38% Similarity=0.404 Sum_probs=28.1
Q ss_pred eEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCC
Q 009310 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVET 280 (538)
Q Consensus 246 ~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~ 280 (538)
.|+|||+|.+|+-+|..|++.+.+ |+++++..
T Consensus 6 DVvIIGaG~~Gl~~A~~La~~G~~---V~vlE~~~ 37 (397)
T 2oln_A 6 DVVVVGGGPVGLATAWQVAERGHR---VLVLERHT 37 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC---EEEEESSC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCe---EEEEeCCC
Confidence 799999999999999999987665 88988754
No 322
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=97.09 E-value=0.00032 Score=75.10 Aligned_cols=36 Identities=28% Similarity=0.392 Sum_probs=32.7
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
..+||+|||||++|+++|+.|++ +|++|+|+|+++.
T Consensus 17 ~~~DVvVIGgGi~Gl~~A~~La~------~G~~V~LlEk~d~ 52 (561)
T 3da1_A 17 KQLDLLVIGGGITGAGIALDAQV------RGIQTGLVEMNDF 52 (561)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHT------TTCCEEEEESSST
T ss_pred CCCCEEEECCCHHHHHHHHHHHh------CCCcEEEEECCCC
Confidence 34899999999999999999998 7889999999864
No 323
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.08 E-value=0.00043 Score=71.61 Aligned_cols=40 Identities=15% Similarity=0.197 Sum_probs=35.2
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK 123 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~ 123 (538)
..++|+|||||++|+++|..|++ .|++|+|+|+++..+..
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~------~g~~v~~~e~~~~~gg~ 44 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSV------NGKKVLHMDRNPYYGGE 44 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCTT
T ss_pred CcCCEEEECcCHHHHHHHHHHHH------CCCcEEEEecCCCcccc
Confidence 34799999999999999999998 68899999999876544
No 324
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=97.07 E-value=0.0002 Score=74.40 Aligned_cols=36 Identities=28% Similarity=0.362 Sum_probs=31.3
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCC-CEEEEEcCCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKK-PQVLLVDQSER 119 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g-~~V~lie~~~~ 119 (538)
..+||||||||++|+++|+.|++ .| ++|+|||++..
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~------~G~~~V~vlE~~~~ 58 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKV------WSGGSVLVVDAGHA 58 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH------HHCSCEEEEESSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHh------CCCCcEEEEccCCC
Confidence 45799999999999999999999 46 79999999433
No 325
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.02 E-value=0.0015 Score=74.29 Aligned_cols=115 Identities=15% Similarity=0.029 Sum_probs=70.6
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCC---C-----CC----hhhHHHHHHHHHhC-CCEEEcCcee
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICP---T-----GT----PGNREAALKVLSAR-KVQLVLGYFV 311 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~---~-----~~----~~~~~~~~~~l~~~-gV~v~~~~~V 311 (538)
.+|+|||+|+.|+.+|..+++.+.+ |++++..+.+.. . .+ .++...+.+.+.+. +|+++.++.|
T Consensus 129 ~dVvVIGaGpAGl~AA~~la~~G~~---V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~V 205 (965)
T 2gag_A 129 TDVLVVGAGPAGLAAAREASRSGAR---VMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTTV 205 (965)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCc---EEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCEE
Confidence 4899999999999999999987655 999998765421 0 11 12233444556664 9999999999
Q ss_pred eEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEEEecCCCCCCC
Q 009310 312 RCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVLWTVGSKPLLP 376 (538)
Q Consensus 312 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~ 376 (538)
..+...+..... .. ..+.+.+.........++..+.+|.||+|||..|..+
T Consensus 206 ~~i~~~~~~~~v------------~~--~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~ 256 (965)
T 2gag_A 206 FGSYDANYLIAA------------QR--RTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPI 256 (965)
T ss_dssp EEEETTTEEEEE------------EE--CSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCC
T ss_pred EeeecCCceeee------------Ee--ecccccccccccCCCCceEEEECCEEEECCCCccCCC
Confidence 988764311000 00 0011111100000011345799999999999987643
No 326
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.01 E-value=0.00043 Score=71.96 Aligned_cols=41 Identities=17% Similarity=0.209 Sum_probs=36.1
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC
Q 009310 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK 123 (538)
Q Consensus 77 ~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~ 123 (538)
...+||+|||+|.+|+++|..|++ .|++|+++|++++++..
T Consensus 18 ~~~~dv~iiG~G~~g~~~a~~l~~------~g~~v~~~e~~~~~Gg~ 58 (475)
T 3p1w_A 18 GEHYDVIILGTGLKECILSGLLSH------YGKKILVLDRNPYYGGE 58 (475)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCGG
T ss_pred cccCCEEEECCCHHHHHHHHHHHH------CCCcEEEEeccCCCCCC
Confidence 445899999999999999999999 78899999999876543
No 327
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.01 E-value=0.0031 Score=64.41 Aligned_cols=34 Identities=18% Similarity=0.283 Sum_probs=28.5
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCc-EEEEecCCc
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGI-VQAINVETT 281 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~-Vtlv~~~~~ 281 (538)
.+|+|||||++|+-+|..|++.+. . |+++++.+.
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G~---~~v~v~E~~~~ 39 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAGI---GKVTLLESSSE 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---SEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCC---CeEEEEECCCC
Confidence 489999999999999999987543 4 889988654
No 328
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.98 E-value=0.00065 Score=75.06 Aligned_cols=96 Identities=21% Similarity=0.246 Sum_probs=64.8
Q ss_pred CCeEEEEC--CcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccCcchhhhhcCCCCCccccccHHHHhccCCcEEEE
Q 009310 79 KPRICILG--GGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFKPMLYELLSGEVDAWEIAPRFADLLANTGVQFFK 156 (538)
Q Consensus 79 ~~~VVIIG--gG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~p~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 156 (538)
.++|+||| ||+.|+.+|..|++ .|.+|+|+++.+ +. +.. ... .. ...+.+.+++.+|+++.
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~------~G~~Vtlv~~~~-l~--~~~--~~~-----~~-~~~~~~~l~~~GV~i~~ 590 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLAT------AGHEVTIVSGVH-LA--NYM--HFT-----LE-YPNMMRRLHELHVEELG 590 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHH------TTCEEEEEESSC-TT--HHH--HHT-----TC-HHHHHHHHHHTTCEEEC
T ss_pred CCeEEEEcCCCCchHHHHHHHHHH------cCCEEEEEeccc-cc--ccc--ccc-----cc-HHHHHHHHHhCCCEEEc
Confidence 46999999 99999999999998 567999999976 21 100 000 01 12344556678999988
Q ss_pred e-eEEEEcCCCCcCcCCCceeecccEEE--cCC-------------------ceEEEeeEEEEeCCCCCC
Q 009310 157 D-RVKLLCPSDHLGVNGPMACTHGGTVL--LES-------------------GLIVEYDWLVLSLGAEPK 204 (538)
Q Consensus 157 ~-~v~~i~~~~~~~~~~~~~~~~~~~v~--~~~-------------------g~~~~yD~lVlAtG~~~~ 204 (538)
+ .++.++.+.. .+. ..+ ...+.+|.||+|+|..|+
T Consensus 591 ~~~v~~i~~~~v-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~ 647 (729)
T 1o94_A 591 DHFCSRIEPGRM-------------EIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSE 647 (729)
T ss_dssp SEEEEEEETTEE-------------EEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEEC
T ss_pred CcEEEEEECCeE-------------EEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCC
Confidence 5 7888864321 111 011 123899999999998764
No 329
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=96.92 E-value=0.00053 Score=73.50 Aligned_cols=35 Identities=20% Similarity=0.339 Sum_probs=32.1
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
.+||+|||||.+|+++|+.|++ +|++|+|||+++.
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~------rG~~V~LlE~~~~ 66 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAA------SGIKTGLIEMQDF 66 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH------TTCCEEEECSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHH------CCCcEEEEeCCCC
Confidence 3799999999999999999999 7889999999863
No 330
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=96.92 E-value=0.0053 Score=63.21 Aligned_cols=33 Identities=21% Similarity=0.263 Sum_probs=28.3
Q ss_pred CeEEEECCChhHHHHHHHHHHHHH-hcCcEEEEecCC
Q 009310 245 IRVAVVGCGYSGVELAATVSERLE-EKGIVQAINVET 280 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~-~~~~Vtlv~~~~ 280 (538)
..|+|||+|..|+-+|..|++.+. + |+++++..
T Consensus 7 ~dVvIIGgG~aGlsaA~~La~~G~~~---V~vlE~~~ 40 (438)
T 3dje_A 7 SSLLIVGAGTWGTSTALHLARRGYTN---VTVLDPYP 40 (438)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCC---EEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCCc---EEEEeCCC
Confidence 479999999999999999998876 4 88888643
No 331
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=96.89 E-value=0.00058 Score=73.44 Aligned_cols=34 Identities=18% Similarity=0.305 Sum_probs=31.3
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
..||||||||+||++||..|++ .|++|+||||.+
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~------~G~~V~vlEK~~ 40 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQ------SGQTCALLSKVF 40 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHH------CCCcEEEEecCC
Confidence 3699999999999999999998 678999999975
No 332
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=96.88 E-value=0.00075 Score=70.53 Aligned_cols=39 Identities=23% Similarity=0.485 Sum_probs=33.2
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCC-EEEEEcCCCCccc
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSERFVF 122 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~~~~~~ 122 (538)
..++|+|||||++|+++|..|++ .|+ +|+|+|+++....
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~------~g~~~v~~~e~~~~~gg 42 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSE------AGITDLLILEATDHIGG 42 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHH------TTCCCEEEECSSSSSBT
T ss_pred CCCeEEEECCCHHHHHHHHHHHh------cCCCceEEEeCCCCCCC
Confidence 34799999999999999999998 677 8999999987543
No 333
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=96.87 E-value=0.0054 Score=64.69 Aligned_cols=33 Identities=21% Similarity=0.325 Sum_probs=28.4
Q ss_pred eEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCc
Q 009310 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT 281 (538)
Q Consensus 246 ~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~ 281 (538)
.|+|||+|..|+-+|..+++.+.+ |.++++.+.
T Consensus 43 DVvVVGaG~AGl~AA~~aa~~G~~---V~vlEk~~~ 75 (510)
T 4at0_A 43 DVVVAGYGIAGVAASIEAARAGAD---VLVLERTSG 75 (510)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCc---EEEEeCCCC
Confidence 799999999999999999987655 888887543
No 334
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=96.86 E-value=0.00065 Score=73.37 Aligned_cols=34 Identities=21% Similarity=0.188 Sum_probs=31.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
..||||||||+|||+||+.|++ .|++|+|||+..
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~------~G~~V~vlEK~~ 51 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSE------AGFNTACVTKLF 51 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSC
T ss_pred cCCEEEECccHHHHHHHHHHHH------CCCcEEEEeccC
Confidence 4799999999999999999998 688999999975
No 335
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=96.84 E-value=0.00068 Score=73.76 Aligned_cols=58 Identities=14% Similarity=0.044 Sum_probs=41.0
Q ss_pred CCCCeeeCCCcccCCCCCEEEccccccc-cCCCCCCCCccHHHHHHHHHHHHHHHHHHHC
Q 009310 392 ARGQAETDETLCVKGHPRIFALGDSSAL-RDSSGRPLPATAQVAFQQADFAGWNLWAAIN 450 (538)
Q Consensus 392 ~~G~i~vd~~l~~~~~~~VfaiGD~~~~-~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~ 450 (538)
..|.|.||...|+ ..|++||+|+|+.. .....+.-......++-.|+.++.+++....
T Consensus 371 t~GGi~vd~~~~v-~IpGLYAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~~ 429 (660)
T 2bs2_A 371 SMGGIRTDYRGEA-KLKGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHCA 429 (660)
T ss_dssp ECCEEECCTTSBC-SSBTEEECGGGEECCSSTTCCCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceEEECCCCce-ecCCEEeccccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHhh
Confidence 3588999999999 89999999998642 1111111123445677889999999887664
No 336
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=96.81 E-value=0.0008 Score=74.51 Aligned_cols=39 Identities=23% Similarity=0.330 Sum_probs=34.3
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCccc
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVF 122 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~ 122 (538)
..++|+|||||++|+++|..|++ .|++|+|+|+++....
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~------~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHN------FGIKVTVLEAKDRIGG 373 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHH------HTCEEEEECSSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHH------CCCcEEEEecccceec
Confidence 45899999999999999999998 5789999999887544
No 337
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=96.73 E-value=0.0066 Score=64.79 Aligned_cols=32 Identities=19% Similarity=0.350 Sum_probs=27.7
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecC
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVE 279 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~ 279 (538)
-.|+|||||.+|+-+|..++..+.+ |.++++.
T Consensus 19 ~DVvVIGgGi~Gl~~A~~La~~G~~---V~LlEk~ 50 (561)
T 3da1_A 19 LDLLVIGGGITGAGIALDAQVRGIQ---TGLVEMN 50 (561)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCC---EEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCc---EEEEECC
Confidence 4799999999999999999987665 8888764
No 338
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=96.72 E-value=0.0073 Score=63.51 Aligned_cols=32 Identities=25% Similarity=0.363 Sum_probs=27.8
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecC
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVE 279 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~ 279 (538)
-.|+|||||.+|+-+|..|++.+.+ |+++++.
T Consensus 4 ~DVvIIGgGi~G~~~A~~La~~G~~---V~llE~~ 35 (501)
T 2qcu_A 4 KDLIVIGGGINGAGIAADAAGRGLS---VLMLEAQ 35 (501)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCC---EEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCC---EEEEECC
Confidence 3799999999999999999987655 8888874
No 339
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=96.72 E-value=0.00078 Score=73.28 Aligned_cols=46 Identities=7% Similarity=-0.038 Sum_probs=34.5
Q ss_pred CCcccCCCCCEEEccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHCCC
Q 009310 400 ETLCVKGHPRIFALGDSSALRDSSGRPLPATAQVAFQQADFAGWNLWAAINDR 452 (538)
Q Consensus 400 ~~l~~~~~~~VfaiGD~~~~~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l~~~ 452 (538)
...+| +.|++||+|||+... .-..+.++..+|++++.++...+.+.
T Consensus 446 ~~~~t-~v~gl~a~Ge~~~~~------~hg~~~~sl~~g~~ag~~a~~~~~~~ 491 (662)
T 3gyx_A 446 YNRMT-TVEGLWTCADGVGAS------GHKFSSGSHAEGRIVGKQMVRWYLDH 491 (662)
T ss_dssp CTTBC-SSBTEECCSSSBCSC------CCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCC-ccCCeEeCccccccc------cCccHhHHHHHHHHHHHHHHHHHhhC
Confidence 45677 899999999998641 12236778888999999988877543
No 340
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=96.68 E-value=0.0015 Score=66.23 Aligned_cols=34 Identities=18% Similarity=0.412 Sum_probs=29.4
Q ss_pred eEEEECCChhHHHHHHHHHHH--HHhcCcEEEEecCCcc
Q 009310 246 RVAVVGCGYSGVELAATVSER--LEEKGIVQAINVETTI 282 (538)
Q Consensus 246 ~VvVVGgG~~g~E~A~~l~~~--~~~~~~Vtlv~~~~~~ 282 (538)
+|+|||||+.|+.+|..|++. +.+ |+++++.+.+
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~---V~v~E~~~~~ 37 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWA---IDIVEKNDEQ 37 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSE---EEEECSSCTT
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCC---EEEEECCCCC
Confidence 799999999999999999987 655 9999986543
No 341
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.67 E-value=0.0011 Score=72.24 Aligned_cols=42 Identities=29% Similarity=0.455 Sum_probs=33.2
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccC--CCCCCEEEEEcCCC-Cc
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQ--DDKKPQVLLVDQSE-RF 120 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~--~~~g~~V~lie~~~-~~ 120 (538)
.++|+|||||++||+||+.|++.+.+ ...+++|+|+|+++ ++
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 47899999999999999999984310 00128999999998 76
No 342
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=96.66 E-value=0.0011 Score=72.07 Aligned_cols=36 Identities=33% Similarity=0.510 Sum_probs=31.0
Q ss_pred CCCeEEEECCcHHHHHHHHHhh---hcccCCCCCCEEEEEcCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLE---SLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~---~~~~~~~~g~~V~lie~~~ 118 (538)
..+||||||||+|||+||..|+ +. .|.+|+||||.+
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~-----~G~~V~vlEK~~ 59 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKL-----GGLKVTLVEKAA 59 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTT-----TTCCEEEECSSC
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhh-----CCCeEEEEeCcC
Confidence 3479999999999999999998 30 477999999976
No 343
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=96.66 E-value=0.0011 Score=70.62 Aligned_cols=37 Identities=30% Similarity=0.438 Sum_probs=32.9
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 77 ~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
...+|+||||+|++|+.+|.+|++ .|++|+|+|++..
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~------~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSE------AGKKVLLLERGGP 41 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHh------CCCeEEEEeCCCC
Confidence 355899999999999999999999 6889999999864
No 344
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=96.60 E-value=0.0089 Score=67.01 Aligned_cols=33 Identities=21% Similarity=0.411 Sum_probs=28.9
Q ss_pred CeEEEECCChhHHHHHHHHHHHHH-hcCcEEEEecCC
Q 009310 245 IRVAVVGCGYSGVELAATVSERLE-EKGIVQAINVET 280 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~-~~~~Vtlv~~~~ 280 (538)
.+|+|||||.+|+-+|..|++.+. + |+++++..
T Consensus 5 ~dVvIIGgGi~Gls~A~~La~~G~~~---V~vlE~~~ 38 (830)
T 1pj5_A 5 PRIVIIGAGIVGTNLADELVTRGWNN---ITVLDQGP 38 (830)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCC---EEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCc---EEEEeCCC
Confidence 489999999999999999998765 4 99998764
No 345
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=96.60 E-value=0.0011 Score=70.40 Aligned_cols=56 Identities=13% Similarity=0.062 Sum_probs=40.1
Q ss_pred CCCeeeCCCcccCCCCCEEEccccccc-cCCCCCCCCccHHHHHHHHHHHHHHHHHHH
Q 009310 393 RGQAETDETLCVKGHPRIFALGDSSAL-RDSSGRPLPATAQVAFQQADFAGWNLWAAI 449 (538)
Q Consensus 393 ~G~i~vd~~l~~~~~~~VfaiGD~~~~-~~~~~~~~~~~~~~A~~qg~~aa~~i~~~l 449 (538)
.|.|.||...|+ ..|++||+|+|+.. .....+.-......++-.|+.++++++..+
T Consensus 354 ~GGi~vd~~~~t-~I~GLyAaGE~a~~g~hGanrl~gnsl~~~~vfG~~Ag~~aa~~~ 410 (540)
T 1chu_A 354 CGGVMVDDHGRT-DVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRRM 410 (540)
T ss_dssp SCEEECCTTCBC-SSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCcEEECCCCCC-ccCCEEeccccccccccCCCcCcchhHHHHHHHHHHHHHHHHHhc
Confidence 478999999997 89999999999842 111111112345567788999999988764
No 346
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.59 E-value=0.0018 Score=70.69 Aligned_cols=40 Identities=25% Similarity=0.346 Sum_probs=31.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
..+|+||||||+||++|..|++... ...|++|+|||+.+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~-~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVR-QKPDLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHH-HSTTCCEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhcccc-ccCCCCEEEEeCCCC
Confidence 3699999999999999999988100 003679999999764
No 347
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=96.54 E-value=0.013 Score=62.19 Aligned_cols=33 Identities=18% Similarity=0.318 Sum_probs=27.9
Q ss_pred CCeEEEECCChhHHHHHHHHHH---HHHhcCcEEEEecC
Q 009310 244 LIRVAVVGCGYSGVELAATVSE---RLEEKGIVQAINVE 279 (538)
Q Consensus 244 ~~~VvVVGgG~~g~E~A~~l~~---~~~~~~~Vtlv~~~ 279 (538)
..+|+|||||.+|.-+|..|++ .+.+ |+++++.
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~---V~liE~~ 40 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQAN---ITLIESA 40 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCE---EEEEECS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCE---EEEECCC
Confidence 3589999999999999999988 4443 9999874
No 348
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=96.51 E-value=0.015 Score=61.77 Aligned_cols=33 Identities=21% Similarity=0.293 Sum_probs=28.5
Q ss_pred eEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCc
Q 009310 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT 281 (538)
Q Consensus 246 ~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~ 281 (538)
.|+|||+|++|+-+|..|++.+.+ |+++++.+.
T Consensus 28 dVlIVGaGpaGl~~A~~La~~G~~---V~vlEr~~~ 60 (549)
T 2r0c_A 28 DVLILGGGPVGMALALDLAHRQVG---HLVVEQTDG 60 (549)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC---EEEECSSCS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCC---EEEEeCCCC
Confidence 799999999999999999987655 888887644
No 349
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.45 E-value=0.0058 Score=63.44 Aligned_cols=33 Identities=30% Similarity=0.368 Sum_probs=30.7
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
.+|+|+|+|-.|...|..|.. .|++|++||+++
T Consensus 4 M~iiI~G~G~vG~~la~~L~~------~~~~v~vId~d~ 36 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVG------ENNDITIVDKDG 36 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCS------TTEEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHH------CCCCEEEEECCH
Confidence 589999999999999999987 789999999986
No 350
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.39 E-value=0.0019 Score=68.34 Aligned_cols=37 Identities=38% Similarity=0.591 Sum_probs=32.5
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
..+|+||||||+||+.+|.+|++ +++++|+|+|+++.
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse-----~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSE-----DPDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTT-----STTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHh-----CCCCeEEEEcCCCC
Confidence 35899999999999999999987 36889999999864
No 351
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=96.39 E-value=0.0099 Score=64.51 Aligned_cols=32 Identities=28% Similarity=0.462 Sum_probs=27.0
Q ss_pred eEEEECCChhHHHHHHHHHH-HHHhcCcEEEEecCC
Q 009310 246 RVAVVGCGYSGVELAATVSE-RLEEKGIVQAINVET 280 (538)
Q Consensus 246 ~VvVVGgG~~g~E~A~~l~~-~~~~~~~Vtlv~~~~ 280 (538)
.|+|||+|++|+-+|..|++ .+.+ |+++++.+
T Consensus 34 dVlIVGaGpaGL~~A~~La~~~G~~---V~viEr~~ 66 (639)
T 2dkh_A 34 DVLIVGCGPAGLTLAAQLAAFPDIR---TCIVEQKE 66 (639)
T ss_dssp EEEEECCSHHHHHHHHHHTTCTTSC---EEEECSSS
T ss_pred cEEEECcCHHHHHHHHHHHHhCCCC---EEEEeCCC
Confidence 79999999999999999988 6654 77777643
No 352
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=96.38 E-value=0.0079 Score=62.74 Aligned_cols=31 Identities=16% Similarity=0.355 Sum_probs=27.0
Q ss_pred eEEEECCChhHHHHHHHHHHHHHhcCcEEEEecC
Q 009310 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVE 279 (538)
Q Consensus 246 ~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~ 279 (538)
.|+|||+|..|+-+|..+++.+.+ |+++++.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~---V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKK---VTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCC---EEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCC---EEEEeCC
Confidence 389999999999999999886654 9999875
No 353
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=96.29 E-value=0.025 Score=60.18 Aligned_cols=37 Identities=16% Similarity=0.294 Sum_probs=28.4
Q ss_pred CCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCC
Q 009310 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVET 280 (538)
Q Consensus 244 ~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~ 280 (538)
..+|+|||||+.|.-+|..|++.......|++|++.+
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 4589999999999999999998431112399998753
No 354
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.20 E-value=0.003 Score=67.59 Aligned_cols=36 Identities=33% Similarity=0.551 Sum_probs=32.5
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
..+|+||||||.||+.+|.+|.+ +++++|+|||+.+
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse-----~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTE-----NPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTT-----STTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHh-----CCCCcEEEEecCC
Confidence 45899999999999999999986 3689999999987
No 355
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.14 E-value=0.027 Score=59.18 Aligned_cols=115 Identities=12% Similarity=0.112 Sum_probs=71.1
Q ss_pred eEEEECCChhHHHHHHHHHHHHHh-----------cCcEEEEecCCcc-------CCCC---------------------
Q 009310 246 RVAVVGCGYSGVELAATVSERLEE-----------KGIVQAINVETTI-------CPTG--------------------- 286 (538)
Q Consensus 246 ~VvVVGgG~~g~E~A~~l~~~~~~-----------~~~Vtlv~~~~~~-------l~~~--------------------- 286 (538)
.|+|||+|++|+-+|..|.+.+.. .....++++.+.+ ++..
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s~~s 120 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRSSFT 120 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTCTTS
T ss_pred cEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCCccc
Confidence 699999999999999999876532 1125566664422 1110
Q ss_pred ---------------------C--hhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCc
Q 009310 287 ---------------------T--PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDK 343 (538)
Q Consensus 287 ---------------------~--~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (538)
+ .++.+++....++.+..+.+++.|++++...... .....+.
T Consensus 121 f~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~---------------~~~~~~~ 185 (501)
T 4b63_A 121 FLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDP---------------SSSVVDF 185 (501)
T ss_dssp HHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSST---------------TSSCBCE
T ss_pred hHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccc---------------cccccce
Confidence 0 1344555555566777899999999997643110 0000023
Q ss_pred eEEeecccccCCcceEEeccEEEEecCCCCCCC
Q 009310 344 YILELQPAIKGLESQIFEADLVLWTVGSKPLLP 376 (538)
Q Consensus 344 v~~~~~~~~~~~~g~~l~~D~vI~a~G~~p~~~ 376 (538)
.+++..+.+.+ ..+++.++.||+|+|..|+.+
T Consensus 186 ~~V~~~~~~~g-~~~~~~ar~vVlatG~~P~iP 217 (501)
T 4b63_A 186 FTVRSRNVETG-EISARRTRKVVIAIGGTAKMP 217 (501)
T ss_dssp EEEEEEETTTC-CEEEEEEEEEEECCCCEECCC
T ss_pred EEEEEecCCCc-eEEEEEeCEEEECcCCCCCCC
Confidence 45544332222 456789999999999888755
No 356
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.13 E-value=0.0034 Score=67.10 Aligned_cols=37 Identities=30% Similarity=0.346 Sum_probs=32.3
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
..+|+||||||.||+.+|.+|++. .+++|+|||+.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~-----~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAEN-----PNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTS-----TTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhC-----CCCcEEEEecCCC
Confidence 348999999999999999999982 4479999999875
No 357
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=96.11 E-value=0.022 Score=58.86 Aligned_cols=35 Identities=17% Similarity=0.387 Sum_probs=30.3
Q ss_pred CeEEEECCChhHHHHHHHHHHHH------HhcCcEEEEecCCcc
Q 009310 245 IRVAVVGCGYSGVELAATVSERL------EEKGIVQAINVETTI 282 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~------~~~~~Vtlv~~~~~~ 282 (538)
.+|+|||||.+|+-+|..|++.+ .+ |+++++.+++
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~---V~vlEa~~~~ 46 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIKEKNLPLE---LTLVEASPRV 46 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTTTCSEE---EEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCCC---EEEEECCCCC
Confidence 58999999999999999999988 55 9999886544
No 358
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.07 E-value=0.0041 Score=64.51 Aligned_cols=35 Identities=20% Similarity=0.166 Sum_probs=31.9
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
..++|.|||.|.+|+++|..|.+ .|++|++.|.++
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~------~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAK------LGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHH------TTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHh------CCCEEEEEeCCc
Confidence 35899999999999999999998 789999999875
No 359
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=96.05 E-value=0.017 Score=62.11 Aligned_cols=32 Identities=22% Similarity=0.341 Sum_probs=27.8
Q ss_pred eEEEECCChhHHHHHHHHHHHH--HhcCcEEEEecCC
Q 009310 246 RVAVVGCGYSGVELAATVSERL--EEKGIVQAINVET 280 (538)
Q Consensus 246 ~VvVVGgG~~g~E~A~~l~~~~--~~~~~Vtlv~~~~ 280 (538)
.|+|||+|..|+-+|..+++.+ .+ |+++++..
T Consensus 7 DVvIVG~G~AGl~aAl~la~~G~~~~---V~vlEk~~ 40 (602)
T 1kf6_A 7 DLAIVGAGGAGLRAAIAAAQANPNAK---IALISKVY 40 (602)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTCC---EEEEESSC
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCc---EEEEeCCC
Confidence 7999999999999999999876 44 99998753
No 360
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=96.00 E-value=0.028 Score=60.01 Aligned_cols=32 Identities=16% Similarity=0.341 Sum_probs=27.9
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecC
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVE 279 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~ 279 (538)
..|+|||||.+|+-+|..|++.+.+ |+++++.
T Consensus 33 ~DVvVIGgGi~G~~~A~~La~rG~~---V~LlE~~ 64 (571)
T 2rgh_A 33 LDLLIIGGGITGAGVAVQAAASGIK---TGLIEMQ 64 (571)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCC---EEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCc---EEEEeCC
Confidence 4899999999999999999987655 8888864
No 361
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=95.88 E-value=0.0061 Score=64.20 Aligned_cols=38 Identities=24% Similarity=0.480 Sum_probs=33.7
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCc
Q 009310 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (538)
Q Consensus 77 ~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~ 120 (538)
...+|++|||+|++|+.+|.+|.+ .+.+|+|||++...
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~------~~~~v~~~e~~~~~ 46 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQ------AGIPTQIVEMGRSW 46 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSCCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHH------CCCcEEEEECCCCC
Confidence 345899999999999999999998 68899999998753
No 362
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=95.82 E-value=0.044 Score=56.41 Aligned_cols=31 Identities=23% Similarity=0.288 Sum_probs=27.9
Q ss_pred CeEEEECCChhHHHHHHHHHHHH-HhcCcEEEEec
Q 009310 245 IRVAVVGCGYSGVELAATVSERL-EEKGIVQAINV 278 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~-~~~~~Vtlv~~ 278 (538)
.+|+|||+|.+|+-+|..|++.+ .+ |+++++
T Consensus 24 ~dVvIIGgGiaGls~A~~La~~G~~~---V~vlE~ 55 (448)
T 3axb_A 24 FDYVVVGAGVVGLAAAYYLKVWSGGS---VLVVDA 55 (448)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCSC---EEEEES
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCc---EEEEcc
Confidence 37999999999999999999987 54 999987
No 363
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.80 E-value=0.011 Score=50.34 Aligned_cols=39 Identities=13% Similarity=0.130 Sum_probs=33.9
Q ss_pred CCCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 75 PDKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 75 ~~~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
+...+.+|+|+|+|.-|...|..|.+ .|++|+++|+++.
T Consensus 3 ~~~~~~~viIiG~G~~G~~la~~L~~------~g~~v~vid~~~~ 41 (140)
T 3fwz_A 3 AVDICNHALLVGYGRVGSLLGEKLLA------SDIPLVVIETSRT 41 (140)
T ss_dssp CCCCCSCEEEECCSHHHHHHHHHHHH------TTCCEEEEESCHH
T ss_pred cccCCCCEEEECcCHHHHHHHHHHHH------CCCCEEEEECCHH
Confidence 44566799999999999999999998 6889999998753
No 364
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=95.77 E-value=0.047 Score=57.32 Aligned_cols=32 Identities=22% Similarity=0.251 Sum_probs=26.2
Q ss_pred CeEEEECCChhHHHHHHHHHH---HHHhcCcEEEEecC
Q 009310 245 IRVAVVGCGYSGVELAATVSE---RLEEKGIVQAINVE 279 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~---~~~~~~~Vtlv~~~ 279 (538)
.+|+|||||.+|.-+|..|++ .+.+ |+++++.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~---V~lvE~~ 37 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRID---VTLVESG 37 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSE---EEEEEC-
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCE---EEEEecC
Confidence 489999999999999999998 4443 8888764
No 365
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=95.74 E-value=0.0061 Score=64.17 Aligned_cols=37 Identities=24% Similarity=0.445 Sum_probs=33.1
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcc
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFV 121 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~ 121 (538)
.+|++|||+|++|+.+|..|++ .+.+|+|||++..+.
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~------~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGE------AGVQTLMLEMGQLWN 41 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHh------CCCcEEEEeCCCCCC
Confidence 4799999999999999999998 678999999987544
No 366
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.72 E-value=0.013 Score=54.21 Aligned_cols=36 Identities=14% Similarity=0.164 Sum_probs=31.7
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 77 ~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
-..++|+|||||..|...+..|.+ .|.+|+||+++.
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~------~GA~VtVvap~~ 64 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQ------EGAAITVVAPTV 64 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGG------GCCCEEEECSSC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHH------CCCEEEEECCCC
Confidence 355899999999999999999998 678999999753
No 367
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=95.71 E-value=0.046 Score=59.49 Aligned_cols=31 Identities=32% Similarity=0.401 Sum_probs=26.1
Q ss_pred eEEEECCChhHHHHHHHHHH-----HHHhcCcEEEEecC
Q 009310 246 RVAVVGCGYSGVELAATVSE-----RLEEKGIVQAINVE 279 (538)
Q Consensus 246 ~VvVVGgG~~g~E~A~~l~~-----~~~~~~~Vtlv~~~ 279 (538)
.|+|||+|++|+-+|..|++ .+.+ |+++++.
T Consensus 10 dVlIVGaGpaGL~lA~~La~~~~~~~Gi~---v~viE~~ 45 (665)
T 1pn0_A 10 DVLIVGAGPAGLMAARVLSEYVRQKPDLK---VRIIDKR 45 (665)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHSTTCC---EEEECSS
T ss_pred cEEEECcCHHHHHHHHHHhccccccCCCC---EEEEeCC
Confidence 79999999999999999998 5544 7777764
No 368
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=95.62 E-value=0.0062 Score=64.93 Aligned_cols=37 Identities=24% Similarity=0.312 Sum_probs=32.8
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCc
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~ 120 (538)
.+|+||||||.||+.+|.+|++ +++++|+|||+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse-----~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTE-----DPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTT-----STTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHh-----CcCCcEEEEecCCcc
Confidence 3799999999999999999987 378999999998754
No 369
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=95.40 E-value=0.071 Score=58.92 Aligned_cols=36 Identities=19% Similarity=0.278 Sum_probs=30.5
Q ss_pred CCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCcc
Q 009310 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTI 282 (538)
Q Consensus 244 ~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~ 282 (538)
..+|+|||+|.+|+-+|..|++.+.+ |+++++.+.+
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g~~---v~v~E~~~~~ 371 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFGIK---VTVLEAKDRI 371 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCE---EEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCc---EEEEecccce
Confidence 36899999999999999999988765 9999875543
No 370
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=95.26 E-value=0.012 Score=62.57 Aligned_cols=38 Identities=26% Similarity=0.304 Sum_probs=33.1
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCc
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~ 120 (538)
+.+|++|||+|++|+.+|.+|++. ++.+|+|+|++...
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~-----~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSED-----PAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTS-----TTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-----CCCCEEEEecCCcC
Confidence 458999999999999999999982 47899999998653
No 371
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=95.25 E-value=0.0084 Score=63.62 Aligned_cols=35 Identities=29% Similarity=0.382 Sum_probs=31.2
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
..+|+||||||+||+.+|.+|++ +.+|+|+|+.+.
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-------g~~VlvLEaG~~ 59 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-------KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-------TSCEEEECSSBC
T ss_pred CcccEEEECccHHHHHHHHHHhc-------CCcEEEEecCCC
Confidence 44899999999999999999986 459999999875
No 372
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.21 E-value=0.014 Score=49.59 Aligned_cols=34 Identities=24% Similarity=0.330 Sum_probs=30.8
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
+++|+|+|+|.-|...|..|.+ .|++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~------~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTA------AGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH------TTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHH------CCCeEEEEECCH
Confidence 4689999999999999999998 688999999864
No 373
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=95.10 E-value=0.13 Score=55.16 Aligned_cols=31 Identities=19% Similarity=0.308 Sum_probs=27.1
Q ss_pred eEEEECCChhHHHHHHHHHHHHHhcCcEEEEecC
Q 009310 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVE 279 (538)
Q Consensus 246 ~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~ 279 (538)
.|+|||+|..|+-+|..+++.+.+ |.++++.
T Consensus 9 DVvVVGaG~AGl~AA~~la~~G~~---V~vlEK~ 39 (588)
T 2wdq_A 9 DAVVIGAGGAGMRAALQISQSGQT---CALLSKV 39 (588)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC---EEEEESS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCc---EEEEecC
Confidence 799999999999999999887654 8888875
No 374
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.09 E-value=0.03 Score=55.23 Aligned_cols=36 Identities=19% Similarity=-0.039 Sum_probs=30.8
Q ss_pred CCCeEEEECCcHHHHH-HHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 78 KKPRICILGGGFGGLY-TALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~-aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
..++|.|||.|.+||+ +|..|.+ .|++|++.|.++.
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~------~G~~V~~~D~~~~ 39 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKE------AGFEVSGCDAKMY 39 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHH------TTCEEEEEESSCC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHh------CCCEEEEEcCCCC
Confidence 3479999999999997 7788877 7899999998754
No 375
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.06 E-value=0.025 Score=49.03 Aligned_cols=36 Identities=33% Similarity=0.318 Sum_probs=31.7
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
...+|+|||+|.-|..+|..|.+ .|++|+++|+++.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~------~g~~V~vid~~~~ 53 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASS------SGHSVVVVDKNEY 53 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESCGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHh------CCCeEEEEECCHH
Confidence 34789999999999999999988 6789999998753
No 376
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=94.97 E-value=0.016 Score=62.25 Aligned_cols=38 Identities=32% Similarity=0.433 Sum_probs=33.3
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCc
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERF 120 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~ 120 (538)
..+|++|||+|++|+.+|.+|++ +.+.+|+|||++...
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~-----~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTE-----NPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHT-----STTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHh-----CCCCcEEEEecCCcc
Confidence 45899999999999999999987 268899999998754
No 377
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.97 E-value=0.024 Score=46.14 Aligned_cols=34 Identities=26% Similarity=0.385 Sum_probs=30.2
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCC-CEEEEEcCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKK-PQVLLVDQSE 118 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g-~~V~lie~~~ 118 (538)
.++|+|+|+|..|..++..|.+ .| ++|+++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~------~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKT------SSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH------CSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHh------CCCceEEEEeCCH
Confidence 4689999999999999999988 56 8999999864
No 378
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.81 E-value=0.031 Score=48.28 Aligned_cols=34 Identities=18% Similarity=0.283 Sum_probs=30.7
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
+++|+|+|+|..|...|..|.+ .|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~------~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQ------RGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH------TTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHH------CCCCEEEEECCC
Confidence 4689999999999999999988 688999999864
No 379
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=94.74 E-value=0.056 Score=57.28 Aligned_cols=33 Identities=21% Similarity=0.423 Sum_probs=28.2
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCc
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT 281 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~ 281 (538)
-.|+|||+|..|+-+|..+++ +.+ |.++++...
T Consensus 9 ~DVvVVG~G~AGl~aAl~la~-G~~---V~vlEk~~~ 41 (540)
T 1chu_A 9 CDVLIIGSGAAGLSLALRLAD-QHQ---VIVLSKGPV 41 (540)
T ss_dssp CSEEEECCSHHHHHHHHHHTT-TSC---EEEECSSCT
T ss_pred CCEEEECccHHHHHHHHHHhc-CCc---EEEEECCCC
Confidence 379999999999999999988 654 999988653
No 380
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.50 E-value=0.04 Score=46.36 Aligned_cols=33 Identities=30% Similarity=0.305 Sum_probs=29.9
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
++|+|||+|..|...|..|.+ .|++|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~------~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSE------KGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHh------CCCeEEEEECCH
Confidence 589999999999999999988 678999999864
No 381
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=94.26 E-value=0.027 Score=52.61 Aligned_cols=34 Identities=18% Similarity=0.359 Sum_probs=30.6
Q ss_pred eEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCcc
Q 009310 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTI 282 (538)
Q Consensus 246 ~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~ 282 (538)
.|+|||+|++|+-+|..|++.+.+ |+++++.+.+
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~---V~v~Ek~~~~ 37 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQ---VHLFDKSRGS 37 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCC---EEEEECCCCC
Confidence 699999999999999999998776 9999987654
No 382
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=94.18 E-value=0.13 Score=55.22 Aligned_cols=31 Identities=26% Similarity=0.250 Sum_probs=27.1
Q ss_pred eEEEECCChhHHHHHHHHHHHHHhcCcEEEEecC
Q 009310 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVE 279 (538)
Q Consensus 246 ~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~ 279 (538)
.|+|||+|..|+-+|..+++.+.+ |.++++.
T Consensus 20 DVvVVG~G~AGl~AAl~aa~~G~~---V~vlEK~ 50 (621)
T 2h88_A 20 DAVVVGAGGAGLRAAFGLSEAGFN---TACVTKL 50 (621)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC---EEEEESS
T ss_pred CEEEECccHHHHHHHHHHHHCCCc---EEEEecc
Confidence 799999999999999999887655 8888874
No 383
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.95 E-value=0.069 Score=55.19 Aligned_cols=55 Identities=18% Similarity=0.126 Sum_probs=42.8
Q ss_pred CCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEEcCc
Q 009310 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGY 309 (538)
Q Consensus 244 ~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~ 309 (538)
+++|.|||.|.+|+-+|..|.+.+.+ |+..+....- .....+.|++.||++..+.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~---V~~~D~~~~~--------~~~~~~~L~~~gi~~~~g~ 63 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAI---VTVNDGKPFD--------ENPTAQSLLEEGIKVVCGS 63 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCE---EEEEESSCGG--------GCHHHHHHHHTTCEEEESC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCE---EEEEeCCccc--------CChHHHHHHhCCCEEEECC
Confidence 68999999999999999999888776 9998875421 1123457888999998764
No 384
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=93.77 E-value=0.087 Score=54.46 Aligned_cols=35 Identities=17% Similarity=0.085 Sum_probs=31.4
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
..++|+|||||..|...+..|.+ .|.+|++++++.
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~------~ga~V~vi~~~~ 45 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLE------AGARLTVNALTF 45 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHH------TTBEEEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHh------CcCEEEEEcCCC
Confidence 34799999999999999999998 788999999864
No 385
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=93.72 E-value=0.051 Score=45.90 Aligned_cols=34 Identities=26% Similarity=0.264 Sum_probs=30.2
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
.++|+|+|+|..|...|..|.+ .|++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~------~g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHR------MGHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH------TTCCCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHH------CCCEEEEEeCCH
Confidence 3689999999999999999988 678999999864
No 386
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=93.54 E-value=0.096 Score=51.53 Aligned_cols=52 Identities=23% Similarity=0.254 Sum_probs=40.6
Q ss_pred CCeEEEECCChhHHH-HHHHHHHHHHhcCcEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEEcC
Q 009310 244 LIRVAVVGCGYSGVE-LAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLG 308 (538)
Q Consensus 244 ~~~VvVVGgG~~g~E-~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~ 308 (538)
.++|.|||.|.+|+. +|..|.+.+.+ |+..+.... +. ..+.|++.||+++.+
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~---V~~~D~~~~------~~----~~~~L~~~gi~v~~g 56 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFE---VSGCDAKMY------PP----MSTQLEALGIDVYEG 56 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCE---EEEEESSCC------TT----HHHHHHHTTCEEEES
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCE---EEEEcCCCC------cH----HHHHHHhCCCEEECC
Confidence 579999999999997 78888887776 999887643 11 235678889998865
No 387
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=93.36 E-value=0.049 Score=56.11 Aligned_cols=35 Identities=17% Similarity=0.203 Sum_probs=31.5
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
.++|+|||.|.+||++|..|.+ +|++|+++|.++.
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~------~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLA------RGVTPRVMDTRMT 39 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHT------TTCCCEEEESSSS
T ss_pred CCEEEEEeecHHHHHHHHHHHh------CCCEEEEEECCCC
Confidence 4789999999999999999987 7899999998764
No 388
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=93.21 E-value=0.083 Score=56.71 Aligned_cols=41 Identities=17% Similarity=0.172 Sum_probs=36.1
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCCcccC
Q 009310 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSERFVFK 123 (538)
Q Consensus 77 ~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~~~~~ 123 (538)
.+.+||+|||+|..|...|..|++ .|.+|++||++++++..
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~------~g~~vl~id~~~~~gg~ 46 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSR------SGQRVLHVDSRSYYGGN 46 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCGG
T ss_pred CCcCCEEEECCcHHHHHHHHHHHh------CCCEEEEEcCCCcccCc
Confidence 346999999999999999999999 67899999999986543
No 389
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.15 E-value=0.076 Score=47.26 Aligned_cols=35 Identities=23% Similarity=0.188 Sum_probs=31.0
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCC-CCEEEEEcCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDK-KPQVLLVDQSE 118 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~-g~~V~lie~~~ 118 (538)
...+|+|||+|..|..+|..|.+ . |++|+++|+++
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~------~~g~~V~vid~~~ 73 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRA------RYGKISLGIEIRE 73 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHH------HHCSCEEEEESCH
T ss_pred CCCcEEEECCCHHHHHHHHHHHh------ccCCeEEEEECCH
Confidence 34689999999999999999988 6 78999999875
No 390
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=92.94 E-value=0.057 Score=51.54 Aligned_cols=35 Identities=31% Similarity=0.422 Sum_probs=31.5
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
..++|+|||||-.|...+..|.+ .|++|+||+++.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~------~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMP------TGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGG------GTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHh------CCCEEEEEcCCC
Confidence 45899999999999999999998 688999999864
No 391
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=92.89 E-value=0.11 Score=47.91 Aligned_cols=51 Identities=10% Similarity=0.010 Sum_probs=37.2
Q ss_pred CCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEEc
Q 009310 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVL 307 (538)
Q Consensus 244 ~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~ 307 (538)
+++|+|||||.+|...+..|.+.+.+ |+++.+.. .++ +.+..++.+|+++.
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~---VtVvap~~------~~~----l~~l~~~~~i~~i~ 81 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAA---ITVVAPTV------SAE----INEWEAKGQLRVKR 81 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCC---EEEECSSC------CHH----HHHHHHTTSCEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCE---EEEECCCC------CHH----HHHHHHcCCcEEEE
Confidence 68999999999999999999887665 99987632 233 34444555677653
No 392
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=92.71 E-value=0.23 Score=51.67 Aligned_cols=59 Identities=15% Similarity=0.214 Sum_probs=44.8
Q ss_pred CCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCCC------------------hhhHHHHHHHHHhCCCEE
Q 009310 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGT------------------PGNREAALKVLSARKVQL 305 (538)
Q Consensus 244 ~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~------------------~~~~~~~~~~l~~~gV~v 305 (538)
..+|+|||+|.+|+.+|..|.+.+.+ |+++++.+++..... ......+.+.+++.|+++
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g~~---v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~ 109 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAGHQ---VTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLRL 109 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHTCE---EEEECSSSSSBTTCCEEEETTTTEEEESSCCCEETTCHHHHHHHHHTTCCE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCe---EEEEECCCCCCCceeeeccCCCCchhhcCcccccchHHHHHHHHHHhCCCc
Confidence 57899999999999999999988765 999999876654320 011355677888888764
No 393
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=92.58 E-value=0.12 Score=50.62 Aligned_cols=66 Identities=18% Similarity=0.067 Sum_probs=45.8
Q ss_pred CeEEEECCChhHHHHHHHHHHH--HHhcCcEEEEecCCccCCCC-------C-hhhHHHHHHHHHhCCCEEEcCceeeE
Q 009310 245 IRVAVVGCGYSGVELAATVSER--LEEKGIVQAINVETTICPTG-------T-PGNREAALKVLSARKVQLVLGYFVRC 313 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~--~~~~~~Vtlv~~~~~~l~~~-------~-~~~~~~~~~~l~~~gV~v~~~~~V~~ 313 (538)
..|+|||+|+.|+-+|..|++. +.+ |+++++.+.+...+ + ..+...+.+.+++.||++..+.....
T Consensus 66 ~DV~IIGaGPAGlsAA~~la~~r~G~~---V~viEk~~~~GG~~~~~~~~~~~~~l~~~~~~~~~e~Gv~~~~~~~~~~ 141 (326)
T 3fpz_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLK---VCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVV 141 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSC---EEEECSSSSCCTTTTCCSTTCCCEEEETTTHHHHHHTTCCCEECSSEEE
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCCCe---EEEEECCCCCCceEEeCCccCCHHHHHHHHHHHHHHcCCEEEECCccee
Confidence 4799999999999999999764 334 99999876543211 1 12233445667888998887755443
No 394
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=92.51 E-value=0.4 Score=51.86 Aligned_cols=32 Identities=19% Similarity=0.330 Sum_probs=26.4
Q ss_pred eEEEECCChhHHHHHHHHH---H-HHHhcCcEEEEecCC
Q 009310 246 RVAVVGCGYSGVELAATVS---E-RLEEKGIVQAINVET 280 (538)
Q Consensus 246 ~VvVVGgG~~g~E~A~~l~---~-~~~~~~~Vtlv~~~~ 280 (538)
.|+|||+|..|+-+|..++ + .+.+ |.++++..
T Consensus 24 DVvVIG~G~AGl~AAl~aa~~~~~~G~~---V~vlEK~~ 59 (643)
T 1jnr_A 24 DILIIGGGFSGCGAAYEAAYWAKLGGLK---VTLVEKAA 59 (643)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHTTTTCC---EEEECSSC
T ss_pred CEEEECcCHHHHHHHHHHhhhhhhCCCe---EEEEeCcC
Confidence 7999999999999999998 3 4433 88988754
No 395
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=92.25 E-value=0.14 Score=51.55 Aligned_cols=36 Identities=19% Similarity=0.273 Sum_probs=31.7
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
...+|+|||+|.+|+.+|..|.. .|.+|+++|+++.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~------lGa~V~v~D~~~~ 224 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARR------LGAVVSATDVRPA 224 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHH------CCCEEEEEcCCHH
Confidence 34799999999999999999988 5779999998764
No 396
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=92.24 E-value=0.16 Score=49.35 Aligned_cols=35 Identities=31% Similarity=0.452 Sum_probs=31.3
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
.++|.|||+|.-|...|..|++ .|++|+++|+++.
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~------~G~~V~~~d~~~~ 49 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAA------TGHTVVLVDQTED 49 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHh------CCCeEEEEECCHH
Confidence 3689999999999999999998 6889999998753
No 397
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=91.95 E-value=0.12 Score=47.44 Aligned_cols=32 Identities=25% Similarity=0.493 Sum_probs=29.6
Q ss_pred eEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 81 RICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 81 ~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
+|+|+|+|.-|...|..|.+ .|++|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~------~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLS------RKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHH------TTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHh------CCCeEEEEECCH
Confidence 79999999999999999998 688999999865
No 398
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=91.89 E-value=0.074 Score=55.52 Aligned_cols=34 Identities=21% Similarity=0.337 Sum_probs=29.1
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCc
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETT 281 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~ 281 (538)
|+|+|||+|..|+-+|..|++.+.+ |+++|+.++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~---V~VlEa~~~ 35 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIP---VLLLEQRDK 35 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCC---EEEECCC--
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCc---EEEEccCCC
Confidence 6899999999999999999988776 999987654
No 399
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=91.54 E-value=0.13 Score=50.25 Aligned_cols=36 Identities=28% Similarity=0.280 Sum_probs=31.1
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
...+|.|||+|.-|-.-|..++. .|++|+|+|.++.
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~------~G~~V~l~D~~~~ 40 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFAS------GGFRVKLYDIEPR 40 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHH------TTCCEEEECSCHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHh------CCCeEEEEECCHH
Confidence 34799999999999999999998 7889999998763
No 400
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=91.52 E-value=0.18 Score=49.41 Aligned_cols=34 Identities=24% Similarity=0.292 Sum_probs=30.3
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
+.+|.|||+|.-|...|..|++ .|++|+++++++
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~------~g~~V~~~~r~~ 35 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAK------TGHCVSVVSRSD 35 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHH------TTCEEEEECSTT
T ss_pred CCEEEEECcCHHHHHHHHHHHh------CCCeEEEEeCCh
Confidence 3689999999999999999998 688999999864
No 401
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=91.37 E-value=0.2 Score=48.77 Aligned_cols=38 Identities=16% Similarity=0.159 Sum_probs=32.9
Q ss_pred CCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 76 DKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 76 ~~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
...+++|.|||.|.-|...|..|.+ .|++|+++|+++.
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~------~G~~V~~~dr~~~ 55 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLK------NGFKVTVWNRTLS 55 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSGG
T ss_pred cccCCEEEEECccHHHHHHHHHHHH------CCCeEEEEeCCHH
Confidence 3445799999999999999999998 6889999998753
No 402
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=91.29 E-value=0.15 Score=50.85 Aligned_cols=35 Identities=20% Similarity=0.183 Sum_probs=30.9
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
...+|+|||+|..|+.+|..|.. .|.+|+++|+++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~------lGa~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKR------LGAKTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHH------HTCEEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHH------CCCEEEEEeCCH
Confidence 34799999999999999999988 467999999875
No 403
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=91.26 E-value=0.23 Score=47.69 Aligned_cols=35 Identities=20% Similarity=0.177 Sum_probs=31.5
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
.++|.|||+|.-|...|..|++ .|++|+++|+++.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~------~G~~V~l~d~~~~ 38 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAF------HGFAVTAYDINTD 38 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSHH
T ss_pred CCEEEEECCCHHHHHHHHHHHh------CCCeEEEEeCCHH
Confidence 4799999999999999999998 6889999998763
No 404
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=91.08 E-value=0.21 Score=49.72 Aligned_cols=35 Identities=29% Similarity=0.526 Sum_probs=31.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
+|+|+|||||.-|..+++.+++ .|++|+++|.++.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~------~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKK------AGMKVVLVDKNPQ 35 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHH------CCCEEEEEeCCCC
Confidence 4799999999999999999988 6889999998764
No 405
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=90.85 E-value=0.23 Score=45.98 Aligned_cols=36 Identities=19% Similarity=0.253 Sum_probs=31.0
Q ss_pred CCCCeEEEECC-cHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 77 KKKPRICILGG-GFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 77 ~~~~~VVIIGg-G~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
-+.++|+|.|| |.-|...+..|.+ .|++|+++++++
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~------~G~~V~~~~R~~ 55 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKN------KGHEPVAMVRNE 55 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHH------TTCEEEEEESSG
T ss_pred cCCCeEEEECCCChHHHHHHHHHHh------CCCeEEEEECCh
Confidence 34579999998 9999999999998 788999999864
No 406
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=90.83 E-value=0.25 Score=50.47 Aligned_cols=39 Identities=18% Similarity=0.214 Sum_probs=33.9
Q ss_pred CCCCCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 74 WPDKKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 74 ~~~~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
+....+.+|.|||.|+.||..|..|++ .|++|+.+|-++
T Consensus 16 p~~~~m~~IaViGlGYVGLp~A~~~A~------~G~~V~g~Did~ 54 (444)
T 3vtf_A 16 PRGSHMASLSVLGLGYVGVVHAVGFAL------LGHRVVGYDVNP 54 (444)
T ss_dssp CTTCCCCEEEEECCSHHHHHHHHHHHH------HTCEEEEECSCH
T ss_pred CCCCCCCEEEEEccCHHHHHHHHHHHh------CCCcEEEEECCH
Confidence 444566899999999999999999998 688999999875
No 407
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=90.80 E-value=0.17 Score=49.59 Aligned_cols=35 Identities=29% Similarity=0.292 Sum_probs=31.2
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
.++|.|||+|.-|...|..|++ .|++|+++|+++.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~------~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFAS------GGFRVKLYDIEPR 40 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH------TTCCEEEECSCHH
T ss_pred CceEEEEeeCHHHHHHHHHHHH------CCCEEEEEeCCHH
Confidence 4789999999999999999998 6889999999764
No 408
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=90.78 E-value=0.17 Score=43.06 Aligned_cols=34 Identities=15% Similarity=0.153 Sum_probs=30.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
.++|+|||+|..|...|..|.+ .|++|++++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~------~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSY------PQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCT------TTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHh------CCCEEEEEcCCH
Confidence 4799999999999999999987 677899999864
No 409
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=90.74 E-value=0.2 Score=50.04 Aligned_cols=35 Identities=29% Similarity=0.403 Sum_probs=30.5
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCC-EEEEEcCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSE 118 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~~ 118 (538)
...+|||+|||.||+.+|..|..+ |. +|+++|++.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~------Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAA------GATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHH------TCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHc------CCCeEEEEECCC
Confidence 347999999999999999999884 45 999999974
No 410
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=90.58 E-value=0.23 Score=47.34 Aligned_cols=35 Identities=9% Similarity=0.132 Sum_probs=30.7
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
++++|+|.|+|+-|-..+..|.+ .|++|+++++++
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~------~g~~V~~~~r~~ 38 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAP------QGWRIIGTSRNP 38 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGG------GTCEEEEEESCG
T ss_pred CcCcEEEECCcHHHHHHHHHHHH------CCCEEEEEEcCh
Confidence 44799999999999999999988 688999998864
No 411
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=90.44 E-value=0.28 Score=48.32 Aligned_cols=34 Identities=18% Similarity=0.287 Sum_probs=30.2
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCC-EEEEEcCCCC
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSER 119 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~~~ 119 (538)
.+|+|||+|..|.+.|..|+. .|+ +|+|+|.++.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~------~g~~~V~L~D~~~~ 44 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCAL------RELADVVLYDVVKG 44 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------HTCCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHh------CCCCeEEEEECChh
Confidence 589999999999999999998 566 8999998753
No 412
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=90.32 E-value=0.26 Score=50.78 Aligned_cols=33 Identities=24% Similarity=0.361 Sum_probs=30.7
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
.+|.|||.|..|+..|..|++ .|++|+++|+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~------~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAE------LGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHh------cCCEEEEEECCH
Confidence 589999999999999999998 688999999875
No 413
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=90.23 E-value=0.3 Score=47.97 Aligned_cols=36 Identities=33% Similarity=0.397 Sum_probs=31.1
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCC-EEEEEcCCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSER 119 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~~~ 119 (538)
++.+|.|||+|..|...|..|+. .|+ +|+|+|.++.
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~------~g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQ------KDLGDVYMFDIIEG 49 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH------TTCCEEEEECSSTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHh------CCCCeEEEEECCHH
Confidence 33699999999999999999988 567 8999998753
No 414
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=90.21 E-value=0.28 Score=47.90 Aligned_cols=33 Identities=18% Similarity=0.375 Sum_probs=30.0
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCC--EEEEEcCCC
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQDDKKP--QVLLVDQSE 118 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~--~V~lie~~~ 118 (538)
.+|+|||+|..|...|..|.+ .|+ +|+++|+++
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~------~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQ------RGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHh------CCCCCEEEEEeCCh
Confidence 589999999999999999988 677 999999874
No 415
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=90.21 E-value=0.17 Score=53.24 Aligned_cols=37 Identities=19% Similarity=0.241 Sum_probs=29.1
Q ss_pred CCeEEEECCChhHHHHHHHHHHHHH---------hcCcEEEEecCC
Q 009310 244 LIRVAVVGCGYSGVELAATVSERLE---------EKGIVQAINVET 280 (538)
Q Consensus 244 ~~~VvVVGgG~~g~E~A~~l~~~~~---------~~~~Vtlv~~~~ 280 (538)
..+|+|||||++|.-+|..|++... ..-.|+++++.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 3589999999999999999988431 112399999854
No 416
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=90.12 E-value=0.28 Score=49.70 Aligned_cols=35 Identities=20% Similarity=0.283 Sum_probs=30.8
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
..+|+|||+|.+|+.+|..|.. .|.+|+++|++..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~------~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANS------LGAIVRAFDTRPE 206 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHH------CCCEEEEEcCCHH
Confidence 4799999999999999999988 5679999998753
No 417
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=90.03 E-value=0.2 Score=48.78 Aligned_cols=33 Identities=30% Similarity=0.440 Sum_probs=29.4
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
++|.|||+|.-|.+.|..|.+ .|++|+++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~------~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQR------SGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHH------TSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHH------CCCeEEEEEcCc
Confidence 689999999999999999998 678999999864
No 418
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=89.88 E-value=0.26 Score=49.09 Aligned_cols=34 Identities=24% Similarity=0.296 Sum_probs=30.1
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCC-EEEEEcCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQS 117 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~ 117 (538)
...+|||+|+|-+|..+|..|... |. +|+++|++
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~------G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDL------GVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH------TCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhC------CCCeEEEEECC
Confidence 447999999999999999999884 44 89999997
No 419
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=89.83 E-value=0.3 Score=47.28 Aligned_cols=33 Identities=30% Similarity=0.342 Sum_probs=30.1
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
.+|.|||+|.-|...|..|.+ .|++|+++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~------~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQ------GGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHh------CCCcEEEEECCH
Confidence 589999999999999999998 688999999864
No 420
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=89.76 E-value=0.34 Score=48.79 Aligned_cols=36 Identities=19% Similarity=0.290 Sum_probs=31.2
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
...+|+|||+|.+|+.++..+.. .|.+|+++|+++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~------~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKR------LGAVVMATDVRAA 206 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCST
T ss_pred CCCEEEEECCCHHHHHHHHHHHH------CCCEEEEEeCCHH
Confidence 45799999999999999999988 5678999998753
No 421
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=89.71 E-value=0.37 Score=43.94 Aligned_cols=36 Identities=19% Similarity=0.215 Sum_probs=30.8
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
...+|.|||+|.-|.+.|..|.+ .|++|+++++++.
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~------~g~~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEI------AGHEVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHH------TTCEEEEECTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH------CCCEEEEEcCCHH
Confidence 34689999999999999999998 6789999998754
No 422
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=89.70 E-value=0.31 Score=47.64 Aligned_cols=35 Identities=26% Similarity=0.367 Sum_probs=30.6
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCC-EEEEEcCCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSER 119 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~~~ 119 (538)
+.+|.|||+|..|...|..|++ .|+ +|+++|.++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~------~g~~~V~l~D~~~~ 39 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGK------DNLADVVLFDIAEG 39 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------HTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh------CCCceEEEEeCCch
Confidence 3689999999999999999988 566 8999998753
No 423
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=89.65 E-value=0.39 Score=50.10 Aligned_cols=51 Identities=16% Similarity=0.272 Sum_probs=39.6
Q ss_pred CCeEEEECCChhHHH-HHHHHHHHHHhcCcEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEEcC
Q 009310 244 LIRVAVVGCGYSGVE-LAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLG 308 (538)
Q Consensus 244 ~~~VvVVGgG~~g~E-~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~ 308 (538)
.++|.|||-|-+|+- +|..|.+.+.+ |+..+.... + ..+.|++.||++..+
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~G~~---V~~~D~~~~------~-----~~~~l~~~gi~~~~g 73 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANEGYQ---ISGSDLAPN------S-----VTQHLTALGAQIYFH 73 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTTCE---EEEECSSCC------H-----HHHHHHHTTCEEESS
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhCCCe---EEEEECCCC------H-----HHHHHHHCCCEEECC
Confidence 579999999999996 78888887776 888775431 1 235688899999876
No 424
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=89.58 E-value=0.33 Score=50.69 Aligned_cols=35 Identities=23% Similarity=0.159 Sum_probs=29.9
Q ss_pred CCCeEEEECCcHHHHH-HHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 78 KKPRICILGGGFGGLY-TALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~-aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
..++|.|||.|-+||+ +|..|.+ .|++|++.|.+.
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~------~G~~V~~~D~~~ 56 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLAN------EGYQISGSDLAP 56 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHH------TTCEEEEECSSC
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHh------CCCeEEEEECCC
Confidence 3479999999999997 6888888 788999999763
No 425
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=89.36 E-value=0.24 Score=50.28 Aligned_cols=35 Identities=26% Similarity=0.421 Sum_probs=30.7
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCcc
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTI 282 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~ 282 (538)
++|+|||+|.+|+-+|..|++.+.+ |+++++.+.+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~---V~vlE~~~~~ 35 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHE---IIVLEKSAMI 35 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCE---EEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCe---EEEEeCCCCC
Confidence 3799999999999999999987655 9999997665
No 426
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=89.27 E-value=0.42 Score=46.83 Aligned_cols=35 Identities=29% Similarity=0.394 Sum_probs=30.3
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCC-EEEEEcCCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSER 119 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~~~ 119 (538)
..+|.|||+|..|...|..|+. .|+ +|+|+|.++.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~------~g~~~v~L~Di~~~ 39 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQ------KNLGDVVLFDIVKN 39 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh------CCCCeEEEEeCCHH
Confidence 3689999999999999999998 566 8999998753
No 427
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=89.08 E-value=0.4 Score=46.65 Aligned_cols=33 Identities=39% Similarity=0.593 Sum_probs=29.1
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCC-EEEEEcCCC
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSE 118 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~~ 118 (538)
.+|+|||+|..|...|..|+. .|+ +|+++|.++
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~------~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAA------KELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHH------CCCCeEEEEeCCc
Confidence 689999999999999999987 454 899999865
No 428
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=89.07 E-value=0.4 Score=47.82 Aligned_cols=34 Identities=29% Similarity=0.331 Sum_probs=30.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
.++|+|+|+|.+|+.++..|+. .|.+|+++|+++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~------~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVG------LGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHh------CCCEEEEEeCCH
Confidence 3799999999999999999988 567999999874
No 429
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=88.99 E-value=0.4 Score=45.80 Aligned_cols=33 Identities=21% Similarity=0.109 Sum_probs=30.1
Q ss_pred eEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 81 RICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 81 ~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
+|.|||+|.-|...|..|.+ .|++|+++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~------~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCK------QGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHH------TTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHh------CCCCEEEEEcCcc
Confidence 79999999999999999998 6889999998754
No 430
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=88.93 E-value=0.37 Score=49.86 Aligned_cols=35 Identities=23% Similarity=0.342 Sum_probs=31.8
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCC-CC-EEEEEcCCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDK-KP-QVLLVDQSER 119 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~-g~-~V~lie~~~~ 119 (538)
..+|.|||+|.-|+..|..|++ . |+ +|+++|+++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~------~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFAD------APCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHH------STTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHH------hCCCCeEEEEECChh
Confidence 3689999999999999999998 6 89 9999999764
No 431
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=88.81 E-value=0.66 Score=48.11 Aligned_cols=56 Identities=16% Similarity=0.144 Sum_probs=44.6
Q ss_pred hhhHHHHHHHHHhCC-CEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEE
Q 009310 288 PGNREAALKVLSARK-VQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVL 366 (538)
Q Consensus 288 ~~~~~~~~~~l~~~g-V~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI 366 (538)
..+.+.+.+.+++.| ++|++++.|++|..++ +++.+... +|+.+.+|.||
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~-----------------------~~v~v~~~------~g~~~~ad~vI 305 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNER-----------------------DAARVTAR------DGREFVAKRVV 305 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEECS-----------------------SSEEEEET------TCCEEEEEEEE
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEcC-----------------------CEEEEEEC------CCCEEEcCEEE
Confidence 456677788888888 9999999999998654 45666542 56789999999
Q ss_pred EecCCC
Q 009310 367 WTVGSK 372 (538)
Q Consensus 367 ~a~G~~ 372 (538)
+|+|..
T Consensus 306 ~a~~~~ 311 (495)
T 2vvm_A 306 CTIPLN 311 (495)
T ss_dssp ECCCGG
T ss_pred ECCCHH
Confidence 999964
No 432
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=88.63 E-value=0.28 Score=49.76 Aligned_cols=34 Identities=26% Similarity=0.363 Sum_probs=30.4
Q ss_pred eEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCcc
Q 009310 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTI 282 (538)
Q Consensus 246 ~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~ 282 (538)
+|+|||+|.+|+-+|..|++.+.+ |+++++.+.+
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~---V~vlE~~~~~ 35 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKAGHE---VEVFERLPIT 35 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCE---EEEECSSSSS
T ss_pred cEEEECCCHHHHHHHHHHHhCCCc---eEEEeCCCCC
Confidence 799999999999999999987755 9999997665
No 433
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=88.55 E-value=0.47 Score=44.37 Aligned_cols=37 Identities=22% Similarity=0.205 Sum_probs=31.7
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 77 ~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
...++|.|||+|.-|.+.|..|.+ .|++|+++++++.
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~------~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALAD------LGHEVTIGTRDPK 53 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESCHH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHH------CCCEEEEEeCChh
Confidence 455899999999999999999998 6889999998753
No 434
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=88.48 E-value=0.49 Score=46.31 Aligned_cols=35 Identities=29% Similarity=0.357 Sum_probs=30.5
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCC-EEEEEcCCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSER 119 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~~~ 119 (538)
..+|.|||+|..|.+.|..|+. .++ +|+|+|.++.
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~------~~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGL------KELGDVVLFDIAEG 42 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh------CCCCeEEEEeCCch
Confidence 4699999999999999999988 455 9999998764
No 435
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=88.45 E-value=0.42 Score=49.55 Aligned_cols=34 Identities=26% Similarity=0.353 Sum_probs=31.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
..+|.|||.|+-|+..|..|++ .|++|+++|+++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~------~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLAD------IGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHh------CCCEEEEEECCH
Confidence 3699999999999999999998 788999999875
No 436
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=88.37 E-value=0.45 Score=47.07 Aligned_cols=33 Identities=33% Similarity=0.294 Sum_probs=30.0
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
.+|.|||+|..|...|..|.+ .|++|+++++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~------~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLAL------KGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHh------CCCEEEEEeCCH
Confidence 589999999999999999988 678999999864
No 437
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=88.35 E-value=0.38 Score=50.10 Aligned_cols=35 Identities=20% Similarity=0.284 Sum_probs=29.0
Q ss_pred CeEEEECCChhHHHHHHHHHHH-HHhcCcEEEEecCCcc
Q 009310 245 IRVAVVGCGYSGVELAATVSER-LEEKGIVQAINVETTI 282 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~-~~~~~~Vtlv~~~~~~ 282 (538)
-.|+|||+|.+|+-+|..|++. +.+ |++++..+++
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~~G~~---V~VlE~~~~~ 46 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQIDGPS---WMIVDSNETP 46 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCCSC---EEEEESSSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhhCCCC---EEEEECCCCC
Confidence 3699999999999999999875 444 9999986654
No 438
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=88.34 E-value=0.43 Score=47.04 Aligned_cols=32 Identities=28% Similarity=0.455 Sum_probs=28.4
Q ss_pred eEEEECCChhHHHHHHHHHHHH------HhcCcEEEEecCC
Q 009310 246 RVAVVGCGYSGVELAATVSERL------EEKGIVQAINVET 280 (538)
Q Consensus 246 ~VvVVGgG~~g~E~A~~l~~~~------~~~~~Vtlv~~~~ 280 (538)
.|+|||+|.+|+-+|..|++.+ .+ |+++++..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~---V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLD---IKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCE---EEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCce---EEEEECCC
Confidence 7999999999999999999987 33 99999864
No 439
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=88.26 E-value=0.28 Score=50.18 Aligned_cols=33 Identities=21% Similarity=0.376 Sum_probs=30.0
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCC
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVET 280 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~ 280 (538)
++|+|||||++|+-+|..|++.+.+ |+++++.+
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G~~---V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHDVD---VTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCE---EEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCe---EEEEcCCC
Confidence 5899999999999999999998776 99999865
No 440
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=88.23 E-value=0.37 Score=46.56 Aligned_cols=35 Identities=20% Similarity=0.134 Sum_probs=31.5
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
+++|.|||.|.-|...|..|++ .|++|+++|+++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~------~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTE------WPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTT------STTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHH------CCCeEEEEeCCHH
Confidence 4689999999999999999998 6889999998764
No 441
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=88.20 E-value=0.4 Score=45.08 Aligned_cols=34 Identities=26% Similarity=0.247 Sum_probs=29.9
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCC-EEEEEcCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSE 118 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~~ 118 (538)
.++|+|||+|-.|..+|..|++. |. +++|+|++.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~------Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASA------GVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHH------TCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHc------CCCeEEEEcCCC
Confidence 36999999999999999999994 54 899999875
No 442
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=88.18 E-value=0.46 Score=46.08 Aligned_cols=33 Identities=30% Similarity=0.547 Sum_probs=29.4
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCC--EEEEEcCCC
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQDDKKP--QVLLVDQSE 118 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~--~V~lie~~~ 118 (538)
.+|+|||+|..|.+.|..|+. .|+ +|+++|.++
T Consensus 1 mkI~VIGaG~vG~~la~~la~------~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVL------RGSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHh------CCCCCEEEEEeCCH
Confidence 379999999999999999988 567 999999864
No 443
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=88.12 E-value=0.34 Score=47.81 Aligned_cols=35 Identities=26% Similarity=0.392 Sum_probs=30.3
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCcc
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTI 282 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~ 282 (538)
.+|+|||+|.+|+-+|..|++.+.+ |+++++.+.+
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~---V~vlE~~~~~ 39 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHE---VLVAEAAEGI 39 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCe---EEEEeCCCCC
Confidence 3799999999999999999987665 9999997543
No 444
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=87.82 E-value=0.67 Score=47.60 Aligned_cols=36 Identities=25% Similarity=0.349 Sum_probs=32.4
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
..++|.|||+|.-|...|..|++ .|++|+++|+++.
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~------aG~~V~l~D~~~e 88 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGL------AGIETFLVVRNEQ 88 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHH------CCCeEEEEECcHH
Confidence 44799999999999999999998 7889999999865
No 445
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=87.77 E-value=0.54 Score=46.98 Aligned_cols=34 Identities=29% Similarity=0.348 Sum_probs=30.6
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
.++|+|+|+|..|..+|..|+. .|++|+++|+++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~------~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALG------MGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHh------CCCEEEEEECCH
Confidence 4799999999999999999988 678999999864
No 446
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=87.77 E-value=0.68 Score=44.67 Aligned_cols=35 Identities=23% Similarity=0.245 Sum_probs=30.9
Q ss_pred CCCeEEEEC-CcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 78 KKPRICILG-GGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 78 ~~~~VVIIG-gG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
+.++|.||| .|.-|.+.|..|.+ .|++|+++++++
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~------~G~~V~~~~~~~ 55 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRA------SGYPISILDRED 55 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHT------TTCCEEEECTTC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHh------CCCeEEEEECCc
Confidence 346899999 99999999999988 678999999865
No 447
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=87.73 E-value=0.39 Score=48.70 Aligned_cols=36 Identities=14% Similarity=0.295 Sum_probs=31.1
Q ss_pred CCeEEEECCChhHHHHHHHHHHHH-HhcCcEEEEecCCcc
Q 009310 244 LIRVAVVGCGYSGVELAATVSERL-EEKGIVQAINVETTI 282 (538)
Q Consensus 244 ~~~VvVVGgG~~g~E~A~~l~~~~-~~~~~Vtlv~~~~~~ 282 (538)
..+|+|||+|.+|+-+|..|++.+ .+ |+++++.+++
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~~---v~v~E~~~~~ 42 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHD---YTILERTDHV 42 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCC---EEEECSSSCS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCc---EEEEECCCCC
Confidence 468999999999999999998876 44 9999987665
No 448
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=87.73 E-value=0.54 Score=45.95 Aligned_cols=34 Identities=24% Similarity=0.598 Sum_probs=29.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCC--EEEEEcCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP--QVLLVDQSE 118 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~--~V~lie~~~ 118 (538)
+.||+|||+|..|.+.|..|.. .++ +|+++|.++
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~------~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMAL------RQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH------TTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHh------CCCCCEEEEEeCCh
Confidence 4699999999999999999988 344 999999864
No 449
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=87.70 E-value=0.59 Score=45.47 Aligned_cols=35 Identities=31% Similarity=0.477 Sum_probs=30.2
Q ss_pred eEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 81 RICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 81 ~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
+|.|||+|..|...|..|++. ..+++|+++|.++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~----~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEK----QLARELVLLDVVEG 36 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT----TCCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC----CCCCEEEEEeCChh
Confidence 799999999999999999873 14789999999754
No 450
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=87.70 E-value=0.7 Score=42.07 Aligned_cols=35 Identities=20% Similarity=0.128 Sum_probs=30.0
Q ss_pred CCCeEEEECC-cHHHHHHHHHhh-hcccCCCCCCEEEEEcCCC
Q 009310 78 KKPRICILGG-GFGGLYTALRLE-SLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 78 ~~~~VVIIGg-G~AGl~aA~~L~-~~~~~~~~g~~V~lie~~~ 118 (538)
++++|+|.|| |.-|.+.+..|. + .|++|+++++++
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~------~g~~V~~~~r~~ 40 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTY------TDMHITLYGRQL 40 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHH------CCCEEEEEESSH
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhc------CCceEEEEecCc
Confidence 3467999995 999999999999 6 789999999863
No 451
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=87.69 E-value=0.28 Score=47.28 Aligned_cols=34 Identities=24% Similarity=0.388 Sum_probs=29.9
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
+.+|.|||+|.-|...|..|.+ .|++|++++++.
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~------~g~~V~~~~r~~ 35 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQ------SLPHTTLIGRHA 35 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH------HCTTCEEEESSC
T ss_pred CcEEEEECCCHHHHHHHHHHHH------CCCeEEEEEecc
Confidence 3689999999999999999998 577999999874
No 452
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=87.56 E-value=0.49 Score=46.54 Aligned_cols=32 Identities=31% Similarity=0.541 Sum_probs=29.5
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCC
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQS 117 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~ 117 (538)
.+|.|||+|.-|...|..|++ .|++|++++++
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~------~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLAL------AGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHH------TTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHH------CCCEEEEEECh
Confidence 589999999999999999998 67899999974
No 453
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=87.49 E-value=0.57 Score=45.30 Aligned_cols=34 Identities=18% Similarity=0.033 Sum_probs=30.9
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
+++|.|||.|.-|...|..|.+ .|++|+++|+++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~------~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLR------AGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHH------CCCeEEEEECCH
Confidence 4689999999999999999998 688999999875
No 454
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=87.49 E-value=0.55 Score=46.14 Aligned_cols=35 Identities=26% Similarity=0.313 Sum_probs=31.0
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
+..+|.|||+|.-|...|..|.+ .|++|+++++++
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~------~G~~V~~~~r~~ 47 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHE------NGEEVILWARRK 47 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSH
T ss_pred cCCcEEEECcCHHHHHHHHHHHh------CCCeEEEEeCCH
Confidence 44799999999999999999998 788999999864
No 455
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=87.48 E-value=0.33 Score=44.97 Aligned_cols=35 Identities=17% Similarity=0.172 Sum_probs=29.5
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
..++|+|+|+|..|...|..|.+ .|+ |+++|+++.
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~------~g~-v~vid~~~~ 42 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRG------SEV-FVLAEDENV 42 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTT------SEE-EEEESCGGG
T ss_pred CCCEEEEECCChHHHHHHHHHHh------CCe-EEEEECCHH
Confidence 44789999999999999999987 678 999998653
No 456
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=87.38 E-value=0.17 Score=52.02 Aligned_cols=52 Identities=21% Similarity=0.262 Sum_probs=38.0
Q ss_pred CCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEEcCc
Q 009310 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLGY 309 (538)
Q Consensus 244 ~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~ 309 (538)
+++|+|||.|.+|+..|..|.+.+.+ |+..+..... +.. ..|+ .|+++..+.
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~---v~~~D~~~~~-----~~~-----~~l~-~G~~~~~g~ 56 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVT---PRVMDTRMTP-----PGL-----DKLP-EAVERHTGS 56 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCC---CEEEESSSSC-----TTG-----GGSC-TTSCEEESS
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCE---EEEEECCCCc-----chh-----HHhh-CCCEEEECC
Confidence 57999999999999999888877665 8888875532 111 3355 688877654
No 457
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=87.37 E-value=0.63 Score=45.35 Aligned_cols=34 Identities=35% Similarity=0.651 Sum_probs=30.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCC-EEEEEcCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSE 118 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~~ 118 (538)
.++|.|||+|..|.+.|..|+. .++ +|+++|.++
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~------~g~~~v~l~D~~~ 42 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQ------KELADVVLVDIPQ 42 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCCEEEEECCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHh------CCCCeEEEEeccc
Confidence 4799999999999999999988 567 999999873
No 458
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=87.26 E-value=0.66 Score=47.91 Aligned_cols=35 Identities=20% Similarity=0.232 Sum_probs=31.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
.++|.|||+|.-|...|..|++ .|++|+++|+++.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~------~G~~V~l~D~~~~ 71 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFAR------VGISVVAVESDPK 71 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT------TTCEEEEECSSHH
T ss_pred CCEEEEECcCHHHHHHHHHHHh------CCCeEEEEECCHH
Confidence 4689999999999999999998 7889999998763
No 459
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=87.25 E-value=0.37 Score=48.95 Aligned_cols=34 Identities=24% Similarity=0.382 Sum_probs=30.1
Q ss_pred eEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCcc
Q 009310 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTI 282 (538)
Q Consensus 246 ~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~ 282 (538)
+|+|||+|.+|+-+|..|++.+.+ |+++++.+++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~---V~vlE~~~~~ 36 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKK---VLLLEGGERL 36 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCC---EEEECSSSSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCe---EEEEecCCCc
Confidence 799999999999999999988765 9999986654
No 460
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=87.22 E-value=0.75 Score=44.85 Aligned_cols=36 Identities=25% Similarity=0.307 Sum_probs=31.1
Q ss_pred CCCCeEEEECC-cHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 77 KKKPRICILGG-GFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 77 ~~~~~VVIIGg-G~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
...++|+|.|| |+-|...+..|.+ .|++|++++++.
T Consensus 18 ~~~~~vlVTGasG~iG~~l~~~L~~------~g~~V~~~~r~~ 54 (330)
T 2pzm_A 18 GSHMRILITGGAGCLGSNLIEHWLP------QGHEILVIDNFA 54 (330)
T ss_dssp TTCCEEEEETTTSHHHHHHHHHHGG------GTCEEEEEECCS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHH------CCCEEEEEECCC
Confidence 34468999998 9999999999998 678999999864
No 461
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=87.16 E-value=0.57 Score=44.85 Aligned_cols=34 Identities=21% Similarity=0.196 Sum_probs=30.8
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
++|.|||.|.-|...|..|.+ .|++|+++|+++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~------~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVK------AGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHH------CCCeEEEEcCCHH
Confidence 589999999999999999998 6889999998753
No 462
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=87.16 E-value=0.59 Score=44.49 Aligned_cols=35 Identities=31% Similarity=0.292 Sum_probs=31.1
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
+++|+|.|+|+-|-..+..|.+ .|++|++++++..
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~------~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTA------QGHEVTGLRRSAQ 37 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH------TTCCEEEEECTTS
T ss_pred CCcEEEECCCHHHHHHHHHHHH------CCCEEEEEeCCcc
Confidence 3689999999999999999998 6889999998753
No 463
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=87.15 E-value=0.54 Score=48.19 Aligned_cols=35 Identities=29% Similarity=0.498 Sum_probs=31.9
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
..++.|||.|+-|+..|..|++ .|++|+++|+++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~------~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSD------FGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHH------CCCEEEEEeCCHH
Confidence 3689999999999999999999 7899999999864
No 464
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=87.13 E-value=0.51 Score=45.75 Aligned_cols=34 Identities=32% Similarity=0.531 Sum_probs=29.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCC--EEEEEcCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP--QVLLVDQSE 118 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~--~V~lie~~~ 118 (538)
.++|.|||+|..|...|..|.. .++ +|+|+|.++
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~------~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISA------KGIADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------HTCCSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHh------cCCCCEEEEEcCCc
Confidence 3799999999999999999987 456 999999875
No 465
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=87.10 E-value=0.65 Score=44.16 Aligned_cols=35 Identities=23% Similarity=0.198 Sum_probs=30.6
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
..++++|+|+|-+|.++|..|.+ .|.+|++++++.
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~------~G~~V~v~~R~~ 152 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLS------LDCAVTITNRTV 152 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHH------cCCEEEEEECCH
Confidence 34789999999999999999998 567999998764
No 466
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=87.07 E-value=0.41 Score=47.83 Aligned_cols=99 Identities=14% Similarity=0.060 Sum_probs=71.1
Q ss_pred eEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCC--------------------C----------------CC--
Q 009310 246 RVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICP--------------------T----------------GT-- 287 (538)
Q Consensus 246 ~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~--------------------~----------------~~-- 287 (538)
.|+|||||++|+-+|..|++.+.+ |+++++.+.+.. . ..
T Consensus 6 dVvIvG~G~aGl~~A~~La~~G~~---V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 82 (397)
T 3cgv_A 6 DVLVVGGGPGGSTAARYAAKYGLK---TLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKR 82 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCC---EEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCE
Confidence 799999999999999999987665 999998653211 0 00
Q ss_pred -------------------hhhHHHHHHHHHhCCCEEEcCceeeEEeccccccccccCCCCCcccccccccCCCceE-Ee
Q 009310 288 -------------------PGNREAALKVLSARKVQLVLGYFVRCIRRVGEFEASVKQPESGAIPNIAADKNSDKYI-LE 347 (538)
Q Consensus 288 -------------------~~~~~~~~~~l~~~gV~v~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~ 347 (538)
..+...+.+.+++.|++++.+++|+++..++ +.++ +.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-----------------------~~v~gv~ 139 (397)
T 3cgv_A 83 PIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN-----------------------GKVAGAK 139 (397)
T ss_dssp CEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET-----------------------TEEEEEE
T ss_pred EEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeC-----------------------CEEEEEE
Confidence 0122445566777899999999999988754 3333 33
Q ss_pred ecccccCCcceEEeccEEEEecCCCC
Q 009310 348 LQPAIKGLESQIFEADLVLWTVGSKP 373 (538)
Q Consensus 348 ~~~~~~~~~g~~l~~D~vI~a~G~~p 373 (538)
+. ..+++.++.+|.||.|.|...
T Consensus 140 ~~---~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 140 IR---HNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp EE---ETTEEEEEEEEEEEECCCTTC
T ss_pred EE---ECCeEEEEEcCEEEECCCcch
Confidence 22 223677899999999999865
No 467
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=87.01 E-value=0.52 Score=47.86 Aligned_cols=35 Identities=26% Similarity=0.223 Sum_probs=31.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
..+|+|||.|..|...|..|.+ .|++|++||+++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~------~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLS------SGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH------TTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHH------CCCCEEEEECCHH
Confidence 3589999999999999999998 6889999999863
No 468
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=87.00 E-value=0.6 Score=42.58 Aligned_cols=35 Identities=20% Similarity=0.227 Sum_probs=30.8
Q ss_pred CCeEEEECC-cHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 79 KPRICILGG-GFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 79 ~~~VVIIGg-G~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
+++|+|.|| |+-|...+..|.+ .|++|+++++++.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~------~g~~V~~~~r~~~ 39 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALN------RGFEVTAVVRHPE 39 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHT------TTCEEEEECSCGG
T ss_pred CCEEEEEcCCchHHHHHHHHHHH------CCCEEEEEEcCcc
Confidence 368999996 9999999999998 6889999999753
No 469
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=86.93 E-value=0.58 Score=45.71 Aligned_cols=35 Identities=26% Similarity=0.248 Sum_probs=31.3
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
..++|.|||.|.-|...|..|.+ .|++|+++|+++
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~------~G~~V~~~dr~~ 64 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCE------AGYALQVWNRTP 64 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHH------TTCEEEEECSCH
T ss_pred CCCEEEEECccHHHHHHHHHHHh------CCCeEEEEcCCH
Confidence 34699999999999999999998 688999999875
No 470
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=86.76 E-value=0.66 Score=46.47 Aligned_cols=35 Identities=17% Similarity=0.285 Sum_probs=30.9
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
..++|+|||+|..|..+|..++. .|.+|+++|+++
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~------~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANG------MGATVTVLDINI 201 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHh------CCCEEEEEeCCH
Confidence 45799999999999999999988 567999999864
No 471
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=86.69 E-value=0.48 Score=47.43 Aligned_cols=36 Identities=17% Similarity=0.367 Sum_probs=31.2
Q ss_pred CCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecC-Ccc
Q 009310 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVE-TTI 282 (538)
Q Consensus 244 ~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~-~~~ 282 (538)
..+|+|||+|.+|+-+|..|.+.+.+ |+++++. +++
T Consensus 44 ~~~V~IIGAGiaGL~aA~~L~~~G~~---V~VlE~~~~~v 80 (376)
T 2e1m_A 44 PKRILIVGAGIAGLVAGDLLTRAGHD---VTILEANANRV 80 (376)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTSCE---EEEECSCSSCC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCc---EEEEecccccc
Confidence 57999999999999999999887655 9999987 544
No 472
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=86.67 E-value=0.63 Score=46.25 Aligned_cols=34 Identities=38% Similarity=0.352 Sum_probs=30.9
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
..+|.|||+|.-|.+.|..|++ .|++|+++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~------~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLAR------KGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHT------TTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHH------CCCeEEEEeCCH
Confidence 4689999999999999999998 688999999875
No 473
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=86.57 E-value=0.6 Score=42.65 Aligned_cols=34 Identities=26% Similarity=0.287 Sum_probs=29.7
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
..+|.|||+|..|...|..|.+ .|++|++++++.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~------~g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVG------SGFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH------TTCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHH------CCCEEEEEeCCH
Confidence 3689999999999999999988 678999999864
No 474
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=86.57 E-value=0.54 Score=46.11 Aligned_cols=38 Identities=18% Similarity=0.130 Sum_probs=30.1
Q ss_pred CCCCCeEEEECC-cHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 76 DKKKPRICILGG-GFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 76 ~~~~~~VVIIGg-G~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
....++|+|.|| |+-|...+..|.+ .|++|+++++.+.
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~------~G~~V~~~~r~~~ 54 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRT------QGRTVRGFDLRPS 54 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHH------TTCCEEEEESSCC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHh------CCCEEEEEeCCCC
Confidence 345579999999 9999999999998 6889999998754
No 475
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=86.56 E-value=0.58 Score=45.66 Aligned_cols=35 Identities=17% Similarity=0.094 Sum_probs=31.4
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCC-CEEEEEcCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKK-PQVLLVDQSE 118 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g-~~V~lie~~~ 118 (538)
+..+|.|||.|.-|...|..|++ .| ++|+++|+++
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~------~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGG------RNAARLAAYDLRF 58 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT------TTCSEEEEECGGG
T ss_pred cCCeEEEECccHHHHHHHHHHHH------cCCCeEEEEeCCC
Confidence 34789999999999999999998 67 8999999875
No 476
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=86.47 E-value=1.4 Score=36.96 Aligned_cols=50 Identities=26% Similarity=0.292 Sum_probs=37.7
Q ss_pred CCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEEcC
Q 009310 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLVLG 308 (538)
Q Consensus 244 ~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~ 308 (538)
..+|+|+|+|..|..+|..|.+.+.+ |+++++.+. . .+.+++.|+.++.+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~---v~vid~~~~--------~----~~~~~~~g~~~i~g 56 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIP---LVVIETSRT--------R----VDELRERGVRAVLG 56 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCC---EEEEESCHH--------H----HHHHHHTTCEEEES
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC---EEEEECCHH--------H----HHHHHHcCCCEEEC
Confidence 35899999999999999999886655 999988532 1 23455678877654
No 477
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=86.33 E-value=0.81 Score=47.31 Aligned_cols=57 Identities=12% Similarity=-0.069 Sum_probs=42.5
Q ss_pred hhhHHHHHHHHHhCCCEEEcCceeeEEec-cccccccccCCCCCcccccccccCCCceEEeecccccCCcceEEeccEEE
Q 009310 288 PGNREAALKVLSARKVQLVLGYFVRCIRR-VGEFEASVKQPESGAIPNIAADKNSDKYILELQPAIKGLESQIFEADLVL 366 (538)
Q Consensus 288 ~~~~~~~~~~l~~~gV~v~~~~~V~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~l~~D~vI 366 (538)
.++.+.+.+.+++.|+++++++.|++|.. +++.. .+|++. +|+++.||.||
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v--------------------~gV~~~--------~G~~i~Ad~VI 307 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKV--------------------CGIKSS--------DGEIAYCDKVI 307 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCE--------------------EEEEET--------TSCEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeE--------------------EEEEEC--------CCcEEECCEEE
Confidence 57788888999999999999999999976 33100 223332 67789999999
Q ss_pred EecCCC
Q 009310 367 WTVGSK 372 (538)
Q Consensus 367 ~a~G~~ 372 (538)
.++++.
T Consensus 308 ~a~~~~ 313 (475)
T 3p1w_A 308 CDPSYV 313 (475)
T ss_dssp ECGGGC
T ss_pred ECCCcc
Confidence 999988
No 478
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=86.29 E-value=0.8 Score=43.45 Aligned_cols=35 Identities=29% Similarity=0.293 Sum_probs=31.0
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
.++++|||+|-+|-++|..|.+ .|.+|+|++|+..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~------~G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKK------QGLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHH------CCCEEEEEeCCHH
Confidence 6899999999999999999998 5679999988753
No 479
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=86.26 E-value=0.54 Score=48.69 Aligned_cols=37 Identities=22% Similarity=0.171 Sum_probs=31.4
Q ss_pred CCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccC
Q 009310 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTIC 283 (538)
Q Consensus 244 ~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l 283 (538)
..+|+|||+|.+|+-+|..|.+.+.+ |+++++.+++.
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~g~~---v~v~E~~~~~G 47 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKAGYK---VTVLEARTRPG 47 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCC---EEEEeccCCCC
Confidence 46899999999999999999887655 99999876543
No 480
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=86.23 E-value=0.93 Score=45.50 Aligned_cols=37 Identities=24% Similarity=0.321 Sum_probs=32.2
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 77 ~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
...++|+|||+|..|..++..+++ .|++|+++|..+.
T Consensus 12 ~~~k~IlIlG~G~~g~~la~aa~~------~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 12 LPGKTIGIIGGGQLGRMMALAAKE------MGYKIAVLDPTKN 48 (389)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH------cCCEEEEEeCCCC
Confidence 345799999999999999999998 6789999998654
No 481
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=86.12 E-value=0.62 Score=44.92 Aligned_cols=34 Identities=21% Similarity=0.156 Sum_probs=30.8
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
+++|.|||.|.-|...|..|.+ .|++|+++|+++
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~------~G~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLK------AGYLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHH------TTCEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHh------CCCeEEEEcCCH
Confidence 3689999999999999999998 688999999875
No 482
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=86.11 E-value=0.86 Score=40.59 Aligned_cols=33 Identities=24% Similarity=0.326 Sum_probs=30.2
Q ss_pred CeEEEECC-cHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 80 PRICILGG-GFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 80 ~~VVIIGg-G~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
++|+|+|| |.-|...+..|.+ .|++|+++++++
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~------~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQ------AGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH------TTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHH------CCCeEEEEEeCh
Confidence 68999999 9999999999998 688999999875
No 483
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=86.07 E-value=0.93 Score=44.18 Aligned_cols=45 Identities=16% Similarity=0.279 Sum_probs=34.9
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCccCCCCChhhHHHHHHHHHhCCCEEE
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTICPTGTPGNREAALKVLSARKVQLV 306 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~l~~~~~~~~~~~~~~l~~~gV~v~ 306 (538)
.+|.|||+|..|.-+|..|++.+.+ |+++.|.. . +.+++.|+++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~---V~~~~r~~---------~-----~~i~~~Gl~~~ 47 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHC---VSVVSRSD---------Y-----ETVKAKGIRIR 47 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCE---EEEECSTT---------H-----HHHHHHCEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCe---EEEEeCCh---------H-----HHHHhCCcEEe
Confidence 4899999999999999999886655 99988742 1 44566677664
No 484
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=86.01 E-value=0.86 Score=44.50 Aligned_cols=35 Identities=26% Similarity=0.265 Sum_probs=30.1
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCC-EEEEEcCCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSER 119 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~~~ 119 (538)
..+|.|||+|..|.+.|..|+. .++ +++|+|.++.
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~------~~~~~v~l~Di~~~ 40 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALI------KQLGDVVLFDIAQG 40 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh------CCCceEEEEeCChH
Confidence 3699999999999999999988 344 9999998764
No 485
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=85.91 E-value=0.74 Score=44.87 Aligned_cols=37 Identities=24% Similarity=0.450 Sum_probs=30.1
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
+..+|+|||+|..|.+.|..|+..+ ...+|+++|.++
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~----~~~ev~l~Di~~ 41 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQG----IADEIVLIDANE 41 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHT----CCSEEEEECSSH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCC----CCCEEEEEeCCc
Confidence 4479999999999999999998743 234899999864
No 486
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=85.89 E-value=0.53 Score=46.56 Aligned_cols=32 Identities=25% Similarity=0.365 Sum_probs=28.5
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecC
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVE 279 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~ 279 (538)
..|+|||+|.+|+-+|..|++.+.+ |+++++.
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~~G~~---V~vle~~ 38 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILARKGYS---VHILARD 38 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE---EEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCE---EEEEecc
Confidence 4899999999999999999887655 9999975
No 487
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=85.87 E-value=0.82 Score=44.15 Aligned_cols=35 Identities=20% Similarity=0.292 Sum_probs=30.5
Q ss_pred CCCeEEEECCcHHHHHHHHHhhhcccCCCCCC-EEEEEcCCC
Q 009310 78 KKPRICILGGGFGGLYTALRLESLVWQDDKKP-QVLLVDQSE 118 (538)
Q Consensus 78 ~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~-~V~lie~~~ 118 (538)
..++|+|||+|.+|.++|..|.+ .|+ +|++++++.
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~------~G~~~V~v~nR~~ 175 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLS------TAAERIDMANRTV 175 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHT------TTCSEEEEECSSH
T ss_pred CCCEEEEECcHHHHHHHHHHHHH------CCCCEEEEEeCCH
Confidence 34799999999999999999988 576 999999864
No 488
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=85.66 E-value=0.62 Score=47.71 Aligned_cols=32 Identities=38% Similarity=0.452 Sum_probs=29.6
Q ss_pred eEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 81 RICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 81 ~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
+|.|||+|..|+..|..|++ .|++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~la~------~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSA------RGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHH------TTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHH------CCCEEEEEECCH
Confidence 79999999999999999998 688999999875
No 489
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=85.62 E-value=0.5 Score=49.48 Aligned_cols=36 Identities=17% Similarity=0.419 Sum_probs=30.6
Q ss_pred CeEEEECCChhHHHHHHHHHHHH-HhcCcEEEEecCCccC
Q 009310 245 IRVAVVGCGYSGVELAATVSERL-EEKGIVQAINVETTIC 283 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~-~~~~~Vtlv~~~~~~l 283 (538)
.+|+|||+|.+|+-+|..|.+.+ .+ |++++..+++.
T Consensus 9 ~~VvIIGaG~aGL~AA~~L~~~G~~~---V~VlEa~~riG 45 (516)
T 1rsg_A 9 KKVIIIGAGIAGLKAASTLHQNGIQD---CLVLEARDRVG 45 (516)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCS---EEEECSSSSSB
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCC---EEEEeCCCCCC
Confidence 58999999999999999999876 55 99999876543
No 490
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=85.53 E-value=0.75 Score=44.87 Aligned_cols=36 Identities=17% Similarity=0.306 Sum_probs=29.4
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
+.+|+|||+|..|.+.|..|...+ ...++.|+|.++
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~----~~~ei~L~Di~~ 41 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQS----IVDELVIIDLDT 41 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC----SCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC----CCCEEEEEeCCh
Confidence 469999999999999999998732 224899999753
No 491
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=85.51 E-value=0.65 Score=42.86 Aligned_cols=37 Identities=22% Similarity=0.214 Sum_probs=30.9
Q ss_pred CCCCeEEEEC-CcHHHHHHHHHhhhcccCCCCC-CEEEEEcCCCC
Q 009310 77 KKKPRICILG-GGFGGLYTALRLESLVWQDDKK-PQVLLVDQSER 119 (538)
Q Consensus 77 ~~~~~VVIIG-gG~AGl~aA~~L~~~~~~~~~g-~~V~lie~~~~ 119 (538)
.++++|+|.| +|.-|.+.+..|.+ .| ++|+++++++.
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~------~G~~~V~~~~R~~~ 59 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLAD------KQTIKQTLFARQPA 59 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTT------CTTEEEEEEESSGG
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHh------CCCceEEEEEcChh
Confidence 4457899999 49999999999988 67 89999998753
No 492
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=85.29 E-value=0.7 Score=47.96 Aligned_cols=36 Identities=19% Similarity=0.276 Sum_probs=31.1
Q ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 79 KPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 79 ~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
..+|.|||.|..|+..|..|++.+ .|++|+++|+++
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g----~g~~V~~~D~~~ 44 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKC----PHITVTVVDMNT 44 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHC----TTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcC----CCCEEEEEECCH
Confidence 358999999999999999999842 378999999875
No 493
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=85.20 E-value=0.65 Score=48.03 Aligned_cols=35 Identities=29% Similarity=0.503 Sum_probs=30.7
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
.+|.|||.|..|+..|..|++.+ .|++|+++|+++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g----~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMC----PEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHC----TTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcC----CCCEEEEEECCH
Confidence 58999999999999999999842 378999999875
No 494
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=85.15 E-value=0.83 Score=39.14 Aligned_cols=34 Identities=21% Similarity=0.320 Sum_probs=29.3
Q ss_pred CCeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCC
Q 009310 244 LIRVAVVGCGYSGVELAATVSERLEEKGIVQAINVET 280 (538)
Q Consensus 244 ~~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~ 280 (538)
+++|+|+|+|..|..++..|...+.+ |+++++.+
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~---V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHS---VVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCe---EEEEECCH
Confidence 57999999999999999999876654 99998864
No 495
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=85.15 E-value=0.72 Score=44.32 Aligned_cols=33 Identities=15% Similarity=0.199 Sum_probs=29.7
Q ss_pred CeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 80 PRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 80 ~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
.+|.|||+|..|...|..|.+ .|++|+++|+++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~------~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLK------AGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHH------TTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHh------CCCEEEEEeCCH
Confidence 589999999999999999988 678999999864
No 496
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=85.05 E-value=0.87 Score=44.37 Aligned_cols=35 Identities=23% Similarity=0.350 Sum_probs=29.1
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 77 ~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
...++|.|||+|.-|...|..|++ .|++|+++ +++
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~------~G~~V~l~-~~~ 51 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLAR------AGHEVILI-ARP 51 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHH------TTCEEEEE-CCH
T ss_pred ccCCcEEEECcCHHHHHHHHHHHH------CCCeEEEE-EcH
Confidence 345799999999999999999998 68899999 653
No 497
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=85.05 E-value=0.96 Score=40.85 Aligned_cols=32 Identities=19% Similarity=0.289 Sum_probs=29.1
Q ss_pred eEEEECC-cHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 81 RICILGG-GFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 81 ~VVIIGg-G~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
+|+|+|| |.-|...+..|.+ .|++|+++++++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~------~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKN------RGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHH------TTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHh------CCCEEEEEEcCc
Confidence 7999996 9999999999998 688999999874
No 498
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=84.92 E-value=0.53 Score=49.28 Aligned_cols=35 Identities=26% Similarity=0.346 Sum_probs=30.8
Q ss_pred CeEEEECCChhHHHHHHHHHHHHHhcCcEEEEecCCcc
Q 009310 245 IRVAVVGCGYSGVELAATVSERLEEKGIVQAINVETTI 282 (538)
Q Consensus 245 ~~VvVVGgG~~g~E~A~~l~~~~~~~~~Vtlv~~~~~~ 282 (538)
.+|+|||+|.+|+-+|..|++.+.+ |++++..+++
T Consensus 5 ~~vvIIGaG~aGL~aA~~L~~~G~~---V~vlE~~~~~ 39 (520)
T 1s3e_A 5 CDVVVVGGGISGMAAAKLLHDSGLN---VVVLEARDRV 39 (520)
T ss_dssp CSEEEECCBHHHHHHHHHHHHTTCC---EEEECSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCC---EEEEeCCCCC
Confidence 5899999999999999999987654 9999987765
No 499
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=84.91 E-value=0.63 Score=44.94 Aligned_cols=37 Identities=19% Similarity=0.150 Sum_probs=28.7
Q ss_pred CCCCeEEEECCcHHHHHHHHHhhhcccCCCCCCEEEEEcCCCC
Q 009310 77 KKKPRICILGGGFGGLYTALRLESLVWQDDKKPQVLLVDQSER 119 (538)
Q Consensus 77 ~~~~~VVIIGgG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~~ 119 (538)
.|.+||-+||-|.-|...|..|.+ .||+|+++|+++.
T Consensus 3 ~Ms~kIgfIGLG~MG~~mA~~L~~------~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 3 AMSEKIAFLGLGNLGTPIAEILLE------AGYELVVWNRTAS 39 (297)
T ss_dssp -CCCEEEEECCSTTHHHHHHHHHH------TTCEEEEC-----
T ss_pred CCCCcEEEEecHHHHHHHHHHHHH------CCCeEEEEeCCHH
Confidence 345789999999999999999999 7899999998754
No 500
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=84.87 E-value=0.95 Score=40.92 Aligned_cols=32 Identities=31% Similarity=0.435 Sum_probs=28.9
Q ss_pred eEEEEC-CcHHHHHHHHHhhhcccCCCCCCEEEEEcCCC
Q 009310 81 RICILG-GGFGGLYTALRLESLVWQDDKKPQVLLVDQSE 118 (538)
Q Consensus 81 ~VVIIG-gG~AGl~aA~~L~~~~~~~~~g~~V~lie~~~ 118 (538)
+|.||| +|..|...|..|.+ .|++|+++++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~------~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLAT------LGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHT------TTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHH------CCCEEEEEeCCH
Confidence 799999 99999999999988 678999999864
Done!