Query         009312
Match_columns 538
No_of_seqs    189 out of 1912
Neff          11.1
Searched_HMMs 46136
Date          Thu Mar 28 23:01:41 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009312.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009312hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 5.9E-86 1.3E-90  636.7  47.3  463   38-531    23-488 (489)
  2 KOG0158 Cytochrome P450 CYP3/C 100.0 1.7E-80 3.7E-85  588.5  39.9  465   30-531    20-499 (499)
  3 PLN02687 flavonoid 3'-monooxyg 100.0   2E-79 4.3E-84  614.9  48.2  499   14-533     7-511 (517)
  4 PLN02971 tryptophan N-hydroxyl 100.0 4.7E-79   1E-83  613.8  48.2  479   38-537    54-539 (543)
  5 PLN03234 cytochrome P450 83B1; 100.0 1.1E-78 2.3E-83  609.3  47.6  472   35-530    22-498 (499)
  6 PLN03112 cytochrome P450 famil 100.0 4.4E-78 9.5E-83  606.6  49.3  498   17-531     7-508 (514)
  7 PLN00110 flavonoid 3',5'-hydro 100.0 4.9E-78 1.1E-82  600.9  48.5  476   36-535    26-501 (504)
  8 PLN02183 ferulate 5-hydroxylas 100.0 2.5E-77 5.3E-82  599.6  45.9  469   37-531    32-512 (516)
  9 PTZ00404 cytochrome P450; Prov 100.0 5.4E-77 1.2E-81  594.4  45.9  458   36-530    24-482 (482)
 10 PLN00168 Cytochrome P450; Prov 100.0 1.3E-76 2.8E-81  594.9  48.7  486   34-532    28-518 (519)
 11 PLN02394 trans-cinnamate 4-mon 100.0   1E-76 2.2E-81  595.6  48.0  475   34-531    23-502 (503)
 12 PLN02966 cytochrome P450 83A1  100.0 1.2E-76 2.5E-81  593.3  46.0  472   34-533    22-500 (502)
 13 PLN02655 ent-kaurene oxidase   100.0 7.5E-75 1.6E-79  574.7  43.8  461   43-532     1-465 (466)
 14 PLN03018 homomethionine N-hydr 100.0 2.6E-73 5.7E-78  567.4  49.7  480   39-537    38-529 (534)
 15 KOG0159 Cytochrome P450 CYP11/ 100.0 1.5E-74 3.2E-79  534.1  37.3  463   39-531    48-518 (519)
 16 KOG0157 Cytochrome P450 CYP4/C 100.0 2.1E-74 4.5E-79  569.5  38.7  459   39-532    33-497 (497)
 17 PLN02290 cytokinin trans-hydro 100.0 2.1E-74 4.5E-79  580.2  39.3  460   36-532    37-516 (516)
 18 PLN02500 cytochrome P450 90B1  100.0 6.8E-73 1.5E-77  565.0  40.8  447   34-530    31-489 (490)
 19 PF00067 p450:  Cytochrome P450 100.0 3.1E-73 6.8E-78  570.6  32.6  455   43-527     1-463 (463)
 20 PLN02774 brassinosteroid-6-oxi 100.0 6.8E-72 1.5E-76  553.2  38.2  434   35-529    25-462 (463)
 21 PLN02738 carotene beta-ring hy 100.0 8.1E-71 1.8E-75  554.9  42.5  454   53-532   143-596 (633)
 22 PLN02169 fatty acid (omega-1)- 100.0 5.4E-71 1.2E-75  549.1  40.4  454   41-530    31-499 (500)
 23 KOG0684 Cytochrome P450 [Secon 100.0 3.9E-71 8.5E-76  498.0  34.5  449   41-532    31-486 (486)
 24 PLN03195 fatty acid omega-hydr 100.0 7.9E-71 1.7E-75  553.7  40.0  459   42-531    31-516 (516)
 25 PLN02196 abscisic acid 8'-hydr 100.0 9.2E-71   2E-75  544.5  39.3  452   12-530     8-462 (463)
 26 PLN03141 3-epi-6-deoxocathaste 100.0 1.9E-69   4E-74  534.6  38.9  439   36-530     2-449 (452)
 27 PLN02302 ent-kaurenoic acid ox 100.0 1.5E-68 3.2E-73  536.6  42.4  443   35-532    36-489 (490)
 28 PLN02987 Cytochrome P450, fami 100.0 1.7E-68 3.8E-73  526.0  41.3  457   16-531     6-469 (472)
 29 PLN02936 epsilon-ring hydroxyl 100.0   6E-68 1.3E-72  527.6  40.0  460   42-532    13-483 (489)
 30 PLN02426 cytochrome P450, fami 100.0 5.3E-66 1.1E-70  512.4  42.5  443   49-532    49-501 (502)
 31 PLN02648 allene oxide synthase 100.0 2.9E-58 6.3E-63  449.4  29.9  414   37-504    13-462 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 3.1E-53 6.6E-58  409.7  33.0  383   63-530    24-410 (411)
 33 PF12554 MOZART1:  Mitotic-spin  70.4      12 0.00026   23.5   4.0   43  322-364     6-48  (48)
 34 PF12508 DUF3714:  Protein of u  56.6     3.5 7.6E-05   35.3  -0.1   43  381-425    52-94  (200)
 35 PF05952 ComX:  Bacillus compet  52.1      13 0.00028   24.3   1.9   25  344-368     4-28  (57)
 36 PF15330 SIT:  SHP2-interacting  47.1      51  0.0011   25.0   4.8   43   16-58      8-55  (107)
 37 KOG3653 Transforming growth fa  41.4 1.2E+02  0.0026   30.0   7.3   35   72-107   221-256 (534)
 38 PF09201 SRX:  SRX;  InterPro:   35.2      35 0.00076   26.9   2.3   23  474-496    18-40  (148)
 39 PRK06789 flagellar motor switc  35.0      33 0.00071   24.0   2.0   41  387-427    21-63  (74)
 40 PF08492 SRP72:  SRP72 RNA-bind  32.6      28  0.0006   23.0   1.3   13  433-450    38-50  (59)
 41 TIGR03779 Bac_Flav_CT_M Bacter  31.4      11 0.00025   36.2  -0.9   44  381-426   255-298 (410)
 42 PF14129 DUF4296:  Domain of un  30.7 2.1E+02  0.0045   20.7   6.1   49  319-367    30-78  (87)
 43 KOG3506 40S ribosomal protein   30.3      23  0.0005   22.6   0.6   11  467-477    12-22  (56)
 44 COG0767 Ttg2B ABC-type transpo  29.6      57  0.0012   29.4   3.1   55  320-407   102-156 (267)
 45 COG0851 MinE Septum formation   28.8 1.1E+02  0.0024   22.1   3.8   18  352-369    35-52  (88)
 46 PF13625 Helicase_C_3:  Helicas  26.8 1.4E+02  0.0031   23.5   4.7   42   61-104    74-115 (129)
 47 PF14459 Prok-E2_C:  Prokaryoti  26.5      24 0.00052   26.2   0.2   18  462-479   103-120 (131)
 48 PF13893 RRM_5:  RNA recognitio  26.1 1.6E+02  0.0035   18.7   4.2   36   67-102     1-40  (56)
 49 PHA03049 IMV membrane protein;  24.2 1.8E+02   0.004   19.6   3.8   17   14-30      7-23  (68)
 50 PF05961 Chordopox_A13L:  Chord  23.2   2E+02  0.0043   19.6   3.9   19   13-31      6-24  (68)
 51 PF11138 DUF2911:  Protein of u  22.4      84  0.0018   25.5   2.6   40  406-446    52-98  (145)
 52 PF10717 ODV-E18:  Occlusion-de  22.0 2.8E+02   0.006   19.8   4.6   21   12-32     24-44  (85)
 53 COG4471 Uncharacterized protei  21.9 2.2E+02  0.0047   20.6   4.1   34   69-102    20-53  (90)
 54 PF11227 DUF3025:  Protein of u  21.9      49  0.0011   28.6   1.2   20  428-447   192-211 (212)
 55 PF14483 Cut8_M:  Cut8 dimerisa  21.1 1.3E+02  0.0028   17.8   2.5   12  350-361    24-35  (38)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=5.9e-86  Score=636.70  Aligned_cols=463  Identities=43%  Similarity=0.782  Sum_probs=409.3

Q ss_pred             CCCCCCCCCCCCcccccccCCCCCChhHHHHHHHHhhCCeEEEeccCeeEEEecCHHHHHHHHHhCCccccCCCc-cccc
Q 009312           38 ANAKLPPGQRGLPVVGYLPFLGTTDLHKTFNDLSGVYGPIFKLWFGNKLCVVVSSPSLVKQVVHDQDLTFSNRSP-SIAG  116 (538)
Q Consensus        38 ~~~~~~pgp~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~v~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~-~~~~  116 (538)
                      ++.++||||+++|++||++.+....+++.+.++.++||+||++|+|..++|+|+|+++++|++++++..|.+|+. ....
T Consensus        23 ~~~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~  102 (489)
T KOG0156|consen   23 KRRNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATL  102 (489)
T ss_pred             CCCCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhH
Confidence            348999999999999999999544589999999999999999999999999999999999999999999999997 2344


Q ss_pred             chhccCCCceecCCCChhhHHHHhhhhhhcCchhhHHHhHHHHHHHHHHHHHHHHhhccccCCCCCCCccchHHhHHHHH
Q 009312          117 LVTTYGGNDIALSNYGSQWRKLRKLFVGKLMSNTSLDACYALRKQEVKNTIRDLYNSDRDNIGNGSGNPIDIGELSNSTL  196 (538)
Q Consensus       117 ~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~vdl~~~~~~~~  196 (538)
                      ....+++.+++++.+|+.|+.+||.....+++...++.....-.++++.+++.+.+ ..      .+.+||+...+..++
T Consensus       103 ~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~------~~~~vdl~~~l~~~~  175 (489)
T KOG0156|consen  103 KYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SK------KGEPVDLSELLDLLV  175 (489)
T ss_pred             HHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cC------CCceeeHHHHHHHHH
Confidence            66666788999998999999999999999999999999988889999999999987 22      238999999999999


Q ss_pred             HHHHHHhhhccchhhhccccchhHHHHHHHHHHHHHhhCCcccccccc-cccccc-hhhHHHHHHHHHHHHHHHHHHHHH
Q 009312          197 VCVMKNMLWGEALELREKGITNLGAELKFKFAEFMVLLGTPNISDIFP-VLSWLD-IQGIERRAQKISLWLEDVINSTVE  274 (538)
Q Consensus       197 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~l~-~~~~~~~~~~~~~~l~~~~~~~i~  274 (538)
                      .++|++.+||.++...+.   +...++...+.+.....+.+.+.+++| ++.+++ ..+..+........+..++++.++
T Consensus       176 ~nvI~~~~fG~rf~~~~~---~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~  252 (489)
T KOG0156|consen  176 GNVICRMLFGRRFEEEDE---EEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIID  252 (489)
T ss_pred             HHHHHHHHhCCccccCCc---hHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999987643   445668889999999999998999999 677775 336777888888889999999999


Q ss_pred             HHHhhhhhhhhhhhhcCCCCCCCchhHHHHHHhhccCccccCCCCHHHHHHHHHHHHHhcccchhhHHHHHHHHHhcCch
Q 009312          275 QYRNKDFVIEGEERAGNNIEGSRNKDFLQLLLELQDNEDSANSISMNQFKALLVDIITGGTDTTTTMVEWTMAELMQHPL  354 (538)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~  354 (538)
                      ++++..      .     .  +...|++|.||...++++... +++++|...+..+++||+|||++++.|++.+|++||+
T Consensus       253 eh~~~~------~-----~--~~~~D~vD~lL~~~~~~~~~~-~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pe  318 (489)
T KOG0156|consen  253 EHREKI------G-----D--EEGRDFVDALLKLMKEEKAEG-LTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPE  318 (489)
T ss_pred             HHHhhh------c-----c--CCCCcHHHHHHHhhcccccCC-CCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHH
Confidence            988753      0     1  112899999998866533233 9999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCccccccCCCchhHHHHHhhhccCCCCCcCcccccccCcccccCeecCCCCEEEeehhhhhcCC
Q 009312          355 VTKKVHEELAEVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPAQPLLVPHRASESSSIGGYTIPKDTTLMLNVWAIHRDP  434 (538)
Q Consensus       355 ~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~dp  434 (538)
                      +|+|+++||++++|.++.++.+|+.+||||+|+|+||+|++|++|+.+||.+.+|+.++||.|||||.|+++.+++||||
T Consensus       319 v~~K~qeEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp  398 (489)
T KOG0156|consen  319 VQKKLQEEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDP  398 (489)
T ss_pred             HHHHHHHHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCC
Confidence            99999999999999888899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCcccCCCCCCccccCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHhhceeecCCCCCCccCcCcC
Q 009312          435 RLWDNPLEFRPERFLNDGIASKFDYSGKNFQYLPFGSGRRKCAGIALAERLLMFVLASFLHSFEWKLPVGTKLDLSEKYG  514 (538)
Q Consensus       435 ~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~  514 (538)
                      ++|+||++|+||||++++     +.++....++|||.|+|+|||..+|.+|+.++++.++++|+++++++ ++|..+. +
T Consensus       399 ~vw~dP~eF~PERFl~~~-----d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~-~~d~~e~-~  471 (489)
T KOG0156|consen  399 KVWEDPEEFKPERFLDSN-----DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG-KVDMEEA-G  471 (489)
T ss_pred             ccCCCccccChhhhcCCc-----cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC-CCCCccc-c
Confidence            999999999999999843     11235678999999999999999999999999999999999999877 7676666 4


Q ss_pred             ceeccCCCeeeeeccCC
Q 009312          515 FVTKKKEPLVAIPTPRL  531 (538)
Q Consensus       515 ~~~~~~~~~~~~~~~r~  531 (538)
                      .+...+.++.+.+.+|.
T Consensus       472 ~~~~~~~pl~~~~~~r~  488 (489)
T KOG0156|consen  472 LTLKKKKPLKAVPVPRL  488 (489)
T ss_pred             cceecCCcceeeeecCC
Confidence            66777778888887774


No 2  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.7e-80  Score=588.49  Aligned_cols=465  Identities=25%  Similarity=0.392  Sum_probs=361.5

Q ss_pred             HhhhccCCCCCCCCCCCCCCcccccccCCCC-CChhHHHHHHHHhhCCeEEEeccCeeEEEecCHHHHHHHHHhCCcccc
Q 009312           30 WNVNKSSKANAKLPPGQRGLPVVGYLPFLGT-TDLHKTFNDLSGVYGPIFKLWFGNKLCVVVSSPSLVKQVVHDQDLTFS  108 (538)
Q Consensus        30 ~~~~~~~~~~~~~~pgp~~~p~lG~~~~~~~-~~~~~~~~~~~~kyG~v~~v~~~~~~~v~v~dp~~~~~i~~~~~~~~~  108 (538)
                      |.++....+.++.+|||+++|++||+..+.. ........+.+.++|++++++.+.+|.++|.|||++++|+.++.++|.
T Consensus        20 ~~~~~~~yw~rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~   99 (499)
T KOG0158|consen   20 WLRWTYSYWRRRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFY   99 (499)
T ss_pred             HHHhhhhhhccCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCc
Confidence            3333445566679999999999999987642 223555555555669999999999999999999999999999998998


Q ss_pred             CCC--cccccchhccCCCceecCCCChhhHHHHhhhhhhcCchhhHHHhHHHHHHHHHHHHHHHHhhccccCCCCCCCcc
Q 009312          109 NRS--PSIAGLVTTYGGNDIALSNYGSQWRKLRKLFVGKLMSNTSLDACYALRKQEVKNTIRDLYNSDRDNIGNGSGNPI  186 (538)
Q Consensus       109 ~~~--~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v  186 (538)
                      ++.  .......  -.+...++..+|+.||++|..+ +|.|+..+++.+.+.+.+.++++++.+.+...      .+..+
T Consensus       100 ~r~~~~~~d~~~--~l~~~~Lf~~~g~~WK~lR~~l-sP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~------~~~~~  170 (499)
T KOG0158|consen  100 NRKRPIYGDPED--PLSALNLFFLRGERWKRLRTKL-SPTFTSGKLKKMFPTMEEVGDELVRHLRRKSE------GGQEG  170 (499)
T ss_pred             CCCCCCcCCCCC--cccccCchhccCchHHHHHHhh-ccccchhhHHHHHHHHHHHHHHHHHHHHHhhc------ccCCc
Confidence            844  2221111  1123456677799999999998 79999999999999999999999999987644      33578


Q ss_pred             chHHhHHHHHHHHHHHhhhccchhhhccccchhHHHHHHHHHHHHHh-hCCc----ccccccccccccchhhHHHHHHHH
Q 009312          187 DIGELSNSTLVCVMKNMLWGEALELREKGITNLGAELKFKFAEFMVL-LGTP----NISDIFPVLSWLDIQGIERRAQKI  261 (538)
Q Consensus       187 dl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~P~l~~l~~~~~~~~~~~~  261 (538)
                      ++.+.+..++.|+|++++||.+.+...+..    ..+...-...+.. ....    .....+|.+...  ..........
T Consensus       171 ~~~dl~~~yT~DVI~~~AfG~~~~s~~d~~----~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~--l~~~~~~~~~  244 (499)
T KOG0158|consen  171 EIKDLCARYTTDVIGSCAFGLDANSLRDPK----AEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALP--LRVKLFPEDV  244 (499)
T ss_pred             cHHHHHHHHHHHHHhHhhcccchhhhcCch----HHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHh--hhcccChHHH
Confidence            999999999999999999999988777421    2222222222211 1111    112223332211  0011122344


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhhhhhhhcCCCCCCCchhHHHHHHhhccC--cc-ccC-CCCHHHHHHHHHHHHHhcccc
Q 009312          262 SLWLEDVINSTVEQYRNKDFVIEGEERAGNNIEGSRNKDFLQLLLELQDN--ED-SAN-SISMNQFKALLVDIITGGTDT  337 (538)
Q Consensus       262 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~--~~-~~~-~l~~~~i~~~~~~~~~ag~~t  337 (538)
                      .+.+.+.+...++.|..               ....+.|+++.|++.+.+  .+ ... .+|.+||+++++.|++||.||
T Consensus       245 ~~~~~~~v~~~v~~R~~---------------~~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeT  309 (499)
T KOG0158|consen  245 TDFFRKLVNSRVEQREK---------------ENIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFET  309 (499)
T ss_pred             HHHHHHHHHHHHHHHHh---------------cCCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHh
Confidence            44455555555555421               135688999999988743  11 112 599999999999999999999


Q ss_pred             hhhHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCccccccCCCchhHHHHHhhhccCCCCCcCcccccccCccccc-Cee
Q 009312          338 TTTMVEWTMAELMQHPLVTKKVHEELAEVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPAQPLLVPHRASESSSIG-GYT  416 (538)
Q Consensus       338 t~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~-g~~  416 (538)
                      ||+++++++|+|++||++|+|||+||+++......++++.+++|+||++||+||||+||++|. +.|.+++|++++ ++.
T Consensus       310 ts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~-~~R~C~k~~~i~~~~~  388 (499)
T KOG0158|consen  310 TASTLSFALYELAKNPDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPF-LNRECTKDYEIPGGFV  388 (499)
T ss_pred             HHHHHHHHHHHHhcChHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCccc-ccceecCceecCCCeE
Confidence            999999999999999999999999999997654449999999999999999999999999999 789999999999 999


Q ss_pred             cCCCCEEEeehhhhhcCCCCCCCCCCCCCCcccCCCCCCccccCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHhh
Q 009312          417 IPKDTTLMLNVWAIHRDPRLWDNPLEFRPERFLNDGIASKFDYSGKNFQYLPFGSGRRKCAGIALAERLLMFVLASFLHS  496 (538)
Q Consensus       417 ip~G~~v~~~~~~~~~dp~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~  496 (538)
                      ||||+.|.++++++||||++||||++|+||||.+.+.+     ..++..|+|||.|||.|+|.+||++|+|+.|++||++
T Consensus       389 i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~-----~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~  463 (499)
T KOG0158|consen  389 IPKGTPVMIPTYALHHDPEYWPEPEKFKPERFEEENNK-----SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRN  463 (499)
T ss_pred             eCCCCEEEeecccccCCcccCCCcccCCCccCCCCccc-----ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999974322     2367889999999999999999999999999999999


Q ss_pred             ceeecCCCCCCcc--CcCcCceeccCCCeeeeeccCC
Q 009312          497 FEWKLPVGTKLDL--SEKYGFVTKKKEPLVAIPTPRL  531 (538)
Q Consensus       497 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~r~  531 (538)
                      |+|+..+. .+..  ....++++.|++++++++++|.
T Consensus       464 f~~~~~~~-t~~~~~~~~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  464 FSFEVCPT-TIIPLEGDPKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             CEEecCCc-ccCcccCCccceeeecCCceEEEEEeCC
Confidence            99997663 2222  1123788999999999999985


No 3  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=2e-79  Score=614.93  Aligned_cols=499  Identities=38%  Similarity=0.696  Sum_probs=394.5

Q ss_pred             HHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCcccccccCCCCCChhHHHHHHHHhhCCeEEEeccCeeEEEecCH
Q 009312           14 AIITCLVAVVAVVYFAWNVNKSSKANAKLPPGQRGLPVVGYLPFLGTTDLHKTFNDLSGVYGPIFKLWFGNKLCVVVSSP   93 (538)
Q Consensus        14 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~pgp~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~v~~~~~~~v~v~dp   93 (538)
                      .++.++++++++++++|.+.+.+.+..+.||||.++|++||++.+ ..+++.++.+++++||++|++++|+.++|+|+||
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pPgp~~~P~iG~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p   85 (517)
T PLN02687          7 LLLGTVAVSVLVWCLLLRRGGSGKHKRPLPPGPRGWPVLGNLPQL-GPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASA   85 (517)
T ss_pred             HHHHHHHHHHHHHHHHhccccCCCCCCCCCccCCCCCccccHHhc-CCchhHHHHHHHHHhCCeeEEecCCceEEEeCCH
Confidence            344444444444454555445555566789999999999999887 4578899999999999999999999999999999


Q ss_pred             HHHHHHHHhCCccccCCCcccccchhccCCCceecCCCChhhHHHHhhhhhhcCchhhHHHhHHHHHHHHHHHHHHHHhh
Q 009312           94 SLVKQVVHDQDLTFSNRSPSIAGLVTTYGGNDIALSNYGSQWRKLRKLFVGKLMSNTSLDACYALRKQEVKNTIRDLYNS  173 (538)
Q Consensus        94 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~  173 (538)
                      +++++++.++...|.+++...........+.+.+++.+|+.|+++|+.+..++|+...++.+.+.+.+++.++++.+...
T Consensus        86 ~~~~~il~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~  165 (517)
T PLN02687         86 SVAAQFLRTHDANFSNRPPNSGAEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQ  165 (517)
T ss_pred             HHHHHHHHhcchhhhcCCCccchhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHh
Confidence            99999999877777776554333333333456677778999999999985488999999999999999999999999753


Q ss_pred             ccccCCCCCCCccchHHhHHHHHHHHHHHhhhccchhhhccccchhHHHHHHHHHHHHHhhCCcccccccccccccchhh
Q 009312          174 DRDNIGNGSGNPIDIGELSNSTLVCVMKNMLWGEALELREKGITNLGAELKFKFAEFMVLLGTPNISDIFPVLSWLDIQG  253 (538)
Q Consensus       174 ~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~  253 (538)
                      .       +++++|+.++++.+++|+++.++||.++...+.+  .....+.+.+...+...........+|++.+++..+
T Consensus       166 ~-------~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~  236 (517)
T PLN02687        166 H-------GTAPVNLGQLVNVCTTNALGRAMVGRRVFAGDGD--EKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQG  236 (517)
T ss_pred             c-------CCCceeHHHHHHHHHHHHHHHHHhCccccccCCc--chHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCccc
Confidence            2       4567999999999999999999999987543321  223445555555554433322334567666654333


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhcCCCCCCCchhHHHHHHhhccCc---cccCCCCHHHHHHHHHHH
Q 009312          254 IERRAQKISLWLEDVINSTVEQYRNKDFVIEGEERAGNNIEGSRNKDFLQLLLELQDNE---DSANSISMNQFKALLVDI  330 (538)
Q Consensus       254 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~---~~~~~l~~~~i~~~~~~~  330 (538)
                      ..++..+..+.+.+++.+.++++++..      +     .......|+++.+++..++.   ..+..++++++.+++.++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~i~~r~~~~------~-----~~~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~  305 (517)
T PLN02687        237 VVGKMKRLHRRFDAMMNGIIEEHKAAG------Q-----TGSEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNL  305 (517)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhc------c-----ccCcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHH
Confidence            345566677788888888888876543      1     00123569999999865431   123469999999999999


Q ss_pred             HHhcccchhhHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCccccccCCCchhHHHHHhhhccCCCCCcCcccccccCcc
Q 009312          331 ITGGTDTTTTMVEWTMAELMQHPLVTKKVHEELAEVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPAQPLLVPHRASESS  410 (538)
Q Consensus       331 ~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~  410 (538)
                      ++||+|||+.+++|++++|++||++|+|+++|++++.+.++.++.+++++||||+|||+||||++|+++..++|.+.+|+
T Consensus       306 ~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~  385 (517)
T PLN02687        306 FTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEEC  385 (517)
T ss_pred             hccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCe
Confidence            99999999999999999999999999999999999988777788999999999999999999999999987899999999


Q ss_pred             cccCeecCCCCEEEeehhhhhcCCCCCCCCCCCCCCcccCCCCCCccccCCCCcceeccCCCCCCCccHHHHHHHHHHHH
Q 009312          411 SIGGYTIPKDTTLMLNVWAIHRDPRLWDNPLEFRPERFLNDGIASKFDYSGKNFQYLPFGSGRRKCAGIALAERLLMFVL  490 (538)
Q Consensus       411 ~l~g~~ip~G~~v~~~~~~~~~dp~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l  490 (538)
                      +++||.||+|+.|.++.+.+||||++|+||++|+||||++++..........+..|+|||+|+|.|+|++||++|+++++
T Consensus       386 ~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~l  465 (517)
T PLN02687        386 EINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLT  465 (517)
T ss_pred             eECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999974321111112245679999999999999999999999999


Q ss_pred             HHHHhhceeecCCCCC---CccCcCcCceeccCCCeeeeeccCCCC
Q 009312          491 ASFLHSFEWKLPVGTK---LDLSEKYGFVTKKKEPLVAIPTPRLPN  533 (538)
Q Consensus       491 ~~ll~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~r~~~  533 (538)
                      ++||++|++++.++..   ++....++.+..++.++++++++|+=+
T Consensus       466 a~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~  511 (517)
T PLN02687        466 ATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVHPRPRLLP  511 (517)
T ss_pred             HHHHHhcceecCCCCCcccCCcccccceeeecCCCeEEeeccCCCh
Confidence            9999999999886632   333334556667778899999999744


No 4  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=4.7e-79  Score=613.81  Aligned_cols=479  Identities=26%  Similarity=0.495  Sum_probs=374.7

Q ss_pred             CCCCCCCCCCCCcccccccCCCCCC-hhHHHHHHHHhhC-CeEEEeccCeeEEEecCHHHHHHHHHhCCccccCCCcccc
Q 009312           38 ANAKLPPGQRGLPVVGYLPFLGTTD-LHKTFNDLSGVYG-PIFKLWFGNKLCVVVSSPSLVKQVVHDQDLTFSNRSPSIA  115 (538)
Q Consensus        38 ~~~~~~pgp~~~p~lG~~~~~~~~~-~~~~~~~~~~kyG-~v~~v~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~  115 (538)
                      ++.+.||||+++|++||++.+..+. .+.++.++.++|| +|+++++|++++|+|+||+++++++.+++..|.+++....
T Consensus        54 r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~  133 (543)
T PLN02971         54 KLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYA  133 (543)
T ss_pred             CCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccc
Confidence            4567899999999999998774322 4678899999999 7999999999999999999999999998878887765433


Q ss_pred             cchhccCCCceecCCCChhhHHHHhhhhhhcCchhhHHHhHHHHHHHHHHHHHHHHhhccccCCCCCCCccchHHhHHHH
Q 009312          116 GLVTTYGGNDIALSNYGSQWRKLRKLFVGKLMSNTSLDACYALRKQEVKNTIRDLYNSDRDNIGNGSGNPIDIGELSNST  195 (538)
Q Consensus       116 ~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~vdl~~~~~~~  195 (538)
                      ....+.+..+++++.+|+.|+++||.+..+++++...+.+.+.+.++++.+++.+.+...      ++.++|+.+.+..+
T Consensus       134 ~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~~~vd~~~~~~~~  207 (543)
T PLN02971        134 QKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVK------NSEPVDLRFVTRHY  207 (543)
T ss_pred             hhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhcc------CCCceehHHHHHHH
Confidence            333332223457777899999999999777888777778888888888888887765433      45679999999999


Q ss_pred             HHHHHHHhhhccchhhhccc-cchhHHHHHHHHHHHHHhh---CCcccccccccccccchhhHHHHHHHHHHHHHHHHHH
Q 009312          196 LVCVMKNMLWGEALELREKG-ITNLGAELKFKFAEFMVLL---GTPNISDIFPVLSWLDIQGIERRAQKISLWLEDVINS  271 (538)
Q Consensus       196 ~~~~i~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~l~~~~~~  271 (538)
                      ++++|+.++||.++...... ......+....+...+...   ....+...+|++++++..+..+...+..+.+.+++.+
T Consensus       208 t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~  287 (543)
T PLN02971        208 CGNAIKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDP  287 (543)
T ss_pred             HHHHHHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHH
Confidence            99999999999987432100 0000112222233322211   1122345567766553333445556667778888888


Q ss_pred             HHHHHHhhhhhhhhhhhhcCCCCCCCchhHHHHHHhhccCccccCCCCHHHHHHHHHHHHHhcccchhhHHHHHHHHHhc
Q 009312          272 TVEQYRNKDFVIEGEERAGNNIEGSRNKDFLQLLLELQDNEDSANSISMNQFKALLVDIITGGTDTTTTMVEWTMAELMQ  351 (538)
Q Consensus       272 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~  351 (538)
                      .++++++...     +     .......|+++.|++..++. ....++++++.+++.++++||+|||+.+++|++++|++
T Consensus       288 ~i~~~~~~~~-----~-----~~~~~~~d~l~~ll~~~~~~-~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~  356 (543)
T PLN02971        288 IIDERIKMWR-----E-----GKRTQIEDFLDIFISIKDEA-GQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMIN  356 (543)
T ss_pred             HHHHHHHHHh-----c-----cCCCCCcCHHHHHHhhhccc-CCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHh
Confidence            8887765331     0     00112469999999864321 12248999999999999999999999999999999999


Q ss_pred             CchHHHHHHHHHHHHhcCCCccccccCCCchhHHHHHhhhccCCCCCcCcccccccCcccccCeecCCCCEEEeehhhhh
Q 009312          352 HPLVTKKVHEELAEVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPAQPLLVPHRASESSSIGGYTIPKDTTLMLNVWAIH  431 (538)
Q Consensus       352 ~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~  431 (538)
                      ||++|+|+|+||+++++.++.++++++++|||++|||+||||++|++|..++|.+.+|++++||.||||+.|+++++.+|
T Consensus       357 ~Pevq~kl~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~  436 (543)
T PLN02971        357 KPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLG  436 (543)
T ss_pred             CHHHHHHHHHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhc
Confidence            99999999999999998778899999999999999999999999999987899999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCcccCCCCCCccccCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHhhceeecCCC-CCCccC
Q 009312          432 RDPRLWDNPLEFRPERFLNDGIASKFDYSGKNFQYLPFGSGRRKCAGIALAERLLMFVLASFLHSFEWKLPVG-TKLDLS  510 (538)
Q Consensus       432 ~dp~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~-~~~~~~  510 (538)
                      |||++|+||++|+||||+++..+.  .....+..|+|||+|+|.|+|++||+.|+++++++||++|+++++++ .+++..
T Consensus       437 ~d~~~~~dP~~F~PeRfl~~~~~~--~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~  514 (543)
T PLN02971        437 RNPKVWSDPLSFKPERHLNECSEV--TLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELM  514 (543)
T ss_pred             CChhhCCCccccCcccCCCCCccc--cccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcchh
Confidence            999999999999999999732110  11124567999999999999999999999999999999999998766 467777


Q ss_pred             cCcCceeccCCCeeeeeccCCCCCCCC
Q 009312          511 EKYGFVTKKKEPLVAIPTPRLPNSELY  537 (538)
Q Consensus       511 ~~~~~~~~~~~~~~~~~~~r~~~~~~~  537 (538)
                      +.++ ++...+++.+.+++|.+ +++|
T Consensus       515 ~~~~-~~~~~~~~~~~~~~~~~-~~~~  539 (543)
T PLN02971        515 ESSH-DMFLSKPLVMVGELRLS-EDLY  539 (543)
T ss_pred             hhcC-cccccccceeeeeecCC-cccc
Confidence            7776 66566689999999944 5666


No 5  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=1.1e-78  Score=609.29  Aligned_cols=472  Identities=31%  Similarity=0.597  Sum_probs=380.4

Q ss_pred             cCCCCCCCCCCCCCCcccccccCCCCCChhHHHHHHHHhhCCeEEEeccCeeEEEecCHHHHHHHHHhCCccccCCCccc
Q 009312           35 SSKANAKLPPGQRGLPVVGYLPFLGTTDLHKTFNDLSGVYGPIFKLWFGNKLCVVVSSPSLVKQVVHDQDLTFSNRSPSI  114 (538)
Q Consensus        35 ~~~~~~~~~pgp~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~v~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~  114 (538)
                      ..+++.+.||||+++|++||++.+...++..++.+++++||++|++++|+.++|+++|||++++|+.++...|..++...
T Consensus        22 ~~~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~  101 (499)
T PLN03234         22 TTKKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLK  101 (499)
T ss_pred             hcCCCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCch
Confidence            34456688999999999999988744467889999999999999999999999999999999999998877777666433


Q ss_pred             ccchhccCCCceecCCCChhhHHHHhhhhhhcCchhhHHHhHHHHHHHHHHHHHHHHhhccccCCCCCCCccchHHhHHH
Q 009312          115 AGLVTTYGGNDIALSNYGSQWRKLRKLFVGKLMSNTSLDACYALRKQEVKNTIRDLYNSDRDNIGNGSGNPIDIGELSNS  194 (538)
Q Consensus       115 ~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~vdl~~~~~~  194 (538)
                      ........+..+.+...++.|+++|+.++.++|+++.++.+.+.+.++++++++.+.+...      +++++|+.+++..
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~------~~~~vd~~~~~~~  175 (499)
T PLN03234        102 GQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAAD------QSGTVDLSELLLS  175 (499)
T ss_pred             hhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhcc------CCCeEEHHHHHHH
Confidence            2222222233444556689999999986678999999999999999999999999976544      5668999999999


Q ss_pred             HHHHHHHHhhhccchhhhccccchhHHHHHHHHHHHHHhhCCcccccccccccccc-hhhHHHHHHHHHHHHHHHHHHHH
Q 009312          195 TLVCVMKNMLWGEALELREKGITNLGAELKFKFAEFMVLLGTPNISDIFPVLSWLD-IQGIERRAQKISLWLEDVINSTV  273 (538)
Q Consensus       195 ~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~-~~~~~~~~~~~~~~l~~~~~~~i  273 (538)
                      +++|+++.++||.+++...    .....+.+.+...........+...+|++.+++ ..+..++..++.+.+.+++.+.+
T Consensus       176 ~t~dvi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i  251 (499)
T PLN03234        176 FTNCVVCRQAFGKRYNEYG----TEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELL  251 (499)
T ss_pred             HHHHHHHHHHhCCcccccc----hhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999876443    223445555555443333323344556554332 22334667788888899999988


Q ss_pred             HHHHhhhhhhhhhhhhcCCCCCCCchhHHHHHHhhccCccccCCCCHHHHHHHHHHHHHhcccchhhHHHHHHHHHhcCc
Q 009312          274 EQYRNKDFVIEGEERAGNNIEGSRNKDFLQLLLELQDNEDSANSISMNQFKALLVDIITGGTDTTTTMVEWTMAELMQHP  353 (538)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p  353 (538)
                      +++++..      .      ......|+++.+++..++...+..+++++|.+++.++++||+|||+++++|++++|++||
T Consensus       252 ~~~~~~~------~------~~~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P  319 (499)
T PLN03234        252 DETLDPN------R------PKQETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYP  319 (499)
T ss_pred             HHHHhhc------c------cCCCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCH
Confidence            8765432      0      012356899999876543222346899999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCCccccccCCCchhHHHHHhhhccCCCCCcCcccccccCcccccCeecCCCCEEEeehhhhhcC
Q 009312          354 LVTKKVHEELAEVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPAQPLLVPHRASESSSIGGYTIPKDTTLMLNVWAIHRD  433 (538)
Q Consensus       354 ~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d  433 (538)
                      ++|+|+|+|++++++..+.++++++++|||++|||+||||++|++|+.++|.+.+|++++||.||||+.|.++++.+|||
T Consensus       320 ~v~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd  399 (499)
T PLN03234        320 EAMKKAQDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRD  399 (499)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCC
Confidence            99999999999999877778999999999999999999999999998768999999999999999999999999999999


Q ss_pred             CCCC-CCCCCCCCCcccCCCCCCccccCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHhhceeecCCCC---CCcc
Q 009312          434 PRLW-DNPLEFRPERFLNDGIASKFDYSGKNFQYLPFGSGRRKCAGIALAERLLMFVLASFLHSFEWKLPVGT---KLDL  509 (538)
Q Consensus       434 p~~~-~dp~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~---~~~~  509 (538)
                      |++| +||++||||||++++.+.  ..+.....|+|||+|+|.|+|++||++|+++++++|+++|+|+++++.   .+..
T Consensus       400 ~~~~~~~P~~F~PeR~l~~~~~~--~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~  477 (499)
T PLN03234        400 TAAWGDNPNEFIPERFMKEHKGV--DFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKM  477 (499)
T ss_pred             cccccCChhhcCchhhcCCCCCc--CcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCc
Confidence            9999 899999999999743221  112345689999999999999999999999999999999999988762   2344


Q ss_pred             CcCcCceeccCCCeeeeeccC
Q 009312          510 SEKYGFVTKKKEPLVAIPTPR  530 (538)
Q Consensus       510 ~~~~~~~~~~~~~~~~~~~~r  530 (538)
                      ....+++..+++++.+.+++|
T Consensus       478 ~~~~~~~~~~~~~~~~~~~~~  498 (499)
T PLN03234        478 DVMTGLAMHKKEHLVLAPTKH  498 (499)
T ss_pred             ccccccccccCCCeEEEeecC
Confidence            455677788888999888887


No 6  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=4.4e-78  Score=606.59  Aligned_cols=498  Identities=31%  Similarity=0.609  Sum_probs=388.9

Q ss_pred             HHHHHHHHHHHHHHhh-hccCCCCCCCCCCCCCCcccccccCCCCCChhHHHHHHHHhhCCeEEEeccCeeEEEecCHHH
Q 009312           17 TCLVAVVAVVYFAWNV-NKSSKANAKLPPGQRGLPVVGYLPFLGTTDLHKTFNDLSGVYGPIFKLWFGNKLCVVVSSPSL   95 (538)
Q Consensus        17 ~~l~~~~~~~~~~~~~-~~~~~~~~~~~pgp~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~v~~~~~~~v~v~dp~~   95 (538)
                      .++++++++.++.|++ .++.+++.+.||||+++|++||++.+ ..+++.++.+++++||++|++++++.++++++||++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~pl~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~   85 (514)
T PLN03112          7 SLLFSVLIFNVLIWRWLNASMRKSLRLPPGPPRWPIVGNLLQL-GPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPEL   85 (514)
T ss_pred             HHHHHHHHHHHHHHHHccccccCCCCCccCCCCCCeeeeHHhc-CCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHH
Confidence            3333334444434444 34455666889999999999999887 467889999999999999999999999999999999


Q ss_pred             HHHHHHhCCccccCCCcccccchhccCCCceecCCCChhhHHHHhhhhhhcCchhhHHHhHHHHHHHHHHHHHHHHhhcc
Q 009312           96 VKQVVHDQDLTFSNRSPSIAGLVTTYGGNDIALSNYGSQWRKLRKLFVGKLMSNTSLDACYALRKQEVKNTIRDLYNSDR  175 (538)
Q Consensus        96 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~  175 (538)
                      +++|+.++...|..++.........++..+++++.+|+.|+++|+.+..++|+...++.+.+.+.++++.+++.+.+...
T Consensus        86 ~~~vl~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~  165 (514)
T PLN03112         86 IREILLRQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQ  165 (514)
T ss_pred             HHHHHHhCCcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhc
Confidence            99999887777776654322222222223445667799999999997678999999999999999999999998875433


Q ss_pred             ccCCCCCCCccchHHhHHHHHHHHHHHhhhccchhhhccccchhHHHHHHHHHHHHHhhCCcccccccccccccchhhHH
Q 009312          176 DNIGNGSGNPIDIGELSNSTLVCVMKNMLWGEALELREKGITNLGAELKFKFAEFMVLLGTPNISDIFPVLSWLDIQGIE  255 (538)
Q Consensus       176 ~~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~  255 (538)
                            ++.++|+.+.++.+++++++.++||.++.............+...+..+........+...+|++++++..+..
T Consensus       166 ------~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  239 (514)
T PLN03112        166 ------TGKPVNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCE  239 (514)
T ss_pred             ------cCCeeeHHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHH
Confidence                  56689999999999999999999999874332110022244555555554433322334456766655333344


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhcCCCCCCCchhHHHHHHhhccCccccCCCCHHHHHHHHHHHHHhcc
Q 009312          256 RRAQKISLWLEDVINSTVEQYRNKDFVIEGEERAGNNIEGSRNKDFLQLLLELQDNEDSANSISMNQFKALLVDIITGGT  335 (538)
Q Consensus       256 ~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~  335 (538)
                      ++.++..+.+.+++...++++++....    +     .......|+++.++++.+++ ....++++++.+++.++++||+
T Consensus       240 ~~~~~~~~~~~~~~~~~i~~~~~~~~~----~-----~~~~~~~d~l~~ll~~~~~~-~~~~l~~~~i~~~~~~~~~AG~  309 (514)
T PLN03112        240 KKMREVEKRVDEFHDKIIDEHRRARSG----K-----LPGGKDMDFVDVLLSLPGEN-GKEHMDDVEIKALMQDMIAAAT  309 (514)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcc----c-----ccCCccchHHHHHHHhhccc-cccCCCHHHHHHHHHHHhcccc
Confidence            666777778888888888876654310    0     00123469999999865331 2235899999999999999999


Q ss_pred             cchhhHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCccccccCCCchhHHHHHhhhccCCCCCcCcccccccCcccccCe
Q 009312          336 DTTTTMVEWTMAELMQHPLVTKKVHEELAEVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPAQPLLVPHRASESSSIGGY  415 (538)
Q Consensus       336 ~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~  415 (538)
                      |||+.+++|++++|++||++|+|+|+||+++++..+.++++++++|||++|||+||||++|++|..++|.+.+|++++||
T Consensus       310 dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~  389 (514)
T PLN03112        310 DTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGY  389 (514)
T ss_pred             ccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCE
Confidence            99999999999999999999999999999999877778999999999999999999999999998778999999999999


Q ss_pred             ecCCCCEEEeehhhhhcCCCCCCCCCCCCCCcccCCCCCCccccCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHh
Q 009312          416 TIPKDTTLMLNVWAIHRDPRLWDNPLEFRPERFLNDGIASKFDYSGKNFQYLPFGSGRRKCAGIALAERLLMFVLASFLH  495 (538)
Q Consensus       416 ~ip~G~~v~~~~~~~~~dp~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~  495 (538)
                      .||||+.|.++++.+||||++|+||++||||||...+.............|+|||+|+|.|||++||++|++++++++|+
T Consensus       390 ~IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~  469 (514)
T PLN03112        390 YIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFH  469 (514)
T ss_pred             EeCCCCEEEEehHHhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999875321111111123467999999999999999999999999999999


Q ss_pred             hceeecCCCC---CCccCcCcCceeccCCCeeeeeccCC
Q 009312          496 SFEWKLPVGT---KLDLSEKYGFVTKKKEPLVAIPTPRL  531 (538)
Q Consensus       496 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~r~  531 (538)
                      +|+|+++++.   +.+....+++++++.++++++++||+
T Consensus       470 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  508 (514)
T PLN03112        470 CFDWSPPDGLRPEDIDTQEVYGMTMPKAKPLRAVATPRL  508 (514)
T ss_pred             heeeecCCCCCcccCCCccccCcccccCCCeEEEeecCC
Confidence            9999987653   23334455777788889999999997


No 7  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=4.9e-78  Score=600.87  Aligned_cols=476  Identities=35%  Similarity=0.707  Sum_probs=383.5

Q ss_pred             CCCCCCCCCCCCCCcccccccCCCCCChhHHHHHHHHhhCCeEEEeccCeeEEEecCHHHHHHHHHhCCccccCCCcccc
Q 009312           36 SKANAKLPPGQRGLPVVGYLPFLGTTDLHKTFNDLSGVYGPIFKLWFGNKLCVVVSSPSLVKQVVHDQDLTFSNRSPSIA  115 (538)
Q Consensus        36 ~~~~~~~~pgp~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~v~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~  115 (538)
                      ...+.+.||||+++|++||++.+ ..+++.++.+++++||+||++++|++++|+|+||+++++++.++...|..++....
T Consensus        26 ~~~~~~~pPgp~~~Pl~G~l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~  104 (504)
T PLN00110         26 PKPSRKLPPGPRGWPLLGALPLL-GNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAG  104 (504)
T ss_pred             hcccCCCcccCCCCCeeechhhc-CCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccc
Confidence            34455779999999999999877 45678999999999999999999999999999999999999987777777665432


Q ss_pred             cchhccCCCceecCCCChhhHHHHhhhhhhcCchhhHHHhHHHHHHHHHHHHHHHHhhccccCCCCCCCccchHHhHHHH
Q 009312          116 GLVTTYGGNDIALSNYGSQWRKLRKLFVGKLMSNTSLDACYALRKQEVKNTIRDLYNSDRDNIGNGSGNPIDIGELSNST  195 (538)
Q Consensus       116 ~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~vdl~~~~~~~  195 (538)
                      ......++.+.+++.+|+.|+++|+.+..++|++..++.+.+.+.+++..+++.+.+...      ++.++|+.+++..+
T Consensus       105 ~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~------~g~~~~~~~~~~~~  178 (504)
T PLN00110        105 ATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQ------RGEPVVVPEMLTFS  178 (504)
T ss_pred             hhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhcc------CCCcEeHHHHHHHH
Confidence            222222334566777899999999999656899999999999999999999999876433      56689999999999


Q ss_pred             HHHHHHHhhhccchhhhccccchhHHHHHHHHHHHHHhhCCcccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 009312          196 LVCVMKNMLWGEALELREKGITNLGAELKFKFAEFMVLLGTPNISDIFPVLSWLDIQGIERRAQKISLWLEDVINSTVEQ  275 (538)
Q Consensus       196 ~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~l~~~~~~~i~~  275 (538)
                      ++|+|+.++||.++.....   .....+...+...+...........+|++.|++..+..+...+..+.+.+++.+.+++
T Consensus       179 ~~~vi~~~~fg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~  255 (504)
T PLN00110        179 MANMIGQVILSRRVFETKG---SESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEE  255 (504)
T ss_pred             HHHHHHHHHhCCcccccCc---hhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998621111   1224455555555443333333456676666543334455666777788888888877


Q ss_pred             HHhhhhhhhhhhhhcCCCCCCCchhHHHHHHhhccCccccCCCCHHHHHHHHHHHHHhcccchhhHHHHHHHHHhcCchH
Q 009312          276 YRNKDFVIEGEERAGNNIEGSRNKDFLQLLLELQDNEDSANSISMNQFKALLVDIITGGTDTTTTMVEWTMAELMQHPLV  355 (538)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~  355 (538)
                      +++..      +      ......|+++.+++..+. ..+..++++++.+++.++++||+|||+.+++|++++|++||++
T Consensus       256 ~~~~~------~------~~~~~~d~l~~ll~~~~~-~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~  322 (504)
T PLN00110        256 HTASA------H------ERKGNPDFLDVVMANQEN-STGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSI  322 (504)
T ss_pred             HHhhc------c------ccccCCChhhHHhhcccc-cCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHH
Confidence            65432      1      012346899999975432 1245699999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCccccccCCCchhHHHHHhhhccCCCCCcCcccccccCcccccCeecCCCCEEEeehhhhhcCCC
Q 009312          356 TKKVHEELAEVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPAQPLLVPHRASESSSIGGYTIPKDTTLMLNVWAIHRDPR  435 (538)
Q Consensus       356 ~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~dp~  435 (538)
                      |+|+++|++++++.++.++++++++|||++|||+||||++|++|+.++|.+.+|++++||.||||+.|.++++.+||||+
T Consensus       323 ~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~  402 (504)
T PLN00110        323 LKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPD  402 (504)
T ss_pred             HHHHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChh
Confidence            99999999999987777899999999999999999999999999878999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcccCCCCCCccccCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHhhceeecCCCCCCccCcCcCc
Q 009312          436 LWDNPLEFRPERFLNDGIASKFDYSGKNFQYLPFGSGRRKCAGIALAERLLMFVLASFLHSFEWKLPVGTKLDLSEKYGF  515 (538)
Q Consensus       436 ~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~  515 (538)
                      +|+||++|+||||++.+.... ........|+|||+|+|.|+|++||+.|+++++++++++|++++.++.+.+.....++
T Consensus       403 ~~~dP~~F~PeRfl~~~~~~~-~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~  481 (504)
T PLN00110        403 VWENPEEFRPERFLSEKNAKI-DPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVELNMDEAFGL  481 (504)
T ss_pred             hcCCcccCCcccccCCCCccc-ccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCccCccccccc
Confidence            999999999999996322111 1111235799999999999999999999999999999999999987765544445677


Q ss_pred             eeccCCCeeeeeccCCCCCC
Q 009312          516 VTKKKEPLVAIPTPRLPNSE  535 (538)
Q Consensus       516 ~~~~~~~~~~~~~~r~~~~~  535 (538)
                      ++.++.++.+++++|++.|.
T Consensus       482 ~~~~~~~~~~~~~~r~~~~~  501 (504)
T PLN00110        482 ALQKAVPLSAMVTPRLHQSA  501 (504)
T ss_pred             ccccCCCceEeeccCCCchh
Confidence            88899999999999986553


No 8  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=2.5e-77  Score=599.62  Aligned_cols=469  Identities=36%  Similarity=0.681  Sum_probs=366.2

Q ss_pred             CCCCCCCCCCCCCcccccccCCCCCChhHHHHHHHHhhCCeEEEeccCeeEEEecCHHHHHHHHHhCCccccCCCccccc
Q 009312           37 KANAKLPPGQRGLPVVGYLPFLGTTDLHKTFNDLSGVYGPIFKLWFGNKLCVVVSSPSLVKQVVHDQDLTFSNRSPSIAG  116 (538)
Q Consensus        37 ~~~~~~~pgp~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~v~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~  116 (538)
                      +++.+.||||+++|++|+++.+ ....+.++.+++++||++|++++|+.++|+|+||+++++|+.++...|..++.....
T Consensus        32 ~~~~~~ppgp~~~Pl~G~l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~  110 (516)
T PLN02183         32 RRRLPYPPGPKGLPIIGNMLMM-DQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAI  110 (516)
T ss_pred             cCCCCCCcCCCCCCeeccHHhc-CCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccch
Confidence            3455789999999999999876 345677899999999999999999999999999999999999877677666543222


Q ss_pred             chhccCCCceecCCCChhhHHHHhhhhhhcCchhhHHHhHHHHHHHHHHHHHHHHhhccccCCCCCCCccchHHhHHHHH
Q 009312          117 LVTTYGGNDIALSNYGSQWRKLRKLFVGKLMSNTSLDACYALRKQEVKNTIRDLYNSDRDNIGNGSGNPIDIGELSNSTL  196 (538)
Q Consensus       117 ~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~vdl~~~~~~~~  196 (538)
                      ......+.+.+++.+|+.|+++|+.++.++|+...++.+.+. .+++..+++.+...        .+.++|+.+++..++
T Consensus       111 ~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~~--------~~~~v~~~~~~~~~~  181 (516)
T PLN02183        111 SYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSSN--------IGKPVNIGELIFTLT  181 (516)
T ss_pred             hccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHhc--------CCCcEeHHHHHHHHH
Confidence            212112235567778999999999965789999999888875 46788899888531        466899999999999


Q ss_pred             HHHHHHhhhccchhhhccccchhHHHHHHHHHHHHHhhCCcccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 009312          197 VCVMKNMLWGEALELREKGITNLGAELKFKFAEFMVLLGTPNISDIFPVLSWLDIQGIERRAQKISLWLEDVINSTVEQY  276 (538)
Q Consensus       197 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~  276 (538)
                      +|+++.++||.+.+...       ..+.+.+...............+|++.++......++..+..+.+.+++.+.++++
T Consensus       182 ~~vi~~~~fG~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  254 (516)
T PLN02183        182 RNITYRAAFGSSSNEGQ-------DEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDH  254 (516)
T ss_pred             HHHHHhHhhcCcccchH-------HHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999998764321       23444444444433333344566776655222334566667778888888888776


Q ss_pred             HhhhhhhhhhhhhcCCCCCCCchhHHHHHHhhccCcc---------ccCCCCHHHHHHHHHHHHHhcccchhhHHHHHHH
Q 009312          277 RNKDFVIEGEERAGNNIEGSRNKDFLQLLLELQDNED---------SANSISMNQFKALLVDIITGGTDTTTTMVEWTMA  347 (538)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~---------~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~  347 (538)
                      .+.....   +  ..+.......|+++.+++..+++.         .+..++++++.+++.++++||+|||+.+++|+++
T Consensus       255 ~~~~~~~---~--~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~  329 (516)
T PLN02183        255 IQKRKNQ---N--ADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMA  329 (516)
T ss_pred             HHhhccc---c--cccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHH
Confidence            6533100   0  000001134689999997543211         1235899999999999999999999999999999


Q ss_pred             HHhcCchHHHHHHHHHHHHhcCCCccccccCCCchhHHHHHhhhccCCCCCcCcccccccCcccccCeecCCCCEEEeeh
Q 009312          348 ELMQHPLVTKKVHEELAEVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPAQPLLVPHRASESSSIGGYTIPKDTTLMLNV  427 (538)
Q Consensus       348 ~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~  427 (538)
                      +|++||++|+|+++|++++++.++.++.+++++||||+|||+||||++|++|+. .|.+.+|++++||.||||+.|.+++
T Consensus       330 ~La~~Pevq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~-~r~~~~d~~l~g~~IPkGt~V~~~~  408 (516)
T PLN02183        330 ELMKSPEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLL-LHETAEDAEVAGYFIPKRSRVMINA  408 (516)
T ss_pred             HHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccce-eeeccCceeECCEEECCCCEEEEeh
Confidence            999999999999999999998666788999999999999999999999999985 6999999999999999999999999


Q ss_pred             hhhhcCCCCCCCCCCCCCCcccCCCCCCccccCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHhhceeecCCCCC-
Q 009312          428 WAIHRDPRLWDNPLEFRPERFLNDGIASKFDYSGKNFQYLPFGSGRRKCAGIALAERLLMFVLASFLHSFEWKLPVGTK-  506 (538)
Q Consensus       428 ~~~~~dp~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~-  506 (538)
                      +.+||||++|+||++|+||||++++...   ...+.+.|+|||+|+|.|+|++||++|+++++|+|+++|++++.++.. 
T Consensus       409 ~~~hrd~~~~~dP~~F~PeRfl~~~~~~---~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~  485 (516)
T PLN02183        409 WAIGRDKNSWEDPDTFKPSRFLKPGVPD---FKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKP  485 (516)
T ss_pred             hhhcCCccccCCccccCchhhCCCCCcc---ccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCC
Confidence            9999999999999999999999733211   112456899999999999999999999999999999999999877643 


Q ss_pred             --CccCcCcCceeccCCCeeeeeccCC
Q 009312          507 --LDLSEKYGFVTKKKEPLVAIPTPRL  531 (538)
Q Consensus       507 --~~~~~~~~~~~~~~~~~~~~~~~r~  531 (538)
                        .+....++.+.++..++.+.+++|.
T Consensus       486 ~~~~~~~~~~~~~~~~~~~~~~~~~r~  512 (516)
T PLN02183        486 SELDMNDVFGLTAPRATRLVAVPTYRL  512 (516)
T ss_pred             CCCChhhccccccccCCCcEEEeecCC
Confidence              2222234555556668889999884


No 9  
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=5.4e-77  Score=594.36  Aligned_cols=458  Identities=25%  Similarity=0.398  Sum_probs=359.7

Q ss_pred             CCCCCCCCCCCCCCcccccccCCCCCChhHHHHHHHHhhCCeEEEeccCeeEEEecCHHHHHHHHHhCCccccCCCcccc
Q 009312           36 SKANAKLPPGQRGLPVVGYLPFLGTTDLHKTFNDLSGVYGPIFKLWFGNKLCVVVSSPSLVKQVVHDQDLTFSNRSPSIA  115 (538)
Q Consensus        36 ~~~~~~~~pgp~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~v~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~  115 (538)
                      .+...+.+|||+++|++||++.+ ..+++..+.+++++||++|++++|+.++|+++||+++++|+.++...|..++....
T Consensus        24 ~~~~~~~~pgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~  102 (482)
T PTZ00404         24 KKIHKNELKGPIPIPILGNLHQL-GNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPS  102 (482)
T ss_pred             hhccCCCCCCCCCCCeeccHhhh-cccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcce
Confidence            34556779999999999999887 45789999999999999999999999999999999999999887656665543322


Q ss_pred             cchhccCCCceecCCCChhhHHHHhhhhhhcCchhhHHHhHHHHHHHHHHHHHHHHhhccccCCCCCCCccchHHhHHHH
Q 009312          116 GLVTTYGGNDIALSNYGSQWRKLRKLFVGKLMSNTSLDACYALRKQEVKNTIRDLYNSDRDNIGNGSGNPIDIGELSNST  195 (538)
Q Consensus       116 ~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~vdl~~~~~~~  195 (538)
                      ... ...+.+++ +.+|+.|+++|+.+ .+.|+...++.+.+.+.+.+..+++.+.+...      .+..+|+.+++..+
T Consensus       103 ~~~-~~~~~~l~-~~~g~~w~~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~------~~~~vd~~~~~~~~  173 (482)
T PTZ00404        103 IKH-GTFYHGIV-TSSGEYWKRNREIV-GKAMRKTNLKHIYDLLDDQVDVLIESMKKIES------SGETFEPRYYLTKF  173 (482)
T ss_pred             eee-eccCCcee-ccChHHHHHHHHHH-HHHHhhhccccHHHHHHHHHHHHHHHHHHHHh------cCCccCHHHHHHHH
Confidence            211 11245554 55799999999998 69999999999999999999999999976433      56679999999999


Q ss_pred             HHHHHHHhhhccchhhhccccchhHHHHHHHHHHHHHhhCCcccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 009312          196 LVCVMKNMLWGEALELREKGITNLGAELKFKFAEFMVLLGTPNISDIFPVLSWLDIQGIERRAQKISLWLEDVINSTVEQ  275 (538)
Q Consensus       196 ~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~l~~~~~~~i~~  275 (538)
                      ++|+++.++||.+++..+.........+...+...+.......+...++++..+ .....+...+..+.+.+++.+.+++
T Consensus       174 ~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~  252 (482)
T PTZ00404        174 TMSAMFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPL-YYQYLEHTDKNFKKIKKFIKEKYHE  252 (482)
T ss_pred             HHHHHHHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhh-hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999876532110112244555555555443332222223332221 1111122334555666666666655


Q ss_pred             HHhhhhhhhhhhhhcCCCCCCCchhHHHHHHhhccCccccCCCCHHHHHHHHHHHHHhcccchhhHHHHHHHHHhcCchH
Q 009312          276 YRNKDFVIEGEERAGNNIEGSRNKDFLQLLLELQDNEDSANSISMNQFKALLVDIITGGTDTTTTMVEWTMAELMQHPLV  355 (538)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~  355 (538)
                      +++..      +       .....|+++.++++.++   ......+++++++.++++||+|||+.+++|++++|++||++
T Consensus       253 ~~~~~------~-------~~~~~dll~~ll~~~~~---~~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~v  316 (482)
T PTZ00404        253 HLKTI------D-------PEVPRDLLDLLIKEYGT---NTDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEI  316 (482)
T ss_pred             HHHcc------C-------CCCcccHHHHHHHHhcc---CCcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHH
Confidence            44321      0       12346899999986432   11223345889999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCccccccCCCchhHHHHHhhhccCCCCCcCcccccccCcccc-cCeecCCCCEEEeehhhhhcCC
Q 009312          356 TKKVHEELAEVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPAQPLLVPHRASESSSI-GGYTIPKDTTLMLNVWAIHRDP  434 (538)
Q Consensus       356 ~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l-~g~~ip~G~~v~~~~~~~~~dp  434 (538)
                      |+|+++||+++++....++++++++|||++|||+||||++|++|..++|.+.+|+++ +||.||||+.|.++++++||||
T Consensus       317 q~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp  396 (482)
T PTZ00404        317 QEKAYNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNE  396 (482)
T ss_pred             HHHHHHHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCc
Confidence            999999999999876678999999999999999999999999997678999999999 9999999999999999999999


Q ss_pred             CCCCCCCCCCCCcccCCCCCCccccCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHhhceeecCCCCCCccCcCcC
Q 009312          435 RLWDNPLEFRPERFLNDGIASKFDYSGKNFQYLPFGSGRRKCAGIALAERLLMFVLASFLHSFEWKLPVGTKLDLSEKYG  514 (538)
Q Consensus       435 ~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~  514 (538)
                      ++|+||++||||||+++         .....|+|||+|+|.|+|++||++|+++++++++++|++++.++.+++.....+
T Consensus       397 ~~~~dP~~F~PeRwl~~---------~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~  467 (482)
T PTZ00404        397 KYFENPEQFDPSRFLNP---------DSNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYG  467 (482)
T ss_pred             cccCCccccCccccCCC---------CCCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccc
Confidence            99999999999999862         134679999999999999999999999999999999999987776554444456


Q ss_pred             ceeccCCCeeeeeccC
Q 009312          515 FVTKKKEPLVAIPTPR  530 (538)
Q Consensus       515 ~~~~~~~~~~~~~~~r  530 (538)
                      +++. +.++++++++|
T Consensus       468 ~~~~-~~~~~v~~~~R  482 (482)
T PTZ00404        468 LTLK-PNKFKVLLEKR  482 (482)
T ss_pred             eeec-CCCceeeeecC
Confidence            6666 55799999987


No 10 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=1.3e-76  Score=594.90  Aligned_cols=486  Identities=27%  Similarity=0.494  Sum_probs=371.2

Q ss_pred             ccCCCCCCCCCCCCCCcccccccCCC--CCChhHHHHHHHHhhCCeEEEeccCeeEEEecCHHHHHHHHHhCCccccCCC
Q 009312           34 KSSKANAKLPPGQRGLPVVGYLPFLG--TTDLHKTFNDLSGVYGPIFKLWFGNKLCVVVSSPSLVKQVVHDQDLTFSNRS  111 (538)
Q Consensus        34 ~~~~~~~~~~pgp~~~p~lG~~~~~~--~~~~~~~~~~~~~kyG~v~~v~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~  111 (538)
                      +..++..+.||||+++|++||++.+.  ..+++.++.+++++||++|++++|+.++|+|+||+++++++.++...|..++
T Consensus        28 ~~~~~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp  107 (519)
T PLN00168         28 RGGKKGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRP  107 (519)
T ss_pred             cCCCCCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCC
Confidence            44555667899999999999997653  2357788999999999999999999999999999999999998877787766


Q ss_pred             cccccchhccCCCceecCCCChhhHHHHhhhhhhcCchhhHHHhHHHHHHHHHHHHHHHHhhccccCCCCCCCccchHHh
Q 009312          112 PSIAGLVTTYGGNDIALSNYGSQWRKLRKLFVGKLMSNTSLDACYALRKQEVKNTIRDLYNSDRDNIGNGSGNPIDIGEL  191 (538)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~vdl~~~  191 (538)
                      ........+.++..+.+..+|+.|+++||.++.++|++..++.+.+.+.++++.+++.+.+...      .+..+|+.+.
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~------~~~~v~~~~~  181 (519)
T PLN00168        108 AVASSRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAE------DAAAPRVVET  181 (519)
T ss_pred             cccchhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcC------CCCCcCHHHH
Confidence            5433233332111222236799999999866689999999999999999999999999976432      3456899999


Q ss_pred             HHHHHHHHHHHhhhccchhhhccccchhHHHHHHHHHHHHHhh-CCcccccccccccccchhhHHHHHHHHHHHHHHHHH
Q 009312          192 SNSTLVCVMKNMLWGEALELREKGITNLGAELKFKFAEFMVLL-GTPNISDIFPVLSWLDIQGIERRAQKISLWLEDVIN  270 (538)
Q Consensus       192 ~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~l~~~~~  270 (538)
                      +..+++++++.++||.+++...      ...+........... ....+...+|++.+.......++..+..+.+.+++.
T Consensus       182 ~~~~~~~ii~~~~fG~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~  255 (519)
T PLN00168        182 FQYAMFCLLVLMCFGERLDEPA------VRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFV  255 (519)
T ss_pred             HHHHHHHHHHHHHcCCCcChhh------HHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHH
Confidence            9999999999999999875321      122223333222111 122233455654322112223455567778888888


Q ss_pred             HHHHHHHhhhhhhhhhhhhcCCCCCCCchhHHHHHHhhccCccccCCCCHHHHHHHHHHHHHhcccchhhHHHHHHHHHh
Q 009312          271 STVEQYRNKDFVIEGEERAGNNIEGSRNKDFLQLLLELQDNEDSANSISMNQFKALLVDIITGGTDTTTTMVEWTMAELM  350 (538)
Q Consensus       271 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~  350 (538)
                      +.++++++.....+. .....+.......|+++.|++...++..+..++++++.+++.++++||+|||+.+++|++++|+
T Consensus       256 ~~i~~~~~~~~~~~~-~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~  334 (519)
T PLN00168        256 PLIDARREYKNHLGQ-GGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELV  334 (519)
T ss_pred             HHHHHHHHHhhhccc-cCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence            888877653210000 0000000011246899999976532223356999999999999999999999999999999999


Q ss_pred             cCchHHHHHHHHHHHHhcCC-CccccccCCCchhHHHHHhhhccCCCCCcCcccccccCcccccCeecCCCCEEEeehhh
Q 009312          351 QHPLVTKKVHEELAEVVGMD-SCVEEFHLPKLKYLDAVVKETFRLHPAQPLLVPHRASESSSIGGYTIPKDTTLMLNVWA  429 (538)
Q Consensus       351 ~~p~~~~~lr~Ei~~~~~~~-~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~  429 (538)
                      +||++|+|+++||+++++.+ +.++.+++++||||+|||+||||++|+++..++|.+.+|++++||.||||+.|.++++.
T Consensus       335 ~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~  414 (519)
T PLN00168        335 KNPSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAE  414 (519)
T ss_pred             hCHHHHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHH
Confidence            99999999999999999753 56788999999999999999999999999877999999999999999999999999999


Q ss_pred             hhcCCCCCCCCCCCCCCcccCCCCCCccc-cCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHhhceeecCCCCCCc
Q 009312          430 IHRDPRLWDNPLEFRPERFLNDGIASKFD-YSGKNFQYLPFGSGRRKCAGIALAERLLMFVLASFLHSFEWKLPVGTKLD  508 (538)
Q Consensus       430 ~~~dp~~~~dp~~F~P~R~l~~~~~~~~~-~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~  508 (538)
                      +||||++|+||++|+||||++.+.+.... .......|+|||+|+|.|||++||++|+++++++||++|+|++.++.+++
T Consensus       415 ~~~d~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~  494 (519)
T PLN00168        415 MGRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDEVD  494 (519)
T ss_pred             HhcCccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCcCC
Confidence            99999999999999999999732211100 11234679999999999999999999999999999999999987765554


Q ss_pred             cCcCcCceeccCCCeeeeeccCCC
Q 009312          509 LSEKYGFVTKKKEPLVAIPTPRLP  532 (538)
Q Consensus       509 ~~~~~~~~~~~~~~~~~~~~~r~~  532 (538)
                      .....+++..+.+++++++++|+-
T Consensus       495 ~~~~~~~~~~~~~~~~~~~~~R~~  518 (519)
T PLN00168        495 FAEKREFTTVMAKPLRARLVPRRT  518 (519)
T ss_pred             hhhhceeEEeecCCcEEEEEeccC
Confidence            333345667777789999999973


No 11 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=1e-76  Score=595.62  Aligned_cols=475  Identities=31%  Similarity=0.524  Sum_probs=361.9

Q ss_pred             ccCCCCCCCCCCCCCCcccccccCCCCCChhHHHHHHHHhhCCeEEEeccCeeEEEecCHHHHHHHHHhCCccccCCCcc
Q 009312           34 KSSKANAKLPPGQRGLPVVGYLPFLGTTDLHKTFNDLSGVYGPIFKLWFGNKLCVVVSSPSLVKQVVHDQDLTFSNRSPS  113 (538)
Q Consensus        34 ~~~~~~~~~~pgp~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~v~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~  113 (538)
                      +...++.+.||||+++|++|+++.+.....+..+.+++++||+||++++|+.++|+|+||+++++|+.++...|..++..
T Consensus        23 ~~~~~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~  102 (503)
T PLN02394         23 KLRGKKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRN  102 (503)
T ss_pred             HHhcCcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCc
Confidence            44556778999999999999998874333578899999999999999999999999999999999998876667655433


Q ss_pred             cccchhccCCCceecCCCChhhHHHHhhhhhhcCchhhHHHhHHHHHHHHHHHHHHHHhhccccCCCCCCCccchHHhHH
Q 009312          114 IAGLVTTYGGNDIALSNYGSQWRKLRKLFVGKLMSNTSLDACYALRKQEVKNTIRDLYNSDRDNIGNGSGNPIDIGELSN  193 (538)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~vdl~~~~~  193 (538)
                      .........+.+.+++.+|+.|+++||.+..++|++..++.+.+.+.++++++++.+.+....     .+..+|+.+++.
T Consensus       103 ~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~-----~~~~v~~~~~~~  177 (503)
T PLN02394        103 VVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEA-----ATEGVVIRRRLQ  177 (503)
T ss_pred             chHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhc-----cCCcEecHHHHH
Confidence            322222222345667778999999999985699999999999999999999999998754321     244689999999


Q ss_pred             HHHHHHHHHhhhccchhhhccccchhHHHHHHHHHHHHHhhCC--cccccccccccccchhhHHHHHHHHHHHHHH-HHH
Q 009312          194 STLVCVMKNMLWGEALELREKGITNLGAELKFKFAEFMVLLGT--PNISDIFPVLSWLDIQGIERRAQKISLWLED-VIN  270 (538)
Q Consensus       194 ~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~l~~~~~~~~~~~~~~~l~~-~~~  270 (538)
                      .+++|+++.++||.+++..+.   +....+.............  ..+...+|++.+. .....+........... +..
T Consensus       178 ~~~~dvi~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  253 (503)
T PLN02394        178 LMMYNIMYRMMFDRRFESEDD---PLFLKLKALNGERSRLAQSFEYNYGDFIPILRPF-LRGYLKICQDVKERRLALFKD  253 (503)
T ss_pred             HHHHHHHHHHHhCCCcccccc---hhHHHHHHHHHHHHHHhcccccchhhhchHHHHH-hhHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999875443   2223333333322222211  1122334444322 11111222222222222 233


Q ss_pred             HHHHHHHhhhhhhhhhhhhcCCCCCCCchhHHHHHHhhccCccccCCCCHHHHHHHHHHHHHhcccchhhHHHHHHHHHh
Q 009312          271 STVEQYRNKDFVIEGEERAGNNIEGSRNKDFLQLLLELQDNEDSANSISMNQFKALLVDIITGGTDTTTTMVEWTMAELM  350 (538)
Q Consensus       271 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~  350 (538)
                      ..++++++..      +.  .+.......|+++.|+++.++    +.++++++..++.++++||+|||+.+++|++|+|+
T Consensus       254 ~~i~~~~~~~------~~--~~~~~~~~~d~l~~ll~~~~~----~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~  321 (503)
T PLN02394        254 YFVDERKKLM------SA--KGMDKEGLKCAIDHILEAQKK----GEINEDNVLYIVENINVAAIETTLWSIEWGIAELV  321 (503)
T ss_pred             HHHHHHHHHh------hh--ccCCcchhhhHHHHHHhcccc----CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHH
Confidence            3455544321      00  000112347899999987543    35899999999999999999999999999999999


Q ss_pred             cCchHHHHHHHHHHHHhcCCCccccccCCCchhHHHHHhhhccCCCCCcCcccccccCcccccCeecCCCCEEEeehhhh
Q 009312          351 QHPLVTKKVHEELAEVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPAQPLLVPHRASESSSIGGYTIPKDTTLMLNVWAI  430 (538)
Q Consensus       351 ~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~  430 (538)
                      +||++|+|||+||+++++.++.++++++++||||+|||+||||++|++|+..+|.+.+|++++||.||+|+.|.++++.+
T Consensus       322 ~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~  401 (503)
T PLN02394        322 NHPEIQKKLRDELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWL  401 (503)
T ss_pred             cCHHHHHHHHHHHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHH
Confidence            99999999999999999876678889999999999999999999999999878999999999999999999999999999


Q ss_pred             hcCCCCCCCCCCCCCCcccCCCCCCccccCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHhhceeecCCCCC-Ccc
Q 009312          431 HRDPRLWDNPLEFRPERFLNDGIASKFDYSGKNFQYLPFGSGRRKCAGIALAERLLMFVLASFLHSFEWKLPVGTK-LDL  509 (538)
Q Consensus       431 ~~dp~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~-~~~  509 (538)
                      ||||++|+||++|+||||++++.+..  .......|+|||+|+|.|+|++||++|+++++|+++++|++++.+|.+ ++.
T Consensus       402 ~rd~~~~~~P~~F~PeRwl~~~~~~~--~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~  479 (503)
T PLN02394        402 ANNPELWKNPEEFRPERFLEEEAKVE--ANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDV  479 (503)
T ss_pred             hCCcccCCCccccCccccCCCCCccc--ccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCcc
Confidence            99999999999999999997422111  122356799999999999999999999999999999999999887763 555


Q ss_pred             CcCcC-ceeccCCCeeeeeccCC
Q 009312          510 SEKYG-FVTKKKEPLVAIPTPRL  531 (538)
Q Consensus       510 ~~~~~-~~~~~~~~~~~~~~~r~  531 (538)
                      ....+ +....+.++.+++.+|+
T Consensus       480 ~~~~~~~~~~~~~~~~~~~~~r~  502 (503)
T PLN02394        480 SEKGGQFSLHIAKHSTVVFKPRS  502 (503)
T ss_pred             ccccCceeeccCCCceEEeecCC
Confidence            54454 55546668999999997


No 12 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=1.2e-76  Score=593.30  Aligned_cols=472  Identities=31%  Similarity=0.552  Sum_probs=365.9

Q ss_pred             ccCCCCCCCCCCCCCCcccccccCCCCCChhHHHHHHHHhhCCeEEEeccCeeEEEecCHHHHHHHHHhCCccccCCCcc
Q 009312           34 KSSKANAKLPPGQRGLPVVGYLPFLGTTDLHKTFNDLSGVYGPIFKLWFGNKLCVVVSSPSLVKQVVHDQDLTFSNRSPS  113 (538)
Q Consensus        34 ~~~~~~~~~~pgp~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~v~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~  113 (538)
                      ...++..+.||||+++|++||++.+...++..++.+++++||++|++++++.++|+|+||+++++|+.++...|.+++..
T Consensus        22 ~~~~~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~  101 (502)
T PLN02966         22 KPKTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPH  101 (502)
T ss_pred             ccccCCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCC
Confidence            44555667899999999999998875557889999999999999999999999999999999999999877667655433


Q ss_pred             cccchhccCCCceecCCCChhhHHHHhhhhhhcCchhhHHHhHHHHHHHHHHHHHHHHhhccccCCCCCCCccchHHhHH
Q 009312          114 IAGLVTTYGGNDIALSNYGSQWRKLRKLFVGKLMSNTSLDACYALRKQEVKNTIRDLYNSDRDNIGNGSGNPIDIGELSN  193 (538)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~vdl~~~~~  193 (538)
                      ........+..+..+..+|+.|+++|+.++.++|++..++.+.+.+.+++.++++.+.+...      +++.+|+.+++.
T Consensus       102 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~------~~~~vdl~~~~~  175 (502)
T PLN02966        102 RGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAAD------KSEVVDISELML  175 (502)
T ss_pred             ccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcc------CCCceeHHHHHH
Confidence            22222222333344556799999999996689999999999999999999999999976543      566899999999


Q ss_pred             HHHHHHHHHhhhccchhhhccccchhHHHHHHHHHHHHHhhCCcccccccccccccc-hhhHHHHHHHHHHHHHHHHHHH
Q 009312          194 STLVCVMKNMLWGEALELREKGITNLGAELKFKFAEFMVLLGTPNISDIFPVLSWLD-IQGIERRAQKISLWLEDVINST  272 (538)
Q Consensus       194 ~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~-~~~~~~~~~~~~~~l~~~~~~~  272 (538)
                      .+++|+|+.++||.+++..+.    ....+.+.+...........+...+|++..++ +.+..+......+...+++.+.
T Consensus       176 ~~t~dvi~~~~fG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (502)
T PLN02966        176 TFTNSVVCRQAFGKKYNEDGE----EMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEV  251 (502)
T ss_pred             HHHHHHHHHHHhCCccCccch----HHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998865432    23445555555444433333334455433221 1122233334455566666666


Q ss_pred             HHHHHhhhhhhhhhhhhcCCCCCCCchhHHHHHHhhccCccccCCCCHHHHHHHHHHHHHhcccchhhHHHHHHHHHhcC
Q 009312          273 VEQYRNKDFVIEGEERAGNNIEGSRNKDFLQLLLELQDNEDSANSISMNQFKALLVDIITGGTDTTTTMVEWTMAELMQH  352 (538)
Q Consensus       273 i~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~  352 (538)
                      ++++....            .......|+++.+++..++...+..++++++.+++.++++||+|||+.+++|++|+|++|
T Consensus       252 i~~~~~~~------------~~~~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~  319 (502)
T PLN02966        252 VNETLDPK------------RVKPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKY  319 (502)
T ss_pred             HHHHHhcc------------ccccccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhC
Confidence            66543321            001224689999997654422234689999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHHhcCC--CccccccCCCchhHHHHHhhhccCCCCCcCcccccccCcccccCeecCCCCEEEeehhhh
Q 009312          353 PLVTKKVHEELAEVVGMD--SCVEEFHLPKLKYLDAVVKETFRLHPAQPLLVPHRASESSSIGGYTIPKDTTLMLNVWAI  430 (538)
Q Consensus       353 p~~~~~lr~Ei~~~~~~~--~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~  430 (538)
                      |++|+|+++||+++++.+  +.++++++++||||+|||+||||++|++|+.++|.+.+|++++||.||+||.|.++++.+
T Consensus       320 P~~q~kl~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~  399 (502)
T PLN02966        320 PQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAV  399 (502)
T ss_pred             HHHHHHHHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccc
Confidence            999999999999998742  357889999999999999999999999998778999999999999999999999999999


Q ss_pred             hcCCCCC-CCCCCCCCCcccCCCCCCccccCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHhhceeecCCCCC---
Q 009312          431 HRDPRLW-DNPLEFRPERFLNDGIASKFDYSGKNFQYLPFGSGRRKCAGIALAERLLMFVLASFLHSFEWKLPVGTK---  506 (538)
Q Consensus       431 ~~dp~~~-~dp~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~---  506 (538)
                      ||||++| |||++|+||||++++..    ....+..|+|||+|+|.|+|++||++|+++++|++|++|+|++.++.+   
T Consensus       400 ~rdp~~~g~dP~~F~PeRwl~~~~~----~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~  475 (502)
T PLN02966        400 SRDEKEWGPNPDEFRPERFLEKEVD----FKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDD  475 (502)
T ss_pred             cCCcccccCChhhCChhhhcCCCCC----cCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCccc
Confidence            9999999 99999999999963211    112456799999999999999999999999999999999999887742   


Q ss_pred             CccCcCcCceeccCCCeeeeeccCCCC
Q 009312          507 LDLSEKYGFVTKKKEPLVAIPTPRLPN  533 (538)
Q Consensus       507 ~~~~~~~~~~~~~~~~~~~~~~~r~~~  533 (538)
                      ++.+...+++..++.+++  +++|+-|
T Consensus       476 ~~~~~~~~~~~~~~~~~~--~~~~~~~  500 (502)
T PLN02966        476 INMDVMTGLAMHKSQHLK--LVPEKVN  500 (502)
T ss_pred             CCcccccCeeeccCCCeE--EEEEeCC
Confidence            333444566654554554  5555443


No 13 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=7.5e-75  Score=574.75  Aligned_cols=461  Identities=28%  Similarity=0.470  Sum_probs=365.0

Q ss_pred             CCCCCCCcccccccCCCCCChhHHHHHHHHhhCCeEEEeccCeeEEEecCHHHHHHHHHhCCccccCCCcccccchhccC
Q 009312           43 PPGQRGLPVVGYLPFLGTTDLHKTFNDLSGVYGPIFKLWFGNKLCVVVSSPSLVKQVVHDQDLTFSNRSPSIAGLVTTYG  122 (538)
Q Consensus        43 ~pgp~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~v~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  122 (538)
                      ||||+++|++||++.+...+++.++.+++++||++|++++|++++|+|+||+++++|+.++...|..++.......+...
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            78999999999998885556899999999999999999999999999999999999999887777766533222222211


Q ss_pred             CCceecCCCChhhHHHHhhhhhhcCchhhHHHhHHHHHHHHHHHHHHHHhhccccCCCCCCCccchHHhHHHHHHHHHHH
Q 009312          123 GNDIALSNYGSQWRKLRKLFVGKLMSNTSLDACYALRKQEVKNTIRDLYNSDRDNIGNGSGNPIDIGELSNSTLVCVMKN  202 (538)
Q Consensus       123 ~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~vdl~~~~~~~~~~~i~~  202 (538)
                      +..+.+..+|+.|+++|+.+.+++++...++.+.+.+.+.++.+++.+.+.....    .++.||+.+.++.+++|+++.
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~vd~~~~~~~~t~dvi~~  156 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDD----PHSPVNFRDVFENELFGLSLI  156 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhcccc----CCCceeHHHHHHHHHHHHHHH
Confidence            2234444568999999998878899988888899988888888888886543311    356799999999999999999


Q ss_pred             hhhccchhhhccc-cchh---HHHHHHHHHHHHHhhCCcccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009312          203 MLWGEALELREKG-ITNL---GAELKFKFAEFMVLLGTPNISDIFPVLSWLDIQGIERRAQKISLWLEDVINSTVEQYRN  278 (538)
Q Consensus       203 ~~fG~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~~~  278 (538)
                      ++||.+++..... ....   ...+...+...+.......+...+|.+++++.....+...+....+.+++++.++++++
T Consensus       157 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  236 (466)
T PLN02655        157 QALGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKK  236 (466)
T ss_pred             HHhccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999987654321 1010   01223333334333333334456777776653333344444445556777777776665


Q ss_pred             hhhhhhhhhhhcCCCCCCCchhHHHHHHhhccCccccCCCCHHHHHHHHHHHHHhcccchhhHHHHHHHHHhcCchHHHH
Q 009312          279 KDFVIEGEERAGNNIEGSRNKDFLQLLLELQDNEDSANSISMNQFKALLVDIITGGTDTTTTMVEWTMAELMQHPLVTKK  358 (538)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~  358 (538)
                      ..      .      ......|+++.+++..      ..++++++.+++.++++||+|||+.+++|++++|++||++|+|
T Consensus       237 ~~------~------~~~~~~d~l~~ll~~~------~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~  298 (466)
T PLN02655        237 RI------A------RGEERDCYLDFLLSEA------THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQER  298 (466)
T ss_pred             hh------c------CCCCcccHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence            43      1      0122458999999753      2589999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCccccccCCCchhHHHHHhhhccCCCCCcCcccccccCcccccCeecCCCCEEEeehhhhhcCCCCCC
Q 009312          359 VHEELAEVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPAQPLLVPHRASESSSIGGYTIPKDTTLMLNVWAIHRDPRLWD  438 (538)
Q Consensus       359 lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~dp~~~~  438 (538)
                      +|+||+++++.+. ++.+++++||||+|||+||||++|+++...+|.+.+|++++||.||||+.|+++.+++||||++|+
T Consensus       299 l~~Ei~~~~~~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~  377 (466)
T PLN02655        299 LYREIREVCGDER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWE  377 (466)
T ss_pred             HHHHHHHHhCCCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCC
Confidence            9999999998644 899999999999999999999999999877899999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccCCCCCCccccCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHhhceeecCCCCCCccCcCcCceec
Q 009312          439 NPLEFRPERFLNDGIASKFDYSGKNFQYLPFGSGRRKCAGIALAERLLMFVLASFLHSFEWKLPVGTKLDLSEKYGFVTK  518 (538)
Q Consensus       439 dp~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~  518 (538)
                      ||++|+||||++++..     ......++|||+|+|.|||++||+.|+++++++||++|++++.++.+.+ ....++++.
T Consensus       378 ~p~~F~PeR~~~~~~~-----~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~-~~~~~~~~~  451 (466)
T PLN02655        378 NPEEWDPERFLGEKYE-----SADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDEEK-EDTVQLTTQ  451 (466)
T ss_pred             ChhccCccccCCCCcc-----cCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCccc-cchhheeEe
Confidence            9999999999973211     1124679999999999999999999999999999999999987664322 234567788


Q ss_pred             cCCCeeeeeccCCC
Q 009312          519 KKEPLVAIPTPRLP  532 (538)
Q Consensus       519 ~~~~~~~~~~~r~~  532 (538)
                      +++++.+++++|++
T Consensus       452 ~~~~~~~~~~~r~~  465 (466)
T PLN02655        452 KLHPLHAHLKPRGS  465 (466)
T ss_pred             ecCCcEEEEeecCC
Confidence            88999999999975


No 14 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=2.6e-73  Score=567.43  Aligned_cols=480  Identities=27%  Similarity=0.448  Sum_probs=355.5

Q ss_pred             CCCCCCCCCCCcccccccCCCCCCh-hHHHHHHHHhh-CCeEEEeccCeeEEEecCHHHHHHHHHhCCccccCCCccccc
Q 009312           39 NAKLPPGQRGLPVVGYLPFLGTTDL-HKTFNDLSGVY-GPIFKLWFGNKLCVVVSSPSLVKQVVHDQDLTFSNRSPSIAG  116 (538)
Q Consensus        39 ~~~~~pgp~~~p~lG~~~~~~~~~~-~~~~~~~~~ky-G~v~~v~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~  116 (538)
                      ..+.||||+++|++||++.+..+.+ ..++++..++| |+||++++|++++|+|+||+++++++.++...|..++.....
T Consensus        38 ~~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~  117 (534)
T PLN03018         38 SRQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIM  117 (534)
T ss_pred             CCCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhh
Confidence            3457999999999999988743223 24566667766 799999999999999999999999999887778877654333


Q ss_pred             chhccCCCceecCCCChhhHHHHhhhhhhcCchhhHHHhHHHHHHHHHHHHHHHHhhccccCCCCCCCccchHHhHHHHH
Q 009312          117 LVTTYGGNDIALSNYGSQWRKLRKLFVGKLMSNTSLDACYALRKQEVKNTIRDLYNSDRDNIGNGSGNPIDIGELSNSTL  196 (538)
Q Consensus       117 ~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~vdl~~~~~~~~  196 (538)
                      ...+.++.+++++.+|+.|+++|+.+...+++......+...+..++..+++.+.+...      .+.++|+.+++..++
T Consensus       118 ~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~~~vd~~~~~~~~t  191 (534)
T PLN03018        118 ETIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQ------RSETVDVRELSRVYG  191 (534)
T ss_pred             hhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcc------cCCceeHHHHHHHHH
Confidence            32332233566666799999999999544455555555555666678889988875432      445799999999999


Q ss_pred             HHHHHHhhhccchhhhcccc---chhHHHHHHHHHHHHH---hhCCcccccccc-cccccchhhHHHHHHHHHHHHHHHH
Q 009312          197 VCVMKNMLWGEALELREKGI---TNLGAELKFKFAEFMV---LLGTPNISDIFP-VLSWLDIQGIERRAQKISLWLEDVI  269 (538)
Q Consensus       197 ~~~i~~~~fG~~~~~~~~~~---~~~~~~~~~~~~~~~~---~~~~~~~~~~~P-~l~~l~~~~~~~~~~~~~~~l~~~~  269 (538)
                      +|+++.++||.++.......   .+....+...+.....   ..........+| |+++++..+..++.......+.+++
T Consensus       192 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  271 (534)
T PLN03018        192 YAVTMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYN  271 (534)
T ss_pred             HHHHHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHH
Confidence            99999999999875432110   0111111111221111   111111122233 4443322233344555666778888


Q ss_pred             HHHHHHHHhhhhhhhhhhhhcCCCCCCCchhHHHHHHhhccCccccC-CCCHHHHHHHHHHHHHhcccchhhHHHHHHHH
Q 009312          270 NSTVEQYRNKDFVIEGEERAGNNIEGSRNKDFLQLLLELQDNEDSAN-SISMNQFKALLVDIITGGTDTTTTMVEWTMAE  348 (538)
Q Consensus       270 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~-~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~  348 (538)
                      ++.++++++....    +     .......|+++.|++..++  .+. .++++++++++.++++||+|||+.+++|++++
T Consensus       272 ~~~i~~~~~~~~~----~-----~~~~~~~d~l~~ll~~~~~--~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~  340 (534)
T PLN03018        272 NPIIDERVELWRE----K-----GGKAAVEDWLDTFITLKDQ--NGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGE  340 (534)
T ss_pred             HHHHHHHHHHhhh----c-----cCCCCcccHHHHHHHhhcc--cCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            8888877653210    0     0011246899999976543  122 48999999999999999999999999999999


Q ss_pred             HhcCchHHHHHHHHHHHHhcCCCccccccCCCchhHHHHHhhhccCCCCCcCcccccccCcccccCeecCCCCEEEeehh
Q 009312          349 LMQHPLVTKKVHEELAEVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPAQPLLVPHRASESSSIGGYTIPKDTTLMLNVW  428 (538)
Q Consensus       349 L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~  428 (538)
                      |++||++|+|+++||+++++.++.++.+++.+|||++|||+||||++|++|...+|.+.+|++++||.||||+.|+++.+
T Consensus       341 L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~  420 (534)
T PLN03018        341 MLKNPEILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRP  420 (534)
T ss_pred             HHcCHHHHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChH
Confidence            99999999999999999998777788899999999999999999999999987689999999999999999999999999


Q ss_pred             hhhcCCCCCCCCCCCCCCcccCCCCCC-ccccCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHhhceeecCCCC-C
Q 009312          429 AIHRDPRLWDNPLEFRPERFLNDGIAS-KFDYSGKNFQYLPFGSGRRKCAGIALAERLLMFVLASFLHSFEWKLPVGT-K  506 (538)
Q Consensus       429 ~~~~dp~~~~dp~~F~P~R~l~~~~~~-~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~-~  506 (538)
                      ++||||++|+||++|+||||++.+... .......+..|+|||+|+|.|||++||++|+++++++|+++|++++.++. +
T Consensus       421 ~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~  500 (534)
T PLN03018        421 GLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFGP  500 (534)
T ss_pred             HhcCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCCC
Confidence            999999999999999999999632211 00011245679999999999999999999999999999999999987663 4


Q ss_pred             CccCcCcCceeccCCCeeeeeccCCCCCCCC
Q 009312          507 LDLSEKYGFVTKKKEPLVAIPTPRLPNSELY  537 (538)
Q Consensus       507 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~  537 (538)
                      ++.....+.+. .+.++++++++|.+- +++
T Consensus       501 ~~~~~~~~~~~-~p~~~~v~~~~R~~~-~~~  529 (534)
T PLN03018        501 LSLEEDDASLL-MAKPLLLSVEPRLAP-NLY  529 (534)
T ss_pred             CCcccccccee-cCCCeEEEEEecccc-ccc
Confidence            43333334344 456899999999543 554


No 15 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.5e-74  Score=534.14  Aligned_cols=463  Identities=23%  Similarity=0.328  Sum_probs=388.7

Q ss_pred             CCCCCCCCCCCcccccccCC---CCCChhHHHHHHHHhhCCeEEEe-ccCeeEEEecCHHHHHHHHHhCCccccCCC-cc
Q 009312           39 NAKLPPGQRGLPVVGYLPFL---GTTDLHKTFNDLSGVYGPIFKLW-FGNKLCVVVSSPSLVKQVVHDQDLTFSNRS-PS  113 (538)
Q Consensus        39 ~~~~~pgp~~~p~lG~~~~~---~~~~~~~~~~~~~~kyG~v~~v~-~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~-~~  113 (538)
                      +...+|||+++|++|.++.+   ...+.++.....+++||+||+.. +|+...|+|.||++++.+|++++. ++.++ ..
T Consensus        48 ~~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~-~P~Rp~~~  126 (519)
T KOG0159|consen   48 PFEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGK-YPFRPLLI  126 (519)
T ss_pred             ChhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCC-CCCccccc
Confidence            34568999999999998843   34577999999999999999999 899999999999999999999873 34443 11


Q ss_pred             cccch--hccCCCceecCCCChhhHHHHhhhhhhcCchhhHHHhHHHHHHHHHHHHHHHHhhccccCCCCCCCccchHHh
Q 009312          114 IAGLV--TTYGGNDIALSNYGSQWRKLRKLFVGKLMSNTSLDACYALRKQEVKNTIRDLYNSDRDNIGNGSGNPIDIGEL  191 (538)
Q Consensus       114 ~~~~~--~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~vdl~~~  191 (538)
                      .....  -.+++...++...|+.|++.|..++..+++++.++.+.+.+++.+++++..+....+.   ..+..+.|+.+.
T Consensus       127 ~~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~---~~~~~~~D~~~~  203 (519)
T KOG0159|consen  127 EPWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDP---ERGELVPDFAQE  203 (519)
T ss_pred             chhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcc---cccccchhHHHH
Confidence            11111  1223344455667999999999999889999999999999999999999999877542   114567899999


Q ss_pred             HHHHHHHHHHHhhhccchhhhccccchhHHHHHHHHHHHHHhhCCcccccccccccccchhhHHHHHHHHHHHHHHHHHH
Q 009312          192 SNSTLVCVMKNMLWGEALELREKGITNLGAELKFKFAEFMVLLGTPNISDIFPVLSWLDIQGIERRAQKISLWLEDVINS  271 (538)
Q Consensus       192 ~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~l~~~~~~  271 (538)
                      ++.++++.|+.++||.++++.....+++...+.+++..++.......  ...++.+++ .++.++++.++.+.+.+++.+
T Consensus       204 l~~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~--~~p~l~r~~-~t~~wk~~~~~~D~i~~~~~~  280 (519)
T KOG0159|consen  204 LYRWSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLM--LMPSLWRYF-PTKVWKDFVRAWDQIFDVGDK  280 (519)
T ss_pred             HHHHHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHH--hcchHHHhC-CChHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999998877888999999999887654322  122556666 677889999999999999999


Q ss_pred             HHHHHHhhhhhhhhhhhhcCCCCCCCchhHHHHHHhhccCccccCCCCHHHHHHHHHHHHHhcccchhhHHHHHHHHHhc
Q 009312          272 TVEQYRNKDFVIEGEERAGNNIEGSRNKDFLQLLLELQDNEDSANSISMNQFKALLVDIITGGTDTTTTMVEWTMAELMQ  351 (538)
Q Consensus       272 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~  351 (538)
                      +|++..+..+      ...... ......+++.|.+        .+++.+++..+++.++.||.||||.++.|+||.|++
T Consensus       281 ~Id~~l~~l~------~~~~~~-~~~~~~l~~~L~~--------~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~Lar  345 (519)
T KOG0159|consen  281 YIDNALEELE------KQDSAG-SEYTGSLLELLLR--------KELSRKDAKANVMDLLAAGVDTTSNTLLWALYELAR  345 (519)
T ss_pred             HHHHHHHHHH------hccccc-cchhHHHHHHHHH--------ccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhc
Confidence            9999988762      111100 1123344444443        357899999999999999999999999999999999


Q ss_pred             CchHHHHHHHHHHHHhcC-CCccccccCCCchhHHHHHhhhccCCCCCcCcccccccCcccccCeecCCCCEEEeehhhh
Q 009312          352 HPLVTKKVHEELAEVVGM-DSCVEEFHLPKLKYLDAVVKETFRLHPAQPLLVPHRASESSSIGGYTIPKDTTLMLNVWAI  430 (538)
Q Consensus       352 ~p~~~~~lr~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~  430 (538)
                      ||++|++|++|+.++.+. +..++.+++.+||||.||||||+||||++|+ ..|...+|.+++||.|||||.|.++++.+
T Consensus       346 nP~~Q~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~-~~R~l~~D~vL~gY~vPagT~V~l~~~~~  424 (519)
T KOG0159|consen  346 NPEVQQRLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPG-NGRVLPKDLVLSGYHVPAGTLVVLFLYVL  424 (519)
T ss_pred             ChHHHHHHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccc-cccccchhceeccceecCCCeEEEeehhh
Confidence            999999999999999987 5778889999999999999999999999998 57999999999999999999999999999


Q ss_pred             hcCCCCCCCCCCCCCCcccCCCCCCccccCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHhhceeecCCCCCCccC
Q 009312          431 HRDPRLWDNPLEFRPERFLNDGIASKFDYSGKNFQYLPFGSGRRKCAGIALAERLLMFVLASFLHSFEWKLPVGTKLDLS  510 (538)
Q Consensus       431 ~~dp~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~  510 (538)
                      .+||++|++|++|+||||++++.     .+.++..++|||.|+|+|+||+||++|+-+.|+.++++|+++..++.|+.  
T Consensus       425 ~r~~~~F~~p~~F~PeRWL~~~~-----~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~pv~--  497 (519)
T KOG0159|consen  425 GRNPAYFPDPEEFLPERWLKPST-----KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEPVE--  497 (519)
T ss_pred             ccChhhCCCccccChhhhccccc-----CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCCCcc--
Confidence            99999999999999999998542     24578999999999999999999999999999999999999987776655  


Q ss_pred             cCcCceeccCCCeeeeeccCC
Q 009312          511 EKYGFVTKKKEPLVAIPTPRL  531 (538)
Q Consensus       511 ~~~~~~~~~~~~~~~~~~~r~  531 (538)
                      ..+.+++.|..++.+++++|-
T Consensus       498 ~~~~~il~P~~~l~f~f~~r~  518 (519)
T KOG0159|consen  498 YVYRFILVPNRPLRFKFRPRN  518 (519)
T ss_pred             ceeEEEEcCCCCcceeeeeCC
Confidence            557788999999999999984


No 16 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=2.1e-74  Score=569.47  Aligned_cols=459  Identities=28%  Similarity=0.471  Sum_probs=363.3

Q ss_pred             CCCCCCCCCCCcccccccCCCCC--ChhHHHHHHHHhhCCeEEEeccCeeEEEecCHHHHHHHHHhCCccccCCCccccc
Q 009312           39 NAKLPPGQRGLPVVGYLPFLGTT--DLHKTFNDLSGVYGPIFKLWFGNKLCVVVSSPSLVKQVVHDQDLTFSNRSPSIAG  116 (538)
Q Consensus        39 ~~~~~pgp~~~p~lG~~~~~~~~--~~~~~~~~~~~kyG~v~~v~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~  116 (538)
                      ....||||+++|++|++..+...  +...++.++..+||++|+.|+|+.++++++||+.+++|+.++...+...+.....
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            56779999999999999887433  5677889999999999999999999999999999999997554444333322211


Q ss_pred             chhccCCCceecCCCChhhHHHHhhhhhhcCchhhHHHhHHHHHHHHHHHHHHHHhhccccCCCCCCCccchHHhHHHHH
Q 009312          117 LVTTYGGNDIALSNYGSQWRKLRKLFVGKLMSNTSLDACYALRKQEVKNTIRDLYNSDRDNIGNGSGNPIDIGELSNSTL  196 (538)
Q Consensus       117 ~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~vdl~~~~~~~~  196 (538)
                       .....|.|++++. |+.|+++||.+ .+.|+...++.+...+.+....+...+....       .+..+|+.+.+.+++
T Consensus       113 -~~~~lG~gll~~~-g~~W~~~Rk~~-~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~-------~~~~vd~~~~~~~~t  182 (497)
T KOG0157|consen  113 -LKPWLGDGLLFSD-GEKWHKHRKLL-TPAFHFEILKSFVPVFIESSLILLLLLELAA-------SGEEVDLQDLLKRLT  182 (497)
T ss_pred             -HHHHhcCccccCC-chHHHHHHhhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-------cCCeEcHHHHHHHHH
Confidence             1123356777776 99999999998 6999999999999999999888887776632       233399999999999


Q ss_pred             HHHHHHhhhccchhhhccccchhHHHHHHHHHHHHHhhCCcccccccc-cccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 009312          197 VCVMKNMLWGEALELREKGITNLGAELKFKFAEFMVLLGTPNISDIFP-VLSWLDIQGIERRAQKISLWLEDVINSTVEQ  275 (538)
Q Consensus       197 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~l~~~~~~~~~~~~~~~l~~~~~~~i~~  275 (538)
                      +|+|+.++||......+.   +...++.+++......+.   .....| +..++...+..++..++.+.+.++++++|++
T Consensus       183 ld~i~~~~~G~~~~~~~~---~~~~~~~~a~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~  256 (497)
T KOG0157|consen  183 LDIICKTAMGPESLDAEG---PELFEYVQAFDDLTELIS---KRINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRE  256 (497)
T ss_pred             HHHHHHHhcCCccccccC---CcccHHHHHHHHHHHHHH---HHHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999932212122   333455666655443332   222344 4333323335688899999999999999999


Q ss_pred             HHhhhhhhhhhhhhcCCCCCCCchhHHHHHHhhccCccccCCCCHHHHHHHHHHHHHhcccchhhHHHHHHHHHhcCchH
Q 009312          276 YRNKDFVIEGEERAGNNIEGSRNKDFLQLLLELQDNEDSANSISMNQFKALLVDIITGGTDTTTTMVEWTMAELMQHPLV  355 (538)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~  355 (538)
                      +++....      .+... .....|+++.+....+     ..+++++|.+++.+|+|||+||||++++|++++|+.||++
T Consensus       257 rr~~~~~------~~~~~-~~~~~d~L~~~~~~~~-----~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~v  324 (497)
T KOG0157|consen  257 RREELEK------EGSGE-EKKRLDFLDTLLLEED-----KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEV  324 (497)
T ss_pred             HHHHHHh------cCCcc-cchhhhHHHHHHHhcc-----CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHH
Confidence            9876521      00000 2346788886333221     5799999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCcc-ccccCCCchhHHHHHhhhccCCCCCcCcccccccCcccc-cCeecCCCCEEEeehhhhhcC
Q 009312          356 TKKVHEELAEVVGMDSCV-EEFHLPKLKYLDAVVKETFRLHPAQPLLVPHRASESSSI-GGYTIPKDTTLMLNVWAIHRD  433 (538)
Q Consensus       356 ~~~lr~Ei~~~~~~~~~~-~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l-~g~~ip~G~~v~~~~~~~~~d  433 (538)
                      |+|+++|++++++.+... +....++|+||++||+|||||||++|+ +.|.+.+|+++ +||.||||+.|.++++.+|||
T Consensus       325 q~k~~eEi~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~-~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~  403 (497)
T KOG0157|consen  325 QEKLREEVDEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPL-VARKATKDVKLPGGYTIPKGTNVLISIYALHRD  403 (497)
T ss_pred             HHHHHHHHHHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCch-hhcccCCCeEcCCCcEeCCCCEEEEehHHhccC
Confidence            999999999999754332 333333699999999999999999998 68999999999 589999999999999999999


Q ss_pred             CCCCC-CCCCCCCCcccCCCCCCccccCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHhhceeecCCCCCCccCcC
Q 009312          434 PRLWD-NPLEFRPERFLNDGIASKFDYSGKNFQYLPFGSGRRKCAGIALAERLLMFVLASFLHSFEWKLPVGTKLDLSEK  512 (538)
Q Consensus       434 p~~~~-dp~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~  512 (538)
                      |.+|+ ||++||||||+++....    ..++++|+|||+|+|.|+|++||++|||+++++++++|+|++..+..  ....
T Consensus       404 ~~~~~~dp~~F~PeRf~~~~~~~----~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~--~~~~  477 (497)
T KOG0157|consen  404 PRVWGEDPEEFDPERFLDGEEKA----KRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK--PKPV  477 (497)
T ss_pred             ccccCCChhhcCccccCCCCCcC----CCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC--ceee
Confidence            99995 99999999999743322    23578999999999999999999999999999999999999876654  3455


Q ss_pred             cCceeccCCCeeeeeccCCC
Q 009312          513 YGFVTKKKEPLVAIPTPRLP  532 (538)
Q Consensus       513 ~~~~~~~~~~~~~~~~~r~~  532 (538)
                      +..++.++.+++|++++|..
T Consensus       478 ~~~~l~~~~gl~v~~~~r~~  497 (497)
T KOG0157|consen  478 PELTLRPKNGLKVKLRPRGS  497 (497)
T ss_pred             eEEEEEecCCeEEEEEeCCC
Confidence            67899999999999999974


No 17 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=2.1e-74  Score=580.25  Aligned_cols=460  Identities=20%  Similarity=0.322  Sum_probs=356.7

Q ss_pred             CCCCCCCCCCCCCCcccccccCCCC------------------CChhHHHHHHHHhhCCeEEEeccCeeEEEecCHHHHH
Q 009312           36 SKANAKLPPGQRGLPVVGYLPFLGT------------------TDLHKTFNDLSGVYGPIFKLWFGNKLCVVVSSPSLVK   97 (538)
Q Consensus        36 ~~~~~~~~pgp~~~p~lG~~~~~~~------------------~~~~~~~~~~~~kyG~v~~v~~~~~~~v~v~dp~~~~   97 (538)
                      .......||||+++|++||++.+..                  ......+.+++++||++|++++|+.++|+|+||++++
T Consensus        37 ~~~~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~  116 (516)
T PLN02290         37 KIMERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIK  116 (516)
T ss_pred             HHHHHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHH
Confidence            3345677999999999999877621                  1233457889999999999999999999999999999


Q ss_pred             HHHHhCCccccCCCcccccchhccCCCceecCCCChhhHHHHhhhhhhcCchhhHHHhHHHHHHHHHHHHHHHHhhcccc
Q 009312           98 QVVHDQDLTFSNRSPSIAGLVTTYGGNDIALSNYGSQWRKLRKLFVGKLMSNTSLDACYALRKQEVKNTIRDLYNSDRDN  177 (538)
Q Consensus        98 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~  177 (538)
                      +++.++. .+..++...........|.+++ ..+|+.|+++||.+ .+.|+...++.+.+.+.++++.+++.+.+.... 
T Consensus       117 ~il~~~~-~~~~r~~~~~~~~~~~~g~~l~-~~~g~~Wk~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~-  192 (516)
T PLN02290        117 ELLTKYN-TVTGKSWLQQQGTKHFIGRGLL-MANGADWYHQRHIA-APAFMGDRLKGYAGHMVECTKQMLQSLQKAVES-  192 (516)
T ss_pred             HHHhcCC-CCCCCcchhhhHHHHHhcCCcc-ccCchHHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence            9998864 3334432211111112245554 45699999999998 688999999999999999999999999765331 


Q ss_pred             CCCCCCCccchHHhHHHHHHHHHHHhhhccchhhhccccchhHHHHHHHHHHHHHhhCCcccccccccccccchhhHHHH
Q 009312          178 IGNGSGNPIDIGELSNSTLVCVMKNMLWGEALELREKGITNLGAELKFKFAEFMVLLGTPNISDIFPVLSWLDIQGIERR  257 (538)
Q Consensus       178 ~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~  257 (538)
                          ++..+|+.+++..+++|+++.++||.++...+    . .......+.......   .....+|++.+++ .+..+.
T Consensus       193 ----~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~----~-~~~~~~~~~~~~~~~---~~~~~~p~~~~~p-~~~~~~  259 (516)
T PLN02290        193 ----GQTEVEIGEYMTRLTADIISRTEFDSSYEKGK----Q-IFHLLTVLQRLCAQA---TRHLCFPGSRFFP-SKYNRE  259 (516)
T ss_pred             ----CCceEEhHHHHHHHHHHHHHHHHcCCccccch----H-HHHHHHHHHHHHHHh---hhhhcCchhhhCC-ChhHHH
Confidence                33579999999999999999999998875321    1 111112221111111   1112345554443 233455


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhcCCCCCCCchhHHHHHHhhccCc-cccCCCCHHHHHHHHHHHHHhccc
Q 009312          258 AQKISLWLEDVINSTVEQYRNKDFVIEGEERAGNNIEGSRNKDFLQLLLELQDNE-DSANSISMNQFKALLVDIITGGTD  336 (538)
Q Consensus       258 ~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~-~~~~~l~~~~i~~~~~~~~~ag~~  336 (538)
                      ..+..+.+.+++.+.++++++....    .     .......|+++.+++..++. ..+..++++++.+++.++++||+|
T Consensus       260 ~~~~~~~~~~~~~~~i~~~~~~~~~----~-----~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~d  330 (516)
T PLN02290        260 IKSLKGEVERLLMEIIQSRRDCVEI----G-----RSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHE  330 (516)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhc----c-----cCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHH
Confidence            6667778888888888887654310    0     00123469999999764321 123358899999999999999999


Q ss_pred             chhhHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCccccccCCCchhHHHHHhhhccCCCCCcCcccccccCcccccCee
Q 009312          337 TTTTMVEWTMAELMQHPLVTKKVHEELAEVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPAQPLLVPHRASESSSIGGYT  416 (538)
Q Consensus       337 tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~  416 (538)
                      ||+.+++|++++|++||++|+|+|+||+++++.+ .++++++++||||+|||+||||++|++|. ++|.+.+|++++||.
T Consensus       331 Tta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~d~~i~g~~  408 (516)
T PLN02290        331 TTALLLTWTLMLLASNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATL-LPRMAFEDIKLGDLH  408 (516)
T ss_pred             HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccc-cceeecCCeeECCEE
Confidence            9999999999999999999999999999999864 78899999999999999999999999996 799999999999999


Q ss_pred             cCCCCEEEeehhhhhcCCCCC-CCCCCCCCCcccCCCCCCccccCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHh
Q 009312          417 IPKDTTLMLNVWAIHRDPRLW-DNPLEFRPERFLNDGIASKFDYSGKNFQYLPFGSGRRKCAGIALAERLLMFVLASFLH  495 (538)
Q Consensus       417 ip~G~~v~~~~~~~~~dp~~~-~dp~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~  495 (538)
                      ||||+.|.++.+.+||||++| +||++||||||++..       ......|+|||.|+|.|+|++||++|+++++++|++
T Consensus       409 IP~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~-------~~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~  481 (516)
T PLN02290        409 IPKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGRP-------FAPGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLIS  481 (516)
T ss_pred             ECCCCEEEecHHHhcCChhhhCCChhhcCccccCCCC-------CCCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999 899999999999521       012346999999999999999999999999999999


Q ss_pred             hceeecCCCCCCccCcCcCceeccCCCeeeeeccCCC
Q 009312          496 SFEWKLPVGTKLDLSEKYGFVTKKKEPLVAIPTPRLP  532 (538)
Q Consensus       496 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  532 (538)
                      +|++++.++.+.  .....++..|++++++++++|+|
T Consensus       482 ~f~~~~~~~~~~--~~~~~~~~~p~~~~~~~~~~~~~  516 (516)
T PLN02290        482 KFSFTISDNYRH--APVVVLTIKPKYGVQVCLKPLNP  516 (516)
T ss_pred             hceEeeCCCccc--CccceeeecCCCCCeEEEEeCCC
Confidence            999998766321  12235788899999999999986


No 18 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=6.8e-73  Score=564.97  Aligned_cols=447  Identities=20%  Similarity=0.291  Sum_probs=337.1

Q ss_pred             ccCCCCCCCCCCCCCCcccccccCCC----CCChhHHHHHHHHhhCCeEEEeccCeeEEEecCHHHHHHHHHhCCccccC
Q 009312           34 KSSKANAKLPPGQRGLPVVGYLPFLG----TTDLHKTFNDLSGVYGPIFKLWFGNKLCVVVSSPSLVKQVVHDQDLTFSN  109 (538)
Q Consensus        34 ~~~~~~~~~~pgp~~~p~lG~~~~~~----~~~~~~~~~~~~~kyG~v~~v~~~~~~~v~v~dp~~~~~i~~~~~~~~~~  109 (538)
                      +...++.+.||||+++|++||++.+.    .+.++.++.+++++||++|++++|++++|+|+||+++++|+.+++..|..
T Consensus        31 ~~~~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~  110 (490)
T PLN02500         31 RPKQKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFEC  110 (490)
T ss_pred             ccccCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEe
Confidence            34455667899999999999976432    23567788999999999999999999999999999999999987766643


Q ss_pred             CCcccccchhccCCCceecCCCChhhHHHHhhhhhhcCchhhHHH-hHHHHHHHHHHHHHHHHhhccccCCCCCCCccch
Q 009312          110 RSPSIAGLVTTYGGNDIALSNYGSQWRKLRKLFVGKLMSNTSLDA-CYALRKQEVKNTIRDLYNSDRDNIGNGSGNPIDI  188 (538)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~vdl  188 (538)
                      +.........  ++.+++ ..+|+.|+++|+.+ .+.|++..++. +.+.+.+.+..+++.+.          .+..+|+
T Consensus       111 ~~~~~~~~~~--g~~~~~-~~~g~~wr~~Rk~~-~~~f~~~~l~~~~~~~~~~~~~~~~~~~~----------~~~~vd~  176 (490)
T PLN02500        111 SYPRSIGGIL--GKWSML-VLVGDMHRDMRSIS-LNFLSHARLRTHLLKEVERHTLLVLDSWK----------ENSTFSA  176 (490)
T ss_pred             eCchHHHHHh--Cccccc-ccCCHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHHhC----------CCCCEEe
Confidence            3222111111  222444 44699999999998 58889888876 45666666666666553          3446999


Q ss_pred             HHhHHHHHHHHHHHhhhccchhhhccccchhHHHHHHHHHHHHHhhCCcccccccccccccchhhHHHHHHHHHHHHHHH
Q 009312          189 GELSNSTLVCVMKNMLWGEALELREKGITNLGAELKFKFAEFMVLLGTPNISDIFPVLSWLDIQGIERRAQKISLWLEDV  268 (538)
Q Consensus       189 ~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~l~~~  268 (538)
                      .+.++.+++|++++++||.+.+..+      ...+...+.........  ....+|...       .++..+..+.+.++
T Consensus       177 ~~~~~~~~~~vi~~~~fg~~~~~~~------~~~~~~~~~~~~~~~~~--~~~~~p~~~-------~~~~~~~~~~~~~~  241 (490)
T PLN02500        177 QDEAKKFTFNLMAKHIMSMDPGEEE------TEQLKKEYVTFMKGVVS--APLNFPGTA-------YRKALKSRATILKF  241 (490)
T ss_pred             hHHHHHHHHHHHHHHHhCCCCCchH------HHHHHHHHHHHHhhhhc--chhcCCCcc-------cHHHHHHHHHHHHH
Confidence            9999999999999999998754221      12222222222221110  001122211       23445567778888


Q ss_pred             HHHHHHHHHhhhhhhhhhhhhcCCCCCCCchhHHHHHHhhccCccccCCCCHHHHHHHHHHHHHhcccchhhHHHHHHHH
Q 009312          269 INSTVEQYRNKDFVIEGEERAGNNIEGSRNKDFLQLLLELQDNEDSANSISMNQFKALLVDIITGGTDTTTTMVEWTMAE  348 (538)
Q Consensus       269 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~  348 (538)
                      +.+.++++++....    .     .......|+++.+++.       ..++++++++++.++++||+|||+.+++|++++
T Consensus       242 ~~~~i~~~~~~~~~----~-----~~~~~~~d~l~~ll~~-------~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~  305 (490)
T PLN02500        242 IERKMEERIEKLKE----E-----DESVEEDDLLGWVLKH-------SNLSTEQILDLILSLLFAGHETSSVAIALAIFF  305 (490)
T ss_pred             HHHHHHHHHHhhhc----c-----cCCCCcchHHHHHHhc-------cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            88888877654310    0     0012346899999863       248899999999999999999999999999999


Q ss_pred             HhcCchHHHHHHHHHHHHhcC-----CCccccccCCCchhHHHHHhhhccCCCCCcCcccccccCcccccCeecCCCCEE
Q 009312          349 LMQHPLVTKKVHEELAEVVGM-----DSCVEEFHLPKLKYLDAVVKETFRLHPAQPLLVPHRASESSSIGGYTIPKDTTL  423 (538)
Q Consensus       349 L~~~p~~~~~lr~Ei~~~~~~-----~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v  423 (538)
                      |++||++|+|+|+|++++++.     ++.++.+++++|||++|||+||||++|++|. ++|.+.+|++++||.||||+.|
T Consensus       306 L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~-~~R~~~~d~~~~G~~IPkGt~V  384 (490)
T PLN02500        306 LQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRF-LHRKALKDVRYKGYDIPSGWKV  384 (490)
T ss_pred             HhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccC-eeeEeCCCceeCCEEECCCCEE
Confidence            999999999999999998742     3457889999999999999999999999998 5899999999999999999999


Q ss_pred             EeehhhhhcCCCCCCCCCCCCCCcccCCCCCCccc--cCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHhhceeec
Q 009312          424 MLNVWAIHRDPRLWDNPLEFRPERFLNDGIASKFD--YSGKNFQYLPFGSGRRKCAGIALAERLLMFVLASFLHSFEWKL  501 (538)
Q Consensus       424 ~~~~~~~~~dp~~~~dp~~F~P~R~l~~~~~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~  501 (538)
                      +++++++||||++|+||++||||||++++.+....  ....+..|+|||+|+|.|+|++||++|+++++++|+++|+|++
T Consensus       385 ~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~  464 (490)
T PLN02500        385 LPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWEL  464 (490)
T ss_pred             EechhhcccCcccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEE
Confidence            99999999999999999999999999743211100  0124567999999999999999999999999999999999998


Q ss_pred             CCCCCCccCcCcCceeccCCCeeeeeccC
Q 009312          502 PVGTKLDLSEKYGFVTKKKEPLVAIPTPR  530 (538)
Q Consensus       502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  530 (538)
                      .++.+..   ....+ .+.+++++++++.
T Consensus       465 ~~~~~~~---~~~~~-~~~~~l~~~~~~~  489 (490)
T PLN02500        465 AEADQAF---AFPFV-DFPKGLPIRVRRI  489 (490)
T ss_pred             cCCCcce---ecccc-cCCCCceEEEEeC
Confidence            7664321   12223 3346898988763


No 19 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=3.1e-73  Score=570.55  Aligned_cols=455  Identities=32%  Similarity=0.552  Sum_probs=366.9

Q ss_pred             CCCCCCCcccccccCCC-CCChhHHHHHHHHhhCCeEEEeccCeeEEEecCHHHHHHHHHhCCccccCCCcccccch--h
Q 009312           43 PPGQRGLPVVGYLPFLG-TTDLHKTFNDLSGVYGPIFKLWFGNKLCVVVSSPSLVKQVVHDQDLTFSNRSPSIAGLV--T  119 (538)
Q Consensus        43 ~pgp~~~p~lG~~~~~~-~~~~~~~~~~~~~kyG~v~~v~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~--~  119 (538)
                      ||||+++|++||++.+. .++++.++.+++++||+||+++++++++++|+||+++++|+.++...+..+........  .
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            89999999999999885 36789999999999999999999999999999999999999998766654422222211  1


Q ss_pred             ccCCCceecCCCChhhHHHHhhhhhhcCchh-hHHHhHHHHHHHHHHHHHHHHhhccccCCCCCCCccchHHhHHHHHHH
Q 009312          120 TYGGNDIALSNYGSQWRKLRKLFVGKLMSNT-SLDACYALRKQEVKNTIRDLYNSDRDNIGNGSGNPIDIGELSNSTLVC  198 (538)
Q Consensus       120 ~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~-~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~vdl~~~~~~~~~~  198 (538)
                      ...+.++++ .+|+.|+.+|+.+. +.|+.. .+ .+.+.+.+.++.+++.+.....      .+..+|+.++++.+++|
T Consensus        81 ~~~~~~l~~-~~~~~~~~~R~~~~-~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~------~~~~vd~~~~~~~~~~d  151 (463)
T PF00067_consen   81 PFGGKGLFF-SDGERWRRQRRLLA-PAFSSKKIL-KLEPLIDEEAEELIDQLRKKAG------SSGPVDLFDWLRRFALD  151 (463)
T ss_dssp             HHTTTSSTT-SSHHHHHHHHHHHH-HHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTT------SESEEEHHHHHHHHHHH
T ss_pred             ccccccccc-cccccccccccccc-ccccccccc-cccccccccccccccccccccc------ccceeeeeccccccccc
Confidence            233455544 45899999999984 666666 56 8999999999999999988755      44479999999999999


Q ss_pred             HHHHhhhccchhhhccccchhHHHHHHHHHHHHHhhCCc--ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 009312          199 VMKNMLWGEALELREKGITNLGAELKFKFAEFMVLLGTP--NISDIFPVLSWLDIQGIERRAQKISLWLEDVINSTVEQY  276 (538)
Q Consensus       199 ~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~l~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~  276 (538)
                      +++.++||.+++..+.   +....+.+.+......+...  .....+|++.++ .....+...++.+.+.+++...++++
T Consensus       152 ~i~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~  227 (463)
T PF00067_consen  152 VIGRVLFGKDFGSLDD---EDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYL-PTPLFRRFKRARDRLRKYIKEIIEER  227 (463)
T ss_dssp             HHHHHHHSSHHHGTTH---HHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTS-SHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccceeeeccc---cccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccc
Confidence            9999999999885554   32344555555555443221  244567777766 34456777888889999999999998


Q ss_pred             HhhhhhhhhhhhhcCCCCCCCchhHHHHHHhhc-cCccccCCCCHHHHHHHHHHHHHhcccchhhHHHHHHHHHhcCchH
Q 009312          277 RNKDFVIEGEERAGNNIEGSRNKDFLQLLLELQ-DNEDSANSISMNQFKALLVDIITGGTDTTTTMVEWTMAELMQHPLV  355 (538)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~-~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~  355 (538)
                      ++..      +     .......|+++.++... +.. .+..++++++..++..+++||+|||+.+++|++++|++||++
T Consensus       228 ~~~~------~-----~~~~~~~d~l~~ll~~~~~~~-~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~  295 (463)
T PF00067_consen  228 REEL------D-----DGDESRRDLLDSLLQASSDSD-GPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEV  295 (463)
T ss_dssp             HHSH------H-----SSSSSCSSHHHHHHHHHHTTT-TTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHH
T ss_pred             cccc------c-----ccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccc
Confidence            8766      2     11235789999999876 221 114799999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCccccccCCCchhHHHHHhhhccCCCCCcCcccccccCcccccCeecCCCCEEEeehhhhhcCCC
Q 009312          356 TKKVHEELAEVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPAQPLLVPHRASESSSIGGYTIPKDTTLMLNVWAIHRDPR  435 (538)
Q Consensus       356 ~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~dp~  435 (538)
                      |+|+|+||+++.+.++.++.+++++||||+|||+||||++|+++..++|.+.+|++++||.||||+.|+++++.+|+||+
T Consensus       296 ~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~  375 (463)
T PF00067_consen  296 QEKLREEIDSVLGDGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPE  375 (463)
T ss_dssp             HHHHHHHHHHHTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999999977778899999999999999999999999999668899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcccCCCCCCccccCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHhhceeecCCCCCCccCcC-cC
Q 009312          436 LWDNPLEFRPERFLNDGIASKFDYSGKNFQYLPFGSGRRKCAGIALAERLLMFVLASFLHSFEWKLPVGTKLDLSEK-YG  514 (538)
Q Consensus       436 ~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~-~~  514 (538)
                      +|+||++|+||||++.+.    ........|+|||.|+|.|||++||++|++++|+++|++|||++.++.+...... .+
T Consensus       376 ~~~dp~~F~P~R~~~~~~----~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~  451 (463)
T PF00067_consen  376 YFPDPDEFDPERFLDERG----ISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNG  451 (463)
T ss_dssp             TSSSTTS--TTGGBTTTS----TBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCS
T ss_pred             cccccccccccccccccc----ccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCc
Confidence            999999999999998432    1123567899999999999999999999999999999999999976644332222 24


Q ss_pred             ceeccCCCeeeee
Q 009312          515 FVTKKKEPLVAIP  527 (538)
Q Consensus       515 ~~~~~~~~~~~~~  527 (538)
                      ++. ++.+++|+|
T Consensus       452 ~~~-~~~~~~~~~  463 (463)
T PF00067_consen  452 FLL-PPKPLKVKF  463 (463)
T ss_dssp             SSE-EESSSEEEE
T ss_pred             eEe-eCCCcEEeC
Confidence            444 444576654


No 20 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=6.8e-72  Score=553.18  Aligned_cols=434  Identities=20%  Similarity=0.280  Sum_probs=338.0

Q ss_pred             cCCCCCCCCCCCCCCcccccccCCCCCChhHHHHHHHHhhCCeEEEeccCeeEEEecCHHHHHHHHHhCCccccCCCccc
Q 009312           35 SSKANAKLPPGQRGLPVVGYLPFLGTTDLHKTFNDLSGVYGPIFKLWFGNKLCVVVSSPSLVKQVVHDQDLTFSNRSPSI  114 (538)
Q Consensus        35 ~~~~~~~~~pgp~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~v~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~  114 (538)
                      ..+...+.||||+++|++||++.+ .+++..++.+++++||++|++++|++++++|+||+++++|+.++...|..+....
T Consensus        25 ~~~~r~~~ppgp~~~P~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~  103 (463)
T PLN02774         25 VRYSKKGLPPGTMGWPLFGETTEF-LKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQS  103 (463)
T ss_pred             hccCCCCCCCCCCCCCchhhHHHH-HHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHH
Confidence            334455778999999999998876 4566788999999999999999999999999999999999988766654332211


Q ss_pred             ccchhccCCCceecCCCChhhHHHHhhhhhhcCchhhHHH-hHHHHHHHHHHHHHHHHhhccccCCCCCCCccchHHhHH
Q 009312          115 AGLVTTYGGNDIALSNYGSQWRKLRKLFVGKLMSNTSLDA-CYALRKQEVKNTIRDLYNSDRDNIGNGSGNPIDIGELSN  193 (538)
Q Consensus       115 ~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~vdl~~~~~  193 (538)
                      ...   ..|.+.+++.+|+.|+++|+.+ .+.|++..++. +.+.+.+.+.++++++.          .++++|+.+.+.
T Consensus       104 ~~~---~lg~~~~~~~~g~~w~~~R~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~v~~~~~~~  169 (463)
T PLN02774        104 MLD---ILGTCNIAAVHGSTHRYMRGSL-LSLISPTMIRDHLLPKIDEFMRSHLSGWD----------GLKTIDIQEKTK  169 (463)
T ss_pred             HHH---HhCccchhhcCCHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHhhC----------CCCCEEeeHHHH
Confidence            111   1233334455799999999998 58899988876 67888877777776653          335699999999


Q ss_pred             HHHHHHHHHhhhccchhhhccccchhHHHHHHHHHHHHHhhCCcccccccccccccchhhHHHHHHHHHHHHHHHHHHHH
Q 009312          194 STLVCVMKNMLWGEALELREKGITNLGAELKFKFAEFMVLLGTPNISDIFPVLSWLDIQGIERRAQKISLWLEDVINSTV  273 (538)
Q Consensus       194 ~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~l~~~~~~~i  273 (538)
                      .++++++..++||.+.....       ..+...+.....  ...    .+|.  ++|.. ..++..++.+.+.+++.+.+
T Consensus       170 ~~~~~~~~~~~~g~~~~~~~-------~~~~~~~~~~~~--~~~----~~~~--~lp~~-~~~~~~~~~~~~~~~~~~~i  233 (463)
T PLN02774        170 EMALLSALKQIAGTLSKPIS-------EEFKTEFFKLVL--GTL----SLPI--DLPGT-NYRSGVQARKNIVRMLRQLI  233 (463)
T ss_pred             HHHHHHHHHHHcCCCChHHH-------HHHHHHHHHHhc--ccc----cCCc--CCCCh-hhhHHHHHHHHHHHHHHHHH
Confidence            99999999999997643211       122222222110  110    1121  22211 12455667788888888888


Q ss_pred             HHHHhhhhhhhhhhhhcCCCCCCCchhHHHHHHhhccCccccCCCCHHHHHHHHHHHHHhcccchhhHHHHHHHHHhcCc
Q 009312          274 EQYRNKDFVIEGEERAGNNIEGSRNKDFLQLLLELQDNEDSANSISMNQFKALLVDIITGGTDTTTTMVEWTMAELMQHP  353 (538)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p  353 (538)
                      +++++..               ....|+++.++....+   +..++++++.+++.++++||+|||+++++|++++|++||
T Consensus       234 ~~r~~~~---------------~~~~d~l~~ll~~~~~---~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P  295 (463)
T PLN02774        234 QERRASG---------------ETHTDMLGYLMRKEGN---RYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHP  295 (463)
T ss_pred             HHHHhcC---------------CCcccHHHHHHhCccC---CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCH
Confidence            7765421               2246999999974322   335899999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcC---CCccccccCCCchhHHHHHhhhccCCCCCcCcccccccCcccccCeecCCCCEEEeehhhh
Q 009312          354 LVTKKVHEELAEVVGM---DSCVEEFHLPKLKYLDAVVKETFRLHPAQPLLVPHRASESSSIGGYTIPKDTTLMLNVWAI  430 (538)
Q Consensus       354 ~~~~~lr~Ei~~~~~~---~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~  430 (538)
                      ++|+|+++|++++.+.   ++.++++++++||||+|||+|+||++|+++. ++|.+.+|++++||.||||+.|+++++.+
T Consensus       296 ~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~-~~R~~~~d~~l~g~~IpkGt~v~~~~~~~  374 (463)
T PLN02774        296 KALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNG-VLRKTTQDMELNGYVIPKGWRIYVYTREI  374 (463)
T ss_pred             HHHHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCC-cccccCCCeeECCEEECCCCEEEEehHHh
Confidence            9999999999999863   3457889999999999999999999999986 57999999999999999999999999999


Q ss_pred             hcCCCCCCCCCCCCCCcccCCCCCCccccCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHhhceeecCCCCCCccC
Q 009312          431 HRDPRLWDNPLEFRPERFLNDGIASKFDYSGKNFQYLPFGSGRRKCAGIALAERLLMFVLASFLHSFEWKLPVGTKLDLS  510 (538)
Q Consensus       431 ~~dp~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~  510 (538)
                      ||||++|+||++|+||||++.+.      . ....|+|||+|+|.|||++||++|++++++.|+++|++++.++.++-  
T Consensus       375 ~rdp~~~~dP~~F~PeRfl~~~~------~-~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~~--  445 (463)
T PLN02774        375 NYDPFLYPDPMTFNPWRWLDKSL------E-SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKLM--  445 (463)
T ss_pred             cCCcccCCChhccCchhcCCCCc------C-CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCccc--
Confidence            99999999999999999996321      1 12359999999999999999999999999999999999987765432  


Q ss_pred             cCcCceeccCCCeeeeecc
Q 009312          511 EKYGFVTKKKEPLVAIPTP  529 (538)
Q Consensus       511 ~~~~~~~~~~~~~~~~~~~  529 (538)
                       .. .+..|++++++++++
T Consensus       446 -~~-~~~~p~~g~~~~~~~  462 (463)
T PLN02774        446 -KF-PRVEAPNGLHIRVSP  462 (463)
T ss_pred             -cC-CCCCCCCCceEEeee
Confidence             11 234577889998873


No 21 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=8.1e-71  Score=554.92  Aligned_cols=454  Identities=23%  Similarity=0.386  Sum_probs=340.7

Q ss_pred             ccccCCCCCChhHHHHHHHHhhCCeEEEeccCeeEEEecCHHHHHHHHHhCCccccCCCcccccchhccCCCceecCCCC
Q 009312           53 GYLPFLGTTDLHKTFNDLSGVYGPIFKLWFGNKLCVVVSSPSLVKQVVHDQDLTFSNRSPSIAGLVTTYGGNDIALSNYG  132 (538)
Q Consensus        53 G~~~~~~~~~~~~~~~~~~~kyG~v~~v~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  132 (538)
                      ||+..+.++.++..+.+++++||+||++++|+.++++|+||+.+++||.++...|..+.......  ...+.+++ +.+|
T Consensus       143 G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~--~~~g~~l~-~~dg  219 (633)
T PLN02738        143 GSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILE--FVMGKGLI-PADG  219 (633)
T ss_pred             CcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHh--hccCCcee-cCCc
Confidence            44445545667889999999999999999999999999999999999997765565443211111  11244554 5679


Q ss_pred             hhhHHHHhhhhhhcCchhhHHHhHHHHHHHHHHHHHHHHhhccccCCCCCCCccchHHhHHHHHHHHHHHhhhccchhhh
Q 009312          133 SQWRKLRKLFVGKLMSNTSLDACYALRKQEVKNTIRDLYNSDRDNIGNGSGNPIDIGELSNSTLVCVMKNMLWGEALELR  212 (538)
Q Consensus       133 ~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~  212 (538)
                      +.|+++|+.+ .++|+...++.+++.+.+.++.+++.+.+...      ++..+|+...++.+++|+|+.++||.+++..
T Consensus       220 e~wr~rRr~l-~p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~------~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~  292 (633)
T PLN02738        220 EIWRVRRRAI-VPALHQKYVAAMISLFGQASDRLCQKLDAAAS------DGEDVEMESLFSRLTLDIIGKAVFNYDFDSL  292 (633)
T ss_pred             HHHHHHHHhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc------CCCcEeHHHHHHHHHHHHHHHHHhCCCcccc
Confidence            9999999998 69999999999999999999999999986543      6778999999999999999999999998754


Q ss_pred             ccccchhHHHHHHHHHHHHHhhCCcccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhcCC
Q 009312          213 EKGITNLGAELKFKFAEFMVLLGTPNISDIFPVLSWLDIQGIERRAQKISLWLEDVINSTVEQYRNKDFVIEGEERAGNN  292 (538)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~  292 (538)
                      ..+. .....+...+...............+|.+..++  ...++..+..+.+.++....++.+++.....+. ... ..
T Consensus       293 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~--~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~-~~~-~~  367 (633)
T PLN02738        293 SNDT-GIVEAVYTVLREAEDRSVSPIPVWEIPIWKDIS--PRQRKVAEALKLINDTLDDLIAICKRMVEEEEL-QFH-EE  367 (633)
T ss_pred             ccch-HHHHHHHHHHHHHHHHhhcchhhhhhhHHhhhc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cch-hc
Confidence            3311 122222223322211111110001122222221  112334445555556666655544332210000 000 00


Q ss_pred             CCCCCchhHHHHHHhhccCccccCCCCHHHHHHHHHHHHHhcccchhhHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCc
Q 009312          293 IEGSRNKDFLQLLLELQDNEDSANSISMNQFKALLVDIITGGTDTTTTMVEWTMAELMQHPLVTKKVHEELAEVVGMDSC  372 (538)
Q Consensus       293 ~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~  372 (538)
                      .......|+++.|++..      ..++++++.+++..+++||+|||+.+++|++++|++||++|+|||+||+++++ ++.
T Consensus       368 ~~~~~~~dil~~Ll~~~------~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~-~~~  440 (633)
T PLN02738        368 YMNERDPSILHFLLASG------DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLG-DRF  440 (633)
T ss_pred             ccccccchHHHHHHHcC------CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC-CCC
Confidence            00123468999998752      35889999999999999999999999999999999999999999999999988 466


Q ss_pred             cccccCCCchhHHHHHhhhccCCCCCcCcccccccCcccccCeecCCCCEEEeehhhhhcCCCCCCCCCCCCCCcccCCC
Q 009312          373 VEEFHLPKLKYLDAVVKETFRLHPAQPLLVPHRASESSSIGGYTIPKDTTLMLNVWAIHRDPRLWDNPLEFRPERFLNDG  452 (538)
Q Consensus       373 ~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~dp~~~~dp~~F~P~R~l~~~  452 (538)
                      ++++++++||||+|||+|+||++|++|. .+|++.+|.+++||.||+||.|.++.+.+||||++|+||++|+||||+.++
T Consensus       441 ~t~edL~kLPYL~AVIkEtLRL~p~~p~-~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~  519 (633)
T PLN02738        441 PTIEDMKKLKYTTRVINESLRLYPQPPV-LIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDG  519 (633)
T ss_pred             CCHHHHccCHHHHHHHHHHHhcCCCccc-cceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCC
Confidence            7899999999999999999999999998 568899999999999999999999999999999999999999999998532


Q ss_pred             CCCccccCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHhhceeecCCCCCCccCcCcCceeccCCCeeeeeccCCC
Q 009312          453 IASKFDYSGKNFQYLPFGSGRRKCAGIALAERLLMFVLASFLHSFEWKLPVGTKLDLSEKYGFVTKKKEPLVAIPTPRLP  532 (538)
Q Consensus       453 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  532 (538)
                      ...  ........|+|||.|+|.|+|++||++|++++|++|+++|+|++.++.+ +.....+++..+.+++++++++|++
T Consensus       520 ~~~--~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~-~~~~~~~~~~~p~~~l~v~l~~R~~  596 (633)
T PLN02738        520 PNP--NETNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP-PVKMTTGATIHTTEGLKMTVTRRTK  596 (633)
T ss_pred             CCc--cccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC-CcccccceEEeeCCCcEEEEEECCC
Confidence            111  1122456799999999999999999999999999999999999876643 2223345677888899999999975


No 22 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=5.4e-71  Score=549.12  Aligned_cols=454  Identities=18%  Similarity=0.291  Sum_probs=338.0

Q ss_pred             CCCCCCCCCcccccccCCCCC--ChhHHHHHHHHhhCCeEE---EeccCeeEEEecCHHHHHHHHHhCCccccCCCcccc
Q 009312           41 KLPPGQRGLPVVGYLPFLGTT--DLHKTFNDLSGVYGPIFK---LWFGNKLCVVVSSPSLVKQVVHDQDLTFSNRSPSIA  115 (538)
Q Consensus        41 ~~~pgp~~~p~lG~~~~~~~~--~~~~~~~~~~~kyG~v~~---v~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~  115 (538)
                      +..|||+++|++||++.+...  ...+++.+...+||..++   .++|+.++++|+||+++++|+.++...|.++.... 
T Consensus        31 ~~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~-  109 (500)
T PLN02169         31 HGQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFK-  109 (500)
T ss_pred             CCCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHH-
Confidence            357889999999998765322  233444455555886555   67899999999999999999998766665543221 


Q ss_pred             cchhccCCCceecCCCChhhHHHHhhhhhhcCchhhHHHh--HHHHHHHHHHHHHHHHhhccccCCCCCCCccchHHhHH
Q 009312          116 GLVTTYGGNDIALSNYGSQWRKLRKLFVGKLMSNTSLDAC--YALRKQEVKNTIRDLYNSDRDNIGNGSGNPIDIGELSN  193 (538)
Q Consensus       116 ~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~--~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~vdl~~~~~  193 (538)
                       ......|.|++++ +|+.|+++||.+ .+.|+...+..+  .+.+.+.++.+++.+.+...      ++..+|+.+.+.
T Consensus       110 -~~~~~~g~gl~~~-~g~~Wr~~Rk~l-~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~~~vd~~~~~~  180 (500)
T PLN02169        110 -KIFDVLGEGILTV-DFELWEDLRKSN-HALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAH------ENIIIDLQDVFM  180 (500)
T ss_pred             -HHHHhhcCccccc-CcHHHHHHHHHH-HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh------cCCeEeHHHHHH
Confidence             1122235666655 599999999998 699988877642  35666777888888765433      566899999999


Q ss_pred             HHHHHHHHHhhhccchhhhccccchhHHHHHHHHHHHHHhhCCcccccccccc-----cccchhhHHHHHHHHHHHHHHH
Q 009312          194 STLVCVMKNMLWGEALELREKGITNLGAELKFKFAEFMVLLGTPNISDIFPVL-----SWLDIQGIERRAQKISLWLEDV  268 (538)
Q Consensus       194 ~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l-----~~l~~~~~~~~~~~~~~~l~~~  268 (538)
                      .+++|+|+.++||.+.+..+..  .....+...+........   .....|++     .++ ..+..++..++.+.+.++
T Consensus       181 ~~t~dvi~~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  254 (500)
T PLN02169        181 RFMFDTSSILMTGYDPMSLSIE--MLEVEFGEAADIGEEAIY---YRHFKPVILWRLQNWI-GIGLERKMRTALATVNRM  254 (500)
T ss_pred             HHHHHHHHhheeCCCccccCCC--CCCCHHHHHHHHHHHHHH---hHHhccHHHHHHHHHh-CCchhhHHHHHHHHHHHH
Confidence            9999999999999987543321  001223333332221111   11122321     122 123456677888899999


Q ss_pred             HHHHHHHHHhhhhhhhhhhhhcCCCCCCCchhHHHHHHhhccCc-cccCCCCHHHHHHHHHHHHHhcccchhhHHHHHHH
Q 009312          269 INSTVEQYRNKDFVIEGEERAGNNIEGSRNKDFLQLLLELQDNE-DSANSISMNQFKALLVDIITGGTDTTTTMVEWTMA  347 (538)
Q Consensus       269 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~-~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~  347 (538)
                      +.+.++++++...     ++ .  .......|+++.+++..++. ..+..++++++.+++.++++||+|||+++++|++|
T Consensus       255 ~~~~I~~r~~~~~-----~~-~--~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~  326 (500)
T PLN02169        255 FAKIISSRRKEEI-----SR-A--ETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFW  326 (500)
T ss_pred             HHHHHHHHHHHhh-----cc-c--cccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHH
Confidence            9999988765421     00 0  00112468999999764321 11234788999999999999999999999999999


Q ss_pred             HHhcCchHHHHHHHHHHHHhcCCCccccccCCCchhHHHHHhhhccCCCCCcCcccccccCccc-ccCeecCCCCEEEee
Q 009312          348 ELMQHPLVTKKVHEELAEVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPAQPLLVPHRASESSS-IGGYTIPKDTTLMLN  426 (538)
Q Consensus       348 ~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~-l~g~~ip~G~~v~~~  426 (538)
                      +|++||++|+|+++||++++      +.+++.+||||+|||+||||++|++|.. .|.+.+|.+ ++||.||||+.|.++
T Consensus       327 ~La~~Pevq~kl~~Ei~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~-~r~~~~d~~~~~G~~IpkGt~v~i~  399 (500)
T PLN02169        327 LLSKHPQVMAKIRHEINTKF------DNEDLEKLVYLHAALSESMRLYPPLPFN-HKAPAKPDVLPSGHKVDAESKIVIC  399 (500)
T ss_pred             HHHCCHHHHHHHHHHHHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcC-ceecCCCCCccCCEEECCCCEEEEc
Confidence            99999999999999999874      4688999999999999999999999985 566665655 599999999999999


Q ss_pred             hhhhhcCCCCC-CCCCCCCCCcccCCCCCCccccCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHhhceeecCCCC
Q 009312          427 VWAIHRDPRLW-DNPLEFRPERFLNDGIASKFDYSGKNFQYLPFGSGRRKCAGIALAERLLMFVLASFLHSFEWKLPVGT  505 (538)
Q Consensus       427 ~~~~~~dp~~~-~dp~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~  505 (538)
                      ++.+||||++| +||++||||||++++.+..   ...++.|+|||+|+|.|+|++||++|+|+++++|+++|++++.++.
T Consensus       400 ~~~ihrd~~~w~~dP~~F~PeRfl~~~~~~~---~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~  476 (500)
T PLN02169        400 IYALGRMRSVWGEDALDFKPERWISDNGGLR---HEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGH  476 (500)
T ss_pred             HHHhhCCccccCCChhhcCccccCCCCCCcc---CCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCC
Confidence            99999999999 8999999999996322110   1236789999999999999999999999999999999999987654


Q ss_pred             CCccCcCcCceeccCCCeeeeeccC
Q 009312          506 KLDLSEKYGFVTKKKEPLVAIPTPR  530 (538)
Q Consensus       506 ~~~~~~~~~~~~~~~~~~~~~~~~r  530 (538)
                      ++  ....++++.+++++++++++|
T Consensus       477 ~~--~~~~~~~l~~~~gl~l~l~~~  499 (500)
T PLN02169        477 KI--EAIPSILLRMKHGLKVTVTKK  499 (500)
T ss_pred             Cc--ccccceEEecCCCEEEEEEeC
Confidence            44  234567888999999999987


No 23 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.9e-71  Score=498.04  Aligned_cols=449  Identities=23%  Similarity=0.356  Sum_probs=359.8

Q ss_pred             CCCCCCCC-CcccccccCCCCCChhHHHHHHHHhhCCeEEEeccCeeEEEecCHHHHHHHHHhCCccccCCCcccccchh
Q 009312           41 KLPPGQRG-LPVVGYLPFLGTTDLHKTFNDLSGVYGPIFKLWFGNKLCVVVSSPSLVKQVVHDQDLTFSNRSPSIAGLVT  119 (538)
Q Consensus        41 ~~~pgp~~-~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~v~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~  119 (538)
                      ..||.-++ +|++|+...+ ++++.+++++.++|||+||++.++|+.+.++.||+....++.++...+...... .....
T Consensus        31 ~~PPli~gwiP~lG~a~~f-gk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~-~~l~~  108 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAF-GKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAY-SKLTT  108 (486)
T ss_pred             CCCcccccCcchhhHHHHh-ccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHH-HHhhh
Confidence            56776654 7999999999 789999999999999999999999999999999999999998873333222111 11122


Q ss_pred             ccCCCceecCCCChhhHHHHhhhhhhcCchhhHHHhHHHHHHHHHHHHHH-HHhhccccCCCCCCCccchHHhHHHHHHH
Q 009312          120 TYGGNDIALSNYGSQWRKLRKLFVGKLMSNTSLDACYALRKQEVKNTIRD-LYNSDRDNIGNGSGNPIDIGELSNSTLVC  198 (538)
Q Consensus       120 ~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~-l~~~~~~~~~~~~~~~vdl~~~~~~~~~~  198 (538)
                      ...|+|++....+....++.+.+ ...+....++.+.+.|.+++.+.+.. +.+         +|.+..+.++...+++.
T Consensus       109 ~vFg~~v~~d~~~~~~~e~~~~~-k~~L~~~~lk~~~e~m~~el~~~f~~~~~~---------s~~~d~l~~~~~~ii~t  178 (486)
T KOG0684|consen  109 PVFGKGVVYDVPNHVMMEQKKFF-KSALGGVALKSLVELMLEELHAYFETSLGE---------SGETDGLYTFCRLIIFT  178 (486)
T ss_pred             hhcCCCccccCCCchHHHHHHHH-HHHhchhhHHHHHHHHHHHHHHHHhccccc---------ccchhHhhhhhHHHhhh
Confidence            23367787777778888888887 67888999999999999999988887 211         56667788888888888


Q ss_pred             HHHHhhhccchhhhccccchhHHHHHHHHHHHHHhhCCcccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009312          199 VMKNMLWGEALELREKGITNLGAELKFKFAEFMVLLGTPNISDIFPVLSWLDIQGIERRAQKISLWLEDVINSTVEQYRN  278 (538)
Q Consensus       199 ~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~~~  278 (538)
                      +.-..+||+.....+++    .......++..+.     .+...||.  ++|.+.. ++..++++++.+.....+.++++
T Consensus       179 As~~ll~~e~r~~~d~~----~a~l~~dLd~~F~-----~~d~~FP~--~LP~~~~-r~~~ra~~~i~k~f~~~i~~rr~  246 (486)
T KOG0684|consen  179 ASRLLLGGEVRDQLDAD----VAKLYHDLDQGFQ-----PFDFLFPY--NLPIPLL-RRRDRARKKISKIFSKIILDRRA  246 (486)
T ss_pred             hHHHhhhhhhhhhhcch----HHHHHHHHhcccc-----chHhhccc--CCCcchh-hhHHHHHHHHHHHHHHHHHHHHh
Confidence            88888888877665532    1222222222111     23335663  4444444 34448889999999999988887


Q ss_pred             hhhhhhhhhhhcCCCCCCCchhHHHHHHhhccCccccCCCCHHHHHHHHHHHHHhcccchhhHHHHHHHHHhcCchHHHH
Q 009312          279 KDFVIEGEERAGNNIEGSRNKDFLQLLLELQDNEDSANSISMNQFKALLVDIITGGTDTTTTMVEWTMAELMQHPLVTKK  358 (538)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~  358 (538)
                      ..              .....|+++.+++..+   ++.+.+++|++...+.++|||+.||+.|.+|++++|++|||++++
T Consensus       247 s~--------------s~~~~dmlq~l~~~y~---dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a  309 (486)
T KOG0684|consen  247 SI--------------SKWDNDMLQSLMEKYK---DGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKA  309 (486)
T ss_pred             cc--------------ccccHHHHHHHHHHhh---cCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHH
Confidence            65              3456799999998333   367899999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCc-cccccCCCchhHHHHHhhhccCCCCCcCcccccccCcccccC----eecCCCCEEEeehhhhhcC
Q 009312          359 VHEELAEVVGMDSC-VEEFHLPKLKYLDAVVKETFRLHPAQPLLVPHRASESSSIGG----YTIPKDTTLMLNVWAIHRD  433 (538)
Q Consensus       359 lr~Ei~~~~~~~~~-~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g----~~ip~G~~v~~~~~~~~~d  433 (538)
                      +++|+.+++|.... ++++++++||.|++||+|||||+||.+. +.|.+.+|+++.+    |.||+|++|.+++..+|+|
T Consensus       310 ~~eE~k~vlG~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~-~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~  388 (486)
T KOG0684|consen  310 VREEQKRVLGEKKEKLTYDQLKDLPLLDSCIKETLRLHPPAHS-LMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRD  388 (486)
T ss_pred             HHHHHHHHhhccCCCCCHHHHhcchHHHHHHHHHHhcCCchhh-HHHhhccceeeccCCcceecCCCCEEEeccccccCC
Confidence            99999999987655 8999999999999999999999998887 5699999999955    9999999999999999999


Q ss_pred             CCCCCCCCCCCCCcccCCCCCCccccCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHhhceeecCCCCCCccCcCc
Q 009312          434 PRLWDNPLEFRPERFLNDGIASKFDYSGKNFQYLPFGSGRRKCAGIALAERLLMFVLASFLHSFEWKLPVGTKLDLSEKY  513 (538)
Q Consensus       434 p~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~  513 (538)
                      |+||+||+.|+|+||++++.+.+.....-.+.++|||+|+|.|||++||.+|+|+++..+|++||+++.+|.-.+.++ .
T Consensus       389 peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~P~~d~-s  467 (486)
T KOG0684|consen  389 PEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPFPEVDY-S  467 (486)
T ss_pred             ccccCChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCCCCCCH-H
Confidence            999999999999999986554321122234567999999999999999999999999999999999999973223333 2


Q ss_pred             CceeccCCCeeeeeccCCC
Q 009312          514 GFVTKKKEPLVAIPTPRLP  532 (538)
Q Consensus       514 ~~~~~~~~~~~~~~~~r~~  532 (538)
                      .+++.|+.+++|+++.|+.
T Consensus       468 ~~v~~P~g~v~irYK~R~~  486 (486)
T KOG0684|consen  468 RMVMQPEGDVRIRYKRRPL  486 (486)
T ss_pred             HhhcCCCCCceEEEeecCC
Confidence            3488999999999999973


No 24 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=7.9e-71  Score=553.74  Aligned_cols=459  Identities=19%  Similarity=0.271  Sum_probs=338.7

Q ss_pred             CCCCCCCCcccccccCCCCCChhHHHHHHHHhh---CCeEEEeccCeeEEEecCHHHHHHHHHhCCccccCCCcccccch
Q 009312           42 LPPGQRGLPVVGYLPFLGTTDLHKTFNDLSGVY---GPIFKLWFGNKLCVVVSSPSLVKQVVHDQDLTFSNRSPSIAGLV  118 (538)
Q Consensus        42 ~~pgp~~~p~lG~~~~~~~~~~~~~~~~~~~ky---G~v~~v~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~  118 (538)
                      .+|||+++|++||++.+.. + ...+.++.++|   |++|++++|+.+.++|+||+++++|+.++...|........ ..
T Consensus        31 ~~pgp~~~p~~G~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~-~~  107 (516)
T PLN03195         31 NRKGPKSWPIIGAALEQLK-N-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHS-YM  107 (516)
T ss_pred             ccCCCCCCCeecchHHHHh-c-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHH-HH
Confidence            4789999999999876522 2 34466777777   89999999999999999999999999876444543321110 01


Q ss_pred             hccCCCceecCCCChhhHHHHhhhhhhcCchhhHHHhHHHH-HHHHHHHHHHHHhhccccCCCCCCCccchHHhHHHHHH
Q 009312          119 TTYGGNDIALSNYGSQWRKLRKLFVGKLMSNTSLDACYALR-KQEVKNTIRDLYNSDRDNIGNGSGNPIDIGELSNSTLV  197 (538)
Q Consensus       119 ~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~-~~~~~~l~~~l~~~~~~~~~~~~~~~vdl~~~~~~~~~  197 (538)
                      ....+.++ ++.+|+.|+++||.+ .+.|+...++.+.+.+ .+.++.+++.+.+...      ++..+|+.++++.+++
T Consensus       108 ~~~~g~~l-~~~~g~~w~~~Rr~l-~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~------~~~~vd~~~~~~~~~~  179 (516)
T PLN03195        108 EVLLGDGI-FNVDGELWRKQRKTA-SFEFASKNLRDFSTVVFREYSLKLSSILSQASF------ANQVVDMQDLFMRMTL  179 (516)
T ss_pred             HHHhcCee-eccCcHHHHHHHHhc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh------cCCeEcHHHHHHHHHH
Confidence            11124554 456799999999998 6889999999999876 5556666666654322      4567999999999999


Q ss_pred             HHHHHhhhccchhhhccccchhHHHHHHHHHHHHHhhCCccccccccccc-ccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 009312          198 CVMKNMLWGEALELREKGITNLGAELKFKFAEFMVLLGTPNISDIFPVLS-WLDIQGIERRAQKISLWLEDVINSTVEQY  276 (538)
Q Consensus       198 ~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~-~l~~~~~~~~~~~~~~~l~~~~~~~i~~~  276 (538)
                      |+|+.++||.+++..+.+...  ..+.+.+......... .....++.+. +++ ....+...+..+.+.+++.+.++++
T Consensus       180 dvi~~~~fG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~  255 (516)
T PLN03195        180 DSICKVGFGVEIGTLSPSLPE--NPFAQAFDTANIIVTL-RFIDPLWKLKKFLN-IGSEALLSKSIKVVDDFTYSVIRRR  255 (516)
T ss_pred             HHHHHHHhCCCccccccCCCc--cHHHHHHHHHHHHHHH-HHhcchhhHHHhcc-cchHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999988765432110  1222233222211100 0000111111 111 1122344556677888888888877


Q ss_pred             HhhhhhhhhhhhhcCCCCCCCchhHHHHHHhhccCccccCCCCHHHHHHHHHHHHHhcccchhhHHHHHHHHHhcCchHH
Q 009312          277 RNKDFVIEGEERAGNNIEGSRNKDFLQLLLELQDNEDSANSISMNQFKALLVDIITGGTDTTTTMVEWTMAELMQHPLVT  356 (538)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~  356 (538)
                      ++....    +  .. .......|+++.+++..++  .+..++++++.+++.++++||+|||+.+++|++|+|++||++|
T Consensus       256 ~~~~~~----~--~~-~~~~~~~d~l~~ll~~~~~--~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq  326 (516)
T PLN03195        256 KAEMDE----A--RK-SGKKVKHDILSRFIELGED--PDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVA  326 (516)
T ss_pred             HHHHhc----c--cc-ccccccccHHHHHHhccCC--CCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHH
Confidence            654310    0  00 0012356899999976432  2346899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcC--------------------CCccccccCCCchhHHHHHhhhccCCCCCcCcccccccCcccc-cCe
Q 009312          357 KKVHEELAEVVGM--------------------DSCVEEFHLPKLKYLDAVVKETFRLHPAQPLLVPHRASESSSI-GGY  415 (538)
Q Consensus       357 ~~lr~Ei~~~~~~--------------------~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l-~g~  415 (538)
                      +|+|+||+++++.                    ++.++++++++||||+|||+||||++|++|.. +|.+.+|.++ +||
T Consensus       327 ~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~-~r~~~~d~~~~~G~  405 (516)
T PLN03195        327 EKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQD-PKGILEDDVLPDGT  405 (516)
T ss_pred             HHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcch-hhhhccCcCcCCCc
Confidence            9999999988642                    23578889999999999999999999999995 5666666665 999


Q ss_pred             ecCCCCEEEeehhhhhcCCCCC-CCCCCCCCCcccCCCCCCccccCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHH
Q 009312          416 TIPKDTTLMLNVWAIHRDPRLW-DNPLEFRPERFLNDGIASKFDYSGKNFQYLPFGSGRRKCAGIALAERLLMFVLASFL  494 (538)
Q Consensus       416 ~ip~G~~v~~~~~~~~~dp~~~-~dp~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll  494 (538)
                      .||||+.|.++++.+||||++| +||++|+||||++++...    ...+..|+|||+|+|.|+|++||++|++++++.++
T Consensus       406 ~IpkGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~~----~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll  481 (516)
T PLN03195        406 KVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGVFQ----NASPFKFTAFQAGPRICLGKDSAYLQMKMALALLC  481 (516)
T ss_pred             EECCCCEEEEehHhhccChhhhccChhhcCCcccCCCCCcC----CCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999 999999999999632101    12346799999999999999999999999999999


Q ss_pred             hhceeecCCCCCCccCcCcCceeccCCCeeeeeccCC
Q 009312          495 HSFEWKLPVGTKLDLSEKYGFVTKKKEPLVAIPTPRL  531 (538)
Q Consensus       495 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  531 (538)
                      ++|++++.++.++.  .....+..++.+++|++++|+
T Consensus       482 ~~f~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        482 RFFKFQLVPGHPVK--YRMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             HhceeEecCCCcce--eeeeeEEecCCCEEEEEEeCC
Confidence            99999987665443  233456778899999999985


No 25 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=9.2e-71  Score=544.55  Aligned_cols=452  Identities=20%  Similarity=0.292  Sum_probs=348.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCcccccccCCCCCChhHHHHHHHHhhCCeEEEeccCeeEEEec
Q 009312           12 ETAIITCLVAVVAVVYFAWNVNKSSKANAKLPPGQRGLPVVGYLPFLGTTDLHKTFNDLSGVYGPIFKLWFGNKLCVVVS   91 (538)
Q Consensus        12 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~pgp~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~v~~~~~~~v~v~   91 (538)
                      .+.+.+|+++.++.++..+  .+....+.+.||||+++|++||+..+..++++.++.+++++||++|+++++++++|+|+
T Consensus         8 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~   85 (463)
T PLN02196          8 LTLFAGALFLCLLRFLAGF--RRSSSTKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMIS   85 (463)
T ss_pred             hHHHHHHHHHHHHHHHHHh--ccCCCCCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEc
Confidence            3344444444333333332  23444566889999999999998776467889999999999999999999999999999


Q ss_pred             CHHHHHHHHHhCCccccCCCcccccchhccCCCceecCCCChhhHHHHhhhhhhcCchhhHHHhHHHHHHHHHHHHHHHH
Q 009312           92 SPSLVKQVVHDQDLTFSNRSPSIAGLVTTYGGNDIALSNYGSQWRKLRKLFVGKLMSNTSLDACYALRKQEVKNTIRDLY  171 (538)
Q Consensus        92 dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~  171 (538)
                      ||+++++|+.++...|...  ......... |...++..+|+.|+++||.+ .+.|+++.++.+.+.+.+.++++++.+ 
T Consensus        86 ~p~~~~~vl~~~~~~~~~~--~~~~~~~~~-g~~~l~~~~g~~w~~~Rk~l-~~~f~~~~l~~~~~~i~~~~~~~~~~~-  160 (463)
T PLN02196         86 SPEAAKFVLVTKSHLFKPT--FPASKERML-GKQAIFFHQGDYHAKLRKLV-LRAFMPDAIRNMVPDIESIAQESLNSW-  160 (463)
T ss_pred             CHHHHHHHHhCCCCccccc--CchHHHHHc-CcccccccCcHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHcC-
Confidence            9999999998876655321  111111122 33344556799999999998 588999999999999999988888765 


Q ss_pred             hhccccCCCCCCCccchHHhHHHHHHHHHHHhhhccchhhhccccchhHHHHHHHHHHHHHhhCCcccccccccccccch
Q 009312          172 NSDRDNIGNGSGNPIDIGELSNSTLVCVMKNMLWGEALELREKGITNLGAELKFKFAEFMVLLGTPNISDIFPVLSWLDI  251 (538)
Q Consensus       172 ~~~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~  251 (538)
                                .++.+|+.++++.+++++++.++||.+.....    .........+..         ....+|+.  ++.
T Consensus       161 ----------~~~~v~~~~~~~~~~~~v~~~~~fG~~~~~~~----~~~~~~~~~~~~---------~~~~~~~~--~p~  215 (463)
T PLN02196        161 ----------EGTQINTYQEMKTYTFNVALLSIFGKDEVLYR----EDLKRCYYILEK---------GYNSMPIN--LPG  215 (463)
T ss_pred             ----------CCCeEEeHHHHHHHHHHHHHHHHcCCCCchHH----HHHHHHHHHHhc---------chhccccc--CCC
Confidence                      33468999999999999999999998743211    111111111111         01112321  111


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhcCCCCCCCchhHHHHHHhhccCccccCCCCHHHHHHHHHHHH
Q 009312          252 QGIERRAQKISLWLEDVINSTVEQYRNKDFVIEGEERAGNNIEGSRNKDFLQLLLELQDNEDSANSISMNQFKALLVDII  331 (538)
Q Consensus       252 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~  331 (538)
                       ...++..++.+.+.+++.+.++++++..               ....|+++.+++.      +..++++++.+++.+++
T Consensus       216 -~~~~~~~~a~~~~~~~~~~~i~~~~~~~---------------~~~~d~l~~ll~~------~~~l~~~ei~~~~~~~~  273 (463)
T PLN02196        216 -TLFHKSMKARKELAQILAKILSKRRQNG---------------SSHNDLLGSFMGD------KEGLTDEQIADNIIGVI  273 (463)
T ss_pred             -ccchHHHHHHHHHHHHHHHHHHHHhhcC---------------CCcccHHHHHHhc------CCCCCHHHHHHHHHHHH
Confidence             1124556677788888888887665421               1246899999853      23589999999999999


Q ss_pred             HhcccchhhHHHHHHHHHhcCchHHHHHHHHHHHHhcC---CCccccccCCCchhHHHHHhhhccCCCCCcCcccccccC
Q 009312          332 TGGTDTTTTMVEWTMAELMQHPLVTKKVHEELAEVVGM---DSCVEEFHLPKLKYLDAVVKETFRLHPAQPLLVPHRASE  408 (538)
Q Consensus       332 ~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~---~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~  408 (538)
                      +||+|||+.+++|++++|++||++|+|+++|++++.+.   ++.++++++++|||++|||+||||++|+++.. .|.+.+
T Consensus       274 ~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~-~R~~~~  352 (463)
T PLN02196        274 FAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFT-FREAVE  352 (463)
T ss_pred             HhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCcccc-ceeecc
Confidence            99999999999999999999999999999999998864   35578889999999999999999999999985 599999


Q ss_pred             cccccCeecCCCCEEEeehhhhhcCCCCCCCCCCCCCCcccCCCCCCccccCCCCcceeccCCCCCCCccHHHHHHHHHH
Q 009312          409 SSSIGGYTIPKDTTLMLNVWAIHRDPRLWDNPLEFRPERFLNDGIASKFDYSGKNFQYLPFGSGRRKCAGIALAERLLMF  488 (538)
Q Consensus       409 ~~~l~g~~ip~G~~v~~~~~~~~~dp~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~  488 (538)
                      |++++||.||||+.|+++++.+||||++|+||++|+||||++.         ..+..++|||+|+|.|+|++||++|+++
T Consensus       353 d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~---------~~~~~~lpFG~G~r~C~G~~~A~~e~~~  423 (463)
T PLN02196        353 DVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVA---------PKPNTFMPFGNGTHSCPGNELAKLEISV  423 (463)
T ss_pred             ccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCC---------CCCCcccCcCCCCCCCchHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999862         1345799999999999999999999999


Q ss_pred             HHHHHHhhceeecCCCCCCccCcCcCceeccCCCeeeeeccC
Q 009312          489 VLASFLHSFEWKLPVGTKLDLSEKYGFVTKKKEPLVAIPTPR  530 (538)
Q Consensus       489 ~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  530 (538)
                      ++++|+++|+|++.++. .+..  ...+..|+++++|+++.+
T Consensus       424 ~la~ll~~f~~~~~~~~-~~~~--~~~~~~p~~~~~~~~~~~  462 (463)
T PLN02196        424 LIHHLTTKYRWSIVGTS-NGIQ--YGPFALPQNGLPIALSRK  462 (463)
T ss_pred             HHHHHHHhcEEEEcCCC-CceE--EcccccCCCCceEEEecC
Confidence            99999999999986542 2222  233456888999998754


No 26 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=1.9e-69  Score=534.62  Aligned_cols=439  Identities=21%  Similarity=0.290  Sum_probs=338.7

Q ss_pred             CCCCCCCCCCCCCCcccccccCCC----CCChhHHHHHHHHhhCCeEEEeccCeeEEEecCHHHHHHHHHhCCccccCCC
Q 009312           36 SKANAKLPPGQRGLPVVGYLPFLG----TTDLHKTFNDLSGVYGPIFKLWFGNKLCVVVSSPSLVKQVVHDQDLTFSNRS  111 (538)
Q Consensus        36 ~~~~~~~~pgp~~~p~lG~~~~~~----~~~~~~~~~~~~~kyG~v~~v~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~  111 (538)
                      +.++.+.||||.++|++||++.+.    ..+++.++.+++++||+||++++|++++|+|+||++++++|.+++..|..+.
T Consensus         2 ~~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~   81 (452)
T PLN03141          2 SKKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAY   81 (452)
T ss_pred             CCCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccC
Confidence            356777899999999999998763    2467889999999999999999999999999999999999998877666443


Q ss_pred             cccccchhccCCCceecCCCChhhHHHHhhhhhhcCchhhHHH-hHHHHHHHHHHHHHHHHhhccccCCCCCCCccchHH
Q 009312          112 PSIAGLVTTYGGNDIALSNYGSQWRKLRKLFVGKLMSNTSLDA-CYALRKQEVKNTIRDLYNSDRDNIGNGSGNPIDIGE  190 (538)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~vdl~~  190 (538)
                      .......   .|.+.++..+|+.|+++|+.+ .+.|+...+.. ..+.+.+.+.++++.+.          ++..+|+.+
T Consensus        82 ~~~~~~l---~g~~~~~~~~g~~wr~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~  147 (452)
T PLN03141         82 PKSLTEL---MGKSSILLINGSLQRRVHGLI-GAFLKSPHLKAQITRDMERYVSESLDSWR----------DDPPVLVQD  147 (452)
T ss_pred             chhHHHH---hCcccccccCcHHHHHHHHHH-HHhcCcHHHHHHHHHHHHHHHHHHHHhcc----------CCCCEEhHH
Confidence            2212112   233334555799999999998 57777666654 34455555555554431          455789999


Q ss_pred             hHHHHHHHHHHHhhhccchhhhccccchhHHHHHHHHHHHHHhhCCcccccccccccccchhhHHHHHHHHHHHHHHHHH
Q 009312          191 LSNSTLVCVMKNMLWGEALELREKGITNLGAELKFKFAEFMVLLGTPNISDIFPVLSWLDIQGIERRAQKISLWLEDVIN  270 (538)
Q Consensus       191 ~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~l~~~~~  270 (538)
                      .+..+++++++.++||.+.+..       ...+...+..+.....      .+|+  +++.... .+..++.+.+.+++.
T Consensus       148 ~~~~~~~~vi~~~~~G~~~~~~-------~~~~~~~~~~~~~~~~------~~~~--~~p~~~~-~~~~~~~~~l~~~~~  211 (452)
T PLN03141        148 ETKKIAFEVLVKALISLEPGEE-------MEFLKKEFQEFIKGLM------SLPI--KLPGTRL-YRSLQAKKRMVKLVK  211 (452)
T ss_pred             HHHHHHHHHHHHHHcCCCchHH-------HHHHHHHHHHHhhhHH------hCcc--CCCchHh-HHHHHHHHHHHHHHH
Confidence            9999999999999999765322       1222223332222111      1121  1111111 334466888889999


Q ss_pred             HHHHHHHhhhhhhhhhhhhcCCCCCCCchhHHHHHHhhccCccccCCCCHHHHHHHHHHHHHhcccchhhHHHHHHHHHh
Q 009312          271 STVEQYRNKDFVIEGEERAGNNIEGSRNKDFLQLLLELQDNEDSANSISMNQFKALLVDIITGGTDTTTTMVEWTMAELM  350 (538)
Q Consensus       271 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~  350 (538)
                      +.++++++..      +.... .......|+++.+++..     +..+++++++.++.++++||+|||+.+++|++++|+
T Consensus       212 ~~i~~~~~~~------~~~~~-~~~~~~~d~l~~ll~~~-----~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~  279 (452)
T PLN03141        212 KIIEEKRRAM------KNKEE-DETGIPKDVVDVLLRDG-----SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLS  279 (452)
T ss_pred             HHHHHHHHHH------hccCc-cccCChhhHHHHHHhcC-----CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHH
Confidence            9998876543      10000 00112468999999753     235899999999999999999999999999999999


Q ss_pred             cCchHHHHHHHHHHHHhc----CCCccccccCCCchhHHHHHhhhccCCCCCcCcccccccCcccccCeecCCCCEEEee
Q 009312          351 QHPLVTKKVHEELAEVVG----MDSCVEEFHLPKLKYLDAVVKETFRLHPAQPLLVPHRASESSSIGGYTIPKDTTLMLN  426 (538)
Q Consensus       351 ~~p~~~~~lr~Ei~~~~~----~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~  426 (538)
                      +||++|+++++|++++++    .++.++.+++.+||||+|||+|+||++|+++. ++|.+.+|++++||.||||+.|+++
T Consensus       280 ~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~l~g~~IPkG~~V~~~  358 (452)
T PLN03141        280 DCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIING-VMRKAMKDVEIKGYLIPKGWCVLAY  358 (452)
T ss_pred             hChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCC-cceeecCCeeECCEEECCCCEEEEe
Confidence            999999999999998864    23457788999999999999999999999985 6899999999999999999999999


Q ss_pred             hhhhhcCCCCCCCCCCCCCCcccCCCCCCccccCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHhhceeecCCCCC
Q 009312          427 VWAIHRDPRLWDNPLEFRPERFLNDGIASKFDYSGKNFQYLPFGSGRRKCAGIALAERLLMFVLASFLHSFEWKLPVGTK  506 (538)
Q Consensus       427 ~~~~~~dp~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~  506 (538)
                      ++.+||||++|+||++|+||||++++        ..+..|+|||+|+|.|+|++||++|+++++++|+++|+++++++..
T Consensus       359 ~~~~~~d~~~~~dP~~F~PeRfl~~~--------~~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~  430 (452)
T PLN03141        359 FRSVHLDEENYDNPYQFNPWRWQEKD--------MNNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTI  430 (452)
T ss_pred             hHhccCCchhcCCccccCcccccCCC--------CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCe
Confidence            99999999999999999999999731        1356799999999999999999999999999999999999876543


Q ss_pred             CccCcCcCceeccCCCeeeeeccC
Q 009312          507 LDLSEKYGFVTKKKEPLVAIPTPR  530 (538)
Q Consensus       507 ~~~~~~~~~~~~~~~~~~~~~~~r  530 (538)
                      +.     ..++.|..++.+++++|
T Consensus       431 ~~-----~~~~~~~~~~~~~~~~~  449 (452)
T PLN03141        431 VN-----FPTVRMKRKLPIWVTRI  449 (452)
T ss_pred             ee-----cccccCCCCceEEEEeC
Confidence            21     24778889999999998


No 27 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=1.5e-68  Score=536.59  Aligned_cols=443  Identities=24%  Similarity=0.348  Sum_probs=343.5

Q ss_pred             cCCCCCCCCCCCCCCcccccccCCC----CCChhHHHHHHHHhhCC--eEEEeccCeeEEEecCHHHHHHHHHhCCcccc
Q 009312           35 SSKANAKLPPGQRGLPVVGYLPFLG----TTDLHKTFNDLSGVYGP--IFKLWFGNKLCVVVSSPSLVKQVVHDQDLTFS  108 (538)
Q Consensus        35 ~~~~~~~~~pgp~~~p~lG~~~~~~----~~~~~~~~~~~~~kyG~--v~~v~~~~~~~v~v~dp~~~~~i~~~~~~~~~  108 (538)
                      ......+.||||+++|++|+++.+.    ..+++.++.+++++||+  +|++++++.+.++++||+++++|+.+++ .|.
T Consensus        36 ~~~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~~-~f~  114 (490)
T PLN02302         36 LGEGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDDD-AFE  114 (490)
T ss_pred             hccCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCCC-ccc
Confidence            3445567899999999999987652    34678899999999997  7999999999999999999999998763 454


Q ss_pred             CCCcccccchhccCCCceecCCCChhhHHHHhhhhhhcC-chhhHHHhHHHHHHHHHHHHHHHHhhccccCCCCCCCccc
Q 009312          109 NRSPSIAGLVTTYGGNDIALSNYGSQWRKLRKLFVGKLM-SNTSLDACYALRKQEVKNTIRDLYNSDRDNIGNGSGNPID  187 (538)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~-~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~vd  187 (538)
                      .+.......   ..|.+.+...+|+.|+++|+.+. +.| +++.++.+.+.+.+++.++++.+.          +++.+|
T Consensus       115 ~~~~~~~~~---~~g~~~~~~~~g~~w~~~R~~~~-~~f~~~~~l~~~~~~i~~~v~~~~~~~~----------~~~~v~  180 (490)
T PLN02302        115 PGWPESTVE---LIGRKSFVGITGEEHKRLRRLTA-APVNGPEALSTYIPYIEENVKSCLEKWS----------KMGEIE  180 (490)
T ss_pred             cCCchhHHH---HhccccccccCcHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHhc----------CCCCEe
Confidence            332221111   12334445567999999999984 666 578899999999999999998874          233599


Q ss_pred             hHHhHHHHHHHHHHHhhhccchhhhccccchhHHHHHHHHHHHHHhhCCcccccccccccccchhhHHHHHHHHHHHHHH
Q 009312          188 IGELSNSTLVCVMKNMLWGEALELREKGITNLGAELKFKFAEFMVLLGTPNISDIFPVLSWLDIQGIERRAQKISLWLED  267 (538)
Q Consensus       188 l~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~l~~  267 (538)
                      +.+++..++++++++++||.+.+....       .+...+......+..  ....+|..      . .++..++.+.+.+
T Consensus       181 ~~~~~~~~~~~vi~~~~~G~~~~~~~~-------~~~~~~~~~~~~~~~--~~~~~p~~------~-~~~~~~~~~~l~~  244 (490)
T PLN02302        181 FLTELRKLTFKIIMYIFLSSESELVME-------ALEREYTTLNYGVRA--MAINLPGF------A-YHRALKARKKLVA  244 (490)
T ss_pred             hHHHHHHHHHHHHHHHHcCCCChHHHH-------HHHHHHHHHHHHhhh--CCcCCCch------h-hHHHHHHHHHHHH
Confidence            999999999999999999987643321       121212111111100  00111211      1 1333455667778


Q ss_pred             HHHHHHHHHHhhhhhhhhhhhhcCCCCCCCchhHHHHHHhhccCccccCCCCHHHHHHHHHHHHHhcccchhhHHHHHHH
Q 009312          268 VINSTVEQYRNKDFVIEGEERAGNNIEGSRNKDFLQLLLELQDNEDSANSISMNQFKALLVDIITGGTDTTTTMVEWTMA  347 (538)
Q Consensus       268 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~  347 (538)
                      ++.+.++++++..      +.    .......|+++.+++..++  .+..+++++++.++..+++||+|||+.+++|+++
T Consensus       245 ~~~~~i~~~~~~~------~~----~~~~~~~d~l~~ll~~~~~--~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~  312 (490)
T PLN02302        245 LFQSIVDERRNSR------KQ----NISPRKKDMLDLLLDAEDE--NGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATI  312 (490)
T ss_pred             HHHHHHHHHHHhh------hc----cCCCCcCCHHHHHHhhhcc--CCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            8888887776543      10    0012357999999986543  2346899999999999999999999999999999


Q ss_pred             HHhcCchHHHHHHHHHHHHhcCC----CccccccCCCchhHHHHHhhhccCCCCCcCcccccccCcccccCeecCCCCEE
Q 009312          348 ELMQHPLVTKKVHEELAEVVGMD----SCVEEFHLPKLKYLDAVVKETFRLHPAQPLLVPHRASESSSIGGYTIPKDTTL  423 (538)
Q Consensus       348 ~L~~~p~~~~~lr~Ei~~~~~~~----~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v  423 (538)
                      +|++||++|+|+++|++.+++..    ..++++++++||||+|||+|+||++|++|. .+|.+.+|++++||.||||+.|
T Consensus       313 ~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~Ip~Gt~v  391 (490)
T PLN02302        313 FLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLT-VFREAKTDVEVNGYTIPKGWKV  391 (490)
T ss_pred             HHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCccc-chhcccCCEeECCEEECCCCEE
Confidence            99999999999999999998642    126788999999999999999999999998 5799999999999999999999


Q ss_pred             EeehhhhhcCCCCCCCCCCCCCCcccCCCCCCccccCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHhhceeecCC
Q 009312          424 MLNVWAIHRDPRLWDNPLEFRPERFLNDGIASKFDYSGKNFQYLPFGSGRRKCAGIALAERLLMFVLASFLHSFEWKLPV  503 (538)
Q Consensus       424 ~~~~~~~~~dp~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~  503 (538)
                      .++.+.+||||++|+||++|+||||++.+        ..+..++|||+|+|.|+|++||..|+++++++++++|++++.+
T Consensus       392 ~~~~~~~~rd~~~~~dP~~F~PeR~~~~~--------~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~  463 (490)
T PLN02302        392 LAWFRQVHMDPEVYPNPKEFDPSRWDNYT--------PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLN  463 (490)
T ss_pred             EeeHHHhcCCcccCCCccccChhhcCCCC--------CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcC
Confidence            99999999999999999999999999621        1346799999999999999999999999999999999999875


Q ss_pred             CCCCccCcCcCceeccCCCeeeeeccCCC
Q 009312          504 GTKLDLSEKYGFVTKKKEPLVAIPTPRLP  532 (538)
Q Consensus       504 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  532 (538)
                      +.. +..  ...+..|.+++.+++++|.+
T Consensus       464 ~~~-~~~--~~~~~~p~~~~~~~~~~~~~  489 (490)
T PLN02302        464 PGC-KVM--YLPHPRPKDNCLARITKVAS  489 (490)
T ss_pred             CCC-cce--eCCCCCCCCCceEEEEeccC
Confidence            421 222  22247888899999999875


No 28 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=1.7e-68  Score=525.97  Aligned_cols=457  Identities=21%  Similarity=0.302  Sum_probs=344.0

Q ss_pred             HHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCcccccccCCC----CCChhHHHHHHHHhhCCeEEEeccCeeEEEec
Q 009312           16 ITCLVAVVAVVYFAWNVNKSSKANAKLPPGQRGLPVVGYLPFLG----TTDLHKTFNDLSGVYGPIFKLWFGNKLCVVVS   91 (538)
Q Consensus        16 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~pgp~~~p~lG~~~~~~----~~~~~~~~~~~~~kyG~v~~v~~~~~~~v~v~   91 (538)
                      ++.+++.+.+++.+|.. +....+.+.||||.++|++||++.+.    ..++..++.+++++||++|+++++++++++|+
T Consensus         6 ~~~~~~~~~~~~~~~~~-~~~~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~   84 (472)
T PLN02987          6 FLLLLSSLAAIFFLLLR-RTRYRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSA   84 (472)
T ss_pred             HHHHHHHHHHHHHHHHH-hhccCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEe
Confidence            34444444444444443 23344556799999999999998762    24678889999999999999999999999999


Q ss_pred             CHHHHHHHHHhCCccccCCCcccccchhccCCCceecCCCChhhHHHHhhhhhhcCchhhHHHhHHHHHHHHHHHHHHHH
Q 009312           92 SPSLVKQVVHDQDLTFSNRSPSIAGLVTTYGGNDIALSNYGSQWRKLRKLFVGKLMSNTSLDACYALRKQEVKNTIRDLY  171 (538)
Q Consensus        92 dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~  171 (538)
                      ||+++++++.++...|..+........+  ++.+++++ +|+.|+++|+.+ .++++...++.+.   .+++.++++...
T Consensus        85 ~pe~~~~il~~~~~~f~~~~~~~~~~~l--g~~~l~~~-~g~~wr~~R~~~-~~f~~~~~~~~~~---~~~~~~~~~~~~  157 (472)
T PLN02987         85 DPETNRFILQNEGKLFECSYPGSISNLL--GKHSLLLM-KGNLHKKMHSLT-MSFANSSIIKDHL---LLDIDRLIRFNL  157 (472)
T ss_pred             CHHHHHHHHhCCCceEEecCcHHHHHHh--Cccccccc-CcHHHHHHHHHH-HHhcChHHHHHHH---HHHHHHHHHHHH
Confidence            9999999999887677544322222222  23455554 699999999997 4555555554433   222333433322


Q ss_pred             hhccccCCCCCCCccchHHhHHHHHHHHHHHhhhccchhhhccccchhHHHHHHHHHHHHHhhCCcccccccccccccch
Q 009312          172 NSDRDNIGNGSGNPIDIGELSNSTLVCVMKNMLWGEALELREKGITNLGAELKFKFAEFMVLLGTPNISDIFPVLSWLDI  251 (538)
Q Consensus       172 ~~~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~  251 (538)
                      ..        ...++++.+.+..++++++++++||.+.+....       .+...+.......    ....+|++.    
T Consensus       158 ~~--------~~~~v~~~~~~~~~t~~vi~~~~fg~~~~~~~~-------~~~~~~~~~~~~~----~~~~~p~l~----  214 (472)
T PLN02987        158 DS--------WSSRVLLMEEAKKITFELTVKQLMSFDPGEWTE-------SLRKEYVLVIEGF----FSVPLPLFS----  214 (472)
T ss_pred             Hh--------hccceehHHHHHHHHHHHHHHHHcCCCChHHHH-------HHHHHHHHHHhhh----hcCCCcCCC----
Confidence            21        123689999999999999999999976543221       1111222111111    111234431    


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhcCCCCCCCchhHHHHHHhhccCccccCCCCHHHHHHHHHHHH
Q 009312          252 QGIERRAQKISLWLEDVINSTVEQYRNKDFVIEGEERAGNNIEGSRNKDFLQLLLELQDNEDSANSISMNQFKALLVDII  331 (538)
Q Consensus       252 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~  331 (538)
                       ...++..+..+.+.+++.+.++++++..      .     .+.....|+++.+++..      ..++++++++++.+++
T Consensus       215 -~~~~~~~~~~~~~~~~~~~~i~~r~~~~------~-----~~~~~~~d~l~~ll~~~------~~~~~~ei~~~~~~l~  276 (472)
T PLN02987        215 -TTYRRAIQARTKVAEALTLVVMKRRKEE------E-----EGAEKKKDMLAALLASD------DGFSDEEIVDFLVALL  276 (472)
T ss_pred             -chHHHHHHHHHHHHHHHHHHHHHHHhhh------h-----ccCcccccHHHHHHhcC------CCCCHHHHHHHHHHHH
Confidence             1245667788889999999998876543      1     00123569999999753      2589999999999999


Q ss_pred             HhcccchhhHHHHHHHHHhcCchHHHHHHHHHHHHhcC---CCccccccCCCchhHHHHHhhhccCCCCCcCcccccccC
Q 009312          332 TGGTDTTTTMVEWTMAELMQHPLVTKKVHEELAEVVGM---DSCVEEFHLPKLKYLDAVVKETFRLHPAQPLLVPHRASE  408 (538)
Q Consensus       332 ~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~---~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~  408 (538)
                      +||+|||+.+++|++++|++||++|+++++|++.+.+.   +..++.+++.+|||++||++||||++|+++. .+|++.+
T Consensus       277 ~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~-~~R~~~~  355 (472)
T PLN02987        277 VAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGG-IFRRAMT  355 (472)
T ss_pred             HhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCC-ccccCCC
Confidence            99999999999999999999999999999999998752   3456788999999999999999999999986 6799999


Q ss_pred             cccccCeecCCCCEEEeehhhhhcCCCCCCCCCCCCCCcccCCCCCCccccCCCCcceeccCCCCCCCccHHHHHHHHHH
Q 009312          409 SSSIGGYTIPKDTTLMLNVWAIHRDPRLWDNPLEFRPERFLNDGIASKFDYSGKNFQYLPFGSGRRKCAGIALAERLLMF  488 (538)
Q Consensus       409 ~~~l~g~~ip~G~~v~~~~~~~~~dp~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~  488 (538)
                      |++++||.||+|+.|+++++.+||||++|+||++||||||++.+..     ......++|||+|+|.|||++||+.|+++
T Consensus       356 d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~-----~~~~~~~l~FG~G~r~C~G~~lA~~e~~~  430 (472)
T PLN02987        356 DIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGT-----TVPSNVFTPFGGGPRLCPGYELARVALSV  430 (472)
T ss_pred             CeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCC-----CCCCcceECCCCCCcCCCcHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999973221     11345799999999999999999999999


Q ss_pred             HHHHHHhhceeecCCCCCCccCcCcCceeccCCCeeeeeccCC
Q 009312          489 VLASFLHSFEWKLPVGTKLDLSEKYGFVTKKKEPLVAIPTPRL  531 (538)
Q Consensus       489 ~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  531 (538)
                      +++.|+++|+++++++.++.    +..++.|.+++++++++|-
T Consensus       431 ~la~ll~~f~~~~~~~~~~~----~~~~~~p~~~~~~~~~~r~  469 (472)
T PLN02987        431 FLHRLVTRFSWVPAEQDKLV----FFPTTRTQKRYPINVKRRD  469 (472)
T ss_pred             HHHHHHhceEEEECCCCcee----ecccccCCCCceEEEEecc
Confidence            99999999999987665432    2347888889999999983


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=6e-68  Score=527.62  Aligned_cols=460  Identities=21%  Similarity=0.323  Sum_probs=351.4

Q ss_pred             CCCCCCCCcccccccCCC----CCChhHHHHHHHHhhCCeEEEeccCeeEEEecCHHHHHHHHHhCCccccCCCcccccc
Q 009312           42 LPPGQRGLPVVGYLPFLG----TTDLHKTFNDLSGVYGPIFKLWFGNKLCVVVSSPSLVKQVVHDQDLTFSNRSPSIAGL  117 (538)
Q Consensus        42 ~~pgp~~~p~lG~~~~~~----~~~~~~~~~~~~~kyG~v~~v~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~  117 (538)
                      +=.|..+||++|..+.+.    ++.++..+.+++++||+||++++|+.+.++++||+++++|+.+.+..|..+.......
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~   92 (489)
T PLN02936         13 LWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSE   92 (489)
T ss_pred             cCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhH
Confidence            345778899999876542    5678999999999999999999999999999999999999987665666543221111


Q ss_pred             hhccCCCceecCCCChhhHHHHhhhhhhcCchhhHHHhHH-HHHHHHHHHHHHHHhhccccCCCCCCCccchHHhHHHHH
Q 009312          118 VTTYGGNDIALSNYGSQWRKLRKLFVGKLMSNTSLDACYA-LRKQEVKNTIRDLYNSDRDNIGNGSGNPIDIGELSNSTL  196 (538)
Q Consensus       118 ~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~~vdl~~~~~~~~  196 (538)
                        ...+.+++ ..+|+.|+++||.+ .+.|+...++.+.+ .+.++++.+++.+.+...      ++.++|+.++++.++
T Consensus        93 --~~~~~~i~-~~~g~~wk~~Rk~l-~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~------~g~~vd~~~~~~~~~  162 (489)
T PLN02936         93 --FLFGSGFA-IAEGELWTARRRAV-VPSLHRRYLSVMVDRVFCKCAERLVEKLEPVAL------SGEAVNMEAKFSQLT  162 (489)
T ss_pred             --HHhcCccc-cCCchHHHHHHHhh-cCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhc------CCCceeHHHHHHHHH
Confidence              11244544 45699999999998 68888888887755 678889999999876543      567899999999999


Q ss_pred             HHHHHHhhhccchhhhccccchhHHHHHHHHHHHHHhhCCcccccccccc-----cccchhhHHHHHHHHHHHHHHHHHH
Q 009312          197 VCVMKNMLWGEALELREKGITNLGAELKFKFAEFMVLLGTPNISDIFPVL-----SWLDIQGIERRAQKISLWLEDVINS  271 (538)
Q Consensus       197 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l-----~~l~~~~~~~~~~~~~~~l~~~~~~  271 (538)
                      +|+++.++||.+++..+.+ .+    +.+.+...+..... .....+|++     .++  .+..++..++.+.+.+++.+
T Consensus       163 ~dvi~~~~fG~~~~~~~~~-~~----~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~--~p~~~~~~~~~~~i~~~~~~  234 (489)
T PLN02936        163 LDVIGLSVFNYNFDSLTTD-SP----VIQAVYTALKEAET-RSTDLLPYWKVDFLCKI--SPRQIKAEKAVTVIRETVED  234 (489)
T ss_pred             HHHHHHHHcCCCccccccC-cH----HHHHHHHHHHHHHH-hhhccchHHhhHHHhcc--ChhhHHHHHHHHHHHHHHHH
Confidence            9999999999998765431 12    22222222211110 111123332     111  11235566777888888888


Q ss_pred             HHHHHHhhhhhhhhhhhhcC-CCCCCCchhHHHHHHhhccCccccCCCCHHHHHHHHHHHHHhcccchhhHHHHHHHHHh
Q 009312          272 TVEQYRNKDFVIEGEERAGN-NIEGSRNKDFLQLLLELQDNEDSANSISMNQFKALLVDIITGGTDTTTTMVEWTMAELM  350 (538)
Q Consensus       272 ~i~~~~~~~~~~~~~~~~~~-~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~  350 (538)
                      .++++++......  ..... +.......|+++.|++..+      .++.+++.+++.++++||+|||+.+++|++|+|+
T Consensus       235 ~i~~~~~~~~~~~--~~~~~~~~~~~~~~d~l~~ll~~~~------~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~  306 (489)
T PLN02936        235 LVDKCKEIVEAEG--EVIEGEEYVNDSDPSVLRFLLASRE------EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLS  306 (489)
T ss_pred             HHHHHHHHHhhcc--cccccccccccCchHHHHHHHhccc------cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence            8877665431100  00000 0001235789999996532      4889999999999999999999999999999999


Q ss_pred             cCchHHHHHHHHHHHHhcCCCccccccCCCchhHHHHHhhhccCCCCCcCcccccccCcccccCeecCCCCEEEeehhhh
Q 009312          351 QHPLVTKKVHEELAEVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPAQPLLVPHRASESSSIGGYTIPKDTTLMLNVWAI  430 (538)
Q Consensus       351 ~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~  430 (538)
                      +||++|+++|+|++++++. +.++++++++||||+|||+||||++|++|...+|.+..|+.++||.||+|+.|+++.+.+
T Consensus       307 ~~p~~~~kl~~Ei~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~  385 (489)
T PLN02936        307 KNPEALRKAQEELDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNI  385 (489)
T ss_pred             cCHHHHHHHHHHHHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhc
Confidence            9999999999999999874 457888999999999999999999999998777777788888999999999999999999


Q ss_pred             hcCCCCCCCCCCCCCCcccCCCCCCccccCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHhhceeecCCCCCCccC
Q 009312          431 HRDPRLWDNPLEFRPERFLNDGIASKFDYSGKNFQYLPFGSGRRKCAGIALAERLLMFVLASFLHSFEWKLPVGTKLDLS  510 (538)
Q Consensus       431 ~~dp~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~  510 (538)
                      ||||++|+||++|+||||++++....  ....+..|+|||+|+|.|||++||++|+++++++|+++|+++++++.++.  
T Consensus       386 ~rd~~~~~dP~~F~PeRwl~~~~~~~--~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~--  461 (489)
T PLN02936        386 HRSPEVWERAEEFVPERFDLDGPVPN--ETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDIV--  461 (489)
T ss_pred             cCChhhCCCccccCccccCCCCCCcc--ccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCccc--
Confidence            99999999999999999996322111  11234579999999999999999999999999999999999988765543  


Q ss_pred             cCcCceeccCCCeeeeeccCCC
Q 009312          511 EKYGFVTKKKEPLVAIPTPRLP  532 (538)
Q Consensus       511 ~~~~~~~~~~~~~~~~~~~r~~  532 (538)
                      ...+++..++++++|++++|--
T Consensus       462 ~~~~~~~~~~~~~~v~~~~R~~  483 (489)
T PLN02936        462 MTTGATIHTTNGLYMTVSRRRV  483 (489)
T ss_pred             eecceEEeeCCCeEEEEEeeeC
Confidence            2235667788899999998853


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=5.3e-66  Score=512.36  Aligned_cols=443  Identities=19%  Similarity=0.267  Sum_probs=335.1

Q ss_pred             CcccccccCCCCCChhHHHHHHHHhhC-CeEEEeccCeeEEEecCHHHHHHHHHhCCccccCCCcccccchhccCCCcee
Q 009312           49 LPVVGYLPFLGTTDLHKTFNDLSGVYG-PIFKLWFGNKLCVVVSSPSLVKQVVHDQDLTFSNRSPSIAGLVTTYGGNDIA  127 (538)
Q Consensus        49 ~p~lG~~~~~~~~~~~~~~~~~~~kyG-~v~~v~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (538)
                      .++.|++... ..+...++.++.++++ .+++++.++.  ++++||+++++|+.++...|.+...... ......|.|+ 
T Consensus        49 ~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~-~~~~~~g~gi-  123 (502)
T PLN02426         49 AYLTASWAKD-FDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSA-ILGDLLGRGI-  123 (502)
T ss_pred             CCccHHHHHh-cccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHH-HHHHhcCCce-
Confidence            4577887664 2456777777888887 5788876653  8999999999999887656654332211 1112235565 


Q ss_pred             cCCCChhhHHHHhhhhhhcCchhhHHHhH--HHHHHHHHHHHHHHHhhccccCCCCCCCccchHHhHHHHHHHHHHHhhh
Q 009312          128 LSNYGSQWRKLRKLFVGKLMSNTSLDACY--ALRKQEVKNTIRDLYNSDRDNIGNGSGNPIDIGELSNSTLVCVMKNMLW  205 (538)
Q Consensus       128 ~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~~f  205 (538)
                      ++.+|+.|+++||.+ ++.|+...++.+.  +.+.+..+.+++.+.+....    +++.++|+.++++.+++|+|+.++|
T Consensus       124 ~~~~g~~wk~~Rk~l-~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~----~~~~~vd~~~~~~~~t~dvi~~~~f  198 (502)
T PLN02426        124 FNVDGDSWRFQRKMA-SLELGSVSIRSYAFEIVASEIESRLLPLLSSAADD----GEGAVLDLQDVFRRFSFDNICKFSF  198 (502)
T ss_pred             eecCcHHHHHHHHHh-HhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----CCCceEcHHHHHHHHHHHHHHHHHh
Confidence            455699999999998 7999988888764  56667777787777654321    1346799999999999999999999


Q ss_pred             ccchhhhccccchhHHHHHHHHHHHHHhhCCcccccccccc----cccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 009312          206 GEALELREKGITNLGAELKFKFAEFMVLLGTPNISDIFPVL----SWLDIQGIERRAQKISLWLEDVINSTVEQYRNKDF  281 (538)
Q Consensus       206 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l----~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~  281 (538)
                      |.+++..+.+.  ....+...+......... .....+|++    ++++ .+..++..++.+.+.+++.+.++++++.. 
T Consensus       199 G~~~~~l~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~I~~r~~~~-  273 (502)
T PLN02426        199 GLDPGCLELSL--PISEFADAFDTASKLSAE-RAMAASPLLWKIKRLLN-IGSERKLKEAIKLVDELAAEVIRQRRKLG-  273 (502)
T ss_pred             CCCCcccCCCC--CccHHHHHHHHHHHHHHH-HHhcchhHHHHHHHhcc-cchhHHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence            99987654311  112333444333221110 011112222    2222 22345667788888999999998876532 


Q ss_pred             hhhhhhhhcCCCCCCCchhHHHHHHhhccCccccCCCCHHHHHHHHHHHHHhcccchhhHHHHHHHHHhcCchHHHHHHH
Q 009312          282 VIEGEERAGNNIEGSRNKDFLQLLLELQDNEDSANSISMNQFKALLVDIITGGTDTTTTMVEWTMAELMQHPLVTKKVHE  361 (538)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~  361 (538)
                                   .....|+++.+++..        .+++++.+++.++++||+|||+.+++|++|+|++||++|+|+++
T Consensus       274 -------------~~~~~dll~~ll~~~--------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~  332 (502)
T PLN02426        274 -------------FSASKDLLSRFMASI--------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIRE  332 (502)
T ss_pred             -------------cCCcchHHHHHHhcC--------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHH
Confidence                         123479999999753        25788999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCC-CccccccCCCchhHHHHHhhhccCCCCCcCcccccccCcccc-cCeecCCCCEEEeehhhhhcCCCCC-C
Q 009312          362 ELAEVVGMD-SCVEEFHLPKLKYLDAVVKETFRLHPAQPLLVPHRASESSSI-GGYTIPKDTTLMLNVWAIHRDPRLW-D  438 (538)
Q Consensus       362 Ei~~~~~~~-~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l-~g~~ip~G~~v~~~~~~~~~dp~~~-~  438 (538)
                      |++++++.+ ..++++++++||||+|||+||||++|++|.. .|.+.+|.++ +||.||+|+.|.++++.+||||++| +
T Consensus       333 Ei~~~~~~~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~-~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~  411 (502)
T PLN02426        333 EADRVMGPNQEAASFEEMKEMHYLHAALYESMRLFPPVQFD-SKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGP  411 (502)
T ss_pred             HHHHhhCCCCCCCCHHHHhcChHHHHHHHHHHhCCCCCCCc-ceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCc
Confidence            999998753 3578999999999999999999999999985 5888888887 9999999999999999999999999 9


Q ss_pred             CCCCCCCCcccCCCCCCccccCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHhhceeecCCCCCCccCcCcCceec
Q 009312          439 NPLEFRPERFLNDGIASKFDYSGKNFQYLPFGSGRRKCAGIALAERLLMFVLASFLHSFEWKLPVGTKLDLSEKYGFVTK  518 (538)
Q Consensus       439 dp~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~  518 (538)
                      ||++|+||||++++..    ....+..++|||+|+|.|+|++||++|++++++.++++|++++.++.+.......++++.
T Consensus       412 dp~~F~PeRwl~~~~~----~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~  487 (502)
T PLN02426        412 DCLEFKPERWLKNGVF----VPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTAT  487 (502)
T ss_pred             ChhhcCccccCCCCCc----CCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEe
Confidence            9999999999973211    012346799999999999999999999999999999999999864432112233467889


Q ss_pred             cCCCeeeeeccCCC
Q 009312          519 KKEPLVAIPTPRLP  532 (538)
Q Consensus       519 ~~~~~~~~~~~r~~  532 (538)
                      +++++++++++|+.
T Consensus       488 ~~~gl~v~~~~r~~  501 (502)
T PLN02426        488 VRGGLPVRVRERVR  501 (502)
T ss_pred             cCCCEEEEEEEccC
Confidence            99999999999965


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=2.9e-58  Score=449.39  Aligned_cols=414  Identities=16%  Similarity=0.185  Sum_probs=293.8

Q ss_pred             CCCCCCCCCCCCCcccccccCCC----CCChhHHHHHHHHhhCC-eEEEeccCeeE-------EEecCHHHHHHHHHh--
Q 009312           37 KANAKLPPGQRGLPVVGYLPFLG----TTDLHKTFNDLSGVYGP-IFKLWFGNKLC-------VVVSSPSLVKQVVHD--  102 (538)
Q Consensus        37 ~~~~~~~pgp~~~p~lG~~~~~~----~~~~~~~~~~~~~kyG~-v~~v~~~~~~~-------v~v~dp~~~~~i~~~--  102 (538)
                      ..+.+.|||+.++|++|+...+.    ..++..++.+.++|||+ ||+++++|.|+       |+++||++++.+|.+  
T Consensus        13 ~~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~   92 (480)
T PLN02648         13 SLPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSK   92 (480)
T ss_pred             CCCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchh
Confidence            44567799999999999997542    45668999999999998 99999998666       999999999999975  


Q ss_pred             --CCccccCCCcccccchhccCCCc---eecCCCChhhHHHHhhhhhhcCchhhHHHhHHHHHHHHHHHHHHHHhhcccc
Q 009312          103 --QDLTFSNRSPSIAGLVTTYGGND---IALSNYGSQWRKLRKLFVGKLMSNTSLDACYALRKQEVKNTIRDLYNSDRDN  177 (538)
Q Consensus       103 --~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~  177 (538)
                        ++..+...... ....   .|.+   .++..+|+.|+++|+.+ .+.|+ ..++.+.+.|.+.+.++++.|.....  
T Consensus        93 ~~~~~~~~~~~~~-~~~l---~G~~~~~s~~~~~g~~H~r~Rrll-~~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~--  164 (480)
T PLN02648         93 VDKRDVFTGTYMP-STAF---TGGYRVLSYLDPSEPKHAKLKSFL-FELLK-SRHRRFIPEFRAAFAELFDTWEAELA--  164 (480)
T ss_pred             ccccccceeeecc-Cccc---cCCceeeeecCCCCchHHHHHHHH-HHHHH-HhhhhhhhHHHHHHHHHHHHHHHHHh--
Confidence              33333332221 1222   2333   55666799999999998 58888 47788999999999999999954322  


Q ss_pred             CCCCCCCccchHHhHHHHHHHHHHHhhhccchhhhccccchhHHHHHHHHHHHHHhhCCcccccccccccccchhhHHHH
Q 009312          178 IGNGSGNPIDIGELSNSTLVCVMKNMLWGEALELREKGITNLGAELKFKFAEFMVLLGTPNISDIFPVLSWLDIQGIERR  257 (538)
Q Consensus       178 ~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~  257 (538)
                          .+.++|+.+.+..+++|++++++||.+.+...     ....+...+.......       .+|.....        
T Consensus       165 ----~~~~vdv~~~~~~lt~~vi~~~lfG~~~~~~~-----l~~~~~~~~~~~~~~~-------~~p~~~~~--------  220 (480)
T PLN02648        165 ----KKGKAEFNDPLDQMAFNFLCKALTGKDPSETA-----LGSDGPALIQKWLALQ-------LAPLASTG--------  220 (480)
T ss_pred             ----hCCCccccchHHHHHHHHHHHHHcCCCcchhh-----hccchhHHHHHHHHHH-------hhHHHHcC--------
Confidence                44569999999999999999999998665410     1111111121111100       01110000        


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhcCCCCCCCch-------hHHHHHHhhccCccccCCCCHHHHHHHHHH-
Q 009312          258 AQKISLWLEDVINSTVEQYRNKDFVIEGEERAGNNIEGSRNK-------DFLQLLLELQDNEDSANSISMNQFKALLVD-  329 (538)
Q Consensus       258 ~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-------dll~~ll~~~~~~~~~~~l~~~~i~~~~~~-  329 (538)
                             +...+++.+.++......    .      ......       +.++.++...++    .+++++++.++++. 
T Consensus       221 -------l~~~~~~~i~~~~~~~~~----~------~~~~~~~~~~~~~~~~~~ll~~~~~----~~l~~~ei~~~~l~~  279 (480)
T PLN02648        221 -------LPHVLEELLLHTFPLPFF----L------VKSDYDKLYDFFRASATEALDLAEK----FGISREEALHNLLFV  279 (480)
T ss_pred             -------chHHHHHHhhcccCCchh----h------hhccHHHHHHHHHHHHHHHHHHHHh----cCCCHHHHHHHHHHH
Confidence                   001111111110000000    0      000011       112234433222    24899999999875 


Q ss_pred             HHHhcccchhhHHHHHHHHHhcCch-HHHHHHHHHHHHhcC-CCccccccCCCchhHHHHHhhhccCCCCCcCccccccc
Q 009312          330 IITGGTDTTTTMVEWTMAELMQHPL-VTKKVHEELAEVVGM-DSCVEEFHLPKLKYLDAVVKETFRLHPAQPLLVPHRAS  407 (538)
Q Consensus       330 ~~~ag~~tt~~~l~~~l~~L~~~p~-~~~~lr~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~  407 (538)
                      +.++|++|++++++|++|+|++||+ +|+++++|++++.+. +..++++++++||||++||+|+||++|+++.. .|++.
T Consensus       280 ~~~~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~-~r~a~  358 (480)
T PLN02648        280 LGFNAFGGFKIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQ-YGRAR  358 (480)
T ss_pred             HHHHhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccc-cceec
Confidence            4567788888999999999999995 999999999999863 45678899999999999999999999999985 57889


Q ss_pred             Cccccc----CeecCCCCEEEeehhhhhcCCCCCCCCCCCCCCcccCCCCCCccccC--CCCcceeccCCCCCCCccHHH
Q 009312          408 ESSSIG----GYTIPKDTTLMLNVWAIHRDPRLWDNPLEFRPERFLNDGIASKFDYS--GKNFQYLPFGSGRRKCAGIAL  481 (538)
Q Consensus       408 ~~~~l~----g~~ip~G~~v~~~~~~~~~dp~~~~dp~~F~P~R~l~~~~~~~~~~~--~~~~~~~~Fg~G~r~C~G~~~  481 (538)
                      +|++++    ||.||||+.|+++.+.+||||++|+||++|||+||++++........  +......+||+|+|.|+|++|
T Consensus       359 ~d~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~~~~~~~~f~~g~~~~~~G~G~R~C~G~~~  438 (480)
T PLN02648        359 EDFVIESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGEKLLKYVFWSNGRETESPTVGNKQCAGKDF  438 (480)
T ss_pred             CCEEEecCCceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCccccccccccCCCcccCCCCCCCccCccHHH
Confidence            999995    79999999999999999999999999999999999863211100000  001112334778899999999


Q ss_pred             HHHHHHHHHHHHHhhce-eecCCC
Q 009312          482 AERLLMFVLASFLHSFE-WKLPVG  504 (538)
Q Consensus       482 A~~e~~~~l~~ll~~~~-~~~~~~  504 (538)
                      |+.|+++++++|+++|+ +++.++
T Consensus       439 A~~e~~~~la~Ll~~f~~~~l~~~  462 (480)
T PLN02648        439 VVLVARLFVAELFLRYDSFEIEVD  462 (480)
T ss_pred             HHHHHHHHHHHHHHHhCEEeecCC
Confidence            99999999999999998 998655


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=3.1e-53  Score=409.71  Aligned_cols=383  Identities=28%  Similarity=0.381  Sum_probs=303.4

Q ss_pred             hhHHHHHHHHhhCCeEEEeccCee--EEEecCHHHHHHHHHhCCccccCCCccccc--chhccCCCceecCCCChhhHHH
Q 009312           63 LHKTFNDLSGVYGPIFKLWFGNKL--CVVVSSPSLVKQVVHDQDLTFSNRSPSIAG--LVTTYGGNDIALSNYGSQWRKL  138 (538)
Q Consensus        63 ~~~~~~~~~~kyG~v~~v~~~~~~--~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~w~~~  138 (538)
                      +........+.||.+++++..+.-  .++++++++++++++++. .+.........  ......|.++++..+|+.|.++
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~  102 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRL  102 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHH
Confidence            345566677889999888876544  799999999999999874 12111111111  1223334554667789999999


Q ss_pred             HhhhhhhcCchhhHHHhHHHHHHHHHHHHHHHHhhccccCCCCCCCccchHHhHHHHHHHHHHHhhhccchhhhccccch
Q 009312          139 RKLFVGKLMSNTSLDACYALRKQEVKNTIRDLYNSDRDNIGNGSGNPIDIGELSNSTLVCVMKNMLWGEALELREKGITN  218 (538)
Q Consensus       139 Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~  218 (538)
                      ||.+ .+.|++..++.+.+.+.+.++++++.+ .         .+..+++.+.+..+++++|+ .+||.+.+....    
T Consensus       103 Rkl~-~~~F~~~~~~~~~~~i~~~~~~~~~~~-~---------~~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~~~----  166 (411)
T COG2124         103 RKLL-APAFTPRALRGYRPLIREIADRLLDDL-W---------QGGADLVLDFAAELTLRVIA-ELLGVPLEDRPQ----  166 (411)
T ss_pred             HHHh-ccccCHHHHHHHHHHHHHHHHHHHHhc-c---------cCCchhHHHHhhhhhHHHHH-HHhCCCHHHHHH----
Confidence            9998 799999999999999999999999998 2         33677899999999999999 999988765542    


Q ss_pred             hHHHHHHHHHHHHHhhCCcccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhcCCCCCCCc
Q 009312          219 LGAELKFKFAEFMVLLGTPNISDIFPVLSWLDIQGIERRAQKISLWLEDVINSTVEQYRNKDFVIEGEERAGNNIEGSRN  298 (538)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  298 (538)
                          +...........        .|...   ......+..++.+.+.+++...+++++..                 ..
T Consensus       167 ----~~~~~~~~~~~~--------~~~~~---~~~~~~~~~~a~~~~~~~~~~li~~rR~~-----------------~~  214 (411)
T COG2124         167 ----LLRWSDALLLRL--------DPDLG---PEEPWRRARAARRELDAYLRALIAERRAA-----------------PR  214 (411)
T ss_pred             ----HHHHHHHHHhcc--------CcccC---CcccHHHHHHHHHHHHHHHHHHHHHhccC-----------------Cc
Confidence                122222211110        01111   11224667788889999999999987732                 36


Q ss_pred             hhHHHHHHhhccCccccCCCCHHHHHHHHHHHHHhcccchhhHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCccccccC
Q 009312          299 KDFLQLLLELQDNEDSANSISMNQFKALLVDIITGGTDTTTTMVEWTMAELMQHPLVTKKVHEELAEVVGMDSCVEEFHL  378 (538)
Q Consensus       299 ~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l  378 (538)
                      .|+++.++.+.++  ++..++++||.++++++++||+|||+++++|++|.|++||++++++++|.+.             
T Consensus       215 ~dlls~l~~a~~~--~~~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~-------------  279 (411)
T COG2124         215 DDLLSLLLSAEDD--GGGRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR-------------  279 (411)
T ss_pred             ccHHHHHHHHhhC--CCCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch-------------
Confidence            8999999988765  2226999999999999999999999999999999999999999999999765             


Q ss_pred             CCchhHHHHHhhhccCCCCCcCcccccccCcccccCeecCCCCEEEeehhhhhcCCCCCCCCCCCCCCcccCCCCCCccc
Q 009312          379 PKLKYLDAVVKETFRLHPAQPLLVPHRASESSSIGGYTIPKDTTLMLNVWAIHRDPRLWDNPLEFRPERFLNDGIASKFD  458 (538)
Q Consensus       379 ~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~dp~~~~dp~~F~P~R~l~~~~~~~~~  458 (538)
                         ||+.++|+|+||++|+++. .+|.+.+|++++|+.||||+.|.++++.+||||++|+||++|||+||.         
T Consensus       280 ---~~~~~~v~E~LR~~ppv~~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~---------  346 (411)
T COG2124         280 ---PLLEAVVEETLRLYPPVPL-ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN---------  346 (411)
T ss_pred             ---HHHHHHHHHHHHhCCchhc-cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC---------
Confidence               7999999999999999999 789999999999999999999999999999999999999999999995         


Q ss_pred             cCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHHHhhceeecCCCCCCccCcCcCceeccCCCeeeeeccC
Q 009312          459 YSGKNFQYLPFGSGRRKCAGIALAERLLMFVLASFLHSFEWKLPVGTKLDLSEKYGFVTKKKEPLVAIPTPR  530 (538)
Q Consensus       459 ~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  530 (538)
                           ..++|||+|+|.|+|..||++|++++++.++++|++...++ +  .......+..+.....+.++.|
T Consensus       347 -----~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~-~--~~~~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         347 -----NAHLPFGGGPHRCLGAALARLELKVALAELLRRFPLLLLAE-P--PPLVRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             -----CCCcCCCCCCccccCHHHHHHHHHHHHHHHHHhCchhhcCC-C--CCccccccccCCCcceeeeecC
Confidence                 35899999999999999999999999999999999887666 2  1122333455555566655544


No 33 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=70.36  E-value=12  Score=23.47  Aligned_cols=43  Identities=21%  Similarity=0.210  Sum_probs=35.5

Q ss_pred             HHHHHHHHHHHhcccchhhHHHHHHHHHhcCchHHHHHHHHHH
Q 009312          322 QFKALLVDIITGGTDTTTTMVEWTMAELMQHPLVTKKVHEELA  364 (538)
Q Consensus       322 ~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~  364 (538)
                      ++...+..++-.|.|..+-.++.-+.+..-||+..+.+..|++
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~elr   48 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKELR   48 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHhC
Confidence            4566677777788888888888888888899999999888863


No 34 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=56.61  E-value=3.5  Score=35.30  Aligned_cols=43  Identities=33%  Similarity=0.310  Sum_probs=33.2

Q ss_pred             chhHHHHHhhhccCCCCCcCcccccccCcccccCeecCCCCEEEe
Q 009312          381 LKYLDAVVKETFRLHPAQPLLVPHRASESSSIGGYTIPKDTTLML  425 (538)
Q Consensus       381 lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~  425 (538)
                      -..+.|||.|+.-+..-..+  .=+..+|+.++|..||||+.+..
T Consensus        52 ~n~I~A~V~~~qtv~~Gs~v--rlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   52 KNTIRAVVDGTQTVVDGSRV--RLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCeEEEEEecceEEeCCCEE--EEEEcCceEECCEEeCCCCEEEE
Confidence            34678999999887765443  22467899999999999998866


No 35 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=52.15  E-value=13  Score=24.30  Aligned_cols=25  Identities=32%  Similarity=0.415  Sum_probs=19.0

Q ss_pred             HHHHHHhcCchHHHHHHHHHHHHhc
Q 009312          344 WTMAELMQHPLVTKKVHEELAEVVG  368 (538)
Q Consensus       344 ~~l~~L~~~p~~~~~lr~Ei~~~~~  368 (538)
                      -++.||.+||++.+++.+.=.+++|
T Consensus         4 ~iV~YLv~nPevl~kl~~g~asLIG   28 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEGEASLIG   28 (57)
T ss_pred             HHHHHHHHChHHHHHHHcCCeeEec
Confidence            4678999999999999875444443


No 36 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=47.09  E-value=51  Score=25.05  Aligned_cols=43  Identities=19%  Similarity=0.318  Sum_probs=21.4

Q ss_pred             HHHHHHHHHHHHHHHhhhccCCCCCCCC----CCCC-CCcccccccCC
Q 009312           16 ITCLVAVVAVVYFAWNVNKSSKANAKLP----PGQR-GLPVVGYLPFL   58 (538)
Q Consensus        16 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~----pgp~-~~p~lG~~~~~   58 (538)
                      .+++++++++-++.|+..++..+.....    .++. .-|+.||+...
T Consensus         8 ~llLll~l~asl~~wr~~~rq~k~~~~~~~~~~~~~E~~p~YgNL~~~   55 (107)
T PF15330_consen    8 ALLLLLSLAASLLAWRMKQRQKKAGQYSERRSEQPTEDDPCYGNLELQ   55 (107)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhccccCCCCccccCCCCCCccccccccc
Confidence            3333444444555666544444333332    1222 36888887654


No 37 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=41.39  E-value=1.2e+02  Score=29.97  Aligned_cols=35  Identities=23%  Similarity=0.430  Sum_probs=18.5

Q ss_pred             HhhCCeEEEeccCeeEEE-ecCHHHHHHHHHhCCccc
Q 009312           72 GVYGPIFKLWFGNKLCVV-VSSPSLVKQVVHDQDLTF  107 (538)
Q Consensus        72 ~kyG~v~~v~~~~~~~v~-v~dp~~~~~i~~~~~~~~  107 (538)
                      -+||.|++-.+-++.+-| |...+. ++=+.++...|
T Consensus       221 Grfg~V~KaqL~~~~VAVKifp~~~-kqs~~~Ek~Iy  256 (534)
T KOG3653|consen  221 GRFGCVWKAQLDNRLVAVKIFPEQE-KQSFQNEKNIY  256 (534)
T ss_pred             CccceeehhhccCceeEEEecCHHH-HHHHHhHHHHH
Confidence            378888876666655544 343433 33334443343


No 38 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=35.24  E-value=35  Score=26.89  Aligned_cols=23  Identities=17%  Similarity=0.394  Sum_probs=16.9

Q ss_pred             CCCccHHHHHHHHHHHHHHHHhh
Q 009312          474 RKCAGIALAERLLMFVLASFLHS  496 (538)
Q Consensus       474 r~C~G~~~A~~e~~~~l~~ll~~  496 (538)
                      ..|.|+.||+..+-.++.+++..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            57999999999999999999853


No 39 
>PRK06789 flagellar motor switch protein; Validated
Probab=35.04  E-value=33  Score=23.96  Aligned_cols=41  Identities=7%  Similarity=0.101  Sum_probs=31.9

Q ss_pred             HHhhhccCCCCCcCcccccccCccc--ccCeecCCCCEEEeeh
Q 009312          387 VVKETFRLHPAQPLLVPHRASESSS--IGGYTIPKDTTLMLNV  427 (538)
Q Consensus       387 ~i~EtlRl~p~~~~~~~R~~~~~~~--l~g~~ip~G~~v~~~~  427 (538)
                      -++|-|.+.+-+-..+-|.+.+++.  ++|..|.+|..|.++-
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~~   63 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKNG   63 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEECC
Confidence            4788899998777666677766554  5899999999988753


No 40 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=32.62  E-value=28  Score=23.02  Aligned_cols=13  Identities=46%  Similarity=0.700  Sum_probs=8.4

Q ss_pred             CCCCCCCCCCCCCCcccC
Q 009312          433 DPRLWDNPLEFRPERFLN  450 (538)
Q Consensus       433 dp~~~~dp~~F~P~R~l~  450 (538)
                      ||.+-|     ||||||.
T Consensus        38 dp~~~P-----DPERWLP   50 (59)
T PF08492_consen   38 DPGKTP-----DPERWLP   50 (59)
T ss_pred             CCCCCC-----CccccCc
Confidence            555544     7888876


No 41 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=31.39  E-value=11  Score=36.18  Aligned_cols=44  Identities=27%  Similarity=0.269  Sum_probs=33.8

Q ss_pred             chhHHHHHhhhccCCCCCcCcccccccCcccccCeecCCCCEEEee
Q 009312          381 LKYLDAVVKETFRLHPAQPLLVPHRASESSSIGGYTIPKDTTLMLN  426 (538)
Q Consensus       381 lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~  426 (538)
                      -..+.|||.|+.=+..-..+  .-+..+|+.++|..||+|+.|...
T Consensus       255 ~n~I~A~V~~~qtv~~G~~v--rlRLle~~~v~~~~ipkgt~l~g~  298 (410)
T TIGR03779       255 RNTIRACVHETQTVVDGSAV--KLRLLEPIQAGDLVIPKGTVLYGT  298 (410)
T ss_pred             CCceEEEEcCceEEecCCEE--EEEEcCceeeCCEEecCCCEEEEE
Confidence            45678999999988765433  234678999999999999987654


No 42 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=30.65  E-value=2.1e+02  Score=20.68  Aligned_cols=49  Identities=12%  Similarity=0.093  Sum_probs=41.7

Q ss_pred             CHHHHHHHHHHHHHhcccchhhHHHHHHHHHhcCchHHHHHHHHHHHHh
Q 009312          319 SMNQFKALLVDIITGGTDTTTTMVEWTMAELMQHPLVTKKVHEELAEVV  367 (538)
Q Consensus       319 ~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~  367 (538)
                      ..+.........+|-=+..++....-.+.+-++||+..+++.+.+..-+
T Consensus        30 ~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   30 SSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             cHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            3455666677888999999999999999999999999999999987654


No 43 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=30.29  E-value=23  Score=22.62  Aligned_cols=11  Identities=45%  Similarity=1.002  Sum_probs=9.0

Q ss_pred             eccCCCCCCCc
Q 009312          467 LPFGSGRRKCA  477 (538)
Q Consensus       467 ~~Fg~G~r~C~  477 (538)
                      -+||-|+|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            36999999884


No 44 
>COG0767 Ttg2B ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=29.57  E-value=57  Score=29.44  Aligned_cols=55  Identities=16%  Similarity=0.379  Sum_probs=42.4

Q ss_pred             HHHHHHHHHHHHHhcccchhhHHHHHHHHHhcCchHHHHHHHHHHHHhcCCCccccccCCCchhHHHHHhhhccCCCCCc
Q 009312          320 MNQFKALLVDIITGGTDTTTTMVEWTMAELMQHPLVTKKVHEELAEVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPAQP  399 (538)
Q Consensus       320 ~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~  399 (538)
                      -+|+.-.+..+++||.-.++.+..--.          -|++|||++.                       |+|-++|..-
T Consensus       102 ~RElgPvlTal~~AGr~gSa~tAeIG~----------MritEEIDAl-----------------------evmgidPi~~  148 (267)
T COG0767         102 LRELGPVLTALVVAGRVGSAITAEIGA----------MRITEEIDAL-----------------------EVMGIDPISR  148 (267)
T ss_pred             HHHHHHHHHHHHHHhhhHHHHHHHHhc----------chHHHHHHHH-----------------------HHhCCCchHH
Confidence            467888899999999877666654433          3899999984                       8888888887


Q ss_pred             Cccccccc
Q 009312          400 LLVPHRAS  407 (538)
Q Consensus       400 ~~~~R~~~  407 (538)
                      ...||...
T Consensus       149 LV~PRvlA  156 (267)
T COG0767         149 LVAPRVLA  156 (267)
T ss_pred             HhHHHHHH
Confidence            77888754


No 45 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=28.82  E-value=1.1e+02  Score=22.07  Aligned_cols=18  Identities=22%  Similarity=0.427  Sum_probs=15.7

Q ss_pred             CchHHHHHHHHHHHHhcC
Q 009312          352 HPLVTKKVHEELAEVVGM  369 (538)
Q Consensus       352 ~p~~~~~lr~Ei~~~~~~  369 (538)
                      .|++...+|+||-+++..
T Consensus        35 ~pd~l~~Lr~eIl~VI~K   52 (88)
T COG0851          35 QPDYLEQLRKEILEVISK   52 (88)
T ss_pred             CcchHHHHHHHHHHHHHH
Confidence            389999999999999864


No 46 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=26.79  E-value=1.4e+02  Score=23.50  Aligned_cols=42  Identities=14%  Similarity=0.373  Sum_probs=33.0

Q ss_pred             CChhHHHHHHHHhhCCeEEEeccCeeEEEecCHHHHHHHHHhCC
Q 009312           61 TDLHKTFNDLSGVYGPIFKLWFGNKLCVVVSSPSLVKQVVHDQD  104 (538)
Q Consensus        61 ~~~~~~~~~~~~kyG~v~~v~~~~~~~v~v~dp~~~~~i~~~~~  104 (538)
                      .+....+.+|.++||.+--.  .+...+...|++.++++...+.
T Consensus        74 ~~v~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~~~  115 (129)
T PF13625_consen   74 QNVEQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLADPE  115 (129)
T ss_pred             HHHHHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhChh
Confidence            45678899999999987432  2467788999999999987753


No 47 
>PF14459 Prok-E2_C:  Prokaryotic E2 family C
Probab=26.47  E-value=24  Score=26.21  Aligned_cols=18  Identities=28%  Similarity=0.497  Sum_probs=14.8

Q ss_pred             CCcceeccCCCCCCCccH
Q 009312          462 KNFQYLPFGSGRRKCAGI  479 (538)
Q Consensus       462 ~~~~~~~Fg~G~r~C~G~  479 (538)
                      ...+-+|||.|.-.|+|.
T Consensus       103 ~gss~~p~GaGaAaC~aA  120 (131)
T PF14459_consen  103 CGSSNNPFGAGAAACFAA  120 (131)
T ss_pred             cCcccCCcCccHHHHHHH
Confidence            345679999999999985


No 48 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=26.08  E-value=1.6e+02  Score=18.70  Aligned_cols=36  Identities=14%  Similarity=0.116  Sum_probs=25.6

Q ss_pred             HHHHHHhhCCeEEEecc----CeeEEEecCHHHHHHHHHh
Q 009312           67 FNDLSGVYGPIFKLWFG----NKLCVVVSSPSLVKQVVHD  102 (538)
Q Consensus        67 ~~~~~~kyG~v~~v~~~----~~~~v~v~dp~~~~~i~~~  102 (538)
                      +.+...+||.|-++.+.    +.-.|-..+++.++.....
T Consensus         1 L~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~~   40 (56)
T PF13893_consen    1 LYKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIEQ   40 (56)
T ss_dssp             HHHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHHH
T ss_pred             ChHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence            35677899999888764    3345667799998888763


No 49 
>PHA03049 IMV membrane protein; Provisional
Probab=24.16  E-value=1.8e+02  Score=19.62  Aligned_cols=17  Identities=29%  Similarity=0.632  Sum_probs=8.6

Q ss_pred             HHHHHHHHHHHHHHHHH
Q 009312           14 AIITCLVAVVAVVYFAW   30 (538)
Q Consensus        14 ~~~~~l~~~~~~~~~~~   30 (538)
                      +++.|+++++++++-.|
T Consensus         7 l~iICVaIi~lIvYgiY   23 (68)
T PHA03049          7 LVIICVVIIGLIVYGIY   23 (68)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            44555555555554444


No 50 
>PF05961 Chordopox_A13L:  Chordopoxvirus A13L protein;  InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=23.18  E-value=2e+02  Score=19.57  Aligned_cols=19  Identities=26%  Similarity=0.551  Sum_probs=10.9

Q ss_pred             HHHHHHHHHHHHHHHHHHh
Q 009312           13 TAIITCLVAVVAVVYFAWN   31 (538)
Q Consensus        13 ~~~~~~l~~~~~~~~~~~~   31 (538)
                      .+++.|+++++++++..|.
T Consensus         6 iLi~ICVaii~lIlY~iYn   24 (68)
T PF05961_consen    6 ILIIICVAIIGLILYGIYN   24 (68)
T ss_pred             HHHHHHHHHHHHHHHHHHh
Confidence            3555666666665555554


No 51 
>PF11138 DUF2911:  Protein of unknown function (DUF2911);  InterPro: IPR021314  This bacterial family of proteins has no known function. 
Probab=22.39  E-value=84  Score=25.46  Aligned_cols=40  Identities=20%  Similarity=0.464  Sum_probs=27.2

Q ss_pred             ccCcccccCeecCCCCEEEeehh-------hhhcCCCCCCCCCCCCCC
Q 009312          406 ASESSSIGGYTIPKDTTLMLNVW-------AIHRDPRLWDNPLEFRPE  446 (538)
Q Consensus       406 ~~~~~~l~g~~ip~G~~v~~~~~-------~~~~dp~~~~dp~~F~P~  446 (538)
                      ..+|+.++|..||+|+.-+..+.       .+|.+.+.|.. ..+||+
T Consensus        52 f~~dv~igGk~l~AG~Ysl~tiP~~~~WtvI~n~~~~~wG~-~~Y~~~   98 (145)
T PF11138_consen   52 FSKDVTIGGKKLKAGTYSLFTIPGEDEWTVIFNKDTDQWGA-YNYDPS   98 (145)
T ss_pred             ECCCeEECCEEcCCeeEEEEEecCCCeEEEEEECCCCccCc-cccCch
Confidence            35789999999999998776553       35556666643 344444


No 52 
>PF10717 ODV-E18:  Occlusion-derived virus envelope protein ODV-E18;  InterPro: IPR019655  Baculovirus occlusion-derived virus (ODV) derives its envelope from an intranuclear membrane source. Occlusion-derived viral envelope proteins that are detected in viral-induced intranuclear microvesicles, but not detected in the plasma membrane, cytoplasmic membranes, or the nuclear envelope. This entry represents ODV-E18 protein which is encoded by baculovirus late genes with transcription initiating from a TAAG motif. ODV-E18 exists as a dimer in the ODV envelope, which contains a hydrophobic domain that putatively acts as a target or retention signal for intranuclear microvesicles []. ; GO: 0019031 viral envelope
Probab=22.02  E-value=2.8e+02  Score=19.84  Aligned_cols=21  Identities=14%  Similarity=0.357  Sum_probs=10.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHhh
Q 009312           12 ETAIITCLVAVVAVVYFAWNV   32 (538)
Q Consensus        12 ~~~~~~~l~~~~~~~~~~~~~   32 (538)
                      +..+.++|++++++++++.++
T Consensus        24 pn~lMtILivLVIIiLlImlf   44 (85)
T PF10717_consen   24 PNTLMTILIVLVIIILLIMLF   44 (85)
T ss_pred             hhHHHHHHHHHHHHHHHHHHH
Confidence            334555555555554444443


No 53 
>COG4471 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.90  E-value=2.2e+02  Score=20.65  Aligned_cols=34  Identities=18%  Similarity=0.176  Sum_probs=27.7

Q ss_pred             HHHHhhCCeEEEeccCeeEEEecCHHHHHHHHHh
Q 009312           69 DLSGVYGPIFKLWFGNKLCVVVSSPSLVKQVVHD  102 (538)
Q Consensus        69 ~~~~kyG~v~~v~~~~~~~v~v~dp~~~~~i~~~  102 (538)
                      +.-++||+|.-..--.+-.++-+|-+.+.+++.+
T Consensus        20 RqLrkfG~v~Y~Skk~kY~vlYvn~~~ve~~~~k   53 (90)
T COG4471          20 RQLRKFGDVHYVSKKSKYVVLYVNEQDVEQIVEK   53 (90)
T ss_pred             HHHHhcCCEEEEecceeEEEEEECHHHHHHHHHH
Confidence            3457899999887667777888999999999865


No 54 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=21.89  E-value=49  Score=28.56  Aligned_cols=20  Identities=40%  Similarity=0.906  Sum_probs=17.6

Q ss_pred             hhhhcCCCCCCCCCCCCCCc
Q 009312          428 WAIHRDPRLWDNPLEFRPER  447 (538)
Q Consensus       428 ~~~~~dp~~~~dp~~F~P~R  447 (538)
                      +.-|.|+.+|.|...|+|-|
T Consensus       192 ~~~n~~~~FY~d~~~FRp~R  211 (212)
T PF11227_consen  192 WPDNEDPAFYDDTDVFRPGR  211 (212)
T ss_pred             CCCCCCcccccCccccCCCC
Confidence            34589999999999999988


No 55 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=21.11  E-value=1.3e+02  Score=17.82  Aligned_cols=12  Identities=17%  Similarity=0.556  Sum_probs=9.3

Q ss_pred             hcCchHHHHHHH
Q 009312          350 MQHPLVTKKVHE  361 (538)
Q Consensus       350 ~~~p~~~~~lr~  361 (538)
                      .+|||+++.+++
T Consensus        24 ~~HPei~~~i~~   35 (38)
T PF14483_consen   24 ERHPEIQQEIRS   35 (38)
T ss_dssp             HHSTHHHHHHHT
T ss_pred             HhChhHHHHHHh
Confidence            489999887764


Done!