Query 009311
Match_columns 538
No_of_seqs 280 out of 1532
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 23:38:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009311.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009311hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gjz_A Lysine-specific demethy 100.0 3.2E-50 1.1E-54 392.9 22.2 230 81-366 2-235 (235)
2 3al5_A HTYW5, JMJC domain-cont 100.0 2E-45 6.7E-50 382.5 20.4 247 79-368 28-276 (338)
3 3d8c_A Hypoxia-inducible facto 100.0 3.6E-44 1.2E-48 374.5 22.8 269 46-368 10-300 (349)
4 3k2o_A Bifunctional arginine d 100.0 8.1E-44 2.8E-48 369.2 16.9 235 79-370 44-294 (336)
5 2yu1_A JMJC domain-containing 100.0 3.8E-32 1.3E-36 290.1 16.1 226 80-369 52-303 (451)
6 3kv5_D JMJC domain-containing 100.0 2.6E-30 8.7E-35 279.4 15.7 216 81-370 137-374 (488)
7 3k3o_A PHF8, PHD finger protei 100.0 4.1E-30 1.4E-34 267.4 14.6 225 81-370 18-255 (371)
8 3kv9_A JMJC domain-containing 100.0 8.6E-30 3E-34 267.1 15.4 225 81-370 46-283 (397)
9 3pua_A GRC5, PHD finger protei 100.0 1.5E-29 5.2E-34 264.6 14.4 217 92-370 50-282 (392)
10 3kv4_A PHD finger protein 8; e 100.0 1.2E-28 4E-33 263.0 14.1 208 92-369 107-338 (447)
11 1vrb_A Putative asparaginyl hy 99.9 3.9E-27 1.3E-31 245.1 14.1 210 89-364 26-252 (342)
12 2xdv_A MYC-induced nuclear ant 99.8 1.6E-20 5.5E-25 201.0 10.2 93 251-364 138-232 (442)
13 3pur_A Lysine-specific demethy 99.8 4.6E-19 1.6E-23 190.3 16.2 210 92-370 152-404 (528)
14 4diq_A Lysine-specific demethy 99.8 5.7E-18 1.9E-22 181.5 19.8 98 252-366 164-264 (489)
15 2ypd_A Probable JMJC domain-co 99.1 1.3E-10 4.3E-15 120.3 9.0 243 80-368 10-329 (392)
16 2xxz_A Lysine-specific demethy 98.3 1.9E-05 6.4E-10 81.0 17.5 256 94-368 26-315 (332)
17 3avr_A Lysine-specific demethy 98.0 0.00024 8.3E-09 77.0 19.0 249 97-368 87-374 (531)
18 4ask_A Lysine-specific demethy 97.0 0.0017 5.7E-08 69.6 8.7 107 253-367 236-348 (510)
19 3dxt_A JMJC domain-containing 96.9 0.0045 1.5E-07 63.8 11.0 164 252-419 176-346 (354)
20 3opt_A DNA damage-responsive t 94.9 0.021 7.3E-07 59.2 5.1 111 252-368 219-341 (373)
21 2ox0_A JMJC domain-containing 94.3 0.076 2.6E-06 55.3 7.4 113 252-368 194-316 (381)
22 2e9q_A 11S globulin subunit be 93.4 0.24 8.3E-06 53.0 9.6 76 254-366 325-401 (459)
23 3fz3_A Prunin; TREE NUT allerg 93.0 0.42 1.4E-05 51.8 10.7 71 254-361 397-468 (531)
24 3nw4_A Gentisate 1,2-dioxygena 92.8 0.18 6.3E-06 52.4 7.3 63 255-358 106-168 (368)
25 3ksc_A LEGA class, prolegumin; 92.8 0.57 2E-05 50.5 11.4 71 254-361 361-432 (496)
26 3c3v_A Arachin ARAH3 isoform; 92.7 0.39 1.3E-05 52.0 10.0 74 255-365 376-450 (510)
27 1dgw_A Canavalin; duplicated s 92.7 0.15 5.2E-06 47.2 5.9 63 255-356 45-107 (178)
28 2d40_A Z3393, putative gentisa 92.6 0.29 9.9E-06 50.5 8.5 61 260-362 276-336 (354)
29 3st7_A Capsular polysaccharide 92.4 0.37 1.3E-05 48.9 8.9 76 254-367 274-354 (369)
30 1fxz_A Glycinin G1; proglycini 92.2 0.48 1.6E-05 50.9 9.9 75 254-365 341-416 (476)
31 2vqa_A SLL1358 protein, MNCA; 91.9 0.55 1.9E-05 47.8 9.6 71 255-363 56-129 (361)
32 3nw4_A Gentisate 1,2-dioxygena 91.9 0.67 2.3E-05 48.1 10.2 66 256-363 283-348 (368)
33 4e2g_A Cupin 2 conserved barre 91.8 0.94 3.2E-05 38.4 9.6 65 260-366 49-114 (126)
34 3bu7_A Gentisate 1,2-dioxygena 91.8 0.49 1.7E-05 49.6 9.1 55 260-356 302-356 (394)
35 3ibm_A Cupin 2, conserved barr 91.8 1.2 4.2E-05 40.5 10.8 55 260-356 64-118 (167)
36 1yhf_A Hypothetical protein SP 91.7 1.4 4.7E-05 36.6 10.3 64 260-365 48-111 (115)
37 3kgl_A Cruciferin; 11S SEED gl 91.6 0.58 2E-05 50.1 9.6 73 254-363 326-400 (466)
38 1fi2_A Oxalate oxidase, germin 91.5 0.64 2.2E-05 43.7 8.9 75 256-365 77-154 (201)
39 3kgz_A Cupin 2 conserved barre 91.5 1 3.5E-05 40.8 9.9 53 262-356 54-106 (156)
40 2pfw_A Cupin 2, conserved barr 91.3 1.2 4.2E-05 37.0 9.6 64 258-364 41-104 (116)
41 1v70_A Probable antibiotics sy 91.0 1.3 4.6E-05 35.4 9.3 55 260-356 36-91 (105)
42 1j58_A YVRK protein; cupin, de 91.0 0.68 2.3E-05 47.7 9.2 67 254-358 82-148 (385)
43 2vqa_A SLL1358 protein, MNCA; 90.8 0.7 2.4E-05 47.1 9.0 69 258-364 241-312 (361)
44 2y0o_A Probable D-lyxose ketol 90.7 0.77 2.6E-05 42.8 8.3 83 256-361 58-148 (175)
45 3qac_A 11S globulin SEED stora 90.5 0.84 2.9E-05 48.8 9.5 69 255-360 327-396 (465)
46 2d5f_A Glycinin A3B4 subunit; 90.2 0.92 3.1E-05 48.9 9.6 76 255-367 371-447 (493)
47 3bu7_A Gentisate 1,2-dioxygena 90.0 0.77 2.6E-05 48.1 8.6 62 255-357 126-188 (394)
48 3fjs_A Uncharacterized protein 90.0 2.2 7.4E-05 36.0 10.1 61 260-362 44-104 (114)
49 3ejk_A DTDP sugar isomerase; Y 89.8 3.5 0.00012 38.2 12.0 75 252-357 53-131 (174)
50 1x82_A Glucose-6-phosphate iso 89.8 0.47 1.6E-05 44.4 6.1 65 265-366 86-155 (190)
51 2gu9_A Tetracenomycin polyketi 89.4 1.5 5E-05 36.0 8.4 63 260-364 29-96 (113)
52 1lr5_A Auxin binding protein 1 89.1 1.8 6.3E-05 38.7 9.5 64 260-356 49-112 (163)
53 3lwc_A Uncharacterized protein 89.1 2.2 7.6E-05 36.6 9.5 60 254-356 42-101 (119)
54 4i4a_A Similar to unknown prot 89.1 1.2 4E-05 37.9 7.8 64 262-367 44-109 (128)
55 2ozj_A Cupin 2, conserved barr 88.9 2.7 9.2E-05 34.9 9.8 63 258-363 45-107 (114)
56 2b8m_A Hypothetical protein MJ 88.8 2 6.9E-05 35.9 9.0 59 258-358 34-92 (117)
57 3jzv_A Uncharacterized protein 88.6 2.2 7.5E-05 39.0 9.6 52 262-355 63-114 (166)
58 2o8q_A Hypothetical protein; c 88.3 1.5 5.2E-05 37.6 8.0 54 261-355 52-106 (134)
59 2d40_A Z3393, putative gentisa 87.8 0.75 2.6E-05 47.3 6.6 58 258-357 107-164 (354)
60 3ht1_A REMF protein; cupin fol 87.8 1.1 3.7E-05 38.8 6.8 55 262-356 49-103 (145)
61 2gm6_A Cysteine dioxygenase ty 87.5 1.7 6E-05 41.3 8.5 76 260-366 87-167 (208)
62 2phl_A Phaseolin; plant SEED s 87.5 0.91 3.1E-05 47.6 7.0 74 256-361 244-318 (397)
63 2ea7_A 7S globulin-1; beta bar 87.5 0.74 2.5E-05 48.8 6.4 78 255-357 270-348 (434)
64 1uij_A Beta subunit of beta co 87.3 0.83 2.8E-05 48.2 6.7 82 255-361 253-335 (416)
65 1o5u_A Novel thermotoga mariti 87.0 0.6 2E-05 39.2 4.4 25 333-357 69-93 (101)
66 3lag_A Uncharacterized protein 87.0 0.37 1.3E-05 40.1 3.0 23 333-355 60-82 (98)
67 3cew_A Uncharacterized cupin p 86.9 5.2 0.00018 33.7 10.5 65 261-367 35-103 (125)
68 2oa2_A BH2720 protein; 1017534 86.9 0.98 3.4E-05 39.9 6.0 74 257-367 49-125 (148)
69 1uij_A Beta subunit of beta co 86.6 1.2 4.1E-05 46.9 7.4 63 254-355 52-114 (416)
70 2fqp_A Hypothetical protein BP 86.5 0.62 2.1E-05 38.1 4.2 24 333-356 60-83 (97)
71 3l2h_A Putative sugar phosphat 86.4 3 0.0001 37.1 9.1 58 258-357 53-112 (162)
72 1j58_A YVRK protein; cupin, de 86.1 1.5 5.1E-05 45.1 7.8 69 260-365 265-336 (385)
73 2cav_A Protein (canavalin); vi 86.0 1.5 5E-05 46.7 7.8 74 256-356 286-360 (445)
74 3rns_A Cupin 2 conserved barre 86.0 3.3 0.00011 39.4 9.7 72 254-367 39-110 (227)
75 4axo_A EUTQ, ethanolamine util 85.6 0.84 2.9E-05 41.4 4.9 33 333-365 103-135 (151)
76 2ea7_A 7S globulin-1; beta bar 85.2 1.2 4.1E-05 47.2 6.6 63 255-356 65-127 (434)
77 3d82_A Cupin 2, conserved barr 84.9 0.63 2.1E-05 37.7 3.4 26 333-358 69-94 (102)
78 3i7d_A Sugar phosphate isomera 84.8 3.2 0.00011 37.4 8.5 58 258-357 50-110 (163)
79 2opk_A Hypothetical protein; p 84.7 1 3.5E-05 38.1 4.8 32 334-365 75-109 (112)
80 1y3t_A Hypothetical protein YX 84.6 3.8 0.00013 40.7 9.8 58 259-358 53-111 (337)
81 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 84.2 9.5 0.00032 35.6 11.6 84 253-367 49-137 (185)
82 3h7j_A Bacilysin biosynthesis 84.1 2.9 9.8E-05 40.2 8.3 70 254-365 36-106 (243)
83 2ixk_A DTDP-4-dehydrorhamnose 84.0 9.1 0.00031 35.7 11.3 84 253-367 50-138 (184)
84 3h8u_A Uncharacterized conserv 83.8 0.84 2.9E-05 38.7 3.9 57 258-356 46-103 (125)
85 4b29_A Dimethylsulfoniopropion 83.7 4.5 0.00015 38.8 9.2 72 255-367 135-207 (217)
86 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 83.7 5.6 0.00019 37.6 9.8 84 252-367 60-144 (197)
87 2q30_A Uncharacterized protein 83.7 1.1 3.8E-05 36.7 4.5 59 260-359 41-101 (110)
88 3ryk_A DTDP-4-dehydrorhamnose 82.5 12 0.0004 35.6 11.5 86 252-368 69-161 (205)
89 3eqe_A Putative cystein deoxyg 82.1 2.7 9.3E-05 38.8 6.9 75 259-367 77-154 (171)
90 1oi6_A PCZA361.16; epimerase, 82.0 14 0.00048 35.0 11.9 84 253-367 48-137 (205)
91 1yfu_A 3-hydroxyanthranilate-3 81.9 5.2 0.00018 37.1 8.6 65 254-356 37-101 (174)
92 1dzr_A DTDP-4-dehydrorhamnose 81.5 13 0.00046 34.5 11.4 84 253-367 48-137 (183)
93 2i45_A Hypothetical protein; n 81.4 1.2 4.1E-05 36.8 3.8 25 333-357 68-92 (107)
94 1y3t_A Hypothetical protein YX 81.2 7.6 0.00026 38.5 10.4 25 333-357 258-282 (337)
95 1o4t_A Putative oxalate decarb 80.7 1.4 4.9E-05 38.2 4.2 56 258-356 64-120 (133)
96 1wlt_A 176AA long hypothetical 80.4 13 0.00044 35.1 10.9 85 254-369 67-157 (196)
97 1zvf_A 3-hydroxyanthranilate 3 80.0 5.8 0.0002 36.7 8.2 73 254-360 36-108 (176)
98 2pa7_A DTDP-6-deoxy-3,4-keto-h 79.9 25 0.00086 31.2 12.2 66 261-364 44-112 (141)
99 3bb6_A Uncharacterized protein 79.3 9 0.00031 33.7 8.8 34 332-365 65-100 (127)
100 3uss_A Putative uncharacterize 78.9 7 0.00024 37.3 8.8 77 260-367 81-162 (211)
101 2pyt_A Ethanolamine utilizatio 78.0 2.3 7.9E-05 37.3 4.7 25 333-357 94-118 (133)
102 3rns_A Cupin 2 conserved barre 78.0 12 0.0004 35.5 10.1 64 254-359 155-219 (227)
103 2f4p_A Hypothetical protein TM 77.8 9.7 0.00033 33.5 8.9 58 256-356 53-111 (147)
104 1upi_A DTDP-4-dehydrorhamnose 77.0 26 0.00091 33.6 12.2 85 252-367 66-156 (225)
105 3bcw_A Uncharacterized protein 76.4 2 6.7E-05 37.4 3.7 26 333-358 88-113 (123)
106 2bnm_A Epoxidase; oxidoreducta 75.6 2.8 9.5E-05 38.5 4.8 23 333-355 163-185 (198)
107 2c0z_A NOVW; isomerase, epimer 75.3 24 0.00081 33.7 11.3 84 253-367 56-145 (216)
108 1vj2_A Novel manganese-contain 74.3 2.7 9.2E-05 35.9 4.1 53 262-356 58-110 (126)
109 1juh_A Quercetin 2,3-dioxygena 73.6 6.2 0.00021 40.2 7.3 55 262-357 262-316 (350)
110 4hn1_A Putative 3-epimerase in 72.9 41 0.0014 31.7 12.1 85 252-367 44-134 (201)
111 2ozi_A Hypothetical protein RP 72.2 1.2 4.3E-05 37.0 1.3 24 333-356 60-83 (98)
112 2cav_A Protein (canavalin); vi 72.2 5.6 0.00019 42.2 6.7 62 256-356 91-152 (445)
113 3dl3_A Tellurite resistance pr 71.9 19 0.00064 31.3 8.8 59 275-367 41-100 (119)
114 2vpv_A Protein MIF2, MIF2P; nu 71.7 3.8 0.00013 37.6 4.6 68 255-364 92-160 (166)
115 3h7j_A Bacilysin biosynthesis 71.6 3.6 0.00012 39.5 4.7 34 333-366 185-220 (243)
116 3eln_A Cysteine dioxygenase ty 68.6 21 0.00071 33.6 9.1 77 261-367 79-160 (200)
117 1vr3_A Acireductone dioxygenas 68.6 5.6 0.00019 37.4 5.1 65 266-367 98-164 (191)
118 1zrr_A E-2/E-2' protein; nicke 68.5 3.2 0.00011 38.6 3.4 33 332-364 122-156 (179)
119 3s7i_A Allergen ARA H 1, clone 68.5 6.2 0.00021 41.5 6.0 96 255-363 267-363 (418)
120 1y9q_A Transcriptional regulat 67.5 5.1 0.00017 36.6 4.6 25 333-357 145-169 (192)
121 1juh_A Quercetin 2,3-dioxygena 66.7 16 0.00054 37.2 8.5 63 258-357 54-119 (350)
122 2xlg_A SLL1785 protein, CUCA; 66.2 5 0.00017 38.9 4.4 84 260-365 51-137 (239)
123 1fxz_A Glycinin G1; proglycini 66.1 18 0.00063 38.6 9.1 93 255-363 52-146 (476)
124 2d5f_A Glycinin A3B4 subunit; 63.5 16 0.00053 39.3 8.0 96 255-363 49-146 (493)
125 2rg4_A Uncharacterized protein 61.7 30 0.001 32.7 8.9 36 332-367 169-209 (216)
126 1rc6_A Hypothetical protein YL 61.7 5.4 0.00019 38.6 3.7 25 333-357 219-243 (261)
127 2e9q_A 11S globulin subunit be 61.4 19 0.00066 38.2 8.2 91 255-362 67-159 (459)
128 3kgl_A Cruciferin; 11S SEED gl 61.3 9.3 0.00032 40.8 5.7 38 255-293 47-84 (466)
129 2qnk_A 3-hydroxyanthranilate 3 61.2 24 0.00083 35.0 8.2 69 255-361 34-102 (286)
130 3qac_A 11S globulin SEED stora 61.0 29 0.00098 37.0 9.4 106 255-365 54-165 (465)
131 1sq4_A GLXB, glyoxylate-induce 60.7 6.7 0.00023 38.7 4.2 25 333-357 109-133 (278)
132 1sef_A Conserved hypothetical 60.3 36 0.0012 33.0 9.5 25 333-357 222-246 (274)
133 3s7i_A Allergen ARA H 1, clone 60.0 11 0.00038 39.6 6.0 60 256-355 49-109 (418)
134 4h7l_A Uncharacterized protein 58.1 4.8 0.00016 36.7 2.4 22 333-354 87-108 (157)
135 1rc6_A Hypothetical protein YL 58.0 7.2 0.00025 37.8 3.9 34 333-366 100-133 (261)
136 1sfn_A Conserved hypothetical 57.1 7.3 0.00025 37.5 3.7 36 332-367 204-239 (246)
137 1sef_A Conserved hypothetical 55.6 8.3 0.00029 37.7 3.9 34 333-366 103-136 (274)
138 3d0j_A Uncharacterized protein 53.2 8.2 0.00028 34.5 3.0 65 263-361 40-105 (140)
139 3es4_A Uncharacterized protein 51.9 6 0.00021 34.2 1.9 21 334-354 82-102 (116)
140 2arc_A ARAC, arabinose operon 50.9 22 0.00074 30.7 5.5 35 333-367 57-94 (164)
141 3c3v_A Arachin ARAH3 isoform; 50.3 38 0.0013 36.5 8.2 102 254-363 51-159 (510)
142 2phl_A Phaseolin; plant SEED s 48.6 17 0.0006 37.8 5.2 64 254-356 55-124 (397)
143 3es1_A Cupin 2, conserved barr 47.6 13 0.00044 34.2 3.5 60 258-360 86-145 (172)
144 3kmh_A D-lyxose isomerase; cup 47.3 65 0.0022 31.2 8.5 86 256-357 110-197 (246)
145 3ksc_A LEGA class, prolegumin; 47.0 59 0.002 34.8 9.1 90 256-362 51-142 (496)
146 3dkq_A PKHD-type hydroxylase S 44.5 22 0.00077 34.4 4.9 38 332-369 158-197 (243)
147 1qwr_A Mannose-6-phosphate iso 42.3 14 0.00047 37.3 3.1 23 332-354 158-180 (319)
148 4e2q_A Ureidoglycine aminohydr 41.9 15 0.00053 36.1 3.3 24 333-356 226-249 (266)
149 1zx5_A Mannosephosphate isomer 41.7 13 0.00044 37.2 2.8 25 332-356 158-182 (300)
150 1pmi_A PMI, phosphomannose iso 41.1 16 0.00055 38.6 3.5 24 332-355 266-289 (440)
151 1sfn_A Conserved hypothetical 40.5 20 0.00069 34.3 3.9 23 333-355 87-109 (246)
152 2wfp_A Mannose-6-phosphate iso 40.2 17 0.00059 37.8 3.5 24 332-355 240-263 (394)
153 1sq4_A GLXB, glyoxylate-induce 38.4 15 0.0005 36.2 2.5 26 332-357 230-255 (278)
154 1dgw_Y Canavalin; duplicated s 36.1 21 0.00072 29.5 2.7 26 331-356 5-30 (93)
155 3myx_A Uncharacterized protein 32.0 22 0.00075 34.5 2.5 17 333-349 206-222 (238)
156 4e17_B Catenin alpha-1; four h 31.8 20 0.00067 25.1 1.5 11 455-465 23-33 (40)
157 4e2q_A Ureidoglycine aminohydr 29.5 39 0.0013 33.2 3.9 34 333-368 110-143 (266)
158 3fz3_A Prunin; TREE NUT allerg 25.9 42 0.0014 36.3 3.6 38 255-293 52-89 (531)
159 3gbg_A TCP pilus virulence reg 24.8 76 0.0026 30.1 5.0 35 333-367 50-88 (276)
160 2o1q_A Putative acetyl/propion 24.3 41 0.0014 29.5 2.7 66 257-363 50-116 (145)
161 1yud_A Hypothetical protein SO 23.9 51 0.0017 30.3 3.3 28 336-363 101-131 (170)
162 3i3q_A Alpha-ketoglutarate-dep 22.5 98 0.0033 29.1 5.1 25 332-356 156-183 (211)
163 2qnk_A 3-hydroxyanthranilate 3 21.7 94 0.0032 30.8 4.9 33 332-364 244-276 (286)
No 1
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=100.00 E-value=3.2e-50 Score=392.93 Aligned_cols=230 Identities=29% Similarity=0.550 Sum_probs=195.2
Q ss_pred ceeEEeCCCCCCHHHHHHHhhcCCCcEEEecCCCCcccccCCCCCCCChhhHHHHhCCCceEEEeccCCCcccCCcCccc
Q 009311 81 EIRSFEFDQLPSATQFASQIESSNIPAVFKGCIKDWKAFSNWNPTEGGLDYLQERLGTSVVEAMLSRTAPIFYGDIRRHE 160 (538)
Q Consensus 81 ~I~r~~~~~~~S~eeF~~~y~~~~~PVVIrG~~~~WpA~~kWt~~~~~ldYL~e~~Gd~~V~v~~~~~g~~fy~d~~s~~ 160 (538)
.|+|+ ..||+++|+++|+.+++||||||++++|||+++|+ .+||++++|+..|.+..+... ..+ ...
T Consensus 2 tipri---~~pS~~eF~~~y~~~~~Pvvi~g~~~~wpa~~~w~-----~~yL~~~~g~~~v~v~~~~~~---~~~--~~~ 68 (235)
T 4gjz_A 2 TVPRL---HRPSLQHFREQFLVPGRPVILKGVADHWPCMQKWS-----LEYIQEIAGCRTVPVEVGSRY---TDE--EWS 68 (235)
T ss_dssp BCCEE---ESCCHHHHHHHTTTTTCCEEEESSSTTSHHHHHCS-----HHHHHHHHTTSEEEEEEC------------CE
T ss_pred CCCCC---CCCCHHHHHHHHhcCCCcEEEeCCCcCCcccccCC-----HHHHHHHcCCCeEEEEecCcc---cCC--ccc
Confidence 58999 56999999999999999999999999999999999 799999999999998765321 111 234
Q ss_pred eeeecHHHHHHHHHHhhccccCCCCCCCCcccccccCCCCCCCcccCCCCCCCceeeeeccCCccchhhhhchhhHHhhc
Q 009311 161 RVALPFSTFIGLCKQHKQKMYDGCDDYVEPELHRQVDSNLESPSLLSGDVAPQQLYLAQAPIMSAENEETVQLETLKEDI 240 (538)
Q Consensus 161 ~~~m~f~eFLd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~YL~q~~i~~~~~~e~~~~p~L~~Di 240 (538)
...|+|++|++.+... ......|+++..+.. .++.|.+|+
T Consensus 69 ~~~~~~~~~~~~~~~~---------------------------------~~~~~~y~~~~~~~~-------~~~~l~~d~ 108 (235)
T 4gjz_A 69 QTLMTVNEFISKYIVN---------------------------------EPRDVGYLAQHQLFD-------QIPELKQDI 108 (235)
T ss_dssp EEEEEHHHHHHHHTSS---------------------------------CCSSCEEEEEECHHH-------HCHHHHTTC
T ss_pred eeeccHHHHHHHHhhc---------------------------------CCcccceeehhhhhh-------hhHHHHHhh
Confidence 5689999999976431 023468998876655 689999999
Q ss_pred CCCcccccc----cccceEEEEeCCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCC
Q 009311 241 ATPAFLETK----KLAAINLWMNNAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENP 316 (538)
Q Consensus 241 ~~P~~l~~~----~~~~~~lWiG~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~p 316 (538)
..|.++... .....++|||++|++|++|+|+++|++|||.|+|+|+||||++.++||+.+.. ...+.|.||+++|
T Consensus 109 ~~p~~~~~~~~~~~~~~~~~wiG~~gs~t~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~-~~~~~s~vd~~~~ 187 (235)
T 4gjz_A 109 SIPDYCSLGDGEEEEITINAWFGPQGTISPLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTH-LLHNTSQVDVENP 187 (235)
T ss_dssp CCCGGGGGSSSCGGGCEEEEEEECTTCEEEEECCSSEEEEEEEESCEEEEEECGGGGGGSCBCSST-TTTTBBSSCTTSC
T ss_pred cCCccccccccccCccceEEEEeCCCCCceeeeccccceEEEEeeeEeeEEcCcccccccccCccc-ccCccccccccCc
Confidence 999876532 23457899999999999999999999999999999999999999999987542 2356899999999
Q ss_pred CCCCCCcccccCCccEEEEEcCCCEEecCCCCeEEEeeCCceEEEEEeeC
Q 009311 317 DFSIYPRAEHSGEYSQKVILHAGDALFIPEGWFHQVDSDDLTIAVNFWWR 366 (538)
Q Consensus 317 D~~kyP~f~~a~~~~~e~~L~pGD~LfIP~gWWH~V~s~~~sIaVN~w~~ 366 (538)
|+++||+++++. +++|+|+|||+||||+||||+|+|++.|||||+||.
T Consensus 188 d~~~~p~~~~~~--~~~~~l~pGD~LyiP~gW~H~V~~l~~sisvn~w~s 235 (235)
T 4gjz_A 188 DLEKFPKFAKAP--FLSCILSPGEILFIPVKYWHYVRALDLSFSVSFWWS 235 (235)
T ss_dssp CTTTCGGGGGCC--CEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEEC
T ss_pred chhhCccccCCC--cEEEEECCCCEEEeCCCCcEEEEECCCEEEEEEecC
Confidence 999999999885 689999999999999999999999999999999994
No 2
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=100.00 E-value=2e-45 Score=382.46 Aligned_cols=247 Identities=27% Similarity=0.462 Sum_probs=195.8
Q ss_pred CCceeEEeCCCCCCHHHHHHHhhcCCCcEEEecCCCCcccccCCCCCCCChhhHHHHhCCCceEEEeccCCCcccCCcCc
Q 009311 79 SLEIRSFEFDQLPSATQFASQIESSNIPAVFKGCIKDWKAFSNWNPTEGGLDYLQERLGTSVVEAMLSRTAPIFYGDIRR 158 (538)
Q Consensus 79 ~~~I~r~~~~~~~S~eeF~~~y~~~~~PVVIrG~~~~WpA~~kWt~~~~~ldYL~e~~Gd~~V~v~~~~~g~~fy~d~~s 158 (538)
...|+|+ ..+|+++|.++|..+++||||+| +.+|||+++|+ .+||++++|+..|.+..+.++...|.+ ..
T Consensus 28 ~~~I~r~---~~lS~~eF~~~y~~~~kPvVi~g-~~~wpa~~~Ws-----~dyL~~~~g~~~V~v~~~~~~~~~~~~-~~ 97 (338)
T 3al5_A 28 HLPVPRL---EGVSREQFMQHLYPQRKPLVLEG-IDLGPCTSKWT-----VDYLSQVGGKKEVKIHVAAVAQMDFIS-KN 97 (338)
T ss_dssp CCBCCEE---ESCCHHHHHHHTGGGCCCEEEES-CCCCTHHHHCC-----HHHHHHHHCSCEEEEEC----CCCC-C-CC
T ss_pred CCCCCEE---CCCCHHHHHHHhhcCCCeEEEeC-CCCCcccccCC-----HHHHHHhhCCceEEEEEcCCCCccccc-cc
Confidence 3579999 56999999999999999999999 89999999998 799999999999999876554322211 12
Q ss_pred cceeeecHHHHHHHHHHhhccccCCCCCCCCcccccccCCCCCCCcccCCCCCCCceeeeeccCCcc-ch-hhhhchhhH
Q 009311 159 HERVALPFSTFIGLCKQHKQKMYDGCDDYVEPELHRQVDSNLESPSLLSGDVAPQQLYLAQAPIMSA-EN-EETVQLETL 236 (538)
Q Consensus 159 ~~~~~m~f~eFLd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~YL~q~~i~~~-~~-~e~~~~p~L 236 (538)
...+.|+|++|++++...... . ++. .....+||++.+.... .. .-...+|.|
T Consensus 98 ~~~~~~~f~efl~~~~~~~~~-----------------------~-~l~--~~~~~~Yl~~~~~~~~~~~~~l~~~~p~L 151 (338)
T 3al5_A 98 FVYRTLPFDQLVQRAAEEKHK-----------------------E-FFV--SEDEKYYLRSLGEDPRKDVADIRKQFPLL 151 (338)
T ss_dssp CCEEEEEHHHHHHHHHC-CCS-----------------------S-CSS--CTTCCCEEECCCSSTTTCCCCHHHHCHHH
T ss_pred ceeEEeEHHHHHHHHHhcccc-----------------------c-ccc--CCCcccchhhcccccccchhhHhHHCHHH
Confidence 345789999999998643110 0 000 0235789986531000 00 001268999
Q ss_pred HhhcCCCcccccccccceEEEEeCCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCC
Q 009311 237 KEDIATPAFLETKKLAAINLWMNNAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENP 316 (538)
Q Consensus 237 ~~Di~~P~~l~~~~~~~~~lWiG~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~p 316 (538)
++||.+|.++..+.+...++|||++|++|++|+|+++||+|||.|+|+|+||||.+.+.||+.. ...+.+|+++|
T Consensus 152 ~~d~~~P~~~~~d~~~~s~l~~g~~g~~~~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~ly~~~-----~~~~~~d~~~~ 226 (338)
T 3al5_A 152 KGDIKFPEFFKEEQFFSSVFRISSPGLQLWTHYDVMDNLLIQVTGKKRVVLFSPRDAQYLYLKG-----TKSEVLNIDNP 226 (338)
T ss_dssp HTTCCCCCCSCGGGEEEEEEEEECTTCEEEEECCSSEEEEEECSSCEEEEEECGGGGGGGTEET-----TEESCCCSSSC
T ss_pred HHhcCCCccccccccccceeEECCCCCCccceECCcccEEEEEEEEEEEEEECcccccccccCC-----CCcccccCCCc
Confidence 9999999988766666678999999999999999999999999999999999999999999742 22457899999
Q ss_pred CCCCCCcccccCCccEEEEEcCCCEEecCCCCeEEEeeCCceEEEEEeeCCc
Q 009311 317 DFSIYPRAEHSGEYSQKVILHAGDALFIPEGWFHQVDSDDLTIAVNFWWRSS 368 (538)
Q Consensus 317 D~~kyP~f~~a~~~~~e~~L~pGD~LfIP~gWWH~V~s~~~sIaVN~w~~~~ 368 (538)
|+++||+|+.+. +++|+|+|||+||||+||||+|.+++.|||||+||+..
T Consensus 227 d~~~~p~~~~~~--~~~~~L~pGD~LyiP~gWwH~v~~l~~sisvn~~~~~~ 276 (338)
T 3al5_A 227 DLAKYPLFSKAR--RYECSLEAGDVLFIPALWFHNVISEEFGVGVNIFWKHL 276 (338)
T ss_dssp CTTTCTTGGGCC--EEEEEECTTCEEEECTTCEEEEEESSCEEEEEEEECSS
T ss_pred chhhCcccccCC--CEEEEECCCCEEEECCCCeEEEeeCCCEEEEEEEecCC
Confidence 999999998873 78999999999999999999999999999999999984
No 3
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=100.00 E-value=3.6e-44 Score=374.47 Aligned_cols=269 Identities=22% Similarity=0.405 Sum_probs=204.7
Q ss_pred CCccccccCCCCCCCCCCCccccccccCcccccCCceeEEeCCCCCCHHHHHHHhhcCCCcEEEecCCCCcccccCCCCC
Q 009311 46 PERTARSLGYSRGKPAADSFLSVHHDVGKEMEESLEIRSFEFDQLPSATQFASQIESSNIPAVFKGCIKDWKAFSNWNPT 125 (538)
Q Consensus 46 ~~~~~~~~g~~~~~~~~~~f~~~~~~~~~~~~~~~~I~r~~~~~~~S~eeF~~~y~~~~~PVVIrG~~~~WpA~~kWt~~ 125 (538)
+.+..++-|.+..- ...|++.... .-......|+|+ +.+|++ | ++|+.+++||||+|++.+||| ++|+
T Consensus 10 ~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~I~Rv---~~~s~~-~-~~y~~~~~PVVi~g~~~~wpA-~kWt-- 77 (349)
T 3d8c_A 10 ASGSGEPREEAGAL--GPAWDESQLR--SYSFPTRPIPRL---SQSDPR-A-EELIENEEPVVLTDTNLVYPA-LKWD-- 77 (349)
T ss_dssp CCTTCSCCBCTTTC--CBSCCGGGSC--CCSSCEEECCEE---CTTCHH-H-HHHHHTTCCEEESCCCTTGGG-GGCC--
T ss_pred ccCCCCcccccccc--ccccCHHHHH--hcCCCCCCceEe---cCCChh-H-HHHhcCCccEEEeCCCCCccc-ccCC--
Confidence 44444444444332 2455554322 111223579999 667887 5 678899999999999999999 9998
Q ss_pred CCChhhHHHHhCCCceEEEeccCCCcccCCcC----------ccceeeecHHHHHHHHHHhhccccCCCCCCCCcccccc
Q 009311 126 EGGLDYLQERLGTSVVEAMLSRTAPIFYGDIR----------RHERVALPFSTFIGLCKQHKQKMYDGCDDYVEPELHRQ 195 (538)
Q Consensus 126 ~~~ldYL~e~~Gd~~V~v~~~~~g~~fy~d~~----------s~~~~~m~f~eFLd~~~~~~~~~~~~~~~~~~~~~~~~ 195 (538)
++||++++|+..|.|..+.+|+..|.+.. ..+++.|+|++|++++.+....
T Consensus 78 ---~eyL~~~~G~~~V~V~~~~~~~~~y~d~~~~~~~~~F~~~~~~~~m~~~efl~~~~~~~~~---------------- 138 (349)
T 3d8c_A 78 ---LEYLQENIGNGDFSVYSASTHKFLYYDEKKMANFQNFKPRSNREEMKFHEFVEKLQDIQQR---------------- 138 (349)
T ss_dssp ---HHHHHHHSCSSCEEEEEESSSBCCCCCGGGTTSCTTCCCSEEEEEECHHHHHHHHHHHHHH----------------
T ss_pred ---HHHHHHhhCCCeEEEEECCCCcccccccccccccccccccceeEeeEHHHHHHHHHhhccc----------------
Confidence 89999999999999988777765554421 0135789999999998764221
Q ss_pred cCCCCCCCcccCCCCCCCceeeeeccCCccchhhhhchhhHHhhcCCC--ccccc-------ccccceEEEEeCCCCCce
Q 009311 196 VDSNLESPSLLSGDVAPQQLYLAQAPIMSAENEETVQLETLKEDIATP--AFLET-------KKLAAINLWMNNAKSKSS 266 (538)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~YL~q~~i~~~~~~e~~~~p~L~~Di~~P--~~l~~-------~~~~~~~lWiG~~gs~T~ 266 (538)
.....+||++..... ..|.|..|+..+ .++.. ......++|||++|++|+
T Consensus 139 --------------~~~~~~YL~~~~~~~-------~~~~l~~D~~~~~~~~~~~~~~~~~~~~~~~~~l~iG~~gs~t~ 197 (349)
T 3d8c_A 139 --------------GGEERLYLQQTLNDT-------VGRKIVMDFLGFNWNWINKQQGKRGWGQLTSNLLLIGMEGNVTP 197 (349)
T ss_dssp --------------TCCCEEEEEEECCTT-------SCHHHHHHHHTSCHHHHHHHHHHTTCCCEEECEEEEECTTCEEE
T ss_pred --------------CCCCCeeeecccccc-------cchhhhhhhhccchhhhhhhhhccccCccccceEEEECCCCCcc
Confidence 013579999753322 456777776532 12211 112224599999999999
Q ss_pred eeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEcCCCEEecCC
Q 009311 267 AHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILHAGDALFIPE 346 (538)
Q Consensus 267 lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~pGD~LfIP~ 346 (538)
+|+|+++||+|||.|+|+|+||||.+.++||+.+......+.|.||+.+||+++||+|+.+. +++|+|+|||+||||+
T Consensus 198 ~H~D~~~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~--~~~~~l~pGD~LyiP~ 275 (349)
T 3d8c_A 198 AHYGEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVV--GYETVVGPGDVLYIPM 275 (349)
T ss_dssp EECCSEEEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCC--EEEEEECTTCEEEECT
T ss_pred ceECChhcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCC--cEEEEECCCCEEEECC
Confidence 99999999999999999999999999999999876655567889999999999999998874 7999999999999999
Q ss_pred CCeEEEeeCC---ceEEEEEeeCCc
Q 009311 347 GWFHQVDSDD---LTIAVNFWWRSS 368 (538)
Q Consensus 347 gWWH~V~s~~---~sIaVN~w~~~~ 368 (538)
||||+|.|++ .||||||||++.
T Consensus 276 gWwH~V~~l~d~~~sisvn~w~~~~ 300 (349)
T 3d8c_A 276 YWWHHIESLLNGGITITVNFWYKGA 300 (349)
T ss_dssp TCEEEEEECTTSCCEEEEEEEEECC
T ss_pred CCcEEEEEcCCCCcEEEEEEEcCCC
Confidence 9999999975 899999999874
No 4
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=100.00 E-value=8.1e-44 Score=369.18 Aligned_cols=235 Identities=21% Similarity=0.329 Sum_probs=187.2
Q ss_pred CCceeEEeCC-CCCCHHHHHHHhhcCCCcEEEecCCCCcccccCCCCCCCChhhHHHHhCCCceEEEeccCCCcccCCcC
Q 009311 79 SLEIRSFEFD-QLPSATQFASQIESSNIPAVFKGCIKDWKAFSNWNPTEGGLDYLQERLGTSVVEAMLSRTAPIFYGDIR 157 (538)
Q Consensus 79 ~~~I~r~~~~-~~~S~eeF~~~y~~~~~PVVIrG~~~~WpA~~kWt~~~~~ldYL~e~~Gd~~V~v~~~~~g~~fy~d~~ 157 (538)
...|+|+ + +.+|+++|.++|+.+++||||+|++++|||+++|+ ++||++++|+..|.|..+.+|
T Consensus 44 ~~~I~Ri--~~~~lS~eeF~~~y~~~~~PvVi~g~~~~WpA~~~Wt-----~~yL~~~~G~~~V~v~~~~~~-------- 108 (336)
T 3k2o_A 44 ADNVERA--DALQLSVEEFVERYERPYKPVVLLNAQEGWSAQEKWT-----LERLKRKYRNQKFKCGEDNDG-------- 108 (336)
T ss_dssp CCCCCEE--EGGGCCHHHHHHHTTTTTCCEEEESTTTTCTHHHHCS-----HHHHHHHSTTCEEEEEECTTS--------
T ss_pred CCCCCEe--cCCCCCHHHHHHHhhccCCCEEEeCCcCCChhHhhhh-----HHHHHHHhCCceEEEEecCCC--------
Confidence 3679999 5 58999999999999999999999999999999999 899999999999998764332
Q ss_pred ccceeeecHHHHHHHHHHhhccccCCCCCCCCcccccccCCCCCCCcccCCCCCCCceeeeeccCCccchhhhhchhhHH
Q 009311 158 RHERVALPFSTFIGLCKQHKQKMYDGCDDYVEPELHRQVDSNLESPSLLSGDVAPQQLYLAQAPIMSAENEETVQLETLK 237 (538)
Q Consensus 158 s~~~~~m~f~eFLd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~YL~q~~i~~~~~~e~~~~p~L~ 237 (538)
..+.|+|++|++++.+.. ...++||++..+.+ ...+|.|+
T Consensus 109 --~~~~m~~~~fl~~~~~~~---------------------------------~~~~lYL~d~~~~e-----~~~~p~L~ 148 (336)
T 3k2o_A 109 --YSVKMKMKYYIEYMESTR---------------------------------DDSPLYIFDSSYGE-----HPKRRKLL 148 (336)
T ss_dssp --CEEEEEHHHHHHHHHHCC---------------------------------CSSCCCEEESCGGG-----STTGGGGG
T ss_pred --ceeeecHHHHHHHHHhcC---------------------------------CCCCceEecccccc-----cccchhHH
Confidence 246899999999987531 13479999765432 22589999
Q ss_pred hhcCCCcccccc---------cccceEEEEeCCCCCceeeeccCC--ceeEEEEeEEEEEEeCCCCCCCCccccccCCCC
Q 009311 238 EDIATPAFLETK---------KLAAINLWMNNAKSKSSAHYDPHH--NLLCIVAGCKQVVLWPPAASPMLYPMSVYGEAS 306 (538)
Q Consensus 238 ~Di~~P~~l~~~---------~~~~~~lWiG~~gs~T~lH~D~~~--N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~ 306 (538)
+||.+|.++..+ .....++|||++|++|++|+|+++ ||+|||.|+|+|+||||++.+.||+.+.. ..+
T Consensus 149 ~dy~~P~~f~~d~~~~~~~~~~p~~~~~~~G~~gs~t~~H~D~~~~~~~~~~v~G~K~~~L~pP~~~~~ly~~~~~-~~~ 227 (336)
T 3k2o_A 149 EDYKVPKFFTDDLFQYAGEKRRPPYRWFVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRD-EGG 227 (336)
T ss_dssp GGCCCCGGGCCCGGGGGCTTTSCCCEEEEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECTTSCHHHHCCCHH-HHG
T ss_pred HhcCCCcccccchhhhcccccCCCceEEEECCCCccCCcccCCCccceeeEEEeeeEEEEEeCCCcchhcccCccc-ccC
Confidence 999999887542 233578999999999999999985 69999999999999999998889876531 011
Q ss_pred CcccCCCCCCCCCCCCccccc----CCccEEEEEcCCCEEecCCCCeEEEeeCCceEEEEEeeCCccc
Q 009311 307 NHSSISLENPDFSIYPRAEHS----GEYSQKVILHAGDALFIPEGWFHQVDSDDLTIAVNFWWRSSIM 370 (538)
Q Consensus 307 ~~S~Vd~~~pD~~kyP~f~~a----~~~~~e~~L~pGD~LfIP~gWWH~V~s~~~sIaVN~w~~~~~~ 370 (538)
+....+ .+++...||+++.. ...+++|+|+|||+||||+||||+|.+.+.||+||+||.+..+
T Consensus 228 ~~~~~~-~~w~~~~~P~~~~~~~p~~~~~~~~~l~pGd~l~iP~gw~H~v~~~~~sisv~~~f~~~~n 294 (336)
T 3k2o_A 228 NQQDEA-ITWFNVIYPRTQLPTWPPEFKPLEILQKPGETVFVPGGWWHVVLNLDTTIAITQNFASSTN 294 (336)
T ss_dssp GGTTCH-HHHHHHTGGGGGSTTSCGGGCCEEEEECTTCEEEECTTCEEEEEESSCEEEEEEEECCTTT
T ss_pred CCccch-hhhhhhhCcchhhhcccccCceEEEEECCCCEEEeCCCCcEEEecCCCeEEEEcccCCccc
Confidence 111111 11334567766531 2347899999999999999999999999999999999999643
No 5
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=99.97 E-value=3.8e-32 Score=290.15 Aligned_cols=226 Identities=17% Similarity=0.218 Sum_probs=158.9
Q ss_pred CceeEEeCCCCCCHHHHHHHhhcCCCcEEEecCCCCccc---ccCCCCCCCChhhHHHHhC-CCceEEEeccCCCcccCC
Q 009311 80 LEIRSFEFDQLPSATQFASQIESSNIPAVFKGCIKDWKA---FSNWNPTEGGLDYLQERLG-TSVVEAMLSRTAPIFYGD 155 (538)
Q Consensus 80 ~~I~r~~~~~~~S~eeF~~~y~~~~~PVVIrG~~~~WpA---~~kWt~~~~~ldYL~e~~G-d~~V~v~~~~~g~~fy~d 155 (538)
..|+|++ .+.+|. +|.++ ...++||||+|+ ++|+| .++|| ++||++++| +..|.|....+
T Consensus 52 ~~V~ri~-~~~Ls~-EF~~~-~~~nkPVVIt~~-~~Wpa~~P~~kWt-----~dyL~~~~G~d~~V~V~D~~~------- 115 (451)
T 2yu1_A 52 NFVTFME-GKDFNV-EYIQR-GGLRDPLIFKNS-DGLGIKMPDPDFT-----VNDVKMCVGSRRMVDVMDVNT------- 115 (451)
T ss_dssp CCCEECC-GGGCSH-HHHHH-HCSCSCEEESSC-TTTTCBCCCTTCC-----HHHHHHHTCTTCCCCCEETTS-------
T ss_pred CceEecc-cccCCH-HHHHh-cCCCCcEEEccC-cCCCCcCCcCCCC-----HHHHHHHcCCCceEeeEEcCC-------
Confidence 5799992 268999 99988 579999999999 99999 88999 899999999 58888763222
Q ss_pred cCccceeeecHHHHHHHHHHhhccccCCCCCCCCcccccccCCCCCCCcccCCCCCCCceeee-eccCCccchhhhhchh
Q 009311 156 IRRHERVALPFSTFIGLCKQHKQKMYDGCDDYVEPELHRQVDSNLESPSLLSGDVAPQQLYLA-QAPIMSAENEETVQLE 234 (538)
Q Consensus 156 ~~s~~~~~m~f~eFLd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~YL~-q~~i~~~~~~e~~~~p 234 (538)
.+.+.|+|++|++++++..+ ....+|+. +..+.++........|
T Consensus 116 ---q~~~~M~l~eyidy~~~~~d--------------------------------~r~~LY~v~sLeF~~~~l~~~~~~P 160 (451)
T 2yu1_A 116 ---QKGIEMTMAQWTRYYETPEE--------------------------------EREKLYNVISLEFSHTRLENMVQRP 160 (451)
T ss_dssp ---SCCTTCCHHHHHHHHTSCTT--------------------------------TCCSCEEEEEECCTTSTTGGGCBCC
T ss_pred ---CcceeeeHHHHHHHHhhccc--------------------------------cccchhhhcccccccccccccccCc
Confidence 23468999999999864311 12357762 1111111111112457
Q ss_pred hHHhhcC-----CCccccc------------cccc-ceEEEEeCCCCCceeeeccC--CceeEEEEeEEEEEEeCCCCCC
Q 009311 235 TLKEDIA-----TPAFLET------------KKLA-AINLWMNNAKSKSSAHYDPH--HNLLCIVAGCKQVVLWPPAASP 294 (538)
Q Consensus 235 ~L~~Di~-----~P~~l~~------------~~~~-~~~lWiG~~gs~T~lH~D~~--~N~~~qI~G~Krw~LfPP~~~~ 294 (538)
.|..|+. +|..+.. ..+. ..++|||++||+|++|+|++ +||++||.|+|+|+||||.+.+
T Consensus 161 ~l~~d~Dwv~~~~p~~l~~~~~d~f~~lge~~rP~~~r~~~mGp~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~ 240 (451)
T 2yu1_A 161 STVDFIDWVDNMWPRHLKESQTESTNAILEMQYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHN 240 (451)
T ss_dssp HHHHHHCHHHHHSCGGGCC-----------CCSCCCCCEEEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHH
T ss_pred hhhhhhhcccccCchhhhhhhhhhhhhcccccCCchheEEEEccCCCCCCeEECCCCcchhhheecceEEEEEeCCCccc
Confidence 7777663 3432210 1122 26789999999999999997 5899999999999999999864
Q ss_pred C-CccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEcCCCEEecCCCCeEEEeeCCceEEEEEeeCCcc
Q 009311 295 M-LYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILHAGDALFIPEGWFHQVDSDDLTIAVNFWWRSSI 369 (538)
Q Consensus 295 ~-LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~pGD~LfIP~gWWH~V~s~~~sIaVN~w~~~~~ 369 (538)
. +|+. +..+.+.+. ..||.+. ..+++|+|+|||+||||+||||+|.|++.|||||.+|.+..
T Consensus 241 ~~~y~~--~~~s~~q~~--------~~~p~~~---~~~~~v~l~pGE~LfIPsGWwH~V~nledsIait~NF~~~~ 303 (451)
T 2yu1_A 241 LELYEN--WLLSGSQGD--------IFLGDRV---SDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFLHSF 303 (451)
T ss_dssp HHHHHH--HHHTTCCSS--------SCHHHHS---SCCEEEEECTTCEEEECTTCEEEEECSSCEEEEEEEECCSS
T ss_pred cccccc--ccccccchh--------hhhcccc---ccceEEEECCCcEEEeCCCceEEEecCCCeEEEeeeeCCcc
Confidence 3 2221 111111111 1355542 34789999999999999999999999999999977777643
No 6
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=99.97 E-value=2.6e-30 Score=279.38 Aligned_cols=216 Identities=13% Similarity=0.204 Sum_probs=157.6
Q ss_pred ceeEEeCCCCCCHHHHHHHhhcCCCcEEEecCC---CCcccccCCCCCCCChhhHHHHhC-CCceEEEeccCCCcccCCc
Q 009311 81 EIRSFEFDQLPSATQFASQIESSNIPAVFKGCI---KDWKAFSNWNPTEGGLDYLQERLG-TSVVEAMLSRTAPIFYGDI 156 (538)
Q Consensus 81 ~I~r~~~~~~~S~eeF~~~y~~~~~PVVIrG~~---~~WpA~~kWt~~~~~ldYL~e~~G-d~~V~v~~~~~g~~fy~d~ 156 (538)
-|.+++ .+.++.+.|.+.. -++||||++.. ..||+ .+|| ++|+++.+| +.+|.|....+
T Consensus 137 ~v~~~~-~~~~~~~~~~~~~--~~~Pvli~~~~~lg~~~P~-~~~t-----~~~v~~~~G~d~~V~V~Dv~~-------- 199 (488)
T 3kv5_D 137 IIIKMH-GSQLTQRYLEKHG--FDVPIMVPKLDDLGLRLPS-PTFS-----VMDVERYVGGDKVIDVIDVAR-------- 199 (488)
T ss_dssp TCEECC-GGGCCHHHHHHHC--SCSCEEECSCTTTCCBCCC-TTCC-----HHHHHHHHCTTCEEEEEETTT--------
T ss_pred eeeccc-cccchHHHHHhcC--CCCCEEEecCCCcCCcCCC-CCCc-----HHHHHHHhCCCceeeeeecCc--------
Confidence 355651 1456666555433 48999999864 57999 8999 999999999 89999874322
Q ss_pred CccceeeecHHHHHHHHHHhhccccCCCCCCCCcccccccCCCCCCCcccCCCCCCCceeeeeccCCccchhhhhchhhH
Q 009311 157 RRHERVALPFSTFIGLCKQHKQKMYDGCDDYVEPELHRQVDSNLESPSLLSGDVAPQQLYLAQAPIMSAENEETVQLETL 236 (538)
Q Consensus 157 ~s~~~~~m~f~eFLd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~YL~q~~i~~~~~~e~~~~p~L 236 (538)
.....|+|++|++++++.. +...+|+.+..+-.. .|
T Consensus 200 --Q~~~~m~l~~yi~y~~~~~---------------------------------r~~~~nv~slefs~~---------~L 235 (488)
T 3kv5_D 200 --QADSKMTLHNYVKYFMNPN---------------------------------RPKVLNVISLEFSDT---------KM 235 (488)
T ss_dssp --TEEEEEEHHHHHHHHHSSS---------------------------------CSSCEEEEEEECTTS---------GG
T ss_pred --cccccccHHHHHHHHhccC---------------------------------Ccccccccccccccc---------hh
Confidence 2356899999999986421 235788887655432 36
Q ss_pred HhhcCCCccccc---------------ccccceEEEEeCCCCCceeeeccCCc--eeEEEEeEEEEEEeCCCCCC-CCcc
Q 009311 237 KEDIATPAFLET---------------KKLAAINLWMNNAKSKSSAHYDPHHN--LLCIVAGCKQVVLWPPAASP-MLYP 298 (538)
Q Consensus 237 ~~Di~~P~~l~~---------------~~~~~~~lWiG~~gs~T~lH~D~~~N--~~~qI~G~Krw~LfPP~~~~-~LYp 298 (538)
.++|..|.++.. ++.....+|||++||+|++|+|++.| |+|||.|+|+|+||||.+.+ .+|.
T Consensus 236 ~~~~~~P~~~~~~d~~~~~wp~~~~~~rP~~~r~~~mG~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~ 315 (488)
T 3kv5_D 236 SELVEVPDIAKKLSWVENYWPDDSVFPKPFVQKYCLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYE 315 (488)
T ss_dssp GGGCBCCHHHHHHCHHHHHCCTTCSSCCCCCSCEEEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHH
T ss_pred hccCCCChhhhhhchhhhcCcccccccCcccceEEEEcCCCCCCCeEECCCCCceeeeccCeeEEEEEeCCccccccccc
Confidence 666666655522 11223579999999999999999866 89999999999999998754 3443
Q ss_pred ccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEcCCCEEecCCCCeEEEeeCCceEEEEEeeCCccc
Q 009311 299 MSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILHAGDALFIPEGWFHQVDSDDLTIAVNFWWRSSIM 370 (538)
Q Consensus 299 ~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~pGD~LfIP~gWWH~V~s~~~sIaVN~w~~~~~~ 370 (538)
. + +...++.+.|+..... .+++|+|+|||+||||+||||+|.|++.||+||.||.+..+
T Consensus 316 ~--~---------~~~~~~~~~~~~~~~~--~~~~~~l~pGe~lfIPsGWwH~V~nledsIai~~NF~~~~n 374 (488)
T 3kv5_D 316 S--W---------SSSVTQSEVFFGDKVD--KCYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLN 374 (488)
T ss_dssp H--H---------HTCSSGGGSCGGGSSS--CCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTT
T ss_pred c--c---------ccCCccchhhhccccc--ceEEEeeCCCCEEEeCCCceEEeeCCCCeEEEccccCCccC
Confidence 1 1 1111233445544433 47999999999999999999999999999999999998644
No 7
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=99.96 E-value=4.1e-30 Score=267.38 Aligned_cols=225 Identities=14% Similarity=0.171 Sum_probs=156.9
Q ss_pred ceeEEeCCCCCCHHHHHHHhhcCCCcEEEecCC---CCcccccCCCCCCCChhhHHHHhC-CCceEEEeccCCCcccCCc
Q 009311 81 EIRSFEFDQLPSATQFASQIESSNIPAVFKGCI---KDWKAFSNWNPTEGGLDYLQERLG-TSVVEAMLSRTAPIFYGDI 156 (538)
Q Consensus 81 ~I~r~~~~~~~S~eeF~~~y~~~~~PVVIrG~~---~~WpA~~kWt~~~~~ldYL~e~~G-d~~V~v~~~~~g~~fy~d~ 156 (538)
-|.+++ .+.+|.+.|.+.. -++||||++.. ..||+. +|| ++|+++.+| +.+|.|....
T Consensus 18 ~v~~i~-~~d~t~~y~~~~~--~~~Pvli~~~~glg~~~P~~-~~t-----v~~v~~~vG~d~~V~ViDv~--------- 79 (371)
T 3k3o_A 18 VILKPT-GNQLTVEFLEENS--FSVPILVLKKDGLGMTLPSP-SFT-----VRDVEHYVGSDKEIDVIDVT--------- 79 (371)
T ss_dssp TSBCCC-TTTCCHHHHHHHT--TCSCEEESSCTTSCCBCCCT-TCC-----HHHHHHHHCC-CEEEEEETT---------
T ss_pred hcccCC-hhhCcHHHHHhcC--CCCCEEEecCcccCCcCCCC-CCC-----HHHHHHHcCCCceEeeeecC---------
Confidence 467772 2577777776654 58999999754 589987 899 999999999 8999987432
Q ss_pred CccceeeecHHHHHHHHHHhhccccCCCCCCCCcccccccCCCCCCCcccCCCCCCCceeeeeccCCccchhhhhchhhH
Q 009311 157 RRHERVALPFSTFIGLCKQHKQKMYDGCDDYVEPELHRQVDSNLESPSLLSGDVAPQQLYLAQAPIMSAENEETVQLETL 236 (538)
Q Consensus 157 ~s~~~~~m~f~eFLd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~YL~q~~i~~~~~~e~~~~p~L 236 (538)
+.+.+.|+|++|+++++... +...+|+.+..+-++...+....|.+
T Consensus 80 -~Q~~~~M~l~~y~dY~~~~~---------------------------------re~~lnv~d~efs~~~L~~~~~~P~~ 125 (371)
T 3k3o_A 80 -RQADCKMKLGDFVKYYYSGK---------------------------------REKVLNVISLEFSDTRLSNLVETPKI 125 (371)
T ss_dssp -TTEEEEEEHHHHHHHHTCTT---------------------------------CCSCEEEEEEECTTSGGGGTCBCCHH
T ss_pred -cCCCccccHHHHHHHHhccC---------------------------------CCCceeeechhccchhhhccccCCch
Confidence 23457899999999986421 24589998765544322222345555
Q ss_pred HhhcC-----CCccccccccc-ceEEEEeCCCCCceeeeccCCc--eeEEEEeEEEEEEeCCCCCCC-CccccccCCCCC
Q 009311 237 KEDIA-----TPAFLETKKLA-AINLWMNNAKSKSSAHYDPHHN--LLCIVAGCKQVVLWPPAASPM-LYPMSVYGEASN 307 (538)
Q Consensus 237 ~~Di~-----~P~~l~~~~~~-~~~lWiG~~gs~T~lH~D~~~N--~~~qI~G~Krw~LfPP~~~~~-LYp~p~~~~~~~ 307 (538)
..|+. +|.....+.+. ..++|||++||+|++|+|++.+ |++||+|+|+|+||||.+.+. +|.. +....
T Consensus 126 ~~d~d~~~~~wp~~~~~~rP~~~r~l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~--~~~s~- 202 (371)
T 3k3o_A 126 VRKLSWVENLWPEECVFERPNVQKYCLMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFEC--WSSSS- 202 (371)
T ss_dssp HHHHCHHHHHSCSSCSSCCCCCSCEEEEECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHH--HHTST-
T ss_pred hhhhhhhhhcCChhhhccCCCceeEEEEcCCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCccccccccc--cccCC-
Confidence 55433 22211111222 3589999999999999999854 899999999999999988642 3321 11100
Q ss_pred cccCCCCCCCCCCCCcccccCCccEEEEEcCCCEEecCCCCeEEEeeCCceEEEEEeeCCccc
Q 009311 308 HSSISLENPDFSIYPRAEHSGEYSQKVILHAGDALFIPEGWFHQVDSDDLTIAVNFWWRSSIM 370 (538)
Q Consensus 308 ~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~pGD~LfIP~gWWH~V~s~~~sIaVN~w~~~~~~ 370 (538)
.+.+.|+.... ..+++|+|+|||+||||+||||+|.|.+.||+|+.+|.+..+
T Consensus 203 --------~~~e~~~~~~~--~~~~ev~l~pGEtLfIPsGWwH~V~nledSIai~~NFl~~~n 255 (371)
T 3k3o_A 203 --------NQNEMFFGDQV--DKCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLN 255 (371)
T ss_dssp --------TGGGSCGGGTS--SCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTT
T ss_pred --------ccchhhccccc--CceEEEEECCCcEEEeCCCCeEEEecCCCeEEECCcccchhh
Confidence 11122222222 347999999999999999999999999999999999988643
No 8
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=99.96 E-value=8.6e-30 Score=267.07 Aligned_cols=225 Identities=13% Similarity=0.212 Sum_probs=157.8
Q ss_pred ceeEEeCCCCCCHHHHHHHhhcCCCcEEEecCC---CCcccccCCCCCCCChhhHHHHhC-CCceEEEeccCCCcccCCc
Q 009311 81 EIRSFEFDQLPSATQFASQIESSNIPAVFKGCI---KDWKAFSNWNPTEGGLDYLQERLG-TSVVEAMLSRTAPIFYGDI 156 (538)
Q Consensus 81 ~I~r~~~~~~~S~eeF~~~y~~~~~PVVIrG~~---~~WpA~~kWt~~~~~ldYL~e~~G-d~~V~v~~~~~g~~fy~d~ 156 (538)
.|.+++ .+.++.+-|.+.. -++||||++.. ..||+ .+|| ++|+++.+| +.+|.|....
T Consensus 46 ~v~~i~-g~d~t~~y~~~~~--~~~Pvli~~~~glg~~~P~-~~~t-----v~~v~~~vG~d~~V~ViDv~--------- 107 (397)
T 3kv9_A 46 IIIKMH-GSQLTQRYLEKHG--FDVPIMVPKLDDLGLRLPS-PTFS-----VMDVERYVGGDKVIDVIDVA--------- 107 (397)
T ss_dssp TCEECC-TTTCCHHHHHHHC--SCSCEEESSCTTSCCBCCC-TTCC-----HHHHHHHHTTTSEEEEEETT---------
T ss_pred eeecCC-HHHhhHHHHHhcC--CCCcEEEecCccccCcCCC-CCCC-----HHHHHHHhCCCceEeeeecC---------
Confidence 578882 2578888666543 58999999864 57999 8999 999999999 8999997432
Q ss_pred CccceeeecHHHHHHHHHHhhccccCCCCCCCCcccccccCCCCCCCcccCCCCCCCceeeeeccCCccchhhhhchhhH
Q 009311 157 RRHERVALPFSTFIGLCKQHKQKMYDGCDDYVEPELHRQVDSNLESPSLLSGDVAPQQLYLAQAPIMSAENEETVQLETL 236 (538)
Q Consensus 157 ~s~~~~~m~f~eFLd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~YL~q~~i~~~~~~e~~~~p~L 236 (538)
+.+...|+|++|++++++.. +...+|+.+..+-+....+....|.+
T Consensus 108 -~Q~~~~M~l~~yv~Y~~~~~---------------------------------r~~~lnvislefs~~~L~~~~~~P~~ 153 (397)
T 3kv9_A 108 -RQADSKMTLHNYVKYFMNPN---------------------------------RPKVLNVISLEFSDTKMSELVEVPDI 153 (397)
T ss_dssp -TTEEEEEEHHHHHHHHHCSS---------------------------------CSSCEEEEEEECTTSGGGGGCBCCHH
T ss_pred -cccCccccHHHHHHHHhccC---------------------------------CCccceecchhhccchhccCcCCCce
Confidence 23456899999999986431 24578888766544322222234444
Q ss_pred HhhcC-----CCc-ccccccccceEEEEeCCCCCceeeeccCCc--eeEEEEeEEEEEEeCCCCCC-CCccccccCCCCC
Q 009311 237 KEDIA-----TPA-FLETKKLAAINLWMNNAKSKSSAHYDPHHN--LLCIVAGCKQVVLWPPAASP-MLYPMSVYGEASN 307 (538)
Q Consensus 237 ~~Di~-----~P~-~l~~~~~~~~~lWiG~~gs~T~lH~D~~~N--~~~qI~G~Krw~LfPP~~~~-~LYp~p~~~~~~~ 307 (538)
..|+. +|. .+...+.....+|||++||+|++|+|++.+ |++||.|+|+|+||||.+.+ .+|.. +....
T Consensus 154 v~d~Dwv~~~wp~~~~~~rP~v~r~l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~--~~~s~- 230 (397)
T 3kv9_A 154 AKKLSWVENYWPDDSVFPKPFVQKYCLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYES--WSSSV- 230 (397)
T ss_dssp HHHHCHHHHHCCTTCSSCCCCCSCEEEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHH--HHTSG-
T ss_pred eeccchhhhcCCchhccCCccceeEEEEcCCCCCCCEEECCCCCceeeeecCceEEEEEeCCcccccccccc--cccCC-
Confidence 44332 221 111111234679999999999999999855 99999999999999998764 34431 11000
Q ss_pred cccCCCCCCCCCCCCcccccCCccEEEEEcCCCEEecCCCCeEEEeeCCceEEEEEeeCCccc
Q 009311 308 HSSISLENPDFSIYPRAEHSGEYSQKVILHAGDALFIPEGWFHQVDSDDLTIAVNFWWRSSIM 370 (538)
Q Consensus 308 ~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~pGD~LfIP~gWWH~V~s~~~sIaVN~w~~~~~~ 370 (538)
++.+.|+.... ..+++|+|+|||+||||+||||+|.+.+.||+||.+|.+..+
T Consensus 231 --------~~~e~~~~~~~--~~~~~v~l~pGe~lfIPsGW~H~V~nledSIai~~NFl~~~n 283 (397)
T 3kv9_A 231 --------TQSEVFFGDKV--DKCYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLN 283 (397)
T ss_dssp --------GGGGSCGGGGS--SCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTT
T ss_pred --------Ccchhhhcccc--CceEEEEECCCCEEEeCCCCeEEccCCcCeEEECCcccCchh
Confidence 11122322222 347999999999999999999999999999999999988643
No 9
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=99.96 E-value=1.5e-29 Score=264.58 Aligned_cols=217 Identities=14% Similarity=0.184 Sum_probs=155.7
Q ss_pred CHHHHHHHhhcC---CCcEEEecCC---CCcccccCCCCCCCChhhHHHHhC-CCceEEEeccCCCcccCCcCccceeee
Q 009311 92 SATQFASQIESS---NIPAVFKGCI---KDWKAFSNWNPTEGGLDYLQERLG-TSVVEAMLSRTAPIFYGDIRRHERVAL 164 (538)
Q Consensus 92 S~eeF~~~y~~~---~~PVVIrG~~---~~WpA~~kWt~~~~~ldYL~e~~G-d~~V~v~~~~~g~~fy~d~~s~~~~~m 164 (538)
+.++|..+|+.+ ++|+||++.. ..||+ .+|| ++|+++.+| +.+|.|....+ ...+.|
T Consensus 50 ~g~~f~~~yl~~~g~~~Pvli~~~~glgm~~P~-~~~t-----v~~v~~~vG~d~~V~ViDv~~----------Q~~~~M 113 (392)
T 3pua_A 50 PGSQLTLGYMEEHGFTEPILVPKKDGLGLAVPA-PTFY-----VSDVENYVGPERSVDVTDVTK----------QKDCKM 113 (392)
T ss_dssp CGGGCCHHHHHHHTTCSCEEESSCTTTTCBCCC-TTCC-----HHHHHHHHCTTCEEEEEETTT----------TEEEEE
T ss_pred ChhhchHHHHHhcCCCccEEEeCCccccCcCCC-CCCC-----HHHHHHHcCCCcEEeeeecCc----------CcCccc
Confidence 444444444444 8999999754 68998 7899 999999999 89999874432 345789
Q ss_pred cHHHHHHHHHHhhccccCCCCCCCCcccccccCCCCCCCcccCCCCCCCceeeeeccCCccchhhhhchhhHHhhcC---
Q 009311 165 PFSTFIGLCKQHKQKMYDGCDDYVEPELHRQVDSNLESPSLLSGDVAPQQLYLAQAPIMSAENEETVQLETLKEDIA--- 241 (538)
Q Consensus 165 ~f~eFLd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~YL~q~~i~~~~~~e~~~~p~L~~Di~--- 241 (538)
+|++|++|+++.. +...+|+.+..+-++...+....|.+..|+.
T Consensus 114 ~l~~yv~Y~~~~~---------------------------------re~~lnv~dlefs~t~L~~~~~~P~lv~d~d~v~ 160 (392)
T 3pua_A 114 KLKEFVDYYYSTN---------------------------------RKRVLNVTNLEFSDTRMSSFVEPPDIVKKLSWVE 160 (392)
T ss_dssp EHHHHHHHHTCSS---------------------------------CCSCEEEEEEECTTSGGGGGCBCCHHHHHHCHHH
T ss_pred cHHHHHHHHhccC---------------------------------CCcceEeeecccccchhhccccCchhhhhhhhhh
Confidence 9999999986421 2468999886655443333446788888766
Q ss_pred --CCccccccccc-ceEEEEeCCCCCceeeeccC--CceeEEEEeEEEEEEeCCCCCCC-CccccccCCCCCcccCCCCC
Q 009311 242 --TPAFLETKKLA-AINLWMNNAKSKSSAHYDPH--HNLLCIVAGCKQVVLWPPAASPM-LYPMSVYGEASNHSSISLEN 315 (538)
Q Consensus 242 --~P~~l~~~~~~-~~~lWiG~~gs~T~lH~D~~--~N~~~qI~G~Krw~LfPP~~~~~-LYp~p~~~~~~~~S~Vd~~~ 315 (538)
+|.......+. ..++|||++||+|++|+|++ ++|+++|+|+|+|+||||.+.+. +|.. +.. + .
T Consensus 161 ~~wp~~~~~~rP~v~r~~~mGp~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~--~~~----s-----~ 229 (392)
T 3pua_A 161 NYWPDDALLAKPKVTKYCLICVKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYER--WRS----A-----S 229 (392)
T ss_dssp HHSCTTCSSCCCSCSCEEEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHH--HHH----S-----T
T ss_pred hccchhhhhcCCCceeEEEEeCCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhh--ccc----C-----c
Confidence 33322122222 56899999999999999998 56999999999999999987532 2211 100 1 1
Q ss_pred CCCCCCCcccccCCccEEEEEcCCCEEecCCCCeEEEeeCCceEEEEEeeCCccc
Q 009311 316 PDFSIYPRAEHSGEYSQKVILHAGDALFIPEGWFHQVDSDDLTIAVNFWWRSSIM 370 (538)
Q Consensus 316 pD~~kyP~f~~a~~~~~e~~L~pGD~LfIP~gWWH~V~s~~~sIaVN~w~~~~~~ 370 (538)
.+.+.|+.... ..+++|+|+|||+||||+||||+|.|.+.||||+.+|.+..+
T Consensus 230 ~~~e~~~~~~~--~~~~ev~l~pGEtlfIPsGWwH~V~nledSIai~gNFl~~~n 282 (392)
T 3pua_A 230 NHSEMFFADQV--DKCYKCIVKQGQTLFIPSGWIYATLTPVDCLAFAGHFLHSLS 282 (392)
T ss_dssp TGGGSCGGGGS--SCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCTTC
T ss_pred chhhhhhcccc--cceEEEEECCCcEEeeCCCceEEEecCCCEEEEcCcccChhh
Confidence 11222322222 347999999999999999999999999999999999998643
No 10
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=99.95 E-value=1.2e-28 Score=262.98 Aligned_cols=208 Identities=15% Similarity=0.225 Sum_probs=151.1
Q ss_pred CHHHHHHHhhcC---CCcEEEecC---CCCcccccCCCCCCCChhhHHHHhC-CCceEEEeccCCCcccCCcCccceeee
Q 009311 92 SATQFASQIESS---NIPAVFKGC---IKDWKAFSNWNPTEGGLDYLQERLG-TSVVEAMLSRTAPIFYGDIRRHERVAL 164 (538)
Q Consensus 92 S~eeF~~~y~~~---~~PVVIrG~---~~~WpA~~kWt~~~~~ldYL~e~~G-d~~V~v~~~~~g~~fy~d~~s~~~~~m 164 (538)
+.++|..+|+.+ ++|+||++. -..||+. +|| ++|+++.+| +..|.|.... +.+.+.|
T Consensus 107 ~g~~~~~~~~~~~~~~~Pvli~~~~glgm~~P~~-~~t-----v~~v~~~~G~d~~V~ViDv~----------~Q~~~~M 170 (447)
T 3kv4_A 107 TGNQLTVEFLEENSFSVPILVLKKDGLGMTLPSP-SFT-----VRDVEHYVGSDKEIDVIDVT----------RQADCKM 170 (447)
T ss_dssp CTTTCCHHHHHHTTSCSCEEESSCTTSCCBCCCT-TCC-----HHHHHHHHCTTCEEEEEETT----------TTEEEEE
T ss_pred chhhchHHHHHhcCCCCCEEEecCcccCCcCCCc-cCC-----HHHHHHHcCCCceEcceecC----------cCccccc
Confidence 444444444444 899999954 4689986 899 899999999 8899987432 2345789
Q ss_pred cHHHHHHHHHHhhccccCCCCCCCCcccccccCCCCCCCcccCCCCCCCceeeeeccCCccchhhhhchhhHHhhcCCCc
Q 009311 165 PFSTFIGLCKQHKQKMYDGCDDYVEPELHRQVDSNLESPSLLSGDVAPQQLYLAQAPIMSAENEETVQLETLKEDIATPA 244 (538)
Q Consensus 165 ~f~eFLd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~YL~q~~i~~~~~~e~~~~p~L~~Di~~P~ 244 (538)
+|++|+++++... +...+|+.+..+-+ . .|.++|..|.
T Consensus 171 ~l~~y~dy~~~~~---------------------------------r~~~lnv~d~efs~-------~--~L~~~~~~P~ 208 (447)
T 3kv4_A 171 KLGDFVKYYYSGK---------------------------------REKVLNVISLEFSD-------T--RLSNLVETPK 208 (447)
T ss_dssp EHHHHHHHHHSSC---------------------------------CSSCEEEEEEECTT-------S--GGGGGCBCCH
T ss_pred cHHHHHHHHhccC---------------------------------CCCceeeccccccc-------c--hhhhccCCCc
Confidence 9999999986421 23589998765433 1 5777777777
Q ss_pred cccc--------------ccc-cceEEEEeCCCCCceeeeccCCc--eeEEEEeEEEEEEeCCCCCCCCccccccCCCCC
Q 009311 245 FLET--------------KKL-AAINLWMNNAKSKSSAHYDPHHN--LLCIVAGCKQVVLWPPAASPMLYPMSVYGEASN 307 (538)
Q Consensus 245 ~l~~--------------~~~-~~~~lWiG~~gs~T~lH~D~~~N--~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~ 307 (538)
++.. ..+ ...++|||++||+|++|+|++.+ |+++|.|+|+|+||||.+.. +...+.+..
T Consensus 209 ~~~~~D~~~~lw~~~~~~~rP~v~r~~~mG~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~n-l~~~~~~~~--- 284 (447)
T 3kv4_A 209 IVRKLSWVENLWPEECVFERPNVQKYCLMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNAN-LTLFECWSS--- 284 (447)
T ss_dssp HHHHHCHHHHHCCSCTTSCCCCCSCEEEEECTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHH-HHHHHHHHT---
T ss_pred eecccchhhhcccchhhccCCCceeEEEEeCCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCccc-ccchhhccc---
Confidence 6642 112 24579999999999999999854 99999999999999999653 211111100
Q ss_pred cccCCCCCCCCCCCCcccccCCccEEEEEcCCCEEecCCCCeEEEeeCCceEEEEEeeCCcc
Q 009311 308 HSSISLENPDFSIYPRAEHSGEYSQKVILHAGDALFIPEGWFHQVDSDDLTIAVNFWWRSSI 369 (538)
Q Consensus 308 ~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~pGD~LfIP~gWWH~V~s~~~sIaVN~w~~~~~ 369 (538)
+ ..+.+.|+.... ..+++|+|+|||+||||+||||+|.|.+.||+|+.+|-+..
T Consensus 285 -s-----~~~~~~~~~~~~--~~~~~v~l~pGetlfIPsGWwH~V~nledsIai~~NF~~~~ 338 (447)
T 3kv4_A 285 -S-----SNQNEMFFGDQV--DKCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSL 338 (447)
T ss_dssp -C-----SSGGGSCGGGGS--SCCEEEEEETTCEEEECTTCEEEEEESSCEEEEEEEECCST
T ss_pred -C-----cchhhhhccccc--cceEEEEECCCcEEecCCCCeEEEecCCCEEEEcccccccc
Confidence 0 111223333222 34789999999999999999999999999999999998754
No 11
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=99.94 E-value=3.9e-27 Score=245.06 Aligned_cols=210 Identities=15% Similarity=0.145 Sum_probs=141.4
Q ss_pred CCCCHHHHHHHhhcCCCcEEEecCCCCc-ccccCCCCCCCChhhHHHHhCC-----CceEEEeccC--CCcccCCcCccc
Q 009311 89 QLPSATQFASQIESSNIPAVFKGCIKDW-KAFSNWNPTEGGLDYLQERLGT-----SVVEAMLSRT--APIFYGDIRRHE 160 (538)
Q Consensus 89 ~~~S~eeF~~~y~~~~~PVVIrG~~~~W-pA~~kWt~~~~~ldYL~e~~Gd-----~~V~v~~~~~--g~~fy~d~~s~~ 160 (538)
..+|+++|.++|. .++||||||+ .+| . ..|+ .++|.+.++. ..|.+. +.. ...++. .
T Consensus 26 ~~is~e~F~~~yw-~kkPlvir~~-~~~~~--~l~s-----~~~L~~l~~~~~v~~~~vrl~-~~~~~~~~~~~-----~ 90 (342)
T 1vrb_A 26 SPVTMSEFLEEYW-PVKPLVARGE-VERFT--SIPG-----FEKVRTLENVLAIYNNPVMVV-GDAVIEESEGI-----T 90 (342)
T ss_dssp TTSCHHHHHHHTT-TTSCEEECCC-GGGGG--GSTT-----CGGGSSHHHHHHHCCSCEEEC------------------
T ss_pred cCCCHHHHHHHHh-ccCCEEEcCC-ccccc--CCCC-----HHHHHHHHhhcCcCcCceEEe-CCCcCcccccc-----C
Confidence 7899999999998 7899999999 775 3 3566 3444444432 334432 110 001211 1
Q ss_pred ee-eecHHHHHHHHHHhhccccCCCCCCCCcccccccCCCCCCCcccCCCCCCCceeeeeccCCccchhhhhchhhHHhh
Q 009311 161 RV-ALPFSTFIGLCKQHKQKMYDGCDDYVEPELHRQVDSNLESPSLLSGDVAPQQLYLAQAPIMSAENEETVQLETLKED 239 (538)
Q Consensus 161 ~~-~m~f~eFLd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~YL~q~~i~~~~~~e~~~~p~L~~D 239 (538)
.. .+++++|.+...+ +..+++.+..-.. ..+..|.++
T Consensus 91 ~g~~~~~~~~~~l~~~------------------------------------g~tl~v~~~~~~~------p~l~~l~~~ 128 (342)
T 1vrb_A 91 DRFLVSPAEALEWYEK------------------------------------GAALEFDFTDLFI------PQVRRWIEK 128 (342)
T ss_dssp -CEEECHHHHHHHHHT------------------------------------TCCEEECCGGGTC------THHHHHHHH
T ss_pred CCcccCHHHHHHHHhC------------------------------------CCeEEECChhHhC------hHHHHHHHh
Confidence 12 5678888665432 1245555422111 133455555
Q ss_pred cCC-CcccccccccceE----EEEeCCCCCceeeeccCCceeEEEEeEEEEEEe-CCCCCCCCccccccCCCCCcccCCC
Q 009311 240 IAT-PAFLETKKLAAIN----LWMNNAKSKSSAHYDPHHNLLCIVAGCKQVVLW-PPAASPMLYPMSVYGEASNHSSISL 313 (538)
Q Consensus 240 i~~-P~~l~~~~~~~~~----lWiG~~gs~T~lH~D~~~N~~~qI~G~Krw~Lf-PP~~~~~LYp~p~~~~~~~~S~Vd~ 313 (538)
+.. |.+. ...| +|+|++|+++++|||+++|++|||.|+|+|+|| ||.....+|+... .....+++|+
T Consensus 129 ~~~~~~~~-----~~~n~~~~~~~gp~g~~~~~H~D~~dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~--~~~~~~~~~~ 201 (342)
T 1vrb_A 129 LKAELRLP-----AGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDL--SEAPYYPDDL 201 (342)
T ss_dssp HHHHTTCC-----TTCCEEEEEEEECSSCCCCSEECSSEEEEEEEESCEEEEEECCSSCSSCSSCEEC--C----CCHHH
T ss_pred hhhhcCCc-----ccccccceEEEeCCCCCCCCeECChhcEEEEEEEEEEEEEecCCccccccCcccc--cccccccccc
Confidence 532 2221 1234 999999999999999999999999999999999 9987767776321 1123577888
Q ss_pred CCCCCCCCCcccccCCccEEEEEcCCCEEecCCCCeEEEeeC--CceEEEEEe
Q 009311 314 ENPDFSIYPRAEHSGEYSQKVILHAGDALFIPEGWFHQVDSD--DLTIAVNFW 364 (538)
Q Consensus 314 ~~pD~~kyP~f~~a~~~~~e~~L~pGD~LfIP~gWWH~V~s~--~~sIaVN~w 364 (538)
.+++.++||.++.+ .+++|+|+|||+||||+||||+|.+. +.|++|++.
T Consensus 202 ~~~~~~~~p~~~~~--~~~~~~L~pGD~LyiP~gwwH~v~s~~~~~slsvsi~ 252 (342)
T 1vrb_A 202 QSYWKGDPPKEDLP--DAEIVNLTPGTMLYLPRGLWHSTKSDQATLALNITFG 252 (342)
T ss_dssp HHHCCSCCCCTTCC--SSEEEEECTTCEEEECTTCEEEEECSSCEEEEEEEEC
T ss_pred cccchhhccccccC--CceEEEECCCcEEEeCCCccEEEEECCCCceEEEEEC
Confidence 88888999998763 57999999999999999999999998 367777777
No 12
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=99.82 E-value=1.6e-20 Score=201.05 Aligned_cols=93 Identities=24% Similarity=0.409 Sum_probs=70.1
Q ss_pred ccceEEEEeCCCCCc-eeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCC
Q 009311 251 LAAINLWMNNAKSKS-SAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGE 329 (538)
Q Consensus 251 ~~~~~lWiG~~gs~T-~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~ 329 (538)
....|+|+|++|+.+ ++|||.++|++|||.|+|+|+||+|.+. .+. .+.+|+ ++ .+ . .
T Consensus 138 ~~~~n~y~~~~g~~g~~~H~D~~dvf~~Qv~G~Krw~l~~p~~p-----l~~------~~s~d~--~~--~~---~---~ 196 (442)
T 2xdv_A 138 LVGSNVYITPAGSQGLPPHYDDVEVFILQLEGEKHWRLYHPTVP-----LAR------EYSVEA--EE--RI---G---R 196 (442)
T ss_dssp CCEEEEEEECTTCBCSCSEECSSEEEEEEEESCEEEEEECCSST-----TCS------SCEECC--TT--TS---C---S
T ss_pred CcccceEECCCCCCCccceECCcceEEEEEEeEEEEEEccCCCC-----ccc------cCCCCc--hh--hc---C---C
Confidence 345899999999887 8999999999999999999999999851 111 123442 22 11 1 2
Q ss_pred ccEEEEEcCCCEEecCCCCeEEEeeCC-ceEEEEEe
Q 009311 330 YSQKVILHAGDALFIPEGWFHQVDSDD-LTIAVNFW 364 (538)
Q Consensus 330 ~~~e~~L~pGD~LfIP~gWWH~V~s~~-~sIaVN~w 364 (538)
..++++|+|||+||||+||||+|++.+ .+.|+.+.
T Consensus 197 ~~~~~~L~pGD~LYiP~g~~H~~~s~~~~~~SlhlT 232 (442)
T 2xdv_A 197 PVHEFMLKPGDLLYFPRGTIHQADTPAGLAHSTHVT 232 (442)
T ss_dssp CSEEEEECTTCEEEECTTCEEEEECCSSSCCEEEEE
T ss_pred cceEEEECCCcEEEECCCceEEEEecCCCcceeecc
Confidence 358999999999999999999999864 33444333
No 13
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=99.80 E-value=4.6e-19 Score=190.27 Aligned_cols=210 Identities=16% Similarity=0.199 Sum_probs=137.8
Q ss_pred CHHHHHHHhhcCC------CcEEEec---CCCCcccccCCCCCCCChhhHHHHhC-CCceEEEeccCCCcccCCcCccce
Q 009311 92 SATQFASQIESSN------IPAVFKG---CIKDWKAFSNWNPTEGGLDYLQERLG-TSVVEAMLSRTAPIFYGDIRRHER 161 (538)
Q Consensus 92 S~eeF~~~y~~~~------~PVVIrG---~~~~WpA~~kWt~~~~~ldYL~e~~G-d~~V~v~~~~~g~~fy~d~~s~~~ 161 (538)
+..+|...|...+ +|++|++ +--.-|. ...| ++.+.+..| +.+|.|....+ .+.
T Consensus 152 dG~~f~~~~~~~~g~~~f~~p~lv~~~dgLgm~~P~-~~ft-----v~dV~~~vG~d~~VdVIDV~t----------Q~~ 215 (528)
T 3pur_A 152 DGYEFRREFEKLGGADNWGKVFMVKDMDGLNMTMPK-PGFD-----LEDVVKIMGSDYEVDTIDVYN----------QST 215 (528)
T ss_dssp EHHHHHHHHHHTTCGGGCCSEEEEEECTTSCCCCCC-TTCC-----HHHHHHHHCTTCEEEEEETTT----------TEE
T ss_pred CchhhHHHHHhhcCcccCCeeEEEeccccCCCCCCC-CCCC-----HHHHHHhhCCCceEeeEECCC----------CCC
Confidence 6778888876543 6999984 3223332 1223 789999998 78898874322 334
Q ss_pred eeecHHHHHHHHHHhhccccCCCCCCCCcccccccCCCCCCCcccCCCCCCCceeeeeccCCccchhhhhchhhHHhhcC
Q 009311 162 VALPFSTFIGLCKQHKQKMYDGCDDYVEPELHRQVDSNLESPSLLSGDVAPQQLYLAQAPIMSAENEETVQLETLKEDIA 241 (538)
Q Consensus 162 ~~m~f~eFLd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~YL~q~~i~~~~~~e~~~~p~L~~Di~ 241 (538)
..|+|++|++|+.... .+...+++-+..+-+ .+.|.+.+.
T Consensus 216 ~~mtl~~~~~yf~~~~--------------------------------~R~~i~NviSLEfS~--------~~~L~~~v~ 255 (528)
T 3pur_A 216 YSMKLDTFRKLFRDTK--------------------------------NRPLLYNFLSLEFSD--------NNEMKEIAK 255 (528)
T ss_dssp EEEEHHHHHHHHHCCS--------------------------------CCSSCEEECCEECTT--------STTHHHHSC
T ss_pred CcCcHHHHHHHhcCcc--------------------------------ccceeeEEeeEEecC--------chhhhcccc
Confidence 6799999999986410 123355665544432 233444444
Q ss_pred CCccccc-----------------------------cc-ccceEEEEeCCCCCceeeeccC--CceeEEEEeEEEEEEeC
Q 009311 242 TPAFLET-----------------------------KK-LAAINLWMNNAKSKSSAHYDPH--HNLLCIVAGCKQVVLWP 289 (538)
Q Consensus 242 ~P~~l~~-----------------------------~~-~~~~~lWiG~~gs~T~lH~D~~--~N~~~qI~G~Krw~LfP 289 (538)
.|.++.. .. .....++||++|+.|.+|+|+. ++|++++.|+|+|+|||
T Consensus 256 ~P~~Vr~ld~v~~~Wp~~~~~~~~~~~~~~~~~~~~~rP~v~rf~lmg~~gS~Td~HiD~~gts~w~~v~~GrK~w~L~P 335 (528)
T 3pur_A 256 PPRFVQEISMVNRLWPDVSGAEYIKLLQREEYLPEDQRPKVEQFCLAGMAGSYTDFHVDFGGSSVYYHILKGEKIFYIAA 335 (528)
T ss_dssp CCHHHHHHCHHHHHSCCC-------------CCCGGGSCCCSSEEEEECTTEEEEEECCGGGCEEEEEEEEEEEEEEEEC
T ss_pred CCcEEecccHHHHhcCcccchhhhhhhhcccccccccCCCeeEEEEEeCCCCCCCeeECCCCCceeEEEecceEEEEEeC
Confidence 4433321 01 1135688999999999999997 47999999999999999
Q ss_pred CCCCC-CCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEcCCCEEecCCCCeEEEeeCCceEEEEEeeCCc
Q 009311 290 PAASP-MLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILHAGDALFIPEGWFHQVDSDDLTIAVNFWWRSS 368 (538)
Q Consensus 290 P~~~~-~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~pGD~LfIP~gWWH~V~s~~~sIaVN~w~~~~ 368 (538)
|.... .+|.. +.. +. + ...-|+.... ..+++|+|+|||+||||+||||+|.+.+.||||+.+|-+.
T Consensus 336 Pt~~nl~~y~~--w~~----s~-~----~~~wfgd~l~--~~~~~v~l~pGEtlfIPsGW~HaV~tleDSIaiggNFl~~ 402 (528)
T 3pur_A 336 PTEQNFAAYQA--HET----SP-D----TTTWFGDIAN--GAVKRVVIKEGQTLLIPAGWIHAVLTPVDSLVFGGNFLHL 402 (528)
T ss_dssp CCHHHHHHHHH--HHH----SS-C----CSCCGGGGTT--TCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCG
T ss_pred CCccchhhhhh--hcc----CC-c----hhhhhccccc--ccEEEEEECCCCEEEecCCceEEEecCCCeEEEcCcccch
Confidence 97542 12211 110 11 0 1112222111 2357899999999999999999999999999999999986
Q ss_pred cc
Q 009311 369 IM 370 (538)
Q Consensus 369 ~~ 370 (538)
.+
T Consensus 403 ~n 404 (528)
T 3pur_A 403 GN 404 (528)
T ss_dssp GG
T ss_pred hh
Confidence 43
No 14
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=99.78 E-value=5.7e-18 Score=181.52 Aligned_cols=98 Identities=24% Similarity=0.454 Sum_probs=74.5
Q ss_pred cceEEEEeCCCCCc-eeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCc
Q 009311 252 AAINLWMNNAKSKS-SAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEY 330 (538)
Q Consensus 252 ~~~~lWiG~~gs~T-~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~ 330 (538)
...|+|++++|+.+ ++|||.++|++|||.|+|+|+|++|.....++|.. +..++..++. .+.
T Consensus 164 v~~N~Y~tp~Gs~g~~pH~D~~DvFllQv~G~KrWrL~~P~~~~~~lp~~--------~~~~~~~~~~---------~~p 226 (489)
T 4diq_A 164 AGSNVYLTPPNSQGFAPHYDDIEAFVLQLEGRKLWRVYRPRAPTEELALT--------SSPNFSQDDL---------GEP 226 (489)
T ss_dssp EEEEEEEECSSBCCSCCBCCSSEEEEEEEEECEEEEEECCSSGGGTTCSS--------CCCCCCGGGC---------CCC
T ss_pred ccceEEecCCCcccccCccCCcceEEEEEeeEEEEEEeCCCCccccCCCc--------ccccCCcccc---------cCc
Confidence 45799999999865 99999999999999999999999998765444431 1222222211 123
Q ss_pred cEEEEEcCCCEEecCCCCeEEEeeCC--ceEEEEEeeC
Q 009311 331 SQKVILHAGDALFIPEGWFHQVDSDD--LTIAVNFWWR 366 (538)
Q Consensus 331 ~~e~~L~pGD~LfIP~gWWH~V~s~~--~sIaVN~w~~ 366 (538)
.++++|+|||+||||+||||+|.+.+ .|+.+++-..
T Consensus 227 ~~e~~L~pGDvLYiP~g~~H~~~s~~~~~SlhlTi~~~ 264 (489)
T 4diq_A 227 VLQTVLEPGDLLYFPRGFIHQAECQDGVHSLHLTLSTY 264 (489)
T ss_dssp SEEEEECTTCEEEECTTCEEEEEBCSSCCEEEEEEEEC
T ss_pred ceEEEECCCCEEEECCCCceEEEecCCCceEEEeeccc
Confidence 68999999999999999999999964 5666666543
No 15
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=99.10 E-value=1.3e-10 Score=120.32 Aligned_cols=243 Identities=15% Similarity=0.138 Sum_probs=134.6
Q ss_pred CceeEEeCC-CCCCHHHHHHHhhcCCCcEEEecCCCCcccccCCCCCCCChhhHHHHhCCCceEEEeccCCCcccCCcCc
Q 009311 80 LEIRSFEFD-QLPSATQFASQIESSNIPAVFKGCIKDWKAFSNWNPTEGGLDYLQERLGTSVVEAMLSRTAPIFYGDIRR 158 (538)
Q Consensus 80 ~~I~r~~~~-~~~S~eeF~~~y~~~~~PVVIrG~~~~WpA~~kWt~~~~~ldYL~e~~Gd~~V~v~~~~~g~~fy~d~~s 158 (538)
+.+-++... ..=...-|.+... +++|||++|+...-. ...|+ .+|+...||+..+.+..+.++
T Consensus 10 ~~lL~L~d~~~~~n~~~Fq~hW~-~GePViVs~V~~~~~-~~~W~-----Pe~~~~~~gd~~~~lidC~~~--------- 73 (392)
T 2ypd_A 10 KHILWLKDYKNSSNWKLFKECWK-QGQPAVVSGVHKKMN-ISLWK-----AESISLDFGDHQADLLNCKDS--------- 73 (392)
T ss_dssp TTEEEECCTTCTTHHHHHHHHHT-TTCCEEECCHHHHSC-GGGGS-----HHHHHHHHTTSCCCCEETTTC---------
T ss_pred CceeEecCCCCcccHHHHHHHHh-CCCcEEEechhhhCc-CCccC-----HHHHHHHhcCceeeeeeCCCC---------
Confidence 456666210 1123457888774 899999999866433 25799 599999999988766544332
Q ss_pred cceeeecHHHHHHHHHHhhccccCCCCCCCCcccccccCCCCCCCcccCCCCCCCceeeeeccCCccchhhhhchhhHHh
Q 009311 159 HERVALPFSTFIGLCKQHKQKMYDGCDDYVEPELHRQVDSNLESPSLLSGDVAPQQLYLAQAPIMSAENEETVQLETLKE 238 (538)
Q Consensus 159 ~~~~~m~f~eFLd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~YL~q~~i~~~~~~e~~~~p~L~~ 238 (538)
..+.+++++|.+-+....... .+ ....+..+-|.++|--+ .+.+ .+|...+
T Consensus 74 -~~~~i~v~~Ff~Gf~~~~~r~----------------~~---------~~g~p~~LKLKDWPp~~-~F~e--~lP~~~~ 124 (392)
T 2ypd_A 74 -IISNANVKEFWDGFEEVSKRQ----------------KN---------KSGETVVLKLKDWPSGE-DFKT--MMPARYE 124 (392)
T ss_dssp -CBCSCCHHHHHHTSSBGGGC-------------------------------CCCCEEECSSSBTH-HHHH--HSHHHHH
T ss_pred -ccccCcHHHHhhhccccccCC----------------cC---------CCCCcceeeecCCCChH-HHHH--HhHHHHH
Confidence 234678999998653321100 00 00123456666776432 2333 3444444
Q ss_pred h----cCCCccccccc---------------ccceEEEEeC--------CCCCceeeeccCCceeEEEEeE---------
Q 009311 239 D----IATPAFLETKK---------------LAAINLWMNN--------AKSKSSAHYDPHHNLLCIVAGC--------- 282 (538)
Q Consensus 239 D----i~~P~~l~~~~---------------~~~~~lWiG~--------~gs~T~lH~D~~~N~~~qI~G~--------- 282 (538)
| +++|.|...+. --.+.+||+- ..+.|.||.|..+.++.++.-.
T Consensus 125 df~~~LPlpEYt~p~G~LNLAs~LP~~~~kPDLGPK~YiAYG~~~~~~~~~gvT~LH~DmsDaVNiL~h~~~~~~~~~~~ 204 (392)
T 2ypd_A 125 DLLKSLPLPEYCNPEGKFNLASHLPGFFVRPDLGPRLCSAYGVVAAKDHDIGTTNLHIEVSDVVNILVYVGIAKGNGILS 204 (392)
T ss_dssp HHHHHCSSHHHHSTTCTTCCTTTSCGGGCC---CCEEEEECCSTTTTCTTCCSEEEEECSSEEEEEEEEEECCBCTTCCC
T ss_pred HHHHcCCchHhhCCCccchHHHhCCCCCCCCCCCcchhhhcCcchhcccCCCcceeeeehhhhhhhhheecccCccccch
Confidence 4 45665543210 0124567632 2358999999998776666433
Q ss_pred -----------------------------EEEEEeCCCCCCCCcccc--ccCCCCCcccCCCCCC------CCCCCCc--
Q 009311 283 -----------------------------KQVVLWPPAASPMLYPMS--VYGEASNHSSISLENP------DFSIYPR-- 323 (538)
Q Consensus 283 -----------------------------Krw~LfPP~~~~~LYp~p--~~~~~~~~S~Vd~~~p------D~~kyP~-- 323 (538)
=.|-+|.+.+.+.|-..- ...+. ........+| -+...-+
T Consensus 205 ~~~~l~~~~~~~~d~~~~~r~~~~~~~~GAlW~Ifr~~D~~klr~~L~~~~~e~-~~~~~~~~dPihdq~~yL~~~~r~~ 283 (392)
T 2ypd_A 205 KAGILKKFEEEDLDDILRKRLKDSSEIPGALWHIYAGKDVDKIREFLQKISKEQ-GLEVLPEHDPIRDQSWYVNKKLRQR 283 (392)
T ss_dssp HHHHHHHHHTSCCCHHHHHHHTCTTCCEEEEEEEECGGGHHHHHHHHHHHHHHH-C------CCHHHHTCCCCCHHHHHH
T ss_pred hhhhhhhhhhccccHHHhhhccCCCCCCCceeeeeCHhhHHHHHHHHHHHHHhh-CCCccCCCCcCcCCCEEecHHHHHH
Confidence 234444444333221100 00000 0000000111 0111000
Q ss_pred -ccccCCccEEEEEcCCCEEecCCCCeEEEeeCCceEEEEEeeCCc
Q 009311 324 -AEHSGEYSQKVILHAGDALFIPEGWFHQVDSDDLTIAVNFWWRSS 368 (538)
Q Consensus 324 -f~~a~~~~~e~~L~pGD~LfIP~gWWH~V~s~~~sIaVN~w~~~~ 368 (538)
.++..-.++++++++||++|||+||||||.|+..||+|+..|-+.
T Consensus 284 L~ee~gv~~~~~~Q~~GeavfiPaG~~HQV~Nl~~~i~va~df~sp 329 (392)
T 2ypd_A 284 LLEEYGVRTCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSP 329 (392)
T ss_dssp HHHHHCCCCEEEEEETTCEEEECTTCEEEEEESSEEEEEEEEECCG
T ss_pred HHHhcCCeeEEEEEcCCCEEEecCCCHHHHhcccchhhHhhhhcCh
Confidence 111122478999999999999999999999999999999999984
No 16
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=98.30 E-value=1.9e-05 Score=81.00 Aligned_cols=256 Identities=13% Similarity=0.136 Sum_probs=132.3
Q ss_pred HHHHHHhhcCCCc-EEEecCCCC--cccccCCCCCCCChhhHHHHhCCCceEEEecc---CCCcc---cCCcC---ccce
Q 009311 94 TQFASQIESSNIP-AVFKGCIKD--WKAFSNWNPTEGGLDYLQERLGTSVVEAMLSR---TAPIF---YGDIR---RHER 161 (538)
Q Consensus 94 eeF~~~y~~~~~P-VVIrG~~~~--WpA~~kWt~~~~~ldYL~e~~Gd~~V~v~~~~---~g~~f---y~d~~---s~~~ 161 (538)
..+.+....++.| +||||+++- +.. ...+ .+-|.+..|+..|+|..-. ....+ ++... ...+
T Consensus 26 ~~l~~~~~~~~~pi~vIrgl~~~l~ld~-~lFs-----~~~L~~~~~~~~i~vr~Q~~q~~~~N~~~~~~~~~W~~~~~~ 99 (332)
T 2xxz_A 26 PVLLQFCTDPRNPITVIRGLAGSLRLNL-GLFS-----TKTLVEASGEHTVEVRTQVQQPSDENWDLTGTRQIWPCESSR 99 (332)
T ss_dssp HHHHHHHHCTTCSEEEEESHHHHHTCCG-GGGS-----HHHHHHHHTTCEEEEEEEECCCTTCCBCTTSSSBCSBCCCEE
T ss_pred HHHHHHhcCCCCCeEEEcchhhhhCcCh-hhCC-----HHHHHHhCCCCeeeeeecCCCCCcccccCCCCcccccccccc
Confidence 3455545556899 899998642 221 2334 7899999999888887431 11111 11110 1125
Q ss_pred eeecHHHHHHHHHHhhccccCCCCCCCCcccccccCCCCCCCccc-CCCCCCCceeee-eccCCccchhhhhchhhHHhh
Q 009311 162 VALPFSTFIGLCKQHKQKMYDGCDDYVEPELHRQVDSNLESPSLL-SGDVAPQQLYLA-QAPIMSAENEETVQLETLKED 239 (538)
Q Consensus 162 ~~m~f~eFLd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~YL~-q~~i~~~~~~e~~~~p~L~~D 239 (538)
..+|+++|.+|..+...+.-.+-.....+. .+...+..+...-. ........+..+ ..++-+. +. .-+.+.+=
T Consensus 100 ~~~ti~kya~yq~~~~~e~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~fgtNiDL~~~---~~-w~~q~~el 174 (332)
T 2xxz_A 100 SHTTIAKYAQYQASSFQESLQEEKESEDEE-SEEPDSTTGTPPSSAPDPKNHHIIKFGTNIDLSDA---KR-WKPQLQEL 174 (332)
T ss_dssp EEEEHHHHHHHHHHHHHTTCSCC----------------------------CCEEEEEEEEECCCH---HH-HHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHhhhhhhccc-hhcccccccccccccccccccceeeeeecccCCch---hh-hHHHHHHH
Confidence 689999999987643322100000000000 00000000000000 000001122222 3333321 11 11223322
Q ss_pred cCCCccccc---c-----------cccceEEEEeCCCCCceeeeccC--CceeEEEE-eEEEEEEeCCCCCCCCcccccc
Q 009311 240 IATPAFLET---K-----------KLAAINLWMNNAKSKSSAHYDPH--HNLLCIVA-GCKQVVLWPPAASPMLYPMSVY 302 (538)
Q Consensus 240 i~~P~~l~~---~-----------~~~~~~lWiG~~gs~T~lH~D~~--~N~~~qI~-G~Krw~LfPP~~~~~LYp~p~~ 302 (538)
-.+|.++.. + ....+.++||..+++|+.|.+.. ..++.++. |.|.|+.+|++....+...-
T Consensus 175 ~kLP~~lr~~~~gslL~~~~~~I~Gvn~pqLYig~~gS~t~~H~Ed~~l~SiNynhgp~~~~Wy~VP~e~~~~~e~l~-- 252 (332)
T 2xxz_A 175 LKLPAFMRVTSTGNMLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAFC-- 252 (332)
T ss_dssp TTSCGGGCTTTTCCCSEETTEECCCTTSEEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHH--
T ss_pred hhCcHhhcccCccchhhhcCCcCCCcChhheEeecCcccccceecCCcceeEEeecCCCceEEEEECHHHHHHHHHHH--
Confidence 357777641 1 12346799999999999999864 33444554 78999999988543221100
Q ss_pred CCCCCcccCCCCCCCCCCCCc---ccccCCccEEEEEcCCCEEecCCCCeEEEeeCCceEEEEEeeCCc
Q 009311 303 GEASNHSSISLENPDFSIYPR---AEHSGEYSQKVILHAGDALFIPEGWFHQVDSDDLTIAVNFWWRSS 368 (538)
Q Consensus 303 ~~~~~~S~Vd~~~pD~~kyP~---f~~a~~~~~e~~L~pGD~LfIP~gWWH~V~s~~~sIaVN~w~~~~ 368 (538)
. .-.+|+..- .-+|. +..+.-..+.++++|||.+++++|-+|+|.|.+.|+++.+++...
T Consensus 253 ~----k~~~d~~~~--~~~~~p~~L~~~gIPvyr~~QkpGd~Vi~~PgayH~v~n~G~~~n~awN~a~~ 315 (332)
T 2xxz_A 253 D----RHGVDYLTG--SWWPILDDLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGPL 315 (332)
T ss_dssp H----HTTCCTTTS--CBCCCHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEEESC
T ss_pred H----hcCCchhhc--eecCCHHHHHhCCCCeEEEEECCCCEEEECCCceEEEEecceeeEEEEEeCCC
Confidence 0 000111110 11232 233322357999999999999999999999999988888777764
No 17
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=97.99 E-value=0.00024 Score=77.01 Aligned_cols=249 Identities=14% Similarity=0.130 Sum_probs=128.6
Q ss_pred HHHhhcCCCc-EEEecCCC--CcccccCCCCCCCChhhHHHHhCCCceEEEecc---CCCccc--CCcC----ccceeee
Q 009311 97 ASQIESSNIP-AVFKGCIK--DWKAFSNWNPTEGGLDYLQERLGTSVVEAMLSR---TAPIFY--GDIR----RHERVAL 164 (538)
Q Consensus 97 ~~~y~~~~~P-VVIrG~~~--~WpA~~kWt~~~~~ldYL~e~~Gd~~V~v~~~~---~g~~fy--~d~~----s~~~~~m 164 (538)
.+....++.| +||||++. .|.. ...+ .+-|.+..|+..|+|..-- ....+. +... ...+..+
T Consensus 87 ~~~c~~~~~pi~vIrgl~~~l~ld~-~lFs-----~~~L~~~~~~~~i~vr~Q~~q~~~~N~~~~~~~~~W~~~s~~~~~ 160 (531)
T 3avr_A 87 HQFCTNPNNPVTVIRGLAGALKLDL-GLFS-----TKTLVEANNEHMVEVRTQLLQPADENWDPTGTKKIWHCESNRSHT 160 (531)
T ss_dssp HHHHHCTTCSEEEEETHHHHHTCCG-GGGS-----HHHHHHHCTTCEEEEEEEECCCTTCCBCTTSSSBCSBCCEEEEEE
T ss_pred HHHhcCCCCCeEEEccchhccCcCc-ccCC-----HHHHHHhCCCCeeeeeecCCCCCCcCccccCCceeeeeccccCcc
Confidence 4434345788 89999864 2321 2344 7899999999988887521 111111 1101 1124568
Q ss_pred cHHHHHHHHHHhhccc-c--CCCCC----CCCcccccccCCCCCCCcccCCCCCCCceeeeeccCCccchhhhhchhhHH
Q 009311 165 PFSTFIGLCKQHKQKM-Y--DGCDD----YVEPELHRQVDSNLESPSLLSGDVAPQQLYLAQAPIMSAENEETVQLETLK 237 (538)
Q Consensus 165 ~f~eFLd~~~~~~~~~-~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~YL~q~~i~~~~~~e~~~~p~L~ 237 (538)
|+++|.+|......+. . ..... +..++... + .+.............|-...++.+.. . .-..+.
T Consensus 161 ti~kya~yq~~s~~e~~~~~~e~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~i~fgtNiDL~~~~---~-w~~ql~ 231 (531)
T 3avr_A 161 TIAKYAQYQASSFQESLREENEKRSHHKDHSDSESTS---S--DNSGRRRKGPFKTIKFGTNIDLSDDK---K-WKLQLH 231 (531)
T ss_dssp EHHHHHHHHHHHHHHTC-----------------------------------CCCEEEEEEEEECCCTT---T-THHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccc---c--cchhccccCCCcccccccccCCCchh---h-hHHHHH
Confidence 9999998855322110 0 00000 00000000 0 00000000000112233334443211 1 112333
Q ss_pred hhcCCCccccc---c-----------cccceEEEEeCCCCCceeeeccC--CceeEEE-EeEEEEEEeCCCCCCCCcccc
Q 009311 238 EDIATPAFLET---K-----------KLAAINLWMNNAKSKSSAHYDPH--HNLLCIV-AGCKQVVLWPPAASPMLYPMS 300 (538)
Q Consensus 238 ~Di~~P~~l~~---~-----------~~~~~~lWiG~~gs~T~lH~D~~--~N~~~qI-~G~Krw~LfPP~~~~~LYp~p 300 (538)
+=..+|.++.. + ....+.++||..+++|+.|.+.. ..++-++ -|.|.|+.+|+++...+...-
T Consensus 232 el~kLP~~lr~~~~gslL~~~~~~I~Gvn~pqLYig~~gS~t~~H~E~~~l~SiNynhggg~~~Wy~VP~e~~~k~e~l~ 311 (531)
T 3avr_A 232 ELTKLPAFVRVVSAGNLLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFVVPEGYWGVLNDFC 311 (531)
T ss_dssp HGGGSCGGGCSSCTTCGGGGSCSCCBTTSSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHH
T ss_pred HHHhCCHHHcccCccchhhhcCCCCCCcChhheEeecCcccccceecCCcceeeEeecCCCCeEEEEeCHHHHHHHHHHH
Confidence 33347776651 1 12346799999999999999875 2344444 468999999988643222100
Q ss_pred ccCCCCCcccCCCCCCCCCCCC---cccccCCccEEEEEcCCCEEecCCCCeEEEeeCCceEEEEEeeCCc
Q 009311 301 VYGEASNHSSISLENPDFSIYP---RAEHSGEYSQKVILHAGDALFIPEGWFHQVDSDDLTIAVNFWWRSS 368 (538)
Q Consensus 301 ~~~~~~~~S~Vd~~~pD~~kyP---~f~~a~~~~~e~~L~pGD~LfIP~gWWH~V~s~~~sIaVN~w~~~~ 368 (538)
.. -.+++.. -.-+| .+.++.-..+.++++|||.+++++|-+|+|.|.++|+++.+++...
T Consensus 312 --~k----~~~~~~~--~~~~~~p~~L~~~gIPvyr~vQkpGd~Vi~~PgayH~v~n~G~~~n~awN~a~~ 374 (531)
T 3avr_A 312 --EK----NNLNFLM--GSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNIAWNVGPL 374 (531)
T ss_dssp --HH----TTCCTTT--SCBCCCHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECCS
T ss_pred --HH----cCCChhh--ceeecCHHHHHhCCCCeEEEEECCCCEEEECCCceEEEEecceeeeeEEEeccC
Confidence 00 0111111 01122 1222222357899999999999999999999999999888777763
No 18
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=96.96 E-value=0.0017 Score=69.61 Aligned_cols=107 Identities=13% Similarity=0.151 Sum_probs=70.4
Q ss_pred ceEEEEeCCCCCceeeeccC--CceeEEE-EeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCc---ccc
Q 009311 253 AINLWMNNAKSKSSAHYDPH--HNLLCIV-AGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPR---AEH 326 (538)
Q Consensus 253 ~~~lWiG~~gs~T~lH~D~~--~N~~~qI-~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~---f~~ 326 (538)
.+.++||..|++|+.|.+.. ..++-++ -|.|.|+-+|+++...+-..- . .-.+|+..- .-+|. +.+
T Consensus 236 tpqLYigm~gS~t~wH~Ed~~l~SINynhggg~c~WY~VP~e~~~k~e~l~--~----k~~~d~l~~--~~~pspe~L~k 307 (510)
T 4ask_A 236 TVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAFC--D----RHGVDYLTG--SWWPILDDLYA 307 (510)
T ss_dssp SCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHH--H----HTTCCTTTS--CBCCCHHHHHH
T ss_pred hhheEEccccccccceecCCcceeEEEeecCCceeEEEECHHHHHHHHHHH--H----HhCcchhhc--cccCCHHHHHh
Confidence 46789999999999999874 3455556 458999999988543221100 0 001111110 11221 222
Q ss_pred cCCccEEEEEcCCCEEecCCCCeEEEeeCCceEEEEEeeCC
Q 009311 327 SGEYSQKVILHAGDALFIPEGWFHQVDSDDLTIAVNFWWRS 367 (538)
Q Consensus 327 a~~~~~e~~L~pGD~LfIP~gWWH~V~s~~~sIaVN~w~~~ 367 (538)
+.-..+.++++|||.+++++|-+|+|.|.++++.+.+++-.
T Consensus 308 agIPvyr~iQkPGdfVit~PgtyH~Vqs~Gf~~niaWNvap 348 (510)
T 4ask_A 308 SNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGP 348 (510)
T ss_dssp TTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECB
T ss_pred CCCCeEEEEECCCCEEEECCCceEEEEecCeeeeeEEEecC
Confidence 32235789999999999999999999999997776666554
No 19
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A*
Probab=96.89 E-value=0.0045 Score=63.81 Aligned_cols=164 Identities=12% Similarity=0.071 Sum_probs=89.7
Q ss_pred cceEEEEeCCCCCceeeeccC--CceeEEEEeE-EEEEEeCCCCCCCCccc--cccCCCCCcccCCC-CCCCCCCCCc-c
Q 009311 252 AAINLWMNNAKSKSSAHYDPH--HNLLCIVAGC-KQVVLWPPAASPMLYPM--SVYGEASNHSSISL-ENPDFSIYPR-A 324 (538)
Q Consensus 252 ~~~~lWiG~~gs~T~lH~D~~--~N~~~qI~G~-Krw~LfPP~~~~~LYp~--p~~~~~~~~S~Vd~-~~pD~~kyP~-f 324 (538)
..+.+.||..+|.+.+|.+.. ..++-+..|. |.|+.+|+++...+-.. ..+.... ....++ .....-.-|. +
T Consensus 176 ntP~LYiGm~~Stf~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~k~~~p~~~-~~c~~fL~h~~~lisP~~L 254 (354)
T 3dxt_A 176 NTPYLYFGMWKTTFAWHTEDMDLYSINYLHLGEPKTWYVVPPEHGQRLERLARELFPGSS-RGCGAFLRHKVALISPTVL 254 (354)
T ss_dssp CCCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHHSHHHH-HHCTTGGGGCCEEECHHHH
T ss_pred cceeeeeccccCCCcceecCCcceEEEEEecCCceEEEEeCHHHHHHHHHHHHHhCchhh-hhcHHHHhcCcccCCHHHH
Confidence 457899999999999999864 4567778887 99999999875422110 0000000 000000 0000000111 1
Q ss_pred cccCCccEEEEEcCCCEEecCCCCeEEEeeCCceEEEEEeeCCcccchhhhhhHHHHHHHHHHHHHHHHHHHHHhhCCHH
Q 009311 325 EHSGEYSQKVILHAGDALFIPEGWFHQVDSDDLTIAVNFWWRSSIMSSLSEHMDAYYLRRILRRMMDREMNQALAKASSA 404 (538)
Q Consensus 325 ~~a~~~~~e~~L~pGD~LfIP~gWWH~V~s~~~sIaVN~w~~~~~~~~~~~~~~~~~~r~~l~~l~~~~~~~~~~~lp~~ 404 (538)
++..-....++++|||.+++-++.+|.+.|.++|++.+.+|....=..+...-..+..+. +-+.-.++..++.|-++
T Consensus 255 ~~~GIpv~~~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAvNFA~~~Wl~~g~~A~~C~C~~---~~v~i~~d~~~~~~~~~ 331 (354)
T 3dxt_A 255 KENGIPFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKMASQCSCGE---ARVTFSMDAFVRILQPE 331 (354)
T ss_dssp HHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECCGGGHHHHHHCCCCCSSS---CCCCHHHHHHHHHHCHH
T ss_pred HHCCCceEEEEeCCCcEEEECCCceEEEeeccccHhHhhccCcHHHHHhhhhcccccccC---ccceecHHHHHHhhCHH
Confidence 222223578999999999999999999999999999888887641000000000000000 00000123334555566
Q ss_pred HHHHHHhhcceeccC
Q 009311 405 DRERLKRHACEIHTN 419 (538)
Q Consensus 405 ~r~~w~~~~~~~~~~ 419 (538)
..+.|++.-+..+.+
T Consensus 332 ~~~~w~~~~~~~~~~ 346 (354)
T 3dxt_A 332 RYDLWKRGQDRAVVD 346 (354)
T ss_dssp HHHHHHHHHC-----
T ss_pred HHHHHhcCCceeeec
Confidence 788998887776544
No 20
>3opt_A DNA damage-responsive transcriptional repressor R; RPH1, histone demethylase, catalytic core, oxidoreductase; HET: DNA AKG; 2.20A {Saccharomyces cerevisiae} PDB: 3opw_A*
Probab=94.93 E-value=0.021 Score=59.15 Aligned_cols=111 Identities=15% Similarity=0.154 Sum_probs=71.9
Q ss_pred cceEEEEeCCCCCceeeeccC--CceeEEEEeE-EEEEEeCCCCCCCC-------ccccccCCCCCcccCCC-CCCCCCC
Q 009311 252 AAINLWMNNAKSKSSAHYDPH--HNLLCIVAGC-KQVVLWPPAASPML-------YPMSVYGEASNHSSISL-ENPDFSI 320 (538)
Q Consensus 252 ~~~~lWiG~~gs~T~lH~D~~--~N~~~qI~G~-Krw~LfPP~~~~~L-------Yp~p~~~~~~~~S~Vd~-~~pD~~k 320 (538)
..+.+.+|-.+|.+.+|.+-. ..++-+..|. |.|+.+|+++...+ +|.. +. ...++ .....-.
T Consensus 219 ntP~LYvGm~~Stf~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~k~~~p~~-~~-----~c~~fL~h~~~li 292 (373)
T 3opt_A 219 NDSYLYAGLWKASFSWHLEDQDLYSINYIHFGAPKQWYSIPQEDRFKFYKFMQEQFPEE-AK-----NCPEFLRHKMFLA 292 (373)
T ss_dssp -CCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEECCGGGHHHHHHHHHHSSHHH-HS-----SCSSCTTTSCEEE
T ss_pred chhheeeccccCCcceeecCCcceeEEEeecCCCeEEEEeCHHHHHHHHHHHHHhChhh-hh-----hCHHHhhCCcccC
Confidence 346789999999999999764 3456666665 99999999875422 1110 00 00000 0000001
Q ss_pred CCc-ccccCCccEEEEEcCCCEEecCCCCeEEEeeCCceEEEEEeeCCc
Q 009311 321 YPR-AEHSGEYSQKVILHAGDALFIPEGWFHQVDSDDLTIAVNFWWRSS 368 (538)
Q Consensus 321 yP~-f~~a~~~~~e~~L~pGD~LfIP~gWWH~V~s~~~sIaVN~w~~~~ 368 (538)
-|. ++...-....++++|||.+++=++=+|.+.|.++|++.+.+|...
T Consensus 293 sP~~L~~~GIpv~r~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAvNFA~~ 341 (373)
T 3opt_A 293 SPKLLQENGIRCNEIVHHEGEFMITYPYGYHAGFNYGYNLAESVNFALE 341 (373)
T ss_dssp CHHHHHTTTCCCEEEEECTTCEEEECTTCCEEEEESSSEEEEEEEECCC
T ss_pred CHHHHHhcCCceEEEEECCCCEEEECCCceEEEEecCccHHHHHccCcH
Confidence 121 122222357899999999999999999999999998888777764
No 21
>2ox0_A JMJC domain-containing histone demethylation PROT; double-stranded beta helix, demethylase, oxygenase, SGC, STR genomics, structural genomics consortium, oxidoreductase; HET: MLY ALY OGA; 1.95A {Homo sapiens} PDB: 2oq7_A* 2os2_A* 2ot7_A* 2oq6_A* 2vd7_A* 2ybk_A* 2ybp_A* 2ybs_A* 3njy_A* 3pdq_A* 3u4s_A* 2p5b_A* 2q8c_A* 2q8d_A* 2q8e_A* 2gp5_A* 2gp3_A* 2wwj_A* 2pxj_A* 2xml_A*
Probab=94.27 E-value=0.076 Score=55.33 Aligned_cols=113 Identities=16% Similarity=0.066 Sum_probs=72.6
Q ss_pred cceEEEEeCCCCCceeeeccC--CceeEEEEe-EEEEEEeCCCCCCCCccc-----cccCCCCCcccCCCC-CCCCCCCC
Q 009311 252 AAINLWMNNAKSKSSAHYDPH--HNLLCIVAG-CKQVVLWPPAASPMLYPM-----SVYGEASNHSSISLE-NPDFSIYP 322 (538)
Q Consensus 252 ~~~~lWiG~~gs~T~lH~D~~--~N~~~qI~G-~Krw~LfPP~~~~~LYp~-----p~~~~~~~~S~Vd~~-~pD~~kyP 322 (538)
..+.+.||-.+|.+.+|.+.. ..++.+..| .|.|+-+|+++...+-.. |... .+..++. .-..-.-|
T Consensus 194 n~P~LYiGm~~S~f~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~~~~~P~~~----~~~~~~L~h~~~~isP 269 (381)
T 2ox0_A 194 NTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSA----QSCEAFLRHKMTLISP 269 (381)
T ss_dssp TSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHHSHHHH----HHCTTGGGGSCEEECH
T ss_pred ccceEEeeccccCcCceecCCcceeeEEeecCCceEEEecCHHHHHHHHHHHHHhChhhh----hcchHHhhccccccCH
Confidence 446899999999999998764 345556556 699999999875432110 0000 0000000 00000012
Q ss_pred c-ccccCCccEEEEEcCCCEEecCCCCeEEEeeCCceEEEEEeeCCc
Q 009311 323 R-AEHSGEYSQKVILHAGDALFIPEGWFHQVDSDDLTIAVNFWWRSS 368 (538)
Q Consensus 323 ~-f~~a~~~~~e~~L~pGD~LfIP~gWWH~V~s~~~sIaVN~w~~~~ 368 (538)
. ++...-..+.++++|||.++.=++=+|.+.|.++|++...+|...
T Consensus 270 ~~L~~~GIpv~r~vQ~pGEfViTfP~aYH~gfn~GfN~aEAvNFA~~ 316 (381)
T 2ox0_A 270 LMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATR 316 (381)
T ss_dssp HHHHHTTCCCEEEEECTTCEEEECTTCEEEEEECSSEEEEEEEECCT
T ss_pred HHHHHCCCceEEEEecCCCEEEECCCcEEEeecCcccHHHHhccCcH
Confidence 1 122222357899999999999999999999999999888877763
No 22
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=93.44 E-value=0.24 Score=52.98 Aligned_cols=76 Identities=13% Similarity=0.146 Sum_probs=56.8
Q ss_pred eEEEEeCCCCCceeeeccC-CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccE
Q 009311 254 INLWMNNAKSKSSAHYDPH-HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQ 332 (538)
Q Consensus 254 ~~lWiG~~gs~T~lH~D~~-~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~ 332 (538)
..+-+.+ |+...+|+.+. +-|+.++.|+=++.++.+... ..+
T Consensus 325 a~v~l~p-G~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~------------------------------------~~~ 367 (459)
T 2e9q_A 325 ERGVLYS-NAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQ------------------------------------SVF 367 (459)
T ss_dssp EEEEECT-TCEEEEEEESSCCEEEEEEEEEEEEEEECTTSC------------------------------------EEE
T ss_pred EEEEeeC-CcCccceECCCCCEEEEEEeeEEEEEEEeCCCC------------------------------------EEE
Confidence 3455665 77889999996 689999999999999875410 124
Q ss_pred EEEEcCCCEEecCCCCeEEEeeCCceEEEEEeeC
Q 009311 333 KVILHAGDALFIPEGWFHQVDSDDLTIAVNFWWR 366 (538)
Q Consensus 333 e~~L~pGD~LfIP~gWWH~V~s~~~sIaVN~w~~ 366 (538)
..+|++||+++||.|+.|.+.+.+..+.+=..+.
T Consensus 368 ~~~l~~GDv~v~P~G~~H~~~ng~~~~~~l~~~~ 401 (459)
T 2e9q_A 368 DGEVREGQVLMIPQNFVVIKRASDRGFEWIAFKT 401 (459)
T ss_dssp EEEEETTCEEEECTTCEEEEEEEEEEEEEEEEES
T ss_pred eeEEeCCcEEEECCCCEEEEEeCCCCeEEEEEec
Confidence 5689999999999999999999544444333343
No 23
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=93.02 E-value=0.42 Score=51.84 Aligned_cols=71 Identities=10% Similarity=0.172 Sum_probs=54.2
Q ss_pred eEEEEeCCCCCceeeeccC-CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccE
Q 009311 254 INLWMNNAKSKSSAHYDPH-HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQ 332 (538)
Q Consensus 254 ~~lWiG~~gs~T~lH~D~~-~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~ 332 (538)
..+-|.+ |+..++|+.+. +-|+.++.|+=++.++.+.-. ..+
T Consensus 397 a~v~L~p-Ggm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G~------------------------------------~v~ 439 (531)
T 3fz3_A 397 ERGFFYR-NGIYSPHWNVNAHSVVYVIRGNARVQVVNENGD------------------------------------AIL 439 (531)
T ss_dssp EEEEECT-TCEEEEEEESSCCEEEEEEEEEEEEEEECTTSC------------------------------------EEE
T ss_pred EEEEeec-CccccceEcCCCCEEEEEEeCcEEEEEEeCCCc------------------------------------EEE
Confidence 4455776 66778999986 789999999999999875310 125
Q ss_pred EEEEcCCCEEecCCCCeEEEeeCCceEEE
Q 009311 333 KVILHAGDALFIPEGWFHQVDSDDLTIAV 361 (538)
Q Consensus 333 e~~L~pGD~LfIP~gWWH~V~s~~~sIaV 361 (538)
..+|++||++|||.|+.|...+.+..+.+
T Consensus 440 ~~~L~~GDV~v~P~G~~H~~~ag~e~l~f 468 (531)
T 3fz3_A 440 DQEVQQGQLFIVPQNHGVIQQAGNQGFEY 468 (531)
T ss_dssp EEEEETTCEEEECTTCEEEEEEEEEEEEE
T ss_pred EEEecCCeEEEECCCCeEEEecCCCCEEE
Confidence 68999999999999999977664444444
No 24
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=92.81 E-value=0.18 Score=52.35 Aligned_cols=63 Identities=17% Similarity=0.217 Sum_probs=47.8
Q ss_pred EEEEeCCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEE
Q 009311 255 NLWMNNAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKV 334 (538)
Q Consensus 255 ~lWiG~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~ 334 (538)
.++.=..|..++.|....+.++.++.|+=.++... ..++
T Consensus 106 ~~~~l~PG~~~~~HrH~~~ev~~VleG~G~~~~vd-----------------------------------------G~~~ 144 (368)
T 3nw4_A 106 AIQYLGPRETAPEHRHSQNAFRFVVEGEGVWTVVN-----------------------------------------GDPV 144 (368)
T ss_dssp EEEEECTTCEEEEEEESSCEEEECSSCEEEEEEET-----------------------------------------TEEE
T ss_pred EEEEECCCCccCceecccceEEEEEecceEEEEEC-----------------------------------------CEEE
Confidence 34433457889999998888899999976433321 1368
Q ss_pred EEcCCCEEecCCCCeEEEeeCCce
Q 009311 335 ILHAGDALFIPEGWFHQVDSDDLT 358 (538)
Q Consensus 335 ~L~pGD~LfIP~gWWH~V~s~~~s 358 (538)
.+++||+++||+|.||++.|.+..
T Consensus 145 ~~~~GD~v~iP~g~~H~~~N~gde 168 (368)
T 3nw4_A 145 RMSRGDLLLTPGWCFHGHMNDTDQ 168 (368)
T ss_dssp EEETTCEEEECTTCCEEEEECSSS
T ss_pred EEeCCCEEEECCCCcEEeEeCCCC
Confidence 999999999999999999996443
No 25
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=92.80 E-value=0.57 Score=50.52 Aligned_cols=71 Identities=14% Similarity=0.153 Sum_probs=55.5
Q ss_pred eEEEEeCCCCCceeeeccC-CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccE
Q 009311 254 INLWMNNAKSKSSAHYDPH-HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQ 332 (538)
Q Consensus 254 ~~lWiG~~gs~T~lH~D~~-~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~ 332 (538)
..+=|.+ |+..++|+.+. +-|..++.|+=++.++.|.-. ..+
T Consensus 361 a~v~L~p-Ggm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~------------------------------------~~f 403 (496)
T 3ksc_A 361 EHGSLHK-NAMFVPHYNLNANSIIYALKGRARLQVVNCNGN------------------------------------TVF 403 (496)
T ss_dssp EEEEEET-TCEEEEEEESSCCEEEEEEESEEEEEEECTTSC------------------------------------EEE
T ss_pred EEEEeeC-CeEECCeeCCCCCEEEEEEeceEEEEEEeCCCc------------------------------------EEE
Confidence 4455676 78889999987 679999999999999886410 124
Q ss_pred EEEEcCCCEEecCCCCeEEEeeCCceEEE
Q 009311 333 KVILHAGDALFIPEGWFHQVDSDDLTIAV 361 (538)
Q Consensus 333 e~~L~pGD~LfIP~gWWH~V~s~~~sIaV 361 (538)
..+|++||++|||.|+.|...+.+..+.+
T Consensus 404 ~~~l~~GDV~v~P~G~~H~~~a~~e~~~~ 432 (496)
T 3ksc_A 404 DGELEAGRALTVPQNYAVAAKSLSDRFSY 432 (496)
T ss_dssp EEEEETTCEEEECTTCEEEEEECSSEEEE
T ss_pred EEEecCCeEEEECCCCEEEEEeCCCCEEE
Confidence 67899999999999999988876544443
No 26
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=92.70 E-value=0.39 Score=52.00 Aligned_cols=74 Identities=14% Similarity=0.173 Sum_probs=56.2
Q ss_pred EEEEeCCCCCceeeeccC-CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEE
Q 009311 255 NLWMNNAKSKSSAHYDPH-HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQK 333 (538)
Q Consensus 255 ~lWiG~~gs~T~lH~D~~-~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e 333 (538)
.+-+.+ |+..++|+.+. +-|+.++.|+=++.++.+.- . ..+.
T Consensus 376 ~v~L~P-G~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G--------------------------------~----~~~~ 418 (510)
T 3c3v_A 376 YGNLYR-NALFVPHYNTNAHSIIYALRGRAHVQVVDSNG--------------------------------N----RVYD 418 (510)
T ss_dssp EEEEET-TCEEEEEEESSCCEEEEEEESEEEEEEECTTS--------------------------------C----EEEE
T ss_pred EEEecC-CceecceECCCCCEEEEEEeCEEEEEEEeCCC--------------------------------C----EEEe
Confidence 445666 66889999995 68999999999998876421 0 0245
Q ss_pred EEEcCCCEEecCCCCeEEEeeCCceEEEEEee
Q 009311 334 VILHAGDALFIPEGWFHQVDSDDLTIAVNFWW 365 (538)
Q Consensus 334 ~~L~pGD~LfIP~gWWH~V~s~~~sIaVN~w~ 365 (538)
.+|++||++|||.|+.|.+.|.+..+.+-..+
T Consensus 419 ~~l~~GDv~viP~G~~H~~~Ng~e~l~~l~f~ 450 (510)
T 3c3v_A 419 EELQEGHVLVVPQNFAVAGKSQSDNFEYVAFK 450 (510)
T ss_dssp EEEETTCEEEECTTCEEEEEECSSEEEEEEEE
T ss_pred EEEcCCcEEEECCCCeEEEEeCCCCEEEEEEE
Confidence 68999999999999999999965555554444
No 27
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=92.66 E-value=0.15 Score=47.20 Aligned_cols=63 Identities=21% Similarity=0.210 Sum_probs=46.7
Q ss_pred EEEEeCCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEE
Q 009311 255 NLWMNNAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKV 334 (538)
Q Consensus 255 ~lWiG~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~ 334 (538)
.+-+-+ |+..+.|+-..+=+..++.|+=++.+..|.. ..+.
T Consensus 45 ~~~l~p-g~~~~pHh~~a~E~~yVl~G~~~v~v~~~~~--------------------------------------~~~~ 85 (178)
T 1dgw_A 45 EYCSKP-NTLLLPHHSDSDLLVLVLEGQAILVLVNPDG--------------------------------------RDTY 85 (178)
T ss_dssp EEEECT-TEEEEEEEESSEEEEEEEESEEEEEEEETTE--------------------------------------EEEE
T ss_pred EEEecC-CcEecCcCCCCCEEEEEEeEEEEEEEEeCCC--------------------------------------cEEE
Confidence 344555 4556778322367899999999998875431 1256
Q ss_pred EEcCCCEEecCCCCeEEEeeCC
Q 009311 335 ILHAGDALFIPEGWFHQVDSDD 356 (538)
Q Consensus 335 ~L~pGD~LfIP~gWWH~V~s~~ 356 (538)
.|++||++|||+|.+|...|.+
T Consensus 86 ~l~~GDv~~~P~g~~H~~~N~g 107 (178)
T 1dgw_A 86 KLDQGDAIKIQAGTPFYLINPD 107 (178)
T ss_dssp EEETTEEEEECTTCCEEEEECC
T ss_pred EECCCCEEEECCCCeEEEEeCC
Confidence 9999999999999999999953
No 28
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=92.57 E-value=0.29 Score=50.48 Aligned_cols=61 Identities=15% Similarity=0.218 Sum_probs=47.6
Q ss_pred CCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEcCC
Q 009311 260 NAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILHAG 339 (538)
Q Consensus 260 ~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~pG 339 (538)
++|..+.+|..+..-++.++.|+=++++ + ..++.+++|
T Consensus 276 ~pG~~~~~H~h~~~ev~~v~~G~g~~~v---------------~---------------------------~~~~~~~~G 313 (354)
T 2d40_A 276 PKGFASRVARTTDSTIYHVVEGSGQVII---------------G---------------------------NETFSFSAK 313 (354)
T ss_dssp CTTCBCCCBEESSCEEEEEEEEEEEEEE---------------T---------------------------TEEEEEETT
T ss_pred CCCCCCCceecCCcEEEEEEeCeEEEEE---------------C---------------------------CEEEEEcCC
Confidence 4477788899888889999999888775 0 135799999
Q ss_pred CEEecCCCCeEEEeeCCceEEEE
Q 009311 340 DALFIPEGWFHQVDSDDLTIAVN 362 (538)
Q Consensus 340 D~LfIP~gWWH~V~s~~~sIaVN 362 (538)
|++|||++.||++.|.+....+.
T Consensus 314 D~~~vP~~~~H~~~n~e~~~l~~ 336 (354)
T 2d40_A 314 DIFVVPTWHGVSFQTTQDSVLFS 336 (354)
T ss_dssp CEEEECTTCCEEEEEEEEEEEEE
T ss_pred CEEEECCCCeEEEEeCCCEEEEE
Confidence 99999999999999964433333
No 29
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=92.38 E-value=0.37 Score=48.87 Aligned_cols=76 Identities=14% Similarity=0.271 Sum_probs=50.8
Q ss_pred eEEEEeCCCCCceeeeccC-CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccE
Q 009311 254 INLWMNNAKSKSSAHYDPH-HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQ 332 (538)
Q Consensus 254 ~~lWiG~~gs~T~lH~D~~-~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~ 332 (538)
.++-....|+...+|+... .-++.+|+|+=++.|..+. ++ .
T Consensus 274 ~~ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~----------~~----------------------------~ 315 (369)
T 3st7_A 274 VSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVN----------DD----------------------------E 315 (369)
T ss_dssp EEEEEECTTCEEEEEECSSCCEEEEEEESEEEEEEEETT----------CC----------------------------C
T ss_pred EEEEEecCCceeccccccCcceEEEEEeeeEEEEEEcCC----------CC----------------------------c
Confidence 4455556688888999775 3578999999888886321 11 0
Q ss_pred EEEEcC-C---CEEecCCCCeEEEeeCCceEEEEEeeCC
Q 009311 333 KVILHA-G---DALFIPEGWFHQVDSDDLTIAVNFWWRS 367 (538)
Q Consensus 333 e~~L~p-G---D~LfIP~gWWH~V~s~~~sIaVN~w~~~ 367 (538)
...++. | ++||||+||||...|.+..-+|-..|.+
T Consensus 316 ~~~~~~~~~~~~~~~ip~g~~h~~~n~~~~~~~~~~~~~ 354 (369)
T 3st7_A 316 IIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTIMWVN 354 (369)
T ss_dssp CEEEEEETTBCCEEEECTTEEEEEEECSSSCEEEEEEES
T ss_pred EEEEEecCCcceEEEeCCCceEEeEEcCCCcEEEEEecC
Confidence 133344 6 9999999999999996633334443444
No 30
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=92.25 E-value=0.48 Score=50.91 Aligned_cols=75 Identities=12% Similarity=0.127 Sum_probs=55.6
Q ss_pred eEEEEeCCCCCceeeeccC-CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccE
Q 009311 254 INLWMNNAKSKSSAHYDPH-HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQ 332 (538)
Q Consensus 254 ~~lWiG~~gs~T~lH~D~~-~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~ 332 (538)
..+-+.+ |+..++|+.+. +-|+.++.|+=++.+..+.- . ..+
T Consensus 341 ~~v~l~p-Ga~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G-----------~-------------------------~~~ 383 (476)
T 1fxz_A 341 EFGSLRK-NAMFVPHYNLNANSIIYALNGRALIQVVNCNG-----------E-------------------------RVF 383 (476)
T ss_dssp EEEEECT-TCEEEEEEETTCCEEEEEEESEEEEEEECTTS-----------C-------------------------EEE
T ss_pred EEEEecC-CceecceECCCCCEEEEEEeCEEEEEEEecCC-----------C-------------------------EEe
Confidence 3445666 66899999995 68999999999998876421 0 024
Q ss_pred EEEEcCCCEEecCCCCeEEEeeCCceEEEEEee
Q 009311 333 KVILHAGDALFIPEGWFHQVDSDDLTIAVNFWW 365 (538)
Q Consensus 333 e~~L~pGD~LfIP~gWWH~V~s~~~sIaVN~w~ 365 (538)
..+|++||++|||.|+.|.+.|.+..+.+-..+
T Consensus 384 ~~~l~~GDv~viP~G~~H~~~ng~~~l~~l~f~ 416 (476)
T 1fxz_A 384 DGELQEGRVLIVPQNFVVAARSQSDNFEYVSFK 416 (476)
T ss_dssp EEEEETTCEEEECTTCEEEEEECSTTEEEEEEE
T ss_pred eeEEcCCCEEEECCCCeEEEEeCCCCEEEEEEE
Confidence 568999999999999999999954444443333
No 31
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=91.89 E-value=0.55 Score=47.84 Aligned_cols=71 Identities=13% Similarity=0.282 Sum_probs=52.9
Q ss_pred EEEEeCCCCCceeeecc-CCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEE
Q 009311 255 NLWMNNAKSKSSAHYDP-HHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQK 333 (538)
Q Consensus 255 ~lWiG~~gs~T~lH~D~-~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e 333 (538)
.+-+-+ |...+.|+.+ .+-+..++.|+=++.++.++. ....
T Consensus 56 ~~~l~p-g~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g-------------------------------------~~~~ 97 (361)
T 2vqa_A 56 YMSLEP-GAIRELHWHANAAEWAYVMEGRTRITLTSPEG-------------------------------------KVEI 97 (361)
T ss_dssp EEEECT-TCEEEEEECTTCCEEEEEEESEEEEEEECTTS-------------------------------------CEEE
T ss_pred EEEEcC-CCCCCceeCCCCCEEEEEEEeEEEEEEEeCCC-------------------------------------cEEE
Confidence 344555 5566789888 678999999999999876521 0134
Q ss_pred EEEcCCCEEecCCCCeEEEeeCC--ceEEEEE
Q 009311 334 VILHAGDALFIPEGWFHQVDSDD--LTIAVNF 363 (538)
Q Consensus 334 ~~L~pGD~LfIP~gWWH~V~s~~--~sIaVN~ 363 (538)
..|++||++|||+|.+|...|.+ ....+.+
T Consensus 98 ~~l~~GD~~~ip~g~~H~~~n~~~~~~~~l~v 129 (361)
T 2vqa_A 98 ADVDKGGLWYFPRGWGHSIEGIGPDTAKFLLV 129 (361)
T ss_dssp EEEETTEEEEECTTCEEEEEECSSSCEEEEEE
T ss_pred EEEcCCCEEEECCCCeEEEEeCCCCCEEEEEE
Confidence 79999999999999999999954 4444443
No 32
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=91.87 E-value=0.67 Score=48.11 Aligned_cols=66 Identities=14% Similarity=0.233 Sum_probs=52.9
Q ss_pred EEEeCCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEE
Q 009311 256 LWMNNAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVI 335 (538)
Q Consensus 256 lWiG~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~ 335 (538)
+++=++|..|..|......+++++.|+=+.++ + ..++.
T Consensus 283 ~~~L~pG~~t~~hRht~s~Vy~V~eG~G~~~I------------------------~------------------~~~~~ 320 (368)
T 3nw4_A 283 FHRLRAGTETATRNEVGSTVFQVFEGAGAVVM------------------------N------------------GETTK 320 (368)
T ss_dssp EEEECTTCBCCCEEESSCEEEEEEESCEEEEE------------------------T------------------TEEEE
T ss_pred eEEECCCCccCCeeccccEEEEEEeCcEEEEE------------------------C------------------CEEEE
Confidence 34446789999999999999999999877555 0 13578
Q ss_pred EcCCCEEecCCCCeEEEeeCCceEEEEE
Q 009311 336 LHAGDALFIPEGWFHQVDSDDLTIAVNF 363 (538)
Q Consensus 336 L~pGD~LfIP~gWWH~V~s~~~sIaVN~ 363 (538)
.++||+++||++.||+..|.+.++.+.+
T Consensus 321 w~~gD~fvvP~w~~h~~~n~~~a~Lf~~ 348 (368)
T 3nw4_A 321 LEKGDMFVVPSWVPWSLQAETQFDLFRF 348 (368)
T ss_dssp ECTTCEEEECTTCCEEEEESSSEEEEEE
T ss_pred ecCCCEEEECCCCcEEEEeCCCEEEEEE
Confidence 9999999999999999999877555443
No 33
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=91.84 E-value=0.94 Score=38.43 Aligned_cols=65 Identities=20% Similarity=0.377 Sum_probs=50.0
Q ss_pred CCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEcCC
Q 009311 260 NAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILHAG 339 (538)
Q Consensus 260 ~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~pG 339 (538)
..|...+.|..+..-++.++.|+=.+.+ + .....|++|
T Consensus 49 ~pg~~~~~H~H~~~e~~~vl~G~~~~~~---------------~---------------------------~~~~~l~~G 86 (126)
T 4e2g_A 49 EPNTEMPAHEHPHEQAGVMLEGTLELTI---------------G---------------------------EETRVLRPG 86 (126)
T ss_dssp CTTCEEEEECCSSEEEEEEEEECEEEEE---------------T---------------------------TEEEEECTT
T ss_pred CCCCcCCCccCCCceEEEEEEeEEEEEE---------------C---------------------------CEEEEeCCC
Confidence 4477788999887778999999877654 0 024689999
Q ss_pred CEEecCCCCeEEEeeCCc-eEEEEEeeC
Q 009311 340 DALFIPEGWFHQVDSDDL-TIAVNFWWR 366 (538)
Q Consensus 340 D~LfIP~gWWH~V~s~~~-sIaVN~w~~ 366 (538)
|+++||++=.|.+.+.+. +..+.+...
T Consensus 87 d~~~ip~~~~H~~~~~~~~~~~l~v~~p 114 (126)
T 4e2g_A 87 MAYTIPGGVRHRARTFEDGCLVLDIFSP 114 (126)
T ss_dssp EEEEECTTCCEEEECCTTCEEEEEEEES
T ss_pred CEEEECCCCcEEeEECCCCEEEEEEECC
Confidence 999999999999999665 665555443
No 34
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=91.77 E-value=0.49 Score=49.63 Aligned_cols=55 Identities=11% Similarity=0.189 Sum_probs=41.9
Q ss_pred CCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEcCC
Q 009311 260 NAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILHAG 339 (538)
Q Consensus 260 ~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~pG 339 (538)
+.|..++.|....+.++.++.|+=..++ + ..++.+++|
T Consensus 302 ~PG~~~~~HrH~~~~v~~VleG~G~~~V------------------------~------------------ge~~~~~~G 339 (394)
T 3bu7_A 302 RPGEHTKAHRHTGNVIYNVAKGQGYSIV------------------------G------------------GKRFDWSEH 339 (394)
T ss_dssp CTTCBCCCEEESSCEEEEEEECCEEEEE------------------------T------------------TEEEEECTT
T ss_pred CCCCcCCCcccCCcEEEEEEeCeEEEEE------------------------C------------------CEEEEEeCC
Confidence 4467778888777777888888654333 0 136899999
Q ss_pred CEEecCCCCeEEEeeCC
Q 009311 340 DALFIPEGWFHQVDSDD 356 (538)
Q Consensus 340 D~LfIP~gWWH~V~s~~ 356 (538)
|++|||++.||++.|.+
T Consensus 340 D~~~iP~g~~H~~~N~g 356 (394)
T 3bu7_A 340 DIFCVPAWTWHEHCNTQ 356 (394)
T ss_dssp CEEEECTTCCEEEEECC
T ss_pred CEEEECCCCeEEeEeCC
Confidence 99999999999999854
No 35
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=91.75 E-value=1.2 Score=40.54 Aligned_cols=55 Identities=20% Similarity=0.335 Sum_probs=43.7
Q ss_pred CCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEcCC
Q 009311 260 NAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILHAG 339 (538)
Q Consensus 260 ~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~pG 339 (538)
..|..+++|+....-++.++.|+=.+.+ + ..+..|++|
T Consensus 64 ~pG~~~~~H~H~~~E~~~Vl~G~~~~~i---------------~---------------------------~~~~~l~~G 101 (167)
T 3ibm_A 64 EPGGYTTLERHEHTHVVMVVRGHAEVVL---------------D---------------------------DRVEPLTPL 101 (167)
T ss_dssp CTTCBCCCBBCSSCEEEEEEESEEEEEE---------------T---------------------------TEEEEECTT
T ss_pred CCCCCCCCccCCCcEEEEEEeCEEEEEE---------------C---------------------------CEEEEECCC
Confidence 3466778898877788899999876644 0 125789999
Q ss_pred CEEecCCCCeEEEeeCC
Q 009311 340 DALFIPEGWFHQVDSDD 356 (538)
Q Consensus 340 D~LfIP~gWWH~V~s~~ 356 (538)
|++|||++-+|++.|.+
T Consensus 102 d~i~ip~~~~H~~~n~~ 118 (167)
T 3ibm_A 102 DCVYIAPHAWHQIHATG 118 (167)
T ss_dssp CEEEECTTCCEEEEEES
T ss_pred CEEEECCCCcEEEEeCC
Confidence 99999999999999854
No 36
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=91.65 E-value=1.4 Score=36.60 Aligned_cols=64 Identities=13% Similarity=0.259 Sum_probs=48.0
Q ss_pred CCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEcCC
Q 009311 260 NAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILHAG 339 (538)
Q Consensus 260 ~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~pG 339 (538)
+.|...+.|.....-+..++.|+=.+.+ + .....|+||
T Consensus 48 ~~g~~~~~H~H~~~e~~~vl~G~~~~~~---------------~---------------------------~~~~~l~~G 85 (115)
T 1yhf_A 48 DKGQEIGRHSSPGDAMVTILSGLAEITI---------------D---------------------------QETYRVAEG 85 (115)
T ss_dssp CTTCEEEEECCSSEEEEEEEESEEEEEE---------------T---------------------------TEEEEEETT
T ss_pred CCCCccCCEECCCcEEEEEEeCEEEEEE---------------C---------------------------CEEEEECCC
Confidence 3466778898777778889999877654 0 024689999
Q ss_pred CEEecCCCCeEEEeeCCceEEEEEee
Q 009311 340 DALFIPEGWFHQVDSDDLTIAVNFWW 365 (538)
Q Consensus 340 D~LfIP~gWWH~V~s~~~sIaVN~w~ 365 (538)
|+++||++=.|.+.+.+.+..+.+.+
T Consensus 86 d~~~ip~~~~H~~~~~~~~~~~~v~~ 111 (115)
T 1yhf_A 86 QTIVMPAGIPHALYAVEAFQMLLVVV 111 (115)
T ss_dssp CEEEECTTSCEEEEESSCEEEEEEEE
T ss_pred CEEEECCCCCEEEEECCCceEEEEEE
Confidence 99999999999999976554444433
No 37
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=91.63 E-value=0.58 Score=50.07 Aligned_cols=73 Identities=12% Similarity=0.161 Sum_probs=55.7
Q ss_pred eEEEEeCCCCCceeeeccC-CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccE
Q 009311 254 INLWMNNAKSKSSAHYDPH-HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQ 332 (538)
Q Consensus 254 ~~lWiG~~gs~T~lH~D~~-~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~ 332 (538)
..+=+.+ |+..++|+.+. +-|..++.|+=++.++.|.-. ..+
T Consensus 326 a~v~L~p-Ggm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~------------------------------------~~f 368 (466)
T 3kgl_A 326 LRGSIRQ-NAMVLPQWNANANAVLYVTDGEAHVQVVNDNGD------------------------------------RVF 368 (466)
T ss_dssp EEEEEET-TEEEEEEEESSCCEEEEEEESEEEEEEECTTSC------------------------------------EEE
T ss_pred EEEEeec-CcEeeeeECCCCCEEEEEEeceEEEEEEeCCCc------------------------------------EEE
Confidence 4556776 77889999987 679999999999999886410 124
Q ss_pred EEEEcCCCEEecCCCCeEEEeeCCc-eEEEEE
Q 009311 333 KVILHAGDALFIPEGWFHQVDSDDL-TIAVNF 363 (538)
Q Consensus 333 e~~L~pGD~LfIP~gWWH~V~s~~~-sIaVN~ 363 (538)
..+|++||++|||.|++|...+.+. ...|.+
T Consensus 369 ~~~l~~GDV~v~P~G~~H~~~ag~e~~~~l~~ 400 (466)
T 3kgl_A 369 DGQVSQGQLLSIPQGFSVVKRATSEQFRWIEF 400 (466)
T ss_dssp EEEEETTCEEEECTTCEEEEEECSSEEEEEEE
T ss_pred EeEecCCcEEEECCCCeEEEEcCCCCEEEEEE
Confidence 6789999999999999999866443 333443
No 38
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=91.54 E-value=0.64 Score=43.69 Aligned_cols=75 Identities=16% Similarity=0.185 Sum_probs=53.8
Q ss_pred EEEeCCCCCceeeeccC-CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEE
Q 009311 256 LWMNNAKSKSSAHYDPH-HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKV 334 (538)
Q Consensus 256 lWiG~~gs~T~lH~D~~-~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~ 334 (538)
+-+.+ |...+.|+.+. .-+..++.|+=++.+..+.. .+ ...+..
T Consensus 77 ~~l~p-g~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~---------~~-------------------------~~~~~~ 121 (201)
T 1fi2_A 77 VDFAP-GGTNPPHIHPRATEIGMVMKGELLVGILGSLD---------SG-------------------------NKLYSR 121 (201)
T ss_dssp EEECT-TCEEEEEECTTCCEEEEEEESEEEEEEECCGG---------GT-------------------------TCEEEE
T ss_pred EEECC-CCCCCCeECCCCCEEEEEEeCEEEEEEEcCCC---------CC-------------------------CeEEEE
Confidence 44555 56788999885 58999999999888765420 00 012468
Q ss_pred EEcCCCEEecCCCCeEEEeeC--CceEEEEEee
Q 009311 335 ILHAGDALFIPEGWFHQVDSD--DLTIAVNFWW 365 (538)
Q Consensus 335 ~L~pGD~LfIP~gWWH~V~s~--~~sIaVN~w~ 365 (538)
+|++||+++||+|-+|...|. +....+.++.
T Consensus 122 ~l~~GD~~~iP~g~~H~~~N~g~~~~~~l~v~~ 154 (201)
T 1fi2_A 122 VVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFN 154 (201)
T ss_dssp EEETTCEEEECTTCCEEEEECSSSCEEEEEEES
T ss_pred EECCCCEEEECCCCeEEEEeCCCCCEEEEEEEC
Confidence 999999999999999999984 3444555543
No 39
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=91.49 E-value=1 Score=40.77 Aligned_cols=53 Identities=25% Similarity=0.345 Sum_probs=42.1
Q ss_pred CCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEcCCCE
Q 009311 262 KSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILHAGDA 341 (538)
Q Consensus 262 gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~pGD~ 341 (538)
|..++.|.....-++.++.|+=.+++ + ..+..|+|||+
T Consensus 54 G~~~~~H~H~~~E~~~Vl~G~~~v~v---------------~---------------------------g~~~~l~~Gd~ 91 (156)
T 3kgz_A 54 GGYSTLERHAHVHAVMIHRGHGQCLV---------------G---------------------------ETISDVAQGDL 91 (156)
T ss_dssp EEECCCBBCSSCEEEEEEEEEEEEEE---------------T---------------------------TEEEEEETTCE
T ss_pred CCccCceeCCCcEEEEEEeCEEEEEE---------------C---------------------------CEEEEeCCCCE
Confidence 55677888877778889999877654 0 12578999999
Q ss_pred EecCCCCeEEEeeCC
Q 009311 342 LFIPEGWFHQVDSDD 356 (538)
Q Consensus 342 LfIP~gWWH~V~s~~ 356 (538)
+|||++-+|++.|.+
T Consensus 92 i~ip~~~~H~~~n~g 106 (156)
T 3kgz_A 92 VFIPPMTWHQFRANR 106 (156)
T ss_dssp EEECTTCCEEEECCS
T ss_pred EEECCCCcEEeEeCC
Confidence 999999999999843
No 40
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=91.28 E-value=1.2 Score=37.02 Aligned_cols=64 Identities=20% Similarity=0.297 Sum_probs=48.5
Q ss_pred EeCCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEc
Q 009311 258 MNNAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILH 337 (538)
Q Consensus 258 iG~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~ 337 (538)
+.+ |...+.|..+..-++.++.|+=.+.+ . .....|+
T Consensus 41 ~~p-g~~~~~H~H~~~e~~~vl~G~~~~~~-~-----------------------------------------~~~~~l~ 77 (116)
T 2pfw_A 41 FDK-GAEGYVHAHRHSQVSYVVEGEFHVNV-D-----------------------------------------GVIKVLT 77 (116)
T ss_dssp ECT-TEEEEEECCSSEEEEEEEEECEEEEE-T-----------------------------------------TEEEEEC
T ss_pred ECC-CCcCCcEECCcceEEEEEeeEEEEEE-C-----------------------------------------CEEEEeC
Confidence 444 55678888877778889999877655 0 0246899
Q ss_pred CCCEEecCCCCeEEEeeCCceEEEEEe
Q 009311 338 AGDALFIPEGWFHQVDSDDLTIAVNFW 364 (538)
Q Consensus 338 pGD~LfIP~gWWH~V~s~~~sIaVN~w 364 (538)
|||+++||++-.|.+.+.+.+..+.+.
T Consensus 78 ~Gd~~~ip~~~~H~~~~~~~~~~l~v~ 104 (116)
T 2pfw_A 78 AGDSFFVPPHVDHGAVCPTGGILIDTF 104 (116)
T ss_dssp TTCEEEECTTCCEEEEESSCEEEEEEE
T ss_pred CCCEEEECcCCceeeEeCCCcEEEEEE
Confidence 999999999999999997766555554
No 41
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=90.98 E-value=1.3 Score=35.43 Aligned_cols=55 Identities=22% Similarity=0.323 Sum_probs=41.7
Q ss_pred CCCCCceeeeccC-CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEcC
Q 009311 260 NAKSKSSAHYDPH-HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILHA 338 (538)
Q Consensus 260 ~~gs~T~lH~D~~-~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~p 338 (538)
..|...+.|+... .-++.++.|+=.+.+ + .....|++
T Consensus 36 ~pg~~~~~H~H~~~~e~~~v~~G~~~~~~---------------~---------------------------~~~~~l~~ 73 (105)
T 1v70_A 36 LPGQAQKVHVHEGSDKVYYALEGEVVVRV---------------G---------------------------EEEALLAP 73 (105)
T ss_dssp CTTCEEEEECCSSCEEEEEEEESCEEEEE---------------T---------------------------TEEEEECT
T ss_pred CCCCcCCccCCCCCcEEEEEEeCEEEEEE---------------C---------------------------CEEEEeCC
Confidence 3366678898664 458888999876554 0 02468999
Q ss_pred CCEEecCCCCeEEEeeCC
Q 009311 339 GDALFIPEGWFHQVDSDD 356 (538)
Q Consensus 339 GD~LfIP~gWWH~V~s~~ 356 (538)
||+++||++-+|.+.+.+
T Consensus 74 Gd~~~ip~~~~H~~~~~~ 91 (105)
T 1v70_A 74 GMAAFAPAGAPHGVRNES 91 (105)
T ss_dssp TCEEEECTTSCEEEECCS
T ss_pred CCEEEECCCCcEEeEeCC
Confidence 999999999999999854
No 42
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=90.98 E-value=0.68 Score=47.70 Aligned_cols=67 Identities=16% Similarity=0.281 Sum_probs=51.0
Q ss_pred eEEEEeCCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEE
Q 009311 254 INLWMNNAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQK 333 (538)
Q Consensus 254 ~~lWiG~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e 333 (538)
..+-+.+ |...+.|+.+..-+..++.|+=++.+...+ | ....
T Consensus 82 ~~~~l~p-g~~~~~H~H~~~E~~~Vl~G~~~~~~~~~~-----------g--------------------------~~~~ 123 (385)
T 1j58_A 82 VNMRLKP-GAIRELHWHKEAEWAYMIYGSARVTIVDEK-----------G--------------------------RSFI 123 (385)
T ss_dssp EEEEECT-TCEEEEEEESSCEEEEEEEEEEEEEEECTT-----------S--------------------------CEEE
T ss_pred EEEEECC-CCCCCCccCChheEEEEEeeeEEEEEEeCC-----------C--------------------------cEEE
Confidence 3445666 557788998888899999999988876431 0 0124
Q ss_pred EEEcCCCEEecCCCCeEEEeeCCce
Q 009311 334 VILHAGDALFIPEGWFHQVDSDDLT 358 (538)
Q Consensus 334 ~~L~pGD~LfIP~gWWH~V~s~~~s 358 (538)
..|++||++|||++.+|...+.+..
T Consensus 124 ~~l~~GD~~~ip~g~~H~~~n~~~~ 148 (385)
T 1j58_A 124 DDVGEGDLWYFPSGLPHSIQALEEG 148 (385)
T ss_dssp EEEETTEEEEECTTCCEEEEEEEEE
T ss_pred EEeCCCCEEEECCCCeEEEEECCCC
Confidence 5899999999999999999996543
No 43
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=90.79 E-value=0.7 Score=47.06 Aligned_cols=69 Identities=14% Similarity=0.355 Sum_probs=50.2
Q ss_pred EeCCCCCceeeeccC-CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEE
Q 009311 258 MNNAKSKSSAHYDPH-HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVIL 336 (538)
Q Consensus 258 iG~~gs~T~lH~D~~-~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L 336 (538)
+.+ |...+.|+.+. +-++.++.|+=++.++.++. + .....|
T Consensus 241 l~p-g~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g--------------------------------~-----~~~~~l 282 (361)
T 2vqa_A 241 LEP-GAMRQLHWHPNADEWQYVLDGEMDLTVFASEG--------------------------------K-----ASVSRL 282 (361)
T ss_dssp ECT-TCEEEEEECSSCCEEEEEEESCEEEEEECSTT--------------------------------C-----EEEEEE
T ss_pred ECC-CcccccccCCCCCEEEEEEeCEEEEEEEcCCC--------------------------------c-----EEEEEE
Confidence 444 56777788876 77889999998888865310 0 135799
Q ss_pred cCCCEEecCCCCeEEEeeCC--ceEEEEEe
Q 009311 337 HAGDALFIPEGWFHQVDSDD--LTIAVNFW 364 (538)
Q Consensus 337 ~pGD~LfIP~gWWH~V~s~~--~sIaVN~w 364 (538)
++||++|||++.+|...|.+ ....+.+.
T Consensus 283 ~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~ 312 (361)
T 2vqa_A 283 QQGDVGYVPKGYGHAIRNSSQKPLDIVVVF 312 (361)
T ss_dssp CTTCEEEECTTCEEEEECCSSSCEEEEEEE
T ss_pred CCCCEEEECCCCeEEeEECCCCCEEEEEEE
Confidence 99999999999999999953 34444443
No 44
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=90.71 E-value=0.77 Score=42.75 Aligned_cols=83 Identities=14% Similarity=0.125 Sum_probs=50.4
Q ss_pred EEEeCCCCCceeeeccC--------CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCccccc
Q 009311 256 LWMNNAKSKSSAHYDPH--------HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHS 327 (538)
Q Consensus 256 lWiG~~gs~T~lH~D~~--------~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a 327 (538)
+.+-+ |..+|+|+.+. +.|. ++.|.=++++ +..... ...|-+.+-....|+
T Consensus 58 l~l~p-GQ~~P~H~H~~~~~~~gK~E~~i-vr~G~v~l~~--~g~~~~------------~~~v~v~dg~~~~~~----- 116 (175)
T 2y0o_A 58 LVLFP-GQTCPEHRHPPVDGQEGKQETFR-CRYGKVYLYV--EGEKTP------------LPKVLPPQEDREHYT----- 116 (175)
T ss_dssp EEECT-TCEEEEEECCCCTTSCCCCEEEE-EEEEEEEEEE--SSSCCS------------SCSCCCCGGGGGGCC-----
T ss_pred EEECC-CCcCCceECCCCCCCCCCceeEE-EecCEEEEEE--CCcccc------------CcceeccCCceeeec-----
Confidence 44444 89999999998 7788 6678744444 322110 011111110011222
Q ss_pred CCccEEEEEcCCCEEecCCCCeEEEeeCCceEEE
Q 009311 328 GEYSQKVILHAGDALFIPEGWFHQVDSDDLTIAV 361 (538)
Q Consensus 328 ~~~~~e~~L~pGD~LfIP~gWWH~V~s~~~sIaV 361 (538)
..-+++|+|||.+.||+|=||...+.+..+-|
T Consensus 117 --a~~~i~L~pGesvtIppg~~H~f~ageegvli 148 (175)
T 2y0o_A 117 --VWHEIELEPGGQYTIPPNTKHWFQAGEEGAVV 148 (175)
T ss_dssp --CCEEEEECTTCEEEECTTCCEEEEEEEEEEEE
T ss_pred --CCcEEEECCCCEEEECCCCcEEEEeCCCCEEE
Confidence 23578999999999999999999994444333
No 45
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=90.51 E-value=0.84 Score=48.81 Aligned_cols=69 Identities=13% Similarity=0.193 Sum_probs=53.2
Q ss_pred EEEEeCCCCCceeeeccC-CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEE
Q 009311 255 NLWMNNAKSKSSAHYDPH-HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQK 333 (538)
Q Consensus 255 ~lWiG~~gs~T~lH~D~~-~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e 333 (538)
.+=+.+ |+..++|+.+. +-|..++.|+=++.++.|.-. ..+.
T Consensus 327 ~v~l~p-Ggm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~------------------------------------~~f~ 369 (465)
T 3qac_A 327 KGVLYR-NAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQGQ------------------------------------SVFD 369 (465)
T ss_dssp EEEECT-TCEEEEEEESSCCEEEEEEEEEEEEEEECTTSC------------------------------------EEEE
T ss_pred EEEecC-CcEeeeEECCCCCEEEEEEeCCEEEEEEeCCCc------------------------------------EEEE
Confidence 344666 67889999997 679999999999999886410 0246
Q ss_pred EEEcCCCEEecCCCCeEEEeeCCceEE
Q 009311 334 VILHAGDALFIPEGWFHQVDSDDLTIA 360 (538)
Q Consensus 334 ~~L~pGD~LfIP~gWWH~V~s~~~sIa 360 (538)
.+|++||+++||.|+.|...+.+..+.
T Consensus 370 ~~l~~GDVfvvP~g~~h~~~ag~e~~~ 396 (465)
T 3qac_A 370 EELSRGQLVVVPQNFAIVKQAFEDGFE 396 (465)
T ss_dssp EEEETTCEEEECTTCEEEEEEEEEEEE
T ss_pred EEecCCeEEEECCCcEEEEEcCCCCeE
Confidence 789999999999999998876443333
No 46
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=90.23 E-value=0.92 Score=48.91 Aligned_cols=76 Identities=11% Similarity=0.181 Sum_probs=55.6
Q ss_pred EEEEeCCCCCceeeeccC-CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEE
Q 009311 255 NLWMNNAKSKSSAHYDPH-HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQK 333 (538)
Q Consensus 255 ~lWiG~~gs~T~lH~D~~-~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e 333 (538)
.+-+.+ |+..++|+.+. +-++.++.|+=++.+..+.. . ..+.
T Consensus 371 ~v~l~p-G~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g--------------------------------~----~~~~ 413 (493)
T 2d5f_A 371 YVVLYR-NGIYSPHWNLNANSVIYVTRGKGRVRVVNAQG--------------------------------N----AVFD 413 (493)
T ss_dssp EEEECT-TCEEEEEEESSCCEEEEEEEEEEEEEEECTTS--------------------------------C----EEEE
T ss_pred EEEccC-CceeeeeECCCCCEEEEEEeceEEEEEEcCCC--------------------------------C----EEEe
Confidence 344666 66889999985 67999999999988875421 0 1235
Q ss_pred EEEcCCCEEecCCCCeEEEeeCCceEEEEEeeCC
Q 009311 334 VILHAGDALFIPEGWFHQVDSDDLTIAVNFWWRS 367 (538)
Q Consensus 334 ~~L~pGD~LfIP~gWWH~V~s~~~sIaVN~w~~~ 367 (538)
.+|++||++|||+|..|...+.+..+.+=..+.+
T Consensus 414 ~~l~~GDv~vvP~G~~H~~~n~~e~~~~l~~~ts 447 (493)
T 2d5f_A 414 GELRRGQLLVVPQNFVVAEQGGEQGLEYVVFKTH 447 (493)
T ss_dssp EEEETTCEEEECTTCEEEEEEEEEEEEEEEEESS
T ss_pred EEEcCCCEEEECCCCeEeeeeCCCCEEEEEEECC
Confidence 6899999999999999999986544444444433
No 47
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=90.05 E-value=0.77 Score=48.10 Aligned_cols=62 Identities=23% Similarity=0.298 Sum_probs=47.8
Q ss_pred EEEEeCCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEE
Q 009311 255 NLWMNNAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKV 334 (538)
Q Consensus 255 ~lWiG~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~ 334 (538)
.++.=..|..++.|....+.++.+|.|+=.++... ..++
T Consensus 126 ~~~~l~PG~~~~~HrH~~~ev~~IleG~G~~t~v~-----------------------------------------G~~~ 164 (394)
T 3bu7_A 126 GIQTMKAGERAGAHRHAASALRFIMEGSGAYTIVD-----------------------------------------GHKV 164 (394)
T ss_dssp EEEEECTTCBCCCEEESSCEEEEEEECSCEEEEET-----------------------------------------TEEE
T ss_pred EEEEECCCCCcCCccCCcceEEEEEEeeEEEEEEC-----------------------------------------CEEE
Confidence 44444458888999998888999999965443321 1368
Q ss_pred EEcCCCEEecCCCCeEEEee-CCc
Q 009311 335 ILHAGDALFIPEGWFHQVDS-DDL 357 (538)
Q Consensus 335 ~L~pGD~LfIP~gWWH~V~s-~~~ 357 (538)
.+++||++++|+|.||...| .+.
T Consensus 165 ~~~~GD~i~~P~g~~H~~~N~~gd 188 (394)
T 3bu7_A 165 ELGANDFVLTPNGTWHEHGILESG 188 (394)
T ss_dssp EECTTCEEEECTTCCEEEEECTTC
T ss_pred EEcCCCEEEECcCCCEEEEcCCCC
Confidence 99999999999999999999 654
No 48
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=89.98 E-value=2.2 Score=36.02 Aligned_cols=61 Identities=20% Similarity=0.229 Sum_probs=47.1
Q ss_pred CCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEcCC
Q 009311 260 NAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILHAG 339 (538)
Q Consensus 260 ~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~pG 339 (538)
++|...+.|..+..-++.++.|+=++.+ + ..+..|+||
T Consensus 44 ~~G~~~~~H~H~~~e~~~Vl~G~~~~~i---------------~---------------------------~~~~~l~~G 81 (114)
T 3fjs_A 44 PAGKQVGSHSVAGPSTIQCLEGEVEIGV---------------D---------------------------GAQRRLHQG 81 (114)
T ss_dssp CTTCEEEEECCSSCEEEEEEESCEEEEE---------------T---------------------------TEEEEECTT
T ss_pred CCCCccCceeCCCcEEEEEEECEEEEEE---------------C---------------------------CEEEEECCC
Confidence 4477888998877778888888877654 0 125789999
Q ss_pred CEEecCCCCeEEEeeCCceEEEE
Q 009311 340 DALFIPEGWFHQVDSDDLTIAVN 362 (538)
Q Consensus 340 D~LfIP~gWWH~V~s~~~sIaVN 362 (538)
|+++||++=.|.+.+.+.+..+.
T Consensus 82 d~i~ip~~~~H~~~~~~~~~~~~ 104 (114)
T 3fjs_A 82 DLLYLGAGAAHDVNAITNTSLLV 104 (114)
T ss_dssp EEEEECTTCCEEEEESSSEEEEE
T ss_pred CEEEECCCCcEEEEeCCCcEEEE
Confidence 99999999999999976554443
No 49
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=89.78 E-value=3.5 Score=38.21 Aligned_cols=75 Identities=17% Similarity=0.180 Sum_probs=53.7
Q ss_pred cceEEEEeCCCCCceeeeccC-CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCc
Q 009311 252 AAINLWMNNAKSKSSAHYDPH-HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEY 330 (538)
Q Consensus 252 ~~~~lWiG~~gs~T~lH~D~~-~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~ 330 (538)
...|+-.+.+|+.-.+|+... .-++.+++|+=..+++.-... . |.|.+
T Consensus 53 ~Q~n~s~s~~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R~~-----S----------------------pTfg~---- 101 (174)
T 3ejk_A 53 GEIYFSEVLPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREK-----S----------------------PTSGR---- 101 (174)
T ss_dssp CEEEEEEECBTCEEEEEEESSCCEEEEEEESEEEEEEECCCTT-----C----------------------TTTTC----
T ss_pred eEEEEEECCCCCEECcEecCCCceEEEEEeeEEEEEEEeCCCC-----C----------------------CCCCe----
Confidence 345655677789999999865 456788899999998763210 0 11221
Q ss_pred cEEEEEc---CCCEEecCCCCeEEEeeCCc
Q 009311 331 SQKVILH---AGDALFIPEGWFHQVDSDDL 357 (538)
Q Consensus 331 ~~e~~L~---pGD~LfIP~gWWH~V~s~~~ 357 (538)
...++|. ++-.||||+|+||...+++.
T Consensus 102 ~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd 131 (174)
T 3ejk_A 102 LAQVTLGRPDNYRLLRIPPQVWYGFAATGD 131 (174)
T ss_dssp EEEEEEETTTBCEEEEECTTCEEEEEECTT
T ss_pred EEEEEECCccCceEEEeCCCcEEEEEEccC
Confidence 3567787 67799999999999999765
No 50
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=89.77 E-value=0.47 Score=44.35 Aligned_cols=65 Identities=15% Similarity=0.363 Sum_probs=45.2
Q ss_pred ceeeeccC---CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEcCCCE
Q 009311 265 SSAHYDPH---HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILHAGDA 341 (538)
Q Consensus 265 T~lH~D~~---~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~pGD~ 341 (538)
++.|+.+. .-++.++.|+=.+.+-... | ......|+|||+
T Consensus 86 ~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~-----------g--------------------------~~~~~~l~~GD~ 128 (190)
T 1x82_A 86 TKGHFHAKLDRAEVYVALKGKGGMLLQTPE-----------G--------------------------DAKWISMEPGTV 128 (190)
T ss_dssp CCCBBCSSTTCCEEEEEEESCEEEEEECTT-----------C--------------------------CEEEEEECTTCE
T ss_pred CCCeECCCCCCCEEEEEEcCEEEEEEcCcC-----------C--------------------------cEEEEEECCCcE
Confidence 67887763 4678889998877763210 0 134679999999
Q ss_pred EecCCCCeEEEeeCC--ceEEEEEeeC
Q 009311 342 LFIPEGWFHQVDSDD--LTIAVNFWWR 366 (538)
Q Consensus 342 LfIP~gWWH~V~s~~--~sIaVN~w~~ 366 (538)
++||++++|...|.+ ....+.++..
T Consensus 129 v~ip~g~~H~~~N~g~~~~~~l~v~~~ 155 (190)
T 1x82_A 129 VYVPPYWAHRTVNIGDEPFIFLAIYPA 155 (190)
T ss_dssp EEECTTCEEEEEECSSSCEEEEEEEET
T ss_pred EEECCCCeEEEEECCcccEEEEEEECC
Confidence 999999999999943 3344444433
No 51
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=89.41 E-value=1.5 Score=35.95 Aligned_cols=63 Identities=19% Similarity=0.346 Sum_probs=44.5
Q ss_pred CCCCCceee--ecc-CCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEE
Q 009311 260 NAKSKSSAH--YDP-HHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVIL 336 (538)
Q Consensus 260 ~~gs~T~lH--~D~-~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L 336 (538)
..|..++.| ... ..-++.++.|+=.+.+ + .....|
T Consensus 29 ~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~---------------~---------------------------~~~~~l 66 (113)
T 2gu9_A 29 APGDREGGPDNRHRGADQWLFVVDGAGEAIV---------------D---------------------------GHTQAL 66 (113)
T ss_dssp CTTCEEECCCSSSCCCEEEEEEEECCEEEEE---------------T---------------------------TEEEEE
T ss_pred CCCCccCCcccccCCCcEEEEEEeCEEEEEE---------------C---------------------------CEEEEe
Confidence 335666777 655 4568888999877654 0 024689
Q ss_pred cCCCEEecCCCCeEEEeeCC--ceEEEEEe
Q 009311 337 HAGDALFIPEGWFHQVDSDD--LTIAVNFW 364 (538)
Q Consensus 337 ~pGD~LfIP~gWWH~V~s~~--~sIaVN~w 364 (538)
+|||+++||++-+|...+.+ ....+.+.
T Consensus 67 ~~Gd~~~i~~~~~H~~~~~~~~~~~~~~v~ 96 (113)
T 2gu9_A 67 QAGSLIAIERGQAHEIRNTGDTPLKTVNFY 96 (113)
T ss_dssp CTTEEEEECTTCCEEEECCSSSCEEEEEEE
T ss_pred CCCCEEEECCCCcEEeEcCCCCCEEEEEEE
Confidence 99999999999999999853 33444443
No 52
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=89.12 E-value=1.8 Score=38.66 Aligned_cols=64 Identities=17% Similarity=0.293 Sum_probs=47.2
Q ss_pred CCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEcCC
Q 009311 260 NAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILHAG 339 (538)
Q Consensus 260 ~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~pG 339 (538)
..|..++.|+....-++.++.|+=.+.+-.+... |. . ...+..|++|
T Consensus 49 ~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~~~~---------------------------~~---~---~~~~~~l~~G 95 (163)
T 1lr5_A 49 SPGQRTPIHRHSCEEVFTVLKGKGTLLMGSSSLK---------------------------YP---G---QPQEIPFFQN 95 (163)
T ss_dssp CTTCBCCEEEESSCEEEEEEECCEEEEECCSSSS---------------------------SC---C---SCEEEEECTT
T ss_pred CCCCcCCCeECCCCeEEEEEeCEEEEEECCcccc---------------------------cc---C---ccEEEEeCCC
Confidence 3466778898877779999999988877432100 00 0 1246899999
Q ss_pred CEEecCCCCeEEEeeCC
Q 009311 340 DALFIPEGWFHQVDSDD 356 (538)
Q Consensus 340 D~LfIP~gWWH~V~s~~ 356 (538)
|++|||++-.|++.|.+
T Consensus 96 d~i~ip~~~~H~~~n~~ 112 (163)
T 1lr5_A 96 TTFSIPVNDPHQVWNSD 112 (163)
T ss_dssp EEEEECTTCCEEEECCC
T ss_pred CEEEECCCCcEEeEeCC
Confidence 99999999999999854
No 53
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=89.09 E-value=2.2 Score=36.61 Aligned_cols=60 Identities=13% Similarity=0.244 Sum_probs=45.4
Q ss_pred eEEEEeCCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEE
Q 009311 254 INLWMNNAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQK 333 (538)
Q Consensus 254 ~~lWiG~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e 333 (538)
..+|--..|...+.|+ ..+-++.++.|+=++.+ + ..+
T Consensus 42 ~~~~~~~pG~~~~~H~-~~~E~~~Vl~G~~~~~~---~---------------------------------------g~~ 78 (119)
T 3lwc_A 42 IGYGRYAPGQSLTETM-AVDDVMIVLEGRLSVST---D---------------------------------------GET 78 (119)
T ss_dssp EEEEEECTTCEEEEEC-SSEEEEEEEEEEEEEEE---T---------------------------------------TEE
T ss_pred EEEEEECCCCCcCccC-CCCEEEEEEeCEEEEEE---C---------------------------------------CEE
Confidence 3445444577778887 56678899999887765 0 124
Q ss_pred EEEcCCCEEecCCCCeEEEeeCC
Q 009311 334 VILHAGDALFIPEGWFHQVDSDD 356 (538)
Q Consensus 334 ~~L~pGD~LfIP~gWWH~V~s~~ 356 (538)
.+|+|||++|||+|-.|...+.+
T Consensus 79 ~~l~~GD~v~ip~g~~H~~~~~~ 101 (119)
T 3lwc_A 79 VTAGPGEIVYMPKGETVTIRSHE 101 (119)
T ss_dssp EEECTTCEEEECTTCEEEEEEEE
T ss_pred EEECCCCEEEECCCCEEEEEcCC
Confidence 78999999999999999998863
No 54
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=89.07 E-value=1.2 Score=37.88 Aligned_cols=64 Identities=20% Similarity=0.379 Sum_probs=48.6
Q ss_pred CCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEcCCCE
Q 009311 262 KSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILHAGDA 341 (538)
Q Consensus 262 gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~pGD~ 341 (538)
|..++.|+....-++.++.|+-.+.+ + ..+..+++||+
T Consensus 44 g~~~~~H~H~~~Ei~~v~~G~~~~~i---------------~---------------------------~~~~~l~~Gd~ 81 (128)
T 4i4a_A 44 ETKSFRHSHNEYELFIVIQGNAIIRI---------------N---------------------------DEDFPVTKGDL 81 (128)
T ss_dssp TEECCCBCCSSEEEEEEEESEEEEEE---------------T---------------------------TEEEEEETTCE
T ss_pred CCccCCEecCCeEEEEEEeCEEEEEE---------------C---------------------------CEEEEECCCcE
Confidence 44677888766678888999877654 0 12578999999
Q ss_pred EecCCCCeEEEeeC--CceEEEEEeeCC
Q 009311 342 LFIPEGWFHQVDSD--DLTIAVNFWWRS 367 (538)
Q Consensus 342 LfIP~gWWH~V~s~--~~sIaVN~w~~~ 367 (538)
++||++=.|.+.+. +....+.++|..
T Consensus 82 ~~i~~~~~H~~~~~~~~~~~~~~i~f~~ 109 (128)
T 4i4a_A 82 IIIPLDSEHHVINNNQEDFHFYTIWWDK 109 (128)
T ss_dssp EEECTTCCEEEEECSSSCEEEEEEEECH
T ss_pred EEECCCCcEEeEeCCCCCEEEEEEEECH
Confidence 99999999999984 344667777765
No 55
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=88.92 E-value=2.7 Score=34.91 Aligned_cols=63 Identities=17% Similarity=0.212 Sum_probs=45.2
Q ss_pred EeCCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEc
Q 009311 258 MNNAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILH 337 (538)
Q Consensus 258 iG~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~ 337 (538)
+.+ |...+.|..+..-+..++.|+=.+.+ + .....|+
T Consensus 45 ~~~-g~~~~~H~h~~~e~~~vl~G~~~~~i---------------~---------------------------~~~~~l~ 81 (114)
T 2ozj_A 45 FAD-GESVSEEEYFGDTLYLILQGEAVITF---------------D---------------------------DQKIDLV 81 (114)
T ss_dssp EET-TSSCCCBCCSSCEEEEEEEEEEEEEE---------------T---------------------------TEEEEEC
T ss_pred ECC-CCccccEECCCCeEEEEEeCEEEEEE---------------C---------------------------CEEEEec
Confidence 444 55667787666668888888866544 0 1256899
Q ss_pred CCCEEecCCCCeEEEeeCCceEEEEE
Q 009311 338 AGDALFIPEGWFHQVDSDDLTIAVNF 363 (538)
Q Consensus 338 pGD~LfIP~gWWH~V~s~~~sIaVN~ 363 (538)
|||+++||++=.|.+.+.+.+..+..
T Consensus 82 ~Gd~i~i~~~~~H~~~~~~~~~~~~i 107 (114)
T 2ozj_A 82 PEDVLMVPAHKIHAIAGKGRFKMLQI 107 (114)
T ss_dssp TTCEEEECTTCCBEEEEEEEEEEEEE
T ss_pred CCCEEEECCCCcEEEEeCCCcEEEEE
Confidence 99999999999999998654444433
No 56
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=88.83 E-value=2 Score=35.91 Aligned_cols=59 Identities=14% Similarity=0.211 Sum_probs=43.9
Q ss_pred EeCCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEc
Q 009311 258 MNNAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILH 337 (538)
Q Consensus 258 iG~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~ 337 (538)
+.+ |..++.|+....-++.++.|+=++.+ . +. . ...|+
T Consensus 34 ~~p-g~~~~~H~H~~~e~~~Vl~G~~~~~i-~-------------~~--------------------------~-~~~l~ 71 (117)
T 2b8m_A 34 LPR-GEQMPKHYSNSYVHLIIIKGEMTLTL-E-------------DQ--------------------------E-PHNYK 71 (117)
T ss_dssp EET-TCBCCCEECSSCEEEEEEESEEEEEE-T-------------TS--------------------------C-CEEEE
T ss_pred ECC-CCcCCCEeCCCcEEEEEEeCEEEEEE-C-------------CE--------------------------E-EEEeC
Confidence 444 56677888777778889999987665 0 00 0 13899
Q ss_pred CCCEEecCCCCeEEEeeCCce
Q 009311 338 AGDALFIPEGWFHQVDSDDLT 358 (538)
Q Consensus 338 pGD~LfIP~gWWH~V~s~~~s 358 (538)
|||++|||++-.|...+.+..
T Consensus 72 ~Gd~i~ip~~~~H~~~~~~~~ 92 (117)
T 2b8m_A 72 EGNIVYVPFNVKMLIQNINSD 92 (117)
T ss_dssp TTCEEEECTTCEEEEECCSSS
T ss_pred CCCEEEECCCCcEEeEcCCCC
Confidence 999999999999999996544
No 57
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=88.58 E-value=2.2 Score=38.96 Aligned_cols=52 Identities=19% Similarity=0.236 Sum_probs=40.4
Q ss_pred CCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEcCCCE
Q 009311 262 KSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILHAGDA 341 (538)
Q Consensus 262 gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~pGD~ 341 (538)
|..++.|.....-++.++.|+=.+.+ + ..+..|+|||+
T Consensus 63 G~~~~~H~H~~~E~~~Vl~G~~~~~v---------------~---------------------------g~~~~l~~GD~ 100 (166)
T 3jzv_A 63 GGHSTLERHQHAHGVMILKGRGHAMV---------------G---------------------------RAVSAVAPYDL 100 (166)
T ss_dssp EEECCCBBCSSCEEEEEEEECEEEEE---------------T---------------------------TEEEEECTTCE
T ss_pred CCccCceeCCCcEEEEEEeCEEEEEE---------------C---------------------------CEEEEeCCCCE
Confidence 55667888777667788888866543 0 12579999999
Q ss_pred EecCCCCeEEEeeC
Q 009311 342 LFIPEGWFHQVDSD 355 (538)
Q Consensus 342 LfIP~gWWH~V~s~ 355 (538)
+|||++=+|++.|.
T Consensus 101 i~ip~g~~H~~~n~ 114 (166)
T 3jzv_A 101 VTIPGWSWHQFRAP 114 (166)
T ss_dssp EEECTTCCEEEECC
T ss_pred EEECCCCcEEeEeC
Confidence 99999999999984
No 58
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=88.27 E-value=1.5 Score=37.63 Aligned_cols=54 Identities=22% Similarity=0.291 Sum_probs=40.6
Q ss_pred CCCCceeeeccC-CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEcCC
Q 009311 261 AKSKSSAHYDPH-HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILHAG 339 (538)
Q Consensus 261 ~gs~T~lH~D~~-~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~pG 339 (538)
.+...+.|+... .-++.++.|+=++.+- + .....|+||
T Consensus 52 ~g~~~~~H~H~~~~E~~~vl~G~~~~~~~--------------~---------------------------~~~~~l~~G 90 (134)
T 2o8q_A 52 KEAKPTWHTHTVGFQLFYVLRGWVEFEYE--------------D---------------------------IGAVMLEAG 90 (134)
T ss_dssp ----CCCEEECCSCEEEEEEESEEEEEET--------------T---------------------------TEEEEEETT
T ss_pred CCCCCCCEECCCCcEEEEEEeCEEEEEEC--------------C---------------------------cEEEEecCC
Confidence 355678898876 7889999999876650 0 024689999
Q ss_pred CEEecCCCCeEEEeeC
Q 009311 340 DALFIPEGWFHQVDSD 355 (538)
Q Consensus 340 D~LfIP~gWWH~V~s~ 355 (538)
|+++||++-.|...+.
T Consensus 91 d~~~ip~g~~H~~~~~ 106 (134)
T 2o8q_A 91 GSAFQPPGVRHRELRH 106 (134)
T ss_dssp CEEECCTTCCEEEEEE
T ss_pred CEEEECCCCcEEeEeC
Confidence 9999999999999983
No 59
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=87.85 E-value=0.75 Score=47.33 Aligned_cols=58 Identities=16% Similarity=0.222 Sum_probs=42.8
Q ss_pred EeCCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEc
Q 009311 258 MNNAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILH 337 (538)
Q Consensus 258 iG~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~ 337 (538)
+.+ |..++.|.....-+..++.|+=.++.+. ..+..++
T Consensus 107 l~P-G~~~~~H~H~~~e~~yVl~G~g~~t~v~-----------------------------------------g~~~~l~ 144 (354)
T 2d40_A 107 IMP-GEVAPSHRHNQSALRFIVEGKGAFTAVD-----------------------------------------GERTPMN 144 (354)
T ss_dssp ECT-TCEEEEEEESSCEEEEEEECSSCEEEET-----------------------------------------TEEEECC
T ss_pred ECC-CCCcCCeecCcceEEEEEEEEEEEEEEC-----------------------------------------CEEEEEc
Confidence 444 6667788877777888888865542210 1257899
Q ss_pred CCCEEecCCCCeEEEeeCCc
Q 009311 338 AGDALFIPEGWFHQVDSDDL 357 (538)
Q Consensus 338 pGD~LfIP~gWWH~V~s~~~ 357 (538)
+||++|||++.||...|.+.
T Consensus 145 ~GD~~~iP~g~~H~~~n~~~ 164 (354)
T 2d40_A 145 EGDFILTPQWRWHDHGNPGD 164 (354)
T ss_dssp TTCEEEECTTSCEEEECCSS
T ss_pred CCCEEEECCCCcEEeEeCCC
Confidence 99999999999999999543
No 60
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=87.82 E-value=1.1 Score=38.81 Aligned_cols=55 Identities=20% Similarity=0.363 Sum_probs=41.3
Q ss_pred CCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEcCCCE
Q 009311 262 KSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILHAGDA 341 (538)
Q Consensus 262 gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~pGD~ 341 (538)
|..++.|+....-+..++.|+=.+.+.- + ..+..++|||+
T Consensus 49 g~~~~~H~H~~~e~~~vl~G~~~~~~~~-------------~---------------------------~~~~~l~~Gd~ 88 (145)
T 3ht1_A 49 NGSTPPHFHEWEHEIYVLEGSMGLVLPD-------------Q---------------------------GRTEEVGPGEA 88 (145)
T ss_dssp EEECCCEECSSCEEEEEEEECEEEEEGG-------------G---------------------------TEEEEECTTCE
T ss_pred CCcCCCccCCCceEEEEEEeEEEEEEeE-------------C---------------------------CEEEEECCCCE
Confidence 5567789887766677899987654200 0 12578999999
Q ss_pred EecCCCCeEEEeeCC
Q 009311 342 LFIPEGWFHQVDSDD 356 (538)
Q Consensus 342 LfIP~gWWH~V~s~~ 356 (538)
++||++-.|.+.+.+
T Consensus 89 ~~ip~~~~H~~~~~~ 103 (145)
T 3ht1_A 89 IFIPRGEPHGFVTGP 103 (145)
T ss_dssp EEECTTCCBEEECCT
T ss_pred EEECCCCeEEeEcCC
Confidence 999999999999953
No 61
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=87.53 E-value=1.7 Score=41.31 Aligned_cols=76 Identities=17% Similarity=0.306 Sum_probs=54.3
Q ss_pred CCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEcCC
Q 009311 260 NAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILHAG 339 (538)
Q Consensus 260 ~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~pG 339 (538)
..|..|+.|-....-++.++.|+=+-++|..... | + + ... .-+.++.||
T Consensus 87 ~PGq~spiHdH~~~~~~~VL~G~l~e~~y~~~~~---------g-----~------------~-l~~----~~~~~l~~G 135 (208)
T 2gm6_A 87 GPGQRTPIHDHTVWGLIGMLRGAEYSQPFVLDGS---------G-----R------------P-VLH----GEPTRLEPG 135 (208)
T ss_dssp CTTCBCCSBCCSSCEEEEEEESCEEEEEEEECTT---------S-----C------------E-EEC----SCCEEECTT
T ss_pred CCCcccCcccCCcceEEEEecccEEEEEeecCCC---------C-----c------------c-ccc----cceEEeCCC
Confidence 4489999998877777889999988877642210 0 0 0 011 125799999
Q ss_pred CEEecCC--CCeEEEeeC---CceEEEEEeeC
Q 009311 340 DALFIPE--GWFHQVDSD---DLTIAVNFWWR 366 (538)
Q Consensus 340 D~LfIP~--gWWH~V~s~---~~sIaVN~w~~ 366 (538)
|+.++++ |..|+|.|. +.+|++...-.
T Consensus 136 ~v~~~~~~~g~iH~V~N~~~~~~avsLHvY~~ 167 (208)
T 2gm6_A 136 HVEAVSPTVGDIHRVHNAYDDRVSISIHVYGA 167 (208)
T ss_dssp CEEEEBTTTBCCEEEEESCSSSCEEEEEEESS
T ss_pred CEEEECCCCCCeEEeccCCCCCcEEEEEEEcC
Confidence 9999999 999999984 35777776533
No 62
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=87.48 E-value=0.91 Score=47.61 Aligned_cols=74 Identities=20% Similarity=0.262 Sum_probs=55.1
Q ss_pred EEEeCCCCCceeeeccC-CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEE
Q 009311 256 LWMNNAKSKSSAHYDPH-HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKV 334 (538)
Q Consensus 256 lWiG~~gs~T~lH~D~~-~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~ 334 (538)
+=|.+ |+...+|+.+. +-|+.++.|+=++.++.|.... + .. . ...+..
T Consensus 244 v~l~p-G~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~---------~----------~~--------g---~~~~~~ 292 (397)
T 2phl_A 244 IEMEE-GALFVPHYYSKAIVILVVNEGEAHVELVGPKGNK---------E----------TL--------E---YESYRA 292 (397)
T ss_dssp EEECT-TEEEEEEEESSCEEEEEEEESEEEEEEEEECC-----------C----------CS--------C---EEEEEE
T ss_pred EEEcC-CcEeeeeEcCCCCEEEEEEeeeEEEEEEeccccc---------c----------CC--------C---ceEEEE
Confidence 34555 67889999986 6799999999999999874321 0 00 0 024678
Q ss_pred EEcCCCEEecCCCCeEEEeeCCceEEE
Q 009311 335 ILHAGDALFIPEGWFHQVDSDDLTIAV 361 (538)
Q Consensus 335 ~L~pGD~LfIP~gWWH~V~s~~~sIaV 361 (538)
.|++||+++||.|+.|...+.+ .+.+
T Consensus 293 ~l~~GDV~vvP~G~~h~~~n~~-~l~~ 318 (397)
T 2phl_A 293 ELSKDDVFVIPAAYPVAIKATS-NVNF 318 (397)
T ss_dssp EEETTCEEEECTTCCEEEEESS-SEEE
T ss_pred EecCCCEEEECCCCeEEEEeCC-CeEE
Confidence 9999999999999999999976 4443
No 63
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=87.46 E-value=0.74 Score=48.84 Aligned_cols=78 Identities=13% Similarity=0.186 Sum_probs=54.2
Q ss_pred EEEEeCCCCCceeeeccC-CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEE
Q 009311 255 NLWMNNAKSKSSAHYDPH-HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQK 333 (538)
Q Consensus 255 ~lWiG~~gs~T~lH~D~~-~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e 333 (538)
.+=+.+ |+...+|+.+. +-|+.++.|+=++.++.|.-... +. +... -..+ +.+.
T Consensus 270 ~v~l~p-G~m~~pH~hp~A~Ei~~V~~G~~~v~vv~~~g~~~-------------~~---~~~~------~~~~--r~~~ 324 (434)
T 2ea7_A 270 SVDMKE-GALLLPHYSSKAIVIMVINEGEAKIELVGLSDQQQ-------------QK---QQEE------SLEV--QRYR 324 (434)
T ss_dssp EEEECT-TEEEEEEEESSCEEEEEEEESCEEEEEEEEEECCC-------------CT---TSCC------CEEE--EEEE
T ss_pred EEEEcC-CeeeccEEcCCCCEEEEEEeeEEEEEEEecCcccc-------------cc---cccc------Ccce--EEEE
Confidence 444666 67789999996 67999999999999997742100 00 0000 0000 1245
Q ss_pred EEEcCCCEEecCCCCeEEEeeCCc
Q 009311 334 VILHAGDALFIPEGWFHQVDSDDL 357 (538)
Q Consensus 334 ~~L~pGD~LfIP~gWWH~V~s~~~ 357 (538)
..|++||+++||.|+.|...+.+.
T Consensus 325 ~~l~~Gdv~vvP~g~~h~~~n~~~ 348 (434)
T 2ea7_A 325 AELSEDDVFVIPAAYPVAINATSN 348 (434)
T ss_dssp EEECTTCEEEECTTCCEEEEESSS
T ss_pred EEecCCcEEEECCCCeEEEEcCCC
Confidence 699999999999999999999753
No 64
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=87.32 E-value=0.83 Score=48.15 Aligned_cols=82 Identities=13% Similarity=0.171 Sum_probs=54.5
Q ss_pred EEEEeCCCCCceeeeccC-CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEE
Q 009311 255 NLWMNNAKSKSSAHYDPH-HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQK 333 (538)
Q Consensus 255 ~lWiG~~gs~T~lH~D~~-~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e 333 (538)
.+-+.+ |+...+||.+. +-|+.++.|+=++.++.|.-... + +. ++ + .- ..+ ..+.
T Consensus 253 ~~~l~~-g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~g~~~-------~-----~~---~~-~--~~---~~~--~~~~ 308 (416)
T 1uij_A 253 SVDINE-GALLLPHFNSKAIVILVINEGDANIELVGIKEQQQ-------K-----QK---QE-E--EP---LEV--QRYR 308 (416)
T ss_dssp EEEECT-TEEEEEEEESSCEEEEEEEESEEEEEEEEEC---------------------------------CCE--EEEE
T ss_pred EEEEcC-CcEecceEcCCCcEEEEEEeeEEEEEEEcCCCccc-------c-----cc---cc-c--cc---cce--EEEE
Confidence 344555 67889999986 67999999999999998752100 0 00 00 0 00 000 1245
Q ss_pred EEEcCCCEEecCCCCeEEEeeCCceEEE
Q 009311 334 VILHAGDALFIPEGWFHQVDSDDLTIAV 361 (538)
Q Consensus 334 ~~L~pGD~LfIP~gWWH~V~s~~~sIaV 361 (538)
..|++||+++||.|+.|...+.+ .+.+
T Consensus 309 ~~l~~Gdv~vvP~g~~h~~~n~~-~~~~ 335 (416)
T 1uij_A 309 AELSEDDVFVIPAAYPFVVNATS-NLNF 335 (416)
T ss_dssp EEEETTCEEEECTTCCEEEEESS-SEEE
T ss_pred EEecCCcEEEECCCCeEEEEcCC-CeEE
Confidence 69999999999999999999974 4443
No 65
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=87.02 E-value=0.6 Score=39.21 Aligned_cols=25 Identities=20% Similarity=0.318 Sum_probs=22.0
Q ss_pred EEEEcCCCEEecCCCCeEEEeeCCc
Q 009311 333 KVILHAGDALFIPEGWFHQVDSDDL 357 (538)
Q Consensus 333 e~~L~pGD~LfIP~gWWH~V~s~~~ 357 (538)
...|+|||+++||++..|...+.+.
T Consensus 69 ~~~l~~GD~i~ip~g~~H~~~n~~~ 93 (101)
T 1o5u_A 69 KYVIEKGDLVTFPKGLRCRWKVLEP 93 (101)
T ss_dssp EEEEETTCEEEECTTCEEEEEEEEE
T ss_pred EEEECCCCEEEECCCCcEEEEeCCC
Confidence 4689999999999999999998543
No 66
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=86.98 E-value=0.37 Score=40.15 Aligned_cols=23 Identities=22% Similarity=0.268 Sum_probs=20.7
Q ss_pred EEEEcCCCEEecCCCCeEEEeeC
Q 009311 333 KVILHAGDALFIPEGWFHQVDSD 355 (538)
Q Consensus 333 e~~L~pGD~LfIP~gWWH~V~s~ 355 (538)
+..+.+||.+|||.|-||++.|.
T Consensus 60 ~~~l~~G~~~~ip~G~~H~~~N~ 82 (98)
T 3lag_A 60 LAQLKTGRSYARKAGVQHDVRNE 82 (98)
T ss_dssp CCCBCTTCCEEECTTCEEEEBCC
T ss_pred EEEecCCcEEEEcCCCcEECEEC
Confidence 45789999999999999999994
No 67
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=86.94 E-value=5.2 Score=33.75 Aligned_cols=65 Identities=18% Similarity=0.198 Sum_probs=45.4
Q ss_pred CCCCce-eeeccCCc-eeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEcC
Q 009311 261 AKSKSS-AHYDPHHN-LLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILHA 338 (538)
Q Consensus 261 ~gs~T~-lH~D~~~N-~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~p 338 (538)
.+...+ .|+....- ++.++.|+=.+.+ + .....|+|
T Consensus 35 pg~~~~~~H~H~~~e~~~~vl~G~~~~~i---------------~---------------------------~~~~~l~~ 72 (125)
T 3cew_A 35 AGAGVPFVHSHKQNEEIYGILSGKGFITI---------------D---------------------------GEKIELQA 72 (125)
T ss_dssp TTCBCSSEEEESSEEEEEEEEEEEEEEEE---------------T---------------------------TEEEEEET
T ss_pred CCCCCCCCccCCCceEEEEEEeCEEEEEE---------------C---------------------------CEEEEeCC
Confidence 355555 78876543 4559999877654 0 02468999
Q ss_pred CCEEecCCCCeEEEeeCC--ceEEEEEeeCC
Q 009311 339 GDALFIPEGWFHQVDSDD--LTIAVNFWWRS 367 (538)
Q Consensus 339 GD~LfIP~gWWH~V~s~~--~sIaVN~w~~~ 367 (538)
||+++||++-.|...+.+ ....+.+.+..
T Consensus 73 Gd~i~i~~~~~H~~~~~~~~~~~~~~i~~~~ 103 (125)
T 3cew_A 73 GDWLRIAPDGKRQISAASDSPIGFLCIQVKA 103 (125)
T ss_dssp TEEEEECTTCCEEEEEBTTBCEEEEEEEEET
T ss_pred CCEEEECCCCcEEEEcCCCCCEEEEEEEcCC
Confidence 999999999999999853 34455555554
No 68
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=86.85 E-value=0.98 Score=39.95 Aligned_cols=74 Identities=15% Similarity=0.185 Sum_probs=49.8
Q ss_pred EEeCCCCCceeeeccC-CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEE
Q 009311 257 WMNNAKSKSSAHYDPH-HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVI 335 (538)
Q Consensus 257 WiG~~gs~T~lH~D~~-~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~ 335 (538)
.+.+ |...+.|+.+. +-++.++.|+=.+.+-. ... . ...+..
T Consensus 49 ~l~p-g~~~~~H~H~~~~E~~~Vl~G~~~~~i~~--------------~~~-------------------~---~~~~~~ 91 (148)
T 2oa2_A 49 SIQV-GEDIGLEIHPHLDQFLRVEEGRGLVQMGH--------------RQD-------------------N---LHFQEE 91 (148)
T ss_dssp EECT-TCBCCCBCCTTCEEEEEEEESEEEEEEES--------------BTT-------------------B---CCEEEE
T ss_pred EECC-CCccCceECCCCcEEEEEEeCEEEEEECC--------------ccc-------------------c---ceeeEE
Confidence 3444 56677888764 47888999998877621 000 0 024679
Q ss_pred EcCCCEEecCCCCeEEEeeCC--ceEEEEEeeCC
Q 009311 336 LHAGDALFIPEGWFHQVDSDD--LTIAVNFWWRS 367 (538)
Q Consensus 336 L~pGD~LfIP~gWWH~V~s~~--~sIaVN~w~~~ 367 (538)
|+|||+++||++-+|.+.|.+ ....+.+++..
T Consensus 92 l~~Gd~i~ip~g~~H~~~n~~~~~~~~l~i~~~~ 125 (148)
T 2oa2_A 92 VFDDYAILIPAGTWHNVRNTGNRPLKLYSIYAPP 125 (148)
T ss_dssp EETTCEEEECTTCEEEEEECSSSCEEEEEEEESC
T ss_pred ECCCCEEEECCCCcEEEEECCCCCEEEEEEECCC
Confidence 999999999999999999843 33444444443
No 69
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=86.57 E-value=1.2 Score=46.93 Aligned_cols=63 Identities=21% Similarity=0.198 Sum_probs=48.3
Q ss_pred eEEEEeCCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEE
Q 009311 254 INLWMNNAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQK 333 (538)
Q Consensus 254 ~~lWiG~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e 333 (538)
..+-+.+ |...+.|+-..+=++.++.|+=++.++.|.. ..+
T Consensus 52 ~~~~l~P-Gg~~~pHh~~a~E~~yVl~G~g~v~~v~~~~--------------------------------------~~~ 92 (416)
T 1uij_A 52 VQFQSKP-NTILLPHHADADFLLFVLSGRAILTLVNNDD--------------------------------------RDS 92 (416)
T ss_dssp EEEEECT-TEEEEEEEESEEEEEEEEESCEEEEEECSSC--------------------------------------EEE
T ss_pred EEEEecc-CcCcccccCCCceEEEEEeeEEEEEEEECCC--------------------------------------CeE
Confidence 4556777 5577888433456899999999988876521 124
Q ss_pred EEEcCCCEEecCCCCeEEEeeC
Q 009311 334 VILHAGDALFIPEGWFHQVDSD 355 (538)
Q Consensus 334 ~~L~pGD~LfIP~gWWH~V~s~ 355 (538)
..+++||++|||+|..|.+.|.
T Consensus 93 ~~l~~GDv~~iP~G~~H~~~N~ 114 (416)
T 1uij_A 93 YNLHPGDAQRIPAGTTYYLVNP 114 (416)
T ss_dssp EEECTTEEEEECTTCEEEEEEC
T ss_pred EEecCCCEEEECCCCeEEEEec
Confidence 6899999999999999999996
No 70
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=86.54 E-value=0.62 Score=38.08 Aligned_cols=24 Identities=29% Similarity=0.263 Sum_probs=22.0
Q ss_pred EEEEcCCCEEecCCCCeEEEeeCC
Q 009311 333 KVILHAGDALFIPEGWFHQVDSDD 356 (538)
Q Consensus 333 e~~L~pGD~LfIP~gWWH~V~s~~ 356 (538)
+.+|+|||++|+|++-.|.+.|.+
T Consensus 60 ~~~l~~Gd~~~~p~~~~H~~~N~g 83 (97)
T 2fqp_A 60 TSQLTRGVSYTRPEGVEHNVINPS 83 (97)
T ss_dssp EEEECTTCCEEECTTCEEEEECCS
T ss_pred EEEEcCCCEEEeCCCCcccCEeCC
Confidence 579999999999999999999954
No 71
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=86.43 E-value=3 Score=37.14 Aligned_cols=58 Identities=14% Similarity=0.252 Sum_probs=43.1
Q ss_pred EeCCCCCceeeec-cCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEE
Q 009311 258 MNNAKSKSSAHYD-PHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVIL 336 (538)
Q Consensus 258 iG~~gs~T~lH~D-~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L 336 (538)
+.+++...+.|+. ...-++.++.|+=.+.+ + ..+..|
T Consensus 53 l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~---------------~---------------------------~~~~~l 90 (162)
T 3l2h_A 53 IEPGKESTEYHLHHYEEEAVYVLSGKGTLTM---------------E---------------------------NDQYPI 90 (162)
T ss_dssp ECTTCBSSSSBEESSCCEEEEEEESCEEEEE---------------T---------------------------TEEEEE
T ss_pred ECCCCcCCCCccCCCCCEEEEEEEEEEEEEE---------------C---------------------------CEEEEe
Confidence 5553335788987 45778889999877643 0 125789
Q ss_pred cCCCEEecCCC-CeEEEeeCCc
Q 009311 337 HAGDALFIPEG-WFHQVDSDDL 357 (538)
Q Consensus 337 ~pGD~LfIP~g-WWH~V~s~~~ 357 (538)
+|||++|||++ -.|.+.|.+.
T Consensus 91 ~~Gd~i~i~~~~~~H~~~n~~~ 112 (162)
T 3l2h_A 91 APGDFVGFPCHAAAHSISNDGT 112 (162)
T ss_dssp CTTCEEEECTTSCCEEEECCSS
T ss_pred CCCCEEEECCCCceEEeEeCCC
Confidence 99999999998 9999999543
No 72
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=86.10 E-value=1.5 Score=45.08 Aligned_cols=69 Identities=16% Similarity=0.341 Sum_probs=48.7
Q ss_pred CCCCCceeeeccC-CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEcC
Q 009311 260 NAKSKSSAHYDPH-HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILHA 338 (538)
Q Consensus 260 ~~gs~T~lH~D~~-~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~p 338 (538)
..|..++.|+.+. .-++.++.|+=++++..++ | + ..+..|++
T Consensus 265 ~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~-----------g---------------------~-----~~~~~l~~ 307 (385)
T 1j58_A 265 EPGAMRELHWHPNTHEWQYYISGKARMTVFASD-----------G---------------------H-----ARTFNYQA 307 (385)
T ss_dssp CTTCEEEEEECSSSCEEEEEEESEEEEEEEEET-----------T---------------------E-----EEEEEEES
T ss_pred CCCcccCceeCCCCCEEEEEEeCeEEEEEEcCC-----------C---------------------c-----EEEEEEcC
Confidence 3356667788777 6788899998888775211 0 0 13579999
Q ss_pred CCEEecCCCCeEEEeeCC--ceEEEEEee
Q 009311 339 GDALFIPEGWFHQVDSDD--LTIAVNFWW 365 (538)
Q Consensus 339 GD~LfIP~gWWH~V~s~~--~sIaVN~w~ 365 (538)
||++|||++.+|.+.|.+ ....+.+..
T Consensus 308 GD~~~ip~~~~H~~~n~~~~~~~~l~v~~ 336 (385)
T 1j58_A 308 GDVGYVPFAMGHYVENIGDEPLVFLEIFK 336 (385)
T ss_dssp SCEEEECTTCBEEEEECSSSCEEEEEEES
T ss_pred CCEEEECCCCeEEEEECCCCCEEEEEEEC
Confidence 999999999999999843 334444443
No 73
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=86.03 E-value=1.5 Score=46.73 Aligned_cols=74 Identities=19% Similarity=0.227 Sum_probs=52.4
Q ss_pred EEEeCCCCCceeeeccC-CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEE
Q 009311 256 LWMNNAKSKSSAHYDPH-HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKV 334 (538)
Q Consensus 256 lWiG~~gs~T~lH~D~~-~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~ 334 (538)
+=|.+ |+..++|+.+. +-|..++.|+=++.++.|.-.. .+ .+ . .+. .+.+..
T Consensus 286 v~l~p-g~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~~~~-------------~~----~~-~-------g~~-~~~~~~ 338 (445)
T 2cav_A 286 LQMNE-GALFVPHYNSRATVILVANEGRAEVELVGLEQQQ-------------QQ----GL-E-------SMQ-LRRYAA 338 (445)
T ss_dssp EEECT-TEEEEEEEESSCEEEEEEEESCEEEEEEEC------------------------------------C-CEEEEE
T ss_pred EEeeC-CceeeeEECCCCcEEEEEEeeEEEEEEEeCCCcc-------------cc----cc-c-------Ccc-eEEEEe
Confidence 44555 67889999987 6799999999999999875210 00 00 0 000 013578
Q ss_pred EEcCCCEEecCCCCeEEEeeCC
Q 009311 335 ILHAGDALFIPEGWFHQVDSDD 356 (538)
Q Consensus 335 ~L~pGD~LfIP~gWWH~V~s~~ 356 (538)
+|++||+++||.|+.|...+.+
T Consensus 339 ~l~~GdV~vvP~g~~h~~~n~~ 360 (445)
T 2cav_A 339 TLSEGDIIVIPSSFPVALKAAS 360 (445)
T ss_dssp EECTTCEEEECTTCCEEEEESS
T ss_pred EecCCcEEEEcCCcEEEEEcCC
Confidence 9999999999999999999974
No 74
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=86.02 E-value=3.3 Score=39.43 Aligned_cols=72 Identities=14% Similarity=0.109 Sum_probs=56.5
Q ss_pred eEEEEeCCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEE
Q 009311 254 INLWMNNAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQK 333 (538)
Q Consensus 254 ~~lWiG~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e 333 (538)
+.+|-=.+|+..+.|.-+.+-+..++.|+=++++= + .+
T Consensus 39 ~~~~~~~~G~~~~~h~h~~~~~~~Vl~G~~~~~i~--------------~----------------------------~~ 76 (227)
T 3rns_A 39 ISLFSLAKDEEITAEAMLGNRYYYCFNGNGEIFIE--------------N----------------------------NK 76 (227)
T ss_dssp EEEEEECTTCEEEECSCSSCEEEEEEESEEEEEES--------------S----------------------------CE
T ss_pred EEEEEECCCCccCccccCCCEEEEEEeCEEEEEEC--------------C----------------------------EE
Confidence 33443344788889988888899999999887650 0 14
Q ss_pred EEEcCCCEEecCCCCeEEEeeCCceEEEEEeeCC
Q 009311 334 VILHAGDALFIPEGWFHQVDSDDLTIAVNFWWRS 367 (538)
Q Consensus 334 ~~L~pGD~LfIP~gWWH~V~s~~~sIaVN~w~~~ 367 (538)
.+|+|||.+|||++-.|.+.+.+.+..+-++.+.
T Consensus 77 ~~l~~Gd~~~~p~~~~H~~~a~~~~~~l~i~~~~ 110 (227)
T 3rns_A 77 KTISNGDFLEITANHNYSIEARDNLKLIEIGEKI 110 (227)
T ss_dssp EEEETTEEEEECSSCCEEEEESSSEEEEEEEECC
T ss_pred EEECCCCEEEECCCCCEEEEECCCcEEEEEEeec
Confidence 6899999999999999999998888877776664
No 75
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=85.65 E-value=0.84 Score=41.45 Aligned_cols=33 Identities=27% Similarity=0.381 Sum_probs=25.9
Q ss_pred EEEEcCCCEEecCCCCeEEEeeCCceEEEEEee
Q 009311 333 KVILHAGDALFIPEGWFHQVDSDDLTIAVNFWW 365 (538)
Q Consensus 333 e~~L~pGD~LfIP~gWWH~V~s~~~sIaVN~w~ 365 (538)
..+|+|||++|||+|..|...+.+.+..+...+
T Consensus 103 ~~~l~~GD~i~iP~G~~h~~~n~~~a~~l~V~~ 135 (151)
T 4axo_A 103 KVSASSGELIFIPKGSKIQFSVPDYARFIYVTY 135 (151)
T ss_dssp EEEEETTCEEEECTTCEEEEEEEEEEEEEEEEE
T ss_pred EEEEcCCCEEEECCCCEEEEEeCCCEEEEEEEC
Confidence 579999999999999999999875444444433
No 76
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=85.22 E-value=1.2 Score=47.21 Aligned_cols=63 Identities=22% Similarity=0.250 Sum_probs=47.5
Q ss_pred EEEEeCCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEE
Q 009311 255 NLWMNNAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKV 334 (538)
Q Consensus 255 ~lWiG~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~ 334 (538)
.+=|.+ |...++|+-..+-|+.++.|+=++.++.|.. ..+.
T Consensus 65 ~~~l~P-Gg~~~pHh~~a~Ei~yVl~G~g~v~~v~~~~--------------------------------------~~~~ 105 (434)
T 2ea7_A 65 EFKSKP-NTLLLPHHADADFLLVVLNGTAVLTLVNPDS--------------------------------------RDSY 105 (434)
T ss_dssp EEEECT-TEEEEEEEESEEEEEEEEESEEEEEEECSSC--------------------------------------EEEE
T ss_pred EEEecC-CcCccCccCCCceEEEEEecEEEEEEEeCCC--------------------------------------CEEE
Confidence 344666 6677888433456899999999888875421 1246
Q ss_pred EEcCCCEEecCCCCeEEEeeCC
Q 009311 335 ILHAGDALFIPEGWFHQVDSDD 356 (538)
Q Consensus 335 ~L~pGD~LfIP~gWWH~V~s~~ 356 (538)
.|++||++|||+|..|.+.|.+
T Consensus 106 ~l~~GDv~~iP~G~~H~~~N~g 127 (434)
T 2ea7_A 106 ILEQGHAQKIPAGTTFFLVNPD 127 (434)
T ss_dssp EEETTEEEEECTTCEEEEEECC
T ss_pred EeCCCCEEEECCCccEEEEeCC
Confidence 8999999999999999999964
No 77
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=84.90 E-value=0.63 Score=37.66 Aligned_cols=26 Identities=27% Similarity=0.465 Sum_probs=22.4
Q ss_pred EEEEcCCCEEecCCCCeEEEeeCCce
Q 009311 333 KVILHAGDALFIPEGWFHQVDSDDLT 358 (538)
Q Consensus 333 e~~L~pGD~LfIP~gWWH~V~s~~~s 358 (538)
...|++||+++||++-.|.+.+.+.+
T Consensus 69 ~~~l~~Gd~~~ip~~~~H~~~~~~~~ 94 (102)
T 3d82_A 69 NITLQAGEMYVIPKGVEHKPMAKEEC 94 (102)
T ss_dssp EEEEETTEEEEECTTCCBEEEEEEEE
T ss_pred EEEEcCCCEEEECCCCeEeeEcCCCC
Confidence 46899999999999999999986433
No 78
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=84.82 E-value=3.2 Score=37.42 Aligned_cols=58 Identities=19% Similarity=0.237 Sum_probs=43.6
Q ss_pred EeCCCCCceeeeccC-CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEE
Q 009311 258 MNNAKSKSSAHYDPH-HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVIL 336 (538)
Q Consensus 258 iG~~gs~T~lH~D~~-~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L 336 (538)
+.+++..++.|+... +-++.++.|+=.+.+ + ..+..|
T Consensus 50 l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~---------------~---------------------------~~~~~l 87 (163)
T 3i7d_A 50 LEPGAKSSLRHYHMEQDEFVMVTEGALVLVD---------------D---------------------------QGEHPM 87 (163)
T ss_dssp ECTTCBSSSSEEESSCCEEEEEEESCEEEEE---------------T---------------------------TEEEEE
T ss_pred ECCCCcCCCCccCCCCcEEEEEEECEEEEEE---------------C---------------------------CEEEEe
Confidence 555443457898776 578899999877544 0 125799
Q ss_pred cCCCEEecCCC--CeEEEeeCCc
Q 009311 337 HAGDALFIPEG--WFHQVDSDDL 357 (538)
Q Consensus 337 ~pGD~LfIP~g--WWH~V~s~~~ 357 (538)
++||++|||++ -.|++.|.+.
T Consensus 88 ~~GD~i~ip~~~~~~H~~~n~~~ 110 (163)
T 3i7d_A 88 VPGDCAAFPAGDPNGHQFVNRTD 110 (163)
T ss_dssp CTTCEEEECTTCCCCBEEECCSS
T ss_pred CCCCEEEECCCCCcceEEEECCC
Confidence 99999999999 9999999543
No 79
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=84.66 E-value=1 Score=38.08 Aligned_cols=32 Identities=25% Similarity=0.345 Sum_probs=25.1
Q ss_pred EEEcCCCEEecCCCCeEEEeeCC---ceEEEEEee
Q 009311 334 VILHAGDALFIPEGWFHQVDSDD---LTIAVNFWW 365 (538)
Q Consensus 334 ~~L~pGD~LfIP~gWWH~V~s~~---~sIaVN~w~ 365 (538)
..|+|||++|||++=-|.+.|.+ .++-+-++|
T Consensus 75 ~~l~~Gd~i~ipa~~~H~~~n~~~~~~~~~l~v~~ 109 (112)
T 2opk_A 75 RVMRPGDWLHVPAHCRHRVAWTDGGEPTVWLAVHC 109 (112)
T ss_dssp EEECTTEEEEECTTCCEEEEEECSSSCEEEEEEEE
T ss_pred EEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEE
Confidence 58999999999999999999943 354444444
No 80
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=84.58 E-value=3.8 Score=40.74 Aligned_cols=58 Identities=21% Similarity=0.295 Sum_probs=45.3
Q ss_pred eCCCCCceeeecc-CCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEc
Q 009311 259 NNAKSKSSAHYDP-HHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILH 337 (538)
Q Consensus 259 G~~gs~T~lH~D~-~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~ 337 (538)
...|...+.|... .+-+..++.|+=++++ . + ....|+
T Consensus 53 ~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~-~-------------~----------------------------~~~~l~ 90 (337)
T 1y3t_A 53 GGKGDAFPLHVHKDTHEGILVLDGKLELTL-D-------------G----------------------------ERYLLI 90 (337)
T ss_dssp ECTTCEEEEEECTTCCEEEEEEESCEEEEE-T-------------T----------------------------EEEEEC
T ss_pred eCCCCCCCceeCCCceEEEEEEECEEEEEE-C-------------C----------------------------EEEEEC
Confidence 3446777889887 6778999999877665 0 0 246899
Q ss_pred CCCEEecCCCCeEEEeeCCce
Q 009311 338 AGDALFIPEGWFHQVDSDDLT 358 (538)
Q Consensus 338 pGD~LfIP~gWWH~V~s~~~s 358 (538)
+||++|||++-+|...|.+..
T Consensus 91 ~Gd~~~~p~~~~H~~~n~~~~ 111 (337)
T 1y3t_A 91 SGDYANIPAGTPHSYRMQSHR 111 (337)
T ss_dssp TTCEEEECTTCCEEEEECSTT
T ss_pred CCCEEEECCCCcEEEEECCCC
Confidence 999999999999999996543
No 81
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=84.20 E-value=9.5 Score=35.58 Aligned_cols=84 Identities=20% Similarity=0.129 Sum_probs=54.0
Q ss_pred ceEEEEeCCCCCceeeec--cC-CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCC
Q 009311 253 AINLWMNNAKSKSSAHYD--PH-HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGE 329 (538)
Q Consensus 253 ~~~lWiG~~gs~T~lH~D--~~-~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~ 329 (538)
..|.=.+..|+.-.+|+. .. .=+..+++|+=.-+++.-.. + | |.|.+
T Consensus 49 Q~n~S~s~~GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~----------~-----S------------pTfg~--- 98 (185)
T 1ep0_A 49 QDNESMSVRGVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRK----------N-----S------------DTYGE--- 98 (185)
T ss_dssp EEEEEEEETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECCT----------T-----C------------TTTTC---
T ss_pred EEEEEeCcCCeEecceecCCccccEEEEEeCCeEEEEEEECCC----------C-----C------------CCCCe---
Confidence 355556667888899998 33 44778889985444443210 0 0 12211
Q ss_pred ccEEEEEcC--CCEEecCCCCeEEEeeCCceEEEEEeeCC
Q 009311 330 YSQKVILHA--GDALFIPEGWFHQVDSDDLTIAVNFWWRS 367 (538)
Q Consensus 330 ~~~e~~L~p--GD~LfIP~gWWH~V~s~~~sIaVN~w~~~ 367 (538)
...++|.+ +..||||+|+||...+++.+.-+.|+-..
T Consensus 99 -~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y~~s~ 137 (185)
T 1ep0_A 99 -WTGVRLSDENRREFFIPEGFAHGFLALSDECIVNYKCTE 137 (185)
T ss_dssp -EEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEEESS
T ss_pred -EEEEEecCCCCCEEEeCCCeEEEEEEcCCCeEEEEecCC
Confidence 24567765 68999999999999998877445554443
No 82
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=84.13 E-value=2.9 Score=40.23 Aligned_cols=70 Identities=10% Similarity=0.059 Sum_probs=49.8
Q ss_pred eEEEEeCCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEE
Q 009311 254 INLWMNNAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQK 333 (538)
Q Consensus 254 ~~lWiG~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e 333 (538)
+.+|.=+.|+..+.|..+..-+..++.|+=.+.+ . ...
T Consensus 36 ~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~~-~-----------------------------------------~~~ 73 (243)
T 3h7j_A 36 VLMSYVPPHTNVEPHQHKEVQIGMVVSGELMMTV-G-----------------------------------------DVT 73 (243)
T ss_dssp EEEEEECTTEEEEEECCSSEEEEEEEESEEEEEE-T-----------------------------------------TEE
T ss_pred EEEEEECCCCccCCEECCCcEEEEEEEeEEEEEE-C-----------------------------------------CEE
Confidence 3344444577788898877778888899877654 0 124
Q ss_pred EEEcCCCEEe-cCCCCeEEEeeCCceEEEEEee
Q 009311 334 VILHAGDALF-IPEGWFHQVDSDDLTIAVNFWW 365 (538)
Q Consensus 334 ~~L~pGD~Lf-IP~gWWH~V~s~~~sIaVN~w~ 365 (538)
.+|+|||++| ||++-+|.+.|.+..-++-++.
T Consensus 74 ~~l~~Gd~i~~ip~~~~H~~~n~~~~~~~~l~i 106 (243)
T 3h7j_A 74 RKMTALESAYIAPPHVPHGARNDTDQEVIAIDI 106 (243)
T ss_dssp EEEETTTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred EEECCCCEEEEcCCCCcEeeEeCCCCcEEEEEE
Confidence 7999999997 9999999999955433333443
No 83
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=83.95 E-value=9.1 Score=35.68 Aligned_cols=84 Identities=17% Similarity=0.030 Sum_probs=53.5
Q ss_pred ceEEEEeCCCCCceeeec--c-CCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCC
Q 009311 253 AINLWMNNAKSKSSAHYD--P-HHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGE 329 (538)
Q Consensus 253 ~~~lWiG~~gs~T~lH~D--~-~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~ 329 (538)
..|.-.+..|+.-.+|+. . ..=+..+++|+=.-+++.- .+. | |.|.+
T Consensus 50 Q~n~S~s~~GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~------R~~---------S------------pTfg~--- 99 (184)
T 2ixk_A 50 QDNHSRSARGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDL------RRG---------S------------PTFGQ--- 99 (184)
T ss_dssp EEEEEEEETTBEEEEEEESSSCCCEEEEEEESEEEEEEEEC------BTT---------S------------TTTTC---
T ss_pred EEEEEeCCCCceeeEEeCCCCCcCEEEEEeCCeEEEEEEEC------CCC---------C------------CCCCe---
Confidence 355555667888999998 2 2446788899854444431 110 0 11221
Q ss_pred ccEEEEEcC--CCEEecCCCCeEEEeeCCceEEEEEeeCC
Q 009311 330 YSQKVILHA--GDALFIPEGWFHQVDSDDLTIAVNFWWRS 367 (538)
Q Consensus 330 ~~~e~~L~p--GD~LfIP~gWWH~V~s~~~sIaVN~w~~~ 367 (538)
...++|.+ +..||||+|+||...+++...-+.|+-..
T Consensus 100 -~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y~~s~ 138 (184)
T 2ixk_A 100 -WVGERLSAENKRQMWIPAGFAHGFVVLSEYAEFLYKTTD 138 (184)
T ss_dssp -EEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEEESS
T ss_pred -EEEEEeCCCcCCEEEeCCCeEEEEEEcCCCEEEEEeCCC
Confidence 24566765 68999999999999998877445554443
No 84
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=83.79 E-value=0.84 Score=38.74 Aligned_cols=57 Identities=18% Similarity=0.245 Sum_probs=41.8
Q ss_pred EeCCCCCceeeeccC-CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEE
Q 009311 258 MNNAKSKSSAHYDPH-HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVIL 336 (538)
Q Consensus 258 iG~~gs~T~lH~D~~-~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L 336 (538)
+.+ |...+.|+.+. .-++.++.|+=.+++- + ..+..|
T Consensus 46 ~~p-g~~~~~H~H~~~~e~~~Vl~G~~~~~~~--------------~---------------------------~~~~~l 83 (125)
T 3h8u_A 46 AHP-GQEIASHVHPHGQDTWTVISGEAEYHQG--------------N---------------------------GIVTHL 83 (125)
T ss_dssp ECT-TCEECCC-CTTCEEEEEEEECEEEEECS--------------T---------------------------TCEEEE
T ss_pred ECC-CCcCCcccCCCCeEEEEEEEeEEEEEEC--------------C---------------------------CeEEEe
Confidence 444 67788998875 5577799998665320 0 025789
Q ss_pred cCCCEEecCCCCeEEEeeCC
Q 009311 337 HAGDALFIPEGWFHQVDSDD 356 (538)
Q Consensus 337 ~pGD~LfIP~gWWH~V~s~~ 356 (538)
++||+++||++-+|.+.|.+
T Consensus 84 ~~Gd~~~i~~~~~H~~~n~~ 103 (125)
T 3h8u_A 84 KAGDIAIAKPGQVHGAMNSG 103 (125)
T ss_dssp ETTEEEEECTTCCCEEEECS
T ss_pred CCCCEEEECCCCEEEeEeCC
Confidence 99999999999999999953
No 85
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=83.72 E-value=4.5 Score=38.84 Aligned_cols=72 Identities=17% Similarity=0.225 Sum_probs=54.3
Q ss_pred EEEEeCCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEE
Q 009311 255 NLWMNNAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKV 334 (538)
Q Consensus 255 ~lWiG~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~ 334 (538)
-+++=+.|+..+.|..+.+-++.++.|+=.|.+=- + -..
T Consensus 135 G~v~l~PG~~yP~HsHp~EEiy~VLsG~~e~~v~~-------------g----------------------------~~~ 173 (217)
T 4b29_A 135 TVGYWGPGLDYGWHEHLPEELYSVVSGRALFHLRN-------------A----------------------------PDL 173 (217)
T ss_dssp EEEEECSSCEEEEEECSSEEEEEEEEECEEEEETT-------------S----------------------------CCE
T ss_pred EEEEECCCCcCCCCCCCCceEEEEEeCCEEEEECC-------------C----------------------------CEE
Confidence 34443447889999999888999999998887610 0 136
Q ss_pred EEcCCCEEecCCCCeEEEeeC-CceEEEEEeeCC
Q 009311 335 ILHAGDALFIPEGWFHQVDSD-DLTIAVNFWWRS 367 (538)
Q Consensus 335 ~L~pGD~LfIP~gWWH~V~s~-~~sIaVN~w~~~ 367 (538)
+++|||++|||+|=-|.+++. +..+++=.|-..
T Consensus 174 ~l~pGd~v~ipsgv~Ha~rt~dePllalwvW~G~ 207 (217)
T 4b29_A 174 MLEPGQTRFHPANAPHAMTTLTDPILTLVLWRGA 207 (217)
T ss_dssp EECTTCEEEECTTCCEEEECCSSCEEEEEEEEST
T ss_pred ecCCCCEEEcCCCCceeEEECCccEEEEEEEeCC
Confidence 899999999999999999984 455566555443
No 86
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=83.71 E-value=5.6 Score=37.59 Aligned_cols=84 Identities=11% Similarity=0.155 Sum_probs=55.0
Q ss_pred cceEEEEeCCCCCceeeeccCCceeEEEE-eEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCc
Q 009311 252 AAINLWMNNAKSKSSAHYDPHHNLLCIVA-GCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEY 330 (538)
Q Consensus 252 ~~~~lWiG~~gs~T~lH~D~~~N~~~qI~-G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~ 330 (538)
...|.=.+..|+.-.+|+....=+..+++ |+=.-+++.-.. . |.|.+
T Consensus 60 ~Q~n~S~s~~GvlRGlH~h~q~Klv~~~~~G~v~dV~VDlR~----------------------S------pTfg~---- 107 (197)
T 1nxm_A 60 LQNNVSFSRKNVLRGLHAEPWDKYISVADGGKVLGTWVDLRE----------------------G------ETFGN---- 107 (197)
T ss_dssp CEEEEEEEETTBEEEEEECSSCEEEEECSSCCEEEEEEECBS----------------------S------TTTTC----
T ss_pred EEEEEEECCCCCcceeeecccceEEEEcCCCEEEEEEEECCC----------------------C------CCCCe----
Confidence 34565567789999999965455666677 773333322110 0 22221
Q ss_pred cEEEEEcCCCEEecCCCCeEEEeeCCceEEEEEeeCC
Q 009311 331 SQKVILHAGDALFIPEGWFHQVDSDDLTIAVNFWWRS 367 (538)
Q Consensus 331 ~~e~~L~pGD~LfIP~gWWH~V~s~~~sIaVN~w~~~ 367 (538)
...++|.++-.||||+|.||...+++....+.|--..
T Consensus 108 ~~~v~Ls~~~~L~IP~G~aHgf~~lsd~a~~~y~~s~ 144 (197)
T 1nxm_A 108 TYQTVIDASKSIFVPRGVANGFQVLSDFVAYSYLVND 144 (197)
T ss_dssp EEEEEECTTEEEEECTTEEEEEEECSSEEEEEEEESS
T ss_pred EEEEEeCCCcEEEeCCCeEEEEEeccCCeEEEEECCC
Confidence 3567888899999999999999998766555554444
No 87
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=83.68 E-value=1.1 Score=36.65 Aligned_cols=59 Identities=17% Similarity=0.115 Sum_probs=42.8
Q ss_pred CCCCCceeeeccC-Cce-eEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEc
Q 009311 260 NAKSKSSAHYDPH-HNL-LCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILH 337 (538)
Q Consensus 260 ~~gs~T~lH~D~~-~N~-~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~ 337 (538)
..|...+.|+... ..+ +.++.|+=.+.+ + + ..+..|+
T Consensus 41 ~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~---------------~----------------------~----~~~~~l~ 79 (110)
T 2q30_A 41 KAGQELPVHSHNIEGELNIVVLEGEGEFVG---------------D----------------------G----DAVIPAP 79 (110)
T ss_dssp CTTCEEEEECCSSSCEEEEEEEESCEEEEC---------------G----------------------G----GCEEEEC
T ss_pred CCCCcCCcccCCCCccEEEEEEeCEEEEEe---------------C----------------------C----CEEEEEC
Confidence 4467778888764 455 788888866542 0 0 0146899
Q ss_pred CCCEEecCCCCeEEEeeCCceE
Q 009311 338 AGDALFIPEGWFHQVDSDDLTI 359 (538)
Q Consensus 338 pGD~LfIP~gWWH~V~s~~~sI 359 (538)
+||+++||++-.|.+.+.+.+.
T Consensus 80 ~Gd~~~ip~~~~H~~~~~~~~~ 101 (110)
T 2q30_A 80 RGAVLVAPISTPHGVRAVTDMK 101 (110)
T ss_dssp TTEEEEEETTSCEEEEESSSEE
T ss_pred CCCEEEeCCCCcEEEEEcCCcE
Confidence 9999999999999999976543
No 88
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=82.50 E-value=12 Score=35.63 Aligned_cols=86 Identities=19% Similarity=0.192 Sum_probs=56.9
Q ss_pred cceEEEEe-CCCCCceeeecc----CCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccc
Q 009311 252 AAINLWMN-NAKSKSSAHYDP----HHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEH 326 (538)
Q Consensus 252 ~~~~lWiG-~~gs~T~lH~D~----~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~ 326 (538)
...|.=.+ .+|+.-.+|+-. ..=+..+++|+=.-+++.-. +. | |.|.+
T Consensus 69 ~Q~n~S~S~~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR------~~---------S------------pTfg~ 121 (205)
T 3ryk_A 69 VQDNVSYSAEAGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLR------KD---------S------------PTFKQ 121 (205)
T ss_dssp CEEEEEEESSTTBEEEEEEECTTSCCCEEEEEEESEEEEEEEECC------TT---------S------------TTTTC
T ss_pred eEEEEEEeCCCCcEeEeEecCCCCCceEEEEEeCCeEEEEEEECC------CC---------C------------CCCCe
Confidence 34566567 679999999984 24578889999444444311 10 0 22221
Q ss_pred cCCccEEEEEcC--CCEEecCCCCeEEEeeCCceEEEEEeeCCc
Q 009311 327 SGEYSQKVILHA--GDALFIPEGWFHQVDSDDLTIAVNFWWRSS 368 (538)
Q Consensus 327 a~~~~~e~~L~p--GD~LfIP~gWWH~V~s~~~sIaVN~w~~~~ 368 (538)
...++|.+ +-.||||+|+||-..+++.+..+.|+-...
T Consensus 122 ----~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~a~~~Y~~s~~ 161 (205)
T 3ryk_A 122 ----WRGYILSADNHRQLLVPKGFAHGFCTLVPHTIVMYKVDEY 161 (205)
T ss_dssp ----EEEEEEETTTCCEEEECTTEEEEEEECSSSEEEEEEESSC
T ss_pred ----EEEEEecCCCCCEEEeCCCceEEEEEcCCCEEEEEEcCCC
Confidence 34677765 899999999999999977665566665443
No 89
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=82.11 E-value=2.7 Score=38.78 Aligned_cols=75 Identities=11% Similarity=0.263 Sum_probs=53.6
Q ss_pred eCCCCCceeeeccC-CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEc
Q 009311 259 NNAKSKSSAHYDPH-HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILH 337 (538)
Q Consensus 259 G~~gs~T~lH~D~~-~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~ 337 (538)
+| |..|+.|-... .-++.+++|+=+-+.|.+.. +. |+. ..+.++.
T Consensus 77 ~P-Gq~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~----------~~-----------------~~~------~~~~~l~ 122 (171)
T 3eqe_A 77 PP-NKETTVHDHGQSIGCAMVLEGKLLNSIYRSTG----------EH-----------------AEL------SNSYFVH 122 (171)
T ss_dssp CT-TCBCCEECCTTCEEEEEEEESEEEEEEEEECS----------SS-----------------EEE------EEEEEEE
T ss_pred CC-CCCcccccCCCceEEEEEEeeeEEEEEeecCC----------Cc-----------------eee------cceEEeC
Confidence 44 88999987664 46777999999988775321 00 110 2467899
Q ss_pred CCCEEecCCCCeEEEeeC--CceEEEEEeeCC
Q 009311 338 AGDALFIPEGWFHQVDSD--DLTIAVNFWWRS 367 (538)
Q Consensus 338 pGD~LfIP~gWWH~V~s~--~~sIaVN~w~~~ 367 (538)
+||+.+.|++..|+|.|. +.+|+|...-.+
T Consensus 123 ~G~~~~~~~~~iH~V~N~~~~~aVSlHvY~pp 154 (171)
T 3eqe_A 123 EGECLISTKGLIHKMSNPTSERMVSLHVYSPP 154 (171)
T ss_dssp TTCEEEECTTCEEEEECCSSSCEEEEEEEESC
T ss_pred CCcEEEeCCCCEEEEECCCCCCEEEEEEeCCC
Confidence 999999999999999994 466776665444
No 90
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=82.04 E-value=14 Score=35.04 Aligned_cols=84 Identities=13% Similarity=0.122 Sum_probs=54.8
Q ss_pred ceEEEEeCCCCCceeeeccC----CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccC
Q 009311 253 AINLWMNNAKSKSSAHYDPH----HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSG 328 (538)
Q Consensus 253 ~~~lWiG~~gs~T~lH~D~~----~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~ 328 (538)
..|.=.+..|+.-.+|+... .=+..+++|+=.-+++.-. +. | |.|.+
T Consensus 48 Q~n~S~s~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR------~~---------S------------pTfG~-- 98 (205)
T 1oi6_A 48 QTIHSMSKRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIR------VG---------S------------PTFGQ-- 98 (205)
T ss_dssp EEEEEEECTTBEEEEEEECTTTCCCEEEEEEESCEEEEEECCC------BT---------C------------TTTTC--
T ss_pred EEEEEeCCCCeEeeeeccCCCCCCceEEEEeCCEEEEEEEECC------CC---------C------------CCCCe--
Confidence 35655677788889999853 4467888998544444421 10 0 12221
Q ss_pred CccEEEEEcC--CCEEecCCCCeEEEeeCCceEEEEEeeCC
Q 009311 329 EYSQKVILHA--GDALFIPEGWFHQVDSDDLTIAVNFWWRS 367 (538)
Q Consensus 329 ~~~~e~~L~p--GD~LfIP~gWWH~V~s~~~sIaVN~w~~~ 367 (538)
...++|.+ +..||||+|+||...+++.+.-+.|+-..
T Consensus 99 --~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y~~s~ 137 (205)
T 1oi6_A 99 --WDSVLMDQQDPRAVYLPVGVGHAFVALEDDTVMSYMLSR 137 (205)
T ss_dssp --EEEEEECSSSCCEEEECTTCEEEEEECSTTEEEEEEESS
T ss_pred --EEEEEecCCCCCEEEeCCCeeEEEEEccCCeEEEEecCC
Confidence 34677776 58999999999999997766455555444
No 91
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=81.94 E-value=5.2 Score=37.06 Aligned_cols=65 Identities=20% Similarity=0.379 Sum_probs=52.0
Q ss_pred eEEEEeCCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEE
Q 009311 254 INLWMNNAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQK 333 (538)
Q Consensus 254 ~~lWiG~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e 333 (538)
.-+++|+.++++..|+++.+-++.|+.|.=...+-.. | ....
T Consensus 37 ~V~~v~Gpn~r~d~H~h~~dE~FyvlkG~m~i~v~d~------------g--------------------------~~~~ 78 (174)
T 1yfu_A 37 IVTVVGGPNHRTDYHDDPLEEFFYQLRGNAYLNLWVD------------G--------------------------RRER 78 (174)
T ss_dssp EEEEECSCBCCCCEEECSSCEEEEEEESCEEEEEEET------------T--------------------------EEEE
T ss_pred EEEEEcCCCcCccCcCCCCceEEEEEeeEEEEEEEcC------------C--------------------------ceee
Confidence 5578999999999999999999999999876655320 0 0246
Q ss_pred EEEcCCCEEecCCCCeEEEeeCC
Q 009311 334 VILHAGDALFIPEGWFHQVDSDD 356 (538)
Q Consensus 334 ~~L~pGD~LfIP~gWWH~V~s~~ 356 (538)
+.|++||++.+|+|=-|.-...+
T Consensus 79 v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 79 ADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp EEECTTCEEEECTTCCEEEEBCC
T ss_pred EEECCCCEEEeCCCCCcCccccC
Confidence 89999999999999999886543
No 92
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=81.45 E-value=13 Score=34.49 Aligned_cols=84 Identities=19% Similarity=0.095 Sum_probs=53.2
Q ss_pred ceEEEEeCCCCCceeeecc----CCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccC
Q 009311 253 AINLWMNNAKSKSSAHYDP----HHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSG 328 (538)
Q Consensus 253 ~~~lWiG~~gs~T~lH~D~----~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~ 328 (538)
..|.=.+..|+.-.+|+.. ..=+..+++|+=.-+++.-. +. | |.|.+
T Consensus 48 Q~n~S~s~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R------~~---------S------------pTfg~-- 98 (183)
T 1dzr_A 48 QDNHSKSKKNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIR------KE---------S------------PTFGQ-- 98 (183)
T ss_dssp EEEEEEEETTBEEEEEEECGGGCCCEEEEEEESEEEEEEEECC------TT---------C------------TTTTC--
T ss_pred EEEEEeCCCCeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECC------CC---------C------------CCCCe--
Confidence 3555556678889999974 24568888998544444311 10 0 11221
Q ss_pred CccEEEEEcC--CCEEecCCCCeEEEeeCCceEEEEEeeCC
Q 009311 329 EYSQKVILHA--GDALFIPEGWFHQVDSDDLTIAVNFWWRS 367 (538)
Q Consensus 329 ~~~~e~~L~p--GD~LfIP~gWWH~V~s~~~sIaVN~w~~~ 367 (538)
...++|.+ +..||||+|+||...+++...-+.|+-..
T Consensus 99 --~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y~~s~ 137 (183)
T 1dzr_A 99 --WVGVNLSAENKRQLWIPEGFAHGFVTLSEYAEFLYKATN 137 (183)
T ss_dssp --EEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEEESS
T ss_pred --EEEEEecCCCCCEEEeCCCeEEEEEEcCCCeEEEEEcCC
Confidence 24566665 68999999999999998776445554333
No 93
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=81.37 E-value=1.2 Score=36.79 Aligned_cols=25 Identities=16% Similarity=0.361 Sum_probs=22.1
Q ss_pred EEEEcCCCEEecCCCCeEEEeeCCc
Q 009311 333 KVILHAGDALFIPEGWFHQVDSDDL 357 (538)
Q Consensus 333 e~~L~pGD~LfIP~gWWH~V~s~~~ 357 (538)
...|+|||+++||++=.|...+.+.
T Consensus 68 ~~~l~~Gd~~~ip~~~~H~~~~~~~ 92 (107)
T 2i45_A 68 SMTIREGEMAVVPKSVSHRPRSENG 92 (107)
T ss_dssp EEEECTTEEEEECTTCCEEEEEEEE
T ss_pred EEEECCCCEEEECCCCcEeeEeCCC
Confidence 4789999999999999999999543
No 94
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=81.16 E-value=7.6 Score=38.54 Aligned_cols=25 Identities=28% Similarity=0.461 Sum_probs=22.6
Q ss_pred EEEEcCCCEEecCCCCeEEEeeCCc
Q 009311 333 KVILHAGDALFIPEGWFHQVDSDDL 357 (538)
Q Consensus 333 e~~L~pGD~LfIP~gWWH~V~s~~~ 357 (538)
+..|++||++|||++-.|...|.+.
T Consensus 258 ~~~l~~GD~~~ip~~~~H~~~n~~~ 282 (337)
T 1y3t_A 258 EIQLNPGDFLHVPANTVHSYRLDSH 282 (337)
T ss_dssp EEEECTTCEEEECTTCCEEEEECSS
T ss_pred EEEECCCCEEEECCCCeEEEEECCC
Confidence 5799999999999999999999654
No 95
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=80.68 E-value=1.4 Score=38.16 Aligned_cols=56 Identities=20% Similarity=0.270 Sum_probs=42.1
Q ss_pred EeCCCCCceeeecc-CCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEE
Q 009311 258 MNNAKSKSSAHYDP-HHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVIL 336 (538)
Q Consensus 258 iG~~gs~T~lH~D~-~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L 336 (538)
+.+ |..++.|... ..-++.++.|+=.+.+ + ..+..|
T Consensus 64 ~~p-g~~~~~H~H~~~~E~~~Vl~G~~~~~i---------------~---------------------------~~~~~l 100 (133)
T 1o4t_A 64 LPP-GSSVGLHKHEGEFEIYYILLGEGVFHD---------------N---------------------------GKDVPI 100 (133)
T ss_dssp ECT-TCEEEEEECCSEEEEEEEEESEEEEEE---------------T---------------------------TEEEEE
T ss_pred ECC-CCccCceECCCccEEEEEEeCEEEEEE---------------C---------------------------CEEEEe
Confidence 444 5666788865 3567888999877654 0 125789
Q ss_pred cCCCEEecCCCCeEEEeeCC
Q 009311 337 HAGDALFIPEGWFHQVDSDD 356 (538)
Q Consensus 337 ~pGD~LfIP~gWWH~V~s~~ 356 (538)
+|||+++||++-.|...|.+
T Consensus 101 ~~Gd~i~i~~~~~H~~~n~~ 120 (133)
T 1o4t_A 101 KAGDVCFTDSGESHSIENTG 120 (133)
T ss_dssp ETTEEEEECTTCEEEEECCS
T ss_pred CCCcEEEECCCCcEEeEECC
Confidence 99999999999999999853
No 96
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=80.41 E-value=13 Score=35.09 Aligned_cols=85 Identities=20% Similarity=0.229 Sum_probs=56.9
Q ss_pred eEEEEeCCCCCceeeeccC----CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCC
Q 009311 254 INLWMNNAKSKSSAHYDPH----HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGE 329 (538)
Q Consensus 254 ~~lWiG~~gs~T~lH~D~~----~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~ 329 (538)
.|.=.+..|+.-.+|+... .=+..+++|+=..+++.-... | |.|.+
T Consensus 67 ~n~S~s~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~---------------S------------pTfG~--- 116 (196)
T 1wlt_A 67 TNMSFSRKGVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKS---------------S------------PTFGK--- 116 (196)
T ss_dssp EEEEEECTTBEEEEEEECTTSCCEEEEEEEESEEEEEEEECBTT---------------S------------TTTTC---
T ss_pred EEEEECCCCcceeEEccCCCCCCceEEEEeCCEEEEEEEECCCC---------------C------------CCCCe---
Confidence 5555667788889999853 346778899876666542110 0 11221
Q ss_pred ccEEEEEcC--CCEEecCCCCeEEEeeCCceEEEEEeeCCcc
Q 009311 330 YSQKVILHA--GDALFIPEGWFHQVDSDDLTIAVNFWWRSSI 369 (538)
Q Consensus 330 ~~~e~~L~p--GD~LfIP~gWWH~V~s~~~sIaVN~w~~~~~ 369 (538)
...++|.+ +..||||+|+||...+++.+.-+.|+-...+
T Consensus 117 -~~~v~Ls~en~~~L~IP~G~aHgf~~lsd~a~~ly~~s~~Y 157 (196)
T 1wlt_A 117 -YVKAELNEENHYMLWIPPGFAHGFQALEDSIVIYFITHNEY 157 (196)
T ss_dssp -EEEEEEETTTCCEEEECTTEEEEEEESSSEEEEEEEESSCC
T ss_pred -EEEEEecCCCCCEEEeCCCeEEEEEEcCCCeEEEEEeCCcC
Confidence 24567764 7999999999999999877766666654433
No 97
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=80.02 E-value=5.8 Score=36.75 Aligned_cols=73 Identities=15% Similarity=0.241 Sum_probs=55.4
Q ss_pred eEEEEeCCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEE
Q 009311 254 INLWMNNAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQK 333 (538)
Q Consensus 254 ~~lWiG~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e 333 (538)
.-+++|+.++++..|+|+.+-++.|+.|.=...+.... .. . + ....
T Consensus 36 ~V~~vgGPn~r~D~H~~~~eE~Fy~lkG~m~l~v~d~g------------~~-------------~--~-------~~~d 81 (176)
T 1zvf_A 36 TVMIVGGPNERTDYHINPTPEWFYQKKGSMLLKVVDET------------DA-------------E--P-------KFID 81 (176)
T ss_dssp EEEEECSSBCCSCEEECSSCEEEEEEESCEEEEEEECS------------SS-------------S--C-------EEEE
T ss_pred EEEEEcCCCcCCcCcCCCCceEEEEEeCEEEEEEEcCC------------Cc-------------c--c-------ceee
Confidence 56789988999999999999999999998776664210 00 0 0 1246
Q ss_pred EEEcCCCEEecCCCCeEEEeeCCceEE
Q 009311 334 VILHAGDALFIPEGWFHQVDSDDLTIA 360 (538)
Q Consensus 334 ~~L~pGD~LfIP~gWWH~V~s~~~sIa 360 (538)
+.+++||+..+|+|=-|.-.....++.
T Consensus 82 v~i~eGdmfllP~gvpHsP~r~~e~v~ 108 (176)
T 1zvf_A 82 IIINEGDSYLLPGNVPHSPVRFADTVG 108 (176)
T ss_dssp EEECTTEEEEECTTCCEEEEECTTCEE
T ss_pred EEECCCCEEEcCCCCCcCCcccCCcEE
Confidence 899999999999999999865444444
No 98
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=79.91 E-value=25 Score=31.22 Aligned_cols=66 Identities=14% Similarity=0.205 Sum_probs=46.2
Q ss_pred CCCCceeeeccC-CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEcCC
Q 009311 261 AKSKSSAHYDPH-HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILHAG 339 (538)
Q Consensus 261 ~gs~T~lH~D~~-~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~pG 339 (538)
.|+.-..|.... .-++..++|+=+++|..... ..+++|...
T Consensus 44 ~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldDg~~--------------------------------------~~~~~L~~~ 85 (141)
T 2pa7_A 44 GEEPRGFHAHKKLEQVLVCLNGSCRVILDDGNI--------------------------------------IQEITLDSP 85 (141)
T ss_dssp SSCCEEEEEESSCCEEEEEEESCEEEEEECSSC--------------------------------------EEEEEECCT
T ss_pred CCCEECcCcCCCceEEEEEEccEEEEEEECCcE--------------------------------------EEEEEECCC
Confidence 678788887664 56788899999999943210 023445443
Q ss_pred C-EEecCCCCeEEEeeC-CceEEEEEe
Q 009311 340 D-ALFIPEGWFHQVDSD-DLTIAVNFW 364 (538)
Q Consensus 340 D-~LfIP~gWWH~V~s~-~~sIaVN~w 364 (538)
. .|+||+|-||.+.+. +.++.+++=
T Consensus 86 ~~gL~IppgvWh~~~~~s~~avllvla 112 (141)
T 2pa7_A 86 AVGLYVGPAVWHEMHDFSSDCVMMVLA 112 (141)
T ss_dssp TEEEEECTTCEEEEECCCTTCEEEEEE
T ss_pred CcEEEeCCCEEEEEEEcCCCeEEEEEC
Confidence 3 599999999999995 456666654
No 99
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=79.28 E-value=9 Score=33.69 Aligned_cols=34 Identities=24% Similarity=0.567 Sum_probs=27.2
Q ss_pred EEEEEcCCCEEecCCCCeEEEee--CCceEEEEEee
Q 009311 332 QKVILHAGDALFIPEGWFHQVDS--DDLTIAVNFWW 365 (538)
Q Consensus 332 ~e~~L~pGD~LfIP~gWWH~V~s--~~~sIaVN~w~ 365 (538)
.+....+|+..+||++-||.|.. .+.-+-|+||-
T Consensus 65 ~~~l~~~~~~~~i~Pq~wH~Ve~lsdd~~f~leFyc 100 (127)
T 3bb6_A 65 QVILIEAGQFAVFPPEKWHNIEAMTDDTYFNIDFFV 100 (127)
T ss_dssp EEEEEEBTBEEECCSSCEEEEEESSTTCEEEEEEEE
T ss_pred EEEEeCCCCceEECCCCcEEEEEcCCCEEEEEEEEe
Confidence 35788999999999999999996 44555577753
No 100
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=78.93 E-value=7 Score=37.26 Aligned_cols=77 Identities=17% Similarity=0.247 Sum_probs=54.4
Q ss_pred CCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEcCC
Q 009311 260 NAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILHAG 339 (538)
Q Consensus 260 ~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~pG 339 (538)
+.|..|++|-....-+..++.|.=+-..|..... +. + ... .-+.++.+|
T Consensus 81 ~PGq~spiHDH~swg~~~Vl~G~l~e~~y~~~~~---------g~-----------------~--~~~---~~~~~l~~G 129 (211)
T 3uss_A 81 GPGQITPVHDHRVWGLIGMLRGAEYSQPYAFDAG---------GR-----------------P--HPS---GARRRLEPG 129 (211)
T ss_dssp CTTCBCCSBCCSSCEEEEEEESCEEEEEEEECTT---------SC-----------------E--EEC---SCCEEECTT
T ss_pred CCCCcCCCCCCCeeEEEEeeeceEEEEEeeeCCC---------CC-----------------c--ccc---cceEEecCC
Confidence 4588999998776778999999988877653211 00 0 000 114789999
Q ss_pred CEEecCCC--CeEEEeeC---CceEEEEEeeCC
Q 009311 340 DALFIPEG--WFHQVDSD---DLTIAVNFWWRS 367 (538)
Q Consensus 340 D~LfIP~g--WWH~V~s~---~~sIaVN~w~~~ 367 (538)
|+.+++++ ..|+|.|. +.+|++...-..
T Consensus 130 ~v~~~~p~~g~IH~V~N~~~d~~avSLHvYg~p 162 (211)
T 3uss_A 130 EVEALSPRIGDVHQVSNAFSDRTSISIHVYGAN 162 (211)
T ss_dssp CEEEEBTTTBCCEEEEESCSSSCEEEEEEESSC
T ss_pred CEEEECCCCCCEEEEccCCCCCCEEEEEEcCCC
Confidence 99999877 99999984 457888775444
No 101
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=78.00 E-value=2.3 Score=37.32 Aligned_cols=25 Identities=32% Similarity=0.539 Sum_probs=21.8
Q ss_pred EEEEcCCCEEecCCCCeEEEeeCCc
Q 009311 333 KVILHAGDALFIPEGWFHQVDSDDL 357 (538)
Q Consensus 333 e~~L~pGD~LfIP~gWWH~V~s~~~ 357 (538)
..+|+|||++|||++..|...+.+.
T Consensus 94 ~~~l~~GD~i~~p~g~~h~~~~~~~ 118 (133)
T 2pyt_A 94 TMIAKAGDVMFIPKGSSIEFGTPTS 118 (133)
T ss_dssp EEEEETTCEEEECTTCEEEEEEEEE
T ss_pred EEEECCCcEEEECCCCEEEEEeCCC
Confidence 4689999999999999999987543
No 102
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=77.95 E-value=12 Score=35.53 Aligned_cols=64 Identities=14% Similarity=0.252 Sum_probs=47.0
Q ss_pred eEEEEeCCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEE
Q 009311 254 INLWMNNAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQK 333 (538)
Q Consensus 254 ~~lWiG~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e 333 (538)
+.+|-=.+|...+.|..+..-++.++.|+=.+.+ + ..+
T Consensus 155 ~~~~~~~~G~~~~~H~H~~~e~~~Vl~G~~~~~i---------------~---------------------------g~~ 192 (227)
T 3rns_A 155 MTIMSFWKGESLDPHKAPGDALVTVLDGEGKYYV---------------D---------------------------GKP 192 (227)
T ss_dssp EEEEEECTTCEEEEECCSSEEEEEEEEEEEEEEE---------------T---------------------------TEE
T ss_pred EEEEEECCCCccCCEECCCcEEEEEEeEEEEEEE---------------C---------------------------CEE
Confidence 3444334467778888777678888898876554 0 125
Q ss_pred EEEcCCCEEecCCCCeEEEee-CCceE
Q 009311 334 VILHAGDALFIPEGWFHQVDS-DDLTI 359 (538)
Q Consensus 334 ~~L~pGD~LfIP~gWWH~V~s-~~~sI 359 (538)
..|++||+++||++-.|.+.+ .+.+-
T Consensus 193 ~~l~~Gd~i~ip~~~~H~~~~~~~~~~ 219 (227)
T 3rns_A 193 FIVKKGESAVLPANIPHAVEAETENFK 219 (227)
T ss_dssp EEEETTEEEEECTTSCEEEECCSSCEE
T ss_pred EEECCCCEEEECCCCcEEEEeCCCCEE
Confidence 799999999999999999999 65443
No 103
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=77.77 E-value=9.7 Score=33.48 Aligned_cols=58 Identities=21% Similarity=0.266 Sum_probs=43.8
Q ss_pred EEEeCCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEE-E
Q 009311 256 LWMNNAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQK-V 334 (538)
Q Consensus 256 lWiG~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e-~ 334 (538)
+.+.+ |...+.|.....-+..++.|+=++.+= + .+ .
T Consensus 53 ~~~~p-g~~~~~H~H~~~E~~~Vl~G~~~~~~~--------------~----------------------------~~~~ 89 (147)
T 2f4p_A 53 VVFEP-GARTHWHSHPGGQILIVTRGKGFYQER--------------G----------------------------KPAR 89 (147)
T ss_dssp EEECT-TCEECSEECTTCEEEEEEEEEEEEEET--------------T----------------------------SCCE
T ss_pred EEECC-CCccCceECCCceEEEEEeCEEEEEEC--------------C----------------------------EEEE
Confidence 33444 666778988777789999998876540 0 02 5
Q ss_pred EEcCCCEEecCCCCeEEEeeCC
Q 009311 335 ILHAGDALFIPEGWFHQVDSDD 356 (538)
Q Consensus 335 ~L~pGD~LfIP~gWWH~V~s~~ 356 (538)
.|+|||+++||++=.|...+.+
T Consensus 90 ~l~~Gd~i~ip~~~~H~~~n~~ 111 (147)
T 2f4p_A 90 ILKKGDVVEIPPNVVHWHGAAP 111 (147)
T ss_dssp EEETTCEEEECTTCCEEEEEBT
T ss_pred EECCCCEEEECCCCcEEeEeCC
Confidence 8999999999999999999843
No 104
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=76.97 E-value=26 Score=33.62 Aligned_cols=85 Identities=16% Similarity=0.164 Sum_probs=55.2
Q ss_pred cceEEEEeCCCCCceeeeccC----CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCccccc
Q 009311 252 AAINLWMNNAKSKSSAHYDPH----HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHS 327 (538)
Q Consensus 252 ~~~~lWiG~~gs~T~lH~D~~----~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a 327 (538)
...|.-.+..|+.-.+|+... .=+..+++|+=.-+++.- .+. | |.|.+
T Consensus 66 ~Q~n~S~s~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDl------R~~---------S------------pTfG~- 117 (225)
T 1upi_A 66 RQVNCSVSSAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDI------REG---------S------------PTFGR- 117 (225)
T ss_dssp CEEEEEEECTTBEEEEEEECTTTCCCEEEEEEESEEEEEEECC------CBT---------C------------TTTTC-
T ss_pred EEEEEEeCCCCeEeeeeccCCCCCcceEEEEeCCeEEEEEEEC------CCC---------C------------CCCCc-
Confidence 345666677788889999853 457888899854444431 110 0 11211
Q ss_pred CCccEEEEEcC--CCEEecCCCCeEEEeeCCceEEEEEeeCC
Q 009311 328 GEYSQKVILHA--GDALFIPEGWFHQVDSDDLTIAVNFWWRS 367 (538)
Q Consensus 328 ~~~~~e~~L~p--GD~LfIP~gWWH~V~s~~~sIaVN~w~~~ 367 (538)
...++|.+ +..||||+|+||...+++.+.-+.|+-..
T Consensus 118 ---~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~a~vly~~s~ 156 (225)
T 1upi_A 118 ---WDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYLCSA 156 (225)
T ss_dssp ---EEEEEEETTTCCEEEECTTCEEEEEECSSSEEEEEEESS
T ss_pred ---EEEEEecCCCCcEEEeCCCeeEEEEEcCCCEEEEEecCC
Confidence 24567766 58999999999999997766455555444
No 105
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=76.39 E-value=2 Score=37.39 Aligned_cols=26 Identities=31% Similarity=0.525 Sum_probs=22.6
Q ss_pred EEEEcCCCEEecCCCCeEEEeeCCce
Q 009311 333 KVILHAGDALFIPEGWFHQVDSDDLT 358 (538)
Q Consensus 333 e~~L~pGD~LfIP~gWWH~V~s~~~s 358 (538)
...|+|||+++||+|.-|...+.+..
T Consensus 88 ~~~l~~GD~~~ip~g~~h~~~~~~~~ 113 (123)
T 3bcw_A 88 VHAVKAGDAFIMPEGYTGRWEVDRHV 113 (123)
T ss_dssp EEEEETTCEEEECTTCCCEEEEEEEE
T ss_pred EEEECCCCEEEECCCCeEEEEECCce
Confidence 47899999999999999999986543
No 106
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=75.57 E-value=2.8 Score=38.52 Aligned_cols=23 Identities=22% Similarity=0.434 Sum_probs=21.7
Q ss_pred EEEEcCCCEEecCCCCeEEEeeC
Q 009311 333 KVILHAGDALFIPEGWFHQVDSD 355 (538)
Q Consensus 333 e~~L~pGD~LfIP~gWWH~V~s~ 355 (538)
+..|+|||++|+|++-.|.+.|.
T Consensus 163 ~~~l~~GD~~~~~~~~~H~~~n~ 185 (198)
T 2bnm_A 163 EALLPTGASMFVEEHVPHAFTAA 185 (198)
T ss_dssp EEEECTTCEEEECTTCCEEEEES
T ss_pred cEEECCCCEEEeCCCCceEEEec
Confidence 57999999999999999999987
No 107
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=75.28 E-value=24 Score=33.74 Aligned_cols=84 Identities=15% Similarity=0.067 Sum_probs=54.4
Q ss_pred ceEEEEeCCCCCceeeeccC----CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccC
Q 009311 253 AINLWMNNAKSKSSAHYDPH----HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSG 328 (538)
Q Consensus 253 ~~~lWiG~~gs~T~lH~D~~----~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~ 328 (538)
..|.-.+..|+.-.+|+... .=+..+++|+=.-+++.-. +. | |.|.+
T Consensus 56 Q~n~S~s~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR------~~---------S------------pTfG~-- 106 (216)
T 2c0z_A 56 QANLSVSVRGVVRGIHFVDVPPGQAKYVTCVRGAVFDVVVDLR------VG---------S------------PTYGC-- 106 (216)
T ss_dssp EEEEEEEETTBEEEEEEECTTTCCCEEEEEEESEEEEEEEECC------BT---------C------------TTTTC--
T ss_pred EEEEEeCCCCcEEcCEecCCCCCcceEEEEeCCeEEEEEEECC------CC---------C------------CCCCe--
Confidence 35655666788889999853 4578888998544444311 10 0 11211
Q ss_pred CccEEEEEcC--CCEEecCCCCeEEEeeCCceEEEEEeeCC
Q 009311 329 EYSQKVILHA--GDALFIPEGWFHQVDSDDLTIAVNFWWRS 367 (538)
Q Consensus 329 ~~~~e~~L~p--GD~LfIP~gWWH~V~s~~~sIaVN~w~~~ 367 (538)
...++|.+ +..||||+|+||...+++.+.-+.|+-..
T Consensus 107 --~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~a~~ly~~s~ 145 (216)
T 2c0z_A 107 --WEGTRLDDVSRRAVYLSEGIGHGFCAISDEATLCYLSSG 145 (216)
T ss_dssp --EEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEEESS
T ss_pred --EEEEEecCCCCCEEEeCCCeeEEEEEcCCCeEEEEecCC
Confidence 24567766 47999999999999998776555555444
No 108
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=74.28 E-value=2.7 Score=35.88 Aligned_cols=53 Identities=15% Similarity=0.224 Sum_probs=40.0
Q ss_pred CCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEcCCCE
Q 009311 262 KSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILHAGDA 341 (538)
Q Consensus 262 gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~pGD~ 341 (538)
+...+.|+....-++.++.|+=++.+ + ..+..|+|||+
T Consensus 58 g~~~~~H~H~~~e~~~Vl~G~~~~~i---------------~---------------------------~~~~~l~~Gd~ 95 (126)
T 1vj2_A 58 GGLIDRHSHPWEHEIFVLKGKLTVLK---------------E---------------------------QGEETVEEGFY 95 (126)
T ss_dssp EEEEEEECCSSCEEEEEEESEEEEEC---------------S---------------------------SCEEEEETTEE
T ss_pred CCcCCceeCCCcEEEEEEEeEEEEEE---------------C---------------------------CEEEEECCCCE
Confidence 44556788777777888888766543 0 01468999999
Q ss_pred EecCCCCeEEEeeCC
Q 009311 342 LFIPEGWFHQVDSDD 356 (538)
Q Consensus 342 LfIP~gWWH~V~s~~ 356 (538)
++||++-.|...+.+
T Consensus 96 i~ip~g~~H~~~~~~ 110 (126)
T 1vj2_A 96 IFVEPNEIHGFRNDT 110 (126)
T ss_dssp EEECTTCCEEEECCS
T ss_pred EEECCCCcEEeEeCC
Confidence 999999999999854
No 109
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=73.64 E-value=6.2 Score=40.24 Aligned_cols=55 Identities=20% Similarity=0.149 Sum_probs=40.2
Q ss_pred CCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEcCCCE
Q 009311 262 KSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILHAGDA 341 (538)
Q Consensus 262 gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~pGD~ 341 (538)
+...+.|.-+.+-++.++.|+=++++=-. ...+|++||+
T Consensus 262 g~~~~~h~~~~~~~~~vleG~~~i~i~g~-----------------------------------------~~~~l~~Gd~ 300 (350)
T 1juh_A 262 TVTVPTWSFPGACAFQVQEGRVVVQIGDY-----------------------------------------AATELGSGDV 300 (350)
T ss_dssp TSCCCCBCCSSCEEEEEEESCEEEEETTS-----------------------------------------CCEEECTTCE
T ss_pred CCCCCcccCCCcEEEEEEeeEEEEEECCe-----------------------------------------EEEEeCCCCE
Confidence 44566666666777777777766665100 1369999999
Q ss_pred EecCCCCeEEEeeCCc
Q 009311 342 LFIPEGWFHQVDSDDL 357 (538)
Q Consensus 342 LfIP~gWWH~V~s~~~ 357 (538)
+|||+|-.|.+.+.+.
T Consensus 301 ~~iPag~~h~~~~~~~ 316 (350)
T 1juh_A 301 AFIPGGVEFKYYSEAY 316 (350)
T ss_dssp EEECTTCCEEEEESSS
T ss_pred EEECCCCCEEEEecCC
Confidence 9999999999999644
No 110
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=72.89 E-value=41 Score=31.75 Aligned_cols=85 Identities=16% Similarity=0.124 Sum_probs=57.2
Q ss_pred cceEEEEeCCCCCceeeecc----CCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCccccc
Q 009311 252 AAINLWMNNAKSKSSAHYDP----HHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHS 327 (538)
Q Consensus 252 ~~~~lWiG~~gs~T~lH~D~----~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a 327 (538)
...|.=.+.+|+.-.+||-. ..=+..+++|+=.-+++.-. +. . |.|.+
T Consensus 44 vQ~n~S~S~~GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR------~~---------------S------pTfG~- 95 (201)
T 4hn1_A 44 AQVNVAVSHRGALRGINYTEIPPGQAKYSVCVRGAGLDVVVDVR------IG---------------S------PTFGR- 95 (201)
T ss_dssp CEEEEEEECTTBEEEEEEECSSSCCCEEEEEEESEEEEEEECCC------BT---------------C------TTTTC-
T ss_pred eEEEEEEcCCCceEEEEecCCCCCceEEEEEeCCeEEEEEEECC------CC---------------C------CCCCe-
Confidence 34566677789999999974 24578889999665565521 11 0 22221
Q ss_pred CCccEEEEEcC--CCEEecCCCCeEEEeeCCceEEEEEeeCC
Q 009311 328 GEYSQKVILHA--GDALFIPEGWFHQVDSDDLTIAVNFWWRS 367 (538)
Q Consensus 328 ~~~~~e~~L~p--GD~LfIP~gWWH~V~s~~~sIaVN~w~~~ 367 (538)
...++|.+ +-.||||+|.||-..+++.+..+.|--..
T Consensus 96 ---w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~a~~~Y~~t~ 134 (201)
T 4hn1_A 96 ---WEIVPMDAERNTAVYLTAGLGRAFLSLTDDATLVFLCSS 134 (201)
T ss_dssp ---EEEEEEETTTCCEEEECTTCEEEEEECSTTEEEEEEESS
T ss_pred ---EEEEEecCCCCCEEEeCCcceEEEeecCCCeEEEEeCCC
Confidence 34566765 88999999999999997766666554333
No 111
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=72.21 E-value=1.2 Score=36.99 Aligned_cols=24 Identities=21% Similarity=0.264 Sum_probs=21.4
Q ss_pred EEEEcCCCEEecCCCCeEEEeeCC
Q 009311 333 KVILHAGDALFIPEGWFHQVDSDD 356 (538)
Q Consensus 333 e~~L~pGD~LfIP~gWWH~V~s~~ 356 (538)
+..++|||++|+|+|-.|.+.|.+
T Consensus 60 ~~~l~aGd~~~~p~G~~H~~~N~g 83 (98)
T 2ozi_A 60 LAQLKTGRSYARKAGVQHDVRNES 83 (98)
T ss_dssp CCCBCTTCCEEECTTCEEEEEECS
T ss_pred EEEECCCCEEEECCCCceeCEECC
Confidence 357999999999999999999954
No 112
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=72.21 E-value=5.6 Score=42.18 Aligned_cols=62 Identities=21% Similarity=0.208 Sum_probs=47.1
Q ss_pred EEEeCCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEE
Q 009311 256 LWMNNAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVI 335 (538)
Q Consensus 256 lWiG~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~ 335 (538)
+=+.| |+..+.|+-..+=|+.++.|+=++.++.|+. ..+..
T Consensus 91 ~~l~P-gg~~~pHh~~a~E~~yVl~G~g~v~~v~~~~--------------------------------------~~~~~ 131 (445)
T 2cav_A 91 YCSKP-NTLLLPHHSDSDLLVLVLEGQAILVLVNPDG--------------------------------------RDTYK 131 (445)
T ss_dssp EEECS-SEEEEEEEESSEEEEEEEESEEEEEEEETTE--------------------------------------EEEEE
T ss_pred EEECC-CcCccCcCCCCceEEEEEeCEEEEEEEeCCC--------------------------------------CEEEE
Confidence 33555 6677778443467899999999988875431 02468
Q ss_pred EcCCCEEecCCCCeEEEeeCC
Q 009311 336 LHAGDALFIPEGWFHQVDSDD 356 (538)
Q Consensus 336 L~pGD~LfIP~gWWH~V~s~~ 356 (538)
|++||++|||+|--|.+.|.+
T Consensus 132 l~~GDv~~~P~G~~H~~~N~g 152 (445)
T 2cav_A 132 LDQGDAIKIQAGTPFYLINPD 152 (445)
T ss_dssp EETTEEEEECTTCCEEEEECC
T ss_pred ecCCCEEEECCCCcEEEEECC
Confidence 999999999999999999964
No 113
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=71.90 E-value=19 Score=31.27 Aligned_cols=59 Identities=22% Similarity=0.515 Sum_probs=44.6
Q ss_pred eeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEcCCCEEecCCCCeEEEee
Q 009311 275 LLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILHAGDALFIPEGWFHQVDS 354 (538)
Q Consensus 275 ~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~pGD~LfIP~gWWH~V~s 354 (538)
.++++.|+=+++.+.-+... . ...++.+.+|+.-+||+.-||.|.-
T Consensus 41 kL~Vl~G~Lkf~~~~e~~~~--------------------------------~--~~~~~~~~~~~~~~i~Pq~wHrVe~ 86 (119)
T 3dl3_A 41 QICVMEGVVTYYGFANSEAT--------------------------------E--PEIKVVINAGQFATSPPQYWHRIEL 86 (119)
T ss_dssp EEEEEESEEEEEEESSTTCC--------------------------------S--CSEEEEEETTEEEEECTTCEEEEEE
T ss_pred EEEEEEeEEEEEEEcCCCCC--------------------------------c--ccEEEEeCCCCCceeCCCceEEEEE
Confidence 47999999999987633210 0 0246789999999999999999995
Q ss_pred -CCceEEEEEeeCC
Q 009311 355 -DDLTIAVNFWWRS 367 (538)
Q Consensus 355 -~~~sIaVN~w~~~ 367 (538)
.+.-.-|+||-..
T Consensus 87 sdD~~f~leFyc~~ 100 (119)
T 3dl3_A 87 SDDAQFNINFWSDQ 100 (119)
T ss_dssp CTTCEEEEEEEECC
T ss_pred CCCeEEEEEEEECc
Confidence 5677778887655
No 114
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=71.71 E-value=3.8 Score=37.65 Aligned_cols=68 Identities=13% Similarity=0.087 Sum_probs=47.2
Q ss_pred EEEEeCCCCCceeeeccC-CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEE
Q 009311 255 NLWMNNAKSKSSAHYDPH-HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQK 333 (538)
Q Consensus 255 ~lWiG~~gs~T~lH~D~~-~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e 333 (538)
.+=|.+.|+.+..|.++. +-++.++.|+=.++| + ..+
T Consensus 92 ~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl---------------~---------------------------g~~ 129 (166)
T 2vpv_A 92 ILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTV---------------C---------------------------KNK 129 (166)
T ss_dssp EEEECSSGGGCEEEECCSEEEEEEEEESEEEEEE---------------T---------------------------TEE
T ss_pred EEEECCCCCCCCCccCCCceEEEEEEEeEEEEEE---------------C---------------------------CEE
Confidence 344566344445554432 557888999988766 0 125
Q ss_pred EEEcCCCEEecCCCCeEEEeeCCceEEEEEe
Q 009311 334 VILHAGDALFIPEGWFHQVDSDDLTIAVNFW 364 (538)
Q Consensus 334 ~~L~pGD~LfIP~gWWH~V~s~~~sIaVN~w 364 (538)
.+|++||++|||++=-|..+|.+..-+.=+|
T Consensus 130 ~~L~~Gds~~iP~g~~H~~~N~~d~~Arll~ 160 (166)
T 2vpv_A 130 FLSVKGSTFQIPAFNEYAIANRGNDEAKMFF 160 (166)
T ss_dssp EEEETTCEEEECTTCEEEEEECSSSCEEEEE
T ss_pred EEEcCCCEEEECCCCCEEEEECCCCCEEEEE
Confidence 6999999999999999999997665554444
No 115
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=71.63 E-value=3.6 Score=39.50 Aligned_cols=34 Identities=18% Similarity=0.201 Sum_probs=26.6
Q ss_pred EEEEcCCCEEecCCCCeEEEeeC--CceEEEEEeeC
Q 009311 333 KVILHAGDALFIPEGWFHQVDSD--DLTIAVNFWWR 366 (538)
Q Consensus 333 e~~L~pGD~LfIP~gWWH~V~s~--~~sIaVN~w~~ 366 (538)
+.+|+|||+++||++-.|.+.|. +....+.+...
T Consensus 185 ~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~p 220 (243)
T 3h7j_A 185 TVEMKFGTAYFCEPREDHGAINRSEKESKSINIFFP 220 (243)
T ss_dssp EEEECTTCEEEECTTCCEEEEECSSSCEEEEEEEES
T ss_pred EEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEcC
Confidence 57899999999999999999995 34555555443
No 116
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=68.64 E-value=21 Score=33.58 Aligned_cols=77 Identities=16% Similarity=0.200 Sum_probs=55.0
Q ss_pred CCCCceeeeccC-CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEcCC
Q 009311 261 AKSKSSAHYDPH-HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILHAG 339 (538)
Q Consensus 261 ~gs~T~lH~D~~-~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~pG 339 (538)
.|..|++|-... .-+..++.|.=+-..|..... + . . + +. ..-+.++.||
T Consensus 79 PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~---------~--~--~------------~-l~----~~~~~~l~~G 128 (200)
T 3eln_A 79 EGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDK---------K--S--N------------E-MI----KKSERTLREN 128 (200)
T ss_dssp TTCBCCEECCTTCEEEEEEEESCEEEEEECCCCS---------S--C--C------------C-CC----EEEEEEECTT
T ss_pred CCCcCCCccCCCceEEEEEEeeeEEEEEeecCCC---------C--c--c------------c-cc----ccceEEeCCC
Confidence 488999998774 677889999988888753210 0 0 0 0 11 1247899999
Q ss_pred CEEec-CCCCeEEEeeC---CceEEEEEeeCC
Q 009311 340 DALFI-PEGWFHQVDSD---DLTIAVNFWWRS 367 (538)
Q Consensus 340 D~LfI-P~gWWH~V~s~---~~sIaVN~w~~~ 367 (538)
|+.|+ |++=.|+|.|. +.+|++...-..
T Consensus 129 ~v~~~~~~~giH~V~N~s~~~~avSlHvY~pp 160 (200)
T 3eln_A 129 QCAYINDSIGLHRVENVSHTEPAVSLHLYSPP 160 (200)
T ss_dssp CEEEECTTTCEEEEECCCSSCCEEEEEEEESC
T ss_pred CEEEecCCCcEEEEECCCCCCCEEEEEeCCCC
Confidence 99999 87789999994 468888776554
No 117
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=68.62 E-value=5.6 Score=37.39 Aligned_cols=65 Identities=15% Similarity=0.324 Sum_probs=46.6
Q ss_pred eeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEcCCCEEecC
Q 009311 266 SAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILHAGDALFIP 345 (538)
Q Consensus 266 ~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~pGD~LfIP 345 (538)
+.|+-+.+=+..++.|+=.+.+=... ...+++.+++||+|+||
T Consensus 98 ~~H~H~~~Ei~yVleG~G~f~i~d~~-------------------------------------d~~~~i~v~~GDlIiIP 140 (191)
T 1vr3_A 98 EEHLHLDEEIRYILEGSGYFDVRDKE-------------------------------------DKWIRISMEKGDMITLP 140 (191)
T ss_dssp SCEECSSCEEEEEEEEEEEEEEECTT-------------------------------------SCEEEEEEETTEEEEEC
T ss_pred cceECCcceEEEEEeceEEEEECCCC-------------------------------------CeEEEEEECCCCEEEEC
Confidence 56777667788899998777662100 01246899999999999
Q ss_pred CCCeEEEeeCC--ceEEEEEeeCC
Q 009311 346 EGWFHQVDSDD--LTIAVNFWWRS 367 (538)
Q Consensus 346 ~gWWH~V~s~~--~sIaVN~w~~~ 367 (538)
+|=.|...+.+ ...++.++-..
T Consensus 141 aG~~H~f~~~~~~~~~airlF~~~ 164 (191)
T 1vr3_A 141 AGIYHRFTLDEKNYVKAMRLFVGE 164 (191)
T ss_dssp TTCCEEEEECTTCCEEEEEEESSS
T ss_pred cCCcCCcccCCCCCEEEEEEECCC
Confidence 99999988743 35667766554
No 118
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=68.50 E-value=3.2 Score=38.57 Aligned_cols=33 Identities=18% Similarity=0.218 Sum_probs=25.8
Q ss_pred EEEEEcCCCEEecCCCCeEEEeeCC--ceEEEEEe
Q 009311 332 QKVILHAGDALFIPEGWFHQVDSDD--LTIAVNFW 364 (538)
Q Consensus 332 ~e~~L~pGD~LfIP~gWWH~V~s~~--~sIaVN~w 364 (538)
+.+.+++||+|+||+|=+|...+.+ ...++.++
T Consensus 122 ~~~~l~~GDli~IP~g~~H~~~~~~~~~~~~ir~F 156 (179)
T 1zrr_A 122 FQVLCEKNDLISVPAHTPHWFDMGSEPNFTAIRIF 156 (179)
T ss_dssp EEEECCCSCEEEECTTCCBCCCCSSCSSCEEEEEE
T ss_pred EEEEECCCCEEEECCCCeEeeecCCCceEEEEEec
Confidence 4678999999999999999988743 35555554
No 119
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=68.50 E-value=6.2 Score=41.50 Aligned_cols=96 Identities=8% Similarity=0.111 Sum_probs=55.6
Q ss_pred EEEEeCCCCCceeeeccC-CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEE
Q 009311 255 NLWMNNAKSKSSAHYDPH-HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQK 333 (538)
Q Consensus 255 ~lWiG~~gs~T~lH~D~~-~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e 333 (538)
.+=|.+ |+..++||-+. +-|..++.|+=++.++.|.... .. +. ...+. .-.-...-+.... .+.+.
T Consensus 267 r~~l~p-gg~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~~~-----~~-~~-~~~~~----~~~~~~~~~~~~~-~~~~~ 333 (418)
T 3s7i_A 267 CVEIKE-GALMLPHFNSKAMVIVVVNKGTGNLELVAVRKEQ-----QQ-RG-RREEE----EDEDEEEEGSNRE-VRRYT 333 (418)
T ss_dssp EEEECT-TEEEEEEEESSCEEEEEEEECCEEEEEEEEEEC------------------------------CCEE-EEEEE
T ss_pred EEEecC-CceeCceecCCCCEEEEEEeCeEEEEEEeCCCcc-----cc-cc-ccccc----ccccccccccccc-ceEEE
Confidence 344565 67788999875 6799999999999999775320 00 00 00000 0000000000000 02357
Q ss_pred EEEcCCCEEecCCCCeEEEeeCCceEEEEE
Q 009311 334 VILHAGDALFIPEGWFHQVDSDDLTIAVNF 363 (538)
Q Consensus 334 ~~L~pGD~LfIP~gWWH~V~s~~~sIaVN~ 363 (538)
..|++||+++||.|+.|...+.+.-..|.|
T Consensus 334 ~~l~~GDV~vvP~G~~~~~~~~~~l~~v~f 363 (418)
T 3s7i_A 334 ARLKEGDVFIMPAAHPVAINASSELHLLGF 363 (418)
T ss_dssp EEECTTCEEEECTTCCEEEEESSCEEEEEE
T ss_pred eeeCCCCEEEECCCCEEEEECCCCEEEEEE
Confidence 899999999999999999988654333443
No 120
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=67.48 E-value=5.1 Score=36.62 Aligned_cols=25 Identities=12% Similarity=-0.065 Sum_probs=22.3
Q ss_pred EEEEcCCCEEecCCCCeEEEeeCCc
Q 009311 333 KVILHAGDALFIPEGWFHQVDSDDL 357 (538)
Q Consensus 333 e~~L~pGD~LfIP~gWWH~V~s~~~ 357 (538)
+..|+|||++|||++=-|...|.+.
T Consensus 145 ~~~l~~GD~i~i~~~~~H~~~n~~~ 169 (192)
T 1y9q_A 145 WHELQQGEHIRFFSDQPHGYAAVTE 169 (192)
T ss_dssp EEEECTTCEEEEECSSSEEEEESSS
T ss_pred EEEeCCCCEEEEcCCCCeEeECCCC
Confidence 5799999999999999999999543
No 121
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=66.70 E-value=16 Score=37.19 Aligned_cols=63 Identities=17% Similarity=0.123 Sum_probs=44.3
Q ss_pred EeCCCCCce--eeecc-CCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEE
Q 009311 258 MNNAKSKSS--AHYDP-HHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKV 334 (538)
Q Consensus 258 iG~~gs~T~--lH~D~-~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~ 334 (538)
+.+.+...+ .|+.. .+=++.++.|+=++++=... + ...+.
T Consensus 54 ~~p~g~~~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~-----------g--------------------------~~~~~ 96 (350)
T 1juh_A 54 NAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGN-----------E--------------------------TQQTR 96 (350)
T ss_dssp EECCCSSCSSCCEECSSCEEEEEEEESEEEEEEEETT-----------S--------------------------CCEEE
T ss_pred EcCCCCCCCCccccCCCceEEEEEEEEEEEEEECCcC-----------C--------------------------ceEEE
Confidence 455555555 78776 45677789999877662100 0 01357
Q ss_pred EEcCCCEEecCCCCeEEEeeCCc
Q 009311 335 ILHAGDALFIPEGWFHQVDSDDL 357 (538)
Q Consensus 335 ~L~pGD~LfIP~gWWH~V~s~~~ 357 (538)
+|+|||++|||++-.|...|.+.
T Consensus 97 ~L~~GD~v~ip~g~~H~~~n~~~ 119 (350)
T 1juh_A 97 VLSSGDYGSVPRNVTHTFQIQDP 119 (350)
T ss_dssp EEETTCEEEECTTEEEEEEECST
T ss_pred EECCCCEEEECCCCcEEEEeCCC
Confidence 99999999999999999999543
No 122
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=66.15 E-value=5 Score=38.94 Aligned_cols=84 Identities=11% Similarity=0.186 Sum_probs=50.6
Q ss_pred CCCCCceeeeccC-CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEcC
Q 009311 260 NAKSKSSAHYDPH-HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILHA 338 (538)
Q Consensus 260 ~~gs~T~lH~D~~-~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~p 338 (538)
+.|...+.|+.+. +=++.++.|+=++.+ +-.+.+.+-..+..+ +.-. .......++|
T Consensus 51 ~PG~~~~~H~H~~~~E~~yVLeG~~~~~v-~~~~~~~~~~~~~~~------------------~~~~---~~~~~~~l~~ 108 (239)
T 2xlg_A 51 PPGGGPMPHIHYFINEWFWTPEGGIELFH-STKQYPNMDELPVVG------------------GAGR---GDLYSIQSEP 108 (239)
T ss_dssp CTTCSCCSEEESSEEEEEEETTCCCEEEE-EEEECCCTTSCCSTT------------------TTCC---EEEEEEECCT
T ss_pred CCCCcCCCeECCCccEEEEEEEeEEEEEE-EecccccCCCccccc------------------cccc---CceeEEEECC
Confidence 4467788998874 558888999888766 211111110000000 0000 1134689999
Q ss_pred CCEEecCCCCeEEEeeCC-ceEEE-EEee
Q 009311 339 GDALFIPEGWFHQVDSDD-LTIAV-NFWW 365 (538)
Q Consensus 339 GD~LfIP~gWWH~V~s~~-~sIaV-N~w~ 365 (538)
||++|||+|-.|...|.+ ...-+ -.|+
T Consensus 109 GD~i~iP~g~~H~~~N~~~~~~~~~l~~~ 137 (239)
T 2xlg_A 109 KQLIYSPNHYMHGFVNPTDKTLPIVFVWM 137 (239)
T ss_dssp TEEEEECTTEEEEEECCSSSCEEEEEEEE
T ss_pred CCEEEECCCCCEEEEeCCCCCEEEEEEEE
Confidence 999999999999999943 33334 4555
No 123
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=66.13 E-value=18 Score=38.58 Aligned_cols=93 Identities=13% Similarity=0.145 Sum_probs=55.8
Q ss_pred EEEEeCCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEE
Q 009311 255 NLWMNNAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKV 334 (538)
Q Consensus 255 ~lWiG~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~ 334 (538)
.+=|.+ ++....||-+..-++.++.|+=.+.+.-|... ..|-.+..+. ..+. -.+ .++. +-...
T Consensus 52 r~~l~P-ggl~~Ph~~~a~ei~yV~~G~g~~g~v~pg~~-et~~~~~~~~--~~~~-------~~~---~~d~--~qk~~ 115 (476)
T 1fxz_A 52 RCTLNR-NALRRPSYTNGPQEIYIQQGKGIFGMIYPGCP-STFEEPQQPQ--QRGQ-------SSR---PQDR--HQKIY 115 (476)
T ss_dssp EEEECT-TEEEEEEEESSCEEEEEEECCEEEEEECTTCC-CC------------------------------C--CCCEE
T ss_pred EEEEcC-CCEecceecCCceEEEEEecEEEEEEEcCCCc-chhhcccccc--cccc-------ccc---cccc--cceEE
Confidence 444666 66777788667779999999999999988632 2232111000 0000 000 1111 11357
Q ss_pred EEcCCCEEecCCCCeEEEeeCC--ceEEEEE
Q 009311 335 ILHAGDALFIPEGWFHQVDSDD--LTIAVNF 363 (538)
Q Consensus 335 ~L~pGD~LfIP~gWWH~V~s~~--~sIaVN~ 363 (538)
.|++||+++||+|--|...|.+ .-++|..
T Consensus 116 ~l~~GDvi~iPaG~~h~~~N~G~~~l~~i~~ 146 (476)
T 1fxz_A 116 NFREGDLIAVPTGVAWWMYNNEDTPVVAVSI 146 (476)
T ss_dssp EECTTEEEEECTTCEEEEEECSSSCEEEEEE
T ss_pred EEeCCCEEEECCCCcEEEEeCCCCCEEEEEE
Confidence 8999999999999999999954 3444443
No 124
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=63.45 E-value=16 Score=39.32 Aligned_cols=96 Identities=17% Similarity=0.205 Sum_probs=56.2
Q ss_pred EEEEeCCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEE
Q 009311 255 NLWMNNAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKV 334 (538)
Q Consensus 255 ~lWiG~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~ 334 (538)
.+=|-+ |+....||-+..-++.++.|+=.+.+.-|.... -|..+.. .....+.- .-.. .++. +-...
T Consensus 49 r~~i~p-ggl~~Ph~~~~~~i~yV~~G~g~vg~v~pgc~e-t~~~~~~-~~~~~~~~-----~~~~---~~d~--~qkv~ 115 (493)
T 2d5f_A 49 KRTLNR-NGLHLPSYSPYPQMIIVVQGKGAIGFAFPGCPE-TFEKPQQ-QSSRRGSR-----SQQQ---LQDS--HQKIR 115 (493)
T ss_dssp EEEECT-TEEEEEEECSSCEEEEEEECEEEEEECCTTCCC-CEEECC----------------------CSEE--ESCEE
T ss_pred EEEeCC-CcEeCceecCCCeEEEEEeCEEEEEEEeCCCcc-ccccccc-cccccccc-----cccc---cccc--cceEE
Confidence 344666 667788887777899999999999999876531 1211100 00000000 0000 0010 01235
Q ss_pred EEcCCCEEecCCCCeEEEeeCC--ceEEEEE
Q 009311 335 ILHAGDALFIPEGWFHQVDSDD--LTIAVNF 363 (538)
Q Consensus 335 ~L~pGD~LfIP~gWWH~V~s~~--~sIaVN~ 363 (538)
.|++||+++||+|--|...|.+ .-++|.+
T Consensus 116 ~l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~ 146 (493)
T 2d5f_A 116 HFNEGDVLVIPPGVPYWTYNTGDEPVVAISL 146 (493)
T ss_dssp EEETTEEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred EecCCCEEEECCCCcEEEEeCCCCCEEEEEE
Confidence 8999999999999999999954 3444443
No 125
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=61.68 E-value=30 Score=32.66 Aligned_cols=36 Identities=22% Similarity=0.417 Sum_probs=26.0
Q ss_pred EEEEEcCCCEEecCCCCeEEEee---CCc--eEEEEEeeCC
Q 009311 332 QKVILHAGDALFIPEGWFHQVDS---DDL--TIAVNFWWRS 367 (538)
Q Consensus 332 ~e~~L~pGD~LfIP~gWWH~V~s---~~~--sIaVN~w~~~ 367 (538)
..+.-++|++++.|+.-+|.|.. .+. |||.|+.+..
T Consensus 169 ~~i~P~~G~lvlFpS~l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 169 RSVAPKVGDVLLWESWLRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp EEECCCTTEEEEEETTSCEEECCCCSSSCEEEEEEEEEC--
T ss_pred eEecCCCCeEEEECCCCEEeccCCCCCCCEEEEEEEeecCC
Confidence 36777999999999999999997 234 5555555443
No 126
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=61.67 E-value=5.4 Score=38.63 Aligned_cols=25 Identities=12% Similarity=0.053 Sum_probs=21.6
Q ss_pred EEEEcCCCEEecCCCCeEEEeeCCc
Q 009311 333 KVILHAGDALFIPEGWFHQVDSDDL 357 (538)
Q Consensus 333 e~~L~pGD~LfIP~gWWH~V~s~~~ 357 (538)
...|++||++|||++-.|...|.+.
T Consensus 219 ~~~l~~GD~i~~~~~~~H~~~n~g~ 243 (261)
T 1rc6_A 219 WIPVKKGDYIFMGAYSLQAGYGVGR 243 (261)
T ss_dssp EEEEETTCEEEECSSEEEEEEEC--
T ss_pred EEEeCCCCEEEECCCCcEEeEeCCC
Confidence 5799999999999999999999644
No 127
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=61.38 E-value=19 Score=38.21 Aligned_cols=91 Identities=14% Similarity=0.156 Sum_probs=56.3
Q ss_pred EEEEeCCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEE
Q 009311 255 NLWMNNAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKV 334 (538)
Q Consensus 255 ~lWiG~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~ 334 (538)
.+=|.+ |+....||-...-++.++.|+=.+.++-|... ..|-.+. .....+. .+ .++. +-...
T Consensus 67 r~~i~p-ggl~~Ph~h~a~ei~yVl~G~g~vg~v~p~~~-~tf~~~~--~~~~~~~--------~~---~~d~--~q~~~ 129 (459)
T 2e9q_A 67 RHTIRP-KGLLLPGFSNAPKLIFVAQGFGIRGIAIPGCA-ETYQTDL--RRSQSAG--------SA---FKDQ--HQKIR 129 (459)
T ss_dssp EEEECT-TEEEEEEEESSCEEEEEEECEEEEEECCTTCC-CCEEECC--C---------------C---CCEE--ECCCE
T ss_pred EEEEcC-CCEecceecCCceEEEEEeeEEEEEEEeCCCc-chhccch--hhccccc--------cc---cccc--cceeE
Confidence 344666 66778888766779999999999999987642 3332111 0000000 00 1111 11245
Q ss_pred EEcCCCEEecCCCCeEEEeeCC--ceEEEE
Q 009311 335 ILHAGDALFIPEGWFHQVDSDD--LTIAVN 362 (538)
Q Consensus 335 ~L~pGD~LfIP~gWWH~V~s~~--~sIaVN 362 (538)
.|++||+++||+|--|...|.+ .-++|.
T Consensus 130 ~l~~GDv~~iPaG~~H~~~N~g~~~l~~l~ 159 (459)
T 2e9q_A 130 PFREGDLLVVPAGVSHWMYNRGQSDLVLIV 159 (459)
T ss_dssp EEETTEEEEECTTCCEEEEECSSSCEEEEE
T ss_pred EecCCCEEEECCCCCEEEEeCCCCCEEEEE
Confidence 8999999999999999999954 344443
No 128
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=61.32 E-value=9.3 Score=40.78 Aligned_cols=38 Identities=11% Similarity=0.066 Sum_probs=29.7
Q ss_pred EEEEeCCCCCceeeeccCCceeEEEEeEEEEEEeCCCCC
Q 009311 255 NLWMNNAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAAS 293 (538)
Q Consensus 255 ~lWiG~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~ 293 (538)
.+=|.+ ++..+.||-+..-++.++.|+=.+-++.|...
T Consensus 47 r~~i~p-~Gl~lPh~~~a~e~~~V~~G~g~~G~v~pgc~ 84 (466)
T 3kgl_A 47 RYIIES-KGLYLPSFFSTAKLSFVAKGEGLMGRVVPGCA 84 (466)
T ss_dssp EEEECT-TEEEEEEEESSCEEEEEEECEEEEEEECTTCC
T ss_pred EEEECC-CCEeCCeeCCCCeEEEEEeCeEEEEEecCCCc
Confidence 344566 66677777777889999999999999999754
No 129
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=61.23 E-value=24 Score=35.03 Aligned_cols=69 Identities=12% Similarity=0.288 Sum_probs=54.3
Q ss_pred EEEEeCCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEE
Q 009311 255 NLWMNNAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKV 334 (538)
Q Consensus 255 ~lWiG~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~ 334 (538)
-+-+|+...++..|+|..+=++.|+.|.=..-+... | ....+
T Consensus 34 V~~vgGpN~R~d~H~~~~dE~FyqlkG~m~l~~~d~------------g--------------------------~~~~V 75 (286)
T 2qnk_A 34 VMFIGGPNTRKDYHIEEGEEVFYQLEGDMVLRVLEQ------------G--------------------------KHRDV 75 (286)
T ss_dssp EEEECSCBCCCCEEECSSCEEEEEEESCEEEEEEET------------T--------------------------EEEEE
T ss_pred EEEEeCCCcCccCcCCCCCeEEEEEeCeEEEEEEeC------------C--------------------------ceeeE
Confidence 355788899999999999999999999877665421 0 02468
Q ss_pred EEcCCCEEecCCCCeEEEeeCCceEEE
Q 009311 335 ILHAGDALFIPEGWFHQVDSDDLTIAV 361 (538)
Q Consensus 335 ~L~pGD~LfIP~gWWH~V~s~~~sIaV 361 (538)
.+++||+..+|+|--|.-.....++.+
T Consensus 76 ~i~eGemfllP~gv~HsP~r~~et~gL 102 (286)
T 2qnk_A 76 VIRQGEIFLLPARVPHSPQRFANTVGL 102 (286)
T ss_dssp EECTTEEEEECTTCCEEEEECTTCEEE
T ss_pred EECCCeEEEeCCCCCcCCcccCCeEEE
Confidence 999999999999999999875555544
No 130
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=61.02 E-value=29 Score=37.00 Aligned_cols=106 Identities=15% Similarity=0.088 Sum_probs=59.3
Q ss_pred EEEEeCCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCc-ccCCCCCCC---CCCCCcccccCCc
Q 009311 255 NLWMNNAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNH-SSISLENPD---FSIYPRAEHSGEY 330 (538)
Q Consensus 255 ~lWiG~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~-S~Vd~~~pD---~~kyP~f~~a~~~ 330 (538)
.+=|.+ +.....||-...-+..++.|+=.+.++-|.. +..|..+.- ..... +.-.-.... -..--++++. +
T Consensus 54 R~~i~P-~gl~~Ph~h~a~ei~yV~qG~g~~g~v~pgc-~etf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~--h 128 (465)
T 3qac_A 54 RRTIEP-HGLLLPSFTSAPELIYIEQGNGITGMMIPGC-PETYESGSQ-QFQGGEDERIREQGSRKFGMRGDRFQDQ--H 128 (465)
T ss_dssp EEEECT-TEEEEEEEESSCEEEEEEECEEEEEEECTTC-CCCC-------------------------------CCC--C
T ss_pred EEEEcC-CcCcccEEcCCCEEEEEEECcEEEEEecCCC-Cceeecchh-cccccccccccccccccccccccccccc--c
Confidence 344666 6778888886678999999999999998864 445521100 00000 000000000 0000012222 1
Q ss_pred cEEEEEcCCCEEecCCCCeEEEeeC--CceEEEEEee
Q 009311 331 SQKVILHAGDALFIPEGWFHQVDSD--DLTIAVNFWW 365 (538)
Q Consensus 331 ~~e~~L~pGD~LfIP~gWWH~V~s~--~~sIaVN~w~ 365 (538)
--...+++||+++||+|--|...|. +.-++|...-
T Consensus 129 qk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d 165 (465)
T 3qac_A 129 QKIRHLREGDIFAMPAGVSHWAYNNGDQPLVAVILID 165 (465)
T ss_dssp CCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEEC
T ss_pred cceeeecCCCEEEECCCCeEEEEcCCCCCEEEEEEEc
Confidence 2357999999999999999999994 3455665543
No 131
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=60.69 E-value=6.7 Score=38.69 Aligned_cols=25 Identities=24% Similarity=0.250 Sum_probs=22.3
Q ss_pred EEEEcCCCEEecCCCCeEEEeeCCc
Q 009311 333 KVILHAGDALFIPEGWFHQVDSDDL 357 (538)
Q Consensus 333 e~~L~pGD~LfIP~gWWH~V~s~~~ 357 (538)
+.+|++||++|||++-.|...|.+.
T Consensus 109 ~~~L~~GD~i~ip~~~~H~~~N~g~ 133 (278)
T 1sq4_A 109 VHAMQPGGYAFIPPGADYKVRNTTG 133 (278)
T ss_dssp EEEECTTEEEEECTTCCEEEECCSS
T ss_pred EEEECCCCEEEECCCCcEEEEECCC
Confidence 5799999999999999999999543
No 132
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=60.31 E-value=36 Score=33.01 Aligned_cols=25 Identities=12% Similarity=0.008 Sum_probs=22.3
Q ss_pred EEEEcCCCEEecCCCCeEEEeeCCc
Q 009311 333 KVILHAGDALFIPEGWFHQVDSDDL 357 (538)
Q Consensus 333 e~~L~pGD~LfIP~gWWH~V~s~~~ 357 (538)
...|++||++|||++-.|...|.+.
T Consensus 222 ~~~l~~GD~i~i~~~~~H~~~n~~~ 246 (274)
T 1sef_A 222 WYPVEKGDYIFMSAYVPQAAYAVGR 246 (274)
T ss_dssp EEEEETTCEEEECTTCCEEEEEECS
T ss_pred EEEECCCCEEEECCCCCEEEEeCCC
Confidence 5799999999999999999999543
No 133
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=60.02 E-value=11 Score=39.57 Aligned_cols=60 Identities=22% Similarity=0.263 Sum_probs=43.8
Q ss_pred EEEeCCCCCceeee-ccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEE
Q 009311 256 LWMNNAKSKSSAHY-DPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKV 334 (538)
Q Consensus 256 lWiG~~gs~T~lH~-D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~ 334 (538)
+=|.+ ++..+.|+ | -+-++.++.|+=.+.++.|.. ....
T Consensus 49 ~~l~p-~gl~~Phh~~-A~ei~yV~~G~g~~g~V~~~~--------------------------------------~~~~ 88 (418)
T 3s7i_A 49 IEAKP-NTLVLPKHAD-ADNILVIQQGQATVTVANGNN--------------------------------------RKSF 88 (418)
T ss_dssp EEECT-TEEEEEEEES-EEEEEEEEESEEEEEEECSSC--------------------------------------EEEE
T ss_pred EEecC-CceeeeeeCC-CCeEEEEEEeeEEEEEEecCC--------------------------------------EEEE
Confidence 44666 45555553 3 245688999998888876531 1246
Q ss_pred EEcCCCEEecCCCCeEEEeeC
Q 009311 335 ILHAGDALFIPEGWFHQVDSD 355 (538)
Q Consensus 335 ~L~pGD~LfIP~gWWH~V~s~ 355 (538)
.|++||+++||+|.-|.+.|.
T Consensus 89 ~l~~GDv~~~P~G~~h~~~N~ 109 (418)
T 3s7i_A 89 NLDEGHALRIPSGFISYILNR 109 (418)
T ss_dssp EEETTEEEEECTTCEEEEEEC
T ss_pred EecCCCEEEECCCCeEEEEec
Confidence 899999999999999999994
No 134
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=58.07 E-value=4.8 Score=36.70 Aligned_cols=22 Identities=23% Similarity=0.043 Sum_probs=20.2
Q ss_pred EEEEcCCCEEecCCCCeEEEee
Q 009311 333 KVILHAGDALFIPEGWFHQVDS 354 (538)
Q Consensus 333 e~~L~pGD~LfIP~gWWH~V~s 354 (538)
...|+|||+++||+|=.|++.+
T Consensus 87 ~~~l~~GD~v~IPpg~~H~i~g 108 (157)
T 4h7l_A 87 SYPLTKLLAISIPPLVRHRIVG 108 (157)
T ss_dssp EEECCTTEEEEECTTCCEEEES
T ss_pred EEEeCCCCEEEECCCCeEeeEC
Confidence 4689999999999999999985
No 135
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=58.01 E-value=7.2 Score=37.76 Aligned_cols=34 Identities=18% Similarity=0.299 Sum_probs=26.2
Q ss_pred EEEEcCCCEEecCCCCeEEEeeCCceEEEEEeeC
Q 009311 333 KVILHAGDALFIPEGWFHQVDSDDLTIAVNFWWR 366 (538)
Q Consensus 333 e~~L~pGD~LfIP~gWWH~V~s~~~sIaVN~w~~ 366 (538)
+.+|+|||++|+|++--|...|.+..-+.=+|..
T Consensus 100 ~~~L~~Gd~~~~~~~~~H~~~N~~~~~~~~l~v~ 133 (261)
T 1rc6_A 100 TFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLYK 133 (261)
T ss_dssp EEEEETTEEEEECTTCCCEEEECSSSCEEEEEEE
T ss_pred EEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEE
Confidence 5799999999999999999999654434333433
No 136
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=57.08 E-value=7.3 Score=37.54 Aligned_cols=36 Identities=8% Similarity=0.078 Sum_probs=28.2
Q ss_pred EEEEEcCCCEEecCCCCeEEEeeCCceEEEEEeeCC
Q 009311 332 QKVILHAGDALFIPEGWFHQVDSDDLTIAVNFWWRS 367 (538)
Q Consensus 332 ~e~~L~pGD~LfIP~gWWH~V~s~~~sIaVN~w~~~ 367 (538)
....|+|||+||++++--|+..|.+..-+.=.+++.
T Consensus 204 ~~~~l~~GD~~~~~~~~pH~~~n~g~~~~~yl~~kd 239 (246)
T 1sfn_A 204 NYYPVTAGDIIWMGAHCPQWYGALGRNWSKYLLYKD 239 (246)
T ss_dssp EEEEEETTCEEEECTTCCEEEEEESSSCEEEEEEEE
T ss_pred EEEEcCCCCEEEECCCCCEEEEcCCCCCEEEEEEEe
Confidence 367999999999999999999996554445555554
No 137
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=55.64 E-value=8.3 Score=37.66 Aligned_cols=34 Identities=12% Similarity=0.097 Sum_probs=26.4
Q ss_pred EEEEcCCCEEecCCCCeEEEeeCCceEEEEEeeC
Q 009311 333 KVILHAGDALFIPEGWFHQVDSDDLTIAVNFWWR 366 (538)
Q Consensus 333 e~~L~pGD~LfIP~gWWH~V~s~~~sIaVN~w~~ 366 (538)
+.+|+|||++|+|++--|...|.+...+.=+|..
T Consensus 103 ~~~L~~GD~~~~~~~~~H~~~N~~~~~~~~l~v~ 136 (274)
T 1sef_A 103 THELEAGGYAYFTPEMKMYLANAQEADTEVFLYK 136 (274)
T ss_dssp EEEEETTEEEEECTTSCCEEEESSSSCEEEEEEE
T ss_pred EEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEE
Confidence 5799999999999999999999654444334433
No 138
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=53.22 E-value=8.2 Score=34.48 Aligned_cols=65 Identities=8% Similarity=0.088 Sum_probs=43.0
Q ss_pred CCceeeeccC-CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEcCCCE
Q 009311 263 SKSSAHYDPH-HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILHAGDA 341 (538)
Q Consensus 263 s~T~lH~D~~-~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~pGD~ 341 (538)
....+|.... +=++.++.|+=+..+-.... + .+. -..+.|+|||+
T Consensus 40 ~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~----------~-------------------~~~-----d~~V~l~~Ge~ 85 (140)
T 3d0j_A 40 GIAHLEIHHSTDEQFILSAGKAILITAEKEN----------D-------------------KFN-----IELTLMEKGKV 85 (140)
T ss_dssp TCCEEEEESSCCEEEEEEESCEEEEEEEEET----------T-------------------EEE-----EEEEECCTTCC
T ss_pred cCHhhccCCCCCeEEEEEecEEEEEEecCcC----------C-------------------CCc-----cceEEecCCCE
Confidence 3556676554 66888999987766532100 0 000 13589999999
Q ss_pred EecCCCCeEEEeeCCceEEE
Q 009311 342 LFIPEGWFHQVDSDDLTIAV 361 (538)
Q Consensus 342 LfIP~gWWH~V~s~~~sIaV 361 (538)
..||.|-||.......+-.+
T Consensus 86 yvVPkGveH~p~a~~e~~vL 105 (140)
T 3d0j_A 86 YNVPAECWFYSITQKDTKMM 105 (140)
T ss_dssp EEECTTCEEEEEECTTCEEE
T ss_pred EEeCCCccCcccCCCceEEE
Confidence 99999999999985544333
No 139
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=51.94 E-value=6 Score=34.18 Aligned_cols=21 Identities=19% Similarity=0.287 Sum_probs=17.0
Q ss_pred EEEcCCCEEecCCCCeEEEee
Q 009311 334 VILHAGDALFIPEGWFHQVDS 354 (538)
Q Consensus 334 ~~L~pGD~LfIP~gWWH~V~s 354 (538)
..++|||++++|+||-..-+.
T Consensus 82 ~~l~aGD~~~~P~G~~gtWev 102 (116)
T 3es4_A 82 VKIGPGSIVSIAKGVPSRLEI 102 (116)
T ss_dssp EEECTTEEEEECTTCCEEEEE
T ss_pred EEECCCCEEEECCCCeEEEEE
Confidence 689999999999999544433
No 140
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=50.89 E-value=22 Score=30.69 Aligned_cols=35 Identities=20% Similarity=0.363 Sum_probs=25.7
Q ss_pred EEEEcCCCEEecCCCCeEEEeeCC--c-eEEEEEeeCC
Q 009311 333 KVILHAGDALFIPEGWFHQVDSDD--L-TIAVNFWWRS 367 (538)
Q Consensus 333 e~~L~pGD~LfIP~gWWH~V~s~~--~-sIaVN~w~~~ 367 (538)
+..+++||+++||+|-.|...+.+ . ...+.+.|..
T Consensus 57 ~~~l~~Gd~~~i~p~~~H~~~~~~~~~~~~~~~i~f~~ 94 (164)
T 2arc_A 57 EFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFRP 94 (164)
T ss_dssp EEEECTTCEEEECTTCCEEEEECTTSSEEEEEEEEECC
T ss_pred EEEecCCeEEEEcCCCCEEEEeCCCCCcEEEEEEEECC
Confidence 578999999999999999988743 2 3334444444
No 141
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=50.30 E-value=38 Score=36.49 Aligned_cols=102 Identities=19% Similarity=0.206 Sum_probs=57.3
Q ss_pred eEEEEeCCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCc--c---cCCCCCCCCCCCCcccccC
Q 009311 254 INLWMNNAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNH--S---SISLENPDFSIYPRAEHSG 328 (538)
Q Consensus 254 ~~lWiG~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~--S---~Vd~~~pD~~kyP~f~~a~ 328 (538)
..+=|.+ ++....||-...-++.++.|+=.+.+.-|... .-|..+.- .++. + .=..++-+-.+ +.++.
T Consensus 51 ~r~~i~p-~gl~lPh~~~a~~~~yV~~G~g~~g~v~pg~~-et~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~d~- 123 (510)
T 3c3v_A 51 SRLVLRR-NALRRPFYSNAPQEIFIQQGRGYFGLIFPGCP-STYEEPAQ--QGRRYQSQRPPRRLQEEDQSQ--QQQDS- 123 (510)
T ss_dssp EEEEECT-TEEEEEEECSSCEEEEEEECCEEEEEECTTCC-CCEEEECC--C----------------------CEEEE-
T ss_pred EEEEECC-CCCccceecCCCeEEEEEeCEEEEEEEeCCCc-cccccccc--ccccccccccccccccccccc--ccccc-
Confidence 3444666 56777888666779999999999999988642 22221100 0000 0 00000000000 01111
Q ss_pred CccEEEEEcCCCEEecCCCCeEEEeeCC--ceEEEEE
Q 009311 329 EYSQKVILHAGDALFIPEGWFHQVDSDD--LTIAVNF 363 (538)
Q Consensus 329 ~~~~e~~L~pGD~LfIP~gWWH~V~s~~--~sIaVN~ 363 (538)
+.....|++||+++||+|--|...|.+ .-++|..
T Consensus 124 -~qkv~~v~~GDvi~iPaG~~hw~~N~g~~~l~~v~~ 159 (510)
T 3c3v_A 124 -HQKVHRFNEGDLIAVPTGVAFWLYNDHDTDVVAVSL 159 (510)
T ss_dssp -ESCCEEECTTEEEEECTTCEEEEEECSSSCEEEEEE
T ss_pred -cceEEEecCCCEEEECCCCCEEEEeCCCCCEEEEEE
Confidence 112368999999999999999999954 3444443
No 142
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=48.58 E-value=17 Score=37.81 Aligned_cols=64 Identities=17% Similarity=0.226 Sum_probs=47.9
Q ss_pred eEEEEeCCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEE
Q 009311 254 INLWMNNAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQK 333 (538)
Q Consensus 254 ~~lWiG~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e 333 (538)
..+=+.+ |+....|+-..+-|+.++.|+=++.++.|.. ..+
T Consensus 55 ~~~~l~p-gg~~~ph~~~a~ei~yVl~G~~~v~~v~~~~--------------------------------------~~~ 95 (397)
T 2phl_A 55 VEFRSKP-ETLLLPQQADAELLLVVRSGSAILVLVKPDD--------------------------------------RRE 95 (397)
T ss_dssp EEEEECS-SEEEEEEEESEEEEEEEEESEEEEEEEETTT--------------------------------------EEE
T ss_pred EEEEECC-CcCccCEecCCCeEEEEEeeeEEEEEEeCCC--------------------------------------cEE
Confidence 4455677 4555666644467899999999999876531 013
Q ss_pred EEEcCCCE------EecCCCCeEEEeeCC
Q 009311 334 VILHAGDA------LFIPEGWFHQVDSDD 356 (538)
Q Consensus 334 ~~L~pGD~------LfIP~gWWH~V~s~~ 356 (538)
..|++||+ ++||+|--|...|.+
T Consensus 96 ~~l~~GDv~~~~~~~~iP~G~~h~~~N~g 124 (397)
T 2phl_A 96 YFFLTSDNPIFSDHQKIPAGTIFYLVNPD 124 (397)
T ss_dssp EEEEESSCTTSCSEEEECTTCEEEEEECC
T ss_pred EEECCCCcccccceEEECCCCcEEEEeCC
Confidence 58999999 999999999999844
No 143
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=47.62 E-value=13 Score=34.25 Aligned_cols=60 Identities=15% Similarity=0.106 Sum_probs=42.0
Q ss_pred EeCCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEEc
Q 009311 258 MNNAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVILH 337 (538)
Q Consensus 258 iG~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L~ 337 (538)
|-+ |..+++|.....-+..++.|+=.+.+= . ..+.+|+
T Consensus 86 l~P-G~~~~~H~H~~eE~~~VLeGel~l~ld-------------------------------------~----ge~~~L~ 123 (172)
T 3es1_A 86 MLP-GKESPMHRTNSIDYGIVLEGEIELELD-------------------------------------D----GAKRTVR 123 (172)
T ss_dssp ECT-TCBCCCBCCSEEEEEEEEESCEEEECG-------------------------------------G----GCEEEEC
T ss_pred ECC-CCCCCCeecCceEEEEEEeCEEEEEEC-------------------------------------C----CeEEEEC
Confidence 444 667888876655566777777665430 0 0246899
Q ss_pred CCCEEecCCCCeEEEeeCCceEE
Q 009311 338 AGDALFIPEGWFHQVDSDDLTIA 360 (538)
Q Consensus 338 pGD~LfIP~gWWH~V~s~~~sIa 360 (538)
+||++ +|++-.|...|.+..-+
T Consensus 124 ~GDsi-~~~g~~H~~~N~g~~~a 145 (172)
T 3es1_A 124 QGGII-VQRGTNHLWRNTTDKPC 145 (172)
T ss_dssp TTCEE-EECSCCBEEECCSSSCE
T ss_pred CCCEE-EeCCCcEEEEeCCCCCE
Confidence 99999 99999999999644333
No 144
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=47.33 E-value=65 Score=31.22 Aligned_cols=86 Identities=13% Similarity=0.235 Sum_probs=55.4
Q ss_pred EEEeCCCCCceeeeccC--CceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEE
Q 009311 256 LWMNNAKSKSSAHYDPH--HNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQK 333 (538)
Q Consensus 256 lWiG~~gs~T~lH~D~~--~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e 333 (538)
+-|-..+..+|+|+... +-+.|---|.=.+.||-......+-..++ .|. +|-.+ +... ..-+
T Consensus 110 ~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v--------~V~---~DG~~----~~~~-aG~~ 173 (246)
T 3kmh_A 110 IMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDI--------TVV---IDGCR----QKHT-AGSQ 173 (246)
T ss_dssp EEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCE--------EEE---ETTEE----EEEC-TTCE
T ss_pred EeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCe--------EEe---cCCeE----EEeC-CCCE
Confidence 34555689999999986 67777777788888887654322211110 111 11111 1111 1357
Q ss_pred EEEcCCCEEecCCCCeEEEeeCCc
Q 009311 334 VILHAGDALFIPEGWFHQVDSDDL 357 (538)
Q Consensus 334 ~~L~pGD~LfIP~gWWH~V~s~~~ 357 (538)
++|.||+-+-||+|-||.....+.
T Consensus 174 i~L~PGESiTl~Pg~~H~F~ae~g 197 (246)
T 3kmh_A 174 LRLSPGESICLPPGLYHSFWAEAG 197 (246)
T ss_dssp EEECTTCEEEECTTEEEEEEECTT
T ss_pred EEECCCCeEecCCCCEEEEEecCC
Confidence 899999999999999999998543
No 145
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=46.97 E-value=59 Score=34.84 Aligned_cols=90 Identities=16% Similarity=0.152 Sum_probs=53.6
Q ss_pred EEEeCCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEE
Q 009311 256 LWMNNAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVI 335 (538)
Q Consensus 256 lWiG~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~ 335 (538)
+=|.+ ++....||-...-++.++.|+=.+-++-|... ..|-.+.. ...+. -. ++++.. --...
T Consensus 51 ~~i~p-ggl~lPh~~~A~ei~~V~qG~g~~G~v~p~~~-e~f~~~~~---~~~~~-------~~---~~~d~~--qk~~~ 113 (496)
T 3ksc_A 51 ATLQR-NALRRPYYSNAPQEIFIQQGNGYFGMVFPGCP-ETFEEPQE---SEQGE-------GR---RYRDRH--QKVNR 113 (496)
T ss_dssp EEECT-TEEEEEEEESSCEEEEEEECCEEEEEECTTCC-CC----------------------------CCCC--CCEEE
T ss_pred EEecC-CCEeCceEcCCCEEEEEEeCceEEEEEeCCCC-ccchhhhh---ccccc-------cc---ccccch--heeec
Confidence 34555 66677777755678999999999999988642 33321100 00000 00 112211 12349
Q ss_pred EcCCCEEecCCCCeEEEeeCC--ceEEEE
Q 009311 336 LHAGDALFIPEGWFHQVDSDD--LTIAVN 362 (538)
Q Consensus 336 L~pGD~LfIP~gWWH~V~s~~--~sIaVN 362 (538)
|++||++.||+|--|...|.+ .-++|.
T Consensus 114 l~~GDV~viPaG~~h~~~N~G~~~lv~v~ 142 (496)
T 3ksc_A 114 FREGDIIAVPTGIVFWMYNDQDTPVIAVS 142 (496)
T ss_dssp ECTTEEEEECTTCEEEEEECSSSCEEEEE
T ss_pred cCCCCEEEECCCCcEEEEcCCCCCEEEEE
Confidence 999999999999999999954 344444
No 146
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=44.47 E-value=22 Score=34.42 Aligned_cols=38 Identities=29% Similarity=0.486 Sum_probs=32.8
Q ss_pred EEEEEcCCCEEecCCCCeEEEee--CCceEEEEEeeCCcc
Q 009311 332 QKVILHAGDALFIPEGWFHQVDS--DDLTIAVNFWWRSSI 369 (538)
Q Consensus 332 ~e~~L~pGD~LfIP~gWWH~V~s--~~~sIaVN~w~~~~~ 369 (538)
..+..++|++|+.|+...|.|.. .+.-.+++.|+.+..
T Consensus 158 ~~V~P~~G~~v~F~s~~lH~v~pV~~G~R~~~~~Wi~s~v 197 (243)
T 3dkq_A 158 QSIKLSAGSLVLYPSSSLHQVTPVLSGERTAAFMWLQSMV 197 (243)
T ss_dssp EEECCCTTCEEEEETTSEEEECCEEEECEEEEEEEEEESC
T ss_pred EEEecCCCEEEEECCCCeEcCccccccCEEEEEEehhhcc
Confidence 45778899999999999999987 467889999999853
No 147
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=42.29 E-value=14 Score=37.29 Aligned_cols=23 Identities=22% Similarity=0.631 Sum_probs=20.9
Q ss_pred EEEEEcCCCEEecCCCCeEEEee
Q 009311 332 QKVILHAGDALFIPEGWFHQVDS 354 (538)
Q Consensus 332 ~e~~L~pGD~LfIP~gWWH~V~s 354 (538)
-.+.|+|||++|||+|=-|...+
T Consensus 158 n~v~l~pGd~~~ipaGt~HA~~~ 180 (319)
T 1qwr_A 158 RRIKIKPGDFYYVPSGTLHALCK 180 (319)
T ss_dssp EEEECCTTCEEEECTTCCEEECS
T ss_pred eEEEcCCCCEEEcCCCCceEecC
Confidence 46899999999999999999865
No 148
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=41.87 E-value=15 Score=36.12 Aligned_cols=24 Identities=13% Similarity=0.016 Sum_probs=22.0
Q ss_pred EEEEcCCCEEecCCCCeEEEeeCC
Q 009311 333 KVILHAGDALFIPEGWFHQVDSDD 356 (538)
Q Consensus 333 e~~L~pGD~LfIP~gWWH~V~s~~ 356 (538)
...+++||++|||++--|...|.+
T Consensus 226 ~~~V~~GD~i~~~~~~~h~~~n~G 249 (266)
T 4e2q_A 226 WYPVQAGDVIWMAPFVPQWYAALG 249 (266)
T ss_dssp EEEEETTCEEEECTTCCEEEEEES
T ss_pred EEEecCCCEEEECCCCcEEEEeCC
Confidence 679999999999999999999954
No 149
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=41.65 E-value=13 Score=37.20 Aligned_cols=25 Identities=16% Similarity=0.072 Sum_probs=21.9
Q ss_pred EEEEEcCCCEEecCCCCeEEEeeCC
Q 009311 332 QKVILHAGDALFIPEGWFHQVDSDD 356 (538)
Q Consensus 332 ~e~~L~pGD~LfIP~gWWH~V~s~~ 356 (538)
-.+.|+|||++|||+|=-|...+..
T Consensus 158 n~v~l~pGd~~~ipaGt~HA~~~G~ 182 (300)
T 1zx5_A 158 NTFETTPYDTFVIRPGIPHAGEGLR 182 (300)
T ss_dssp EEEECCTTCEEEECTTCCEEEESEE
T ss_pred ceeECCCCCEEEcCCCCceEcCCCC
Confidence 4689999999999999999987643
No 150
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=41.15 E-value=16 Score=38.60 Aligned_cols=24 Identities=29% Similarity=0.310 Sum_probs=21.8
Q ss_pred EEEEEcCCCEEecCCCCeEEEeeC
Q 009311 332 QKVILHAGDALFIPEGWFHQVDSD 355 (538)
Q Consensus 332 ~e~~L~pGD~LfIP~gWWH~V~s~ 355 (538)
-.+.|+|||++|||+|=-|...+.
T Consensus 266 N~v~L~pGea~flpAg~~HAYl~G 289 (440)
T 1pmi_A 266 NHVGLNKGEAMFLQAKDPHAYISG 289 (440)
T ss_dssp EEEEECTTCEEEECTTCCEEEEEE
T ss_pred ceEecCCCCEEecCCCCccccCCC
Confidence 368999999999999999999874
No 151
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=40.48 E-value=20 Score=34.34 Aligned_cols=23 Identities=22% Similarity=0.368 Sum_probs=21.6
Q ss_pred EEEEcCCCEEecCCCCeEEEeeC
Q 009311 333 KVILHAGDALFIPEGWFHQVDSD 355 (538)
Q Consensus 333 e~~L~pGD~LfIP~gWWH~V~s~ 355 (538)
+.+|++||++|+|++=-|...|.
T Consensus 87 ~~~l~~Gd~~~~p~~~~H~~~n~ 109 (246)
T 1sfn_A 87 TRTLREYDYVYLPAGEKHMLTAK 109 (246)
T ss_dssp EEEECTTEEEEECTTCCCEEEEE
T ss_pred EEEECCCCEEEECCCCCEEEEeC
Confidence 57899999999999999999997
No 152
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=40.23 E-value=17 Score=37.77 Aligned_cols=24 Identities=25% Similarity=0.268 Sum_probs=21.6
Q ss_pred EEEEEcCCCEEecCCCCeEEEeeC
Q 009311 332 QKVILHAGDALFIPEGWFHQVDSD 355 (538)
Q Consensus 332 ~e~~L~pGD~LfIP~gWWH~V~s~ 355 (538)
-.+.|+|||++|||+|=-|...+.
T Consensus 240 n~v~l~pGd~~fipAG~~HAy~~G 263 (394)
T 2wfp_A 240 NVVKLNPGEAMFLFAETPHAYLQG 263 (394)
T ss_dssp EEEEECTTCEEEECTTCCEEEEEE
T ss_pred eEEECCCCCEEEcCCCCceEcCCC
Confidence 368999999999999999998764
No 153
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=38.44 E-value=15 Score=36.17 Aligned_cols=26 Identities=19% Similarity=0.109 Sum_probs=22.9
Q ss_pred EEEEEcCCCEEecCCCCeEEEeeCCc
Q 009311 332 QKVILHAGDALFIPEGWFHQVDSDDL 357 (538)
Q Consensus 332 ~e~~L~pGD~LfIP~gWWH~V~s~~~ 357 (538)
....|+|||+||++++--|+..|.+.
T Consensus 230 ~~~~v~~GD~~~~~~~~~h~~~n~g~ 255 (278)
T 1sq4_A 230 DWVEVEAGDFMWLRAFCPQACYSGGP 255 (278)
T ss_dssp EEEEEETTCEEEEEESCCEEEECCSS
T ss_pred EEEEeCCCCEEEECCCCCEEEEcCCC
Confidence 46899999999999999999999543
No 154
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=36.07 E-value=21 Score=29.53 Aligned_cols=26 Identities=19% Similarity=0.358 Sum_probs=22.5
Q ss_pred cEEEEEcCCCEEecCCCCeEEEeeCC
Q 009311 331 SQKVILHAGDALFIPEGWFHQVDSDD 356 (538)
Q Consensus 331 ~~e~~L~pGD~LfIP~gWWH~V~s~~ 356 (538)
.++..|++||++.||.|.-=...+..
T Consensus 5 ~~~~~l~~G~v~vVPq~~~v~~~A~~ 30 (93)
T 1dgw_Y 5 RYAATLSEGDIIVIPSSFPVALKAAS 30 (93)
T ss_dssp EEEEEECTTCEEEECTTCCEEEEESS
T ss_pred hhhceecCCcEEEECCCCceeEEecC
Confidence 36889999999999999988888764
No 155
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=32.00 E-value=22 Score=34.48 Aligned_cols=17 Identities=24% Similarity=0.587 Sum_probs=15.4
Q ss_pred EEEEcCCCEEecCCCCe
Q 009311 333 KVILHAGDALFIPEGWF 349 (538)
Q Consensus 333 e~~L~pGD~LfIP~gWW 349 (538)
...++|||+++||+||-
T Consensus 206 ~~~~~aGD~~~~P~G~~ 222 (238)
T 3myx_A 206 SLTVNTGDTVFVAQGAP 222 (238)
T ss_dssp EEEECTTCEEEECTTCE
T ss_pred EEEECCCCEEEECCCCE
Confidence 57999999999999993
No 156
>4e17_B Catenin alpha-1; four helix bundle, cell adhesion; 2.30A {Mus musculus}
Probab=31.77 E-value=20 Score=25.09 Aligned_cols=11 Identities=55% Similarity=0.616 Sum_probs=9.6
Q ss_pred chHHHHHHHHH
Q 009311 455 CSLQALHDLVS 465 (538)
Q Consensus 455 ~~~q~l~~L~s 465 (538)
+++||||+|++
T Consensus 23 avrqALQdLls 33 (40)
T 4e17_B 23 AVRQALQDLLS 33 (40)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 57899999987
No 157
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=29.48 E-value=39 Score=33.21 Aligned_cols=34 Identities=15% Similarity=0.271 Sum_probs=26.3
Q ss_pred EEEEcCCCEEecCCCCeEEEeeCCceEEEEEeeCCc
Q 009311 333 KVILHAGDALFIPEGWFHQVDSDDLTIAVNFWWRSS 368 (538)
Q Consensus 333 e~~L~pGD~LfIP~gWWH~V~s~~~sIaVN~w~~~~ 368 (538)
+.+|++||.+|+|++=-|++.|.+ -+.=.|.+.+
T Consensus 110 ~~~L~~Gds~y~p~~~~H~~~N~~--~Ar~l~V~k~ 143 (266)
T 4e2q_A 110 SKKLTVDSYAYLPPNFHHSLDCVE--SATLVVFERR 143 (266)
T ss_dssp CEEECTTEEEEECTTCCCEEEESS--CEEEEEEEEE
T ss_pred EEEEcCCCEEEECCCCCEEEEeCC--CEEEEEEEeE
Confidence 368999999999999999999954 3444455543
No 158
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=25.85 E-value=42 Score=36.32 Aligned_cols=38 Identities=13% Similarity=0.127 Sum_probs=29.6
Q ss_pred EEEEeCCCCCceeeeccCCceeEEEEeEEEEEEeCCCCC
Q 009311 255 NLWMNNAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAAS 293 (538)
Q Consensus 255 ~lWiG~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~ 293 (538)
.+=|.+ +...+.||-+..-+..++.|+=.+=++-|.+.
T Consensus 52 R~~i~p-~Gl~lPh~~~a~el~yV~qG~g~~G~v~Pgcp 89 (531)
T 3fz3_A 52 RITIQR-NGLHLPSYSNAPQLIYIVQGRGVLGAVFSGCP 89 (531)
T ss_dssp EEEECT-TEEEEEEEESSCEEEEEEECEEEEEECCTTCC
T ss_pred EEEecC-CCEeCCccCCCCeEEEEEECcEEEEEEcCCCc
Confidence 344666 56778888877789999999988888877654
No 159
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=24.75 E-value=76 Score=30.08 Aligned_cols=35 Identities=0% Similarity=-0.015 Sum_probs=26.7
Q ss_pred EEEEcCCCEEecCCCCeEEEeeC----CceEEEEEeeCC
Q 009311 333 KVILHAGDALFIPEGWFHQVDSD----DLTIAVNFWWRS 367 (538)
Q Consensus 333 e~~L~pGD~LfIP~gWWH~V~s~----~~sIaVN~w~~~ 367 (538)
...+.|||+++||+|=.|..... +..-.+.+.|..
T Consensus 50 ~~~l~~g~l~~i~p~~~h~~~~~~~~~~~~~~~~i~f~~ 88 (276)
T 3gbg_A 50 SYEINSSSIILLKKNSIQRFSLTSLSDENINVSVITISD 88 (276)
T ss_dssp EEEECTTEEEEECTTCEEEEEEEECCSSCEEEEEEEECH
T ss_pred eEEEcCCCEEEEcCCCceeeccccCCCcceEEEEEEEcH
Confidence 57899999999999999998765 444555555543
No 160
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=24.34 E-value=41 Score=29.47 Aligned_cols=66 Identities=14% Similarity=-0.102 Sum_probs=44.7
Q ss_pred EEeCCCCCceeeeccCCceeEEEEeEEEEEEeCCCCCCCCccccccCCCCCcccCCCCCCCCCCCCcccccCCccEEEEE
Q 009311 257 WMNNAKSKSSAHYDPHHNLLCIVAGCKQVVLWPPAASPMLYPMSVYGEASNHSSISLENPDFSIYPRAEHSGEYSQKVIL 336 (538)
Q Consensus 257 WiG~~gs~T~lH~D~~~N~~~qI~G~Krw~LfPP~~~~~LYp~p~~~~~~~~S~Vd~~~pD~~kyP~f~~a~~~~~e~~L 336 (538)
.+- +|+..+.|..+..-...++.|+-+.. . + .|+ ...++
T Consensus 50 ~~~-pG~~~p~H~H~~~ee~~VL~G~~~~~------~---------g----------------~~~---------~~~~~ 88 (145)
T 2o1q_A 50 DCP-AGSSFAAHVHVGPGEYFLTKGKMDVR------G---------G----------------KAA---------GGDTA 88 (145)
T ss_dssp EEC-TTEEECCEEESSCEEEEEEEEEEEET------T---------C----------------GGG---------TSEEE
T ss_pred EEC-CCCCCCccCCCCCEEEEEEEeEEEEc------C---------C----------------CEe---------cceEe
Confidence 344 47788888888766788899987620 0 0 011 02589
Q ss_pred cCCCEEecCCCCeEE-EeeCCceEEEEE
Q 009311 337 HAGDALFIPEGWFHQ-VDSDDLTIAVNF 363 (538)
Q Consensus 337 ~pGD~LfIP~gWWH~-V~s~~~sIaVN~ 363 (538)
++||.+|+|+|=-|. +.+.+.++.+-+
T Consensus 89 ~~Gd~~~~p~g~~H~p~~~~e~~~~l~~ 116 (145)
T 2o1q_A 89 IAPGYGYESANARHDKTEFPVASEFYMS 116 (145)
T ss_dssp ESSEEEEECTTCEESCCEEEEEEEEEEE
T ss_pred CCCEEEEECcCCccCCeECCCCeEEEEE
Confidence 999999999999999 555555554443
No 161
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=23.87 E-value=51 Score=30.29 Aligned_cols=28 Identities=25% Similarity=0.398 Sum_probs=20.2
Q ss_pred EcCCCE--EecCCCCeEEEeeC-CceEEEEE
Q 009311 336 LHAGDA--LFIPEGWFHQVDSD-DLTIAVNF 363 (538)
Q Consensus 336 L~pGD~--LfIP~gWWH~V~s~-~~sIaVN~ 363 (538)
+..|+. ++||+|+|+..++. +.-..|+.
T Consensus 101 v~~Ge~pQ~vVP~G~wqaa~~~~g~~~LV~C 131 (170)
T 1yud_A 101 LAAGERPQFLVPKGCIFGSAMNQDGFSLVGC 131 (170)
T ss_dssp TTTTEESCEEECTTCEEEEEESSSSEEEEEE
T ss_pred cccCceeEEEECCCCEEEEEECCCCcEEEEE
Confidence 345777 89999999999986 43333443
No 162
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=22.55 E-value=98 Score=29.15 Aligned_cols=25 Identities=16% Similarity=0.424 Sum_probs=20.9
Q ss_pred EEEEEcCCCEEecCC---CCeEEEeeCC
Q 009311 332 QKVILHAGDALFIPE---GWFHQVDSDD 356 (538)
Q Consensus 332 ~e~~L~pGD~LfIP~---gWWH~V~s~~ 356 (538)
..+.|++||+|.++. .|+|.|....
T Consensus 156 ~~i~L~~GsllvM~G~~r~~~H~I~~~~ 183 (211)
T 3i3q_A 156 KRLLLEHGDVVVWGGESRLFYHGIQPLK 183 (211)
T ss_dssp EEEEECTTCEEEECGGGTTCCEEECCCC
T ss_pred EEEECCCCCEEEECchHHceEeccCccc
Confidence 578999999999974 5999998743
No 163
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=21.66 E-value=94 Score=30.84 Aligned_cols=33 Identities=15% Similarity=0.214 Sum_probs=28.8
Q ss_pred EEEEEcCCCEEecCCCCeEEEeeCCceEEEEEe
Q 009311 332 QKVILHAGDALFIPEGWFHQVDSDDLTIAVNFW 364 (538)
Q Consensus 332 ~e~~L~pGD~LfIP~gWWH~V~s~~~sIaVN~w 364 (538)
.+..|.+||+|-||++==|+..-.+.|+++..-
T Consensus 244 q~~~L~~~DsLLIpa~~~y~~~r~~gsv~L~I~ 276 (286)
T 2qnk_A 244 RRLSLAPDDSLLVLAGTSYAWERTQGSVALSVT 276 (286)
T ss_dssp EEEEECTTEEEEECTTCCEEEEECTTCEEEEEE
T ss_pred eEEeccCCCEEEecCCCeEEEEecCCeEEEEEE
Confidence 468999999999999999999998878877654
Done!