Query 009313
Match_columns 537
No_of_seqs 337 out of 2027
Neff 6.7
Searched_HMMs 46136
Date Thu Mar 28 23:02:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009313.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009313hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02854 3-ketoacyl-CoA syntha 100.0 1E-117 3E-122 956.8 46.7 495 29-537 17-518 (521)
2 PLN02192 3-ketoacyl-CoA syntha 100.0 3E-118 7E-123 959.9 39.3 495 29-537 10-505 (511)
3 PLN02377 3-ketoacyl-CoA syntha 100.0 4E-115 1E-119 937.4 44.5 495 29-537 6-500 (502)
4 PLN02932 3-ketoacyl-CoA syntha 100.0 5E-107 1E-111 870.7 40.4 470 54-537 1-476 (478)
5 PLN00415 3-ketoacyl-CoA syntha 100.0 2E-98 4E-103 795.6 38.8 430 96-537 33-465 (466)
6 PF08392 FAE1_CUT1_RppA: FAE1/ 100.0 1.7E-75 3.6E-80 585.0 22.4 290 115-405 1-290 (290)
7 COG0332 FabH 3-oxoacyl-[acyl-c 100.0 8.6E-56 1.9E-60 453.4 22.1 316 121-515 2-323 (323)
8 PLN03172 chalcone synthase fam 100.0 1.1E-50 2.4E-55 430.1 30.6 350 121-516 15-388 (393)
9 cd00831 CHS_like Chalcone and 100.0 7E-51 1.5E-55 427.9 28.8 345 123-512 2-361 (361)
10 PLN03169 chalcone synthase fam 100.0 2.4E-49 5.3E-54 420.3 30.3 353 117-515 16-389 (391)
11 PLN03173 chalcone synthase; Pr 100.0 2.1E-49 4.6E-54 420.0 29.6 351 121-517 15-389 (391)
12 PLN03168 chalcone synthase; Pr 100.0 7.1E-49 1.5E-53 416.2 31.1 350 121-517 14-388 (389)
13 PLN03171 chalcone synthase-lik 100.0 3.7E-48 8.1E-53 412.1 29.9 354 120-516 20-396 (399)
14 PLN03170 chalcone synthase; Pr 100.0 2.7E-48 6E-53 413.0 28.7 351 121-516 19-392 (401)
15 PRK05963 3-oxoacyl-(acyl carri 100.0 8.4E-47 1.8E-51 391.3 30.1 323 121-514 2-326 (326)
16 PLN02326 3-oxoacyl-[acyl-carri 100.0 1.6E-46 3.4E-51 397.7 28.0 332 121-514 46-379 (379)
17 PRK12880 3-oxoacyl-(acyl carri 100.0 2.5E-46 5.4E-51 392.5 28.7 334 119-516 4-340 (353)
18 COG3424 BcsA Predicted naringe 100.0 1.1E-46 2.5E-51 372.6 24.4 347 123-516 2-354 (356)
19 CHL00203 fabH 3-oxoacyl-acyl-c 100.0 2.2E-45 4.8E-50 381.2 27.7 323 122-514 2-325 (326)
20 PRK07204 3-oxoacyl-(acyl carri 100.0 9.3E-45 2E-49 376.5 29.8 325 121-514 3-329 (329)
21 PRK12879 3-oxoacyl-(acyl carri 100.0 2.2E-44 4.7E-49 372.5 31.9 318 121-514 3-324 (325)
22 PRK09258 3-oxoacyl-(acyl carri 100.0 5.5E-44 1.2E-48 371.9 28.9 320 120-514 3-338 (338)
23 PRK06840 hypothetical protein; 100.0 1.2E-43 2.5E-48 369.9 31.1 330 120-515 2-336 (339)
24 cd00830 KAS_III Ketoacyl-acyl 100.0 2.4E-43 5.2E-48 363.2 28.5 319 122-512 1-320 (320)
25 TIGR00747 fabH 3-oxoacyl-(acyl 100.0 2.4E-43 5.3E-48 363.8 27.7 316 122-514 2-318 (318)
26 PRK09352 3-oxoacyl-(acyl carri 100.0 6.3E-42 1.4E-46 353.2 29.0 316 121-514 2-318 (319)
27 PRK06816 3-oxoacyl-(acyl carri 100.0 9E-42 2E-46 361.2 30.0 347 122-515 2-378 (378)
28 PRK04262 hypothetical protein; 100.0 2.4E-41 5.3E-46 354.0 27.7 312 121-519 1-313 (347)
29 PRK07515 3-oxoacyl-(acyl carri 100.0 3.6E-40 7.9E-45 348.2 29.5 347 122-514 2-371 (372)
30 TIGR00748 HMG_CoA_syn_Arc hydr 100.0 1.6E-40 3.6E-45 347.6 25.1 316 123-527 2-318 (345)
31 cd00827 init_cond_enzymes "ini 100.0 2.6E-38 5.7E-43 326.3 25.7 319 122-512 1-324 (324)
32 TIGR01835 HMG-CoA-S_prok 3-hyd 100.0 1.8E-34 3.9E-39 305.6 27.4 307 123-516 1-319 (379)
33 PLN02577 hydroxymethylglutaryl 100.0 2.8E-32 6.2E-37 292.6 27.6 316 119-516 1-372 (459)
34 PF00195 Chal_sti_synt_N: Chal 100.0 1.4E-30 3E-35 254.9 14.2 204 117-322 9-226 (226)
35 COG3425 PksG 3-hydroxy-3-methy 100.0 2.1E-29 4.5E-34 260.1 23.3 312 122-519 2-315 (377)
36 TIGR01833 HMG-CoA-S_euk 3-hydr 100.0 3.5E-29 7.6E-34 268.5 24.2 314 122-517 1-376 (454)
37 cd00327 cond_enzymes Condensin 100.0 5.3E-28 1.1E-32 240.5 17.4 238 198-512 7-254 (254)
38 cd00825 decarbox_cond_enzymes 99.9 6.3E-26 1.4E-30 234.5 15.5 252 198-512 11-332 (332)
39 PF08541 ACP_syn_III_C: 3-Oxoa 99.8 4.5E-20 9.8E-25 156.3 7.2 87 419-514 4-90 (90)
40 PF02797 Chal_sti_synt_C: Chal 99.8 1.3E-19 2.8E-24 168.1 10.6 128 350-516 17-151 (151)
41 PRK06147 3-oxoacyl-(acyl carri 99.7 3E-16 6.5E-21 164.8 17.9 257 197-516 64-344 (348)
42 PF01154 HMG_CoA_synt_N: Hydro 99.7 8.8E-17 1.9E-21 150.9 12.2 167 119-321 1-172 (174)
43 TIGR02845 spore_V_AD stage V s 99.6 2.1E-14 4.5E-19 146.8 20.1 115 199-323 51-173 (327)
44 cd00834 KAS_I_II Beta-ketoacyl 99.6 4E-14 8.7E-19 150.8 22.7 286 121-484 1-351 (406)
45 KOG1393 Hydroxymethylglutaryl- 99.6 4.8E-14 1E-18 144.1 20.8 320 119-519 8-381 (462)
46 cd00751 thiolase Thiolase are 99.6 2E-13 4.4E-18 145.3 20.9 94 198-292 22-116 (386)
47 smart00825 PKS_KS Beta-ketoacy 99.5 5.5E-13 1.2E-17 143.2 22.9 123 196-323 85-247 (424)
48 PRK05656 acetyl-CoA acetyltran 99.5 1.7E-12 3.6E-17 138.7 21.7 94 198-292 26-120 (393)
49 PRK08304 stage V sporulation p 99.5 1.6E-12 3.6E-17 133.3 20.1 115 200-323 58-179 (337)
50 PRK09051 beta-ketothiolase; Pr 99.5 2.7E-12 5.9E-17 137.0 22.3 93 199-292 28-122 (394)
51 TIGR01930 AcCoA-C-Actrans acet 99.5 1.6E-12 3.4E-17 138.5 20.0 94 198-292 21-115 (386)
52 PRK06064 acetyl-CoA acetyltran 99.5 4.6E-12 1E-16 135.1 21.7 92 198-291 22-116 (389)
53 TIGR03150 fabF beta-ketoacyl-a 99.5 8.5E-12 1.8E-16 133.2 23.0 186 121-323 1-243 (407)
54 cd00828 elong_cond_enzymes "el 99.5 8E-12 1.7E-16 133.6 22.5 223 196-484 70-350 (407)
55 cd00829 SCP-x_thiolase Thiolas 99.4 1E-11 2.2E-16 131.4 22.4 94 197-292 15-109 (375)
56 PRK06501 3-oxoacyl-(acyl carri 99.4 2.4E-11 5.2E-16 131.1 25.5 308 121-514 11-422 (425)
57 PRK09052 acetyl-CoA acetyltran 99.4 7.7E-12 1.7E-16 133.8 21.3 94 198-292 31-127 (399)
58 PRK08313 acetyl-CoA acetyltran 99.4 1.4E-11 3.1E-16 131.2 23.1 91 199-291 25-117 (386)
59 cd00833 PKS polyketide synthas 99.4 3.5E-11 7.5E-16 128.8 24.4 123 196-323 85-247 (421)
60 PRK07314 3-oxoacyl-(acyl carri 99.4 3.8E-11 8.3E-16 128.7 24.4 317 121-514 2-409 (411)
61 PRK07108 acetyl-CoA acetyltran 99.4 1.2E-11 2.7E-16 131.9 20.4 94 198-292 27-122 (392)
62 PRK06205 acetyl-CoA acetyltran 99.4 2E-11 4.2E-16 131.0 21.1 94 198-292 26-120 (404)
63 PRK12578 acetyl-CoA acetyltran 99.4 3.9E-11 8.5E-16 127.8 22.7 91 199-291 22-113 (385)
64 PRK08242 acetyl-CoA acetyltran 99.4 3.1E-11 6.8E-16 129.1 21.9 95 197-292 27-123 (402)
65 PRK06059 lipid-transfer protei 99.4 3.8E-11 8.1E-16 128.6 22.0 91 199-291 24-116 (399)
66 PRK06333 3-oxoacyl-(acyl carri 99.4 5E-11 1.1E-15 128.4 22.3 319 121-514 4-421 (424)
67 PRK08235 acetyl-CoA acetyltran 99.4 2.8E-11 6E-16 129.3 19.7 94 198-292 26-120 (393)
68 PF08545 ACP_syn_III: 3-Oxoacy 99.4 1.1E-12 2.3E-17 109.0 6.9 80 253-344 1-80 (80)
69 PRK06025 acetyl-CoA acetyltran 99.4 7E-11 1.5E-15 126.4 22.1 95 197-292 28-124 (417)
70 PRK06954 acetyl-CoA acetyltran 99.4 5.2E-11 1.1E-15 127.4 20.9 94 198-292 31-125 (397)
71 PRK05790 putative acyltransfer 99.4 6.3E-11 1.4E-15 126.6 21.4 93 198-291 26-119 (393)
72 PRK07661 acetyl-CoA acetyltran 99.3 1E-10 2.2E-15 125.0 21.6 93 199-292 28-122 (391)
73 PRK06445 acetyl-CoA acetyltran 99.3 9.8E-11 2.1E-15 125.2 21.5 90 199-291 33-126 (394)
74 PRK07103 polyketide beta-ketoa 99.3 1.3E-10 2.8E-15 124.8 21.6 250 197-513 79-409 (410)
75 PRK08722 3-oxoacyl-(acyl carri 99.3 4.9E-10 1.1E-14 120.6 24.1 311 117-513 1-412 (414)
76 PLN02287 3-ketoacyl-CoA thiola 99.3 3E-10 6.6E-15 123.2 21.2 93 198-291 71-165 (452)
77 PRK06690 acetyl-CoA acetyltran 99.3 4.6E-10 1E-14 118.6 22.0 243 198-515 25-360 (361)
78 PRK06158 thiolase; Provisional 99.3 5.3E-10 1.2E-14 119.2 22.0 86 199-289 29-115 (384)
79 PRK05952 3-oxoacyl-(acyl carri 99.3 7.1E-10 1.5E-14 118.1 22.5 302 121-513 2-380 (381)
80 PRK08256 lipid-transfer protei 99.2 5.8E-10 1.3E-14 119.1 21.2 90 198-291 22-111 (391)
81 PRK06065 acetyl-CoA acetyltran 99.2 1.1E-09 2.4E-14 116.9 23.2 90 199-290 30-121 (392)
82 PLN02644 acetyl-CoA C-acetyltr 99.2 7.5E-10 1.6E-14 118.4 21.3 93 198-291 25-118 (394)
83 PRK06633 acetyl-CoA acetyltran 99.2 4.1E-10 9E-15 120.2 19.0 95 197-292 26-121 (392)
84 PRK09116 3-oxoacyl-(acyl carri 99.2 6.6E-10 1.4E-14 119.3 20.5 316 121-513 2-405 (405)
85 PRK07851 acetyl-CoA acetyltran 99.2 7.3E-10 1.6E-14 118.9 20.4 92 199-292 28-122 (406)
86 cd00826 nondecarbox_cond_enzym 99.2 5.5E-10 1.2E-14 119.4 19.4 94 197-292 22-117 (393)
87 PRK08439 3-oxoacyl-(acyl carri 99.2 1.8E-09 3.9E-14 115.9 23.4 176 121-323 2-244 (406)
88 PRK07850 acetyl-CoA acetyltran 99.2 1.2E-09 2.6E-14 116.6 21.8 94 198-292 26-121 (387)
89 PRK07516 acetyl-CoA acetyltran 99.2 1.3E-09 2.8E-14 116.4 21.7 92 198-291 22-116 (389)
90 PRK13359 beta-ketoadipyl CoA t 99.2 1.4E-09 3.1E-14 116.4 21.0 95 197-292 25-122 (400)
91 PRK08963 fadI 3-ketoacyl-CoA t 99.2 1.4E-09 3.1E-14 117.5 21.2 94 198-292 29-123 (428)
92 PLN02787 3-oxoacyl-[acyl-carri 99.2 3.5E-09 7.5E-14 117.2 24.4 317 121-514 129-538 (540)
93 PRK06504 acetyl-CoA acetyltran 99.2 2.5E-09 5.4E-14 114.2 22.2 94 198-292 26-121 (390)
94 PLN02836 3-oxoacyl-[acyl-carri 99.2 3E-09 6.6E-14 115.2 22.9 122 197-323 92-267 (437)
95 cd00832 CLF Chain-length facto 99.2 4.5E-09 9.8E-14 112.6 24.0 280 121-484 1-344 (399)
96 PRK06289 acetyl-CoA acetyltran 99.2 2.5E-09 5.3E-14 114.8 21.6 89 199-291 27-121 (403)
97 PRK09185 3-oxoacyl-(acyl carri 99.2 2.1E-08 4.6E-13 107.2 27.9 206 234-514 137-390 (392)
98 PRK09050 beta-ketoadipyl CoA t 99.2 2.2E-09 4.8E-14 115.0 20.2 94 198-292 26-122 (401)
99 PRK07910 3-oxoacyl-(acyl carri 99.1 1.2E-08 2.6E-13 110.0 25.1 317 121-513 12-416 (418)
100 PRK08131 acetyl-CoA acetyltran 99.1 4.1E-09 8.9E-14 113.0 21.3 94 198-292 26-121 (401)
101 TIGR02430 pcaF beta-ketoadipyl 99.1 3.1E-09 6.7E-14 113.8 20.2 94 198-292 25-121 (400)
102 PRK12404 stage V sporulation p 99.1 3.5E-09 7.6E-14 108.4 18.9 115 200-323 56-177 (334)
103 PRK07801 acetyl-CoA acetyltran 99.1 4E-09 8.7E-14 112.4 20.2 93 198-291 26-120 (382)
104 PRK08947 fadA 3-ketoacyl-CoA t 99.1 8E-09 1.7E-13 110.3 21.8 94 198-292 27-123 (387)
105 TIGR02446 FadI fatty oxidation 99.1 5E-09 1.1E-13 113.2 20.1 94 198-292 31-125 (430)
106 PRK06366 acetyl-CoA acetyltran 99.1 7.2E-09 1.6E-13 110.7 20.5 93 198-291 26-119 (388)
107 PTZ00050 3-oxoacyl-acyl carrie 99.1 1.1E-08 2.5E-13 110.3 20.5 256 196-514 75-420 (421)
108 TIGR02445 fadA fatty oxidation 99.0 2.1E-08 4.5E-13 107.1 21.6 95 197-292 24-121 (385)
109 PRK06157 acetyl-CoA acetyltran 99.0 2.5E-08 5.4E-13 106.9 22.1 92 198-291 27-119 (398)
110 PRK06365 acetyl-CoA acetyltran 99.0 2E-08 4.4E-13 108.6 21.4 92 198-291 37-130 (430)
111 PRK07967 3-oxoacyl-(acyl carri 99.0 3.3E-08 7.1E-13 106.2 22.6 188 121-323 2-244 (406)
112 PRK06519 3-oxoacyl-(acyl carri 99.0 8.8E-08 1.9E-12 102.6 25.0 276 120-490 5-359 (398)
113 PRK08257 acetyl-CoA acetyltran 99.0 4.9E-08 1.1E-12 107.4 23.3 91 198-290 27-119 (498)
114 PRK14691 3-oxoacyl-(acyl carri 99.0 3.1E-08 6.7E-13 104.1 18.9 252 198-514 4-339 (342)
115 PRK08142 acetyl-CoA acetyltran 98.9 1.6E-07 3.5E-12 100.3 21.6 87 199-290 26-112 (388)
116 PRK08170 acetyl-CoA acetyltran 98.9 6.7E-09 1.5E-13 112.2 11.0 94 198-292 27-121 (426)
117 TIGR02813 omega_3_PfaA polyket 98.9 2E-07 4.3E-12 118.2 24.2 326 120-516 6-463 (2582)
118 PF00108 Thiolase_N: Thiolase, 98.9 1.1E-08 2.4E-13 103.7 10.7 96 197-293 25-121 (264)
119 PF00109 ketoacyl-synt: Beta-k 98.8 3E-08 6.5E-13 98.9 11.4 121 196-321 85-251 (254)
120 PRK06066 acetyl-CoA acetyltran 98.7 1.2E-06 2.6E-11 93.5 21.4 87 199-290 26-115 (385)
121 PRK07855 lipid-transfer protei 98.6 3.5E-06 7.6E-11 90.1 22.0 83 200-287 26-108 (386)
122 COG0304 FabB 3-oxoacyl-(acyl-c 98.6 3.2E-06 6.9E-11 90.8 18.7 123 194-323 67-244 (412)
123 PTZ00455 3-ketoacyl-CoA thiola 98.5 4.3E-07 9.3E-12 98.5 11.2 94 198-292 48-152 (438)
124 PRK07937 lipid-transfer protei 98.5 1.4E-05 3.1E-10 84.4 20.2 88 199-291 25-114 (352)
125 PRK09268 acetyl-CoA acetyltran 98.4 9E-07 2E-11 95.8 10.8 94 198-292 31-125 (427)
126 KOG1390 Acetyl-CoA acetyltrans 98.4 9.1E-06 2E-10 82.6 14.7 94 198-292 30-124 (396)
127 COG3321 Polyketide synthase mo 98.3 5.8E-05 1.3E-09 90.1 20.9 294 121-483 4-360 (1061)
128 PF07451 SpoVAD: Stage V sporu 98.2 6.2E-05 1.3E-09 76.6 16.1 115 200-323 53-174 (329)
129 KOG1389 3-oxoacyl CoA thiolase 98.2 2.8E-05 6E-10 78.9 13.3 93 200-293 63-156 (435)
130 KOG1394 3-oxoacyl-(acyl-carrie 97.9 6.8E-05 1.5E-09 77.5 11.1 121 196-323 92-269 (440)
131 COG0183 PaaJ Acetyl-CoA acetyl 97.7 0.00011 2.4E-09 78.8 9.4 93 200-293 29-125 (392)
132 KOG1406 Peroxisomal 3-ketoacyl 97.0 0.001 2.2E-08 66.4 5.2 86 202-292 33-119 (408)
133 PF08540 HMG_CoA_synt_C: Hydro 96.8 0.0011 2.4E-08 67.9 3.9 60 458-517 143-204 (282)
134 KOG1391 Acetyl-CoA acetyltrans 96.2 0.0075 1.6E-07 60.2 5.6 91 199-292 29-123 (396)
135 KOG1392 Acetyl-CoA acetyltrans 94.6 0.029 6.4E-07 56.8 3.4 93 199-292 67-160 (465)
136 PF08541 ACP_syn_III_C: 3-Oxoa 93.7 0.068 1.5E-06 44.8 3.5 76 210-289 1-79 (90)
137 KOG1202 Animal-type fatty acid 93.4 0.12 2.7E-06 61.0 5.9 123 197-324 86-248 (2376)
138 PRK06025 acetyl-CoA acetyltran 93.3 0.29 6.2E-06 53.1 8.2 91 203-320 318-416 (417)
139 PF13723 Ketoacyl-synt_2: Beta 92.8 2 4.3E-05 42.6 12.7 115 197-323 33-172 (218)
140 TIGR00748 HMG_CoA_syn_Arc hydr 91.7 0.63 1.4E-05 49.1 8.3 83 198-286 206-293 (345)
141 PRK06816 3-oxoacyl-(acyl carri 91.7 0.7 1.5E-05 49.3 8.7 88 198-289 270-365 (378)
142 PRK05963 3-oxoacyl-(acyl carri 90.1 0.6 1.3E-05 48.5 6.2 85 196-287 223-313 (326)
143 PRK09258 3-oxoacyl-(acyl carri 89.9 1 2.2E-05 46.9 7.9 87 196-289 235-327 (338)
144 cd00825 decarbox_cond_enzymes 89.8 1.3 2.7E-05 45.7 8.3 77 201-277 206-286 (332)
145 TIGR00747 fabH 3-oxoacyl-(acyl 89.6 0.83 1.8E-05 47.1 6.8 84 197-287 216-305 (318)
146 PRK07204 3-oxoacyl-(acyl carri 89.1 1.3 2.8E-05 46.0 7.8 82 198-286 228-315 (329)
147 PRK12879 3-oxoacyl-(acyl carri 88.8 1.4 3E-05 45.5 7.8 83 198-287 223-311 (325)
148 PRK13359 beta-ketoadipyl CoA t 88.0 2 4.4E-05 46.4 8.5 93 203-320 299-399 (400)
149 PRK08170 acetyl-CoA acetyltran 87.9 2.6 5.7E-05 45.8 9.5 91 402-513 313-424 (426)
150 PF02803 Thiolase_C: Thiolase, 87.8 0.8 1.7E-05 41.3 4.5 94 402-513 28-122 (123)
151 PRK09050 beta-ketoadipyl CoA t 87.2 2.4 5.2E-05 45.8 8.6 69 203-275 300-376 (401)
152 cd00327 cond_enzymes Condensin 87.1 2.6 5.6E-05 41.5 8.2 77 201-277 146-226 (254)
153 cd00830 KAS_III Ketoacyl-acyl 86.9 1.7 3.6E-05 44.7 7.0 84 197-287 220-309 (320)
154 PTZ00455 3-ketoacyl-CoA thiola 86.8 5.3 0.00011 43.7 11.0 68 401-485 314-399 (438)
155 PRK04262 hypothetical protein; 86.3 1.8 3.9E-05 45.5 7.0 68 200-271 209-281 (347)
156 CHL00203 fabH 3-oxoacyl-acyl-c 85.8 2.2 4.8E-05 44.3 7.3 81 200-287 226-312 (326)
157 PRK09352 3-oxoacyl-(acyl carri 85.7 2.4 5.3E-05 43.6 7.4 84 197-287 216-305 (319)
158 TIGR02430 pcaF beta-ketoadipyl 85.6 2.5 5.5E-05 45.6 7.8 69 203-275 299-375 (400)
159 PLN02326 3-oxoacyl-[acyl-carri 85.5 3.4 7.3E-05 44.1 8.6 82 198-286 278-365 (379)
160 PRK08242 acetyl-CoA acetyltran 85.1 3.9 8.5E-05 44.2 8.9 91 203-320 303-401 (402)
161 PRK06366 acetyl-CoA acetyltran 84.8 3.6 7.8E-05 44.2 8.4 74 203-283 288-369 (388)
162 PRK06840 hypothetical protein; 84.6 3.7 8.1E-05 42.8 8.3 80 201-287 238-322 (339)
163 PRK07850 acetyl-CoA acetyltran 84.1 5.5 0.00012 42.8 9.4 92 202-320 287-386 (387)
164 PRK09052 acetyl-CoA acetyltran 84.0 3.9 8.6E-05 44.1 8.3 92 202-320 299-398 (399)
165 PRK06147 3-oxoacyl-(acyl carri 83.8 2.4 5.2E-05 44.8 6.5 87 202-288 236-330 (348)
166 PRK09051 beta-ketothiolase; Pr 83.3 5.1 0.00011 43.2 8.8 68 202-275 294-369 (394)
167 COG0332 FabH 3-oxoacyl-[acyl-c 82.3 1.9 4.1E-05 45.3 4.9 53 195-251 218-270 (323)
168 PRK07515 3-oxoacyl-(acyl carri 80.9 4.4 9.5E-05 43.0 7.2 86 196-287 267-358 (372)
169 PF02803 Thiolase_C: Thiolase, 80.8 5 0.00011 36.2 6.4 75 202-283 24-106 (123)
170 PRK06690 acetyl-CoA acetyltran 80.4 8.1 0.00018 41.2 8.9 74 202-282 260-341 (361)
171 PRK06205 acetyl-CoA acetyltran 80.1 6.5 0.00014 42.4 8.3 94 202-320 300-402 (404)
172 PLN02287 3-ketoacyl-CoA thiola 80.0 7.3 0.00016 42.8 8.7 96 202-323 333-437 (452)
173 PRK07661 acetyl-CoA acetyltran 79.9 5.2 0.00011 43.1 7.4 92 202-320 291-390 (391)
174 PRK06445 acetyl-CoA acetyltran 78.7 5.9 0.00013 42.6 7.3 67 202-274 294-368 (394)
175 PRK09268 acetyl-CoA acetyltran 77.6 16 0.00035 39.8 10.4 94 402-513 315-426 (427)
176 PRK07851 acetyl-CoA acetyltran 76.3 5.9 0.00013 42.8 6.6 92 202-320 305-404 (406)
177 PRK08235 acetyl-CoA acetyltran 76.2 9.7 0.00021 41.0 8.2 67 203-275 294-368 (393)
178 PRK06954 acetyl-CoA acetyltran 75.8 4 8.7E-05 44.0 5.1 91 203-320 298-396 (397)
179 COG1214 Inactive homolog of me 75.4 9.6 0.00021 37.8 7.2 56 202-257 41-97 (220)
180 PRK08257 acetyl-CoA acetyltran 75.2 8.3 0.00018 42.9 7.5 79 203-286 295-382 (498)
181 cd00751 thiolase Thiolase are 75.0 11 0.00024 40.3 8.2 41 203-247 288-328 (386)
182 PRK05656 acetyl-CoA acetyltran 73.0 15 0.00032 39.6 8.5 92 202-320 293-392 (393)
183 cd00831 CHS_like Chalcone and 72.3 7.8 0.00017 40.9 6.2 87 197-287 256-350 (361)
184 TIGR01930 AcCoA-C-Actrans acet 71.1 10 0.00022 40.7 6.7 49 203-257 289-337 (386)
185 PLN03169 chalcone synthase fam 70.9 12 0.00026 40.3 7.2 87 198-286 279-374 (391)
186 PRK06059 lipid-transfer protei 70.2 21 0.00047 38.3 9.0 24 203-226 276-299 (399)
187 PF01135 PCMT: Protein-L-isoas 69.2 7.3 0.00016 38.3 4.8 42 469-510 49-90 (209)
188 cd00829 SCP-x_thiolase Thiolas 69.1 16 0.00035 38.6 7.7 43 202-248 253-295 (375)
189 COG3425 PksG 3-hydroxy-3-methy 68.8 20 0.00043 38.4 8.1 95 198-320 207-308 (377)
190 COG0533 QRI7 Metal-dependent p 68.2 14 0.00031 38.9 6.8 90 194-289 47-137 (342)
191 PRK07108 acetyl-CoA acetyltran 66.5 13 0.00028 40.1 6.4 68 202-275 292-367 (392)
192 PF02801 Ketoacyl-synt_C: Beta 66.5 2.1 4.5E-05 37.9 0.2 75 203-277 28-110 (119)
193 TIGR00329 gcp_kae1 metallohydr 66.4 15 0.00033 38.0 6.7 34 201-234 51-84 (305)
194 cd00827 init_cond_enzymes "ini 66.2 18 0.0004 37.0 7.3 87 195-288 218-314 (324)
195 PRK06504 acetyl-CoA acetyltran 65.1 14 0.00031 39.7 6.4 67 203-275 291-365 (390)
196 PRK08947 fadA 3-ketoacyl-CoA t 64.4 12 0.00027 40.1 5.7 69 203-275 285-362 (387)
197 PRK09604 UGMP family protein; 64.4 17 0.00036 38.3 6.6 47 200-246 53-104 (332)
198 PF00195 Chal_sti_synt_N: Chal 64.3 25 0.00054 35.1 7.4 72 419-502 115-190 (226)
199 PRK12880 3-oxoacyl-(acyl carri 63.7 17 0.00038 38.4 6.6 68 197-268 239-310 (353)
200 PRK07801 acetyl-CoA acetyltran 62.3 20 0.00044 38.3 6.9 67 203-275 283-357 (382)
201 PF00814 Peptidase_M22: Glycop 61.3 11 0.00023 38.5 4.3 63 194-257 26-89 (268)
202 TIGR02445 fadA fatty oxidation 60.8 33 0.00071 36.8 8.2 69 202-275 282-359 (385)
203 PRK06519 3-oxoacyl-(acyl carri 60.7 27 0.00059 37.7 7.5 75 202-277 282-357 (398)
204 TIGR03725 bact_YeaZ universal 60.0 16 0.00034 35.5 5.1 58 200-257 35-93 (202)
205 cd00834 KAS_I_II Beta-ketoacyl 59.9 16 0.00034 38.8 5.6 76 202-277 277-358 (406)
206 TIGR01835 HMG-CoA-S_prok 3-hyd 59.5 19 0.00042 38.4 6.1 31 197-227 202-232 (379)
207 PRK06633 acetyl-CoA acetyltran 59.5 24 0.00052 38.1 6.8 68 202-277 292-369 (392)
208 PRK08963 fadI 3-ketoacyl-CoA t 59.0 46 0.00099 36.3 9.0 25 202-226 311-335 (428)
209 PRK07314 3-oxoacyl-(acyl carri 58.6 17 0.00037 38.9 5.6 76 202-277 278-359 (411)
210 KOG2708 Predicted metalloprote 58.1 23 0.0005 35.5 5.8 83 201-289 52-135 (336)
211 PRK09185 3-oxoacyl-(acyl carri 58.0 31 0.00068 36.9 7.5 75 203-277 263-340 (392)
212 PRK14878 UGMP family protein; 57.3 18 0.00038 38.0 5.3 52 194-246 41-97 (323)
213 PRK05790 putative acyltransfer 56.9 29 0.00063 37.2 7.0 76 202-284 293-376 (393)
214 TIGR03723 bact_gcp putative gl 56.9 31 0.00068 35.9 7.0 54 200-257 51-109 (314)
215 cd00828 elong_cond_enzymes "el 56.8 20 0.00043 38.3 5.7 77 201-277 275-357 (407)
216 TIGR03150 fabF beta-ketoacyl-a 55.4 25 0.00053 37.5 6.1 45 202-246 277-322 (407)
217 PRK06064 acetyl-CoA acetyltran 54.8 37 0.00081 36.3 7.4 39 203-246 261-300 (389)
218 cd00826 nondecarbox_cond_enzym 53.5 36 0.00078 36.6 7.0 70 202-275 271-364 (393)
219 PTZ00050 3-oxoacyl-acyl carrie 53.2 40 0.00086 36.5 7.3 76 202-277 285-368 (421)
220 PLN02644 acetyl-CoA C-acetyltr 53.1 50 0.0011 35.5 8.0 67 203-275 294-368 (394)
221 cd00832 CLF Chain-length facto 52.3 28 0.00061 37.4 6.0 75 202-277 272-351 (399)
222 PRK08131 acetyl-CoA acetyltran 51.8 32 0.00069 37.2 6.3 70 202-276 298-376 (401)
223 PLN03168 chalcone synthase; Pr 51.6 43 0.00093 36.1 7.2 70 419-500 116-189 (389)
224 PRK07516 acetyl-CoA acetyltran 51.6 31 0.00066 37.0 6.1 69 202-275 262-355 (389)
225 PTZ00340 O-sialoglycoprotein e 50.8 44 0.00095 35.5 6.9 61 194-256 46-108 (345)
226 PRK14691 3-oxoacyl-(acyl carri 50.7 40 0.00087 35.6 6.7 45 202-246 208-253 (342)
227 PLN02787 3-oxoacyl-[acyl-carri 50.5 37 0.0008 38.3 6.7 76 202-277 407-487 (540)
228 PRK08256 lipid-transfer protei 50.0 45 0.00098 35.7 7.1 41 203-247 267-307 (391)
229 PRK05952 3-oxoacyl-(acyl carri 49.4 31 0.00067 37.0 5.6 76 202-277 256-334 (381)
230 TIGR03722 arch_KAE1 universal 49.3 24 0.00052 36.9 4.7 37 194-231 42-78 (322)
231 PLN03173 chalcone synthase; Pr 49.1 49 0.0011 35.7 7.2 70 419-500 117-190 (391)
232 PRK06501 3-oxoacyl-(acyl carri 48.4 42 0.00092 36.4 6.6 76 202-277 291-372 (425)
233 PLN03172 chalcone synthase fam 47.5 52 0.0011 35.5 7.0 70 419-500 117-190 (393)
234 smart00825 PKS_KS Beta-ketoacy 46.5 60 0.0013 34.8 7.4 45 202-246 281-326 (424)
235 PRK12578 acetyl-CoA acetyltran 46.4 47 0.001 35.5 6.5 41 202-247 259-300 (385)
236 COG4126 Hydantoin racemase [Am 46.2 84 0.0018 31.3 7.5 93 163-277 126-218 (230)
237 PRK09605 bifunctional UGMP fam 46.2 46 0.00099 37.2 6.6 37 194-231 45-81 (535)
238 PRK06158 thiolase; Provisional 45.6 62 0.0013 34.6 7.3 24 202-225 256-279 (384)
239 PLN03170 chalcone synthase; Pr 45.5 73 0.0016 34.4 7.8 70 419-500 121-194 (401)
240 PRK08722 3-oxoacyl-(acyl carri 45.4 45 0.00097 36.1 6.2 76 202-277 280-362 (414)
241 COG0304 FabB 3-oxoacyl-(acyl-c 43.9 43 0.00094 36.4 5.8 44 202-245 278-322 (412)
242 PLN00415 3-ketoacyl-CoA syntha 43.8 77 0.0017 35.1 7.7 70 419-500 149-222 (466)
243 PRK07855 lipid-transfer protei 43.8 81 0.0018 33.9 7.8 24 203-226 269-292 (386)
244 KOG2707 Predicted metalloprote 43.7 56 0.0012 34.8 6.2 48 200-247 84-136 (405)
245 PRK09116 3-oxoacyl-(acyl carri 42.8 42 0.0009 36.3 5.5 45 202-246 277-322 (405)
246 PRK07937 lipid-transfer protei 42.8 79 0.0017 33.6 7.5 78 203-286 249-334 (352)
247 PRK06333 3-oxoacyl-(acyl carri 42.4 43 0.00094 36.1 5.6 44 202-245 290-334 (424)
248 cd00833 PKS polyketide synthas 42.3 55 0.0012 34.8 6.3 77 201-277 280-365 (421)
249 PF02801 Ketoacyl-synt_C: Beta 41.5 35 0.00075 30.0 3.8 60 419-485 38-104 (119)
250 PLN03171 chalcone synthase-lik 41.3 88 0.0019 33.7 7.7 70 419-500 123-196 (399)
251 TIGR01796 CM_mono_aroH monofun 41.2 68 0.0015 28.7 5.5 52 202-257 22-76 (117)
252 PRK08313 acetyl-CoA acetyltran 40.9 1.1E+02 0.0025 32.7 8.4 24 202-225 257-282 (386)
253 PF07736 CM_1: Chorismate muta 40.7 58 0.0013 29.2 5.0 54 199-256 19-75 (118)
254 PRK07910 3-oxoacyl-(acyl carri 40.5 59 0.0013 35.3 6.2 45 202-246 288-333 (418)
255 COG1153 FwdD Formylmethanofura 39.1 29 0.00063 31.1 2.8 50 475-531 31-87 (128)
256 PRK06289 acetyl-CoA acetyltran 38.8 1.2E+02 0.0026 32.6 8.2 42 202-247 278-319 (403)
257 PRK06365 acetyl-CoA acetyltran 37.8 1.3E+02 0.0027 32.9 8.2 24 203-226 296-321 (430)
258 TIGR02845 spore_V_AD stage V s 37.6 1.4E+02 0.003 31.5 8.1 90 201-292 203-308 (327)
259 PLN02192 3-ketoacyl-CoA syntha 37.0 1.2E+02 0.0027 33.9 8.0 70 419-500 191-264 (511)
260 PLN02932 3-ketoacyl-CoA syntha 36.3 1.2E+02 0.0025 33.8 7.7 54 419-484 163-220 (478)
261 TIGR02446 FadI fatty oxidation 34.5 77 0.0017 34.6 5.9 24 203-226 314-337 (430)
262 PRK06157 acetyl-CoA acetyltran 34.3 1.9E+02 0.0042 31.0 8.9 42 202-247 268-311 (398)
263 PLN02377 3-ketoacyl-CoA syntha 33.8 1.4E+02 0.003 33.5 7.7 53 419-483 187-243 (502)
264 PRK00768 nadE NAD synthetase; 33.7 5.4E+02 0.012 26.4 13.8 151 141-316 3-179 (268)
265 PRK08304 stage V sporulation p 33.5 2.1E+02 0.0047 30.3 8.7 89 202-292 210-315 (337)
266 PLN02836 3-oxoacyl-[acyl-carri 32.9 92 0.002 33.9 6.2 44 202-245 301-345 (437)
267 cd02185 AroH Chorismate mutase 31.0 1.3E+02 0.0029 26.9 5.7 53 202-257 22-76 (117)
268 PF07451 SpoVAD: Stage V sporu 30.6 88 0.0019 32.8 5.1 88 201-290 204-307 (329)
269 PRK06066 acetyl-CoA acetyltran 28.4 1.5E+02 0.0032 31.9 6.8 24 203-226 259-284 (385)
270 COG2518 Pcm Protein-L-isoaspar 28.2 52 0.0011 32.4 3.0 39 469-509 51-89 (209)
271 PRK13410 molecular chaperone D 27.4 1.5E+02 0.0033 34.3 7.0 63 202-268 311-373 (668)
272 PF08392 FAE1_CUT1_RppA: FAE1/ 27.4 2.4E+02 0.0051 29.3 7.7 70 419-500 98-171 (290)
273 TIGR02435 CobG precorrin-3B sy 27.0 3.8E+02 0.0082 28.7 9.6 91 159-263 273-372 (390)
274 KOG1394 3-oxoacyl-(acyl-carrie 26.9 70 0.0015 34.2 3.7 45 202-246 303-348 (440)
275 KOG1794 N-Acetylglucosamine ki 26.7 3.6E+02 0.0079 28.2 8.7 112 202-322 49-165 (336)
276 PLN02854 3-ketoacyl-CoA syntha 26.6 1.9E+02 0.0041 32.6 7.3 70 419-500 203-276 (521)
277 KOG1406 Peroxisomal 3-ketoacyl 24.9 68 0.0015 32.8 3.1 27 200-226 272-298 (408)
278 PRK09585 anmK anhydro-N-acetyl 24.1 1.7E+02 0.0036 31.4 6.1 58 190-247 61-126 (365)
279 PF08745 UPF0278: UPF0278 fami 22.4 29 0.00063 34.0 0.0 93 126-224 41-136 (205)
280 COG3223 Predicted membrane pro 22.3 1.6E+02 0.0034 27.0 4.6 24 47-70 76-99 (138)
281 PRK08329 threonine synthase; V 21.9 81 0.0017 33.3 3.2 34 473-506 312-345 (347)
282 PRK05183 hscA chaperone protei 21.9 2.2E+02 0.0049 32.6 7.0 62 202-267 311-372 (616)
283 KOG0103 Molecular chaperones H 21.5 1.8E+02 0.0038 33.7 5.8 74 194-272 301-382 (727)
284 PRK07103 polyketide beta-ketoa 21.4 2.2E+02 0.0047 30.7 6.5 24 203-226 284-307 (410)
285 PLN03184 chloroplast Hsp70; Pr 21.1 2.4E+02 0.0051 32.8 7.0 63 202-268 348-410 (673)
286 PTZ00009 heat shock 70 kDa pro 20.8 2.2E+02 0.0047 32.9 6.7 64 202-268 315-378 (653)
287 PTZ00186 heat shock 70 kDa pre 20.1 2.4E+02 0.0051 32.7 6.7 62 202-268 336-398 (657)
288 TIGR02350 prok_dnaK chaperone 20.0 2.1E+02 0.0047 32.4 6.4 63 202-268 307-369 (595)
No 1
>PLN02854 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.4e-117 Score=956.82 Aligned_cols=495 Identities=57% Similarity=1.008 Sum_probs=468.5
Q ss_pred cceecccccCCcccccccchhhhhhhHHHHHHH---HHHHHHHHHHHHHHHHhccCCHHHHHHHHHhh--hhhhhHHHHH
Q 009313 29 TFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHA---IYLATIPVLLLVFSAEVGSLSREELWEKLWED--TRHDLASVLG 103 (537)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 103 (537)
.+++++|++||||++|||+||||+||||+++|. ++++++|++ ++++.++.+++++|++ .+|.. ++++++++++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 94 (521)
T PLN02854 17 SAVIKIRQRLPDFLQSVKLKYVKLGYGYSCNPATILFFLIILPLT-IATLVQITGLEFDTVS-ELWSNQALHLDTATRLT 94 (521)
T ss_pred ceecchhhhCchHHHhhcceeeecchHHHHhhhHHHHHHHHHHHH-HHHHHHHhcCCHHHHH-HHHHHhhhHHhHHHHHH
Confidence 567789999999999999999999999999999 677889987 7788899999999987 78987 7888999999
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeEEccCCccc
Q 009313 104 FFGVFVFTLSVYFMSRPRSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMS 183 (537)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~ 183 (537)
+++++++++++|+|+||++||++||+||+|++++++|.+.|+|+.+..|.|++++++||+||++|||||++||+|+..++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sg~g~~ty~P~~~~~ 174 (521)
T PLN02854 95 GSAFLLFLLGLYWAKRSKPVYLVDFACYKPEDERKISVDSFLTMTEENGSFEDETVQFQRRISTRSGLGDETYLPRGITS 174 (521)
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCccccCccccC
Confidence 98999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cccccchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHH
Q 009313 184 AEENCMTMKHGRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAG 263 (537)
Q Consensus 184 ~p~~~~~ma~~~~ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~g 263 (537)
.| +..+|+++|+|++++++.|++++|+++|++|+|||+||++||+++++|+++++|+++||+++++.+|||+||||+||
T Consensus 175 ~~-~~~~~~~~r~ea~~v~~~~~~~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~~i~afdLsgmGCSgg 253 (521)
T PLN02854 175 RP-PNLCMEEARAEAEAVMFGALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDIKSYNLGGMGCSAG 253 (521)
T ss_pred CC-CcchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCCCceEEecccchhhhH
Confidence 88 77899999999999999999999999999999999999999999999999999999999998999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEEecccccccCCCCCcCCCccccccccceEEEEEeccCccccccceeeeeEEEEEeccC
Q 009313 264 VIGVDLARDMLQANPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGAD 343 (537)
Q Consensus 264 l~AL~lA~~lL~~g~~~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~t~~~sd 343 (537)
++||++|+++|+++++++||||++|.+|.+||.++||++++++++|||||||+||++++.++++++|+|.+++++++++|
T Consensus 254 l~aL~lA~~lL~~~~~~~aLVVstE~~S~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~~~k~~L~~~v~t~~~ad 333 (521)
T PLN02854 254 LISIDLANDLLKANPNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRKRSKYQLVHTVRTHKGAD 333 (521)
T ss_pred HHHHHHHHHHHHhCCCCeEEEEEEeeeecCCCCCCchhhhcceeeeccceeEEEEecccccccccchheeeEEEEEEeeC
Confidence 99999999999999999999999999999999999999999999999999999999976444467899999999999999
Q ss_pred CCccccceeccccccccccccchhhhhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCC
Q 009313 344 DRSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKP 423 (537)
Q Consensus 344 ~~~~~~v~~~~d~~G~~g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~ 423 (537)
++.|+|+++++|+.|..|+++++|+|.+++++++.|++++||.|+|++|+++|+...+.+ .+.+ +|+++
T Consensus 334 ~~~~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~-~L~~----------~gl~~ 402 (521)
T PLN02854 334 DKNYNCVYQREDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRR-KLLK----------AKVKP 402 (521)
T ss_pred CCccCeEEeccCCCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHH-HHHH----------cCCCc
Confidence 999999999999888889999999999999999999999999999999999877776544 4443 78999
Q ss_pred CCcCccccccEEEEcCCCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEch
Q 009313 424 YIPDYKLAFEHFCVHAASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGS 503 (537)
Q Consensus 424 y~pdf~~did~~~~H~~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd~VlliafGs 503 (537)
|+|||++||||||+||+|++++|+++++||+++++.++|+++++|||||||||+||+|++++++|++++||+|||+|||+
T Consensus 403 ~~pd~~~didhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~~~~~kGrik~GD~Vl~iaFGs 482 (521)
T PLN02854 403 YIPDFKLAFEHFCIHAGGRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELAYTEAKGRVSAGDRVWQIAFGS 482 (521)
T ss_pred cCCcccccCcEEEECCCCHHHHHHHHHHcCCCcccccchHHHhhhcCChHhhHHHHHHHHHHHcCCCCCCCEEEEEEEch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhheeEEEeccCCCC--CCCCcccccccCCCCC
Q 009313 504 GFKCNSVVWQAMRRVKKP--ARNPWLDCVDRYPVAL 537 (537)
Q Consensus 504 G~~~~s~v~r~~~~~~~~--~~~~w~~~~~~~p~~~ 537 (537)
||+||++||||+|++++. .+|||+||||+|||++
T Consensus 483 Gft~~sav~~~~~~~~~~~~~~~~w~~~i~~yp~~~ 518 (521)
T PLN02854 483 GFKCNSAVWKALREIPTGESTGNPWADSIDRYPVKV 518 (521)
T ss_pred hhhhhheeeEEeccCCccccCCCCchhhHhhCCCCC
Confidence 999999999999998865 5799999999999975
No 2
>PLN02192 3-ketoacyl-CoA synthase
Probab=100.00 E-value=3.2e-118 Score=959.90 Aligned_cols=495 Identities=58% Similarity=1.026 Sum_probs=471.1
Q ss_pred cceecccccCCcccccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHhhhhhhhHHHHHHHHHH
Q 009313 29 TFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVLGFFGVF 108 (537)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (537)
...+++|++||||+||+|+||||+||||+++|.++++++|++ ++++.++.+++++++. .+|..+++++++++.+++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 87 (511)
T PLN02192 10 LIEPSSSRKLPDFKKSVKLKYVKLGYHYLITHGMYLFLSPLV-VVIAAQLSTFSIQDLH-DLWEHLKFNLISVILCSTLL 87 (511)
T ss_pred ccccchhhhcchHHHhhhhhhhhhhhHHHHhhhHHHHHHHHH-HHHHHHHhhcCHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 344577999999999999999999999999999999999987 7888999999999987 78988888899999898888
Q ss_pred HHHHHHHHhcCCCceEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeEEccCCcccccccc
Q 009313 109 VFTLSVYFMSRPRSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENC 188 (537)
Q Consensus 109 ~~~~~~~~~~~~~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~p~~~ 188 (537)
++++++|+|+||++|||+||+||+|++++++|.+.|+|+.+..|.|++++++||+||++|||||++||+|+..++.| +.
T Consensus 88 ~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sglg~~t~~p~~~~~~~-~~ 166 (511)
T PLN02192 88 VFLSTLYFLTRPRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFTEENLEFQRKILERSGLGESTYLPEAVLNVP-PN 166 (511)
T ss_pred HHHHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCcccCChhhccCC-CC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988 77
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHH
Q 009313 189 MTMKHGRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVD 268 (537)
Q Consensus 189 ~~ma~~~~ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~ 268 (537)
.+|+++|+|+++++++|+++||+++|++|+|||+||++|++++++|+++++|+++||+++++.+|||+||||+||++||+
T Consensus 167 ~~~~~~~~Ea~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLd 246 (511)
T PLN02192 167 PCMAEARKEAETVMFGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISID 246 (511)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999899999999999999999999
Q ss_pred HHHHHHHcCCCCeEEEEEecccccccCCCCCcCCCccccccccceEEEEEeccCccccccceeeeeEEEEEeccCCCccc
Q 009313 269 LARDMLQANPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFR 348 (537)
Q Consensus 269 lA~~lL~~g~~~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~t~~~sd~~~~~ 348 (537)
+|+++|+++++++||||++|.+|.+||.++||+++++|++|||||||+||++++.++++++|+|.+.++++.++|++.|+
T Consensus 247 lA~~lL~a~~~~~aLVVstE~~S~n~y~g~drs~lv~n~LFgDGAaAvLLs~~~~~~~~~k~~L~~~vrt~~~~dd~~~~ 326 (511)
T PLN02192 247 LAKHLLQVHPNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLVHTVRTHKGADDKCFA 326 (511)
T ss_pred HHHHHHHcCCCCeEEEEEEEeccccCCCCCCHHHHhccccccccceEEEEeccccccccccceeeeeEEEEecCChhhcc
Confidence 99999999999999999999999999999999999999999999999999997655556789999999999999999999
Q ss_pred cceeccccccccccccchhhhhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCc
Q 009313 349 SVYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDY 428 (537)
Q Consensus 349 ~v~~~~d~~G~~g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf 428 (537)
|+++++|++|+.|++|+||+|.+++++++.|++++||.++|.+|+.+|++.+.++++++. .+++|+|+|
T Consensus 327 ~v~~~ed~~g~~g~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~gr~vfk~-----------~~~~~~p~~ 395 (511)
T PLN02192 327 CVTQEEDSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKM-----------KLKPYIPDF 395 (511)
T ss_pred ceecccccccceeeEecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEcChHHHHH-----------HhhhccHHH
Confidence 999999999999999999999999999999999999999999999888888889999984 456689999
Q ss_pred cccccEEEEcCCCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEchHHHhh
Q 009313 429 KLAFEHFCVHAASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCN 508 (537)
Q Consensus 429 ~~did~~~~H~~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~ 508 (537)
+.+|||||+||+|++++|.++++||++++++++|++++++||||||||+||+|++++++|++++||+|||+|||+||+|+
T Consensus 396 ~~~Idhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSaSI~~aL~~~eakgrik~GDrVl~iaFGsGf~~~ 475 (511)
T PLN02192 396 KLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCN 475 (511)
T ss_pred HHhhceEeeccCCHHHHHHHHHHcCCCchhhhHHHHHHhHcCChHHhHHHHHHHHHHHcCCCCCCCEEEEEEEcchHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred heeEEEeccCCCCC-CCCcccccccCCCCC
Q 009313 509 SVVWQAMRRVKKPA-RNPWLDCVDRYPVAL 537 (537)
Q Consensus 509 s~v~r~~~~~~~~~-~~~w~~~~~~~p~~~ 537 (537)
++||||+|+++++. .|||+||||+|||++
T Consensus 476 sav~~~~~~~~~~~~~~~w~~~i~~yp~~~ 505 (511)
T PLN02192 476 SAVWKALRTVNPAKEKNPWMDEIHEFPVDV 505 (511)
T ss_pred hhheeeecccCCcccCCCchhhHHhCCCCC
Confidence 99999999998754 499999999999975
No 3
>PLN02377 3-ketoacyl-CoA synthase
Probab=100.00 E-value=4.5e-115 Score=937.44 Aligned_cols=495 Identities=60% Similarity=1.047 Sum_probs=470.0
Q ss_pred cceecccccCCcccccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHhhhhhhhHHHHHHHHHH
Q 009313 29 TFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVLGFFGVF 108 (537)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (537)
+++|++|++||||++|||+||||+||||+++|.++++++|++ ++++.++.+++++|++ .+|..+++++++++++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 83 (502)
T PLN02377 6 EIRIHQTRMLPDFLQSVNLKYVKLGYHYLISNLLTLCFIPLI-IIISIEASQMNPDDLR-QLWIHLQYNLVSIIICSAFL 83 (502)
T ss_pred eEEEeehhhCchHHHhhhhhhhhhhhHHHHhhhHHHHHHHHH-HHHHHHHhhcCHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 688999999999999999999999999999999999999988 7788899999999987 78988888899998888888
Q ss_pred HHHHHHHHhcCCCceEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeEEccCCcccccccc
Q 009313 109 VFTLSVYFMSRPRSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENC 188 (537)
Q Consensus 109 ~~~~~~~~~~~~~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~p~~~ 188 (537)
++++++|+|+||++||++||+||+|++++++|.+.|+|+.+..|.|++++++||+||+++|||++++|+|+..++.| +.
T Consensus 84 ~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sgig~~t~~p~~~~~~~-~~ 162 (502)
T PLN02377 84 VFGLTVYIMTRPRPVYLVDYSCYRAPDHLKAPFARFMEHSRLTGDFDDSSLEFQRKILERSGLGEDTYVPEAMHYIP-PR 162 (502)
T ss_pred HHHHHHHHHcCCCCEEEEeeeeecCCccccccHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCCCccccCchhccCC-cc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988877 77
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHH
Q 009313 189 MTMKHGRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVD 268 (537)
Q Consensus 189 ~~ma~~~~ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~ 268 (537)
.+|+++++|++++++.|+++||+++|++|+|||+||++|++++++|+++++|+++||+++++.+|||+||||+||++||+
T Consensus 163 ~~~~~~~~ea~~l~~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~ 242 (502)
T PLN02377 163 PSMAAAREEAEQVMFGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVD 242 (502)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999899999999999999999999
Q ss_pred HHHHHHHcCCCCeEEEEEecccccccCCCCCcCCCccccccccceEEEEEeccCccccccceeeeeEEEEEeccCCCccc
Q 009313 269 LARDMLQANPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFR 348 (537)
Q Consensus 269 lA~~lL~~g~~~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~t~~~sd~~~~~ 348 (537)
+|+++++++++++||||++|.+|.+|+.++++++++++++|||||||+||++++.++++++|+|.++++++.++|++.|+
T Consensus 243 lA~~ll~~~~~~~aLVVstE~~S~~~~~~d~~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~~l~~iv~t~~~~d~~~~~ 322 (502)
T PLN02377 243 LAKDMLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRTHRGADDKAFR 322 (502)
T ss_pred HHHHHHHcCCCCEEEEEEEeccccccCCCCCccccccceeeccccEEEEEecccccccccccccceEEEEEEEEcCCccc
Confidence 99999999999999999999999999888888999999999999999999997655556789999999999999999999
Q ss_pred cceeccccccccccccchhhhhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCc
Q 009313 349 SVYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDY 428 (537)
Q Consensus 349 ~v~~~~d~~G~~g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf 428 (537)
|+++++|+.|+.|+++++|+|.+++++++.|++++||.++|++|++.++.....+++++ ..+++|+|+|
T Consensus 323 ~i~~~~d~~G~~g~~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~~~~~~~~-----------~~l~~~~p~~ 391 (502)
T PLN02377 323 CVYQEQDDAGKTGVSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATLVVKKLFN-----------KKMKPYIPDF 391 (502)
T ss_pred eeeeccccCCCCCCCCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHH-----------HHHhhccCCc
Confidence 99999998899999999999999999999999999999999999988777666677776 3456788999
Q ss_pred cccccEEEEcCCCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEchHHHhh
Q 009313 429 KLAFEHFCVHAASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCN 508 (537)
Q Consensus 429 ~~did~~~~H~~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~ 508 (537)
++||||||+||+|++++|+++++|||+++++++|++++++||||||||+||+|++++++|++++||+|||+|||+||+|+
T Consensus 392 ~~didhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~r~GNTSSaSI~~aL~~~~~~grik~Gd~VlliaFGsGf~~~ 471 (502)
T PLN02377 392 KLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMRKGNRVWQIAFGSGFKCN 471 (502)
T ss_pred HhhcCEEEECCCCHHHHHHHHHHcCCCcccchHHHHHHHhcCCchhhHHHHHHHHHHHcCCCCCCCeEEEEEEccccEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred heeEEEeccCCCCCCCCcccccccCCCCC
Q 009313 509 SVVWQAMRRVKKPARNPWLDCVDRYPVAL 537 (537)
Q Consensus 509 s~v~r~~~~~~~~~~~~w~~~~~~~p~~~ 537 (537)
++||||+|+++++.+|||+||||+|||++
T Consensus 472 s~v~~~~~~~~~~~~~~w~~~i~~yp~~~ 500 (502)
T PLN02377 472 SAVWEALRHVKPSNNSPWEDCIDKYPVKL 500 (502)
T ss_pred eEEEEEecCCCCCCCCCchhhHhhCCCcc
Confidence 99999999998877899999999999975
No 4
>PLN02932 3-ketoacyl-CoA synthase
Probab=100.00 E-value=4.7e-107 Score=870.71 Aligned_cols=470 Identities=50% Similarity=0.892 Sum_probs=444.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhcCCCceEEEEEeEEeC
Q 009313 54 YHYLINHAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVLGFFGVFVFTLSVYFMSRPRSVYLVDFACYRP 133 (537)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~I~~~~~y~P 133 (537)
+.|+++|.++++++|++ ++++.++.+++.++++ .+|..+++++++++.+++++++++++|+|+||++||++||+||+|
T Consensus 1 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyl~d~~c~~p 78 (478)
T PLN02932 1 FNYLMAHRFKLCFLPLM-VGIAMEASRLSTQDLQ-NFYLYLQNNLTSLTMFFLYLALGSTLYLMTRPKPVYLVDFSCYLP 78 (478)
T ss_pred ChhHHHhHHHHHHHHHH-HHHHHHHhhcCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeeeecC
Confidence 35799999999999988 7788899999999987 788888888889988888888999999999999999999999999
Q ss_pred CCCcccCHHHHHHHHhcc---CCCChhh---HHHHHHHHHHcCCceeEEccCCccccccccchhhhhhhhHHHHHHHHHH
Q 009313 134 SDDLKVTREQFIEVAGKW---SKSDEAS---LDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMVMFGALD 207 (537)
Q Consensus 134 ~~~~~vt~e~~~e~~~~~---~~~~~~~---~~f~~~i~~~sGI~~r~~~~~~~~~~p~~~~~ma~~~~ea~~l~~~Aa~ 207 (537)
++++++|.+.++++.... |.|++++ ++||+||++||||++|||+|+..+..| +..+|+.+++|+++++++|++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsGig~~t~~p~~~~~~~-~~~~~~~~~~ea~~la~~Aa~ 157 (478)
T PLN02932 79 PSHLKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSGLGQETYIPEGLQCLP-LQQNLAVSRKETEEVIIGAVD 157 (478)
T ss_pred cccccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcCCCCceeeccccccCC-HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998666 7898887 999999999999999999999988877 778999999999999999999
Q ss_pred HHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEe
Q 009313 208 ELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVST 287 (537)
Q Consensus 208 ~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~ 287 (537)
+||+++|++|+|||+||++|++++++|+++++|+++||+++++.+|||+||||+||++||++|+++++++++++||||++
T Consensus 158 ~aL~~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVst 237 (478)
T PLN02932 158 NLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVST 237 (478)
T ss_pred HHHHHcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence 99999999999999999999988899999999999999998999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCcCCCccccccccceEEEEEeccCccccccceeeeeEEEEEeccCCCccccceeccccccccccccchh
Q 009313 288 EMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVYQEEDEQGFRGLKVSKN 367 (537)
Q Consensus 288 E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~t~~~sd~~~~~~v~~~~d~~G~~g~~ls~d 367 (537)
|.+|.+||.+++|+|++++++|||||||+||++++.++++++|+|.++++++.++|++.|+|+++++|++|..|+.|+++
T Consensus 238 E~~S~~~~~~d~r~~l~t~~LFgDGAAAvlLs~~~~~~~~~~~~L~~~v~t~~~ad~~~~~~v~~~~d~~G~~g~~Lsk~ 317 (478)
T PLN02932 238 ENITQNLYLGNNKSMLVTNCLFRIGGAAILLSNRSRDRKRAKYELVHTVRVHTGADDRSYECATQEEDEDGIVGVSLSKN 317 (478)
T ss_pred eecccccCCCcchhhhccceeecccceEEEEecccccccCcceEEEeeeeeeeccCCCccccceeecccCCcceeeECcc
Confidence 99999999888899999999999999999999977544467999999999999999999999999999899999999999
Q ss_pred hhhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccEEEEcCCCHHHHHH
Q 009313 368 IMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVHAASKTVLDE 447 (537)
Q Consensus 368 l~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H~~g~~vl~~ 447 (537)
+|.++++++|+||+++||.++|++|+.+|++++..+++++. ..+.|+|+|+++|||||+||+|++++|+
T Consensus 318 lp~~~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~~~~~k~-----------~~~~~~~~~~~~id~f~iHqggr~IIda 386 (478)
T PLN02932 318 LPMVAARTLKINIATLGPLVLPLSEKFHFFVRFVKKKFFNP-----------KLKHYIPDFKLAFEHFCIHAGGRALIDE 386 (478)
T ss_pred chHHHHHHHhhhhhccccccccchhhhHHHHHHhHHHHHHH-----------HhhcCcHhHHhhhceEEEccCCHHHHHH
Confidence 99999999999999999999999999999999999999874 3456889999999999999999999999
Q ss_pred HHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEchHHHhhheeEEEeccCCCCCCCCcc
Q 009313 448 LQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCNSVVWQAMRRVKKPARNPWL 527 (537)
Q Consensus 448 l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~~~~~~~~~~~~w~ 527 (537)
++++||++++++++|+++++|||||||||+||+|++++++|++++||+||++|||+||+||++|||++|+++++.+|||+
T Consensus 387 v~k~LgL~~~~~e~s~~tL~rfGNTSSaSI~~~L~~~ea~grik~Gd~vl~iaFGsGf~~~s~vw~~~~~~~~~~~~~w~ 466 (478)
T PLN02932 387 MEKNLHLTPLDVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMKKGDRIWQIALGSGFKCNSSVWVALRNVKPSANNPWE 466 (478)
T ss_pred HHHHcCCChHHHHHHHHHHHHhCChhhhHHHHHHHHHHHcCCCCCCCEEEEEEEeccHHHHHHHHHHhcCCCCcCCCCch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999887789999
Q ss_pred cccccCCCCC
Q 009313 528 DCVDRYPVAL 537 (537)
Q Consensus 528 ~~~~~~p~~~ 537 (537)
||||+|||++
T Consensus 467 ~~i~~yp~~~ 476 (478)
T PLN02932 467 DCLHKYPVEI 476 (478)
T ss_pred hhHhhCCCCC
Confidence 9999999975
No 5
>PLN00415 3-ketoacyl-CoA synthase
Probab=100.00 E-value=2e-98 Score=795.60 Aligned_cols=430 Identities=51% Similarity=0.924 Sum_probs=405.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhcCCCceEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeE
Q 009313 96 HDLASVLGFFGVFVFTLSVYFMSRPRSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDET 175 (537)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~ 175 (537)
+.+..+-+.++++++++++|+++||++||++||+||+|++++++|.+.++|+....|.|++++++||+||+++|||++++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~F~~~i~~rSGlg~et 112 (466)
T PLN00415 33 FSPFPVKIGLLLISIFFYAYSTTRSKPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTEETIQFMTRILNRSGLGDDT 112 (466)
T ss_pred CChhHHHHHHHHHHHHHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCCCe
Confidence 44555555556666777899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccCCccccccccchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEe
Q 009313 176 YIPKVVMSAEENCMTMKHGRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNL 255 (537)
Q Consensus 176 ~~~~~~~~~p~~~~~ma~~~~ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l 255 (537)
|.|+..++.| +..+|+++++|+++.++.|++++|+++|++|+|||+||++|++++++|+++++|+++||+++++.+|||
T Consensus 113 ~~p~~~~~~~-~~~~~~~~~~e~em~i~~A~~~aL~~aGi~p~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~~~dL 191 (466)
T PLN00415 113 YSPRCMLTSP-PTPSMYEARHESELVIFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKTYNL 191 (466)
T ss_pred eeCCccccCC-CCCChhhhHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCCCchHHHHHHHHhCCCCCceEEEe
Confidence 9999988877 677999999999999999999999999999999999999999888999999999999999999999999
Q ss_pred cCccchHHHHHHHHHHHHHHcCCCCeEEEEEecccccccCCCCCcCCCccccccccceEEEEEeccCccccccceeeeeE
Q 009313 256 GGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLI 335 (537)
Q Consensus 256 ~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~ 335 (537)
+||||+||++||++|+++++++++++||||++|.+|.+||+++||+++++|++|||||||+||++++.++.+++|+|.++
T Consensus 192 ~gmGCsggv~aL~lA~~ll~a~~~~~aLVVs~E~~S~~~~~~~dr~~lv~n~LFgDGAAAvlLs~~~~~~~~~~~~L~~~ 271 (466)
T PLN00415 192 SGMGCSAGAISVDLATNLLKANPNTYAVIVSTENMTLSMYRGNDRSMLVPNCLFRVGGAAVMLSNRSQDRVRSKYELTHI 271 (466)
T ss_pred ccccchHHHHHHHHHHHHHHhCCCCEEEEEEEecccccccCCCcHhHhccceeecccceEEEEecCcccccCccceeeeE
Confidence 99999999999999999999999999999999999998889999999999999999999999999876655689999999
Q ss_pred EEEEeccCCCccccceeccccccccccccchhhhhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhccc
Q 009313 336 VRTHTGADDRSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRS 415 (537)
Q Consensus 336 v~t~~~sd~~~~~~v~~~~d~~G~~g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~ 415 (537)
++++.+.+++.|.|+++++|++|..|+.|+||+|.+++++++.|+++++|.++|++|+++|....+.+++++
T Consensus 272 vrt~~~~~d~~~~~~~~~~d~~G~~gv~Lsk~lp~va~~~l~~ni~~l~p~vlp~~e~~~~~~~~i~~~~~~-------- 343 (466)
T PLN00415 272 VRTHKGSSDKHYTCAEQKEDSKGIVGVALSKELTVVAGDTLKTNLTALGPLVLPLSEKLRFILFLVKSKLFR-------- 343 (466)
T ss_pred EEecCCCChhhhcceeeeecCCCcceEEEChHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHhhhhhh--------
Confidence 999999899999999999999999999999999999999999999999999999999999888888888876
Q ss_pred ccccCCCCCCcCccccccEEEEcCCCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCE
Q 009313 416 SSLASTKPYIPDYKLAFEHFCVHAASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDR 495 (537)
Q Consensus 416 ~~~~gl~~y~pdf~~did~~~~H~~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd~ 495 (537)
.++++|+|||+..++|||+|+||++|+|+++++|||+++++++||++|+|||||||+|+||+|+|++++|++++||+
T Consensus 344 ---~~~~~~~pd~~~~~~hf~iHpGGraVLdave~~LgL~~~~le~Sr~vL~r~GN~SSsSV~yvL~~~~~~~~~~~Gdr 420 (466)
T PLN00415 344 ---LKVSPYVPDFKLCFKHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEAKCRVKRGDR 420 (466)
T ss_pred ---ccCCCCCCCccccceeEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhhHHHHHHHHHhhccCCCCCE
Confidence 56778999998899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEchHHHhhheeEEEeccCCCCCC---CCcccccccCCCCC
Q 009313 496 VWQIAFGSGFKCNSVVWQAMRRVKKPAR---NPWLDCVDRYPVAL 537 (537)
Q Consensus 496 VlliafGsG~~~~s~v~r~~~~~~~~~~---~~w~~~~~~~p~~~ 537 (537)
+||+|||+||+|+++|||++|+++++.+ |||+||||+|||++
T Consensus 421 vl~iaFGpGf~~es~v~~~~~~~~~~~~~~~~~w~~~i~~yp~~~ 465 (466)
T PLN00415 421 VWQLAFGSGFKCNSIVWRALRTIPANESLVGNPWGDSVHKYPVHV 465 (466)
T ss_pred EEEEEEcCcchhhHhHHHHhccCCcccccCCCCchhhHHhCCCCC
Confidence 9999999999999999999999886543 99999999999975
No 6
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=100.00 E-value=1.7e-75 Score=584.97 Aligned_cols=290 Identities=60% Similarity=1.032 Sum_probs=283.4
Q ss_pred HHhcCCCceEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeEEccCCccccccccchhhhh
Q 009313 115 YFMSRPRSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHG 194 (537)
Q Consensus 115 ~~~~~~~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~p~~~~~ma~~ 194 (537)
|+|+||++|||+||+||+|++++++|.+.++++++..+.|++++++||+||+++|||+++||+|+..+..| +..+|.++
T Consensus 1 y~~~R~r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~f~~~sl~F~~kIlerSGlG~eTy~P~~~~~~p-~~~s~~~a 79 (290)
T PF08392_consen 1 YFMRRPRPVYLVDFACYKPPDELRVSREEFIEHARRCGRFDEESLDFQRKILERSGLGDETYLPPALHEIP-PDPSLAAA 79 (290)
T ss_pred CccCCCCCEEEEeeeecCCCcccccCHHHHHHHHHhcccCChhHHHHHHHHHHhcCCCccccCCcccccCC-CcccHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999998888 77899999
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHH
Q 009313 195 RLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDML 274 (537)
Q Consensus 195 ~~ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL 274 (537)
++|++++++.|++++|+++|++|+|||+||+|||.|+++||++++|+|+|||++++.+||++||||++|+++|++|+++|
T Consensus 80 ~~Eae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL 159 (290)
T PF08392_consen 80 REEAEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLL 159 (290)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCeEEEEEecccccccCCCCCcCCCccccccccceEEEEEeccCccccccceeeeeEEEEEeccCCCccccceecc
Q 009313 275 QANPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVYQEE 354 (537)
Q Consensus 275 ~~g~~~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~t~~~sd~~~~~~v~~~~ 354 (537)
+.+++.+||||++|++|.+||.|+||+|+++||||||||||+||||++.+++++||+|.|++|||.++||++|+|++|+|
T Consensus 160 ~~~p~~~ALVVstE~~s~~~Y~G~~rsmlv~NcLFr~GgAAvLLSn~~~~~~~aky~L~~~vRt~~g~~d~ay~~v~q~e 239 (290)
T PF08392_consen 160 QAHPNSYALVVSTENISANWYRGNDRSMLVSNCLFRMGGAAVLLSNKPSDRRRAKYELLHTVRTHTGADDDAYRCVFQEE 239 (290)
T ss_pred HhCCCcEEEEEEEeecccccccCCcHHHhhccccccCCceeEEeecCccccccchhhhhheeeeecCCCCCceeeEEEeE
Confidence 99999999999999999999999999999999999999999999999999889999999999999999999999999999
Q ss_pred ccccccccccchhhhhhhcccccccccccCCCccccchhhHHHHHHHHHHH
Q 009313 355 DEQGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHL 405 (537)
Q Consensus 355 d~~G~~g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~v 405 (537)
|++|..|++|+||++.++|++||.||+++||+|||++||++|.++++.||+
T Consensus 240 D~~g~~Gv~lsk~l~~vag~al~~ni~~l~p~vLP~sE~~~~~~~~~~rk~ 290 (290)
T PF08392_consen 240 DEEGIVGVSLSKDLMKVAGKALKANITTLGPLVLPLSEQLRFAASFIARKV 290 (290)
T ss_pred cCCCceEEEEecchHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999999999888877663
No 7
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=100.00 E-value=8.6e-56 Score=453.40 Aligned_cols=316 Identities=19% Similarity=0.290 Sum_probs=270.0
Q ss_pred CceEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeEEccCCccccccccchhhhhhhhHHH
Q 009313 121 RSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASM 200 (537)
Q Consensus 121 ~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~p~~~~~ma~~~~ea~~ 200 (537)
.+++|.++|+|+|+ ++++|+++.+.... +++ ||..++||++||+..+++ ...+|+
T Consensus 2 ~~a~i~g~G~~lP~--~~vtn~d~e~~~~t----sde------wI~~rtGir~R~~a~~~e-----~~s~la-------- 56 (323)
T COG0332 2 MNAKILGIGSYLPE--RVVTNADLEKRVDT----SDE------WIETRTGIRERRIAADDE-----TTSDLA-------- 56 (323)
T ss_pred CcceEEEEEeecCC--cccChHHHHhccCC----Ccc------eeeeecCCceeeecCCCc-----cHHHHH--------
Confidence 46899999999999 99999999866553 454 799999999999998765 356775
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCC
Q 009313 201 VMFGALDELFEKTKVRPKDVGILVVNC-SIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPN 279 (537)
Q Consensus 201 l~~~Aa~~aL~~agi~~~dId~LI~~s-s~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~ 279 (537)
++|+++||+++|++|+|||+||++| +|+++.|+++++|+++||+. ++.+||++ .+|+|+++||++|..++++|..
T Consensus 57 --~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~-~~~afDl~-aaCsgf~yaL~~A~~~i~sG~~ 132 (323)
T COG0332 57 --VEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLG-GAPAFDLQ-AACSGFLYALSVADGLIRSGGY 132 (323)
T ss_pred --HHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCC-Ccceeech-hhhHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999996 57899999999999999998 59999999 8999999999999999999999
Q ss_pred CeEEEEEecccccccCCCCCcCCCccccccccceEEEEEeccCccccccceeeeeEEEEEeccCCCccccceeccccccc
Q 009313 280 NYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVYQEEDEQGF 359 (537)
Q Consensus 280 ~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~t~~~sd~~~~~~v~~~~d~~G~ 359 (537)
++||||++|.+|+ +.+++||. ++.+|||||+|+||++.+.+. +++++.+++|+..+++++.+......
T Consensus 133 k~vLVVg~e~~S~-~ld~~dR~---t~vlFgDGAgAvvl~~~~~~~--------~i~~~~l~sdg~~~~~l~~~~~~~~~ 200 (323)
T COG0332 133 KNVLVVGAETLSR-ILDWTDRD---TCVLFGDGAGAVVLEATEDDN--------GILDTDLGSDGSQGDLLYLPGGGSAT 200 (323)
T ss_pred CEEEEEehhHhhc-cCCHhhcc---ceEEEcCCceEEEEecCCCCc--------CeeeeeeeccccCCCeeeccCCCCcc
Confidence 9999999999998 67889997 688999999999999987331 57778899999998887765432110
Q ss_pred cccccchhhhhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhccccc-----ccCCCCCCcCccccccE
Q 009313 360 RGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSS-----LASTKPYIPDYKLAFEH 434 (537)
Q Consensus 360 ~g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~-----~~gl~~y~pdf~~did~ 434 (537)
.+. ..... ++.|.++++|+.++..+++.+ .+++++ +||||
T Consensus 201 -----~~~------~~~~~------------------~~~m~Gr~vfk~av~~~~~~~~~~L~~~~l~~------~dId~ 245 (323)
T COG0332 201 -----PKE------ESGGG------------------LLVMDGREVFKFAVRAMPKAIEEVLEKAGLTP------EDIDW 245 (323)
T ss_pred -----ccc------ccccc------------------ceeeccHHHHHHHHHHHHHHHHHHHHHcCCCH------HHCCE
Confidence 000 00001 223445666666666555554 378887 99999
Q ss_pred EEEcCCCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEchHHHhhheeEEE
Q 009313 435 FCVHAASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCNSVVWQA 514 (537)
Q Consensus 435 ~~~H~~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~ 514 (537)
|++||+|.++++.++++|+++++++ ..++++|||||+||+|+.|+++.++|++++||+|++.+||+|++|+++++||
T Consensus 246 ~vpHQan~ri~~~i~~~l~~~~~k~---~~~~~~yGNtsaAsiplaL~~~~~~g~ik~Gd~ill~~fG~Gltwg~~~~r~ 322 (323)
T COG0332 246 FVPHQANLRIIEAIAKKLGIPEEKV---VVTVDKYGNTSAASIPLALDEALREGRIKPGDLVLLEAFGGGLTWGAALVRW 322 (323)
T ss_pred EccccccHHHHHHHHHHcCCCHHHH---hhHHHHhcccccchHHHHHHHHhhhCCCCCCCEEEEEeecCcceeeeEEEEe
Confidence 9999999999999999999999999 5899999999999999999999999999999999999999999999999998
Q ss_pred e
Q 009313 515 M 515 (537)
Q Consensus 515 ~ 515 (537)
.
T Consensus 323 ~ 323 (323)
T COG0332 323 G 323 (323)
T ss_pred C
Confidence 4
No 8
>PLN03172 chalcone synthase family protein; Provisional
Probab=100.00 E-value=1.1e-50 Score=430.10 Aligned_cols=350 Identities=15% Similarity=0.192 Sum_probs=273.1
Q ss_pred CceEEEEEeEEeCCCCcccCHHHHHHHHhccCCC-ChhhHHH-HHHHHHHcCCceeEEccCC----ccc------ccccc
Q 009313 121 RSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKS-DEASLDF-QRRIMKSSGIGDETYIPKV----VMS------AEENC 188 (537)
Q Consensus 121 ~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~-~~~~~~f-~~~i~~~sGI~~r~~~~~~----~~~------~p~~~ 188 (537)
.+++|.++|+..|+ +.++++++.+.+.+.... +...++. +.+|++++||++|+..-+. .+. .|...
T Consensus 15 ~~~~I~~igta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 92 (393)
T PLN03172 15 GPATILAIGKATPA--NCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLD 92 (393)
T ss_pred CCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccCCCCHH
Confidence 46899999999999 999999999987643211 1122332 5789999999999875321 110 12224
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeE-EEecCccchHHHHHH
Q 009313 189 MTMKHGRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIIS-YNLGGMGCSAGVIGV 267 (537)
Q Consensus 189 ~~ma~~~~ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~-~~l~g~gCs~gl~AL 267 (537)
..+..+.+++.+|+.+|+++||+++|++++|||+||++|++....|+++.+|+++||+++++.+ ++++ +||+|++.||
T Consensus 93 ~r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~-~gC~g~~~aL 171 (393)
T PLN03172 93 ARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQ-QGCFAGGTVL 171 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEEeeeC-CchHHHHHHH
Confidence 4677888999999999999999999999999999998876655699999999999999977766 5666 9999999999
Q ss_pred HHHHHHHHcCCCCeEEEEEecccccccCCCCCc--CCCccccccccceEEEEEeccCccc-cccceeeeeEEEEEe-ccC
Q 009313 268 DLARDMLQANPNNYAVVVSTEMVGYNWYAGRDR--SMMIPNCFFRMGCSAILMSNRRRDY-HRAKYRLQLIVRTHT-GAD 343 (537)
Q Consensus 268 ~lA~~lL~~g~~~~aLVVs~E~~S~~~~~~~dr--~~ll~~~lfgDGAAAvLLs~~~~~~-~~~~~~L~~~v~t~~-~sd 343 (537)
++|++++++++.++||||++|.+|.++++++|+ +.++++++|||||+|+||++.+... .+..|++.+..++.. .++
T Consensus 172 ~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~~~~~~~~~~i~~~~~~~~~~t~ 251 (393)
T PLN03172 172 RLAKDLAENNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKIERPLFEIVSAAQTILPDSD 251 (393)
T ss_pred HHHHHHHHcCCCCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCCCcccCceeEEeeeccEEecCCc
Confidence 999999999999999999999999766555553 4567889999999999999865421 224567766544433 344
Q ss_pred CCccccceeccccccccccccchhhhhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCC
Q 009313 344 DRSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKP 423 (537)
Q Consensus 344 ~~~~~~v~~~~d~~G~~g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~ 423 (537)
+.....+.. ++.++.+++++|..+.+.++. ..+++++. .|++.
T Consensus 252 ~~~~~~i~~-----~G~~~~l~~~vp~~~~~~i~~----------------------~~~~~L~~----------~gl~~ 294 (393)
T PLN03172 252 GAIDGHLRE-----VGLTFHLLKDVPGLISKNIEK----------------------SLVEAFAP----------IGIND 294 (393)
T ss_pred ccccceEEc-----CCcEEEEechHHHHHHHHHHH----------------------HHHHHhhh----------cCCCc
Confidence 432222221 223466778887765432111 12445554 67765
Q ss_pred CCcCccccccEEEEcCCCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHH----HcCCCCCC---CEE
Q 009313 424 YIPDYKLAFEHFCVHAASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLE----AKERVKRG---DRV 496 (537)
Q Consensus 424 y~pdf~~did~~~~H~~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~----~~g~l~~G---d~V 496 (537)
.|+++|++||+|+++++.+++.||++++++.+|++++++||||||+|+++.|+++. ++|++++| |++
T Consensus 295 ------~di~~~~~Hqgg~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~G~~~~~~ 368 (393)
T PLN03172 295 ------WNSIFWIAHPGGPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWG 368 (393)
T ss_pred ------cccceEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCCCCCCCcceE
Confidence 89999999999999999999999999999999999999999999999999999987 35788777 899
Q ss_pred EEEEEchHHHhhheeEEEec
Q 009313 497 WQIAFGSGFKCNSVVWQAMR 516 (537)
Q Consensus 497 lliafGsG~~~~s~v~r~~~ 516 (537)
++++||+||+++++++||..
T Consensus 369 ll~afGpG~t~~~~ll~~~~ 388 (393)
T PLN03172 369 VLFGFGPGLTVETVVLHSVP 388 (393)
T ss_pred EEEEeCCcceeeeeeeEecc
Confidence 99999999999999999953
No 9
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=100.00 E-value=7e-51 Score=427.92 Aligned_cols=345 Identities=38% Similarity=0.578 Sum_probs=265.4
Q ss_pred eEEEEEeEEeCCCCcccCHHHHHHHHhccCC--CChhhHHHHHHHHHHcCCceeEEccC--Ccccc------ccccchhh
Q 009313 123 VYLVDFACYRPSDDLKVTREQFIEVAGKWSK--SDEASLDFQRRIMKSSGIGDETYIPK--VVMSA------EENCMTMK 192 (537)
Q Consensus 123 v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~--~~~~~~~f~~~i~~~sGI~~r~~~~~--~~~~~------p~~~~~ma 192 (537)
+||.++++|+|+ ++++|+++.+.+..... +.+...+..++|++++||++|+++.+ .+... |......+
T Consensus 2 ~~I~~~~~~~P~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (361)
T cd00831 2 ATILAIGTAVPP--HRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDERND 79 (361)
T ss_pred cEEEEEEEeCCC--CcCCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhcCCccccCCCcCcchh
Confidence 689999999999 89999999998764211 01234556689999999999999865 32111 22345677
Q ss_pred hhhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHH
Q 009313 193 HGRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARD 272 (537)
Q Consensus 193 ~~~~ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~ 272 (537)
.+.+++.+++.+|++++|+++|++++|||+||++|++++..|+++.+|+++||+++++.+||++++||+|++.||++|++
T Consensus 80 ~~~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~ 159 (361)
T cd00831 80 IALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKD 159 (361)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHHH
Confidence 78899999999999999999999999999999998888889999999999999987899999998899999999999999
Q ss_pred HHHcCCCCeEEEEEecccccccCCCCC-cCCCccccccccceEEEEEeccCcccc--ccceeeeeEEEEEeccCCCcccc
Q 009313 273 MLQANPNNYAVVVSTEMVGYNWYAGRD-RSMMIPNCFFRMGCSAILMSNRRRDYH--RAKYRLQLIVRTHTGADDRSFRS 349 (537)
Q Consensus 273 lL~~g~~~~aLVVs~E~~S~~~~~~~d-r~~ll~~~lfgDGAAAvLLs~~~~~~~--~~~~~L~~~v~t~~~sd~~~~~~ 349 (537)
++++++.++||||++|..|. ++++.| +.+++++++|||||+|+||++++.... ...+++.+....... +. .+.
T Consensus 160 ~~~~~~~~~aLvv~~e~~s~-~~~~~d~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~p-~~--~~~ 235 (361)
T cd00831 160 LLEANPGARVLVVSTELCSL-WYRGPDHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLP-DS--EDA 235 (361)
T ss_pred HHHHCCCCEEEEEEeecccc-eeCCCCcHHHhhhhhhccCCceEEEEEcCCCcccccccceeeecccceeee-cC--CCc
Confidence 99999999999999999988 666666 776667899999999999998765321 123333322111111 10 000
Q ss_pred ceeccccccccccccchhhhhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhccccccc--CCCCCCcC
Q 009313 350 VYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLA--STKPYIPD 427 (537)
Q Consensus 350 v~~~~d~~G~~g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~--gl~~y~pd 427 (537)
.++...++ + ++ . .+++.++.+. ...+....++++++ + ++++
T Consensus 236 ----------~~~~~~~~-----~--~~--~-~~~~~v~~~~---~~~~~~~i~~~L~~----------~~~g~~~---- 278 (361)
T cd00831 236 ----------MGWHLGEE-----G--LT--F-VLSRDVPRLV---EKNLERVLRKLLAR----------LGIGLFK---- 278 (361)
T ss_pred ----------eEEEEEcc-----e--EE--E-EeChhHHHHH---HHHHHHHHHHHhcc----------ccCCCcc----
Confidence 01111000 0 00 0 1112111100 00111122344443 6 7776
Q ss_pred ccccccEEEEcCCCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEchHHHh
Q 009313 428 YKLAFEHFCVHAASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKC 507 (537)
Q Consensus 428 f~~did~~~~H~~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd~VlliafGsG~~~ 507 (537)
+|||||++||+|+++++.+++.||++++++++|+.++++||||||+|+|+.|++++++|++++||+|++++||+|++|
T Consensus 279 --~did~~~~H~~~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~ 356 (361)
T cd00831 279 --LAFDHWCVHPGGRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYMEAKGRVKRGDRGLLIAFGPGFTC 356 (361)
T ss_pred --ccceEEEECCCChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHHHHHhCCCCCCCEEEEEEEcCCcee
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hheeE
Q 009313 508 NSVVW 512 (537)
Q Consensus 508 ~s~v~ 512 (537)
++++|
T Consensus 357 ~~~l~ 361 (361)
T cd00831 357 ESAVW 361 (361)
T ss_pred eeeeC
Confidence 99987
No 10
>PLN03169 chalcone synthase family protein; Provisional
Probab=100.00 E-value=2.4e-49 Score=420.32 Aligned_cols=353 Identities=17% Similarity=0.261 Sum_probs=260.7
Q ss_pred hcCCCceEEEEEeEEeCCCCcccCHHHHHHHHhc-cCCCChhhH-HHHHHHHHHcCCceeEEccCCc----c------cc
Q 009313 117 MSRPRSVYLVDFACYRPSDDLKVTREQFIEVAGK-WSKSDEASL-DFQRRIMKSSGIGDETYIPKVV----M------SA 184 (537)
Q Consensus 117 ~~~~~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~-~~~~~~~~~-~f~~~i~~~sGI~~r~~~~~~~----~------~~ 184 (537)
.+.|.+++|.++|+|+|+ ++++|+++.+.+.. .+. +++++ +.++||++++||++|+++.+.. + ..
T Consensus 16 ~~~~~~~~I~gigt~~P~--~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~ 92 (391)
T PLN03169 16 AANPGKATILALGKAFPS--QLVPQEYLVDGYFRDTKC-DDPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGT 92 (391)
T ss_pred cCCCCCeEEEEEEeeCCC--eecCHHHHHHHHHHHhcc-cCHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCC
Confidence 456788999999999999 99999999986543 211 23332 3357899999999999874211 0 01
Q ss_pred ccccchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCe-eEEEecCccchHH
Q 009313 185 EENCMTMKHGRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNI-ISYNLGGMGCSAG 263 (537)
Q Consensus 185 p~~~~~ma~~~~ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~-~~~~l~g~gCs~g 263 (537)
|.....+..+.+.+.+|+.+|+++||+++|++++|||+||++|++++..|+++.+|+++||+++++ .++|++ +||+|+
T Consensus 93 ~~~~~r~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~d~~-~gC~g~ 171 (391)
T PLN03169 93 PTIKQRLDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYF-LGCSGG 171 (391)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCcceeeeccc-ChhHHH
Confidence 112234445678899999999999999999999999999999888999999999999999998776 479999 899999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEEecccccccCCCC-C-cCCCccccccccceEEEEEeccCccc-cccceeeeeEEEEEe
Q 009313 264 VIGVDLARDMLQANPNNYAVVVSTEMVGYNWYAGR-D-RSMMIPNCFFRMGCSAILMSNRRRDY-HRAKYRLQLIVRTHT 340 (537)
Q Consensus 264 l~AL~lA~~lL~~g~~~~aLVVs~E~~S~~~~~~~-d-r~~ll~~~lfgDGAAAvLLs~~~~~~-~~~~~~L~~~v~t~~ 340 (537)
+.||.+|++++++++.++||||++|.+|..+.... + ....+++++|||||+|+||++++... ....|++........
T Consensus 172 ~~aL~~A~~~~~~~~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~l~~~~~~~i 251 (391)
T PLN03169 172 VAGLRVAKDIAENNPGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVSESPFFELHTAIQQFL 251 (391)
T ss_pred HHHHHHHHHHHHhCCCCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCCcccCCcceEEEeeeeeEc
Confidence 99999999999999999999999999887554211 1 22234678999999999999765421 112233322111111
Q ss_pred ccCCCccccceeccccccccccccchhhhhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccC
Q 009313 341 GADDRSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLAS 420 (537)
Q Consensus 341 ~sd~~~~~~v~~~~d~~G~~g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~g 420 (537)
. ++. +.+-.....+| ..+.+++++++.+.+ .+....++++++ +|
T Consensus 252 p-~~~--~~~~~~~~~~g-~~~~~g~~v~~~~~~----------------------~~~~~i~~~L~~----------~g 295 (391)
T PLN03169 252 P-GTE--KTIDGRLTEEG-INFKLGRELPQKIED----------------------NIEGFCKKLMKK----------AG 295 (391)
T ss_pred C-CCc--cccCceecCCc-eEEEECcHHHHHHHH----------------------HHHHHHHHHHHH----------cC
Confidence 1 100 00000000111 112233333322111 111123455554 78
Q ss_pred CCCCCcCcccccc--EEEEcCCCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCC---CCCE
Q 009313 421 TKPYIPDYKLAFE--HFCVHAASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVK---RGDR 495 (537)
Q Consensus 421 l~~y~pdf~~did--~~~~H~~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~---~Gd~ 495 (537)
+++ +|+| +|++||+|+++++.+++.||++++++.+|++++++||||||+|+|+.|++++++++++ +||+
T Consensus 296 l~~------~did~~~~v~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~~~~~~~~~~~~gd~ 369 (391)
T PLN03169 296 LVE------KDYNDLFWAVHPGGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMREELKKKGEEDEEW 369 (391)
T ss_pred CCC------CCCCcceEEecCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHHHHhhcccCCCCCcE
Confidence 875 7788 9999999999999999999999999998999999999999999999999999888876 6999
Q ss_pred EEEEEEchHHHhhheeEEEe
Q 009313 496 VWQIAFGSGFKCNSVVWQAM 515 (537)
Q Consensus 496 VlliafGsG~~~~s~v~r~~ 515 (537)
+++++||+||+|+++++||.
T Consensus 370 ~ll~afG~G~s~~~~ll~~~ 389 (391)
T PLN03169 370 GLILAFGPGITFEGILARNL 389 (391)
T ss_pred EEEEEEcccHhHHHHHHhhh
Confidence 99999999999999999984
No 11
>PLN03173 chalcone synthase; Provisional
Probab=100.00 E-value=2.1e-49 Score=420.05 Aligned_cols=351 Identities=16% Similarity=0.185 Sum_probs=269.7
Q ss_pred CceEEEEEeEEeCCCCcccCHHHHHHHHhccCC--CChhhHHHHHHHHHHcCCceeEEccCCc----c---c---ccccc
Q 009313 121 RSVYLVDFACYRPSDDLKVTREQFIEVAGKWSK--SDEASLDFQRRIMKSSGIGDETYIPKVV----M---S---AEENC 188 (537)
Q Consensus 121 ~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~--~~~~~~~f~~~i~~~sGI~~r~~~~~~~----~---~---~p~~~ 188 (537)
.+++|.++|+..|+ +.++++++.+.+..... -.+...+.+++|++++||+.|+..-+.+ + . .|...
T Consensus 15 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 92 (391)
T PLN03173 15 GPATIMAIGTSTPP--NCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSLD 92 (391)
T ss_pred CCeEEEEEEccCCC--cccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCHH
Confidence 46899999999999 89999999998865321 0122233367899999999998653211 1 0 12224
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeE-EEecCccchHHHHHH
Q 009313 189 MTMKHGRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIIS-YNLGGMGCSAGVIGV 267 (537)
Q Consensus 189 ~~ma~~~~ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~-~~l~g~gCs~gl~AL 267 (537)
..+..+.+++.+|+.+|+++||+++|++++|||+||++|++....|+++.+|+++||+++++.. ++++ +||+|++.||
T Consensus 93 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~-~gC~g~~~aL 171 (391)
T PLN03173 93 ARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQ-QGCFAGGTVL 171 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCccceeeehhc-CccHHHHHHH
Confidence 4677888999999999999999999999999999998876655589999999999999977754 5556 9999999999
Q ss_pred HHHHHHHHcCCCCeEEEEEecccccccCCCCCc--CCCccccccccceEEEEEeccCccc-cccceeeeeEEEEEe-ccC
Q 009313 268 DLARDMLQANPNNYAVVVSTEMVGYNWYAGRDR--SMMIPNCFFRMGCSAILMSNRRRDY-HRAKYRLQLIVRTHT-GAD 343 (537)
Q Consensus 268 ~lA~~lL~~g~~~~aLVVs~E~~S~~~~~~~dr--~~ll~~~lfgDGAAAvLLs~~~~~~-~~~~~~L~~~v~t~~-~sd 343 (537)
++|++++++++.++||||++|.+|.+|++++|+ +.++++++|||||+|+||++.+... ....|++.+..++.. .++
T Consensus 172 ~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~~~~~~~~~~l~~~~~~~~~~t~ 251 (391)
T PLN03173 172 RLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGVEKPLFELVSAAQTILPDSD 251 (391)
T ss_pred HHHHHHHHhCCCCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCCCCcCCcceEEEeeeeEEecCCc
Confidence 999999999999999999999999767655553 3556789999999999999754321 123466655443333 344
Q ss_pred CCccccceeccccccccccccchhhhhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCC
Q 009313 344 DRSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKP 423 (537)
Q Consensus 344 ~~~~~~v~~~~d~~G~~g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~ 423 (537)
+.....+ . ..| .++.+++++|+.+.+. +....++++++ .|++.
T Consensus 252 ~~~~~~i-~---~~G-~~~~l~~~vp~~~~~~----------------------~~~~i~~~L~~----------~gl~~ 294 (391)
T PLN03173 252 GAIDGHL-R---EVG-LTFHLLKDVPGLISKN----------------------VEKSLTEAFKP----------LGISD 294 (391)
T ss_pred cceeeEE-E---cCc-eEEEEecHHHHHHHHH----------------------HHHHHHHHHHh----------cCCCc
Confidence 3321111 1 112 3456667777654321 11123556654 77775
Q ss_pred CCcCccccccEEEEcCCCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHc----CCCCCC---CEE
Q 009313 424 YIPDYKLAFEHFCVHAASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAK----ERVKRG---DRV 496 (537)
Q Consensus 424 y~pdf~~did~~~~H~~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~----g~l~~G---d~V 496 (537)
.|+|+|++||+|+++++.+++.|||+++++.+|++++++||||||+|+|+.|++++++ |.+++| +++
T Consensus 295 ------~di~~~v~Hqgg~~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~~~~~~g~~~~~~ 368 (391)
T PLN03173 295 ------WNSLFWIAHPGGPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWG 368 (391)
T ss_pred ------cccCeEEECCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHHHHHhhhhcCCCCCCCCcceE
Confidence 8999999999999999999999999999999999999999999999999999999963 444433 889
Q ss_pred EEEEEchHHHhhheeEEEecc
Q 009313 497 WQIAFGSGFKCNSVVWQAMRR 517 (537)
Q Consensus 497 lliafGsG~~~~s~v~r~~~~ 517 (537)
+++|||+||+++++++||..|
T Consensus 369 l~~afGpG~t~e~~ll~~~~~ 389 (391)
T PLN03173 369 VLFGFGPGLTVETVVLHSVAP 389 (391)
T ss_pred EEEEeCchHHHHHHHHhhccC
Confidence 999999999999999998653
No 12
>PLN03168 chalcone synthase; Provisional
Probab=100.00 E-value=7.1e-49 Score=416.21 Aligned_cols=350 Identities=16% Similarity=0.221 Sum_probs=259.2
Q ss_pred CceEEEEEeEEeCCCCcccCHHHHHHHHhccCC--CChhhHHHHHHHHHHcCCceeEEccCCc----cc------ccccc
Q 009313 121 RSVYLVDFACYRPSDDLKVTREQFIEVAGKWSK--SDEASLDFQRRIMKSSGIGDETYIPKVV----MS------AEENC 188 (537)
Q Consensus 121 ~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~--~~~~~~~f~~~i~~~sGI~~r~~~~~~~----~~------~p~~~ 188 (537)
.+++|.++|+..|+ +.++++++.+.+.+... -.++..+.+++|++++||+.|+..-+.+ +. .|...
T Consensus 14 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ps~~ 91 (389)
T PLN03168 14 GPACVLGIGTAVPP--AEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYMEPSLN 91 (389)
T ss_pred CCeEEEEEeccCCC--cccCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccCCCHH
Confidence 46899999999999 89999999998865321 0122233357899999999998643211 10 11124
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCe-eEEEecCccchHHHHHH
Q 009313 189 MTMKHGRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNI-ISYNLGGMGCSAGVIGV 267 (537)
Q Consensus 189 ~~ma~~~~ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~-~~~~l~g~gCs~gl~AL 267 (537)
..++.+.+++.+|+.+|+++||+++|++++|||+||++|++.+..|+++.+|+++||+++++ ++++++ +||+||+.||
T Consensus 92 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~g~~~aL 170 (389)
T PLN03168 92 VRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMMYQ-TGCFGGASVL 170 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeeeeeC-CccHHHHHHH
Confidence 46778889999999999999999999999999999999766667999999999999999765 489999 8999999999
Q ss_pred HHHHHHHHcCCCCeEEEEEecccccccCCCC--CcCCCccccccccceEEEEEeccCccc-cccceeeeeEEEEEec-cC
Q 009313 268 DLARDMLQANPNNYAVVVSTEMVGYNWYAGR--DRSMMIPNCFFRMGCSAILMSNRRRDY-HRAKYRLQLIVRTHTG-AD 343 (537)
Q Consensus 268 ~lA~~lL~~g~~~~aLVVs~E~~S~~~~~~~--dr~~ll~~~lfgDGAAAvLLs~~~~~~-~~~~~~L~~~v~t~~~-sd 343 (537)
++|++++++++.++||||++|.+|.+|.... +.+.++++++|||||+|+||++.+... .+..+++....++... ++
T Consensus 171 ~~A~~~i~~~~~~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~~~~~~~~~~~~~~~~~~~p~s~ 250 (389)
T PLN03168 171 RVAKDLAENNKGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEVEKALFEVHWAGETILPESD 250 (389)
T ss_pred HHHHHHHHhCCCCEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCCCccCCcceEEEeeeeEEEcCCC
Confidence 9999999999999999999999998664322 234456789999999999999865321 1122343322222221 22
Q ss_pred CCccccceeccccccccccccchhhhhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCC
Q 009313 344 DRSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKP 423 (537)
Q Consensus 344 ~~~~~~v~~~~d~~G~~g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~ 423 (537)
+. +...-++.| ..+.+++++|....+. + ....++.++. .++..
T Consensus 251 ~~----~~~~~~~~g-~~~~l~~~vp~~i~~~----~------------------~~~l~~~l~~----------~~~~~ 293 (389)
T PLN03168 251 GA----IDGHLTEAG-LIFHLMKDVPGLISKN----I------------------EKFLNEARKC----------VGSPD 293 (389)
T ss_pred Cc----cCceEecCc-eEEEECHHHHHHHHHH----H------------------HHHHHHHHHh----------cCCCc
Confidence 11 000001111 2234444444432211 1 0111233332 44443
Q ss_pred CCcCccccccEEEEcCCCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCC--------CE
Q 009313 424 YIPDYKLAFEHFCVHAASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRG--------DR 495 (537)
Q Consensus 424 y~pdf~~did~~~~H~~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~G--------d~ 495 (537)
.|+++|++||+|++|++.+++.|||+++++..|+.++++||||||+|+++.|+++.++ ++++| |+
T Consensus 294 ------~d~~~~v~Hqgg~~Il~~v~~~Lgl~~ek~~~s~~vl~~yGNtSSaSv~~vL~~~~~~-~~~~g~~~~~~g~~~ 366 (389)
T PLN03168 294 ------WNEMFWAVHPGGPAILDQVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQIRQR-SVKMGASTLGEGSEF 366 (389)
T ss_pred ------cccceEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHhhhHHHHHHHHHHH-HhhcCCCCCCCCccE
Confidence 5778999999999999999999999999999999999999999999999999998865 55554 89
Q ss_pred EEEEEEchHHHhhheeEEEecc
Q 009313 496 VWQIAFGSGFKCNSVVWQAMRR 517 (537)
Q Consensus 496 VlliafGsG~~~~s~v~r~~~~ 517 (537)
++++|||+||+|+++++||..+
T Consensus 367 ~ll~afGpG~t~~~~llr~~~~ 388 (389)
T PLN03168 367 GFFIGFGPGLTLEVLVLRAAAN 388 (389)
T ss_pred EEEEEEcchhhhhhhhheeccc
Confidence 9999999999999999999654
No 13
>PLN03171 chalcone synthase-like protein; Provisional
Probab=100.00 E-value=3.7e-48 Score=412.09 Aligned_cols=354 Identities=17% Similarity=0.197 Sum_probs=259.1
Q ss_pred CCceEEEEEeEEeCCCCcccCHHHHHHHHhcc---CCCChhhHHHHHHHHHHcCCceeEEccCCc----------ccccc
Q 009313 120 PRSVYLVDFACYRPSDDLKVTREQFIEVAGKW---SKSDEASLDFQRRIMKSSGIGDETYIPKVV----------MSAEE 186 (537)
Q Consensus 120 ~~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~---~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~----------~~~p~ 186 (537)
+.+++|.++|+|+|+ ++++|+++.+++... ..+. +..+.+++|++++||++||++.+++ ...|.
T Consensus 20 ~~~~~I~gigt~~P~--~~v~n~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~ 96 (399)
T PLN03171 20 DGLAAVLAIGTANPA--NCVPQDEFPDFYFRATKSDHLT-ALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHDAPS 96 (399)
T ss_pred CCCcEEEEEEeeCCC--cccCHHHHHHHHHHHhcccccH-HHHHHHHHHHHhcCCCceeEeccccccccCccccccCCCC
Confidence 367999999999999 999999999885321 1111 1122357899999999999986542 01122
Q ss_pred ccchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCee-EEEecCccchHHHH
Q 009313 187 NCMTMKHGRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNII-SYNLGGMGCSAGVI 265 (537)
Q Consensus 187 ~~~~ma~~~~ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~-~~~l~g~gCs~gl~ 265 (537)
....+..+.+.+.+|+.+|++++|+++|++++|||+||++|++....|+++.+|+++||+++++. .+++. +||+|++.
T Consensus 97 ~~~r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~-~gC~g~~~ 175 (399)
T PLN03171 97 LDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRTMLHL-NGCFAGAA 175 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccceeeccC-CccHHHHH
Confidence 34567778889999999999999999999999999999987654458999999999999986553 56666 79999999
Q ss_pred HHHHHHHHHHcCCCCeEEEEEecccccccCCCCCcC---CCccccccccceEEEEEeccCccccccceeeeeEEEEEecc
Q 009313 266 GVDLARDMLQANPNNYAVVVSTEMVGYNWYAGRDRS---MMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGA 342 (537)
Q Consensus 266 AL~lA~~lL~~g~~~~aLVVs~E~~S~~~~~~~dr~---~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~t~~~s 342 (537)
||++|.+++++++.++||||++|.+|.. +++.|++ .++++++|||||+|+||++.++...+..|++..... ..
T Consensus 176 aL~~A~~li~~~~~~~vLVv~~e~~s~~-~~~~d~~~~~~~v~~~LFGDGAaA~vl~~~~~~~~~~~~~l~~~~~---~~ 251 (399)
T PLN03171 176 ALRLAKDLAENNRGARVLVVAAEITLLL-FNGPDEGCFQTLLNQGLFGDGAAAVIVGADADAAERPLFEIVSAAQ---AI 251 (399)
T ss_pred HHHHHHHHHHhCCCCeEEEEEEeccccc-cCCCCcccHHhhhccccccCccEEEEEecCCCCCCCCceEEEEeee---EE
Confidence 9999999999999999999999999984 4444443 345578999999999999865432123455544322 22
Q ss_pred CCCccccceeccccccccccccc-hhhhhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCC
Q 009313 343 DDRSFRSVYQEEDEQGFRGLKVS-KNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLAST 421 (537)
Q Consensus 343 d~~~~~~v~~~~d~~G~~g~~ls-~dl~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl 421 (537)
+++..+.+.+..++ +..-..++ +++|....+. .+++++.++...+. ...++
T Consensus 252 ~p~~~~~~~~~~~~-~g~~~~~~~~~vp~~i~~~--------------------------l~~~l~~~l~~~~~-~~~g~ 303 (399)
T PLN03171 252 IPESDDAINMHFTE-GGLDGNIGTRQVPGLIGDN--------------------------IERCLLDAFAPLLG-GDGGA 303 (399)
T ss_pred ecCCchheEEEEEc-CCceEEECchhHHHHHHHH--------------------------HHHHHHHHHHhhcc-cccCC
Confidence 33333333321111 11111222 3333222111 12233221111000 01345
Q ss_pred CCCCcCccccccEEEEcCCCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCC--CCCC---CEE
Q 009313 422 KPYIPDYKLAFEHFCVHAASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKER--VKRG---DRV 496 (537)
Q Consensus 422 ~~y~pdf~~did~~~~H~~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~--l~~G---d~V 496 (537)
++ +|++|+ +||+|+++++.+++.||++++++..|+.++++||||||+|+|+.|+++.++++ +++| |+|
T Consensus 304 ~~------~di~~~-~Hq~~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtssaSip~~L~~~~~~~~~~~~~G~~~d~v 376 (399)
T PLN03171 304 EW------NDLFWA-VHPGSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALDELRRQMEEAAAAGAWPELG 376 (399)
T ss_pred Cc------ccceEE-EcCCcHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchhhhHHHHHHHHHhhHhhcCCCCCCcceE
Confidence 44 788766 69999999999999999999999999999999999999999999999988764 6788 999
Q ss_pred EEEEEchHHHhhheeEEEec
Q 009313 497 WQIAFGSGFKCNSVVWQAMR 516 (537)
Q Consensus 497 lliafGsG~~~~s~v~r~~~ 516 (537)
+++|||+||+|++++|++.+
T Consensus 377 ll~~fG~Glt~~~~ll~~~~ 396 (399)
T PLN03171 377 VMMAFGPGLTVDAMLLHASG 396 (399)
T ss_pred EEEEEcccHHHHHHHhhccc
Confidence 99999999999999999976
No 14
>PLN03170 chalcone synthase; Provisional
Probab=100.00 E-value=2.7e-48 Score=413.02 Aligned_cols=351 Identities=16% Similarity=0.206 Sum_probs=266.3
Q ss_pred CceEEEEEeEEeCCCCcccCHHHHHHHHhccCCC-ChhhHH-HHHHHHHHcCCceeEEccCCc----cc------ccccc
Q 009313 121 RSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKS-DEASLD-FQRRIMKSSGIGDETYIPKVV----MS------AEENC 188 (537)
Q Consensus 121 ~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~-~~~~~~-f~~~i~~~sGI~~r~~~~~~~----~~------~p~~~ 188 (537)
.+.+|.++|+..|+ +.++++++.+.+.+.... +....+ .+++|++++||+.|+..-+++ .. .|...
T Consensus 19 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 96 (401)
T PLN03170 19 GPATVLAIGTATPA--NCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLD 96 (401)
T ss_pred CCeEEEEEeecCCC--ccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHH
Confidence 45899999999999 899999999988763211 112233 367899999999998754211 10 12124
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCe-eEEEecCccchHHHHHH
Q 009313 189 MTMKHGRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNI-ISYNLGGMGCSAGVIGV 267 (537)
Q Consensus 189 ~~ma~~~~ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~-~~~~l~g~gCs~gl~AL 267 (537)
..+..+.+++.+|+.+|+++||+++|++++|||+||++|++....|+++.+|+++||+++++ .+++++ +||+|++.||
T Consensus 97 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~G~~~aL 175 (401)
T PLN03170 97 ARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQ-QGCFAGGTVL 175 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHHHHhhc-ChhHHHHHHH
Confidence 46778889999999999999999999999999999988766656999999999999999765 478999 8999999999
Q ss_pred HHHHHHHHcCCCCeEEEEEecccccccCCCCC--cCCCccccccccceEEEEEeccCccc-cccceeeeeEEEEEeccCC
Q 009313 268 DLARDMLQANPNNYAVVVSTEMVGYNWYAGRD--RSMMIPNCFFRMGCSAILMSNRRRDY-HRAKYRLQLIVRTHTGADD 344 (537)
Q Consensus 268 ~lA~~lL~~g~~~~aLVVs~E~~S~~~~~~~d--r~~ll~~~lfgDGAAAvLLs~~~~~~-~~~~~~L~~~v~t~~~sd~ 344 (537)
++|++++++++.++||||++|.+|.++.++++ .+.++++++|||||+|+||++.+... ....|++........ .+.
T Consensus 176 ~~A~~l~~~~~~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~~~~~~~~~~l~~~~~~~~-p~~ 254 (401)
T PLN03170 176 RVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSASQTIL-PDS 254 (401)
T ss_pred HHHHHHHHcCCCCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCcccccCCceEEeeccceEe-cCC
Confidence 99999999999999999999999986644432 23455788999999999999865421 112345443221111 111
Q ss_pred CccccceeccccccccccccchhhhhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCC
Q 009313 345 RSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPY 424 (537)
Q Consensus 345 ~~~~~v~~~~d~~G~~g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y 424 (537)
+.+ +...-.+.| ..+.+++++|..+.+. +....++++++ +|++.
T Consensus 255 ~~~--~~~~i~~~G-~~~~l~~~vp~~~~~~----------------------i~~~v~~~L~~----------~gl~~- 298 (401)
T PLN03170 255 EGA--IDGHLREVG-LTFHLLKDVPGLISKN----------------------IERSLEEAFKP----------LGITD- 298 (401)
T ss_pred ccc--ccceEEcCC-eEEEEehHHHHHHHHH----------------------HHHHHHHHHHh----------cCCCc-
Confidence 111 100001112 2344556666543321 11123455554 77775
Q ss_pred CcCccccccEEEEcCCCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHH----HcCCCCCC---CEEE
Q 009313 425 IPDYKLAFEHFCVHAASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLE----AKERVKRG---DRVW 497 (537)
Q Consensus 425 ~pdf~~did~~~~H~~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~----~~g~l~~G---d~Vl 497 (537)
.|+++|++||+|+++++.+++.||++++++.+|++++++||||||+|+++.|+++. ++|++++| |+++
T Consensus 299 -----~di~~~v~Hqgg~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~G~~~~~~l 373 (401)
T PLN03170 299 -----YNSIFWVAHPGGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGV 373 (401)
T ss_pred -----cccCeEEecCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCCCCCccEEE
Confidence 88999999999999999999999999999999999999999999999999999987 46888888 8999
Q ss_pred EEEEchHHHhhheeEEEec
Q 009313 498 QIAFGSGFKCNSVVWQAMR 516 (537)
Q Consensus 498 liafGsG~~~~s~v~r~~~ 516 (537)
+++||+||+|+++++||..
T Consensus 374 l~afGpG~t~~~~ll~~~~ 392 (401)
T PLN03170 374 LFGFGPGLTVETVVLHSVP 392 (401)
T ss_pred EEEeCchHhHHhHHheecc
Confidence 9999999999999999954
No 15
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=8.4e-47 Score=391.30 Aligned_cols=323 Identities=15% Similarity=0.237 Sum_probs=249.3
Q ss_pred CceEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeEEccCCccccccccchhhhhhhhHHH
Q 009313 121 RSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASM 200 (537)
Q Consensus 121 ~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~p~~~~~ma~~~~ea~~ 200 (537)
.+++|.++++|+|+ ++++++++.+..+. ++ +++.+++||++|+++++++ ...+|
T Consensus 2 ~~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~------~~i~~~~Gi~~r~~~~~~e-----~~~~l--------- 55 (326)
T PRK05963 2 CSSRIAGFGHAVPD--RRVENAEIEAQLGL----ET------GWIERRTGIRCRRWAAPDE-----TLSDL--------- 55 (326)
T ss_pred CccEEEEEEEECCC--CeecHHHHHHHcCC----CH------HHhhhccCCeEEEEcCCCC-----CHHHH---------
Confidence 36899999999999 99999999987642 33 3688999999999987664 34566
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCC
Q 009313 201 VMFGALDELFEKTKVRPKDVGILVVNC-SIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPN 279 (537)
Q Consensus 201 l~~~Aa~~aL~~agi~~~dId~LI~~s-s~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~ 279 (537)
+.+|+++||+++|++++|||+||++| ++++..|+.+.+|+++||++ ++.+||++ .+|+|++.||++|.++|+++ .
T Consensus 56 -a~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~-~~~~~di~-~~C~g~~~aL~~A~~~l~~~-~ 131 (326)
T PRK05963 56 -AASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQ-NSGAIDLA-GACAGFLYALVLADGFVRAQ-G 131 (326)
T ss_pred -HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCC-CCceeecc-chhhHHHHHHHHHHHHHHcC-C
Confidence 59999999999999999999999986 46889999999999999998 68999999 59999999999999999987 4
Q ss_pred CeEEEEEecccccccCCCCCcCCCccccccccceEEEEEeccCccccccceeeeeEEEEEeccCCCccccceeccccccc
Q 009313 280 NYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVYQEEDEQGF 359 (537)
Q Consensus 280 ~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~t~~~sd~~~~~~v~~~~d~~G~ 359 (537)
++||||++|..+. +.++.++. +..+|||||+|+||++++... . +++.+...++++.|+.+..+.++.
T Consensus 132 ~~aLVv~~d~~s~-~~~~~~~~---~~~lfGDgA~A~ll~~~~~~~----~---~~l~~~~~t~~~~~~~~~~~~gg~-- 198 (326)
T PRK05963 132 KPVLVVAANILSR-RINMAERA---SAVLFADAAGAVVLAPSAKAN----S---GVLGSQLISDGSHYDLIKIPAGGS-- 198 (326)
T ss_pred CeEEEEEechhhc-cCCccccC---ceEEEeecceEEEEEecCCCC----C---ceEEEEEEEcCCCCCeEEeCCCCc--
Confidence 8999999999887 44555554 468999999999999866421 1 244455667777777555443211
Q ss_pred cccccchhhhhhhccccccccc-ccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccEEEEc
Q 009313 360 RGLKVSKNIMEIGGDALKTNIT-TLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVH 438 (537)
Q Consensus 360 ~g~~ls~dl~~~~g~~lk~ni~-~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H 438 (537)
..+.+.+.. .+. ..+. ..|+.++. +... .+....++++++ +|+++ +|||+|++|
T Consensus 199 -~~~~~~~~~---~~~--~~~~~~~~~~~~~--~~~~-~~~~~~~~~L~~----------~gl~~------~did~~~~h 253 (326)
T PRK05963 199 -ARPFAPERD---ASE--FLMTMQDGRAVFT--EAVR-MMSGASQNVLAS----------AAMTP------QDIDRFFPH 253 (326)
T ss_pred -CCCCccccc---ccc--cceEecCCHHHHH--HHHH-HHHHHHHHHHHH----------cCCCH------HHCCEEEeC
Confidence 011111100 000 0010 01221110 0000 111112333433 88987 999999999
Q ss_pred CCCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEchHHHhhheeEEE
Q 009313 439 AASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCNSVVWQA 514 (537)
Q Consensus 439 ~~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~ 514 (537)
|+|+++++.+.+.||++++++ ..++++||||+|+|+++.|+++++++++++||+|++++||+|++|+++|+||
T Consensus 254 ~~~~~~~~~~~~~l~l~~~k~---~~~l~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~~~~~~ll~~ 326 (326)
T PRK05963 254 QANARIVDKVCETIGIPRAKA---ASTLETYGNSSAATIPLSLSLANLEQPLREGERLLFAAAGAGMTGGAVVMRV 326 (326)
T ss_pred CCCHHHHHHHHHHcCCCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEehhhhheeeEEeC
Confidence 999999999999999999999 5899999999999999999999999999999999999999999999999986
No 16
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=100.00 E-value=1.6e-46 Score=397.68 Aligned_cols=332 Identities=17% Similarity=0.245 Sum_probs=246.5
Q ss_pred CceEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeEEccCCccccccccchhhhhhhhHHH
Q 009313 121 RSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASM 200 (537)
Q Consensus 121 ~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~p~~~~~ma~~~~ea~~ 200 (537)
++++|+++|+|+|+ ++++|+++.+.++. ++ .+|.+++||++|+++.+++ +..+|
T Consensus 46 ~~~~I~g~g~~lP~--~~v~n~el~~~~~~----~~------~~i~~~tGi~~R~~~~~~~-----~~~~L--------- 99 (379)
T PLN02326 46 SGSKLVGCGSAVPK--LLITNDDLSKLVDT----SD------EWIATRTGIRNRRVLSGDE-----TLTSL--------- 99 (379)
T ss_pred CCcEEEEEEEECCC--ceecHHHHHHhcCC----ch------hheecccCcceEeecCCCC-----CHHHH---------
Confidence 46899999999999 99999999887642 33 3688999999999886554 23455
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCCC
Q 009313 201 VMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNN 280 (537)
Q Consensus 201 l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~ 280 (537)
+.+|+++||+++|++++|||.||++|+.....++.+..|+++||++ +++++|++ ++|+|++.||++|.++|+++..+
T Consensus 100 -a~~Aa~~aL~~agi~~~dId~li~~s~~~~~~~~~a~~v~~~LG~~-~~~~~dv~-~~Ca~~~~aL~~A~~~l~~g~~~ 176 (379)
T PLN02326 100 -AVEAAKKALEMAGVDPEDVDLVLLCTSSPDDLFGSAPQVQAALGCT-NALAFDLT-AACSGFVLGLVTAARFIRGGGYK 176 (379)
T ss_pred -HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCccCcHHHHHHHHhCCC-CCceeecc-ccchHHHHHHHHHHHHHHcCCCC
Confidence 5999999999999999999999998764333456788999999998 79999999 79999999999999999999999
Q ss_pred eEEEEEecccccccCCCCCcCCCccccccccceEEEEEeccCccccccceeeeeEEEEEeccCCCccccceecccccccc
Q 009313 281 YAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVYQEEDEQGFR 360 (537)
Q Consensus 281 ~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~t~~~sd~~~~~~v~~~~d~~G~~ 360 (537)
+||||++|.+|. +.+++|+. +..+|||||+|+||++++... . .+..+...+++..++.+..+..+....
T Consensus 177 ~vLVv~~e~~s~-~~~~~d~~---~~~lfGDGAaAvlL~~~~~~~----~---~i~~~~~~t~g~~~~~~~~~~~g~~~~ 245 (379)
T PLN02326 177 NVLVIGADALSR-YVDWTDRG---TCILFGDGAGAVVLQACDDDE----D---GLLGFDMHSDGNGHKHLHATFKGEDDD 245 (379)
T ss_pred EEEEEEechhcC-CCCccccC---ceEEEcceeEEEEEEEcCCCC----C---ceEEEEEEEcCCCCCeEEecCCCCccc
Confidence 999999999887 55666765 356999999999999875431 1 123344566666555443321110000
Q ss_pred c-cccchhhhhhh-cccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccEEEEc
Q 009313 361 G-LKVSKNIMEIG-GDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVH 438 (537)
Q Consensus 361 g-~~ls~dl~~~~-g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H 438 (537)
+ ..-..+..... ...-..++...|+.++.+.. . .+....++++++ +|+++ +|||||++|
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~--~-~~~~~i~~~L~~----------~gl~~------~dId~~v~H 306 (379)
T PLN02326 246 SSGGNTNGVGDFPPKKASYSCIQMNGKEVFKFAV--R-CVPQVIESALQK----------AGLTA------ESIDWLLLH 306 (379)
T ss_pred ccccccccccccccccccccceEecCHHHHHHHH--H-HHHHHHHHHHHH----------cCCCH------HHCCEEEEC
Confidence 0 00000000000 00000123333332211000 0 011112333332 78886 999999999
Q ss_pred CCCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEchHHHhhheeEEE
Q 009313 439 AASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCNSVVWQA 514 (537)
Q Consensus 439 ~~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~ 514 (537)
|+|+++++.+++.||++++++ ..++++||||+|||+|+.|++++++|++++||+|++++||+||+|+++||+|
T Consensus 307 q~n~~~~~~~~~~Lgl~~ek~---~~~l~~~GNt~sAsi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~ll~~ 379 (379)
T PLN02326 307 QANQRIIDAVAQRLGIPPEKV---ISNLANYGNTSAASIPLALDEAVRSGKVKKGDVIATAGFGAGLTWGSAIVRW 379 (379)
T ss_pred CCCHHHHHHHHHHcCCCHHHe---eecHhhcCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEChhheeeEEEEEC
Confidence 999999999999999999999 5789999999999999999999999999999999999999999999999986
No 17
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=2.5e-46 Score=392.48 Aligned_cols=334 Identities=14% Similarity=0.211 Sum_probs=246.9
Q ss_pred CCCceEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeEEccCCccccccccchhhhhhhhH
Q 009313 119 RPRSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEA 198 (537)
Q Consensus 119 ~~~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~p~~~~~ma~~~~ea 198 (537)
|-++++|.+++.|+|+ ++++++++.+..-. ++.. ..+++.+++||.+|+++.+++ ...+|
T Consensus 4 ~~~~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~~~--~~~~i~~~~Gi~~R~~~~~~e-----~~~~l------- 63 (353)
T PRK12880 4 RFDKAKISGICVSVPE--HKICIDDELESVFS----NDIK--TLKRMKKVIGLNTRYICDENT-----CVSDL------- 63 (353)
T ss_pred cccccEEEEEEEECCC--eEecHHHHHHHhcC----cchh--hhhhhhhccCceEEEeCCCCC-----CHHHH-------
Confidence 4567999999999999 99999975443211 1211 235788999999999987654 23455
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcC
Q 009313 199 SMVMFGALDELFEKTKVRPKDVGILVVNC-SIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQAN 277 (537)
Q Consensus 199 ~~l~~~Aa~~aL~~agi~~~dId~LI~~s-s~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g 277 (537)
+.+|+++||+++|++++|||+||++| ++++..|+++.+|+++||+++++.+||++ +||+|++.||++|+++++++
T Consensus 64 ---a~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~~di~-~~C~g~~~aL~~A~~~i~~~ 139 (353)
T PRK12880 64 ---GKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLG-QACAGYLYGLFVAHSLIQSG 139 (353)
T ss_pred ---HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCceEEehh-hhhHHHHHHHHHHHHHHHcC
Confidence 59999999999999999999999886 56999999999999999998889999998 79999999999999999999
Q ss_pred CCCeEEEEEecccccccCCCCCcCCCccccccccceEEEEEeccCccccccceeeeeEEEEEeccCCCccccceeccccc
Q 009313 278 PNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVYQEEDEQ 357 (537)
Q Consensus 278 ~~~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~t~~~sd~~~~~~v~~~~d~~ 357 (537)
+.+ ||||++|.+|. +.++.|+. +..+|||||+|+||++++... .. ....+|++.++.+..+.++.
T Consensus 140 ~~~-~LVv~~e~~S~-~~~~~d~~---~~~lFGDGAaA~vl~~~~~~~--------~~--~~~~~~~~~~~~~~~p~g~~ 204 (353)
T PRK12880 140 LGK-ILLICGDTLSK-FIHPKNMN---LAPIFGDGVSATLIEKTDFNE--------AF--FELGSDGKYFDKLIIPKGAM 204 (353)
T ss_pred CCC-EEEEEehhhhc-cCCcccCC---ceeeecccceEEEEEecCCCC--------ce--EEEEecCCCCCeEEecCCCc
Confidence 888 99999999998 44556664 467999999999999755321 11 23456777777776664321
Q ss_pred cccccccch-h-hhhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccEE
Q 009313 358 GFRGLKVSK-N-IMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHF 435 (537)
Q Consensus 358 G~~g~~ls~-d-l~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~ 435 (537)
...+..... + .+......-...+...|+.++.+.. ..+....++++++ +|+++ +|||+|
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~---~~~~~~i~~~L~~----------~gl~~------~did~~ 265 (353)
T PRK12880 205 RIPKADIFNDDSLMQTEEFRQLENLYMDGANIFNMAL---ECEPKSFKEILEF----------SKVDE------KDIAFH 265 (353)
T ss_pred CCCccccccccccccccccccCceEEEcCHHHHHHHH---HHHHHHHHHHHHH----------cCCCH------HHCCEE
Confidence 111111100 0 0000000000011122322211000 0011122344443 78886 999999
Q ss_pred EEcCCCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEchHHHhhheeEEEe
Q 009313 436 CVHAASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCNSVVWQAM 515 (537)
Q Consensus 436 ~~H~~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~~ 515 (537)
++||+|+++++.+++.||++++++. +.++++||||||+|+|+.|++..++|+++ +++++||+|++|+++++||.
T Consensus 266 v~HQ~~~~i~~~i~~~Lgl~~ek~~--~~~l~~~GNtssasip~~L~~~~~~~~~~----~ll~~~G~G~s~g~~ll~~~ 339 (353)
T PRK12880 266 LFHQSNAYLVDCIKEELKLNDDKVP--NFIMEKYANLSACSLPALLCELDTPKEFK----ASLSAFGAGLSWGSAVLNFK 339 (353)
T ss_pred EECCCCHHHHHHHHHHhCCCHHHhh--hhhHHhhCCHHHHHHHHHHHHHHHcCCcE----EEEEEEchhhhheEeEEEEC
Confidence 9999999999999999999999983 35689999999999999999999887764 99999999999999999995
Q ss_pred c
Q 009313 516 R 516 (537)
Q Consensus 516 ~ 516 (537)
+
T Consensus 340 ~ 340 (353)
T PRK12880 340 D 340 (353)
T ss_pred C
Confidence 4
No 18
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.1e-46 Score=372.58 Aligned_cols=347 Identities=21% Similarity=0.276 Sum_probs=280.9
Q ss_pred eEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHH-HcCCceeEEccCCcccc-c-cccchhhhhhhhHH
Q 009313 123 VYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMK-SSGIGDETYIPKVVMSA-E-ENCMTMKHGRLEAS 199 (537)
Q Consensus 123 v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~-~sGI~~r~~~~~~~~~~-p-~~~~~ma~~~~ea~ 199 (537)
.+|.++++++|+ +++++.|+...+..... .+..+-+.+.+. +.+|.+|+...|.+.+. | .....+.-+.||+.
T Consensus 2 a~i~sv~t~~Pp--y~~~Qse~~d~f~~~~~--~~~~~~I~r~l~~~~~i~~R~~v~Pl~~y~e~~~f~ekN~ifie~a~ 77 (356)
T COG3424 2 AVIASVATALPP--YRYNQSEITDSFAELPF--QEGREDIPRVLHANAQINRRHLVLPLDWYREPHGFGEKNEIFIEEAV 77 (356)
T ss_pred ceeeecccCCCc--cccchHHHHHHHHHhcc--ccchHHHHHHHhhccccccceecccHhhccCCCChhhhhhhHHHHHH
Confidence 479999999999 89999887776665322 222344456666 66888887766655432 1 12335667889999
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCC
Q 009313 200 MVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPN 279 (537)
Q Consensus 200 ~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~ 279 (537)
.++++|.++||+.+++.|+|||+|++.|+++..+||+.++|+++||+++++..+.+.|+||++|..++..|+++++++|.
T Consensus 78 ~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P~ 157 (356)
T COG3424 78 PLGVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPD 157 (356)
T ss_pred HHHHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHhhCcc
Confidence 99999999999999999999999999999998999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEecccccccCCCCC-cCCCccccccccceEEEEEeccCcccc--ccceeeeeEEEEEeccCCCccccceecccc
Q 009313 280 NYAVVVSTEMVGYNWYAGRD-RSMMIPNCFFRMGCSAILMSNRRRDYH--RAKYRLQLIVRTHTGADDRSFRSVYQEEDE 356 (537)
Q Consensus 280 ~~aLVVs~E~~S~~~~~~~d-r~~ll~~~lfgDGAAAvLLs~~~~~~~--~~~~~L~~~v~t~~~sd~~~~~~v~~~~d~ 356 (537)
.+|||||.|.||.++...++ ++.++...+||||+||+|++.+..... ..++.+.+..+ +...|+ -+.|-+...+
T Consensus 158 ~~vlvV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~S-tL~~ds--e~~Mgwdv~d 234 (356)
T COG3424 158 ANVLVVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFS-TLYPDS--EDIMGWDVGD 234 (356)
T ss_pred ceEEEEEeeeeeeeeecCCCCcccceeeeeecCCeeEEEEeccccccccCCCCceeccccc-ccCCcc--ccccceeecC
Confidence 99999999999997765544 457889999999999999998654211 12233332222 222222 2334455555
Q ss_pred ccccccccchhhhhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccEEE
Q 009313 357 QGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFC 436 (537)
Q Consensus 357 ~G~~g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~ 436 (537)
+| ..+.+|+|+|.+...+++.|+++ .+.. .+++. +||++|+
T Consensus 235 ~G-~~~vlSrdlp~lIe~~l~~~V~~----------------------fL~~----------~~ls~------~dI~~w~ 275 (356)
T COG3424 235 QG-LKVVLSRDLPNLIESYLAPNVTT----------------------FLAT----------HGLSI------EDIEAWV 275 (356)
T ss_pred Cc-EEEEEcCchhHHHHHHhhhhHHH----------------------HHHH----------cCCch------hhhceee
Confidence 55 45788999998877666665432 2332 67775 9999999
Q ss_pred EcCCCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEchHHHhhheeEEEec
Q 009313 437 VHAASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCNSVVWQAMR 516 (537)
Q Consensus 437 ~H~~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~~~ 516 (537)
.|+||++|++++++.|||+++.++.||..|++|||+||+++++.|.+.++++ .++|.+.++.+||+||+...++++|.+
T Consensus 276 ~HPGG~KVida~~~sLgls~e~l~~s~~~L~~~GNMSSatvLfVL~d~l~~~-~~~g~~Gl~~A~GPGf~sElvL~~w~~ 354 (356)
T COG3424 276 VHPGGPKVIDAYEESLGLSPEALELSWDVLREYGNMSSATVLFVLEDTLQKA-PKSGSRGLMFAMGPGFCSELVLLDWEG 354 (356)
T ss_pred eCCCCchHHHHHHHhcCCCHHHHHHHHHHHHHhCCccchhhHHHHHHHHHhc-CCCCcceeeeecCCcceeeeeeEEeec
Confidence 9999999999999999999999999999999999999999999999999986 689999999999999999999999976
No 19
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=100.00 E-value=2.2e-45 Score=381.15 Aligned_cols=323 Identities=16% Similarity=0.284 Sum_probs=243.4
Q ss_pred ceEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeEEccCCccccccccchhhhhhhhHHHH
Q 009313 122 SVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMV 201 (537)
Q Consensus 122 ~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~p~~~~~ma~~~~ea~~l 201 (537)
.|+|.++|.|+|+ ++++|+|+.+.++. ++ .+|.+++||++|++.++++ ...+|
T Consensus 2 ~v~I~~~g~~lP~--~~v~~~e~~~~~~~----~~------~~i~~~~gi~~r~~~~~~~-----~~~~l---------- 54 (326)
T CHL00203 2 GVHILSTGSSVPN--FSVENQQFEDIIET----SD------HWISTRTGIKKRHLAPSST-----SLTKL---------- 54 (326)
T ss_pred ccEEEEEEEECCC--eEEcHHHHHHhcCC----Ch------hhEeeccCeEEEEeCCCCC-----CHHHH----------
Confidence 5899999999999 99999999988752 22 2678999999999877654 23444
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCCCe
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNY 281 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~~ 281 (537)
+.+|++++|+++|++|+|||.||++|+.....+..+..+++++|++ ++++++++ ++|++++.||.+|.++|+++..++
T Consensus 55 a~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~~~~~~~v~~~Lg~~-~~~~~~v~-~~Casg~~al~~A~~~i~sg~~~~ 132 (326)
T CHL00203 55 AAEAANKALDKAHMDPLEIDLIILATSTPDDLFGSASQLQAEIGAT-RAVAFDIT-AACSGFILALVTATQFIQNGSYKN 132 (326)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCchHHHHHHHhCCC-CCceeeec-ccchhHHHHHHHHHHHHHcCCCCE
Confidence 6999999999999999999999998753222344578899999998 68999999 799999999999999999999999
Q ss_pred EEEEEecccccccCCCCCcCCCccccccccceEEEEEeccCccccccceeeeeEEEEEeccCCCccccceeccccccccc
Q 009313 282 AVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVYQEEDEQGFRG 361 (537)
Q Consensus 282 aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~t~~~sd~~~~~~v~~~~d~~G~~g 361 (537)
+|||++|.+|. +.+++++. +..+|||||+|+||++.+.. . ++.....+|++.++.+.....+...
T Consensus 133 ~Lvv~~e~~s~-~~~~~~~~---~~~~fgDga~A~ll~~~~~~------~---~~~~~~~t~g~~~~~~~~~~~~~~~-- 197 (326)
T CHL00203 133 ILVVGADTLSK-WIDWSDRK---TCILFGDGAGAAIIGASYEN------S---ILGFKLCTDGKLNSHLQLMNKPVNN-- 197 (326)
T ss_pred EEEEEehhhhC-cCCcccCC---ceEEEcceeeEEEEEEcCCC------C---eEEEEEEEcCCCcceEEecCCCCCc--
Confidence 99999999987 45556654 46899999999999976542 1 2233445666655543322110000
Q ss_pred cccchh-hhhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccEEEEcCC
Q 009313 362 LKVSKN-IMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVHAA 440 (537)
Q Consensus 362 ~~ls~d-l~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H~~ 440 (537)
...... .+. + . ...+...|+.++. ..+. .+....++++++ +|+++ +|||||++||+
T Consensus 198 ~~~~~~~~~~--~-~-~~~~~~~g~~~~~--~~~~-~~~~~i~~~L~~----------~g~~~------~did~~~~hq~ 254 (326)
T CHL00203 198 QSFGTTKLPQ--G-Q-YQSISMNGKEVYK--FAVF-QVPAVIIKCLNA----------LNISI------DEVDWFILHQA 254 (326)
T ss_pred cccccccccc--C-C-cceEEECCHHHHH--HHHH-HHHHHHHHHHHH----------cCCCH------HHCCEEEECCC
Confidence 000000 000 0 0 0112222322210 0000 011123444443 88887 99999999999
Q ss_pred CHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEchHHHhhheeEEE
Q 009313 441 SKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCNSVVWQA 514 (537)
Q Consensus 441 g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~ 514 (537)
|+++++.+++.||++++++ ..++++||||+|||+|+.|++++++|++++||+|++++||+|++|+++|+||
T Consensus 255 ~~~~~~~~~~~lgl~~~k~---~~~l~~~Gn~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~v~~~ 325 (326)
T CHL00203 255 NKRILEAIANRLSVPNSKM---ITNLEKYGNTSAASIPLALDEAIQNNKIQPGQIIVLSGFGAGLTWGAIVLKW 325 (326)
T ss_pred CHHHHHHHHHHhCCCHHHh---hhHHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEchhhhheEEEEEe
Confidence 9999999999999999999 5799999999999999999999999999999999999999999999999998
No 20
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=9.3e-45 Score=376.46 Aligned_cols=325 Identities=14% Similarity=0.202 Sum_probs=242.9
Q ss_pred CceEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeEEccCCccccccccchhhhhhhhHHH
Q 009313 121 RSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASM 200 (537)
Q Consensus 121 ~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~p~~~~~ma~~~~ea~~ 200 (537)
+.++|.+++.|+|+ ++++++++.+..+. ++ +++.+++||++|++.. ++ ...+|
T Consensus 3 ~~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~------~~i~~~~Gi~~R~~~~-~~-----~~~~l--------- 55 (329)
T PRK07204 3 RYISIKGIGTYLPK--RKVDSLELDKKLDL----PE------GWVLKKSGVKTRHFVD-GE-----TSSYM--------- 55 (329)
T ss_pred CCcEEEEEEEeCCC--ceecHHHHHHhhCC----CH------hHhhhccCceEEeecC-CC-----CHHHH---------
Confidence 46899999999999 99999999887652 33 3688899999999887 33 23455
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCccHHHHHHHHcCCCC-CeeEEEecCccchHHHHHHHHHHHHHHcCC
Q 009313 201 VMFGALDELFEKTKVRPKDVGILVVNCS-IFNPTPSLSAMIINHYKMRG-NIISYNLGGMGCSAGVIGVDLARDMLQANP 278 (537)
Q Consensus 201 l~~~Aa~~aL~~agi~~~dId~LI~~ss-~~~~~Ps~a~~I~~~lGl~~-~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~ 278 (537)
+.+|++++|+++|++|+|||+||++++ +++..|+.+.+|++++|+++ ++++++++ ++|++++.||.+|.++++++.
T Consensus 56 -a~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~-~~C~~~~~al~~a~~~l~~g~ 133 (329)
T PRK07204 56 -GAEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDIN-STCLSFITALDTISYAIECGR 133 (329)
T ss_pred -HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCceEEEcc-chhHHHHHHHHHHHHHHHCCC
Confidence 599999999999999999999998864 56678999999999999985 47999999 799999999999999999999
Q ss_pred CCeEEEEEecccccccCCCCCcCCCccccccccceEEEEEeccCccccccceeeeeEEEEEeccCCCccccceecccccc
Q 009313 279 NNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVYQEEDEQG 358 (537)
Q Consensus 279 ~~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~t~~~sd~~~~~~v~~~~d~~G 358 (537)
.++||||++|..+. ..+..++. +..+|||||+|+||++++.. .+ ++.++..+++..++....+..+
T Consensus 134 ~~~~Lvv~~e~~s~-~~~~~~~~---~~~lfGDGAaA~ll~~~~~~-----~~---il~~~~~t~~~~~~~~~~~~~~-- 199 (329)
T PRK07204 134 YKRVLIISSEISSV-GLNWGQNE---SCILFGDGAAAVVITKGDHS-----SR---ILASHMETYSSGAHLSEIRGGG-- 199 (329)
T ss_pred CCEEEEEEeccccC-CCCcccCc---ceEEEecccEEEEEEEcCCC-----Cc---EEEEEEEEecCCCCceEEecCC--
Confidence 99999999999886 33444443 35899999999999986542 22 3334445555443322221110
Q ss_pred ccccccchhhhhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccEEEEc
Q 009313 359 FRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVH 438 (537)
Q Consensus 359 ~~g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H 438 (537)
....-+.+.. ..... ..+...|+.+... ....+....++++++ +|+++ +|||+|++|
T Consensus 200 -~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~---~~~~~~~~i~~~L~~----------~gl~~------~did~~~~H 256 (329)
T PRK07204 200 -TMIHPREYSE-ERKED--FLFDMNGRAIFKL---SSKYLMKFIDKLLMD----------AGYTL------ADIDLIVPH 256 (329)
T ss_pred -cCCCCccccc-ccccC--ceEEECCHHHHHH---HHHHHHHHHHHHHHH----------cCCCH------HHCCEEEeC
Confidence 0000000000 00000 0011112211100 000111122344443 88987 999999999
Q ss_pred CCCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEchHHHhhheeEEE
Q 009313 439 AASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCNSVVWQA 514 (537)
Q Consensus 439 ~~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~ 514 (537)
|+|+.+++.+++.|+++++++ ..++++||||+|+|+++.|++++++|++++||+|++++||+|++|+++++++
T Consensus 257 ~~~~~~~~~i~~~l~l~~e~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~ll~~ 329 (329)
T PRK07204 257 QASGPAMRLIRKKLGVDEERF---VTIFEDHGNMIAASIPVALFEAIKQKKVQRGNKILLLGTSAGLSIGGILLEY 329 (329)
T ss_pred CCCHHHHHHHHHHcCCCHHHh---hhhHhhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhheeeEEeC
Confidence 999999999999999999998 6899999999999999999999999999999999999999999999999985
No 21
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=2.2e-44 Score=372.51 Aligned_cols=318 Identities=15% Similarity=0.248 Sum_probs=248.5
Q ss_pred CceEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeEEccCCccccccccchhhhhhhhHHH
Q 009313 121 RSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASM 200 (537)
Q Consensus 121 ~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~p~~~~~ma~~~~ea~~ 200 (537)
.+++|.++++|+|+ ++++++|+.+..+. ++ +++.+++||++|++.++++. ..+|
T Consensus 3 ~~~~I~~ig~~~P~--~~v~~~e~~~~~~~----~~------~~i~~~~Gi~~r~~~~~~~~-----~~~l--------- 56 (325)
T PRK12879 3 SYARITGIGTYVPP--RVLTNDDLETFIDT----SD------EWIVQRTGIKERRIAHVEEY-----TSDL--------- 56 (325)
T ss_pred CCCEEEEEEEECCC--cEEcHHHHHHhcCC----CH------HHhhhccCceEEEECCCCCC-----HHHH---------
Confidence 56899999999999 99999999987542 33 25889999999999876542 3455
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCC
Q 009313 201 VMFGALDELFEKTKVRPKDVGILVVNCS-IFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPN 279 (537)
Q Consensus 201 l~~~Aa~~aL~~agi~~~dId~LI~~ss-~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~ 279 (537)
+.+|++++|+++|++++|||.||++++ +++..|+.+.+|++++|++ ++++++++ +||++++.||.+|.++|++++.
T Consensus 57 -a~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~-~~~~~~v~-~~C~~~~~al~~A~~~l~~g~~ 133 (325)
T PRK12879 57 -AIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIP-NAAAFDIN-AACAGFLYGLETANGLITSGLY 133 (325)
T ss_pred -HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-CCcEEEEC-ccchHHHHHHHHHHHHHHcCCC
Confidence 599999999999999999999998864 5778899999999999997 58999999 7999999999999999999999
Q ss_pred CeEEEEEecccccccCCCCCcCCCccccccccceEEEEEeccCccccccceeeeeEEEEEeccCCCccccceeccccccc
Q 009313 280 NYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVYQEEDEQGF 359 (537)
Q Consensus 280 ~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~t~~~sd~~~~~~v~~~~d~~G~ 359 (537)
++||||++|.++. +.+..++. ..++|||||+|+||++++... ++..+...++++.++.++.+..
T Consensus 134 ~~~Lvv~~e~~s~-~~~~~~~~---~~~~~GDgAaA~ll~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~---- 197 (325)
T PRK12879 134 KKVLVIGAERLSK-VTDYTDRT---TCILFGDGAGAVVLEATENEP--------GFIDYVLGTDGDGGDILYRTGL---- 197 (325)
T ss_pred CEEEEEEehhhcC-cCCccccC---ceEEEeecceEEEEEecCCCC--------CeEEEEEEEcCCCCCeEEEcCC----
Confidence 9999999999887 33445554 357999999999999876431 2334556667766665554321
Q ss_pred cccccchhhhhhhcccccccccccCCCccccchhhHHHH---HHHHHHHHhhhhhhcccccccCCCCCCcCccccccEEE
Q 009313 360 RGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFA---TLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFC 436 (537)
Q Consensus 360 ~g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~~~~~---~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~ 436 (537)
|.....+. . ..+.++...|..+ +.+.. ....++++++ +|+++ +|||+|+
T Consensus 198 -~~~~~~~~-~----~~~~~~~~~~~~~------~~~~~~~~~~~i~~~L~~----------~g~~~------~did~~~ 249 (325)
T PRK12879 198 -GTTMDRDA-L----SGDGYIVQNGREV------FKWAVRTMPKGARQVLEK----------AGLTK------DDIDWVI 249 (325)
T ss_pred -CCCCCccc-c----ccCccEEEcCHHH------HHHHHHHHHHHHHHHHHH----------cCCCH------HHCCEEE
Confidence 11111100 0 0001111112111 11111 1123444443 78886 9999999
Q ss_pred EcCCCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEchHHHhhheeEEE
Q 009313 437 VHAASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCNSVVWQA 514 (537)
Q Consensus 437 ~H~~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~ 514 (537)
+||+|+++++.+++.||++++++ ..++++|||++|+|+|+.|++++++|++++||+|++++||+|++++++++||
T Consensus 250 ~h~~~~~~~~~~~~~lg~~~~~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~l~~~ 324 (325)
T PRK12879 250 PHQANLRIIESLCEKLGIPMEKT---LVSVEYYGNTSAATIPLALDLALEQGKIKPGDTLLLYGFGAGLTWAALLVKW 324 (325)
T ss_pred ECCCCHHHHHHHHHHcCCCHHHh---hhhHhhhCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhEEEEEEe
Confidence 99999999999999999999999 4689999999999999999999999999999999999999999999999998
No 22
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=5.5e-44 Score=371.87 Aligned_cols=320 Identities=16% Similarity=0.187 Sum_probs=241.7
Q ss_pred CCceEEEEEeEEeCCCCcccCHHHHHHHHhccC---CCChhhHHHHHHHHHHcCCceeEEccCCccccccccchhhhhhh
Q 009313 120 PRSVYLVDFACYRPSDDLKVTREQFIEVAGKWS---KSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRL 196 (537)
Q Consensus 120 ~~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~---~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~p~~~~~ma~~~~ 196 (537)
..+++|.+++.|+|+ ++++++++.+.+.... ..++ +++.+++||++|++.++++ ...+|
T Consensus 3 ~~~v~I~~~g~~lP~--~~v~~~~~~~~~~~~~~~~~~~~------~~i~~~~Gi~~R~~~~~~~-----~~~~l----- 64 (338)
T PRK09258 3 YSNVAILSLAYELAP--VVVTSSEIEERLAPLYERLRLPP------GQLEALTGIRERRWWPEGT-----QLSDG----- 64 (338)
T ss_pred ccceEEEEEEecCCC--ccCcHHHHHHHhhhcccccCCCh------hHhhhhcCceeEecCCCCC-----CHHHH-----
Confidence 357999999999999 9999999998764311 1122 3577889999999976543 22344
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHH
Q 009313 197 EASMVMFGALDELFEKTKVRPKDVGILVVNCS-IFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQ 275 (537)
Q Consensus 197 ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss-~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~ 275 (537)
+.+|++++|+++|++++|||.||++|+ +++..|+++.+|++++|+++++.+++++ +||+|++.||++|.++|+
T Consensus 65 -----a~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~-~~C~~~~~al~~A~~~i~ 138 (338)
T PRK09258 65 -----AIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCANFDVS-NACLGFLNGMLDAANMIE 138 (338)
T ss_pred -----HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCceeehh-hhhHHHHHHHHHHHHHHH
Confidence 699999999999999999999998864 5888999999999999998779999999 599999999999999999
Q ss_pred cCCCCeEEEEEecccccccCCCC------CcC------CCccccccccceEEEEEeccCccccccceeeeeEEEEEeccC
Q 009313 276 ANPNNYAVVVSTEMVGYNWYAGR------DRS------MMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGAD 343 (537)
Q Consensus 276 ~g~~~~aLVVs~E~~S~~~~~~~------dr~------~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~t~~~sd 343 (537)
+++.++||||++|.++.. +++. +.. ..+...+|||||+|+||++.+... ..+++.+ ....++
T Consensus 139 ~g~~~~~Lvv~~e~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~--~~~~~~~---~~~~~~ 212 (338)
T PRK09258 139 LGQIDYALVVSGESAREI-VEATIDRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSLHP--RGHRLLG---GVTRAA 212 (338)
T ss_pred cCCCCEEEEEEecccchh-ccchhhhhccCccchhhhhhccceEEecccceEEEEecCCCCC--Ccceeee---eeeecC
Confidence 999999999999998773 2211 111 112357899999999999865421 1233332 333344
Q ss_pred CCccccceeccccccccccccchhhhhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCC
Q 009313 344 DRSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKP 423 (537)
Q Consensus 344 ~~~~~~v~~~~d~~G~~g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~ 423 (537)
++.++.+... ...+..+.+.+.. +... ......++++++ .|+++
T Consensus 213 ~~~~~~~~~~-------~~~~~~~~~~~~~------------------~~~~-~~~~~~~~~L~~----------~g~~~ 256 (338)
T PRK09258 213 TEHHELCQGG-------RDGMRTDAVGLLK------------------EGVE-LAVDTWEAFLAQ----------LGWAV 256 (338)
T ss_pred CCcccccccC-------ccceEEcHHHHHH------------------HHHH-HHHHHHHHHHHH----------cCCCH
Confidence 4433211100 0011111111100 0000 011122444443 78886
Q ss_pred CCcCccccccEEEEcCCCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEch
Q 009313 424 YIPDYKLAFEHFCVHAASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGS 503 (537)
Q Consensus 424 y~pdf~~did~~~~H~~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd~VlliafGs 503 (537)
+|||+|++||+|+++++.+++.||++++++ ..++++||||+|+|+++.|++++++|++++||+|++++||+
T Consensus 257 ------~did~~i~H~~~~~~~~~~~~~lgl~~~k~---~~~~~~~GN~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~ 327 (338)
T PRK09258 257 ------EQVDRVICHQVGAAHTRAILKALGIDPEKV---FTTFPTLGNMGPASLPITLAMAAEEGFLKPGDRVALLGIGS 327 (338)
T ss_pred ------HHCCEEecCCCCHHHHHHHHHHhCCCHHHc---eehHhhhCCcHHhHHHHHHHHHHHhCCCCCCCEEEEEEech
Confidence 999999999999999999999999999999 57889999999999999999999999999999999999999
Q ss_pred HHHhhheeEEE
Q 009313 504 GFKCNSVVWQA 514 (537)
Q Consensus 504 G~~~~s~v~r~ 514 (537)
|++|+++++||
T Consensus 328 G~s~~~~~~~~ 338 (338)
T PRK09258 328 GLNCSMLEVKW 338 (338)
T ss_pred hHhhHhHeeeC
Confidence 99999999986
No 23
>PRK06840 hypothetical protein; Validated
Probab=100.00 E-value=1.2e-43 Score=369.92 Aligned_cols=330 Identities=17% Similarity=0.165 Sum_probs=246.0
Q ss_pred CCceEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeEEccCCccccccccchhhhhhhhHH
Q 009313 120 PRSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEAS 199 (537)
Q Consensus 120 ~~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~p~~~~~ma~~~~ea~ 199 (537)
|++|+|.+++.|+|+ ++++++++.+..+. ++ +++.+++||++|+++++++ ...+|
T Consensus 2 ~~~v~I~~~~~~lP~--~~v~~~~l~~~~g~----~~------~~~~~~~Gi~~r~~~~~~~-----~~~~l-------- 56 (339)
T PRK06840 2 EMNVGIVGTGVYLPK--DVMTAEEIAEKTGI----PE------EVVIEKFGIYEKPVPGPED-----HTSDM-------- 56 (339)
T ss_pred CCceEEEEEEEeCCC--cccCHHHHHHHhCC----CH------HHHhhhcCcceEeeCCCCC-----CHHHH--------
Confidence 578999999999999 89999999887652 33 2577899999999987654 23455
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEecc--CCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHc-
Q 009313 200 MVMFGALDELFEKTKVRPKDVGILVVNCS--IFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQA- 276 (537)
Q Consensus 200 ~l~~~Aa~~aL~~agi~~~dId~LI~~ss--~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~- 276 (537)
+.+|++++|+++|++|+|||.||++++ +++..|+.+.+|++++|++ ++++++++ ++|++++.||.+|.++|++
T Consensus 57 --a~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~-~~~~~~v~-~~C~~~~~al~~A~~~l~~~ 132 (339)
T PRK06840 57 --AIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAK-NAWAFDIM-AVCASFPIALKVAKDLLYSD 132 (339)
T ss_pred --HHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCC-Cccccccc-ccchHHHHHHHHHHHHHhcC
Confidence 599999999999999999999997643 4778999999999999997 68999999 6999999999999999999
Q ss_pred CCCCeEEEEEecccccccCCCCCcCCCccccccccceEEEEEeccCccccccceeeeeEEEEEeccCCCccccceecccc
Q 009313 277 NPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVYQEEDE 356 (537)
Q Consensus 277 g~~~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~t~~~sd~~~~~~v~~~~d~ 356 (537)
+..+++|||++|..+. +.+..++... ....|||||+|+||++++.. ++ ++.+...+|++.++.+..+..
T Consensus 133 g~~~~~Lvv~~~~~s~-~~~~~~~~~~-~~~~~GDgAaA~ll~~~~~~-----~~---il~~~~~t~~~~~~~~~~~~~- 201 (339)
T PRK06840 133 PSIENVLLVGGYRNSD-LVDYDNPRTR-FMFNFAAGGSAALLKKDAGK-----NR---ILGSAIITDGSFSEDVRVPAG- 201 (339)
T ss_pred CCccEEEEEeeccccc-ccCcCCCCee-eeccCCCceeEEEEEecCCC-----Cc---eEEEEEEEcCCccceEEecCC-
Confidence 6678999999999877 3333333310 01247999999999976542 23 344556677777666554432
Q ss_pred ccccccccchhhhhhhcccccccccccCCCccc--cchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccE
Q 009313 357 QGFRGLKVSKNIMEIGGDALKTNITTLGPLVLP--FSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEH 434 (537)
Q Consensus 357 ~G~~g~~ls~dl~~~~g~~lk~ni~~lgp~vlp--~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~ 434 (537)
....+.+.+.... ++ ..+...++..+- +.+.....+....++++++ +|+++ +|||+
T Consensus 202 --g~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~----------~gl~~------~did~ 259 (339)
T PRK06840 202 --GTKQPASPETVEN-RQ---HYLDVIDPESMKERLDEVSIPNFLKVIREALRK----------SGYTP------KDIDY 259 (339)
T ss_pred --CcCCCCccccccc-cc---ceEEEcCcHHHHHHhHhhHHHHHHHHHHHHHHH----------cCCCH------HHCCE
Confidence 1111222111000 00 001111111100 0000000011122344443 89987 99999
Q ss_pred EEEcCCCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEchHHHhhheeEEE
Q 009313 435 FCVHAASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCNSVVWQA 514 (537)
Q Consensus 435 ~~~H~~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~ 514 (537)
|++||+|+++++.+++.||++++++ . ++.+||||+|+|++++|++++++|++++||++++++||+|++|+++++||
T Consensus 260 ~~~h~~~~~~~~~~~~~Lgl~~~~~---~-~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~ill~~~G~G~s~~~~~l~~ 335 (339)
T PRK06840 260 LAILHMKRSAHIALLEGLGLTEEQA---I-YLDEYGHLGQLDQILSLHLALEQGKLKDGDLVVLVSAGTGYTWAATVIRW 335 (339)
T ss_pred EEECCcCHHHHHHHHHHcCCCHHHe---E-eHHhccchhhhhHHHHHHHHHHcCCCCCCCEEEEEEEehhhheeEEEEEe
Confidence 9999999999999999999999998 2 68999999999999999999999999999999999999999999999999
Q ss_pred e
Q 009313 515 M 515 (537)
Q Consensus 515 ~ 515 (537)
.
T Consensus 336 ~ 336 (339)
T PRK06840 336 G 336 (339)
T ss_pred c
Confidence 4
No 24
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=100.00 E-value=2.4e-43 Score=363.24 Aligned_cols=319 Identities=18% Similarity=0.280 Sum_probs=246.6
Q ss_pred ceEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeEEccCCccccccccchhhhhhhhHHHH
Q 009313 122 SVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMV 201 (537)
Q Consensus 122 ~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~p~~~~~ma~~~~ea~~l 201 (537)
+++|.++++|+|+ ++++++++.+..+. ++ +++.+++||++|+++++++ ...+|
T Consensus 1 ~~~I~~i~~~lP~--~~~~~~~~~~~~~~----~~------~~~~~~~Gi~~r~~~~~~~-----~~~~l---------- 53 (320)
T cd00830 1 NARILGIGSYLPE--RVVTNDELEKRLDT----SD------EWIRTRTGIRERRIADPGE-----TTSDL---------- 53 (320)
T ss_pred CCEEEEEEEECCC--cEEcHHHHHHHcCC----CH------HHhhhccCceEEeeCCCCC-----CHHHH----------
Confidence 4799999999999 89999999988742 33 3678899999999987654 23455
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCCC
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVNCS-IFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNN 280 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ss-~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~ 280 (537)
+.+|++++|+++|+++++||.||++++ +++..|+.+.+|++++|++ ++++++++ ++|++++.||.+|.+++++++.+
T Consensus 54 a~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~ 131 (320)
T cd00830 54 AVEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAK-NAAAFDIN-AACSGFLYGLSTAAGLIRSGGAK 131 (320)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCcEeecc-ccchHHHHHHHHHHHHHHcCCCC
Confidence 599999999999999999999998865 4666899999999999997 79999999 79999999999999999999999
Q ss_pred eEEEEEecccccccCCCCCcCCCccccccccceEEEEEeccCccccccceeeeeEEEEEeccCCCccccceecccccccc
Q 009313 281 YAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVYQEEDEQGFR 360 (537)
Q Consensus 281 ~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~t~~~sd~~~~~~v~~~~d~~G~~ 360 (537)
+||||++|.++. +.+++++. ...+|||||+|+||++.+.. ++ ++.++..++++.++.+..+..+..
T Consensus 132 ~vLvv~~e~~s~-~~~~~~~~---~~~~~GDgAaA~ll~~~~~~-----~~---i~~~~~~~~~~~~~~~~~~~~~~~-- 197 (320)
T cd00830 132 NVLVVGAETLSR-ILDWTDRS---TAVLFGDGAGAVVLEATEED-----PG---ILDSVLGSDGSGADLLTIPAGGSR-- 197 (320)
T ss_pred EEEEEEehhhcc-ccCcccCC---ceEEEeccceEEEEEecCCC-----Cc---EEEEEEEEcCCCCCeEEeCCCCcC--
Confidence 999999999887 33344443 46899999999999987642 23 344556677777776655432110
Q ss_pred ccccchhhhhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccEEEEcCC
Q 009313 361 GLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVHAA 440 (537)
Q Consensus 361 g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H~~ 440 (537)
.+. +.... -...+...++.++. .....+....++++++ +|+++ +|||+|++||+
T Consensus 198 -~~~--~~~~~----~~~~~~~~~~~~~~---~~~~~~~~~i~~~l~~----------~g~~~------~di~~~~~h~~ 251 (320)
T cd00830 198 -SPF--EDAEG----GDPYLVMDGREVFK---FAVRLMPESIEEALEK----------AGLTP------DDIDWFVPHQA 251 (320)
T ss_pred -Ccc--ccccc----cCccEEEcChHHHH---HHHHhhHHHHHHHHHH----------cCCCH------HHCCEEEECCC
Confidence 000 00000 00111112221110 0000111122334443 78887 99999999999
Q ss_pred CHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEchHHHhhheeE
Q 009313 441 SKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCNSVVW 512 (537)
Q Consensus 441 g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~ 512 (537)
++++++.+++.||++++++ ..++++|||++|+|+++.|++++++|++++||+|++++||+|++|+++++
T Consensus 252 ~~~~~~~~~~~lgl~~~~~---~~~~~~~Gn~~sas~~~~L~~~~~~~~~~~G~~vll~~~G~G~~~~~~l~ 320 (320)
T cd00830 252 NLRIIEAVAKRLGLPEEKV---VVNLDRYGNTSAASIPLALDEAIEEGKLKKGDLVLLLGFGAGLTWGAALL 320 (320)
T ss_pred CHHHHHHHHHHhCCCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchHHhhHHhhC
Confidence 9999999999999999999 57999999999999999999999999999999999999999999999874
No 25
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=100.00 E-value=2.4e-43 Score=363.84 Aligned_cols=316 Identities=21% Similarity=0.318 Sum_probs=247.7
Q ss_pred ceEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeEEccCCccccccccchhhhhhhhHHHH
Q 009313 122 SVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMV 201 (537)
Q Consensus 122 ~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~p~~~~~ma~~~~ea~~l 201 (537)
.++|.++++|+|+ ++++++++.+..+. ++ .++.+++||++|++..+++. ..+|
T Consensus 2 ~~~I~~i~~~~P~--~~~~~~~~~~~~~~----~~------~~i~~~~gi~~r~~~~~~~~-----~~~l---------- 54 (318)
T TIGR00747 2 YAGILGTGSYLPE--KVLTNADLEKMVDT----SD------EWIVTRTGIKERRIAADDET-----SSTM---------- 54 (318)
T ss_pred CCEEEEEEEECCC--ceecHHHHHHhcCC----ch------HHeecccCceEEEECCCCCC-----HHHH----------
Confidence 4899999999999 99999999887653 22 25788999999998766542 3455
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCCC
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVNCS-IFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNN 280 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ss-~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~ 280 (537)
+.+|++++|+++|++++|||.+|++++ +++..|+.+.++++++|++ ++++++++ +||++++.||.+|.++|+++..+
T Consensus 55 a~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~ 132 (318)
T TIGR00747 55 GFEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIK-GIPAFDLS-AACAGFIYALSVAKQYIESGKYK 132 (318)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCC-CCcEeehh-hhhHHHHHHHHHHHHHHHcCCCC
Confidence 599999999999999999999998864 5677899999999999998 58999998 79999999999999999999999
Q ss_pred eEEEEEecccccccCCCCCcCCCccccccccceEEEEEeccCccccccceeeeeEEEEEeccCCCccccceecccccccc
Q 009313 281 YAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVYQEEDEQGFR 360 (537)
Q Consensus 281 ~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~t~~~sd~~~~~~v~~~~d~~G~~ 360 (537)
++|||++|..+. +.++.++. ...+|||||+|+||++.+... ++++++..++++.++.++.+.++..
T Consensus 133 ~~Lvv~~e~~~~-~~~~~~~~---~~~~~GDGAaA~lL~~~~~~~--------~i~~~~~~~~~~~~~~~~~~~~~~~-- 198 (318)
T TIGR00747 133 TVLVVGAEKLSS-TLDWTDRG---TCVLFGDGAGAVVLGESEDPG--------GIISTHLGADGTQGEALYLPAGGRP-- 198 (318)
T ss_pred EEEEEEehhhcC-cCCcCCCC---eEEEEecceeEEEEeecCCCC--------cEEEEEEEEcCCCcceEEECCCCcC--
Confidence 999999999876 44445554 357899999999999876532 2444556667777766655543210
Q ss_pred ccccchhhhhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccEEEEcCC
Q 009313 361 GLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVHAA 440 (537)
Q Consensus 361 g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H~~ 440 (537)
.... ...+...|+.++. .... .+....++++++ +++++ +||+||++||+
T Consensus 199 --~~~~----------~~~~~~~~~~~~~--~~~~-~~~~~~~~~l~~----------~g~~~------~di~~~~~h~~ 247 (318)
T TIGR00747 199 --TSGP----------SPFITMEGNEVFK--HAVR-KMGDVVEETLEA----------NGLDP------EDIDWFVPHQA 247 (318)
T ss_pred --CCCC----------CCceEECCHHHHH--HHHH-HHHHHHHHHHHH----------cCCCH------HHCCEEEECCC
Confidence 0000 0011111211100 0000 011122344443 78887 99999999999
Q ss_pred CHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEchHHHhhheeEEE
Q 009313 441 SKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCNSVVWQA 514 (537)
Q Consensus 441 g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~ 514 (537)
++++++.+++.||++++|+. .++++||||+|+|+++.|+++.++|++++||+|+++++|+|++|+++++||
T Consensus 248 ~~~~~~~~~~~lgi~~~k~~---~~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~t~~~~~l~~ 318 (318)
T TIGR00747 248 NLRIIEALAKRLELDMSQVV---KTVHKYGNTSAASIPLALDELLRTGRIKPGDLLLLVAFGGGLTWGAALVRF 318 (318)
T ss_pred CHHHHHHHHHHcCCCHHHee---ehHhhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeeEEEEEC
Confidence 99999999999999999994 789999999999999999999999999999999999999999999999986
No 26
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=6.3e-42 Score=353.24 Aligned_cols=316 Identities=20% Similarity=0.292 Sum_probs=244.6
Q ss_pred CceEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeEEccCCccccccccchhhhhhhhHHH
Q 009313 121 RSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASM 200 (537)
Q Consensus 121 ~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~p~~~~~ma~~~~ea~~ 200 (537)
..|+|.++++|+|+ ++++++++.+..+. ++ .+|.+++||++|+++.+++ ... +
T Consensus 2 ~~v~I~ai~~~lP~--~~~~~~~~~~~~~~----~~------~~i~~~~gi~~r~~~~~~~-----~~~----------~ 54 (319)
T PRK09352 2 MYAKILGTGSYLPE--RVVTNDDLEKMVDT----SD------EWIVTRTGIKERRIAAPDE-----TTS----------D 54 (319)
T ss_pred CceEEEEEEEECCC--eEEcHHHHHHHcCC----CH------HHhhhhcCeEEEEeCCCCC-----CHH----------H
Confidence 36899999999999 99999999988653 23 3678899999998775543 223 4
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCC
Q 009313 201 VMFGALDELFEKTKVRPKDVGILVVNCS-IFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPN 279 (537)
Q Consensus 201 l~~~Aa~~aL~~agi~~~dId~LI~~ss-~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~ 279 (537)
++.+|++++|+++|++++|||.+|++++ ++...|+.+.+|+.++|++ ++++++++ ++|++++.||.+|.++|++|..
T Consensus 55 la~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~-~~~~~~v~-~~Casg~~al~~A~~~i~~g~~ 132 (319)
T PRK09352 55 LATEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAK-NAAAFDLS-AACSGFVYALSTADQFIRSGAY 132 (319)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCC-CCcEeecc-ccchhHHHHHHHHHHHHHcCCC
Confidence 4699999999999999999999998865 4666889999999999996 68999999 7999999999999999999999
Q ss_pred CeEEEEEecccccccCCCCCcCCCccccccccceEEEEEeccCccccccceeeeeEEEEEeccCCCccccceeccccccc
Q 009313 280 NYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVYQEEDEQGF 359 (537)
Q Consensus 280 ~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~t~~~sd~~~~~~v~~~~d~~G~ 359 (537)
++|||+++|.++. +++..++. ...+|||||+|+||++++.. + ++.++..++++.++.+..+.++..
T Consensus 133 ~~vLvv~~e~~s~-~~~~~~~~---~~~~~gDGaaA~ll~~~~~~------~---~~~~~~~~~~~~~~~~~~~~~~~~- 198 (319)
T PRK09352 133 KNVLVIGAEKLSR-IVDWTDRS---TCVLFGDGAGAVVLGASEEP------G---ILSTHLGSDGSYGDLLYLPGGGSR- 198 (319)
T ss_pred CEEEEEEehhhcc-ccCcccCC---ceEEEeccceEEEEEEcCCC------C---eEEEEEEEcCCCCCeEEeCCCCCC-
Confidence 9999999999887 44444554 35799999999999987642 1 233455566666654444332110
Q ss_pred cccccchhhhhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccEEEEcC
Q 009313 360 RGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVHA 439 (537)
Q Consensus 360 ~g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H~ 439 (537)
.+.+ ...+...|..+ ..+.... ..++++.++++ +|+++ +|||||++|+
T Consensus 199 --~~~~-----------~~~~~~~~~~~------~~~~~~~-~~~~i~~~l~~------~g~~~------~di~~~~~h~ 246 (319)
T PRK09352 199 --GPAS-----------PGYLRMEGREV------FKFAVRE-LAKVAREALEA------AGLTP------EDIDWLVPHQ 246 (319)
T ss_pred --CCCC-----------CCceEECCHHH------HHHHHHH-HHHHHHHHHHH------cCCCH------HHCCEEEECC
Confidence 0000 00111111110 0011111 12233332222 78887 9999999999
Q ss_pred CCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEchHHHhhheeEEE
Q 009313 440 ASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCNSVVWQA 514 (537)
Q Consensus 440 ~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~ 514 (537)
+|+++++.+++.||++++++ ..++++|||++++|++++|++++++|++++||++++++||+|++|+++++||
T Consensus 247 ~~~~~~~~~~~~lg~~~~~~---~~~~~~~Gn~~~a~~~~~L~~~~~~g~~~~Gd~vll~s~G~G~~~~~~ll~~ 318 (319)
T PRK09352 247 ANLRIIDATAKKLGLPMEKV---VVTVDKYGNTSAASIPLALDEAVRDGRIKRGDLVLLEGFGGGLTWGAALVRW 318 (319)
T ss_pred CCHHHHHHHHHHhCCCHHHh---hhhHHhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhheeEEEEEEe
Confidence 99999999999999999998 5789999999999999999999999999999999999999999999999997
No 27
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=9e-42 Score=361.25 Aligned_cols=347 Identities=18% Similarity=0.232 Sum_probs=240.1
Q ss_pred ceEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeEEccCCccccccccchhhhhhhhHHHH
Q 009313 122 SVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMV 201 (537)
Q Consensus 122 ~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~p~~~~~ma~~~~ea~~l 201 (537)
+|+|.++|+|+|+ ++++|+++.+.++......+ ...++|++++||++|++..++... +. +...++
T Consensus 2 ~v~I~gig~~lP~--~~v~n~~~~~~~~~~~~~~~---~~~~~i~~~~Gi~~R~~~~~~~~~---~~-------~~~~~L 66 (378)
T PRK06816 2 NVYITSTGAFLPG--EPVSNDEMEAYLGLINGKPS---RARRIILRNNGIKTRHYALDPEGR---PT-------HSNAQM 66 (378)
T ss_pred CeEEEeeeecCCC--CccCHHHHHHHHhhccCCcH---HHHHHHHHhCCCceEEEEECCCCC---CC-------CCHHHH
Confidence 5899999999999 89999999988764321111 122589999999999987543210 11 123566
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCCC
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVNCS-IFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNN 280 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ss-~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~ 280 (537)
+.+|+++||+++|++++|||.||++|+ +++..|+.+..|++++|++ ++++++++ ++|+|++.||.+|.+++++|+.+
T Consensus 67 a~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~-~~~~~~v~-~~Cas~~~al~~A~~~i~sg~~~ 144 (378)
T PRK06816 67 AAEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAP-PIEVVSSA-GVCAAGMMALKYAYLSVKAGESR 144 (378)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCC-CCceeeec-CcCHHHHHHHHHHHHHHHCCCCC
Confidence 799999999999999999999998864 5678899999999999998 58999998 79999999999999999999999
Q ss_pred eEEEEEecccccccCCCCC------------cC--C----CccccccccceEEEEEeccCccccccceeeeeEEEEEecc
Q 009313 281 YAVVVSTEMVGYNWYAGRD------------RS--M----MIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGA 342 (537)
Q Consensus 281 ~aLVVs~E~~S~~~~~~~d------------r~--~----ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~t~~~s 342 (537)
+||||++|.+|..+ ++.+ +. . -..+.+|||||+|+||++.+... ...+ ++...+..+
T Consensus 145 ~vLvv~~E~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~~~---g~~l-~~~~~~~~~ 219 (378)
T PRK06816 145 NAVATASELASRWF-RASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPRPD---GLSL-RIDWIDLRS 219 (378)
T ss_pred EEEEEeEccchhhh-hhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCCCC---CceE-EEEEEeeec
Confidence 99999999998733 2111 10 0 01135799999999999866421 1111 111112222
Q ss_pred CCCccccceecccc---cc-cccccc-chhhhhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhccccc
Q 009313 343 DDRSFRSVYQEEDE---QG-FRGLKV-SKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSS 417 (537)
Q Consensus 343 d~~~~~~v~~~~d~---~G-~~g~~l-s~dl~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~ 417 (537)
+...++.++..... ++ ..++.. ..+-+...+. ..+...++.+ .+..........++++++
T Consensus 220 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~i~~~L~~--------- 284 (378)
T PRK06816 220 YAGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAASA---LSLKQDVRLL---NENIVVYTIKPLLELVDK--------- 284 (378)
T ss_pred ccccCccceecCCccCCCCCccCcccCCHHHHHhccC---chHHhHHHHH---HHHhHHHHHHHHHHHHHH---------
Confidence 22222222211000 00 000100 0000000000 0000001000 000000101112333443
Q ss_pred ccCCCCCCcCccccccEEEEcCCCHHHHHHHHHHc-----CCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCC
Q 009313 418 LASTKPYIPDYKLAFEHFCVHAASKTVLDELQKNL-----ELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKR 492 (537)
Q Consensus 418 ~~gl~~y~pdf~~did~~~~H~~g~~vl~~l~~~L-----gl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~ 492 (537)
+|+++ +|||+|++||+|.++++.+.+.| |++++|+ ..++++||||+|||+|++|++++++|++++
T Consensus 285 -~gl~~------~DId~~v~Hq~n~~~~~~v~~~l~~~~~gl~~~k~---~~~~~~~GNt~sAsipi~L~~a~~~g~~~~ 354 (378)
T PRK06816 285 -RNLDP------DDIDYFLPHYSSEYFREKIVELLAKAGFMIPEEKW---FTNLATVGNTGSASIYIMLDELLNSGRLKP 354 (378)
T ss_pred -cCCCh------hhCCEEeeCcccHHHHHHHHHHHHhccCCCChhhe---EEeccccccccchHHHHHHHHHHHcCCCCC
Confidence 79987 99999999999999999999987 9999999 689999999999999999999999999999
Q ss_pred CCEEEEEEEchH-HHhhheeEEEe
Q 009313 493 GDRVWQIAFGSG-FKCNSVVWQAM 515 (537)
Q Consensus 493 Gd~VlliafGsG-~~~~s~v~r~~ 515 (537)
||+|++++.|+| |.++.+++.|+
T Consensus 355 Gd~vl~~~~~s~~~~~~~~~~~~~ 378 (378)
T PRK06816 355 GQKILCFVPESGRFSTAFMLLTVV 378 (378)
T ss_pred CCEEEEEEecccchhheeEEEEEC
Confidence 999999988776 99999999884
No 28
>PRK04262 hypothetical protein; Provisional
Probab=100.00 E-value=2.4e-41 Score=354.00 Aligned_cols=312 Identities=18% Similarity=0.248 Sum_probs=235.3
Q ss_pred CceEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeEEccCCccccccccchhhhhhhhHHH
Q 009313 121 RSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASM 200 (537)
Q Consensus 121 ~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~p~~~~~ma~~~~ea~~ 200 (537)
+.++|.+++.|+|+ ++++++++.+..+. ++ +++.+++||.+|+++++++ ...+|
T Consensus 1 ~~v~I~~~g~ylP~--~~v~~~el~~~~~~----~~------~~i~~~~Gi~~R~~~~~~~-----~~~~l--------- 54 (347)
T PRK04262 1 MMVGIVGYGAYIPR--YRIKVEEIARVWGD----DP------EAIKRGLGVEEKSVPGPDE-----DTATI--------- 54 (347)
T ss_pred CceeEEEEEEeCCC--EEecHHHHHHHhCc----CH------HHHhhccCeeeeecCCCCc-----CHHHH---------
Confidence 35899999999999 99999999988753 44 3688999999999987654 24556
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCC
Q 009313 201 VMFGALDELFEKTKVRPKDVGILVVNCS-IFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPN 279 (537)
Q Consensus 201 l~~~Aa~~aL~~agi~~~dId~LI~~ss-~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~ 279 (537)
+.+|++++|+++|++++|||.||++|+ +++..|+.+.+|++++|+++++.+++++ +||++++.||.+|.+++++|+.
T Consensus 55 -a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~~~dv~-~~C~~~~~aL~~A~~~i~sg~~ 132 (347)
T PRK04262 55 -AVEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDLTAADLE-FACKAGTAALQAAMGLVKSGMI 132 (347)
T ss_pred -HHHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCceEEEHH-HhHHHHHHHHHHHHHHHHcCCC
Confidence 599999999999999999999998764 5778899999999999998678999998 7999999999999999999999
Q ss_pred CeEEEEEecccccccCCCCCcCCCccccccccceEEEEEeccCccccccceeeeeEEEEEeccCCCccccceeccccccc
Q 009313 280 NYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVYQEEDEQGF 359 (537)
Q Consensus 280 ~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~t~~~sd~~~~~~v~~~~d~~G~ 359 (537)
++||||++|.... ++.++. ...|||||+|+||++++. ..++.+.. ...+|+ .+.+..+
T Consensus 133 ~~aLVv~~e~~~~---~~~~~~----~~~~GDGA~A~ll~~~~~-----~~~i~~~~--~~~~d~--~d~~~~~------ 190 (347)
T PRK04262 133 KYALAIGADTAQG---APGDAL----EYTAAAGGAAFIIGKEEV-----IAEIEATY--SYTTDT--PDFWRRE------ 190 (347)
T ss_pred CEEEEEEEeeecc---CCCCCC----CCcCCCCcEEEEEecCcc-----cceeeccc--cccccc--hhhcCCC------
Confidence 9999999998422 223433 245799999999997432 12332211 011221 1111100
Q ss_pred cccccchhhhhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccEEEEcC
Q 009313 360 RGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVHA 439 (537)
Q Consensus 360 ~g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H~ 439 (537)
|... +.. +.. .. ..| .+...+....++++++ +|+++ +|||+|++||
T Consensus 191 -~~~~----~~~-~~~----~~-~~~-------~~~~~~~~~i~~~L~~----------~gl~~------~dId~~v~Hq 236 (347)
T PRK04262 191 -GEPY----PRH-GGR----FT-GEP-------AYFKHIISAAKGLMEK----------LGLKP------SDYDYAVFHQ 236 (347)
T ss_pred -CCcC----CCc-Cce----ec-chH-------HHHHHHHHHHHHHHHH----------hCcCH------HHhceeecCC
Confidence 0000 000 000 00 000 0000111223455554 78886 9999999999
Q ss_pred CCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEchHHHhhheeEEEeccCC
Q 009313 440 ASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCNSVVWQAMRRVK 519 (537)
Q Consensus 440 ~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~~~~~~ 519 (537)
+|+++++.+++.||++++++..+. ++++||||||||+|+.|+++++ ++++||+|++++||+|+++.+.+||+.....
T Consensus 237 ~n~~~~~~~~~~Lgl~~ek~~~~~-~~~~~GNt~sAsi~~~L~~~~~--~~~~Gd~vll~~~G~G~~~~~~~~~~~~~~~ 313 (347)
T PRK04262 237 PNGKFPLRVAKMLGFTKEQVKPGL-LTPYIGNTYSGSALLGLAAVLD--VAKPGDRILVVSFGSGAGSDAFSITVTDAIE 313 (347)
T ss_pred CchHHHHHHHHHcCCCHHHhhccc-hhhhhCChHHHHHHHHHHHHHH--hCCCCCEEEEEecCCCcceeeEEEEechhHH
Confidence 999999999999999999996443 6899999999999999999987 4899999999999999999999999976654
No 29
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=3.6e-40 Score=348.18 Aligned_cols=347 Identities=15% Similarity=0.215 Sum_probs=238.7
Q ss_pred ceEEEEEeEEeCCCCcccCHHHHHHHHhcc-CCCChhh---H----------HHHHHHHHHcCCceeEEccCCc----cc
Q 009313 122 SVYLVDFACYRPSDDLKVTREQFIEVAGKW-SKSDEAS---L----------DFQRRIMKSSGIGDETYIPKVV----MS 183 (537)
Q Consensus 122 ~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~-~~~~~~~---~----------~f~~~i~~~sGI~~r~~~~~~~----~~ 183 (537)
+|+|+++|+|+|+ ++++|+++.+.++.. .+|.++. + .-.++|.+++||++|++..+.. ..
T Consensus 2 ~~~I~~~g~~lP~--~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~ 79 (372)
T PRK07515 2 NVVISGTGLYTPP--ESISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKSRYVMDKEGILDPDR 79 (372)
T ss_pred CcEEEEEEeecCC--ccccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCceEEEecccccCcccc
Confidence 6899999999999 899999998875321 1111000 0 0125788999999999985421 00
Q ss_pred cc-cccchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCccHHHHHHHHcCCCCCeeEEEecCccch
Q 009313 184 AE-ENCMTMKHGRLEASMVMFGALDELFEKTKVRPKDVGILVVNCS-IFNPTPSLSAMIINHYKMRGNIISYNLGGMGCS 261 (537)
Q Consensus 184 ~p-~~~~~ma~~~~ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss-~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs 261 (537)
.+ ............+.+++..|+++||+++|++++|||.||++|+ +++..|+.+.+|++.||++ ..+++++ ++|+
T Consensus 80 ~~~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~--~~~~~v~-~aCa 156 (372)
T PRK07515 80 MRPRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIE--GFAFDMN-VACS 156 (372)
T ss_pred cCcccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCC--CcEEEec-chhH
Confidence 00 0000111111245689999999999999999999999998865 5778999999999999996 5889999 7999
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEEEecccccccCCCCCcCCCccccccccceEEEEEeccCccccccceeeeeEEEEEec
Q 009313 262 AGVIGVDLARDMLQANPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTG 341 (537)
Q Consensus 262 ~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~t~~~ 341 (537)
+++.||.+|.++|++|..++||||++|.++. +.++.|++ +..+|||||+|+||++.+....+..+++.+. ...
T Consensus 157 sg~~al~~A~~~i~~g~~~~vLvv~~e~~s~-~~~~~d~~---~~~lfGDgAaA~vL~~~~~~~~~~~~~il~~---~~~ 229 (372)
T PRK07515 157 SATFGIQTAANAIRSGSARRVLVVNPEICSG-HLNFRDRD---SHFIFGDVATAVIVERADTATSAGGFEILGT---RLF 229 (372)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEeeecccc-cccccCCC---CCEEecCccEEEEEeeccccccCCCceEEEE---Eee
Confidence 9999999999999999999999999999887 33445665 4689999999999998654322223444432 222
Q ss_pred cCCCccccceeccccccccccccchhhhhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCC
Q 009313 342 ADDRSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLAST 421 (537)
Q Consensus 342 sd~~~~~~v~~~~d~~G~~g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl 421 (537)
++ ..+.+..+. |. +.....+-+... ..++...|+.++. + ....+....++++++ +|+
T Consensus 230 ~~--~~~~~~~~~---G~-~~~~~~~~~~~~----~~~~~~~g~~~~~--~-~~~~~~~~i~~~L~~----------~gl 286 (372)
T PRK07515 230 TQ--FSNNIRNNF---GF-LNRADPEGIGAR----DKLFVQEGRKVFK--E-VCPMVAEHIVEHLAE----------NGL 286 (372)
T ss_pred cc--cccceecCC---CC-CCCCCccccccc----cceEEeccHHHHH--H-HHHHHHHHHHHHHHH----------cCC
Confidence 22 112111110 10 000011000000 0111212222110 0 000111123444443 899
Q ss_pred CCCCcCccccccEEEEcCCCHHHHHHHHHH-cCCC--hhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEE
Q 009313 422 KPYIPDYKLAFEHFCVHAASKTVLDELQKN-LELS--EKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQ 498 (537)
Q Consensus 422 ~~y~pdf~~did~~~~H~~g~~vl~~l~~~-Lgl~--~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd~Vll 498 (537)
++ +|||+|++||+|+++++.+.+. ||++ +++. +.++++||||+|+|+++.|+++. +++++||+|++
T Consensus 287 ~~------~dId~~~~Hq~~~~~~d~~~~~llg~~~~~~~~---~~~~~~~GNt~sasi~~~L~~~~--~~~~~Gd~vll 355 (372)
T PRK07515 287 TP------ADVKRFWLHQANINMNQLIGKKVLGRDATPEEA---PVILDEYANTSSAGSIIAFHKHS--DDLAAGDLGVI 355 (372)
T ss_pred CH------HHCCEEEECCCCHHHHHHHHHHhccCCCChhhc---eEeHHhcCCchhhHHHHHHHHHh--ccCCCCCEEEE
Confidence 97 9999999999999999999988 5654 4444 68999999999999999999874 56899999999
Q ss_pred EEEchHHHhhheeEEE
Q 009313 499 IAFGSGFKCNSVVWQA 514 (537)
Q Consensus 499 iafGsG~~~~s~v~r~ 514 (537)
++||+|++|+++++|.
T Consensus 356 ~~~G~G~~~~~~ll~~ 371 (372)
T PRK07515 356 CSFGAGYSIGSVIVRK 371 (372)
T ss_pred EEecccHHHHHHHhcc
Confidence 9999999999999874
No 30
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=100.00 E-value=1.6e-40 Score=347.60 Aligned_cols=316 Identities=16% Similarity=0.240 Sum_probs=235.4
Q ss_pred eEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeEEccCCccccccccchhhhhhhhHHHHH
Q 009313 123 VYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMVM 202 (537)
Q Consensus 123 v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~p~~~~~ma~~~~ea~~l~ 202 (537)
+.|.++++|+|+ ++++|+++.+..+. +++ ++.+++||++|+++++++ ...+| +
T Consensus 2 ~~I~g~g~~lP~--~~v~n~~l~~~~~~----~~~------~i~~~~Gi~~r~v~~~~~-----~~~~l----------a 54 (345)
T TIGR00748 2 AGIVGYGAYIPM--YRIKVEEIARVWGK----DPE------SISNGLPVEEKAVPGLDE-----DTATI----------G 54 (345)
T ss_pred ccEEEEEEeCCC--eeecHHHHHHHhCC----CHh------HeeeccceeeeecCCCCC-----CHHHH----------H
Confidence 679999999999 99999999887652 343 678899999999987665 34566 4
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEecc-CCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCCCe
Q 009313 203 FGALDELFEKTKVRPKDVGILVVNCS-IFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNY 281 (537)
Q Consensus 203 ~~Aa~~aL~~agi~~~dId~LI~~ss-~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~~ 281 (537)
.+|+++||+++|++++|||.||++|+ +++..|+.+..|++++|+++++.++|++ .||+|++.||.+|.+++++|..++
T Consensus 55 ~~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~~~~~dv~-~aC~g~~~al~~A~~~i~sg~~~~ 133 (345)
T TIGR00748 55 VEAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDLTAADLE-FACKAGTAGIQACMGLVASGMIKY 133 (345)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHHHHcCCCCCceEEEHH-HhHHHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999998764 5677899999999999997678999999 699999999999999999999999
Q ss_pred EEEEEecccccccCCCCCcCCCccccccccceEEEEEeccCccccccceeeeeEEEEEeccCCCccccceeccccccccc
Q 009313 282 AVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVYQEEDEQGFRG 361 (537)
Q Consensus 282 aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~t~~~sd~~~~~~v~~~~d~~G~~g 361 (537)
||||++|..+.. ..|+. ...|||||+|+||++.+.. .++.+.. ...+|+. +. .... +
T Consensus 134 vLVv~~d~~~~~---~~~~~----~~~~GDGAaA~vl~~~~~~-----~~~~~~~--~~~~d~~--~~-~~~~---~--- 190 (345)
T TIGR00748 134 GLAIGADTAQGA---PGDAL----EYTAGAGGAAYIIGEKNTV-----AYFEGTY--SYTTDTP--DF-WRRE---G--- 190 (345)
T ss_pred EEEEEEeecccC---CCccC----cccCCCceEEEEEccCCcc-----eEeeccc--ceecccc--cc-cccC---C---
Confidence 999999997642 23432 2568999999999965421 1221111 1112211 00 0000 0
Q ss_pred cccchhhhhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccEEEEcCCC
Q 009313 362 LKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVHAAS 441 (537)
Q Consensus 362 ~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H~~g 441 (537)
... +...++ ..+. .+-+++.. ...++++++ +|+++ +|||+|++||+|
T Consensus 191 ~~~----~~~~~~-------~~~~-----~~~~~~~~-~~~~~~L~~----------~gl~~------~did~~i~Hq~~ 237 (345)
T TIGR00748 191 EPY----PRHGGR-------FTGE-----PAYFHHVV-TAAKGLMEK----------LGLTP------EDFDYAVFHQPN 237 (345)
T ss_pred CcC----CCcCCe-------ecCh-----HHHHHHHH-HHHHHHHHH----------cCCCH------HHcCEEEeCCCC
Confidence 000 000000 0000 00011111 223455554 78887 999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEchHHHhhheeEEEeccCCCC
Q 009313 442 KTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCNSVVWQAMRRVKKP 521 (537)
Q Consensus 442 ~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~~~~~~~~ 521 (537)
.++++.+.+.||++++++..+ ...++||||+|+|+|+.|+++++ ++++||+|++++||+|++|++++|+|.+....
T Consensus 238 ~~~~~~~~~~lgl~~ek~~~~-~~~~~~GNt~sAsipl~L~~~~~--~~~~Gd~vll~~~G~G~s~~~~~~~~~~~~~~- 313 (345)
T TIGR00748 238 GKFYLVAARMLGFPKEQVKPG-LLTPRIGNTYSGATPVGLSAVLD--IAEPGDRILAVSYGSGAGSDAFSIVVQDAIEE- 313 (345)
T ss_pred hHHHHHHHHHcCCCHHHeecc-ccccccCchhhhHHHHHHHHHHH--hcCCCCEEEEEEecCCcceeEEEEEEchhHHH-
Confidence 999999999999999999421 12489999999999999999886 68999999999999999999999999866543
Q ss_pred CCCCcc
Q 009313 522 ARNPWL 527 (537)
Q Consensus 522 ~~~~w~ 527 (537)
..||.
T Consensus 314 -~~~~~ 318 (345)
T TIGR00748 314 -KRDLA 318 (345)
T ss_pred -Hhhhh
Confidence 23685
No 31
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=100.00 E-value=2.6e-38 Score=326.30 Aligned_cols=319 Identities=23% Similarity=0.311 Sum_probs=234.7
Q ss_pred ceEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeEEccCCccccccccchhhhhhhhHHHH
Q 009313 122 SVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMV 201 (537)
Q Consensus 122 ~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~p~~~~~ma~~~~ea~~l 201 (537)
.|+|.++++|+|+ ++++++++.+..+. + ++..++||++|++..+++ ...+|
T Consensus 1 ~v~I~~i~~~lP~--~~v~~~~~~~~~~~----~--------~~~~~~gi~~r~~~~~~~-----~~~~l---------- 51 (324)
T cd00827 1 DVGIEAIGAYLPR--YRVDNEELAEGLGV----D--------PGKYTTGIGQRHMAGDDE-----DVPTM---------- 51 (324)
T ss_pred CccEEEEEecCCc--eeecHHHHHHHhCC----C--------cceeeeecceeEecCCCC-----CHHHH----------
Confidence 4789999999999 99999999887653 1 467789999999976533 23445
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCCC
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVNCS-IFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNN 280 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ss-~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~ 280 (537)
+.+|++++|+++|++++|||.||++++ +....|+.+.+|++++|++ ++++++++ ++|++++.||.+|.++|++|..+
T Consensus 52 ~~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~ 129 (324)
T cd00827 52 AVEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLT-NAEAFDLK-QACYGGTAALQLAANLVESGPWR 129 (324)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCC-CCceeehh-hhhHHHHHHHHHHHHHHHcCCCC
Confidence 599999999999999999999998865 4555889999999999998 79999999 79999999999999999999999
Q ss_pred eEEEEEecccccccCCCCCcCCCccccccccceEEEEEeccCccccccceeeeeEEEEEeccCCCccccceecccccccc
Q 009313 281 YAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVYQEEDEQGFR 360 (537)
Q Consensus 281 ~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~t~~~sd~~~~~~v~~~~d~~G~~ 360 (537)
++|||++|.++.... ..++ ..++|||||+|+||++.+.. ..++ +..++..+++..+++.. +. .
T Consensus 130 ~vlvv~~e~~~~~~~-~~~~----~~~~~gdgaaA~ll~~~~~~---~~~~---i~~~~~~~~~~~~~~~~-~~-----~ 192 (324)
T cd00827 130 YALVVASDIASYLLD-EGSA----LEPTLGDGAAAMLVSRNPGI---LAAG---IVSTHSTSDPGYDFSPY-PV-----M 192 (324)
T ss_pred EEEEEEEHHhhhccc-CCCC----ccccccCceEEEEEecCccc---ccCC---ceeeeeecccccccCcc-ce-----e
Confidence 999999999887432 1222 35899999999999987642 1133 33445555655433110 00 0
Q ss_pred ccccchhhhhhhcccccccccccC--CCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccEEEEc
Q 009313 361 GLKVSKNIMEIGGDALKTNITTLG--PLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVH 438 (537)
Q Consensus 361 g~~ls~dl~~~~g~~lk~ni~~lg--p~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H 438 (537)
+.......-..... .+...+ ..+ ...... ...++++.+++. .+++ +|||+|++|
T Consensus 193 ~~~~~~~~~~~~~~----~~~~~~~~~~~------~~~~~~-~~~~~~~~~l~~------~~~~-------~~i~~~~~h 248 (324)
T cd00827 193 DGGYPKPCKLAYAI----RLTAEPAGRAV------FEAAHK-LIAKVVRKALDR------AGLS-------EDIDYFVPH 248 (324)
T ss_pred ccCCCcchhhhhhc----ceeecCCccch------HHHHhH-HHHHHHHHHHHH------cccc-------cccceeecc
Confidence 00000000000000 011101 000 001111 112233322221 4443 589999999
Q ss_pred CCCH-HHHHHHHHHcCCChhhhhhhhh-ccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEchHHHhhheeE
Q 009313 439 AASK-TVLDELQKNLELSEKNMEASRM-TLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCNSVVW 512 (537)
Q Consensus 439 ~~g~-~vl~~l~~~Lgl~~e~~~~S~~-~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~ 512 (537)
|+|+ .+++.+++.|+++++++.+++. ++++||||+|+|+++.|+++++++++++||+|++++||+|++++++++
T Consensus 249 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~~~~~~Gd~vl~~~~G~G~~~~~~~~ 324 (324)
T cd00827 249 QPNGKKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGLASLLESGKLKAGDRVLLFSYGSGFTAEAFVL 324 (324)
T ss_pred CchHHHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHHHHHHHhcCCCCCCCEEEEEEeccchhheeccC
Confidence 9999 9999999999999999987664 899999999999999999999999999999999999999999998864
No 32
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=100.00 E-value=1.8e-34 Score=305.61 Aligned_cols=307 Identities=15% Similarity=0.242 Sum_probs=221.3
Q ss_pred eEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeEEccCCccccccccchhhhhhhhHHHHH
Q 009313 123 VYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMVM 202 (537)
Q Consensus 123 v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~p~~~~~ma~~~~ea~~l~ 202 (537)
|.|.+++.|+|+ ++++++++.+..+. ++ +|+....|++++++.++++. ..+| +
T Consensus 1 iGI~~i~~y~P~--~~v~~~ela~~~g~----~~------~~~~~g~G~~~~~~~~~~ed-----~~~l----------a 53 (379)
T TIGR01835 1 IGIDKISFFTPQ--NYLDMTALAEARGV----DP------EKFHIGIGQKKMAVPPIDED-----IVTM----------A 53 (379)
T ss_pred CCEeEEEEECCC--EEeeHHHHHHHhCC----CH------HHHHhhcCceEEeeCCCCCC-----HHHH----------H
Confidence 579999999999 99999999987652 44 36778899999988776642 3466 4
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEec-cCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCCCe
Q 009313 203 FGALDELFEKTKVRPKDVGILVVNC-SIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNY 281 (537)
Q Consensus 203 ~~Aa~~aL~~agi~~~dId~LI~~s-s~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~~ 281 (537)
.+|++++|+++ ++++||.||++| ++++..|+.+..|++.||+++++.++|+. ++|+|++.||.+|.+++++++.++
T Consensus 54 ~~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~~~~~~dv~-~aC~gg~~aL~~A~~~i~s~~~~~ 130 (379)
T TIGR01835 54 ASAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFCRSFELK-QACYGATAALQMAKGHVALSPDRK 130 (379)
T ss_pred HHHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEec-cccHHHHHHHHHHHHHHHcCCCCe
Confidence 99999999998 899999999886 45777899999999999998789999999 799999999999999999999999
Q ss_pred EEEEEecccccccCCCCCcCCCccccccccceEEEEEeccCccccccceeeeeEE-EEEeccCCCccccceecccccccc
Q 009313 282 AVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIV-RTHTGADDRSFRSVYQEEDEQGFR 360 (537)
Q Consensus 282 aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v-~t~~~sd~~~~~~v~~~~d~~G~~ 360 (537)
||||++|+.... . .+. ...+|||||+|+||++++. +..+. .+...+++. ++ .+.+. +
T Consensus 131 aLVv~~D~a~~~--~-~~~----~~~~~GdGA~A~Ll~~~~~--------i~~~~~~~~~~t~~~-~d-f~~p~---~-- 188 (379)
T TIGR01835 131 VLVIASDIAKYG--L-ESP----GEPTQGAGAVAMLVSADPK--------LLAINEDSVLYTDDI-MD-FWRPN---Y-- 188 (379)
T ss_pred EEEEEeehhhcc--c-CCC----CCccccCccEEEEEecCCC--------eeEEeccceeeecCC-CC-ccCCC---C--
Confidence 999999985331 1 111 2367999999999997542 11111 111112211 11 11111 0
Q ss_pred ccccchhhhhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccEEEEcCC
Q 009313 361 GLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVHAA 440 (537)
Q Consensus 361 g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H~~ 440 (537)
.+.+.+. |+. +.+ .++.. ..++++..+++ .|+++ +|||+||+||+
T Consensus 189 -----~~~~~v~-----------g~~----s~~--~y~~~-~~~~~~~~l~~------~g~~~------~did~~i~H~p 233 (379)
T TIGR01835 189 -----STTALVD-----------GQY----SNE--QYLNA-FENAWNDYAKR------TGLSL------ADFAAFCFHVP 233 (379)
T ss_pred -----CCceeEC-----------cHH----HHH--HHHHH-HHHHHHHHHHH------hCCCH------HHcCEEEECCC
Confidence 0001111 111 100 12211 12233322221 78876 99999999999
Q ss_pred CHHH----HHHHHHHcCCCh-hhh----hhhhhccccccccccchHHHHHHHHHHcC-CCCCCCEEEEEEEchHHHhhhe
Q 009313 441 SKTV----LDELQKNLELSE-KNM----EASRMTLHRFGNTSSSSIWYELAYLEAKE-RVKRGDRVWQIAFGSGFKCNSV 510 (537)
Q Consensus 441 g~~v----l~~l~~~Lgl~~-e~~----~~S~~~l~r~GNtsSaSi~~~La~~~~~g-~l~~Gd~VlliafGsG~~~~s~ 510 (537)
+.++ ++.+.+.++++. +++ ++|+.+.+++|||+|+|+++.|+.+++.+ ++++||+|++++||+|+.....
T Consensus 234 ~~~~~~k~~~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~l~~~~~~~~Gd~ill~s~GsG~~ae~~ 313 (379)
T TIGR01835 234 FTKMGLKALRHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLYLGLASLLENAFEDTTGDKIGLFSYGSGAVAEFF 313 (379)
T ss_pred CCcHHHHHHHHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHHHHhcccCCCCCEEEEEEecCCcceeeE
Confidence 7766 345667778773 333 35667899999999999999999999885 7999999999999999877766
Q ss_pred eEEEec
Q 009313 511 VWQAMR 516 (537)
Q Consensus 511 v~r~~~ 516 (537)
..+...
T Consensus 314 ~~~~~~ 319 (379)
T TIGR01835 314 SGTLVA 319 (379)
T ss_pred EEEEcc
Confidence 666543
No 33
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=100.00 E-value=2.8e-32 Score=292.63 Aligned_cols=316 Identities=16% Similarity=0.273 Sum_probs=220.9
Q ss_pred CCCceEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeEEc--cCCccccccccchhhhhhh
Q 009313 119 RPRSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYI--PKVVMSAEENCMTMKHGRL 196 (537)
Q Consensus 119 ~~~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~--~~~~~~~p~~~~~ma~~~~ 196 (537)
+|++|.|.++|.|+|+ ++|+++++.++.+. +++ |+ ++||++|++. ++++ ...+|+
T Consensus 1 ~~~~vgI~gig~Y~P~--~~v~n~eLa~~~g~----~~~------~~--~~GI~~r~~ava~~~E-----d~~tmA---- 57 (459)
T PLN02577 1 MPKNVGILAMEVYFPP--TCVQQEALEAHDGV----SKG------KY--TIGLGQDCMAFCTDVE-----DVISMS---- 57 (459)
T ss_pred CCCccEEEEEEEeCCC--eEEcHHHHHHHhCC----CHH------HH--hhccceeEeccCCCCC-----CHHHHH----
Confidence 4788999999999999 99999999988653 454 44 6899999874 3433 345664
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCccHHHHHH---HHcCCCCCeeEEEecCccchHHHHHHHHHHH
Q 009313 197 EASMVMFGALDELFEKTKVRPKDVGILVVNC-SIFNPTPSLSAMII---NHYKMRGNIISYNLGGMGCSAGVIGVDLARD 272 (537)
Q Consensus 197 ea~~l~~~Aa~~aL~~agi~~~dId~LI~~s-s~~~~~Ps~a~~I~---~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~ 272 (537)
+.|++++|+++|++|++||.||++| ++++..|+.+..|+ +++|.+ ++.+||++ .+|+||+.||.+|.+
T Consensus 58 ------~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~-~~~afDi~-~AC~G~~~AL~~A~~ 129 (459)
T PLN02577 58 ------LTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNT-DIEGVDST-NACYGGTAALLNCVN 129 (459)
T ss_pred ------HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCC-CcEEeehh-hhhHHHHHHHHHHHH
Confidence 9999999999999999999999997 45678999999886 678876 79999999 799999999999999
Q ss_pred HHHcCC--CCeEEEEEecccccccCCCCCcCCCccccccccceEEEEEeccCccccccceeeeeEEEEEe-ccCCCcccc
Q 009313 273 MLQANP--NNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHT-GADDRSFRS 349 (537)
Q Consensus 273 lL~~g~--~~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~t~~-~sd~~~~~~ 349 (537)
+++++. .++||||++|+.+... .+ .+ ..+||||+|+||+.++.. .+.... ++.......
T Consensus 130 ~i~sg~~~~~~aLVV~aD~a~~~~-~~-~e------~t~GdGA~A~lv~~~~~~----------~l~~~~~g~~~~~~~D 191 (459)
T PLN02577 130 WVESSSWDGRYGLVVAADSAVYAE-GP-AR------PTGGAGAVAMLVGPNAPI----------VFESKYRGSHMAHVYD 191 (459)
T ss_pred HHHcCCCCCCeEEEEEechhhccC-CC-CC------CCCCcceEEEEEccCCCc----------eeecccccccCcccch
Confidence 999986 4999999999966522 11 22 346999999999864421 111111 111111111
Q ss_pred ceeccccccccccccchhhhhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCcc
Q 009313 350 VYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYK 429 (537)
Q Consensus 350 v~~~~d~~G~~g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~ 429 (537)
++.|... .+ .....|+.++ .+++..+ .++++...++......+|++.
T Consensus 192 f~rP~~~---------~~-----------~~~vdG~~s~------~~yl~~~-~~~~~~~~~k~~~~~~~g~~~------ 238 (459)
T PLN02577 192 FYKPDLA---------SE-----------YPVVDGKLSQ------TCYLMAL-DSCYKRFCEKYEKLEGKQFSI------ 238 (459)
T ss_pred hcccCCC---------CC-----------ceEEcchHHH------HHHHHHH-HHHHHHHHHHhhcccccCCCH------
Confidence 2222110 01 1122333221 1222221 223332222211110135665
Q ss_pred ccccEEEEcCCCHHHHHHHHHHcCCC----------------------------------------------hhhhhhhh
Q 009313 430 LAFEHFCVHAASKTVLDELQKNLELS----------------------------------------------EKNMEASR 463 (537)
Q Consensus 430 ~did~~~~H~~g~~vl~~l~~~Lgl~----------------------------------------------~e~~~~S~ 463 (537)
+|||+||+||+..++.....+.|.+. .+|++||.
T Consensus 239 ~d~d~~vfHqP~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~ 318 (459)
T PLN02577 239 SDADYFVFHAPYNKLVQKSFARLVYNDFQRNASSVDEDAKEKLAPFAGLSSDESYQNRDLEKVSQQVAKPLYDAKVQPTT 318 (459)
T ss_pred HHcCEEEecCCccchhHHHHHHHhhhhhhhccccccchhhhccccccccchhhccccchHHHHHHHhhHHHHHHhhccHh
Confidence 89999999999777776655444311 26777787
Q ss_pred hccccccccccchHHHHHHHHHHcCC-CCCCCEEEEEEEchHHHhhheeEEEec
Q 009313 464 MTLHRFGNTSSSSIWYELAYLEAKER-VKRGDRVWQIAFGSGFKCNSVVWQAMR 516 (537)
Q Consensus 464 ~~l~r~GNtsSaSi~~~La~~~~~g~-l~~Gd~VlliafGsG~~~~s~v~r~~~ 516 (537)
..-++.||+.++|++..|..+++... ..+|+||.++++|||.......++...
T Consensus 319 ~~~~~vGN~YTaSlyl~L~SlL~~~~~~~~G~rIg~fSYGSG~~se~fs~~v~~ 372 (459)
T PLN02577 319 LIPKQVGNMYTASLYAALASLVHNKHSELAGKRILMFSYGSGLTATMFSLRLHE 372 (459)
T ss_pred HHHHhcCcccchHHHHHHHHHHhhccccCCCCEEEEEeecCCccceeEEEEEeC
Confidence 78889999999999999999997642 459999999999999877777776654
No 34
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=99.97 E-value=1.4e-30 Score=254.91 Aligned_cols=204 Identities=23% Similarity=0.324 Sum_probs=162.5
Q ss_pred hcCCCceEEEEEeEEeCCCCcccCHHHHHHHHhccCCCCh--hhHHHHHHHHHHcCCceeEEccCCccc----------c
Q 009313 117 MSRPRSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDE--ASLDFQRRIMKSSGIGDETYIPKVVMS----------A 184 (537)
Q Consensus 117 ~~~~~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~--~~~~f~~~i~~~sGI~~r~~~~~~~~~----------~ 184 (537)
.+.+.+.+|+++|+..|+ ++++++++.+.+.+.-..++ +..+++++|++++||++|+..-+.+.. .
T Consensus 9 ~~~~g~A~Il~IgTA~P~--~~~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~~~~~~ 86 (226)
T PF00195_consen 9 QRSPGPAYILSIGTAVPP--HRITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSFWDFAD 86 (226)
T ss_dssp HS-SSSEEEEEEEEE-SS--EEEEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SEEEESS-HHHHHTSGGGHSSSS
T ss_pred ccCCCCeEEEEEEEeCCC--ceecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccceeccccchhhhhcCcchhhccC
Confidence 456788999999999999 99999999887533222232 345678899999999999876432110 1
Q ss_pred ccccchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHH
Q 009313 185 EENCMTMKHGRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGV 264 (537)
Q Consensus 185 p~~~~~ma~~~~ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl 264 (537)
|.....|+.+.+++.+++.+|++++|+++|++++|||+||+.|+++...|++..+|+++|||++++..+.|.||||+||+
T Consensus 87 ps~~~R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~ 166 (226)
T PF00195_consen 87 PSLAERNALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRTPIFGMGCAGGA 166 (226)
T ss_dssp S-HHHHHHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEEEEES-GGGHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEEEEeccchhhHH
Confidence 11123577889999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEEEecccccccCCCC--CcCCCccccccccceEEEEEeccC
Q 009313 265 IGVDLARDMLQANPNNYAVVVSTEMVGYNWYAGR--DRSMMIPNCFFRMGCSAILMSNRR 322 (537)
Q Consensus 265 ~AL~lA~~lL~~g~~~~aLVVs~E~~S~~~~~~~--dr~~ll~~~lfgDGAAAvLLs~~~ 322 (537)
.+|..|+++.++++..+||||++|.+|.+|..++ +++.++.++||||||||+||+.+|
T Consensus 167 ~~L~~A~~~~~~~p~a~VLvv~vElcsl~~~~~~~~~~~~lv~~aLFgDGaAA~vv~~dP 226 (226)
T PF00195_consen 167 AGLRRAKDIARANPGARVLVVCVELCSLHFQAPNDDSLDNLVANALFGDGAAAVVVGADP 226 (226)
T ss_dssp HHHHHHHHHHHHSTT-EEEEEEEEEGGGTHHHCCTTSHHHHHHHHHB-EEEEEEEEESS-
T ss_pred HHHHHHHHHHhCCccceEEEEEEEeeEEEEecCCcccHHHHhHHhhhcCCceEEEEccCC
Confidence 9999999999999999999999999998776433 467788999999999999999764
No 35
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=99.97 E-value=2.1e-29 Score=260.08 Aligned_cols=312 Identities=17% Similarity=0.288 Sum_probs=236.7
Q ss_pred ceEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeEEccCCccccccccchhhhhhhhHHHH
Q 009313 122 SVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMV 201 (537)
Q Consensus 122 ~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~p~~~~~ma~~~~ea~~l 201 (537)
.+.|++++.|.|. +++..+++.+.-+. ++ +++..-+|++++.+.+.++ ...+|+
T Consensus 2 ~iGI~~~g~y~p~--~~i~~~ela~~~g~----d~------~k~~~gl~~~e~sv~~~~E-----D~vTma--------- 55 (377)
T COG3425 2 MIGIVGIGAYIPR--YRIKLEELARAWGV----DP------EKIKKGLGVEEKSVPPWDE-----DAVTMA--------- 55 (377)
T ss_pred ccccceEEEeccc--eEeeHHHHHhhcCC----Ch------HHhhhccccccccCCCCch-----hHHHHH---------
Confidence 5889999999999 99999999877542 34 3688889999998887765 355675
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCCC
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVNCS-IFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNN 280 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ss-~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~ 280 (537)
++||+++|++.++||++|+.|+++|. ..+..-+.+..|++.||+.+++.++|+. .+|-+|..||+.|.+++.+++.+
T Consensus 56 -veAA~~~l~r~~~D~~~Ig~v~vgTES~~d~~K~~at~v~~~lg~~~~~~~~d~~-~AC~agT~aL~~a~~~v~s~~~~ 133 (377)
T COG3425 56 -VEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATIVAEALGLNPSARAADVE-FACYAGTAALQAAIGWVESGMIS 133 (377)
T ss_pred -HHHHHHHHhccCCCHHHCceEEEecCCCcccccchHHHHHHHhCCCCceehhhHH-HHHHHHHHHHHHHHHHHHcCCcc
Confidence 99999999999999999999999974 4666788999999999999999999999 69999999999999999999999
Q ss_pred eEEEEEecccccccCCCCCcCCCccccccccceEEEEEeccCccccccceeeeeEEEEEeccCCCccccceecccccccc
Q 009313 281 YAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVYQEEDEQGFR 360 (537)
Q Consensus 281 ~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~t~~~sd~~~~~~v~~~~d~~G~~ 360 (537)
++|||++|+.-. ...+.- -...|+||+|+|++..+.. -..+.. +...+++. + ..+++++.
T Consensus 134 ~~LvI~sD~a~~---~~~~~~----E~t~GAGavA~lIg~n~~~----~a~~~~---~~syt~d~-~-DFwRp~~~---- 193 (377)
T COG3425 134 YGLVIGADTAQY---APGDAL----EYTAGAGAVAFLIGKNPPI----VAEFEG---TGSYTTDT-P-DFWRPDGQ---- 193 (377)
T ss_pred ceEEEeehhhcc---CCCccc----CccCCCceEEEEEccCCCe----EEEecC---ceEEecCC-C-cccccCCC----
Confidence 999999998422 222211 3568999999999975331 111111 11111111 1 12222211
Q ss_pred ccccchhhhhhhcccccccccccCCCccccchhhH-HHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccEEEEcC
Q 009313 361 GLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLF-FFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVHA 439 (537)
Q Consensus 361 g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~~-~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H~ 439 (537)
..|.+.|+ +|++.. ..+....++.+++ .++++ +|||++|+|+
T Consensus 194 ------~yp~~dg~---------------~s~~~Y~~~~~~a~~~~~~k----------~gls~------~dfdy~vfH~ 236 (377)
T COG3425 194 ------PYPYVDGR---------------FSEPAYFKHVENAAKGYMEK----------TGLSP------DDFDYIVFHQ 236 (377)
T ss_pred ------cccccCce---------------ecHHHHHHHHHHHHHHHHHH----------hCCCh------hhhCeEEecC
Confidence 11222221 122211 1111123444443 78887 9999999999
Q ss_pred CCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEchHHHhhheeEEEeccCC
Q 009313 440 ASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCNSVVWQAMRRVK 519 (537)
Q Consensus 440 ~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~~~~~~ 519 (537)
++.++-...++.++.+.+++.++....++.||+.|+|+++.|+.+++..+ .+||||++.+||+|......-.+....+.
T Consensus 237 P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~~a~-~~G~rIl~~SYGSGa~s~~fs~~v~~~~~ 315 (377)
T COG3425 237 PNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLDNAK-LPGDRILLFSYGSGAGSEAFSITVTDGIE 315 (377)
T ss_pred CCCchHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHHHHHHhhcC-CCCCEEEEEeeCCCcceeEEEEEecccHH
Confidence 99999999999999999999999888889999999999999999998766 79999999999999766666666655543
No 36
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=99.97 E-value=3.5e-29 Score=268.51 Aligned_cols=314 Identities=16% Similarity=0.252 Sum_probs=212.4
Q ss_pred ceEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeEE--ccCCccccccccchhhhhhhhHH
Q 009313 122 SVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETY--IPKVVMSAEENCMTMKHGRLEAS 199 (537)
Q Consensus 122 ~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~--~~~~~~~~p~~~~~ma~~~~ea~ 199 (537)
+|.|.+++.|+|+ ++++++++.++.+. +++ |+ .+||++|+. .++++ ...+|
T Consensus 1 ~vgI~~ig~y~P~--~~v~~~eLa~~~g~----~~~------k~--~~GI~~rr~av~~~~E-----d~~tm-------- 53 (454)
T TIGR01833 1 DVGILALEIYFPS--QYVDQAELEKYDGV----SAG------KY--TIGLGQTKMGFCTDRE-----DINSL-------- 53 (454)
T ss_pred CcEEEEEEEeCCC--eEEcHHHHHHhcCC----CHH------Hh--eechhheecccCCCCC-----CHHHH--------
Confidence 5899999999999 99999999887653 443 44 599999984 44443 34566
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCccHHHHHHHHc---CCCCCeeEEEecCccchHHHHHHHHHHHHHH
Q 009313 200 MVMFGALDELFEKTKVRPKDVGILVVNC-SIFNPTPSLSAMIINHY---KMRGNIISYNLGGMGCSAGVIGVDLARDMLQ 275 (537)
Q Consensus 200 ~l~~~Aa~~aL~~agi~~~dId~LI~~s-s~~~~~Ps~a~~I~~~l---Gl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~ 275 (537)
+..|++++|++++++|++||.||++| ++++..|+.+.+|++.| |.+ ++.+||+. ++|+|++.||.+|.++++
T Consensus 54 --a~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~sps~a~~v~~lL~~lG~~-~~~~fDi~-~AC~G~t~AL~~A~~~i~ 129 (454)
T TIGR01833 54 --CLTVVSKLMERYNIDYNQIGRLEVGTETIIDKSKSVKTVLMQLFEESGNT-DVEGIDTT-NACYGGTAALFNAINWIE 129 (454)
T ss_pred --HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCchHHHHHHHHHhcCCC-CceEEecc-ccchhHHHHHHHHHHHHH
Confidence 49999999999999999999999986 56888999999999955 454 89999999 799999999999999999
Q ss_pred cCC--CCeEEEEEecccccccCCCCCcCCCccccccccceEEEEEeccCccccccceeeeeEEEEEeccCCCccccceec
Q 009313 276 ANP--NNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVYQE 353 (537)
Q Consensus 276 ~g~--~~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~t~~~sd~~~~~~v~~~ 353 (537)
++. .++||||++|+.-. .+.+ ...++||||+|+||+.++.- .++. ++..++.....+.|+ |
T Consensus 130 s~~~~~~~aLVV~sDia~y-----~~~~---~~~t~GaGAvAmLv~~~~~~----~~~~-~~~~~~~~~~~DF~r----P 192 (454)
T TIGR01833 130 SSSWDGRYALVVAGDIAVY-----AKGN---ARPTGGAGAVAMLIGPNAPI----VFER-GLRGSHMQHAYDFYK----P 192 (454)
T ss_pred cCCcCCCeEEEEEeccccc-----cCCC---eeeccccceEEEEeccCccc----eecC-ccceEEEeecccccC----C
Confidence 985 59999999999322 2222 13578999999999976541 1111 011122221222222 2
Q ss_pred cccccccccccchhhhhhhcccccccccccCCCccccchhhHHHHHHH------HHHHHhhhhhhcccccccCCCCCCcC
Q 009313 354 EDEQGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLV------WRHLFSGSADKSRSSSLASTKPYIPD 427 (537)
Q Consensus 354 ~d~~G~~g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~------~r~vl~~a~~~~~~~~~~gl~~y~pd 427 (537)
.. ..+.|.+.|+ +|-+. ++..+ -++....+++..-. +.+..+
T Consensus 193 ~~---------~~~~p~vdg~---------------~S~~~--Yl~a~~~~y~~y~~~~~~a~~~~~~--~~~~~~---- 240 (454)
T TIGR01833 193 DL---------ASEYPVVDGK---------------LSIQC--YLSALDRCYKSYCKKIEKQWGKSGG--DRKFTL---- 240 (454)
T ss_pred CC---------CCcccccCCc---------------cCHHH--HHHHHHHHHHHHHHHHHHhhhhhcc--ccCCCH----
Confidence 10 0111222221 11110 11110 01111111111000 023443
Q ss_pred ccccccEEEEcCCCHHHHHHH-HHHc---------------------------------------------CCChhhhhh
Q 009313 428 YKLAFEHFCVHAASKTVLDEL-QKNL---------------------------------------------ELSEKNMEA 461 (537)
Q Consensus 428 f~~did~~~~H~~g~~vl~~l-~~~L---------------------------------------------gl~~e~~~~ 461 (537)
+|||++|+|++..++.... .+-+ +...+++.|
T Consensus 241 --~dfd~~~fH~P~~km~~ka~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~p 318 (454)
T TIGR01833 241 --NDFDYMVFHSPYCKLVQKSLARLLYNDFLRNPSSIDTALYEGLEALSTLKLEDTYFDRDLEKAFMKASKELFDKKTKP 318 (454)
T ss_pred --hHcCEEeccCCcccHHHHHHHHHHHhhhhhccccccchhhcccchhhccccccccchhhHHHHHHhhhhhhHHHhhcc
Confidence 8999999999976665543 2222 112367887
Q ss_pred hhhccccccccccchHHHHHHHHHHcCC--CCCCCEEEEEEEchHHHhhheeEEEecc
Q 009313 462 SRMTLHRFGNTSSSSIWYELAYLEAKER--VKRGDRVWQIAFGSGFKCNSVVWQAMRR 517 (537)
Q Consensus 462 S~~~l~r~GNtsSaSi~~~La~~~~~g~--l~~Gd~VlliafGsG~~~~s~v~r~~~~ 517 (537)
|...-++.||+.++|+++.|..+++..+ ...|+||.+++||||........+....
T Consensus 319 s~~~~~~vGN~YtaSlyl~L~Sll~~~~~~~~~g~ri~~fSYGSG~~se~fs~~v~~~ 376 (454)
T TIGR01833 319 SLLVPNQVGNMYTASLYGCLASLLSSKSAQELAGKRVGMFSYGSGLAASMFSLRVSQD 376 (454)
T ss_pred hhHHHHhcCchhhhHHHHHHHHHHhhCCccccCCCEEEEEeccCCcceeeEEEEEeCC
Confidence 7777779999999999999999997543 4579999999999998777777766653
No 37
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.96 E-value=5.3e-28 Score=240.53 Aligned_cols=238 Identities=18% Similarity=0.186 Sum_probs=185.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHc
Q 009313 198 ASMVMFGALDELFEKTKVRPKDVGILVVNCS-IFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQA 276 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~ss-~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~ 276 (537)
..+++.+|++++|+++|++++|||.||++++ +++..|+.+.+|++++|++ +.+++++. .+|++++.||++|.++|++
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~-~~~~~~i~-~~C~s~~~al~~A~~~i~~ 84 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYSVN-QACATGLTALALAVQQVQN 84 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCC-CCCcceec-cHhHHHHHHHHHHHHHHHC
Confidence 4566799999999999999999999999865 5666899999999999997 79999999 7999999999999999999
Q ss_pred CCCCeEEEEEecccccccCCCCCcCCCccccccccceEEEEEeccCccccccceeeeeEEEEEeccCCCccccceecccc
Q 009313 277 NPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVYQEEDE 356 (537)
Q Consensus 277 g~~~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~t~~~sd~~~~~~v~~~~d~ 356 (537)
+..+++||+++|. ++|||||+|+||++++....+....+..+.......++....
T Consensus 85 g~~~~~lv~~~e~-----------------~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~-------- 139 (254)
T cd00327 85 GKADIVLAGGSEE-----------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMV-------- 139 (254)
T ss_pred CCCCEEEEEecce-----------------eeecceEEEEEECcHHHHHHCCCceEEEEEEEEEcCCCCCCC--------
Confidence 9999999999998 579999999999986542211110011122211111111000
Q ss_pred ccccccccchhhhhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccEEE
Q 009313 357 QGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFC 436 (537)
Q Consensus 357 ~G~~g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~ 436 (537)
... ..+ ......++++++ +++++ +|+|+|+
T Consensus 140 -----~~~--------------------------~~~---~~~~~i~~~l~~----------ag~~~------~did~~~ 169 (254)
T cd00327 140 -----PAV--------------------------SGE---GLARAARKALEG----------AGLTP------SDIDYVE 169 (254)
T ss_pred -----CCC--------------------------ChH---HHHHHHHHHHHH----------cCCCH------HHCCEEE
Confidence 000 000 111224566665 78886 9999999
Q ss_pred EcCCCHHHHHHHHHHcCCChhhhh--hhhhccccccccccchHHHHHHHHHHcCCCC-------CCCEEEEEEEchHHHh
Q 009313 437 VHAASKTVLDELQKNLELSEKNME--ASRMTLHRFGNTSSSSIWYELAYLEAKERVK-------RGDRVWQIAFGSGFKC 507 (537)
Q Consensus 437 ~H~~g~~vl~~l~~~Lgl~~e~~~--~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~-------~Gd~VlliafGsG~~~ 507 (537)
+|+.+..+++.+++.+++++++.. +...+..+|||++++|.++.|.++.+..+.+ +||++++.++|.|+++
T Consensus 170 ~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~g~Gg~~ 249 (254)
T cd00327 170 AHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTN 249 (254)
T ss_pred ccCCcCccccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCCCCCcCEEEEeeEcCCCcc
Confidence 999999999999999999888774 3457889999999999999999998876665 8999999999999999
Q ss_pred hheeE
Q 009313 508 NSVVW 512 (537)
Q Consensus 508 ~s~v~ 512 (537)
+++++
T Consensus 250 ~~~~l 254 (254)
T cd00327 250 AAVVL 254 (254)
T ss_pred eEEEC
Confidence 98875
No 38
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.93 E-value=6.3e-26 Score=234.47 Aligned_cols=252 Identities=16% Similarity=0.135 Sum_probs=185.4
Q ss_pred HHHHHHHHHHHHHHhCCCC----CCCccEEEEeccC-CCC---------------------CccHHHHHHHHcCCCCCee
Q 009313 198 ASMVMFGALDELFEKTKVR----PKDVGILVVNCSI-FNP---------------------TPSLSAMIINHYKMRGNII 251 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~----~~dId~LI~~ss~-~~~---------------------~Ps~a~~I~~~lGl~~~~~ 251 (537)
..+++..|++++|+++|++ +++||.||++++. .+. .|+.+.+|+..+|++ .+
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--g~ 88 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIH--GP 88 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCCC--CC
Confidence 3456799999999999999 9999999988654 222 688899999999994 78
Q ss_pred EEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEecccccccCC----------CC--Cc--CCCccccccccceEEEE
Q 009313 252 SYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYNWYA----------GR--DR--SMMIPNCFFRMGCSAIL 317 (537)
Q Consensus 252 ~~~l~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~~~~----------~~--dr--~~ll~~~lfgDGAAAvL 317 (537)
+++++ ++|++++.||++|.++|+++..+++||+++|..+..+.. .. .+ +.....++|||||+|+|
T Consensus 89 ~~~v~-~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~v 167 (332)
T cd00825 89 AYDVS-AACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALV 167 (332)
T ss_pred ccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEE
Confidence 99999 799999999999999999999999999999987653221 00 00 11124689999999999
Q ss_pred EeccCccccc-c--ceeeeeEEEEEeccCCCccccceeccccccccccccchhhhhhhcccccccccccCCCccccchhh
Q 009313 318 MSNRRRDYHR-A--KYRLQLIVRTHTGADDRSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQL 394 (537)
Q Consensus 318 Ls~~~~~~~~-~--~~~L~~~v~t~~~sd~~~~~~v~~~~d~~G~~g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~ 394 (537)
|++.+....+ . ..++.+ .....++..... + .+ ..+
T Consensus 168 L~~~~~a~~~~~~~~~~i~~---~~~~~~~~~~~~-------------------~--------------~~----~~~-- 205 (332)
T cd00825 168 VEELEHALARGAHIYAEIVG---TAATIDGAGMGA-------------------F--------------AP----SAE-- 205 (332)
T ss_pred ECcHHHHHHCCCeEEEEEEE---EEEccCCCCCCC-------------------C--------------Cc----CHH--
Confidence 9976542111 0 112221 111122111000 0 00 000
Q ss_pred HHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccEEEEcCCCHHHHHHHHHHcCCChhhh--hhhhhcccccccc
Q 009313 395 FFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVHAASKTVLDELQKNLELSEKNM--EASRMTLHRFGNT 472 (537)
Q Consensus 395 ~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H~~g~~vl~~l~~~Lgl~~e~~--~~S~~~l~r~GNt 472 (537)
.+....++++++ +++++ +|||++++|+.|+.+.+.+++.++++.++. .+...+..+|||+
T Consensus 206 --~~~~~i~~al~~----------agl~~------~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~ 267 (332)
T cd00825 206 --GLARAAKEALAV----------AGLTV------WDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNL 267 (332)
T ss_pred --HHHHHHHHHHHH----------cCCCH------hHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccc
Confidence 111224566665 88987 999999999999999999999988876642 1225788999999
Q ss_pred ccchHHHHHHHHHHcCCCC-------------------------CCCEEEEEEEchHHHhhheeE
Q 009313 473 SSSSIWYELAYLEAKERVK-------------------------RGDRVWQIAFGSGFKCNSVVW 512 (537)
Q Consensus 473 sSaSi~~~La~~~~~g~l~-------------------------~Gd~VlliafGsG~~~~s~v~ 512 (537)
+++|.++.|+.+....+.+ +||++++++||.|.+++++|+
T Consensus 268 ~aas~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 268 SSAAVVLAVDEAVLMLEHGFIPPSIHIEELDEAGLNIVTETTPRELRTALLNGFGLGGTNATLVL 332 (332)
T ss_pred hhHhHHHHHHHHHHHHhcCccCCCCCCCCCCcccCcccCCCCCCCCCEEEEeeecCCCeeEEEeC
Confidence 9999999999998765555 789999999999999998875
No 39
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=99.81 E-value=4.5e-20 Score=156.30 Aligned_cols=87 Identities=37% Similarity=0.549 Sum_probs=77.2
Q ss_pred cCCCCCCcCccccccEEEEcCCCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEE
Q 009313 419 ASTKPYIPDYKLAFEHFCVHAASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQ 498 (537)
Q Consensus 419 ~gl~~y~pdf~~did~~~~H~~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd~Vll 498 (537)
+|+++ +|||+|++||.+.++++.+.+.+|++++++ ..++++||||+|+|+|++|+++.++|++++||+|++
T Consensus 4 ~g~~~------~did~~i~hq~~~~~~~~~~~~lgi~~~~~---~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~ 74 (90)
T PF08541_consen 4 AGLSP------DDIDHFIPHQASKKILDSIAKRLGIPPERF---PDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLL 74 (90)
T ss_dssp TT--G------GGESEEEE-SSSHHHHHHHHHHHTS-GGGB---E-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEE
T ss_pred ccCCH------HHCCEEEeCCCCHHHHHHHHHHcCCcHHHH---HHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEE
Confidence 78887 999999999999999999999999999999 689999999999999999999999999999999999
Q ss_pred EEEchHHHhhheeEEE
Q 009313 499 IAFGSGFKCNSVVWQA 514 (537)
Q Consensus 499 iafGsG~~~~s~v~r~ 514 (537)
+++|+|++|++++|||
T Consensus 75 ~~~G~G~~~~~~~~~~ 90 (90)
T PF08541_consen 75 VGFGAGFSWGAAVLRW 90 (90)
T ss_dssp EEEETTTEEEEEEEE-
T ss_pred EEEEhhheeEEEEEEC
Confidence 9999999999999997
No 40
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=99.80 E-value=1.3e-19 Score=168.10 Aligned_cols=128 Identities=20% Similarity=0.364 Sum_probs=96.5
Q ss_pred ceeccccccccccccchhhhhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCcc
Q 009313 350 VYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYK 429 (537)
Q Consensus 350 v~~~~d~~G~~g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~ 429 (537)
+...-++.| +.+.|++++|.++.+.++. ..+++++. .+++.
T Consensus 17 m~~~i~~~G-f~~~Ls~~vP~~i~~~i~~----------------------~~~~~L~~----------~g~~~------ 57 (151)
T PF02797_consen 17 MGWDIGDTG-FHFILSKEVPDLISDNIPP----------------------FVEDLLAR----------HGLSD------ 57 (151)
T ss_dssp EEEEEETTE-EEEEE-TTHHHHHHHHHHH----------------------HHHHHHHG----------GTCCS------
T ss_pred eEEEEeCCe-EEEEEhhHhHHHHHHHHHH----------------------HHHHHHhh----------hcccc------
Confidence 444433434 6788999999886543211 12455554 56653
Q ss_pred ccccEEEEcCCCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHH----cCCCCC---CCEEEEEEEc
Q 009313 430 LAFEHFCVHAASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEA----KERVKR---GDRVWQIAFG 502 (537)
Q Consensus 430 ~did~~~~H~~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~----~g~l~~---Gd~VlliafG 502 (537)
.++.+|++|+||++|++.+++.|+|+++++.+||.+|++|||+||+++++.|+++.+ +|.... +++++++|||
T Consensus 58 ~~~~~wavHPGG~~ILd~v~~~L~L~~~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g~~~~~~g~~~gv~~afG 137 (151)
T PF02797_consen 58 WDILFWAVHPGGRKILDAVEEALGLSPEQLRASREVLREYGNMSSATVLFVLERMRRKSAEEGAPPPGEGGEWGVMLAFG 137 (151)
T ss_dssp GGGSEEEEE-SSHHHHHHHHHHHTS-GGGGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTTTSBTTTTBSEEEEEEEE
T ss_pred cccceeeecCChHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhcccCCCCCCCeEEEEEEC
Confidence 456799999999999999999999999999999999999999999999999999887 344332 4899999999
Q ss_pred hHHHhhheeEEEec
Q 009313 503 SGFKCNSVVWQAMR 516 (537)
Q Consensus 503 sG~~~~s~v~r~~~ 516 (537)
+||+..++++|.+.
T Consensus 138 PG~t~E~~lLr~~~ 151 (151)
T PF02797_consen 138 PGLTIEGMLLRSVP 151 (151)
T ss_dssp TTTEEEEEEEEE-B
T ss_pred CcceEeeEEEeeCC
Confidence 99999999999863
No 41
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.70 E-value=3e-16 Score=164.82 Aligned_cols=257 Identities=12% Similarity=0.054 Sum_probs=171.5
Q ss_pred hHHHHHHHHHHHHHHhCC-CCCCCccEEEEecc------CCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHH
Q 009313 197 EASMVMFGALDELFEKTK-VRPKDVGILVVNCS------IFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDL 269 (537)
Q Consensus 197 ea~~l~~~Aa~~aL~~ag-i~~~dId~LI~~ss------~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~l 269 (537)
...+|+..|++++|++++ +++++||++|+.++ ++...|.++..++.++|++...++++++ .+|++++.||..
T Consensus 64 r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~i~-~~casg~~Al~~ 142 (348)
T PRK06147 64 RLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRLEPGSAVIA-RGRVSGAVALAQ 142 (348)
T ss_pred HHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCCCCCccccc-ccchHHHHHHHH
Confidence 456778999999999999 79999999887643 2233456688999999996557889999 699999999999
Q ss_pred HHHHHHcCCCCeEEEEEecccccc----cCC------CCCcCCCccccccccceEEEEEeccCccccccceeeeeEEEEE
Q 009313 270 ARDMLQANPNNYAVVVSTEMVGYN----WYA------GRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTH 339 (537)
Q Consensus 270 A~~lL~~g~~~~aLVVs~E~~S~~----~~~------~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~t~ 339 (537)
|.++|+.|..+.+||+++|.++.. ++. .+++. ...+|||||+++||++.+....+ .-++.. ..
T Consensus 143 A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~~~~~---~G~v~GEGA~a~vLe~~~~A~~r-ga~i~a---~g 215 (348)
T PRK06147 143 ARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLTSQNS---NGFIPGEAAAAVLLGRPAGGEAP-GLPLLG---LG 215 (348)
T ss_pred HHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCCCCCC---CceeeeceEEEEEEccHhhhhcC-CCceEE---EE
Confidence 999999999999999999986641 111 12222 35789999999999976542211 111111 11
Q ss_pred eccCCCccccceeccccccccccccchhhhhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhccccccc
Q 009313 340 TGADDRSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLA 419 (537)
Q Consensus 340 ~~sd~~~~~~v~~~~d~~G~~g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~ 419 (537)
.+.+...+. .+.+. |. -.+. +....++.++. +
T Consensus 216 ~~~~~~~~~---------------~~~~~----------------p~---~g~g----l~~ai~~AL~~----------a 247 (348)
T PRK06147 216 LGREPAPVG---------------ESEDL----------------PL---RGDG----LTQAIRAALAE----------A 247 (348)
T ss_pred EeecCCCcc---------------cCCCC----------------CC---ChHH----HHHHHHHHHHH----------c
Confidence 111111100 00000 00 0000 11223555554 7
Q ss_pred CCCCCCcCccccccEEEEcCCCHHHHHHH-----HHHcCCChhhhhhhhhccccccccccchHHHHHHHHHH--cCCCCC
Q 009313 420 STKPYIPDYKLAFEHFCVHAASKTVLDEL-----QKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEA--KERVKR 492 (537)
Q Consensus 420 gl~~y~pdf~~did~~~~H~~g~~vl~~l-----~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~--~g~l~~ 492 (537)
++++ +|||+++.|..|....+.. .+.++-..+.... +.+-..+||+++|+-.+++..... +...-+
T Consensus 248 gl~~------~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~-~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~ 320 (348)
T PRK06147 248 GCGL------EDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDL-WHPAECIGEIGAAIGPALLGVALAASRKGYGP 320 (348)
T ss_pred CCCH------HHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCce-ecchHhhcchHHHHHHHHHHHHHHHHHcCcCC
Confidence 8887 9999999998877665433 3344432222110 345667999999999999886443 234457
Q ss_pred CCEEEEEEEchHHHhhheeEEEec
Q 009313 493 GDRVWQIAFGSGFKCNSVVWQAMR 516 (537)
Q Consensus 493 Gd~VlliafGsG~~~~s~v~r~~~ 516 (537)
|+++++++-.-.-..++++++..+
T Consensus 321 g~~~L~~s~~d~g~r~a~~l~~~~ 344 (348)
T PRK06147 321 GPNVLCHLSDDDGARAALVLEYRR 344 (348)
T ss_pred CCcEEEEecCCCCceEEEEEeccc
Confidence 999999999877778999998543
No 42
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=99.70 E-value=8.8e-17 Score=150.94 Aligned_cols=167 Identities=20% Similarity=0.332 Sum_probs=123.8
Q ss_pred CCCceEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeEEccCCccccccccchhhhhhhhH
Q 009313 119 RPRSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEA 198 (537)
Q Consensus 119 ~~~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~p~~~~~ma~~~~ea 198 (537)
||++|.|.+++.|.|. ..++.+++.++-+. ++. |+..-.|.++..+.++.+ ...+|+
T Consensus 1 ~p~~VGI~~i~~y~p~--~~v~~~~La~~~g~----d~~------K~~~glgq~~~av~~~~E-----D~vTmA------ 57 (174)
T PF01154_consen 1 RPQNVGIDAIEFYIPR--YYVDQEELAEARGV----DPG------KYTIGLGQEKMAVPPPDE-----DIVTMA------ 57 (174)
T ss_dssp --SSEEEEEEEEE-ES--EEEEHHHHHHHTTS-----TC------HHHTTT--SEEEE--TTS------HHHHH------
T ss_pred CCccccEeEEEEecCc--eEecHHHHHHHhCC----CHH------HhhhhcCeeEEEeCCCcc-----cHHHHH------
Confidence 7999999999999999 99999999877543 332 444444444556666554 345664
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCCCccHHHHHHHHcCC--CCCeeEEEecCccchHHHHHHHHHHHHHH
Q 009313 199 SMVMFGALDELFEKTKVRPKDVGILVVNCSI-FNPTPSLSAMIINHYKM--RGNIISYNLGGMGCSAGVIGVDLARDMLQ 275 (537)
Q Consensus 199 ~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~-~~~~Ps~a~~I~~~lGl--~~~~~~~~l~g~gCs~gl~AL~lA~~lL~ 275 (537)
..|++++|++.+++|++|+.|+++|.+ ....-+.+.+|++.||+ .+++..+++- ++|.||..||..|.+++.
T Consensus 58 ----~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k-~ACygGTaAL~~a~~~v~ 132 (174)
T PF01154_consen 58 ----ANAAKPLLDRYNIDPDDIGRLIVGTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMK-QACYGGTAALQNAVNWVA 132 (174)
T ss_dssp ----HHHHHTTHHHHT-HHHHEEEEEEE-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEE-SGGGHHHHHHHHHHHHHC
T ss_pred ----HHHHHHHHHHcCCCHHHccEEEEeccccccccccHHHHHHHHhCcCCCCceeeeehh-hhhHHHHHHHHHHHHHHh
Confidence 999999999999999999999999844 44567899999999999 4578999999 799999999999999999
Q ss_pred cCC--CCeEEEEEecccccccCCCCCcCCCccccccccceEEEEEecc
Q 009313 276 ANP--NNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNR 321 (537)
Q Consensus 276 ~g~--~~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~~ 321 (537)
+++ .+++|||++|+.- |...+ +...-|-||+|+|++.+
T Consensus 133 s~~~~g~~aLVVasDiA~---y~~g~-----~e~TqGAGAVAmLi~~n 172 (174)
T PF01154_consen 133 SSPWDGRKALVVASDIAR---YDLGS-----AEPTQGAGAVAMLIGPN 172 (174)
T ss_dssp STTSTTEEEEEEEEEEE-----STTT-----TGGG-EEEEEEEEEECS
T ss_pred cCCCCCCeEEEEeccccc---cCCCC-----ccccccceeEEEEecCC
Confidence 975 5899999999952 22121 13567999999999965
No 43
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.63 E-value=2.1e-14 Score=146.85 Aligned_cols=115 Identities=10% Similarity=0.150 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCC
Q 009313 199 SMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANP 278 (537)
Q Consensus 199 ~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~ 278 (537)
.+|+.+|+++||+++|++++|||.+|+++.+.. +..+..+++.||+ +.|+++ .+|++++.||.+|..++++|.
T Consensus 51 ~eLa~eAa~~ALekAGL~~~DID~IIvGdl~~Q--~~~As~vA~~LGI----P~fdV~-~ACSTf~~AL~lAa~lI~SG~ 123 (327)
T TIGR02845 51 RKLMEDAVNLALKKANLKKDDVDFFLAGDLLNQ--IITANFVARDLGI----PFLGLY-GACSTSMETLALGAMLVDGGF 123 (327)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEeCCCCc--ccHHHHHHHHhCC----CEEEEe-ccCHHHHHHHHHHHHHHhCCC
Confidence 356799999999999999999999998875443 4568899999997 459999 699999999999999999999
Q ss_pred CCeEEEEEeccccc---c--cC-CC--CCcCCCccccccccceEEEEEeccCc
Q 009313 279 NNYAVVVSTEMVGY---N--WY-AG--RDRSMMIPNCFFRMGCSAILMSNRRR 323 (537)
Q Consensus 279 ~~~aLVVs~E~~S~---~--~~-~~--~dr~~ll~~~lfgDGAAAvLLs~~~~ 323 (537)
.++||||++|..|. . +. ++ ++|. +..+|+|||+|+||++.+.
T Consensus 124 ad~VLVV~Ssh~S~AErqfr~p~eyg~q~~~---ta~~tgdGAGA~vl~~~~~ 173 (327)
T TIGR02845 124 ADRVLAATSSHYATAERQFRYPTEYGVQKPP---TAQWTVTGAGAVLLASTGG 173 (327)
T ss_pred CCEEEEEEecccchhhhhcccccccccCCCC---eeeEEEcccEEEEEeecCC
Confidence 99999999998872 1 11 22 4555 6789999999999998754
No 44
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.62 E-value=4e-14 Score=150.82 Aligned_cols=286 Identities=14% Similarity=0.154 Sum_probs=169.0
Q ss_pred CceEEEEEeEEeCCCCcccCHHHHHHHHhccC-CCChhhHHHHHHHHHHcCCceeE--EccCCc--cccccccchhhhhh
Q 009313 121 RSVYLVDFACYRPSDDLKVTREQFIEVAGKWS-KSDEASLDFQRRIMKSSGIGDET--YIPKVV--MSAEENCMTMKHGR 195 (537)
Q Consensus 121 ~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~-~~~~~~~~f~~~i~~~sGI~~r~--~~~~~~--~~~p~~~~~ma~~~ 195 (537)
++|+|+|+|+..|.. .+.+++++.+..-. .+.+-. +| +..+...+. ..+... ..+| .......
T Consensus 1 ~~i~I~G~g~~~p~g---~~~~~~~~~l~~g~~~~~~~~-~~-----~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~ 68 (406)
T cd00834 1 RRVVITGLGAVTPLG---NGVEEFWEALLAGRSGIRPIT-RF-----DASGFPSRIAGEVPDFDPEDYLD---RKELRRM 68 (406)
T ss_pred CcEEEECcceeCCCc---CCHHHHHHHHHcCCCeeEECC-cc-----cccCCCccEEEEcCCCChhhcCC---HHHhccC
Confidence 479999999999983 67888888764310 011000 00 001111111 111111 0011 1111222
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCccE----EEEeccC-C--------------------------CCCccHHHHHHHHc
Q 009313 196 LEASMVMFGALDELFEKTKVRPKDVGI----LVVNCSI-F--------------------------NPTPSLSAMIINHY 244 (537)
Q Consensus 196 ~ea~~l~~~Aa~~aL~~agi~~~dId~----LI~~ss~-~--------------------------~~~Ps~a~~I~~~l 244 (537)
....+++..|++++|+++|++++++|. ++++++. . ...+..+.+|+..|
T Consensus 69 ~~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 148 (406)
T cd00834 69 DRFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRL 148 (406)
T ss_pred CHHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHh
Confidence 467788999999999999999876553 4444322 1 12245788999999
Q ss_pred CCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEecccccc----------------------cCCC-CCcC
Q 009313 245 KMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYN----------------------WYAG-RDRS 301 (537)
Q Consensus 245 Gl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~----------------------~~~~-~dr~ 301 (537)
|++ .++++++ .+|++++.||..|.++|++|..++|||+++|..+.. ..+. .++
T Consensus 149 gl~--g~~~~v~-~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~~- 224 (406)
T cd00834 149 GLR--GPNYTVS-TACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDR- 224 (406)
T ss_pred CCC--Ccccccc-hHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCCC-
Confidence 996 5889999 699999999999999999999999999999987610 1011 122
Q ss_pred CCccccccccceEEEEEeccCccccccceeeee-EEEEEeccCCCccccceeccccccccccccchhhhhhhcccccccc
Q 009313 302 MMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQL-IVRTHTGADDRSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALKTNI 380 (537)
Q Consensus 302 ~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~-~v~t~~~sd~~~~~~v~~~~d~~G~~g~~ls~dl~~~~g~~lk~ni 380 (537)
...++||||+|+||++.+....+ +-++.. +.......|+.. +
T Consensus 225 ---~g~~~geGA~a~vL~~~~~A~~~-g~~~~a~i~g~~~~~d~~~-----------------~---------------- 267 (406)
T cd00834 225 ---DGFVLGEGAGVLVLESLEHAKAR-GAKIYAEILGYGASSDAYH-----------------I---------------- 267 (406)
T ss_pred ---CCEeeeccEEEEEEecHHHHHHC-CCeEEEEEEEEEecccCCC-----------------C----------------
Confidence 25789999999999976542211 111111 111111111110 0
Q ss_pred cccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccEEEEcCCCHHHHHH-----HHHHcCCC
Q 009313 381 TTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVHAASKTVLDE-----LQKNLELS 455 (537)
Q Consensus 381 ~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H~~g~~vl~~-----l~~~Lgl~ 455 (537)
+...|. .+ ......+++++. +++++ +|||++.+|..|....|. +.+.++-.
T Consensus 268 ~~~~~~----~~----~~~~~i~~al~~----------agi~~------~dId~v~~h~tgt~~~d~~E~~al~~~~~~~ 323 (406)
T cd00834 268 TAPDPD----GE----GAARAMRAALAD----------AGLSP------EDIDYINAHGTSTPLNDAAESKAIKRVFGEH 323 (406)
T ss_pred CCCCCC----cH----HHHHHHHHHHHH----------cCCCH------HHCCEEecccccCccccHHHHHHHHHHhccc
Confidence 000000 00 111234566665 78887 999999999888765553 44455543
Q ss_pred hhhhhhhhhccccccccccchHHHHHHHH
Q 009313 456 EKNMEASRMTLHRFGNTSSSSIWYELAYL 484 (537)
Q Consensus 456 ~e~~~~S~~~l~r~GNtsSaSi~~~La~~ 484 (537)
.+++.- ...=..+||+.++|-...|..+
T Consensus 324 ~~~~~v-~s~k~~~Gh~~~AsG~~~l~~~ 351 (406)
T cd00834 324 AKKVPV-SSTKSMTGHLLGAAGAVEAIAT 351 (406)
T ss_pred CCCCce-eCcchhhccchhhhhHHHHHHH
Confidence 223321 1234457999999988887654
No 45
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]
Probab=99.61 E-value=4.8e-14 Score=144.07 Aligned_cols=320 Identities=18% Similarity=0.274 Sum_probs=210.1
Q ss_pred CCCceEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeEEccCCccccccccchhhhhhhhH
Q 009313 119 RPRSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEA 198 (537)
Q Consensus 119 ~~~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~p~~~~~ma~~~~ea 198 (537)
.|.+|.|.++-+|.|. .-|++++++.+-+. +.- .-..|+++....-.+ -||..
T Consensus 8 ~p~dvGI~aieiyfP~--~yV~Q~elEk~d~v----s~g--------KytIGLGq~~Mgfcs-------------drEDi 60 (462)
T KOG1393|consen 8 WPKDVGIIAIEIYFPS--QYVDQEELEKFDGV----SAG--------KYTIGLGQTQMGFCS-------------DREDI 60 (462)
T ss_pred CccccceeEEEEEcCc--cccChhhHhhcCCc----ccc--------ceEeccCcceecccC-------------chhhh
Confidence 5779999999999999 88999998765432 111 123677776543211 12233
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCCCccHHHHHHHHcC--CCCCeeEEEecCccchHHHHHHHHHHHHHH
Q 009313 199 SMVMFGALDELFEKTKVRPKDVGILVVNCSI-FNPTPSLSAMIINHYK--MRGNIISYNLGGMGCSAGVIGVDLARDMLQ 275 (537)
Q Consensus 199 ~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~-~~~~Ps~a~~I~~~lG--l~~~~~~~~l~g~gCs~gl~AL~lA~~lL~ 275 (537)
-.+...++.+++++-+|+++.|+.|-|+|.+ -.-.-|.-..+.+.|+ =..++..+|.. ++|-||..||--|-++++
T Consensus 61 ~Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiDKSKSVKt~LMqLF~~sgNtdIEGiDtt-nACYGGtaALfnavnWiE 139 (462)
T KOG1393|consen 61 ISLSLTVVSRLMERYNIDPDSIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDIEGIDTT-NACYGGTAALFNAVNWIE 139 (462)
T ss_pred hhhhHHHHHHHHHHhCCChhhcceEEecceeccccchHHHHHHHHHhhhcCCCcccccccc-ccccccHHHHHHHhhhhh
Confidence 4446999999999999999999999999854 3345677777888777 44579999999 799999999999999999
Q ss_pred cCC--CCeEEEEEecccccccCCCCCcCCCccccccccceEEEEEeccCccccccceeeeeEEEEEeccCCCccccceec
Q 009313 276 ANP--NNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVYQE 353 (537)
Q Consensus 276 ~g~--~~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~t~~~sd~~~~~~v~~~ 353 (537)
+.. +++||||++|+.- +-.|+-|. .=|-||.|+|++....-. |+ .++..+|.. ..|+ +|-|
T Consensus 140 SssWDGr~aivV~gDIAv--Y~~G~aRp------TGGAgAVAmLIgPnApi~----fe-rglr~thM~---hayD-FyKP 202 (462)
T KOG1393|consen 140 SSSWDGRYAIVVCGDIAV--YAKGNARP------TGGAGAVAMLIGPNAPII----FE-RGLRATHMQ---HAYD-FYKP 202 (462)
T ss_pred hcccCCceeEEEEeeEEE--ecCCCCCC------CCCcceEEEEEcCCCceE----ec-ccchhhhhh---hhhh-ccCC
Confidence 874 6999999999842 12344443 459999999999765421 11 012223321 1222 1111
Q ss_pred cccccccccccchhhhhhhcccccccccccCCCccccchhhH-HHHHH----HHHHHHhhhhhhcccccccCCCCCCcCc
Q 009313 354 EDEQGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLF-FFATL----VWRHLFSGSADKSRSSSLASTKPYIPDY 428 (537)
Q Consensus 354 ~d~~G~~g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~~-~~~~~----~~r~vl~~a~~~~~~~~~~gl~~y~pdf 428 (537)
.+..+.|.|.|.- |-|.. ..+.. ..+++-++... . -+.+
T Consensus 203 ---------dl~SEyPvVDGkl---------------Si~cYl~Ald~cY~~~~kK~~~~~~~----~--~~~~------ 246 (462)
T KOG1393|consen 203 ---------DLLSEYPVVDGKL---------------SIQCYLSALDRCYTVYRKKIAAQWQK----S--GSDN------ 246 (462)
T ss_pred ---------CCCCcCceecCee---------------hHHHHHHHHHHHHHHHHHHHHHHhcc----c--cCcc------
Confidence 1334455554421 22211 01111 11222221000 0 1222
Q ss_pred cccccEEEEcCCCHHHHHH-H-----------------------------------------HHHcCCChhhhhhhhhcc
Q 009313 429 KLAFEHFCVHAASKTVLDE-L-----------------------------------------QKNLELSEKNMEASRMTL 466 (537)
Q Consensus 429 ~~did~~~~H~~g~~vl~~-l-----------------------------------------~~~Lgl~~e~~~~S~~~l 466 (537)
.++||++++|.+-.++.+. + +-...+-.+++.+|.-.-
T Consensus 247 l~~fdy~ifHsP~cKlvqKs~arl~ynDf~~~~~~~~~~~~~~~~~~l~~s~~dr~~ek~~~~~s~~~~~~Kt~~sl~~~ 326 (462)
T KOG1393|consen 247 LNSFDYIIFHSPYCKLVQKSLARLLYNDFLLNPSQLPESAGLESTLKLDESYTDRDLEKAFIKISKPIFKKKTKPSLLAP 326 (462)
T ss_pred cccCCeEEEeCchhhhHHHHHHHhhhhhhhhccccccccccccccccccccccchHHHHHHHHHhHHHHHhhccceeEee
Confidence 3689999999987766654 1 112223344666666666
Q ss_pred ccccccccchHHHHHHHHHHcC--CCCCCCEEEEEEEchHHHhhheeEEEeccCC
Q 009313 467 HRFGNTSSSSIWYELAYLEAKE--RVKRGDRVWQIAFGSGFKCNSVVWQAMRRVK 519 (537)
Q Consensus 467 ~r~GNtsSaSi~~~La~~~~~g--~l~~Gd~VlliafGsG~~~~s~v~r~~~~~~ 519 (537)
.+.||+.++|+...|..+++.. .--.|.||.+.++|+|......-+|...+..
T Consensus 327 ~~~GNmYTaSly~~l~sll~~~~~d~l~Gkrig~FSYGSGlAAs~fs~~v~~da~ 381 (462)
T KOG1393|consen 327 RRNGNMYTASLYASLASLLSAVPADELAGKRIGMFSYGSGLAASMFSLRVTQDAT 381 (462)
T ss_pred ccCCccccHHHHHHHHHHHhccchhhhhccEEEEEeecCcchhheEEEEecCCCC
Confidence 6899999999999999988865 3346999999999999988888888777544
No 46
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.56 E-value=2e-13 Score=145.35 Aligned_cols=94 Identities=14% Similarity=0.171 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHc
Q 009313 198 ASMVMFGALDELFEKTKVRPKDVGILVVNCS-IFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQA 276 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~ss-~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~ 276 (537)
..+|+.+|++++|+++|++++|||.+|++++ ++...|..+.+++..+|+++++++++++ ++|++++.+|.+|..++++
T Consensus 22 ~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v~-~~c~s~~~al~~A~~~I~s 100 (386)
T cd00751 22 ADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTVN-RVCGSGLQAVALAAQSIAA 100 (386)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhhc-cccHHHHHHHHHHHHHHHC
Confidence 3566799999999999999999999998754 4555677788899999997558999999 7999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 009313 277 NPNNYAVVVSTEMVGY 292 (537)
Q Consensus 277 g~~~~aLVVs~E~~S~ 292 (537)
|..++|||+++|.+|.
T Consensus 101 G~~~~vLv~g~e~~s~ 116 (386)
T cd00751 101 GEADVVVAGGVESMSR 116 (386)
T ss_pred CCCCeEEEeeeecccc
Confidence 9999999999998653
No 47
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.55 E-value=5.5e-13 Score=143.16 Aligned_cols=123 Identities=12% Similarity=0.148 Sum_probs=94.9
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCcc----EEEEeccC-CC-------------------CCccHHHHHHHHcCCCCCee
Q 009313 196 LEASMVMFGALDELFEKTKVRPKDVG----ILVVNCSI-FN-------------------PTPSLSAMIINHYKMRGNII 251 (537)
Q Consensus 196 ~ea~~l~~~Aa~~aL~~agi~~~dId----~LI~~ss~-~~-------------------~~Ps~a~~I~~~lGl~~~~~ 251 (537)
.....++..|++++|+++|+++++|| .+|++++. ++ ..+..+..|+..+|++ .+
T Consensus 85 ~~~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~--g~ 162 (424)
T smart00825 85 DPQQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLR--GP 162 (424)
T ss_pred CHHHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCC--CC
Confidence 34567899999999999999999998 67777532 11 1345678899999997 48
Q ss_pred EEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEecccccc----------c------CCCCCcCCCccccccccceEE
Q 009313 252 SYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYN----------W------YAGRDRSMMIPNCFFRMGCSA 315 (537)
Q Consensus 252 ~~~l~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~----------~------~~~~dr~~ll~~~lfgDGAAA 315 (537)
+++++ .+|++++.||..|.++|++|..+++||+++|..... + ..+.|... ...++||||+|
T Consensus 163 ~~~v~-~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~--~g~~~geGAaa 239 (424)
T smart00825 163 SVTVD-TACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDADA--DGYVRGEGVGV 239 (424)
T ss_pred ccccc-cHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCCC--CcccccceEEE
Confidence 89999 699999999999999999999999999999974320 1 11111111 35689999999
Q ss_pred EEEeccCc
Q 009313 316 ILMSNRRR 323 (537)
Q Consensus 316 vLLs~~~~ 323 (537)
+||++...
T Consensus 240 lVLe~~e~ 247 (424)
T smart00825 240 VVLKRLSD 247 (424)
T ss_pred EEEccHHH
Confidence 99997543
No 48
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.50 E-value=1.7e-12 Score=138.72 Aligned_cols=94 Identities=13% Similarity=0.194 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHc
Q 009313 198 ASMVMFGALDELFEKTKVRPKDVGILVVNCSI-FNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQA 276 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~-~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~ 276 (537)
..+|+.+|++++|+++|++|+|||.+|++|+. ....+..+..++..+|++..+++++++ .+|++|+.++..|.+++++
T Consensus 26 ~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~V~-~~Casg~~ai~~A~~~I~s 104 (393)
T PRK05656 26 AVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPAMTLN-KVCGSGLKALHLAAQAIRC 104 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcceEEec-ccchhHHHHHHHHHHHHHc
Confidence 34567999999999999999999999998753 333566778899999997558999999 7999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 009313 277 NPNNYAVVVSTEMVGY 292 (537)
Q Consensus 277 g~~~~aLVVs~E~~S~ 292 (537)
|..+++||+++|.+|.
T Consensus 105 G~~d~vLv~G~E~ms~ 120 (393)
T PRK05656 105 GDAEVIIAGGQENMSL 120 (393)
T ss_pred CCCCEEEEEEEhhhcc
Confidence 9999999999997653
No 49
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.50 E-value=1.6e-12 Score=133.32 Aligned_cols=115 Identities=13% Similarity=0.182 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCC
Q 009313 200 MVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPN 279 (537)
Q Consensus 200 ~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~ 279 (537)
+|+.+|+++||+++|++++|||.+|+++...+ +..+..+++.+|+ +.+++. .+|+++..||.+|..++++|..
T Consensus 58 eLa~eAa~~ALekAGI~~~DID~lI~Gdll~Q--~~sAs~vA~~LGI----Pa~dV~-gACST~~~AL~lAa~lI~SG~a 130 (337)
T PRK08304 58 KMMEDAIQQALQKANLKKSDIDYLLAGDLLNQ--IISANFAARELGI----PFLGLY-GACSTMMESLALGSMLIDGGFA 130 (337)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEECCCCC--cchHHHHHHHhCC----cEEEEe-ccCHHHHHHHHHHHHHHhcCCC
Confidence 45699999999999999999999998876443 4568899999986 789999 5999999999999999999999
Q ss_pred CeEEEEEecccccc---cCC----CCCcCCCccccccccceEEEEEeccCc
Q 009313 280 NYAVVVSTEMVGYN---WYA----GRDRSMMIPNCFFRMGCSAILMSNRRR 323 (537)
Q Consensus 280 ~~aLVVs~E~~S~~---~~~----~~dr~~ll~~~lfgDGAAAvLLs~~~~ 323 (537)
++||||++|..+.. |.. +..|.. +...+++||+|+||++...
T Consensus 131 d~VLVV~Ssh~s~aerqfr~P~eyg~qrp~--taqwtvtGAGA~i~~~~~~ 179 (337)
T PRK08304 131 DRVLAATSSHFATAERQFRFPTEYGGQRPP--TAQWTVTGAGAVLLSREGS 179 (337)
T ss_pred CEEEEEEcchhhhhhhhccCchhccccCCC--cceEEeeccEEEEEecCCC
Confidence 99999999998752 322 233432 5789999999999998754
No 50
>PRK09051 beta-ketothiolase; Provisional
Probab=99.49 E-value=2.7e-12 Score=137.05 Aligned_cols=93 Identities=17% Similarity=0.209 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCCC-ccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHc
Q 009313 199 SMVMFGALDELFEKTKVRPKDVGILVVNCSI-FNPT-PSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQA 276 (537)
Q Consensus 199 ~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~-~~~~-Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~ 276 (537)
.+|+.+|++++|+++|++|+|||.+|++|+. +... +..+..+...+|+++++++++|+ ++|++|+.|+.+|.+++++
T Consensus 28 ~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~V~-~aCaSg~~Al~~A~~~I~s 106 (394)
T PRK09051 28 TDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPAFNVN-RLCGSGLQAIVSAAQAILL 106 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCCceEEec-ccchHHHHHHHHHHHHHHc
Confidence 4557999999999999999999999998653 4433 34556666778997679999999 7999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 009313 277 NPNNYAVVVSTEMVGY 292 (537)
Q Consensus 277 g~~~~aLVVs~E~~S~ 292 (537)
|..+++||+++|.+|.
T Consensus 107 G~~d~vLvvG~E~mS~ 122 (394)
T PRK09051 107 GDADVAIGGGAESMSR 122 (394)
T ss_pred CCCCEEEEEeehhccc
Confidence 9999999999998874
No 51
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=99.49 E-value=1.6e-12 Score=138.55 Aligned_cols=94 Identities=15% Similarity=0.229 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHc
Q 009313 198 ASMVMFGALDELFEKTKVRPKDVGILVVNCS-IFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQA 276 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~ss-~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~ 276 (537)
..+|+.+|+++||+++|++++|||.+|+++. ++...|..+..++..+|++.++++++++ ++|++++.+|.+|.+++++
T Consensus 21 ~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~-~~Casg~~al~~A~~~I~s 99 (386)
T TIGR01930 21 AEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVN-RQCASGLQAVILAAQLIRA 99 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeeec-chhhHHHHHHHHHHHHHHC
Confidence 4566799999999999999999999998764 4444577788899999998568999999 7999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 009313 277 NPNNYAVVVSTEMVGY 292 (537)
Q Consensus 277 g~~~~aLVVs~E~~S~ 292 (537)
|..+++||+++|.+|.
T Consensus 100 G~~~~vLv~g~e~~s~ 115 (386)
T TIGR01930 100 GEADVVVAGGVESMSR 115 (386)
T ss_pred CCCCEEEEEEehhhcc
Confidence 9999999999998654
No 52
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.47 E-value=4.6e-12 Score=135.09 Aligned_cols=92 Identities=14% Similarity=0.116 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCC--CccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHH
Q 009313 198 ASMVMFGALDELFEKTKVRPKDVGILVVNCS-IFNP--TPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDML 274 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~ss-~~~~--~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL 274 (537)
..+++.+|++++|+++|++++|||.+|++++ ++.. .|..+.+++..+|++ ..++++++ ++|+++..||..|.++|
T Consensus 22 ~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~-~aCasg~~ai~~A~~~I 99 (389)
T PRK06064 22 LRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA-PIPATRVE-AACASGGAALRQAYLAV 99 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-CCCeeEEe-CCcHHHHHHHHHHHHHH
Confidence 3456799999999999999999999998754 3332 467788999999997 68999999 79999999999999999
Q ss_pred HcCCCCeEEEEEecccc
Q 009313 275 QANPNNYAVVVSTEMVG 291 (537)
Q Consensus 275 ~~g~~~~aLVVs~E~~S 291 (537)
++|..+++||+++|.+|
T Consensus 100 ~sG~~~~vLv~G~e~~s 116 (389)
T PRK06064 100 ASGEADVVLAAGVEKMT 116 (389)
T ss_pred HCCCCCEEEEEEEEecc
Confidence 99999999999999755
No 53
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.46 E-value=8.5e-12 Score=133.19 Aligned_cols=186 Identities=11% Similarity=0.077 Sum_probs=116.8
Q ss_pred CceEEEEEeEEeCCCCcccCHHHHHHHHhccC-CCChhhHHHHHHHHHHcCCceeE--EccCCc--cccccccchhhhhh
Q 009313 121 RSVYLVDFACYRPSDDLKVTREQFIEVAGKWS-KSDEASLDFQRRIMKSSGIGDET--YIPKVV--MSAEENCMTMKHGR 195 (537)
Q Consensus 121 ~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~-~~~~~~~~f~~~i~~~sGI~~r~--~~~~~~--~~~p~~~~~ma~~~ 195 (537)
++|.|+|+|+..|.. .+.+++++.+..-. .+.+-. + +...+...+. ..+... ..++ ..-...-
T Consensus 1 ~~v~ItG~g~~~p~g---~~~~~~~~~l~~g~s~~~~~~-----~-~~~~~~~~~~~g~i~~f~~~~~~~---~~~~~~~ 68 (407)
T TIGR03150 1 RRVVVTGLGAVTPLG---NGVEEFWENLLAGKSGIGPIT-----R-FDASDLPVKIAGEVKDFDPEDYID---KKEARRM 68 (407)
T ss_pred CcEEEEcceEECCCc---CCHHHHHHHHHcCCCeeEECC-----c-ccccCCCCcEEEEeCCcChhhcCC---HHHHhhc
Confidence 479999999999983 68899988765310 011000 0 0000111000 011000 0011 0111112
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCccE----EEEeccCC------------------C--------CCc-cHHHHHHHHc
Q 009313 196 LEASMVMFGALDELFEKTKVRPKDVGI----LVVNCSIF------------------N--------PTP-SLSAMIINHY 244 (537)
Q Consensus 196 ~ea~~l~~~Aa~~aL~~agi~~~dId~----LI~~ss~~------------------~--------~~P-s~a~~I~~~l 244 (537)
+...+++..|++++|+++|++++++|. ++++++.. . ..+ ..+.+|...+
T Consensus 69 ~~~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 148 (407)
T TIGR03150 69 DRFIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRY 148 (407)
T ss_pred CHHHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHh
Confidence 345788999999999999999988875 55554211 0 011 2456799999
Q ss_pred CCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEecccccc-----------c--C--------CCCCcCCC
Q 009313 245 KMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYN-----------W--Y--------AGRDRSMM 303 (537)
Q Consensus 245 Gl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~-----------~--~--------~~~dr~~l 303 (537)
|++ .+++.+. .+|++++.||..|.++|++|..+.+||++.|..... + + .+-|+..
T Consensus 149 gl~--g~~~~v~-~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~- 224 (407)
T TIGR03150 149 GAK--GPNHAVV-TACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDR- 224 (407)
T ss_pred CCC--Ccccccc-cHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCCC-
Confidence 996 5889999 699999999999999999999999999999963220 0 0 0011110
Q ss_pred ccccccccceEEEEEeccCc
Q 009313 304 IPNCFFRMGCSAILMSNRRR 323 (537)
Q Consensus 304 l~~~lfgDGAAAvLLs~~~~ 323 (537)
..+++||||+|+||++.+.
T Consensus 225 -~g~~~gEGAaalvL~~~~~ 243 (407)
T TIGR03150 225 -DGFVMGEGAGVLVLEELEH 243 (407)
T ss_pred -CcEEEeceEEEEEEeeHHH
Confidence 2467899999999997653
No 54
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.45 E-value=8e-12 Score=133.58 Aligned_cols=223 Identities=12% Similarity=0.043 Sum_probs=140.0
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCC-cc----EEEEeccCC-----------------------CCC--ccHHHHHHHHcC
Q 009313 196 LEASMVMFGALDELFEKTKVRPKD-VG----ILVVNCSIF-----------------------NPT--PSLSAMIINHYK 245 (537)
Q Consensus 196 ~ea~~l~~~Aa~~aL~~agi~~~d-Id----~LI~~ss~~-----------------------~~~--Ps~a~~I~~~lG 245 (537)
+...+++..|+++||+++|+++++ ++ .++++++.. ... ...+.+|+..||
T Consensus 70 ~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 149 (407)
T cd00828 70 DRTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLL 149 (407)
T ss_pred CHHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhC
Confidence 456788999999999999998765 33 233343210 111 456788999999
Q ss_pred CCCCeeEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEecccccc--------------------cCCCCCcCCCcc
Q 009313 246 MRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYN--------------------WYAGRDRSMMIP 305 (537)
Q Consensus 246 l~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~--------------------~~~~~dr~~ll~ 305 (537)
++ ..+++.++ .+|++++.||..|.++|++|..+.+||+++|..+.. ...+.|+.. .
T Consensus 150 l~-~Gp~~tv~-~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~~--~ 225 (407)
T cd00828 150 SS-HGPIKTPV-GACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDETR--D 225 (407)
T ss_pred cC-CCCCcCcc-cHHHHHHHHHHHHHHHHHcCCCCEEEEccccccChHHHHHHHHcCCCCCCCCCCCcccCCCcCCC--C
Confidence 93 25889999 699999999999999999999999999999986510 001111111 3
Q ss_pred ccccccceEEEEEeccCccccccceeeee-EEEEEeccCCCccccceeccccccccccccchhhhhhhcccccccccccC
Q 009313 306 NCFFRMGCSAILMSNRRRDYHRAKYRLQL-IVRTHTGADDRSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTLG 384 (537)
Q Consensus 306 ~~lfgDGAAAvLLs~~~~~~~~~~~~L~~-~v~t~~~sd~~~~~~v~~~~d~~G~~g~~ls~dl~~~~g~~lk~ni~~lg 384 (537)
.+++||||+++||++.+....+. -++.. +.......|+... + .
T Consensus 226 G~~~gEGAaalvLe~~~~A~~rg-~~i~a~i~g~~~~~d~~~~-----------------~------------------~ 269 (407)
T cd00828 226 GFVEAEGAGVLVLERAELALARG-APIYGRVAGTASTTDGAGR-----------------S------------------V 269 (407)
T ss_pred cEEeecceEEEEEeeHHHHHHCC-CeEEEEEEEEEeccCCCCC-----------------C------------------C
Confidence 57899999999999865432211 11111 1111111121100 0 0
Q ss_pred CCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccEEEEcCCCHHHHHH-----HHHHcCCC--hh
Q 009313 385 PLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVHAASKTVLDE-----LQKNLELS--EK 457 (537)
Q Consensus 385 p~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H~~g~~vl~~-----l~~~Lgl~--~e 457 (537)
+. +.+ ......+++++. +|+++ +|||++..|..+....|. +.+.++-. +-
T Consensus 270 ~~----~~~---~~~~a~~~Al~~----------Agi~~------~dId~i~~hgtgt~~~D~~E~~ai~~~~~~~~~~~ 326 (407)
T cd00828 270 PA----GGK---GIARAIRTALAK----------AGLSL------DDLDVISAHGTSTPANDVAESRAIAEVAGALGAPL 326 (407)
T ss_pred CC----ChH---HHHHHHHHHHHH----------cCCCH------HHcCEEecccccCccccHHHHHHHHHHHhccCCCc
Confidence 00 000 011223556665 88887 999999999777655443 33344332 22
Q ss_pred hhhhhhhccccccccccchHHHHHHHH
Q 009313 458 NMEASRMTLHRFGNTSSSSIWYELAYL 484 (537)
Q Consensus 458 ~~~~S~~~l~r~GNtsSaSi~~~La~~ 484 (537)
.+ ..+-..+||+.+++-.++|...
T Consensus 327 ~v---~s~K~~~Gh~~~Asg~~~l~~~ 350 (407)
T cd00828 327 PV---TAQKALFGHSKGAAGALQLIGA 350 (407)
T ss_pred ee---ecccchhccchhhhhHHHHHHH
Confidence 23 3455679999999998888654
No 55
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.44 E-value=1e-11 Score=131.43 Aligned_cols=94 Identities=14% Similarity=0.111 Sum_probs=83.1
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHH
Q 009313 197 EASMVMFGALDELFEKTKVRPKDVGILVVNCS-IFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQ 275 (537)
Q Consensus 197 ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss-~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~ 275 (537)
...+|+.+|++++|+++|++++|||.++++++ +....|..+.+++.++|++ +++.++++ ++|++++.++..|.++++
T Consensus 15 ~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~-~~c~sg~~al~~Aa~~I~ 92 (375)
T cd00829 15 SPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLL-GKPATRVE-AAGASGSAAVRAAAAAIA 92 (375)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCC-CcceeeEe-CccHHHHHHHHHHHHHHH
Confidence 34566799999999999999999999998765 3333577789999999997 78999999 799999999999999999
Q ss_pred cCCCCeEEEEEeccccc
Q 009313 276 ANPNNYAVVVSTEMVGY 292 (537)
Q Consensus 276 ~g~~~~aLVVs~E~~S~ 292 (537)
+|..++|||+++|.++.
T Consensus 93 sG~~~~vlv~g~e~~s~ 109 (375)
T cd00829 93 SGLADVVLVVGAEKMSD 109 (375)
T ss_pred hCCCCEEEEEEEeeccc
Confidence 99999999999998764
No 56
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.44 E-value=2.4e-11 Score=131.11 Aligned_cols=308 Identities=16% Similarity=0.152 Sum_probs=178.0
Q ss_pred CceEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeEEccCCcc------cccc-ccchhhh
Q 009313 121 RSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVM------SAEE-NCMTMKH 193 (537)
Q Consensus 121 ~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~------~~p~-~~~~ma~ 193 (537)
.+|.|.|+|+-.|-. .+.+++.+.+.. |. +||+.-...+.... ..+. +.... .
T Consensus 11 ~~VvITG~G~vs~~G---~~~~~~~~~L~~-G~---------------s~i~~~~~~~~~~~~~~~~g~~~~~~~~~~-~ 70 (425)
T PRK06501 11 PIVAVTGMGVVTSLG---QGKADNWAALTA-GE---------------SGIHTITRFPTEGLRTRIAGTVDFLPESPF-G 70 (425)
T ss_pred cCEEEEeeeEECCCC---CCHHHHHHHHHc-CC---------------CceEcCCcccccCCCCceEEEEeecccccc-c
Confidence 369999999999873 678998887753 11 22221110000000 0000 00001 1
Q ss_pred hhhhHHHHHHHHHHHHHHhCCCCCCCcc------------------EEEEecc----------------CCC-------C
Q 009313 194 GRLEASMVMFGALDELFEKTKVRPKDVG------------------ILVVNCS----------------IFN-------P 232 (537)
Q Consensus 194 ~~~ea~~l~~~Aa~~aL~~agi~~~dId------------------~LI~~ss----------------~~~-------~ 232 (537)
.......++..|++++|+++|+++.+.+ .++..+. +.. .
T Consensus 71 ~~~~~~~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (425)
T PRK06501 71 ASALSEALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQ 150 (425)
T ss_pred ccCHHHHHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhc
Confidence 1223567889999999999998643321 1122211 011 3
Q ss_pred CccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEecc---------------cccc--c-
Q 009313 233 TPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEM---------------VGYN--W- 294 (537)
Q Consensus 233 ~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~---------------~S~~--~- 294 (537)
.|+.+.+|+.+||++ .++++++ .+|++++.||..|.++|++|..+.+||+++|. ++.. +
T Consensus 151 ~~~~a~~i~~~~gl~--G~~~~i~-~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~ 227 (425)
T PRK06501 151 FGSIADRLADRFGTR--GLPISLS-TACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPP 227 (425)
T ss_pred ccHHHHHHHHHhCCC--CCceeec-CccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCCCC
Confidence 467899999999996 5889999 69999999999999999999999999999993 2210 0
Q ss_pred ---CCC--CCcCCCccccccccceEEEEEeccCccccccceeeeeEEE-EEeccCCCccccceeccccccccccccchhh
Q 009313 295 ---YAG--RDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVR-THTGADDRSFRSVYQEEDEQGFRGLKVSKNI 368 (537)
Q Consensus 295 ---~~~--~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~-t~~~sd~~~~~~v~~~~d~~G~~g~~ls~dl 368 (537)
.++ .+|+ ..++|||++|+||++.+....+ +.++...+. +....|+. .. ..+ +
T Consensus 228 ~~~~rpfd~~r~----G~v~GEGaaalVLe~~~~A~~r-g~~i~a~i~g~~~~~d~~-~~--~~~-----------~--- 285 (425)
T PRK06501 228 EKASKPFSKDRD----GFVMAEGAGALVLESLESAVAR-GAKILGIVAGCGEKADSF-HR--TRS-----------S--- 285 (425)
T ss_pred CcccCCCCCCCC----CeeeeccEEEEEECcHHHHHHC-CCeEEEEEEEEEEccCCC-CC--CCC-----------C---
Confidence 011 2344 4789999999999975542211 112222221 11111110 00 000 0
Q ss_pred hhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccEEEEcCCCHHHHHHH
Q 009313 369 MEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVHAASKTVLDEL 448 (537)
Q Consensus 369 ~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H~~g~~vl~~l 448 (537)
|. .+ -.....+++++. +++++ +|||++..|..+....|..
T Consensus 286 ----------------~~----~~----~~~~ai~~AL~~----------agi~p------~dId~i~~Hgtgt~~~d~~ 325 (425)
T PRK06501 286 ----------------PD----GS----PAIGAIRAALAD----------AGLTP------EQIDYINAHGTSTPENDKM 325 (425)
T ss_pred ----------------CC----HH----HHHHHHHHHHHH----------cCCCH------HHcCEEEecCccCcchHHH
Confidence 00 00 011223556664 78887 9999999999887776655
Q ss_pred H-----HHcCCChhhhhhhhhccccccccccchHHHHHHH---HHHcCCCCC------------------------CCEE
Q 009313 449 Q-----KNLELSEKNMEASRMTLHRFGNTSSSSIWYELAY---LEAKERVKR------------------------GDRV 496 (537)
Q Consensus 449 ~-----~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~---~~~~g~l~~------------------------Gd~V 496 (537)
+ +.++-...++.- ..+=..+||+.+++-.+++.- .+++|.+.+ -+.+
T Consensus 326 E~~al~~~~~~~~~~~pv-~s~k~~~Gh~~~AsG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (425)
T PRK06501 326 EYLGLSAVFGERLASIPV-SSNKSMIGHTLTAAGAVEAVFSLLTIQTGRLPPTINYDNPDPAIPLDVVPNVARDARVTAV 404 (425)
T ss_pred HHHHHHHHhcccCCCcEE-ECCCcccCCCchhhhHHHHHHHHHHHhcCcCCCcCCCCCCCCCCCcccCCCcccCCCCCEE
Confidence 4 344422122210 122335799998887777743 334443211 2345
Q ss_pred EEEEEchHHHhhheeEEE
Q 009313 497 WQIAFGSGFKCNSVVWQA 514 (537)
Q Consensus 497 lliafGsG~~~~s~v~r~ 514 (537)
+.-+||.|-.-.++|++.
T Consensus 405 l~ns~gfgG~n~~~vl~~ 422 (425)
T PRK06501 405 LSNSFGFGGQNASLVLTA 422 (425)
T ss_pred EEeCccCCCeeEEEEEec
Confidence 667788776767777664
No 57
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.44 E-value=7.7e-12 Score=133.80 Aligned_cols=94 Identities=14% Similarity=0.173 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHHhC-CCCCCCccEEEEecc-CCCCCccHHHHH-HHHcCCCCCeeEEEecCccchHHHHHHHHHHHHH
Q 009313 198 ASMVMFGALDELFEKT-KVRPKDVGILVVNCS-IFNPTPSLSAMI-INHYKMRGNIISYNLGGMGCSAGVIGVDLARDML 274 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~a-gi~~~dId~LI~~ss-~~~~~Ps~a~~I-~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL 274 (537)
..+|+.+|++++|+++ |++++|||.+|++++ ++...|....++ ...+|++..+++++|+ ++|++|+.|+..|.+++
T Consensus 31 ~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~-~aCaSg~~Al~~A~~~I 109 (399)
T PRK09052 31 PDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVGGVTVN-RFCASGLQAVAMAADRI 109 (399)
T ss_pred HHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCCCCCceeeec-chhhHHHHHHHHHHHHH
Confidence 4566799999999997 999999999999864 455555555564 4555997458999999 79999999999999999
Q ss_pred HcCCCCeEEEEEeccccc
Q 009313 275 QANPNNYAVVVSTEMVGY 292 (537)
Q Consensus 275 ~~g~~~~aLVVs~E~~S~ 292 (537)
++|..+++||++.|.+|.
T Consensus 110 ~sG~~d~vLv~G~E~mS~ 127 (399)
T PRK09052 110 RVGEADVMIAAGVESMSM 127 (399)
T ss_pred HCCCCCEEEEEEEecccc
Confidence 999999999999998763
No 58
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.44 E-value=1.4e-11 Score=131.23 Aligned_cols=91 Identities=12% Similarity=0.022 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCC--CccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHc
Q 009313 199 SMVMFGALDELFEKTKVRPKDVGILVVNCSIFNP--TPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQA 276 (537)
Q Consensus 199 ~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~--~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~ 276 (537)
.+++.+|+++||+++|++++|||.+|++++++.. .+..+..|++.+|++ +.++++++ .+|+++..++..|..+|++
T Consensus 25 ~eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~-~~~~~~v~-~~casg~~al~~A~~~I~s 102 (386)
T PRK08313 25 AGLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGAT-GKPLIRVH-TAGSVGGSTAVVAASLVQS 102 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCC-CCceEEEe-ccCHHHHHHHHHHHHHHHC
Confidence 4567999999999999999999999987654332 122236899999997 68899999 6999999999999999999
Q ss_pred CCCCeEEEEEecccc
Q 009313 277 NPNNYAVVVSTEMVG 291 (537)
Q Consensus 277 g~~~~aLVVs~E~~S 291 (537)
|..++||||++|..+
T Consensus 103 G~~~~vLVvg~e~~s 117 (386)
T PRK08313 103 GVYRRVLAVAWEKQS 117 (386)
T ss_pred CCCCEEEEEEEEEcc
Confidence 999999999999764
No 59
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.42 E-value=3.5e-11 Score=128.80 Aligned_cols=123 Identities=15% Similarity=0.168 Sum_probs=93.2
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCccE----EEEeccC-C-------------------CCCccHHHHHHHHcCCCCCee
Q 009313 196 LEASMVMFGALDELFEKTKVRPKDVGI----LVVNCSI-F-------------------NPTPSLSAMIINHYKMRGNII 251 (537)
Q Consensus 196 ~ea~~l~~~Aa~~aL~~agi~~~dId~----LI~~ss~-~-------------------~~~Ps~a~~I~~~lGl~~~~~ 251 (537)
....+++..|++++|+++|+++++++. ++++++. + ...+..+..|+..+|++ .+
T Consensus 85 ~~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~--g~ 162 (421)
T cd00833 85 DPQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLR--GP 162 (421)
T ss_pred CHHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCC--CC
Confidence 356788999999999999999887763 5555431 1 11245678899999996 48
Q ss_pred EEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEecccccc----------------cCCCCCcCCCccccccccceEE
Q 009313 252 SYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYN----------------WYAGRDRSMMIPNCFFRMGCSA 315 (537)
Q Consensus 252 ~~~l~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~----------------~~~~~dr~~ll~~~lfgDGAAA 315 (537)
++.+. .+|++++.||..|.++|++|..+.+||+++|..+.. ...+-|+. -...++||||+|
T Consensus 163 ~~~v~-~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~--~~g~~~geGAaa 239 (421)
T cd00833 163 SLTVD-TACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDAD--ADGYVRGEGVGV 239 (421)
T ss_pred ceeec-cHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCC--CCCeeeeceEEE
Confidence 99999 699999999999999999999999999999985310 01111111 135789999999
Q ss_pred EEEeccCc
Q 009313 316 ILMSNRRR 323 (537)
Q Consensus 316 vLLs~~~~ 323 (537)
+||++.+.
T Consensus 240 lvL~~~~~ 247 (421)
T cd00833 240 VVLKRLSD 247 (421)
T ss_pred EEEeeHHH
Confidence 99997654
No 60
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.41 E-value=3.8e-11 Score=128.67 Aligned_cols=317 Identities=12% Similarity=0.086 Sum_probs=182.1
Q ss_pred CceEEEEEeEEeCCCCcccCHHHHHHHHhccCC--CChhhHHHHHHHHHHcCCceeE--EccCCc--cccccccchhhhh
Q 009313 121 RSVYLVDFACYRPSDDLKVTREQFIEVAGKWSK--SDEASLDFQRRIMKSSGIGDET--YIPKVV--MSAEENCMTMKHG 194 (537)
Q Consensus 121 ~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~--~~~~~~~f~~~i~~~sGI~~r~--~~~~~~--~~~p~~~~~ma~~ 194 (537)
++|.|+|+||..|.. .+.++|++.+.. |. +.+-. + +...+...+. .+++.. ..++ ..+ ...
T Consensus 2 ~~v~ItG~g~~~p~g---~~~~~~w~~l~~-g~~~~~~~~-----~-~~~~~~~~~~~g~i~~f~~~~~~~--~~~-~~~ 68 (411)
T PRK07314 2 RRVVVTGLGAVSPLG---NDVESTWKNLLA-GKSGIGPIT-----H-FDTSDLAVKIAGEVKDFNPDDYMS--RKE-ARR 68 (411)
T ss_pred CcEEEEcceEECCCc---CCHHHHHHHHHh-CCCcEEECC-----c-ccccCCCccEEEEeCCcChhhcCC--HHH-hhc
Confidence 479999999999983 688999887653 11 00000 0 0001111110 111100 0011 011 112
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCCcc----EEEEeccCC------------------C--------CCcc-HHHHHHHH
Q 009313 195 RLEASMVMFGALDELFEKTKVRPKDVG----ILVVNCSIF------------------N--------PTPS-LSAMIINH 243 (537)
Q Consensus 195 ~~ea~~l~~~Aa~~aL~~agi~~~dId----~LI~~ss~~------------------~--------~~Ps-~a~~I~~~ 243 (537)
-....+++..|++++|+++|++++++| .++++++.. . ..++ .+.+|...
T Consensus 69 ~~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 148 (411)
T PRK07314 69 MDRFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIR 148 (411)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHH
Confidence 235678899999999999999998887 456554311 0 1122 46789999
Q ss_pred cCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEeccccccc---------------------CCCCCcCC
Q 009313 244 YKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYNW---------------------YAGRDRSM 302 (537)
Q Consensus 244 lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~~---------------------~~~~dr~~ 302 (537)
+|++ .+++.++ .+|++++.||..|.++|++|..+.|||+++|.....+ ..+-|+..
T Consensus 149 ~gl~--Gp~~tv~-~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~ 225 (411)
T PRK07314 149 YGAK--GPNHSIV-TACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDR 225 (411)
T ss_pred hCCC--Cccccch-hhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCC
Confidence 9997 4889999 6999999999999999999999999999999743210 00111111
Q ss_pred CccccccccceEEEEEeccCccccccceee-eeEEEEEeccCCCccccceeccccccccccccchhhhhhhccccccccc
Q 009313 303 MIPNCFFRMGCSAILMSNRRRDYHRAKYRL-QLIVRTHTGADDRSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALKTNIT 381 (537)
Q Consensus 303 ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L-~~~v~t~~~sd~~~~~~v~~~~d~~G~~g~~ls~dl~~~~g~~lk~ni~ 381 (537)
..+++||||+|+||++.+....+ +-++ ..+.......|+.. +..
T Consensus 226 --dG~~~geGAaavvL~~~~~A~~~-g~~~~a~I~g~~~~~d~~~---~~~----------------------------- 270 (411)
T PRK07314 226 --DGFVMGEGAGILVLEELEHAKAR-GAKIYAEVVGYGMTGDAYH---MTA----------------------------- 270 (411)
T ss_pred --CCEeEEceEEEEEEeeHHHHHHC-CCeEEEEEEEEEEcCCCCC---CCC-----------------------------
Confidence 24789999999999976432211 1111 11111111111110 000
Q ss_pred ccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccEEEEcCCCHHHHHH-----HHHHcCCCh
Q 009313 382 TLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVHAASKTVLDE-----LQKNLELSE 456 (537)
Q Consensus 382 ~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H~~g~~vl~~-----l~~~Lgl~~ 456 (537)
|. +..+ ......+++++. +|+++ +|||++..|..|...-|. +.+.++...
T Consensus 271 ---~~--~~~~----~~~~a~~~Al~~----------agi~~------~dId~v~~hgtgt~~~d~~E~~al~~~~~~~~ 325 (411)
T PRK07314 271 ---PA--PDGE----GAARAMKLALKD----------AGINP------EDIDYINAHGTSTPAGDKAETQAIKRVFGEHA 325 (411)
T ss_pred ---CC--CCcH----HHHHHHHHHHHH----------cCCCH------HHCCEEEccccCCccccHHHHHHHHHHhcccC
Confidence 00 0000 011234566665 89987 999999999888755544 445555433
Q ss_pred hhhhhhhhccccccccccchHHHHHHH---HHHcCCCC------------------------CCCEEEEEEEchHHHhhh
Q 009313 457 KNMEASRMTLHRFGNTSSSSIWYELAY---LEAKERVK------------------------RGDRVWQIAFGSGFKCNS 509 (537)
Q Consensus 457 e~~~~S~~~l~r~GNtsSaSi~~~La~---~~~~g~l~------------------------~Gd~VlliafGsG~~~~s 509 (537)
.++.. -..=..+||+.+++-...+.. +++.|.+. +-++++.-+||.|-.-.+
T Consensus 326 ~~~~v-~s~k~~~Gh~~~AsG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfGG~n~~ 404 (411)
T PRK07314 326 YKVAV-SSTKSMTGHLLGAAGAVEAIFSVLAIRDQVIPPTINLDNPDEECDLDYVPNEARERKIDYALSNSFGFGGTNAS 404 (411)
T ss_pred CCCee-ECccchhchhHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCccccCCcccCCCCCEEEEecccCCCceEE
Confidence 33311 112234799988876666544 23333221 224677788888777777
Q ss_pred eeEEE
Q 009313 510 VVWQA 514 (537)
Q Consensus 510 ~v~r~ 514 (537)
+|++.
T Consensus 405 ~vl~~ 409 (411)
T PRK07314 405 LVFKR 409 (411)
T ss_pred EEEec
Confidence 77763
No 61
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.41 E-value=1.2e-11 Score=131.94 Aligned_cols=94 Identities=16% Similarity=0.220 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCcc-HHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHH
Q 009313 198 ASMVMFGALDELFEKTKVRPKDVGILVVNCS-IFNPTPS-LSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQ 275 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~ss-~~~~~Ps-~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~ 275 (537)
+.+|+..|++++|+++|++|+|||.+|+++. ++...|+ .+..++.++|++.++++++|+ ++|++|+.||.+|..+|+
T Consensus 27 ~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~p~~~V~-~aCaSg~~Al~~A~~~I~ 105 (392)
T PRK07108 27 GATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMTVN-RFCSSGLQTIALAAQRVI 105 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCCceeeec-chhhHHHHHHHHHHHHHH
Confidence 3556799999999999999999999999865 4554454 788999999998679999999 899999999999999999
Q ss_pred cCCCCeEEEEEeccccc
Q 009313 276 ANPNNYAVVVSTEMVGY 292 (537)
Q Consensus 276 ~g~~~~aLVVs~E~~S~ 292 (537)
+|..+.+|+++.|.+|.
T Consensus 106 sG~~d~vlagGvE~ms~ 122 (392)
T PRK07108 106 AGEGDVFVAGGVESISC 122 (392)
T ss_pred CCCCCEEEEEEEeccCC
Confidence 99999999999999874
No 62
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.40 E-value=2e-11 Score=130.96 Aligned_cols=94 Identities=14% Similarity=0.193 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHc
Q 009313 198 ASMVMFGALDELFEKTKVRPKDVGILVVNCS-IFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQA 276 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~ss-~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~ 276 (537)
..+|+.+|++++|+++|++++|||.+|++++ +....|.++.+++..+|+++++++++++ .+|++|+.|+..|.+++++
T Consensus 26 ~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~~~V~-~~CaSg~~Al~~A~~~I~s 104 (404)
T PRK06205 26 AEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPGMQLD-RRCGSGLQAVITAAMQVQT 104 (404)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCceeehh-hhhhHHHHHHHHHHHHHHc
Confidence 3456799999999999999999999999865 4555688888899999998678999999 7999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 009313 277 NPNNYAVVVSTEMVGY 292 (537)
Q Consensus 277 g~~~~aLVVs~E~~S~ 292 (537)
|..+.+||++.|.+|.
T Consensus 105 G~~d~vLv~G~E~ms~ 120 (404)
T PRK06205 105 GAADVVIAGGAESMSN 120 (404)
T ss_pred CCCCEEEEeeehhhcc
Confidence 9999999999998773
No 63
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=99.39 E-value=3.9e-11 Score=127.81 Aligned_cols=91 Identities=11% Similarity=0.195 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcC
Q 009313 199 SMVMFGALDELFEKTKVRPKDVGILVVNCSI-FNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQAN 277 (537)
Q Consensus 199 ~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~-~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g 277 (537)
.+++.+|++++|+++|++++|||.+|++++. ....+..+..++..+|++ +.++++++ ++|++++.||..|..+|++|
T Consensus 22 ~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~-~~~~~~v~-~~casg~~al~~A~~~I~sG 99 (385)
T PRK12578 22 QELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLT-GKVPLRVE-AMCATGLAASLTAYTAVASG 99 (385)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCC-CCCeeEEe-ccCHHHHHHHHHHHHHHHCC
Confidence 4567999999999999999999999988653 211233467899999998 46789999 79999999999999999999
Q ss_pred CCCeEEEEEecccc
Q 009313 278 PNNYAVVVSTEMVG 291 (537)
Q Consensus 278 ~~~~aLVVs~E~~S 291 (537)
..+++|||++|.+|
T Consensus 100 ~~~~vLvvg~e~~s 113 (385)
T PRK12578 100 LVDMAIAVGVDKMT 113 (385)
T ss_pred CCCEEEEEEEeecc
Confidence 99999999999754
No 64
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.39 E-value=3.1e-11 Score=129.08 Aligned_cols=95 Identities=13% Similarity=0.236 Sum_probs=82.1
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCCC-ccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHH
Q 009313 197 EASMVMFGALDELFEKTKVRPKDVGILVVNCSI-FNPT-PSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDML 274 (537)
Q Consensus 197 ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~-~~~~-Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL 274 (537)
.+.+|+..|++++|+++|++|++||.+|++|.. .... +..+...+...|++.++++++|+ ++|++|+.||.+|.+++
T Consensus 27 ~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~~pa~~Vn-~aCaSg~~Ai~~A~~~I 105 (402)
T PRK08242 27 KPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVPGVQIN-RFCASGLEAVNLAAAKV 105 (402)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCCCCeEEEc-chhhhHHHHHHHHHHHH
Confidence 345667999999999999999999999998754 3332 34566677888997679999999 89999999999999999
Q ss_pred HcCCCCeEEEEEeccccc
Q 009313 275 QANPNNYAVVVSTEMVGY 292 (537)
Q Consensus 275 ~~g~~~~aLVVs~E~~S~ 292 (537)
++|..+++|++++|.+|.
T Consensus 106 ~sG~~d~vLv~G~E~mS~ 123 (402)
T PRK08242 106 RSGWDDLVIAGGVESMSR 123 (402)
T ss_pred HcCCCCEEEEEEEEccCC
Confidence 999999999999999885
No 65
>PRK06059 lipid-transfer protein; Provisional
Probab=99.39 E-value=3.8e-11 Score=128.56 Aligned_cols=91 Identities=16% Similarity=0.093 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccC--CCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHc
Q 009313 199 SMVMFGALDELFEKTKVRPKDVGILVVNCSI--FNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQA 276 (537)
Q Consensus 199 ~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~--~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~ 276 (537)
.+++.+|++++|+++|++++|||.||++++. .+..+..+..|+.++|++ ++++++++ .+|++++.+|..|.++|++
T Consensus 24 ~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-~~~~~~v~-~~Casg~~al~~A~~~I~s 101 (399)
T PRK06059 24 VEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-GAPVSSSY-AACASGSQALQSARAQILA 101 (399)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-CCceeccc-chhHHHHHHHHHHHHHHHC
Confidence 5667999999999999999999999987542 333455678999999997 58899999 6999999999999999999
Q ss_pred CCCCeEEEEEecccc
Q 009313 277 NPNNYAVVVSTEMVG 291 (537)
Q Consensus 277 g~~~~aLVVs~E~~S 291 (537)
|..+++||+++|.+|
T Consensus 102 G~~~~vLvvg~e~~s 116 (399)
T PRK06059 102 GLCDVALVVGADTTP 116 (399)
T ss_pred CCCCEEEEEEEcccC
Confidence 999999999999765
No 66
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.37 E-value=5e-11 Score=128.38 Aligned_cols=319 Identities=14% Similarity=0.097 Sum_probs=180.7
Q ss_pred CceEEEEEeEEeCCCCcccCHHHHHHHHhccCC--CChhhHHHHHHHHHHcCCcee--EEccCCcc-----ccccc--cc
Q 009313 121 RSVYLVDFACYRPSDDLKVTREQFIEVAGKWSK--SDEASLDFQRRIMKSSGIGDE--TYIPKVVM-----SAEEN--CM 189 (537)
Q Consensus 121 ~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~--~~~~~~~f~~~i~~~sGI~~r--~~~~~~~~-----~~p~~--~~ 189 (537)
++|.|+|+|+..|.. .+.++|++.+.. |. +.+-. +| ...+...+ -..+.... ..+.. ..
T Consensus 4 ~~V~ItG~g~~~p~g---~~~~~~w~~l~~-G~s~i~~~~-~~-----~~~~~~~~~~g~i~~~~~~~~~~fd~~~~i~~ 73 (424)
T PRK06333 4 KRIVVTGMGAVSPLG---CGVETFWQRLLA-GQSGIRTLT-DF-----PVGDLATKIGGQVPDLAEDAEAGFDPDRYLDP 73 (424)
T ss_pred CCEEEEcceEECCCC---CCHHHHHHHHHc-CCCeEEeCC-cc-----cccCCCCceEEEeccccccccccCChhHcCCH
Confidence 689999999999983 578999887754 21 00000 00 00011111 01111000 00000 01
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHhCCCCCCCc-c----EEEEeccCC----------------------C----CCc-cHH
Q 009313 190 TMKHGRLEASMVMFGALDELFEKTKVRPKDV-G----ILVVNCSIF----------------------N----PTP-SLS 237 (537)
Q Consensus 190 ~ma~~~~ea~~l~~~Aa~~aL~~agi~~~dI-d----~LI~~ss~~----------------------~----~~P-s~a 237 (537)
.....-.....++..|++++|+++|++++++ + .++++++.. . ..+ ..+
T Consensus 74 ~~~~~~d~~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 153 (424)
T PRK06333 74 KDQRKMDRFILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAA 153 (424)
T ss_pred HHHhhcCHHHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHH
Confidence 1112223567889999999999999987665 2 345554311 0 011 236
Q ss_pred HHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEeccccccc----------C------------
Q 009313 238 AMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYNW----------Y------------ 295 (537)
Q Consensus 238 ~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~~----------~------------ 295 (537)
.+|...||++ .+++.++ .+|++++.||..|.++|++|..+.+||+++|.....+ +
T Consensus 154 ~~is~~~gl~--Gp~~~v~-~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~ 230 (424)
T PRK06333 154 GHVSIRYGFK--GPLGAPV-TACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQAS 230 (424)
T ss_pred HHHHHHhCCC--CCCcccc-chhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCC
Confidence 7899999996 6888999 6999999999999999999999999999999732100 0
Q ss_pred CCCCcCCCccccccccceEEEEEeccCccccccceeeeeEE-EEEeccCCCccccceeccccccccccccchhhhhhhcc
Q 009313 296 AGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIV-RTHTGADDRSFRSVYQEEDEQGFRGLKVSKNIMEIGGD 374 (537)
Q Consensus 296 ~~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v-~t~~~sd~~~~~~v~~~~d~~G~~g~~ls~dl~~~~g~ 374 (537)
++.|+.. ...+.||||+++||++......+ +.++...+ ......|+.. +..+
T Consensus 231 ~Pfd~~~--~G~~~gEGaa~lvLe~~~~A~~r-g~~i~a~i~G~~~~~d~~~---~~~~--------------------- 283 (424)
T PRK06333 231 RPFDRDR--DGFVMGEGAGILVIETLEHALAR-GAPPLAELVGYGTSADAYH---MTAG--------------------- 283 (424)
T ss_pred CCCCCCC--CCeEEecceEEEEEeeHHHHHHC-CCeEEEEEEEEEEcCCCCC---CCCC---------------------
Confidence 0111111 24678999999999975432111 11111111 1111122110 0000
Q ss_pred cccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccEEEEcCCCHHHH-----HHHH
Q 009313 375 ALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVHAASKTVL-----DELQ 449 (537)
Q Consensus 375 ~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H~~g~~vl-----~~l~ 449 (537)
.| -.+ ......++.++. +|+++ +|||++..|..+...- ..+.
T Consensus 284 ---------~~----~~~----~~~~a~~~Al~~----------Agi~p------~dId~i~~hgtgt~~~D~~E~~al~ 330 (424)
T PRK06333 284 ---------PE----DGE----GARRAMLIALRQ----------AGIPP------EEVQHLNAHATSTPVGDLGEVAAIK 330 (424)
T ss_pred ---------CC----CcH----HHHHHHHHHHHH----------cCCCH------HHCCEEeccCCCCccchHHHHHHHH
Confidence 00 000 011224556665 88987 9999999998776543 3455
Q ss_pred HHcCCChhhhhhhhhccccccccccchHHHHHHH---HHHcCCC-------------------------CCCCEEEEEEE
Q 009313 450 KNLELSEKNMEASRMTLHRFGNTSSSSIWYELAY---LEAKERV-------------------------KRGDRVWQIAF 501 (537)
Q Consensus 450 ~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~---~~~~g~l-------------------------~~Gd~Vlliaf 501 (537)
+.++ ....+.. -.+...+||+.+++-..++.. .++.|.+ .+-++++.-+|
T Consensus 331 ~~fg-~~~~~~v-~s~K~~~GH~~gAaG~~~~~~~~l~l~~g~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~ 408 (424)
T PRK06333 331 KVFG-HVSGLAV-SSTKSATGHLLGAAGGVEAIFTILALRDQIAPPTLNLENPDPAAEGLDVVANKARPMDMDYALSNGF 408 (424)
T ss_pred HHhC-CCCCcee-ECcccchhhhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCccccccccCCCcccCcCEEEEeee
Confidence 6666 2222321 244567899888775555443 2333221 12345677789
Q ss_pred chHHHhhheeEEE
Q 009313 502 GSGFKCNSVVWQA 514 (537)
Q Consensus 502 GsG~~~~s~v~r~ 514 (537)
|.|-...+++++.
T Consensus 409 gfGG~n~~~il~~ 421 (424)
T PRK06333 409 GFGGVNASILFRR 421 (424)
T ss_pred cCCCeeEEEEEec
Confidence 9887777777764
No 67
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.37 E-value=2.8e-11 Score=129.32 Aligned_cols=94 Identities=17% Similarity=0.182 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCC-CCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHc
Q 009313 198 ASMVMFGALDELFEKTKVRPKDVGILVVNCSIF-NPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQA 276 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~-~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~ 276 (537)
..+|+.+|++++|+++|++|+|||.+|++|... ...+..+..++..+|++.++++++|+ ++|++|+.|+..|.++|++
T Consensus 26 ~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~V~-~~CaSg~~Al~~A~~~I~s 104 (393)
T PRK08235 26 ATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTETVN-KVCASGLRAVTLADQIIRA 104 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcceeehh-hhhhHHHHHHHHHHHHHHC
Confidence 356679999999999999999999999987531 12344556789999997679999999 7999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 009313 277 NPNNYAVVVSTEMVGY 292 (537)
Q Consensus 277 g~~~~aLVVs~E~~S~ 292 (537)
|..+++||+++|.+|.
T Consensus 105 G~~d~vLvvG~E~ms~ 120 (393)
T PRK08235 105 GDASVIVAGGMESMSN 120 (393)
T ss_pred CCCCEEEEEeeecccc
Confidence 9999999999998875
No 68
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=99.37 E-value=1.1e-12 Score=108.99 Aligned_cols=80 Identities=19% Similarity=0.396 Sum_probs=61.3
Q ss_pred EEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEecccccccCCCCCcCCCccccccccceEEEEEeccCccccccceee
Q 009313 253 YNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRL 332 (537)
Q Consensus 253 ~~l~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L 332 (537)
|||+ ++|++++.||++|..+++++..++||||++|..+. +.++.++. ...+|||||+|+||++.+.. .++
T Consensus 1 fDi~-~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~-~~~~~~~~---~~~~~gDgAaA~vl~~~~~~----~~~- 70 (80)
T PF08545_consen 1 FDIN-QACAGFLYALDVAAALIASGRAKNALVVGGDRLSR-IVDRTDRQ---TAFIFGDGAAAVVLSRDEEG----GFG- 70 (80)
T ss_dssp EEEE--GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG-GSHTTHHH---HHTTB-EEEEEEEEEEESSS----SCE-
T ss_pred Cccc-ccchHHHHHHHHHHHHHhhccCCEEEEEeeccccc-cccccccC---cceeecchheEEEEEecCCC----CCe-
Confidence 7999 79999999999999999999889999999999988 55555554 35689999999999997432 344
Q ss_pred eeEEEEEeccCC
Q 009313 333 QLIVRTHTGADD 344 (537)
Q Consensus 333 ~~~v~t~~~sd~ 344 (537)
++.++..+||
T Consensus 71 --il~~~~~tdG 80 (80)
T PF08545_consen 71 --ILDSHLRTDG 80 (80)
T ss_dssp --EEEEEEEE-G
T ss_pred --EEEEEEEcCC
Confidence 4445555553
No 69
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=99.36 E-value=7e-11 Score=126.39 Aligned_cols=95 Identities=19% Similarity=0.215 Sum_probs=85.9
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCC--CccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHH
Q 009313 197 EASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNP--TPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDML 274 (537)
Q Consensus 197 ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~--~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL 274 (537)
.+++|+..+++.+++++|++|++||.+|++|..... .+.++.+++-.-|++.+++++.|+ +.|++|+.|+.+|.+.+
T Consensus 28 ~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~~vp~~tvn-r~C~Sgl~ai~~aa~~I 106 (417)
T PRK06025 28 HPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKASGVTLD-RFCGGGITSVNLAAAQI 106 (417)
T ss_pred CHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCCCCCeeeec-cccchHHHHHHHHHHHH
Confidence 456677999999999999999999999999874322 377899999999999899999999 89999999999999999
Q ss_pred HcCCCCeEEEEEeccccc
Q 009313 275 QANPNNYAVVVSTEMVGY 292 (537)
Q Consensus 275 ~~g~~~~aLVVs~E~~S~ 292 (537)
++|..+.+|+.++|.+|.
T Consensus 107 ~~G~~~~~laGG~EsmS~ 124 (417)
T PRK06025 107 MSGMEDLVIAGGTEMMSY 124 (417)
T ss_pred HcCCCCEEEEeeeeccCC
Confidence 999999999999999985
No 70
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=99.36 E-value=5.2e-11 Score=127.44 Aligned_cols=94 Identities=16% Similarity=0.205 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHc
Q 009313 198 ASMVMFGALDELFEKTKVRPKDVGILVVNCSI-FNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQA 276 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~-~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~ 276 (537)
.++|+.+|++++|+++|++|+|||.+|++++. .....+........+|++.++++++|+ ++|++|+.|+..|.+++++
T Consensus 31 ~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p~~~V~-~aCaSG~~Av~~A~~~I~s 109 (397)
T PRK06954 31 APQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGCTTVN-KMCGSGMRAAMFAHDMLVA 109 (397)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCccEeecc-ccchHHHHHHHHHHHHHHC
Confidence 35667999999999999999999999998653 333334444555667787679999999 7999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 009313 277 NPNNYAVVVSTEMVGY 292 (537)
Q Consensus 277 g~~~~aLVVs~E~~S~ 292 (537)
|..+++||++.|.+|.
T Consensus 110 G~~d~vLv~G~E~ms~ 125 (397)
T PRK06954 110 GSVDVIVAGGMESMTN 125 (397)
T ss_pred CCCCEEEEEeeeccCC
Confidence 9999999999999873
No 71
>PRK05790 putative acyltransferase; Provisional
Probab=99.35 E-value=6.3e-11 Score=126.56 Aligned_cols=93 Identities=14% Similarity=0.180 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHc
Q 009313 198 ASMVMFGALDELFEKTKVRPKDVGILVVNCSI-FNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQA 276 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~-~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~ 276 (537)
..+++.+|++++|+++|++++|||.+|+++.. ....+..+..++..+|++.++++++++ .+|++++.||..|.+++++
T Consensus 26 ~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~~~~v~-~~Casg~~al~~A~~~I~s 104 (393)
T PRK05790 26 AVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVPALTIN-KVCGSGLKAVALAAQAIRA 104 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCceeeec-ccchHHHHHHHHHHHHHHc
Confidence 34567999999999999999999999987642 222344455677788997568999999 7999999999999999999
Q ss_pred CCCCeEEEEEecccc
Q 009313 277 NPNNYAVVVSTEMVG 291 (537)
Q Consensus 277 g~~~~aLVVs~E~~S 291 (537)
|..+++||++.|.+|
T Consensus 105 G~~d~vLv~G~e~~s 119 (393)
T PRK05790 105 GDADIVVAGGQESMS 119 (393)
T ss_pred CCCCEEEEEeeeccc
Confidence 999999999998754
No 72
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=99.34 E-value=1e-10 Score=124.99 Aligned_cols=93 Identities=9% Similarity=0.121 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCC-CccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHc
Q 009313 199 SMVMFGALDELFEKTKVRPKDVGILVVNCSI-FNP-TPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQA 276 (537)
Q Consensus 199 ~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~-~~~-~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~ 276 (537)
.+|+.+|++++|+++|+.++|||.+|++++. +.. .+.++.+++..+|++..+++++|+ ++|++|+.|+..|...|++
T Consensus 28 ~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~p~~~V~-~aCaSG~~Al~~A~~~I~s 106 (391)
T PRK07661 28 DDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVPAITIN-RYCSSGLQSIAYGAERIML 106 (391)
T ss_pred HHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCcceeehh-hhhhHHHHHHHHHHHHHHc
Confidence 4667999999999999888999999998643 322 367777899999998559999999 7999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 009313 277 NPNNYAVVVSTEMVGY 292 (537)
Q Consensus 277 g~~~~aLVVs~E~~S~ 292 (537)
|..+.+||++.|.+|.
T Consensus 107 G~~d~vLv~G~E~ms~ 122 (391)
T PRK07661 107 GHSEAVIAGGAESMSL 122 (391)
T ss_pred CCCCEEEEEEEeeccc
Confidence 9999999999998763
No 73
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=99.34 E-value=9.8e-11 Score=125.20 Aligned_cols=90 Identities=12% Similarity=0.270 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCC---CccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHH
Q 009313 199 SMVMFGALDELFEKTKVRPKDVGILVVNCSI-FNP---TPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDML 274 (537)
Q Consensus 199 ~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~-~~~---~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL 274 (537)
.+|+.+|++++|+++|++|+|||.+|+++.. ... .++....+...++ .++++++++ ++|++|+.|+..|.+++
T Consensus 33 ~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~~--~~~p~~~V~-~~CaSg~~ai~~A~~~I 109 (394)
T PRK06445 33 EELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLP--YNIPAMAVD-RQCASSLTTVSIGAMEI 109 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCCC--CCCcchhhh-hhhHHHHHHHHHHHHHH
Confidence 4557999999999999999999999988653 222 2244444555555 368999999 79999999999999999
Q ss_pred HcCCCCeEEEEEecccc
Q 009313 275 QANPNNYAVVVSTEMVG 291 (537)
Q Consensus 275 ~~g~~~~aLVVs~E~~S 291 (537)
++|..+++||+++|.+|
T Consensus 110 ~sG~~d~vLv~G~e~ms 126 (394)
T PRK06445 110 ATGMADIVIAGGVEHMT 126 (394)
T ss_pred HcCCCCEEEEeeecccc
Confidence 99999999999999766
No 74
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=99.32 E-value=1.3e-10 Score=124.82 Aligned_cols=250 Identities=16% Similarity=0.180 Sum_probs=151.3
Q ss_pred hHHHHHHHHHHHHHHhCCCC---CCCccEEEEecc----------------CCCCCc---------cHHHHHHHHcCCCC
Q 009313 197 EASMVMFGALDELFEKTKVR---PKDVGILVVNCS----------------IFNPTP---------SLSAMIINHYKMRG 248 (537)
Q Consensus 197 ea~~l~~~Aa~~aL~~agi~---~~dId~LI~~ss----------------~~~~~P---------s~a~~I~~~lGl~~ 248 (537)
...+++..|++++|+++|++ +++|++++.++. +.+..| ..+.+|+..||++
T Consensus 79 ~~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~- 157 (410)
T PRK07103 79 LSAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIR- 157 (410)
T ss_pred HHHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCC-
Confidence 46678999999999999986 456777664432 111112 2567789999997
Q ss_pred CeeEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEecc-cccc----------------------cCCCCCcCCCcc
Q 009313 249 NIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEM-VGYN----------------------WYAGRDRSMMIP 305 (537)
Q Consensus 249 ~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~-~S~~----------------------~~~~~dr~~ll~ 305 (537)
.+++.++ .+|++++.||..|.++|++|..+.|||+++|. .+.. ...+-|+.. .
T Consensus 158 -G~~~tv~-~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~~--d 233 (410)
T PRK07103 158 -GEGFTVG-GASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDR--D 233 (410)
T ss_pred -CCccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCCC--C
Confidence 4788899 69999999999999999999999999999864 2210 000112111 2
Q ss_pred ccccccceEEEEEeccCcccccc--ceeeeeEEEEEeccCCCccccceeccccccccccccchhhhhhhccccccccccc
Q 009313 306 NCFFRMGCSAILMSNRRRDYHRA--KYRLQLIVRTHTGADDRSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTL 383 (537)
Q Consensus 306 ~~lfgDGAAAvLLs~~~~~~~~~--~~~L~~~v~t~~~sd~~~~~~v~~~~d~~G~~g~~ls~dl~~~~g~~lk~ni~~l 383 (537)
..++||||+|+||++......+. .| ..+.......|+.. ..
T Consensus 234 G~v~gEGaaalvLe~~~~A~~~g~~i~--a~I~g~~~~~d~~~---~~-------------------------------- 276 (410)
T PRK07103 234 GFIYGEACGAVVLESAESARRRGARPY--AKLLGWSMRLDANR---GP-------------------------------- 276 (410)
T ss_pred CeeEeeeEEEEEEccHHHHHHCCCceE--EEEEEEEEecCCCC---CC--------------------------------
Confidence 57899999999999765422111 12 11222222222210 00
Q ss_pred CCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccEEEEcCCCHHHHHHHHH-H-cCCChhhhhh
Q 009313 384 GPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVHAASKTVLDELQK-N-LELSEKNMEA 461 (537)
Q Consensus 384 gp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H~~g~~vl~~l~~-~-Lgl~~e~~~~ 461 (537)
.|. .+ -.....++.++. +|+++ +|||++..|..+...-|..+. . .+....++.-
T Consensus 277 ~p~----~~----~~~~a~~~Al~~----------Agi~~------~dId~v~~hgtgt~~~D~~E~~al~~~~~~~~~v 332 (410)
T PRK07103 277 DPS----LE----GEMRVIRAALRR----------AGLGP------EDIDYVNPHGTGSPLGDETELAALFASGLAHAWI 332 (410)
T ss_pred CCC----HH----HHHHHHHHHHHH----------cCCCH------HHCCEEEccCCCCCCCCHHHHHHHhcCCCCCCeE
Confidence 000 00 001123556665 88987 999999999988776544321 1 2211112210
Q ss_pred hhhccccccccccchHHHHHHHH---HHcCCCC-----------------------CCCEEEEEEEchHHHhhheeEE
Q 009313 462 SRMTLHRFGNTSSSSIWYELAYL---EAKERVK-----------------------RGDRVWQIAFGSGFKCNSVVWQ 513 (537)
Q Consensus 462 S~~~l~r~GNtsSaSi~~~La~~---~~~g~l~-----------------------~Gd~VlliafGsG~~~~s~v~r 513 (537)
-.+=..+||+.+++-.++|... +++|.+. +-.+++..+||.|-.-.++|++
T Consensus 333 -~s~k~~~Gh~~~AsG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~s~gfGG~n~~~vl~ 409 (410)
T PRK07103 333 -NATKSLTGHGLSAAGIVELIATLLQMRAGFLHPSRNLDEPIDERFRWVGSTAESARIRYALSLSFGFGGINTALVLE 409 (410)
T ss_pred -ECCCcccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCcCccCCCCcCCCCCEEEEecccCCCceEEEEEe
Confidence 1223457999999888887653 2333211 1245677778877776677765
No 75
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.30 E-value=4.9e-10 Score=120.56 Aligned_cols=311 Identities=14% Similarity=0.095 Sum_probs=180.2
Q ss_pred hcCCCceEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeEEccCCcc------cc----cc
Q 009313 117 MSRPRSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVM------SA----EE 186 (537)
Q Consensus 117 ~~~~~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~------~~----p~ 186 (537)
|++ ++|.|+|+|+-.|.. .+.+++++.+.. | ++||++....+.+.. .+ ++
T Consensus 1 m~~-~~VvItG~g~~~p~g---~~~~~~w~~L~~-g---------------~s~i~~~~~~~~~~~~~~~~g~i~~~~~~ 60 (414)
T PRK08722 1 MSK-RRVVVTGMGMLSPVG---NTVESSWKALLA-G---------------QSGIVNIEHFDTTNFSTRFAGLVKDFNCE 60 (414)
T ss_pred CCC-CCEEEEeeEEECCCC---CCHHHHHHHHHh-C---------------CCeeeecCccccccCCCceeEEcCCCChh
Confidence 444 689999999999983 678888887643 1 122221110000000 00 00
Q ss_pred c--cchhhhhhhhHHHHHHHHHHHHHHhCCCCCC-----CccEEEEeccC-C-----------------C--------CC
Q 009313 187 N--CMTMKHGRLEASMVMFGALDELFEKTKVRPK-----DVGILVVNCSI-F-----------------N--------PT 233 (537)
Q Consensus 187 ~--~~~ma~~~~ea~~l~~~Aa~~aL~~agi~~~-----dId~LI~~ss~-~-----------------~--------~~ 233 (537)
. ...-...-....+++..|+.++|+++|++++ ++++++ +++. . . ..
T Consensus 61 ~~~~~~~~~~~d~~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~v-Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (414)
T PRK08722 61 EYMSKKDARKMDLFIQYGIAAGIQALDDSGLEVTEENAHRIGVAI-GSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTI 139 (414)
T ss_pred HcCCHHHHhhcCHHHHHHHHHHHHHHHHcCCCccccCCCCEEEEE-eeCCCcchhHHHHHHHHHhcCcccCCchhccccc
Confidence 0 0011111234567889999999999998754 344444 4321 0 0 11
Q ss_pred c-cHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEeccccccc----------C-------
Q 009313 234 P-SLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYNW----------Y------- 295 (537)
Q Consensus 234 P-s~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~~----------~------- 295 (537)
| ..+.+|...+|++ -+++.++ .+|++++.||..|.++|++|..+.+||+++|.....+ .
T Consensus 140 ~n~~a~~is~~~gl~--Gp~~ti~-~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p 216 (414)
T PRK08722 140 VNMIAGNLSIMRGLR--GPNIAIS-TACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEP 216 (414)
T ss_pred ccHHHHHHHHHhCCC--CCccccc-cccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCC
Confidence 2 3688899999998 5899999 6999999999999999999999999999999843210 0
Q ss_pred ----CCCCcCCCccccccccceEEEEEeccCccccc--cceeeeeEEEEEeccCCCccccceeccccccccccccchhhh
Q 009313 296 ----AGRDRSMMIPNCFFRMGCSAILMSNRRRDYHR--AKYRLQLIVRTHTGADDRSFRSVYQEEDEQGFRGLKVSKNIM 369 (537)
Q Consensus 296 ----~~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~--~~~~L~~~v~t~~~sd~~~~~~v~~~~d~~G~~g~~ls~dl~ 369 (537)
++-|+.. ...+.|||++++||.+......+ ..|- .+......+|+.. +..+ +
T Consensus 217 ~~~~rpfd~~~--~G~~~gEGaaalvLe~~~~A~~~g~~i~a--~i~g~~~~~d~~~---~~~p-------------~-- 274 (414)
T PRK08722 217 QKASRPWDKDR--DGFVLGDGAGMMVLEEYEHAKARGAKIYA--ELVGFGMSGDAYH---MTSP-------------S-- 274 (414)
T ss_pred ccccCcCcCCC--CceEeeceEEEEEEccHHHHHHCCCeEEE--EEEEEEEcCCCCC---CCCC-------------C--
Confidence 0112111 25778999999999976543211 1121 1122222222110 0000 0
Q ss_pred hhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccEEEEcCCCHHHHHH--
Q 009313 370 EIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVHAASKTVLDE-- 447 (537)
Q Consensus 370 ~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H~~g~~vl~~-- 447 (537)
.. | + -.....++.++. +|+++ +|||++..|..+...-|.
T Consensus 275 -~~-----------~--------~---~~~~a~~~Al~~----------agi~~------~did~ie~hgtgt~~~D~~E 315 (414)
T PRK08722 275 -ED-----------G--------S---GGALAMEAAMRD----------AGVTG------EQIGYVNAHGTSTPAGDVAE 315 (414)
T ss_pred -cc-----------h--------H---HHHHHHHHHHHH----------cCCCH------HHcCEEEccCccCCCCCHHH
Confidence 00 0 0 001123556665 88887 999999999887665554
Q ss_pred ---HHHHcCCC-hhhhhhhhhccccccccccchHHHHHHH---HHHcCCCC-------------------------CCCE
Q 009313 448 ---LQKNLELS-EKNMEASRMTLHRFGNTSSSSIWYELAY---LEAKERVK-------------------------RGDR 495 (537)
Q Consensus 448 ---l~~~Lgl~-~e~~~~S~~~l~r~GNtsSaSi~~~La~---~~~~g~l~-------------------------~Gd~ 495 (537)
+.+.++-. .+++.- -.+=..+||+.+++-..++.. ++++|.+. +-.+
T Consensus 316 ~~al~~~fg~~~~~~~~v-~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~~v~~~~~~~~~~~~ 394 (414)
T PRK08722 316 IKGIKRALGEAGSKQVLV-SSTKSMTGHLLGAAGSVEAIITVMSLVDQIVPPTINLDDPEEGLDIDLVPHTARKVESMEY 394 (414)
T ss_pred HHHHHHHhcccCCCCcee-eCcccccccchHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCCccccCCCCCE
Confidence 44555522 122211 123346899999988777743 23333211 1245
Q ss_pred EEEEEEchHHHhhheeEE
Q 009313 496 VWQIAFGSGFKCNSVVWQ 513 (537)
Q Consensus 496 VlliafGsG~~~~s~v~r 513 (537)
++.-+||.|-.-.++|++
T Consensus 395 ~l~nsfGfGG~n~~lvl~ 412 (414)
T PRK08722 395 AICNSFGFGGTNGSLIFK 412 (414)
T ss_pred EEEecccCCCceEEEEEe
Confidence 667778877776677765
No 76
>PLN02287 3-ketoacyl-CoA thiolase
Probab=99.27 E-value=3e-10 Score=123.23 Aligned_cols=93 Identities=17% Similarity=0.188 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCcc-HHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHH
Q 009313 198 ASMVMFGALDELFEKTKVRPKDVGILVVNCS-IFNPTPS-LSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQ 275 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~ss-~~~~~Ps-~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~ 275 (537)
..+|+.+|++++|+++|++++|||.+|+++. +....+. .+.+++..+|+++.+++++++ .+|++|+.|+..|...|+
T Consensus 71 ~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa~~V~-~~CaSG~~Ai~~Aa~~I~ 149 (452)
T PLN02287 71 PDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAAIK 149 (452)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcceEEEe-ccCchHHHHHHHHHHHHH
Confidence 3556799999999999999999999998765 3443344 345677788998668999999 799999999999999999
Q ss_pred cCCCCeEEEEEecccc
Q 009313 276 ANPNNYAVVVSTEMVG 291 (537)
Q Consensus 276 ~g~~~~aLVVs~E~~S 291 (537)
+|..+.|||++.|.+|
T Consensus 150 sG~~dvvLv~GvE~mS 165 (452)
T PLN02287 150 AGFYDIGIGAGVESMT 165 (452)
T ss_pred cCCCCeEEEEeEEecC
Confidence 9999999999999765
No 77
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=99.27 E-value=4.6e-10 Score=118.56 Aligned_cols=243 Identities=11% Similarity=0.126 Sum_probs=159.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcC
Q 009313 198 ASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQAN 277 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g 277 (537)
+++|+..|++++++ |++ ++||.+|+++.... ....+..+....|++.+++++.++ .+|++|+.|+..|.+.+++|
T Consensus 25 ~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~-~~~~~r~~~~~~Gl~~~~p~~tV~-~~CaSG~~Ai~~a~~~I~sG 99 (361)
T PRK06690 25 VQQLAAPLLTFLSK--GME-REIDDVILGNVVGP-GGNVARLSALEAGLGLHIPGVTID-RQCGAGLEAIRTACHFIQGG 99 (361)
T ss_pred HHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC-cchHHHHHHHHcCCCCCCCceehh-hhhhHHHHHHHHHHHHHHCC
Confidence 46677999999865 896 89999999865322 244455688999998679999999 79999999999999999999
Q ss_pred CCCeEEEEEecccccc-----------cCC---------------------------------------CC---------
Q 009313 278 PNNYAVVVSTEMVGYN-----------WYA---------------------------------------GR--------- 298 (537)
Q Consensus 278 ~~~~aLVVs~E~~S~~-----------~~~---------------------------------------~~--------- 298 (537)
..+.+|+++.|.+|.. ++. +.
T Consensus 100 ~~d~~l~gG~E~ms~~p~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~A~~s~k~a~~a~~n~~~~~ei~~v~ 179 (361)
T PRK06690 100 AGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAEYVAERYNITREMQDEYACLSYKRTLQALEKGYIHEEILSFN 179 (361)
T ss_pred CCCEEEEeccccccCCCcccccccCcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeccc
Confidence 9999999999998741 100 00
Q ss_pred ------Cc-C-----------CC---------ccccccccceEEEEEeccCcccc---ccceeeeeEEEEEeccCCCccc
Q 009313 299 ------DR-S-----------MM---------IPNCFFRMGCSAILMSNRRRDYH---RAKYRLQLIVRTHTGADDRSFR 348 (537)
Q Consensus 299 ------dr-~-----------~l---------l~~~lfgDGAAAvLLs~~~~~~~---~~~~~L~~~v~t~~~sd~~~~~ 348 (537)
-| + .. ...|..+|||+|+||.++...+. ++.+++.+ ....+.
T Consensus 180 ~~~d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~~~~~~~DGAaAvvl~s~e~A~~lg~~p~~~i~~---~~~~~~----- 251 (361)
T PRK06690 180 GLLDESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVMEEGQARKLGYKPVLRFVR---SAVVGV----- 251 (361)
T ss_pred CccccccCCCCCHHHHhhcCCCcccCCCceeccccCCCCCCeEEEEEecHHHHHHcCCCceEEEEE---EEEecc-----
Confidence 00 0 00 00133467777777776542210 00011111 100000
Q ss_pred cceeccccccccccccchhhhhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCc
Q 009313 349 SVYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDY 428 (537)
Q Consensus 349 ~v~~~~d~~G~~g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf 428 (537)
.|...+ .......++++++ +|+++
T Consensus 252 -----------------------------------~~~~~~------~~~~~a~~~al~~----------Agl~~----- 275 (361)
T PRK06690 252 -----------------------------------DPNLPG------TGPIFAVNKLLNE----------MNMKV----- 275 (361)
T ss_pred -----------------------------------Ccccch------hHHHHHHHHHHHH----------cCCCH-----
Confidence 000000 0011234677776 89987
Q ss_pred cccccEEEEcCCCHHHHHHHHHHcCCChhhhhhh---hhccccccccccchHHHHHHHHHHcCCCCCCCE-EEEEEEchH
Q 009313 429 KLAFEHFCVHAASKTVLDELQKNLELSEKNMEAS---RMTLHRFGNTSSSSIWYELAYLEAKERVKRGDR-VWQIAFGSG 504 (537)
Q Consensus 429 ~~did~~~~H~~g~~vl~~l~~~Lgl~~e~~~~S---~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd~-VlliafGsG 504 (537)
+|||+|.+|+..........+.||++++++..+ ....|.+|+||+..+.-.+.++.++| |.+ +.-++.|.|
T Consensus 276 -~Did~~ei~eafa~~~~~~~e~lgl~~~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~~~~----~~~g~~~~c~~gG 350 (361)
T PRK06690 276 -EDIDYFEINEAFASKVVACAKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAKRED----MKYGIATLGIGGG 350 (361)
T ss_pred -HHcCEeeecchhHHHHHHHHHhcCCCchhcccCCcHHhccCchhhhHHHHHHHHHHHHHHhC----CCEEEEEEcccCc
Confidence 999999999999999999999999998888532 22378899999999998888886542 222 334445555
Q ss_pred HHhhheeEEEe
Q 009313 505 FKCNSVVWQAM 515 (537)
Q Consensus 505 ~~~~s~v~r~~ 515 (537)
.. .+++|+.+
T Consensus 351 ~g-~a~~~e~~ 360 (361)
T PRK06690 351 IG-LALLFEKV 360 (361)
T ss_pred ce-eEEEEEec
Confidence 33 45666543
No 78
>PRK06158 thiolase; Provisional
Probab=99.26 E-value=5.3e-10 Score=119.19 Aligned_cols=86 Identities=13% Similarity=0.024 Sum_probs=73.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCC
Q 009313 199 SMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANP 278 (537)
Q Consensus 199 ~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~ 278 (537)
.+|+.+|++++|+++|++++|||.+|+++. +...|+ ..+++.+|++ +.+.+++. .||+++..++..|..+|++|.
T Consensus 29 ~eL~~eA~~~Al~dAgl~~~dID~iv~~~~-~~~~~~--~~la~~lGl~-~~~~~~~~-~g~~s~~~al~~A~~~I~sG~ 103 (384)
T PRK06158 29 MELLAQAAHRALADAGLTMADVDGLFTASP-DDALWG--LSVAEYLGIR-PRFVDGTM-IGGSSFLAHLLPAALALEAGL 103 (384)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecC-CCCCcH--HHHHHHcCCC-Ceeecccc-CccHHHHHHHHHHHHHHHcCC
Confidence 455799999999999999999999998763 233443 5799999997 57889998 799999999999999999999
Q ss_pred CCeEEEE-Eecc
Q 009313 279 NNYAVVV-STEM 289 (537)
Q Consensus 279 ~~~aLVV-s~E~ 289 (537)
.++|||+ +.|.
T Consensus 104 ~d~vLV~~g~~~ 115 (384)
T PRK06158 104 CDVALICYGSNQ 115 (384)
T ss_pred CCEEEEeecccc
Confidence 9999998 4443
No 79
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.26 E-value=7.1e-10 Score=118.08 Aligned_cols=302 Identities=13% Similarity=0.112 Sum_probs=176.3
Q ss_pred CceEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeEEccCCccccccccchhhhhhhhHHH
Q 009313 121 RSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASM 200 (537)
Q Consensus 121 ~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~p~~~~~ma~~~~ea~~ 200 (537)
++|.|.|+|+.-|- - . .+++.+.+.. | ++||+.-+-.+. ....+ .........+...
T Consensus 2 ~rVvITG~G~vsp~--G-~-~~~~~~~l~~-G---------------~sgi~~~~~~~~-~~~~~--~~~~~~~~~~~~~ 58 (381)
T PRK05952 2 MKVVVTGIGLVSAL--G-D-LEQSWQRLLQ-G---------------KSGIKLHQPFPE-LPPLP--LGLIGNQPSSLED 58 (381)
T ss_pred CeEEEEeeEEECcc--c-C-HHHHHHHHHc-C---------------CCCeEeCCcccc-ccccc--ceeeccccccccH
Confidence 36999999999998 3 3 7888877642 1 244442111100 00000 0000000011233
Q ss_pred HHHHHHHHHHHhCCCCC--CCccEEEEeccCC--------------------C--------CCc-cHHHHHHHHcCCCCC
Q 009313 201 VMFGALDELFEKTKVRP--KDVGILVVNCSIF--------------------N--------PTP-SLSAMIINHYKMRGN 249 (537)
Q Consensus 201 l~~~Aa~~aL~~agi~~--~dId~LI~~ss~~--------------------~--------~~P-s~a~~I~~~lGl~~~ 249 (537)
++..|+++||+++|+++ +++++++-++... . ..| ..+..|+..+|++
T Consensus 59 ~~~~a~~~Al~dagl~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~-- 136 (381)
T PRK05952 59 LTKTVVTAALKDAGLTPPLTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQ-- 136 (381)
T ss_pred HHHHHHHHHHHhcCCCCCCCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCC--
Confidence 55689999999999964 5566555332100 0 122 2477899999998
Q ss_pred eeEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEecc-cccc----c-----C-----CCCCcCCCccccccccceE
Q 009313 250 IISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEM-VGYN----W-----Y-----AGRDRSMMIPNCFFRMGCS 314 (537)
Q Consensus 250 ~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~-~S~~----~-----~-----~~~dr~~ll~~~lfgDGAA 314 (537)
-+++.+. .+|++++.||..|.++|+.|..+.+||.++|. ++.. + . .+-|+.. ...++|||++
T Consensus 137 Gp~~ti~-~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~rPfd~~r--~G~v~gEGaa 213 (381)
T PRK05952 137 GPVLAPM-AACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKTGAYPFDRQR--EGLVLGEGGA 213 (381)
T ss_pred Ccccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCCCCCCCCCCCC--CCccccccEE
Confidence 4899999 69999999999999999999999999999996 4321 0 0 1112111 2478999999
Q ss_pred EEEEeccCccccc-c-ceeeeeEEEEEeccCCCccccceeccccccccccccchhhhhhhcccccccccccCCCccccch
Q 009313 315 AILMSNRRRDYHR-A-KYRLQLIVRTHTGADDRSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSE 392 (537)
Q Consensus 315 AvLLs~~~~~~~~-~-~~~L~~~v~t~~~sd~~~~~~v~~~~d~~G~~g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se 392 (537)
++||++......+ + .|- .+......+|+... ..+ ...+ +
T Consensus 214 ~lvLe~~~~A~~rg~~i~a--~I~g~~~~~d~~~~---~~~----------------~~~~------------------~ 254 (381)
T PRK05952 214 ILVLESAELAQKRGAKIYG--QILGFGLTCDAYHM---SAP----------------EPDG------------------K 254 (381)
T ss_pred EEEEeeHHHHHhCCCceEE--EEEEEEecCCCCCC---CCC----------------CCCH------------------H
Confidence 9999976532211 1 121 11212222222110 000 0000 0
Q ss_pred hhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccEEEEcCCCHHHHHHH-----HHHcCCChhhhhhhhhccc
Q 009313 393 QLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVHAASKTVLDEL-----QKNLELSEKNMEASRMTLH 467 (537)
Q Consensus 393 ~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H~~g~~vl~~l-----~~~Lgl~~e~~~~S~~~l~ 467 (537)
......+++++. +++.+ +|||++..|..|...-|.. .+-++- ++.- ..+=.
T Consensus 255 ----~~~~ai~~Al~~----------agi~p------~dId~i~~hgtgt~~~D~~E~~al~~~fg~---~~~v-~s~K~ 310 (381)
T PRK05952 255 ----SAIAAIQQCLAR----------SGLTP------EDIDYIHAHGTATRLNDQREANLIQALFPH---RVAV-SSTKG 310 (381)
T ss_pred ----HHHHHHHHHHHH----------hCCCH------HHeeEEEccCCCCCCCcHHHHHHHHHHcCC---CCee-ecchh
Confidence 011223556665 88987 9999999998887665544 344441 2210 12334
Q ss_pred cccccccchHHHHHHHH---HHcCCCCC---------------------CCEEEEEEEchHHHhhheeEE
Q 009313 468 RFGNTSSSSIWYELAYL---EAKERVKR---------------------GDRVWQIAFGSGFKCNSVVWQ 513 (537)
Q Consensus 468 r~GNtsSaSi~~~La~~---~~~g~l~~---------------------Gd~VlliafGsG~~~~s~v~r 513 (537)
.+||+.+++-.+++... ++++.+.+ =++++..+||.|-.-.++|++
T Consensus 311 ~~GH~~~AaG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~v~~~~~~~~~~~l~~s~gfGG~na~lvl~ 380 (381)
T PRK05952 311 ATGHTLGASGALGVAFSLLALRHQQLPPCVGLQEPEFDLNFVRQAQQSPLQNVLCLSFGFGGQNAAIALG 380 (381)
T ss_pred hhccChHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcCCCcccCCCCEEEEeeecCCCeeEEEEEe
Confidence 68999999987777653 33444322 246788888888777777765
No 80
>PRK08256 lipid-transfer protein; Provisional
Probab=99.25 E-value=5.8e-10 Score=119.14 Aligned_cols=90 Identities=17% Similarity=0.144 Sum_probs=74.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcC
Q 009313 198 ASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQAN 277 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g 277 (537)
..+++..|++++|+++|++++|||.+++++....... ...+...+|++ ++++++++ .+|++++.+|..|.++|++|
T Consensus 22 ~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~--~~~~~~~lGl~-~~~~~~v~-~~caSg~~ai~~A~~~I~sG 97 (391)
T PRK08256 22 YPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS--GQRALYEVGMT-GIPIVNVN-NNCSTGSTALFLARQAVRSG 97 (391)
T ss_pred HHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch--hHHHHHHcCCC-CCCCcccc-cccHHHHHHHHHHHHHHHCC
Confidence 3466799999999999999999999887754321111 23467789997 57889999 79999999999999999999
Q ss_pred CCCeEEEEEecccc
Q 009313 278 PNNYAVVVSTEMVG 291 (537)
Q Consensus 278 ~~~~aLVVs~E~~S 291 (537)
..+++||+++|.+|
T Consensus 98 ~~d~vLv~g~e~~s 111 (391)
T PRK08256 98 AADCALALGFEQMQ 111 (391)
T ss_pred CCCEEEEEEEeecc
Confidence 99999999988764
No 81
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=99.24 E-value=1.1e-09 Score=116.93 Aligned_cols=90 Identities=10% Similarity=0.051 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCC--CccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHc
Q 009313 199 SMVMFGALDELFEKTKVRPKDVGILVVNCSIFNP--TPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQA 276 (537)
Q Consensus 199 ~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~--~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~ 276 (537)
.+++.+|++++|+++|++++|||.+|+++.++.. .+..+..+++.+|+. +.+++++. +||++|..++..|...+++
T Consensus 30 ~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~-~~~~~~V~-~~gasG~~al~~A~~~I~s 107 (392)
T PRK06065 30 QELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGI-RKPVSRVY-VGGATGVMTAIAGWYHVAS 107 (392)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCC-CCCeEEEe-cCchhHHHHHHHHHHHHhC
Confidence 4557999999999999999999999987644322 466788899999997 48999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccc
Q 009313 277 NPNNYAVVVSTEMV 290 (537)
Q Consensus 277 g~~~~aLVVs~E~~ 290 (537)
|..++||||+.|.+
T Consensus 108 G~ad~vLVvg~e~~ 121 (392)
T PRK06065 108 GLCQKVLAVAEEKM 121 (392)
T ss_pred CCCCEEEEEEeecc
Confidence 99999999999974
No 82
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=99.23 E-value=7.5e-10 Score=118.43 Aligned_cols=93 Identities=18% Similarity=0.140 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCC-CCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHc
Q 009313 198 ASMVMFGALDELFEKTKVRPKDVGILVVNCSIF-NPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQA 276 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~-~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~ 276 (537)
..+++.+|++++|+++|++++|||.+|+++... ...+..+..++..+|++.+++++.++ .+|+++..++..|.+.|++
T Consensus 25 ~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~v~-~~caSg~~av~~Aa~~I~s 103 (394)
T PLN02644 25 ATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTICTTVN-KVCASGMKAVMLAAQSIQL 103 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCceEEEe-ccchHHHHHHHHHHHHHHc
Confidence 356679999999999999999999999876431 11234455688999997668999999 7999999999999999999
Q ss_pred CCCCeEEEEEecccc
Q 009313 277 NPNNYAVVVSTEMVG 291 (537)
Q Consensus 277 g~~~~aLVVs~E~~S 291 (537)
|..+.+||++.|.+|
T Consensus 104 G~~d~vlv~G~E~~s 118 (394)
T PLN02644 104 GINDVVVAGGMESMS 118 (394)
T ss_pred CCCCEEEEEeEEecC
Confidence 999999999988765
No 83
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=99.23 E-value=4.1e-10 Score=120.18 Aligned_cols=95 Identities=16% Similarity=0.277 Sum_probs=82.9
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHH
Q 009313 197 EASMVMFGALDELFEKTKVRPKDVGILVVNCSI-FNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQ 275 (537)
Q Consensus 197 ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~-~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~ 275 (537)
.+++|+..|++++|+++|++|+|||.+|+++.. ...-...+.+++...|++.+++++.|+ ++|++|+.|+..|...++
T Consensus 26 ~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~~~V~-~~CaSG~~Ai~~A~~~I~ 104 (392)
T PRK06633 26 PAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYTIN-KVCGSGLKSVALAANSIM 104 (392)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCccchhhc-chhHHHHHHHHHHHHHHH
Confidence 356677999999999999999999999998653 222345677788999998679999999 799999999999999999
Q ss_pred cCCCCeEEEEEeccccc
Q 009313 276 ANPNNYAVVVSTEMVGY 292 (537)
Q Consensus 276 ~g~~~~aLVVs~E~~S~ 292 (537)
+|..+.+|+++.|.+|.
T Consensus 105 sG~~dvvla~G~E~ms~ 121 (392)
T PRK06633 105 TGDNEIVIAGGQENMSL 121 (392)
T ss_pred cCCCCEEEEcccccCCC
Confidence 99999999999998874
No 84
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.23 E-value=6.6e-10 Score=119.27 Aligned_cols=316 Identities=12% Similarity=0.074 Sum_probs=176.9
Q ss_pred CceEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeEEccCCcccccc-ccchhhhhhhhHH
Q 009313 121 RSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEE-NCMTMKHGRLEAS 199 (537)
Q Consensus 121 ~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~p~-~~~~ma~~~~ea~ 199 (537)
++|.|.|+|+-.|-. .+.+++.+.+.. |+ +. ++...+.-...++..+....-.....+. .............
T Consensus 2 ~~VvITG~g~vtp~G---~~~~~~~~~L~~-g~-s~--i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~r~~~~~~ 74 (405)
T PRK09116 2 RRVVVTGMGGVTALG---EDWQTIAARLKA-GR-NA--VRRMPEWDRYDGLNTRLAAPIDDFELPAHYTRKKIRSMGRVS 74 (405)
T ss_pred CCEEEEeeEEECCCC---CCHHHHHHHHHc-CC-CC--EEeCCchhhccCCCCceEEEecCcChhHhcCHHHHhhCCHHH
Confidence 479999999999973 788999887643 11 00 0000000000122111111000000000 0011111123456
Q ss_pred HHHHHHHHHHHHhCCCCC------CCccEEEEeccCC------------------C--------CCcc-HHHHHHHHcCC
Q 009313 200 MVMFGALDELFEKTKVRP------KDVGILVVNCSIF------------------N--------PTPS-LSAMIINHYKM 246 (537)
Q Consensus 200 ~l~~~Aa~~aL~~agi~~------~dId~LI~~ss~~------------------~--------~~Ps-~a~~I~~~lGl 246 (537)
+++..|+++||+++|+.. +++++++ +++.. . ..|+ .+.+|+..||+
T Consensus 75 ~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~-Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~ 153 (405)
T PRK09116 75 LMATRASELALEDAGLLGDPILTDGRMGIAY-GSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFGL 153 (405)
T ss_pred HHHHHHHHHHHHHcCCCCccccCCCcEEEEE-eecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhCC
Confidence 789999999999999832 3344444 43210 0 1232 57889999999
Q ss_pred CCCeeEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEecccccc----c----------------CCCCCcCCCccc
Q 009313 247 RGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYN----W----------------YAGRDRSMMIPN 306 (537)
Q Consensus 247 ~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~----~----------------~~~~dr~~ll~~ 306 (537)
+ -+++.++ .+|++++.||..|.++|++|..+.+||.++|.++.. | .++-|++. ..
T Consensus 154 ~--Gp~~ti~-~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~--~G 228 (405)
T PRK09116 154 K--GRVIPTS-SACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEAAVFDTLFATSTRNDAPELTPRPFDANR--DG 228 (405)
T ss_pred C--CCccccc-chhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHHHHHHHHhhhhccCCCCCCCCCCCCcCCC--CC
Confidence 8 4899999 699999999999999999999999999999975430 0 01112111 25
Q ss_pred cccccceEEEEEeccCccccccceeeee-EEEEEeccCCCccccceeccccccccccccchhhhhhhcccccccccccCC
Q 009313 307 CFFRMGCSAILMSNRRRDYHRAKYRLQL-IVRTHTGADDRSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTLGP 385 (537)
Q Consensus 307 ~lfgDGAAAvLLs~~~~~~~~~~~~L~~-~v~t~~~sd~~~~~~v~~~~d~~G~~g~~ls~dl~~~~g~~lk~ni~~lgp 385 (537)
.+.|+|++++||++......+ +-++.. +......+|+.. +.. |
T Consensus 229 ~v~gEGa~~~vLe~~~~A~~r-ga~i~a~i~g~~~~~d~~~---~~~--------------------------------p 272 (405)
T PRK09116 229 LVIGEGAGTLVLEELEHAKAR-GATIYAEIVGFGTNSDGAH---VTQ--------------------------------P 272 (405)
T ss_pred EeeeccEEEEEEccHHHHHhC-CCceEEEEEEEEEcCCCCc---CCC--------------------------------C
Confidence 788999999999975432111 111111 111111222110 000 0
Q ss_pred CccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccEEEEcCCCHHH-----HHHHHHHcCCChhhhh
Q 009313 386 LVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVHAASKTV-----LDELQKNLELSEKNME 460 (537)
Q Consensus 386 ~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H~~g~~v-----l~~l~~~Lgl~~e~~~ 460 (537)
. .+ ......+++++. +++++ +|||++..|..|... ...+.+.+|-. -.+
T Consensus 273 ~----~~----~~~~ai~~AL~~----------Agi~p------~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg~~-~pv- 326 (405)
T PRK09116 273 Q----AE----TMQIAMELALKD----------AGLAP------EDIGYVNAHGTATDRGDIAESQATAAVFGAR-MPI- 326 (405)
T ss_pred C----HH----HHHHHHHHHHHH----------hCCCH------HHcCEEECcCccCCCCCHHHHHHHHHHhCCC-Cee-
Confidence 0 00 011223566665 78887 999999999766644 34455666621 112
Q ss_pred hhhhccccccccccchHHHHHHHH---HHcCCC-------------------------CCCCEEEEEEEchHHHhhheeE
Q 009313 461 ASRMTLHRFGNTSSSSIWYELAYL---EAKERV-------------------------KRGDRVWQIAFGSGFKCNSVVW 512 (537)
Q Consensus 461 ~S~~~l~r~GNtsSaSi~~~La~~---~~~g~l-------------------------~~Gd~VlliafGsG~~~~s~v~ 512 (537)
-.+=..+||+..++-.+++... +++|.+ .+.+.++..+||-|-.-.++|+
T Consensus 327 --~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ippt~~~~~~~~~~~~l~~v~~~~~~~~~~~~l~nsfGfGG~n~~lvl 404 (405)
T PRK09116 327 --SSLKSYFGHTLGACGALEAWMSIEMMNEGWFAPTLNLTQVDPACGALDYIMGEAREIDTEYVMSNNFAFGGINTSLIF 404 (405)
T ss_pred --ECcchhhcccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCcccCccCCCCccCCCCEEEEeeecCCcccEEEEE
Confidence 1233468999777766655432 222221 1235678888998877777776
Q ss_pred E
Q 009313 513 Q 513 (537)
Q Consensus 513 r 513 (537)
+
T Consensus 405 ~ 405 (405)
T PRK09116 405 K 405 (405)
T ss_pred C
Confidence 4
No 85
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=99.22 E-value=7.3e-10 Score=118.95 Aligned_cols=92 Identities=12% Similarity=0.192 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHhC-CCCCCCccEEEEeccC-C-CCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHH
Q 009313 199 SMVMFGALDELFEKT-KVRPKDVGILVVNCSI-F-NPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQ 275 (537)
Q Consensus 199 ~~l~~~Aa~~aL~~a-gi~~~dId~LI~~ss~-~-~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~ 275 (537)
.+++.+|++++|+++ |++++|||.+|+++.. + ...+..+..++..+|++ +++++.++ .+|++|..++..|.+.++
T Consensus 28 ~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~-~~p~~~v~-~~caSG~~av~~Aa~~I~ 105 (406)
T PRK07851 28 DDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD-FLPGTTVN-RYCSSSLQTTRMAFHAIK 105 (406)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-CCCeeeee-ccchhHHHHHHHHHHHHH
Confidence 566799999999996 9999999999987532 2 22356678899999996 58999999 799999999999999999
Q ss_pred cCCCCeEEEEEeccccc
Q 009313 276 ANPNNYAVVVSTEMVGY 292 (537)
Q Consensus 276 ~g~~~~aLVVs~E~~S~ 292 (537)
+|..+.+||++.|.+|.
T Consensus 106 sG~~d~vLv~G~e~~s~ 122 (406)
T PRK07851 106 AGEGDVFISAGVETVSR 122 (406)
T ss_pred CCCCCEEEEeeEEeccc
Confidence 99999999999998654
No 86
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.22 E-value=5.5e-10 Score=119.41 Aligned_cols=94 Identities=12% Similarity=0.065 Sum_probs=79.9
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCccHHHH-HHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHH
Q 009313 197 EASMVMFGALDELFEKTKVRPKDVGILVVNCS-IFNPTPSLSAM-IINHYKMRGNIISYNLGGMGCSAGVIGVDLARDML 274 (537)
Q Consensus 197 ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss-~~~~~Ps~a~~-I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL 274 (537)
.+.+++..|++++|+++|++|+|||.+|++++ ++...+..+.. +++.+|+. ++++++|+ .+|++|+.|+..|..+|
T Consensus 22 ~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~-~~p~~~V~-~~Casg~~al~~A~~~I 99 (393)
T cd00826 22 LAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQ-EAPAIGMN-NLCGSGLRALALAMQLI 99 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCC-CCcEEEec-chhHHHHHHHHHHHHHH
Confidence 34677899999999999999999999998875 34334555553 67778886 69999999 79999999999999999
Q ss_pred HcCCCCeEEEEEeccccc
Q 009313 275 QANPNNYAVVVSTEMVGY 292 (537)
Q Consensus 275 ~~g~~~~aLVVs~E~~S~ 292 (537)
++|..+++||+++|.+|.
T Consensus 100 ~sG~~~~vlv~g~e~~s~ 117 (393)
T cd00826 100 AGGDANCILAGGFEKMET 117 (393)
T ss_pred HCCCCCEEEEEeeecccc
Confidence 999999999999998753
No 87
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.22 E-value=1.8e-09 Score=115.93 Aligned_cols=176 Identities=13% Similarity=0.088 Sum_probs=116.5
Q ss_pred CceEEEEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeE-E---------c-cCCcccccc--c
Q 009313 121 RSVYLVDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDET-Y---------I-PKVVMSAEE--N 187 (537)
Q Consensus 121 ~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~-~---------~-~~~~~~~p~--~ 187 (537)
++|.|+|+|+..|-. .+.+++.+.+.. | ++||++-. + . ....+ .|+ .
T Consensus 2 ~~v~ItG~g~vsp~G---~~~~~~~~~L~~-G---------------~s~i~~~~~~~~~~~~~~~~g~i~~f-~~~~~~ 61 (406)
T PRK08439 2 KRVVVTGIGMINSLG---LNKESSFKAICN-G---------------ECGIKKITLFDASDFPVQIAGEITDF-DPTEVM 61 (406)
T ss_pred CCEEEEeeEEECCCc---CCHHHHHHHHHc-C---------------CCceEeCCCccccCCCCceeEEcCCc-ChhhcC
Confidence 479999999999983 678888887653 2 12222110 0 0 00000 000 0
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCcc----EEEEeccCC--------------------------CCCc-cH
Q 009313 188 CMTMKHGRLEASMVMFGALDELFEKTKVRPKDVG----ILVVNCSIF--------------------------NPTP-SL 236 (537)
Q Consensus 188 ~~~ma~~~~ea~~l~~~Aa~~aL~~agi~~~dId----~LI~~ss~~--------------------------~~~P-s~ 236 (537)
............+++..|+.++|+++|+++++++ .++++++.. ...| ..
T Consensus 62 ~~~~~~~~~~~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (406)
T PRK08439 62 DPKEVKKADRFIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNML 141 (406)
T ss_pred CHHHHhhcCHHHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHH
Confidence 0111122245678999999999999999887765 244443210 0112 46
Q ss_pred HHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEeccc-ccc---------c-----------C
Q 009313 237 SAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMV-GYN---------W-----------Y 295 (537)
Q Consensus 237 a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~-S~~---------~-----------~ 295 (537)
+..|...+|++ .+++.+. .+|++++.||..|.++|++|..+.+||+++|.. +.. . .
T Consensus 142 a~~is~~~gl~--Gp~~~~~-~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~ 218 (406)
T PRK08439 142 GGFISIEHGLK--GPNLSSV-TACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKAS 218 (406)
T ss_pred HHHHHHHhCCC--CCccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCc
Confidence 78899999998 4788899 699999999999999999999999999999963 210 0 0
Q ss_pred CC--CCcCCCccccccccceEEEEEeccCc
Q 009313 296 AG--RDRSMMIPNCFFRMGCSAILMSNRRR 323 (537)
Q Consensus 296 ~~--~dr~~ll~~~lfgDGAAAvLLs~~~~ 323 (537)
++ .+|+ ..++|+|++++||++...
T Consensus 219 rpfd~~~~----G~v~gEGa~~lvLe~~~~ 244 (406)
T PRK08439 219 RPFDKDRD----GFVMGEGAGALVLEEYES 244 (406)
T ss_pred CCccCCCC----cEEeeCceEEEEEccHHH
Confidence 11 1233 478999999999997543
No 88
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=99.22 E-value=1.2e-09 Score=116.60 Aligned_cols=94 Identities=11% Similarity=0.211 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCC-CccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHH
Q 009313 198 ASMVMFGALDELFEKTKVRPKDVGILVVNCSI-FNP-TPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQ 275 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~-~~~-~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~ 275 (537)
+.+|+..|++++|+++|++|+|||.++++|.. ... ....+..+....|++.+++++.|+ ++|++|+.|+..|.+.++
T Consensus 26 ~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~p~~tV~-~~CaSG~~A~~~A~~~I~ 104 (387)
T PRK07850 26 AAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHVGATTID-CQCGSAQQANHLVAGLIA 104 (387)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCCceEEEe-cccccHHHHHHHHHHHHH
Confidence 45677999999999999999999999998764 222 234566778889998679999999 899999999999999999
Q ss_pred cCCCCeEEEEEeccccc
Q 009313 276 ANPNNYAVVVSTEMVGY 292 (537)
Q Consensus 276 ~g~~~~aLVVs~E~~S~ 292 (537)
+|..+.+|+++.|.+|.
T Consensus 105 sG~~dvvla~G~E~mS~ 121 (387)
T PRK07850 105 AGAIDVGIACGVEAMSR 121 (387)
T ss_pred CCCCCEEEEEeEecCCC
Confidence 99999999999999864
No 89
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=99.21 E-value=1.3e-09 Score=116.40 Aligned_cols=92 Identities=15% Similarity=0.123 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CC--CCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHH
Q 009313 198 ASMVMFGALDELFEKTKVRPKDVGILVVNCSI-FN--PTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDML 274 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~-~~--~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL 274 (537)
..+|+.+|++++|+++|++++|||.+|++++. .. ..+..+..+...+|++ ++++++++ ++|++|+.||..|.+++
T Consensus 22 ~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~-~~p~~~v~-~~CaSg~~Al~~A~~~I 99 (389)
T PRK07516 22 LESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALR-FKPATRVE-NACATGSAAVYAALDAI 99 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCC-CCceeeec-cccHHHHHHHHHHHHHH
Confidence 35667999999999999999999999987642 11 1111122334456876 68999999 79999999999999999
Q ss_pred HcCCCCeEEEEEecccc
Q 009313 275 QANPNNYAVVVSTEMVG 291 (537)
Q Consensus 275 ~~g~~~~aLVVs~E~~S 291 (537)
++|..+++||++.|.+|
T Consensus 100 ~sG~~d~vLvvg~e~~s 116 (389)
T PRK07516 100 EAGRARIVLVVGAEKMT 116 (389)
T ss_pred HCCCCCEEEEEEehhhc
Confidence 99999999999999854
No 90
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=99.19 E-value=1.4e-09 Score=116.40 Aligned_cols=95 Identities=13% Similarity=0.152 Sum_probs=84.3
Q ss_pred hHHHHHHHHHHHHHHh-CCCCCCCccEEEEeccC--CCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHH
Q 009313 197 EASMVMFGALDELFEK-TKVRPKDVGILVVNCSI--FNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDM 273 (537)
Q Consensus 197 ea~~l~~~Aa~~aL~~-agi~~~dId~LI~~ss~--~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~l 273 (537)
.+++++..|++++|++ +|++|++||.+|++|.. ...-+..+.++....|++.+++++.|+ +.|++|+.|+.+|.+.
T Consensus 25 ~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~vp~~tV~-~~CaSG~~Av~~A~~~ 103 (400)
T PRK13359 25 RADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGVPGSTIN-RLCGSGMDAVGVAARA 103 (400)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEe-ccchhHHHHHHHHHHH
Confidence 3466779999999997 59999999999998764 222377888999999999779999999 8999999999999999
Q ss_pred HHcCCCCeEEEEEeccccc
Q 009313 274 LQANPNNYAVVVSTEMVGY 292 (537)
Q Consensus 274 L~~g~~~~aLVVs~E~~S~ 292 (537)
+++|..+.+|+++.|.+|.
T Consensus 104 I~sG~~divlagGvEsmS~ 122 (400)
T PRK13359 104 IKSGEAALMIAGGVESMSR 122 (400)
T ss_pred HHcCCCCEEEEeeeeccCC
Confidence 9999999999999999886
No 91
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=99.19 E-value=1.4e-09 Score=117.46 Aligned_cols=94 Identities=15% Similarity=0.221 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCC-CccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHc
Q 009313 198 ASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNP-TPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQA 276 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~-~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~ 276 (537)
..+|+..|++++|+++|++|++||.+|+++..... .+.++.+++...|++..++++.|+ ++|++|+.|+..|...+++
T Consensus 29 ~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P~~tV~-~aCaSG~~Ai~~Aa~~I~s 107 (428)
T PRK08963 29 AVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVS-RACATSFQAVANVAESIMA 107 (428)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCcceeeh-hhhHHHHHHHHHHHHHHHC
Confidence 35667999999999999999999999998764322 355677799999998669999999 7999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 009313 277 NPNNYAVVVSTEMVGY 292 (537)
Q Consensus 277 g~~~~aLVVs~E~~S~ 292 (537)
|..+.+||++.|.+|.
T Consensus 108 G~~dvvLvgG~Esms~ 123 (428)
T PRK08963 108 GTIDIGIAGGADSSSV 123 (428)
T ss_pred CCCCEEEEecccccCC
Confidence 9999999999998874
No 92
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=99.19 E-value=3.5e-09 Score=117.21 Aligned_cols=317 Identities=12% Similarity=0.100 Sum_probs=178.7
Q ss_pred CceEEEEEeEEeCCCCcccCHHHHHHHHhccCC--CChhhHHHHHHHHHHcCCceeE--EccCCccccccccchhhhhhh
Q 009313 121 RSVYLVDFACYRPSDDLKVTREQFIEVAGKWSK--SDEASLDFQRRIMKSSGIGDET--YIPKVVMSAEENCMTMKHGRL 196 (537)
Q Consensus 121 ~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~--~~~~~~~f~~~i~~~sGI~~r~--~~~~~~~~~p~~~~~ma~~~~ 196 (537)
++|.|+|+|+..|-. .+.++|.+.+.. |. +++-+ +| ....+..+. ..+ +................
T Consensus 129 ~rVvITG~G~vtp~G---~~~~~~w~~L~~-G~s~i~~~~-~f-----~~~~~~~~~ag~i~-~f~~~~~l~~k~~r~md 197 (540)
T PLN02787 129 RRVVVTGMGVVSPLG---HDPDVFYNNLLE-GVSGISEIE-RF-----DCSQFPTRIAGEIK-SFSTDGWVAPKLSKRMD 197 (540)
T ss_pred CCEEEEeeEEECCCC---CCHHHHHHHHHc-CCCcccccC-cc-----chhhCCcccccccc-ccChhhcCCHHHHHhCC
Confidence 589999999999983 678888887643 11 01000 00 001111110 000 00000000111112223
Q ss_pred hHHHHHHHHHHHHHHhCCCCCC--------CccEEEEeccCC-------------------CC------Cc-cHHHHHHH
Q 009313 197 EASMVMFGALDELFEKTKVRPK--------DVGILVVNCSIF-------------------NP------TP-SLSAMIIN 242 (537)
Q Consensus 197 ea~~l~~~Aa~~aL~~agi~~~--------dId~LI~~ss~~-------------------~~------~P-s~a~~I~~ 242 (537)
....++..|++++|+++|++++ .+++ +++++.. .+ .+ ..+.+|+.
T Consensus 198 ~~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV-~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~ 276 (540)
T PLN02787 198 KFMLYLLTAGKKALADGGITEDVMKELDKTKCGV-LIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAM 276 (540)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccccCCCceEE-EEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHH
Confidence 4567889999999999998753 2344 4444310 00 11 23678999
Q ss_pred HcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEeccc-ccc----c----------------CCCCCcC
Q 009313 243 HYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMV-GYN----W----------------YAGRDRS 301 (537)
Q Consensus 243 ~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~-S~~----~----------------~~~~dr~ 301 (537)
.+|++ .+.+.++ .+|++++.||..|.++|+.|..+.+||.++|.. +.. | .++-|+.
T Consensus 277 ~~gl~--Gp~~tis-tACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~~ 353 (540)
T PLN02787 277 DLGWM--GPNYSIS-TACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMN 353 (540)
T ss_pred HhCCC--CCccccc-cccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcccC
Confidence 99997 5899999 699999999999999999999999999999962 210 0 0111211
Q ss_pred CCccccccccceEEEEEeccCccccccceeeeeEE-EEEeccCCCccccceeccccccccccccchhhhhhhcccccccc
Q 009313 302 MMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIV-RTHTGADDRSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALKTNI 380 (537)
Q Consensus 302 ~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v-~t~~~sd~~~~~~v~~~~d~~G~~g~~ls~dl~~~~g~~lk~ni 380 (537)
. ...++|+||+++||++......+ +-++...+ ......|+ +. +..+. .+ +
T Consensus 354 r--dGfv~GEGAa~lVLE~~e~A~~r-Ga~IyA~I~G~g~s~Da--~~-~t~p~-p~---------------g------- 404 (540)
T PLN02787 354 R--DGFVMGEGAGVLLLEELEHAKKR-GANIYAEFLGGSFTCDA--YH-MTEPH-PE---------------G------- 404 (540)
T ss_pred C--CCcccccceEEEEEeeHHHHHHC-CCeeEEEEEEEEEecCC--CC-CCCCC-cC---------------H-------
Confidence 1 25789999999999975432211 11111111 11112222 10 11000 00 0
Q ss_pred cccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccEEEEcCCCHHHHHH-----HHHHcCCC
Q 009313 381 TTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVHAASKTVLDE-----LQKNLELS 455 (537)
Q Consensus 381 ~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H~~g~~vl~~-----l~~~Lgl~ 455 (537)
+ -.....++.++. +|+++ +|||++..|..|...-|. +.+.+|-.
T Consensus 405 -----------~----g~~~am~~AL~~----------AGl~p------~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~~ 453 (540)
T PLN02787 405 -----------A----GVILCIEKALAQ----------SGVSK------EDVNYINAHATSTKAGDLKEYQALMRCFGQN 453 (540)
T ss_pred -----------H----HHHHHHHHHHHH----------cCCCH------HHCcEEEccCccCCCCCHHHHHHHHHHhCCC
Confidence 0 001123556665 89997 999999999887665443 44556632
Q ss_pred hhhhhhhhhccccccccccchHHHHHHHH---HHcCCCC-------------------------CCCEEEEEEEchHHHh
Q 009313 456 EKNMEASRMTLHRFGNTSSSSIWYELAYL---EAKERVK-------------------------RGDRVWQIAFGSGFKC 507 (537)
Q Consensus 456 ~e~~~~S~~~l~r~GNtsSaSi~~~La~~---~~~g~l~-------------------------~Gd~VlliafGsG~~~ 507 (537)
+ .+.- -.+=..+||+.+|+-.+++... +++|.+. +-+.++.-+||-|-.-
T Consensus 454 ~-~~pV-~S~Ks~iGH~~gAAGa~eli~~~lal~~g~iPPt~n~~~pd~~~~~~~~v~~~~~~~~ir~aL~nSfGFGG~N 531 (540)
T PLN02787 454 P-ELRV-NSTKSMIGHLLGAAGAVEAIATVQAIRTGWVHPNINLENPESGVDTKVLVGPKKERLDIKVALSNSFGFGGHN 531 (540)
T ss_pred C-Ccee-eCCCCCcCCCcccchHHHHHHHHHHHhcCCcCCCCCCCCCCccCCcccccccccccCCcCEEEEeeecCCcee
Confidence 1 1210 1233468999988876666543 3333321 1234566788888777
Q ss_pred hheeEEE
Q 009313 508 NSVVWQA 514 (537)
Q Consensus 508 ~s~v~r~ 514 (537)
.++|++.
T Consensus 532 aslvl~~ 538 (540)
T PLN02787 532 SSILFAP 538 (540)
T ss_pred EEEEEEe
Confidence 7777764
No 93
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=99.18 E-value=2.5e-09 Score=114.23 Aligned_cols=94 Identities=10% Similarity=0.194 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccC--CCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHH
Q 009313 198 ASMVMFGALDELFEKTKVRPKDVGILVVNCSI--FNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQ 275 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~--~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~ 275 (537)
.++|+..|++++|+++|++++|||.+|+++.. ....+..+..+.-.-|++.+++++.|+ ++|++|+.|+..|.+.++
T Consensus 26 ~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~vP~~tV~-~~CaSG~~Ai~~A~~~I~ 104 (390)
T PRK06504 26 PADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESVPGTSID-RQCGSSQQALHFAAQAVM 104 (390)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEe-chhhHHHHHHHHHHHHHH
Confidence 46677999999999999999999999998754 111245555555555886689999999 799999999999999999
Q ss_pred cCCCCeEEEEEeccccc
Q 009313 276 ANPNNYAVVVSTEMVGY 292 (537)
Q Consensus 276 ~g~~~~aLVVs~E~~S~ 292 (537)
+|..+.+|+++.|.+|.
T Consensus 105 sG~~dvvLagGvEsmS~ 121 (390)
T PRK06504 105 SGTMDIVIAAGVESMTR 121 (390)
T ss_pred CCCCCEEEEeeeeecCC
Confidence 99999999999998874
No 94
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=99.18 E-value=3e-09 Score=115.24 Aligned_cols=122 Identities=13% Similarity=0.043 Sum_probs=88.5
Q ss_pred hHHHHHHHHHHHHHHhCCCCCC-----CccEEEEeccCC------------------CC--------Cc-cHHHHHHHHc
Q 009313 197 EASMVMFGALDELFEKTKVRPK-----DVGILVVNCSIF------------------NP--------TP-SLSAMIINHY 244 (537)
Q Consensus 197 ea~~l~~~Aa~~aL~~agi~~~-----dId~LI~~ss~~------------------~~--------~P-s~a~~I~~~l 244 (537)
...+++..|+.++|+++|+++. +...++++++.. .. .+ ..+.+|...+
T Consensus 92 ~~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~ 171 (437)
T PLN02836 92 RFIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRY 171 (437)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHh
Confidence 4567899999999999998542 344566664310 00 12 2467899999
Q ss_pred CCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEecccccc----------------------cCCCCCcCC
Q 009313 245 KMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYN----------------------WYAGRDRSM 302 (537)
Q Consensus 245 Gl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~----------------------~~~~~dr~~ 302 (537)
|++ .+++.++ .+|++++.||..|.++|++|..+.+||.++|..... ...+-|+..
T Consensus 172 gl~--Gp~~tv~-~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~~~ 248 (437)
T PLN02836 172 GFQ--GPNHAAV-TACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDCDR 248 (437)
T ss_pred CCC--Cceecee-ChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCcccCC
Confidence 997 5899999 699999999999999999999999999998863110 000111111
Q ss_pred CccccccccceEEEEEeccCc
Q 009313 303 MIPNCFFRMGCSAILMSNRRR 323 (537)
Q Consensus 303 ll~~~lfgDGAAAvLLs~~~~ 323 (537)
..++.||||+|+||++...
T Consensus 249 --~G~~~gEGaaalVLe~~~~ 267 (437)
T PLN02836 249 --DGFVIGEGAGVLVLEELEH 267 (437)
T ss_pred --CCeeeecCEEEEEEeeHHH
Confidence 2578899999999997654
No 95
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=99.18 E-value=4.5e-09 Score=112.62 Aligned_cols=280 Identities=13% Similarity=0.055 Sum_probs=161.0
Q ss_pred CceEEEEEeEEeCCCCcccCHHHHHHHHhccCC--CChhhHHHHHHHHHHcCCceeE--EccCCc--cccccccchhhhh
Q 009313 121 RSVYLVDFACYRPSDDLKVTREQFIEVAGKWSK--SDEASLDFQRRIMKSSGIGDET--YIPKVV--MSAEENCMTMKHG 194 (537)
Q Consensus 121 ~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~--~~~~~~~f~~~i~~~sGI~~r~--~~~~~~--~~~p~~~~~ma~~ 194 (537)
++|.|+|+|+..|-. .+.+++++.+.. |. +.+- .+ +...+...+. ..++.. ...| ......
T Consensus 1 ~~VvItG~G~vsp~G---~~~~~~w~~L~~-G~s~i~~~-----~~-~~~~~~~~~~~g~i~~~~~~~~~~---~~~~~~ 67 (399)
T cd00832 1 RRAVVTGIGVVAPNG---LGVEEYWKAVLD-GRSGLGPI-----TR-FDPSGYPARLAGEVPDFDAAEHLP---GRLLPQ 67 (399)
T ss_pred CCEEEEeeEEeCCCC---CCHHHHHHHHHh-CCCeEeeC-----Cc-cccccCCCceeEEeCCcChhhcCC---HHHHhh
Confidence 469999999999973 678999887643 11 0000 00 0001111000 001000 0011 111122
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCC-----ccEEEEeccC-C-----------------CC--------Cc-cHHHHHHH
Q 009313 195 RLEASMVMFGALDELFEKTKVRPKD-----VGILVVNCSI-F-----------------NP--------TP-SLSAMIIN 242 (537)
Q Consensus 195 ~~ea~~l~~~Aa~~aL~~agi~~~d-----Id~LI~~ss~-~-----------------~~--------~P-s~a~~I~~ 242 (537)
.+...+++..|+.++|+++|+++++ +++ +++++. . .. .+ ..+.+|+.
T Consensus 68 ~d~~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv-~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~ 146 (399)
T cd00832 68 TDRMTRLALAAADWALADAGVDPAALPPYDMGV-VTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISI 146 (399)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCccccCCCceEE-EEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHH
Confidence 2456788999999999999998654 444 444321 0 00 11 24678999
Q ss_pred HcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEecccc-c---------ccC----------CCCCcCC
Q 009313 243 HYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVG-Y---------NWY----------AGRDRSM 302 (537)
Q Consensus 243 ~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S-~---------~~~----------~~~dr~~ 302 (537)
.+|++ .+++.++ .+|++++.||..|.++|++|. +.+||.++|... . ... ++-|+..
T Consensus 147 ~~gl~--Gp~~ti~-~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~ 222 (399)
T cd00832 147 RHGMR--GPSGVVV-AEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAA 222 (399)
T ss_pred HhCCC--CCccccc-chhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCC
Confidence 99997 5889999 699999999999999999999 999999998732 1 000 0111111
Q ss_pred CccccccccceEEEEEeccCccccccceeeeeEE-EEEeccCCCccccceeccccccccccccchhhhhhhccccccccc
Q 009313 303 MIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIV-RTHTGADDRSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALKTNIT 381 (537)
Q Consensus 303 ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v-~t~~~sd~~~~~~v~~~~d~~G~~g~~ls~dl~~~~g~~lk~ni~ 381 (537)
...+.|+|++++||++......+ +-++...+ ......|+.. ...+ +
T Consensus 223 --~G~~~gEGa~~lvLe~~~~A~~r-g~~i~a~i~g~~~~~d~~~-----------------~~~~-----~-------- 269 (399)
T cd00832 223 --AGYVPGEGGAILVLEDAAAARER-GARVYGEIAGYAATFDPPP-----------------GSGR-----P-------- 269 (399)
T ss_pred --CCEeeeceEEEEEEeeHHHHHHC-CCeEEEEEEeEEEcCCCCC-----------------CCCC-----H--------
Confidence 35789999999999976543221 11111211 1111112110 0000 0
Q ss_pred ccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccEEEEcCCCHHHHH-----HHHHHcCCCh
Q 009313 382 TLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVHAASKTVLD-----ELQKNLELSE 456 (537)
Q Consensus 382 ~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H~~g~~vl~-----~l~~~Lgl~~ 456 (537)
+ -.....++.++. +++++ +|||++..|..|....| .+.+.+|-..
T Consensus 270 ----------~----~~~~a~~~al~~----------ag~~~------~~i~~v~~hgtgt~~~D~~E~~al~~~fg~~~ 319 (399)
T cd00832 270 ----------P----GLARAIRLALAD----------AGLTP------EDVDVVFADAAGVPELDRAEAAALAAVFGPRG 319 (399)
T ss_pred ----------H----HHHHHHHHHHHH----------cCCCH------HHccEEEeccCcCCCCCHHHHHHHHHHhCCCC
Confidence 0 011123555654 78887 99999999987765544 3555565321
Q ss_pred hhhhhhhhccccccccccchHHHHHHHH
Q 009313 457 KNMEASRMTLHRFGNTSSSSIWYELAYL 484 (537)
Q Consensus 457 e~~~~S~~~l~r~GNtsSaSi~~~La~~ 484 (537)
-.+ ..+=..+||+.+++-.++|...
T Consensus 320 ~pv---~s~K~~~Gh~~~aaG~~~l~~~ 344 (399)
T cd00832 320 VPV---TAPKTMTGRLYAGGAPLDVATA 344 (399)
T ss_pred Cce---eCCCchhcchHHHHHHHHHHHH
Confidence 112 1233457999999888888653
No 96
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=99.17 E-value=2.5e-09 Score=114.78 Aligned_cols=89 Identities=17% Similarity=0.184 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCC-----ccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHH
Q 009313 199 SMVMFGALDELFEKTKVRPKDVGILVVNCS-IFNPT-----PSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARD 272 (537)
Q Consensus 199 ~~l~~~Aa~~aL~~agi~~~dId~LI~~ss-~~~~~-----Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~ 272 (537)
.+|+.+|++++|+++|++++|||.+|++++ +++.. ++....+ ..++. ++++++++ .+|++|+.||..|..
T Consensus 27 ~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~--~~~~~-g~~~~~v~-~~Casg~~al~~Aa~ 102 (403)
T PRK06289 27 ADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATV--HPALW-GVPASRHE-AACASGSVATLAAMA 102 (403)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHH--hhcCC-CCceeecc-cccHHHHHHHHHHHH
Confidence 345699999999999999999999998754 33221 2222222 23443 46899999 799999999999999
Q ss_pred HHHcCCCCeEEEEEecccc
Q 009313 273 MLQANPNNYAVVVSTEMVG 291 (537)
Q Consensus 273 lL~~g~~~~aLVVs~E~~S 291 (537)
++++|..++|||+++|.+|
T Consensus 103 ~I~sG~~~~VLvvg~e~~s 121 (403)
T PRK06289 103 DLRAGRYDVALVVGVELMK 121 (403)
T ss_pred HHHcCCCCEEEEEEEEecC
Confidence 9999999999999999754
No 97
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.16 E-value=2.1e-08 Score=107.16 Aligned_cols=206 Identities=15% Similarity=0.079 Sum_probs=130.7
Q ss_pred ccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEecccccc--------------cCCC--
Q 009313 234 PSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYN--------------WYAG-- 297 (537)
Q Consensus 234 Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~--------------~~~~-- 297 (537)
+..+.+|+..||++ .+++.++ .+|++++.||..|.++|++|..+.|||+++|..+.. +..+
T Consensus 137 ~~~a~~ia~~lgl~--Gp~~~i~-~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~~~~~~~~~~~~l~~~~~~Pfd 213 (392)
T PRK09185 137 GSLADFLRAYLGLS--GPAYTIS-TACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLTLNGFNSLESLSPQPCRPFS 213 (392)
T ss_pred cHHHHHHHHHhCCC--CCccccc-ChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccChHHHHHHHhccccCCCccCCCc
Confidence 35788999999997 4899999 699999999999999999999999999999965431 0011
Q ss_pred CCcCCCccccccccceEEEEEeccCccccccceeeeeEEEEEeccCCCccccceeccccccccccccchhhhhhhccccc
Q 009313 298 RDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTHTGADDRSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALK 377 (537)
Q Consensus 298 ~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~t~~~sd~~~~~~v~~~~d~~G~~g~~ls~dl~~~~g~~lk 377 (537)
.+++ ..++|||++++||++.... .-++.+ .-...|... ...+ +
T Consensus 214 ~~~~----G~~~gEGaa~vVLe~~~~~----~~~I~g---~g~~~d~~~---~~~~-~---------------------- 256 (392)
T PRK09185 214 ANRD----GINIGEAAAFFLLEREDDA----AVALLG---VGESSDAHH---MSAP-H---------------------- 256 (392)
T ss_pred CCCC----ccceeceEEEEEEEEcCCC----cEEEEE---EEEeCCCCC---CCCC-C----------------------
Confidence 1233 4789999999999987321 122222 211222110 0000 0
Q ss_pred ccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccEEEEcCCCHHHHHH-----HHHHc
Q 009313 378 TNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVHAASKTVLDE-----LQKNL 452 (537)
Q Consensus 378 ~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H~~g~~vl~~-----l~~~L 452 (537)
| ..+ -.....+++++. +++++ +|||++..|..+...-|. +.+.+
T Consensus 257 -------~----~~~----~~~~a~~~Al~~----------Agl~~------~dId~v~~hgtgt~~~D~~E~~al~~~f 305 (392)
T PRK09185 257 -------P----EGL----GAILAMQQALAD----------AGLAP------ADIGYINLHGTATPLNDAMESRAVAAVF 305 (392)
T ss_pred -------C----CHH----HHHHHHHHHHHH----------cCCCH------HHccEEEeCCCCCcCCCHHHHHHHHHHh
Confidence 0 000 011224556665 88987 999999999887764443 34445
Q ss_pred CCChhhhhhhhhccccccccccchHHHHHHHHH---HcCCCC------------------------CCCEEEEEEEchHH
Q 009313 453 ELSEKNMEASRMTLHRFGNTSSSSIWYELAYLE---AKERVK------------------------RGDRVWQIAFGSGF 505 (537)
Q Consensus 453 gl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~---~~g~l~------------------------~Gd~VlliafGsG~ 505 (537)
+-.. .+. .+=..+||+.+++-.++|.... ++|.+. +-++++..+||.|-
T Consensus 306 ~~~~-pv~---s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgG 381 (392)
T PRK09185 306 GDGV-PCS---STKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPLYLVENAQALAIRYVLSNSFAFGG 381 (392)
T ss_pred CCCC-cee---CCCcccccChhhcchHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccCCCCccCCCCEEEEeCccCCc
Confidence 4211 121 2234579999999777775533 222211 13567888899887
Q ss_pred HhhheeEEE
Q 009313 506 KCNSVVWQA 514 (537)
Q Consensus 506 ~~~s~v~r~ 514 (537)
.-.+++++.
T Consensus 382 ~n~~lvl~~ 390 (392)
T PRK09185 382 NNCSLIFGR 390 (392)
T ss_pred eeEEEEEEe
Confidence 777887764
No 98
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=99.15 E-value=2.2e-09 Score=115.02 Aligned_cols=94 Identities=14% Similarity=0.135 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCccEEEEeccCC--CCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHH
Q 009313 198 ASMVMFGALDELFEK-TKVRPKDVGILVVNCSIF--NPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDML 274 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~-agi~~~dId~LI~~ss~~--~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL 274 (537)
+++|+..|++++|++ +|++|++||.+|+++... ...+..+..++...|++.+++++.|+ ++|++|+.|+..|.+.+
T Consensus 26 ~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~vP~~tV~-~aCaSG~~Ai~~A~~~I 104 (401)
T PRK09050 26 ADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVPGTTIN-RLCGSGMDAVGTAARAI 104 (401)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCCceEEEe-cccccHHHHHHHHHHHH
Confidence 456679999999996 799999999999987532 22356777899999998779999999 89999999999999999
Q ss_pred HcCCCCeEEEEEeccccc
Q 009313 275 QANPNNYAVVVSTEMVGY 292 (537)
Q Consensus 275 ~~g~~~~aLVVs~E~~S~ 292 (537)
++|..+.+|+++.|.+|.
T Consensus 105 ~sG~~dvvlagGvEsmS~ 122 (401)
T PRK09050 105 KAGEAELMIAGGVESMSR 122 (401)
T ss_pred HCCCCCEEEEeccccccc
Confidence 999999999999999875
No 99
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.14 E-value=1.2e-08 Score=110.01 Aligned_cols=317 Identities=10% Similarity=0.024 Sum_probs=181.7
Q ss_pred CceEEEEEeEEeCCCCcccCHHHHHHHHhccCC--CChhhHHHHHHHHHHcCCceeE--EccCCccccccccchhhhhhh
Q 009313 121 RSVYLVDFACYRPSDDLKVTREQFIEVAGKWSK--SDEASLDFQRRIMKSSGIGDET--YIPKVVMSAEENCMTMKHGRL 196 (537)
Q Consensus 121 ~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~--~~~~~~~f~~~i~~~sGI~~r~--~~~~~~~~~p~~~~~ma~~~~ 196 (537)
++|.|+|+|+..|- -.+.++|.+.+.. |+ +.+-.. .-..+.++..+. .++.+.. +...........
T Consensus 12 ~~VvItGig~~sp~---g~~~~~~w~~L~~-G~s~i~~~~~----~~~~~~~~~~~~~g~i~~~~d--~~~~~~~~~~~d 81 (418)
T PRK07910 12 PNVVVTGIAMTTAL---ATDAETTWKLLLD-GQSGIRTLDD----PFVEEFDLPVRIGGHLLEEFD--HQLTRVELRRMS 81 (418)
T ss_pred CCEEEEeeEEECCC---CCCHHHHHHHHHc-CCCeeEeCCh----hhhhccCCCcceEEEeccCcc--ccCCHHHHhhcc
Confidence 58999999999998 3688999988754 21 110000 001112222211 1111100 000011111123
Q ss_pred hHHHHHHHHHHHHHHhCCC---CCCCccEEEEeccCC-----------------C--------CCc-cHHHHHHHHcCCC
Q 009313 197 EASMVMFGALDELFEKTKV---RPKDVGILVVNCSIF-----------------N--------PTP-SLSAMIINHYKMR 247 (537)
Q Consensus 197 ea~~l~~~Aa~~aL~~agi---~~~dId~LI~~ss~~-----------------~--------~~P-s~a~~I~~~lGl~ 247 (537)
....++..|+.++|+++|+ +++++++++-.+... . ..| ..+..|...+|++
T Consensus 82 ~~~~~~l~aa~~AledAg~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~ 161 (418)
T PRK07910 82 YLQRMSTVLGRRVWENAGSPEVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAK 161 (418)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCCC
Confidence 5667899999999999996 455666655333110 0 112 3567788889997
Q ss_pred CCeeEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEeccc-ccc----c------CC-----------CCCcCCCcc
Q 009313 248 GNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMV-GYN----W------YA-----------GRDRSMMIP 305 (537)
Q Consensus 248 ~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~-S~~----~------~~-----------~~dr~~ll~ 305 (537)
.+++.++ .+|++++.||..|.++|+.|..+.+||.++|.. +.. + .. +-|+.. .
T Consensus 162 --G~~~ti~-taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~~--~ 236 (418)
T PRK07910 162 --AGVITPV-SACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDR--D 236 (418)
T ss_pred --CCccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCCC--C
Confidence 4788888 699999999999999999999999999999973 210 0 10 111111 3
Q ss_pred ccccccceEEEEEeccCccccccceeee-eEEEEEeccCCCccccceeccccccccccccchhhhhhhcccccccccccC
Q 009313 306 NCFFRMGCSAILMSNRRRDYHRAKYRLQ-LIVRTHTGADDRSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTLG 384 (537)
Q Consensus 306 ~~lfgDGAAAvLLs~~~~~~~~~~~~L~-~~v~t~~~sd~~~~~~v~~~~d~~G~~g~~ls~dl~~~~g~~lk~ni~~lg 384 (537)
..++|+|++++||++......+. .++. .+......+|+.. +..+ .
T Consensus 237 G~v~gEGaa~vvLe~~~~A~~rg-~~i~a~i~g~~~~~dg~~---~~~~------------------------------~ 282 (418)
T PRK07910 237 GFVFGEGGALMVIETEEHAKARG-ANILARIMGASITSDGFH---MVAP------------------------------D 282 (418)
T ss_pred CEeeeceEEEEEEeeHHHHHhCC-CcEEEEEEEEEEecCCCC---CCCC------------------------------C
Confidence 57899999999999765432211 1111 1222222233211 0000 0
Q ss_pred CCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccEEEEcCCCHHHHH-----HHHHHcCCChhhh
Q 009313 385 PLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVHAASKTVLD-----ELQKNLELSEKNM 459 (537)
Q Consensus 385 p~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H~~g~~vl~-----~l~~~Lgl~~e~~ 459 (537)
| ..+ -.....+++++. +++++ +|||++..|..+...-| .+.+-+|-..-.+
T Consensus 283 ~----~~~----~~~~a~~~Al~~----------agi~~------~did~ie~hgtgt~~~D~~E~~Al~~~fg~~~~~v 338 (418)
T PRK07910 283 P----NGE----RAGHAMTRAIEL----------AGLTP------GDIDHVNAHATGTSVGDVAEGKAINNALGGHRPAV 338 (418)
T ss_pred C----CHH----HHHHHHHHHHHH----------hCCCH------HHCCEEEcCCcCCCCCCHHHHHHHHHHhCCCCCce
Confidence 0 000 011124566665 88987 99999999988765543 4566676321112
Q ss_pred hhhhhccccccccccchHHHHHHHH---HHcCCC----------------------CC--CCEEEEEEEchHHHhhheeE
Q 009313 460 EASRMTLHRFGNTSSSSIWYELAYL---EAKERV----------------------KR--GDRVWQIAFGSGFKCNSVVW 512 (537)
Q Consensus 460 ~~S~~~l~r~GNtsSaSi~~~La~~---~~~g~l----------------------~~--Gd~VlliafGsG~~~~s~v~ 512 (537)
..+=..+||+.+++-.++|... +++|.+ ++ -.+++.-+||.|-.-.++|+
T Consensus 339 ---~s~K~~~GH~~~AaG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~l~~~~~~~~~~~~~~al~nsfGfGG~N~slvl 415 (418)
T PRK07910 339 ---YAPKSALGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEIDLDVVAGEPRPGNYRYAINNSFGFGGHNVALAF 415 (418)
T ss_pred ---eCccccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCCCCcCCCccEEEEeeecCCCeeEEEEE
Confidence 1234568999999887776432 333321 11 13566777887777667776
Q ss_pred E
Q 009313 513 Q 513 (537)
Q Consensus 513 r 513 (537)
+
T Consensus 416 ~ 416 (418)
T PRK07910 416 G 416 (418)
T ss_pred e
Confidence 5
No 100
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=99.14 E-value=4.1e-09 Score=112.96 Aligned_cols=94 Identities=11% Similarity=0.150 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccC-C-CCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHH
Q 009313 198 ASMVMFGALDELFEKTKVRPKDVGILVVNCSI-F-NPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQ 275 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~-~-~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~ 275 (537)
.++++..|++++|+++|++++|||.+|+++.. . ...+..+.+++...|++..++++.++ ++|++|+.|+..|.+.++
T Consensus 26 ~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p~~tV~-~~CaSG~~Ai~~A~~~I~ 104 (401)
T PRK08131 26 PDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQTVN-RLCASGLAAVIDAARAIT 104 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCCceeeee-chhhhHHHHHHHHHHHHH
Confidence 46778999999999999999999999998652 2 22355677799999998679999999 799999999999999999
Q ss_pred cCCCCeEEEEEeccccc
Q 009313 276 ANPNNYAVVVSTEMVGY 292 (537)
Q Consensus 276 ~g~~~~aLVVs~E~~S~ 292 (537)
+|..+.+|+++.|.+|.
T Consensus 105 sG~~dvvlagG~Esms~ 121 (401)
T PRK08131 105 CGEGDLYLAGGVESMSR 121 (401)
T ss_pred CCCCCEEEEEEecCCCC
Confidence 99999999999999875
No 101
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=99.14 E-value=3.1e-09 Score=113.85 Aligned_cols=94 Identities=10% Similarity=0.147 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCccEEEEeccC--CCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHH
Q 009313 198 ASMVMFGALDELFEK-TKVRPKDVGILVVNCSI--FNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDML 274 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~-agi~~~dId~LI~~ss~--~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL 274 (537)
+++|+..|++++|++ +|++|+|||.+|+++.. ....+..+..++..+|++.+++++.|+ ++|++|+.|+..|.+.+
T Consensus 25 ~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~-~~CaSG~~Ai~~a~~~I 103 (400)
T TIGR02430 25 ADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSVPGTTVN-RLCGSGLDAIGMAARAI 103 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEee-chhhhHHHHHHHHHHHH
Confidence 456779999999996 69999999999998653 222366778899999998679999999 89999999999999999
Q ss_pred HcCCCCeEEEEEeccccc
Q 009313 275 QANPNNYAVVVSTEMVGY 292 (537)
Q Consensus 275 ~~g~~~~aLVVs~E~~S~ 292 (537)
++|..+.+|+++.|.+|.
T Consensus 104 ~sG~~d~~la~G~E~ms~ 121 (400)
T TIGR02430 104 KAGEADLLIAGGVESMSR 121 (400)
T ss_pred HCCCCCEEEEeccccccC
Confidence 999999999999999875
No 102
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.12 E-value=3.5e-09 Score=108.45 Aligned_cols=115 Identities=17% Similarity=0.241 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCC
Q 009313 200 MVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPN 279 (537)
Q Consensus 200 ~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~ 279 (537)
+|+.+|+++||+++|++++|||.+++++......|+ ..+++.||++ .++|. .+|+++..||.+|..++++|..
T Consensus 56 ~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ips--sfvar~LGIP----~~gV~-gACSTg~eAL~lAa~~VaSG~A 128 (334)
T PRK12404 56 KLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQITPT--SFAARTLGIP----YLGLF-GACSTSMEGLALAALIVNSGGA 128 (334)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcH--HHHHHHhCCC----cccee-ecCHHHHHHHHHHHHHHHcCCC
Confidence 467999999999999999999999999877666666 4899999954 49999 5999999999999999999999
Q ss_pred CeEEEEEeccccc---ccCC----CCCcCCCccccccccceEEEEEeccCc
Q 009313 280 NYAVVVSTEMVGY---NWYA----GRDRSMMIPNCFFRMGCSAILMSNRRR 323 (537)
Q Consensus 280 ~~aLVVs~E~~S~---~~~~----~~dr~~ll~~~lfgDGAAAvLLs~~~~ 323 (537)
++||++++-.... .|.. +..|.. +...---|++|+||++...
T Consensus 129 d~VLavtsSH~~~aErqfR~P~eyG~Qrp~--taqwTvTgaga~~l~~~~~ 177 (334)
T PRK12404 129 KYVLTGASSHNAAVEKQFRYPTEYGGQKPP--TAQWTVTGAGAAILSKTGD 177 (334)
T ss_pred CEEEEEeCcccchhhhhccCcccccCcCCC--cccEEEEceEEEEEecCCC
Confidence 9999998766542 2322 234432 3444567899999997643
No 103
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=99.12 E-value=4e-09 Score=112.36 Aligned_cols=93 Identities=11% Similarity=0.195 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCC-CC-CccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHH
Q 009313 198 ASMVMFGALDELFEKTKVRPKDVGILVVNCSIF-NP-TPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQ 275 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~-~~-~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~ 275 (537)
..+++.+|++++|+++|++++|||.+|+++... .. .+..+..+.-..|++..++++.++ ++|+++..|+..|.+.|+
T Consensus 26 ~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~p~~~v~-~acaSg~~Av~~Aa~~I~ 104 (382)
T PRK07801 26 PADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEVPGVTVD-RQCGSSQQAIHFAAQAVM 104 (382)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCCceeeec-chhhhHHHHHHHHHHHHH
Confidence 345679999999999999999999999876421 11 233444444467776558899999 799999999999999999
Q ss_pred cCCCCeEEEEEecccc
Q 009313 276 ANPNNYAVVVSTEMVG 291 (537)
Q Consensus 276 ~g~~~~aLVVs~E~~S 291 (537)
+|..+.+||++.|.+|
T Consensus 105 sG~~d~vLv~G~e~ms 120 (382)
T PRK07801 105 SGTQDLVVAGGVQNMS 120 (382)
T ss_pred CCCCCEEEEcchhhhc
Confidence 9999999999998553
No 104
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=99.11 E-value=8e-09 Score=110.30 Aligned_cols=94 Identities=9% Similarity=0.119 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCccEEEEeccCC-CC-CccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHH
Q 009313 198 ASMVMFGALDELFEK-TKVRPKDVGILVVNCSIF-NP-TPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDML 274 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~-agi~~~dId~LI~~ss~~-~~-~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL 274 (537)
+++++..+++++|++ +|++++|||.+|+++... .. .+..+..+....|++.+++++.|+ ++|++|+.|+.+|...+
T Consensus 27 ~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~~p~~~V~-~~caSG~~Ai~~A~~~I 105 (387)
T PRK08947 27 AEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHSVPAVTVN-RLCGSSMQALHDAARAI 105 (387)
T ss_pred HHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCCCcceeee-chhHHHHHHHHHHHHHH
Confidence 456679999999997 799999999999987642 22 244566788899998669999999 79999999999999999
Q ss_pred HcCCCCeEEEEEeccccc
Q 009313 275 QANPNNYAVVVSTEMVGY 292 (537)
Q Consensus 275 ~~g~~~~aLVVs~E~~S~ 292 (537)
++|..+.+||++.|.+|.
T Consensus 106 ~sG~~d~vlv~G~E~ms~ 123 (387)
T PRK08947 106 MTGDGDVFLIGGVEHMGH 123 (387)
T ss_pred HCCCCCEEEEcccccccc
Confidence 999999999999998763
No 105
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=99.10 E-value=5e-09 Score=113.24 Aligned_cols=94 Identities=14% Similarity=0.180 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCC-CCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHc
Q 009313 198 ASMVMFGALDELFEKTKVRPKDVGILVVNCSIF-NPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQA 276 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~-~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~ 276 (537)
..+|+..|++++|+++|+++++||.+|+++... ...+.++..++-..|++..++++.|+ ++|++|+.|+.+|.+.+++
T Consensus 31 ~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~p~~~V~-~~CaSG~~A~~~a~~~I~s 109 (430)
T TIGR02446 31 AVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVT-RACATSFQSAVNVAESIMA 109 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCCchhhhh-hhhhHHHHHHHHHHHHHHC
Confidence 456779999999999999999999999987532 22345677777778998679999999 8999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 009313 277 NPNNYAVVVSTEMVGY 292 (537)
Q Consensus 277 g~~~~aLVVs~E~~S~ 292 (537)
|..+.+|+++.|.+|.
T Consensus 110 G~~dvvla~G~E~mS~ 125 (430)
T TIGR02446 110 GAIDIGIAGGADSSSV 125 (430)
T ss_pred CCCCEEEEeeeEcccC
Confidence 9999999999999874
No 106
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=99.09 E-value=7.2e-09 Score=110.70 Aligned_cols=93 Identities=14% Similarity=0.219 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHc
Q 009313 198 ASMVMFGALDELFEKTKVRPKDVGILVVNCSI-FNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQA 276 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~-~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~ 276 (537)
+.+|+.+|++++|+++|++++|||.+|+++.. ....+..+.+++..+|++.+++.+.++ ++|++++.|+..|...+++
T Consensus 26 ~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~-~~caSg~~av~~Aa~~I~s 104 (388)
T PRK06366 26 APQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVN-VVCASGMLAVESAAREIML 104 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcceeee-chhhHHHHHHHHHHHHHhc
Confidence 45667999999999999999999999987652 111234567799999997568999999 7999999999999999999
Q ss_pred CCCCeEEEEEecccc
Q 009313 277 NPNNYAVVVSTEMVG 291 (537)
Q Consensus 277 g~~~~aLVVs~E~~S 291 (537)
|..+.+||++.|.+|
T Consensus 105 G~~d~vla~G~e~ms 119 (388)
T PRK06366 105 GERDLVIAGGMENMS 119 (388)
T ss_pred CCCCEEEEEeeEccc
Confidence 999999998889866
No 107
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=99.06 E-value=1.1e-08 Score=110.26 Aligned_cols=256 Identities=13% Similarity=0.098 Sum_probs=153.4
Q ss_pred hhHHHHHHHHHHHHHHhCCCC-CCCccE----EEEeccCCC------------------C--------Cc-cHHHHHHHH
Q 009313 196 LEASMVMFGALDELFEKTKVR-PKDVGI----LVVNCSIFN------------------P--------TP-SLSAMIINH 243 (537)
Q Consensus 196 ~ea~~l~~~Aa~~aL~~agi~-~~dId~----LI~~ss~~~------------------~--------~P-s~a~~I~~~ 243 (537)
....+++..|++++|+++|++ +++++. ++++++... . .+ ..+.+|...
T Consensus 75 ~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~ 154 (421)
T PTZ00050 75 SRATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIK 154 (421)
T ss_pred CHHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHH
Confidence 345678899999999999998 655542 333332100 0 11 247789999
Q ss_pred cCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEecccccc---------------c-------CCCCCcC
Q 009313 244 YKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYN---------------W-------YAGRDRS 301 (537)
Q Consensus 244 lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~---------------~-------~~~~dr~ 301 (537)
+|++ -+++.++ .+|++++.||..|.++|++|..+.+||+++|..... + ..+-|++
T Consensus 155 ~~l~--Gp~~ti~-~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~ 231 (421)
T PTZ00050 155 HKLK--GPSGSAV-TACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKD 231 (421)
T ss_pred hCCC--Ccccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCC
Confidence 9997 5889999 699999999999999999999999999999973210 0 0011111
Q ss_pred CCccccccccceEEEEEeccCccccccceeeeeEE-EEEeccCCCccccceeccccccccccccchhhhhhhcccccccc
Q 009313 302 MMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIV-RTHTGADDRSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALKTNI 380 (537)
Q Consensus 302 ~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v-~t~~~sd~~~~~~v~~~~d~~G~~g~~ls~dl~~~~g~~lk~ni 380 (537)
. ...+.||||+|+||.+......+. -++...+ ......|+.. +..+ .
T Consensus 232 ~--~G~~~gEGAaalvLe~~~~A~~~g-~~i~a~i~g~~~~~d~~~---~~~p----------------~---------- 279 (421)
T PTZ00050 232 R--AGFVMGEGAGILVLEELEHALRRG-AKIYAEIRGYGSSSDAHH---ITAP----------------H---------- 279 (421)
T ss_pred C--CCEeeccceEEEEEeeHHHHHHCC-CeEEEEEEEEEEcCCCCC---CCCC----------------C----------
Confidence 1 356789999999999765422111 1111111 1111122100 0000 0
Q ss_pred cccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccEEEEcCCCHHHHH-----HHHHHcCCC
Q 009313 381 TTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVHAASKTVLD-----ELQKNLELS 455 (537)
Q Consensus 381 ~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H~~g~~vl~-----~l~~~Lgl~ 455 (537)
| ..+ ......+++++.+ +|+++ +|||++.+|..+...-| .+.+.++-.
T Consensus 280 ----~----~~~----~~~~ai~~Al~~~---------Agi~~------~dId~ie~hgtgt~~~D~~E~~al~~~~~~~ 332 (421)
T PTZ00050 280 ----P----DGR----GARRCMENALKDG---------ANINI------NDVDYVNAHATSTPIGDKIELKAIKKVFGDS 332 (421)
T ss_pred ----C----ChH----HHHHHHHHHHHhc---------cCCCh------hhCCEEECCCccCCCCCHHHHHHHHHHhccc
Confidence 0 000 0111235555530 57887 99999999988774443 344555532
Q ss_pred h-hhhhhhhhccccccccccchHHHHHHHH---HHcCCCC--------------------------CCCEEEEEEEchHH
Q 009313 456 E-KNMEASRMTLHRFGNTSSSSIWYELAYL---EAKERVK--------------------------RGDRVWQIAFGSGF 505 (537)
Q Consensus 456 ~-e~~~~S~~~l~r~GNtsSaSi~~~La~~---~~~g~l~--------------------------~Gd~VlliafGsG~ 505 (537)
. +.+.- -.+=..+||+.+++-.++|... +++|.+. +=.+++..+||.|-
T Consensus 333 ~~~~~~v-~s~K~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~nsfgfgG 411 (421)
T PTZ00050 333 GAPKLYV-SSTKGGLGHLLGAAGAVESIVTILSLYEQIIPPTINLENPDAECDLNLVQGKTAHPLQSIDAVLSTSFGFGG 411 (421)
T ss_pred cCCCceE-ECccccccccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCccccCCcccCcCCCCCEEEEeeecCCC
Confidence 1 22210 1223368999999888777653 3333321 11567888899887
Q ss_pred HhhheeEEE
Q 009313 506 KCNSVVWQA 514 (537)
Q Consensus 506 ~~~s~v~r~ 514 (537)
.-.++|++.
T Consensus 412 ~n~~lvl~~ 420 (421)
T PTZ00050 412 VNTALLFTK 420 (421)
T ss_pred eeEEEEEeC
Confidence 777888763
No 108
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=99.05 E-value=2.1e-08 Score=107.07 Aligned_cols=95 Identities=13% Similarity=0.132 Sum_probs=80.3
Q ss_pred hHHHHHHHHHHHHHHh-CCCCCCCccEEEEeccCC-CC-CccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHH
Q 009313 197 EASMVMFGALDELFEK-TKVRPKDVGILVVNCSIF-NP-TPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDM 273 (537)
Q Consensus 197 ea~~l~~~Aa~~aL~~-agi~~~dId~LI~~ss~~-~~-~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~l 273 (537)
.+.+|+..|++++|++ +|++|++||.+|+++... .. .+..+.++....|++..++++.|+ ++|++|+.|+.+|.+.
T Consensus 24 ~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~p~~tV~-~~CaSG~~Ai~~Aa~~ 102 (385)
T TIGR02445 24 RAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTSAAVTVN-RLCGSSMQALHDAARA 102 (385)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCcchhhhh-hhhHHHHHHHHHHHHH
Confidence 3457789999999997 599999999999987632 11 234666667688998779999999 7999999999999999
Q ss_pred HHcCCCCeEEEEEeccccc
Q 009313 274 LQANPNNYAVVVSTEMVGY 292 (537)
Q Consensus 274 L~~g~~~~aLVVs~E~~S~ 292 (537)
+++|..+.+|+++.|.+|.
T Consensus 103 I~sG~~d~vlagG~E~ms~ 121 (385)
T TIGR02445 103 IMTGDADVCLVGGVEHMGH 121 (385)
T ss_pred HHCCCCCEEEEeeehhccc
Confidence 9999999999999998763
No 109
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=99.04 E-value=2.5e-08 Score=106.93 Aligned_cols=92 Identities=15% Similarity=0.137 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCC-CCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHc
Q 009313 198 ASMVMFGALDELFEKTKVRPKDVGILVVNCSIF-NPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQA 276 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~-~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~ 276 (537)
..+++.+|++++|+++|++++|||.+++++... +........+...+|++ .++++.+. ++|++++.+|..|...|++
T Consensus 27 ~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~-~~~~~~v~-~~c~sg~~ai~~A~~~I~s 104 (398)
T PRK06157 27 AEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLP-NIPVTRVE-NFCATGSEAFRGAVYAVAS 104 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCC-CCCEEEEe-cccHHHHHHHHHHHHHHHC
Confidence 356679999999999999999999999876432 11122235688899997 48999999 7999999999999999999
Q ss_pred CCCCeEEEEEecccc
Q 009313 277 NPNNYAVVVSTEMVG 291 (537)
Q Consensus 277 g~~~~aLVVs~E~~S 291 (537)
|..+.+||++.|.+|
T Consensus 105 G~~d~vlv~G~e~~s 119 (398)
T PRK06157 105 GAYDIALALGVEKLK 119 (398)
T ss_pred CCCCEEEEEEEeecc
Confidence 999999999999754
No 110
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=99.04 E-value=2e-08 Score=108.59 Aligned_cols=92 Identities=12% Similarity=0.042 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCC-CccHH-HHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHH
Q 009313 198 ASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNP-TPSLS-AMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQ 275 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~-~Ps~a-~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~ 275 (537)
.++++.+|+++||+++|++++|||.+|+++..... ....+ ..++..+|+++ .+++.+. ++|+++..||..|...|+
T Consensus 37 ~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~~-~~~~~v~-~~~aSg~~ai~~A~~~I~ 114 (430)
T PRK06365 37 FRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLVP-KPSKRIE-GGGATGGLAFQAGYEEIA 114 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCCC-CceEEEe-CCcHHHHHHHHHHHHHHH
Confidence 35778999999999999999999998877643211 22333 34679999984 8999999 799999999999999999
Q ss_pred cCCCCeEEEEEecccc
Q 009313 276 ANPNNYAVVVSTEMVG 291 (537)
Q Consensus 276 ~g~~~~aLVVs~E~~S 291 (537)
+|..+.|||+++|..|
T Consensus 115 sG~~~~vLv~G~e~~s 130 (430)
T PRK06365 115 SGRMDCVAVYGFETMS 130 (430)
T ss_pred cCCCCEEEEEEeeecc
Confidence 9999999999999754
No 111
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.03 E-value=3.3e-08 Score=106.23 Aligned_cols=188 Identities=9% Similarity=0.133 Sum_probs=115.5
Q ss_pred CceEEEEEeEEeCCCCcccCHHHHHHHHhccCC--CChhhHHHHHHHHHHcCCceeEEccCCccccccccchhhhhhhhH
Q 009313 121 RSVYLVDFACYRPSDDLKVTREQFIEVAGKWSK--SDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEA 198 (537)
Q Consensus 121 ~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~~--~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~p~~~~~ma~~~~ea 198 (537)
++|.|.|+|+..|-. .+.+++++.+.. |. +.+- .+ ++..+...+........................
T Consensus 2 ~rVvITG~G~vsp~G---~~~~~~w~~l~~-G~sgi~~~-----~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~r~ 71 (406)
T PRK07967 2 RRVVITGLGIVSSIG---NNQQEVLASLRE-GRSGITFS-----PE-FAEMGMRSQVWGNVKLDPTGLIDRKVMRFMGDA 71 (406)
T ss_pred CcEEEEcceEECCCC---CCHHHHHHHHHc-CCCceeEC-----Cc-ccccCCCCceEEEcCCChhhcCCHHHhhcCCHH
Confidence 579999999999973 788888887643 11 0000 00 111222222111100000000001111112345
Q ss_pred HHHHHHHHHHHHHhCCCCCC-----CccEEEEeccCC------------------C--------CCc-cHHHHHHHHcCC
Q 009313 199 SMVMFGALDELFEKTKVRPK-----DVGILVVNCSIF------------------N--------PTP-SLSAMIINHYKM 246 (537)
Q Consensus 199 ~~l~~~Aa~~aL~~agi~~~-----dId~LI~~ss~~------------------~--------~~P-s~a~~I~~~lGl 246 (537)
.+++..|++++|+++|++++ .+++++-.+... . ..| ..+.+|+..||+
T Consensus 72 ~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l 151 (406)
T PRK07967 72 SAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKI 151 (406)
T ss_pred HHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHCC
Confidence 67889999999999998754 344444322100 0 112 367889999999
Q ss_pred CCCeeEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEecccccccC---------------------CCCCcCCCcc
Q 009313 247 RGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYNWY---------------------AGRDRSMMIP 305 (537)
Q Consensus 247 ~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~~~---------------------~~~dr~~ll~ 305 (537)
+ -+++.++ .+|++++.||..|.++|+.|..+.+||.++|..+..+. ++-|+.. .
T Consensus 152 ~--Gp~~tvs-~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r--~ 226 (406)
T PRK07967 152 K--GVNYSIS-SACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDANR--D 226 (406)
T ss_pred C--CCccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCC--C
Confidence 8 4888999 79999999999999999999999999999987543100 1111111 2
Q ss_pred ccccccceEEEEEeccCc
Q 009313 306 NCFFRMGCSAILMSNRRR 323 (537)
Q Consensus 306 ~~lfgDGAAAvLLs~~~~ 323 (537)
..+.|+||+++||++.+.
T Consensus 227 G~v~gEGaa~lvLe~~~~ 244 (406)
T PRK07967 227 GFVIAGGGGVVVVEELEH 244 (406)
T ss_pred ceeeeceEEEEEEeeHHH
Confidence 468899999999997543
No 112
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.02 E-value=8.8e-08 Score=102.64 Aligned_cols=276 Identities=14% Similarity=0.034 Sum_probs=164.0
Q ss_pred CCceEEEEEeEEeCCCCcccCHHHHHHHHhcc--C-CCChhhHHHHHHHHHHcCC-ceeEEccCCccccccccchhhhhh
Q 009313 120 PRSVYLVDFACYRPSDDLKVTREQFIEVAGKW--S-KSDEASLDFQRRIMKSSGI-GDETYIPKVVMSAEENCMTMKHGR 195 (537)
Q Consensus 120 ~~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~--~-~~~~~~~~f~~~i~~~sGI-~~r~~~~~~~~~~p~~~~~ma~~~ 195 (537)
+++|.|.|+|+-.|- -.+.+++.+.+..- + .++... | .. ..++. ++-. ++ . ..+ ........
T Consensus 5 ~~rVvITGiG~vsp~---G~~~e~~w~aL~~G~sg~~~~~~~--~--~~-~~~~~~~~~~--~~-~-~~~--~~~~~r~~ 70 (398)
T PRK06519 5 PNDVVITGIGLVSSL---GEGLDAHWNALSAGRPQPNVDTET--F--AP-YPVHPLPEID--WS-Q-QIP--KRGDQRQM 70 (398)
T ss_pred CCCEEEEcceEECCC---CCCHHHHHHHHHcCCCCCCCCccc--c--cC-cCcccccccC--hh-h-cCC--chhhhhcc
Confidence 568999999999997 37889999887431 1 111100 0 00 00000 0000 00 0 000 00001112
Q ss_pred hhHHHHHHHHHHHHHHhCCCCC-----CCccEEEEeccCCC-------------------------------------CC
Q 009313 196 LEASMVMFGALDELFEKTKVRP-----KDVGILVVNCSIFN-------------------------------------PT 233 (537)
Q Consensus 196 ~ea~~l~~~Aa~~aL~~agi~~-----~dId~LI~~ss~~~-------------------------------------~~ 233 (537)
+....++..|++++|+++|+++ +++++++-++.... ..
T Consensus 71 ~r~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 150 (398)
T PRK06519 71 ETWQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQL 150 (398)
T ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhh
Confidence 3466788999999999999854 34555554332110 01
Q ss_pred c-cHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEecc-ccc---------ccCC------
Q 009313 234 P-SLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEM-VGY---------NWYA------ 296 (537)
Q Consensus 234 P-s~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~-~S~---------~~~~------ 296 (537)
| ..+..|+..+|++ -+++.++ .+|++++.||..|.++|++|..+.+||.++|. ++. ....
T Consensus 151 ~n~~a~~is~~~gl~--Gp~~ti~-~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~~~~p 227 (398)
T PRK06519 151 SNLLAGNISIVHKVT--GSSRTFM-GEESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKGGWAP 227 (398)
T ss_pred hhHHHHHHHHHhCCC--Ccccccc-CCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCCCCCc
Confidence 2 2577899999998 4899999 69999999999999999999999999999986 222 0110
Q ss_pred CC-----CcCCCccccccccceEEEEEeccCccccc-c-ce-eeeeEEEEEeccCCCccccceeccccccccccccchhh
Q 009313 297 GR-----DRSMMIPNCFFRMGCSAILMSNRRRDYHR-A-KY-RLQLIVRTHTGADDRSFRSVYQEEDEQGFRGLKVSKNI 368 (537)
Q Consensus 297 ~~-----dr~~ll~~~lfgDGAAAvLLs~~~~~~~~-~-~~-~L~~~v~t~~~sd~~~~~~v~~~~d~~G~~g~~ls~dl 368 (537)
.. +|+ ..+.|+||+++||++.+....| + .| ++.++ ..|.. + + +.
T Consensus 228 ~~d~~~~~r~----G~v~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~-----~~d~~-------~-~---------~~-- 279 (398)
T PRK06519 228 VWSRGGEDGG----GFILGSGGAFLVLESREHAEARGARPYARISGV-----ESDRA-------R-R---------AP-- 279 (398)
T ss_pred hhccCccCCC----CeeeeceEEEEEEeeHHHHHhCCCceEEEEEEE-----eecCC-------C-C---------Ch--
Confidence 01 233 5788999999999986543211 1 12 22221 11100 0 0 00
Q ss_pred hhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccEEEEcCCCHHHHH--
Q 009313 369 MEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVHAASKTVLD-- 446 (537)
Q Consensus 369 ~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H~~g~~vl~-- 446 (537)
+ -....+++.++. +|+ + +|||+++.|..|...-|
T Consensus 280 -----------------------~----~~~~am~~AL~~----------Agl-~------~~IdyI~ahgtgT~~~D~~ 315 (398)
T PRK06519 280 -----------------------G----DLEASLERLLKP----------AGG-L------AAPTAVISGATGAHPATAE 315 (398)
T ss_pred -----------------------H----HHHHHHHHHHHH----------CCC-c------ccCCEEEeCCCCCCCccHH
Confidence 0 001123555554 788 6 89999999988766544
Q ss_pred ---HHHHHcCCChhhhhhhhhccccccccccchHHHHHHH---HHHcCCC
Q 009313 447 ---ELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAY---LEAKERV 490 (537)
Q Consensus 447 ---~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~---~~~~g~l 490 (537)
.+.+.++.+ + ..+=..+|||.+++-.+++.. .+++|.+
T Consensus 316 E~~Ai~~~f~~p---v---sS~Ks~~GH~l~AAGa~e~i~~~lal~~g~v 359 (398)
T PRK06519 316 EKAALEAALAGP---V---RGIGTLFGHTMEAQFPLGLALAALSVSKGAL 359 (398)
T ss_pred HHHHHHHHcCCC---c---cccchhhccchHHHHHHHHHHHHHHHhcCcc
Confidence 455667754 2 234446899999988888865 3345543
No 113
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=99.01 E-value=4.9e-08 Score=107.44 Aligned_cols=91 Identities=11% Similarity=-0.002 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHHhCCCC--CCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHH
Q 009313 198 ASMVMFGALDELFEKTKVR--PKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQ 275 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~--~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~ 275 (537)
..+++.+|+++||+++|++ ++|||.+++++............++.++|+.+ ....... .||+++..++..|...|+
T Consensus 27 ~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~~~~la~~lGl~p-~~~~~~~-~GG~s~~~~v~~Aa~~Ia 104 (498)
T PRK08257 27 PVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDPPGLLAERLGADP-ARTVYSP-VGGNSPQRLVNEAALRIA 104 (498)
T ss_pred HHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCHHHHHHHHcCCCC-cceeEec-CCCHHHHHHHHHHHHHHH
Confidence 3566799999999999999 99999998764321122234578999999974 4555555 699999999999999999
Q ss_pred cCCCCeEEEEEeccc
Q 009313 276 ANPNNYAVVVSTEMV 290 (537)
Q Consensus 276 ~g~~~~aLVVs~E~~ 290 (537)
+|..+.|||+++|.+
T Consensus 105 sG~advVLv~G~E~~ 119 (498)
T PRK08257 105 AGEADVALVAGAEAQ 119 (498)
T ss_pred CCCCCEEEEeeeeec
Confidence 999999999999974
No 114
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=98.97 E-value=3.1e-08 Score=104.09 Aligned_cols=252 Identities=14% Similarity=0.056 Sum_probs=153.2
Q ss_pred HHHHHHHHHHHHHHhCCC--CCCCccEEEEeccCC-----------------CC--------Cc-cHHHHHHHHcCCCCC
Q 009313 198 ASMVMFGALDELFEKTKV--RPKDVGILVVNCSIF-----------------NP--------TP-SLSAMIINHYKMRGN 249 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi--~~~dId~LI~~ss~~-----------------~~--------~P-s~a~~I~~~lGl~~~ 249 (537)
..+++..|++++++++|+ +++++++++-++... .. .| ..+.+|...+|++
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~-- 81 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFK-- 81 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCC--
Confidence 456778999999999995 667787776443110 00 11 3578899999998
Q ss_pred eeEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEecccccc-----c----------C-------CCCCcCCCcccc
Q 009313 250 IISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYN-----W----------Y-------AGRDRSMMIPNC 307 (537)
Q Consensus 250 ~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~-----~----------~-------~~~dr~~ll~~~ 307 (537)
-+++.++ .+|++++.||..|.++|+.|..+.+||.++|..... | . .+-|+.. ...
T Consensus 82 Gp~~ti~-~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r--~G~ 158 (342)
T PRK14691 82 GPIGAPV-TACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTAR--DGF 158 (342)
T ss_pred CCccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCC--CCc
Confidence 5899999 699999999999999999999999999999873210 0 0 0112111 257
Q ss_pred ccccceEEEEEeccCccccccceee-eeEEEEEeccCCCccccceeccccccccccccchhhhhhhcccccccccccCCC
Q 009313 308 FFRMGCSAILMSNRRRDYHRAKYRL-QLIVRTHTGADDRSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTLGPL 386 (537)
Q Consensus 308 lfgDGAAAvLLs~~~~~~~~~~~~L-~~~v~t~~~sd~~~~~~v~~~~d~~G~~g~~ls~dl~~~~g~~lk~ni~~lgp~ 386 (537)
++||||+++||++......+. .+. ..+......+|+... ..+ .
T Consensus 159 v~gEGAa~lvLes~~~A~~rG-~~i~a~I~g~~~~~d~~~~---~~p-----------~--------------------- 202 (342)
T PRK14691 159 VMGEGAGLLIIEELEHALARG-AKPLAEIVGYGTSADAYHM---TSG-----------A--------------------- 202 (342)
T ss_pred cccceEEEEEEeeHHHHHhCC-CCceEEEEEEEEEcCCCCC---CCC-----------C---------------------
Confidence 899999999999765432111 111 112212122221100 000 0
Q ss_pred ccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccEEEEcCCCHHHHHH-----HHHHcCCChhhhhh
Q 009313 387 VLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVHAASKTVLDE-----LQKNLELSEKNMEA 461 (537)
Q Consensus 387 vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H~~g~~vl~~-----l~~~Lgl~~e~~~~ 461 (537)
|..+ -.....++++++ +|+++ +|||++..|-.+...-|. +.+.+|-. ..+.-
T Consensus 203 --p~~~----~~~~ai~~AL~~----------Agl~p------~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~~-~~~~v 259 (342)
T PRK14691 203 --EDGD----GAYRAMKIALRQ----------AGITP------EQVQHLNAHATSTPVGDLGEINAIKHLFGES-NALAI 259 (342)
T ss_pred --CCHH----HHHHHHHHHHHH----------cCCCH------HHCCEEEecCCCCcCCCHHHHHHHHHHhCCC-CCceE
Confidence 0000 011224666765 89987 999999999877766544 45556531 11211
Q ss_pred hhhccccccccccchHHHHHHH---HHHcCCC-------------------------CCCCEEEEEEEchHHHhhheeEE
Q 009313 462 SRMTLHRFGNTSSSSIWYELAY---LEAKERV-------------------------KRGDRVWQIAFGSGFKCNSVVWQ 513 (537)
Q Consensus 462 S~~~l~r~GNtsSaSi~~~La~---~~~~g~l-------------------------~~Gd~VlliafGsG~~~~s~v~r 513 (537)
-.+=..+||+.+++-.+++.. .+++|.+ .+-+.++..+||-|-...++|++
T Consensus 260 -~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ippt~n~~~~d~~~~~~~~v~~~~~~~~~~~al~nsfgfGG~n~~lvl~ 338 (342)
T PRK14691 260 -TSTKSATGHLLGAAGGLETIFTVLALRDQIVPATLNLENPDPAAKGLNIIAGNAQPHDMTYALSNGFGFAGVNASILLK 338 (342)
T ss_pred -ECCcccccCCcchhhHHHHHHHHHHHhCCccCCcCCCCCCCccccccCcccCCCccCCCCEEEEeCccCCCeeEEEEEe
Confidence 123346899877665444433 2223221 01245778889988888888886
Q ss_pred E
Q 009313 514 A 514 (537)
Q Consensus 514 ~ 514 (537)
.
T Consensus 339 ~ 339 (342)
T PRK14691 339 R 339 (342)
T ss_pred e
Confidence 4
No 115
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=98.90 E-value=1.6e-07 Score=100.32 Aligned_cols=87 Identities=10% Similarity=-0.003 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCC
Q 009313 199 SMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANP 278 (537)
Q Consensus 199 ~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~ 278 (537)
.+++.+|+++||+++|++++|||.++.++.. .+.....++..+|++ ..+...+. .||+++..++..|...|++|.
T Consensus 26 ~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~---~~~~~~~~~~~lGl~-~~~~~~v~-~gg~s~~~a~~~A~~~I~sG~ 100 (388)
T PRK08142 26 AQLHAEVAKGALADAGLSLADVDGYFCAGDA---PGLGPASMVDYLGLK-LRHVDSTE-TGGSSYLAHVGHAAQAIAAGK 100 (388)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC---CCccHHHHHHhCCCC-Ceeecccc-CCcHHHHHHHHHHHHHHHcCC
Confidence 4567999999999999999999998753211 111124589999997 47888888 799999999999999999999
Q ss_pred CCeEEEEEeccc
Q 009313 279 NNYAVVVSTEMV 290 (537)
Q Consensus 279 ~~~aLVVs~E~~ 290 (537)
.+.||||+.|..
T Consensus 101 ~d~vLvvg~e~~ 112 (388)
T PRK08142 101 CSVALITLAGRP 112 (388)
T ss_pred CCEEEEEeeeec
Confidence 999999998864
No 116
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=98.89 E-value=6.7e-09 Score=112.23 Aligned_cols=94 Identities=13% Similarity=0.274 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHc
Q 009313 198 ASMVMFGALDELFEKTKVRPKDVGILVVNCSI-FNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQA 276 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~-~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~ 276 (537)
..+|+.+|++++|+++|++++|||.+|++|.. ....+..+..++..+|++.++++++++ ++|++++.++..|.++|++
T Consensus 27 ~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~-~~CaSg~~al~~A~~~I~s 105 (426)
T PRK08170 27 ASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVPAWTVQ-RNCASGMQALDSAAANIAL 105 (426)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCceeeecc-chhhHHHHHHHHHHHHHHC
Confidence 35667999999999999999999999987653 223467778899999997568999999 7999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 009313 277 NPNNYAVVVSTEMVGY 292 (537)
Q Consensus 277 g~~~~aLVVs~E~~S~ 292 (537)
|..+++||+++|.+|.
T Consensus 106 G~~d~vLv~G~E~ms~ 121 (426)
T PRK08170 106 GRADLVLAGGVEAMSH 121 (426)
T ss_pred CCCCEEEEEEEecccC
Confidence 9999999999998775
No 117
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.87 E-value=2e-07 Score=118.22 Aligned_cols=326 Identities=12% Similarity=0.124 Sum_probs=186.9
Q ss_pred CCceEEEEEeEEeCCCCcccCHHHHHHHHhccC----CCChhhHHHHHHHHH-------HcCCceeEEccCC-----ccc
Q 009313 120 PRSVYLVDFACYRPSDDLKVTREQFIEVAGKWS----KSDEASLDFQRRIMK-------SSGIGDETYIPKV-----VMS 183 (537)
Q Consensus 120 ~~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~----~~~~~~~~f~~~i~~-------~sGI~~r~~~~~~-----~~~ 183 (537)
..+|-|+|+||-.|.. .+.++|++.+..-. .++++..+- ...+. ++-.+.-.++++- .+.
T Consensus 6 ~~~IAIvGmg~~~P~a---~~~~~fW~~L~~G~~~i~~ip~~rw~~-~~~~~~~~~~~~~~~~~~ggfl~~v~FD~~~F~ 81 (2582)
T TIGR02813 6 DMPIAIVGMASIFANS---RYLNKFWDLIFEKIDAITDVPSDHWAK-DDYYDSDKSEADKSYCKRGGFLPEVDFNPMEFG 81 (2582)
T ss_pred CCCEEEEeeeeeCCCC---CCHHHHHHHHHcCCCccCCCChhhCCh-hhccCccccccCCcccceeEecCccCCCHhhcC
Confidence 4679999999999983 57899998875311 011110000 00000 0000000122211 111
Q ss_pred cccccchhhhhhhhHHHHHHHHHHHHHHhCCCC----CCCccEEEEeccCC-----------------------------
Q 009313 184 AEENCMTMKHGRLEASMVMFGALDELFEKTKVR----PKDVGILVVNCSIF----------------------------- 230 (537)
Q Consensus 184 ~p~~~~~ma~~~~ea~~l~~~Aa~~aL~~agi~----~~dId~LI~~ss~~----------------------------- 230 (537)
+| +.-++.-+....++..++.++|+++|+. .+.+++++-++...
T Consensus 82 i~---p~ea~~mDpqqrl~L~~a~eALedAG~~~~~~~~r~GV~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (2582)
T TIGR02813 82 LP---PNILELTDISQLLSLVVAKEVLNDAGLPDGYDRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVEDEDS 158 (2582)
T ss_pred CC---HHHHHhcCHHHHHHHHHHHHHHHhCCCCCCCCCCCEEEEEEECCCcccchhhhhhhcchhhhhhhhccccchhhH
Confidence 11 1112233456678999999999999984 34566555332110
Q ss_pred ----------------CCCc-----cHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEecc
Q 009313 231 ----------------NPTP-----SLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEM 289 (537)
Q Consensus 231 ----------------~~~P-----s~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~ 289 (537)
+..| .++.+|+++||++ -+++.|+ .+|++++.||++|.+.|++|..+.+||.+++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~g~~~n~~A~RIS~~f~L~--Gps~tVd-tACsSSL~Al~~A~~~L~~G~~D~alvGGv~~ 235 (2582)
T TIGR02813 159 EMLIKKFQDQYIHWEENSFPGSLGNVISGRIANRFDLG--GMNCVVD-AACAGSLAAIRMALSELLEGRSEMMITGGVCT 235 (2582)
T ss_pred HHhhhhhcccccccCccccccccccHHHHHHHHHhCCC--CCccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEeccee
Confidence 0011 2488999999998 4899999 79999999999999999999999999999876
Q ss_pred c-cccc---------CC------CCCcCCCccccccccceEEEEEeccCccccccceeeeeEEEE-EeccCCCcccccee
Q 009313 290 V-GYNW---------YA------GRDRSMMIPNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRT-HTGADDRSFRSVYQ 352 (537)
Q Consensus 290 ~-S~~~---------~~------~~dr~~ll~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~t-~~~sd~~~~~~v~~ 352 (537)
. +... +. .-|.+. ..+++|+|++++||.+-....++ +-++..+++. ...+|++. ..++.
T Consensus 236 ~~~p~~~~~fs~~~~lS~~g~crpFD~~a--dG~v~GEGag~vvLkrL~dA~~d-Gd~IyAvI~G~g~~~DG~~-~~ita 311 (2582)
T TIGR02813 236 DNSPFMYMSFSKTPAFTTNEDIQPFDIDS--KGMMIGEGIGMMALKRLEDAERD-GDRIYAVIKGVGASSDGKF-KSIYA 311 (2582)
T ss_pred eCCHHHHHHHHhccCcCCCCCccCCCCCC--CcccccceEEEEEeCcHHHHHhC-CCcEEEEEEEEEEcCCCCC-CCCcC
Confidence 3 2110 00 111111 25789999999999975432111 1122222222 22222221 11110
Q ss_pred ccccccccccccchhhhhhhcccccccccccCCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccc
Q 009313 353 EEDEQGFRGLKVSKNIMEIGGDALKTNITTLGPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAF 432 (537)
Q Consensus 353 ~~d~~G~~g~~ls~dl~~~~g~~lk~ni~~lgp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~di 432 (537)
+ ...+ | ....++.++. +|+++ ++|
T Consensus 312 P----------------~~~g-------------------q-----~~~i~~Al~~----------Agi~p------~~I 335 (2582)
T TIGR02813 312 P----------------RPEG-------------------Q-----AKALKRAYDD----------AGFAP------HTC 335 (2582)
T ss_pred C----------------CHHH-------------------H-----HHHHHHHHHH----------cCCCH------HHC
Confidence 0 0000 1 1123555554 89998 999
Q ss_pred cEEEEcCCCHHHHH-----HHHHHcCCCh---hhhhhhhhccccccccccchHHHHHHHH---HHcCCCC----------
Q 009313 433 EHFCVHAASKTVLD-----ELQKNLELSE---KNMEASRMTLHRFGNTSSSSIWYELAYL---EAKERVK---------- 491 (537)
Q Consensus 433 d~~~~H~~g~~vl~-----~l~~~Lgl~~---e~~~~S~~~l~r~GNtsSaSi~~~La~~---~~~g~l~---------- 491 (537)
+++..|-.|..+-| .+.+.++-.. ..+.- -.+=..+||+-+++-...|... +++|.+-
T Consensus 336 ~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~v-gSvKs~iGH~~~AAG~a~lik~~lal~~~~iPp~~~~~~pnp 414 (2582)
T TIGR02813 336 GLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIAL-GSVKSQIGHTKSTAGTAGMIKAVLALHHKVLPPTINVDQPNP 414 (2582)
T ss_pred CEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCcee-eccccccccchHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCC
Confidence 99999987776644 4455565321 11110 1223468999999888777542 2332210
Q ss_pred ----------------------CC--CEEEEEEEchHHHhhheeEEEec
Q 009313 492 ----------------------RG--DRVWQIAFGSGFKCNSVVWQAMR 516 (537)
Q Consensus 492 ----------------------~G--d~VlliafGsG~~~~s~v~r~~~ 516 (537)
.| .++..-+||.|-+..+++++--.
T Consensus 415 ~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGfGGtN~hvvlee~~ 463 (2582)
T TIGR02813 415 KLDIENSPFYLNTETRPWMQREDGTPRRAGISSFGFGGTNFHMVLEEYS 463 (2582)
T ss_pred CCCccccceeecCCcccCcccCCCCccEEEEeCccCCCeeEEEEEeecC
Confidence 11 45778889998888889988654
No 118
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=98.86 E-value=1.1e-08 Score=103.73 Aligned_cols=96 Identities=11% Similarity=0.200 Sum_probs=82.7
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHH
Q 009313 197 EASMVMFGALDELFEKTKVRPKDVGILVVNCSI-FNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQ 275 (537)
Q Consensus 197 ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~-~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~ 275 (537)
..++|+..|++++|++++++|++||.+|++|.. ....+..+..++-..|++.+++++.|+ +.|++|+.|+..|...|+
T Consensus 25 ~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp~~~V~-~~CaSG~~Av~~a~~~I~ 103 (264)
T PF00108_consen 25 SPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVPATTVN-RACASGLQAVHLAAMAIA 103 (264)
T ss_dssp -HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSEEEEEE--GGGHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccceeeeh-hhhhHHHHHHHHhhhhhc
Confidence 456778999999999999999999999999864 333677788888999998889999999 799999999999999999
Q ss_pred cCCCCeEEEEEecccccc
Q 009313 276 ANPNNYAVVVSTEMVGYN 293 (537)
Q Consensus 276 ~g~~~~aLVVs~E~~S~~ 293 (537)
+|..+.+|+++.|.+|..
T Consensus 104 sG~~dvvlagGvE~mS~~ 121 (264)
T PF00108_consen 104 SGEADVVLAGGVESMSRV 121 (264)
T ss_dssp TTS-SEEEEEEEEETTTS
T ss_pred CCCccEEEEecccccccc
Confidence 999999999999999873
No 119
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=98.81 E-value=3e-08 Score=98.90 Aligned_cols=121 Identities=21% Similarity=0.298 Sum_probs=85.4
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCC------ccEEEEeccCC-----------C------C------Cc-cHHHHHHHHcC
Q 009313 196 LEASMVMFGALDELFEKTKVRPKD------VGILVVNCSIF-----------N------P------TP-SLSAMIINHYK 245 (537)
Q Consensus 196 ~ea~~l~~~Aa~~aL~~agi~~~d------Id~LI~~ss~~-----------~------~------~P-s~a~~I~~~lG 245 (537)
.....++..|+.+||+++|+++++ +++++-++..+ . + .| ..+.+|+..+|
T Consensus 85 ~~~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g 164 (254)
T PF00109_consen 85 DRQSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFG 164 (254)
T ss_dssp -HHHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHT
T ss_pred hhhhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcC
Confidence 467788999999999999998843 44444333221 0 1 23 35889999999
Q ss_pred CCCCeeEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEec-ccccc---------cCCCC------CcCCCcccccc
Q 009313 246 MRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTE-MVGYN---------WYAGR------DRSMMIPNCFF 309 (537)
Q Consensus 246 l~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E-~~S~~---------~~~~~------dr~~ll~~~lf 309 (537)
++ .+++.++ .+|++++.||..|.++|++|..+.|||.++| .++.. ....+ |+.. ...++
T Consensus 165 l~--G~~~tv~-~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf~~~~--~G~v~ 239 (254)
T PF00109_consen 165 LR--GPSYTVS-TACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSADGPCRPFDPFA--DGFVL 239 (254)
T ss_dssp B---SSEEEEE--GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGSTBTTB---SB-B
T ss_pred CC--Ccccccc-ccccccccccchhccccccccccccccccccccccccccccccccccccccccccccCCCC--CCEEE
Confidence 98 4888999 6999999999999999999999999999999 44431 01111 1111 35889
Q ss_pred ccceEEEEEecc
Q 009313 310 RMGCSAILMSNR 321 (537)
Q Consensus 310 gDGAAAvLLs~~ 321 (537)
|+||+++||++.
T Consensus 240 gEGa~~~vLe~~ 251 (254)
T PF00109_consen 240 GEGAGALVLERL 251 (254)
T ss_dssp B-EEEEEEEEEH
T ss_pred ECceEEEEEEEh
Confidence 999999999864
No 120
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=98.73 E-value=1.2e-06 Score=93.47 Aligned_cols=87 Identities=15% Similarity=0.158 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHhCC-CCC-CCccEEEEeccCCC-CCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHH
Q 009313 199 SMVMFGALDELFEKTK-VRP-KDVGILVVNCSIFN-PTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQ 275 (537)
Q Consensus 199 ~~l~~~Aa~~aL~~ag-i~~-~dId~LI~~ss~~~-~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~ 275 (537)
.+++.+|++++|+++| +++ +|||.+++++.... ........++..+|+.. .+.+.+ |+++..++..|...++
T Consensus 26 ~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~~-~~~~~v----~~sg~~a~~~A~~aV~ 100 (385)
T PRK06066 26 REMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGAM-RPTMTV----AGDGLQGLAHAVMHIN 100 (385)
T ss_pred HHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccCC-CCeEEE----eCcHHHHHHHHHHHHH
Confidence 4667999999999999 997 79999987542211 11112335678899852 345554 7788999999999999
Q ss_pred cCCCCeEEEEEeccc
Q 009313 276 ANPNNYAVVVSTEMV 290 (537)
Q Consensus 276 ~g~~~~aLVVs~E~~ 290 (537)
+|..++|||++.|..
T Consensus 101 sG~~d~vLv~g~~~~ 115 (385)
T PRK06066 101 SGLANVVVVEAHSKP 115 (385)
T ss_pred cCCCCEEEEEEEeec
Confidence 999999999999864
No 121
>PRK07855 lipid-transfer protein; Provisional
Probab=98.65 E-value=3.5e-06 Score=90.06 Aligned_cols=83 Identities=14% Similarity=0.102 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCC
Q 009313 200 MVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPN 279 (537)
Q Consensus 200 ~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~ 279 (537)
+++.+|++++|+++|++++|||.+++++.. ..+. ..+++.+|+++-.+..++. +||+++..++..|...+++|..
T Consensus 26 ~L~~eA~~~Al~DAgl~~~dID~~~~~~~~--~~~~--~~l~~~lGl~~~~~~~~v~-~gg~sg~~~~~~A~~~I~sG~~ 100 (386)
T PRK07855 26 RLACEAVLAALDDAGLAPSDVDGLVTFTMD--TNPE--IAVARALGIGELKFFSRIH-YGGGAACATVQQAAMAVATGVA 100 (386)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCc--cccH--HHHHHHCCCCCCcceeeec-CCcHHHHHHHHHHHHHHHCCCC
Confidence 456999999999999999999999864332 1222 4588999997424556888 6999999999999999999999
Q ss_pred CeEEEEEe
Q 009313 280 NYAVVVST 287 (537)
Q Consensus 280 ~~aLVVs~ 287 (537)
++|||+++
T Consensus 101 d~vLv~g~ 108 (386)
T PRK07855 101 DVVVCYRA 108 (386)
T ss_pred CEEEEEee
Confidence 99999987
No 122
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.56 E-value=3.2e-06 Score=90.76 Aligned_cols=123 Identities=12% Similarity=0.159 Sum_probs=90.5
Q ss_pred hhhhHHHHHHHHHHHHHHhCCCC-CCCcc--E-EEEeccC---C---------------C---------CCc-cHHHHHH
Q 009313 194 GRLEASMVMFGALDELFEKTKVR-PKDVG--I-LVVNCSI---F---------------N---------PTP-SLSAMII 241 (537)
Q Consensus 194 ~~~ea~~l~~~Aa~~aL~~agi~-~~dId--~-LI~~ss~---~---------------~---------~~P-s~a~~I~ 241 (537)
..+...+++..|+.+|++++|++ ..+++ + +++.++. . . ..| ..+..++
T Consensus 67 ~~d~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs 146 (412)
T COG0304 67 FMDRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVA 146 (412)
T ss_pred cccHHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHH
Confidence 34567788999999999999998 33342 2 2233320 0 0 123 3477899
Q ss_pred HHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEecc-ccc--------------c-------cCC-CC
Q 009313 242 NHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEM-VGY--------------N-------WYA-GR 298 (537)
Q Consensus 242 ~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~-~S~--------------~-------~~~-~~ 298 (537)
..+|++ -+.+.++ .+|+++..||..|.++|+.|..+.+++.++|. ++. . +.+ ..
T Consensus 147 ~~~g~~--G~~~~~~-tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPfd~ 223 (412)
T COG0304 147 IVFGLK--GPNYTPV-TACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDK 223 (412)
T ss_pred HHhCCC--CCcCChh-hhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCCCC
Confidence 999998 5889999 59999999999999999999999999999976 332 1 111 12
Q ss_pred CcCCCccccccccceEEEEEeccCc
Q 009313 299 DRSMMIPNCFFRMGCSAILMSNRRR 323 (537)
Q Consensus 299 dr~~ll~~~lfgDGAAAvLLs~~~~ 323 (537)
+|+ ..++|+||+++||+..+.
T Consensus 224 ~Rd----Gfv~gEGag~lVLE~~eh 244 (412)
T COG0304 224 NRD----GFVIGEGAGALVLEELEH 244 (412)
T ss_pred CCC----CEEEecceeEEEecChhh
Confidence 355 578999999999998664
No 123
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=98.53 E-value=4.3e-07 Score=98.51 Aligned_cols=94 Identities=20% Similarity=0.235 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCC--ccEEEEeccC---CCCCccHHHHHHHHcCCC------CCeeEEEecCccchHHHHH
Q 009313 198 ASMVMFGALDELFEKTKVRPKD--VGILVVNCSI---FNPTPSLSAMIINHYKMR------GNIISYNLGGMGCSAGVIG 266 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~d--Id~LI~~ss~---~~~~Ps~a~~I~~~lGl~------~~~~~~~l~g~gCs~gl~A 266 (537)
.++|+.+|++++|+++|++++| ||.+|+++.. +...+.++..++..+|++ ..++++.+. .+|++|+.|
T Consensus 48 ~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V~-~~caSG~~A 126 (438)
T PTZ00455 48 LEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVE-GACASGGLA 126 (438)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCceeEEE-CcCHHHHHH
Confidence 3566799999999999999999 9999987642 112355566777665554 368999999 799999999
Q ss_pred HHHHHHHHHcCCCCeEEEEEeccccc
Q 009313 267 VDLARDMLQANPNNYAVVVSTEMVGY 292 (537)
Q Consensus 267 L~lA~~lL~~g~~~~aLVVs~E~~S~ 292 (537)
+..|...|++|..+.+||+++|.+|.
T Consensus 127 i~~A~~~I~sG~~dvvlv~G~E~ms~ 152 (438)
T PTZ00455 127 VQSAWEALLAGTSDIALVVGVEVQTT 152 (438)
T ss_pred HHHHHHHHHCCCCCEEEEEEEeeccc
Confidence 99999999999999999999999875
No 124
>PRK07937 lipid-transfer protein; Provisional
Probab=98.46 E-value=1.4e-05 Score=84.39 Aligned_cols=88 Identities=13% Similarity=0.032 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCc--cHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHc
Q 009313 199 SMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTP--SLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQA 276 (537)
Q Consensus 199 ~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~P--s~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~ 276 (537)
.+++.+|+++||+++|++++|||.++.+++ +.... .....+...+|+.+..+...+. ++|..|+..|...+++
T Consensus 25 ~el~~eA~~~Al~DAgl~~~dID~~~~~~~-~~~~~~~~~~~~~~~~~G~~~~~~~~~v~----~~g~~a~~~A~~aI~s 99 (352)
T PRK07937 25 VEMLMPCFAELYAELGITKSDIGFWCSGSS-DYLAGRAFSFISAIDSIGAVPPINESHVE----MDAAWALYEAWVKLLT 99 (352)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcc-ccccccccchhhHHhhccCCCCCceEEec----CcHHHHHHHHHHHHhc
Confidence 356799999999999999999998864433 21111 1123455678884344555555 3577799999999999
Q ss_pred CCCCeEEEEEecccc
Q 009313 277 NPNNYAVVVSTEMVG 291 (537)
Q Consensus 277 g~~~~aLVVs~E~~S 291 (537)
|..++|||++.|..+
T Consensus 100 G~~d~VLv~g~~k~~ 114 (352)
T PRK07937 100 GEVDTALVYGFGKSS 114 (352)
T ss_pred CCCCEEEEEEecccC
Confidence 999999999998653
No 125
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=98.44 E-value=9e-07 Score=95.77 Aligned_cols=94 Identities=13% Similarity=0.192 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCC-CCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHc
Q 009313 198 ASMVMFGALDELFEKTKVRPKDVGILVVNCSIFN-PTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQA 276 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~-~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~ 276 (537)
..+++..|++++|+++|++++|||.+|+++.... ..+..+..+.-..|++..++++.++ ++|++|+.|+..|..+|++
T Consensus 31 ~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~p~~~V~-~~CaSG~~ai~~A~~~I~s 109 (427)
T PRK09268 31 NQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYTPAYDLQ-QACGTGLEAAILVANKIAL 109 (427)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCCceeeee-chhhHHHHHHHHHHHHHHC
Confidence 4566799999999999999999999999875321 1244566666666776568999999 7999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 009313 277 NPNNYAVVVSTEMVGY 292 (537)
Q Consensus 277 g~~~~aLVVs~E~~S~ 292 (537)
|..+.+||++.|.+|.
T Consensus 110 G~~d~vlvgG~E~ms~ 125 (427)
T PRK09268 110 GQIDSGIAGGVDTTSD 125 (427)
T ss_pred CCCCEEEEeeEEccCC
Confidence 9999999999999885
No 126
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=98.36 E-value=9.1e-06 Score=82.59 Aligned_cols=94 Identities=17% Similarity=0.163 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHc
Q 009313 198 ASMVMFGALDELFEKTKVRPKDVGILVVNCSI-FNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQA 276 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~-~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~ 276 (537)
|.+++.-|++.+|++++++++|++-+|+++.. -+.--..+.+.+---|++.++++..++ +.|++|+.|+.+|.+-|+.
T Consensus 30 A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv~~tTvN-kvCaSgmKAv~laaQsI~~ 108 (396)
T KOG1390|consen 30 ATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSVPATTVN-KVCASGMKAVILAAQSIQT 108 (396)
T ss_pred hhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCcceeeEeeh-hhhhhhHHHHHHHHHHHhc
Confidence 45567899999999999999999989988642 333334567777778898889999999 9999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 009313 277 NPNNYAVVVSTEMVGY 292 (537)
Q Consensus 277 g~~~~aLVVs~E~~S~ 292 (537)
|..+.++..+.|.+|.
T Consensus 109 G~~divVaGGmEsMS~ 124 (396)
T KOG1390|consen 109 GHADIVVAGGMESMSN 124 (396)
T ss_pred CCccEEEecccchhcc
Confidence 9999999999999986
No 127
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.25 E-value=5.8e-05 Score=90.12 Aligned_cols=294 Identities=15% Similarity=0.134 Sum_probs=170.9
Q ss_pred CceEEEEEeEEeCCCCcccCHHHHHHHHhccC----CCChhhHHHHHHHHHHcC-----CceeEEccCCcc------ccc
Q 009313 121 RSVYLVDFACYRPSDDLKVTREQFIEVAGKWS----KSDEASLDFQRRIMKSSG-----IGDETYIPKVVM------SAE 185 (537)
Q Consensus 121 ~~v~I~~~~~y~P~~~~~vt~e~~~e~~~~~~----~~~~~~~~f~~~i~~~sG-----I~~r~~~~~~~~------~~p 185 (537)
.+|=|+|++|.+|. .-+.++|++.+.... .+.++. |=.+..+ ...++|...+.. ..|
T Consensus 4 ~~IAIiGm~~rfPg---a~~~~~~W~~l~~g~~~i~~ip~~r-----wd~~~~~~~~~~~~gk~~~~~ggfl~~~~~FD~ 75 (1061)
T COG3321 4 EPIAIIGMACRFPG---ADSPEEFWDLLKEGRDEITEVPADR-----WDVDAYYDPDPTVPGKSYSRWGGFLDDVDDFDA 75 (1061)
T ss_pred CcEEEEeccccCCC---CCCHHHHHHHHhcCCceeeecChhh-----hhHhhccCCccccccccccccccccCCccccCH
Confidence 34899999999999 567899999886521 122221 1111111 111112111100 000
Q ss_pred ---cccchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCcc----EEEEec-cCCCCCc-------------------cHHH
Q 009313 186 ---ENCMTMKHGRLEASMVMFGALDELFEKTKVRPKDVG----ILVVNC-SIFNPTP-------------------SLSA 238 (537)
Q Consensus 186 ---~~~~~ma~~~~ea~~l~~~Aa~~aL~~agi~~~dId----~LI~~s-s~~~~~P-------------------s~a~ 238 (537)
...+..+++-+--+.+..+.+-++|+++|+.|+.+. .|+.+. ..+|... -.+.
T Consensus 76 ~fFgisPrEA~~mDPQqRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~ 155 (1061)
T COG3321 76 LFFGISPREAEAMDPQQRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAG 155 (1061)
T ss_pred HHcCCCHHHHHhcCchHhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHH
Confidence 012334445556667899999999999999998776 344443 3233211 2588
Q ss_pred HHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEeccccc--ccC--------C--CCCcC--CCc
Q 009313 239 MIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGY--NWY--------A--GRDRS--MMI 304 (537)
Q Consensus 239 ~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~--~~~--------~--~~dr~--~ll 304 (537)
+|+..|+++ .+++.|. .+||+++.|+++|.+.|+.|..+.||+-+....-. .++ . ++-+. .=-
T Consensus 156 Risy~l~l~--GPs~~vd-taCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~a 232 (1061)
T COG3321 156 RISYVLGLS--GPSVTVD-TACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADA 232 (1061)
T ss_pred HHHHHhcCC--CCCcccc-chhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceecccCC
Confidence 899999997 5999999 79999999999999999999999998888766421 111 1 11110 001
Q ss_pred cccccccceEEEEEeccCccccccceeeeeEEEEE-eccCCCccccceeccccccccccccchhhhhhhccccccccccc
Q 009313 305 PNCFFRMGCSAILMSNRRRDYHRAKYRLQLIVRTH-TGADDRSFRSVYQEEDEQGFRGLKVSKNIMEIGGDALKTNITTL 383 (537)
Q Consensus 305 ~~~lfgDGAAAvLLs~~~~~~~~~~~~L~~~v~t~-~~sd~~~~~~v~~~~d~~G~~g~~ls~dl~~~~g~~lk~ni~~l 383 (537)
..++.|.|+++++|-+-.... +.+-++..+++.. ...|+.. . |+ +.
T Consensus 233 dG~v~geG~g~vvLKrl~~A~-~dgd~IyavI~gsavn~dG~~-~------------gl------------------ta- 279 (1061)
T COG3321 233 DGYVRGEGAGVVVLKRLSDAE-RDGDRIYAVIRGSAVNQDGRS-N------------GL------------------TA- 279 (1061)
T ss_pred CCEEEeeeEEEEEEEEhHHHH-hCCCeEEEEEEeeeeccCCCc-C------------CC------------------CC-
Confidence 246899999999998754321 1122333333321 1222211 0 11 11
Q ss_pred CCCccccchhhHHHHHHHHHHHHhhhhhhcccccccCCCCCCcCccccccEEEEcCCCHHHHHHH-----HHHcCCC-hh
Q 009313 384 GPLVLPFSEQLFFFATLVWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVHAASKTVLDEL-----QKNLELS-EK 457 (537)
Q Consensus 384 gp~vlp~se~~~~~~~~~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H~~g~~vl~~l-----~~~Lgl~-~e 457 (537)
|.. .-| ..+.++.++. ++++| .+|+++=.|..|..+-|.+ .+.++-. ++
T Consensus 280 -P~~---~aQ-----~~v~~~al~~----------a~i~p------~tv~yvEaHgTGT~lGDpiE~~aL~~v~~~~~~~ 334 (1061)
T COG3321 280 -PNL---EAQ-----ADVIREALAD----------AGIDP------ATVQYVEAHGTGTPLGDPIEANALGAVYGEGAPA 334 (1061)
T ss_pred -CCH---HHH-----HHHHHHHHHh----------cCCCc------ccCcEEEecCCCCCCcCHHHHHHHHHHhccCCCC
Confidence 100 001 1123555554 89998 9999999999887766554 3444422 22
Q ss_pred hhhhhhhccccccccccchHHHHHHH
Q 009313 458 NMEASRMTLHRFGNTSSSSIWYELAY 483 (537)
Q Consensus 458 ~~~~S~~~l~r~GNtsSaSi~~~La~ 483 (537)
+.+.--..=.+.||+.+|.-...|-.
T Consensus 335 ~~c~iGSvKsNiGH~~~AaGiagliK 360 (1061)
T COG3321 335 QPCAIGSVKSNIGHLEAAAGIAGLIK 360 (1061)
T ss_pred CcccccccccccccHHHHHHHHHHHH
Confidence 33221334456899988877666643
No 128
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=98.18 E-value=6.2e-05 Score=76.60 Aligned_cols=115 Identities=15% Similarity=0.212 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCC
Q 009313 200 MVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPN 279 (537)
Q Consensus 200 ~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~ 279 (537)
.+..+|++.+|+|++++++|||.++-+--....++ +.+.++.|++ +-+.+.| +||....+|.+|..++..|-.
T Consensus 53 ~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~i~--s~f~ar~l~i----Pf~Glyg-ACST~~e~l~laa~~vdgg~a 125 (329)
T PF07451_consen 53 KMQKEAVELALKKAGLKKEDIDYLFAGDLLNQIIS--SSFAARDLGI----PFLGLYG-ACSTMMESLALAAMLVDGGFA 125 (329)
T ss_dssp HHHHHHHHHHHHHTT--GGG-SEEEEEETTCCCCH--HHHHHHHHT------EEEB---CCCHHHHHHHHHHHHHHTTS-
T ss_pred HHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhhHH--HHHHHHhcCC----Cccchhh-HHHHHHHHHHHHHHHHhCCCc
Confidence 56789999999999999999999985544444443 4678888865 7899996 999999999999999999999
Q ss_pred CeEEEEEeccccc---ccCC----CCCcCCCccccccccceEEEEEeccCc
Q 009313 280 NYAVVVSTEMVGY---NWYA----GRDRSMMIPNCFFRMGCSAILMSNRRR 323 (537)
Q Consensus 280 ~~aLVVs~E~~S~---~~~~----~~dr~~ll~~~lfgDGAAAvLLs~~~~ 323 (537)
+++|+.++-.... .|.. +..|.. +...---||+|+||++.+.
T Consensus 126 ~~vla~tSSH~~tAERQfR~P~EyG~Qrp~--tAqwTVTGaGa~il~~~~~ 174 (329)
T PF07451_consen 126 DYVLAATSSHFATAERQFRFPTEYGGQRPP--TAQWTVTGAGAAILSKEGS 174 (329)
T ss_dssp SEEEEEEEE-CCHHHHHT---GGGT----T--T--EE--EEEEEEEESS--
T ss_pred ceEEEEeccccchhhhhccCchhccCCCCC--cccEEEeceEEEEEecCCC
Confidence 9999888766442 2222 233432 3445567999999997765
No 129
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=98.17 E-value=2.8e-05 Score=78.85 Aligned_cols=93 Identities=16% Similarity=0.192 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHH-HHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCC
Q 009313 200 MVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMI-INHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANP 278 (537)
Q Consensus 200 ~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I-~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~ 278 (537)
++...+.+..+++++++|+.|+-+++++....-.-...+++ +-.-|++..++...++ -.|++|+.|+.....-+++|.
T Consensus 63 eLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~ga~e~R~a~~~ag~P~tvpv~tvN-RqCsSGLqaVadiA~~Ir~G~ 141 (435)
T KOG1389|consen 63 ELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSGASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADIAAKIRAGF 141 (435)
T ss_pred HHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcchHHHHHHHHHcCCCcccchhhhh-hhhhhHHHHHHHHHHHHhcCc
Confidence 34578889999999999999999988864321112444444 4455888778888888 799999999999999999999
Q ss_pred CCeEEEEEecccccc
Q 009313 279 NNYAVVVSTEMVGYN 293 (537)
Q Consensus 279 ~~~aLVVs~E~~S~~ 293 (537)
.+.-|-.+.|.+|.+
T Consensus 142 ydIGla~GvESMt~~ 156 (435)
T KOG1389|consen 142 YDIGLAAGVESMTTN 156 (435)
T ss_pred eeeecccchhhhccc
Confidence 999999999998875
No 130
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.93 E-value=6.8e-05 Score=77.47 Aligned_cols=121 Identities=12% Similarity=0.183 Sum_probs=88.2
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCC-----C---ccEEEEecc---------------------CCCCCc----cH-HHHHH
Q 009313 196 LEASMVMFGALDELFEKTKVRPK-----D---VGILVVNCS---------------------IFNPTP----SL-SAMII 241 (537)
Q Consensus 196 ~ea~~l~~~Aa~~aL~~agi~~~-----d---Id~LI~~ss---------------------~~~~~P----s~-a~~I~ 241 (537)
.....++..|+++||+++|+-+. | -+++|-.+. ..+..| ++ +.+|+
T Consensus 92 s~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vs 171 (440)
T KOG1394|consen 92 SKFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVS 171 (440)
T ss_pred hHHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhh
Confidence 35778899999999999998765 2 223442221 011223 33 78899
Q ss_pred HHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEecccccc-----c-------C---------CC--C
Q 009313 242 NHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYN-----W-------Y---------AG--R 298 (537)
Q Consensus 242 ~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~-----~-------~---------~~--~ 298 (537)
-+||++ .+.+.++ .+|+.|..+|.-|.++|+.|..+..|.-++|.+-.. | . ++ .
T Consensus 172 m~~gl~--GpnhsvS-TACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~ 248 (440)
T KOG1394|consen 172 MKYGLR--GPNHSVS-TACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDK 248 (440)
T ss_pred hhhcCc--CCchhhH-hhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCCcc
Confidence 999998 5889999 799999999999999999999999998888874210 0 0 01 2
Q ss_pred CcCCCccccccccceEEEEEeccCc
Q 009313 299 DRSMMIPNCFFRMGCSAILMSNRRR 323 (537)
Q Consensus 299 dr~~ll~~~lfgDGAAAvLLs~~~~ 323 (537)
+|+ ..++|+|++.+||+.-+.
T Consensus 249 ~Rd----GFVmGEGagvlvlEelEH 269 (440)
T KOG1394|consen 249 KRD----GFVMGEGAGVLVLEELEH 269 (440)
T ss_pred CCC----ceeeccceeEEehHhHHH
Confidence 344 578999999999987543
No 131
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=97.74 E-value=0.00011 Score=78.85 Aligned_cols=93 Identities=14% Similarity=0.264 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHhC--CCCCCCccEEEEeccCC--CCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHH
Q 009313 200 MVMFGALDELFEKT--KVRPKDVGILVVNCSIF--NPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQ 275 (537)
Q Consensus 200 ~l~~~Aa~~aL~~a--gi~~~dId~LI~~ss~~--~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~ 275 (537)
.+.....+..+++. ++++.+||.+|++|... ...+..+..++...|++.+++.+.++ .+|++|+.|+.+|...|+
T Consensus 29 ~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~~~~p~~~V~-~~c~SG~~Av~~A~~~I~ 107 (392)
T COG0183 29 ALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSVPAVTVN-RACASGLAAVRLAAQAIA 107 (392)
T ss_pred HHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCCCCCCceEEe-ccchhHHHHHHHHHHHHH
Confidence 33444455555433 68888899889887543 34667888999999998779999999 799999999999999999
Q ss_pred cCCCCeEEEEEecccccc
Q 009313 276 ANPNNYAVVVSTEMVGYN 293 (537)
Q Consensus 276 ~g~~~~aLVVs~E~~S~~ 293 (537)
+|..+.+|+++.|++|..
T Consensus 108 sG~~dvvlagG~E~mS~~ 125 (392)
T COG0183 108 SGEADVVLAGGVEKMSDA 125 (392)
T ss_pred CCCCCEEEEEeeeeccCC
Confidence 999999999999999873
No 132
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=96.98 E-value=0.001 Score=66.45 Aligned_cols=86 Identities=16% Similarity=0.230 Sum_probs=69.3
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCCC
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVNCS-IFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPNN 280 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ss-~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~~ 280 (537)
+.+|+.++|++++++-++|+--+++-. .+... ..+-.-++||. .++.|+++ +.|++|-.||-+|++++++|..+
T Consensus 33 a~ea~tkal~da~ikys~vqqa~vgyvfgdstc---gqraiyevgmt-gipi~nvn-nncatgssalflakqiiesgn~d 107 (408)
T KOG1406|consen 33 AKEAITKALQDAGIKYSEVQQAVVGYVFGDSTC---GQRAIYEVGMT-GIPIYNVN-NNCATGSSALFLAKQIIESGNSD 107 (408)
T ss_pred HHHHHHHHHHhcCCCHHHHHhhhheeeecCCcc---chHHHHhcccc-Ccceeecc-CccccCchHHHHHHHHHhcCCcc
Confidence 399999999999999888875433311 11111 13344589998 69999999 79999999999999999999999
Q ss_pred eEEEEEeccccc
Q 009313 281 YAVVVSTEMVGY 292 (537)
Q Consensus 281 ~aLVVs~E~~S~ 292 (537)
.||..+-|.+++
T Consensus 108 cvlalgfekm~~ 119 (408)
T KOG1406|consen 108 CVLALGFEKMER 119 (408)
T ss_pred eEEeechhhhCC
Confidence 999999999876
No 133
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A ....
Probab=96.78 E-value=0.0011 Score=67.91 Aligned_cols=60 Identities=23% Similarity=0.310 Sum_probs=44.2
Q ss_pred hhhhhhhccccccccccchHHHHHHHHH--HcCCCCCCCEEEEEEEchHHHhhheeEEEecc
Q 009313 458 NMEASRMTLHRFGNTSSSSIWYELAYLE--AKERVKRGDRVWQIAFGSGFKCNSVVWQAMRR 517 (537)
Q Consensus 458 ~~~~S~~~l~r~GNtsSaSi~~~La~~~--~~g~l~~Gd~VlliafGsG~~~~s~v~r~~~~ 517 (537)
++.||...-.+.||+.++|++..|+.++ ..+..-.|+||.+.++|||......-++....
T Consensus 143 kv~psl~~~~~vGN~YTaSly~~L~SlL~~~~~~~l~GkrI~~FSYGSG~~s~~fs~~v~~~ 204 (282)
T PF08540_consen 143 KVEPSLLYSRQVGNMYTASLYLGLASLLSSAEADDLAGKRIGMFSYGSGLASEFFSGRVQPG 204 (282)
T ss_dssp HCHHHTHHHHHHB--GGGHHHHHHHHHHHHHHSCHHTT-EEEEEEEETTTEEEEEEEEE-TT
T ss_pred HHhHHHHHHHHcCceehHHHHHHHHHHhhccCccccCCCEEEEEEecCCcceeEEEEEEeCC
Confidence 5666767778899999999999999998 34444579999999999997766666655543
No 134
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=96.23 E-value=0.0075 Score=60.19 Aligned_cols=91 Identities=10% Similarity=0.043 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEec----cCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHH
Q 009313 199 SMVMFGALDELFEKTKVRPKDVGILVVNC----SIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDML 274 (537)
Q Consensus 199 ~~l~~~Aa~~aL~~agi~~~dId~LI~~s----s~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL 274 (537)
.++..-|++.+|+.+++.++.+|.+|++. |.+- -.++.+|--+.|.+.+.++..|+ -=|.+|..++-.+.+-+
T Consensus 29 TdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDg--IYl~RHvGL~~GvP~e~pALtiN-RLCGSGFQsiVNgaQ~I 105 (396)
T KOG1391|consen 29 TDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDG--IYLARHVGLRVGVPKETPALTIN-RLCGSGFQSIVNGAQEI 105 (396)
T ss_pred hhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCc--eEeeeccccccCCcCccCceeeh-hhhcccHHHHHhhHHHh
Confidence 34458899999999999999999999864 3322 12345555666677788999999 79999999999999999
Q ss_pred HcCCCCeEEEEEeccccc
Q 009313 275 QANPNNYAVVVSTEMVGY 292 (537)
Q Consensus 275 ~~g~~~~aLVVs~E~~S~ 292 (537)
..+..+.+|.-++|++|.
T Consensus 106 ~vgea~ivL~GGtEnMSq 123 (396)
T KOG1391|consen 106 CVGEAEIVLCGGTENMSQ 123 (396)
T ss_pred hcCcceEEEecCcccccc
Confidence 999999999999999986
No 135
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=94.56 E-value=0.029 Score=56.80 Aligned_cols=93 Identities=14% Similarity=0.173 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcC
Q 009313 199 SMVMFGALDELFEKTKVRPKDVGILVVNCSI-FNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQAN 277 (537)
Q Consensus 199 ~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~-~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g 277 (537)
.+++.+|...+|+++.++.+.+|.+|+++.. ..-+..++..-+-.-|++..+++..+. |+|-+.-.|+...-.+|.+|
T Consensus 67 hdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdktpahtvt-macissn~amttgmgliatg 145 (465)
T KOG1392|consen 67 HDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDKTPAHTVT-MACISSNVAMTTGMGLIATG 145 (465)
T ss_pred hHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCCCCCCccceee-eehhccchhhhccceeEeeC
Confidence 4556999999999999999999999988753 444566677777777888788999999 99999999999999999999
Q ss_pred CCCeEEEEEeccccc
Q 009313 278 PNNYAVVVSTEMVGY 292 (537)
Q Consensus 278 ~~~~aLVVs~E~~S~ 292 (537)
..+.++.-+.|.+|.
T Consensus 146 ~~dvivaggvelmsd 160 (465)
T KOG1392|consen 146 NADVIVAGGVELMSD 160 (465)
T ss_pred CcCEEEEcceeeccc
Confidence 888777788898885
No 136
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=93.72 E-value=0.068 Score=44.81 Aligned_cols=76 Identities=14% Similarity=0.229 Sum_probs=46.6
Q ss_pred HHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEE---ecCccchHHHHHHHHHHHHHHcCCCCeEEEEE
Q 009313 210 FEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYN---LGGMGCSAGVIGVDLARDMLQANPNNYAVVVS 286 (537)
Q Consensus 210 L~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~---l~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs 286 (537)
|+++|++++|||.+|.... .......+.+++|++++....+ .+..+|++-..+|..+.+-=+..+++++|+++
T Consensus 1 L~~~g~~~~did~~i~hq~----~~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~ 76 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQA----SKKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVG 76 (90)
T ss_dssp HHHTT--GGGESEEEE-SS----SHHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEE
T ss_pred CccccCCHHHCCEEEeCCC----CHHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEE
Confidence 6899999999999996532 2345566999999975533333 33457777777775555432334678888887
Q ss_pred ecc
Q 009313 287 TEM 289 (537)
Q Consensus 287 ~E~ 289 (537)
.-.
T Consensus 77 ~G~ 79 (90)
T PF08541_consen 77 FGA 79 (90)
T ss_dssp EET
T ss_pred EEh
Confidence 543
No 137
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=93.43 E-value=0.12 Score=60.99 Aligned_cols=123 Identities=17% Similarity=0.235 Sum_probs=83.0
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCcc----EEEEecc-C--------------CCC-CccHHHHHHHHc----CCCCCeeE
Q 009313 197 EASMVMFGALDELFEKTKVRPKDVG----ILVVNCS-I--------------FNP-TPSLSAMIINHY----KMRGNIIS 252 (537)
Q Consensus 197 ea~~l~~~Aa~~aL~~agi~~~dId----~LI~~ss-~--------------~~~-~Ps~a~~I~~~l----Gl~~~~~~ 252 (537)
.-..+..++.-+|+-++||+|.+.. .+.+.|+ + +|. +-..-+|.+|++ .++ .++
T Consensus 86 Pq~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfq--GPS 163 (2376)
T KOG1202|consen 86 PQLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQ--GPS 163 (2376)
T ss_pred HHHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEecc--CCc
Confidence 3446678999999999999997653 2333332 1 011 122345666665 444 588
Q ss_pred EEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEeccccc-----ccC-------CCC----CcCCCccccccccceEEE
Q 009313 253 YNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGY-----NWY-------AGR----DRSMMIPNCFFRMGCSAI 316 (537)
Q Consensus 253 ~~l~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~-----~~~-------~~~----dr~~ll~~~lfgDGAAAv 316 (537)
|.+. .+|++.+.|+..|.+-++.+..++|+|-+.-.+-. .|. +|. |.+. ....=.||++|+
T Consensus 164 ~s~D-tacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeag--nGY~Rseg~~av 240 (2376)
T KOG1202|consen 164 FSVD-TACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAG--NGYCRSEGVVAV 240 (2376)
T ss_pred hhhh-hhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcCCCCcccchhccC--CceeecCceEEE
Confidence 8899 79999999999999999999999999988776422 111 111 1121 123356999999
Q ss_pred EEeccCcc
Q 009313 317 LMSNRRRD 324 (537)
Q Consensus 317 LLs~~~~~ 324 (537)
+|.++...
T Consensus 241 llqrk~~A 248 (2376)
T KOG1202|consen 241 LLQRKSLA 248 (2376)
T ss_pred EEehhHHH
Confidence 99987654
No 138
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=93.25 E-value=0.29 Score=53.09 Aligned_cols=91 Identities=13% Similarity=0.206 Sum_probs=64.5
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecCc--------cchHHHHHHHHHHHHH
Q 009313 203 FGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGM--------GCSAGVIGVDLARDML 274 (537)
Q Consensus 203 ~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~--------gCs~gl~AL~lA~~lL 274 (537)
..|++++|+++|++++|||.+.++- ..........+++|+.. ..++++|- |++|....+.+..++.
T Consensus 318 ~~Ai~~aL~~AGl~~~DID~~ei~e----aFa~~~l~~~~~lg~~~--~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~ 391 (417)
T PRK06025 318 VPAAKKVLAKAGLTKDDIDLWEINE----AFAVVAEKFIRDLDLDR--DKVNVNGGAIALGHPIGATGSILIGTVLDELE 391 (417)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEch----HHHHHHHHHHHHcCCCh--hhccccCCHHhcCCchhHHHHHHHHHHHHHHH
Confidence 5799999999999999999987541 12334456778888863 45666653 7888888888888887
Q ss_pred HcCCCCeEEEEEecccccccCCCCCcCCCccccccccceEEEEEec
Q 009313 275 QANPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSN 320 (537)
Q Consensus 275 ~~g~~~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~ 320 (537)
+.+ .++.|+ +.|..|-.++|+||++
T Consensus 392 ~~g-~~~Gl~--------------------~~c~~GG~g~A~lle~ 416 (417)
T PRK06025 392 RRG-LKRGLV--------------------TMCAAGGMAPAIIIER 416 (417)
T ss_pred HhC-CCeEEE--------------------EEEeeccceeEEEEEe
Confidence 655 444422 2356677777888875
No 139
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=92.83 E-value=2 Score=42.63 Aligned_cols=115 Identities=12% Similarity=-0.065 Sum_probs=77.8
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCC----------------CCCc---------cHHHHHHHHcCCCCCee
Q 009313 197 EASMVMFGALDELFEKTKVRPKDVGILVVNCSIF----------------NPTP---------SLSAMIINHYKMRGNII 251 (537)
Q Consensus 197 ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~----------------~~~P---------s~a~~I~~~lGl~~~~~ 251 (537)
....+++.++.+++++. +++|.+|++|..+ ...| ..+.++.-..|.+ .+
T Consensus 33 ~~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~~--~~ 106 (218)
T PF13723_consen 33 RLSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKNT--GP 106 (218)
T ss_pred HHHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCCC--Cc
Confidence 46677888888888652 5677888887421 2334 1234444445554 67
Q ss_pred EEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEecccccccCCCCCcCCCccccccccceEEEEEeccCc
Q 009313 252 SYNLGGMGCSAGVIGVDLARDMLQANPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRR 323 (537)
Q Consensus 252 ~~~l~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~~~~ 323 (537)
...+. .|=.++-.||.-|..+|+.+ .+.||||+.|-.....|.....+ .....--|.|++|+.+..
T Consensus 107 ~tal~-a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~~y~~~~~~----~~~~~~~A~al~L~~~~~ 172 (218)
T PF13723_consen 107 NTALA-AGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPEPYQEFRPE----RDPPFPYALALVLSPGDS 172 (218)
T ss_pred eEEEe-cCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCChhhhhcccc----cCCCcCEEEEEEecCCCC
Confidence 88888 58899999999999999999 89999999999766455432111 112234577788886554
No 140
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=91.73 E-value=0.63 Score=49.07 Aligned_cols=83 Identities=18% Similarity=0.231 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEE-----EecCccchHHHHHHHHHHH
Q 009313 198 ASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISY-----NLGGMGCSAGVIGVDLARD 272 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~-----~l~g~gCs~gl~AL~lA~~ 272 (537)
....+..+++++|+++|++++|||.+++.. +.+.+...+.+++|++++-... +++.+++++-..+|..+..
T Consensus 206 ~~~~~~~~~~~~L~~~gl~~~did~~i~Hq----~~~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~ 281 (345)
T TIGR00748 206 YFHHVVTAAKGLMEKLGLTPEDFDYAVFHQ----PNGKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLD 281 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEeCC----CChHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHH
Confidence 344556889999999999999999998542 2234556689999997432221 5666778888888866644
Q ss_pred HHHcCCCCeEEEEE
Q 009313 273 MLQANPNNYAVVVS 286 (537)
Q Consensus 273 lL~~g~~~~aLVVs 286 (537)
.+ .+++++|+++
T Consensus 282 ~~--~~Gd~vll~~ 293 (345)
T TIGR00748 282 IA--EPGDRILAVS 293 (345)
T ss_pred hc--CCCCEEEEEE
Confidence 22 2344554443
No 141
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=91.68 E-value=0.7 Score=49.31 Aligned_cols=88 Identities=15% Similarity=0.189 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHc-----CCCCCee---EEEecCccchHHHHHHHH
Q 009313 198 ASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHY-----KMRGNII---SYNLGGMGCSAGVIGVDL 269 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~l-----Gl~~~~~---~~~l~g~gCs~gl~AL~l 269 (537)
+......+++++|+++|++++|||.++... ..+..-..++++| |++++-. --.++.++|++...+|..
T Consensus 270 ~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq----~n~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L~~ 345 (378)
T PRK06816 270 IVVYTIKPLLELVDKRNLDPDDIDYFLPHY----SSEYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIMLDE 345 (378)
T ss_pred hHHHHHHHHHHHHHHcCCChhhCCEEeeCc----ccHHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHHHH
Confidence 444558889999999999999999998432 2344556778876 7864321 224555677777778866
Q ss_pred HHHHHHcCCCCeEEEEEecc
Q 009313 270 ARDMLQANPNNYAVVVSTEM 289 (537)
Q Consensus 270 A~~lL~~g~~~~aLVVs~E~ 289 (537)
|..-=+-.+++++++.+.|.
T Consensus 346 a~~~g~~~~Gd~vl~~~~~s 365 (378)
T PRK06816 346 LLNSGRLKPGQKILCFVPES 365 (378)
T ss_pred HHHcCCCCCCCEEEEEEecc
Confidence 53311123568888888775
No 142
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=90.06 E-value=0.6 Score=48.45 Aligned_cols=85 Identities=12% Similarity=0.172 Sum_probs=55.3
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEE---EecCccchHHHHHHHHHHH
Q 009313 196 LEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISY---NLGGMGCSAGVIGVDLARD 272 (537)
Q Consensus 196 ~ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~---~l~g~gCs~gl~AL~lA~~ 272 (537)
+++.....++++++|+++|++++|||.++... ..+.+-..+.+++|++++.... +.+.+++++-..+|+.+
T Consensus 223 ~~~~~~~~~~~~~~L~~~gl~~~did~~~~h~----~~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L~~~-- 296 (326)
T PRK05963 223 TEAVRMMSGASQNVLASAAMTPQDIDRFFPHQ----ANARIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSLSLA-- 296 (326)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCC----CCHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHHHHH--
Confidence 34556677889999999999999999988532 2355667789999997443221 23334445555555433
Q ss_pred HHHcC---CCCeEEEEEe
Q 009313 273 MLQAN---PNNYAVVVST 287 (537)
Q Consensus 273 lL~~g---~~~~aLVVs~ 287 (537)
++.+ +++++|+++.
T Consensus 297 -~~~~~~~~Gd~vll~~~ 313 (326)
T PRK05963 297 -NLEQPLREGERLLFAAA 313 (326)
T ss_pred -HHhCCCCCCCEEEEEEE
Confidence 3332 4577777764
No 143
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=89.95 E-value=1 Score=46.89 Aligned_cols=87 Identities=11% Similarity=0.170 Sum_probs=56.9
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEE---ecCccchHHHHHHHHHHH
Q 009313 196 LEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYN---LGGMGCSAGVIGVDLARD 272 (537)
Q Consensus 196 ~ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~---l~g~gCs~gl~AL~lA~~ 272 (537)
+++.....++++++|+++|++++|||.+++.. ..+.....+.+++|++++-...+ .+.+++++-..+|..+
T Consensus 235 ~~~~~~~~~~~~~~L~~~g~~~~did~~i~H~----~~~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~~~-- 308 (338)
T PRK09258 235 KEGVELAVDTWEAFLAQLGWAVEQVDRVICHQ----VGAAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAMA-- 308 (338)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEecCC----CCHHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHHHHHHHH--
Confidence 34555667788999999999999999988543 23445668999999974332222 4444555555555443
Q ss_pred HHHcC---CCCeEEEEEecc
Q 009313 273 MLQAN---PNNYAVVVSTEM 289 (537)
Q Consensus 273 lL~~g---~~~~aLVVs~E~ 289 (537)
++.+ +++++|+++...
T Consensus 309 -~~~g~~~~Gd~vll~~~G~ 327 (338)
T PRK09258 309 -AEEGFLKPGDRVALLGIGS 327 (338)
T ss_pred -HHhCCCCCCCEEEEEEech
Confidence 3332 467888777543
No 144
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=89.76 E-value=1.3 Score=45.71 Aligned_cols=77 Identities=17% Similarity=0.119 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCccHHHHHHHHcCCCC---CeeEEEecCccchHHHHHHHHHHHHHHc
Q 009313 201 VMFGALDELFEKTKVRPKDVGILVVNCS-IFNPTPSLSAMIINHYKMRG---NIISYNLGGMGCSAGVIGVDLARDMLQA 276 (537)
Q Consensus 201 l~~~Aa~~aL~~agi~~~dId~LI~~ss-~~~~~Ps~a~~I~~~lGl~~---~~~~~~l~g~gCs~gl~AL~lA~~lL~~ 276 (537)
-...+++++|+++|++++|||.++.... ......-........++.++ ....-+++.+++++++..|..+...++.
T Consensus 206 ~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~ 285 (332)
T cd00825 206 GLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEH 285 (332)
T ss_pred HHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHhc
Confidence 3467899999999999999999987643 22222222333444444310 1122355667888888888888777776
Q ss_pred C
Q 009313 277 N 277 (537)
Q Consensus 277 g 277 (537)
+
T Consensus 286 ~ 286 (332)
T cd00825 286 G 286 (332)
T ss_pred C
Confidence 5
No 145
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=89.59 E-value=0.83 Score=47.13 Aligned_cols=84 Identities=14% Similarity=0.247 Sum_probs=54.0
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEe---cCccchHHHHHHHHHHHH
Q 009313 197 EASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNL---GGMGCSAGVIGVDLARDM 273 (537)
Q Consensus 197 ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l---~g~gCs~gl~AL~lA~~l 273 (537)
+......++++++|+++|++++|||.+++.. ..+..-..+++++|++.+-...++ +.++|++-+.+|..+
T Consensus 216 ~~~~~~~~~~~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lgi~~~k~~~~~~~~Gn~~sas~~~~L~~~--- 288 (318)
T TIGR00747 216 HAVRKMGDVVEETLEANGLDPEDIDWFVPHQ----ANLRIIEALAKRLELDMSQVVKTVHKYGNTSAASIPLALDEL--- 288 (318)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHcCCCHHHeeehHhhhCCHHHHHHHHHHHHH---
Confidence 3444567789999999999999999998542 234566789999999743222222 334555555555443
Q ss_pred HHcC---CCCeEEEEEe
Q 009313 274 LQAN---PNNYAVVVST 287 (537)
Q Consensus 274 L~~g---~~~~aLVVs~ 287 (537)
++.+ +++++|+++.
T Consensus 289 ~~~~~~~~Gd~vll~~~ 305 (318)
T TIGR00747 289 LRTGRIKPGDLLLLVAF 305 (318)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 3333 3467776663
No 146
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=89.07 E-value=1.3 Score=46.05 Aligned_cols=82 Identities=11% Similarity=0.172 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEE---EecCccchHHHHHHHHHHHHH
Q 009313 198 ASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISY---NLGGMGCSAGVIGVDLARDML 274 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~---~l~g~gCs~gl~AL~lA~~lL 274 (537)
+......+++++|+++|++++|||.++.... .......++++||++++.... ..+..+|++...+|. .++
T Consensus 228 ~~~~~~~~i~~~L~~~gl~~~did~~~~H~~----~~~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~---~~~ 300 (329)
T PRK07204 228 SSKYLMKFIDKLLMDAGYTLADIDLIVPHQA----SGPAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALF---EAI 300 (329)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEeCCC----CHHHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHH---HHH
Confidence 4445668899999999999999999885532 123456889999997543332 233233444444443 345
Q ss_pred HcC---CCCeEEEEE
Q 009313 275 QAN---PNNYAVVVS 286 (537)
Q Consensus 275 ~~g---~~~~aLVVs 286 (537)
+.+ +++++|+++
T Consensus 301 ~~g~~~~Gd~vll~~ 315 (329)
T PRK07204 301 KQKKVQRGNKILLLG 315 (329)
T ss_pred HcCCCCCCCEEEEEE
Confidence 544 356776665
No 147
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=88.77 E-value=1.4 Score=45.55 Aligned_cols=83 Identities=11% Similarity=0.133 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEE---EecCccchHHHHHHHHHHHHH
Q 009313 198 ASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISY---NLGGMGCSAGVIGVDLARDML 274 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~---~l~g~gCs~gl~AL~lA~~lL 274 (537)
+......+++++|+++|++++|||.+++.. ..+.....+.+++|++.+.... +++.++|++...+|. +++
T Consensus 223 ~~~~~~~~i~~~L~~~g~~~~did~~~~h~----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L~---~~~ 295 (325)
T PRK12879 223 AVRTMPKGARQVLEKAGLTKDDIDWVIPHQ----ANLRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLALD---LAL 295 (325)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHHHHHH---HHH
Confidence 344456788999999999999999998552 2355567899999997432222 233344555555553 445
Q ss_pred HcC---CCCeEEEEEe
Q 009313 275 QAN---PNNYAVVVST 287 (537)
Q Consensus 275 ~~g---~~~~aLVVs~ 287 (537)
+.+ +++++|+++.
T Consensus 296 ~~g~~~~Gd~vll~~~ 311 (325)
T PRK12879 296 EQGKIKPGDTLLLYGF 311 (325)
T ss_pred HcCCCCCCCEEEEEEE
Confidence 554 3566766663
No 148
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=87.96 E-value=2 Score=46.40 Aligned_cols=93 Identities=13% Similarity=0.151 Sum_probs=57.9
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecCc--------cchHHHHHHHHHHHHH
Q 009313 203 FGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGM--------GCSAGVIGVDLARDML 274 (537)
Q Consensus 203 ~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~--------gCs~gl~AL~lA~~lL 274 (537)
..|++++|+++|++|+|||++-++ .......-...+.||+.++-..+|.+|- |++|....++++++|-
T Consensus 299 ~~A~~~al~~AGl~~~DID~iei~----dafa~~~l~~~e~lg~~~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL~ 374 (400)
T PRK13359 299 APATQKLLARLGMTLDQFDVIELN----EAFASQGLAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVTTALYQLE 374 (400)
T ss_pred HHHHHHHHHHhCCCHHHcCcCccC----cHhHHHHHHHHHHcCCCCCCCCEECCCchhhcCCchhHHHHHHHHHHHHHHh
Confidence 689999999999999999987622 1123334456677887433356666652 3445555566666664
Q ss_pred HcCCCCeEEEEEecccccccCCCCCcCCCccccccccceEEEEEec
Q 009313 275 QANPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSN 320 (537)
Q Consensus 275 ~~g~~~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~ 320 (537)
.. ..++.|+ +.|.-|..+.|+||++
T Consensus 375 ~~-~~~~g~~--------------------~~c~~gG~g~a~~ie~ 399 (400)
T PRK13359 375 RT-GGRFALC--------------------TMCIGVGQGIAIAIER 399 (400)
T ss_pred hc-CCCeEEE--------------------EEcccCCceeEEEEEe
Confidence 32 2344443 2355566677777764
No 149
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=87.86 E-value=2.6 Score=45.80 Aligned_cols=91 Identities=15% Similarity=0.155 Sum_probs=49.8
Q ss_pred HHHHHhhhhhhcccccccCCCCCCcCccccccEEEEcCCCH-HHHHHHH--HHcC--------------CChhhhhhhhh
Q 009313 402 WRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVHAASK-TVLDELQ--KNLE--------------LSEKNMEASRM 464 (537)
Q Consensus 402 ~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H~~g~-~vl~~l~--~~Lg--------------l~~e~~~~S~~ 464 (537)
.++++++ +|+++ +|||.+-+|-.-. ..+-.++ +.+| ++.+++.+|=-
T Consensus 313 ~~~al~~----------aGl~~------~did~~ei~daFa~~~l~~l~~le~lGf~~~G~g~~~~~G~~~~~pvN~~GG 376 (426)
T PRK08170 313 ATPLLQR----------HGLTL------EDLDLWEINEAFAAQVLACLAAWADEEYCREQLGLDGALGELDRERLNVDGG 376 (426)
T ss_pred HHHHHHH----------cCCCH------HHcCEEEecchhHHHHHHHHHHhccccchhcccccccccCCCCcceecCCCC
Confidence 5677876 89997 9999999997644 3332221 2222 33344543211
Q ss_pred ccccccccccchH---HHHHHHHHHcCCCCCCCE-EEEEEEchHHHhhheeEE
Q 009313 465 TLHRFGNTSSSSI---WYELAYLEAKERVKRGDR-VWQIAFGSGFKCNSVVWQ 513 (537)
Q Consensus 465 ~l~r~GNtsSaSi---~~~La~~~~~g~l~~Gd~-VlliafGsG~~~~s~v~r 513 (537)
.--+||...++= ...|.+.+++. .|.+ +.-++.|.|.. .+++++
T Consensus 377 -~la~GHP~GAtG~~~~~~l~~~l~~~---~~~~g~~~~c~~gg~g-~a~~~e 424 (426)
T PRK08170 377 -AIALGHPVGASGARIVLHLLHALKRR---GTKRGIAAICIGGGQG-GAMLLE 424 (426)
T ss_pred -HHHhCCCccCccHHHHHHHHHHHHhh---CCCeEEEEEecCCChh-heEEEE
Confidence 223788876665 66666655542 2333 33344455543 455554
No 150
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=87.81 E-value=0.8 Score=41.27 Aligned_cols=94 Identities=17% Similarity=0.159 Sum_probs=57.6
Q ss_pred HHHHHhhhhhhcccccccCCCCCCcCccccccEEEEcCCCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHH
Q 009313 402 WRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVHAASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYEL 481 (537)
Q Consensus 402 ~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H~~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~L 481 (537)
.++++++ +|+++ +|||.|=+|-.-....-...+.||++++++.++=-.+. +||...+|=...+
T Consensus 28 ~~~al~~----------ag~~~------~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~GG~la-~GHP~gasG~r~~ 90 (123)
T PF02803_consen 28 ARKALER----------AGLTP------DDIDVIEINEAFAAQVLAFLEALGLDPEKVNPNGGALA-LGHPLGASGARLV 90 (123)
T ss_dssp HHHHHHH----------HT--G------GGESEEEE--SBHHHHHHHHHHHTTGGGGBSTT--HHH-H-BHTTTHHHHHH
T ss_pred HHHHHHH----------hCCCc------cccchhhccchhhhHHHHhhccccccccccCccccccc-ccccccccccchh
Confidence 5778886 78987 99999999999988888899999999999976533343 7887666654444
Q ss_pred HHHHHcCCCCCCCEEEE-EEEchHHHhhheeEE
Q 009313 482 AYLEAKERVKRGDRVWQ-IAFGSGFKCNSVVWQ 513 (537)
Q Consensus 482 a~~~~~g~l~~Gd~Vll-iafGsG~~~~s~v~r 513 (537)
.++..+-+-+.|++.+. ++.|.|. -.+++++
T Consensus 91 ~~l~~~L~~~~~~~gla~~~~ggG~-g~a~lle 122 (123)
T PF02803_consen 91 VELAHQLRRRGGRYGLAAICAGGGQ-GSAVLLE 122 (123)
T ss_dssp HHHHHHHHHHTTSEEEEEEEETTTE-EEEEEEE
T ss_pred hhhHHHHHHhchhhhhHHhccccee-eEEEEEE
Confidence 44333211134566543 4445553 3445544
No 151
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=87.24 E-value=2.4 Score=45.79 Aligned_cols=69 Identities=10% Similarity=0.150 Sum_probs=44.4
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecCc--------cchHHHHHHHHHHHHH
Q 009313 203 FGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGM--------GCSAGVIGVDLARDML 274 (537)
Q Consensus 203 ~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~--------gCs~gl~AL~lA~~lL 274 (537)
..|++++|+++|++++|||++-++ ...+...-...+.||+.++-..+|.+|- |++|....++++++|-
T Consensus 300 ~~a~~~al~~Agl~~~DId~~ei~----D~f~~~~l~~~e~lg~~~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qLr 375 (401)
T PRK09050 300 APATRKLLARLGLTIDQFDVIELN----EAFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQLE 375 (401)
T ss_pred HHHHHHHHHHcCCCHHHCCccccC----cHhHHHHHHHHHHcCCCCCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHHH
Confidence 679999999999999999987622 1223334456678888433356666652 3444445556666654
Q ss_pred H
Q 009313 275 Q 275 (537)
Q Consensus 275 ~ 275 (537)
.
T Consensus 376 ~ 376 (401)
T PRK09050 376 R 376 (401)
T ss_pred h
Confidence 3
No 152
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=87.11 E-value=2.6 Score=41.54 Aligned_cols=77 Identities=16% Similarity=0.048 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCccHHHHHHHHcCCC---CCeeEEEecCccchHHHHHHHHHHHHHHc
Q 009313 201 VMFGALDELFEKTKVRPKDVGILVVN-CSIFNPTPSLSAMIINHYKMR---GNIISYNLGGMGCSAGVIGVDLARDMLQA 276 (537)
Q Consensus 201 l~~~Aa~~aL~~agi~~~dId~LI~~-ss~~~~~Ps~a~~I~~~lGl~---~~~~~~~l~g~gCs~gl~AL~lA~~lL~~ 276 (537)
...++++++|+++|++++|||.++.. +.................+.+ .....-.++..+++++...|..+...++.
T Consensus 146 ~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~ 225 (254)
T cd00327 146 GLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLEH 225 (254)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHhC
Confidence 35788999999999999999998755 332222222222222333331 01122344556777777777666665655
Q ss_pred C
Q 009313 277 N 277 (537)
Q Consensus 277 g 277 (537)
+
T Consensus 226 ~ 226 (254)
T cd00327 226 E 226 (254)
T ss_pred C
Confidence 4
No 153
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=86.87 E-value=1.7 Score=44.66 Aligned_cols=84 Identities=15% Similarity=0.266 Sum_probs=54.5
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEe---cCccchHHHHHHHHHHHH
Q 009313 197 EASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNL---GGMGCSAGVIGVDLARDM 273 (537)
Q Consensus 197 ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l---~g~gCs~gl~AL~lA~~l 273 (537)
.......++++++|+++|++++|||.++.... .+..-..+.+++|++++-...++ +.+++++-..+|..+
T Consensus 220 ~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lgl~~~~~~~~~~~~Gn~~sas~~~~L~~~--- 292 (320)
T cd00830 220 FAVRLMPESIEEALEKAGLTPDDIDWFVPHQA----NLRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALDEA--- 292 (320)
T ss_pred HHHHhhHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhhHHhhCcHHHHHHHHHHHHH---
Confidence 44556678999999999999999999885532 34555678999999643322222 334444444555433
Q ss_pred HHcC---CCCeEEEEEe
Q 009313 274 LQAN---PNNYAVVVST 287 (537)
Q Consensus 274 L~~g---~~~~aLVVs~ 287 (537)
++.+ +++++|+++.
T Consensus 293 ~~~~~~~~G~~vll~~~ 309 (320)
T cd00830 293 IEEGKLKKGDLVLLLGF 309 (320)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4444 4678887764
No 154
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=86.80 E-value=5.3 Score=43.72 Aligned_cols=68 Identities=16% Similarity=0.105 Sum_probs=47.8
Q ss_pred HHHHHHhhhhhhcccccccCCCCCCcCccccccEEEEcCCCHHHHHHHHHHcCCCh------------------hhhhhh
Q 009313 401 VWRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVHAASKTVLDELQKNLELSE------------------KNMEAS 462 (537)
Q Consensus 401 ~~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H~~g~~vl~~l~~~Lgl~~------------------e~~~~S 462 (537)
..++++++ +|+++ +|||.+=+|-.-....-...+.||+.+ ..+.+|
T Consensus 314 A~~~a~~~----------AGl~~------~DiD~~Ei~daFa~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~ 377 (438)
T PTZ00455 314 AAQKALSM----------AGVKP------SDLQVAEVHDCFTIAELLMYEALGIAEYGHAKDLIRNGATALEGRIPVNTG 377 (438)
T ss_pred HHHHHHHH----------cCCCH------HHCcEeeecccChHHHHHHHHHcCCCCCCchHHHHhcCCcccCCCceeeCC
Confidence 35677776 89987 999999999988777777789999987 345432
Q ss_pred hhccccccccccchHHHHHHHHH
Q 009313 463 RMTLHRFGNTSSSSIWYELAYLE 485 (537)
Q Consensus 463 ~~~l~r~GNtsSaSi~~~La~~~ 485 (537)
--+--+||...++-...+.++.
T Consensus 378 -GG~la~GHP~gAtG~~~v~e~~ 399 (438)
T PTZ00455 378 -GGLLSFGHPVGATGVKQIMEVY 399 (438)
T ss_pred -CchhhcCCCcchHHHHHHHHHH
Confidence 2233478887666555555443
No 155
>PRK04262 hypothetical protein; Provisional
Probab=86.34 E-value=1.8 Score=45.54 Aligned_cols=68 Identities=15% Similarity=0.258 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeE-----EEecCccchHHHHHHHHHH
Q 009313 200 MVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIIS-----YNLGGMGCSAGVIGVDLAR 271 (537)
Q Consensus 200 ~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~-----~~l~g~gCs~gl~AL~lA~ 271 (537)
....++++++|+++|++++|||.+++. ...+.+-..++++||++++-.. -..+.+++++-..+|..+.
T Consensus 209 ~~~~~~i~~~L~~~gl~~~dId~~v~H----q~n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~ 281 (347)
T PRK04262 209 KHIISAAKGLMEKLGLKPSDYDYAVFH----QPNGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVL 281 (347)
T ss_pred HHHHHHHHHHHHHhCcCHHHhceeecC----CCchHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHH
Confidence 346778999999999999999998854 2234456678999999743222 1455456666666665543
No 156
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=85.83 E-value=2.2 Score=44.34 Aligned_cols=81 Identities=14% Similarity=0.217 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEE---ecCccchHHHHHHHHHHHHHHc
Q 009313 200 MVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYN---LGGMGCSAGVIGVDLARDMLQA 276 (537)
Q Consensus 200 ~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~---l~g~gCs~gl~AL~lA~~lL~~ 276 (537)
...-.+++++|+++|++++|||.+++... .+.....+.++||++++-...+ .+.++|++-..+|..+ ++.
T Consensus 226 ~~~~~~i~~~L~~~g~~~~did~~~~hq~----~~~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L~~~---~~~ 298 (326)
T CHL00203 226 FQVPAVIIKCLNALNISIDEVDWFILHQA----NKRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLALDEA---IQN 298 (326)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHHHHH---HHh
Confidence 34566789999999999999999885432 2445667899999974332222 3334555555555444 444
Q ss_pred C---CCCeEEEEEe
Q 009313 277 N---PNNYAVVVST 287 (537)
Q Consensus 277 g---~~~~aLVVs~ 287 (537)
+ +++++|+++.
T Consensus 299 g~~~~Gd~vll~~~ 312 (326)
T CHL00203 299 NKIQPGQIIVLSGF 312 (326)
T ss_pred CCCCCCCEEEEEEE
Confidence 3 4567776663
No 157
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=85.66 E-value=2.4 Score=43.59 Aligned_cols=84 Identities=11% Similarity=0.145 Sum_probs=53.5
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEE---ecCccchHHHHHHHHHHHH
Q 009313 197 EASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYN---LGGMGCSAGVIGVDLARDM 273 (537)
Q Consensus 197 ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~---l~g~gCs~gl~AL~lA~~l 273 (537)
.......++++++|+++|++++|||.++... ..+..-.++.+++|++++-...+ .+.++|+.-+..|. ++
T Consensus 216 ~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~~a~~~~~L~---~~ 288 (319)
T PRK09352 216 FAVRELAKVAREALEAAGLTPEDIDWLVPHQ----ANLRIIDATAKKLGLPMEKVVVTVDKYGNTSAASIPLALD---EA 288 (319)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhhHHhhCCHHHHHHHHHHH---HH
Confidence 3344567789999999999999999998643 23455677899999974322222 33344445455553 44
Q ss_pred HHcC---CCCeEEEEEe
Q 009313 274 LQAN---PNNYAVVVST 287 (537)
Q Consensus 274 L~~g---~~~~aLVVs~ 287 (537)
++.+ +++++|+++.
T Consensus 289 ~~~g~~~~Gd~vll~s~ 305 (319)
T PRK09352 289 VRDGRIKRGDLVLLEGF 305 (319)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4443 3567776664
No 158
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=85.64 E-value=2.5 Score=45.60 Aligned_cols=69 Identities=12% Similarity=0.202 Sum_probs=45.4
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecCc--------cchHHHHHHHHHHHHH
Q 009313 203 FGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGM--------GCSAGVIGVDLARDML 274 (537)
Q Consensus 203 ~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~--------gCs~gl~AL~lA~~lL 274 (537)
..|++++|+++|++|+|||++-++ ...+...-...+.||+.++-..+|.+|- |++|....++++++|-
T Consensus 299 ~~a~~~al~~Agl~~~DID~~ei~----D~f~~~~l~~~e~lG~~~~~~pvN~~GG~la~GHp~gasG~~~~~e~~~qLr 374 (400)
T TIGR02430 299 VPATQKLLARAGLSIDQFDVIELN----EAFAAQALAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVLTALRQLE 374 (400)
T ss_pred HHHHHHHHHHhCCCHHHCCCcccC----cHHHHHHHHHHHHcCCCCCCCeECCCCchHhccChHHHHHHHHHHHHHHHHH
Confidence 678999999999999999987522 1233444556778898433356666652 3445555566666664
Q ss_pred H
Q 009313 275 Q 275 (537)
Q Consensus 275 ~ 275 (537)
.
T Consensus 375 ~ 375 (400)
T TIGR02430 375 R 375 (400)
T ss_pred h
Confidence 3
No 159
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=85.46 E-value=3.4 Score=44.13 Aligned_cols=82 Identities=9% Similarity=0.176 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEE---EecCccchHHHHHHHHHHHHH
Q 009313 198 ASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISY---NLGGMGCSAGVIGVDLARDML 274 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~---~l~g~gCs~gl~AL~lA~~lL 274 (537)
+......+++++|+++|++++|||.++.... .+.+-..++++||++++-... +.+.+++++-..+|+.+ +
T Consensus 278 ~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~----n~~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~~~L~~~---~ 350 (379)
T PLN02326 278 AVRCVPQVIESALQKAGLTAESIDWLLLHQA----NQRIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALDEA---V 350 (379)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHHHHHHHH---H
Confidence 3444567889999999999999999885432 234456799999997543222 34445555555666544 3
Q ss_pred HcC---CCCeEEEEE
Q 009313 275 QAN---PNNYAVVVS 286 (537)
Q Consensus 275 ~~g---~~~~aLVVs 286 (537)
+.+ +++++|+++
T Consensus 351 ~~g~~~~Gd~vll~~ 365 (379)
T PLN02326 351 RSGKVKKGDVIATAG 365 (379)
T ss_pred HcCCCCCCCEEEEEE
Confidence 433 456666665
No 160
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=85.13 E-value=3.9 Score=44.21 Aligned_cols=91 Identities=13% Similarity=0.194 Sum_probs=57.9
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecC--------ccchHHHHHHHHHHHHH
Q 009313 203 FGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGG--------MGCSAGVIGVDLARDML 274 (537)
Q Consensus 203 ~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g--------~gCs~gl~AL~lA~~lL 274 (537)
..|++++|+++|++++|||.+=++ ...+...-...+.||+.+ ..+|++| .|++|....+.++.+|-
T Consensus 303 ~~a~~~al~~AGl~~~DID~~ei~----daFa~~~l~~~e~lG~~~--~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~ 376 (402)
T PRK08242 303 VPATRKALAKAGLTVDDIDLFELN----EAFASVVLRFMQALDIPH--DKVNVNGGAIAMGHPLGATGAMILGTVLDELE 376 (402)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEec----chhhHHHHHHHHHhCCCC--cCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHH
Confidence 469999999999999999988643 123344445677888753 3455554 24555555566666654
Q ss_pred HcCCCCeEEEEEecccccccCCCCCcCCCccccccccceEEEEEec
Q 009313 275 QANPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSN 320 (537)
Q Consensus 275 ~~g~~~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~ 320 (537)
+.+ .++.|+ +.|.-|-.+.|+|+++
T Consensus 377 ~~~-~~~g~~--------------------~~c~ggG~g~a~~~e~ 401 (402)
T PRK08242 377 RRG-KRTALI--------------------TLCVGGGMGIATIIER 401 (402)
T ss_pred hcC-CCeEEE--------------------EEcccCCceeEEEEEe
Confidence 432 344433 3466677778888775
No 161
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=84.81 E-value=3.6 Score=44.17 Aligned_cols=74 Identities=19% Similarity=0.250 Sum_probs=50.3
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecC--------ccchHHHHHHHHHHHHH
Q 009313 203 FGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGG--------MGCSAGVIGVDLARDML 274 (537)
Q Consensus 203 ~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g--------~gCs~gl~AL~lA~~lL 274 (537)
..|++++++++|++++|||++=++ .......-.-.+.||+.++ .+|.+| .||+|....+.++.+|-
T Consensus 288 ~~A~~~al~~Agl~~~DiDv~Ei~----daFa~~~l~~le~lgl~g~--~vN~~GG~la~GHP~GatG~~~~~~l~~qL~ 361 (388)
T PRK06366 288 IPATRKLLEKQNKSIDYYDLVEHN----EAFSIASIIVRDQLKIDNE--RFNVNGGAVAIGHPIGNSGSRIIVTLINALK 361 (388)
T ss_pred HHHHHHHHHHcCCCHHHcceeecc----chhHHHHHHHHHHhCCCCC--ccCCCCchhhhCCCcCCCHHHHHHHHHHHHH
Confidence 689999999999999999987543 1123334455667777543 556554 36777778888888876
Q ss_pred HcCCCCeEE
Q 009313 275 QANPNNYAV 283 (537)
Q Consensus 275 ~~g~~~~aL 283 (537)
+.+ .++.|
T Consensus 362 ~~~-~~~g~ 369 (388)
T PRK06366 362 TRH-MKTGL 369 (388)
T ss_pred hcC-CCeEE
Confidence 543 34543
No 162
>PRK06840 hypothetical protein; Validated
Probab=84.62 E-value=3.7 Score=42.81 Aligned_cols=80 Identities=16% Similarity=0.248 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeE--EEecCccchHHHHHHHHHHHHHHcC-
Q 009313 201 VMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIIS--YNLGGMGCSAGVIGVDLARDMLQAN- 277 (537)
Q Consensus 201 l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~--~~l~g~gCs~gl~AL~lA~~lL~~g- 277 (537)
...++++++|+++|++++|||.++... ..+..-..++++||++++-.. -+.+.++|++-..+|. ++++++
T Consensus 238 ~~~~~i~~~L~~~gl~~~did~~~~h~----~~~~~~~~~~~~Lgl~~~~~~~~~~~Gn~~sas~~~~L~---~~~~~~~ 310 (339)
T PRK06840 238 NFLKVIREALRKSGYTPKDIDYLAILH----MKRSAHIALLEGLGLTEEQAIYLDEYGHLGQLDQILSLH---LALEQGK 310 (339)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECC----cCHHHHHHHHHHcCCCHHHeEeHHhccchhhhhHHHHHH---HHHHcCC
Confidence 456889999999999999999987432 224455678999999742211 1333344555555554 344443
Q ss_pred --CCCeEEEEEe
Q 009313 278 --PNNYAVVVST 287 (537)
Q Consensus 278 --~~~~aLVVs~ 287 (537)
+++++|+++.
T Consensus 311 ~~~Gd~ill~~~ 322 (339)
T PRK06840 311 LKDGDLVVLVSA 322 (339)
T ss_pred CCCCCEEEEEEE
Confidence 4566666653
No 163
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=84.11 E-value=5.5 Score=42.81 Aligned_cols=92 Identities=12% Similarity=0.143 Sum_probs=56.5
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecC--------ccchHHHHHHHHHHHH
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGG--------MGCSAGVIGVDLARDM 273 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g--------~gCs~gl~AL~lA~~l 273 (537)
...|++++|+++|++++|||++=++- ..+...-...+.||+.. ..+|.+| .||+|....++++++|
T Consensus 287 ~~~a~~~al~~agl~~~did~~ei~d----~F~~~~l~~~e~lg~~~--~pvN~~GG~la~Ghp~gatG~~~v~e~~~qL 360 (387)
T PRK07850 287 PVQATAKVLEKAGMKIGDIDLVEINE----AFASVVLSWAQVHEPDM--DKVNVNGGAIALGHPVGSTGARLITTALHEL 360 (387)
T ss_pred HHHHHHHHHHHcCCCHHHcCeeeecc----cchHHHHHHHHHcCCCC--CCcCCCCchhhcCCCcchhHHHHHHHHHHHH
Confidence 36899999999999999999886531 12233334446777753 3556554 2344555556666666
Q ss_pred HHcCCCCeEEEEEecccccccCCCCCcCCCccccccccceEEEEEec
Q 009313 274 LQANPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSN 320 (537)
Q Consensus 274 L~~g~~~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~ 320 (537)
-+. ..++.|+ +.|.-|..++|+||++
T Consensus 361 ~~~-~~~~g~~--------------------~~c~~gg~g~a~~~e~ 386 (387)
T PRK07850 361 ERT-DKSTALI--------------------TMCAGGALSTGTIIER 386 (387)
T ss_pred Hhc-CCCeEEE--------------------EEccccCceeEEEEEe
Confidence 543 2344433 3355667777777764
No 164
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=83.97 E-value=3.9 Score=44.11 Aligned_cols=92 Identities=14% Similarity=0.220 Sum_probs=55.3
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecC--------ccchHHHHHHHHHHHH
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGG--------MGCSAGVIGVDLARDM 273 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g--------~gCs~gl~AL~lA~~l 273 (537)
...|++++|+++|++++|||++-++ .......-...+.||+.+ ..+|.+| .|++|....+.++.+|
T Consensus 299 ~~~A~~~al~~Agi~~~did~~ei~----D~f~~~~l~~~e~lg~~~--~~vN~~GG~la~GHp~gasG~~~~~~~~~~L 372 (399)
T PRK09052 299 PIEAIPAALKQAGLKQDDLDWIELN----EAFAAQSLAVIRDLGLDP--SKVNPLGGAIALGHPLGATGAIRTATVVHGL 372 (399)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEeC----cHHHHHHHHHHHHhCCCC--cccCCCCchhhcCchHHHHHHHHHHHHHHHH
Confidence 4789999999999999999988622 112233344557788742 2334443 2455555666666665
Q ss_pred HHcCCCCeEEEEEecccccccCCCCCcCCCccccccccceEEEEEec
Q 009313 274 LQANPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSN 320 (537)
Q Consensus 274 L~~g~~~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~ 320 (537)
-..+ .++.|+ +.|.-|-.++|+||++
T Consensus 373 ~~~~-~~~g~~--------------------~~c~~gg~g~a~~~e~ 398 (399)
T PRK09052 373 RRTN-LKYGMV--------------------TMCVGTGMGAAGIFER 398 (399)
T ss_pred HhcC-CCeEEE--------------------EEcccCCceeEEEEEe
Confidence 4432 233332 3355566677777764
No 165
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=83.78 E-value=2.4 Score=44.79 Aligned_cols=87 Identities=9% Similarity=0.119 Sum_probs=51.3
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCccHHHHHHHHcCCCC-Ce----eEEEecCccchHHHHHHHHHHHHHH
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVN-CSIFNPTPSLSAMIINHYKMRG-NI----ISYNLGGMGCSAGVIGVDLARDMLQ 275 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~-ss~~~~~Ps~a~~I~~~lGl~~-~~----~~~~l~g~gCs~gl~AL~lA~~lL~ 275 (537)
..++++++|+++|++|+|||.++.. +...+.....+..+..-+|-.. .. +.-.++..+.++|...+..+...++
T Consensus 236 l~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~ 315 (348)
T PRK06147 236 LTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAASR 315 (348)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHHH
Confidence 4789999999999999999998854 3322211222333444454211 11 2222343455556666656666666
Q ss_pred cC--CCCeEEEEEec
Q 009313 276 AN--PNNYAVVVSTE 288 (537)
Q Consensus 276 ~g--~~~~aLVVs~E 288 (537)
.+ +..++||.++.
T Consensus 316 ~g~~~g~~~L~~s~~ 330 (348)
T PRK06147 316 KGYGPGPNVLCHLSD 330 (348)
T ss_pred cCcCCCCcEEEEecC
Confidence 66 46788888754
No 166
>PRK09051 beta-ketothiolase; Provisional
Probab=83.29 E-value=5.1 Score=43.16 Aligned_cols=68 Identities=13% Similarity=0.239 Sum_probs=44.0
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecCc--------cchHHHHHHHHHHHH
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGM--------GCSAGVIGVDLARDM 273 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~--------gCs~gl~AL~lA~~l 273 (537)
...|++++|+++|++|+|||++=++ ...+...-...+.||+.+ ..+|.+|- |++|....+.++++|
T Consensus 294 ~~~a~~~al~~agi~~~did~~ei~----d~f~~~~~~~~e~lg~~~--~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L 367 (394)
T PRK09051 294 PVPATQKALERAGLTVADLDVIEAN----EAFAAQACAVTRELGLDP--AKVNPNGSGISLGHPVGATGAIITVKALYEL 367 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEec----CccHHHHHHHHHHhCCCc--cccCCCccHHHhcchHHHHHHHHHHHHHHHH
Confidence 3689999999999999999988643 123444555678889852 46666652 333444444555554
Q ss_pred HH
Q 009313 274 LQ 275 (537)
Q Consensus 274 L~ 275 (537)
-+
T Consensus 368 ~~ 369 (394)
T PRK09051 368 QR 369 (394)
T ss_pred Hh
Confidence 43
No 167
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=82.33 E-value=1.9 Score=45.26 Aligned_cols=53 Identities=19% Similarity=0.235 Sum_probs=42.2
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCee
Q 009313 195 RLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNII 251 (537)
Q Consensus 195 ~~ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~ 251 (537)
-+++...+.++++++|+++|++++|||.+|. .+.-..+-..+++++|++++-.
T Consensus 218 fk~av~~~~~~~~~~L~~~~l~~~dId~~vp----HQan~ri~~~i~~~l~~~~~k~ 270 (323)
T COG0332 218 FKFAVRAMPKAIEEVLEKAGLTPEDIDWFVP----HQANLRIIEAIAKKLGIPEEKV 270 (323)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEcc----ccccHHHHHHHHHHcCCCHHHH
Confidence 3578888999999999999999999999983 3334456778999999965433
No 168
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=80.91 E-value=4.4 Score=43.04 Aligned_cols=86 Identities=13% Similarity=0.119 Sum_probs=54.0
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHH-cCCCC-Cee----EEEecCccchHHHHHHHH
Q 009313 196 LEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINH-YKMRG-NII----SYNLGGMGCSAGVIGVDL 269 (537)
Q Consensus 196 ~ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~-lGl~~-~~~----~~~l~g~gCs~gl~AL~l 269 (537)
+++...+.++++++|+++|++++|||.++..-.. ..+...+.++ ||+.. .-. --..+.++|++-..+|+.
T Consensus 267 ~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~~----~~~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~ 342 (372)
T PRK07515 267 KEVCPMVAEHIVEHLAENGLTPADVKRFWLHQAN----INMNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHK 342 (372)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHHH
Confidence 4566667899999999999999999998865221 1223334555 56431 111 123455677777777777
Q ss_pred HHHHHHcCCCCeEEEEEe
Q 009313 270 ARDMLQANPNNYAVVVST 287 (537)
Q Consensus 270 A~~lL~~g~~~~aLVVs~ 287 (537)
+..-+ .+++++|+++.
T Consensus 343 ~~~~~--~~Gd~vll~~~ 358 (372)
T PRK07515 343 HSDDL--AAGDLGVICSF 358 (372)
T ss_pred HhccC--CCCCEEEEEEe
Confidence 64432 34567776663
No 169
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=80.77 E-value=5 Score=36.19 Aligned_cols=75 Identities=17% Similarity=0.321 Sum_probs=48.1
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecC--------ccchHHHHHHHHHHHH
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGG--------MGCSAGVIGVDLARDM 273 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g--------~gCs~gl~AL~lA~~l 273 (537)
...|++++|+++|++++|||.+=++-. +....-...+.+|+.+ ..+|++| .||+|....+.++++|
T Consensus 24 p~~A~~~al~~ag~~~~did~~Ei~Ea----FA~~~l~~~~~lg~~~--~~vN~~GG~la~GHP~gasG~r~~~~l~~~L 97 (123)
T PF02803_consen 24 PVPAARKALERAGLTPDDIDVIEINEA----FAAQVLAFLEALGLDP--EKVNPNGGALALGHPLGASGARLVVELAHQL 97 (123)
T ss_dssp HHHHHHHHHHHHT--GGGESEEEE--S----BHHHHHHHHHHHTTGG--GGBSTT--HHHH-BHTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCccccchhhccch----hhhHHHHhhccccccc--cccCcccccccccccccccccchhhhhHHHH
Confidence 378999999999999999998865421 2333445666777753 4455554 3677888888888888
Q ss_pred HHcCCCCeEE
Q 009313 274 LQANPNNYAV 283 (537)
Q Consensus 274 L~~g~~~~aL 283 (537)
-+.+ .++.+
T Consensus 98 ~~~~-~~~gl 106 (123)
T PF02803_consen 98 RRRG-GRYGL 106 (123)
T ss_dssp HHHT-TSEEE
T ss_pred HHhc-hhhhh
Confidence 6654 34443
No 170
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=80.38 E-value=8.1 Score=41.18 Aligned_cols=74 Identities=14% Similarity=0.203 Sum_probs=49.5
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEec--------CccchHHHHHHHHHHHH
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLG--------GMGCSAGVIGVDLARDM 273 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~--------g~gCs~gl~AL~lA~~l 273 (537)
...|++++|+++|++++|||.+..+ ...........+.+|+.+ ..++.+ -.|++|......+..++
T Consensus 260 ~~~a~~~al~~Agl~~~Did~~ei~----eafa~~~~~~~e~lgl~~--~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql 333 (361)
T PRK06690 260 PIFAVNKLLNEMNMKVEDIDYFEIN----EAFASKVVACAKELQIPY--EKLNVNGGAIALGHPYGASGAMLVTRLFYQA 333 (361)
T ss_pred HHHHHHHHHHHcCCCHHHcCEeeec----chhHHHHHHHHHhcCCCc--hhcccCCcHHhccCchhhhHHHHHHHHHHHH
Confidence 5789999999999999999998653 122334445667788753 334443 14677777777777777
Q ss_pred HHcCCCCeE
Q 009313 274 LQANPNNYA 282 (537)
Q Consensus 274 L~~g~~~~a 282 (537)
-+.+ .++.
T Consensus 334 ~~~~-~~~g 341 (361)
T PRK06690 334 KRED-MKYG 341 (361)
T ss_pred HHhC-CCEE
Confidence 6543 3443
No 171
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=80.13 E-value=6.5 Score=42.44 Aligned_cols=94 Identities=14% Similarity=0.250 Sum_probs=54.5
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCC-eeEEEecC--------ccchHHHHHHHHHHH
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGN-IISYNLGG--------MGCSAGVIGVDLARD 272 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~-~~~~~l~g--------~gCs~gl~AL~lA~~ 272 (537)
...|++++|+++|++|+|||++-++- ..+...-...+.||+.++ ...+|.+| .|++|....+.++++
T Consensus 300 ~~~a~~~al~~Agl~~~Did~~ei~d----~f~~~~l~~~e~lg~~~~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~q 375 (404)
T PRK06205 300 PVPATEKALARAGLTLDDIDLIELNE----AFAAQVLAVLKEWGFGADDEERLNVNGSGISLGHPVGATGGRILATLLRE 375 (404)
T ss_pred HHHHHHHHHHHcCCCHHHCCEeeecc----HHHHHHHHHHHHhCcCcccCCCcCCCCCHHhhCCChhhhHHHHHHHHHHH
Confidence 36899999999999999999876331 122333344566776431 01355554 133444444555555
Q ss_pred HHHcCCCCeEEEEEecccccccCCCCCcCCCccccccccceEEEEEec
Q 009313 273 MLQANPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSN 320 (537)
Q Consensus 273 lL~~g~~~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~ 320 (537)
|-..+ .++.| .+.|.-|..+.|+|+++
T Consensus 376 L~~~~-~~~gl--------------------~~~c~~gg~g~a~~~e~ 402 (404)
T PRK06205 376 LQRRQ-ARYGL--------------------ETMCIGGGQGLAAVFER 402 (404)
T ss_pred HHhcC-CCeEE--------------------EEEeccCChhhEEEEEe
Confidence 54321 23333 33466677777888775
No 172
>PLN02287 3-ketoacyl-CoA thiolase
Probab=80.00 E-value=7.3 Score=42.84 Aligned_cols=96 Identities=13% Similarity=0.161 Sum_probs=59.7
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecC--------ccchHHHHHHHHHHHH
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGG--------MGCSAGVIGVDLARDM 273 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g--------~gCs~gl~AL~lA~~l 273 (537)
...|++++|+++|++|+|||++=++ .......-.-.+.||+.+ ..+|++| .|++|....+.++.+|
T Consensus 333 ~~~A~~~al~~Agl~~~DID~~Ei~----daFa~~~l~~~e~lG~~~--~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL 406 (452)
T PLN02287 333 PAVAIPAAVKAAGLELDDIDLFEIN----EAFASQFVYCCKKLGLDP--EKVNVNGGAIALGHPLGATGARCVATLLHEM 406 (452)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEec----chHHHHHHHHHHHcCCCc--cccCCCCcHHhccCcHHHHHHHHHHHHHHHH
Confidence 4689999999999999999998433 111222223446677742 3444443 3566666666666666
Q ss_pred HHcCC-CCeEEEEEecccccccCCCCCcCCCccccccccceEEEEEeccCc
Q 009313 274 LQANP-NNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSNRRR 323 (537)
Q Consensus 274 L~~g~-~~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~~~~ 323 (537)
-+.+. .++.| .+.|.-|--+.|+||++.+.
T Consensus 407 ~~~~~~~~~gl--------------------~~~c~ggG~g~a~~ie~~~~ 437 (452)
T PLN02287 407 KRRGKDCRFGV--------------------VSMCIGTGMGAAAVFERGDS 437 (452)
T ss_pred HhcCCCCCeeE--------------------EEEccccCceeEEEEEecCc
Confidence 54331 13332 23466777788899988664
No 173
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=79.93 E-value=5.2 Score=43.07 Aligned_cols=92 Identities=18% Similarity=0.336 Sum_probs=55.5
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecC--------ccchHHHHHHHHHHHH
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGG--------MGCSAGVIGVDLARDM 273 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g--------~gCs~gl~AL~lA~~l 273 (537)
...|++++|+++|++++|||.+-++ ...+...-.-.+.||+.+ ..+|++| .|++|....+.++.+|
T Consensus 291 ~~~a~~~al~~agl~~~did~~ei~----d~f~~~~l~~~e~lg~~~--~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL 364 (391)
T PRK07661 291 PIAAIPKALKLAGLELSDIGLFELN----EAFASQSIQVIRELGLDE--EKVNVNGGAIALGHPLGCTGAKLTLSLIHEM 364 (391)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeC----CHHHHHHHHHHHHcCCCC--CCCCCCCChHHhCCcHHHHHHHHHHHHHHHH
Confidence 4789999999999999999998733 112222333345677642 2334433 3566666666777776
Q ss_pred HHcCCCCeEEEEEecccccccCCCCCcCCCccccccccceEEEEEec
Q 009313 274 LQANPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSN 320 (537)
Q Consensus 274 L~~g~~~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~ 320 (537)
-+.+ .++.|+ +.|.-|..+.|+|+++
T Consensus 365 ~~~~-~~~g~~--------------------~~c~~gg~g~a~~~e~ 390 (391)
T PRK07661 365 KRRN-EQFGIV--------------------TMCIGGGMGAAGVFEL 390 (391)
T ss_pred HhcC-CCeEEE--------------------EEccccChhhEEEEEe
Confidence 6543 234332 3355566666777764
No 174
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=78.67 E-value=5.9 Score=42.62 Aligned_cols=67 Identities=21% Similarity=0.260 Sum_probs=46.0
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecC--------ccchHHHHHHHHHHHH
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGG--------MGCSAGVIGVDLARDM 273 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g--------~gCs~gl~AL~lA~~l 273 (537)
...|++++|+++|++++|||.+=++- ..+...-...+.||+.+ ..+|.+| .||+|....++++++|
T Consensus 294 ~~~a~~~al~~Agl~~~dId~~e~~d----~f~~~~l~~~e~lg~~~--~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL 367 (394)
T PRK06445 294 PVPASKKALEKAGLSVKDIDLWEINE----AFAVVVLYAIKELGLDP--ETVNIKGGAIAIGHPLGATGARIVGTLARQL 367 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecc----cchHHHHHHHHHhCCCc--cccCCCCCHHHcCCCccchHHHHHHHHHHHH
Confidence 47799999999999999999885432 23344455667777753 2355543 3667777777777777
Q ss_pred H
Q 009313 274 L 274 (537)
Q Consensus 274 L 274 (537)
-
T Consensus 368 ~ 368 (394)
T PRK06445 368 Q 368 (394)
T ss_pred H
Confidence 5
No 175
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=77.64 E-value=16 Score=39.76 Aligned_cols=94 Identities=15% Similarity=0.104 Sum_probs=48.3
Q ss_pred HHHHHhhhhhhcccccccCCCCCCcCccccccEEEEcCCCHHH-HHHH--HHHcCC--------------Chhhhhhhhh
Q 009313 402 WRHLFSGSADKSRSSSLASTKPYIPDYKLAFEHFCVHAASKTV-LDEL--QKNLEL--------------SEKNMEASRM 464 (537)
Q Consensus 402 ~r~vl~~a~~~~~~~~~~gl~~y~pdf~~did~~~~H~~g~~v-l~~l--~~~Lgl--------------~~e~~~~S~~ 464 (537)
.++++++ +|+++ +|||.+=+|-.-... +-.+ .+.+|+ +..++.+|=-
T Consensus 315 ~~~a~~~----------AGl~~------~Did~~Ei~d~Fa~~~l~~l~~~e~lG~~~~g~g~~~~~G~~~~~pvN~~GG 378 (427)
T PRK09268 315 VPRLLAR----------NGLTL------QDFDFYEIHEAFASQVLATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVNGS 378 (427)
T ss_pred HHHHHHH----------cCCCH------HHCCEEEeccccHHHHHHHHHHhhhccccccccccccccCcCCCcccCCCcC
Confidence 4677776 89987 999999999765433 2222 133333 2223322111
Q ss_pred ccccccccccchHHHHHHHHHHcCCCCCCCEEEE-EEEchHHHhhheeEE
Q 009313 465 TLHRFGNTSSSSIWYELAYLEAKERVKRGDRVWQ-IAFGSGFKCNSVVWQ 513 (537)
Q Consensus 465 ~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd~Vll-iafGsG~~~~s~v~r 513 (537)
.--+||...++=...+.++..+=+-+.|.+.+. ++.|.|. -.+++|+
T Consensus 379 -~la~GhP~gATG~~~v~e~~~QL~~~~~~~gl~~~c~~gG~-g~a~~~e 426 (427)
T PRK09268 379 -SLAAGHPFAATGGRIVATLAKLLAEKGSGRGLISICAAGGQ-GVTAILE 426 (427)
T ss_pred -HHhcCCCcccchHHHHHHHHHHHHhcCCCEEEEEEcccCch-heEEEEe
Confidence 122788876665555555444322234555443 3334443 3445543
No 176
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=76.29 E-value=5.9 Score=42.82 Aligned_cols=92 Identities=11% Similarity=0.185 Sum_probs=54.2
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecC--------ccchHHHHHHHHHHHH
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGG--------MGCSAGVIGVDLARDM 273 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g--------~gCs~gl~AL~lA~~l 273 (537)
...|++++++++|++++|||++=.. ...+...-+-.+.||+.+ ..+|.+| .||++....+.+.++|
T Consensus 305 ~~~a~~~al~~Agi~~~did~~ei~----d~f~~~~l~~le~lg~~~--~pvN~~GG~l~~Ghp~gasg~~~~~~~~~qL 378 (406)
T PRK07851 305 PVEASKQALARAGMSIDDIDLVEIN----EAFAAQVLPSARELGIDE--DKLNVSGGAIALGHPFGMTGARITTTLLNNL 378 (406)
T ss_pred HHHHHHHHHHHhCCCHHHCCeehhh----hHHHHHHHHHHHHhCCCc--cccCCCCChHhhcCcHHHHHHHHHHHHHHHH
Confidence 3689999999999999999988321 112222333446777642 1333332 2555556666666666
Q ss_pred HHcCCCCeEEEEEecccccccCCCCCcCCCccccccccceEEEEEec
Q 009313 274 LQANPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSN 320 (537)
Q Consensus 274 L~~g~~~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~ 320 (537)
-+ .+.++.|+ +.|.-|..++|+||++
T Consensus 379 ~~-~~~~~g~~--------------------~~~~~gg~g~a~~~e~ 404 (406)
T PRK07851 379 QT-HDKTFGLE--------------------TMCVGGGQGMAMVLER 404 (406)
T ss_pred Hh-cCCCeEEE--------------------EEccccChhhEEEEEe
Confidence 44 22344332 3356677777777775
No 177
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=76.22 E-value=9.7 Score=40.98 Aligned_cols=67 Identities=21% Similarity=0.270 Sum_probs=43.9
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecC--------ccchHHHHHHHHHHHHH
Q 009313 203 FGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGG--------MGCSAGVIGVDLARDML 274 (537)
Q Consensus 203 ~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g--------~gCs~gl~AL~lA~~lL 274 (537)
..|++++|+++|++|+|||++-++ ...+...-...+.||+.+ ..+|++| .||+|....+.++++|-
T Consensus 294 ~~a~~~al~~agl~~~did~~e~~----d~f~~~~l~~~e~lg~~~--~pvN~~GG~la~Ghp~gasG~~~~~~l~~qL~ 367 (393)
T PRK08235 294 GYAINALLEKTGKTVEDIDLFEIN----EAFAAVALASTEIAGIDP--EKVNVNGGAVALGHPIGASGARIIVTLIHELK 367 (393)
T ss_pred HHHHHHHHHHhCCCHHHCCeehhc----chhHHHHHHHHHHhCCCc--ccCCcCCchHHhCCcHHHHHHHHHHHHHHHHH
Confidence 579999999999999999988521 223333445667788742 3444443 25566666666776665
Q ss_pred H
Q 009313 275 Q 275 (537)
Q Consensus 275 ~ 275 (537)
.
T Consensus 368 ~ 368 (393)
T PRK08235 368 R 368 (393)
T ss_pred h
Confidence 3
No 178
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=75.81 E-value=4 Score=43.96 Aligned_cols=91 Identities=20% Similarity=0.278 Sum_probs=52.6
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecC--------ccchHHHHHHHHHHHHH
Q 009313 203 FGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGG--------MGCSAGVIGVDLARDML 274 (537)
Q Consensus 203 ~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g--------~gCs~gl~AL~lA~~lL 274 (537)
..|++++|+++|++|+|||++=++ .......-.-.+.||+.+ ..+|++| .|++|....+.++.+|-
T Consensus 298 ~~a~~~al~~agl~~~Did~~ei~----d~fa~~~l~~~e~lg~~~--~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL~ 371 (397)
T PRK06954 298 VGAIRKLFEKNGWRAAEVDLFEIN----EAFAVVTMAAMKEHGLPH--EKVNVNGGACALGHPIGASGARILVTLIGALR 371 (397)
T ss_pred HHHHHHHHHHcCCCHHHCCEEehh----hHHHHHHHHHHHHhCCCc--ccCCcCCChHHhcccHHHHHHHHHHHHHHHHH
Confidence 679999999999999999988422 111112222336678752 3455554 24455555555555554
Q ss_pred HcCCCCeEEEEEecccccccCCCCCcCCCccccccccceEEEEEec
Q 009313 275 QANPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSN 320 (537)
Q Consensus 275 ~~g~~~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~ 320 (537)
..+ .++. +.+.|.-|..++|+||++
T Consensus 372 ~~~-g~~~--------------------v~~~c~~gg~g~a~~~e~ 396 (397)
T PRK06954 372 ARG-GKRG--------------------VASLCIGGGEATAMGIEL 396 (397)
T ss_pred hcC-CCeE--------------------EEEEccccchhhEEEEEe
Confidence 322 2332 223466666777777763
No 179
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=75.37 E-value=9.6 Score=37.75 Aligned_cols=56 Identities=14% Similarity=0.156 Sum_probs=42.9
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCc-cHHHHHHHHcCCCCCeeEEEecC
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVNCSIFNPTP-SLSAMIINHYKMRGNIISYNLGG 257 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~P-s~a~~I~~~lGl~~~~~~~~l~g 257 (537)
...+++++|.++|++..|+|.++|++.|+..+- -+..-+++-|.+.-+++.+.++.
T Consensus 41 l~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGlRIG~~~AkgLA~~l~iplvgvss 97 (220)
T COG1214 41 LMPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGLRIGVAFAKGLALALNIPLVGVSS 97 (220)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEccCCCcccchhhHHHHHHHHHHHcCCCEEEeCH
Confidence 467889999999999999999999999876554 23444555565555678888883
No 180
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=75.17 E-value=8.3 Score=42.93 Aligned_cols=79 Identities=14% Similarity=0.111 Sum_probs=49.1
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCC-eeEEEecCccch--------HHHHHHHHHHHH
Q 009313 203 FGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGN-IISYNLGGMGCS--------AGVIGVDLARDM 273 (537)
Q Consensus 203 ~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~-~~~~~l~g~gCs--------~gl~AL~lA~~l 273 (537)
..|++++++++|++++|||++=+.. ..|...-+-.+.||+.++ -..++++| |.- .++..+--+...
T Consensus 295 ~~aa~~a~~~AGi~~~Did~~elyd----cF~~~~~~~~E~LGl~~~g~~pvN~sG-Gl~s~G~P~~a~g~~~i~E~v~Q 369 (498)
T PRK08257 295 RAAGRRALALAGLGIDDIDAFDLYS----CFPSAVQVAARELGLDLDDPRPLTVTG-GLPFFGGPGNNYVTHAIAEMVER 369 (498)
T ss_pred HHHHHHHHHHhCCCHHHCCEEEecc----CCHHHHHHHHHHcCcCCCCCCCcCCCc-ChhhcCCchhhHHHHHHHHHHHH
Confidence 4699999999999999999884321 134444556688888533 23566654 433 245555544455
Q ss_pred HHcCCCCeEEEEE
Q 009313 274 LQANPNNYAVVVS 286 (537)
Q Consensus 274 L~~g~~~~aLVVs 286 (537)
|+..+.+++||.+
T Consensus 370 LRg~~~~~gLv~~ 382 (498)
T PRK08257 370 LRANPGRRGLVTA 382 (498)
T ss_pred HhhcCCCEEEEEC
Confidence 5544456666543
No 181
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=74.98 E-value=11 Score=40.30 Aligned_cols=41 Identities=7% Similarity=0.238 Sum_probs=29.0
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCC
Q 009313 203 FGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMR 247 (537)
Q Consensus 203 ~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~ 247 (537)
..|++++++++|++|+|||.+-.. ...+...-+..+.||+.
T Consensus 288 ~~a~~~a~~~Agi~~~did~~e~~----d~f~~~~~~~~e~lg~~ 328 (386)
T cd00751 288 VPAIPKALKRAGLTLDDIDLIEIN----EAFAAQALACLKELGLD 328 (386)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEee----chhHHHHHHHHHHhCCC
Confidence 589999999999999999987643 11122334455678874
No 182
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=73.02 E-value=15 Score=39.56 Aligned_cols=92 Identities=14% Similarity=0.156 Sum_probs=54.0
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecC--------ccchHHHHHHHHHHHH
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGG--------MGCSAGVIGVDLARDM 273 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g--------~gCs~gl~AL~lA~~l 273 (537)
...|++++|+++|++|+|||.+-++- ..+...-...+.||+.. ..+|++| .|++|....+.++.++
T Consensus 293 ~~~a~~~al~~agl~~~dId~~e~~d----~f~~~~~~~~e~lg~~~--~~vn~~Gg~~a~GHp~gAsG~~~~~~l~~~l 366 (393)
T PRK05656 293 PVSATRRCLDKAGWSLAELDLIEANE----AFAAQSLAVGKELGWDA--AKVNVNGGAIALGHPIGASGCRVLVTLLHEM 366 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecC----ccHHHHHHHHHHhCCCC--ccCCcCCCHHHhCccHHHHHHHHHHHHHHHH
Confidence 36899999999999999999987531 13344445667788742 2344443 1333333444444433
Q ss_pred HHcCCCCeEEEEEecccccccCCCCCcCCCccccccccceEEEEEec
Q 009313 274 LQANPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSN 320 (537)
Q Consensus 274 L~~g~~~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~ 320 (537)
=.. ..++.| .+.|.-|-.++|+||++
T Consensus 367 ~~~-~~~~gl--------------------~~~c~~gG~g~a~~~e~ 392 (393)
T PRK05656 367 IRR-DAKKGL--------------------ATLCIGGGQGVALAIER 392 (393)
T ss_pred HHc-CCCEEE--------------------EEEcccCcceEEEEEec
Confidence 221 123333 33466666678888876
No 183
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=72.28 E-value=7.8 Score=40.86 Aligned_cols=87 Identities=7% Similarity=0.024 Sum_probs=56.0
Q ss_pred hHHHHHHHHHHHHHHhC--CCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCe------eEEEecCccchHHHHHHH
Q 009313 197 EASMVMFGALDELFEKT--KVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNI------ISYNLGGMGCSAGVIGVD 268 (537)
Q Consensus 197 ea~~l~~~Aa~~aL~~a--gi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~------~~~~l~g~gCs~gl~AL~ 268 (537)
.+.....++++++|+++ |++++|||.+++... ...+-..+.+++|++++- ..-+.+.+++++-..+|.
T Consensus 256 ~~~~~~~~~i~~~L~~~~~g~~~~did~~~~H~~----~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~ 331 (361)
T cd00831 256 LVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPG----GRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLA 331 (361)
T ss_pred HHHHHHHHHHHHHhccccCCCccccceEEEECCC----ChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHH
Confidence 44556677899999999 999999999886543 223445688899986432 122455566667777776
Q ss_pred HHHHHHHcCCCCeEEEEEe
Q 009313 269 LARDMLQANPNNYAVVVST 287 (537)
Q Consensus 269 lA~~lL~~g~~~~aLVVs~ 287 (537)
.+.+-=+..+++++|+++.
T Consensus 332 ~~~~~g~~~~Gd~vll~~~ 350 (361)
T cd00831 332 YMEAKGRVKRGDRGLLIAF 350 (361)
T ss_pred HHHHhCCCCCCCEEEEEEE
Confidence 5533211124567776663
No 184
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=71.05 E-value=10 Score=40.68 Aligned_cols=49 Identities=14% Similarity=0.266 Sum_probs=31.9
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecC
Q 009313 203 FGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGG 257 (537)
Q Consensus 203 ~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g 257 (537)
..|++++++++|++|+|||.+-+. ...+...-+..+.||+. ...+|.+|
T Consensus 289 ~~a~~~a~~~Agi~~~did~~e~~----d~fa~~~~~~~e~lG~~--~~pvn~~G 337 (386)
T TIGR01930 289 VPAIPKALKKAGLSISDIDLFEIN----EAFAAQVLACIKELGLD--LEKVNVNG 337 (386)
T ss_pred HHHHHHHHHHcCCCHHHCCeeehc----chhHHHHHHHHHHhCCC--hhhcCCCC
Confidence 589999999999999999988432 11122233445778874 13455554
No 185
>PLN03169 chalcone synthase family protein; Provisional
Probab=70.89 E-value=12 Score=40.29 Aligned_cols=87 Identities=13% Similarity=0.186 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeE------EEecCccchHHHHHHHHHH
Q 009313 198 ASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIIS------YNLGGMGCSAGVIGVDLAR 271 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~------~~l~g~gCs~gl~AL~lA~ 271 (537)
+....-.+++++|+++|++++|||.+.+...+.+ ..+-..++++||++++-.. -+.+.+++++-..+|+.+.
T Consensus 279 ~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~n--~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~~ 356 (391)
T PLN03169 279 IEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPGG--PAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMR 356 (391)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCcceEEecCCC--HHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHHH
Confidence 4444566779999999999999984433323222 5567789999999754321 2556577777777776554
Q ss_pred HH--HH-cCCCCeEEEEE
Q 009313 272 DM--LQ-ANPNNYAVVVS 286 (537)
Q Consensus 272 ~l--L~-~g~~~~aLVVs 286 (537)
.- ++ ..+++++|.++
T Consensus 357 ~~~~~~~~~~gd~~ll~a 374 (391)
T PLN03169 357 EELKKKGEEDEEWGLILA 374 (391)
T ss_pred HhhcccCCCCCcEEEEEE
Confidence 22 11 11345666555
No 186
>PRK06059 lipid-transfer protein; Provisional
Probab=70.22 E-value=21 Score=38.29 Aligned_cols=24 Identities=21% Similarity=0.369 Sum_probs=20.9
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEe
Q 009313 203 FGALDELFEKTKVRPKDVGILVVN 226 (537)
Q Consensus 203 ~~Aa~~aL~~agi~~~dId~LI~~ 226 (537)
..|++++++++|++++|||++=+.
T Consensus 276 ~~a~~~a~~~agl~~~Did~~El~ 299 (399)
T PRK06059 276 DQILDAAYAEAGIGPEDLSLAEVY 299 (399)
T ss_pred HHHHHHHHHHcCCCHHHCcEEeec
Confidence 578999999999999999988543
No 187
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=69.24 E-value=7.3 Score=38.28 Aligned_cols=42 Identities=29% Similarity=0.356 Sum_probs=29.9
Q ss_pred ccccccchHHHHHHHHHHcCCCCCCCEEEEEEEchHHHhhhe
Q 009313 469 FGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCNSV 510 (537)
Q Consensus 469 ~GNtsSaSi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~ 510 (537)
.|+-.+.|.|...+.+++.=.+++||+|+=+|.|+|+..+.+
T Consensus 49 i~~~~~is~P~~~a~~l~~L~l~pg~~VLeIGtGsGY~aAll 90 (209)
T PF01135_consen 49 IGCGQTISAPSMVARMLEALDLKPGDRVLEIGTGSGYQAALL 90 (209)
T ss_dssp EETTEEE--HHHHHHHHHHTTC-TT-EEEEES-TTSHHHHHH
T ss_pred ecceeechHHHHHHHHHHHHhcCCCCEEEEecCCCcHHHHHH
Confidence 455577788888888888777999999999999999876543
No 188
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=69.10 E-value=16 Score=38.61 Aligned_cols=43 Identities=7% Similarity=0.054 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCC
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRG 248 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~ 248 (537)
...|++++|+++|++++|||++=++. ..+...-...+.||+.+
T Consensus 253 ~~~a~~~al~~Agl~~~did~~ei~d----~F~~~~l~~~e~lGl~~ 295 (375)
T cd00829 253 ARLAARRAYKMAGITPDDIDVAELYD----CFTIAELLALEDLGFCE 295 (375)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecC----cChHHHHHHHHHcCCCC
Confidence 46899999999999999999885442 12334445566677653
No 189
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=68.77 E-value=20 Score=38.43 Aligned_cols=95 Identities=17% Similarity=0.235 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCC-----CCeeEE-EecCccchHHHHHHHHHH
Q 009313 198 ASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMR-----GNIISY-NLGGMGCSAGVIGVDLAR 271 (537)
Q Consensus 198 a~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~-----~~~~~~-~l~g~gCs~gl~AL~lA~ 271 (537)
-..-...|+++.+++.|.+++|.|.+++.. |.|-+...+++.+|.+ +..... .++.+.|.+...+| |.
T Consensus 207 Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~----P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~L--as 280 (377)
T COG3425 207 YFKHVENAAKGYMEKTGLSPDDFDYIVFHQ----PNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGL--AS 280 (377)
T ss_pred HHHHHHHHHHHHHHHhCCChhhhCeEEecC----CCCchHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHH--HH
Confidence 344568899999999999999999998653 3455566667776665 333333 57777888877555 44
Q ss_pred HHHHcC-CCCeEEEEEecccccccCCCCCcCCCccccccccceEEEEEec
Q 009313 272 DMLQAN-PNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAILMSN 320 (537)
Q Consensus 272 ~lL~~g-~~~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAvLLs~ 320 (537)
-|=++. +++++|+++ ||.||++-..|-
T Consensus 281 ~L~~a~~~G~rIl~~S----------------------YGSGa~s~~fs~ 308 (377)
T COG3425 281 LLDNAKLPGDRILLFS----------------------YGSGAGSEAFSI 308 (377)
T ss_pred HHhhcCCCCCEEEEEe----------------------eCCCcceeEEEE
Confidence 443444 456666554 678888876663
No 190
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=68.22 E-value=14 Score=38.90 Aligned_cols=90 Identities=12% Similarity=0.051 Sum_probs=54.9
Q ss_pred hhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCc-cHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHH
Q 009313 194 GRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTP-SLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARD 272 (537)
Q Consensus 194 ~~~ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~P-s~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~ 272 (537)
+|...+.+ ...++++|+++|++.+|||++-++..|+-.-+ ......++.|-+.-+.+-+.|+ -|-|=+.+-.+...
T Consensus 47 sr~H~e~i-~~li~~al~eA~~~~~dID~IA~T~gPGL~gaL~VG~~~Ak~LA~a~~kPli~Vn--H~~gHi~a~~l~~~ 123 (342)
T COG0533 47 SRHHVENI-PPLIEEALAEAGVSLEDIDAIAVTAGPGLGGALLVGATAAKALALALNKPLIPVN--HLEGHIEAARLETG 123 (342)
T ss_pred HHHHHHHH-HHHHHHHHHHcCCCcccCCEEEEecCCCchhHHHHHHHHHHHHHHHhCCCEeecc--hHHHHHHHHHhccC
Confidence 55555554 67889999999999999999998887764222 1133344444433345677777 56555444333222
Q ss_pred HHHcCCCCeEEEEEecc
Q 009313 273 MLQANPNNYAVVVSTEM 289 (537)
Q Consensus 273 lL~~g~~~~aLVVs~E~ 289 (537)
. ...--+|+||+=.
T Consensus 124 ~---~~p~v~LlVSGGH 137 (342)
T COG0533 124 L---AFPPVALLVSGGH 137 (342)
T ss_pred C---CCCcEEEEEecCc
Confidence 1 1234577777655
No 191
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=66.54 E-value=13 Score=40.08 Aligned_cols=68 Identities=12% Similarity=0.104 Sum_probs=40.3
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecC--------ccchHHHHHHHHHHHH
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGG--------MGCSAGVIGVDLARDM 273 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g--------~gCs~gl~AL~lA~~l 273 (537)
...|++++|+++|++|+|||++-++ .......-...+.||+.+ ..+|++| .|++|....+.+++.|
T Consensus 292 ~~~a~~~al~~agl~~~Did~~ei~----eafa~~~l~~~e~lg~~~--~~vN~~GG~~a~GHp~gatG~r~~~~l~~~l 365 (392)
T PRK07108 292 PVFAVPKLLKQAGLKVDDIDLWELN----EAFAVQVLYCRDTLGIPM--DRLNVNGGAIAVGHPYGVSGARLTGHALIEG 365 (392)
T ss_pred HHHHHHHHHHHcCCCHHHcCchHhh----hHHHHHHHHHHHhcCCCc--cccCCCCChHHhCcchhhhHHHHHHHHHHHH
Confidence 3689999999999999999987422 001111122345667642 3445554 2445555566666666
Q ss_pred HH
Q 009313 274 LQ 275 (537)
Q Consensus 274 L~ 275 (537)
-+
T Consensus 366 ~~ 367 (392)
T PRK07108 366 KR 367 (392)
T ss_pred Hh
Confidence 44
No 192
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=66.52 E-value=2.1 Score=37.88 Aligned_cols=75 Identities=12% Similarity=0.162 Sum_probs=44.0
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCccHHHHHHHHcCCCC---CeeEE----EecCccchHHHHHHHHHHHHH
Q 009313 203 FGALDELFEKTKVRPKDVGILVVN-CSIFNPTPSLSAMIINHYKMRG---NIISY----NLGGMGCSAGVIGVDLARDML 274 (537)
Q Consensus 203 ~~Aa~~aL~~agi~~~dId~LI~~-ss~~~~~Ps~a~~I~~~lGl~~---~~~~~----~l~g~gCs~gl~AL~lA~~lL 274 (537)
.++++++|+++|++|+|||.|... +......+.-+.-+.+-|+-.. .++.- .++....++|+..|-.+-..+
T Consensus 28 ~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~l~l 107 (119)
T PF02801_consen 28 ARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAKALLAL 107 (119)
T ss_dssp HHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHHHHHHH
Confidence 788999999999999999988754 3322112333445555555321 12222 233346777787777777777
Q ss_pred HcC
Q 009313 275 QAN 277 (537)
Q Consensus 275 ~~g 277 (537)
+.+
T Consensus 108 ~~~ 110 (119)
T PF02801_consen 108 EHG 110 (119)
T ss_dssp HHT
T ss_pred hcC
Confidence 655
No 193
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=66.42 E-value=15 Score=38.02 Aligned_cols=34 Identities=6% Similarity=0.011 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCc
Q 009313 201 VMFGALDELFEKTKVRPKDVGILVVNCSIFNPTP 234 (537)
Q Consensus 201 l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~P 234 (537)
.....++++|+++|++++|||.+.++..|+..+.
T Consensus 51 ~l~~~i~~~l~~~~~~~~did~iav~~GPG~~tg 84 (305)
T TIGR00329 51 NIPPLLERALIESNVDKSEIDLIAYTQGPGLGGS 84 (305)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEecCCCchhh
Confidence 3477889999999999999999999998875433
No 194
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=66.20 E-value=18 Score=37.00 Aligned_cols=87 Identities=9% Similarity=0.109 Sum_probs=55.5
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCC-Cee------EEEecCccchHHHHHH
Q 009313 195 RLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRG-NII------SYNLGGMGCSAGVIGV 267 (537)
Q Consensus 195 ~~ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~-~~~------~~~l~g~gCs~gl~AL 267 (537)
.+.+......+++++|++.|++ +|||.++...... +..-..+.+++++++ ++. .-+++.++|++-..+|
T Consensus 218 ~~~~~~~~~~~~~~~l~~~~~~-~~i~~~~~h~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L 293 (324)
T cd00827 218 FEAAHKLIAKVVRKALDRAGLS-EDIDYFVPHQPNG---KKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGL 293 (324)
T ss_pred HHHHhHHHHHHHHHHHHHcccc-cccceeeccCchH---HHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHHH
Confidence 3456677788999999999999 9999877442211 155677889998742 111 2234445555655665
Q ss_pred HHHHHHHHcC---CCCeEEEEEec
Q 009313 268 DLARDMLQAN---PNNYAVVVSTE 288 (537)
Q Consensus 268 ~lA~~lL~~g---~~~~aLVVs~E 288 (537)
..+ +..+ +++++|+++.-
T Consensus 294 ~~~---~~~~~~~~Gd~vl~~~~G 314 (324)
T cd00827 294 ASL---LESGKLKAGDRVLLFSYG 314 (324)
T ss_pred HHH---HhcCCCCCCCEEEEEEec
Confidence 544 3333 35778877754
No 195
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=65.08 E-value=14 Score=39.72 Aligned_cols=67 Identities=18% Similarity=0.238 Sum_probs=42.7
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecC--------ccchHHHHHHHHHHHHH
Q 009313 203 FGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGG--------MGCSAGVIGVDLARDML 274 (537)
Q Consensus 203 ~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g--------~gCs~gl~AL~lA~~lL 274 (537)
..|++++++++|++|+|||++=++- ..+...-+..+.||+.+ ..+|.+| .||+|......++.++-
T Consensus 291 ~~a~~~a~~~agl~~~Did~~Ei~d----~Fa~~~l~~~e~lG~~~--~pvN~~GG~la~Ghp~gatG~r~~~~l~~~lr 364 (390)
T PRK06504 291 LPATERALKKAGMKIDDIDLYEVNE----AFASVPLAWLKATGADP--ERLNVNGGAIALGHPLGASGTKLMTTLVHALK 364 (390)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecc----cchHHHHHHHHHhCCCC--CCcCCCCcHHhcCCCcchhHHHHHHHHHHHHH
Confidence 5699999999999999999884331 12333445677888864 3466665 13334334455555554
Q ss_pred H
Q 009313 275 Q 275 (537)
Q Consensus 275 ~ 275 (537)
+
T Consensus 365 ~ 365 (390)
T PRK06504 365 Q 365 (390)
T ss_pred h
Confidence 3
No 196
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=64.38 E-value=12 Score=40.13 Aligned_cols=69 Identities=19% Similarity=0.264 Sum_probs=42.3
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCC-eeEEEecC--------ccchHHHHHHHHHHHH
Q 009313 203 FGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGN-IISYNLGG--------MGCSAGVIGVDLARDM 273 (537)
Q Consensus 203 ~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~-~~~~~l~g--------~gCs~gl~AL~lA~~l 273 (537)
..|++++++++|++|+|||.+=++- ..+...-+..+.||+-+. -..+|++| .||+|....+.++++|
T Consensus 285 ~~a~~~al~~Agl~~~DId~~El~d----~F~~~~l~~~e~lg~~~~~~~~vN~~GG~la~GhP~GAtG~~~v~~l~~~L 360 (387)
T PRK08947 285 VPATQKALKRAGLSISDIDVFELNE----AFAAQSLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLM 360 (387)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecc----cchHHHHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHH
Confidence 6788999999999999999885331 123333445566776211 02344443 3666666666666666
Q ss_pred HH
Q 009313 274 LQ 275 (537)
Q Consensus 274 L~ 275 (537)
-+
T Consensus 361 ~~ 362 (387)
T PRK08947 361 ER 362 (387)
T ss_pred Hh
Confidence 44
No 197
>PRK09604 UGMP family protein; Validated
Probab=64.36 E-value=17 Score=38.25 Aligned_cols=47 Identities=9% Similarity=0.081 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCc-----cHHHHHHHHcCC
Q 009313 200 MVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTP-----SLSAMIINHYKM 246 (537)
Q Consensus 200 ~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~P-----s~a~~I~~~lGl 246 (537)
+.....++++|+++|++++|||.+.++..|+..+. +.+.-++..++.
T Consensus 53 ~~l~~~i~~~L~~~~~~~~did~iavt~GPG~~tglrvg~~~Ak~La~~~~i 104 (332)
T PRK09604 53 ENIVPLIEEALKEAGLTLEDIDAIAVTAGPGLVGALLVGVSFAKALALALNK 104 (332)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHHhHHHHHHHHHHHHHHhCC
Confidence 44578899999999999999999999988865333 234445555554
No 198
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=64.30 E-value=25 Score=35.12 Aligned_cols=72 Identities=17% Similarity=0.195 Sum_probs=44.0
Q ss_pred cCCCCCCcCccccccEEEEc----CCCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCC
Q 009313 419 ASTKPYIPDYKLAFEHFCVH----AASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGD 494 (537)
Q Consensus 419 ~gl~~y~pdf~~did~~~~H----~~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd 494 (537)
.|+.+ +||+|++.= ...+.+--.+.+.|||+++-- |.-+.-.|--++.+.+-.-.++.+. .||.
T Consensus 115 ~g~~~------~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~---R~~i~~~GC~gg~~~L~~A~~~~~~---~p~a 182 (226)
T PF00195_consen 115 AGLDP------SDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQ---RTPIFGMGCAGGAAGLRRAKDIARA---NPGA 182 (226)
T ss_dssp HTS-G------GGECEEEEEESSSSECS-HHHHHHHHHT--TTSE---EEEEES-GGGHHHHHHHHHHHHHHH---STT-
T ss_pred cCCCC------cccceEEEEecCCcCCCchhHHHHhcCCCCCCcE---EEEEeccchhhHHHHHHHHHHHHhC---Cccc
Confidence 68876 999999952 234566668999999997644 5566666666655554333333333 5899
Q ss_pred EEEEEEEc
Q 009313 495 RVWQIAFG 502 (537)
Q Consensus 495 ~VlliafG 502 (537)
+|++++.=
T Consensus 183 ~VLvv~vE 190 (226)
T PF00195_consen 183 RVLVVCVE 190 (226)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEE
Confidence 99998864
No 199
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=63.71 E-value=17 Score=38.42 Aligned_cols=68 Identities=15% Similarity=0.167 Sum_probs=45.3
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeE-E--E-ecCccchHHHHHHH
Q 009313 197 EASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIIS-Y--N-LGGMGCSAGVIGVD 268 (537)
Q Consensus 197 ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~-~--~-l~g~gCs~gl~AL~ 268 (537)
.+....-.+++++|+++|++++|||.+++.- ....+-..+.++||++++-.. . + .+.++.++...+|+
T Consensus 239 ~~~~~~~~~i~~~L~~~gl~~~did~~v~HQ----~~~~i~~~i~~~Lgl~~ek~~~~~l~~~GNtssasip~~L~ 310 (353)
T PRK12880 239 MALECEPKSFKEILEFSKVDEKDIAFHLFHQ----SNAYLVDCIKEELKLNDDKVPNFIMEKYANLSACSLPALLC 310 (353)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhhhHHhhCCHHHHHHHHHHH
Confidence 4455556789999999999999999999542 234456789999999753222 1 2 23344445455554
No 200
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=62.31 E-value=20 Score=38.26 Aligned_cols=67 Identities=15% Similarity=0.217 Sum_probs=42.3
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecC--------ccchHHHHHHHHHHHHH
Q 009313 203 FGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGG--------MGCSAGVIGVDLARDML 274 (537)
Q Consensus 203 ~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g--------~gCs~gl~AL~lA~~lL 274 (537)
..|++++++++|+.++|||++=++ .......-...+.||+.+ ..+|.+| .|++|....++++++|-
T Consensus 283 ~~a~~~a~~~agi~~~did~~e~~----d~Fa~~~~~~~e~lG~~~--~pvN~~GG~l~~Ghp~gasG~~~~~e~~~qL~ 356 (382)
T PRK07801 283 IPATRYALEKTGLSIDDIDVVEIN----EAFAPVVLAWLKETGADP--AKVNPNGGAIALGHPLGATGAKLMTTLLHELE 356 (382)
T ss_pred HHHHHHHHHHcCCCHHHcCEeeec----ccchHHHHHHHHHhCCCc--hhcCCCcchhhhcCcHHHHHHHHHHHHHHHHH
Confidence 468999999999999999988432 112333445567788753 3566664 13444445555555554
Q ss_pred H
Q 009313 275 Q 275 (537)
Q Consensus 275 ~ 275 (537)
.
T Consensus 357 ~ 357 (382)
T PRK07801 357 R 357 (382)
T ss_pred h
Confidence 4
No 201
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=61.32 E-value=11 Score=38.48 Aligned_cols=63 Identities=13% Similarity=0.099 Sum_probs=38.5
Q ss_pred hhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCc-cHHHHHHHHcCCCCCeeEEEecC
Q 009313 194 GRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTP-SLSAMIINHYKMRGNIISYNLGG 257 (537)
Q Consensus 194 ~~~ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~P-s~a~~I~~~lGl~~~~~~~~l~g 257 (537)
.|...+.+ ...++++|+++|++++|||.+.++..|+..++ -.+...++-|...-+++.+.++.
T Consensus 26 ~r~H~~~L-~~~i~~~l~~~~~~~~did~iavt~GPGsftgLrvG~~~Ak~La~~~~~Pli~v~~ 89 (268)
T PF00814_consen 26 SRQHSENL-PPLIEELLKEAGISLSDIDAIAVTRGPGSFTGLRVGLSFAKGLALALNIPLIGVSH 89 (268)
T ss_dssp HHHHHHHH-HHHHHHHHHHHTS-GGGESEEEEEEESS-HHHHHHHHHHHHHHHHHTT--EEEEEH
T ss_pred HHHHHHHH-HHHHHHHHHHcCCCHHHCCEEEEecCCCcccccHHHHHHHHHHHHHhCCCeEeecc
Confidence 34455554 68899999999999999999999998876543 11222333333222456666663
No 202
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=60.84 E-value=33 Score=36.84 Aligned_cols=69 Identities=16% Similarity=0.346 Sum_probs=40.3
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCe-eEEEecC--------ccchHHHHHHHHHHH
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNI-ISYNLGG--------MGCSAGVIGVDLARD 272 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~-~~~~l~g--------~gCs~gl~AL~lA~~ 272 (537)
...|++++++++|++|+|||.+=++ .......-...+.||+-+.. ..+|.+| .|++|.-..+.++ +
T Consensus 282 ~~~a~~~al~~AGi~p~DId~~Ei~----daFa~~~l~~~e~lg~~~~g~~~vN~~GG~la~GhP~GATG~r~v~~l~-~ 356 (385)
T TIGR02445 282 PVPATQKALKRAGLSISDIDVFELN----EAFAAQALPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLL-N 356 (385)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEEc----cccHHHHHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHH-H
Confidence 3678899999999999999987543 11233334455667762110 2344443 2555544545555 4
Q ss_pred HHH
Q 009313 273 MLQ 275 (537)
Q Consensus 273 lL~ 275 (537)
++.
T Consensus 357 ~l~ 359 (385)
T TIGR02445 357 LME 359 (385)
T ss_pred HHH
Confidence 443
No 203
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=60.73 E-value=27 Score=37.72 Aligned_cols=75 Identities=12% Similarity=0.011 Sum_probs=43.1
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcC
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVN-CSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQAN 277 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~-ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g 277 (537)
..++++++|+++|+ ++|||.|... |++..--..-+..|.+.|+.+-+..-=.++....++|...+-.+...|+.+
T Consensus 282 ~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~pvsS~Ks~~GH~l~AAGa~e~i~~~lal~~g 357 (398)
T PRK06519 282 LEASLERLLKPAGG-LAAPTAVISGATGAHPATAEEKAALEAALAGPVRGIGTLFGHTMEAQFPLGLALAALSVSKG 357 (398)
T ss_pred HHHHHHHHHHHCCC-cccCCEEEeCCCCCCCccHHHHHHHHHHcCCCccccchhhccchHHHHHHHHHHHHHHHhcC
Confidence 47899999999999 8999997744 443322333455667777743111111233233444444444444445544
No 204
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=59.99 E-value=16 Score=35.48 Aligned_cols=58 Identities=10% Similarity=0.125 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCc-cHHHHHHHHcCCCCCeeEEEecC
Q 009313 200 MVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTP-SLSAMIINHYKMRGNIISYNLGG 257 (537)
Q Consensus 200 ~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~P-s~a~~I~~~lGl~~~~~~~~l~g 257 (537)
+.....++++|+++|++++|||.+.++..|+..+. -.+..+++-+...-+++.+.++.
T Consensus 35 ~~l~~~i~~~l~~~~~~~~~i~~iav~~GPGSfTGlRig~~~akgla~~~~~p~~~vss 93 (202)
T TIGR03725 35 EILLPMIEELLAEAGLSLQDLDAIAVGVGPGSFTGLRIGLATAKGLALALGIPLVGVSS 93 (202)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHHHhCCCEEecCH
Confidence 44577899999999999999999999998876554 11222333332222355666663
No 205
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=59.88 E-value=16 Score=38.84 Aligned_cols=76 Identities=13% Similarity=0.099 Sum_probs=48.7
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCccHHHHHHHHcCCCC-Cee----EEEecCccchHHHHHHHHHHHHHH
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVN-CSIFNPTPSLSAMIINHYKMRG-NII----SYNLGGMGCSAGVIGVDLARDMLQ 275 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~-ss~~~~~Ps~a~~I~~~lGl~~-~~~----~~~l~g~gCs~gl~AL~lA~~lL~ 275 (537)
..++++++|+++|++++|||.+... +....-.+.-..-+.+.++-+. .++ .-.++...+++|+..+-.+...|+
T Consensus 277 ~~~~i~~al~~agi~~~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~ 356 (406)
T cd00834 277 AARAMRAALADAGLSPEDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLALR 356 (406)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEecccccCccccHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHHHh
Confidence 4678999999999999999988755 4433333333445566665420 111 112333567777877777777777
Q ss_pred cC
Q 009313 276 AN 277 (537)
Q Consensus 276 ~g 277 (537)
.+
T Consensus 357 ~~ 358 (406)
T cd00834 357 DG 358 (406)
T ss_pred cC
Confidence 76
No 206
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=59.51 E-value=19 Score=38.44 Aligned_cols=31 Identities=10% Similarity=0.107 Sum_probs=25.6
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEec
Q 009313 197 EASMVMFGALDELFEKTKVRPKDVGILVVNC 227 (537)
Q Consensus 197 ea~~l~~~Aa~~aL~~agi~~~dId~LI~~s 227 (537)
........+.+++|+++|++++|||.+++..
T Consensus 202 ~y~~~~~~~~~~~l~~~g~~~~did~~i~H~ 232 (379)
T TIGR01835 202 QYLNAFENAWNDYAKRTGLSLADFAAFCFHV 232 (379)
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHcCEEEECC
Confidence 4455567889999999999999999988654
No 207
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=59.50 E-value=24 Score=38.07 Aligned_cols=68 Identities=21% Similarity=0.271 Sum_probs=41.5
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHH--HHHcCCCCCeeEEEecC--------ccchHHHHHHHHHH
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMI--INHYKMRGNIISYNLGG--------MGCSAGVIGVDLAR 271 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I--~~~lGl~~~~~~~~l~g--------~gCs~gl~AL~lA~ 271 (537)
...|++++|+++|++|+|||++=++ .+-....+ .+.||++ ...+|++| .|++|....+.++.
T Consensus 292 ~~~a~~~Al~~AGl~p~DID~~ei~------dafa~~~l~~~~~l~~~--~~~vN~sGg~~a~GHplgAtG~~~~~~~~~ 363 (392)
T PRK06633 292 PVPASQKALSKAGWSVNDLEVIEVN------EAFAAQSIYVNREMKWD--MEKVNINGGAIAIGHPIGASGGRVLITLIH 363 (392)
T ss_pred HHHHHHHHHHHcCCCHHHcCeeehh------hHHHHHHHHHHhhhCCC--ccccCCCCchHhhCCcHHHHHHHHHHHHHH
Confidence 3678999999999999999988633 11111111 2344443 12334433 36667777777777
Q ss_pred HHHHcC
Q 009313 272 DMLQAN 277 (537)
Q Consensus 272 ~lL~~g 277 (537)
+|-+.+
T Consensus 364 qL~~~~ 369 (392)
T PRK06633 364 GLRRAK 369 (392)
T ss_pred HHHhcC
Confidence 776543
No 208
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=59.04 E-value=46 Score=36.29 Aligned_cols=25 Identities=12% Similarity=0.073 Sum_probs=21.5
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVN 226 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ 226 (537)
...|++++|+++|++++|||++=++
T Consensus 311 ~~~a~~~al~~AGl~~~DiD~~Ei~ 335 (428)
T PRK08963 311 PAYATPLALERAGLTLADLTLIDMH 335 (428)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEc
Confidence 3578999999999999999998544
No 209
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=58.58 E-value=17 Score=38.93 Aligned_cols=76 Identities=11% Similarity=0.103 Sum_probs=44.1
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCccHHHHHHHHcCCC-CCeeE----EEecCccchHHHHHHHHHHHHHH
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVN-CSIFNPTPSLSAMIINHYKMR-GNIIS----YNLGGMGCSAGVIGVDLARDMLQ 275 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~-ss~~~~~Ps~a~~I~~~lGl~-~~~~~----~~l~g~gCs~gl~AL~lA~~lL~ 275 (537)
...|++++|+++|++++|||.+-.. +.+..-.+.-..-+...||-. .+++. -.++...+++|+..+-.+...|+
T Consensus 278 ~~~a~~~Al~~agi~~~dId~v~~hgtgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~ 357 (411)
T PRK07314 278 AARAMKLALKDAGINPEDIDYINAHGTSTPAGDKAETQAIKRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIR 357 (411)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEccccCCccccHHHHHHHHHHhcccCCCCeeECccchhchhHHHHHHHHHHHHHHHHh
Confidence 3678999999999999999998644 443232333344566666632 11221 12232244555555555555555
Q ss_pred cC
Q 009313 276 AN 277 (537)
Q Consensus 276 ~g 277 (537)
.+
T Consensus 358 ~~ 359 (411)
T PRK07314 358 DQ 359 (411)
T ss_pred CC
Confidence 54
No 210
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=58.14 E-value=23 Score=35.46 Aligned_cols=83 Identities=16% Similarity=0.223 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCc-cHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcCCC
Q 009313 201 VMFGALDELFEKTKVRPKDVGILVVNCSIFNPTP-SLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQANPN 279 (537)
Q Consensus 201 l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~P-s~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g~~ 279 (537)
....-++++|++++++.+|||.+-+.-.|+.-.| +..+.+++-+.+=-+.+-..++ .|-|-+ .+.+ ++....+
T Consensus 52 ~il~Lv~~al~ea~v~~~diD~icyTKGPGmgaPL~~vaivaRtlsllw~kPlv~VN--HCigHI---EMGR-~iTgA~n 125 (336)
T KOG2708|consen 52 WILGLVKQALEEAGVTSDDIDCICYTKGPGMGAPLSVVAIVARTLSLLWNKPLVGVN--HCIGHI---EMGR-EITGAQN 125 (336)
T ss_pred HHHHHHHHHHHHcCCChhhCCEEEEcCCCCCCCchhhHHHHHHHHHHHhCCCcccch--hhhhhh---hhcc-eeccCCC
Confidence 3466778899999999999999988877776666 3344455555442245655666 676532 3332 2222335
Q ss_pred CeEEEEEecc
Q 009313 280 NYAVVVSTEM 289 (537)
Q Consensus 280 ~~aLVVs~E~ 289 (537)
-.+|-|++-+
T Consensus 126 PvvLYvSGGN 135 (336)
T KOG2708|consen 126 PVVLYVSGGN 135 (336)
T ss_pred CEEEEEeCCc
Confidence 6788888776
No 211
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=57.95 E-value=31 Score=36.92 Aligned_cols=75 Identities=12% Similarity=0.085 Sum_probs=44.8
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCccHHHHHHHHcCCCCCe--eEEEecCccchHHHHHHHHHHHHHHcC
Q 009313 203 FGALDELFEKTKVRPKDVGILVVN-CSIFNPTPSLSAMIINHYKMRGNI--ISYNLGGMGCSAGVIGVDLARDMLQAN 277 (537)
Q Consensus 203 ~~Aa~~aL~~agi~~~dId~LI~~-ss~~~~~Ps~a~~I~~~lGl~~~~--~~~~l~g~gCs~gl~AL~lA~~lL~~g 277 (537)
..+++++|+++|++|+|||.+... +.+..-.+.-...|.+.+|-+..+ .--.++...+++|+..+-.+...|+.+
T Consensus 263 ~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~D~~E~~al~~~f~~~~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~ 340 (392)
T PRK09185 263 ILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVAAVFGDGVPCSSTKGLTGHTLGAAGAVEAAICWLALRHG 340 (392)
T ss_pred HHHHHHHHHHcCCCHHHccEEEeCCCCCcCCCHHHHHHHHHHhCCCCceeCCCcccccChhhcchHHHHHHHHHHhcC
Confidence 578999999999999999997644 433222243345566667632111 111233345566666665555556554
No 212
>PRK14878 UGMP family protein; Provisional
Probab=57.34 E-value=18 Score=37.96 Aligned_cols=52 Identities=13% Similarity=0.131 Sum_probs=37.1
Q ss_pred hhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCc-----cHHHHHHHHcCC
Q 009313 194 GRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTP-----SLSAMIINHYKM 246 (537)
Q Consensus 194 ~~~ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~P-----s~a~~I~~~lGl 246 (537)
.+...+.+. .+++++|+++|++++|||.+.++..|+..+. +.+..++..++.
T Consensus 41 ~~~h~~~l~-~~i~~~l~~a~~~~~did~Iavt~gPG~~~~lrvg~~~Ak~la~~~~~ 97 (323)
T PRK14878 41 AQHHAEVAP-ELLRKALEKAGISIEDIDAVAVSQGPGLGPALRVGATAARALALKYNK 97 (323)
T ss_pred HHHHHHHHH-HHHHHHHHHcCCCHHHCCEEEEecCCCcccchHHHHHHHHHHHHHhCC
Confidence 445555554 8999999999999999999999988765432 224445555554
No 213
>PRK05790 putative acyltransferase; Provisional
Probab=56.93 E-value=29 Score=37.18 Aligned_cols=76 Identities=17% Similarity=0.211 Sum_probs=45.4
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecC--------ccchHHHHHHHHHHHH
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGG--------MGCSAGVIGVDLARDM 273 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g--------~gCs~gl~AL~lA~~l 273 (537)
...|++++++++|++|+|||++-+.- ......-...+.||+.+ ..+|++| .|++|....++++++|
T Consensus 293 ~~~a~~~a~~~Agi~~~did~~e~~d----~f~~~~l~~~e~lg~~~--~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL 366 (393)
T PRK05790 293 PVPAIRKALEKAGWSLADLDLIEINE----AFAAQALAVEKELGLDP--EKVNVNGGAIALGHPIGASGARILVTLLHEM 366 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCc----HHHHHHHHHHHHhCCCh--hhcCCCcchhhhCcchhhhHHHHHHHHHHHH
Confidence 35799999999999999999985321 12233344566777631 2333332 2455555666666665
Q ss_pred HHcCCCCeEEE
Q 009313 274 LQANPNNYAVV 284 (537)
Q Consensus 274 L~~g~~~~aLV 284 (537)
-.. ..+++|+
T Consensus 367 ~~~-~~~~gl~ 376 (393)
T PRK05790 367 KRR-GAKKGLA 376 (393)
T ss_pred Hhc-CCCeEEE
Confidence 543 2344443
No 214
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=56.92 E-value=31 Score=35.93 Aligned_cols=54 Identities=7% Similarity=0.012 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCc-----cHHHHHHHHcCCCCCeeEEEecC
Q 009313 200 MVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTP-----SLSAMIINHYKMRGNIISYNLGG 257 (537)
Q Consensus 200 ~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~P-----s~a~~I~~~lGl~~~~~~~~l~g 257 (537)
+.....++++|+++|++.+|||.+.++..|+..+. +.+.-++..++ ++.+.++.
T Consensus 51 ~~l~~~i~~~l~~~~~~~~~id~iav~~GPGsftglrig~~~Ak~la~~~~----~p~~~v~h 109 (314)
T TIGR03723 51 EAIPPLIEEALAEAGLTLSDIDAIAVTAGPGLIGALLVGVSFAKALALALN----KPLIGVNH 109 (314)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHHHhC----CCEEeccc
Confidence 33477889999999999999999999998875433 22333444443 45556664
No 215
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=56.76 E-value=20 Score=38.29 Aligned_cols=77 Identities=14% Similarity=0.059 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCccHHHHHHHHcCCC-CCeeE----EEecCccchHHHHHHHHHHHHH
Q 009313 201 VMFGALDELFEKTKVRPKDVGILVVN-CSIFNPTPSLSAMIINHYKMR-GNIIS----YNLGGMGCSAGVIGVDLARDML 274 (537)
Q Consensus 201 l~~~Aa~~aL~~agi~~~dId~LI~~-ss~~~~~Ps~a~~I~~~lGl~-~~~~~----~~l~g~gCs~gl~AL~lA~~lL 274 (537)
-...+++++|+++|++|+|||.+... +++....+.-+.-+.+-+|-. .+++. -.++....++++..+-.+...|
T Consensus 275 ~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~~D~~E~~ai~~~~~~~~~~~~v~s~K~~~Gh~~~Asg~~~l~~~~~~l 354 (407)
T cd00828 275 GIARAIRTALAKAGLSLDDLDVISAHGTSTPANDVAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQLIGALQSL 354 (407)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEecccccCccccHHHHHHHHHHHhccCCCceeecccchhccchhhhhHHHHHHHHHHH
Confidence 34789999999999999999988744 444332333344455555431 11221 1233344555555555555555
Q ss_pred HcC
Q 009313 275 QAN 277 (537)
Q Consensus 275 ~~g 277 (537)
+.+
T Consensus 355 ~~~ 357 (407)
T cd00828 355 EHG 357 (407)
T ss_pred hcC
Confidence 554
No 216
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=55.42 E-value=25 Score=37.50 Aligned_cols=45 Identities=13% Similarity=0.124 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCccHHHHHHHHcCC
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVN-CSIFNPTPSLSAMIINHYKM 246 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~-ss~~~~~Ps~a~~I~~~lGl 246 (537)
...+++++|+++|++++|||.+... +.+..-.+.-...+.+.||-
T Consensus 277 ~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~D~~E~~a~~~~~~~ 322 (407)
T TIGR03150 277 AARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKAIKRVFGD 322 (407)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCCCHHHHHHHHHHhcc
Confidence 4688999999999999999998644 44433334445556666764
No 217
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=54.79 E-value=37 Score=36.25 Aligned_cols=39 Identities=15% Similarity=0.339 Sum_probs=28.3
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCccHHHHHHHHcCC
Q 009313 203 FGALDELFEKTKVRPKDVGILVVN-CSIFNPTPSLSAMIINHYKM 246 (537)
Q Consensus 203 ~~Aa~~aL~~agi~~~dId~LI~~-ss~~~~~Ps~a~~I~~~lGl 246 (537)
..|++++++++|++++|||.+-.. +.+ ...-+..+.||+
T Consensus 261 ~~a~~~al~~aGi~~~did~~e~~d~ft-----~~~~~~~e~lgl 300 (389)
T PRK06064 261 VVAAEKAYKMAGIEPKDIDVAEVHDCFT-----IAEILAYEDLGF 300 (389)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecCCCc-----HHHHHHHHHcCC
Confidence 578999999999999999988543 322 233445666776
No 218
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=53.52 E-value=36 Score=36.63 Aligned_cols=70 Identities=14% Similarity=0.140 Sum_probs=44.2
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCC----------------eeEEEecC--------
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGN----------------IISYNLGG-------- 257 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~----------------~~~~~l~g-------- 257 (537)
...|++++|+++|++++|||++=++- ..+...-+..+.||+.+. -..+|.+|
T Consensus 271 ~~~A~~~al~~Agi~~~DID~~Ei~d----~Fa~~~l~~~e~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~GhP 346 (393)
T cd00826 271 PIEAARKALEKAGLGIGDLDLIEAHD----AFAANACATNEALGLCPEGQGGALVDRGDNTYGGKSIINPNGGAIAIGHP 346 (393)
T ss_pred HHHHHHHHHHHcCCCHHHcCeeehhh----hhHHHHHHHHHHhCCCcccchhhhhhcCccccCCcceECCCCchhhcCCC
Confidence 36899999999999999999875431 122233344455665321 13455543
Q ss_pred ccchHHHHHHHHHHHHHH
Q 009313 258 MGCSAGVIGVDLARDMLQ 275 (537)
Q Consensus 258 ~gCs~gl~AL~lA~~lL~ 275 (537)
.||+|....++++++|-.
T Consensus 347 ~gAtG~~~~~e~~~qL~g 364 (393)
T cd00826 347 IGASGAAICAELCFELKG 364 (393)
T ss_pred ccccHHHHHHHHHHHHhh
Confidence 356676777777777754
No 219
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=53.20 E-value=40 Score=36.53 Aligned_cols=76 Identities=13% Similarity=0.089 Sum_probs=44.8
Q ss_pred HHHHHHHHHHh-CCCCCCCccEEEEe-ccCCCCCccHHHHHHHHcCCCC--CeeEE----EecCccchHHHHHHHHHHHH
Q 009313 202 MFGALDELFEK-TKVRPKDVGILVVN-CSIFNPTPSLSAMIINHYKMRG--NIISY----NLGGMGCSAGVIGVDLARDM 273 (537)
Q Consensus 202 ~~~Aa~~aL~~-agi~~~dId~LI~~-ss~~~~~Ps~a~~I~~~lGl~~--~~~~~----~l~g~gCs~gl~AL~lA~~l 273 (537)
...|++++|++ +|++|+|||.+-.. |.+..-.+.-..-+.+-+|-.. .++.- .++....++|+..+-.+...
T Consensus 285 ~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~v~s~K~~~GH~~~AaG~~~l~~~~l~ 364 (421)
T PTZ00050 285 ARRCMENALKDGANININDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVESIVTILS 364 (421)
T ss_pred HHHHHHHHHHhccCCChhhCCEEECCCccCCCCCHHHHHHHHHHhccccCCCceEECccccccccHHHHHHHHHHHHHHH
Confidence 47899999999 99999999998644 4432222333345677776421 12111 23333445555555555555
Q ss_pred HHcC
Q 009313 274 LQAN 277 (537)
Q Consensus 274 L~~g 277 (537)
|+.+
T Consensus 365 l~~~ 368 (421)
T PTZ00050 365 LYEQ 368 (421)
T ss_pred HHcC
Confidence 6654
No 220
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=53.09 E-value=50 Score=35.51 Aligned_cols=67 Identities=16% Similarity=0.188 Sum_probs=40.9
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecC--------ccchHHHHHHHHHHHHH
Q 009313 203 FGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGG--------MGCSAGVIGVDLARDML 274 (537)
Q Consensus 203 ~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g--------~gCs~gl~AL~lA~~lL 274 (537)
..+++++++++|++|+|||.+=++ ...+...-...+.||+.+ ..+|.+| .|++|....++++.+|-
T Consensus 294 ~~a~~~al~~Agi~~~Did~~Ei~----d~f~~~~l~~~e~lg~~~--~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~ 367 (394)
T PLN02644 294 ALAIPKALKHAGLEASQVDYYEIN----EAFSVVALANQKLLGLDP--EKVNVHGGAVSLGHPIGCSGARILVTLLGVLR 367 (394)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeC----cHHHHHHHHHHHHhCCCc--cccCCCCChHhhCCCHHHHHHHHHHHHHHHHH
Confidence 459999999999999999988642 112233344556777632 2333332 24555555566666654
Q ss_pred H
Q 009313 275 Q 275 (537)
Q Consensus 275 ~ 275 (537)
.
T Consensus 368 ~ 368 (394)
T PLN02644 368 S 368 (394)
T ss_pred h
Confidence 3
No 221
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=52.34 E-value=28 Score=37.42 Aligned_cols=75 Identities=13% Similarity=0.171 Sum_probs=46.9
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCccHHHHHHHHcCCCCCeeEE----EecCccchHHHHHHHHHHHHHHc
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVN-CSIFNPTPSLSAMIINHYKMRGNIISY----NLGGMGCSAGVIGVDLARDMLQA 276 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~-ss~~~~~Ps~a~~I~~~lGl~~~~~~~----~l~g~gCs~gl~AL~lA~~lL~~ 276 (537)
...|++++|+++|++|+|||.+... |.+..-.+.-+.-|.+-||-. .++.. .++...+++|+..+-.+...|+.
T Consensus 272 ~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~D~~E~~al~~~fg~~-~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~~ 350 (399)
T cd00832 272 LARAIRLALADAGLTPEDVDVVFADAAGVPELDRAEAAALAAVFGPR-GVPVTAPKTMTGRLYAGGAPLDVATALLALRD 350 (399)
T ss_pred HHHHHHHHHHHcCCCHHHccEEEeccCcCCCCCHHHHHHHHHHhCCC-CCceeCCCchhcchHHHHHHHHHHHHHHHHhC
Confidence 5788999999999999999987644 444333444455677777743 22211 23333455666666555556665
Q ss_pred C
Q 009313 277 N 277 (537)
Q Consensus 277 g 277 (537)
+
T Consensus 351 ~ 351 (399)
T cd00832 351 G 351 (399)
T ss_pred C
Confidence 4
No 222
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=51.82 E-value=32 Score=37.22 Aligned_cols=70 Identities=16% Similarity=0.210 Sum_probs=43.2
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCccHHHHHHHHcCCCCCeeEEEecC--------ccchHHHHHHHHHHH
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVN-CSIFNPTPSLSAMIINHYKMRGNIISYNLGG--------MGCSAGVIGVDLARD 272 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~-ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g--------~gCs~gl~AL~lA~~ 272 (537)
...|++++++++|++++|||++-++ +. ....-...+.||+..+-..+|.+| .|++|....+.++++
T Consensus 298 ~~~a~~~a~~~agl~~~did~~ei~d~F-----a~~~l~~~e~lg~~~~~~~vN~~GG~la~GhP~gAtG~~~~~el~~q 372 (401)
T PRK08131 298 PVEAIKKALARAGLTLDDMDIIEINEAF-----ASQVLGCLKGLGVDFDDPRVNPNGGAIAVGHPLGASGARLALTAARE 372 (401)
T ss_pred HHHHHHHHHHHcCCCHHHCCeehhccHH-----HHHHHHHHHHcCCCCCCCCccCCccHHhcCCchhhhHHHHHHHHHHH
Confidence 3689999999999999999987633 21 111223446677632223445554 255566666677766
Q ss_pred HHHc
Q 009313 273 MLQA 276 (537)
Q Consensus 273 lL~~ 276 (537)
|-..
T Consensus 373 L~~~ 376 (401)
T PRK08131 373 LQRR 376 (401)
T ss_pred HHhc
Confidence 6543
No 223
>PLN03168 chalcone synthase; Provisional
Probab=51.63 E-value=43 Score=36.05 Aligned_cols=70 Identities=17% Similarity=0.082 Sum_probs=44.3
Q ss_pred cCCCCCCcCccccccEEEEcCC----CHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCC
Q 009313 419 ASTKPYIPDYKLAFEHFCVHAA----SKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGD 494 (537)
Q Consensus 419 ~gl~~y~pdf~~did~~~~H~~----g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd 494 (537)
+|+++ +||||+++... .+..--.+++.||+++.-. +. --.|+++++-.+.|..+..-=+-.++.
T Consensus 116 ag~~~------~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~---r~---~d~~~gC~g~~~aL~~A~~~i~~~~~~ 183 (389)
T PLN03168 116 WGGRK------SDITHIVFATTSGVNMPGADHALAKLLGLKPTVK---RV---MMYQTGCFGGASVLRVAKDLAENNKGA 183 (389)
T ss_pred cCCCH------HHCCEEEEECCCCCCCccHHHHHHHHhCcCCcce---ee---eeeCCccHHHHHHHHHHHHHHHhCCCC
Confidence 78887 99999987543 2444457899999976421 11 135677888888886543311123566
Q ss_pred EEEEEE
Q 009313 495 RVWQIA 500 (537)
Q Consensus 495 ~Vllia 500 (537)
+|++++
T Consensus 184 ~VLVV~ 189 (389)
T PLN03168 184 RVLAVA 189 (389)
T ss_pred EEEEEE
Confidence 777655
No 224
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=51.56 E-value=31 Score=36.97 Aligned_cols=69 Identities=13% Similarity=0.138 Sum_probs=43.0
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCccHHHHHHHHcCCCCC----------------eeEEEecC-------
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVN-CSIFNPTPSLSAMIINHYKMRGN----------------IISYNLGG------- 257 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~-ss~~~~~Ps~a~~I~~~lGl~~~----------------~~~~~l~g------- 257 (537)
...|++++++++|++|+|||++-+. +. +...-...+.||+.+. -..+|.+|
T Consensus 262 ~~~a~~~a~~~agl~~~did~~e~~d~f-----~~~~~~~~e~lg~~~~G~~~~~~~~g~~~~~g~~pvN~sGG~la~Gh 336 (389)
T PRK07516 262 PRRAWQRALAQAGVTLDDLSFVETHDCF-----TIAELIEYEAMGLAPPGQGARAIREGWTAKDGKLPVNPSGGLKAKGH 336 (389)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEecCC-----CHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCC
Confidence 3579999999999999999998544 32 2223344555555321 12455433
Q ss_pred -ccchHHHHHHHHHHHHHH
Q 009313 258 -MGCSAGVIGVDLARDMLQ 275 (537)
Q Consensus 258 -~gCs~gl~AL~lA~~lL~ 275 (537)
.||+|....+..+.+|..
T Consensus 337 p~gasG~~~~~e~~~QL~g 355 (389)
T PRK07516 337 PIGATGVSMHVLAAMQLTG 355 (389)
T ss_pred CccHHHHHHHHHHHHHhcC
Confidence 245666666777777653
No 225
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=50.76 E-value=44 Score=35.51 Aligned_cols=61 Identities=11% Similarity=0.176 Sum_probs=39.3
Q ss_pred hhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccH--HHHHHHHcCCCCCeeEEEec
Q 009313 194 GRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSL--SAMIINHYKMRGNIISYNLG 256 (537)
Q Consensus 194 ~~~ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~--a~~I~~~lGl~~~~~~~~l~ 256 (537)
+|...+.+ ...++++|+++|++++|||.+.++..|+. .+++ ....++-|...-+++.+.++
T Consensus 46 ~r~H~~~l-~~~i~~~l~~a~~~~~did~Iavt~GPGl-~~~LrVG~~~Ak~LA~a~~~PligV~ 108 (345)
T PTZ00340 46 AQHHREHI-LSLVKEALEEAKITPSDISLICYTKGPGM-GAPLSVGAVVARTLSLLWGKPLVGVN 108 (345)
T ss_pred HHHHHHHH-HHHHHHHHHHcCCCHHHCCEEEEecCCCc-HhhHHHHHHHHHHHHHHcCCCEeecc
Confidence 34444444 67889999999999999999998888764 2322 22333333332245666666
No 226
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=50.68 E-value=40 Score=35.62 Aligned_cols=45 Identities=13% Similarity=0.104 Sum_probs=33.1
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCccHHHHHHHHcCC
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVN-CSIFNPTPSLSAMIINHYKM 246 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~-ss~~~~~Ps~a~~I~~~lGl 246 (537)
...|++++|+++|++|+|||.+-.. |.+..-.+.-..-|.+-||-
T Consensus 208 ~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~ 253 (342)
T PRK14691 208 AYRAMKIALRQAGITPEQVQHLNAHATSTPVGDLGEINAIKHLFGE 253 (342)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCCCCcCCCHHHHHHHHHHhCC
Confidence 4789999999999999999987543 54433345556667777774
No 227
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=50.46 E-value=37 Score=38.30 Aligned_cols=76 Identities=9% Similarity=0.127 Sum_probs=44.2
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCccHHHHHHHHcCCCCCeeEE----EecCccchHHHHHHHHHHHHHHc
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVN-CSIFNPTPSLSAMIINHYKMRGNIISY----NLGGMGCSAGVIGVDLARDMLQA 276 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~-ss~~~~~Ps~a~~I~~~lGl~~~~~~~----~l~g~gCs~gl~AL~lA~~lL~~ 276 (537)
...+.+++|+++|++|+|||.|-.. |++..-.+.-...|.+-||-.+.++.- .++...+++|+..+..+-..|+.
T Consensus 407 ~~~am~~AL~~AGl~p~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~~~~~pV~S~Ks~iGH~~gAAGa~eli~~~lal~~ 486 (540)
T PLN02787 407 VILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQNPELRVNSTKSMIGHLLGAAGAVEAIATVQAIRT 486 (540)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEccCccCCCCCHHHHHHHHHHhCCCCCceeeCCCCCcCCCcccchHHHHHHHHHHHhc
Confidence 3689999999999999999987643 443222233345566777642222221 23333444555555555555655
Q ss_pred C
Q 009313 277 N 277 (537)
Q Consensus 277 g 277 (537)
+
T Consensus 487 g 487 (540)
T PLN02787 487 G 487 (540)
T ss_pred C
Confidence 4
No 228
>PRK08256 lipid-transfer protein; Provisional
Probab=49.98 E-value=45 Score=35.69 Aligned_cols=41 Identities=10% Similarity=0.225 Sum_probs=28.4
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCC
Q 009313 203 FGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMR 247 (537)
Q Consensus 203 ~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~ 247 (537)
..|++++++++|++++|||++-+.- ..+...-+..+.||+.
T Consensus 267 ~~a~~~a~~~ag~~~~DiD~~ei~d----~f~~~~l~~le~lg~~ 307 (391)
T PRK08256 267 RAAAQQVYEQAGIGPEDIDVVELHD----CFSANELLTYEALGLC 307 (391)
T ss_pred HHHHHHHHHHcCCCHHHCCEEeecc----CCcHHHHHHHHHcCCC
Confidence 5799999999999999999885431 1233334445566664
No 229
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=49.36 E-value=31 Score=37.04 Aligned_cols=76 Identities=14% Similarity=0.215 Sum_probs=43.7
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCccHHHHHHHHcCCCCCeeE--EEecCccchHHHHHHHHHHHHHHcC
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVN-CSIFNPTPSLSAMIINHYKMRGNIIS--YNLGGMGCSAGVIGVDLARDMLQAN 277 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~-ss~~~~~Ps~a~~I~~~lGl~~~~~~--~~l~g~gCs~gl~AL~lA~~lL~~g 277 (537)
...|++++|+++|++|+|||.+... +++..-.+.-..-|.+-||-+..+.+ -.++....++|+..+-.+...|+.+
T Consensus 256 ~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg~~~~v~s~K~~~GH~~~AaG~~~~~~~~~~l~~~ 334 (381)
T PRK05952 256 AIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREANLIQALFPHRVAVSSTKGATGHTLGASGALGVAFSLLALRHQ 334 (381)
T ss_pred HHHHHHHHHHHhCCCHHHeeEEEccCCCCCCCcHHHHHHHHHHcCCCCeeecchhhhccChHHHHHHHHHHHHHHHhcC
Confidence 4789999999999999999998644 44332233334456666662211111 1222234445555555555555554
No 230
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=49.28 E-value=24 Score=36.85 Aligned_cols=37 Identities=14% Similarity=0.095 Sum_probs=29.2
Q ss_pred hhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCC
Q 009313 194 GRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFN 231 (537)
Q Consensus 194 ~~~ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~ 231 (537)
.|...+.+. ..++++|+++|++++|||.+.++..|..
T Consensus 42 ~~~H~~~l~-~~i~~~l~~~~~~~~did~Iavt~gPg~ 78 (322)
T TIGR03722 42 AEHHAEVAP-KLIKEALEEAGVSLEDIDAVAFSQGPGL 78 (322)
T ss_pred HHHHHHHHH-HHHHHHHHHcCCCHHHCCEEEEecCCch
Confidence 445555554 4499999999999999999999887753
No 231
>PLN03173 chalcone synthase; Provisional
Probab=49.08 E-value=49 Score=35.65 Aligned_cols=70 Identities=14% Similarity=0.044 Sum_probs=44.2
Q ss_pred cCCCCCCcCccccccEEEEcC----CCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCC
Q 009313 419 ASTKPYIPDYKLAFEHFCVHA----ASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGD 494 (537)
Q Consensus 419 ~gl~~y~pdf~~did~~~~H~----~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd 494 (537)
+|+++ +||||++... ..+..--.+++.||++..-. +. --.|++++.-.+.|..+..-=+-.++.
T Consensus 117 ag~~~------~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~---~~---~~~~~gC~g~~~aL~~A~~~~~~~~~~ 184 (391)
T PLN03173 117 WGQPK------SKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVK---RF---MMYQQGCFAGGTVLRLAKDLAENNKGA 184 (391)
T ss_pred cCCCH------HHCCEEEEEccCCCcccHHHHHHHHHhCCCccce---ee---ehhcCccHHHHHHHHHHHHHHHhCCCC
Confidence 78887 9999987643 23455556899999976421 11 135677888888886554321124567
Q ss_pred EEEEEE
Q 009313 495 RVWQIA 500 (537)
Q Consensus 495 ~Vllia 500 (537)
+|++++
T Consensus 185 ~vLVV~ 190 (391)
T PLN03173 185 RVLVVC 190 (391)
T ss_pred eEEEEE
Confidence 777664
No 232
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=48.36 E-value=42 Score=36.40 Aligned_cols=76 Identities=13% Similarity=0.144 Sum_probs=43.4
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCccHHHHHHHHcCCC-CCeeEE----EecCccchHHHHHHHHHHHHHH
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVN-CSIFNPTPSLSAMIINHYKMR-GNIISY----NLGGMGCSAGVIGVDLARDMLQ 275 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~-ss~~~~~Ps~a~~I~~~lGl~-~~~~~~----~l~g~gCs~gl~AL~lA~~lL~ 275 (537)
...+++++|+++|++|+|||.+... +.+....+.-..-|.+.+|-+ ++++.- .++....++|+..+-.+...|+
T Consensus 291 ~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~~d~~E~~al~~~~~~~~~~~pv~s~k~~~Gh~~~AsG~~~~~~~~l~l~ 370 (425)
T PRK06501 291 AIGAIRAALADAGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFGERLASIPVSSNKSMIGHTLTAAGAVEAVFSLLTIQ 370 (425)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecCccCcchHHHHHHHHHHHhcccCCCcEEECCCcccCCCchhhhHHHHHHHHHHHh
Confidence 4688999999999999999998754 443322333344455556532 122221 1222334455555555555555
Q ss_pred cC
Q 009313 276 AN 277 (537)
Q Consensus 276 ~g 277 (537)
.+
T Consensus 371 ~~ 372 (425)
T PRK06501 371 TG 372 (425)
T ss_pred cC
Confidence 54
No 233
>PLN03172 chalcone synthase family protein; Provisional
Probab=47.46 E-value=52 Score=35.50 Aligned_cols=70 Identities=14% Similarity=0.031 Sum_probs=43.0
Q ss_pred cCCCCCCcCccccccEEEEcC----CCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCC
Q 009313 419 ASTKPYIPDYKLAFEHFCVHA----ASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGD 494 (537)
Q Consensus 419 ~gl~~y~pdf~~did~~~~H~----~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd 494 (537)
+|+++ +||||++... ..+.+--.+++.||+++.-. +. --.|+++++-.+.|..+..-=+-.++.
T Consensus 117 ag~~~------~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~---~~---~~~~~gC~g~~~aL~~A~~~~~~~~~~ 184 (393)
T PLN03172 117 WGQPK------SKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVK---RF---MMYQQGCFAGGTVLRLAKDLAENNAGS 184 (393)
T ss_pred cCCCH------HHCCEEEEEccCCCcCchHHHHHHHHhCCCCCce---EE---eeeCCchHHHHHHHHHHHHHHHcCCCC
Confidence 78887 9999987432 24455556899999976411 00 134677787788886543311123456
Q ss_pred EEEEEE
Q 009313 495 RVWQIA 500 (537)
Q Consensus 495 ~Vllia 500 (537)
+|++++
T Consensus 185 ~vLVV~ 190 (393)
T PLN03172 185 RVLVVC 190 (393)
T ss_pred eEEEEE
Confidence 666554
No 234
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=46.49 E-value=60 Score=34.76 Aligned_cols=45 Identities=11% Similarity=0.133 Sum_probs=30.4
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCccHHHHHHHHcCC
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVN-CSIFNPTPSLSAMIINHYKM 246 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~-ss~~~~~Ps~a~~I~~~lGl 246 (537)
...+++++|+++|++++|||.+... +++..-...-...+.+-||.
T Consensus 281 ~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~d~~E~~al~~~~~~ 326 (424)
T smart00825 281 QARLIRQALARAGVDPADVDYVEAHGTGTPLGDPIEAEALAAVFGQ 326 (424)
T ss_pred HHHHHHHHHHHhCCCHHHccEEEeeCCCCCCCCHHHHHHHHHHHhc
Confidence 4678999999999999999998755 44322122223445566654
No 235
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=46.43 E-value=47 Score=35.48 Aligned_cols=41 Identities=17% Similarity=0.182 Sum_probs=29.1
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCccHHHHHHHHcCCC
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVN-CSIFNPTPSLSAMIINHYKMR 247 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~-ss~~~~~Ps~a~~I~~~lGl~ 247 (537)
...|++++|+++|++|+|||++-+. |. +...-...+.||+.
T Consensus 259 ~~~a~~~al~~Agi~~~DiD~~ei~d~f-----t~~~l~~le~lGl~ 300 (385)
T PRK12578 259 TQLAARQAYNMAKVTPNDIEVATVHDAF-----TIAEIMGYEDLGFT 300 (385)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCcC-----hHHHHHHHHHcCCC
Confidence 3579999999999999999997533 32 23344455667764
No 236
>COG4126 Hydantoin racemase [Amino acid transport and metabolism]
Probab=46.24 E-value=84 Score=31.30 Aligned_cols=93 Identities=13% Similarity=0.243 Sum_probs=59.3
Q ss_pred HHHHHHcCCceeEEccCCccccccccchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHH
Q 009313 163 RRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIIN 242 (537)
Q Consensus 163 ~~i~~~sGI~~r~~~~~~~~~~p~~~~~ma~~~~ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~ 242 (537)
+.+.++.|+.+.+..-.... . +-.++..-.++++.+....+++++++-| .|+++.+|... -.++.+++.
T Consensus 126 ~~lv~~~g~s~~~~~vrstd-l--~vL~l~~~~~~~~~~l~~~~~~a~~edg-----AeaIiLGCAGm---s~la~~Lq~ 194 (230)
T COG4126 126 EELVRSYGLSRHCRSVRSTD-L--PVLALEGPPEEAEALLVIEAAEALKEDG-----AEAIILGCAGM---SDLADQLQK 194 (230)
T ss_pred HHHHHhcCccccccceeeCC-C--CcccccCChHHHHHHHHHHHHHHhhhcC-----CCEEEEcCccH---HHHHHHHHH
Confidence 34556666666554211111 1 2334544567788888888888887644 78899998753 356899999
Q ss_pred HcCCCCCeeEEEecCccchHHHHHHHHHHHHHHcC
Q 009313 243 HYKMRGNIISYNLGGMGCSAGVIGVDLARDMLQAN 277 (537)
Q Consensus 243 ~lGl~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g 277 (537)
.+|++ . +.| -..|+.+|..+++.+
T Consensus 195 ~~gvP----V--IDg-----v~Aav~~a~~L~~~~ 218 (230)
T COG4126 195 AFGVP----V--IDG-----VAAAVKLAEGLLGMG 218 (230)
T ss_pred HhCCC----c--ccc-----hHHHHHHHHHHHhhc
Confidence 99965 1 232 245677777777765
No 237
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=46.16 E-value=46 Score=37.19 Aligned_cols=37 Identities=14% Similarity=0.246 Sum_probs=30.8
Q ss_pred hhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCC
Q 009313 194 GRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSIFN 231 (537)
Q Consensus 194 ~~~ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~ 231 (537)
.+...+.+. .+++++|+++|++++|||.+.++..|+.
T Consensus 45 ~~~H~~~l~-~~i~~~l~~~~~~~~~id~iav~~gPg~ 81 (535)
T PRK09605 45 AEHHAEAIP-KVIKEALEEAGLKPEDIDLVAFSQGPGL 81 (535)
T ss_pred HHHHHHHHH-HHHHHHHHHcCCCHhhCCEEEECCCCCc
Confidence 455666555 8999999999999999999998888764
No 238
>PRK06158 thiolase; Provisional
Probab=45.56 E-value=62 Score=34.63 Aligned_cols=24 Identities=13% Similarity=0.252 Sum_probs=21.0
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEE
Q 009313 202 MFGALDELFEKTKVRPKDVGILVV 225 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~ 225 (537)
...|++++++++|++|+|||++=+
T Consensus 256 ~~~aa~~A~~~AGi~p~DId~~El 279 (384)
T PRK06158 256 AAESGPRAFAMAGLTPADIDVVEL 279 (384)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEe
Confidence 367999999999999999998743
No 239
>PLN03170 chalcone synthase; Provisional
Probab=45.48 E-value=73 Score=34.43 Aligned_cols=70 Identities=16% Similarity=0.060 Sum_probs=43.7
Q ss_pred cCCCCCCcCccccccEEEEcC--C--CHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCC
Q 009313 419 ASTKPYIPDYKLAFEHFCVHA--A--SKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGD 494 (537)
Q Consensus 419 ~gl~~y~pdf~~did~~~~H~--~--g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd 494 (537)
+|+++ +||||++.-. + .+..--.+++.||+++.-. +.. -.|+++++-.+.|..+..-=+-.++.
T Consensus 121 ag~~~------~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~---r~~---d~~~gC~G~~~aL~~A~~l~~~~~~~ 188 (401)
T PLN03170 121 WGQPK------SKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVN---RLM---MYQQGCFAGGTVLRVAKDLAENNRGA 188 (401)
T ss_pred cCCCH------HHCCEEEEEccCCCCCChHHHHHHHHhCcCcccH---HHH---hhcChhHHHHHHHHHHHHHHHcCCCC
Confidence 78887 9999986432 2 3455557899999987521 111 34677777777876543311123566
Q ss_pred EEEEEE
Q 009313 495 RVWQIA 500 (537)
Q Consensus 495 ~Vllia 500 (537)
+|++++
T Consensus 189 ~vLVV~ 194 (401)
T PLN03170 189 RVLVVC 194 (401)
T ss_pred eEEEEE
Confidence 777663
No 240
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=45.40 E-value=45 Score=36.14 Aligned_cols=76 Identities=12% Similarity=0.035 Sum_probs=44.7
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCccHHHHHHHHcCCC--CCeeEEE----ecCccchHHHHHHHHHHHHH
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVN-CSIFNPTPSLSAMIINHYKMR--GNIISYN----LGGMGCSAGVIGVDLARDML 274 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~-ss~~~~~Ps~a~~I~~~lGl~--~~~~~~~----l~g~gCs~gl~AL~lA~~lL 274 (537)
...|++++|+++|++|+|||.+-.. |.+..--+.-+.-|.+-||-. ..++.-. ++....++|+..+-.+...|
T Consensus 280 ~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~al~~~fg~~~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l 359 (414)
T PRK08722 280 GALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVMSL 359 (414)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEccCccCCCCCHHHHHHHHHHhcccCCCCceeeCcccccccchHHHHHHHHHHHHHHH
Confidence 4778999999999999999988543 544333444456677777632 1232222 22233444554544444555
Q ss_pred HcC
Q 009313 275 QAN 277 (537)
Q Consensus 275 ~~g 277 (537)
+.+
T Consensus 360 ~~~ 362 (414)
T PRK08722 360 VDQ 362 (414)
T ss_pred hcC
Confidence 554
No 241
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=43.89 E-value=43 Score=36.43 Aligned_cols=44 Identities=14% Similarity=0.169 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEE-eccCCCCCccHHHHHHHHcC
Q 009313 202 MFGALDELFEKTKVRPKDVGILVV-NCSIFNPTPSLSAMIINHYK 245 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~-~ss~~~~~Ps~a~~I~~~lG 245 (537)
+.+|.+.||+++|++|+|||.+-. .|++..-...-+.-|..-||
T Consensus 278 a~~am~~AL~~Agl~~~~idYinaHgTsT~~nD~~E~~ai~~vfg 322 (412)
T COG0304 278 AIRAMRAALADAGLTPEDIDYINAHGTSTPANDKAESLAIKRVFG 322 (412)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCCCccCCCccHHHHHHHHHHhc
Confidence 478999999999999999999874 46654444555556666666
No 242
>PLN00415 3-ketoacyl-CoA synthase
Probab=43.78 E-value=77 Score=35.08 Aligned_cols=70 Identities=7% Similarity=0.086 Sum_probs=42.4
Q ss_pred cCCCCCCcCccccccEEEEcCCC----HHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCC
Q 009313 419 ASTKPYIPDYKLAFEHFCVHAAS----KTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGD 494 (537)
Q Consensus 419 ~gl~~y~pdf~~did~~~~H~~g----~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd 494 (537)
+|+++ +|||+++....+ +..--.+.+++|++++ +. +. ..+.+|++.-.+.|..+.+-=+..++.
T Consensus 149 aGi~p------~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~-v~--~~---dL~gmGCsggv~aL~lA~~ll~a~~~~ 216 (466)
T PLN00415 149 TGIEP------REVGIFIVNCSLFNPNPSLSSMIVNRYKLKTD-VK--TY---NLSGMGCSAGAISVDLATNLLKANPNT 216 (466)
T ss_pred cCCCH------HHCCEEEEECcCCCCCchHHHHHHHHhCCCCC-ce--EE---EeccccchHHHHHHHHHHHHHHhCCCC
Confidence 78988 999999865433 3444568999999843 32 12 245556666666665443311224566
Q ss_pred EEEEEE
Q 009313 495 RVWQIA 500 (537)
Q Consensus 495 ~Vllia 500 (537)
++++++
T Consensus 217 ~aLVVs 222 (466)
T PLN00415 217 YAVIVS 222 (466)
T ss_pred EEEEEE
Confidence 666554
No 243
>PRK07855 lipid-transfer protein; Provisional
Probab=43.76 E-value=81 Score=33.85 Aligned_cols=24 Identities=13% Similarity=0.249 Sum_probs=21.0
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEe
Q 009313 203 FGALDELFEKTKVRPKDVGILVVN 226 (537)
Q Consensus 203 ~~Aa~~aL~~agi~~~dId~LI~~ 226 (537)
..|++++++++|++++|||++=+.
T Consensus 269 ~~aa~~a~~~AGi~~~DiDv~El~ 292 (386)
T PRK07855 269 GLVARQLWAQSGLGPADIDTAILY 292 (386)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEec
Confidence 479999999999999999998543
No 244
>KOG2707 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=43.70 E-value=56 Score=34.77 Aligned_cols=48 Identities=13% Similarity=0.135 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCc-----cHHHHHHHHcCCC
Q 009313 200 MVMFGALDELFEKTKVRPKDVGILVVNCSIFNPTP-----SLSAMIINHYKMR 247 (537)
Q Consensus 200 ~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~P-----s~a~~I~~~lGl~ 247 (537)
+..-.+++++|+++|..|+|+|++-|...|+.+.+ +.|-.++.++..+
T Consensus 84 ~ni~~~iqral~aa~~~p~dldaIAVT~gPGl~lsL~vGl~fA~glA~~l~kP 136 (405)
T KOG2707|consen 84 ENIPRLIQRALDAAGLSPKDLDAIAVTRGPGLPLSLKVGLSFAKGLAVKLQKP 136 (405)
T ss_pred HHHHHHHHHHHHHcCCCcccceeEEEecCCCceeehhhhHHHHHHHHHhccCC
Confidence 34577889999999999999999998888776544 4455666666553
No 245
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=42.83 E-value=42 Score=36.26 Aligned_cols=45 Identities=13% Similarity=0.148 Sum_probs=33.4
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCccHHHHHHHHcCC
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVN-CSIFNPTPSLSAMIINHYKM 246 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~-ss~~~~~Ps~a~~I~~~lGl 246 (537)
...+++++|+++|++|+|||.+... |++..--+.-+..|.+.||-
T Consensus 277 ~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg~ 322 (405)
T PRK09116 277 MQIAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFGA 322 (405)
T ss_pred HHHHHHHHHHHhCCCHHHcCEEECcCccCCCCCHHHHHHHHHHhCC
Confidence 3688999999999999999988744 54433345556667778873
No 246
>PRK07937 lipid-transfer protein; Provisional
Probab=42.83 E-value=79 Score=33.57 Aligned_cols=78 Identities=12% Similarity=0.005 Sum_probs=44.6
Q ss_pred HHHHHHHHHh-CCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecCc-------cchHHHHHHHHHHHHH
Q 009313 203 FGALDELFEK-TKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGM-------GCSAGVIGVDLARDML 274 (537)
Q Consensus 203 ~~Aa~~aL~~-agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~-------gCs~gl~AL~lA~~lL 274 (537)
..++++++++ +|++|+|||++=+. ...+...-+..+.||+.++ ..+|.+|- ||+|....++++.+|.
T Consensus 249 ~~~~~~a~~~aAgi~~~diD~~Ei~----D~F~~~~l~~~e~lGl~g~-~pvN~~GG~l~ghp~gatG~~~~~e~~~QL~ 323 (352)
T PRK07937 249 SPSTALAAEAATGGDAGGVDVAELH----APFTHQELILREALGLGDK-TKVNPSGGALAANPMFAAGLERIGEAARHIW 323 (352)
T ss_pred HHHHHHHHHHhcCCCHHHCCEEEEe----CCChHHHHHHHHHcCCCCC-CCcCCCccchhcCchhHHHHHHHHHHHHHHh
Confidence 3444555555 59999999988433 1234444556778888532 35565552 4545455555555554
Q ss_pred HcCCCCeEEEEE
Q 009313 275 QANPNNYAVVVS 286 (537)
Q Consensus 275 ~~g~~~~aLVVs 286 (537)
.. ..+++|+.+
T Consensus 324 g~-~a~~~l~~~ 334 (352)
T PRK07937 324 DG-SARRALAHA 334 (352)
T ss_pred cc-CCCEEEEec
Confidence 33 345566543
No 247
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=42.40 E-value=43 Score=36.05 Aligned_cols=44 Identities=16% Similarity=0.055 Sum_probs=31.6
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCccHHHHHHHHcC
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVN-CSIFNPTPSLSAMIINHYK 245 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~-ss~~~~~Ps~a~~I~~~lG 245 (537)
...|++++|+++|++|+|||.+-.. |.+..-.+.-...+.+.||
T Consensus 290 ~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 334 (424)
T PRK06333 290 ARRAMLIALRQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFG 334 (424)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEeccCCCCccchHHHHHHHHHHhC
Confidence 4789999999999999999998643 4433223344556777776
No 248
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=42.26 E-value=55 Score=34.85 Aligned_cols=77 Identities=13% Similarity=0.193 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCccHHHHHHHHcCCCC----CeeE----EEecCccchHHHHHHHHHH
Q 009313 201 VMFGALDELFEKTKVRPKDVGILVVN-CSIFNPTPSLSAMIINHYKMRG----NIIS----YNLGGMGCSAGVIGVDLAR 271 (537)
Q Consensus 201 l~~~Aa~~aL~~agi~~~dId~LI~~-ss~~~~~Ps~a~~I~~~lGl~~----~~~~----~~l~g~gCs~gl~AL~lA~ 271 (537)
-...+++++|+++|++++|||.+... +.+....+.-..-|.+-|+-.. .++. -.++....++|+..+-.+.
T Consensus 280 ~~~~a~~~al~~Agi~~~did~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~~~ 359 (421)
T cd00833 280 AQAALIRRAYARAGVDPSDIDYVEAHGTGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVV 359 (421)
T ss_pred HHHHHHHHHHHHhCCCHHHCcEEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHHHHH
Confidence 34789999999999999999998755 4332222222334455444320 1111 1233344555666666666
Q ss_pred HHHHcC
Q 009313 272 DMLQAN 277 (537)
Q Consensus 272 ~lL~~g 277 (537)
..|+.+
T Consensus 360 ~~l~~~ 365 (421)
T cd00833 360 LALEHG 365 (421)
T ss_pred HHHhcC
Confidence 666654
No 249
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=41.50 E-value=35 Score=29.99 Aligned_cols=60 Identities=17% Similarity=0.149 Sum_probs=33.7
Q ss_pred cCCCCCCcCccccccEEEEcCCCHHHHHHHH-----HHcCCChh--hhhhhhhccccccccccchHHHHHHHHH
Q 009313 419 ASTKPYIPDYKLAFEHFCVHAASKTVLDELQ-----KNLELSEK--NMEASRMTLHRFGNTSSSSIWYELAYLE 485 (537)
Q Consensus 419 ~gl~~y~pdf~~did~~~~H~~g~~vl~~l~-----~~Lgl~~e--~~~~S~~~l~r~GNtsSaSi~~~La~~~ 485 (537)
+++++ +|||++..|..|....|..+ +.++-... .+.- -..=..+||+.+++-.+.|....
T Consensus 38 agi~~------~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v-~s~K~~~Gh~~~asG~~~l~~~~ 104 (119)
T PF02801_consen 38 AGISP------EDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPV-GSVKSNIGHTEAASGLLSLAKAL 104 (119)
T ss_dssp HTS-G------GGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEE-E-THHHH-B-GGGHHHHHHHHHH
T ss_pred hcccc------ccceeeeeeccccccchhhhhhhhhhhhcccccccccce-eccccccccccccchHHHHHHHH
Confidence 78987 99999999999988877654 33443221 1110 12233589999999998887543
No 250
>PLN03171 chalcone synthase-like protein; Provisional
Probab=41.34 E-value=88 Score=33.75 Aligned_cols=70 Identities=19% Similarity=0.061 Sum_probs=40.9
Q ss_pred cCCCCCCcCccccccEEEEcCC----CHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCC
Q 009313 419 ASTKPYIPDYKLAFEHFCVHAA----SKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGD 494 (537)
Q Consensus 419 ~gl~~y~pdf~~did~~~~H~~----g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd 494 (537)
+|+++ +|||+++.... .+..--.+++.||++..-. +. . +-+.++++-.+.|..+..-=+-.+..
T Consensus 123 ag~~~------~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~---~~--~-~~~~gC~g~~~aL~~A~~li~~~~~~ 190 (399)
T PLN03171 123 WGRPA------ADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVR---RT--M-LHLNGCFAGAAALRLAKDLAENNRGA 190 (399)
T ss_pred cCCCH------HHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccc---ee--e-ccCCccHHHHHHHHHHHHHHHhCCCC
Confidence 78887 99999987221 2334446899999975421 11 1 23348888888887653310112344
Q ss_pred EEEEEE
Q 009313 495 RVWQIA 500 (537)
Q Consensus 495 ~Vllia 500 (537)
+|++++
T Consensus 191 ~vLVv~ 196 (399)
T PLN03171 191 RVLVVA 196 (399)
T ss_pred eEEEEE
Confidence 555543
No 251
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=41.20 E-value=68 Score=28.71 Aligned_cols=52 Identities=13% Similarity=0.165 Sum_probs=36.4
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCC--CCCccHHHHHHHHc-CCCCCeeEEEecC
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVNCSIF--NPTPSLSAMIINHY-KMRGNIISYNLGG 257 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ss~~--~~~Ps~a~~I~~~l-Gl~~~~~~~~l~g 257 (537)
..+-.++.+++.+++++||--++++.++| ...|+ ..++++ |+. +++-++...
T Consensus 22 t~eLl~~ii~~N~l~~edivSv~FT~T~DL~a~FPA---~aaR~~~Gw~-~Vplmc~qE 76 (117)
T TIGR01796 22 VAELLTELMERNELTPEDLISVIFTVTEDLHADFPA---AAARGLPGWT-DVPVMCAQE 76 (117)
T ss_pred HHHHHHHHHHHcCCCHHHEEEEEEEecCcccccChH---HHHHhccCCC-CcceeccCc
Confidence 34445566788999999999999887764 44664 445566 886 677666554
No 252
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=40.92 E-value=1.1e+02 Score=32.69 Aligned_cols=24 Identities=8% Similarity=0.192 Sum_probs=20.3
Q ss_pred HHHHHHHHHHhCCCC--CCCccEEEE
Q 009313 202 MFGALDELFEKTKVR--PKDVGILVV 225 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~--~~dId~LI~ 225 (537)
...|++++++++|++ ++|||++=+
T Consensus 257 ~~~a~~~a~~~Agi~~p~~Did~~el 282 (386)
T PRK08313 257 GRDAAAALWKAAGITDPRDEIDVAEI 282 (386)
T ss_pred HHHHHHHHHHHcCCCCChhhCCEEEe
Confidence 457999999999997 699998743
No 253
>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5.4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....
Probab=40.75 E-value=58 Score=29.22 Aligned_cols=54 Identities=11% Similarity=0.172 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCC--CCCccHHHHHHHHc-CCCCCeeEEEec
Q 009313 199 SMVMFGALDELFEKTKVRPKDVGILVVNCSIF--NPTPSLSAMIINHY-KMRGNIISYNLG 256 (537)
Q Consensus 199 ~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~~--~~~Ps~a~~I~~~l-Gl~~~~~~~~l~ 256 (537)
.+-..+-.++.+++.+++++||-.++++.++| ...|+.+ ++++ |+. +++-+...
T Consensus 19 ~~at~eLl~~i~~~N~l~~~dIvSi~FT~T~DL~a~fPA~a---~R~~~g~~-~Vpl~c~~ 75 (118)
T PF07736_consen 19 LEATRELLEEILERNELSPEDIVSIIFTVTPDLDAAFPAAA---ARELPGWD-DVPLMCAQ 75 (118)
T ss_dssp HHHHHHHHHHHHHHTT--GGGEEEEEEEE-TT--SS-TCHH---HHHTTTGT-TSEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHEEEEEEEeCCCcCccChHHH---HHccCCCC-ccceeccC
Confidence 33345556677788999999999999998764 4567544 3344 665 45544444
No 254
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=40.45 E-value=59 Score=35.30 Aligned_cols=45 Identities=13% Similarity=0.006 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEE-eccCCCCCccHHHHHHHHcCC
Q 009313 202 MFGALDELFEKTKVRPKDVGILVV-NCSIFNPTPSLSAMIINHYKM 246 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~-~ss~~~~~Ps~a~~I~~~lGl 246 (537)
...+++++|+++|++|+|||.+-. +|++..-.+.-+..|.+-||-
T Consensus 288 ~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~Al~~~fg~ 333 (418)
T PRK07910 288 AGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAEGKAINNALGG 333 (418)
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCCCHHHHHHHHHHhCC
Confidence 478899999999999999999864 354433345556667777774
No 255
>COG1153 FwdD Formylmethanofuran dehydrogenase subunit D [Energy production and conversion]
Probab=39.09 E-value=29 Score=31.13 Aligned_cols=50 Identities=26% Similarity=0.355 Sum_probs=33.8
Q ss_pred chHHHHHHHHHHcCCCCCCCEEEEEE-EchHHHhhheeEEEeccCC-CCC-----CCCcccccc
Q 009313 475 SSIWYELAYLEAKERVKRGDRVWQIA-FGSGFKCNSVVWQAMRRVK-KPA-----RNPWLDCVD 531 (537)
Q Consensus 475 aSi~~~La~~~~~g~l~~Gd~Vllia-fGsG~~~~s~v~r~~~~~~-~~~-----~~~w~~~~~ 531 (537)
|.++++=+++.+-| ++.||+|.+-+ || .+|+++-..-. ++. .+||++++-
T Consensus 31 a~~~inp~D~~~Lg-v~EGD~VkVkse~G------eVVV~Ak~~~~~~pG~vfiPmgpWaN~vi 87 (128)
T COG1153 31 AVCEINPEDMKQLG-VSEGDKVKVKSEFG------EVVVKAKEADGVQPGMVFIPMGPWANVVI 87 (128)
T ss_pred eEEEECHHHHHHhC-CCcCCeEEEEecCc------cEEEEEeeCCCCCCCeEEecCCcccceee
Confidence 44455555555554 68999999988 77 57888776542 112 589999863
No 256
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=38.76 E-value=1.2e+02 Score=32.61 Aligned_cols=42 Identities=14% Similarity=0.180 Sum_probs=29.6
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCC
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMR 247 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~ 247 (537)
...|++++++++|++++|||++-+. ...+...-+..+.||+.
T Consensus 278 ~~~aa~~a~~~Agi~~~Didv~el~----D~fa~~~l~~le~lGl~ 319 (403)
T PRK06289 278 VRQAVLDAYRRAGVGLDDLDGFEVH----DCFTPSEYLAIDHIGLT 319 (403)
T ss_pred HHHHHHHHHHHcCCCHHHCeEEeee----ccchHHHHHHHHHcCCC
Confidence 3579999999999999999997543 11233344555667764
No 257
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=37.78 E-value=1.3e+02 Score=32.93 Aligned_cols=24 Identities=17% Similarity=0.264 Sum_probs=20.6
Q ss_pred HHHHHHHHHhCCCC--CCCccEEEEe
Q 009313 203 FGALDELFEKTKVR--PKDVGILVVN 226 (537)
Q Consensus 203 ~~Aa~~aL~~agi~--~~dId~LI~~ 226 (537)
..|++++++++|++ ++|||++=+.
T Consensus 296 ~~a~~~a~~~AGl~~~~~DiD~~Ei~ 321 (430)
T PRK06365 296 RMAAKEAYEMAGITDPLNDLDLIELH 321 (430)
T ss_pred HHHHHHHHHHcCCCCCHHHCCEEEee
Confidence 57999999999997 7999988543
No 258
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=37.61 E-value=1.4e+02 Score=31.50 Aligned_cols=90 Identities=16% Similarity=0.214 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCC--C---C--eeEEE------ec--CccchHHHH
Q 009313 201 VMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMR--G---N--IISYN------LG--GMGCSAGVI 265 (537)
Q Consensus 201 l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~--~---~--~~~~~------l~--g~gCs~gl~ 265 (537)
-++..+.+=|+++|.+|+|-|++|.+- ....--.+...+..+-|+. . | ..-|| -+ |-|||+.+.
T Consensus 203 aa~dti~~h~~d~~~~~~~yd~i~tgd-lg~vg~~i~~~ll~~~g~~~~~~~~dcg~~iy~~~~~~~aggsgc~csa~v~ 281 (327)
T TIGR02845 203 AAADTIEAHFKDTGRSVDDYDLIVTGD-LARVGSEILRKLLKERGYDVTERYDDCGVMIYRPDQQVFAGGSGCACSAVVT 281 (327)
T ss_pred HHHHHHHHHHHHcCCChhhccEEEecc-hHHHHHHHHHHHHHHcCCChhhccccCCeEEEcCCCcccCCCcccchhHHHH
Confidence 356667777899999999999988542 1111122233333333331 0 1 12332 22 345555544
Q ss_pred HHHHHHHHHHcCCCCeEEEEEecc-ccc
Q 009313 266 GVDLARDMLQANPNNYAVVVSTEM-VGY 292 (537)
Q Consensus 266 AL~lA~~lL~~g~~~~aLVVs~E~-~S~ 292 (537)
.=.+ ...|+.+..+++|+|++-. +|+
T Consensus 282 ~~~~-~~~~~~g~~~r~l~v~tgalls~ 308 (327)
T TIGR02845 282 YGHI-LKEMLRGKLKKVLVVATGALLSP 308 (327)
T ss_pred HHHH-HHHHhcCcceEEEEEEchhhcCc
Confidence 4333 3445567789999999876 344
No 259
>PLN02192 3-ketoacyl-CoA synthase
Probab=37.01 E-value=1.2e+02 Score=33.94 Aligned_cols=70 Identities=13% Similarity=0.152 Sum_probs=44.1
Q ss_pred cCCCCCCcCccccccEEEEcC----CCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCC
Q 009313 419 ASTKPYIPDYKLAFEHFCVHA----ASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGD 494 (537)
Q Consensus 419 ~gl~~y~pdf~~did~~~~H~----~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd 494 (537)
+|++| +|||+++... ..+..-..+++++|+..+ +. . ...+-++++.-.+.|+.+..-=+..++.
T Consensus 191 aGi~p------~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~-i~----a-fdLsgmGCSggl~aLdlA~~lL~a~~~~ 258 (511)
T PLN02192 191 TSVKP------KDIGILIVNCSLFNPTPSLSAMVINHYKLRGN-IL----S-YNLGGMGCSAGLISIDLAKHLLQVHPNS 258 (511)
T ss_pred cCCCH------HHCCEEEEECCCCCCCchHHHHHHHHhCCCCC-ce----E-EEcccchhhhHHHHHHHHHHHHHcCCCC
Confidence 89998 9999988643 345666779999999743 21 1 2245566666677776543321223566
Q ss_pred EEEEEE
Q 009313 495 RVWQIA 500 (537)
Q Consensus 495 ~Vllia 500 (537)
++++++
T Consensus 259 ~aLVVs 264 (511)
T PLN02192 259 YALVIS 264 (511)
T ss_pred eEEEEE
Confidence 666655
No 260
>PLN02932 3-ketoacyl-CoA synthase
Probab=36.30 E-value=1.2e+02 Score=33.84 Aligned_cols=54 Identities=11% Similarity=0.178 Sum_probs=36.9
Q ss_pred cCCCCCCcCccccccEEEEcC----CCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHH
Q 009313 419 ASTKPYIPDYKLAFEHFCVHA----ASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYL 484 (537)
Q Consensus 419 ~gl~~y~pdf~~did~~~~H~----~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~ 484 (537)
+|++| +|||+++... ..+..--.++++||++++-. ..+ .+-++++.-++.|+.+
T Consensus 163 agi~p------~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~---~fd---L~gmGCSggl~aL~lA 220 (478)
T PLN02932 163 TGISP------SDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIK---SLN---LGGMGCSAGVIAIDAA 220 (478)
T ss_pred cCCCH------HHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCce---EEE---eccchhhhHHHHHHHH
Confidence 89998 9999997643 34556667899999975422 122 4556777777777654
No 261
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=34.54 E-value=77 Score=34.64 Aligned_cols=24 Identities=8% Similarity=0.077 Sum_probs=20.9
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEe
Q 009313 203 FGALDELFEKTKVRPKDVGILVVN 226 (537)
Q Consensus 203 ~~Aa~~aL~~agi~~~dId~LI~~ 226 (537)
..|++++++++|++++|||++=++
T Consensus 314 ~~a~~~al~~Agl~~~Did~~Ei~ 337 (430)
T TIGR02446 314 SYATPLALQRAGLALSDLTLIDMH 337 (430)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEec
Confidence 468999999999999999988543
No 262
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=34.29 E-value=1.9e+02 Score=31.05 Aligned_cols=42 Identities=5% Similarity=0.085 Sum_probs=27.8
Q ss_pred HHHHHHHHHHhCCCC--CCCccEEEEeccCCCCCccHHHHHHHHcCCC
Q 009313 202 MFGALDELFEKTKVR--PKDVGILVVNCSIFNPTPSLSAMIINHYKMR 247 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~--~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~ 247 (537)
...|++++++++|++ ++|||++=+. .......-...+.||+.
T Consensus 268 ~~~aa~~a~~~AGl~~~~~Did~~Ei~----D~Fs~~~l~~~e~lGl~ 311 (398)
T PRK06157 268 TRIAARKAYREAGITDPREELSMAEVH----DCFSITELVTMEDLGLS 311 (398)
T ss_pred HHHHHHHHHHHcCCCCchhcCCEEEEe----cCChHHHHHHHHHcCCC
Confidence 357899999999997 7999987433 11222334445566654
No 263
>PLN02377 3-ketoacyl-CoA synthase
Probab=33.78 E-value=1.4e+02 Score=33.52 Aligned_cols=53 Identities=9% Similarity=0.170 Sum_probs=34.1
Q ss_pred cCCCCCCcCccccccEEEEcC----CCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHH
Q 009313 419 ASTKPYIPDYKLAFEHFCVHA----ASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAY 483 (537)
Q Consensus 419 ~gl~~y~pdf~~did~~~~H~----~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~ 483 (537)
+|+++ +|||+++... ..+..--.++++||+.++-. .+. .+-++++.-.+.|+.
T Consensus 187 aGi~p------~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~-----afd-L~gmGCsggl~aL~l 243 (502)
T PLN02377 187 TNVNP------KDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIR-----SFN-LGGMGCSAGVIAVDL 243 (502)
T ss_pred cCCCH------HHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCe-----EEe-cccchhhHHHHHHHH
Confidence 89998 9999998832 34566678999999975422 122 233455555555543
No 264
>PRK00768 nadE NAD synthetase; Reviewed
Probab=33.73 E-value=5.4e+02 Score=26.37 Aligned_cols=151 Identities=15% Similarity=0.134 Sum_probs=76.0
Q ss_pred HHHHHHHHhccCCCChh-----hHHHHHHHHHHcCCceeEEccCCccccccccchhhhhhhhHHHHHHHHHHHHHHhCCC
Q 009313 141 REQFIEVAGKWSKSDEA-----SLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMVMFGALDELFEKTKV 215 (537)
Q Consensus 141 ~e~~~e~~~~~~~~~~~-----~~~f~~~i~~~sGI~~r~~~~~~~~~~p~~~~~ma~~~~ea~~l~~~Aa~~aL~~agi 215 (537)
++++++.++....++.+ -.+|++.-++++|.+.- ++.-+-. -++.+. ..-+.+++..-+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~l~~~g~~g~-VlGlSGG----IDSav~----------a~L~~~A~~~~~~ 67 (268)
T PRK00768 3 QQEIIAELGVKPTIDPEEEIRRRVDFLKDYLKKSGLKSL-VLGISGG----QDSTLA----------GRLAQLAVEELRA 67 (268)
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHcCCCeE-EEECCCC----HHHHHH----------HHHHHHHHHHhcc
Confidence 45666666554444432 24577777888886653 3332211 233332 2223445543332
Q ss_pred CCCCccE-EEEeccCCC--CCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHH--------HHHHHHc--------
Q 009313 216 RPKDVGI-LVVNCSIFN--PTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVDL--------ARDMLQA-------- 276 (537)
Q Consensus 216 ~~~dId~-LI~~ss~~~--~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~l--------A~~lL~~-------- 276 (537)
.-...+. ++..+.|.. .....+..+++.+|+. +...++|. .-..++...+.. |..-+++
T Consensus 68 ~~~~~~~~~~~l~mP~~~~~~~~da~~la~~lgi~-~~~~i~I~-~~~~~~~~~l~~~~~~~~~~a~~NiqARlRm~~Ly 145 (268)
T PRK00768 68 ETGDDDYQFIAVRLPYGVQADEDDAQDALAFIQPD-RVLTVNIK-PAVDASVAALEAAGIELSDFVKGNIKARERMIAQY 145 (268)
T ss_pred cccCcceeEEEEECCCCCcCCHHHHHHHHHhcCCC-eeEEEECH-HHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHH
Confidence 1111112 222244432 2245678899999994 36888888 466666554421 2111111
Q ss_pred --CCCCeEEEEEecccccccCCCCCcCCCccccccccceEEE
Q 009313 277 --NPNNYAVVVSTEMVGYNWYAGRDRSMMIPNCFFRMGCSAI 316 (537)
Q Consensus 277 --g~~~~aLVVs~E~~S~~~~~~~dr~~ll~~~lfgDGAAAv 316 (537)
......||+++.+.|..+ -| -.+.+|||++.+
T Consensus 146 ~~An~~~~lvlgT~N~sE~~-~G-------y~TkyGD~~~d~ 179 (268)
T PRK00768 146 AIAGATGGLVVGTDHAAEAV-TG-------FFTKFGDGGADI 179 (268)
T ss_pred HHHccCCCEEEcCCcccHHH-hC-------ceeccCCccccc
Confidence 112345777777766521 11 135678888766
No 265
>PRK08304 stage V sporulation protein AD; Validated
Probab=33.49 E-value=2.1e+02 Score=30.28 Aligned_cols=89 Identities=19% Similarity=0.231 Sum_probs=52.0
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCC-----CC--eeEEEe---------cCccchHHHH
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMR-----GN--IISYNL---------GGMGCSAGVI 265 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~-----~~--~~~~~l---------~g~gCs~gl~ 265 (537)
++..+.+=|+++|.+|+|-|++|.+- ....--.+...+..+-|+. .| +.-||. +|-|||+.+.
T Consensus 210 a~dti~~h~~d~~~~~~~yDli~tGD-lg~vG~~i~~~ll~~~g~~~~~~~~DcG~~iy~~~~q~~~aGgSGc~csa~v~ 288 (337)
T PRK08304 210 AADTIQQHFKDTGRSPEDYDLIVTGD-LGRVGREILKELLKEEGYDIGDNYNDCGLMIYDSEQQDVFAGGSGCACSAVVT 288 (337)
T ss_pred HHHHHHHHHHHcCCChhhccEEEEcc-hHHHHHHHHHHHHHHhCCChhhcccccCeEEeccCCCcccCCCcccchhHHHH
Confidence 56666777899999999999988542 1111122333344443431 01 244542 2346666554
Q ss_pred HHHHHHHHHHcCCCCeEEEEEeccc-cc
Q 009313 266 GVDLARDMLQANPNNYAVVVSTEMV-GY 292 (537)
Q Consensus 266 AL~lA~~lL~~g~~~~aLVVs~E~~-S~ 292 (537)
.=.+ ...|+.+..+++|+|++-.+ |+
T Consensus 289 ~~~~-~~~~~~g~~~rvl~v~tGaLls~ 315 (337)
T PRK08304 289 YGYL-LKELQKGKLKRVLVVATGALLSP 315 (337)
T ss_pred HHHH-HHHHhcCCceEEEEEEchhhcCc
Confidence 4444 34455677899999998763 44
No 266
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=32.86 E-value=92 Score=33.93 Aligned_cols=44 Identities=11% Similarity=0.116 Sum_probs=28.8
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCccHHHHHHHHcC
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVN-CSIFNPTPSLSAMIINHYK 245 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~-ss~~~~~Ps~a~~I~~~lG 245 (537)
...|++++|+++|++|+|||.+-.. +.+..-.+.-..-+..-+|
T Consensus 301 ~~~a~~~Al~~Agi~~~dId~ve~hgtgt~~~D~~E~~ai~~~~~ 345 (437)
T PLN02836 301 AVLAMTRALQQSGLHPNQVDYVNAHATSTPLGDAVEARAIKTVFS 345 (437)
T ss_pred HHHHHHHHHHHcCCCHhHcCEEEccCCcCcCcCHHHHHHHHHHhc
Confidence 4678999999999999999998644 4332222332333444444
No 267
>cd02185 AroH Chorismate mutase (AroH) is one of at least five chorismate-utilizing enzymes present in microorganisms that catalyze the rearrangement of chorismate to prephenic acid, the first committed step in the biosynthesis of aromatic amino acids. In prokaryotes, chorismate mutase may be fused to prephenate dehydratase, prephenate dehydrogenase, or 3-deoxy-D-arabino-heptulosonat-7-phosphate (DAHP) as part of a bifunctional enzyme. The AroH domain forms a homotrimer with three-fold symmetry.
Probab=30.96 E-value=1.3e+02 Score=26.88 Aligned_cols=53 Identities=11% Similarity=0.133 Sum_probs=35.0
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCC--CCCccHHHHHHHHcCCCCCeeEEEecC
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVNCSIF--NPTPSLSAMIINHYKMRGNIISYNLGG 257 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ss~~--~~~Ps~a~~I~~~lGl~~~~~~~~l~g 257 (537)
..+-.++.+++.+++++||--++++.++| ...|+ ..++++|.-.+++-++...
T Consensus 22 t~eLl~~i~~~N~l~~edivSv~FT~T~DL~a~FPA---~aaR~~~~~~~Vplmc~qE 76 (117)
T cd02185 22 TRELLEEIIERNNIKPEDIISVIFTVTPDLDAAFPA---KAARELGGWKYVPLMCAQE 76 (117)
T ss_pred HHHHHHHHHHHcCCCHHHEEEEEEEeCCcccccChH---HHHHhcCCCCCcceeecCc
Confidence 34445566788999999999999887764 44564 4555664333566655553
No 268
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=30.56 E-value=88 Score=32.76 Aligned_cols=88 Identities=18% Similarity=0.248 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCC-------eeEEEe---------cCccchHHH
Q 009313 201 VMFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGN-------IISYNL---------GGMGCSAGV 264 (537)
Q Consensus 201 l~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~-------~~~~~l---------~g~gCs~gl 264 (537)
-|+..+.+=|+++|.+|+|-|++|.+- ....--.+...+.++-|+.-. +.-||. +|-|||+.+
T Consensus 204 AA~dTI~~h~~D~g~~p~dYDlIvTGD-Lg~vG~~il~~Ll~~~G~~i~~~~~DCG~~iyd~~~Qdv~aGGSGcgCSA~V 282 (329)
T PF07451_consen 204 AAADTIEQHFKDTGRSPDDYDLIVTGD-LGKVGRKILRDLLKEKGYDISENYNDCGLMIYDPEKQDVHAGGSGCGCSAVV 282 (329)
T ss_dssp HHHHHHHHHHHHCT--GGG-SEEEESS--HHHHHHHHHHHHHHTT---GGGEEEHHHCSS-TT-S--TT-EESHHHHHHH
T ss_pred HHHHHHHHHHHHhCCChhhcCeEEecc-hHHHHHHHHHHHHHHcCCCCccccccCCeEeecCCccccccCCCCcchHHHH
Confidence 356666777899999999999998542 111111233344444444210 011221 234566555
Q ss_pred HHHHHHHHHHHcCCCCeEEEEEeccc
Q 009313 265 IGVDLARDMLQANPNNYAVVVSTEMV 290 (537)
Q Consensus 265 ~AL~lA~~lL~~g~~~~aLVVs~E~~ 290 (537)
..=.+ ...|+.|..+++|+|++-.+
T Consensus 283 ~~g~l-l~~l~~g~~krvL~vaTGAL 307 (329)
T PF07451_consen 283 LCGYL-LPKLRKGELKRVLFVATGAL 307 (329)
T ss_dssp HHHCH-HHHHHTTS-SEEEEEEEEE-
T ss_pred HHHHH-HHHHHcCCceEEEEEEchhh
Confidence 44333 34456678899999997763
No 269
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=28.45 E-value=1.5e+02 Score=31.93 Aligned_cols=24 Identities=21% Similarity=0.184 Sum_probs=20.5
Q ss_pred HHHHHHHHHhCCCC--CCCccEEEEe
Q 009313 203 FGALDELFEKTKVR--PKDVGILVVN 226 (537)
Q Consensus 203 ~~Aa~~aL~~agi~--~~dId~LI~~ 226 (537)
..|++++++++|++ ++|||++-+.
T Consensus 259 ~~Aa~~a~~~AGi~~p~~DiD~~ei~ 284 (385)
T PRK06066 259 RIAADMAYKMAGIESPRKEVDAAEVD 284 (385)
T ss_pred HHHHHHHHHHcCCCCCHHHCcEEEEe
Confidence 36999999999997 6999998654
No 270
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=28.18 E-value=52 Score=32.44 Aligned_cols=39 Identities=33% Similarity=0.403 Sum_probs=29.2
Q ss_pred ccccccchHHHHHHHHHHcCCCCCCCEEEEEEEchHHHhhh
Q 009313 469 FGNTSSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFKCNS 509 (537)
Q Consensus 469 ~GNtsSaSi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s 509 (537)
+|-|-|. |...+.+.+.=.+++||+|+=||.|+||..+.
T Consensus 51 ~gqtis~--P~~vA~m~~~L~~~~g~~VLEIGtGsGY~aAv 89 (209)
T COG2518 51 CGQTISA--PHMVARMLQLLELKPGDRVLEIGTGSGYQAAV 89 (209)
T ss_pred CCceecC--cHHHHHHHHHhCCCCCCeEEEECCCchHHHHH
Confidence 4555444 56666666666789999999999999987543
No 271
>PRK13410 molecular chaperone DnaK; Provisional
Probab=27.41 E-value=1.5e+02 Score=34.33 Aligned_cols=63 Identities=10% Similarity=0.150 Sum_probs=43.3
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHH
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVD 268 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~ 268 (537)
....++++|+++|+++++||.|+..... .-.|.+-.+|.+.+|.. ...+++..-|.+.-.|+.
T Consensus 311 ~~~~i~~~L~~ag~~~~dId~VvLVGGs-sRiP~V~~~l~~~fg~~---~~~~~npdeaVA~GAAi~ 373 (668)
T PRK13410 311 LLRPVKRALKDAGLSPEDIDEVVLVGGS-TRMPMVQQLVRTLIPRE---PNQNVNPDEVVAVGAAIQ 373 (668)
T ss_pred HHHHHHHHHHHcCCChhhCcEEEEECCc-cccHHHHHHHHHHcCCC---cccCCCCchHHHHhHHHH
Confidence 5566788999999999999988755322 23788889999999864 233444334554444443
No 272
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=27.39 E-value=2.4e+02 Score=29.33 Aligned_cols=70 Identities=6% Similarity=0.069 Sum_probs=45.2
Q ss_pred cCCCCCCcCccccccEEEEc----CCCHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCC
Q 009313 419 ASTKPYIPDYKLAFEHFCVH----AASKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGD 494 (537)
Q Consensus 419 ~gl~~y~pdf~~did~~~~H----~~g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd 494 (537)
.|++| +|||-++.+ .+.+.+-..+.+++|+..+-. ....+=+|+|.-.+.++-+.+-=+..+|.
T Consensus 98 tgv~p------~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~------~~nLsGMGCsAgliai~lA~~lL~~~p~~ 165 (290)
T PF08392_consen 98 TGVKP------SDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIK------SYNLSGMGCSAGLIAIDLAKDLLQAHPNS 165 (290)
T ss_pred cCCCH------HHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCee------eecccCCcchhhHHHHHHHHHHHHhCCCc
Confidence 89998 999988764 456788889999999986533 22244445555444444332222345677
Q ss_pred EEEEEE
Q 009313 495 RVWQIA 500 (537)
Q Consensus 495 ~Vllia 500 (537)
.+++++
T Consensus 166 ~ALVVs 171 (290)
T PF08392_consen 166 YALVVS 171 (290)
T ss_pred EEEEEE
Confidence 777766
No 273
>TIGR02435 CobG precorrin-3B synthase. An iron-sulfur protein. An oxygen atom from dioxygen is incorporated into the macrocycle at C-20. In the aerobic cobalamin biosythesis pathway, four enzymes are involved in the conversion of precorrin-3A to precorrin-6A. The first of the four steps is carried out by EC 1.14.13.83, precorrin-3B synthase (CobG), yielding precorrin-3B as the product. This is followed by three methylation reactions, which introduce a methyl group at C-17 (CobJ; EC 2.1.1.131), C-11 (CobM; EC 2.1.1.133) and C-1 (CobF; EC 2.1.1.152) of the macrocycle, giving rise to precorrin-4, precorrin-5 and precorrin-6A, respectively.
Probab=27.01 E-value=3.8e+02 Score=28.73 Aligned_cols=91 Identities=14% Similarity=0.120 Sum_probs=48.3
Q ss_pred HHHHHHHHHHcCCceeEEccCCccccccccchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCccEE--EEeccC--C----
Q 009313 159 LDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMVMFGALDELFEKTKVRPKDVGIL--VVNCSI--F---- 230 (537)
Q Consensus 159 ~~f~~~i~~~sGI~~r~~~~~~~~~~p~~~~~ma~~~~ea~~l~~~Aa~~aL~~agi~~~dId~L--I~~ss~--~---- 230 (537)
++.+..+.++.|.++-+..+.-...++.-..+ -.+++.+.|++.|+..+.-+.. +++|.. .
T Consensus 273 l~~la~ia~~~g~~~irlT~~Q~l~i~~i~~~-----------~~~~~~~~l~~~gl~~~~~~~~~~v~aC~G~~~C~~~ 341 (390)
T TIGR02435 273 LRGLAQLAQALGDGDLRLTPWRALLVLGLPPE-----------RADAAQRALAALGLVTSASDPRARIIACTGAPGCASA 341 (390)
T ss_pred HHHHHHHHHHhCCCeEEEcCCcceEEcCCCHH-----------HHHHHHHHHHHCCCCcCCCCCeeeEEECCCccccccc
Confidence 33334567777877766655432222210111 1455666777788765433322 445532 2
Q ss_pred -CCCccHHHHHHHHcCCCCCeeEEEecCccchHH
Q 009313 231 -NPTPSLSAMIINHYKMRGNIISYNLGGMGCSAG 263 (537)
Q Consensus 231 -~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~g 263 (537)
..+-.++..|.+.++-... ..+.++ ||..+
T Consensus 342 ~~~t~~~a~~l~~~~~~~~~-~~i~vS--GC~n~ 372 (390)
T TIGR02435 342 LADTRADAEALAAYCEPTAP-ITVHLS--GCAKG 372 (390)
T ss_pred hhhHHHHHHHHHHHhcccCC-cEEEEe--CCccc
Confidence 2234567788888775422 556666 78654
No 274
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=26.91 E-value=70 Score=34.19 Aligned_cols=45 Identities=11% Similarity=0.107 Sum_probs=30.0
Q ss_pred HHHHHHHHHHhCCCCCCCccEEE-EeccCCCCCccHHHHHHHHcCC
Q 009313 202 MFGALDELFEKTKVRPKDVGILV-VNCSIFNPTPSLSAMIINHYKM 246 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI-~~ss~~~~~Ps~a~~I~~~lGl 246 (537)
+..|.+++|+++|+.|+|||.+= ++||+..---.-+..|.+-|+-
T Consensus 303 a~~am~raL~~Agl~pe~i~YvNAHATST~~GD~aE~~Ai~~vf~~ 348 (440)
T KOG1394|consen 303 AVLAMERALKDAGLSPEDIDYVNAHATSTPLGDAAEAEAIKRVFGE 348 (440)
T ss_pred HHHHHHHHHHHcCCChhhcCeeecccccCcCchHHHHHHHHHHhcc
Confidence 58899999999999999999884 4565432111223345555543
No 275
>KOG1794 consensus N-Acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=26.70 E-value=3.6e+02 Score=28.21 Aligned_cols=112 Identities=10% Similarity=0.031 Sum_probs=61.3
Q ss_pred HHHHHHHHHHhCCCCCCC-ccEEEEecc-CCCCCccHHHHHHHHcC--CCCCeeEEEecCccchHHHHHHHHHHHHHHcC
Q 009313 202 MFGALDELFEKTKVRPKD-VGILVVNCS-IFNPTPSLSAMIINHYK--MRGNIISYNLGGMGCSAGVIGVDLARDMLQAN 277 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~d-Id~LI~~ss-~~~~~Ps~a~~I~~~lG--l~~~~~~~~l~g~gCs~gl~AL~lA~~lL~~g 277 (537)
...+++++++|+|+++++ +-.|.+.-| .+. ++.-..+.+.+. .+..+..|-|.. - ++..+..--..+
T Consensus 49 ie~~i~~A~~k~g~d~~~~lr~lgL~lSg~d~--e~~~~~lv~~~R~~fps~ae~~~v~s-D------a~~sl~a~t~g~ 119 (336)
T KOG1794|consen 49 IEDMIREAKEKAGWDKKGPLRSLGLGLSGTDQ--EDKNRKLVTEFRDKFPSVAENFYVTS-D------ADGSLAAATPGG 119 (336)
T ss_pred HHHHHHHHHhhcCCCccCccceeeeecccCCc--hhHHHHHHHHHHHhccchhheeeeeh-h------HHHHHhhcCCCC
Confidence 367788999999999998 777766533 333 333333333332 222356666662 1 111111111223
Q ss_pred CCCeEEEEEecccccccC-CCCCcCCCccccccccceEEEEEeccC
Q 009313 278 PNNYAVVVSTEMVGYNWY-AGRDRSMMIPNCFFRMGCSAILMSNRR 322 (537)
Q Consensus 278 ~~~~aLVVs~E~~S~~~~-~~~dr~~ll~~~lfgDGAAAvLLs~~~ 322 (537)
.+..||+-++....+-.. +|+...---.....|||+.|.-+++..
T Consensus 120 ~~GiVLiaGTgs~crl~~~DGs~~~~ggwg~~iGd~GSaywia~~A 165 (336)
T KOG1794|consen 120 EGGIVLIAGTGSNCRLVNPDGSEKGAGGWGHMIGDGGSAYWIARQA 165 (336)
T ss_pred CCcEEEEecCCceeEEECCCCCccCCCCCCCccCCCcchhhhhhhh
Confidence 467899999887655222 232221101234679999888776543
No 276
>PLN02854 3-ketoacyl-CoA synthase
Probab=26.64 E-value=1.9e+02 Score=32.60 Aligned_cols=70 Identities=9% Similarity=0.116 Sum_probs=41.9
Q ss_pred cCCCCCCcCccccccEEEEcCC----CHHHHHHHHHHcCCChhhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCC
Q 009313 419 ASTKPYIPDYKLAFEHFCVHAA----SKTVLDELQKNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGD 494 (537)
Q Consensus 419 ~gl~~y~pdf~~did~~~~H~~----g~~vl~~l~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~l~~Gd 494 (537)
+|+++ +|||+++.... .+..--.+++++|+..+-. . ...+-++++.-.+.|+.+..-=+..++.
T Consensus 203 aGi~p------~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~~i~-----a-fdLsgmGCSggl~aL~lA~~lL~~~~~~ 270 (521)
T PLN02854 203 TGVKP------RDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDIK-----S-YNLGGMGCSAGLISIDLANDLLKANPNS 270 (521)
T ss_pred cCCCH------HHCCEEEEECCCCCCCCCHHHHHHHHhCCCCCce-----E-EecccchhhhHHHHHHHHHHHHHhCCCC
Confidence 89998 99999997432 3455567899999975322 1 2244466666677775443211123455
Q ss_pred EEEEEE
Q 009313 495 RVWQIA 500 (537)
Q Consensus 495 ~Vllia 500 (537)
++++++
T Consensus 271 ~aLVVs 276 (521)
T PLN02854 271 YAVVVS 276 (521)
T ss_pred eEEEEE
Confidence 665544
No 277
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=24.92 E-value=68 Score=32.84 Aligned_cols=27 Identities=26% Similarity=0.386 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEe
Q 009313 200 MVMFGALDELFEKTKVRPKDVGILVVN 226 (537)
Q Consensus 200 ~l~~~Aa~~aL~~agi~~~dId~LI~~ 226 (537)
++...|++++++++|+.|.||+++=..
T Consensus 272 dm~~~aa~~l~aksgltpndvqvielh 298 (408)
T KOG1406|consen 272 DMTRLAAKRLFAKSGLTPNDVQVIELH 298 (408)
T ss_pred hHHHHHHHHHHHHcCCCcccceEEEee
Confidence 456889999999999999999988543
No 278
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=24.13 E-value=1.7e+02 Score=31.44 Aligned_cols=58 Identities=12% Similarity=0.180 Sum_probs=42.8
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeccC--CCCC-c-----cHHHHHHHHcCCC
Q 009313 190 TMKHGRLEASMVMFGALDELFEKTKVRPKDVGILVVNCSI--FNPT-P-----SLSAMIINHYKMR 247 (537)
Q Consensus 190 ~ma~~~~ea~~l~~~Aa~~aL~~agi~~~dId~LI~~ss~--~~~~-P-----s~a~~I~~~lGl~ 247 (537)
.+.+...+..++-.+|++++++++|+++++||++=....+ ..|. | .-.+.|+++.|++
T Consensus 61 ~l~~l~~~lg~~~a~av~~~~~~~~l~~~~id~IgsHGQTv~H~P~~~~TlQiG~~~~iA~~tgi~ 126 (365)
T PRK09585 61 RLAELDTALGRLFAEAVNALLAEAGLSPEDIDAIGSHGQTVRHRPGEGFTLQIGDGALIAELTGIT 126 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCccCccEEEeCCcccccCCCCCCeEEcCCHHHHHHHHCcC
Confidence 4555666777888999999999999999999987644322 2221 2 2478899999986
No 279
>PF08745 UPF0278: UPF0278 family; InterPro: IPR022785 This entry contains proteins of the UPF0278 family and proteins containing PIN domains. Members of the UPF0278 family are uncharacterised and about 200 amino acids in length.; PDB: 2LCQ_A.
Probab=22.45 E-value=29 Score=33.96 Aligned_cols=93 Identities=16% Similarity=0.221 Sum_probs=0.0
Q ss_pred EEEeEEeCCCCcccCHHHHHHHHhccCCCChhhHHHHHHHHHHcCCceeEEccCCccccccccchhhhhhhhHHHHHHHH
Q 009313 126 VDFACYRPSDDLKVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLEASMVMFGA 205 (537)
Q Consensus 126 ~~~~~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~p~~~~~ma~~~~ea~~l~~~A 205 (537)
.+++||.|| --.+|+.......+.-.+-..+|..|+..++==.-+...|....+. .-.+|..-......++.+|
T Consensus 41 l~is~YmPp----SVy~El~~fl~~~~~~~e~~~k~~twvv~KsP~ryev~IPA~i~yE--yI~emR~RInKGLRVAEea 114 (205)
T PF08745_consen 41 LGISCYMPP----SVYKELKNFLERNGCDEEVISKLDTWVVKKSPDRYEVKIPAEIFYE--YIEEMRERINKGLRVAEEA 114 (205)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccc----cccccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccc
Confidence 367899997 3345555555443332222234555666555322222233332210 1223433333444555555
Q ss_pred HHHHHHhC---CCCCCCccEEE
Q 009313 206 LDELFEKT---KVRPKDVGILV 224 (537)
Q Consensus 206 a~~aL~~a---gi~~~dId~LI 224 (537)
++++-..+ .+..++||-+|
T Consensus 115 vrea~~~~~~~~~~~~~i~~~I 136 (205)
T PF08745_consen 115 VREAAQETYKEEIEREVIGEII 136 (205)
T ss_dssp ----------------------
T ss_pred cccccccccccccccccccccc
Confidence 55554443 22234555555
No 280
>COG3223 Predicted membrane protein [Function unknown]
Probab=22.33 E-value=1.6e+02 Score=27.03 Aligned_cols=24 Identities=29% Similarity=0.739 Sum_probs=16.4
Q ss_pred chhhhhhhHHHHHHHHHHHHHHHH
Q 009313 47 LKYVKLGYHYLINHAIYLATIPVL 70 (537)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~ 70 (537)
.||.|-|||+-...+.|+....++
T Consensus 76 vkYFks~~HfPLRyfIYiGITAii 99 (138)
T COG3223 76 VKYFKSGFHFPLRYFIYIGITAII 99 (138)
T ss_pred HHHHhcCCCcchHHHHHHHHHHHH
Confidence 378888888777777766655443
No 281
>PRK08329 threonine synthase; Validated
Probab=21.92 E-value=81 Score=33.29 Aligned_cols=34 Identities=24% Similarity=0.218 Sum_probs=29.6
Q ss_pred ccchHHHHHHHHHHcCCCCCCCEEEEEEEchHHH
Q 009313 473 SSSSIWYELAYLEAKERVKRGDRVWQIAFGSGFK 506 (537)
Q Consensus 473 sSaSi~~~La~~~~~g~l~~Gd~VlliafGsG~~ 506 (537)
+|+..+..+..+.++|.+++|++|+++-.|+|+|
T Consensus 312 ssa~a~Aa~~~l~~~g~i~~~~~Vv~~~TG~glK 345 (347)
T PRK08329 312 TSAVALAAYWKLLEEGLIEGGSKVLLPLSGSGLK 345 (347)
T ss_pred cHHHHHHHHHHHHHhCCCCCCCeEEEEeCCCCcc
Confidence 4677778888888899999999999999999986
No 282
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=21.85 E-value=2.2e+02 Score=32.56 Aligned_cols=62 Identities=10% Similarity=0.049 Sum_probs=42.3
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHH
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGV 267 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL 267 (537)
....++++|+++|+++++||.|+..... .-.|.+..+|.+.+|..+ . .+++..-|.+.-.|+
T Consensus 311 ~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~l~~~fg~~~-~--~~~npdeaVA~GAAi 372 (616)
T PRK05183 311 TLLACRRALRDAGVEADEVKEVVMVGGS-TRVPLVREAVGEFFGRTP-L--TSIDPDKVVAIGAAI 372 (616)
T ss_pred HHHHHHHHHHHcCCCcccCCEEEEECCc-ccChHHHHHHHHHhccCc-C--cCCCchHHHHHHHHH
Confidence 4566789999999999999998755321 236889999999998652 2 244433444444444
No 283
>KOG0103 consensus Molecular chaperones HSP105/HSP110/SSE1, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=21.53 E-value=1.8e+02 Score=33.72 Aligned_cols=74 Identities=16% Similarity=0.119 Sum_probs=53.0
Q ss_pred hhhhHHHHHH-------HHHHHHHHhCCCCCCCccEE-EEeccCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHH
Q 009313 194 GRLEASMVMF-------GALDELFEKTKVRPKDVGIL-VVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVI 265 (537)
Q Consensus 194 ~~~ea~~l~~-------~Aa~~aL~~agi~~~dId~L-I~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~ 265 (537)
.|+|.++++. .-..++|+++++..+||+.+ |++.++ ..|.+-.+|...+|=. -..++|.+ -|.+-..
T Consensus 301 ~ReEfEel~~plL~rv~~p~~~~l~d~~l~~edi~~VEiVGg~s--ripaike~Is~~Fgke-~s~TlN~d--EavarG~ 375 (727)
T KOG0103|consen 301 KREEFEELSAPLLERVEVPLLKALADAKLKVEDIHAVEIVGGLS--RIPAIKEMISDFFGKE-LSRTLNQD--EAVARGA 375 (727)
T ss_pred cHHHHHHHHHHHHHhhhHHHHHHHHHhcCccccceeEEEecCcc--cchHHHHHHHHHhCCc-ccccccHH--HHHHHhH
Confidence 4666666644 44667899999999999998 455432 3689999999999965 23444444 7888888
Q ss_pred HHHHHHH
Q 009313 266 GVDLARD 272 (537)
Q Consensus 266 AL~lA~~ 272 (537)
||+.|--
T Consensus 376 ALqcAIl 382 (727)
T KOG0103|consen 376 ALQCAIL 382 (727)
T ss_pred HHHHHhc
Confidence 8877754
No 284
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=21.39 E-value=2.2e+02 Score=30.70 Aligned_cols=24 Identities=8% Similarity=0.313 Sum_probs=21.1
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEe
Q 009313 203 FGALDELFEKTKVRPKDVGILVVN 226 (537)
Q Consensus 203 ~~Aa~~aL~~agi~~~dId~LI~~ 226 (537)
.++++++|+++|++|+|||.+...
T Consensus 284 ~~a~~~Al~~Agi~~~dId~v~~h 307 (410)
T PRK07103 284 MRVIRAALRRAGLGPEDIDYVNPH 307 (410)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEcc
Confidence 578999999999999999987643
No 285
>PLN03184 chloroplast Hsp70; Provisional
Probab=21.11 E-value=2.4e+02 Score=32.78 Aligned_cols=63 Identities=10% Similarity=0.072 Sum_probs=43.2
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHH
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVD 268 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~ 268 (537)
....++++|++++++++|||.|+..... .-+|.+-.+|.+.+|.. ....++..-|.+--.|+.
T Consensus 348 ~~~~i~~~L~~a~~~~~dId~ViLvGGs-sriP~V~~~i~~~fg~~---~~~~~npdeaVA~GAAi~ 410 (673)
T PLN03184 348 CKTPVENALRDAKLSFKDIDEVILVGGS-TRIPAVQELVKKLTGKD---PNVTVNPDEVVALGAAVQ 410 (673)
T ss_pred HHHHHHHHHHHcCCChhHccEEEEECCc-cccHHHHHHHHHHhCCC---cccccCcchHHHHHHHHH
Confidence 4556788999999999999998765322 23799999999999864 234455444554444443
No 286
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=20.78 E-value=2.2e+02 Score=32.89 Aligned_cols=64 Identities=9% Similarity=0.151 Sum_probs=42.7
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHH
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVD 268 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~ 268 (537)
....++++|+++++++++||.|+.... ..-.|.+-.+|.+.||-+. ...+++..-|.+.-.|+.
T Consensus 315 ~~~~i~~~L~~a~~~~~~i~~ViLvGG-ssriP~v~~~i~~~f~~~~--~~~~~npdeaVA~GAa~~ 378 (653)
T PTZ00009 315 TLQPVEKVLKDAGMDKRSVHEVVLVGG-STRIPKVQSLIKDFFNGKE--PCKSINPDEAVAYGAAVQ 378 (653)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEECC-CCCChhHHHHHHHHhCCCC--CCCCCCcchHHhhhhhhh
Confidence 345688999999999999998875532 1246888899999997431 233444344554444444
No 287
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=20.11 E-value=2.4e+02 Score=32.72 Aligned_cols=62 Identities=8% Similarity=0.038 Sum_probs=43.0
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHH
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVN-CSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVD 268 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~-ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~ 268 (537)
....++++|+++|+++++||.||.. .++ -+|.+-.+|.+.||..+ . .+++-.-|.+--.|+.
T Consensus 336 ~~~~v~~~L~~a~~~~~dId~VvLVGGss--riP~V~~~l~~~fg~~~-~--~~~nPdeaVA~GAAi~ 398 (657)
T PTZ00186 336 SIAPCKQCMKDAGVELKEINDVVLVGGMT--RMPKVVEEVKKFFQKDP-F--RGVNPDEAVALGAATL 398 (657)
T ss_pred HHHHHHHHHHHcCCChhhCCEEEEECCcc--cChHHHHHHHHHhCCCc-c--ccCCCchHHHHhHHHH
Confidence 4556788999999999999988754 332 36889999999998652 2 3445445555444443
No 288
>TIGR02350 prok_dnaK chaperone protein DnaK. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.
Probab=20.04 E-value=2.1e+02 Score=32.37 Aligned_cols=63 Identities=5% Similarity=0.102 Sum_probs=42.8
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCccHHHHHHHHcCCCCCeeEEEecCccchHHHHHHH
Q 009313 202 MFGALDELFEKTKVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNIISYNLGGMGCSAGVIGVD 268 (537)
Q Consensus 202 ~~~Aa~~aL~~agi~~~dId~LI~~ss~~~~~Ps~a~~I~~~lGl~~~~~~~~l~g~gCs~gl~AL~ 268 (537)
....++++|+++|+++++||.|+..... .-.|.+-..|.+.+|.+ ...+++..-|.+--.|+.
T Consensus 307 ~~~~i~~~l~~a~~~~~~i~~V~LvGGs-sriP~v~~~i~~~f~~~---~~~~~~pdeava~GAa~~ 369 (595)
T TIGR02350 307 TKEPVRQALKDAGLSASDIDEVILVGGS-TRIPAVQELVKDFFGKE---PNKSVNPDEVVAIGAAIQ 369 (595)
T ss_pred HHHHHHHHHHHcCCCHhHCcEEEEECCc-ccChHHHHHHHHHhCCc---ccCCcCcHHHHHHHHHHH
Confidence 4667788999999999999988755322 23799999999999843 223444344544444443
Done!